Your job contains 1 sequence.
>009148
MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD
VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI
VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK
ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW
NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVY
NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML
LEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVATLSNKR
KTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPP
DSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSL
FL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009148
(542 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2010667 - symbol:TAFII59 "TATA BOX ASSOCIATED ... 1743 1.5e-179 1
DICTYBASE|DDB_G0288471 - symbol:taf6 "TATA-binding protei... 474 7.5e-86 3
POMBASE|SPCC16C4.18c - symbol:taf6 "histone H4-like TAF T... 451 2.8e-78 2
UNIPROTKB|J9NS44 - symbol:TAF6 "Uncharacterized protein" ... 387 4.5e-73 3
UNIPROTKB|E2RFB9 - symbol:TAF6 "Uncharacterized protein" ... 387 6.4e-73 3
UNIPROTKB|Q58DG7 - symbol:TAF6 "TBP-associated factor 6 i... 387 1.5e-72 3
RGD|1311608 - symbol:Taf6 "TAF6 RNA polymerase II, TATA b... 377 8.9e-69 3
ZFIN|ZDB-GENE-040912-23 - symbol:taf6 "TAF6 RNA polymeras... 375 1.9e-68 2
UNIPROTKB|P49848 - symbol:TAF6 "Transcription initiation ... 375 2.8e-68 3
MGI|MGI:109129 - symbol:Taf6 "TAF6 RNA polymerase II, TAT... 377 3.8e-68 3
UNIPROTKB|J3KR72 - symbol:TAF6 "Transcription initiation ... 375 6.6e-68 3
ASPGD|ASPL0000017134 - symbol:AN8232 species:162425 "Emer... 679 8.2e-67 1
UNIPROTKB|Q91857 - symbol:taf6 "Transcription initiation ... 367 1.0e-65 2
SGD|S000003080 - symbol:TAF6 "Subunit (60 kDa) of TFIID a... 364 2.4e-63 2
FB|FBgn0010417 - symbol:Taf6 "TBP-associated factor 6" sp... 379 7.3e-63 2
CGD|CAL0005584 - symbol:TAF60 species:5476 "Candida albic... 359 1.3e-62 2
UNIPROTKB|Q5A2V7 - symbol:TAF6 "Putative uncharacterized ... 359 1.3e-62 2
UNIPROTKB|G8JLM6 - symbol:TAF6 "Transcription initiation ... 378 1.5e-35 2
UNIPROTKB|C9JTY6 - symbol:TAF6 "Transcription initiation ... 352 3.5e-34 2
ZFIN|ZDB-GENE-030131-6789 - symbol:taf6l "TAF6-like RNA p... 232 2.2e-32 3
UNIPROTKB|F1MDZ8 - symbol:TAF6L "Uncharacterized protein"... 242 1.1e-31 2
MGI|MGI:2444957 - symbol:Taf6l "TAF6-like RNA polymerase ... 234 1.6e-31 2
UNIPROTKB|I3LPI1 - symbol:TAF6L "Uncharacterized protein"... 233 2.2e-31 2
UNIPROTKB|E2QUN8 - symbol:TAF6L "Uncharacterized protein"... 234 5.7e-31 2
UNIPROTKB|Q9Y6J9 - symbol:TAF6L "TAF6-like RNA polymerase... 224 6.1e-30 2
UNIPROTKB|E5RHA1 - symbol:TAF6 "Transcription initiation ... 290 5.2e-25 1
UNIPROTKB|C9JIS2 - symbol:TAF6 "Transcription initiation ... 282 4.0e-24 1
UNIPROTKB|C9JFL8 - symbol:TAF6 "Transcription initiation ... 281 5.2e-24 1
RGD|1310123 - symbol:Taf6l "TAF6-like RNA polymerase II, ... 184 1.6e-23 2
UNIPROTKB|C9J088 - symbol:TAF6 "Transcription initiation ... 276 1.8e-23 1
FB|FBgn0014342 - symbol:mia "meiosis I arrest" species:72... 275 5.2e-21 1
UNIPROTKB|C9J7C4 - symbol:TAF6 "Transcription initiation ... 222 1.5e-17 1
UNIPROTKB|F8WEJ7 - symbol:TAF6 "Transcription initiation ... 217 5.1e-17 1
UNIPROTKB|E5RKA5 - symbol:TAF6 "Transcription initiation ... 196 9.6e-15 1
WB|WBGene00021363 - symbol:taf-6.2 species:6239 "Caenorha... 209 2.9e-13 2
UNIPROTKB|E9PP94 - symbol:TAF6L "TAF6-like RNA polymerase... 180 5.2e-13 1
WB|WBGene00006387 - symbol:taf-6.1 species:6239 "Caenorha... 165 7.5e-12 2
UNIPROTKB|C9JHQ8 - symbol:TAF6 "Transcription initiation ... 146 2.4e-09 1
>TAIR|locus:2010667 [details] [associations]
symbol:TAFII59 "TATA BOX ASSOCIATED FACTOR II 59"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA;ISS] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0009860
"pollen tube growth" evidence=IMP] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 InterPro:IPR016024
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 EMBL:CP002684 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006352
GO:GO:0009860 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0003743
EMBL:AC004809 GO:GO:0051090 KO:K03131 HSSP:P49847 OMA:LEMIYSL
UniGene:At.46000 EMBL:AY050962 EMBL:AY091292 EMBL:AY463621
IPI:IPI00521178 PIR:A86183 RefSeq:NP_001030969.1 RefSeq:NP_171987.1
RefSeq:NP_849592.1 UniGene:At.47479 ProteinModelPortal:Q9MAU3
SMR:Q9MAU3 IntAct:Q9MAU3 STRING:Q9MAU3 PRIDE:Q9MAU3
EnsemblPlants:AT1G04950.1 EnsemblPlants:AT1G04950.2
EnsemblPlants:AT1G04950.3 GeneID:839370 KEGG:ath:AT1G04950
TAIR:At1g04950 InParanoid:Q9MAU3 PhylomeDB:Q9MAU3
ProtClustDB:CLSN2681958 ArrayExpress:Q9MAU3 Genevestigator:Q9MAU3
Uniprot:Q9MAU3
Length = 549
Score = 1743 (618.6 bits), Expect = 1.5e-179, P = 1.5e-179
Identities = 355/552 (64%), Positives = 424/552 (76%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKETVEVIAQSIGI+N +AAL LAPDVEYR+REIMQEAIKCMRHS+RTTLT D
Sbjct: 1 MSIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEP+YGFASGGP RFR+AIG+RDLFY DD++V+FKDVIEAPLP+APLDT I
Sbjct: 61 VDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEI 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
VCHWLAIEGVQP IPENAP++ I AP+ +EQKDG ++++LPVKH+LSRELQLYF K
Sbjct: 121 VCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQKDGPLIDVRLPVKHVLSRELQLYFQK 180
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
I ELA+S+S+ L+K+ALVSLA+DSGLHPLVPYFT F+ADEVS GLN++ LLF LM +V
Sbjct: 181 IAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLNDFRLLFNLMHIVR 240
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVY 300
+LLQNPHI IEPYLHQLMPSVVTCLV+++LGNR ADNHWELRDF A LV+ ICKRYG VY
Sbjct: 241 SLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAANLVSLICKRYGTVY 300
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXXXXXXXXXXXXXXXXEPEML 360
TLQ+RLT+TL+NALLDPK+ALTQHYGA+QGLAA EPE+
Sbjct: 301 ITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLEPELN 360
Query: 361 LEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG---IVATLS 417
EKQKN++K +EAWRVYGALL+AAG CI+ RLKIFPPL S + K G I++T
Sbjct: 361 AEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSFLHKGKGKGKIISTDP 420
Query: 418 NKRKTSMDLEE-QPPLKKIAT-DGPVDAVSTS--SMPTPMEEDATAATPLDNSDADHPSP 473
+KRK S+D E Q P K++ T DGP D V + S PM+ D DN + P
Sbjct: 421 HKRKLSVDSSENQSPQKRLITMDGP-DGVHSQDQSGSAPMQVDNPVEN--DNPPQNSVQP 477
Query: 474 SSVQIPPDSG-SESRSKRDK--GDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGIL 530
SS + D+ SESR+ + K G S+A + AIL Q+WKDDL+SG+LLV L EL+G+ IL
Sbjct: 478 SSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRIL 537
Query: 531 SFIPAPEMSLFL 542
FIP+ EMS+FL
Sbjct: 538 PFIPSTEMSVFL 549
>DICTYBASE|DDB_G0288471 [details] [associations]
symbol:taf6 "TATA-binding protein-associated-factor"
species:44689 "Dictyostelium discoideum" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0005669 "transcription factor TFIID complex" evidence=ISS]
[GO:0000124 "SAGA complex" evidence=ISS] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 dictyBase:DDB_G0288471 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016568 GenomeReviews:CM000154_GR
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AAFI02000111 GO:GO:0000124
GO:GO:0006367 GO:GO:0051090 GO:GO:0005669 eggNOG:COG5095 KO:K03131
OMA:EPLYGYD RefSeq:XP_636709.1 ProteinModelPortal:Q54IW7
STRING:Q54IW7 EnsemblProtists:DDB0231094 GeneID:8626641
KEGG:ddi:DDB_G0288471 InParanoid:Q54IW7 ProtClustDB:CLSZ2730274
Uniprot:Q54IW7
Length = 542
Score = 474 (171.9 bits), Expect = 7.5e-86, Sum P(3) = 7.5e-86
Identities = 96/225 (42%), Positives = 143/225 (63%)
Query: 162 IKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADE 221
+K VKH+LS+E+Q++++KIT +V + LF AL SL +DS LH L+PYF F++ +
Sbjct: 243 VKPTVKHVLSKEIQMFYEKITN-SVKSDNQKLFDAALHSLKSDSSLHQLLPYFINFISVQ 301
Query: 222 VSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWEL 281
V++ L N LL LM++ +L++ H++ E YLHQLMPS++TCLV K+L N ++NHWEL
Sbjct: 302 VTQNLTNLELLNRLMKMAQAILESKHLKPELYLHQLMPSILTCLVGKKLCNSPSENHWEL 361
Query: 282 RDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXX 341
RDF A+LV+ +C+++G VY++LQ R+TKTL+ L D + LT HYGA+ GL+
Sbjct: 362 RDFAARLVSFVCRKFGDVYSSLQGRITKTLVQTLHDTTKPLTTHYGAIVGLSGLGRNVIQ 421
Query: 342 XXXXXXXXXXXXXXEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQ 386
EPE L N +K EA RV +++ A G+
Sbjct: 422 FLLLPYVPKYYKLLEPE-LNNNLSNPIKSMEANRVLNSIIDATGK 465
Score = 365 (133.5 bits), Expect = 7.5e-86, Sum P(3) = 7.5e-86
Identities = 71/178 (39%), Positives = 116/178 (65%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS++P +T+++IA+S GISN + A LA DVEYRIREI QEAIK M+HS+R L+TDD
Sbjct: 1 MSVLPNDTIKIIAESAGISNLPDEIAQQLASDVEYRIREIAQEAIKFMKHSKRDHLSTDD 60
Query: 61 VDEALKLRNVEPVYGFASGGP----LRFRRAIGYRD-LFYLDDKDVEFKDVIEAPLPRAP 115
++ AL LRN+E +YG++ L+F++ +++L+DK++ F+++ PLP+ P
Sbjct: 61 INNALGLRNIEQLYGYSCSANDHSLLKFQKTTTTTQAIYFLNDKEMTFQEIASQPLPKVP 120
Query: 116 LDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRE 173
D S+ HWLA+EGVQP+IP+N I + + K ++++ + +L+++
Sbjct: 121 RDPSLSAHWLALEGVQPLIPQNPSPYEIEEHHKNLHKKFKSEKALQLEQQAQALLTQQ 178
Score = 52 (23.4 bits), Expect = 7.5e-86, Sum P(3) = 7.5e-86
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 490 RDKGDSQAQKLSA-ILPQVWKDD-LNSGKLLV-SLFELFGEGILSFI 533
+D S+ Q +S I+ + +++ L + K+ SLF+LFGE +L++I
Sbjct: 483 KDDTTSKKQPISLPIITEFSRENILKTLKIQYQSLFDLFGEKLLAYI 529
>POMBASE|SPCC16C4.18c [details] [associations]
symbol:taf6 "histone H4-like TAF Taf6, SAGA complex
subunit" species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA
