BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009143
(542 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L6Y3|PP396_ARATH Pentatricopeptide repeat-containing protein At5g24830
OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1
Length = 593
Score = 541 bits (1394), Expect = e-153, Method: Compositional matrix adjust.
Identities = 286/578 (49%), Positives = 380/578 (65%), Gaps = 46/578 (7%)
Query: 1 MALFIACGESSSPVHIQILRFLYQTFDSIKLNVAR----IFSNSRTCSDDDNLPCTLNDI 56
MAL I+CGE +S + R L Q+ D + NV+R IF+N R + L C +
Sbjct: 1 MALLISCGEVTSS-QFTVFRLLNQSLDFVSDNVSRLLAPIFTNLR--DFEMRLSC-IERP 56
Query: 57 MSYVGDQCRSKTRHWFSN-KDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLE 115
S G+ T WFS+ KD D + +P+A+FN LD ILK +LDRL ++R++ V T
Sbjct: 57 PSISGNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRES--VCQTKS 114
Query: 116 TDY----RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
DY H +++RDLCL GK+ ALWLR+KMI G +P ++THN+L+N LCK G +EK
Sbjct: 115 FDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEK 174
Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
AD ++REM EM PSPNC +YN I G C VN +DKAL+LF+TM GIRPNRVT NI+VH
Sbjct: 175 ADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVH 234
Query: 232 ALCKKGLLGDA-VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
ALC+KG++G+ K L E+L A D++ TILMDS FKNG+ QAL +W +M QK
Sbjct: 235 ALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQK 294
Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
N+ D V YNV+I G C +G++ +A+ + C M+KRG PDV TYNTL++ LCK+GK DEA
Sbjct: 295 NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEA 354
Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
+G + GVAPDQISYK IIQGLCIHGD+ +A EFLLSML+ S++PE +WNV+IDG
Sbjct: 355 CDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 414
Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR---------------------- 448
YGR GD S+A S+ +LMLS+GV NV+T NALI +
Sbjct: 415 YGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD 474
Query: 449 --------GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 500
GA+C LGH+ LA QLYDEMLRRG PDIITYTEL++G C +G +K+AE + +
Sbjct: 475 TTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLS 534
Query: 501 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 538
+IQ G+ IDH+PF IL K+Y R++ +A +++KWL
Sbjct: 535 RIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWL 572
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 206/383 (53%), Gaps = 8/383 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I L L K A+ L +M+ KG PD++T+ +VN LCK GD + A +++ +M + +
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P YN I G C+ +D AL+LF M GIRPN VT++ L+ LC G DA
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ L +++ + K DV T + L+D++ K G +A L+++M +++I IV Y+ LI
Sbjct: 312 RLLSDMI---ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
NGFC++ + A F M+ + PDV+TYNTL+ CK +++E + +S+ G+
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
+ ++Y +IQGL GD A+E M+ V P +N ++DG + G L A +
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 483
+ + + ++T+N +I C G + L+ + +G+ PD++ Y +I
Sbjct: 489 FEYLQRSKMEPTIYTYNIMI-----EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543
Query: 484 KGHCARGNMKEAEEVFAKIQTLG 506
G C +G+ +EA+ +F +++ G
Sbjct: 544 SGFCRKGSKEEADALFKEMKEDG 566
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 189/380 (49%), Gaps = 8/380 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I C ++ AL + KM++ G P+++T + L+N C + +A ++ +M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
PN T+N I G N+ +A+ L M G +P+ VT+ ++V+ LCK+G A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
L ++ + GK V+ ++D K AL L+ +M K I+ ++V Y+ LI
Sbjct: 242 NLLNKM---EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+ C G S A M++R PDV T++ L++ K+GKL EA Y + K +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
P ++Y ++I G C+H + +A++ M+ K P+ +N +I G+ + + +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 483
M G+ N T+N LI + C+ +A +++ EM+ G+ P+I+TY L+
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCD-----MAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 484 KGHCARGNMKEAEEVFAKIQ 503
G C G +++A VF +Q
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQ 493
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 208/422 (49%), Gaps = 10/422 (2%)
Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
DYR ++ R+ K+ A+ L +M++ P ++ + L++ + K+ + +
Sbjct: 47 DYREKLS--RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLG 104
Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
+M + N TY+ I +CR ++L AL + M G PN VT + L++ C
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
+ +AV + ++ + +T L+ F + +A+AL + M K Q D+
Sbjct: 165 KRISEAVALVDQMFVTG---YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
V Y V++NG C GD AF +M + P V+ YNT+++ LCK +D+A + +
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
+ G+ P+ ++Y ++I LC +G A L M+E+ + P+ ++ +ID + + G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDI 476
L A + D M+ + ++ T+++LI C + A Q+++ M+ + PD+
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLI-----NGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 477 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
+TY LIKG C ++E EVF ++ GL + + + IL + + + D A++I ++
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 537 WL 538
+
Sbjct: 457 MV 458
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 152/318 (47%), Gaps = 3/318 (0%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ ++I LC G+ A L MI++ PDV T + L++ K G L +A+ + EM
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ P+ TY++ I G+C + LD+A +F M + P+ VT+N L+ CK +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+ ++ E+ + +T IL+ F+ GD A ++ +M + +I+ YN
Sbjct: 414 EGMEVFREM---SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
L++G C NG + A F + + P + TYN ++ +CK GK+++ + LS
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
GV PD ++Y T+I G C G +A M E +P +N +I R GD +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 421 FSIRDLMLSFGVSSNVFT 438
+ M S G + + T
Sbjct: 591 AELIKEMRSCGFAGDAST 608
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
V+ +++ + ++I C+ ++ A + M+ K PDV+T+N L+ CK +
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
E+ V REMS+ N TYN I G + + D A +F M ++G+ PN +T+N L
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ LC KNG +A+ ++ + +
Sbjct: 473 LDGLC--------------------------------------KNGKLEKAMVVFEYLQR 494
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
++ I YN++I G C G + + FC + +G PDV+ YNT+++ C++G +E
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
A + + + G P+ Y T+I+ GD + E + M
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 141/303 (46%), Gaps = 8/303 (2%)
Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
L DAV GE++ + +I + L+ + K ++L M I +
Sbjct: 62 LDDAVALFGEMVKS---RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
Y++LIN FC + A A +M+K G+ P+++T ++LLN C ++ EA +
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
TG P+ +++ T+I GL +H +A + M+ K P+ + V+++G + GD
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIIT 478
AF++ + M + V +N +I C H+ AL L+ EM +GI P+++T
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTII-----DGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 479 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 538
Y+ LI C G +A + + + + D F L + + + +A ++ + +
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 539 LRN 541
R+
Sbjct: 354 KRS 356
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 4/234 (1%)
Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
D + +I+ C ++ + + R+M Q+G V + +T+N L+ L + GD + A +
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
+EM PN TYN + G C+ +L+KA+ +F + + + P T+NI++ +CK
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
G + D + DV+ ++ + + G K +A AL+ +M + +
Sbjct: 515 GKVEDGWDLFCNLSLKG---VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
YN LI +GD ++ +M GF D T + N L G+LD++
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 624
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
R +E + +I +C GK+ L + KG PDV+ +N +++ C+ G E
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
+AD + +EM E PN YN I R + + + L M + G + T ++
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 613
Query: 231 HAL 233
+ L
Sbjct: 614 NML 616
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 224/448 (50%), Gaps = 43/448 (9%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
VI +C G+I A L M KG PDV++++ +VN C+ G+L+K +I M
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
PN Y + I CR+ +L +A FS M GI P+ V + L+ CK+G + A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD-------- 295
KF E+ + D T DV+T T ++ + + GD +A L+++MF K ++ D
Sbjct: 372 KFFYEMHSRD---ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 296 ---------------------------IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
+V Y LI+G C GD+ SA +M K G
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
P++ TYN+++N LCK G ++EA G G+ D ++Y T++ C G++ KA+E
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
L ML K + P +NV+++G+ G L + + + ML+ G++ N TFN+L+
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV----- 603
Query: 449 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 508
C ++ A +Y +M RG+ PD TY L+KGHC NMKEA +F +++ G +
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 509 IDHIPFRILKKRYRRMKESDKARDIHQK 536
+ + +L K + + K+ +AR++ +
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 165/333 (49%), Gaps = 3/333 (0%)
Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
D + A+I C G + A L +M KG PD +T L+N CK G ++ A V
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
M + SPN TY I G C+ +LD A L M G++PN T+N +V+ LCK
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
G + +AVK +GE A +D +T T LMD+Y K+G+ +A + +M K +Q I
Sbjct: 505 GNIEEAVKLVGEFEA---AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
V +NVL+NGFCL+G + ML +G P+ T+N+L+ C + L A+ Y
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
+ GV PD +Y+ +++G C ++ +A M K ++V+I G+ +
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
A + D M G++++ F+ + +G
Sbjct: 682 FLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 714
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 212/435 (48%), Gaps = 25/435 (5%)
Query: 121 HVAVI-RDLCLGGKIGTALWLRRKM-IQKGTVP--DVLTHNY------------LVNELC 164
H+AV +DL + + ++ W R K+ + V D+L + Y L
Sbjct: 127 HLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLV 186
Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCR-VNELDKALHLFSTMANNGIRPNR 223
G L +A V +M + + N ++T + + A+ +F G+ N
Sbjct: 187 DFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNV 246
Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
++NI++H +C+ G + +A L +L + G T DVI+ + +++ Y + G+ + L
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLL--LLMELKG-YTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
M +K ++ + Y +I C ++ A F +M+++G LPD + Y TL++ CK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
+G + AS F+ + + PD ++Y II G C GD+V+A + M K + P+
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQL 463
+ +I+GY + G + +AF + + M+ G S NV T+ LI C G + A +L
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI-----DGLCKEGDLDSANEL 478
Query: 464 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 523
EM + G+ P+I TY ++ G C GN++EA ++ + + GL D + + L Y +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 524 MKESDKARDIHQKWL 538
E DKA++I ++ L
Sbjct: 539 SGEMDKAQEILKEML 553
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 221/407 (54%), Gaps = 10/407 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I L L K A+ L +M+ +G PD+ T+ +VN LCK GD++ A ++++M + +
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
+ Y I C ++ AL+LF+ M N GIRPN VT+N L+ LC G DA
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ L +++ + K +V+T + L+D++ K G +A L+++M +++I DI Y+ LI
Sbjct: 311 RLLSDMI---ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
NGFC++ + A F M+ + P+V+TYNTL+ CK +++E + +S+ G+
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
+ ++Y T+IQGL GD A++ M+ V P+ +++++DG + G L A +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 483
+ + + +++T+N +I C G + L+ + +G+ P++I YT +I
Sbjct: 488 FEYLQKSKMEPDIYTYNIMI-----EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 484 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 530
G C +G +EA+ +F +++ G + + L + R+++ DKA
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR--ARLRDGDKA 587
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 208/422 (49%), Gaps = 10/422 (2%)
Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
DYR ++ R++ L K+ A+ L +M+Q +P ++ N L++ + K+ + +
Sbjct: 46 DYREKLS--RNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLG 103
Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
M +R S + +YN I +CR ++L AL + M G P+ VT + L++ C
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
+ +AV + ++ + + +T L+ F + +A+AL + M + Q D+
Sbjct: 164 KRISEAVALVDQMFVME---YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 220
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
Y ++NG C GDI A + +M K DV+ Y T+++ LC +++A + +
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
+ G+ P+ ++Y ++I+ LC +G A L M+E+ + P ++ +ID + + G
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDI 476
L A + D M+ + ++FT+++LI C + A +++ M+ + P++
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLI-----NGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 477 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
+TY LIKG C ++E E+F ++ GL + + + L + + + D A+ I +K
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 537 WL 538
+
Sbjct: 456 MV 457
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 177/370 (47%), Gaps = 8/370 (2%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E D + +I LC + AL L +M KG P+V+T+N L+ LC G A
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ +M E + +PN T++A I + + +L +A L+ M I P+ T++ L++
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
C L D K + E++ D +V+T L+ + K + + L+ +M Q+ +
Sbjct: 371 CMHDRL-DEAKHMFELMISKD--CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
+ V YN LI G GD A F +M+ G PD+ITY+ LL+ LCK GKL++A
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ L K+ + PD +Y +I+G+C G + + S+ K V P I+ +I G+ R
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGIT 473
G A ++ M G N T+N LI A R G + +L EM G
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD-----GDKAASAELIKEMRSCGFV 602
Query: 474 PDIITYTELI 483
D T + +I
Sbjct: 603 GDASTISMVI 612
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 145/287 (50%), Gaps = 3/287 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A+I GK+ A L +MI++ PD+ T++ L+N C L++A H+ M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
PN TYN I G+C+ +++ + LF M+ G+ N VT+N L+ L + G A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
K ++++D D+IT +IL+D K G +AL ++ + + ++ DI YN++
Sbjct: 450 QKIFKKMVSDG---VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I G C G + + FC + +G P+VI Y T+++ C++G +EA + + + G
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
P+ +Y T+I+ GD + E + M V + +++I+
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 205/384 (53%), Gaps = 8/384 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
VI C ++ AL + KM++ G PD +T LVN C+ + A ++ +M E+
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ YNA I C+ ++ A F + GIRPN VT+ LV+ LC DA
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ L +++ K T +VIT + L+D++ KNG +A L+ +M + +I DIV Y+ LI
Sbjct: 246 RLLSDMIKK---KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
NG CL+ I A F M+ +G L DV++YNTL+N CK ++++ + +S+ G+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
+ ++Y T+IQG GD+ KA+EF M + P+ +N+++ G G+L A I
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 483
+ M + ++ T+ +I RG C G + A L+ + +G+ PDI+TYT ++
Sbjct: 423 FEDMQKREMDLDIVTYTTVI----RGM-CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 484 KGHCARGNMKEAEEVFAKIQTLGL 507
G C +G + E E ++ K++ GL
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGL 501
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 212/424 (50%), Gaps = 13/424 (3%)
Query: 91 DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
D+ L + +D M + P + D+ R ++ I L K + L +KM G
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIV--DFNRLLSAIVKL---KKYDVVISLGKKMEVLGIR 117
Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
D+ T N ++N C + A ++ +M ++ P+ T + + G+CR N + A+ L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
M G +P+ V +N ++ +LCK + DA F E+ + +V+T T L++
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNG 234
Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
+ A L +DM +K I +++ Y+ L++ F NG + A F +M++ PD
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
++TY++L+N LC ++DEA+ + ++ G D +SY T+I G C + +
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGA 450
M ++ +V +N +I G+ + GD+ A M FG+S +++T+N L+ G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL-----GG 409
Query: 451 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 510
C+ G + AL ++++M +R + DI+TYT +I+G C G ++EA +F + GL D
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 511 HIPF 514
+ +
Sbjct: 470 IVTY 473
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 177/349 (50%), Gaps = 8/349 (2%)
Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
L A + +M + RP P+ +N ++ ++ + D + L M GIR + T NI
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
+++ C + A+ LG++L D +T L++ + + A++L + M
Sbjct: 126 VINCFCCCFQVSLALSILGKMLK---LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
+ + DIVAYN +I+ C ++ AF +F ++ ++G P+V+TY L+N LC +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
+A+ + K + P+ I+Y ++ +G +++A+E M+ S+ P+ ++ +I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEML 468
+G + A + DLM+S G ++V ++N LI C + ++L+ EM
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI-----NGFCKAKRVEDGMKLFREMS 357
Query: 469 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 517
+RG+ + +TY LI+G G++ +A+E F+++ G++ D + IL
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 136/260 (52%), Gaps = 3/260 (1%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ A++ LC + A L MI+K P+V+T++ L++ K G + +A + EM
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
M P+ TY++ I G C + +D+A +F M + G + V++N L++ CK +
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
D +K E+ S+ +T L+ +F+ GD +A ++ M I DI YN
Sbjct: 348 DGMKLFREM---SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
+L+ G C NG++ A F M KR D++TY T++ +CK GK++EA + LS
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 361 GVAPDQISYKTIIQGLCIHG 380
G+ PD ++Y T++ GLC G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKG 484
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 180/376 (47%), Gaps = 18/376 (4%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
+ D + A+I LC ++ A +++ +KG P+V+T+ LVN LC A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
++ +M + + +PN TY+A + + + ++ +A LF M I P+ VT++ L++ LC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
+ +A + +++ +DV++ L++ + K + L+ +M Q+ + +
Sbjct: 307 LHDRIDEANQMFDLMVSKG---CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
+ V YN LI GF GD+ A +F QM G PD+ TYN LL LC G+L++A +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
+ K + D ++Y T+I+G+C G + +A S+ K + P+ + ++ G
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITP 474
G L ++ M G+ N T + G I L+ +L +ML G P
Sbjct: 484 GLLHEVEALYTKMKQEGLMKNDCTLSD-------------GDITLSAELIKKMLSCGYAP 530
Query: 475 DIITYTELIKGHCARG 490
++ ++ G C +
Sbjct: 531 SLL--KDIKSGVCKKA 544
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 132/290 (45%), Gaps = 46/290 (15%)
Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
VR +++ D + ++I LCL +I A + M+ KG + DV+++N L+N CK +
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
E + REMS+ N TYN I G+ + ++DKA FS M GI P+ T+NIL
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ LC NG+ +AL ++ DM +
Sbjct: 407 LGGLC--------------------------------------DNGELEKALVIFEDMQK 428
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
+ + DIV Y +I G C G + A++ FC + +G PD++TY T+++ LC +G L E
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
Y + + G+ + + GDI + E + ML P
Sbjct: 489 VEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAP 530
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 156/343 (45%), Gaps = 47/343 (13%)
Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
+L+ A+ LFS M + P+ V N L+ A+ K DV+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL--------------------KKYDVV 104
Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
S G K + L + ND++ +N++IN FC +S A + +M
Sbjct: 105 ISL---------GKKMEVLGIRNDLY---------TFNIVINCFCCCFQVSLALSILGKM 146
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
LK G+ PD +T +L+N C++ ++ +A + + G PD ++Y II LC +
Sbjct: 147 LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 206
Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
A +F + K + P + +++G S+A + M+ ++ NV T++AL
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 443 ILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 502
+ A + G + A +L++EM+R I PDI+TY+ LI G C + EA ++F +
Sbjct: 267 LDAFVKN-----GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 503 QTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 541
+ G D + + L + + K + R++ Q+ L+ N
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 204/395 (51%), Gaps = 8/395 (2%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I LCL G++ AL L +M++ G PD +T+ ++N LCK G+ A + R+M E
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ Y+ I C+ D AL LF+ M GI+ + VT++ L+ LC G D
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
K L E++ + DV+T + L+D + K G +A L+N+M + I D + YN L
Sbjct: 300 AKMLREMIGRN---IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I+GFC + A F M+ +G PD++TY+ L+N CK ++D+ + +S G+
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
P+ I+Y T++ G C G + A+E M+ + V P + +++DG G+L+ A
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 482
I + M ++ + +N +I CN + A L+ + +G+ PD++TY +
Sbjct: 477 IFEKMQKSRMTLGIGIYNIII-----HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 483 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 517
I G C +G++ EA+ +F K++ G D + IL
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 207/403 (51%), Gaps = 12/403 (2%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E D +I C K+ A + + + G PD +T + LVN C G + +A
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ M EM+ P+ T + I G C + +AL L M G +P+ VT+ +++ L
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
CK G A+ ++ ++ + V+ +I++DS K+G AL+L+N+M K I+
Sbjct: 221 CKSGNSALALDLFRKM---EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
D+V Y+ LI G C +G +M+ R +PDV+T++ L++ K+GKL EA
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
Y + G+APD I+Y ++I G C + +A + M+ K P+ ++++I+ Y +
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGIT 473
+ + + + S G+ N T+N L+L C G ++ A +L+ EM+ RG+
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVL-----GFCQSGKLNAAKELFQEMVSRGVP 452
Query: 474 PDIITYTELIKGHCARGNMKEAEEVFAKIQ----TLGLAIDHI 512
P ++TY L+ G C G + +A E+F K+Q TLG+ I +I
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 184/364 (50%), Gaps = 8/364 (2%)
Query: 120 RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
++ VI LC G AL L +M KG DV+T++ L+ LC G + ++REM
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
P+ T++A I + + +L +A L++ M GI P+ +T+N L+ CK+ L
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
+A + +++ D++T +IL++SY K + L+ ++ K + + + Y
Sbjct: 367 HEANQMFDLMVSKG---CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
N L+ GFC +G +++A F +M+ RG P V+TY LL+ LC G+L++A + + K
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
+ + Y II G+C + A S+ +K V P+ +NV+I G + G LS
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITY 479
A + M G + + FT+N LI A G+ G I +++L +EM G + D T
Sbjct: 544 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGS----GLIS-SVELIEEMKVCGFSADSSTI 598
Query: 480 TELI 483
+I
Sbjct: 599 KMVI 602
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 196/408 (48%), Gaps = 8/408 (1%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K+ A+ L MIQ +P + N L + + + + + M + T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
I YCR +L A + G P+ +T + LV+ C +G + +AV + ++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV-- 167
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
+ K D++T + L++ G +AL L + M + Q D V Y ++N C +G+
Sbjct: 168 -EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
+ A F +M +R V+ Y+ +++ LCK G D+A + + G+ D ++Y ++
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I GLC G + L M+ ++++P+ ++ +ID + + G L A + + M++ G+
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 433 SSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 492
+ + T+N+LI C +H A Q++D M+ +G PDI+TY+ LI +C +
Sbjct: 347 APDTITYNSLI-----DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 493 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 540
+ +F +I + GL + I + L + + + + A+++ Q+ + R
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 166/330 (50%), Gaps = 3/330 (0%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
++ D + ++I LC GK + R+MI + +PDV+T + L++ K G L +A
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+ EM +P+ TYN+ I G+C+ N L +A +F M + G P+ VT++IL+++
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
CK + D ++ E+ + + IT L+ + ++G A L+ +M + +
Sbjct: 396 CKAKRVDDGMRLFREISSKG---LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
+V Y +L++G C NG+++ A F +M K + YN +++ +C K+D+A
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ LS GV PD ++Y +I GLC G + +A M E P+ +N++I +
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 572
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
L ++ + + M G S++ T +I
Sbjct: 573 GSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 4/236 (1%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
E D + +I C ++ + L R++ KG +P+ +T+N LV C+ G L A
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
+ +EM P+ TY + G C EL+KAL +F M + + +NI++H +C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
+ DA + D DV+T +++ K G +A L+ M +
Sbjct: 502 NASKVDDAWSLFCSL---SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
D YN+LI + S+ +M GF D T +++ L + +LD++
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR-RLDKS 613
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 5/140 (3%)
Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLAL 461
+ ++I+ Y R L AFS+ G + TF+ L+ C G + A+
Sbjct: 106 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV-----NGFCLEGRVSEAV 160
Query: 462 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 521
L D M+ PD++T + LI G C +G + EA + ++ G D + + + R
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 522 RRMKESDKARDIHQKWLLRN 541
+ S A D+ +K RN
Sbjct: 221 CKSGNSALALDLFRKMEERN 240
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 215/394 (54%), Gaps = 10/394 (2%)
Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
A+ L +M+ KG PD++T+ +VN LCK GD++ A ++++M + + P YN I
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIID 264
Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
C ++ AL+LF+ M N GIRPN VT+N L+ LC G DA + L +++ + K
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI---ERK 321
Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
+V+T + L+D++ K G +A L+++M +++I DI Y+ LINGFC++ + A
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
F M+ + P+V+TYNTL+ CK ++DE + +S+ G+ + ++Y T+I G
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
+ A+ M+ V+P+ +++++DG G + A + + + + ++
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 437 FTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 496
+T+N +I C G + L+ + +G+ P+++TYT ++ G C +G +EA+
Sbjct: 502 YTYNIMI-----EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 497 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 530
+F +++ G D + L + + +++ DKA
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAH--LRDGDKA 588
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 216/436 (49%), Gaps = 17/436 (3%)
Query: 104 MRDTGPVRCTLETDYRR-HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNE 162
+RD VR DYR+ + + DL K+ A+ L M++ P ++ + L++
Sbjct: 39 VRDFSGVR----YDYRKISINRLNDL----KLDDAVNLFGDMVKSRPFPSIVEFSKLLSA 90
Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
+ K+ + + +M + S N TY+ I +CR ++L AL + + M G P+
Sbjct: 91 IAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPD 150
Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
VT N L++ C + DAV +G+++ + D T L+ F++ +A+A
Sbjct: 151 IVTLNSLLNGFCHGNRISDAVSLVGQMV---EMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
L + M K Q D+V Y +++NG C GDI A + +M + P V+ YNT+++ LC
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
+++A + + + G+ P+ ++Y ++I+ LC +G A L M+E+ + P
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQ 462
++ +ID + + G L A + D M+ + ++FT+++LI C + A
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI-----NGFCMHDRLDEAKH 382
Query: 463 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 522
+++ M+ + P+++TY LIKG C + E E+F ++ GL + + + L +
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Query: 523 RMKESDKARDIHQKWL 538
+ +E D A+ + ++ +
Sbjct: 443 QARECDNAQIVFKQMV 458
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 136/270 (50%), Gaps = 3/270 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A+I GK+ A L +MI++ PD+ T++ L+N C L++A H+ M
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
PN TYN I G+C+ +D+ + LF M+ G+ N VT+ L+H + +A
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
++++D D++T +IL+D NG AL ++ + + ++ DI YN++
Sbjct: 451 QIVFKQMVSDG---VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I G C G + + FC + +G P+V+TY T+++ C++G +EA + + + G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSM 392
PD +Y T+I+ GD + E + M
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 37/304 (12%)
Query: 82 NPQAV-FNAL-DLILKEN-LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
NP V F+AL D +KE L + + D ++ +++ D + ++I C+ ++ A
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
+ MI K P+V+T+N L+ CK +++ + REMS+ N TY I G+
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV---KFLGEVLADDD- 254
+ E D A +F M ++G+ P+ +T++IL+ LC G + A+ ++L + D
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 255 -------------GKAT---------------SDVITSTILMDSYFKNGDKFQALALWND 286
GK +V+T T +M + + G K +A AL+ +
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
M ++ D YN LI +GD +++ +M F+ D T + N L G+
Sbjct: 562 MKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML-HDGR 620
Query: 347 LDEA 350
LD++
Sbjct: 621 LDKS 624
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 211/384 (54%), Gaps = 8/384 (2%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I L L K A+ L +M+Q+G PD++T+ +VN LCK GD++ A ++++M +
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ + YN I G C+ +D AL+LF+ M N GIRP+ T++ L+ LC G DA
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ L +++ + K +V+T + L+D++ K G +A L+++M +++I DI Y+ L
Sbjct: 313 SRLLSDMI---ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
INGFC++ + A F M+ + P+V+TY+TL+ CK +++E + +S+ G+
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
+ ++Y T+I G D A+ M+ V P +N+++DG + G L+ A
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 489
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 482
+ + + + +++T+N +I C G + +L+ + +G++P++I Y +
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMI-----EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544
Query: 483 IKGHCARGNMKEAEEVFAKIQTLG 506
I G C +G+ +EA+ + K++ G
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDG 568
Score = 182 bits (462), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 201/422 (47%), Gaps = 8/422 (1%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
E D +++ C +I A+ L +M++ G PD T L++ L +A
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
++ +M + P+ TY + G C+ ++D AL L M I + V +N ++ LC
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
K + DA+ E+ D+ DV T + L+ G A L +DM ++ I
Sbjct: 270 KYKHMDDALNLFTEM---DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
++V ++ LI+ F G + A + +M+KR PD+ TY++L+N C +LDEA H +
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
++ P+ ++Y T+I+G C + + E M ++ +V + +I G+ +
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITP 474
D NA + M+S GV N+ T+N L+ C G + A+ +++ + R + P
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILL-----DGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 475 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 534
DI TY +I+G C G +++ E+F + G++ + I + + + R ++A +
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 535 QK 536
+K
Sbjct: 562 KK 563
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 204/406 (50%), Gaps = 8/406 (1%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K+ A+ L M++ P ++ N L++ + K+ E + +M + S + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
FI +CR ++L AL + + M G P+ VT + L++ C + DAV + +++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV-- 180
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
+ D T T L+ F + +A+AL + M Q+ Q D+V Y ++NG C GDI
Sbjct: 181 -EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A + +M K DV+ YNT+++ LCK +D+A + + + G+ PD +Y ++
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I LC +G A L M+E+ + P ++ +ID + + G L A + D M+ +
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 433 SSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 492
++FT+++LI C + A +++ M+ + P+++TY+ LIKG C +
Sbjct: 360 DPDIFTYSSLI-----NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 493 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 538
+E E+F ++ GL + + + L + + ++ D A+ + ++ +
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 175/365 (47%), Gaps = 8/365 (2%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E D + +I LC + AL L +M KG PDV T++ L++ LC G A
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ +M E + +PN T++A I + + +L +A L+ M I P+ T++ L++
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
C L D K + E++ D +V+T + L+ + K + + L+ +M Q+ +
Sbjct: 374 CMHDRL-DEAKHMFELMISKD--CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
+ V Y LI+GF D +A F QM+ G P+++TYN LL+ LCK GKL +A
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ L ++ + PD +Y +I+G+C G + E ++ K V P +N +I G+ R
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGIT 473
G A S+ M G N T+N LI A R G + +L EM G
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD-----GDREASAELIKEMRSCGFA 605
Query: 474 PDIIT 478
D T
Sbjct: 606 GDAST 610
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 42/314 (13%)
Query: 82 NPQAV-FNAL-DLILKEN-LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
NP V F+AL D +KE L + + D ++ +++ D + ++I C+ ++ A
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
+ MI K P+V+T++ L+ CK +E+ + REMS+ N TY I G+
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
+ + D A +F M + G+ PN +T+NIL+ LCK G L
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA------------------ 485
Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
+A+ ++ + + ++ DI YN++I G C G + +
Sbjct: 486 --------------------KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
FC + +G P+VI YNT+++ C++G +EA + + G P+ +Y T+I+
