BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009148
(542 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224129098|ref|XP_002320500.1| predicted protein [Populus trichocarpa]
gi|222861273|gb|EEE98815.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/543 (76%), Positives = 463/543 (85%), Gaps = 12/543 (2%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIV KET+EVIAQSIGISN S D AL LAPDVE+R+R+IMQEAIKCMRHS+RT LTTDD
Sbjct: 1 MSIVAKETIEVIAQSIGISNLSEDVALTLAPDVEFRMRQIMQEAIKCMRHSKRTRLTTDD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL L NVEP+YGFASGG L+F+RAIG+RDLFY+DDKD++FKDVIEAPLP+APLDT++
Sbjct: 61 VDGALNLTNVEPIYGFASGGALQFKRAIGHRDLFYVDDKDIDFKDVIEAPLPKAPLDTAV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
VCHWLAIEGVQP IPENAP++ IA PS+G +EQ D PV+IKLPVKH+LSRELQLYFDK
Sbjct: 121 VCHWLAIEGVQPAIPENAPLEVIAPPSDGKISEQNDEFPVDIKLPVKHVLSRELQLYFDK 180
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
IT+L V RSDSVLFK+ALVSLATDSGLHPL+PYFTYF+ADEV+RGLN+YSLLFALMRVVW
Sbjct: 181 ITDLTVRRSDSVLFKEALVSLATDSGLHPLIPYFTYFIADEVARGLNDYSLLFALMRVVW 240
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVY 300
+LLQNPHI IEPYLHQLMPSVVTCLVA++LGNR ADNHWELRDFTA LVA+ICKR+GHVY
Sbjct: 241 SLLQNPHIHIEPYLHQLMPSVVTCLVARKLGNRFADNHWELRDFTANLVASICKRFGHVY 300
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
N+LQTRLTKTLLNALLDPKR+LTQHYGA+QGLAALGPNVVRLLLLPNL PYL LLEPEML
Sbjct: 301 NSLQTRLTKTLLNALLDPKRSLTQHYGAIQGLAALGPNVVRLLLLPNLKPYLQLLEPEML 360
Query: 361 LEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTN-GIVATLSNK 419
LEKQKNE+KRHEAW VYGALL AAGQ IYDRLK+FP L S PA +V +TN +V +K
Sbjct: 361 LEKQKNEMKRHEAWHVYGALLCAAGQSIYDRLKMFPALMSHPACAVLRTNEKVVTKRPDK 420
Query: 420 RKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIP 479
RK SM+ EQPP KKIATDGPVD P P+ + T S SS P
Sbjct: 421 RKASMEHMEQPPPKKIATDGPVDMQVEPIAPVPLGDSKTGL-----------STSSEHTP 469
Query: 480 PDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMS 539
S + SR+++DKGDSQA K SAIL QVWKDDLNSG LLVSLFELFGE ILSFIP+PEMS
Sbjct: 470 NYSEAGSRNQKDKGDSQAIKTSAILSQVWKDDLNSGHLLVSLFELFGESILSFIPSPEMS 529
Query: 540 LFL 542
LFL
Sbjct: 530 LFL 532
>gi|225446952|ref|XP_002264290.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Vitis
vinifera]
gi|297739126|emb|CBI28777.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/546 (75%), Positives = 478/546 (87%), Gaps = 7/546 (1%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIV KET+EVIAQSIGI+N S D ALALAPDVEYR+RE+MQEAIKCMRHS+RT LTTDD
Sbjct: 1 MSIVSKETIEVIAQSIGIANLSADVALALAPDVEYRMREVMQEAIKCMRHSKRTVLTTDD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEP+YGF SGGPLRF+RA+G+++LFY+DDKD++FKDVIEAPLP+APLD ++
Sbjct: 61 VDIALNLRNVEPIYGFTSGGPLRFKRAVGHKNLFYIDDKDLDFKDVIEAPLPKAPLDAAV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD-GLPVEIKLPVKHILSRELQLYFD 179
VCHWLAIEGVQP IPENAPV+ IAAPS+G EQKD GLPV+IKLP+KH+LSRELQLYFD
Sbjct: 121 VCHWLAIEGVQPAIPENAPVEVIAAPSDGKKFEQKDDGLPVDIKLPIKHVLSRELQLYFD 180
Query: 180 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 239
KI +L V+RSDS LFK+ALVSLATDSGLHPLVPYFTYF++DEVSRGLN+++LLFALMRVV
Sbjct: 181 KIIDLTVNRSDSALFKEALVSLATDSGLHPLVPYFTYFISDEVSRGLNDFNLLFALMRVV 240
Query: 240 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHV 299
W+LLQNPHI IEPYLHQLMPSVVTCLVAKR+GNRLADNHWELRDFTA LVA+ICKR+GHV
Sbjct: 241 WSLLQNPHIHIEPYLHQLMPSVVTCLVAKRIGNRLADNHWELRDFTANLVASICKRFGHV 300
Query: 300 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEM 359
YN LQTRLTKTLL+A LDPKR++TQHYGA+QGLAALGPN+VRLL++PNL PYL LLEPEM
Sbjct: 301 YNNLQTRLTKTLLHAFLDPKRSMTQHYGAIQGLAALGPNMVRLLIVPNLEPYLRLLEPEM 360
Query: 360 LLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSN 418
LLEKQKNE+KRHEAW VYGALL+A GQ IYDRLK+FP L S PAR V++TNG +V + N
Sbjct: 361 LLEKQKNELKRHEAWCVYGALLRATGQSIYDRLKMFPALPSPPAR-VFRTNGRVVTSPPN 419
Query: 419 KRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADH-PSPSSV 476