complex" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005669 "transcription factor TFIID complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IC] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISO]
[GO:0016573 "histone acetylation" evidence=IC] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 InterPro:IPR016024 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 PomBase:SPCC16C4.18c GO:GO:0005829 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0016573 GO:GO:0006338 GO:GO:0000790
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0006367
GO:GO:0051090 GO:GO:0005669 eggNOG:COG5095 KO:K03131 PIR:T41108
RefSeq:NP_587928.1 HSSP:P49847 ProteinModelPortal:O74462
STRING:O74462 EnsemblFungi:SPCC16C4.18c.1 GeneID:2539133
KEGG:spo:SPCC16C4.18c HOGENOM:HOG000159894 OMA:EPLYGYD
OrthoDB:EOG45XC4M NextBio:20800305 Uniprot:O74462
Length = 452
Score = 451 (163.8 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 99/228 (43%), Positives = 142/228 (62%)
Query: 107 IEAPLPRAPLDTS-IVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLP 165
++ +P+ P + V W A +G V+P A A A NG + VEIK
Sbjct: 135 VQPAIPQNPTPSDHTVGEW-ASKGTSGVMP-GASTAAKEA-RNGVTSMDN----VEIKPL 187
Query: 166 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 225
V+H+LS+ELQLYF++IT + ++ L AL SL D GLH L+PYF F++D V+R
Sbjct: 188 VRHVLSKELQLYFERITSALLDETNVELRDAALSSLRDDPGLHQLLPYFIMFLSDSVTRN 247
Query: 226 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN-HWELRDF 284
L N +L LM + W LL NP++ +EPY+ QLMPS++TCLVAKRLG+ ++ H+ LRD
Sbjct: 248 LGNLVVLTTLMHMAWALLDNPNLFVEPYVQQLMPSILTCLVAKRLGSDPNNHEHYALRDL 307
Query: 285 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGL 332
A L+ +C R+G+VY TL+ R+T+T L A LD + + HYGA++GL
Sbjct: 308 AAFLLGIVCDRFGNVYYTLKPRVTRTALKAFLDNTKPYSTHYGAIKGL 355
Score = 355 (130.0 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 66/134 (49%), Positives = 94/134 (70%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++ +A+ +GI N + + A A+A D+EYRI +++QEA K M HS+RT LT+ D+ AL+
Sbjct: 9 ESIKDVAEMLGIGNLADEPAAAIAMDLEYRIHQVVQEATKFMVHSKRTVLTSADISSALR 68
Query: 67 LRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCH 123
NVEP+YGF + PL F A G L+YLDD++V+F+ +I APLP+ P + S H
Sbjct: 69 TLNVEPLYGFNNSRPLEFHEAAVGAGQNSLYYLDDEEVDFEKIINAPLPKVPRNISYSAH 128
Query: 124 WLAIEGVQPVIPEN 137
WLAIEGVQP IP+N
Sbjct: 129 WLAIEGVQPAIPQN 142
>UNIPROTKB|J9NS44 [details] [associations]
symbol:TAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006352
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 EMBL:AAEX03004275
RefSeq:XP_546964.2 Ensembl:ENSCAFT00000049298 GeneID:489846
KEGG:cfa:489846 Uniprot:J9NS44
Length = 678
Score = 387 (141.3 bits), Expect = 4.5e-73, Sum P(3) = 4.5e-73
Identities = 91/237 (38%), Positives = 141/237 (59%)
Query: 108 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA---APSNGTNNEQK-----DGLP 159
E P P AP + ++ +P E+ P++ A AP++G E+K +G P
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKAQGAAPADGKGKEKKAPPLLEGAP 205
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 206 LRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 264
Query: 220 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 276
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 277 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 333
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 381
Score = 352 (129.0 bits), Expect = 4.5e-73, Sum P(3) = 4.5e-73
Identities = 65/139 (46%), Positives = 96/139 (69%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP 139
HWL+IEG QP IPEN P
Sbjct: 132 KAHWLSIEGCQPAIPENPP 150
Score = 49 (22.3 bits), Expect = 4.5e-73, Sum P(3) = 4.5e-73
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 437 TDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQI----PPDSGS 484
T P A SS P+P+ A + D+ P+P + + PP S S
Sbjct: 622 TSHPSPAPPPSSAPSPLGGSALCGGKQEAGDSPPPAPGTPKANGSQPPGSSS 673
Score = 44 (20.5 bits), Expect = 1.5e-72, Sum P(3) = 1.5e-72
Identities = 18/66 (27%), Positives = 25/66 (37%)
Query: 430 PPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRSK 489
PP + G V S+P P E T + + P PSS P + K
Sbjct: 592 PPSTAPSGPGSVQKYIVVSLP-PTGEGKGGPT---SHPSPAPPPSSAPSPLGGSALCGGK 647
Query: 490 RDKGDS 495
++ GDS
Sbjct: 648 QEAGDS 653
Score = 41 (19.5 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 435 IATDGPVDAVSTSSMPTPMEEDATAAT-PLDNS----DADHPSPSSVQ--IPPDS-GSES 486
++ +G A+ + P P E+ AT PL ++ + D P Q P D G E
Sbjct: 136 LSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKAQGAAPADGKGKEK 195
Query: 487 RS 488
++
Sbjct: 196 KA 197
Score = 39 (18.8 bits), Expect = 5.0e-72, Sum P(3) = 5.0e-72
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 413 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 472
V TL + R + PP K I +S+SS + ++ + +T S + S
Sbjct: 517 VQTLVSARAAAPPQPSPPPTKFIV-------MSSSSSASSTQQVLSLSTSAPGSGSTTTS 569
Query: 473 PSSVQIP 479
P + +P
Sbjct: 570 PVTTTVP 576
>UNIPROTKB|E2RFB9 [details] [associations]
symbol:TAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0045786 "negative regulation of cell cycle" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737 GO:GO:0008285
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0071339
GO:GO:0045786 GO:GO:0051090 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00640000091486 OMA:QEETCQL EMBL:AAEX03004275
Ensembl:ENSCAFT00000023284 NextBio:20862962 Uniprot:E2RFB9
Length = 698
Score = 387 (141.3 bits), Expect = 6.4e-73, Sum P(3) = 6.4e-73
Identities = 91/237 (38%), Positives = 141/237 (59%)
Query: 108 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA---APSNGTNNEQK-----DGLP 159
E P P AP + ++ +P E+ P++ A AP++G E+K +G P
Sbjct: 167 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKAQGAAPADGKGKEKKAPPLLEGAP 225
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 226 LRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 284
Query: 220 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 276
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 285 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 344
Query: 277 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 333
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 345 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 401
Score = 352 (129.0 bits), Expect = 6.4e-73, Sum P(3) = 6.4e-73
Identities = 65/139 (46%), Positives = 96/139 (69%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 32 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 91
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 92 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 151
Query: 121 VCHWLAIEGVQPVIPENAP 139
HWL+IEG QP IPEN P
Sbjct: 152 KAHWLSIEGCQPAIPENPP 170
Score = 49 (22.3 bits), Expect = 6.4e-73, Sum P(3) = 6.4e-73
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 437 TDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQI----PPDSGS 484
T P A SS P+P+ A + D+ P+P + + PP S S
Sbjct: 642 TSHPSPAPPPSSAPSPLGGSALCGGKQEAGDSPPPAPGTPKANGSQPPGSSS 693
Score = 44 (20.5 bits), Expect = 2.2e-72, Sum P(3) = 2.2e-72
Identities = 18/66 (27%), Positives = 25/66 (37%)
Query: 430 PPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRSK 489
PP + G V S+P P E T + + P PSS P + K
Sbjct: 612 PPSTAPSGPGSVQKYIVVSLP-PTGEGKGGPT---SHPSPAPPPSSAPSPLGGSALCGGK 667
Query: 490 RDKGDS 495
++ GDS
Sbjct: 668 QEAGDS 673
Score = 41 (19.5 bits), Expect = 5.7e-30, Sum P(2) = 5.7e-30
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 435 IATDGPVDAVSTSSMPTPMEEDATAAT-PLDNS----DADHPSPSSVQ--IPPDS-GSES 486
++ +G A+ + P P E+ AT PL ++ + D P Q P D G E
Sbjct: 156 LSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKAQGAAPADGKGKEK 215
Query: 487 RS 488
++
Sbjct: 216 KA 217
Score = 39 (18.8 bits), Expect = 7.2e-72, Sum P(3) = 7.2e-72
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 413 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 472
V TL + R + PP K I +S+SS + ++ + +T S + S
Sbjct: 537 VQTLVSARAAAPPQPSPPPTKFIV-------MSSSSSASSTQQVLSLSTSAPGSGSTTTS 589
Query: 473 PSSVQIP 479
P + +P
Sbjct: 590 PVTTTVP 596
>UNIPROTKB|Q58DG7 [details] [associations]
symbol:TAF6 "TBP-associated factor 6 isoform alpha"
species:9913 "Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0045786 "negative regulation of cell cycle" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737 GO:GO:0008285
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0071339
GO:GO:0045786 GO:GO:0051090 GO:GO:0005669 GO:GO:0033276 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 HOGENOM:HOG000253001
HOVERGEN:HBG012489 OMA:QEETCQL EMBL:DAAA02058286 EMBL:BT021630
IPI:IPI00717822 RefSeq:NP_001015525.1 UniGene:Bt.13917
STRING:Q58DG7 Ensembl:ENSBTAT00000054282 GeneID:505638
KEGG:bta:505638 InParanoid:Q58DG7 NextBio:20867237 Uniprot:Q58DG7
Length = 678
Score = 387 (141.3 bits), Expect = 1.5e-72, Sum P(3) = 1.5e-72
Identities = 91/237 (38%), Positives = 141/237 (59%)
Query: 108 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK-----DGLP 159
E P P AP + ++ +P E+ P++ AAP++G E+K +G P
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPADGKGKEKKAPPLLEGAP 205
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 206 LRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 264
Query: 220 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 276
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 277 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 333
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 381