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Query: 379 HGDIVKAREFLLSM 392
GD + E + M
Sbjct: 586 DGDREASAELIKEM 599
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 6/231 (2%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ +I+ C ++ + L R+M Q+G V + +T+ L++ + D + A V ++M
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ PN TYN + G C+ +L KA+ +F + + + P+ T+NI++ +CK G +
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 241 DAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
D E+ + K S +VI ++ + + G K +A +L M + + Y
Sbjct: 521 DG----WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
N LI +GD ++ +M GF D T + N L G+LD++
Sbjct: 577 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 626
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
R T+E D + +I +C GK+ L + KG P+V+ +N +++ C+ G E
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
+AD ++++M E P PN TYN I R + + + L M + G + T ++
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 615
Query: 231 HAL 233
+ L
Sbjct: 616 NML 618
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 220/421 (52%), Gaps = 14/421 (3%)
Query: 114 LETDYR----RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
+E YR +I L L K A+ L +M+Q+G P+++T+ +VN LCK GD
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
+ A +++ +M + + +N I C+ +D AL+LF M GIRPN VT++ L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ LC G DA + L +++ + K +++T L+D++ K G +A L++DM +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMI---EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
++I DI YN L+NGFC++ + A F M+ + PDV+TYNTL+ CK ++++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
+ + +S G+ D ++Y T+IQGL GD A++ M+ V P+ +++++D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLR 469
G G L A + D M + +++ + +I C G + L+ +
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI-----EGMCKAGKVDDGWDLFCSLSL 533
Query: 470 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 529
+G+ P+++TY +I G C++ ++EA + K++ G + + L + + +++ DK
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH--LRDGDK 591
Query: 530 A 530
A
Sbjct: 592 A 592
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 219/459 (47%), Gaps = 20/459 (4%)
Query: 80 EGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
+GNP+ +++DL M G + DYR ++R+ K+ A+
Sbjct: 24 KGNPRIAPSSIDLC---------GMCYWGRAFSSGSGDYRE---ILRNGLHDMKLDDAIG 71
Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
L M++ +P ++ N L++ + K+ + + +M + TYN I +C
Sbjct: 72 LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131
Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
R +++ AL L M G P+ VT + L++ C + DAV + +++ +
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV---EMGYRP 188
Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
D IT T L+ F + +A+AL + M Q+ Q ++V Y V++NG C GD A
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
+M DV+ +NT+++ LCK +D+A + + + G+ P+ ++Y ++I LC +
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
G A + L M+EK + P +N +ID + + G A + D M+ + ++FT+
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 440 NALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 499
N+L+ C + A Q+++ M+ + PD++TY LIKG C +++ E+F
Sbjct: 369 NSLV-----NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 500 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 538
++ GL D + + L + + D A+ + ++ +
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 132/270 (48%), Gaps = 3/270 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A+I GK A L MI++ PD+ T+N LVN C L+KA + M
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ TYN I G+C+ ++ LF M++ G+ + VT+ L+ L G +A
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 454
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
K ++++D D++T +IL+D NG +AL +++ M + I+ DI Y +
Sbjct: 455 QKVFKQMVSDG---VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I G C G + + FC + +G P+V+TYNT+++ LC + L EA + + G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSM 392
P+ +Y T+I+ GD + E + M
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 3/174 (1%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
L D + +I+ L G A + ++M+ G PD++T++ L++ LC G LEKA
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
V M + + Y I G C+ ++D LF +++ G++PN VT+N ++ L
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
C K LL +A L ++ +DG + +T L+ ++ ++GDK + L +M
Sbjct: 551 CSKRLLQEAYALLKKM--KEDGPLPNSGTYNT-LIRAHLRDGDKAASAELIREM 601
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 215 bits (547), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 205/384 (53%), Gaps = 11/384 (2%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I L L K A+ L +M+Q+G PD++T+ +VN LCK GD++ A +++ +M
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
R N +N I C+ ++ A+ LF+ M GIRPN VT+N L++ LC G DA
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ L +L + K +V+T L+D++FK G +A L +M Q++I D + YN+L
Sbjct: 313 SRLLSNML---EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLL 369
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
INGFC++ + A F M+ + LP++ TYNTL+N CK ++++ + +S+ G+
Sbjct: 370 INGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
+ ++Y TIIQG GD A+ M+ V + +++++ G G L A
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALV 489
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 482
I + + N+F +N +I C G + A L+ + I PD++TY +
Sbjct: 490 IFKYLQKSEMELNIFIYNTMI-----EGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTM 541
Query: 483 IKGHCARGNMKEAEEVFAKIQTLG 506
I G C++ ++EA+++F K++ G
Sbjct: 542 ISGLCSKRLLQEADDLFRKMKEDG 565
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 192/387 (49%), Gaps = 8/387 (2%)
Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
D + I C ++ AL + KM++ G PD++T + L+N C + A ++
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
+M EM P+ T+ I G N+ +A+ L M G +P+ VT+ +V+ LCK+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
G + A+ L ++ A + ++V+ ++DS K A+ L+ +M K I+ ++
Sbjct: 237 GDIDLALNLLNKMEA---ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
V YN LIN C G S A ML++ P+V+T+N L++ K+GKL EA +
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
+ + + PD I+Y +I G C+H + +A++ M+ K +P +N +I+G+ +C
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDI 476
+ + + M G+ N T+ +I + C+ + ++ +M+ + DI
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM-----VFKQMVSNRVPTDI 468
Query: 477 ITYTELIKGHCARGNMKEAEEVFAKIQ 503
+TY+ L+ G C+ G + A +F +Q
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQ 495
Score = 165 bits (418), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 186/385 (48%), Gaps = 8/385 (2%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K + L +M G D+ T++ +N C+ L A V+ +M ++ P+ T +
Sbjct: 98 KFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
+ + GYC + A+ L M G +P+ T L+H L +AV + +++
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
D++T +++ K GD AL L N M I+ ++V +N +I+ C +
Sbjct: 218 G---CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A F +M +G P+V+TYN+L+NCLC G+ +AS + + + P+ +++ +
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I G +V+A + M+++S+ P+ +N++I+G+ L A + M+S
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 433 SSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 492
N+ T+N LI C + ++L+ EM +RG+ + +TYT +I+G G+
Sbjct: 395 LPNIQTYNTLI-----NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 493 KEAEEVFAKIQTLGLAIDHIPFRIL 517
A+ VF ++ + + D + + IL
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSIL 474
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 196/406 (48%), Gaps = 8/406 (1%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K+ A+ L M++ P ++ N L++ + K+ E + +M + S + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
FI +CR ++L AL + + M G P+ VT + L++ C + DAV + +++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV-- 180
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
+ D T T L+ F + +A+AL + M Q+ Q D+V Y ++NG C GDI
Sbjct: 181 -EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A +M +V+ +NT+++ LCK ++ A + + G+ P+ ++Y ++
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I LC +G A L +MLEK + P +N +ID + + G L A + + M+ +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 433 SSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 492
+ T+N LI C + A Q++ M+ + P+I TY LI G C +
Sbjct: 360 DPDTITYNLLI-----NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 493 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 538
++ E+F ++ GL + + + + + + + + D A+ + ++ +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 152/305 (49%), Gaps = 7/305 (2%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
++I LC G+ A L M++K P+V+T N L++ K G L +A+ + EM +
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ TYN I G+C N LD+A +F M + PN T+N L++ CK + D
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
V+ E+ + +T T ++ +F+ GD A ++ M + TDI+ Y++L
Sbjct: 418 VELFREM---SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
++G C G + +A F + K ++ YNT++ +CK GK+ EA + LS +
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---I 531
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR-CGDLSNAF 421
PD ++Y T+I GLC + +A + M E +P +N +I R C ++A
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591
Query: 422 SIRDL 426
I+++
Sbjct: 592 LIKEM 596
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 135/267 (50%), Gaps = 6/267 (2%)
Query: 276 DKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
+KF+ ++L M I D+ Y++ IN FC +S A A +M+K G+ PD++T
Sbjct: 97 NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 156
Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
++LLN C ++ +A + + G PD ++ T+I GL +H +A + M++
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNL 454
+ P+ + +++G + GD+ A ++ + M + + +NV FN +I + C
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII-----DSLCKY 271
Query: 455 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 514
H+ +A+ L+ EM +GI P+++TY LI C G +A + + + + + + F
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331
Query: 515 RILKKRYRRMKESDKARDIHQKWLLRN 541
L + + + +A +H++ + R+
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRS 358
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 146/336 (43%), Gaps = 49/336 (14%)
Query: 82 NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
NP V FNAL D KE L + + + R +++ D + +I C+ ++ A
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
+ + M+ K +P++ T+N L+N CK +E + REMS+ N TY I G+
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
+ + D A +F M +N + + +T++IL+H LC G L
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD------------------ 485
Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
AL ++ + + ++ +I YN +I G C G + A+
Sbjct: 486 --------------------TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
FC + PDV+TYNT+++ LC + L EA + + + G P+ +Y T+I+
Sbjct: 526 FCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582
Query: 379 HGDIVKAREFLLSMLEKSVVPEPH----IWNVIIDG 410
D + E + M V + + N++ DG
Sbjct: 583 DCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDG 618
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 219/421 (52%), Gaps = 14/421 (3%)
Query: 114 LETDYR----RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
+E YR +I L L K A+ L +M+Q+G P+++T+ +VN LCK GD+
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
+ A +++ +M + + +N I C+ +D AL+LF M GIRPN VT++ L
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ LC G DA + L +++ + K +++T L+D++ K G +A L +DM +
Sbjct: 227 ISCLCSYGRWSDASQLLSDMI---EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
++I DI YN LINGFC++ + A F M+ + PD+ TYNTL+ CK ++++
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
+ + +S G+ D ++Y T+IQGL GD A++ M+ V P+ +++++D
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLR 469
G G L A + D M + +++ + +I C G + L+ +
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI-----EGMCKAGKVDDGWDLFCSLSL 458
Query: 470 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 529
+G+ P+++TY +I G C++ ++EA + K++ G D + L + + +++ DK
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH--LRDGDK 516
Query: 530 A 530
A
Sbjct: 517 A 517
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 196/395 (49%), Gaps = 8/395 (2%)
Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
M++ +P + N L++ + K+ + + +M + S N TYN I +CR ++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
+ AL L M G P+ VT + L++ C + DAV + +++ + D IT
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV---EMGYRPDTIT 117
Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
T L+ F + +A+AL + M Q+ Q ++V Y V++NG C GDI AF +M
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
DV+ +NT+++ LCK +D+A + + + G+ P+ ++Y ++I LC +G
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
A + L M+EK + P +N +ID + + G A + D M+ + ++FT+N+LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 444 LAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 503
C + A Q+++ M+ + PD+ TY LIKG C +++ E+F ++
Sbjct: 298 -----NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 504 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 538
GL D + + L + + D A+ + ++ +
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Score = 178 bits (452), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 194/387 (50%), Gaps = 8/387 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I C +I AL L KM++ G P ++T + L+N C + A ++ +M EM
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ T+ I G N+ +A+ L M G +PN VT+ ++V+ LCK+G + A
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
L ++ A K +DV+ ++DS K AL L+ +M K I+ ++V Y+ LI
Sbjct: 171 NLLNKMEA---AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+ C G S A M+++ P+++T+N L++ K+GK EA + + K +
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD +Y ++I G C+H + KA++ M+ K P+ +N +I G+ + + + +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 483
M G+ + T+ LI C+ A +++ +M+ G+ PDI+TY+ L+
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCD-----NAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 484 KGHCARGNMKEAEEVFAKIQTLGLAID 510
G C G +++A EVF +Q + +D
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLD 429
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 152/307 (49%), Gaps = 4/307 (1%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ ++I LC G+ A L MI+K P+++T N L++ K G +A+ + +M
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ P+ TYN+ I G+C + LDKA +F M + P+ T+N L+ CK +
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
D + E+ D +T T L+ F +GD A ++ M + DI+ Y+
Sbjct: 343 DGTELFREM---SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 399
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
+L++G C NG + A F M K D+ Y T++ +CK GK+D+ + LS
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD-LSN 419
GV P+ ++Y T+I GLC + +A L M E +P+ +N +I + R GD ++
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 519
Query: 420 AFSIRDL 426
A IR++
Sbjct: 520 AELIREM 526
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 134/262 (51%), Gaps = 5/262 (1%)
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
++L M + I ++ YN+LIN FC IS A A +M+K G+ P ++T ++LLN
Sbjct: 29 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 88
Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
C ++ +A + + G PD I++ T+I GL +H +A + M+++ P
Sbjct: 89 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 148
Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHL 459
+ V+++G + GD+ AF++ + M + + ++V FN +I + C H+
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII-----DSLCKYRHVDD 203
Query: 460 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 519
AL L+ EM +GI P+++TY+ LI C+ G +A ++ + + + + + F L
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263
Query: 520 RYRRMKESDKARDIHQKWLLRN 541
+ + + +A +H + R+
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRS 285
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 138/315 (43%), Gaps = 44/315 (13%)
Query: 82 NPQAV-FNAL-DLILKEN--LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTA 137
NP V FNAL D +KE ++ K D ++ +++ D + ++I C+ ++ A
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDM--IKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
+ M+ K PD+ T+N L+ CK +E + REMS + TY I G
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
+ D A +F M ++G+ P+ +T++IL+ LC
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC----------------------- 406
Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
NG +AL +++ M + I+ DI Y +I G C G + +
Sbjct: 407 ---------------NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
FC + +G P+V+TYNT+++ LC + L EA + + G PD +Y T+I+
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 378 IHGDIVKAREFLLSM 392
GD + E + M
Sbjct: 512 RDGDKAASAELIREM 526
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 39/237 (16%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
L D + +I+ L G A + ++M+ G PD++T++ L++ LC G LEKA
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
V M + + Y I G C+ ++D LF +++ G++PN VT+N ++ L
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
C K LL +A AL M +
Sbjct: 476 CSKRLLQ--------------------------------------EAYALLKKMKEDGPL 497
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
D YN LI +GD +++ +M F+ D T + N L G+LD++
Sbjct: 498 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 553
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 212/398 (53%), Gaps = 10/398 (2%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K A+ L +M+ KG PD++T+ ++N LCK G+ + A +++ +M + + + Y+
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
I C+ +D AL+LF+ M N GIRP+ T++ L+ LC G DA + L ++L
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML-- 302
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
+ K +V+T L+D++ K G +A L+++M Q++I +IV YN LINGFC++ +
Sbjct: 303 -ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A F M+ + LPDV+TYNTL+N CK K+ + + +S+ G+ + ++Y T+
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I G D A+ M+ V P +N ++DG + G L A + + + +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 433 SSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 492
+++T+N I++E C G + L+ + +G+ PD+I Y +I G C +G
Sbjct: 482 EPDIYTYN--IMSE---GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 493 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 530
+EA +F K++ G D + L + + R + DKA
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR--DGDKA 572
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 204/396 (51%), Gaps = 8/396 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I LC ++ AL + KM++ G P ++T N L+N C + +A ++ +M EM
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ T+ + G + N+ +A+ L M G +P+ VT+ +++ LCK+G A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
L ++ + GK +DV+ + ++DS K AL L+ +M K I+ D+ Y+ LI
Sbjct: 226 NLLNKM---EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+ C G S A ML+R P+V+T+N+L++ K+GKL EA + + + +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
P+ ++Y ++I G C+H + +A++ M+ K +P+ +N +I+G+ + + + +
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 483
M G+ N T+ LI + + C+ + ++ +M+ G+ P+I+TY L+
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM-----VFKQMVSDGVHPNIMTYNTLL 457
Query: 484 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 519
G C G +++A VF +Q + D + I+ +
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 200/421 (47%), Gaps = 10/421 (2%)
Query: 118 YRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR 177
YR ++ R+ L K+ A+ L +M++ P ++ + L++ + K+ +
Sbjct: 32 YREKLS--RNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGE 89
Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
+M + S N TYN I CR ++L AL + M G P+ VT N L++ C
Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
+ +AV + +++ + D +T T L+ F++ +A+AL M K Q D+V
Sbjct: 150 RISEAVALVDQMV---EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
Y +ING C G+ A +M K DV+ Y+T+++ LCK +D+A + + +
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
G+ PD +Y ++I LC +G A L MLE+ + P +N +ID + + G L
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDII 477
A + D M+ + N+ T+N+LI C + A Q++ M+ + PD++
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLI-----NGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 478 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 537
TY LI G C + + E+F + GL + + + L + + + D A+ + ++
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 538 L 538
+
Sbjct: 442 V 442
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 169/335 (50%), Gaps = 3/335 (0%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E D + VI LC + AL L +M KG PDV T++ L++ LC G A
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ +M E + +PN T+N+ I + + +L +A LF M I PN VT+N L++
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
C L +A + +++ D DV+T L++ + K + L+ DM ++ +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKD---CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
+ V Y LI+GF D +A F QM+ G P+++TYNTLL+ LCK GKL++A
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ L K+ + PD +Y + +G+C G + + S+ K V P+ +N +I G+ +
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
G A+++ M G + T+N LI A R
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 152/304 (50%), Gaps = 5/304 (1%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+ D + ++I LC G+ A L M+++ P+V+T N L++ K G L +A+
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+ EM + PN TYN+ I G+C + LD+A +F+ M + P+ VT+N L++
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 234 CKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
CK + D + E+ D + + +T T L+ +F+ D A ++ M +
Sbjct: 391 CKAKKVVDGM----ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
+I+ YN L++G C NG + A F + K PD+ TYN + +CK GK+++
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
+ LS GV PD I+Y T+I G C G +A + M E +P+ +N +I +
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566
Query: 413 RCGD 416
R GD
Sbjct: 567 RDGD 570
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 136/312 (43%), Gaps = 39/312 (12%)
Query: 82 NPQAV-FNAL-DLILKEN-LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
NP V FN+L D KE L + + D R +++ + + ++I C+ ++ A
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
+ M+ K +PDV+T+N L+N CK + + R+MS N TY I G+
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV---KFLGEVLADDD- 254
+ ++ D A +F M ++G+ PN +T+N L+ LCK G L A+ ++L + + D
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 255 -------------GKAT---------------SDVITSTILMDSYFKNGDKFQALALWND 286
GK DVI ++ + K G K +A L+
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
M + D YN LI +GD +++ +M F D TY + + L G+
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGR 604
Query: 347 LDEASHFYGVLS 358
LD+ F VLS
Sbjct: 605 LDKG--FLEVLS 614
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 207/397 (52%), Gaps = 12/397 (3%)
Query: 114 LETDYR----RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
+E YR +I L L K A+ L +M+Q+G P+++T+ +VN LCK GD+
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
+ A +++ +M + N Y+ I C+ D AL+LF+ M N G+RPN +T++ L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ LC DA + L +++ + K +V+T L+D++ K G +A L+++M +
Sbjct: 302 ISCLCNYERWSDASRLLSDMI---ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
++I DI Y+ LINGFC++ + A F M+ + P+V+TYNTL+N CK ++DE
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
+ +S+ G+ + ++Y T+I G D A+ M+ V P +N ++D
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLR 469
G + G L A + + + + ++T+N +I C G + L+ +
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI-----EGMCKAGKVEDGWDLFCSLSL 533
Query: 470 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 506
+G+ PD+I Y +I G C +G +EA+ +F K++ G
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 223/467 (47%), Gaps = 20/467 (4%)
Query: 72 FSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLG 131
F +++ +GNP+ +++DL M G + DYR ++R+
Sbjct: 16 FVHRNLQGKGNPRIAPSSIDLC---------GMCYWGRAFSSGSGDYRE---ILRNGLHS 63
Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
K+ A+ L M++ +P + N L++ + K+ + + +M + S N TY
Sbjct: 64 MKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTY 123
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
N I +CR +++ AL L M G P+ VT + L++ C + DAV + +++
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV- 182
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
+ D IT T L+ F + +A+AL + M Q+ Q ++V Y V++NG C GD
Sbjct: 183 --EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
I AF +M +V+ Y+T+++ LCK D+A + + + GV P+ I+Y +
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
+I LC + A L M+E+ + P +N +ID + + G L A + D M+
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 432 VSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 491
+ ++FT+++LI C + A +++ M+ + P+++TY LI G C
Sbjct: 361 IDPDIFTYSSLI-----NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 492 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 538
+ E E+F ++ GL + + + L + + ++ D A+ + ++ +
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 138/280 (49%), Gaps = 3/280 (1%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ ++I LC + A L MI++ P+V+T N L++ K G L +A+ + EM
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ P+ TY++ I G+C + LD+A H+F M + PN VT+N L++ CK +
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+ V+ E+ + +T T L+ +F+ D A ++ M + +I+ YN
Sbjct: 418 EGVELFREM---SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
L++G C NG + A F + + P + TYN ++ +CK GK+++ + LS
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
GV PD I Y T+I G C G +A M E +P+
Sbjct: 535 GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 42/288 (14%)
Query: 82 NPQAV-FNAL-DLILKEN-LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
NP V FNAL D +KE L + + D ++ +++ D + ++I C+ ++ A
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
+ MI K P+V+T+N L+N CK +++ + REMS+ N TY I G+
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
+ + D A +F M ++G+ PN +T+N L+ LC
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC------------------------ 481
Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
KNG +A+ ++ + + ++ I YN++I G C G + +
Sbjct: 482 --------------KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
FC + +G PDVI YNT+++ C++G +EA + + + G PD
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 131/262 (50%), Gaps = 5/262 (1%)
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
++L M + I ++ YN+LIN FC IS A A +M+K G+ P ++T ++LLN
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
C ++ +A + + G PD I++ T+I GL +H +A + M+++ P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHL 459
+ V+++G + GD+ AF++ + M + + +NV ++ +I + C H
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI-----DSLCKYRHEDD 278
Query: 460 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 519
AL L+ EM +G+ P++ITY+ LI C +A + + + + + + F L
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 520 RYRRMKESDKARDIHQKWLLRN 541
+ + + +A ++ + + R+
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRS 360
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
LC GK+ A+ + + + P + T+N ++ +CK G +E + +S P+
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
YN I+G+CR ++A LF M +G P+ T
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
R +E + +I +C GK+ L + KG PDV+ +N +++ C+ G E
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Query: 171 KADHVIREMSEMRPSPNCAT 190
+AD + R+M E P P+ T
Sbjct: 558 EADALFRKMREDGPLPDSGT 577
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 212 bits (539), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 195/382 (51%), Gaps = 8/382 (2%)
Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
C K+ A K+I+ G PD +T + L+N LC G + +A ++ M EM P
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
T NA + G C ++ A+ L M G +PN VT+ ++ +CK G A++ L +
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
+ ++ K D + +I++D K+G A L+N+M K + DI+ Y LI GFC
Sbjct: 238 M---EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
G M+KR PDV+ ++ L++C K+GKL EA + + + G++PD ++
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
Y ++I G C + KA L M+ K P +N++I+GY + + + + M
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 429 SFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 488
GV ++ T+N LI C LG + +A +L+ EM+ R + PDI++Y L+ G C
Sbjct: 415 LRGVVADTVTYNTLI-----QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 489 RGNMKEAEEVFAKIQTLGLAID 510
G ++A E+F KI+ + +D
Sbjct: 470 NGEPEKALEIFEKIEKSKMELD 491
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 197/395 (49%), Gaps = 8/395 (2%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A++ LCL GK+ A+ L +M++ G P+ +T+ ++ +CK G A ++R+M E
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ + Y+ I G C+ LD A +LF+ M G + + + + L+ C G D
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
K L +++ K T DV+ + L+D + K G +A L +M Q+ I D V Y L
Sbjct: 302 AKLLRDMIKR---KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I+GFC + A M+ +G P++ T+N L+N CK +D+ + +S GV
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
D ++Y T+IQG C G + A+E M+ + V P+ + +++DG G+ A
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 482
I + + + ++ +N +I CN + A L+ + +G+ PD+ TY +
Sbjct: 479 IFEKIEKSKMELDIGIYNIII-----HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 483 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 517
I G C +G++ EA+ +F K++ G + + + IL
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 160/323 (49%), Gaps = 3/323 (0%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ +IR C G+ L R MI++ PDV+ + L++ K G L +A+ + +EM
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ SP+ TY + I G+C+ N+LDKA H+ M + G PN T NIL++ CK L+
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
D ++ ++ +D +T L+ + + G A L+ +M + ++ DIV+Y
Sbjct: 405 DGLELFRKMSLRG---VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
+L++G C NG+ A F ++ K D+ YN +++ +C K+D+A + L
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
GV PD +Y +I GLC G + +A M E P +N++I + GD + +
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 421 FSIRDLMLSFGVSSNVFTFNALI 443
+ + + G S + T ++
Sbjct: 582 AKLIEEIKRCGFSVDASTVKMVV 604
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 172/378 (45%), Gaps = 10/378 (2%)
Query: 166 IGDLEKADHV--IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
I D+++ D V +EM+ RP P ++ + R + D L L M GI N
Sbjct: 48 IVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNL 107
Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
T +I+++ C+ L A +G+++ D +T + L++ G +AL L
Sbjct: 108 YTLSIMINCCCRCRKLSLAFSAMGKIIKLG---YEPDTVTFSTLINGLCLEGRVSEALEL 164
Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
+ M + + ++ N L+NG CLNG +S A +M++ GF P+ +TY +L +CK
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
G+ A + + + D + Y II GLC G + A M K + I
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQL 463
+ +I G+ G + + M+ ++ +V F+ALI + G + A +L
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE-----GKLREAEEL 339
Query: 464 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 523
+ EM++RGI+PD +TYT LI G C + +A + + + G + F IL Y +
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Query: 524 MKESDKARDIHQKWLLRN 541
D ++ +K LR
Sbjct: 400 ANLIDDGLELFRKMSLRG 417
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 143/313 (45%), Gaps = 40/313 (12%)
Query: 99 DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
D K +RD ++ + D A+I GK+ A L ++MIQ+G PD +T+
Sbjct: 300 DGAKLLRDM--IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
L++ CK L+KA+H++ M PN T+N I GYC+ N +D L LF M+ G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
+ + VT+N L+ C+ G L A + E+++ + D+++ IL+D NG+
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR---RVRPDIVSYKILLDGLCDNGEPE 474
Query: 279 QALALWN-------------------------------DMF----QKNIQTDIVAYNVLI 303
+AL ++ D+F K ++ D+ YN++I
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
G C G +S A F +M + G P+ TYN L+ +G +++ + + G +
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594
Query: 364 PDQISYKTIIQGL 376
D + K ++ L
Sbjct: 595 VDASTVKMVVDML 607
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 202/397 (50%), Gaps = 8/397 (2%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
R ++ D + ++R LC GK+ A+ + +M+Q+ PDV+T+ L+ C+ +
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
A ++ EM + +P+ TYN + G C+ LD+A+ + M ++G +PN +THNI++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
++C G DA K L ++L + V+T IL++ + G +A+ + M Q
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKG---FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
Q + ++YN L++GFC + A Y +M+ RG PD++TYNT+L LCK GK+++A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
LS G +P I+Y T+I GL G KA + L M K + P+ ++ ++ G
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRR 470
R G + A G+ N TFN+++L C A+ M+ R
Sbjct: 494 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML-----GLCKSRQTDRAIDFLVFMINR 548
Query: 471 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 507
G P+ +YT LI+G G KEA E+ ++ GL
Sbjct: 549 GCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 204/411 (49%), Gaps = 11/411 (2%)
Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
+IR C GK A + + G VPDV+T+N +++ CK G++ A V+ MS
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS- 199
Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
SP+ TYN + C +L +A+ + M P+ +T+ IL+ A C+ +G
Sbjct: 200 --VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
A+K L E+ D T DV+T +L++ K G +A+ NDM Q +++ +N+
Sbjct: 258 AMKLLDEM---RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
++ C G A ML++GF P V+T+N L+N LC++G L A + + G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
P+ +SY ++ G C + +A E+L M+ + P+ +N ++ + G + +A
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 481
I + + S G S + T+N +I + G A++L DEM + + PD ITY+
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKA-----GKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 482 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 532
L+ G G + EA + F + + +G+ + + F + + +++D+A D
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 177/355 (49%), Gaps = 12/355 (3%)
Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
DV ++N+L ++ + G+LE+ + M P+ I G+CR+ + KA +
Sbjct: 102 DVESNNHL-RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
+ +G P+ +T+N+++ CK G + +A+ L D + DV+T ++ S
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVL------DRMSVSPDVVTYNTILRSL 214
Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
+G QA+ + + M Q++ D++ Y +LI C + + A +M RG PDV
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
+TYN L+N +CK+G+LDEA F + +G P+ I++ I++ +C G + A + L
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGAS 451
ML K P +N++I+ R G L A I + M G N ++N L+
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL-----HGF 389
Query: 452 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 506
C + A++ + M+ RG PDI+TY ++ C G +++A E+ ++ + G
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 150/287 (52%), Gaps = 5/287 (1%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
H ++R +C G+ A L M++KG P V+T N L+N LC+ G L +A ++ +M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ PN +YN + G+C+ ++D+A+ M + G P+ VT+N ++ ALCK G +
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 241 DAVKFLGEVLADDDGKATSDV-ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
DAV+ L ++ K S V IT ++D K G +A+ L ++M K+++ D + Y