KRK + + LE+QP LKKIATDGP+D V T ++ + M+ T P+ ++D D PS SS
Sbjct: 420 KRKANNEHLEQQPSLKKIATDGPMDVVPT-NLSSNMQPPETKG-PVPSTDPDMGPSSSSR 477
Query: 477 QIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAP 536
QIP + S+SR ++ KGDS+A K+SA+L Q W+DDL SG LLVSLFELFGE IL FIPAP
Sbjct: 478 QIPHGNISDSRDRKGKGDSRALKMSAVLTQTWRDDLKSGHLLVSLFELFGESILPFIPAP 537
Query: 537 EMSLFL 542
EMSLFL
Sbjct: 538 EMSLFL 543
>gi|255576099|ref|XP_002528944.1| transcription initiation factor tfiid, putative [Ricinus communis]
gi|223531590|gb|EEF33418.1| transcription initiation factor tfiid, putative [Ricinus communis]
Length = 542
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/543 (75%), Positives = 466/543 (85%), Gaps = 2/543 (0%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKET+EVIAQSIGI+N S DAAL+L PDVEYR+REIMQEAIKCMRHS+RTTLT D
Sbjct: 1 MSIVPKETIEVIAQSIGITNLSEDAALSLTPDVEYRMREIMQEAIKCMRHSKRTTLTCYD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRN+EPVYG ASGG L+F+RAIG+RDLFY+DDKD++FKDVIEAPLP+APLDTSI
Sbjct: 61 VDGALNLRNIEPVYGVASGGALQFKRAIGHRDLFYIDDKDIDFKDVIEAPLPKAPLDTSI 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
VCHWLAIEGVQP IPENAP++ IA P +G NNE KDGLPV+IKLPV+H+LSRELQLYFDK
Sbjct: 121 VCHWLAIEGVQPAIPENAPLEVIAPPPDGKNNELKDGLPVDIKLPVRHVLSRELQLYFDK 180
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
ITEL + RSD LFK+ALVSLATD GLHPLVPYFT F+ADEVSR L+++ LLFALMRVV
Sbjct: 181 ITELTMRRSDLPLFKEALVSLATDPGLHPLVPYFTCFIADEVSRSLSDFQLLFALMRVVR 240
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVY 300
+LLQNPHI IEPYLHQLMPSVVTCLVAKRLGNR ADNHWELRDFTA LVA+ICKR+GHVY
Sbjct: 241 SLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTANLVASICKRFGHVY 300
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
++LQTRLTKTLLNAL DPKR+LTQHYGA+QGLAALGPNVVR L+LPNL PYL +LEPEML
Sbjct: 301 SSLQTRLTKTLLNALFDPKRSLTQHYGAIQGLAALGPNVVRFLVLPNLKPYLQVLEPEML 360
Query: 361 LEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSNK 419
LEKQKNE+KRHEAW VYGALL AAGQC+YDRLK+FP S PA +VW+TNG I+ NK
Sbjct: 361 LEKQKNEMKRHEAWLVYGALLNAAGQCLYDRLKLFPLFPSPPAHAVWRTNGKIITAQLNK 420
Query: 420 RKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIP 479
RK SM EQP K+IATD PV+A+ST S P+ M+ +AT P +++A S SS Q+P
Sbjct: 421 RKASMQPAEQPLPKRIATDDPVNALSTDSSPSRMQWEATTPVPSSDTNAS-ASTSSEQMP 479
Query: 480 PDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMS 539
+ S+ +++R KGD K SAIL QVWKDDL SG+LL SLFELFGEGILSFIP+PEMS
Sbjct: 480 TNHESDCKTERVKGDGGVMKTSAILNQVWKDDLKSGQLLASLFELFGEGILSFIPSPEMS 539
Query: 540 LFL 542
LFL
Sbjct: 540 LFL 542
>gi|449444699|ref|XP_004140111.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cucumis sativus]
Length = 543
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/546 (71%), Positives = 457/546 (83%), Gaps = 7/546 (1%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSI+PKE +EVIAQ IGI+N S+D AL +APDVEYR+REIMQEAIKCMRHS+RTTLT +D
Sbjct: 1 MSIIPKENIEVIAQCIGINNLSSDVALDIAPDVEYRLREIMQEAIKCMRHSKRTTLTAND 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEP+YGFASGGPLRF+RAIG+RDLFYL+DKD+EFKD+I+APLP+AP DT++
Sbjct: 61 VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDIIDAPLPKAPFDTAV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
CHWLAIEGVQP IPENAPV+ I PS+ +NEQ GLPV+IKLPVKHILS+ELQLYFDK
Sbjct: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDAKSNEQMGGLPVDIKLPVKHILSKELQLYFDK 180
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
ITEL VSRS S+LFK+ALVSLATDSGLHPLVPYFT F+ADEV+RGL +YSLLFALMRVVW
Sbjct: 181 ITELVVSRSSSILFKKALVSLATDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVY 300
+LLQNPHI IEPYLHQ+MPSVVTCLVAKRLGNR +DNHWELRDFTAK+VA ICKR+GHVY
Sbjct: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRFSDNHWELRDFTAKVVALICKRFGHVY 300
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
NTLQT+LTKTLLNA LDPKR+LTQHYGA+QGLAALG NVV LL+LPNL PYL LLEPEML
Sbjct: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAIQGLAALGMNVVHLLILPNLEPYLGLLEPEML 360
