Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>009145
MCVCGATNILADDLLPNKTLRNTINRILESGNNSSAENAGSTFQVQDMESARCPPPPKVP
SPTMSAASKGEQKLSAGDKETPIAMETTDVGKAVITATQSVEKVPPAAKVVDVSEATLES
ASVKEPASQGSAPMVDEEVQQKMASGEAAKKKKKKKVRAPANDLQWKTPQDLAAESCMMP
LGPSAYNPPAAYNPYWTGIQPGMEGYMGPFAGAMPYMPYGMGPLDMAFGGVMPQEPFAAQ
GYMMPVVPPQRDLAEFGMGMGMNVPPHIMSREEFEARKADVRRKRENERRGEREFSRDRE
YGREVSSGGDASSMKSKSKSVPQVSSADHHHHHRHRPVRSSPEPPLPPPPRPSKRKSEHH
HHLDRDRDYDYEYDREREREREREREKERERDRNHHHRTESSSKHSSEPPTTTTSSKPTS
TAAAGADKKHKGSVFSRISFPEEEAAAKKRKISLSSSSEAVVSGVSGHQKLPTNTNGYYD
DYKSSSSHSAKALKTAASRGADYESSDDDRHFKRKPSRYEPSPPPPTADWDDEPRLRRKH
NR

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  009145
        (542 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2171569 - symbol:AT5G47430 species:3702 "Arabi...   432  1.5e-46   2


>TAIR|locus:2171569 [details] [associations]
            symbol:AT5G47430 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006470 "protein dephosphorylation" evidence=RCA] [GO:0007062
            "sister chromatid cohesion" evidence=RCA] [GO:0031048 "chromatin
            silencing by small RNA" evidence=RCA] [GO:0045132 "meiotic
            chromosome segregation" evidence=RCA] InterPro:IPR001841
            InterPro:IPR001878 InterPro:IPR014891 Pfam:PF08783 PROSITE:PS51282
            SMART:SM00184 SMART:SM00343 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003676
            Gene3D:3.30.40.10 InterPro:IPR013083 KO:K10624 EMBL:AK316913
            IPI:IPI00547250 RefSeq:NP_199554.2 UniGene:At.29893
            ProteinModelPortal:B9DFV2 SMR:B9DFV2 PRIDE:B9DFV2
            EnsemblPlants:AT5G47430.1 GeneID:834790 KEGG:ath:AT5G47430
            TAIR:At5g47430 HOGENOM:HOG000015179 OMA:IISKSMC PhylomeDB:B9DFV2
            ProtClustDB:CLSN2699121 Genevestigator:B9DFV2 Uniprot:B9DFV2
        Length = 892

 Score = 432 (157.1 bits), Expect = 1.5e-46, Sum P(2) = 1.5e-46
 Identities = 125/305 (40%), Positives = 160/305 (52%)

Query:     1 MCVCGATNILADDLLPNKTLRNTINRILXXXXXXXXXXXXXTFQVQDMESARCXXXXXXX 60
             MCVCG +++LADDLLPNKTLR+TINRIL                + D+ESARC       
Sbjct:   330 MCVCGRSDVLADDLLPNKTLRDTINRILEAGNDSTENVGSVG-HIPDLESARCPPPKALS 388

Query:    61 XXTMSAASKGEQK--LSAG-DKETPIA-METTDVGKAV-ITATQSVEKVPPAAKVVDVSE 115
               T S ASKGE+K  LS   D  T  A ME  ++  A   +A  +VEK  P    VD  E
Sbjct:   389 PTT-SVASKGEKKPVLSNNNDASTLKAPMEVAEITSAPRASAEVNVEK--P----VDACE 441

Query:   116 ATLESASVKEPA-SQGSAPMVDEEVQQKMASGEAAXXXXXXXVRAPANDLQWKTPQDLAA 174
             +T  S  VKE   S+ +     EE+QQ++A+GE          R P ND+QW    DLA 
Sbjct:   442 STQGSVIVKEATVSKLNTQAPKEEMQQQVAAGEPGKKKKKKP-RVPGNDMQWNPVPDLAG 500

Query:   175 ESCMMPLGPSXXXXXXXXXXX------WTGIQPGMEGYM-------GPFAGAMP-YMPYG 220
                MM +GP                  + G+QPG  G+        GPF GAMP +M YG
Sbjct:   501 PDYMMQMGPGPQYFNGMQPGFNGVQPGFNGVQPGFNGFHPGFNGFGGPFPGAMPPFMGYG 560

Query:   221 MGPLDMAFGG---VMPQEPFAAQGYMMP-VVPPQRDLAEFGMGMGMNVPPHIMSREEFEA 276
             + P+DM FGG   +M  +PF AQG+  P + PP RDLAE  MG  MN+   +M R+E EA
Sbjct:   561 LNPMDMGFGGGMNMMHPDPFMAQGFGFPNIPPPHRDLAE--MGNRMNLQRAMMGRDEAEA 618

Query:   277 RKADV 281
             R A++
Sbjct:   619 RNAEM 623

 Score = 91 (37.1 bits), Expect = 1.5e-46, Sum P(2) = 1.5e-46
 Identities = 27/83 (32%), Positives = 35/83 (42%)

Query:   431 KGSVFSRISFPEEEAAA-KKRKIXXXXXXXXXXXXXXGHQKLPTNTNGYYDDYXXXXXXX 489
             K SVF+RISFPEEE ++ K+RK+                      T+ +           
Sbjct:   786 KSSVFARISFPEEETSSGKRRKVPSSSSTSVTDPSASASAAAAVGTSVH----------- 834

Query:   490 XXXXXXXXXRGADYESSDDDRHF 512
                        ADYESSD+DRHF
Sbjct:   835 -RHSSRKEIEVADYESSDEDRHF 856


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.129   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      542       327   0.00088  116 3  11 23  0.45    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  213 KB (2118 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.13u 0.11s 24.24t   Elapsed:  00:00:02
  Total cpu time:  24.13u 0.11s 24.24t   Elapsed:  00:00:02
  Start:  Tue May 21 04:50:03 2013   End:  Tue May 21 04:50:05 2013

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