Sbjct: 432 DAVEILNQL----SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
+ L+ G G + A +F + + G P+ +T+N+++ LCK + D A F +
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
G P++ SY +I+GL G +A E L + K ++ + V
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 153/317 (48%), Gaps = 11/317 (3%)
Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
V N + + + G L + KFL ++ + D+I T L+ + + G +A +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGN---VPDIIPCTTLIRGFCRLGKTRKAAKI 159
Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
+ D++ YNV+I+G+C G+I++A + +M PDV+TYNT+L LC
Sbjct: 160 LEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCD 216
Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
GKL +A + + PD I+Y +I+ C + A + L M ++ P+
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQL 463
+NV+++G + G L A + M S G NV T N ++ + C+ G A +L
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS-----MCSTGRWMDAEKL 331
Query: 464 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 523
+MLR+G +P ++T+ LI C +G + A ++ K+ G + + + L + +
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 524 MKESDKARDIHQKWLLR 540
K+ D+A + ++ + R
Sbjct: 392 EKKMDRAIEYLERMVSR 408
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
NG SS + F L DV + N L + + G+L+E F + G PD I
Sbjct: 88 NGHYSSVNSSFA-------LEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIP 139
Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
T+I+G C G KA + L + VP+ +NV+I GY + G+++NA S+ D M
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM- 198
Query: 429 SFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 488
VS +V T+N ++ + C+ G + A+++ D ML+R PD+ITYT LI+ C
Sbjct: 199 --SVSPDVVTYNTILR-----SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 489 RGNMKEAEEVFAKIQTLGLAIDHIPFRIL 517
+ A ++ +++ G D + + +L
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 195/384 (50%), Gaps = 8/384 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
V+ +CL + A KM++ G PD++T L+N C +E A + ++ M
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
PN TY I C+ L+ A+ LF+ M NG RPN VT+N LV LC+ G GDA
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
L +++ + +VIT T L+D++ K G +A L+N M Q ++ D+ Y LI
Sbjct: 244 WLLRDMMKR---RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
NG C+ G + A F M + G P+ + Y TL++ CK ++++ + +S+ GV
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
+ I+Y +IQG C+ G A+E M + P+ +NV++DG G + A I
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 483
+ M + N+ T+ +I C LG + A L+ + +G+ P++ITYT +I
Sbjct: 421 FEYMRKREMDINIVTYTIII-----QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Query: 484 KGHCARGNMKEAEEVFAKIQTLGL 507
G C RG + EA+ +F K++ G
Sbjct: 476 SGFCRRGLIHEADSLFKKMKEDGF 499
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 140/282 (49%), Gaps = 3/282 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A++ LC G+ G A WL R M+++ P+V+T L++ K+G L +A + M +M
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ TY + I G C LD+A +F M NG PN V + L+H CK + D
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+K E+ ++ IT T+L+ Y G A ++N M + DI YNVL
Sbjct: 348 MKIFYEM---SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
++G C NG + A F M KR +++TY ++ +CK GK+++A + L G+
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
P+ I+Y T+I G C G I +A M E +P ++
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 162/315 (51%), Gaps = 3/315 (0%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ +IR LC + A+ L +M G+ P+V+T+N LV LC+IG A ++R+M
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM 250
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ R PN T+ A I + +V +L +A L++ M + P+ T+ L++ LC GLL
Sbjct: 251 KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+A + L + +G ++VI +T L+ + K+ + ++ +M QK + + + Y
Sbjct: 311 EARQMF--YLMERNGCYPNEVIYTT-LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
VLI G+CL G A F QM R PD+ TYN LL+ LC GK+++A + + K
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
+ + ++Y IIQG+C G + A + S+ K + P + +I G+ R G + A
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Query: 421 FSIRDLMLSFGVSSN 435
S+ M G N
Sbjct: 488 DSLFKKMKEDGFLPN 502
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 174/407 (42%), Gaps = 63/407 (15%)
Query: 135 GTALWLR-----RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
G W+R RK+++ G HN N+ A + M RP P+
Sbjct: 40 GFCFWIRAFSSYRKILRNGL------HNLQFND---------ALDLFTRMVHSRPLPSII 84
Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
+ ++ ++N D + LF M GI P T NI++H +C A FLG+
Sbjct: 85 DFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGK- 143
Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
M + + D+V + L+NG+C
Sbjct: 144 -------------------------------------MMKLGFEPDLVTFTSLLNGYCHW 166
Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
I A A F Q+L GF P+V+TY TL+ CLCK L+ A + + G P+ ++Y
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
++ GLC G A L M+++ + P + +ID + + G L A + ++M+
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 430 FGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 489
V +VFT+ +LI C G + A Q++ M R G P+ + YT LI G C
Sbjct: 287 MSVYPDVFTYGSLI-----NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 490 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
+++ ++F ++ G+ + I + +L + Y + D A+++ +
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 208/409 (50%), Gaps = 8/409 (1%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
E D +I+ L L GK+ A+ L +M++ G PDV+T+N +VN +C+ GD A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
++R+M E + TY+ I CR +D A+ LF M GI+ + VT+N LV LC
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
K G D L ++++ + +VIT +L+D + K G +A L+ +M + I
Sbjct: 275 KAGKWNDGALLLKDMVSRE---IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
+I+ YN L++G+C+ +S A M++ PD++T+ +L+ C ++D+ +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
+SK G+ + ++Y ++QG C G I A E M+ V+P+ + +++DG
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITP 474
G L A I + + + + + +I +G G + A L+ + +G+ P
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG-----GKVEDAWNLFCSLPCKGVKP 506
Query: 475 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 523
+++TYT +I G C +G++ EA + K++ G A + + L + + R
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 184/356 (51%), Gaps = 8/356 (2%)
Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
G ++ T N ++N C+ A V+ ++ ++ P+ T+N I G ++ +A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
+ L M NG +P+ VT+N +V+ +C+ G A+ L ++ ++ +DV T + +
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM---EERNVKADVFTYSTI 234
Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
+DS ++G A++L+ +M K I++ +V YN L+ G C G + M+ R
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
+P+VIT+N LL+ K+GKL EA+ Y + G++P+ I+Y T++ G C+ + +A
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
L M+ P+ + +I GY + + + + G+ +N T++ L+
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV---- 410
Query: 448 RGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 503
C G I LA +L+ EM+ G+ PD++TY L+ G C G +++A E+F +Q
Sbjct: 411 -QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 182/375 (48%), Gaps = 10/375 (2%)
Query: 166 IGDLEKADHV--IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
I D++K D + +EM RP P+ ++ F + R + + L + NGI N
Sbjct: 64 IVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123
Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
T NI+++ C+ A LG+V+ D T L+ F G +A+ L
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLG---YEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
+ M + Q D+V YN ++NG C +GD S A +M +R DV TY+T+++ LC+
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
G +D A + + G+ ++Y ++++GLC G L M+ + +VP
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQL 463
+NV++D + + G L A + M++ G+S N+ T+N L+ C + A +
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM-----DGYCMQNRLSEANNM 355
Query: 464 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 523
D M+R +PDI+T+T LIKG+C + + +VF I GL + + + IL + + +
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 524 MKESDKARDIHQKWL 538
+ A ++ Q+ +
Sbjct: 416 SGKIKLAEELFQEMV 430
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 184/378 (48%), Gaps = 13/378 (3%)
Query: 98 LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
LD L+ M + ++ D + +I LC G I A+ L ++M KG V+T+N
Sbjct: 213 LDLLRKMEER-----NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
LV LCK G ++++M PN T+N + + + +L +A L+ M
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
GI PN +T+N L+ C + L +A L ++ + K + D++T T L+ Y
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN---KCSPDIVTFTSLIKGYCMVKRV 384
Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
+ ++ ++ ++ + + V Y++L+ GFC +G I A F +M+ G LPDV+TY L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
L+ LC GKL++A + L K+ + + Y TII+G+C G + A S+ K V
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHI 457
P + V+I G + G LS A + M G + N T+N LI A R G +
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD-----GDL 559
Query: 458 HLALQLYDEMLRRGITPD 475
+ +L +EM G + D
Sbjct: 560 TASAKLIEEMKSCGFSAD 577
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+++R LC GK L + M+ + VP+V+T N L++ K G L++A+ + +EM
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
SPN TYN + GYC N L +A ++ M N P+ VT L+ C + D
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+K + ++ +T +IL+ + ++G A L+ +M + D++ Y +L
Sbjct: 388 MKVFRNI---SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
++G C NG + A F + K ++ Y T++ +CK GK+++A + + L GV
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
P+ ++Y +I GLC G + +A L M E P +N +I + R GDL+ +
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 423 IRDLMLSFGVSSNVFTFNALI 443
+ + M S G S++ + +I
Sbjct: 565 LIEEMKSCGFSADASSIKMVI 585
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 139/295 (47%), Gaps = 39/295 (13%)
Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
GK+ A L ++MI +G P+++T+N L++ C L +A++++ M + SP+ T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
+ I GYC V +D + +F ++ G+ N VT++ILV C+ G + A + E+++
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ---------------------- 289
DV+T IL+D NG +AL ++ D+ +
Sbjct: 432 HG---VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 290 -------------KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
K ++ +++ Y V+I+G C G +S A +M + G P+ TYNT
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
L+ + G L ++ + G + D S K +I L + G++ K+ +LS
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML-LSGELDKSFLDMLS 602
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 124/264 (46%), Gaps = 5/264 (1%)
Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
K A+AL+ +M + +V ++ + + + Q+ G ++ T N
Sbjct: 69 KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
++NC C+ K A G + K G PD ++ T+I+GL + G + +A + M+E
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGH 456
P+ +N I++G R GD S A + M V ++VFT++ +I + C G
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII-----DSLCRDGC 243
Query: 457 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 516
I A+ L+ EM +GI ++TY L++G C G + + + + + + I F +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 517 LKKRYRRMKESDKARDIHQKWLLR 540
L + + + +A +++++ + R
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITR 327
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ +I +C GGK+ A L + KG P+V+T+ +++ LCK G L +A+ ++R+M
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
E +PN TYN I + R +L + L M + G + + +++ L
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Query: 431 GVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 490
G++ N++T N +I C A + ++++ G PD T+ LIKG G
Sbjct: 118 GIAHNIYTLNIMI-----NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 491 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 541
+ EA + ++ G D + + + R ++ A D+ +K RN
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 205 bits (521), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 200/385 (51%), Gaps = 14/385 (3%)
Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
R LCL A K+I+ G P+ +T + L+N LC G + +A ++ M EM
Sbjct: 137 RKLCL------AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
P+ T N + G C + +A+ L M G +PN VT+ +++ +CK G A++
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
L ++ ++ D + +I++D K+G A L+N+M K I T+I+ YN+LI G
Sbjct: 251 LRKM---EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
FC G M+KR P+V+T++ L++ K+GKL EA + + G+APD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
I+Y ++I G C + KA + + M+ K P +N++I+GY + + + +
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 426 LMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 485
M GV ++ T+N LI C LG +++A +L+ EM+ R + P+I+TY L+ G
Sbjct: 428 KMSLRGVVADTVTYNTLI-----QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 486 HCARGNMKEAEEVFAKIQTLGLAID 510
C G ++A E+F KI+ + +D
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELD 507
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 197/395 (49%), Gaps = 8/395 (2%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
++ LCL GK A+ L KM++ G P+ +T+ ++N +CK G A ++R+M E
Sbjct: 198 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ Y+ I G C+ LD A +LF+ M GI N +T+NIL+ C G D
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
K L +++ K +V+T ++L+DS+ K G +A L +M + I D + Y L
Sbjct: 318 AKLLRDMIKR---KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I+GFC + A M+ +G P++ T+N L+N CK ++D+ + +S GV
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
D ++Y T+IQG C G + A+E M+ + V P + +++DG G+ A
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 482
I + + + ++ +N +I CN + A L+ + +G+ P + TY +
Sbjct: 495 IFEKIEKSKMELDIGIYNIII-----HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549
Query: 483 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 517
I G C +G + EAE +F K++ G A D + IL
Sbjct: 550 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 179/397 (45%), Gaps = 43/397 (10%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
++ D ++ +I LC G + A L +M KG +++T+N L+ C G +
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++R+M + + +PN T++ I + + +L +A L M + GI P+ +T+ L+
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
CK+ L A + + + M K
Sbjct: 379 CKENHLDKANQMV--------------------------------------DLMVSKGCD 400
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
+I +N+LING+C I F +M RG + D +TYNTL+ C+ GKL+ A
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ + V P+ ++YK ++ GLC +G+ KA E + + + + I+N+II G
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGIT 473
+ +A+ + + GV V T+N +I G C G + A L+ +M G
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMI-----GGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 474 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 510
PD TY LI+ H G+ ++ ++ +++ G ++D
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 194/408 (47%), Gaps = 8/408 (1%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K A+ L R MI +P V+ + L + + K + + ++M + N T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
I +CR +L A + G PN +T + L++ LC +G + +A++ + ++
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV-- 185
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
+ D+IT L++ +G + +A+ L + M + Q + V Y ++N C +G
Sbjct: 186 -EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
+ A +M +R D + Y+ +++ LCK G LD A + + + G+ + I+Y +
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I G C G + L M+++ + P ++V+ID + + G L A + M+ G+
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 433 SSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 492
+ + T+ +LI C H+ A Q+ D M+ +G P+I T+ LI G+C +
Sbjct: 365 APDTITYTSLI-----DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 493 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 540
+ E+F K+ G+ D + + L + + + + + A+++ Q+ + R
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 153/320 (47%), Gaps = 3/320 (0%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I C G+ L R MI++ P+V+T + L++ K G L +A+ + +EM
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
+P+ TY + I G+C+ N LDKA + M + G PN T NIL++ CK + D +
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ ++ +D +T L+ + + G A L+ +M + + +IV Y +L+
Sbjct: 424 ELFRKMSLRG---VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+G C NG+ A F ++ K D+ YN +++ +C K+D+A + L GV
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
P +Y +I GLC G + +A M E P+ +N++I + GD + + +
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 424 RDLMLSFGVSSNVFTFNALI 443
+ + G S + T +I
Sbjct: 601 IEELKRCGFSVDASTIKMVI 620
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 224/451 (49%), Gaps = 46/451 (10%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQK---GTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+++ LC + AL L M G+ PDV+++ ++N K GD +KA EM
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ P+ TYN+ I C+ +DKA+ + +TM NG+ P+ +T+N ++H C G
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 283
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+A+ FL ++ +D DV+T ++LMD KNG +A +++ M ++ ++ +I Y
Sbjct: 284 EAIGFLKKMRSDG---VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 301 VLINGFCL-----------------------------------NGDISSAFAYFCQMLKR 325
L+ G+ G + A F +M ++
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 400
Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
G P+ +TY ++ LCK G++++A ++ + G++P I Y ++I GLC +A
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460
Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
E +L ML++ + +N IID + + G + + + +LM+ GV NV T+N LI
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI-- 518
Query: 446 ETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 505
C G + A++L M+ G+ P+ +TY+ LI G+C M++A +F ++++
Sbjct: 519 ---NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESS 575
Query: 506 GLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
G++ D I + I+ + + + + A++++ +
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVR 606
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 181/370 (48%), Gaps = 6/370 (1%)
Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
PD+ T+ L+ C+ G L+ + + + + + + G C A+
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 209 HL-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
+ M G PN ++NIL+ LC + +A++ L + D G + DV++ T +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
++ +FK GD +A + +++M + I D+V YN +I C + A M+K G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
+PD +TYN++L+ C G+ EA F + GV PD ++Y ++ LC +G ++AR+
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
SM ++ + PE + ++ GY G L + DLM+ G+ + + F+ LI A
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 448 RGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 507
+ G + A+ ++ +M ++G+ P+ +TY +I C G +++A F ++ GL
Sbjct: 383 KQ-----GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 508 AIDHIPFRIL 517
+ +I + L
Sbjct: 438 SPGNIVYNSL 447
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 176/367 (47%), Gaps = 8/367 (2%)
Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
M++ G PD + L+ K G +++A V +M + +PN TY A I C+
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
++ A+ F M + G+ P + +N L+H LC A + + E+L D G + +
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML--DRGICLNTIFF 479
Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
++I+ DS+ K G ++ L+ M + ++ +++ YN LING+CL G + A M+
Sbjct: 480 NSII-DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
G P+ +TY+TL+N CK ++++A + + +GV+PD I+Y I+QGL
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
A+E + + E E +N+I+ G + +A + + + TFN +I
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658
Query: 444 LAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 503
A +G A L+ G+ P+ TY + + +G ++E +++F ++
Sbjct: 659 -----DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713
Query: 504 TLGLAID 510
G +D
Sbjct: 714 DNGCTVD 720
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 149/333 (44%), Gaps = 38/333 (11%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE- 181
AVI LC G++ A+ +MI +G P + +N L++ LC E+A+ +I EM +
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 182 ----------------------------------MRPSPNCATYNAFITGYCRVNELDKA 207
+ PN TYN I GYC ++D+A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
+ L S M + G++PN VT++ L++ CK + DA+ E+ + + D+IT I+
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM---ESSGVSPDIITYNII 587
Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
+ F+ A L+ + + Q ++ YN++++G C N A F +
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647
Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
+ T+N +++ L K G+ DEA + S G+ P+ +Y+ + + + G + + +
Sbjct: 648 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 707
Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
LSM + + + N I+ + G+++ A
Sbjct: 708 LFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 163/374 (43%), Gaps = 16/374 (4%)
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG---IRPNRVTH 226
E A HV E+ + N + R + A+ ++ MA G + P+ T+
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTY 90
Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL-ALWN 285
IL+ C+ G L LG V+ D I T L+ + A+ +
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKG---FRVDAIAFTPLLKGLCADKRTSDAMDIVLR 147
Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR---GFLPDVITYNTLLNCLC 342
M + ++ +YN+L+ G C A M G PDV++Y T++N
Sbjct: 148 RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 207
Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
K+G D+A Y + G+ PD ++Y +II LC + KA E L +M++ V+P+
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267
Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQ 462
+N I+ GY G A M S GV +V T++ L+ C G A +
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLM-----DYLCKNGRCMEARK 322
Query: 463 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 522
++D M +RG+ P+I TY L++G+ +G + E + + G+ DH F IL Y
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 523 RMKESDKARDIHQK 536
+ + D+A + K
Sbjct: 383 KQGKVDQAMLVFSK 396
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 122/300 (40%), Gaps = 38/300 (12%)
Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
VR ++ + + +I CL GK+ A+ L M+ G P+ +T++ L+N CKI +
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
E A + +EM SP+ TYN + G + A L+ + +G + T+NI+
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+H LCK L DA++ FQ L L
Sbjct: 623 LHGLCKNKLTDDALQM--------------------------------FQNLCLM----- 645
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
+++ + +N++I+ G A F G +P+ TY + + QG L+E
Sbjct: 646 -DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
+ + G D I++ L G+I +A +L + EK E ++ ID
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 208/398 (52%), Gaps = 15/398 (3%)
Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
C + D + VI LC + AL + KM++ G PDV+T + L+N C+ +
Sbjct: 98 CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD 157
Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
A ++ +M EM P+ YN I G C++ ++ A+ LF M +G+R + VT+N LV
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
LC G DA + + +++ D +VIT T ++D + K G +A+ L+ +M ++
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRD---IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
+ D+ YN LING C++G + A M+ +G LPDV+TYNTL+N CK ++DE +
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
+ +++ G+ D I+Y TIIQG G A+E M + P+I I Y
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-----PNIRTYSILLY 389
Query: 412 GRCGD--LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLR 469
G C + + A + + M + ++ T+N +I C +G++ A L+ +
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVI-----HGMCKIGNVEDAWDLFRSLSC 444
Query: 470 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 507
+G+ PD+++YT +I G C + +++ ++ K+Q GL
Sbjct: 445 KGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 185/412 (44%), Gaps = 65/412 (15%)
Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
D+ ++N ++N LC+ A V+ +M + P+ T ++ I G+C+ N + A+ L
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
S M G RP+ V +N ++ CK GL+ DAV+
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE--------------------------- 195
Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
L++ M + ++ D V YN L+ G C +G S A M+ R +P+V
Sbjct: 196 -----------LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
IT+ +++ K+GK EA Y +++ V PD +Y ++I GLC+HG + +A++ L
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGAS 451
M+ K +P+ +N +I+G+ + + + M G+ + T+N +I +
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 452 ---------------------------CNLGHIHLALQLYDEMLRRGITPDIITYTELIK 484
C + AL L++ M + I DI TY +I
Sbjct: 365 PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 424
Query: 485 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
G C GN+++A ++F + GL D + + + + R ++ DK+ +++K
Sbjct: 425 GMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 135/286 (47%), Gaps = 6/286 (2%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+ D + +++ LC G+ A L R M+ + VP+V+T +++ K G +A
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+ EM+ P+ TYN+ I G C +D+A + M G P+ VT+N L++
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
CK + + K E+ D IT ++ YF+ G A +++ M + +
Sbjct: 325 CKSKRVDEGTKLFREMAQRG---LVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSR 378
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
+I Y++L+ G C+N + A F M K D+ TYN +++ +CK G +++A
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
+ LS G+ PD +SY T+I G C K+ M E ++P
Sbjct: 439 FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 156/376 (41%), Gaps = 82/376 (21%)
Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
+LE+ + +M + RP P+ ++ ++ + D + LF M GI + ++N
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
I+++ LC+ A+ +G+ M
Sbjct: 109 IVINCLCRCSRFVIALSVVGK--------------------------------------M 130
Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
+ + D+V + LINGFC + A +M + GF PDV+ YNT+++ CK G +
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190
Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
++A + + + GV D ++Y +++ GLC G A + M+ + +VP
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP-------- 242
Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEM 467
NV TF A+I + G A++LY+EM
Sbjct: 243 ---------------------------NVITFTAVIDVFVKE-----GKFSEAMKLYEEM 270
Query: 468 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 527
RR + PD+ TY LI G C G + EA+++ + T G D + + L + + K
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 528 DKA----RDIHQKWLL 539
D+ R++ Q+ L+
Sbjct: 331 DEGTKLFREMAQRGLV 346
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 42/254 (16%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
RC ++ D + ++I LC+ G++ A + M+ KG +PDV+T+N L+N CK ++
Sbjct: 273 RC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
+ + REM++ + TYN I GY + D A +FS M + RPN T++IL+
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL 388
Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
+ LC N +AL L+ +M +
Sbjct: 389 YGLC--------------------------------------MNWRVEKALVLFENMQKS 410
Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
I+ DI YN++I+G C G++ A+ F + +G PDV++Y T+++ C++ + D++
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Query: 351 SHFYGVLSKTGVAP 364
Y + + G+ P
Sbjct: 471 DLLYRKMQEDGLLP 484
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 195/379 (51%), Gaps = 8/379 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+IR C G I AL L KM KG +P+V+T+N L++ CK+ ++ ++R M+
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
PN +YN I G CR + + + + M G + VT+N L+ CK+G A+
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
E+L T VIT T L+ S K G+ +A+ + M + + + Y L+
Sbjct: 331 VMHAEMLRHG---LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+GF G ++ A+ +M GF P V+TYN L+N C GK+++A + + G++
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD +SY T++ G C D+ +A M+EK + P+ ++ +I G+ A +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 483
+ ML G+ + FT+ ALI A C G + ALQL++EM+ +G+ PD++TY+ LI
Sbjct: 508 YEEMLRVGLPPDEFTYTALI-----NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 484 KGHCARGNMKEAEEVFAKI 502
G + +EA+ + K+
Sbjct: 563 NGLNKQSRTREAKRLLLKL 581
Score = 199 bits (505), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 204/391 (52%), Gaps = 10/391 (2%)
Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
++M++ P+V T+N L+ C G+++ A + +M PN TYN I GYC++
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-D 260
++D L +MA G+ PN +++N++++ LC++G + + V F VL + + + S D
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE-VSF---VLTEMNRRGYSLD 309
Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
+T L+ Y K G+ QAL + +M + + ++ Y LI+ C G+++ A +
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
QM RG P+ TY TL++ ++G ++EA ++ G +P ++Y +I G C+ G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
+ A L M EK + P+ ++ ++ G+ R D+ A ++ M+ G+ + T++
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 441 ALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 500
+LI C A LY+EMLR G+ PD TYT LI +C G++++A ++
Sbjct: 490 SLI-----QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 501 KIQTLGLAIDHIPFRILKKRYRRMKESDKAR 531
++ G+ D + + +L + + +A+
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 206/426 (48%), Gaps = 13/426 (3%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I C KI L R M KG P+++++N ++N LC+ G +++ V+ EM+
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
S + TYN I GYC+ +AL + + M +G+ P+ +T+ L+H++CK G + A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
++FL ++ + T T L+D + + G +A + +M +V YN L
Sbjct: 365 MEFLDQMRVRG---LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
ING C+ G + A A M ++G PDV++Y+T+L+ C+ +DEA + + G+
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
PD I+Y ++IQG C +A + ML + P+ + +I+ Y GDL A
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDII----- 477
+ + M+ GV +V T++ LI + + L Y+E + +T +
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Query: 478 -----TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 532
+ LIKG C +G M EA++VF + D + I+ + R + KA
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 533 IHQKWL 538
++++ +
Sbjct: 662 LYKEMV 667
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 192/392 (48%), Gaps = 44/392 (11%)
Query: 148 GTVPDVLTHNYLVNELCKIG-DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
G +P VL++N +++ + ++ A++V +EM E + SPN TYN I G+C +D
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
AL LF M G PN VT+N L+ CK + D K
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFK---------------------- 261
Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
L M K ++ ++++YNV+ING C G + +M +RG
Sbjct: 262 ----------------LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
+ D +TYNTL+ CK+G +A + + + G+ P I+Y ++I +C G++ +A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
EFL M + + P + ++DG+ + G ++ A+ + M G S +V T+NALI
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI--- 422
Query: 447 TRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 506
C G + A+ + ++M +G++PD+++Y+ ++ G C ++ EA V ++ G
Sbjct: 423 --NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 507 LAIDHIPFRILKKRYRRMKESDKARDIHQKWL 538
+ D I + L + + + + +A D++++ L
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 173/348 (49%), Gaps = 18/348 (5%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ ++I +C G + A+ +M +G P+ T+ LV+ + G + +A V+REM+
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ SP+ TYNA I G+C +++ A+ + M G+ P+ V+++ ++ C+ +
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+A++ E++ + D IT + L+ + + +A L+ +M + + D Y
Sbjct: 468 EALRVKREMV---EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
LIN +C+ GD+ A +M+++G LPDV+TY+ L+N L KQ + EA L
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 361 GVAPDQISYKTIIQ---------------GLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
P ++Y T+I+ G C+ G + +A + SML K+ P+ +N
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYN 644
Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCN 453
++I G+ R GD+ A+++ M+ G + T AL+ A + N
Sbjct: 645 IMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 161/371 (43%), Gaps = 54/371 (14%)
Query: 97 NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
N++R D VR L + R + ++ G + A + R+M G P V+T+
Sbjct: 360 NMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
N L+N C G +E A V+ +M E SP+ +Y+ ++G+CR ++D+AL + M
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
GI+P+ +T++ L+ C++ +A E+L D T T L+++Y GD
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG---LPPDEFTYTALINAYCMEGD 535
Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLING------------------------------- 305
+AL L N+M +K + D+V Y+VLING
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 306 -------------------FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
FC+ G ++ A F ML + PD YN +++ C+ G
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
+ +A Y + K+G ++ +++ L G + + ++ +L + E V
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV 715
Query: 407 IIDGYGRCGDL 417
+++ R G++
Sbjct: 716 LVEINHREGNM 726
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 147/294 (50%), Gaps = 28/294 (9%)
Query: 77 SDNEGNPQAV-FNAL------DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLC 129
+DN +P V +NAL +++ + L+ M++ G L D + V+ C
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG-----LSPDVVSYSTVLSGFC 461
Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
+ AL ++R+M++KG PD +T++ L+ C+ ++A + EM + P+
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
TY A I YC +L+KAL L + M G+ P+ VT+++L++ L K+ +A + L ++
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 250 LADDDGKATSDVITSTI--------------LMDSYFKNGDKFQALALWNDMFQKNIQTD 295
++ SDV T+ L+ + G +A ++ M KN + D
Sbjct: 582 FYEES--VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
AYN++I+G C GDI A+ + +M+K GFL +T L+ L K+GK++E
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQ 462
++++++ Y R + A SI L + G V ++NA++ A R +I A
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR----NISFAEN 191
Query: 463 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 522
++ EML ++P++ TY LI+G C GN+ A +F K++T G + + + L Y
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 523 RMKESD 528
++++ D
Sbjct: 252 KLRKID 257
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 201 bits (512), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 212/413 (51%), Gaps = 8/413 (1%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
++ LC GK+ ++ +KG PD++T+N L++ G +E+A ++ M
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
SP TYN I G C+ + ++A +F+ M +G+ P+ T+ L+ CKKG + +
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
K ++ + D D++ + +M + ++G+ +AL +N + + + D V Y +LI
Sbjct: 361 KVFSDMRSRD---VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
G+C G IS A +ML++G DV+TYNT+L+ LCK+ L EA + +++ +
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD + +I G C G++ A E M EK + + +N ++DG+G+ GD+ A I
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 483
M+S + +++ L+ A C+ GH+ A +++DEM+ + I P ++ +I
Sbjct: 538 WADMVSKEILPTPISYSILV-----NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 484 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