Score = 352 (129.0 bits), Expect = 1.5e-72, Sum P(3) = 1.5e-72
Identities = 65/139 (46%), Positives = 96/139 (69%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP 139
HWL+IEG QP IPEN P
Sbjct: 132 KAHWLSIEGCQPAIPENPP 150
Score = 44 (20.5 bits), Expect = 1.5e-72, Sum P(3) = 1.5e-72
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 447 SSMPTPMEEDATAATPLDNSDADHPSPSSVQIPP 480
+S P+P+ +A +PL S P + + PP
Sbjct: 622 ASHPSPVPTPTSAPSPLGGSALCGGKPEAGESPP 655
Score = 39 (18.8 bits), Expect = 5.0e-72, Sum P(3) = 5.0e-72
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 413 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 472
V TL + R + PP K I +S+SS + ++ + +T S + S
Sbjct: 517 VQTLVSTRAAAPPQPSPPPTKFIV-------MSSSSSASSTQQVLSLSTSAPGSGSTTTS 569
Query: 473 PSSVQIP 479
P + +P
Sbjct: 570 PVTTTVP 576
Score = 38 (18.4 bits), Expect = 9.8e-30, Sum P(2) = 9.8e-30
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 435 IATDGPVDAVSTSSMPTPMEEDATAAT-PLDNS----DADHPSPSSVQ--IPPDS-GSES 486
++ +G A+ + P P E+ AT PL ++ + D P Q P D G E
Sbjct: 136 LSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPADGKGKEK 195
Query: 487 RS 488
++
Sbjct: 196 KA 197
>RGD|1311608 [details] [associations]
symbol:Taf6 "TAF6 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008285 "negative regulation
of cell proliferation" evidence=IEA;ISO] [GO:0033276 "transcription
factor TFTC complex" evidence=IEA;ISO] [GO:0045786 "negative
regulation of cell cycle" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 RGD:1311608 GO:GO:0005737
GO:GO:0008285 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677
GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367
GO:GO:0071339 GO:GO:0045786 GO:GO:0051090 GO:GO:0005669
GO:GO:0033276 eggNOG:COG5095 GeneTree:ENSGT00640000091486
HOGENOM:HOG000253001 HOVERGEN:HBG012489 OrthoDB:EOG4MKNG0
OMA:QEETCQL EMBL:D49446 IPI:IPI00212680 UniGene:Rn.102447
ProteinModelPortal:Q63801 STRING:Q63801 PhosphoSite:Q63801
PRIDE:Q63801 Ensembl:ENSRNOT00000001829 UCSC:RGD:1311608
InParanoid:Q63801 Genevestigator:Q63801
GermOnline:ENSRNOG00000001355 Uniprot:Q63801
Length = 678
Score = 377 (137.8 bits), Expect = 8.9e-69, Sum P(3) = 8.9e-69
Identities = 90/237 (37%), Positives = 139/237 (58%)
Query: 108 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK-----DGLP 159
E P P AP + ++ +P E+ P++ AA ++G E+K +G P
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGKGKEKKAPPLLEGAP 205
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
+K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 206 FRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 264
Query: 220 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 276
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 277 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 333
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 381
Score = 352 (129.0 bits), Expect = 8.9e-69, Sum P(3) = 8.9e-69
Identities = 65/139 (46%), Positives = 96/139 (69%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP 139
HWL+IEG QP IPEN P
Sbjct: 132 KAHWLSIEGCQPAIPENPP 150
Score = 46 (21.3 bits), Expect = 8.9e-69, Sum P(3) = 8.9e-69
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 440 PVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSE 485
P +SS P+P+ A + D+ P+P + P +GS+
Sbjct: 625 PSPVPPSSSSPSPLGGSALCGGKQETGDSPPPAPGT---PKANGSQ 667
Score = 41 (19.5 bits), Expect = 3.0e-68, Sum P(3) = 3.0e-68
Identities = 12/58 (20%), Positives = 22/58 (37%)
Query: 429 QPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSES 486
QP +K ++T + + P +++ + P P +PP S S S
Sbjct: 579 QPIVKLVSTATTAPPSTAPAGPGSVQKYIVVSLPPTGEGKGGPPSHPSPVPPSSSSPS 636
Score = 39 (18.8 bits), Expect = 4.8e-68, Sum P(3) = 4.8e-68
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 413 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 472
V TL + R + PP K I +S+SS + ++ + +T S + S
Sbjct: 517 VQTLVSARAAAPPQPSPPPTKFIV-------MSSSSSASSTQQVLSLSTSAPGSGSTTTS 569
Query: 473 PSSVQIP 479
P + +P
Sbjct: 570 PVTTTVP 576
Score = 37 (18.1 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 435 IATDGPVDAVSTSSMPTPMEEDATAAT-PLDNS 466
++ +G A+ + P P E+ AT PL ++
Sbjct: 136 LSIEGCQPAIPENPPPAPKEQQKAEATEPLKSA 168
>ZFIN|ZDB-GENE-040912-23 [details] [associations]
symbol:taf6 "TAF6 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
ZFIN:ZDB-GENE-040912-23 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 KO:K03131 GeneTree:ENSGT00640000091486 CTD:6878
HOGENOM:HOG000253001 HOVERGEN:HBG012489 EMBL:BX927335
EMBL:CABZ01016379 EMBL:CR847545 EMBL:BC081612 IPI:IPI00491415
RefSeq:NP_001004557.1 UniGene:Dr.36557 STRING:Q66HZ5
Ensembl:ENSDART00000042901 GeneID:447818 KEGG:dre:447818
InParanoid:Q66HZ5 NextBio:20832342 Uniprot:Q66HZ5
Length = 636
Score = 375 (137.1 bits), Expect = 1.9e-68, Sum P(2) = 1.9e-68
Identities = 69/138 (50%), Positives = 99/138 (71%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
I+P ++++ +A+S+GI + D+ L L+ +V YRI+EI Q+A+K M H +R LTT D+D
Sbjct: 13 ILPTDSMKAMAESVGIGSLQEDSCLTLSEEVSYRIKEIAQDALKFMHHGKRCKLTTGDID 72
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
ALKL+NVEP+YGF S + FR A G R+L + ++K+V+ D+I PLPR PLD S+
Sbjct: 73 HALKLKNVEPLYGFQSEEFIPFRFASGGGRELHFYEEKEVDLSDIINTPLPRVPLDVSLK 132
Query: 122 CHWLAIEGVQPVIPENAP 139
HWL+I+GVQP IPEN P
Sbjct: 133 AHWLSIDGVQPAIPENPP 150
Score = 369 (135.0 bits), Expect = 1.9e-68, Sum P(2) = 1.9e-68
Identities = 85/210 (40%), Positives = 126/210 (60%)
Query: 127 IEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAV 186
++ V+P + +QA + + E K + +K H LS E QLY+ +ITE V
Sbjct: 165 LKAVKPGQEDEGFIQAKG--QSAVSAEVKGKEKMRMKPRSTHELSVEQQLYYKEITEACV 222
Query: 187 SRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQ 244
++ +AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+
Sbjct: 223 GSCEAKR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMD 281
Query: 245 NPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTL 303
NP + +E YLH+L+P+VVTC+V+K+L R DNHW LRDF A+L+A CK + N +
Sbjct: 282 NPTLYLEKYLHELIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNI 341
Query: 304 QTRLTKTLLNALLDPKRALTQHYGAVQGLA 333
Q+R+TKT ALLD K T YG + GLA
Sbjct: 342 QSRITKTFTKALLDEKTQWTTRYGCIAGLA 371
>UNIPROTKB|P49848 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0045786 "negative regulation of cell cycle"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=NAS;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IDA;TAS] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] Reactome:REACT_71
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737
Reactome:REACT_116125 GO:GO:0008285 GO:GO:0016032 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:CH236956 EMBL:CH471091 GO:GO:0006368
GO:GO:0006367 GO:GO:0071339 GO:GO:0045786 GO:GO:0051090
Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276 eggNOG:COG5095
KO:K03131 CTD:6878 EMBL:L25444 EMBL:U31659 EMBL:AK300005
EMBL:CR627390 EMBL:AY149894 EMBL:BC018115 IPI:IPI00028579
IPI:IPI00376952 IPI:IPI00924712 RefSeq:NP_001177344.1
RefSeq:NP_005632.1 RefSeq:NP_647476.1 UniGene:Hs.489309
ProteinModelPortal:P49848 SMR:P49848 DIP:DIP-29288N DIP:DIP-773N
IntAct:P49848 MINT:MINT-1211769 STRING:P49848 PhosphoSite:P49848
DMDM:1729810 PaxDb:P49848 PRIDE:P49848 DNASU:6878
Ensembl:ENST00000344095 Ensembl:ENST00000437822
Ensembl:ENST00000452041 Ensembl:ENST00000453269 GeneID:6878
KEGG:hsa:6878 UCSC:uc003uti.3 GeneCards:GC07M099704 HGNC:HGNC:11540
HPA:HPA006566 MIM:602955 neXtProt:NX_P49848 PharmGKB:PA36315
HOGENOM:HOG000253001 HOVERGEN:HBG012489 InParanoid:P49848
OrthoDB:EOG4MKNG0 PhylomeDB:P49848 GenomeRNAi:6878 NextBio:26859
ArrayExpress:P49848 Bgee:P49848 CleanEx:HS_TAF6
Genevestigator:P49848 GermOnline:ENSG00000106290 Uniprot:P49848
Length = 677
Score = 375 (137.1 bits), Expect = 2.8e-68, Sum P(3) = 2.8e-68
Identities = 89/237 (37%), Positives = 139/237 (58%)
Query: 108 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK-----DGLP 159
E P P AP + ++ +P E+ P++ A ++G E+K +G P
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAP 205
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 206 LRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 264
Query: 220 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 276
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 277 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 333
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 381
Score = 352 (129.0 bits), Expect = 2.8e-68, Sum P(3) = 2.8e-68
Identities = 65/139 (46%), Positives = 96/139 (69%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP 139
HWL+IEG QP IPEN P
Sbjct: 132 KAHWLSIEGCQPAIPENPP 150
Score = 47 (21.6 bits), Expect = 2.8e-68, Sum P(3) = 2.8e-68
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 437 TDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRS 488
T P +S P+P+ A + D+ P+P + P +GS+ S
Sbjct: 622 TSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGT---PKANGSQPNS 670
Score = 42 (19.8 bits), Expect = 9.2e-68, Sum P(3) = 9.2e-68
Identities = 12/58 (20%), Positives = 23/58 (39%)
Query: 429 QPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSES 486
QP +K ++T + S P +++ + P P+ +PP + S S
Sbjct: 579 QPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPS 636
Score = 39 (18.8 bits), Expect = 1.9e-67, Sum P(3) = 1.9e-67
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 413 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 472
V TL + R + PP K I S+SS P+ ++ + +T S + S