Query: 361 LEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG--IVATLSN 418
L QKNE+KRHEAWRVYGALL+A GQCIYD +KIFPPL S+PA S+ +TN I T N
Sbjct: 361 LANQKNEMKRHEAWRVYGALLRAVGQCIYDHVKIFPPLPSMPAGSILRTNARVITTTFLN 420
Query: 419 KRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQ 477
KRK + D LE QPPLKK+ D P+ + T+S + ME A P +S++ P+S Q
Sbjct: 421 KRKENADHLEGQPPLKKMVMDSPMGVMPTNSSASHME---GAVNPASSSNSSLILPTSSQ 477
Query: 478 -IPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAP 536
+ ++ S S++ K D Q K SA+L QVWK+DL SGKLL S+ +LFGE +L FIPAP
Sbjct: 478 PLQNETIPGSNSRKGKYDDQILKRSAVLSQVWKEDLKSGKLLTSMLDLFGESMLCFIPAP 537
Query: 537 EMSLFL 542
E+S+FL
Sbjct: 538 ELSMFL 543
>gi|449453563|ref|XP_004144526.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cucumis sativus]
Length = 544
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/545 (71%), Positives = 453/545 (83%), Gaps = 4/545 (0%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS VPKE +EVIAQ +GI+N S D ALA+APDVEYR+REIMQEAIKCMRHS+RTTLT DD
Sbjct: 1 MSAVPKENIEVIAQCVGINNLSPDVALAVAPDVEYRLREIMQEAIKCMRHSKRTTLTADD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEP+YGFASGGPLRF+RA+G+RDLFYL+DKD+EFKDVI+APLP+APLD ++
Sbjct: 61 VDGALNLRNVEPMYGFASGGPLRFKRAMGHRDLFYLEDKDLEFKDVIDAPLPKAPLDAAV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
CHWLAIEGVQP IPENAPV+ I PS+ ++EQKD +PV+IKLPVKHILS+ELQLYFDK
Sbjct: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDTKSSEQKDEVPVDIKLPVKHILSKELQLYFDK 180
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
ITEL VSRS + LFK+ALVSLATDSGLHPLVPYFT ++ADEV+RGL +YSLLFALMRVVW
Sbjct: 181 ITELVVSRSSTDLFKKALVSLATDSGLHPLVPYFTCYIADEVARGLGDYSLLFALMRVVW 240
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVY 300
+LLQNPHI IEPYLHQ+MPSVVTCLVAKRLG+R +DNHWELRDFTAK+VA ICKR+GHVY
Sbjct: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGSRFSDNHWELRDFTAKVVALICKRFGHVY 300
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
NTLQT+LTKTLLNA LDPKR+LTQHYGA++GLAALG NVV LL+LPNL PYL LLEPEML
Sbjct: 301 NTLQTKLTKTLLNAFLDPKRSLTQHYGAIRGLAALGMNVVHLLILPNLEPYLGLLEPEML 360
Query: 361 LEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG--IVATLSN 418
L QKNE+KRHEAW VYGALL+A GQCIY+R+KIFPPL S PA SV +TN I T N
Sbjct: 361 LANQKNEMKRHEAWHVYGALLRAVGQCIYERIKIFPPLLSTPAGSVLRTNARTITTTFPN 420
Query: 419 KRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQ 477
KRK + D LE QPPLK+++ DGP+ + T+S + ME A NS+ P+ S
Sbjct: 421 KRKANADYLEGQPPLKRMSIDGPMGVMLTNSSASHMEGTVVPAAS-GNSNLVSPTSSGQM 479
Query: 478 IPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPE 537
S S S++ K D Q K SA+L QVWK+DLNSGKLL S+ +LFGE +L FIPAPE
Sbjct: 480 QNEAISSGSTSRKGKHDDQILKKSAVLSQVWKEDLNSGKLLTSMLDLFGESMLCFIPAPE 539
Query: 538 MSLFL 542
+SLFL
Sbjct: 540 LSLFL 544
>gi|356499648|ref|XP_003518649.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Glycine max]
Length = 544
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/546 (74%), Positives = 461/546 (84%), Gaps = 6/546 (1%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKET+EVIAQSIGI+N S D ALA+APDVEYR+R+IMQEAIKCMRHS+RTTLT DD
Sbjct: 1 MSIVPKETIEVIAQSIGINNLSHDVALAVAPDVEYRMRQIMQEAIKCMRHSKRTTLTADD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL L+NVEP+YGFASGGPLRF+RA+G+RDLFY+DDKDV+ KDVIEA LP+APLDT++
Sbjct: 61 VDAALNLKNVEPIYGFASGGPLRFKRAVGHRDLFYIDDKDVDLKDVIEASLPKAPLDTAV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD-GLPVEIKLPVKHILSRELQLYFD 179
CHWLAIEGVQP IPENAPV+ I+APS+ +EQKD LPV+IKLPVKH+LSRELQLYFD
Sbjct: 121 TCHWLAIEGVQPAIPENAPVEVISAPSDVKKHEQKDDNLPVDIKLPVKHVLSRELQLYFD 180
Query: 180 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 239
K+ EL +S SDSVLFK+ALVSLATDSGLHPLVPYFT F+ADEVSRGLNN+ LLFALMRVV
Sbjct: 181 KVAELTLSESDSVLFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLNNFPLLFALMRVV 240
Query: 240 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHV 299