KG+C GN + E K+ + G D I + L + R + KA + +K
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 203/418 (48%), Gaps = 6/418 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
VI LC GK A + +M++ G PD T+ L+ E CK GD+ + + V +M
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ +++ ++ + R LDKAL F+++ G+ P+ V + IL+ C+KG++ A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+ E+L DV+T ++ K +A L+N+M ++ + D +L
Sbjct: 430 MNLRNEMLQQG---CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I+G C G++ +A F +M ++ DV+TYNTLL+ K G +D A + + +
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
P ISY ++ LC G + +A M+ K++ P I N +I GY R G+ S+ S
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 482
+ M+S G + ++N LI R + + L ++ +E + G+ PD+ TY +
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKA-FGLVKKMEEE--QGGLVPDVFTYNSI 663
Query: 483 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 540
+ G C + MKEAE V K+ G+ D + + + +A IH + L R
Sbjct: 664 LHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 201/403 (49%), Gaps = 10/403 (2%)
Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
+R L D + +++ + C G + + M + VPD++ + +++ + G+L
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 391
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
+KA + E P+ Y I GYCR + A++L + M G + VT+N +
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+H LCK+ +LG+A K E+ + D T TIL+D + K G+ A+ L+ M +
Sbjct: 452 LHGLCKRKMLGEADKLFNEM---TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
K I+ D+V YN L++GF GDI +A + M+ + LP I+Y+ L+N LC +G L E
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
A + + + P + ++I+G C G+ FL M+ + VP+ +N +I
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 628
Query: 410 GYGRCGDLSNAFSIRDLMLS--FGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEM 467
G+ R ++S AF + M G+ +VFT+N+++ C + A + +M
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL-----HGFCRQNQMKEAEVVLRKM 683
Query: 468 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 510
+ RG+ PD TYT +I G ++ N+ EA + ++ G + D
Sbjct: 684 IERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 174/342 (50%), Gaps = 8/342 (2%)
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
NA I R+ ++ A ++ ++ +G+ N T NI+V+ALCK G + FL +V
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV-- 261
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
+ D++T L+ +Y G +A L N M K + YN +ING C +G
Sbjct: 262 -QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
A F +ML+ G PD TY +LL CK+G + E + + V PD + + +
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
++ G++ KA + S+ E ++P+ I+ ++I GY R G +S A ++R+ ML G
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 432 VSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 491
+ +V T+N ++ C + A +L++EM R + PD T T LI GHC GN
Sbjct: 441 CAMDVVTYNTIL-----HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 492 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 533
++ A E+F K++ + +D + + L + ++ + D A++I
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 130/287 (45%), Gaps = 30/287 (10%)
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
A ++ ++ + + ++ N+++N C +G + + Q+ ++G PD++TYNTL++
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
+G ++EA + G +P +Y T+I GLC HG +A+E ML + P
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGAS-------- 451
+ + ++ + GD+ + M S V ++ F++++ TR +
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 452 ----------------------CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 489
C G I +A+ L +EML++G D++TY ++ G C R
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 490 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
+ EA+++F ++ L D IL + ++ A ++ QK
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 142/310 (45%), Gaps = 21/310 (6%)
Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST---------------ILMDSYFK 273
++H L + G L DA L ++ G + +++ S +L+ +Y +
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRS-GVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQ 177
Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
+A + + K I A N LI G + A+ + ++ + G +V T
Sbjct: 178 ARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYT 237
Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
N ++N LCK GK+++ F + + GV PD ++Y T+I G + +A E + +M
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCN 453
K P + +N +I+G + G A + ML G+S + T+ +L++ +C
Sbjct: 298 GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM-----EACK 352
Query: 454 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 513
G + +++ +M R + PD++ ++ ++ GN+ +A F ++ GL D++
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 514 FRILKKRYRR 523
+ IL + Y R
Sbjct: 413 YTILIQGYCR 422
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 202/375 (53%), Gaps = 9/375 (2%)
Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
+M++ P++ T+N +VN CK+G++E+A+ + ++ E P+ TY + I GYC+
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
+LD A +F+ M G R N V + L+H LC + +A+ + + DD+ T V
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVK-MKDDECFPT--VR 324
Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
T T+L+ S + K +AL L +M + I+ +I Y VLI+ C A QM
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
L++G +P+VITYN L+N CK+G +++A ++ ++P+ +Y +I+G C ++
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNV 443
Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
KA L MLE+ V+P+ +N +IDG R G+ +A+ + LM G+ + +T+ ++
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 443 ILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 502
I + C + A L+D + ++G+ P+++ YT LI G+C G + EA + K+
Sbjct: 504 I-----DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 503 QTLGLAIDHIPFRIL 517
+ + + F L
Sbjct: 559 LSKNCLPNSLTFNAL 573
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 209/416 (50%), Gaps = 9/416 (2%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ +I LC+ +I A+ L KM P V T+ L+ LC +A ++++EM
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
E PN TY I C + +KA L M G+ PN +T+N L++ CK+G++
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
DAV + E++ + K + + T L+ Y K+ + +A+ + N M ++ + D+V YN
Sbjct: 411 DAVDVV-ELM--ESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYN 466
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
LI+G C +G+ SA+ M RG +PD TY ++++ LCK +++EA + L +
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
GV P+ + Y +I G C G + +A L ML K+ +P +N +I G G L A
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYT 480
+ + M+ G+ V T LI + G A + +ML G PD TYT
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKD-----GDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 481 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
I+ +C G + +AE++ AK++ G++ D + L K Y + +++ A D+ ++
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 223/484 (46%), Gaps = 52/484 (10%)
Query: 96 ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
E L+ +K M +TG ++ + + +I LC K A L +M++KG +P+V+T
Sbjct: 341 EALNLVKEMEETG-----IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
+N L+N CK G +E A V+ M + SPN TYN I GYC+ N + KA+ + + M
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454
Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV----LADDDGKATS------------ 259
+ P+ VT+N L+ C+ G A + L + L D TS
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 260 ----------------DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+V+ T L+D Y K G +A + M KN + + +N LI
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+G C +G + A +M+K G P V T L++ L K G D A + + +G
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD +Y T IQ C G ++ A + + M E V P+ ++ +I GYG G + AF +
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 424 RDLMLSFGVSSNVFTFNALI-------LAETRG------ASCNLGHIHLALQLYDEMLRR 470
M G + TF +LI + +G A N+ ++L ++M+
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Query: 471 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQ-TLGLAIDHIPFRILKKRYRRMKESDK 529
+TP+ +Y +LI G C GN++ AE+VF +Q G++ + F L ++K+ ++
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 530 ARDI 533
A +
Sbjct: 815 AAKV 818
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 167/343 (48%), Gaps = 9/343 (2%)
Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
YN + R +D+ ++ M + + PN T+N +V+ CK G + +A +++ +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
+ D T T L+ Y + D A ++N+M K + + VAY LI+G C+
Sbjct: 246 ---EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
I A F +M P V TY L+ LC + EA + + +TG+ P+ +Y
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
+I LC KARE L MLEK ++P +N +I+GY + G + +A + +LM S
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 431 GVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 490
+S N T+N LI + ++H A+ + ++ML R + PD++TY LI G C G
Sbjct: 423 KLSPNTRTYNELIKGYCK------SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 491 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 533
N A + + + GL D + + + K ++A D+
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 178/421 (42%), Gaps = 37/421 (8%)
Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
L M D G L D + ++I LC ++ A L + QKG P+V+ + L+
Sbjct: 485 LSLMNDRG-----LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
+ CK G +++A ++ +M PN T+NA I G C +L +A L M G++
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
P T IL+H L K G A ++L+ D T T + +Y + G A
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG---TKPDAHTYTTFIQTYCREGRLLDA 656
Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
+ M + + D+ Y+ LI G+ G + AF +M G P T+ +L+
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK---AREFLLSMLEKSV 397
L + YG + G P+ LC ++++ E L M+E SV
Sbjct: 717 LLEMK--------YG--KQKGSEPE----------LCAMSNMMEFDTVVELLEKMVEHSV 756
Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLML-SFGVSSNVFTFNALILAETRGASCNLGH 456
P + +I G G+L A + D M + G+S + FNAL+ C L
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL-----SCCCKLKK 811
Query: 457 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 516
+ A ++ D+M+ G P + + LI G +G + VF + G D + ++I
Sbjct: 812 HNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKI 871
Query: 517 L 517
+
Sbjct: 872 I 872
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 146/337 (43%), Gaps = 16/337 (4%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A+I LC GK+ A L KM++ G P V T L++ L K GD + A ++M
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA---LCKKGLL 239
P+ TY FI YCR L A + + M NG+ P+ T++ L+ L +
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN------------DM 287
D +K + + + +I + M + G + + A+ N M
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751
Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGK 346
+ ++ + +Y LI G C G++ A F M + G P + +N LL+C CK K
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKK 811
Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
+EA+ + G P S K +I GL G+ + ++L+ + W +
Sbjct: 812 HNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKI 871
Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
IIDG G+ G + + + ++M G + T++ LI
Sbjct: 872 IIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 120/294 (40%), Gaps = 25/294 (8%)
Query: 100 RLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYL 159
R + M +G + D + I+ C G++ A + KM + G PD+ T++ L
Sbjct: 624 RFQQMLSSGT-----KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT------------------GYCRV 201
+ +G A V++ M + P+ T+ + I +
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
E D + L M + + PN ++ L+ +C+ G L A K + ++G + S++
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH-MQRNEGISPSEL 797
Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
+ + L+ K +A + +DM + + VLI G G+ + F
Sbjct: 798 VFNA-LLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
+L+ G+ D + + +++ + KQG ++ + V+ K G +Y +I+G
Sbjct: 857 LLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQL 463
+N +++ R G + + ML V N++T+N ++ C LG++ A Q
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV-----NGYCKLGNVEEANQY 240
Query: 464 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 523
+++ G+ PD TYT LI G+C R ++ A +VF ++ G + + + L
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 524 MKESDKARDIHQK 536
+ D+A D+ K
Sbjct: 301 ARRIDEAMDLFVK 313
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 462 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 521
Q+Y EML + P+I TY +++ G+C GN++EA + +KI GL D + L Y
Sbjct: 204 QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY 263
Query: 522 RRMKESDKARDIHQKWLLR 540
+ K+ D A + + L+
Sbjct: 264 CQRKDLDSAFKVFNEMPLK 282
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 194/383 (50%), Gaps = 8/383 (2%)
Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
C K+ A K+++ G PD + N L+N LC + +A ++ M EM P
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT 192
Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
T N + G C ++ A+ L M G +PN VT+ +++ +CK G A++ L
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
++ ++ D + +I++D K+G A L+N+M K + DI+ YN LI GFC
Sbjct: 253 KM---EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
G M+KR P+V+T++ L++ K+GKL EA + + G+AP+ I
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
+Y ++I G C + +A + + M+ K P+ +N++I+GY + + + + M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 428 LSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 487
GV +N T+N L+ C G + +A +L+ EM+ R + PDI++Y L+ G C
Sbjct: 430 SLRGVIANTVTYNTLV-----QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 488 ARGNMKEAEEVFAKIQTLGLAID 510
G +++A E+F KI+ + +D
Sbjct: 485 DNGELEKALEIFGKIEKSKMELD 507
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 211/431 (48%), Gaps = 19/431 (4%)
Query: 90 LDLILKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
L+ + E L+ + M + G P TL T ++ LCL GK+ A+ L +M++
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNT-------LVNGLCLNGKVSDAVVLIDRMVET 222
Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
G P+ +T+ ++N +CK G A ++R+M E + Y+ I G C+ LD A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
+LF+ M G + + +T+N L+ C G D K L +++ K + +V+T ++L
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR---KISPNVVTFSVL 339
Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
+DS+ K G +A L +M Q+ I + + YN LI+GFC + A M+ +G
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
PD++T+N L+N CK ++D+ + +S GV + ++Y T++QG C G + A++
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG-VSSNVFTFNALILAE 446
M+ + V P+ + +++DG G+L A I FG + + + I
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI------FGKIEKSKMELDIGIYMI 513
Query: 447 TRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 506
CN + A L+ + +G+ D Y +I C + ++ +A+ +F K+ G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 507 LAIDHIPFRIL 517
A D + + IL
Sbjct: 574 HAPDELTYNIL 584
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 203/400 (50%), Gaps = 8/400 (2%)
Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
L L ++M KG + T + ++N C+ L A + ++ ++ P+ +N +
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166
Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
G C + +AL L M G +P +T N LV+ LC G + DAV + ++ + G
Sbjct: 167 GLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV--ETGF 224
Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
++V +L + K+G A+ L M ++NI+ D V Y+++I+G C +G + +AF
Sbjct: 225 QPNEVTYGPVL-NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
F +M +GF D+ITYNTL+ C G+ D+ + + K ++P+ +++ +I
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
G + +A + L M+++ + P +N +IDG+ + L A + DLM+S G ++
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 437 FTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 496
TFN LI C I L+L+ EM RG+ + +TY L++G C G ++ A+
Sbjct: 404 MTFNILI-----NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 497 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
++F ++ + + D + ++IL E +KA +I K
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 195/411 (47%), Gaps = 8/411 (1%)
Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
+G K A+ L R MIQ +P V+ N L + + K E + ++M + +
Sbjct: 65 VGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIY 124
Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
T + I +CR +L A + G P+ V N L++ LC + + +A++ + +
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELV-DR 183
Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
+ + K T +IT L++ NG A+ L + M + Q + V Y ++N C +
Sbjct: 184 MVEMGHKPT--LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
G + A +M +R D + Y+ +++ LCK G LD A + + + G D I+Y
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
T+I G C G + L M+++ + P ++V+ID + + G L A + M+
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 430 FGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 489
G++ N T+N+LI C + A+Q+ D M+ +G PDI+T+ LI G+C
Sbjct: 362 RGIAPNTITYNSLI-----DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 490 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 540
+ + E+F ++ G+ + + + L + + + + + A+ + Q+ + R
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 164/330 (49%), Gaps = 3/330 (0%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+ D + +I C G+ L R MI++ P+V+T + L++ K G L +AD
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+++EM + +PN TYN+ I G+C+ N L++A+ + M + G P+ +T NIL++
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
CK + D ++ E+ ++ +T L+ + ++G A L+ +M + ++
Sbjct: 414 CKANRIDDGLELFREMSLRG---VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
DIV+Y +L++G C NG++ A F ++ K D+ Y +++ +C K+D+A
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ L GV D +Y +I LC + KA M E+ P+ +N++I +
Sbjct: 531 FCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
D + A + + M S G ++V T +I
Sbjct: 591 DDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 38/280 (13%)
Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
GK+ A L ++M+Q+G P+ +T+N L++ CK LE+A ++ M P+ T+
Sbjct: 347 GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
N I GYC+ N +D L LF M+ G+ N VT+N LV C+ G L A K E+++
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
+ D+++ IL+D NG+ +AL ++ + + ++ DI Y ++I+G C
Sbjct: 467 R---RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK 523
Query: 312 ISSAFAYFC-----------------------------------QMLKRGFLPDVITYNT 336
+ A+ FC +M + G PD +TYN
Sbjct: 524 VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNI 583
Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
L+ A+ + +G D + K +I L
Sbjct: 584 LIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
+ +E D ++ +I +C K+ A L + KG D +N +++ELC+ L
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
KAD + R+M+E +P+ TYN I + ++ A L M ++G + T +++
Sbjct: 561 KADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Query: 231 HAL 233
+ L
Sbjct: 621 NML 623
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 195/397 (49%), Gaps = 11/397 (2%)
Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
GT +++ G +V N L+N+ CK G++ A V E+++ P ++N
Sbjct: 222 GTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTL 281
Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
I GYC+V LD+ L M + RP+ T++ L++ALCK+ + A E+
Sbjct: 282 INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR-- 339
Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
G +DVI +T L+ + +NG+ + M K +Q DIV YN L+NGFC NGD+ +
Sbjct: 340 GLIPNDVIFTT-LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
A M++RG PD ITY TL++ C+ G ++ A + + G+ D++ + ++
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 458
Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
G+C G ++ A L ML + P+ + +++D + + GD F + M S G
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 435 NVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 494
+V T+N L+ C LG + A L D ML G+ PD ITY L++GH N
Sbjct: 519 SVVTYNVLL-----NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN--- 570
Query: 495 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 531
+ + + + +G+ D ++ + R + + R
Sbjct: 571 SSKRYIQKPEIGIVADLASYKSIVNELDRASKDHRNR 607
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 173/348 (49%), Gaps = 11/348 (3%)
Query: 172 ADHVIREMSEMRPSPNCA-TYNAFITGYCRVNELDKALHLFSTMANNGIR-PNRVTHNIL 229
A V + EMR +P C +A + Y + + A+ F + P R N+L
Sbjct: 153 ASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLL 212
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ K G F E+L D +V ILM+ + K G+ A +++++ +
Sbjct: 213 -DRMMKLNPTGTIWGFYMEIL---DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK 268
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
+++Q +V++N LING+C G++ F QM K PDV TY+ L+N LCK+ K+D
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
A + + K G+ P+ + + T+I G +G+I +E ML K + P+ ++N +++
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLR 469
G+ + GDL A +I D M+ G+ + T+ LI RG G + AL++ EM +
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG-----GDVETALEIRKEMDQ 443
Query: 470 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 517
GI D + ++ L+ G C G + +AE ++ G+ D + + ++
Sbjct: 444 NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 5/223 (2%)
Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
+ + ++ ++L GF +V +N L+N CK+G + +A + ++K + P +S+ T+I
Sbjct: 223 TIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLI 282
Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
G C G++ + M + P+ ++ +I+ + + A + D M G+
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342
Query: 434 SNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 493
N F LI +R G I L + Y +ML +G+ PDI+ Y L+ G C G++
Sbjct: 343 PNDVIFTTLIHGHSRN-----GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 494 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
A + + GL D I + L + R + + A +I ++
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE 440
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 6/197 (3%)
Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
G +R L D + +I C GG + TAL +R++M Q G D + + LV +CK G
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
+ A+ +REM P+ TY + +C+ + L M ++G P+ VT+N
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524
Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
+L++ LCK G + +A L +L + D IT L++ + ++ + + ++
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAML---NIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI 581
Query: 288 FQKNIQTDIVAYNVLIN 304
I D+ +Y ++N
Sbjct: 582 ---GIVADLASYKSIVN 595
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
F + +L+ +++N++++ + + G++S+A + D + + V +FN LI
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLI---- 282
Query: 448 RGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 507
C +G++ +L +M + PD+ TY+ LI C M A +F ++ GL
Sbjct: 283 -NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGL 341
Query: 508 AIDHIPFRILKKRYRRMKESDKARDIHQKWL 538
+ + F L + R E D ++ +QK L
Sbjct: 342 IPNDVIFTTLIHGHSRNGEIDLMKESYQKML 372
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 211/455 (46%), Gaps = 38/455 (8%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ +I+ + G A+ + ++M ++G PD+ +N L+ L K +++A + EM
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
E PN TY AFI+GY +E A M G+ PN+V L++ CKKG +
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+A ++ D D T T+LM+ FKN A ++ +M K I D+ +Y
Sbjct: 575 EACSAYRSMV---DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
VLINGF G++ A + F +M++ G P+VI YN LL C+ G++++A +S
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
G+ P+ ++Y TII G C GD+ +A M K +VP+ ++ ++DG R D+ A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 421 FSIRDLMLSFGVSSNVFTFNALI-----LAETRGAS------------------------ 451
+I G +S+ FNALI +T +
Sbjct: 752 ITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 452 -----CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 506
C G++ A +L+ +M + P +ITYT L+ G+ G E VF + G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 507 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 541
+ DHI + ++ + + + KA + + +N
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 186/390 (47%), Gaps = 8/390 (2%)
Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
MI G +P + L+ C+ ++ + ++ EM + + TY + G C +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
LD A ++ M +G RPN V + L+ + GDA++ L E+ + G A D+
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM--KEQGIA-PDIFC 489
Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
L+ K +A + +M + ++ + Y I+G+ + +SA Y +M
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
+ G LP+ + L+N CK+GK+ EA Y + G+ D +Y ++ GL + +
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
A E M K + P+ + V+I+G+ + G++ A SI D M+ G++ NV +N L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 444 LAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 503
G C G I A +L DEM +G+ P+ +TY +I G+C G++ EA +F +++
Sbjct: 670 -----GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 504 TLGLAIDHIPFRILKKRYRRMKESDKARDI 533
GL D + L R+ + ++A I
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 181/406 (44%), Gaps = 16/406 (3%)
Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
AL L+ MI KG VP T++ L++ LCKI LE A ++ EM + S + TY+ I
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
G + D A L M ++GI ++ + + K+G++ A DG
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF-------DGM 373
Query: 257 ATSDVITST----ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
S +I L++ Y + + Q L +M ++NI Y ++ G C +GD+
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A+ +M+ G P+V+ Y TL+ + + +A + + G+APD Y ++
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I GL + +AR FL+ M+E + P + I GY + ++A M GV
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 433 SSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 492
N LI C G + A Y M+ +GI D TYT L+ G +
Sbjct: 554 LPNKVLCTGLI-----NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 493 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 538
+AEE+F +++ G+A D + +L + ++ KA I + +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 192/443 (43%), Gaps = 59/443 (13%)
Query: 101 LKTMRDTG----PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
+K MR+ G V CT +I + C GK+ A R M+ +G + D T+
Sbjct: 545 VKEMRECGVLPNKVLCT---------GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
L+N L K ++ A+ + REM +P+ +Y I G+ ++ + KA +F M
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
G+ PN + +N+L+ C+ G + A + L E+ + +T ++D Y K+GD
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG---LHPNAVTYCTIIDGYCKSGD 712
Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
+A L+++M K + D Y L++G C D+ A F K+G +N
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNA 771
Query: 337 LLNCLCKQGKLDEASHFY-----GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
L+N + K GK + + G + G P+ ++Y +I LC G++ A+E
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS---------NVF----- 437
M +++P + +++GY + G + F + D ++ G+ N F
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Query: 438 TFNALILAETRGA------SCNL---------------GHIHLALQLYDEMLRRGITPDI 476
T AL+L + A C L G + +A ++ + M+R PD
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950
Query: 477 ITYTELIKGHCARGNMK-EAEEV 498
T ELI C N + EA+ V
Sbjct: 951 ATVIELINESCISSNQRVEADAV 973
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 188/474 (39%), Gaps = 83/474 (17%)
Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT--------- 196
QK T + + ++L +LC G EKA V+ M E R P +++ +
Sbjct: 90 QKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIE-RNWPVAEVWSSIVRCSQEFVGKS 148
Query: 197 -----------GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG---LLGDA 242
GY +++A+ +FS+ + P +L+ AL + L D
Sbjct: 149 DDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDV 208
Query: 243 VKFLGEVLADDDGKATSDVITS-------TILMDSYFKNGDKFQ--------ALALWNDM 287
K + E D K +I + + D FK +F+ AL L M
Sbjct: 209 YKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM 268
Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN-------- 339
K + Y+VLI+G C + A + +M G D TY+ L++
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328
Query: 340 ------------------------CLC---KQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
C+C K+G +++A + + +G+ P +Y ++
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I+G C ++ + E L+ M ++++V P+ + ++ G GDL A++I M++ G
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 433 SSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 492
NV + LI +T + G A+++ EM +GI PDI Y LI G M
Sbjct: 449 RPNVVIYTTLI--KTFLQNSRFGD---AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 493 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE---SDK-ARDIHQKWLLRNK 542
EA ++ GL + + Y E +DK +++ + +L NK
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 211/417 (50%), Gaps = 8/417 (1%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I LC G++ A L+ +M +KG P T+ L+ LC G ++KA ++ EM
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
PN TY I G CR ++++A + M + I P+ +T+N L++ CK G + A
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ L + + +V T LM+ + G ++A+ L M + DIV+YNVLI
Sbjct: 392 ELLTVM---EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+G C G +++A+ M PD +T+ ++N CKQGK D AS F G++ + G++
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
D+++ T+I G+C G A L ++++ ++ PH NVI+D + + ++
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 483
+ G+ +V T+ L+ R G I + ++ + M G P++ YT +I
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRS-----GDITGSFRILELMKLSGCLPNVYPYTIII 623
Query: 484 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 540
G C G ++EAE++ + +Q G++ +H+ + ++ K Y + D+A + + + R
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 186/380 (48%), Gaps = 10/380 (2%)
Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
R + +I+ LC G I A L +MI +G P+V T+ L++ LC+ G +E+A+ V R+
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
M + R P+ TYNA I GYC+ + A L + M +PN T N L+ LC+ G
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
AV L +L D + D+++ +L+D + G A L + M +I+ D +
Sbjct: 422 PYKAVHLLKRML---DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
+ +IN FC G A A+ ML++G D +T TL++ +CK GK +A L
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGRCGDL 417
K + S I+ L G VK +L + K +VP + ++DG R GD+
Sbjct: 539 KMRILTTPHSLNVILDMLS-KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDII 477
+ +F I +LM G NV+ + +I C G + A +L M G++P+ +
Sbjct: 598 TGSFRILELMKLSGCLPNVYPYTIII-----NGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Query: 478 TYTELIKGHCARGNMKEAEE 497
TYT ++KG+ G + A E
Sbjct: 653 TYTVMVKGYVNNGKLDRALE 672
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 204/461 (44%), Gaps = 21/461 (4%)
Query: 31 LNVARIFSNSRTCSDDDNLPCTLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVFNAL 90
L V + S TC+ + L + VG + F KD E Q
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVG-----RLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 91 DLILKENLDR------LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
+++K DR + P C + + + +I LC GKI A + RKM
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGC--KPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
++ P V+T+N L+N CK G + A ++ M + PN T+N + G CRV +
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
KA+HL M +NG+ P+ V++N+L+ LC++G + A K L + D D +T
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD---IEPDCLTF 479
Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
T +++++ K G A A M +K I D V LI+G C G A ++K
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
L + N +L+ L K K+ E G ++K G+ P ++Y T++ GL GDI
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
+ L M +P + + +II+G + G + A + M GVS N T+ ++
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV- 658
Query: 445 AETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 485
N G + AL+ M+ RG + Y+ L++G
Sbjct: 659 ----KGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 176/357 (49%), Gaps = 13/357 (3%)
Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
R+M G V ++ + +VN LCK G E A+ + ++ ++ + + + G+CR
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRG 243
Query: 202 NELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK--AT 258
L AL +F M+ PN V+++IL+H LC+ G L +A L D G+
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG-----LKDQMGEKGCQ 298
Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
T T+L+ + G +A L+++M + + ++ Y VLI+G C +G I A
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
+M+K P VITYN L+N CK G++ A V+ K P+ ++ +++GLC
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
G KA L ML+ + P+ +NV+IDG R G ++ A+ + M F + + T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 439 FNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 495
F A+I A C G +A MLR+GI+ D +T T LI G C G ++A
Sbjct: 479 FTAII-----NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 171/356 (48%), Gaps = 11/356 (3%)
Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
+RE+ R + C Y++ + +++ A + M +G + + +V+ALCK
Sbjct: 150 LREVFGFRLNYPC--YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCK 207
Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQT 294
G A F+ ++L G I +++L+ + + + AL +++ M ++
Sbjct: 208 NGYTEAAEMFMSKIL--KIGFVLDSHIGTSLLL-GFCRGLNLRDALKVFDVMSKEVTCAP 264
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
+ V+Y++LI+G C G + AF QM ++G P TY L+ LC +G +D+A + +
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
+ G P+ +Y +I GLC G I +A M++ + P +N +I+GY +
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITP 474
G + AF + +M NV TFN L+ C +G + A+ L ML G++P
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELM-----EGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 475 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 530
DI++Y LI G C G+M A ++ + + + D + F + + + ++D A
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 112/276 (40%), Gaps = 8/276 (2%)
Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
LK M D G L D + +I LC G + TA L M PD LT ++
Sbjct: 429 LKRMLDNG-----LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
N CK G + A + M S + T I G C+V + AL + T+ I
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
+ N+++ L K + + + LG++ + V+T T L+D ++GD +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKI---NKLGLVPSVVTYTTLVDGLIRSGDITGS 600
Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
+ M ++ Y ++ING C G + A M G P+ +TY ++
Sbjct: 601 FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
GKLD A + + G + Y +++QG
Sbjct: 661 YVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 26/290 (8%)
Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
G K+ L + K+ + G VP V+T+ LV+ L + GD+ + ++ M PN
Sbjct: 559 GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP 618
Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
Y I G C+ +++A L S M ++G+ PN VT+ ++V G L A++ + ++
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678
Query: 251 ADDDGKATSDVITSTILMDSYF-KNGDKFQALALWNDMFQKNIQTDIVAYNVLIN----- 304
+ G +D I S++L + G + +D+ + +TD N LI+
Sbjct: 679 --ERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALR--ETDPECINELISVVEQL 734
Query: 305 GFCLNGDISSAFAYFCQ-------------MLKRG-FLPDVITYNTLLNCLCKQGKLDEA 350
G C++G C+ +L+RG FL + + ++ C + K +
Sbjct: 735 GGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM--DIIMESYCSKKKHTKC 792
Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
++ K+G P S+ +IQGL GD +ARE ++ +L + V E