Sbjct: 517 VQTLVSARAAAPPQPSPPPTKFIVMS------SSSSAPST-QQVLSLSTSAPGSGSTTTS 569
Query: 473 PSSVQIP 479
P + +P
Sbjct: 570 PVTTTVP 576
Score = 37 (18.1 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 435 IATDGPVDAVSTSSMPTPMEEDATAAT-PLDNS 466
++ +G A+ + P P E+ AT PL ++
Sbjct: 136 LSIEGCQPAIPENPPPAPKEQQKAEATEPLKSA 168
>MGI|MGI:109129 [details] [associations]
symbol:Taf6 "TAF6 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10090 "Mus musculus" [GO:0003677
"DNA binding" evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005669 "transcription factor TFIID complex" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 MGI:MGI:109129
GO:GO:0005737 GO:GO:0008285 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0006367 GO:GO:0071339 GO:GO:0045786 GO:GO:0051090
GO:GO:0005669 GO:GO:0033276 eggNOG:COG5095 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 HOGENOM:HOG000253001
HOVERGEN:HBG012489 OrthoDB:EOG4MKNG0 EMBL:D49439 EMBL:BC058583
IPI:IPI00124566 PIR:JC4245 RefSeq:NP_033341.1 UniGene:Mm.248517
ProteinModelPortal:Q62311 SMR:Q62311 DIP:DIP-493N IntAct:Q62311
MINT:MINT-269059 STRING:Q62311 PhosphoSite:Q62311 PaxDb:Q62311
PRIDE:Q62311 Ensembl:ENSMUST00000048698 Ensembl:ENSMUST00000110936
GeneID:21343 KEGG:mmu:21343 UCSC:uc009aew.1 InParanoid:Q62311
OMA:QEETCQL NextBio:300524 Bgee:Q62311 Genevestigator:Q62311
GermOnline:ENSMUSG00000036980 Uniprot:Q62311
Length = 678
Score = 377 (137.8 bits), Expect = 3.8e-68, Sum P(3) = 3.8e-68
Identities = 90/237 (37%), Positives = 139/237 (58%)
Query: 108 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK-----DGLP 159
E P P AP + ++ +P E+ P++ AA ++G E+K +G P
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGKGKEKKAPPLLEGAP 205
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
+K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 206 FRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 264
Query: 220 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 276
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 277 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 333
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 381
Score = 352 (129.0 bits), Expect = 3.8e-68, Sum P(3) = 3.8e-68
Identities = 65/139 (46%), Positives = 96/139 (69%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP 139
HWL+IEG QP IPEN P
Sbjct: 132 KAHWLSIEGCQPAIPENPP 150
Score = 40 (19.1 bits), Expect = 3.8e-68, Sum P(3) = 3.8e-68
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 440 PVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSE 485
P +SS P+P+ + D+ P+P + P +GS+
Sbjct: 625 PSPVPPSSSSPSPLGGSTLCGGKQEAGDSPPPAPGT---PKANGSQ 667
Score = 39 (18.8 bits), Expect = 4.8e-68, Sum P(3) = 4.8e-68
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 413 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 472
V TL + R + PP K I +S+SS + ++ + +T S + S
Sbjct: 517 VQTLVSARAAAPPQPSPPPTKFIV-------MSSSSSASSTQQVLSLSTSAPGSGSTTTS 569
Query: 473 PSSVQIP 479
P + +P
Sbjct: 570 PVTTTVP 576
Score = 37 (18.1 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 435 IATDGPVDAVSTSSMPTPMEEDATAAT-PLDNS 466
++ +G A+ + P P E+ AT PL ++
Sbjct: 136 LSIEGCQPAIPENPPPAPKEQQKAEATEPLKSA 168
>UNIPROTKB|J3KR72 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051090 "regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0051090 EMBL:AC073842 HGNC:HGNC:11540
OMA:QEETCQL ProteinModelPortal:J3KR72 Ensembl:ENST00000472509
Uniprot:J3KR72
Length = 734
Score = 375 (137.1 bits), Expect = 6.6e-68, Sum P(3) = 6.6e-68
Identities = 89/237 (37%), Positives = 139/237 (58%)
Query: 108 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK-----DGLP 159
E P P AP + ++ +P E+ P++ A ++G E+K +G P
Sbjct: 204 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAP 262
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 263 LRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 321
Query: 220 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 276
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 322 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 381
Query: 277 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 333
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 382 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 438
Score = 352 (129.0 bits), Expect = 6.6e-68, Sum P(3) = 6.6e-68
Identities = 65/139 (46%), Positives = 96/139 (69%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 69 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 128
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 129 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 188
Query: 121 VCHWLAIEGVQPVIPENAP 139
HWL+IEG QP IPEN P
Sbjct: 189 KAHWLSIEGCQPAIPENPP 207
Score = 47 (21.6 bits), Expect = 6.6e-68, Sum P(3) = 6.6e-68
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 437 TDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRS 488
T P +S P+P+ A + D+ P+P + P +GS+ S
Sbjct: 679 TSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGT---PKANGSQPNS 727
Score = 42 (19.8 bits), Expect = 2.2e-67, Sum P(3) = 2.2e-67
Identities = 12/58 (20%), Positives = 23/58 (39%)
Query: 429 QPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSES 486
QP +K ++T + S P +++ + P P+ +PP + S S
Sbjct: 636 QPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPS 693
Score = 39 (18.8 bits), Expect = 4.5e-67, Sum P(3) = 4.5e-67
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 413 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 472
V TL + R + PP K I S+SS P+ ++ + +T S + S
Sbjct: 574 VQTLVSARAAAPPQPSPPPTKFIVMS------SSSSAPST-QQVLSLSTSAPGSGSTTTS 626
Query: 473 PSSVQIP 479
P + +P
Sbjct: 627 PVTTTVP 633
Score = 37 (18.1 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 435 IATDGPVDAVSTSSMPTPMEEDATAAT-PLDNS 466
++ +G A+ + P P E+ AT PL ++
Sbjct: 193 LSIEGCQPAIPENPPPAPKEQQKAEATEPLKSA 225
>ASPGD|ASPL0000017134 [details] [associations]
symbol:AN8232 species:162425 "Emericella nidulans"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 EMBL:BN001302 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0003743 GO:GO:0051090 EMBL:AACD01000144
eggNOG:COG5095 KO:K03131 HOGENOM:HOG000159894 OMA:EPLYGYD
OrthoDB:EOG45XC4M RefSeq:XP_681501.1 ProteinModelPortal:Q5ATZ8
STRING:Q5ATZ8 EnsemblFungi:CADANIAT00004284 GeneID:2869223
KEGG:ani:AN8232.2 Uniprot:Q5ATZ8
Length = 445
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 143/346 (41%), Positives = 213/346 (61%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI N + D LA DVEYRI ++++EA+K MRHSRRT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGIVNLNNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ AL++ +VEP+YG+ + PL+F A +G + LFY++D++V+F+ +I APLPR P +
Sbjct: 61 IALALRVLDVEPLYGYETTRPLKFGEASLGPGQPLFYVEDEEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
S HWLA+EGVQP IP+N A + + S G N N + V +K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPTAADSRNLELMSKGPNANATLAAMSGNGNVAVKPLVKHVL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + S SL D GLH LVPYF F++++V+ GL +
Sbjct: 181 SKELQLYFEKVCNAFLDESSEKYRTSGYASLREDPGLHQLVPYFVQFISEKVTHGLKDIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD--NHWELRDFTAKL 288
+L +M + L+QN + ++PY+ L+P ++TCL+ ++LG AD + LRD A L
Sbjct: 241 VLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGT-ADLSEQFALRDLAAAL 299
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
+ I +Y H +TL+ RL ++ L LLDP + HYGA+ GL A
Sbjct: 300 LGLIATKYSHSSHTLKPRLARSCLKTLLDPSKPFGAHYGAIIGLHA 345
>UNIPROTKB|Q91857 [details] [associations]
symbol:taf6 "Transcription initiation factor TFIID subunit
6" species:8355 "Xenopus laevis" [GO:0071339 "MLL1 complex"
evidence=ISS] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0071339
GO:GO:0051090 KO:K03131 CTD:6878 HOVERGEN:HBG012489 EMBL:D50054
EMBL:BC068776 PIR:JC4366 RefSeq:NP_001081232.1 UniGene:Xl.3836
ProteinModelPortal:Q91857 GeneID:397724 KEGG:xla:397724
Xenbase:XB-GENE-5774722 Uniprot:Q91857
Length = 618
Score = 367 (134.2 bits), Expect = 1.0e-65, Sum P(2) = 1.0e-65
Identities = 79/192 (41%), Positives = 121/192 (63%)
Query: 149 GTNNEQK----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATD 204
G E+K +G P+++K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 184 GKGKEKKTAILEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATD 242
Query: 205 SGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVV 262
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E YLH+L+P+V+
Sbjct: 243 PGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVM 302
Query: 263 TCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 321
TC+V+++L R DNHW LRDF A+L+A ICK + N +Q+R+TKT +D +
Sbjct: 303 TCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTKTWVDDRTP 362
Query: 322 LTQHYGAVQGLA 333
T YG++ GLA
Sbjct: 363 WTTRYGSIAGLA 374
Score = 356 (130.4 bits), Expect = 1.0e-65, Sum P(2) = 1.0e-65
Identities = 67/139 (48%), Positives = 96/139 (69%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++VI++S+GIS S + LA +V +RI+E+ Q+A+K M +R LT D+
Sbjct: 10 TLLPSESMKVISESVGISQMSEETCQLLAQEVSFRIKEVTQDALKFMHVGKRQKLTPSDI 69
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF L FR A G R+L + ++K+ + D+I PLPR PLD S+
Sbjct: 70 DAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETDLSDIISTPLPRVPLDVSL 129
Query: 121 VCHWLAIEGVQPVIPENAP 139
HWL+IEGVQP IPEN P
Sbjct: 130 KAHWLSIEGVQPAIPENPP 148
Score = 42 (19.8 bits), Expect = 5.1e-31, Sum P(2) = 5.1e-31