+LLQNPHIQIEPYLHQLMPSVVTCLVAKRLG RLADNHWELRDFTA LVA+ICKR+GHV
Sbjct: 241 SSLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGTRLADNHWELRDFTAHLVASICKRFGHV 300
Query: 300 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEM 359
Y+ LQ+RLTKTLLNA LDPK+ALTQHYGA+QGL ALGPNVVRLLLLPNL Y+ LLEPEM
Sbjct: 301 YSNLQSRLTKTLLNAFLDPKKALTQHYGAIQGLGALGPNVVRLLLLPNLETYMQLLEPEM 360
Query: 360 LLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVATLSN- 418
LLEKQKNE+KRHEAWRVYGALL+AAGQCIYDRLKIFP S P +VWKTN V T S
Sbjct: 361 LLEKQKNELKRHEAWRVYGALLRAAGQCIYDRLKIFPTFPSPPLHAVWKTNSKVLTSSTY 420
Query: 419 KRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDA-TAATPLDNSDADHPSPSSV 476
KRK S D LE+QPPLKK ATDG V + P +E+A T A+ D+ S SS
Sbjct: 421 KRKASPDQLEQQPPLKKAATDGEVGVDLMNFSPVHKQEEAGTQASSADSIIGT--SSSSA 478
Query: 477 QIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAP 536
Q+ ++ + + +GD+QA K SA L QVWKD+LNSG+ LVSLFELFGEGILSFI AP
Sbjct: 479 QMKNETTLDGELRGKRGDTQALKTSAALTQVWKDELNSGRTLVSLFELFGEGILSFIKAP 538
Query: 537 EMSLFL 542
EM +FL
Sbjct: 539 EMYMFL 544
>gi|357503231|ref|XP_003621904.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
gi|355496919|gb|AES78122.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
Length = 562
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/562 (67%), Positives = 452/562 (80%), Gaps = 20/562 (3%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKET+EVIAQSIGI+N S D AL++APDVEYR+R+IMQEAIKCMRHS+RTTLT DD
Sbjct: 1 MSIVPKETIEVIAQSIGINNLSPDVALSVAPDVEYRMRQIMQEAIKCMRHSKRTTLTADD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL L+NVEP+YGFASGGPLRF+RA+G+RDLFY+DDKD++ KDVIEA LP+APLDT++
Sbjct: 61 VDAALNLKNVEPIYGFASGGPLRFKRAVGHRDLFYIDDKDLDLKDVIEAALPKAPLDTAL 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD-GLPVEIKLPVKHILSRELQLYFD 179
CHWLAIEGVQP IPENAPV I+APS+ +EQKD LPV+IKLPVKH+LSRELQLYFD
Sbjct: 121 TCHWLAIEGVQPAIPENAPVDVISAPSDIKKHEQKDDNLPVDIKLPVKHVLSRELQLYFD 180
Query: 180 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 239
K+TELA++ DSVLFK+ALVSLATDSGLHPLVPYFT FVADEVSRGL+N+ LLFALMRVV
Sbjct: 181 KVTELALNEPDSVLFKEALVSLATDSGLHPLVPYFTCFVADEVSRGLSNFPLLFALMRVV 240
Query: 240 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHV 299
+LLQNPHI IEPYLHQLMPS+VTCLVAKRLG+RL DNHWELRDFTA LVA+ICKR+GHV
Sbjct: 241 NSLLQNPHIHIEPYLHQLMPSIVTCLVAKRLGSRLTDNHWELRDFTANLVASICKRFGHV 300
Query: 300 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEM 359
Y+ LQ+RL+KTLLNA DPK+A+TQHYGA+QGL ALGPNVVRLLLLPNL Y+ LLEPEM
Sbjct: 301 YSNLQSRLSKTLLNAFSDPKKAMTQHYGAIQGLGALGPNVVRLLLLPNLEAYIRLLEPEM 360
Query: 360 LLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVATL-SN 418
LLE QKNE+KRHEAWRVYGALL+AAGQC+Y LK+FP S +VWKT+ V T N
Sbjct: 361 LLETQKNEMKRHEAWRVYGALLRAAGQCVYVSLKLFPAFPSPLPHTVWKTSASVLTSPPN 420
Query: 419 KRKTS-MDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDAT---AATPLDNSDADHPSPS 474
KRK S M+LE+QPPLKK+ TDG V V +S + EE+ ++ L A +
Sbjct: 421 KRKASPMELEQQPPLKKVDTDGEVSVVQENSSASHKEEETVTQASSAELKIGAASSSGET 480
Query: 475 SVQIPPD-----SGSESRSKR---------DKGDSQAQKLSAILPQVWKDDLNSGKLLVS 520
+I D SG +++ + GD+Q K+S++L +WKD+LNSG++L S
Sbjct: 481 KNKITTDGVVRSSGGDTQDNKITTDGVVRSSGGDTQDLKISSVLAHIWKDELNSGRVLTS 540
Query: 521 LFELFGEGILSFIPAPEMSLFL 542
L ELFGE ILSFI EM +FL
Sbjct: 541 LVELFGENILSFIQNREMCMFL 562
>gi|225460839|ref|XP_002276969.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Vitis vinifera]
Length = 543
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/548 (66%), Positives = 442/548 (80%), Gaps = 11/548 (2%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKET+EVIAQSIGISNFS D A ALA DVEYR+REIMQEAIKCMRHS+RT LT +D
Sbjct: 1 MSIVPKETIEVIAQSIGISNFSPDVAPALATDVEYRVREIMQEAIKCMRHSKRTILTVND 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD ALKLRNVEP+YGF SGGP +F+RA G++DLFY+DDKDVEFKD+IEAPLP+ PLDT +
Sbjct: 61 VDSALKLRNVEPLYGFTSGGPRQFKRAAGHKDLFYVDDKDVEFKDLIEAPLPKTPLDTGV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQK-DGLPVEIKLPVKHILSRELQLYFD 179