Sbjct: 793 MELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVE 842
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 200/440 (45%), Gaps = 45/440 (10%)
Query: 94 LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
K ++ L M+ G ++ D + +I DLC +I L R M ++ P+
Sbjct: 244 FKAAIELLDHMKSKG-----VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
+T+N L+N G + A ++ EM SPN T+NA I G+ +AL +F
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
M G+ P+ V++ +L+ LCK A F + +G IT T ++D K
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM--KRNGVCVGR-ITYTGMIDGLCK 415
Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
NG +A+ L N+M + I DIV Y+ LINGFC G +A C++ + G P+ I
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475
Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
Y+TL+ C+ G L EA Y + G D ++ ++ LC G + +A EF+ M
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535
Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG---- 449
++P ++ +I+GYG G+ AFS+ D M G FT+ +L+ +G
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595
Query: 450 --------------------------ASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 483
A C G++ A+ L+ EM++R I PD TYT LI
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 484 KGHCARGNM-------KEAE 496
G C +G KEAE
Sbjct: 656 SGLCRKGKTVIAILFAKEAE 675
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 190/401 (47%), Gaps = 13/401 (3%)
Query: 136 TALW-LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
++W ++M+++ PDV T N L+N LC G EK+ +++++M + +P TYN
Sbjct: 175 VSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTV 234
Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
+ YC+ A+ L M + G+ + T+N+L+H LC+ + G +L D
Sbjct: 235 LHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK-----GYLLLRDM 289
Query: 255 GKAT--SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
K + +T L++ + G A L N+M + + V +N LI+G G+
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A F M +G P ++Y LL+ LCK + D A FY + + GV +I+Y +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I GLC +G + +A L M + + P+ ++ +I+G+ + G A I + G+
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 433 SSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 492
S N ++ LI C +G + A+++Y+ M+ G T D T+ L+ C G +
Sbjct: 470 SPNGIIYSTLIYN-----CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 493 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 533
EAEE + + G+ + + F L Y E KA +
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 565
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 185/419 (44%), Gaps = 47/419 (11%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+IR G I +L + R M G P V T N ++ + K G+ ++EM + +
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ AT+N I C +K+ +L M +G P VT+N ++H CKKG
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG------ 242
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
FK A+ L + M K + D+ YN+LI
Sbjct: 243 ---------------------------RFK-----AAIELLDHMKSKGVDADVCTYNMLI 270
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+ C + I+ + M KR P+ +TYNTL+N +GK+ AS + G++
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG--DLSNAF 421
P+ +++ +I G G+ +A + M K + P + V++DG + DL+ F
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 481
+R M GV T+ +I C G + A+ L +EM + GI PDI+TY+
Sbjct: 391 YMR--MKRNGVCVGRITYTGMI-----DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Query: 482 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 540
LI G C G K A+E+ +I +GL+ + I + L RM +A I++ +L
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 502
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 189/413 (45%), Gaps = 9/413 (2%)
Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
LC + A +M + G +T+ +++ LCK G L++A ++ EMS+ P+
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
TY+A I G+C+V A + + G+ PN + ++ L++ C+ G L +A++
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497
Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
++ + T D T +L+ S K G +A M I + V+++ LING+
Sbjct: 498 AMILEGH---TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG 554
Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
+G+ AF+ F +M K G P TY +LL LCK G L EA F L A D +
Sbjct: 555 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 614
Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
Y T++ +C G++ KA M+++S++P+ + + +I G R G A
Sbjct: 615 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEA 674
Query: 428 LSFG-VSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 486
+ G V N + + + G + ++M G TPDI+T +I G+
Sbjct: 675 EARGNVLPNKVMYTCFVDGMFKA-----GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729
Query: 487 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 539
G +++ ++ ++ + + IL Y + K+ + +++ +L
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 782
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 178/409 (43%), Gaps = 43/409 (10%)
Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
G+ ++ R +M G PD++T N +++ ++G +EK + ++ EM PN T
Sbjct: 697 AGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 756
Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
YN + GY + ++ + L+ ++ NGI P+++T + LV +C+ +L +K L +
Sbjct: 757 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 816
Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
+ ++ D +N+LI+ C NG
Sbjct: 817 C--------------------------------------RGVEVDRYTFNMLISKCCANG 838
Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
+I+ AF M G D T + +++ L + + E+ +SK G++P+ Y
Sbjct: 839 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 898
Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
+I GLC GDI A M+ + P + ++ +CG A + ML
Sbjct: 899 GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 958
Query: 431 GVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 490
+ + +F L+ C G++ AL+L M G+ D+++Y LI G CA+G
Sbjct: 959 KLVPTIASFTTLM-----HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1013
Query: 491 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 539
+M A E++ +++ G + ++ L + + + DI K LL
Sbjct: 1014 DMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLL 1062
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 195/432 (45%), Gaps = 46/432 (10%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
++++ LC GG + A + + D + +N L+ +CK G+L KA + EM +
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFS--TMANNGIRPNRVTHNILVHALCKKGLLG 240
P+ TY + I+G CR + A+ LF+ A + PN+V + V + K G
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 701
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+ F ++ D+ T D++T+ ++D Y + G + L +M +N ++ YN
Sbjct: 702 AGIYFREQM---DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 758
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
+L++G+ D+S++F + ++ G LPD +T ++L+ +C+ L+
Sbjct: 759 ILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 818
Query: 361 GVAPDQISYKTIIQGLCIHG------DIVK-----------------------------A 385
GV D+ ++ +I C +G D+VK +
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
R L M ++ + PE + +I+G R GD+ AF +++ M++ + +A++ A
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 446 ETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 505
A C G A L ML+ + P I ++T L+ C GN+ EA E+ +
Sbjct: 939 L---AKC--GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNC 993
Query: 506 GLAIDHIPFRIL 517
GL +D + + +L
Sbjct: 994 GLKLDLVSYNVL 1005
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 157/345 (45%), Gaps = 27/345 (7%)
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
+ A H+++E+S M + + A +T Y N N ++IL
Sbjct: 89 DPARHILKELSLM-SGKSSFVFGALMTTYRLCNS------------------NPSVYDIL 129
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ ++G++ D+++ L G S V T ++ S K+G+ + +M +
Sbjct: 130 IRVYLREGMIQDSLEIFR--LMGLYGFNPS-VYTCNAILGSVVKSGEDVSVWSFLKEMLK 186
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
+ I D+ +N+LIN C G + +M K G+ P ++TYNT+L+ CK+G+
Sbjct: 187 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 246
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
A + GV D +Y +I LC I K L M ++ + P +N +I+
Sbjct: 247 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 306
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLR 469
G+ G + A + + MLSFG+S N TFNALI + G+ AL+++ M
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI-----DGHISEGNFKEALKMFYMMEA 361
Query: 470 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 514
+G+TP ++Y L+ G C A + +++ G+ + I +
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 406
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 167/401 (41%), Gaps = 47/401 (11%)
Query: 114 LETDYRRHV---AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
LE R H ++ LC GK+ A R M G +P+ ++ + L+N G+
Sbjct: 501 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 560
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
KA V EM+++ P TY + + G C+ L +A ++ + V +N L+
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 620
Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
A+CK G L AV GE M Q+
Sbjct: 621 TAMCKSGNLAKAVSLFGE--------------------------------------MVQR 642
Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG-FLPDVITYNTLLNCLCKQGKLDE 349
+I D Y LI+G C G A + + RG LP+ + Y ++ + K G+
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
+F + G PD ++ +I G G I K + L M ++ P +N+++
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLR 469
GY + D+S +F + ++ G+ + T ++L+L C + + L++ +
Sbjct: 763 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL-----GICESNMLEIGLKILKAFIC 817
Query: 470 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 510
RG+ D T+ LI CA G + A ++ + +LG+++D
Sbjct: 818 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 111/242 (45%), Gaps = 8/242 (3%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E D +I C G+I A L + M G D T + +V+ L + +++
Sbjct: 820 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
V+ EMS+ SP Y I G CRV ++ A + M + I P V + +V AL
Sbjct: 880 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
K G +A L +L K + + T LM KNG+ +AL L M ++
Sbjct: 940 AKCGKADEATLLLRFML---KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 996
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
D+V+YNVLI G C GD++ AF + +M GFL + TY L+ +G L + F
Sbjct: 997 LDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI-----RGLLARETAF 1051
Query: 354 YG 355
G
Sbjct: 1052 SG 1053
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 115/254 (45%), Gaps = 3/254 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+++ +C + L + + I +G D T N L+++ C G++ A +++ M+ +
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
S + T +A ++ R + ++ + M+ GI P + L++ LC+ G + A
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
E++A K + + ++ + K G +A L M + + I ++ L
Sbjct: 914 FVVKEEMIAH---KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 970
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
++ C NG++ A M G D+++YN L+ LC +G + A Y + G
Sbjct: 971 MHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1030
Query: 363 APDQISYKTIIQGL 376
+ +YK +I+GL
Sbjct: 1031 LANATTYKALIRGL 1044
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 76/193 (39%), Gaps = 40/193 (20%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+ + R+++ +I LC G I TA ++ +MI P + + +V L K G ++A
Sbjct: 890 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949
Query: 174 HVIREMSEMRPSP-----------------------------NCA------TYNAFITGY 198
++R M +M+ P NC +YN ITG
Sbjct: 950 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
C ++ A L+ M +G N T+ L+ +GLL F G + D A
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALI-----RGLLARETAFSGADIILKDLLAR 1064
Query: 259 SDVITSTILMDSY 271
+ + ++ DS+
Sbjct: 1065 GFITSMSLSQDSH 1077
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 191/380 (50%), Gaps = 8/380 (2%)
Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
C ++ AL KMI+ G P ++T L+N C+ + A ++ +M M PN
Sbjct: 126 FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPN 185
Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
YN I G C+ ++D AL L + M +GI P+ VT+N L+ LC G DA + +
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245
Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
+ + DV T L+D+ K G +A + +M ++++ DIV Y++LI G C
Sbjct: 246 CMTKRE---IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
+ + A F M+ +G PDV+TY+ L+N CK K++ + +S+ GV + +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
+Y +IQG C G + A E M+ V P +NV++ G G + A I M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 428 LSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 487
G+ +++ T+N +I RG C G + A +Y + +G+ PDI TYT ++ G
Sbjct: 423 QKNGMDADIVTYNIII----RGM-CKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Query: 488 ARGNMKEAEEVFAKIQTLGL 507
+G +EA+ +F K++ G+
Sbjct: 478 KKGLRREADALFRKMKEDGI 497
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 201/417 (48%), Gaps = 13/417 (3%)
Query: 94 LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
L ++LD M P+ D+ R ++ I + K ++L +M G ++
Sbjct: 62 LDDSLDLFFHMVQCRPLPSI--ADFSRLLSAISKM---KKYDVVIYLWEQMQMLGIPHNL 116
Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
T N L+N C+ L A + +M ++ P+ T+ + + G+CR + + AL++F
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
M G +PN V +N ++ LCK + +A+ L + D G DV+T L+
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG---PDVVTYNSLISGLCS 233
Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
+G A + + M ++ I D+ +N LI+ G +S A ++ +M++R PD++T
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
Y+ L+ LC +LDEA +G + G PD ++Y +I G C + + M
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCN 453
++ VV + ++I GY R G L+ A I M+ GV N+ T+N L+ C+
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL-----HGLCD 408
Query: 454 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 510
G I AL + +M + G+ DI+TY +I+G C G + +A +++ + GL D
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 177/353 (50%), Gaps = 8/353 (2%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+++ C G ++ AL++ +M+ G P+V+ +N +++ LCK ++ A ++ M +
Sbjct: 156 SLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ TYN+ I+G C A + S M I P+ T N L+ A K+G + +A
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
+F E++ D++T ++L+ +A ++ M K D+V Y++L
Sbjct: 276 EEFYEEMIRR---SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
ING+C + + FC+M +RG + + +TY L+ C+ GKL+ A + + GV
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
P+ I+Y ++ GLC +G I KA L M + + + +N+II G + G++++A+
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWD 452
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPD 475
I + G+ +++T+ ++L + G A L+ +M GI P+
Sbjct: 453 IYCSLNCQGLMPDIWTYTTMMLGLYKK-----GLRREADALFRKMKEDGILPN 500
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 167/361 (46%), Gaps = 43/361 (11%)
Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
M + RP P+ A ++ ++ ++ + D ++L+ M GI N T NIL++ C+
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
L A+ FLG+ M + + IV
Sbjct: 132 LSLALSFLGK--------------------------------------MIKLGHEPSIVT 153
Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
+ L+NGFC + A F QM+ G+ P+V+ YNT+++ LCK ++D A +
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
K G+ PD ++Y ++I GLC G A + M ++ + P+ +N +ID + G +S
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIIT 478
A + M+ + ++ T++ LI C + A +++ M+ +G PD++T
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYG-----LCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 479 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 538
Y+ LI G+C ++ ++F ++ G+ + + + IL + Y R + + A +I ++ +
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 539 L 539
Sbjct: 389 F 389
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 123/235 (52%), Gaps = 3/235 (1%)
Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
G++ A +MI++ PD++T++ L+ LC L++A+ + M P+ TY
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
+ I GYC+ +++ + LF M+ G+ N VT+ IL+ C+ G L A + ++
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
++IT +L+ NG +AL + DM + + DIV YN++I G C G+
Sbjct: 390 ---CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
++ A+ +C + +G +PD+ TY T++ L K+G EA + + + G+ P++
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 5/223 (2%)
Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
F M++ LP + ++ LL+ + K K D + + + G+ + + ++ C
Sbjct: 69 FFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCR 128
Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
+ A FL M++ P + +++G+ R + +A + D M+ G NV
Sbjct: 129 CSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVI 188
Query: 439 FNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 498
+N +I C + AL L + M + GI PD++TY LI G C+ G +A +
Sbjct: 189 YNTII-----DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 499 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 541
+ + + D F L + +A + +++ + R+
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 194/388 (50%), Gaps = 10/388 (2%)
Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
D +I C ++ AL KM++ G P ++T LVN C + +A ++
Sbjct: 113 DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV 172
Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
++ + PN YN I C +++ AL + M GIRP+ VT+N L+ L
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHS 232
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
G G + + L +++ + DVIT + L+D Y K G +A +N+M Q+++ +I
Sbjct: 233 GTWGVSARILSDMMRMG---ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI 289
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
V YN LING C++G + A ++ +GF P+ +TYNTL+N CK ++D+ V
Sbjct: 290 VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCV 349
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
+S+ GV D +Y T+ QG C G A + L M+ V P+ + +N+++DG G
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK 409
Query: 417 LSNAF-SIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPD 475
+ A + DL S V + T+N +I C + A L+ + +G++PD
Sbjct: 410 IGKALVRLEDLQKSKTV-VGIITYNIII-----KGLCKADKVEDAWYLFCSLALKGVSPD 463
Query: 476 IITYTELIKGHCARGNMKEAEEVFAKIQ 503
+ITY ++ G + +EA E++ K+Q
Sbjct: 464 VITYITMMIGLRRKRLWREAHELYRKMQ 491
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 161/340 (47%), Gaps = 8/340 (2%)
Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
+M+E P P+ ++ + ++N+ + + LF + GI + + L+ C+
Sbjct: 69 DMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCA 128
Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
L A+ LG+++ ++T L++ + ++A++L + + + ++V
Sbjct: 129 RLSLALSCLGKMMKLG---FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVV 185
Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
YN +I+ C G +++A M K G PDV+TYN+L+ L G ++ +
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245
Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
+ G++PD I++ +I G +++A++ M+++SV P +N +I+G G L
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLL 305
Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDII 477
A + ++++S G N T+N LI C + +++ M R G+ D
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLI-----NGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 478 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 517
TY L +G+C G AE+V ++ + G+ D F IL
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNIL 400
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 98 LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
LD LK M+ G + D + ++I L G G + + M++ G PDV+T +
Sbjct: 204 LDVLKHMKKMG-----IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFS 258
Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
L++ K G L +A EM + +PN TYN+ I G C LD+A + + + +
Sbjct: 259 ALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK 318
Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
G PN VT+N L++ CK + D +K L + DG D T L Y + G
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKIL--CVMSRDG-VDGDTFTYNTLYQGYCQAGKF 375
Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
A + M + D+ +N+L++G C +G I A + K + +ITYN +
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNII 435
Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
+ LCK K+++A + + L+ GV+PD I+Y T++ GL
Sbjct: 436 IKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 117/237 (49%), Gaps = 7/237 (2%)
Query: 132 GKIGTALWLRRK---MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
GK G L +++ MIQ+ P+++T+N L+N LC G L++A V+ + PN
Sbjct: 265 GKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNA 324
Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
TYN I GYC+ +D + + M+ +G+ + T+N L C+ G A K LG
Sbjct: 325 VTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGR 384
Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
+++ D+ T IL+D +G +AL D+ + I+ YN++I G C
Sbjct: 385 MVS---CGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCK 441
Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT-GVAP 364
+ A+ FC + +G PDVITY T++ L ++ EA Y + K G+ P
Sbjct: 442 ADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 6/259 (2%)
Query: 276 DKFQA-LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
+K++A ++L+ + I D+ ++ LI+ FC +S A + +M+K GF P ++T+
Sbjct: 93 NKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTF 152
Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
+L+N C + EA + G P+ + Y TII LC G + A + L M +
Sbjct: 153 GSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKK 212
Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNL 454
+ P+ +N +I G + I M+ G+S +V TF+ALI + G
Sbjct: 213 MGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI--DVYGKE--- 267
Query: 455 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 514
G + A + Y+EM++R + P+I+TY LI G C G + EA++V + + G + + +
Sbjct: 268 GQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTY 327
Query: 515 RILKKRYRRMKESDKARDI 533
L Y + K D I
Sbjct: 328 NTLINGYCKAKRVDDGMKI 346
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 5/227 (2%)
Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
A FC M + LP ++ ++ LL + K K + + L G++ D S+ T+I
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
C + A L M++ P + +++G+ A S+ D ++ G
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 435 NVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 494
NV +N +I + C G ++ AL + M + GI PD++TY LI G
Sbjct: 183 NVVIYNTII-----DSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 495 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 541
+ + + + +G++ D I F L Y + + +A+ + + + R+
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS 284
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 66/125 (52%)
Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
C GK A + +M+ G PD+ T N L++ LC G + KA + ++ + +
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGI 429
Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
TYN I G C+ ++++ A +LF ++A G+ P+ +T+ ++ L +K L +A + +
Sbjct: 430 ITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRK 489
Query: 249 VLADD 253
+ +D
Sbjct: 490 MQKED 494
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
V C + D ++ LC GKIG AL + + TV ++T+N ++ LCK +
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA-NNGIRP 221
E A ++ ++ SP+ TY + G R +A L+ M +G+ P
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 193/393 (49%), Gaps = 7/393 (1%)
Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
KM G PDV T N L+ LC+ L A ++ +M P+ T+ + GY
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
+LD AL + M G + V+ N++VH CK+G + DA+ F+ E +++ DG D
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE-MSNQDG-FFPDQY 296
Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
T L++ K G A+ + + M Q+ D+ YN +I+G C G++ A QM
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
+ R P+ +TYNTL++ LCK+ +++EA+ VL+ G+ PD ++ ++IQGLC+ +
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
A E M K P+ +N++ID G L A ++ M G + +V T+N L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 443 ILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 502
I C A +++DEM G++ + +TY LI G C +++A ++ ++
Sbjct: 477 I-----DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 503 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 535
G D + L + R + KA DI Q
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 205/430 (47%), Gaps = 9/430 (2%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
L D + V++ G + AL +R +M++ G ++ N +V+ CK G +E A
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 174 HVIREMSEMRPS-PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
+ I+EMS P+ T+N + G C+ + A+ + M G P+ T+N ++
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
LCK G + +AV+ L +++ D + + +T L+ + K +A L + K I
Sbjct: 340 LCKLGEVKEAVEVLDQMITRD---CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
D+ +N LI G CL + A F +M +G PD TYN L++ LC +GKLDEA +
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
+ +G A I+Y T+I G C +A E M V +N +IDG
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGI 472
+ + +A + D M+ G + +T+N+L+ RG G I A + M G
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG-----GDIKKAADIVQAMTSNGC 571
Query: 473 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 532
PDI+TY LI G C G ++ A ++ IQ G+ + + + + R +++ +A +
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 533 IHQKWLLRNK 542
+ ++ L +N+
Sbjct: 632 LFREMLEQNE 641
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 185/372 (49%), Gaps = 8/372 (2%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
+ D + +VI LC G++ A+ + +MI + P+ +T+N L++ LCK +E+A
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
+ R ++ P+ T+N+ I G C A+ LF M + G P+ T+N+L+ +LC
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
KG L +A+ L ++ + G A S VIT L+D + K +A ++++M +
Sbjct: 447 SKGKLDEALNMLKQM--ELSGCARS-VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
+ V YN LI+G C + + A QM+ G PD TYN+LL C+ G + +A+
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
++ G PD ++Y T+I GLC G + A + L S+ K + PH +N +I G R
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRK 623
Query: 415 GDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGIT 473
+ A ++ R+++ + ++ + RG G I A+ E+L +G
Sbjct: 624 RKTTEAINLFREMLEQNEAPPDAVSYRIVF----RGLCNGGGPIREAVDFLVELLEKGFV 679
Query: 474 PDIITYTELIKG 485
P+ + L +G
Sbjct: 680 PEFSSLYMLAEG 691
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 169/349 (48%), Gaps = 9/349 (2%)
Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
P+ YN + N L + M+ GI+P+ T N+L+ ALC+ L A+
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
L ++ + D T T +M Y + GD AL + M + V+ NV+++G
Sbjct: 212 LEDMPS---YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 306 FCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
FC G + A + +M + GF PD T+NTL+N LCK G + A V+ + G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
D +Y ++I GLC G++ +A E L M+ + P +N +I + + A +
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 425 DLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 484
++ S G+ +V TFN+LI +G H +A++L++EM +G PD TY LI
Sbjct: 389 RVLTSKGILPDVCTFNSLI----QGLCLTRNH-RVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 485 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 533
C++G + EA + +++ G A I + L + + ++ +A +I
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 95/228 (41%), Gaps = 41/228 (17%)
Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
G PD YN +LN L L + +S G+ PD ++ +I+ LC + A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS-SNV-------- 436
L M +VP+ + ++ GY GDL A IR+ M+ FG S SNV
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 437 ---------------------------FTFNALILAETRGASCNLGHIHLALQLYDEMLR 469
+TFN L+ C GH+ A+++ D ML+
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV-----NGLCKAGHVKHAIEIMDVMLQ 323
Query: 470 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 517
G PD+ TY +I G C G +KEA EV ++ T + + + + L
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 7/204 (3%)
Query: 337 LLNCLCKQGKLDEASHFYGVLSK-TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
LL+ L Q A + + SK +P+ Y+ I+ L G ++ L M
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML-SFGVSSNVFTFNALILAETRGASCNL 454
+ ++I+ Y + S+ D M+ FG+ + +N ++ G S L
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172
Query: 455 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 514
I A +M GI PD+ T+ LIK C ++ A + + + GL D F
Sbjct: 173 VEISHA-----KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTF 227
Query: 515 RILKKRYRRMKESDKARDIHQKWL 538
+ + Y + D A I ++ +
Sbjct: 228 TTVMQGYIEEGDLDGALRIREQMV 251
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 188/365 (51%), Gaps = 8/365 (2%)
Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
KM++ G P ++T L+N C+ ++A ++ M PN YN I G C+
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
+L+ AL +F M GIR + VT+N L+ L G DA + L +++ K +VI
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR---KIDPNVI 255
Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
T L+D++ K G+ +A L+ +M ++++ ++ YN LINGFC++G + A F M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
+ +G PDV+TYNTL+ CK ++++ + ++ G+ D +Y T+I G C G +
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
A++ M++ V P+ +N+++D G + A + + + + ++ T+N +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 443 ILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 502
I C + A L+ + R+G+ PD I Y +I G C +G +EA+++ ++
Sbjct: 436 I-----QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Query: 503 QTLGL 507
+ G
Sbjct: 491 KEDGF 495
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 203/425 (47%), Gaps = 26/425 (6%)
Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
D+ R + VI + K ++L KM G D+ + L++ C+ L A +
Sbjct: 80 VDFTRVLTVIAKM---NKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
+ +M ++ P+ T + + G+C+ N +A+ L +M G PN V +N +++ LCK
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 236 KGLLGDAVKFLGEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
L +A+ EV + K +D +T L+ +G A L DM ++ I
Sbjct: 197 NRDLNNAL----EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
+++ + LI+ F G++ A + +M++R +P+V TYN+L+N C G L +A + +
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
++ G PD ++Y T+I G C + + M + +V + +N +I GY +
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITP 474
G L+ A + + M+ GVS ++ T+N L+ CN G I AL + +++ + +
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILL-----DCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 475 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF-------------RILKKRY 521
DIITY +I+G C +KEA +F + G+ D I + R K
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 522 RRMKE 526
RRMKE
Sbjct: 488 RRMKE 492
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 189/366 (51%), Gaps = 14/366 (3%)
Query: 156 HNY---LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
H+Y L NEL I + A + EM + RP P+ + +T ++N+ D ++L+
Sbjct: 45 HHYRERLRNELHCI-KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYH 103
Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
M N GI + + IL+H C+ L A+ LG+++ G S V ++L + F
Sbjct: 104 KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMK--LGFRPSIVTLGSLL--NGF 159
Query: 273 KNGDKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
G++FQ A++L + M ++V YN +ING C N D+++A F M K+G D
Sbjct: 160 CQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADA 219
Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
+TYNTL++ L G+ +A+ + K + P+ I + +I G++++AR
Sbjct: 220 VTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE 279
Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGAS 451
M+ +SVVP +N +I+G+ G L +A + DLM+S G +V T+N LI
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT-----GF 334
Query: 452 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 511
C + ++L+ EM +G+ D TY LI G+C G + A++VF ++ G++ D
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 512 IPFRIL 517
+ + IL
Sbjct: 395 VTYNIL 400
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 195/398 (48%), Gaps = 11/398 (2%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K A L +M+Q +P ++ ++ + K+ + ++ +M + S + ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
I +CR + L AL L M G RP+ VT L++ C+ +AV + + D
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM--D 176
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
G + VI +T++ + KN D AL ++ M +K I+ D V YN LI+G +G
Sbjct: 177 GFGFVPNVVIYNTVI-NGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
+ A M+KR P+VI + L++ K+G L EA + Y + + V P+ +Y ++
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I G CIHG + A+ M+ K P+ +N +I G+ + + + + M G+
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 433 SSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 492
+ FT+N LI C G +++A ++++ M+ G++PDI+TY L+ C G +
Sbjct: 356 VGDAFTYNTLI-----HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 493 KEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKES 527
++A + +Q + +D I + I+ + R ++KE+
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 3/292 (1%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+ D + +I L G+ A L R M+++ P+V+ L++ K G+L +A
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ +EM PN TYN+ I G+C L A ++F M + G P+ VT+N L+
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
CK + D +K E+ D T L+ Y + G A ++N M +
Sbjct: 335 CKSKRVEDGMKLFCEMTYQG---LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
DIV YN+L++ C NG I A + K D+ITYN ++ LC+ KL EA
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 451
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
+ L++ GV PD I+Y T+I GLC G +A + M E +P I++
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 111/218 (50%), Gaps = 7/218 (3%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
++I C+ G +G A ++ M+ KG PDV+T+N L+ CK +E + EM+
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ TYN I GYC+ +L+ A +F+ M + G+ P+ VT+NIL+ LC G + A
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 243 VKFLGEVLADDDGKATSDV--ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+ V+ +D K+ DV IT I++ + +A L+ + +K ++ D +AY
Sbjct: 414 L-----VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYI 468
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
+I+G C G A +M + GF+P Y+ L
Sbjct: 469 TMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
V C + D + ++ LC GKI AL + + + D++T+N ++ LC+ L
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
++A + R ++ P+ Y I+G CR +A L M +G P+
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 182/343 (53%), Gaps = 3/343 (0%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I L L K A+ L +M+Q+G PD++T+ +VN LCK GD + A +++ +M +
Sbjct: 189 LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK 248
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
N Y+ I C+ D AL+LF+ M N G+RPN +T++ L+ LC G DA
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ L +++ + K +++T + L+D++ K G +A L+ +M +++I +I Y+ LI
Sbjct: 309 RLLSDMI---ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
NGFC+ + A M+++ LP+V+TYNTL+N CK ++D+ + +S+ G+
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
+ ++Y T+I G D A+ M+ V P +N+++DG + G L+ A +
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 485
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDE 466
+ + + +++T+N +I + +G I+ E
Sbjct: 486 FEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVASALKE 528
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 188/375 (50%), Gaps = 8/375 (2%)
Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