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 435 IATDGPVDAVSTSSMPTPMEEDATAAT-PL 463
++ +G A+ + P P E+ T AT PL
Sbjct: 134 LSIEGVQPAIPENPPPVPKEQQKTEATEPL 163
>SGD|S000003080 [details] [associations]
symbol:TAF6 "Subunit (60 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0046695
"SLIK (SAGA-like) complex" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0001075 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity involved in preinitiation complex assembly" evidence=IC]
[GO:0000124 "SAGA complex" evidence=IDA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0016568
"chromatin modification" evidence=IDA] [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IDA;IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0032947 "protein complex scaffold" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
SGD:S000003080 EMBL:BK006941 GO:GO:0016573 GO:GO:0003682
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0046695
GO:GO:0032947 GO:GO:0051090 GO:GO:0001102 EMBL:X97644 GO:GO:0005669
GO:GO:0051123 EMBL:Z72634 eggNOG:COG5095 KO:K03131
GeneTree:ENSGT00640000091486 HOGENOM:HOG000159894 OrthoDB:EOG45XC4M
EMBL:L40145 EMBL:AY723809 PIR:S64120 RefSeq:NP_011403.1
ProteinModelPortal:P53040 SMR:P53040 DIP:DIP-981N IntAct:P53040
MINT:MINT-405577 STRING:P53040 PaxDb:P53040 PeptideAtlas:P53040
EnsemblFungi:YGL112C GeneID:852766 KEGG:sce:YGL112C CYGD:YGL112c
OMA:LEMIYSL NextBio:972224 Genevestigator:P53040 GermOnline:YGL112C
Uniprot:P53040
Length = 516
Score = 364 (133.2 bits), Expect = 2.4e-63, Sum P(2) = 2.4e-63
Identities = 79/195 (40%), Positives = 123/195 (63%)
Query: 155 KDGLPVEIKLPVKHILSRELQLYFDKI--TELAVSRSDSVL--FKQA-LVSLATDSGLHP 209
K G E+K VKH+LS+ELQ+YF+K+ T A S++D KQA L SL TDSGLH
Sbjct: 204 KPGQNTEVKPLVKHVLSKELQIYFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQ 263
Query: 210 LVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKR 269
LVPYF F+A+++++ L++ LL ++ ++++LL N I ++PY+H LMPS++T L+AK+
Sbjct: 264 LVPYFIQFIAEQITQNLSDLQLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKK 323
Query: 270 LGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 318
LG D+ + LRDF A L+ + K++ Y +L+ R+T+TLL LD
Sbjct: 324 LGGSPKDDSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDI 383
Query: 319 KRALTQHYGAVQGLA 333
R +YG ++G++
Sbjct: 384 NRVFGTYYGCLKGVS 398
Score = 324 (119.1 bits), Expect = 2.4e-63, Sum P(2) = 2.4e-63
Identities = 63/139 (45%), Positives = 95/139 (68%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A+S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +A
Sbjct: 13 PQDTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKA 72
Query: 65 LKLRNVEPVYGFASGGPLR----FRRA--IGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G + F + G + ++YLD+++V+F +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLP 132
Query: 119 SIVCHWLAIEGVQPVIPEN 137
+ HWLA+EGVQP I +N
Sbjct: 133 TFTTHWLAVEGVQPAIIQN 151
>FB|FBgn0010417 [details] [associations]
symbol:Taf6 "TBP-associated factor 6" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000124 "SAGA complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
EMBL:AE014296 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0022008
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 GO:GO:0005669
GO:GO:0051123 eggNOG:COG5095 KO:K03131 GeneTree:ENSGT00640000091486
EMBL:AY051702 EMBL:U06459 EMBL:L25443 RefSeq:NP_524161.2
UniGene:Dm.2802 PDB:1TAF PDBsum:1TAF ProteinModelPortal:P49847
SMR:P49847 DIP:DIP-772N DIP:DIP-778N IntAct:P49847 MINT:MINT-755268
STRING:P49847 PaxDb:P49847 EnsemblMetazoa:FBtr0074941 GeneID:40134
KEGG:dme:Dmel_CG32211 CTD:6878 FlyBase:FBgn0010417
InParanoid:P49847 OMA:KQLATHE OrthoDB:EOG434TN9 PhylomeDB:P49847
EvolutionaryTrace:P49847 GenomeRNAi:40134 NextBio:817166
Bgee:P49847 GermOnline:CG32211 Uniprot:P49847
Length = 606
Score = 379 (138.5 bits), Expect = 7.3e-63, Sum P(2) = 7.3e-63
Identities = 88/212 (41%), Positives = 129/212 (60%)
Query: 127 IEGVQPVIPENAPVQAIAA--PSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITEL 184
++ V PVI + + AA P+ G ++ K+ + +K H LS E QLY+ +ITE
Sbjct: 166 LDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEA 225
Query: 185 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNL 242
V SD +AL SL +D GLH ++P F+A+ V + NN +LL LMR+V L
Sbjct: 226 CVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRAL 284
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-DNHWELRDFTAKLVAAICKRYGHVYN 301
L NP + +E YLH+L+PSV+TC+V+K+L R DNHW LRDF ++L+A ICK + + N
Sbjct: 285 LDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTN 344
Query: 302 TLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 333
LQTR+T+ AL + K L+ YG++ GL+
Sbjct: 345 NLQTRVTRIFSKALQNDKTHLSSLYGSIAGLS 376
Score = 305 (112.4 bits), Expect = 7.3e-63, Sum P(2) = 7.3e-63
Identities = 58/139 (41%), Positives = 91/139 (65%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S + E+++VIA+SIG+ + S DAA LA DV +++ I+Q+A K M H++R L+ D+
Sbjct: 19 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDI 78
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D +LK+RNVEP YGF + + FR A G R+L + +DK+++ ++ + PLD ++
Sbjct: 79 DMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLDLTL 138
Query: 121 VCHWLAIEGVQPVIPENAP 139
HW +EGVQP +PEN P
Sbjct: 139 RSHWFVVEGVQPTVPENPP 157
>CGD|CAL0005584 [details] [associations]
symbol:TAF60 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0000124 "SAGA
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
InterPro:IPR016024 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
CGD:CAL0005584 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0035690 EMBL:AACQ01000074 GO:GO:0051090 eggNOG:COG5095
KO:K03131 HOGENOM:HOG000159894 RefSeq:XP_716115.1
ProteinModelPortal:Q5A2V7 STRING:Q5A2V7 GeneID:3642252
KEGG:cal:CaO19.7454 Uniprot:Q5A2V7
Length = 519
Score = 359 (131.4 bits), Expect = 1.3e-62, Sum P(2) = 1.3e-62
Identities = 79/201 (39%), Positives = 123/201 (61%)
Query: 147 SNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV--LFKQALVSLATD 204
+N +N++ +EIK +KH+LS+EL+LYFDK+ ++ +S L AL SL +D
Sbjct: 206 NNSNSNKKSTEKDMEIKPLIKHVLSKELKLYFDKVVDVLISTDPEKEHLKNAALTSLKSD 265
Query: 205 SGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTC 264
GLH LVPYF F+A++++ L N +L ++ V+ L+ N I ++PY+H LMP ++T
Sbjct: 266 PGLHQLVPYFIQFIAEQITNQLRNIEILSTMLEVISALVDNKTIFLDPYVHALMPCILTL 325
Query: 265 LVAKRLGN--RLADNH---WE--------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTL 311
L+AKR+G +L + W+ +R+F A L+ I K YG Y+TL+ R+T+TL
Sbjct: 326 LLAKRIGPVIKLTQENKEEWQDALKSQLAIREFAAILLQHIIKVYGSSYSTLRPRITRTL 385
Query: 312 LNALLDPKRALTQHYGAVQGL 332
L ALLD + + YGA+ GL
Sbjct: 386 LRALLDSTKPVGTQYGALLGL 406
Score = 327 (120.2 bits), Expect = 1.3e-62, Sum P(2) = 1.3e-62
Identities = 63/147 (42%), Positives = 97/147 (65%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV A S+G++ S + A +LA DVEY I EI++ A+K MRHS+R LTT DV A
Sbjct: 14 PYDTVRDAADSLGVT-ISDETAKSLAMDVEYHIHEIIETAVKFMRHSKRRQLTTSDVSNA 72
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ N+EP+YG+ + PL ++ + G + L+Y+D+ ++EF+ +I LP+ P +
Sbjct: 73 LKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFEKLINQQLPKVPRQVNFT 132
Query: 122 CHWLAIEGVQPVIPENA-PVQAIAAPS 147
HWLAIEGVQP++P+N P + + P+
Sbjct: 133 AHWLAIEGVQPMVPQNPLPSEIKSLPA 159
Score = 45 (20.9 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 417 SNKRKTSMDLEEQPPLKKI 435
SNK+ T D+E +P +K +
Sbjct: 210 SNKKSTEKDMEIKPLIKHV 228
>UNIPROTKB|Q5A2V7 [details] [associations]
symbol:TAF6 "Putative uncharacterized protein TAF6"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 InterPro:IPR016024
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 CGD:CAL0005584
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0035690
EMBL:AACQ01000074 GO:GO:0051090 eggNOG:COG5095 KO:K03131
HOGENOM:HOG000159894 RefSeq:XP_716115.1 ProteinModelPortal:Q5A2V7
STRING:Q5A2V7 GeneID:3642252 KEGG:cal:CaO19.7454 Uniprot:Q5A2V7
Length = 519
Score = 359 (131.4 bits), Expect = 1.3e-62, Sum P(2) = 1.3e-62
Identities = 79/201 (39%), Positives = 123/201 (61%)
Query: 147 SNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV--LFKQALVSLATD 204
+N +N++ +EIK +KH+LS+EL+LYFDK+ ++ +S L AL SL +D
Sbjct: 206 NNSNSNKKSTEKDMEIKPLIKHVLSKELKLYFDKVVDVLISTDPEKEHLKNAALTSLKSD 265
Query: 205 SGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTC 264
GLH LVPYF F+A++++ L N +L ++ V+ L+ N I ++PY+H LMP ++T
Sbjct: 266 PGLHQLVPYFIQFIAEQITNQLRNIEILSTMLEVISALVDNKTIFLDPYVHALMPCILTL 325
Query: 265 LVAKRLGN--RLADNH---WE--------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTL 311
L+AKR+G +L + W+ +R+F A L+ I K YG Y+TL+ R+T+TL
Sbjct: 326 LLAKRIGPVIKLTQENKEEWQDALKSQLAIREFAAILLQHIIKVYGSSYSTLRPRITRTL 385
Query: 312 LNALLDPKRALTQHYGAVQGL 332
L ALLD + + YGA+ GL
Sbjct: 386 LRALLDSTKPVGTQYGALLGL 406
Score = 327 (120.2 bits), Expect = 1.3e-62, Sum P(2) = 1.3e-62
Identities = 63/147 (42%), Positives = 97/147 (65%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV A S+G++ S + A +LA DVEY I EI++ A+K MRHS+R LTT DV A
Sbjct: 14 PYDTVRDAADSLGVT-ISDETAKSLAMDVEYHIHEIIETAVKFMRHSKRRQLTTSDVSNA 72
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ N+EP+YG+ + PL ++ + G + L+Y+D+ ++EF+ +I LP+ P +
Sbjct: 73 LKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFEKLINQQLPKVPRQVNFT 132
Query: 122 CHWLAIEGVQPVIPENA-PVQAIAAPS 147
HWLAIEGVQP++P+N P + + P+
Sbjct: 133 AHWLAIEGVQPMVPQNPLPSEIKSLPA 159
Score = 45 (20.9 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 417 SNKRKTSMDLEEQPPLKKI 435