+ HWLAIEGVQP I ENAP++A+A PS+ +E K DGLPV+ KLPVKH+LSRELQLYFD
Sbjct: 121 ITHWLAIEGVQPAISENAPIEALAVPSDNKKSEYKEDGLPVDTKLPVKHVLSRELQLYFD 180
Query: 180 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 239
KI EL +SRSDS+LFK+ALVSLATDSG+HPLVPYFTYF+ADEV+R LN++S+LFALMRV
Sbjct: 181 KIKELTLSRSDSILFKEALVSLATDSGIHPLVPYFTYFIADEVTRNLNDFSILFALMRVA 240
Query: 240 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHV 299
+LLQN I IEPYLHQLMPS++TCLVAKRLG+R +DNHWELR FTA LVA++CKRYGHV
Sbjct: 241 RSLLQNQQIHIEPYLHQLMPSIITCLVAKRLGSRFSDNHWELRSFTANLVASVCKRYGHV 300
Query: 300 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEM 359
Y+ LQ R+T+TLL+A LDP +AL QHYGA+QGLAA GP+VVRLL+LPNL PYL LLEPEM
Sbjct: 301 YHNLQPRVTRTLLHAFLDPTKALPQHYGAIQGLAAFGPSVVRLLILPNLEPYLRLLEPEM 360
Query: 360 LLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTN-GIVATLSN 418
LEKQKN +KRHEAWRVYGALL AAG C+YDRLK FP L S P R++ K+N I+ T +
Sbjct: 361 QLEKQKNGMKRHEAWRVYGALLCAAGTCMYDRLKTFPNLLSPPTRAILKSNKKILPTKPS 420
Query: 419 KRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTP---MEEDATAATPLDNSDADHPSPS 474
KRK S D L +QPPLKK+ATDG + + +S+ + + +T + +SD S S
Sbjct: 421 KRKASTDNLMQQPPLKKLATDGSMGVMPINSLAVDKQGLTGGFSTSTAVGSSDVGLSSMS 480
Query: 475 SVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIP 534
Q+ ++ S R R+ G ++A K SA+L Q WK D+N+G+L SLFE FGE + F P
Sbjct: 481 Q-QLASENISGGR--REVG-TRALKASAVLAQAWK-DVNAGQLSASLFEYFGESMFCFTP 535
Query: 535 APEMSLFL 542
+PE+SLFL
Sbjct: 536 SPELSLFL 543
>gi|297737507|emb|CBI26708.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/552 (65%), Positives = 439/552 (79%), Gaps = 15/552 (2%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKET+EVIAQSIGISNFS D A ALA DVEYR+REIMQEAIKCMRHS+RT LT +D
Sbjct: 1 MSIVPKETIEVIAQSIGISNFSPDVAPALATDVEYRVREIMQEAIKCMRHSKRTILTVND 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD ALKLRNVEP+YGF SGGP +F+RA G++DLFY+DDKDVEFKD+IEAPLP+ PLDT +
Sbjct: 61 VDSALKLRNVEPLYGFTSGGPRQFKRAAGHKDLFYVDDKDVEFKDLIEAPLPKTPLDTGV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQK-DGLPVEIKLPVKHILSRELQLYFD 179
+ HWLAIEGVQP I ENAP++A+A PS+ +E K DGLPV+ KLPVKH+LSRELQLYFD
Sbjct: 121 ITHWLAIEGVQPAISENAPIEALAVPSDNKKSEYKEDGLPVDTKLPVKHVLSRELQLYFD 180
Query: 180 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 239
KI EL +SRSDS+LFK+ALVSLATDSG+HPLVPYFTYF+ADEV+R LN++S+LFALMRV
Sbjct: 181 KIKELTLSRSDSILFKEALVSLATDSGIHPLVPYFTYFIADEVTRNLNDFSILFALMRVA 240
Query: 240 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHV 299
+LLQN I IEPYLHQLMPS++TCLVAKRLG+R +DNHWELR FTA LVA++CKRYGHV
Sbjct: 241 RSLLQNQQIHIEPYLHQLMPSIITCLVAKRLGSRFSDNHWELRSFTANLVASVCKRYGHV 300
Query: 300 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEM 359
Y+ LQ R+T+TLL+A LDP +AL QHYGA+QGLAA GP+VVRLL+LPNL PYL LLEPEM
Sbjct: 301 YHNLQPRVTRTLLHAFLDPTKALPQHYGAIQGLAAFGPSVVRLLILPNLEPYLRLLEPEM 360
Query: 360 LLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVATLS-- 417
LEKQKN +KRHEAWRVYGALL AAG C+YDRLK FP L S P R++ K+N +
Sbjct: 361 QLEKQKNGMKRHEAWRVYGALLCAAGTCMYDRLKTFPNLLSPPTRAILKSNKKILPTKPK 420
Query: 418 ---NKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTP---MEEDATAATPLDNSDADH 470
KRK S D L +QPPLKK+ATDG + + +S+ + + +T + +SD
Sbjct: 421 INPGKRKASTDNLMQQPPLKKLATDGSMGVMPINSLAVDKQGLTGGFSTSTAVGSSDVGL 480
Query: 471 PSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGIL 530
S S Q+ ++ S R R+ G ++A K SA+L Q WK D+N+G+L SLFE FGE +
Sbjct: 481 SSMSQ-QLASENISGGR--REVG-TRALKASAVLAQAWK-DVNAGQLSASLFEYFGESMF 535
Query: 531 SFIPAPEMSLFL 542
F P+PE+SLFL
Sbjct: 536 CFTPSPELSLFL 547
>gi|115436920|ref|NP_001043168.1| Os01g0510800 [Oryza sativa Japonica Group]
gi|20804496|dbj|BAB92191.1| putative TAF6 [Oryza sativa Japonica Group]
gi|113532699|dbj|BAF05082.1| Os01g0510800 [Oryza sativa Japonica Group]