KM++ G PD++T N L+N C + A ++ +M EM P+ T+ I G N
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
+ +A+ L M G +P+ VT+ +V+ LCK+G A+ L ++ A K ++V+
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA---AKIEANVV 254
Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
+ ++DS K + AL L+ +M K ++ +++ Y+ LI+ C G S A M
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
++R P+++T++ L++ K+GKL +A Y + K + P+ +Y ++I G C+ +
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
+A++ L M+ K +P +N +I+G+ + + + M G+ N T+ L
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 443 ILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 502
I + C+ + ++ +M+ G+ P+I+TY L+ G C G + +A VF +
Sbjct: 435 IHGFFQARDCDNAQM-----VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 503 QTLGLAIDHIPFRIL 517
Q + D + I+
Sbjct: 490 QRSTMEPDIYTYNIM 504
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 202/422 (47%), Gaps = 11/422 (2%)
Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
DYR V+R ++ A+ L M Q P ++ + L++ + K+ +
Sbjct: 45 DYRE---VLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFG 101
Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
+M + S N TYN I +CR + L AL L M G P+ VT N L++ C
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
+ DAV + +++ + D +T T L+ F + +A+AL + M Q+ Q D+
Sbjct: 162 NRISDAVALVDQMV---EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL 218
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
V Y ++NG C GD A +M +V+ Y+T+++ LCK D+A + +
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 278
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
+ GV P+ I+Y ++I LC +G A L M+E+ + P ++ +ID + + G
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDI 476
L A + + M+ + N+FT+++LI C L + A Q+ + M+R+ P++
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLI-----NGFCMLDRLGEAKQMLELMIRKDCLPNV 393
Query: 477 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
+TY LI G C + + E+F ++ GL + + + L + + ++ D A+ + ++
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 537 WL 538
+
Sbjct: 454 MV 455
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 183/376 (48%), Gaps = 8/376 (2%)
Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
KM G ++ T+N L+N C+ L A ++ +M ++ P+ T N+ + G+C
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
N + A+ L M G +P+ VT L+H L +AV + ++ D+
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG---CQPDL 218
Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
+T +++ K GD AL L N M I+ ++V Y+ +I+ C A F +
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 278
Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
M +G P+VITY++L++CLC G+ +AS + + + P+ +++ +I G
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
+VKA + M+++S+ P ++ +I+G+ L A + +LM+ NV T+N
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398
Query: 442 LILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 501
LI C + ++L+ EM +RG+ + +TYT LI G + A+ VF +
Sbjct: 399 LI-----NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 502 IQTLGLAIDHIPFRIL 517
+ ++G+ + + + IL
Sbjct: 454 MVSVGVHPNILTYNIL 469
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 139/267 (52%), Gaps = 3/267 (1%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E + + VI LC AL L +M KG P+V+T++ L++ LC G A
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
++ +M E + +PN T++A I + + +L KA L+ M I PN T++ L++
Sbjct: 309 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
C LG+A + L ++ D +V+T L++ + K + + L+ +M Q+ +
Sbjct: 369 CMLDRLGEAKQMLELMIRKD---CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
+ V Y LI+GF D +A F QM+ G P+++TYN LL+ LCK GKL +A
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 485
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHG 380
+ L ++ + PD +Y +I+G+C G
Sbjct: 486 FEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 155/339 (45%), Gaps = 43/339 (12%)
Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
ELD A+ LF MA + P+ + + L+ A+ K + F
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISF----------------- 100
Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
G+K + L + ++++ YN+LIN FC +S A A +M
Sbjct: 101 ------------GEKMEILGISHNLY---------TYNILINCFCRCSRLSLALALLGKM 139
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
+K G+ PD++T N+LLN C ++ +A + + G PD +++ T+I GL +H
Sbjct: 140 MKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKA 199
Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
+A + M+++ P+ + +++G + GD A ++ + M + + +NV ++ +
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 443 ILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 502
I + C H AL L+ EM +G+ P++ITY+ LI C G +A + + +
Sbjct: 260 I-----DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Query: 503 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 541
+ + + F L + + + KA ++++ + R+
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 38/210 (18%)
Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
++ +++ + + ++I C+ ++G A + MI+K +P+V+T+N L+N CK +
Sbjct: 350 IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
+K + REMS+ N TY I G+ + + D A +F M + G+ PN +T+NIL
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 469
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ LCK G L +A+ ++ + +
Sbjct: 470 LDGLCKNGKLA--------------------------------------KAMVVFEYLQR 491
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
++ DI YN++I G C G YF
Sbjct: 492 STMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 205/425 (48%), Gaps = 19/425 (4%)
Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
PV T T +I LCL G++ A L KM+ KG DV+T+ +VN +CK+GD
Sbjct: 224 PVVITFNT-------LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
+ A +++ +M E P+ Y+A I C+ A +LFS M GI PN T+N
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
++ C G DA + L +++ + + DV+T L+ + K G F+A L ++M
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMI---EREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
+ I D V YN +I GFC + A F M PDV+T+NT+++ C+ ++D
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVD 449
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
E +S+ G+ + +Y T+I G C ++ A++ M+ V P+ N+++
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEML 468
G+ L A + +++ + + +N +I +G+ + A L+ +
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK-----VDEAWDLFCSLP 564
Query: 469 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 528
G+ PD+ TY +I G C + + +A +F K++ G D+ + L + + E D
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Query: 529 KARDI 533
K+ ++
Sbjct: 625 KSIEL 629
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 180/389 (46%), Gaps = 36/389 (9%)
Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
N ++ ++ + A + R+M R N ++N I +C ++L +L F +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
G +P+ VT N L+H LC + + +A+ G Y
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFG-----------------------YMVETG 206
Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
+A+AL++ M + + ++ +N LING CL G + A A +M+ +G DV+TY T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
++N +CK G A + + +T + PD + Y II LC G A+ MLEK
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGH 456
+ P +N +IDG+ G S+A + M+ ++ +V TFNALI AS G
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI-----SASVKEGK 381
Query: 457 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 516
+ A +L DEML R I PD +TY +I G C +A+ +F L + D + F
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNT 437
Query: 517 LKKRYRRMKESDKA----RDIHQKWLLRN 541
+ Y R K D+ R+I ++ L+ N
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 202/426 (47%), Gaps = 29/426 (6%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC----------------KIG 167
+I+ C K+ +L K+ + G PDV+T N L++ LC + G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
LE A + +M E+ +P T+N I G C + +A L + M G+ + VT+
Sbjct: 207 FLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
+V+ +CK G A+ L ++ ++ DV+ + ++D K+G A L+++M
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKM---EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
+K I ++ YN +I+GFC G S A M++R PDV+T+N L++ K+GKL
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
EA + + PD ++Y ++I G C H A+ M + P+ +N I
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH----MFDLMASPDVVTFNTI 438
Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEM 467
ID Y R + + + G+ +N T+N LI C + +++ A L+ EM
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI-----HGFCEVDNLNAAQDLFQEM 493
Query: 468 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 527
+ G+ PD IT L+ G C ++EA E+F IQ + +D + + I+ + +
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 528 DKARDI 533
D+A D+
Sbjct: 554 DEAWDL 559
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 185/384 (48%), Gaps = 17/384 (4%)
Query: 95 KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
K L+ L M +T ++ D + A+I LC G A +L +M++KG P+V
Sbjct: 278 KSALNLLSKMEET-----HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
T+N +++ C G A ++R+M E +P+ T+NA I+ + +L +A L M
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
+ I P+ VT+N +++ CK DA D A+ DV+T ++D Y +
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-------DLMASPDVVTFNTIIDVYCRA 445
Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
+ + L ++ ++ + + YN LI+GFC ++++A F +M+ G PD IT
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
N LL C+ KL+EA + V+ + + D ++Y II G+C + +A + S+
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNL 454
V P+ +NV+I G+ +S+A + M G + T+N LI RG
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI----RGC-LKA 620
Query: 455 GHIHLALQLYDEMLRRGITPDIIT 478
G I +++L EM G + D T
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFT 644
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 189/398 (47%), Gaps = 29/398 (7%)
Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
A+ L RKM + ++ + N L+ C L + +++++ P+ T+N +
Sbjct: 124 VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183
Query: 196 TGYCRVNELDKALHLFSTMANNG---------------IRPNRVTHNILVHALCKKGLLG 240
G C + + +AL LF M G + P +T N L++ LC +G +
Sbjct: 184 HGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL 243
Query: 241 DAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
+A + +++ GK DV+T +++ K GD AL L + M + +I+ D+V Y
Sbjct: 244 EAAALVNKMV----GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
+ +I+ C +G S A F +ML++G P+V TYN +++ C G+ +A + +
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
+ PD +++ +I G + +A + ML + + P+ +N +I G+ + +
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITY 479
A + DLM S +V TFN +I R + G +QL E+ RRG+ + TY
Sbjct: 420 AKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEG-----MQLLREISRRGLVANTTTY 470
Query: 480 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 517
LI G C N+ A+++F ++ + G+ D I IL
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 114/222 (51%), Gaps = 3/222 (1%)
Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
PDV+T N +++ C+ +++ ++RE+S N TYN I G+C V+ L+ A L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
F M ++G+ P+ +T NIL++ C+ L +A++ L EV+ K D + I++
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALE-LFEVI--QMSKIDLDTVAYNIIIHG 546
Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
K +A L+ + ++ D+ YNV+I+GFC IS A F +M G PD
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
TYNTL+ K G++D++ + G + D + K +
Sbjct: 607 NSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 207/423 (48%), Gaps = 12/423 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+++ L +IG A ++ ++M +KG P+V+ +N L++ + G L KA + M
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
S +TYN I GYC+ + D A L M + G N+ + ++ LC + A+
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+F+GE+L + + T L+ K+G +AL LW K D N L+
Sbjct: 469 RFVGEMLLRNMSPGGGLL---TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 525
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+G C G + AF ++L RG + D ++YNTL++ C + KLDEA F + K G+
Sbjct: 526 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 585
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD +Y +I GL + +A +F ++P+ + ++V+IDG +
Sbjct: 586 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 645
Query: 424 RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 483
D M+S V N +N LI A C G + +AL+L ++M +GI+P+ TYT LI
Sbjct: 646 FDEMMSKNVQPNTVVYNHLI-----RAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700
Query: 484 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLL 539
KG ++EA+ +F +++ GL + + L Y ++ + K R++H K +
Sbjct: 701 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 760
Query: 540 RNK 542
NK
Sbjct: 761 PNK 763
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 159/354 (44%), Gaps = 11/354 (3%)
Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
++ KG PDV +N CK G +E+A + +M E +PN T+N I G
Sbjct: 264 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 323
Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
D+A M G+ P +T++ILV L + +GDA L E+ +VI
Sbjct: 324 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG---FPPNVIV 380
Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
L+DS+ + G +A+ + + M K + YN LI G+C NG +A +ML
Sbjct: 381 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 440
Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
GF + ++ +++ LC D A F G + ++P T+I GLC HG
Sbjct: 441 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 500
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
KA E L K V + N ++ G G L AF I+ +L G + ++N LI
Sbjct: 501 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 560
Query: 444 LAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 497
C + A DEM++RG+ PD TY+ LI C NM + EE
Sbjct: 561 -----SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI---CGLFNMNKVEE 606
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 173/388 (44%), Gaps = 54/388 (13%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I LC GK AL L + + KG V D T N L++ LC+ G L++A + +E+
Sbjct: 488 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 547
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ +YN I+G C +LD+A M G++P+ T++IL+ L + +A
Sbjct: 548 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 607
Query: 243 VKFLGEVLADDDGKATS---DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
++F DD K DV T ++++D K + +++M KN+Q + V Y
Sbjct: 608 IQFW------DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 661
Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
N LI +C +G +S A M +G P+ TY +L+ + +++EA + +
Sbjct: 662 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 721
Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
G+ P+ Y +I G G +VK L M K+V P + V+I GY R G+++
Sbjct: 722 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 781
Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITY 479
A +L +EM +GI PD ITY
Sbjct: 782 AS----------------------------------------RLLNEMREKGIVPDSITY 801
Query: 480 TELIKGHCARGNMKEA-----EEVFAKI 502
E I G+ +G + EA EE +A I
Sbjct: 802 KEFIYGYLKQGGVLEAFKGSDEENYAAI 829
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 148/310 (47%), Gaps = 3/310 (0%)
Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
D R A++ LC GK+ A ++++++ +G V D +++N L++ C L++A
Sbjct: 516 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 575
Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
+ EM + P+ TY+ I G +N++++A+ + NG+ P+ T+++++ CK
Sbjct: 576 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 635
Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
+ +F E+++ + + + L+ +Y ++G AL L DM K I +
Sbjct: 636 AERTEEGQEFFDEMMSKN---VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 692
Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
Y LI G + + A F +M G P+V Y L++ K G++ +
Sbjct: 693 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 752
Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
+ V P++I+Y +I G G++ +A L M EK +VP+ + I GY + G
Sbjct: 753 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 812
Query: 416 DLSNAFSIRD 425
+ AF D
Sbjct: 813 GVLEAFKGSD 822
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 143/304 (47%), Gaps = 9/304 (2%)
Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
AL +F +AN G+ P++ T NIL+ +L + + V + DV T
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKG----VSPDVYLFTT 278
Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
++++ K G +A+ L++ M + + ++V +N +I+G + G AF + +M++RG
Sbjct: 279 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 338
Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
P +ITY+ L+ L + ++ +A ++K G P+ I Y +I G + KA
Sbjct: 339 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 398
Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
E M+ K + +N +I GY + G NA + MLS G + N +F ++I
Sbjct: 399 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC-- 456
Query: 447 TRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 506
C+ AL+ EML R ++P T LI G C G +A E++ + G
Sbjct: 457 ---LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 507 LAID 510
+D
Sbjct: 514 FVVD 517
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
+ G +PDV T++ +++ CK E+ EM PN YN I YCR L
Sbjct: 616 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 675
Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
AL L M + GI PN T+ L+ + + +A E+ + +V T
Sbjct: 676 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG---LEPNVFHYT 732
Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
L+D Y K G + L +M KN+ + + Y V+I G+ +G+++ A +M ++
Sbjct: 733 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792
Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
G +PD ITY + KQG + EA F G D+ +Y II+G
Sbjct: 793 GIVPDSITYKEFIYGYLKQGGVLEA--FKG--------SDEENYAAIIEG 832
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 470 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 514
+G++PD+ +T I C G ++EA ++F+K++ G+A + + F
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTF 311
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 181/367 (49%), Gaps = 9/367 (2%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
H V+ L G++ AL R ++++G +++ N ++ L + +E A ++ +
Sbjct: 220 HGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVL 278
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ P+PN T+ I G+C+ E+D+A LF M GI P+ + ++ L+ K G+LG
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
K + L DV+ + +D Y K+GD A ++ M + I ++V Y
Sbjct: 339 MGHKLFSQALHKG---VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
+LI G C +G I AF + Q+LKRG P ++TY++L++ CK G L Y + K
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
G PD + Y ++ GL G ++ A F + ML +S+ ++N +IDG+ R A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYT 480
+ LM +G+ +V TF ++ S G + AL L+ M + G+ PD + Y
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVM-----RVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 481 ELIKGHC 487
LI C
Sbjct: 571 TLIDAFC 577
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 186/406 (45%), Gaps = 8/406 (1%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
+E + ++I C G + + L MI+ G PDV+ + LV+ L K G + A
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+M N +N+ I G+CR+N D+AL +F M GI+P+ T ++
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
+G L +A+ + D + L+D++ K+ L L++ M + I
Sbjct: 542 IMEGRLEEALFLFFRMFK---MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKIS 598
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
DI NV+I+ I A +F +++ PD++TYNT++ C +LDEA
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ +L T P+ ++ +I LC + D+ A M EK P + ++D + +
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGIT 473
D+ +F + + M G+S ++ +++ +I C G + A ++ + + +
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIII-----DGLCKRGRVDEATNIFHQAIDAKLL 773
Query: 474 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 519
PD++ Y LI+G+C G + EA ++ + G+ D + R L +
Sbjct: 774 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSE 819
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 200/442 (45%), Gaps = 38/442 (8%)
Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
G + TA + ++M+ +G P+V+T+ L+ LC+ G + +A + ++ + P+ TY
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
++ I G+C+ L L+ M G P+ V + +LV L K+GL+ A++F ++L
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 252 DD------------DG--------------------KATSDVITSTILMDSYFKNGDKFQ 279
DG DV T T +M G +
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
AL L+ MF+ ++ D +AY LI+ FC + + F M + D+ N +++
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
L K ++++AS F+ L + + PD ++Y T+I G C + +A + P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHL 459
++I + D+ A + +M G N T+ L+ ++ I
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD-----IEG 724
Query: 460 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 519
+ +L++EM +GI+P I++Y+ +I G C RG + EA +F + L D + + IL +
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 520 RYRRMKESDKARDIHQKWLLRN 541
Y ++ +A +++ +LRN
Sbjct: 785 GYCKVGRLVEAALLYEH-MLRN 805
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 155/323 (47%), Gaps = 16/323 (4%)
Query: 199 CRVNELDKALHLFSTMANNGIR-PNRVTHNILVHALCKKGLLG-DAVKFLGEVLAD--DD 254
CR +DKAL +F G+ P + +L L+G D V + +
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRML------NSLIGSDRVDLIADHFDKLCRG 210
Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
G S V ++D+ F G+ +AL + ++ + IV+ N ++ G ++ I
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEV 269
Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
A +L G P+V+T+ TL+N CK+G++D A + V+ + G+ PD I+Y T+I
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
G G + + L K V + +++ ID Y + GDL+ A + ML G+S
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 435 NVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 494
NV T+ LI C G I+ A +Y ++L+RG+ P I+TY+ LI G C GN++
Sbjct: 390 NVVTYTILI-----KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 495 AEEVFAKIQTLGLAIDHIPFRIL 517
++ + +G D + + +L
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVL 467
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 55/104 (52%)
Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
L +M +KG P +++++ +++ LCK G +++A ++ + + + P+ Y I GYC
Sbjct: 728 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 787
Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
+V L +A L+ M NG++P+ + L K L+ V
Sbjct: 788 KVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGV 831
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 42/238 (17%)
Query: 337 LLNCLCKQGKLDEASHFY------GV-----------------------------LSKTG 361
L+ C C+ G +D+A + GV L + G
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 362 VAPDQIS-YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
+ P +S + ++ L G++ KA +F ++E+ N ++ G + A
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVA 270
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYT 480
+ L+L G + NV TF LI C G + A L+ M +RGI PD+I Y+
Sbjct: 271 SRLLSLVLDCGPAPNVVTFCTLI-----NGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 481 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 538
LI G+ G + ++F++ G+ +D + F Y + + A ++++ L
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 209/444 (47%), Gaps = 40/444 (9%)
Query: 88 NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
+ LD +L EN ++ M R E + + +++ LC K+ A L +M K
Sbjct: 151 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 210
Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
G PD +++ +++ +C++G +++ RE++E R P + YNA I G C+ ++ A
Sbjct: 211 GCCPDAVSYTTVISSMCEVGLVKEG----RELAE-RFEPVVSVYNALINGLCKEHDYKGA 265
Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
L M GI PN ++++ L++ LC G + A FL ++L ++ T + L
Sbjct: 266 FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG---CHPNIYTLSSL 322
Query: 268 MDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
+ F G F AL LWN M + +Q ++VAYN L+ GFC +G+I A + F M + G
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
P++ TY +L+N K+G LD A + + + +G P+ + Y +++ LC H +A
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALI-- 443
+ M +++ P +N I G G L A + R + N+ T+N L+
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 444 ------LAETRG----------------------ASCNLGHIHLALQLYDEMLRRGITPD 475
+ E G SCN G +ALQL +M+ G +PD
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562
Query: 476 IITYTELIKGHCARGNMKEAEEVF 499
IT +I +C +G + A ++
Sbjct: 563 EITMNMIILAYCKQGKAERAAQML 586
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 181/394 (45%), Gaps = 40/394 (10%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV-IREMSEMRP--SPNCA 189
K G +L L+ +QK +P VL N VN L E +H I+E+ ++ +C
Sbjct: 4 KEGCSLLLK---VQKPLIPFVLNTNLNVNHLLT----ESPNHAEIKELDVVKRLRQESCV 56
Query: 190 TYNAFITGYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
ALH F ++AN N + +T +++ L G + D+V++L +
Sbjct: 57 PL---------------ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQV-DSVQYLLQ 100
Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
+ + D+ S I Y + G +A+ ++ + + + YN +++
Sbjct: 101 QMKLQGFHCSEDLFISVI--SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG 158
Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
I + + M + GF P+V TYN LL LCK K+D A +S G PD +S
Sbjct: 159 ENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVS 218
Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
Y T+I +C G + + RE L + P ++N +I+G + D AF + M+
Sbjct: 219 YTTVISSMCEVGLVKEGRE-----LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMV 273
Query: 429 SFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 488
G+S NV +++ LI CN G I LA +ML+RG P+I T + L+KG
Sbjct: 274 EKGISPNVISYSTLI-----NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL 328
Query: 489 RGNMKEAEEVFAK-IQTLGLAIDHIPFRILKKRY 521
RG +A +++ + I+ GL + + + L + +
Sbjct: 329 RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 145/326 (44%), Gaps = 38/326 (11%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
++++ L G AL L +MI+ G P+V+ +N LV C G++ KA V M E
Sbjct: 321 SLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380
Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
+ SPN TY + I G+ + LD A+++++ M +G PN V + +V ALC+ +
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440
Query: 242 AVKFLGEVLADDD----------------------------------GKATSDVITSTIL 267
A + E+++ ++ + +++T L
Sbjct: 441 AESLI-EIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNEL 499
Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
+D K +A L ++F + ++ YN L++G C G A +M+ G
Sbjct: 500 LDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK 559
Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLS--KTGVAPDQISYKTIIQGLCIHGDIVKA 385
PD IT N ++ CKQGK + A+ ++S + PD ISY +I GLC
Sbjct: 560 SPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619
Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGY 411
L M+ +VP W+V+I+ +
Sbjct: 620 VILLERMISAGIVPSIATWSVLINCF 645
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 173/401 (43%), Gaps = 49/401 (12%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE- 181
A+I LC A L R+M++KG P+V++++ L+N LC G +E A + +M +
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 182 -----------------MRPS------------------PNCATYNAFITGYCRVNELDK 206
+R + PN YN + G+C + K
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
A+ +FS M G PN T+ L++ K+G L AV ++L +V+ T
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG---CCPNVVVYTN 427
Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
++++ ++ +A +L M ++N + +N I G C G + A F QM ++
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Query: 327 FLP-DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
P +++TYN LL+ L K +++EA + GV +Y T++ G C G A
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIA 547
Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG---VSSNVFTFNAL 442
+ + M+ P+ N+II Y + G A + DL +S G +V ++ +
Sbjct: 548 LQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDL-VSCGRRKWRPDVISYTNV 606
Query: 443 ILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 483
I R G I L + M+ GI P I T++ LI
Sbjct: 607 IWGLCRSNCREDGVI-----LLERMISAGIVPSIATWSVLI 642
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 3/198 (1%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVP-DVLTHNYLVNELCKIGDLEKADHVIREMSE 181
A I+ LC G++ A + R+M Q+ P +++T+N L++ L K +E+A + RE+
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 521
Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
+ +TYN + G C AL L M +G P+ +T N+++ A CK+G
Sbjct: 522 RGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAER 581
Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
A + L ++++ K DVI+ T ++ ++ + + L M I I ++V
Sbjct: 582 AAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSV 640
Query: 302 LINGFCLNGDISSAFAYF 319
LIN F L+ DI A F
Sbjct: 641 LINCFILD-DIVRAHDQF 657
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 199/426 (46%), Gaps = 10/426 (2%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
LE + +++ C GKI AL L +M KG P + T L++ L + G + A
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+ EM+E PN TYN I GYC ++ KA M GI P+ ++ L+H L
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
C G +A F+ + G + I T L+ + + G +AL++ +M Q+ +
Sbjct: 588 CLTGQASEAKVFVDGL---HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
D+V Y VLI+G + D F +M RG PD + Y ++++ K G EA
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ ++ G P++++Y +I GLC G + +A M S VP + +D +
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Query: 414 CG-DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGI 472
D+ A + + +L G+ +N T+N LI RG C G I A +L M+ G+
Sbjct: 765 GEVDMQKAVELHNAILK-GLLANTATYNMLI----RGF-CRQGRIEEASELITRMIGDGV 818
Query: 473 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 532
+PD ITYT +I C R ++K+A E++ + G+ D + + L E KA +
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 533 IHQKWL 538
+ + L
Sbjct: 879 LRNEML 884
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 201/397 (50%), Gaps = 12/397 (3%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I LC K+ A+ +++ + K PDV+T+ LV LCK+ + E ++ EM +
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL 326
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
R SP+ A ++ + G + ++++AL+L + + G+ PN +N L+ +LCK +A
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386
Query: 243 VKFLGEVLADDDGKA--TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
E+L D GK + +T +IL+D + + G AL+ +M ++ + YN
Sbjct: 387 -----ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
LING C GDIS+A + +M+ + P V+TY +L+ C +GK+++A Y ++
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
G+AP ++ T++ GL G I A + M E +V P +NV+I+GY GD+S A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYT 480
F M G+ + +++ LI C G A D + + + I YT
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLI-----HGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 481 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 517
L+ G C G ++EA V ++ G+ +D + + +L
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 209/423 (49%), Gaps = 12/423 (2%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A+I LC G K A L +M + G P+ +T++ L++ C+ G L+ A + EM +
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
+ YN+ I G+C+ ++ A + M N + P VT+ L+ C KG + A
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
++ E+ G A S + T T L+ F+ G A+ L+N+M + N++ + V YNV+
Sbjct: 492 LRLYHEMTGK--GIAPS-IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I G+C GD+S AF + +M ++G +PD +Y L++ LC G+ EA F L K
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
++I Y ++ G C G + +A M+++ V + + V+IDG + D F
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 482
+ M G+ + + ++I A+++ G A ++D M+ G P+ +TYT +
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSK-----TGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 483 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF----RILKKRYRRMKESDKARDIHQKWL 538
I G C G + EAE + +K+Q + + + + IL K M+++ + + K L
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783
Query: 539 LRN 541
L N
Sbjct: 784 LAN 786
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 194/407 (47%), Gaps = 8/407 (1%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
+ +L + R A++ L G A+ L M+ G PDV + ++ LC++ DL
Sbjct: 185 KVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLS 244
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
+A +I M N YN I G C+ ++ +A+ + +A ++P+ VT+ LV
Sbjct: 245 RAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV 304
Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
+ LCK ++ + E+L + + V + L++ K G +AL L +
Sbjct: 305 YGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV---SSLVEGLRKRGKIEEALNLVKRVVDF 361
Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
+ ++ YN LI+ C A F +M K G P+ +TY+ L++ C++GKLD A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
F G + TG+ Y ++I G C GDI A F+ M+ K + P + ++ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRR 470
Y G ++ A + M G++ +++TF L+ R G I A++L++EM
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA-----GLIRDAVKLFNEMAEW 536
Query: 471 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 517
+ P+ +TY +I+G+C G+M +A E ++ G+ D +R L
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 140/281 (49%), Gaps = 7/281 (2%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ ++ C GK+ AL + ++M+Q+G D++ + L++ K D + +++EM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ P+ Y + I + + +A ++ M N G PN VT+ +++ LCK G +
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 241 DAVKFLGEVLADDDGKATS--DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
+A EVL +S + +T +D K Q ++ K + +
Sbjct: 735 EA-----EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTAT 789
Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
YN+LI GFC G I A +M+ G PD ITY T++N LC++ + +A + ++
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
+ G+ PD+++Y T+I G C+ G++ KA E ML + ++P
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 123/237 (51%), Gaps = 10/237 (4%)
Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
LK M D G L+ D + ++I G A + MI +G VP+ +T+ ++
Sbjct: 670 LKEMHDRG-----LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN-ELDKALHLFSTMANNGI 219
N LCK G + +A+ + +M + PN TY F+ + ++ KA+ L + + G+
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GL 783
Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
N T+N+L+ C++G + +A + + ++ D + D IT T +++ + D +
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDG---VSPDCITYTTMINELCRRNDVKK 840
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
A+ LWN M +K I+ D VAYN LI+G C+ G++ A +ML++G +P+ T T
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 40/251 (15%)
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
A+ L+NDM I+ D+ Y +I C D+S A M G +++ YN L++
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
LCK+ K+ EA L+ + PD ++Y T++ GLC K +EF + +
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC------KVQEFEIGL------- 317
Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHL 459
+ D ML S + ++L+ + G I
Sbjct: 318 ----------------------EMMDEMLCLRFSPSEAAVSSLVEGLRK-----RGKIEE 350
Query: 460 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 519
AL L ++ G++P++ Y LI C EAE +F ++ +GL + + + IL
Sbjct: 351 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 520 RYRRMKESDKA 530
+ R + D A
Sbjct: 411 MFCRRGKLDTA 421
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%)