SNK+ T D+E +P +K +
Sbjct: 210 SNKKSTEKDMEIKPLIKHV 228
>UNIPROTKB|G8JLM6 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR011442 Pfam:PF07571
GO:GO:0005634 GO:GO:0005737 GO:GO:0051090 EMBL:AC073842
HGNC:HGNC:11540 ProteinModelPortal:G8JLM6 SMR:G8JLM6
Ensembl:ENST00000418432 Bgee:G8JLM6 Uniprot:G8JLM6
Length = 601
Score = 378 (138.1 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 96/274 (35%), Positives = 154/274 (56%)
Query: 74 YGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLP---RAPLDTSIVCHWLAIEGV 130
+ FASGG R + + + +D D+ + PL +AP + ++
Sbjct: 37 FRFASGGG----RELYFYEEKEVDLSDIINTPLPRVPLDVCLKAPKEQQKAEATEPLKSA 92
Query: 131 QPVIPENAPVQAI---AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKIT 182
+P E+ P++ A ++G E+K +G P+ +K H LS E QLY+ +IT
Sbjct: 93 KPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEIT 152
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVW 240
E V ++ +AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V
Sbjct: 153 EACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVK 211
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHV 299
L+ NP + +E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK +
Sbjct: 212 ALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTT 271
Query: 300 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 333
N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 272 TNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 305
Score = 211 (79.3 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 65/191 (34%), Positives = 100/191 (52%)
Query: 48 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 106
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 107 IEAPLPRAPLDTSIVC--HWLAIEGVQPVI---P---ENAPVQAI---AAPSNGTNNEQK 155
I PLPR PLD + E +P+ P E+ P++ A ++G E+K
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKK 120
Query: 156 DGLPVE-IKLPVKHILSREL---QLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLV 211
+E L +K EL Q + K A S +AL S+ATD GL+ ++
Sbjct: 121 APPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQML 180
Query: 212 PYFTYFVADEV 222
P F+ F+++ V
Sbjct: 181 PRFSTFISEGV 191
Score = 47 (21.6 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 437 TDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRS 488
T P +S P+P+ A + D+ P+P + P +GS+ S
Sbjct: 546 TSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGT---PKANGSQPNS 594
Score = 42 (19.8 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 12/58 (20%), Positives = 23/58 (39%)
Query: 429 QPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSES 486
QP +K ++T + S P +++ + P P+ +PP + S S
Sbjct: 503 QPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPS 560
Score = 39 (18.8 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 413 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 472
V TL + R + PP K I S+SS P+ ++ + +T S + S
Sbjct: 441 VQTLVSARAAAPPQPSPPPTKFIVMS------SSSSAPST-QQVLSLSTSAPGSGSTTTS 493
Query: 473 PSSVQIP 479
P + +P
Sbjct: 494 PVTTTVP 500
>UNIPROTKB|C9JTY6 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR004823
InterPro:IPR009072 Pfam:PF02969 SMART:SM00803 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 HOGENOM:HOG000253001
IPI:IPI01011696 ProteinModelPortal:C9JTY6 SMR:C9JTY6 STRING:C9JTY6
Ensembl:ENST00000493322 ArrayExpress:C9JTY6 Bgee:C9JTY6
Uniprot:C9JTY6
Length = 255
Score = 352 (129.0 bits), Expect = 3.5e-34, Sum P(2) = 3.5e-34
Identities = 65/139 (46%), Positives = 96/139 (69%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP 139
HWL+IEG QP IPEN P
Sbjct: 132 KAHWLSIEGCQPAIPENPP 150
Score = 37 (18.1 bits), Expect = 3.5e-34, Sum P(2) = 3.5e-34
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 435 IATDGPVDAVSTSSMPTPMEEDATAAT-PLDNS 466
++ +G A+ + P P E+ AT PL ++
Sbjct: 136 LSIEGCQPAIPENPPPAPKEQQKAEATEPLKSA 168
>ZFIN|ZDB-GENE-030131-6789 [details] [associations]
symbol:taf6l "TAF6-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
ZFIN:ZDB-GENE-030131-6789 GO:GO:0005634 GO:GO:0006352
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 CTD:10629 KO:K03131
OMA:MPQLTAN GeneTree:ENSGT00640000091486 EMBL:AL954709
IPI:IPI00901427 RefSeq:NP_001186651.1 UniGene:Dr.75265
Ensembl:ENSDART00000113120 GeneID:557363 KEGG:dre:557363
NextBio:20881960 Bgee:E7FEV1 Uniprot:E7FEV1
Length = 641
Score = 232 (86.7 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 81/296 (27%), Positives = 131/296 (44%)
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 229
LS +L Y+ +IT A+ D L K AL+ L ++S + L+PYF Y ++ V ++
Sbjct: 153 LSEDLLKYYQQITR-AILGEDPHLMKVALLDLQSNSKIAALLPYFVYVISG-VKSVSHDL 210
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAK 287
L L+ +V +L+QNP++ + Y+ L+ SV+ C++ N L D HW LRD+ A
Sbjct: 211 DQLNRLLHMVKSLVQNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLRDYAAL 269
Query: 288 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXXXXXXXX 347
L++ I +G + + L ++ +L L DP R L HYGAV GL A
Sbjct: 270 LLSHIFWTHGDLVSGLYHQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVERVLYPH 329
Query: 348 XXXXXXXXEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 407
+ + N + + +VYGA+L A + + ++K + S
Sbjct: 330 LPAYWANLQAVLDDYSVSNAQVKADGHKVYGAILVAVERLL--KMKALSLTLAAEGGSA- 386
Query: 408 KTNGIVATLSNKRKTSMDLEEQP-PLKKIATDGPVDAVSTSSMPTPMEEDATAATP 462
+G V R+ S L P PL + G + P EE + P
Sbjct: 387 ALSGSVTGAVGFRENSPGLSPPPEPLSEPPL-GIASHLQAGGAGCPWEEWTPVSLP 441
Score = 190 (71.9 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 45/145 (31%), Positives = 83/145 (57%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
VP+E+V+++A+S G+ S + A LA DV YR+RE Q + + MRH++R L+ +D +
Sbjct: 12 VPRESVKLMAESAGVE-LSEELAGLLAEDVCYRLREATQNSSQFMRHAKRRKLSVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ N E V G+ + L FR + +LFY++D+++ ++ A +P+ +T +
Sbjct: 71 ALRWSNTETVCGYGAQDALPFR-PLKEGELFYVEDREINLVELALATNIPKGCAETMVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPS 147
H ++G + P+ A+ + S
Sbjct: 130 HVSYLDGKGNLEPQGTVPTAVQSLS 154
Score = 51 (23.0 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 19/75 (25%), Positives = 34/75 (45%)
Query: 434 KIATDGPVDAVSTSSMPTPME---EDATAATPLDNSDADHPSPSSVQIPPDSGSESRSKR 490
+ +TD P+ + + P+E E ATAA L+++ +S+ I P R+
Sbjct: 458 RFSTDPPLAGAAPAGPSQPLEGRKETATAAPNLESTRKMPQLTASMNISPRQDGSPRT-- 515
Query: 491 DKGDSQAQKLSAILP 505
+ Q L+A +P
Sbjct: 516 ---EPQPPSLAATVP 527
Score = 42 (19.8 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 396 PPLSSLPARSVWKTNGIVATLSN--KRKTSMDLEEQPPL 432
PPL+SLP R+ ++ +S +R TS PL
Sbjct: 603 PPLTSLPPRAYAHKLPVIGRVSKPVRRWTSSHYSLHLPL 641
Score = 38 (18.4 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 416 LSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSS 475
+S ++ S E QPP G A S+SS + ++++ P +S
Sbjct: 505 ISPRQDGSPRTEPQPPSLAATVPGRSLARSSSSSSSVSRSRSSSSRPGRSSSQSRDIFPK 564
Query: 476 VQIP-PDSG 483
+ P P +G
Sbjct: 565 ARFPLPQAG 573
>UNIPROTKB|F1MDZ8 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 OMA:MPQLTAN
GeneTree:ENSGT00640000091486 EMBL:DAAA02063486 IPI:IPI00706361
Ensembl:ENSBTAT00000012482 ArrayExpress:F1MDZ8 Uniprot:F1MDZ8
Length = 665
Score = 242 (90.2 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 70/216 (32%), Positives = 105/216 (48%)
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 229
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V ++
Sbjct: 199 LTDDLLKYYQQVTR-AVLGDDPQLMKIALHDLQTNSKIAALLPYFVYVVSG-VKSVSHDL 256
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAK 287
L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A
Sbjct: 257 EQLHRLLQVARSLVRNPHLCLVPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAAL 315
Query: 288 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXXXXXXXX 347
L++ I YG + N L ++ +L L DP R L HYGAV GL A
Sbjct: 316 LLSHIFWTYGDLVNGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPH 375
Query: 348 XXXXXXXXEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
+ + N + + +VYGA+L A
Sbjct: 376 LSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 411
Score = 183 (69.5 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 43/143 (30%), Positives = 83/143 (58%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 58 IPRESVRLMAESTGLE-LSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 116
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 117 ALRWSSVEAVCGYGSQEVLPLRPA-REGELYFPEDREVNLVELALATNIPKGCAETALRV 175
Query: 123 HWLAIEGVQPVIPENAPVQAIAA 145
H ++G + P+ + A+++
Sbjct: 176 HVSYLDGKGNLAPQGSVPSAVSS 198
>MGI|MGI:2444957 [details] [associations]
symbol:Taf6l "TAF6-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
MGI:MGI:2444957 GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0051090 CTD:10629 eggNOG:COG5095
HOGENOM:HOG000059613 HOVERGEN:HBG061566 KO:K03131 OrthoDB:EOG498V0F
EMBL:AK077149 EMBL:BC028647 IPI:IPI00153596 IPI:IPI00405376
RefSeq:NP_001171269.1 RefSeq:NP_666204.2 UniGene:Mm.220886
ProteinModelPortal:Q8R2K4 SMR:Q8R2K4 IntAct:Q8R2K4 STRING:Q8R2K4
PhosphoSite:Q8R2K4 PRIDE:Q8R2K4 Ensembl:ENSMUST00000177056
GeneID:225895 KEGG:mmu:225895 UCSC:uc008gmx.2 UCSC:uc008gmy.2
GeneTree:ENSGT00640000091486 InParanoid:Q8R2K4 NextBio:377857
Bgee:Q8R2K4 Genevestigator:Q8R2K4 GermOnline:ENSMUSG00000003680
Uniprot:Q8R2K4
Length = 616
Score = 234 (87.4 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 61/167 (36%), Positives = 92/167 (55%)
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 229
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V ++