gi|215768003|dbj|BAH00232.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618539|gb|EEE54671.1| hypothetical protein OsJ_01969 [Oryza sativa Japonica Group]
Length = 541
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/546 (62%), Positives = 437/546 (80%), Gaps = 9/546 (1%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKET+EVI QS+GI+N D + ALAPDVEYR+REIMQEAIKCMRH++RT LT DD
Sbjct: 1 MSIVPKETIEVIGQSVGIANLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEPVYGFASG PLRF+RA+G++DLFY+DD++V+FK++IEAPLP+APLDT++
Sbjct: 61 VDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDREVDFKEIIEAPLPKAPLDTAV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE--QKDGLPVEIKLPVKHILSRELQLYF 178
V HWLAIEGVQP IPEN PV AI AP+ E + DGLPV+IKLPVKH+LSRELQ+YF
Sbjct: 121 VAHWLAIEGVQPAIPENPPVDAIVAPTENKRTEHGKDDGLPVDIKLPVKHVLSRELQMYF 180
Query: 179 DKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRV 238
DKI EL +SRS++ +F++ALVSL+ DSGLHPLVPYF+YF+ADEV+R L + +LFALMRV
Sbjct: 181 DKIAELTMSRSETSVFREALVSLSRDSGLHPLVPYFSYFIADEVTRSLGDLPVLFALMRV 240
Query: 239 VWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGH 298
V +LL NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNHWELRDF+A LV ++C+R+GH
Sbjct: 241 VQSLLHNPHIHIEPYLHQLMPSIITCMVAKRLGHRLSDNHWELRDFSANLVGSVCRRFGH 300
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
Y+ +QTR+T+TL+ LDP+++LTQHYGA+QG++ALGP+ +RLLLLPNL Y+ LLEPE
Sbjct: 301 AYHNIQTRVTRTLVQGFLDPQKSLTQHYGAIQGISALGPSAIRLLLLPNLETYMQLLEPE 360
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVATLS- 417
+ L+KQKNE+KR EAWRVYGALL AAG+C+YDRLK+FP L S R + ++N V T +
Sbjct: 361 LQLDKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPNLLSPSTRPLLRSNKRVVTNNP 420
Query: 418 NKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSV 476
NKRK+S DL QPPLKK+ TDG +++++++ MP M+ +T L N S S
Sbjct: 421 NKRKSSTDLSTSQPPLKKMTTDGAMNSMTSAPMPGTMD---GFSTQLPNPSMTQTSSSGQ 477
Query: 477 QIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAP 536
+ +S + +RD+G + Q++S +L WK+D N+G LL SL+E+FGE I SF+ P
Sbjct: 478 LV--ESTASGVIRRDQGSNHTQRVSTVLRLAWKEDQNAGHLLSSLYEVFGEAIFSFVQPP 535
Query: 537 EMSLFL 542
E+S FL
Sbjct: 536 EISFFL 541
>gi|326488229|dbj|BAJ93783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 547
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/553 (63%), Positives = 438/553 (79%), Gaps = 17/553 (3%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKET+EVIAQSIGI + D + ALAPDVEYR+REIMQEAIKCMRH++RT LT DD
Sbjct: 1 MSIVPKETIEVIAQSIGIPSLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEPVYGFASG LRF+RA+G++DLFY+DD++V+FK++IEAPLP+APLDT++
Sbjct: 61 VDSALSLRNVEPVYGFASGDHLRFKRAVGHKDLFYIDDREVDFKEIIEAPLPKAPLDTAV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQ--KDGLPVEIKLPVKHILSRELQLYF 178
V HWLAIEGVQP IPEN P+ AI+AP+ EQ DGLPV+IKLPVKHILSRELQ+YF
Sbjct: 121 VAHWLAIEGVQPAIPENPPIDAISAPTENKRTEQVKDDGLPVDIKLPVKHILSRELQMYF 180
Query: 179 DKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRV 238
DKI EL +SRS + +F++ALVSL+ DSGLHPLVPYF+YF+ADEV+R L + +LFALMRV
Sbjct: 181 DKIAELTMSRSSTPIFREALVSLSKDSGLHPLVPYFSYFIADEVTRSLADLPVLFALMRV 240
Query: 239 VWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGH 298
V +LL+NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNHWELRDF+A LVA++C+RYGH
Sbjct: 241 VQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWELRDFSANLVASVCRRYGH 300
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
VY+ LQ RLTKTL++A LDP +ALTQHYGAVQG++ALGP+ +RLLLLPNL Y+ LL+PE
Sbjct: 301 VYHNLQIRLTKTLVHAFLDPHKALTQHYGAVQGISALGPSAIRLLLLPNLQTYMQLLDPE 360
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVATLS- 417
+ LEKQ NE+KR EAWRVYGALL AAG+C+Y+RLK+FP L R + ++N VAT +
Sbjct: 361 LQLEKQSNEMKRKEAWRVYGALLCAAGKCLYERLKLFPNLLCPSTRPLLRSNSRVATNNP 420
Query: 418 NKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSV 476
NKRK+S DL QPPLKK+A+D VS S M + A +D A P+P +
Sbjct: 421 NKRKSSTDLSASQPPLKKMASD-----VSMSPMGSAAPVAGNMAGSMDGFSAQLPNPGMM 475