Query: 90 LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
LD++ K +D K + + L + + +IR C G+I A L +MI G
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
PD +T+ ++NELC+ D++KA + M+E P+ YN I G C E+ KA
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 210 LFSTMANNGIRPNRVT 225
L + M G+ PN T
Sbjct: 879 LRNEMLRQGLIPNNKT 894
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 199/440 (45%), Gaps = 34/440 (7%)
Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
+C G + A L +M +G VPD +T+N +++ K+G L+ EM +M P+
Sbjct: 272 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 331
Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
TYNA I +C+ +L L + M NG++PN V+++ LV A CK+G++ A+KF
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
++ + T T L+D+ K G+ A L N+M Q ++ ++V Y LI+G C
Sbjct: 392 DM---RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
+ A F +M G +P++ +YN L++ K +D A L G+ PD +
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
Y T I GLC I A+ + M E + I+ ++D Y + G+ + + D M
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 428 LSFGVSSNVFTF-------------------------------NALILAETRGASCNLGH 456
+ V TF NA I C
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 457 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 516
+ A L+++M+++G+ PD YT L+ G+ +GN+ EA + K+ +G+ +D + +
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 517 LKKRYRRMKESDKARDIHQK 536
L + KAR ++
Sbjct: 689 LVWGLSHCNQLQKARSFLEE 708
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 158/325 (48%), Gaps = 8/325 (2%)
Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
P ++A + + L++A+ FS M + P + N L+H K G D +F
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
+++ A V T I++D K GD A L+ +M + + D V YN +I+G
Sbjct: 250 FKDMIG---AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
F G + +F +M PDVITYN L+NC CK GKL FY + G+ P+
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
+SY T++ C G + +A +F + M +VP + + +ID + G+LS+AF + +
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 426 LMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 485
ML GV NV T+ ALI C+ + A +L+ +M G+ P++ +Y LI G
Sbjct: 427 EMLQVGVEWNVVTYTALI-----DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 486 HCARGNMKEAEEVFAKIQTLGLAID 510
NM A E+ +++ G+ D
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPD 506
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 181/405 (44%), Gaps = 8/405 (1%)
Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
G + A+ KM + P + N L++ K+G + ++M P TY
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
N I C+ +++ A LF M G+ P+ VT+N ++ K G L D V F E+
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM-- 323
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
D DVIT L++ + K G L + +M ++ ++V+Y+ L++ FC G
Sbjct: 324 -KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
+ A ++ M + G +P+ TY +L++ CK G L +A + + GV + ++Y
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
+I GLC + +A E M V+P +N +I G+ + ++ A + + + G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 432 VSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 491
+ ++ + I C+L I A + +EM GI + + YT L+ + GN
Sbjct: 503 IKPDLLLYGTFIW-----GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 492 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
E + +++ L + + + F +L + K KA D +
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 185/389 (47%), Gaps = 44/389 (11%)
Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
R L + + ++I C G + A L +M+Q G +V+T+ L++ LC ++
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
+A+ + +M PN A+YNA I G+ + +D+AL L + + GI+P+ + + +
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
LC + +A K + + + KA S + T+ LMD+YFK+G+ + L L ++M +
Sbjct: 515 WGLCSLEKI-EAAKVVMNEMKECGIKANSLIYTT--LMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDE 349
+I+ +V + VLI+G C N +S A YF ++ G + + +++ LCK +++
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
A+ + + + G+ PD+ +Y +++ G G++++
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE------------------------- 666
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLR 469
A ++RD M G+ ++ + +L+ + CN + A +EM+
Sbjct: 667 ----------ALALRDKMAEIGMKLDLLAYTSLVWGLSH---CN--QLQKARSFLEEMIG 711
Query: 470 RGITPDIITYTELIKGHCARGNMKEAEEV 498
GI PD + ++K H G + EA E+
Sbjct: 712 EGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 159/368 (43%), Gaps = 52/368 (14%)
Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST------- 265
+M NG + + ++ I+ H L + DA L E++ DV+ ST
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191
Query: 266 ---------ILMD--------SYFKNGDKFQALA-----------------------LWN 285
+L+D F +F+ +
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
DM + + YN++I+ C GD+ +A F +M RG +PD +TYN++++ K G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
+LD+ F+ + PD I+Y +I C G + EF M + P ++
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYD 465
++D + + G + A M G+ N +T+ +LI A + +G++ A +L +
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK-----IGNLSDAFRLGN 426
Query: 466 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 525
EML+ G+ +++TYT LI G C MKEAEE+F K+ T G+ + + L + + K
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 526 ESDKARDI 533
D+A ++
Sbjct: 487 NMDRALEL 494
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 108/270 (40%), Gaps = 33/270 (12%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
A+I + AL L ++ +G PD+L + + LC + +E A V+ EM E
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 536
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
N Y + Y + + LHL M I VT +L+ LCK L+ A
Sbjct: 537 GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596
Query: 243 VKFLGEVLADDDGKATSDVITSTI---------------------------------LMD 269
V + + D +A + + T+ I LMD
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
FK G+ +ALAL + M + ++ D++AY L+ G + A ++ +M+ G P
Sbjct: 657 GNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
D + ++L + G +DEA L K
Sbjct: 717 DEVLCISVLKKHYELGCIDEAVELQSYLMK 746
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 194/442 (43%), Gaps = 37/442 (8%)
Query: 114 LETDYR----RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
LE+D+R + I+ +G L L +M P V +N L++ LCK +
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
A+ + EM R P+ TYN I GYC+ +K+ + M + I P+ +T N L
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ L K G++ DA L E+ D D T +IL D Y N AL ++
Sbjct: 291 LKGLFKAGMVEDAENVLKEM---KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
++ + ++L+N C G I A + + +G +P+ + YNT+++ C++G L
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
A + K G+ PD ++Y +I+ C G++ A + + M K V P +N++I
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA-----------------ETRGAS- 451
GYGR + F I M G NV ++ LI E RG S
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 452 ------------CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 499
C+ G I A + EML++GI +++TY LI G G + EAE++
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Query: 500 AKIQTLGLAIDHIPFRILKKRY 521
+I GL D + L Y
Sbjct: 588 LEISRKGLKPDVFTYNSLISGY 609
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 185/390 (47%), Gaps = 16/390 (4%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
+I C G + A M ++G PD L +N L+ C++G++E A+ + +M
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
SP+ TYN I GY R E DK + M +NG PN V++ L++ LCK L +A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 243 VKFLGEVLADD--DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+++ D D + V +L+D G A +M +K I+ ++V YN
Sbjct: 514 -----QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN 568
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
LI+G + G +S A ++ ++G PDV TYN+L++ G + Y + ++
Sbjct: 569 TLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
G+ P +Y +I LC I M S+ P+ ++N ++ Y GD+ A
Sbjct: 629 GIKPTLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKA 684
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYT 480
F+++ M+ + + T+N+LIL + + +G + L DEM R + P+ TY
Sbjct: 685 FNLQKQMIEKSIGLDKTTYNSLILGQLK-----VGKLCEVRSLIDEMNAREMEPEADTYN 739
Query: 481 ELIKGHCARGNMKEAEEVFAKIQTLGLAID 510
++KGHC + A + ++Q G +D
Sbjct: 740 IIVKGHCEVKDYMSAYVWYREMQEKGFLLD 769
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 175/364 (48%), Gaps = 14/364 (3%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI-REMSEMRPSPNCATY 191
K AL + + G + T + L+N LCK G +EKA+ ++ REM++ PN Y
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGL-VPNEVIY 392
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
N I GYCR +L A M G++P+ + +N L+ C+ G + +A K EV
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK---EVNK 449
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
+ V T IL+ Y + + + + +M ++V+Y LIN C
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
+ A M RG P V YN L++ C +GK+++A F + K G+ + ++Y T
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
+I GL + G + +A + LL + K + P+ +N +I GYG G++ ++ + M G
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 432 VSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 491
+ + T++ LI + C I L +L+ EM + PD++ Y ++ + G+
Sbjct: 630 IKPTLKTYHLLI------SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGD 680
Query: 492 MKEA 495
M++A
Sbjct: 681 MEKA 684
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 164/387 (42%), Gaps = 43/387 (11%)
Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
+G P + L++ L K +V + E P+ Y I +++++ K
Sbjct: 138 EGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK 197
Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
L LF+ M ++ I P+ +N+L+ LCK + DA + E+LA + +IT
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR---RLLPSLITYNT 254
Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
L+D Y K G+ ++ + M +I+ ++ +N L+ G G + A +M G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
F+PD T++ L + K + A Y +GV + + ++ LC G I KA
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
E L + K +VP I+N +IDGY R GDL
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLV---------------------------- 406
Query: 447 TRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 506
GA + + M ++G+ PD + Y LI+ C G M+ AE+ K++ G
Sbjct: 407 --GARMKI----------EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 507 LAIDHIPFRILKKRYRRMKESDKARDI 533
++ + IL Y R E DK DI
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDI 481
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 154/337 (45%), Gaps = 8/337 (2%)
Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
+ +A LF + N GI P+ + +L+ L K + +L + D + + +
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNIL-ESDFRPSKFMYG 183
Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
I + K D + L L+N M I + YNVLI+G C ++ A F +ML
Sbjct: 184 KAI--QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
R LP +ITYNTL++ CK G +++ + + P I++ T+++GL G +
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
A L M + VP+ ++++ DGY A + + + GV N +T + L+
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 444 LAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 503
A C G I A ++ + +G+ P+ + Y +I G+C +G++ A ++
Sbjct: 362 -----NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAME 416
Query: 504 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 540
G+ DH+ + L +R+ + E + A K L+
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 34/300 (11%)
Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
++M GT+P+V+++ L+N LCK L +A V R+M + SP YN I G C
Sbjct: 483 KEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK 542
Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
+++ A M GI N VT+N L+ L G L +A L E+ DV
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEI---SRKGLKPDV 599
Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQT--------------------------- 294
T L+ Y G+ + +AL+ +M + I+
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEM 659
Query: 295 ----DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
D++ YN +++ + ++GD+ AF QM+++ D TYN+L+ K GKL E
Sbjct: 660 SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 719
Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
++ + P+ +Y I++G C D + A + M EK + + I N ++ G
Sbjct: 720 RSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG 779
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 7/258 (2%)
Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
R + +I C GKI A ++M++KG +++T+N L++ L G L +A+ ++ E
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
+S P+ TYN+ I+GY + + + L+ M +GI+P T+++L+ +LC K
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEG 648
Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
+ + GE+ D++ ++ Y +GD +A L M +K+I D
Sbjct: 649 IELTERLFGEM------SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTT 702
Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
YN LI G G + + +M R P+ TYN ++ C+ A +Y +
Sbjct: 703 YNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQ 762
Query: 359 KTGVAPDQISYKTIIQGL 376
+ G D ++ GL
Sbjct: 763 EKGFLLDVCIGNELVSGL 780
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
+L+ D + V+ + G + A L+++MI+K D T+N L+ K+G L +
Sbjct: 660 SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 719
Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
+I EM+ P TYN + G+C V + A + M G + N LV
Sbjct: 720 RSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG 779
Query: 233 LCKKGLLGDAV--------KFLGEVLADDDGKATSDV 261
L ++ +A + LG+V D+D AT +
Sbjct: 780 LKEEWRSKEAEIVISEMNGRMLGDVTVDEDLSATEKL 816
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 203/415 (48%), Gaps = 10/415 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I C GK+ A+ ++M G D++ + L+ C G+L++ + E+ E
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
SP TYN I G+C++ +L +A +F M G+RPN T+ L+ LC G +A+
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ L ++ D+ + +T I+++ K+G A+ + M ++ + D + YN+L+
Sbjct: 338 QLLNLMIEKDE---EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
G C GD+ A MLK PDVI+YN L++ LCK+ +L +A Y +L +
Sbjct: 395 GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
A D+++ ++ GD+ KA E + + +V + +IDG+ + G L+ A
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAK 514
Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 481
+ M + +VF +N L+ + C G + A +L++EM R PD++++
Sbjct: 515 GLLCKMRVSELQPSVFDYNCLL-----SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 482 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
+I G G++K AE + + GL+ D + L R+ ++ D+A K
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDK 624
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 194/407 (47%), Gaps = 47/407 (11%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K G A + M+++G +V HN L+ LC+ + KA ++REM P+ +YN
Sbjct: 122 KTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYN 181
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
I G+C EL+KAL L + M +G + VT IL+ A CK G + +A+ FL E+
Sbjct: 182 TVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM--- 238
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
KF L + D+V Y LI GFC G++
Sbjct: 239 ------------------------KFMGL-----------EADLVVYTSLIRGFCDCGEL 263
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A F ++L+RG P ITYNTL+ CK G+L EAS + + + GV P+ +Y +
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I GLC G +A + L M+EK P +N+II+ + G +++A I +LM
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383
Query: 433 SSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRG--ITPDIITYTELIKGHCARG 490
+ T+N L+ G C G + A +L ML+ PD+I+Y LI G C
Sbjct: 384 RPDNITYNILL-----GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 491 NMKEAEEVF-AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
+ +A +++ ++ LG A D + IL + + +KA ++ ++
Sbjct: 439 RLHQALDIYDLLVEKLG-AGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 158/313 (50%), Gaps = 5/313 (1%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ +I LC GK AL L MI+K P+ +T+N ++N+LCK G + A ++ M
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG--IRPNRVTHNILVHALCKKGL 238
+ R P+ TYN + G C +LD+A L M + P+ +++N L+H LCK+
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
L A+ ++L + G D +T+ IL++S K GD +A+ LW + I +
Sbjct: 440 LHQALDIY-DLLVEKLG--AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDT 496
Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
Y +I+GFC G ++ A C+M P V YN LL+ LCK+G LD+A + +
Sbjct: 497 YTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556
Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
+ PD +S+ +I G GDI A L+ M + P+ ++ +I+ + + G L
Sbjct: 557 RDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLD 616
Query: 419 NAFSIRDLMLSFG 431
A S D M+ G
Sbjct: 617 EAISFFDKMVDSG 629
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 210/455 (46%), Gaps = 50/455 (10%)
Query: 94 LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
+ E + LK M+ G LE D + ++IR C G++ L +++++G P
Sbjct: 228 MDEAMGFLKEMKFMG-----LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
+T+N L+ CK+G L++A + M E PN TY I G C V + +AL L +
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
M PN VT+NI+++ LCK GL+ DAV+ + E++ + D IT IL+
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV-ELMKKR--RTRPDNITYNILLGGLCA 399
Query: 274 NGDKFQALALWNDMFQKNIQTD--IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
GD +A L M + + TD +++YN LI+G C + A + ++++ D
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459
Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
+T N LLN K G +++A + +S + + + +Y +I G C G + A+ L
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 392 M----LEKSVV-------------------------------PEPHIWNVIIDGYGRCGD 416
M L+ SV P+ +N++IDG + GD
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDI 476
+ +A S+ M G+S ++FT++ LI LG++ A+ +D+M+ G PD
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLI-----NRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Query: 477 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 511
++K ++G + E+ K+ + +D
Sbjct: 635 HICDSVLKYCISQGETDKLTELVKKLVDKDIVLDK 669
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 3/263 (1%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
+ D + A+I LC ++ AL + +++K D +T N L+N K GD+ KA
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
+ +++S+ + N TY A I G+C+ L+ A L M + ++P+ +N L+ +LC
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
K+G L A + E+ D++ DV++ I++D K GD A +L M + +
Sbjct: 541 KEGSLDQAWRLFEEMQRDNN---FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
D+ Y+ LIN F G + A ++F +M+ GF PD +++L QG+ D+ +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV 657
Query: 355 GVLSKTGVAPDQISYKTIIQGLC 377
L + D+ T++ +C
Sbjct: 658 KKLVDKDIVLDKELTCTVMDYMC 680
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
A + + M + + + V+ + L+ + AF MLKRGF +V +N LL
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
LC+ + +A + + + PD SY T+I+G C ++ KA E M
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHL 459
W ++ID + + G + A M G+ +++ + +LI RG C+ G +
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI----RGF-CDCGELDR 265
Query: 460 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 499
L+DE+L RG +P ITY LI+G C G +KEA E+F
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 92/226 (40%), Gaps = 40/226 (17%)
Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
AF+++ +ML+ + ++ + LL C + K A ++ K G A + ++ +++
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
GLC + + KA L M S++P+ +N +I G+
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGF----------------------- 187
Query: 435 NVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 494
C + AL+L +EM G + ++T+ LI C G M E
Sbjct: 188 -----------------CEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230
Query: 495 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 540
A +++ +GL D + + L + + E D+ + + + L R
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 52/126 (41%)
Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
G I +A L M + G PD+ T++ L+N K+G L++A +M + P+
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636
Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
++ + E DK L + + I ++ ++ +C D K L V
Sbjct: 637 CDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVT 696
Query: 251 ADDDGK 256
D + +
Sbjct: 697 DDKEER 702
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 210/455 (46%), Gaps = 61/455 (13%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
V++ C +I +AL L R M + G VP+ + + L++ L K + +A ++ EM M
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
P+ T+N I G C+ + +++A + + M G P+ +T+ L++ LCK G + DA
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV-DA 340
Query: 243 VK--------------------FLGEVLADDDGKATSDVITS----------TILMDSYF 272
K F+ DD SD++TS L+ Y+
Sbjct: 341 AKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
K G AL + +DM K + ++ +Y +L++GFC G I A+ +M G P+ +
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
+N L++ CK+ ++ EA + + + G PD ++ ++I GLC +I A L M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGA-- 450
+ + VV +N +I+ + R G++ A + + M+ G + T+N+LI R
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 451 --------------------SCNL--------GHIHLALQLYDEMLRRGITPDIITYTEL 482
SCN+ G + A++ EM+ RG TPDI+T+ L
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 483 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 517
I G C G +++ +F K+Q G+ D + F L
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 202/440 (45%), Gaps = 40/440 (9%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA----------- 172
VI LC +I A + +M+ +G PD +T+ YL+N LCKIG ++ A
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 173 -----------------DHVIREMSEMRPS----PNCATYNAFITGYCRVNELDKALHLF 211
D +S+M S P+ TYN+ I GY + + AL +
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
M N G +PN ++ ILV CK G + +A L E+ AD + + L+ ++
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG---LKPNTVGFNCLISAF 469
Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
K +A+ ++ +M +K + D+ +N LI+G C +I A M+ G + +
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
+TYNTL+N ++G++ EA + G D+I+Y ++I+GLC G++ KAR
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGAS 451
ML P N++I+G R G + A + M+ G + ++ TFN+LI
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI-----NGL 644
Query: 452 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 511
C G I L ++ ++ GI PD +T+ L+ C G + +A + + G +H
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
Query: 512 IPFRILKKRYRRMKESDKAR 531
+ IL + + D+ R
Sbjct: 705 RTWSILLQSIIPQETLDRRR 724
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 192/425 (45%), Gaps = 13/425 (3%)
Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
E ++ + V+ L G A + M+ + P + T ++ C + +++ A
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
++R+M++ PN Y I + N +++AL L M G P+ T N ++ LC
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
K + +A K + +L G A D IT LM+ K G A D+F + +
Sbjct: 299 KFDRINEAAKMVNRMLI--RGFAPDD-ITYGYLMNGLCKIGRVDAA----KDLFYRIPKP 351
Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDEASHF 353
+IV +N LI+GF +G + A A M+ G +PDV TYN+L+ K+G + A
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
+ G P+ SY ++ G C G I +A L M + P +N +I + +
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGIT 473
+ A I M G +V+TFN+LI C + I AL L +M+ G+
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLI-----SGLCEVDEIKHALWLLRDMISEGVV 526
Query: 474 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 533
+ +TY LI RG +KEA ++ ++ G +D I + L K R E DKAR +
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 534 HQKWL 538
+K L
Sbjct: 587 FEKML 591
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 159/311 (51%), Gaps = 8/311 (2%)
Query: 98 LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
L+ L MR+ G + + + ++ C GKI A + +M G P+ + N
Sbjct: 409 LEVLHDMRNKG-----CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
L++ CK + +A + REM P+ T+N+ I+G C V+E+ AL L M +
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
G+ N VT+N L++A ++G + +A K + E++ + D IT L+ + G+
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG---SPLDEITYNSLIKGLCRAGEV 580
Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
+A +L+ M + ++ N+LING C +G + A + +M+ RG PD++T+N+L
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
+N LC+ G++++ + L G+ PD +++ T++ LC G + A L +E
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Query: 398 VPEPHIWNVII 408
VP W++++
Sbjct: 701 VPNHRTWSILL 711
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 175/385 (45%), Gaps = 16/385 (4%)
Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
+ L+ +L G+ + D ++ +M + + + + + Y + + L M
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 215 AN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD-DGKATSDVITSTILMDSYF 272
N P ++N+++ L G+ K V D K + T ++M ++
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVS----GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
+ AL+L DM + + V Y LI+ ++ A +M G +PD
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
T+N ++ LCK +++EA+ + G APD I+Y ++ GLC G + A++ +
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGAS 451
+ PE I+N +I G+ G L +A ++ D++ S+G+ +V T+N+LI +
Sbjct: 349 PK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE-- 402
Query: 452 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 511
G + LAL++ +M +G P++ +YT L+ G C G + EA V ++ GL +
Sbjct: 403 ---GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459
Query: 512 IPFRILKKRYRRMKESDKARDIHQK 536
+ F L + + +A +I ++
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFRE 484
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
++I LC G+I L + RK+ +G PD +T N L++ LCK G + A ++ E E
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698
Query: 183 RPSPNCATYNAFITGYCRVNELDK 206
PN T++ + LD+
Sbjct: 699 GFVPNHRTWSILLQSIIPQETLDR 722
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 196/386 (50%), Gaps = 13/386 (3%)
Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
++ ++MI++ P+V T N ++N LCK G + KA V+ +M SPN +YN I GY
Sbjct: 209 YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268
Query: 199 CRV---NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
C++ ++ KA + M N + PN T NIL+ K L ++K E+L D
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD-- 326
Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
+VI+ L++ G +A+++ + M +Q +++ YN LINGFC N + A
Sbjct: 327 -VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
F + +G +P YN L++ CK GK+D+ + + G+ PD +Y +I G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
LC +G+I A++ L L +P+ ++++++GY R G+ A + M G+
Sbjct: 446 LCRNGNIEAAKK-LFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 436 VFTFNALILAETRGASCNLGHIHLALQLYDEMLR-RGITPDIITYTELIKGHCARGNMKE 494
T+N ++ C G++ A + +M + R + ++ +Y L++G+ +G +++
Sbjct: 505 HLTYNIVM-----KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLED 559
Query: 495 AEEVFAKIQTLGLAIDHIPFRILKKR 520
A + ++ GL + I + I+K+
Sbjct: 560 ANMLLNEMLEKGLVPNRITYEIVKEE 585
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 194/365 (53%), Gaps = 14/365 (3%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI---GDLEKADHVIREMS 180
VI LC GK+ A + M G P+V+++N L++ CK+ G + KAD V++EM
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
E SPN T+N I G+ + + L ++ +F M + ++PN +++N L++ LC G +
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+A+ ++++ ++IT L++ + KN +AL ++ + + YN
Sbjct: 349 EAISMRDKMVS---AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
+LI+ +C G I FA +M + G +PDV TYN L+ LC+ G ++ A + L+
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
G+ PD +++ +++G C G+ KA L M + + P +N+++ GY + G+L A
Sbjct: 466 GL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 421 FSIRDLM-LSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITY 479
++R M + NV ++N L+ ++ G + A L +EML +G+ P+ ITY
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQK-----GKLEDANMLLNEMLEKGLVPNRITY 579
Query: 480 TELIK 484
E++K
Sbjct: 580 -EIVK 583
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 176/349 (50%), Gaps = 41/349 (11%)
Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
++V +EM + PN T+N I C+ +++KA + M G PN V++N L+
Sbjct: 208 EYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDG 267
Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
CK G NG ++A A+ +M + ++
Sbjct: 268 YCKLG-----------------------------------GNGKMYKADAVLKEMVENDV 292
Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
++ +N+LI+GF + ++ + F +ML + P+VI+YN+L+N LC GK+ EA
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
+ GV P+ I+Y +I G C + + +A + S+ + VP ++N++ID Y
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412
Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGI 472
+ G + + F++++ M G+ +V T+N LI C G+I A +L+D++ +G+
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLI-----AGLCRNGNIEAAKKLFDQLTSKGL 467
Query: 473 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 521
PD++T+ L++G+C +G ++A + ++ +GL H+ + I+ K Y
Sbjct: 468 -PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 154/300 (51%), Gaps = 27/300 (9%)
Query: 114 LETDYRRHV----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
L+ D + +V ++I LC GGKI A+ +R KM+ G P+++T+N L+N CK L
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
++A + + P YN I YC++ ++D L M GI P+ T+N L
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
+ LC+ G + A K ++ + K D++T ILM+ Y + G+ +A L +M +
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTS----KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLD 348
++ + YN+++ G+C G++ +A QM K R +V +YN LL ++GKL+
Sbjct: 499 MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP--EPHIWNV 406
+A+ + + G+ P++I+Y +IVK M+++ VP E H++NV
Sbjct: 559 DANMLLNEMLEKGLVPNRITY-----------EIVKEE-----MVDQGFVPDIEGHLFNV 602
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 34/297 (11%)
Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
LM + K ++ +M ++ IQ ++ +NV+IN C G ++ A M G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 327 FLPDVITYNTLLNCLCK---QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
P+V++YNTL++ CK GK+ +A + + V+P+ ++ +I G ++
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
+ + ML++ V P +N +I+G G +S A S+RD M+S GV N+ T+NALI
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 444 ---------------LAETRG---------------ASCNLGHIHLALQLYDEMLRRGIT 473
+G A C LG I L +EM R GI
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 474 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 530
PD+ TY LI G C GN++ A+++F ++ + GL D + F IL + Y R ES KA
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKA 489
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 119/239 (49%), Gaps = 24/239 (10%)
Query: 93 ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
+LKE LD +++ G V T R + +I C GKI L+ +M ++G VPD
Sbjct: 381 MLKEALDMFGSVKGQGAVPTT-----RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435
Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
V T+N L+ LC+ G++E A + +++ + P+ T++ + GYCR E KA L
Sbjct: 436 VGTYNCLIAGLCRNGNIEAAKKLFDQLTS-KGLPDLVTFHILMEGYCRKGESRKAAMLLK 494
Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
M+ G++P +T+NI++ CK+G L A ++ + + + +V + +L+ Y
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM--EKERRLRMNVASYNVLLQGYS 552
Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
+ G A L N+M +K + + + Y ++ +M+ +GF+PD+
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEIVKE----------------EMVDQGFVPDI 595
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 191/406 (47%), Gaps = 34/406 (8%)
Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
C G +L L M++KG PDV+ L+ + ++ KA V+ E+ E P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
YNA I G+C++N +D A + M + P+ VT+NI++ +LC +G L A+K L +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
+L+D+ VIT TIL+++ G +AL L ++M + ++ D+ YN +I G C
Sbjct: 219 LLSDN---CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
G + AF + +G PDVI+YN LL L QGK +E + P+ ++
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
Y +I LC G I +A L M EK + P+ + ++ +I + R G L A + M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 429 SFGVSSNVFTFNALILAETRGASCN--------LGHIHL--------------------- 459
S G ++ +N ++ + + LG +
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 460 -ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 504
AL + EM+ GI PD ITY +I C G + EA E+ +++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 207/424 (48%), Gaps = 17/424 (4%)
Query: 98 LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
LDR+++ +D P D + +I LC GK+ AL + +++ P V+T+
Sbjct: 181 LDRMRS-KDFSP-------DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYT 232
Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
L+ G +++A ++ EM P+ TYN I G C+ +D+A + +
Sbjct: 233 ILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK 292
Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
G P+ +++NIL+ AL +G + K + ++ ++ K +V+T +IL+ + ++G
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE---KCDPNVVTYSILITTLCRDGKI 349
Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
+A+ L M +K + D +Y+ LI FC G + A + M+ G LPD++ YNT+
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 409
Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
L LCK GK D+A +G L + G +P+ SY T+ L GD ++A +L M+ +
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHI 457
P+ +N +I R G + AF + M S +V T+N ++L C I
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL-----GFCKAHRI 524
Query: 458 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 517
A+ + + M+ G P+ TYT LI+G G EA E+ + + AI F+ L
Sbjct: 525 EDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID-AISEYSFKRL 583
Query: 518 KKRY 521
+ +
Sbjct: 584 HRTF 587
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 143/338 (42%), Gaps = 9/338 (2%)
Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
CR ++LHL TM G P+ + L+ + AV+ + E+L +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EIL---EKFGQ 155
Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
DV L++ + K A + + M K+ D V YN++I C G + A
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
Q+L P VITY L+ +G +DEA + G+ PD +Y TII+G+C
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
G + +A E + ++ K P+ +N+++ G + M S NV T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 439 FNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 498
++ LI C G I A+ L M +G+TPD +Y LI C G + A E
Sbjct: 336 YSILITT-----LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 499 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 536
+ + G D + + + + ++D+A +I K
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 177/359 (49%), Gaps = 8/359 (2%)
Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
A L +M+ +P ++ L+ + E + ++M S + ++ I
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
+CR + L AL + M G P+ VT L+H C +GDA + +L G
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV--ILMVKSGY 172
Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
+ V+ +T L+D KNG+ AL L N+M +K + D+V YN L+ G C +G S A
Sbjct: 173 EPNVVVYNT-LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
M+KR PDV+T+ L++ KQG LDEA Y + ++ V P+ ++Y +II GL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
C+HG + A++ M K P +N +I G+ + + + M G ++++
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 437 FTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 495
FT+N LI C +G + +AL ++ M+ R +TPDIIT+ L+ G C G ++ A