Sbjct: 153 LTDDLLKYYQQVTR-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDL 210
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAK 287
L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A
Sbjct: 211 EQLHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAAL 269
Query: 288 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
L++ I +G + + L ++ +L L DP R L HYGAV GL A
Sbjct: 270 LLSHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHA 316
Score = 189 (71.6 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 44/143 (30%), Positives = 83/143 (58%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGLE-LSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A DL++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPLRPA-REGDLYFPEDREVSLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAA 145
H ++G + P+ + A+++
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS 152
>UNIPROTKB|I3LPI1 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 OMA:MPQLTAN
GeneTree:ENSGT00640000091486 EMBL:FP312617
Ensembl:ENSSSCT00000022269 Uniprot:I3LPI1
Length = 624
Score = 233 (87.1 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 68/216 (31%), Positives = 105/216 (48%)
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 229
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V ++
Sbjct: 160 LTDDLLKYYQQVTR-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDL 217
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAK 287
L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A
Sbjct: 218 EQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAAL 276
Query: 288 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXXXXXXXX 347
L++ I +G + + L ++ +L L DP R L HYGAV GL A
Sbjct: 277 LLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPH 336
Query: 348 XXXXXXXXEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
+ + N + + +VYGA+L A
Sbjct: 337 LSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 372
Score = 189 (71.6 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 44/143 (30%), Positives = 83/143 (58%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 19 IPRESVRLMAESTGLE-LSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 77
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V D+ A +P+ +T++
Sbjct: 78 ALRWSSVEAVCGYGSQEALPLRPA-REGELYFPEDREVNLVDLALATNIPKGCAETAVRV 136
Query: 123 HWLAIEGVQPVIPENAPVQAIAA 145
H ++G + P+ + A+++
Sbjct: 137 HVSYLDGKGNLAPQGSVPSAVSS 159
>UNIPROTKB|E2QUN8 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 CTD:10629
KO:K03131 OMA:MPQLTAN GeneTree:ENSGT00640000091486
EMBL:AAEX03011662 RefSeq:XP_533259.2 Ensembl:ENSCAFT00000024787
GeneID:476051 KEGG:cfa:476051 Uniprot:E2QUN8
Length = 625
Score = 234 (87.4 bits), Expect = 5.7e-31, Sum P(2) = 5.7e-31
Identities = 70/236 (29%), Positives = 112/236 (47%)
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 229
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V ++
Sbjct: 160 LTDDLLKYYQQVTR-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDL 217
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAK 287
L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A
Sbjct: 218 EQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAAL 276
Query: 288 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXXXXXXXX 347
L++ I +G + + L ++ +L L DP R L HYGAV GL A
Sbjct: 277 LLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPH 336
Query: 348 XXXXXXXXEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPA 403
+ + N + + +VYGA+L A + + + + P P+
Sbjct: 337 LSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVAVERLLKMKAQAAEPNKGGPS 392
Score = 184 (69.8 bits), Expect = 5.7e-31, Sum P(2) = 5.7e-31
Identities = 43/143 (30%), Positives = 83/143 (58%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 19 IPRESVRLMAESTGLE-LSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 77
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 78 ALRWSSVEAVCGYGSQEVLPLRPA-REGELYFPEDREVNLVELALATNIPKGCAETAVRV 136
Query: 123 HWLAIEGVQPVIPENAPVQAIAA 145
H ++G + P+ + A+++
Sbjct: 137 HVSYLDGKGNLAPQGSVPSAVSS 159
>UNIPROTKB|Q9Y6J9 [details] [associations]
symbol:TAF6L "TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 6L"
species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA] [GO:0043966
"histone H3 acetylation" evidence=IDA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0003677 EMBL:CH471076
GO:GO:0006352 GO:GO:0006357 GO:GO:0006338 GO:GO:0003713
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 GO:GO:0043966
GO:GO:0000118 GO:GO:0030914 EMBL:AF069735 EMBL:AK314330
IPI:IPI00007957 RefSeq:NP_006464.1 UniGene:Hs.714400
ProteinModelPortal:Q9Y6J9 SMR:Q9Y6J9 IntAct:Q9Y6J9
MINT:MINT-1456123 STRING:Q9Y6J9 PhosphoSite:Q9Y6J9 DMDM:46577572
PaxDb:Q9Y6J9 PeptideAtlas:Q9Y6J9 PRIDE:Q9Y6J9
Ensembl:ENST00000294168 GeneID:10629 KEGG:hsa:10629 UCSC:uc001nvc.3
CTD:10629 GeneCards:GC11P062538 HGNC:HGNC:17305 MIM:602946
neXtProt:NX_Q9Y6J9 PharmGKB:PA38224 eggNOG:COG5095
HOGENOM:HOG000059613 HOVERGEN:HBG061566 InParanoid:Q9Y6J9 KO:K03131
OMA:MPQLTAN OrthoDB:EOG498V0F PhylomeDB:Q9Y6J9 ChiTaRS:TAF6L
GenomeRNAi:10629 NextBio:40385 ArrayExpress:Q9Y6J9 Bgee:Q9Y6J9
CleanEx:HS_TAF6L Genevestigator:Q9Y6J9 GermOnline:ENSG00000162227
Uniprot:Q9Y6J9
Length = 622
Score = 224 (83.9 bits), Expect = 6.1e-30, Sum P(2) = 6.1e-30
Identities = 68/216 (31%), Positives = 103/216 (47%)
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 229
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V ++
Sbjct: 153 LTDDLLKYYHQVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDL 210
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAK 287
L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD A
Sbjct: 211 EQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGAAL 269
Query: 288 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXXXXXXXX 347
L++ I +G + + L + +L L DP R L HYGAV GL A
Sbjct: 270 LLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPH 329
Query: 348 XXXXXXXXEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
+ + N + + +VYGA+L A
Sbjct: 330 LSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
Score = 185 (70.2 bits), Expect = 6.1e-30, Sum P(2) = 6.1e-30
Identities = 43/143 (30%), Positives = 83/143 (58%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGLE-LSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPA-REGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAA 145
H ++G + P+ + A+++
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS 152
>UNIPROTKB|E5RHA1 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00975576
ProteinModelPortal:E5RHA1 SMR:E5RHA1 Ensembl:ENST00000523306
ArrayExpress:E5RHA1 Bgee:E5RHA1 Uniprot:E5RHA1
Length = 141
Score = 290 (107.1 bits), Expect = 5.2e-25, P = 5.2e-25
Identities = 58/139 (41%), Positives = 88/139 (63%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L + +A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDE----------DALKFMHMGKRQKLTTSDI 61
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 62 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 121
Query: 121 VCHWLAIEGVQPVIPENAP 139
HWL+IEG QP IPEN P
Sbjct: 122 KAHWLSIEGCQPAIPENPP 140
>UNIPROTKB|C9JIS2 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00946556
ProteinModelPortal:C9JIS2 SMR:C9JIS2 STRING:C9JIS2
Ensembl:ENST00000449571 ArrayExpress:C9JIS2 Bgee:C9JIS2
Uniprot:C9JIS2
Length = 134
Score = 282 (104.3 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 53/123 (43%), Positives = 83/123 (67%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCH 123
H
Sbjct: 132 KAH 134
>UNIPROTKB|C9JFL8 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0005737 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 HOGENOM:HOG000159894
IPI:IPI00926118 ProteinModelPortal:C9JFL8 SMR:C9JFL8 STRING:C9JFL8
Ensembl:ENST00000440225 ArrayExpress:C9JFL8 Bgee:C9JFL8
Uniprot:C9JFL8
Length = 233
Score = 281 (104.0 bits), Expect = 5.2e-24, P = 5.2e-24
Identities = 78/222 (35%), Positives = 121/222 (54%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VC--HWLAIEGVQPVI---P---ENAPVQAI---AAPSNGTNNEQKDGLPVE-IKLPVKH 168
E +P+ P E+ P++ A ++G E+K +E L +K
Sbjct: 132 KAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKP 191
Query: 169 ILSREL---QLYFDKITELAVSRSDSVLFKQALVSLATDSGL 207
EL Q + K A S +AL S+ATD GL
Sbjct: 192 RSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGL 233
>RGD|1310123 [details] [associations]
symbol:Taf6l "TAF6-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0030914 "STAGA
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=ISO]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 RGD:1310123 GO:GO:0005634
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090
IPI:IPI00390765 Ensembl:ENSRNOT00000037327 UCSC:RGD:1310123
ArrayExpress:D4ABK5 Uniprot:D4ABK5
Length = 591
Score = 184 (69.8 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 43/143 (30%), Positives = 83/143 (58%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGLE-LSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEVLPLRPA-REGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAA 145
H ++G + P+ + A+++
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS 152
Score = 166 (63.5 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 40/105 (38%), Positives = 60/105 (57%)
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLV 289
L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L+