Query: 477 QIPPDSGSESRS-------KRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGI 529
Q SG + S +RD+G + AQ++SA+L Q WK+D ++G LL SL E+FGE I
Sbjct: 476 QA-SSSGQKVESMTAAGAIRRDQGSNHAQRVSAVLRQAWKEDQDAGHLLGSLHEVFGEAI 534
Query: 530 LSFIPAPEMSLFL 542
SFI PE+S+FL
Sbjct: 535 FSFIQPPELSIFL 547
>gi|357157836|ref|XP_003577929.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Brachypodium distachyon]
Length = 545
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/552 (62%), Positives = 442/552 (80%), Gaps = 17/552 (3%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKET+EVIAQS+GI+ D + ALAPDVEYR+REIMQEAIKCMRH++RT LT DD
Sbjct: 1 MSIVPKETIEVIAQSVGIATLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEPVYGFASG PLRF+RA+G++DLFY+DD++V+FK++IEAPLP+APLDT++
Sbjct: 61 VDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDREVDFKEIIEAPLPKAPLDTAV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE--QKDGLPVEIKLPVKHILSRELQLYF 178
V HWLAIEGVQP IPEN P+ I AP+ E + DGLPV+IKLPVKHILSRELQ+YF
Sbjct: 121 VAHWLAIEGVQPAIPENPPIDVILAPTESKRTEHVKDDGLPVDIKLPVKHILSRELQMYF 180
Query: 179 DKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRV 238
DKI EL +SRS++ +F++ALVSL+ DSGLHPLVPYF+YF+ADEV+R L + +LFALMRV
Sbjct: 181 DKIAELTMSRSNTSVFREALVSLSKDSGLHPLVPYFSYFIADEVTRSLADLPVLFALMRV 240
Query: 239 VWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGH 298
V +LL+NPH+ IEPYLHQLMP ++TC+VAKRLG+RL+DNHWELRDF+A LVA++C+RYGH
Sbjct: 241 VQSLLRNPHVHIEPYLHQLMPPMITCIVAKRLGHRLSDNHWELRDFSANLVASVCRRYGH 300
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
VY+ LQ RLTKTL++A LDP +ALTQHYGAVQG++ALGP+ +RLLLLPNL Y+ LLEPE
Sbjct: 301 VYHNLQIRLTKTLIHAFLDPHKALTQHYGAVQGISALGPSAIRLLLLPNLETYMQLLEPE 360
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVAT-LS 417
+ LEKQKNE+KR EAWRVYGALL AAG+C+Y+RLK+FP L S R + ++N VAT S
Sbjct: 361 LQLEKQKNEMKRKEAWRVYGALLCAAGKCLYERLKLFPGLLSPSTRPLLRSNKRVATNNS 420
Query: 418 NKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSV 476
NKRK+S D QPPLKK+ATD +++++++ + T +D A P+P +
Sbjct: 421 NKRKSSTDHSASQPPLKKMATDVSMNSMASAPIV------GTMVGTMDGFSAQLPNPGMM 474
Query: 477 QIPPDSGSESRS------KRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGIL 530
Q SG S +RD+G++ AQ++SA+L Q WK+D ++G LL SL+E+FGE I
Sbjct: 475 Q-ALSSGQMVESITQVPIRRDQGNNHAQRVSAVLRQAWKEDQDAGHLLESLYEVFGEAIF 533
Query: 531 SFIPAPEMSLFL 542
SFI PE+S+F+
Sbjct: 534 SFIQPPEISIFV 545
>gi|219887973|gb|ACL54361.1| unknown [Zea mays]
gi|413956299|gb|AFW88948.1| putative TATA binding protein family protein [Zea mays]
Length = 545
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/546 (63%), Positives = 436/546 (79%), Gaps = 5/546 (0%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKET+EVIAQS+GI + D A+ALAPDVEYR+REIMQE+IKCMRH++RT LT DD
Sbjct: 1 MSIVPKETIEVIAQSVGIPSLGADVAVALAPDVEYRLREIMQESIKCMRHAKRTVLTADD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEPVYGFASG PLRF+RA+G++DLFYLDD++V+FK++I+ PLP+APLDTS+
Sbjct: 61 VDSALGLRNVEPVYGFASGDPLRFKRAVGHKDLFYLDDREVDFKEIIDCPLPKAPLDTSV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE--QKDGLPVEIKLPVKHILSRELQLYF 178
V HWLAIEGVQP IPEN + AI P+ +E + DGLP ++KLPVKH+LSRELQ+YF
Sbjct: 121 VAHWLAIEGVQPAIPENPAIDAIVPPTENKRSEHGKDDGLPADVKLPVKHVLSRELQMYF 180
Query: 179 DKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRV 238
DKI EL +SRSD+ LFK+ALVSLA DSGLHPLVPYF+YF+ADEV+R L + +L ALMRV
Sbjct: 181 DKIAELTMSRSDTSLFKEALVSLAKDSGLHPLVPYFSYFIADEVTRSLGDLPVLLALMRV 240
Query: 239 VWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGH 298
V +LL+NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNHWELRDF+A LVA +C+R+GH
Sbjct: 241 VQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWELRDFSANLVALVCQRFGH 300
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
VY+ LQ RLTKTL++A LDP ++LTQHYGAVQG++ALGP+ +RLLLLPNL Y+ LLEPE
Sbjct: 301 VYHNLQNRLTKTLIHAFLDPAKSLTQHYGAVQGISALGPSAIRLLLLPNLVTYMQLLEPE 360
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVATLS- 417