Sbjct: 352 FTYNTLI-----HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 187/391 (47%), Gaps = 8/391 (2%)
Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
D +I C ++ AL + KM++ G P ++T L++ C + + A ++
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
M + PN YN I G C+ EL+ AL L + M G+ + VT+N L+ LC
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
G DA + L +++ DV+T T L+D + K G+ +A L+ +M Q ++ +
Sbjct: 225 GRWSDAARMLRDMMKRS---INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
V YN +ING C++G + A F M +G P+V+TYNTL++ CK +DE +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
+S G D +Y T+I G C G + A + M+ + V P+ +++ G G+
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDI 476
+ +A D M + +N +I C + A +L+ + G+ PD
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMI-----HGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 477 ITYTELIKGHCARGNMKEAEEVFAKIQTLGL 507
TYT +I G C G +EA+E+ +++ G+
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 149/301 (49%), Gaps = 8/301 (2%)
Query: 98 LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
L+ L M G L D + ++ LC G+ A + R M+++ PDV+T
Sbjct: 196 LELLNEMEKKG-----LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
L++ K G+L++A + +EM + PN TYN+ I G C L A F MA+
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
G PN VT+N L+ CK ++ + +K + + +D+ T L+ Y + G
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG---FNADIFTYNTLIHGYCQVGKL 367
Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
AL ++ M + + DI+ + +L++G C+NG+I SA F M + ++ YN +
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427
Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
++ LCK K+++A + L GV PD +Y +I GLC +G +A E + M E+ +
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Query: 398 V 398
+
Sbjct: 488 I 488
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 148/368 (40%), Gaps = 78/368 (21%)
Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
E A + EM +P P+ + +T + + ++ M GI + + I
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
L+H C+ L A+ LG+ M
Sbjct: 112 LIHCFCRCSRLSFALSVLGK--------------------------------------MM 133
Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
+ + IV + L++GFCL I AF+ M+K G+ P+V+ YNTL++ LCK G+L+
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
A + K G+ D ++Y T++ GLC G A L M+++S+ P
Sbjct: 194 IALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP--------- 244
Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEML 468
+V TF ALI + G++ A +LY EM+
Sbjct: 245 --------------------------DVVTFTALIDVFVKQ-----GNLDEAQELYKEMI 273
Query: 469 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 528
+ + P+ +TY +I G C G + +A++ F + + G + + + L + + + D
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333
Query: 529 KARDIHQK 536
+ + Q+
Sbjct: 334 EGMKLFQR 341
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 40/236 (16%)
Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL----------------------- 338
L GF + AFA F +M+ LP ++ + LL
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 339 ------------NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
+C C+ +L A G + K G P +++ +++ G C+ I A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
++ M++ P ++N +IDG + G+L+ A + + M G+ ++V T+N L+
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT-- 219
Query: 447 TRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 502
C G A ++ +M++R I PD++T+T LI +GN+ EA+E++ ++
Sbjct: 220 ---GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 187/370 (50%), Gaps = 9/370 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I LC K A KM+ +G PD T+N L+ CK G ++ A+ ++ +
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ TY + I G C E ++AL LF+ GI+PN + +N L+ L +G++ +A
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ E+ + +V T IL++ K G A L M K DI +N+LI
Sbjct: 412 QLANEM---SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+G+ + +A ML G PDV TYN+LLN LCK K ++ Y + + G A
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
P+ ++ +++ LC + + +A L M KSV P+ + +IDG+ + GDL A+++
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 424 -RDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 482
R + ++ VSS+ T+N +I A T ++ +A +L+ EM+ R + PD TY +
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKL-----NVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 483 IKGHCARGNM 492
+ G C GN+
Sbjct: 644 VDGFCKTGNV 653
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 204/428 (47%), Gaps = 18/428 (4%)
Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
MRD G + D ++ C + AL L M +G +V+ + +V
Sbjct: 137 MRDRG-----ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191
Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
+ + + +M S +T+N + C+ ++ + L + G+ PN
Sbjct: 192 YEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
T+N+ + LC++G L AV+ +G ++ + DVIT L+ KN KFQ +
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLI---EQGPKPDVITYNNLIYGLCKN-SKFQEAEV 307
Query: 284 W-NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
+ M + ++ D YN LI G+C G + A + GF+PD TY +L++ LC
Sbjct: 308 YLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367
Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
+G+ + A + G+ P+ I Y T+I+GL G I++A + M EK ++PE
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQ 462
+N++++G + G +S+A + +M+S G ++FTFN LI G S L + AL+
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI----HGYSTQL-KMENALE 482
Query: 463 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK--- 519
+ D ML G+ PD+ TY L+ G C ++ E + + G A + F IL +
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 520 RYRRMKES 527
RYR++ E+
Sbjct: 543 RYRKLDEA 550
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 193/413 (46%), Gaps = 8/413 (1%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+V +++ GK+ A+ + +M P V ++N +++ L G ++A V M
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ +P+ ++ + +C+ + AL L + M++ G N V + +V ++
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
+ + G++LA S T L+ K GD + L + + ++ + ++ YN
Sbjct: 199 EGYELFGKMLASGVSLCLS---TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
+ I G C G++ A ++++G PDVITYN L+ LCK K EA + G +
Sbjct: 256 LFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE 315
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
G+ PD +Y T+I G C G + A + + VP+ + +IDG G+ + A
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYT 480
++ + L G+ NV +N LI +G S N G I A QL +EM +G+ P++ T+
Sbjct: 376 LALFNEALGKGIKPNVILYNTLI----KGLS-NQGMILEAAQLANEMSEKGLIPEVQTFN 430
Query: 481 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 533
L+ G C G + +A+ + + + G D F IL Y + + A +I
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 121/236 (51%), Gaps = 2/236 (0%)
Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
K+ AL + M+ G PDV T+N L+N LCK E + M E +PN T+N
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
+ CR +LD+AL L M N + P+ VT L+ CK G L A ++ +
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM--E 593
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
+ K +S T I++ ++ + + A L+ +M + + D Y ++++GFC G++
Sbjct: 594 EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
+ + + +M++ GF+P + T ++NCLC + ++ EA+ + + G+ P+ ++
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 134/278 (48%), Gaps = 4/278 (1%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
++ LC G + A L + MI KG PD+ T N L++ +E A ++ M +
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ TYN+ + G C+ ++ + + + TM G PN T NIL+ +LC+ L +A+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVL 302
L E+ + D +T L+D + KNGD A L+ M + + + YN++
Sbjct: 552 GLLEEM---KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
I+ F +++ A F +M+ R PD TY +++ CK G ++ F + + G
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF 668
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
P + +I LC+ + +A + M++K +VPE
Sbjct: 669 IPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 134/319 (42%), Gaps = 12/319 (3%)
Query: 206 KALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
KAL +F++M G + T+ ++ L G + + EVL D + ++
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYG----KFEAMEEVLVDMRENVGNHMLEG 77
Query: 265 TIL--MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
+ M +Y + G +A+ ++ M + + + +YN +++ +G A + +M
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
RG PDV ++ + CK + A +S G + ++Y T++ G
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
+ E ML V +N ++ + GD+ + D ++ GV N+FT+N
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 443 ILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 502
I C G + A+++ ++ +G PD+ITY LI G C +EAE K+
Sbjct: 258 I-----QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 503 QTLGLAIDHIPFRILKKRY 521
GL D + L Y
Sbjct: 313 VNEGLEPDSYTYNTLIAGY 331
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 194/383 (50%), Gaps = 13/383 (3%)
Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
I C G++ AL M + P+V+T L++ CK GDLE A + +EM +R
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
S N TY A I G+C+ E+ +A ++S M + + PN + + ++ ++G +A+K
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
FL ++L + D+ +++ NG +A + DM + ++ D+V + ++N
Sbjct: 290 FLAKML---NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
+ +G + +A + ++++RGF PDV+ +T+++ + K G+L EA ++ +
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI-----EKA 401
Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
+ + Y +I LC GD ++ + E +VP+ ++ I G + G+L +AF ++
Sbjct: 402 NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461
Query: 425 DLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 484
M+ G+ ++ + LI + G + A Q++DEML GI+PD + LI+
Sbjct: 462 TRMVQEGLLLDLLAYTTLIYGLA-----SKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516
Query: 485 GHCARGNMKEAEEVFAKIQTLGL 507
+ GNM A ++ +Q GL
Sbjct: 517 AYEKEGNMAAASDLLLDMQRRGL 539
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 187/383 (48%), Gaps = 13/383 (3%)
Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
P+V+T++ ++ CK G+L+ A M SPN T+ I GYC+ +L+ A+ L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
+ M + N VT+ L+ CKKG + A + ++ D + + + T ++D
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED---RVEPNSLVYTTIIDG 277
Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
+F+ GD A+ M + ++ DI AY V+I+G C NG + A M K +PD
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
++ + T++N K G++ A + Y L + G PD ++ T+I G+ +G + +A +
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC 397
Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGA 450
+EK+ ++ V+ID + GD + + G+ + F + + I
Sbjct: 398 --IEKA---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI-----AG 447
Query: 451 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 510
C G++ A +L M++ G+ D++ YT LI G ++G M EA +VF ++ G++ D
Sbjct: 448 LCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507
Query: 511 HIPFRILKKRYRRMKESDKARDI 533
F +L + Y + A D+
Sbjct: 508 SAVFDLLIRAYEKEGNMAAASDL 530
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 190/404 (47%), Gaps = 42/404 (10%)
Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
++ +G P + N +V+ +CK+G ++ A+ ++ M P+ +YN+ I G+CR +
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 204 LDKA-LHLFSTMANNGI--RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
+ A L L S A++G +P+ V+ N L + K +L + ++G +L + +
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK----CCSPN 162
Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
V+T + +D++ K+G+ AL ++ M + + ++V + LI+G+C GD+ A + +
Sbjct: 163 VVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYK 222
Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
+M + +V+TY L++ CK+G++ A Y + + V P+ + Y TII G G
Sbjct: 223 EMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRG 282
Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
D A +FL ML + + + + VII G G L A I + M + ++ F
Sbjct: 283 DSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFT 342
Query: 441 ALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIIT---------------------- 478
++ A + G + A+ +Y +++ RG PD++
Sbjct: 343 TMMNAYFKS-----GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC 397
Query: 479 --------YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 514
YT LI C G+ E E +F+KI GL D +
Sbjct: 398 IEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMY 441
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 174/408 (42%), Gaps = 49/408 (12%)
Query: 137 ALWLRRKMIQKGTVPDVLTHN----YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
AL ++ + +PD T N L+N C I L+ +++ +P+ +++N
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSR----GYTPHRSSFN 60
Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
+ ++ C++ ++ A + +M G P+ +++N L+ C+ G + A L + A
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
D+++ L + F + ++ + K ++V Y+ I+ FC +G++
Sbjct: 121 HGFICKPDIVSFNSLFNG-FSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179
Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
A F M + P+V+T+ L++ CK G L+ A Y + + ++ + ++Y +
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
I G C G++ +A E M+E V P ++ IIDG+ + GD NA
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNA------------ 287
Query: 433 SSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 492
++ +ML +G+ DI Y +I G C G +
Sbjct: 288 ----------------------------MKFLAKMLNQGMRLDITAYGVIISGLCGNGKL 319
Query: 493 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 540
KEA E+ ++ L D + F + Y + A +++ K + R
Sbjct: 320 KEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 126/267 (47%), Gaps = 8/267 (2%)
Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
G A+ KM+ +G D+ + +++ LC G L++A ++ +M + P+ +
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
+ Y + + A++++ + G P+ V + ++ + K G L +A+ + A
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA 401
Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
+D + T+L+D+ K GD + L++ + + + D Y I G C G+
Sbjct: 402 ND--------VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN 453
Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
+ AF +M++ G L D++ Y TL+ L +G + EA + + +G++PD +
Sbjct: 454 LVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDL 513
Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVV 398
+I+ G++ A + LL M + +V
Sbjct: 514 LIRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
L D + + I LC G + A L+ +M+Q+G + D+L + L+ L G + +A
Sbjct: 434 LVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEAR 493
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
V EM SP+ A ++ I Y + + A L M G+
Sbjct: 494 QVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 64/161 (39%), Gaps = 13/161 (8%)
Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
EA F L K+ PD + I L + + +FL ++ + P +N ++
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEML 468
+ G + A I M FG +V ++N+LI C G I A L E L
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLI-----DGHCRNGDIRSA-SLVLESL 117
Query: 469 RRG----ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 505
R PDI+++ L G MK +EVF + +
Sbjct: 118 RASHGFICKPDIVSFNSLFNGF---SKMKMLDEVFVYMGVM 155
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 204/400 (51%), Gaps = 9/400 (2%)
Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
+ V+ LC K+ A+ R K P V++ N +++ CK+G ++ A +
Sbjct: 232 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 291
Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
+ P+ ++N I G C V + +AL L S M +G+ P+ VT+NIL G++
Sbjct: 292 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 351
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD-IVAY 299
A + + ++L D + DVIT TIL+ + G+ L L DM + + + I+
Sbjct: 352 GAWEVIRDML---DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 408
Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
+V+++G C G I A + F QM G PD++ Y+ +++ LCK GK D A Y +
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468
Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
+ P+ ++ ++ GLC G +++AR L S++ + ++N++IDGY + G +
Sbjct: 469 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 528
Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITY 479
A + +++ G++ +V TFN+LI C +I A ++ D + G+ P +++Y
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIY-----GYCKTQNIAEARKILDVIKLYGLAPSVVSY 583
Query: 480 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 519
T L+ + GN K +E+ +++ G+ ++ + ++ K
Sbjct: 584 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 623
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 183/370 (49%), Gaps = 13/370 (3%)
Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
T++ +V+ LC+ LE A +R P+ ++N+ ++GYC++ +D A F T+
Sbjct: 231 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 290
Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK--ATSDVITSTILMDSYF 272
G+ P+ +HNIL++ LC G + +A++ LA D K D +T IL +
Sbjct: 291 LKCGLVPSVYSHNILINGLCLVGSIAEALE-----LASDMNKHGVEPDSVTYNILAKGFH 345
Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF-LPDV 331
G A + DM K + D++ Y +L+ G C G+I ML RGF L +
Sbjct: 346 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 405
Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
I + +L+ LCK G++DEA + + G++PD ++Y +I GLC G A
Sbjct: 406 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 465
Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGAS 451
M +K ++P ++ G + G L A S+ D ++S G + ++ +N +I +
Sbjct: 466 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS-- 523
Query: 452 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 511
G I AL+L+ ++ GITP + T+ LI G+C N+ EA ++ I+ GLA
Sbjct: 524 ---GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 580
Query: 512 IPFRILKKRY 521
+ + L Y
Sbjct: 581 VSYTTLMDAY 590
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 206/439 (46%), Gaps = 28/439 (6%)
Query: 100 RLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYL 159
R +D GP + + ++ C G + A +++ G VP V +HN L
Sbjct: 253 RTSEWKDIGPSVVSFNS-------IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNIL 305
Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
+N LC +G + +A + +M++ P+ TYN G+ + + A + M + G+
Sbjct: 306 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 365
Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
P+ +T+ IL+ C+ G + + L ++L+ G + +I ++++ K G +
Sbjct: 366 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLS--RGFELNSIIPCSVMLSGLCKTGRIDE 423
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
AL+L+N M + D+VAY+++I+G C G A + +M + LP+ T+ LL
Sbjct: 424 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 483
Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
LC++G L EA L +G D + Y +I G G I +A E ++E + P
Sbjct: 484 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 543
Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHL 459
+N +I GY + +++ A I D++ +G++ +V ++ L+ A N G+
Sbjct: 544 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM-----DAYANCGNTKS 598
Query: 460 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE------AEEVFAK-------IQTLG 506
+L EM GI P +TY+ + KG C RG E E +F K +++ G
Sbjct: 599 IDELRREMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCKQGLRDMESEG 657
Query: 507 LAIDHIPFRILKKRYRRMK 525
+ D I + + + R+K
Sbjct: 658 IPPDQITYNTIIQYLCRVK 676
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 201/453 (44%), Gaps = 51/453 (11%)
Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKG-TVPDVLTHNYL 159
++ M D G L D + ++ C G I L L + M+ +G + ++ + +
Sbjct: 357 IRDMLDKG-----LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 411
Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
++ LCK G +++A + +M SP+ Y+ I G C++ + D AL L+ M + I
Sbjct: 412 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 471
Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
PN TH L+ LC+KG+L +A L +++ + T D++ I++D Y K+G +
Sbjct: 472 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE---TLDIVLYNIVIDGYAKSGCIEE 528
Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
AL L+ + + I + +N LI G+C +I+ A + G P V++Y TL++
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 588
Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC---IHGD---IVKAREF----- 388
G + G+ P ++Y I +GLC H + +++ R F
Sbjct: 589 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 648
Query: 389 -LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI---- 443
L M + + P+ +N II R LS AF ++M S + ++ T+N LI
Sbjct: 649 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 708
Query: 444 --------------LAETR------------GASCNLGHIHLALQLYDEMLRRGITPDII 477
L E A C G +A++L+ ++L RG I
Sbjct: 709 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 768
Query: 478 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 510
Y+ +I C R + E++ F + + G++ D
Sbjct: 769 DYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 176/403 (43%), Gaps = 25/403 (6%)
Query: 94 LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
+ E L M+ G L D + VI LC GK ALWL +M K +P+
Sbjct: 421 IDEALSLFNQMKADG-----LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 475
Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
TH L+ LC+ G L +A ++ + + + YN I GY + +++AL LF
Sbjct: 476 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 535
Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
+ GI P+ T N L++ CK + +A K L + G A S V++ T LMD+Y
Sbjct: 536 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLY--GLAPS-VVSYTTLMDAYAN 592
Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC-------LNGDISSAFAYFCQ----- 321
G+ L +M + I V Y+V+ G C N + C+
Sbjct: 593 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 652
Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
M G PD ITYNT++ LC+ L A F ++ + +Y +I LC++G
Sbjct: 653 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 712
Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
I KA F+ S+ E++V + +I + GD A + +L G + ++ ++A
Sbjct: 713 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 772
Query: 442 LILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 484
+I R N L ML +GI+PD+ +IK
Sbjct: 773 VINRLCRRHLVNESKFFFCL-----MLSQGISPDLDICEVMIK 810
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 127/248 (51%), Gaps = 12/248 (4%)
Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
+F+ DK +W D++++ + Y+ +++G C + A + + P
Sbjct: 210 HFRETDK-----MW-DVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPS 263
Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
V+++N++++ CK G +D A F+ + K G+ P S+ +I GLC+ G I +A E
Sbjct: 264 VVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 323
Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGA 450
M + V P+ +N++ G+ G +S A+ + ML G+S +V T+ L+ +
Sbjct: 324 DMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQ---- 379
Query: 451 SCNLGHIHLALQLYDEMLRRGITPD-IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 509
C LG+I + L L +ML RG + II + ++ G C G + EA +F +++ GL+
Sbjct: 380 -CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSP 438
Query: 510 DHIPFRIL 517
D + + I+
Sbjct: 439 DLVAYSIV 446
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 210/449 (46%), Gaps = 33/449 (7%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+++ +C GK+ L KG +P+++ +N ++ CK+GD+E A V +E+
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P T+ I G+C+ + + L S + G+R + N ++ A + G D
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ +G ++A+D DV T IL++ K G K A+ ++ +K + + ++Y LI
Sbjct: 331 ESIGWIIAND---CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLI 387
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
+C + + A QM +RG PD++TY L++ L G +D+A + L GV+
Sbjct: 388 QAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVS 447
Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
PD Y ++ GLC G + A+ ML+++++P+ +++ +IDG+ R GD A +
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 424 RDLMLSFGVSSNVFTFNALI--------LAETRGASCNLGHIHL---------------- 459
L + GV +V NA+I L E + HL
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 460 ------ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 513
A++++ M + P+++TYT LI G C +G+ K AEE F ++Q L + +
Sbjct: 568 QQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627
Query: 514 FRILKKRYRRMKESDKARDIHQKWLLRNK 542
+ L + + + + + + ++ NK
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNK 656
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 183/388 (47%), Gaps = 31/388 (7%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
+I L + G + A+ ++ K+I +G PD +N L++ LCK G A + EM +
Sbjct: 421 LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN 480
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ Y I G+ R + D+A +FS G++ + V HN ++ C+ G+L +A+
Sbjct: 481 ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL 540
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ + ++ D T + ++D Y K D A+ ++ M + + ++V Y LI
Sbjct: 541 ACMNRM---NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK-LDEASHFYGVLSKTGV 362
NGFC GD A F +M R +P+V+TY TL+ L K+ L++A +++ ++
Sbjct: 598 NGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKC 657
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
P+++++ ++QG + V+ EP N +G+ S F
Sbjct: 658 VPNEVTFNCLLQGF-------------VKKTSGKVLAEPDGSN-----HGQSSLFSEFFH 699
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 482
M S G S + +N+ ++ C G + A D+M+++G +PD +++ +
Sbjct: 700 ---RMKSDGWSDHAAAYNSALVC-----LCVHGMVKTACMFQDKMVKKGFSPDPVSFAAI 751
Query: 483 IKGHCARGNMKEAEEV-FAKIQTLGLAI 509
+ G C GN K+ + F + GL +
Sbjct: 752 LHGFCVVGNSKQWRNMDFCNLGEKGLEV 779
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 170/382 (44%), Gaps = 8/382 (2%)
Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
+VPDV+ N L++ L K L A V EM + S + + + G C +++
Sbjct: 166 SVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGR 225
Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
L G PN V +N ++ CK G + +A E+ + T ++
Sbjct: 226 KLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG---FMPTLETFGTMI 282
Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
+ + K GD + L +++ ++ ++ + N +I+ +G ++
Sbjct: 283 NGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK 342
Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
PDV TYN L+N LCK+GK + A F SK G+ P+ +SY +IQ C + A +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
LL M E+ P+ + ++I G G + +A +++ ++ GVS + +N L+
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM----- 457
Query: 449 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 508
C G A L+ EML R I PD Y LI G G+ EA +VF+ G+
Sbjct: 458 SGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVK 517
Query: 509 IDHIPFRILKKRYRRMKESDKA 530
+D + + K + R D+A
Sbjct: 518 VDVVHHNAMIKGFCRSGMLDEA 539
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 9/322 (2%)
Query: 197 GYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
Y L KA+ ++ + P+ + N L+ L K LGDA K E+ D
Sbjct: 143 AYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGD- 201
Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
+ D ++ IL+ G L + K +IV YN +I G+C GDI +A
Sbjct: 202 --SVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
+ F ++ +GF+P + T+ T++N CK+G + + + G+ II
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319
Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
HG V E + ++ P+ +N++I+ + G A D G+ N
Sbjct: 320 KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPN 379
Query: 436 VFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 495
++ LI A C +A +L +M RG PDI+TY LI G G+M +A
Sbjct: 380 NLSYAPLI-----QAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDA 434
Query: 496 EEVFAKIQTLGLAIDHIPFRIL 517
+ K+ G++ D + +L
Sbjct: 435 VNMKVKLIDRGVSPDAAIYNML 456
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 140/304 (46%), Gaps = 20/304 (6%)
Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
++ D H A+I+ C G + AL +M ++ VPD T++ +++ K D+ A
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575
Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
+ R M + + PN TY + I G+C + A F M + PN VT+ L+ +L
Sbjct: 576 KIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK----------NGDKFQALAL 283
K+ + + E++ + K + +T L+ + K +G +L
Sbjct: 636 AKESSTLEKAVYYWELMMTN--KCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSL 693
Query: 284 WNDMFQKNIQTD-----IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
+++ F + +++D AYN + C++G + +A + +M+K+GF PD +++ +L
Sbjct: 694 FSEFFHR-MKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Query: 339 NCLCKQGKLDEASHF-YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
+ C G + + + L + G+ + Y +++ I +A L +M+EK+
Sbjct: 753 HGFCVVGNSKQWRNMDFCNLGEKGLEV-AVRYSQVLEQHLPQPVICEASTILHAMVEKAD 811
Query: 398 VPEP 401
EP
Sbjct: 812 TKEP 815
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 186/400 (46%), Gaps = 9/400 (2%)
Query: 132 GKIGTA-LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
GKI A WL MIQ+G +PD T ++ LC+ G + +A R+M ++ PN
Sbjct: 231 GKIQEADRWLT-GMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLIN 289
Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
+ + I G C+ + +A + M NG +PN TH L+ LCK+G A + +++
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
D K +V T T ++ Y K +A L++ M ++ + ++ Y LING C G
Sbjct: 350 RSDTYKP--NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG 407
Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
A+ M GF+P++ TYN ++ LCK+ + EA G+ D ++Y
Sbjct: 408 SFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYT 467
Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
+IQ C DI +A F M + + + N++I + R + + + L++S
Sbjct: 468 ILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL 527
Query: 431 GVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 490
G+ T+ ++I C G I LAL+ + M R G PD TY LI G C +
Sbjct: 528 GLIPTKETYTSMI-----SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKS 582
Query: 491 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 530
+ EA +++ + GL+ + L Y + +S A
Sbjct: 583 MVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANA 622
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 168/375 (44%), Gaps = 44/375 (11%)
Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
++I LC G I A + +M++ G P+V TH L++ LCK G EKA + ++
Sbjct: 291 TSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR 350
Query: 182 MRP-SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
PN TY + I GYC+ ++L++A LFS M G+ PN T+ L++ CK G G
Sbjct: 351 SDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFG 410
Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
A + + L D+G ++ T +DS K +A L N F ++ D V Y
Sbjct: 411 RAYELMN--LMGDEG-FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYT 467
Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
+LI C DI+ A A+FC+M K GF D+ N L+ C+Q K+ E+ + ++
Sbjct: 468 ILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL 527
Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
G+ P + +Y ++I C GDI A ++ +M VP+ + +I G
Sbjct: 528 GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL--------- 578
Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYT 480
C + A +LY+ M+ RG++P +T
Sbjct: 579 -------------------------------CKKSMVDEACKLYEAMIDRGLSPPEVTRV 607
Query: 481 ELIKGHCARGNMKEA 495
L +C R + A
Sbjct: 608 TLAYEYCKRNDSANA 622
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 185/385 (48%), Gaps = 9/385 (2%)
Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
++R+ G++ A+ + M +G P +T N ++ ++G +E A++V EMS
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
P+ ++Y + G R ++ +A + M G P+ T +++ ALC+ GL+ A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
+ +++ D ++I T L+D K G QA + +M + + ++ + LI
Sbjct: 273 WYFRKMI---DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 329
Query: 304 NGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
+G C G AF F ++++ + P+V TY +++ CK+ KL+ A + + + G+
Sbjct: 330 DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389
Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
P+ +Y T+I G C G +A E + M ++ +P + +N ID + A+
Sbjct: 390 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 449
Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 482
+ + S G+ ++ T+ LI + C I+ AL + M + G D+ L
Sbjct: 450 LLNKAFSCGLEADGVTYTILIQEQ-----CKQNDINQALAFFCRMNKTGFEADMRLNNIL 504
Query: 483 IKGHCARGNMKEAEEVFAKIQTLGL 507
I C + MKE+E +F + +LGL
Sbjct: 505 IAAFCRQKKMKESERLFQLVVSLGL 529
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 4/285 (1%)
Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
T + + + ++I C K+ A L +M ++G P+V T+ L+N CK G +A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
++ M + PN TYNA I C+ + +A L + + G+ + VT+ IL+
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
CK+ + A+ F + + +D+ + IL+ ++ + ++ L+ + +
Sbjct: 473 QCKQNDINQALAFFCRM---NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
Y +I+ +C GDI A YF M + G +PD TY +L++ LCK+ +DEA
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 589
Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
Y + G++P +++ T+ C D A LL L+K +
Sbjct: 590 LYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM-ILLEPLDKKL 633
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 151/344 (43%), Gaps = 61/344 (17%)
Query: 158 YLV--NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
YLV + L G+L+KA V+R M + + + L++A+ + M
Sbjct: 130 YLVTADSLLANGNLQKAHEVMRCM---------------LRNFSEIGRLNEAVGMVMDMQ 174
Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
N G+ P+ +T N ++ + GL+ Y +N
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLI------------------------------EYAEN- 203
Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
++++M + + D +Y +++ G +G I A + M++RGF+PD T
Sbjct: 204 -------VFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCT 256
Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
+L LC+ G ++ A ++ + G P+ I++ ++I GLC G I +A E L M+
Sbjct: 257 LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 316
Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGASCNL 454
P + +IDG + G AF + L+ S NV T+ ++I G C
Sbjct: 317 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMI-----GGYCKE 371
Query: 455 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 498
++ A L+ M +G+ P++ TYT LI GHC G+ A E+
Sbjct: 372 DKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 6/235 (2%)
Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
C LE D + +I++ C I AL +M + G D+ +N L+ C+ +++
Sbjct: 457 CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 516
Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
++ + + + + P TY + I+ YC+ ++D AL F M +G P+ T+ L+
Sbjct: 517 SERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 576
Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
LCKK ++ +A K ++ D G + +V T L Y K D A+ L + +K
Sbjct: 577 GLCKKSMVDEACKLYEAMI--DRGLSPPEV-TRVTLAYEYCKRNDSANAMILLEPLDKK- 632
Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
I L+ C + A +F ++L++ D +T + GK
Sbjct: 633 --LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 685
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 201,585,024
Number of Sequences: 539616
Number of extensions: 8487215
Number of successful extensions: 35833
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 24136
Number of HSP's gapped (non-prelim): 3476
length of query: 542
length of database: 191,569,459
effective HSP length: 122
effective length of query: 420
effective length of database: 125,736,307
effective search space: 52809248940
effective search space used: 52809248940
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)