Sbjct: 188 LHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLL 246
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
+ I +G + + L ++ +L L DP R L HYGAV GL A
Sbjct: 247 SHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHA 291
>UNIPROTKB|C9J088 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00926538
ProteinModelPortal:C9J088 SMR:C9J088 STRING:C9J088
Ensembl:ENST00000452438 ArrayExpress:C9J088 Bgee:C9J088
Uniprot:C9J088
Length = 156
Score = 276 (102.2 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 52/120 (43%), Positives = 82/120 (68%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
>FB|FBgn0014342 [details] [associations]
symbol:mia "meiosis I arrest" species:7227 "Drosophila
melanogaster" [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007141 "male meiosis I" evidence=IMP] [GO:0048515 "spermatid
differentiation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0007286 "spermatid development"
evidence=TAS] [GO:0007126 "meiosis" evidence=TAS] [GO:0005669
"transcription factor TFIID complex" evidence=ISS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISS] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] InterPro:IPR011442 Pfam:PF07571 GO:GO:0005730
GO:GO:0007286 GO:GO:0001673 GO:GO:0006367 GO:GO:0010468
GO:GO:0051090 GO:GO:0007141 GO:GO:0005669 EMBL:AY752878
ProteinModelPortal:Q5UEC4 SMR:Q5UEC4 STRING:Q5UEC4 PRIDE:Q5UEC4
FlyBase:FBgn0014342 InParanoid:Q5UEC4 OrthoDB:EOG41G1KF
ArrayExpress:Q5UEC4 Bgee:Q5UEC4 Uniprot:Q5UEC4
Length = 593
Score = 275 (101.9 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 99/337 (29%), Positives = 166/337 (49%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P+ + S G+ + A L+ +V+ I ++ EA K MR R L +
Sbjct: 30 SLSPRSLSAIFFHSTGL-HLDDGVAQWLSINVKEDITNLLNEAGKYMRRIRDRRLQLSHI 88
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
A+++ + + Y F R + D + V K V EA + D +V
Sbjct: 89 QHAVRMHD-DLCYDI-------FFRLVHCDDCKMPPSQKV-LKTVREA-VTAEKKDELLV 138
Query: 122 CHWLAI-EGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
+ ++ E VQ +PE P ++ P T + + V +K ++ LS E Q +F+
Sbjct: 139 SYPESVQESVQESVPEPVPETSLEPPPMHTGWLKVE--QVLLKPSKRYPLSMEQQNFFEL 196
Query: 181 ITELAVSRSDS--VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALM 236
+TE V +S VL AL +++TD L L+P T F+AD V+ + N LL LM
Sbjct: 197 VTEACVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLYLM 253
Query: 237 RVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAICKR 295
R+V LL N + YLH L+P+V++CL+AK++ + +++HW LR+++ ++A I ++
Sbjct: 254 RMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHIVRQ 313
Query: 296 YGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGL 332
+ N + R+ ALL K+ LT +GAV GL
Sbjct: 314 FDAADNGILPRVIGVYNKALL--KKPLTTVFGAVIGL 348
>UNIPROTKB|C9J7C4 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00970799
ProteinModelPortal:C9J7C4 SMR:C9J7C4 STRING:C9J7C4
Ensembl:ENST00000451699 ArrayExpress:C9J7C4 Bgee:C9J7C4
Uniprot:C9J7C4
Length = 114
Score = 222 (83.2 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 43/102 (42%), Positives = 71/102 (69%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVE 102
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
>UNIPROTKB|F8WEJ7 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00925005
ProteinModelPortal:F8WEJ7 SMR:F8WEJ7 Ensembl:ENST00000421980
ArrayExpress:F8WEJ7 Bgee:F8WEJ7 Uniprot:F8WEJ7
Length = 114
Score = 217 (81.4 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 42/101 (41%), Positives = 70/101 (69%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDV 101
D ALKL+NVEP+YGF + + FR A G R+L++ ++K++
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEL 112
>UNIPROTKB|E5RKA5 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00983929
ProteinModelPortal:E5RKA5 SMR:E5RKA5 Ensembl:ENST00000520135
ArrayExpress:E5RKA5 Bgee:E5RKA5 Uniprot:E5RKA5
Length = 114
Score = 196 (74.1 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 42/113 (37%), Positives = 70/113 (61%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L + +A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDE----------DALKFMHMGKRQKLTTSDI 61
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPR 113
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR
Sbjct: 62 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPR 114
>WB|WBGene00021363 [details] [associations]
symbol:taf-6.2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR011442 Pfam:PF07571 GO:GO:0005634 GO:GO:0009792
GO:GO:0000003 GO:GO:0051090 eggNOG:COG5095
GeneTree:ENSGT00640000091486 EMBL:FO080976 RefSeq:NP_500397.1
ProteinModelPortal:Q965Y0 SMR:Q965Y0 STRING:Q965Y0 PaxDb:Q965Y0
EnsemblMetazoa:Y37E11AL.8 GeneID:177129 KEGG:cel:CELE_Y37E11AL.8
UCSC:Y37E11AL.8 CTD:177129 WormBase:Y37E11AL.8 HOGENOM:HOG000018550
InParanoid:Q965Y0 OMA:EMSRGRF NextBio:895468 Uniprot:Q965Y0
Length = 814
Score = 209 (78.6 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 71/268 (26%), Positives = 126/268 (47%)
Query: 18 ISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEP--VYG 75
+ + +T AA ++ +R I+Q A K R L DVD A + ++
Sbjct: 107 LGSLTTAAANSIGACTRLVLRTIIQNAKKSASRENRKRLVPSDVDIACGIAQIDYNLTCP 166
Query: 76 FASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIP 135
P R G + D K+++ R I HWL ++G+QP +P
Sbjct: 167 LLRPTPSSDRMYWGRKLTKEHYTIDANSKEMVSHE--RFCDSIMIKDHWLVVDGIQPCLP 224
Query: 136 ENA-PVQA---IAAPSNGTNNEQKDGLPVEIK---LPVKHI----LSRELQLYFDKITEL 184
EN P + + T G+P IK +P K + S E Q+ + +IT++
Sbjct: 225 ENVIPSEVKRRFQEQQHETQRAHGFGVP-GIKREPMPEKRMSTQTFSMEHQVLYSEITKI 283
Query: 185 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVWNL 242
S S S+ ++ L ++ TD+G+ L F +A+ + G N L L+++ W+L
Sbjct: 284 LTSGS-SLQRQKVLETIETDTGIQFLAGRFVILIAEGTRLHIGTRNIRGLANLLKLTWSL 342
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRL 270
++NP+I++E YL+ L+PS+++C+V+K +
Sbjct: 343 MKNPNIRLEKYLYVLVPSLISCVVSKNM 370
Score = 45 (20.9 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 279 WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 315
++LR+ + KL+A + +Y ++ L R+ +TL L
Sbjct: 414 FKLREASGKLLAELSSQYQNL--NLNVRIIQTLRGVL 448
>UNIPROTKB|E9PP94 [details] [associations]
symbol:TAF6L "TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 6L"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 EMBL:AP001160 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 HGNC:HGNC:17305 ChiTaRS:TAF6L IPI:IPI00983560
ProteinModelPortal:E9PP94 SMR:E9PP94 Ensembl:ENST00000529509
UCSC:uc009yof.3 ArrayExpress:E9PP94 Bgee:E9PP94 Uniprot:E9PP94
Length = 145
Score = 180 (68.4 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 42/136 (30%), Positives = 79/136 (58%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGLE-LSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPA-REGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENA 138
H ++G + P+ +
Sbjct: 130 HVSYLDGKGNLAPQGS 145
>WB|WBGene00006387 [details] [associations]
symbol:taf-6.1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 GO:GO:0051090
eggNOG:COG5095 KO:K03131 GeneTree:ENSGT00640000091486 EMBL:FO081732
RefSeq:NP_493919.1 ProteinModelPortal:Q9GZI6 SMR:Q9GZI6
IntAct:Q9GZI6 STRING:Q9GZI6 PaxDb:Q9GZI6 EnsemblMetazoa:W09B6.2
GeneID:173498 KEGG:cel:CELE_W09B6.2 UCSC:W09B6.2 CTD:173498
WormBase:W09B6.2 InParanoid:Q9GZI6 OMA:IIYAGRV NextBio:879913
Uniprot:Q9GZI6
Length = 470
Score = 165 (63.1 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 47/173 (27%), Positives = 86/173 (49%)
Query: 130 VQPVIPE-NAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK----HILSRELQLYFDKITEL 184
V +IPE N P + + + K ++ K+ +K IL+ E Q++ I +
Sbjct: 182 VMTMIPEKNTPSSSTTSSLQMFRDAVKTA-KIDQKVGLKPSTIEILTVEQQIFMKDIITV 240
Query: 185 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN--YSLLFALMRVVWNL 242
+ + D +AL +L TD+GL +P+ T + +S ++ SL+ RV+ +L
Sbjct: 241 CMGQDDKKRH-EALYTLETDAGLQVFLPHLTERICKSISANISQRCLSLIIYAGRVLRSL 299
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICK 294
N + LH ++P++++C V + + R DNHW LRDF+AK + + +
Sbjct: 300 SHNKACDMTVTLHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTLVGLVR 352
Score = 71 (30.1 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 35/137 (25%), Positives = 63/137 (45%)
Query: 10 EVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLR- 68
+ A+ +GI++ +T+AA L +++EI++ + K + S R + DV+ A++
Sbjct: 29 QTAAEMLGITSLNTEAAELLEFLSREKLKEIVRLSAKWTQKSARRRMAVADVEHAIRSTR 88
Query: 69 -----NVEPV----YGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 119
N+ V G P++ Y L D DV+ +D E + + P D
Sbjct: 89 QCGGLNISSVDTLNLGIQQLQPIQGTSTGIYSFLKSSADVDVDKEDT-ETFI-KIPRDLR 146
Query: 120 IVCHWLAIEGVQPVIPE 136
++ + L EG QPV E
Sbjct: 147 VISYPLVNEG-QPVQSE 162
>UNIPROTKB|C9JHQ8 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00926390
ProteinModelPortal:C9JHQ8 SMR:C9JHQ8 STRING:C9JHQ8
Ensembl:ENST00000417349 ArrayExpress:C9JHQ8 Bgee:C9JHQ8
Uniprot:C9JHQ8
Length = 76
Score = 146 (56.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 27/65 (41%), Positives = 44/65 (67%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALK 66
D ALK
Sbjct: 72 DYALK 76
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 542 521 0.00090 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 38
No. of states in DFA: 616 (65 KB)
Total size of DFA: 291 KB (2152 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.34u 0.10s 49.44t Elapsed: 00:00:03
Total cpu time: 49.35u 0.10s 49.45t Elapsed: 00:00:03
Start: Tue May 21 04:56:34 2013 End: Tue May 21 04:56:37 2013