+ LEKQKNE+KR EAWRVYGALL AAG+C+YDRLK+FP L S R + ++N V T +
Sbjct: 361 LQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPGLLSPSMRPLLQSNKRVLTNNP 420
Query: 418 NKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSV 476
NKRK+S DL QPPLKK+ATD ++++++SM M + A P + SS
Sbjct: 421 NKRKSSTDLSATQPPLKKMATDATANSMASASMGGNM-QGAMDGFPNQLGNPGMMQASSS 479
Query: 477 QIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAP 536
+S + +RD+G AQ++SA+L Q WK+D ++G LL SL+E+FGE I SF+ P
Sbjct: 480 GQTVESIPSAAVRRDQGSDLAQRVSAVLRQAWKEDQDTGHLLGSLYEVFGEAIFSFVQPP 539
Query: 537 EMSLFL 542
E+SLF+
Sbjct: 540 EISLFV 545
>gi|222424297|dbj|BAH20105.1| AT1G04950 [Arabidopsis thaliana]
Length = 549
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/552 (67%), Positives = 441/552 (79%), Gaps = 13/552 (2%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKETVEVIAQSIGI+N +AAL LAPDVEYR+REIMQEAIKCMRHS+RTTLT D
Sbjct: 1 MSIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEP+YGFASGGP RFR+AIG+RDLFY DD++V+FKDVIEAPLP+APLDT I
Sbjct: 61 VDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEI 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
VCHWLAIEGVQP IPENAP++ I AP+ +EQKDG ++++LPVKH+LSRELQLYF K
Sbjct: 121 VCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQKDGPLIDVRLPVKHVLSRELQLYFQK 180
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
I ELA+S+S+ L+K+ALVSLA+DSGLHPLVPYFT F+ADEVS GLN++ LLF LM +V
Sbjct: 181 IAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLNDFRLLFNLMHIVV 240
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVY 300
+LLQNPHI IEPYLHQLMPSVVTCLV+++LGNR ADNHWELRDF A LV+ ICKRYG VY
Sbjct: 241 SLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAANLVSLICKRYGTVY 300
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
TLQ+RLT+TL+NALLDPK+ALTQHYGA+QGLAALG VVRLL+L NL PYLSLLEPE+
Sbjct: 301 ITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLEPELN 360
Query: 361 LEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG---IVATLS 417
EKQKN++K +EAWRVYGALL+AAG CI+ RLKIFPPL S + K G I++T
Sbjct: 361 AEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSFLHKGKGKGKIISTDP 420
Query: 418 NKRKTSMD-LEEQPPLKKIAT-DGPVDAVST--SSMPTPMEEDATAATPLDNSDADHPSP 473
+KRK S+D E Q P K++ T DGP D V + S PM+ D DN + P
Sbjct: 421 HKRKLSVDSSENQSPQKRLITMDGP-DGVHSQDQSGSAPMQVDNPVEN--DNPPQNSVQP 477
Query: 474 SSVQIPPDSG-SESRSKRDK--GDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGIL 530
SS + D+ SESR+ + K G S+A + AIL Q+WKDDL+SG+LLV L EL+G+ IL
Sbjct: 478 SSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRIL 537
Query: 531 SFIPAPEMSLFL 542
FIP+ EMS+FL
Sbjct: 538 PFIPSTEMSVFL 549
>gi|15220358|ref|NP_171987.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|30679057|ref|NP_849592.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|79316742|ref|NP_001030969.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|7211972|gb|AAF40443.1|AC004809_1 Strong similarity to the TATA binding protein-associated factor
from A. thaliana gb|Y13673. ESTs gb|N38153 and gb|W43450
come from this gene [Arabidopsis thaliana]
gi|15293057|gb|AAK93639.1| putative TATA binding protein-associated factor [Arabidopsis
thaliana]
gi|20259031|gb|AAM14231.1| putative TATA binding protein-associated factor [Arabidopsis
thaliana]
gi|39545920|gb|AAR28023.1| TAF6 [Arabidopsis thaliana]
gi|332189645|gb|AEE27766.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|332189646|gb|AEE27767.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|332189647|gb|AEE27768.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
Length = 549
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/552 (67%), Positives = 441/552 (79%), Gaps = 13/552 (2%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKETVEVIAQSIGI+N +AAL LAPDVEYR+REIMQEAIKCMRHS+RTTLT D
Sbjct: 1 MSIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEP+YGFASGGP RFR+AIG+RDLFY DD++V+FKDVIEAPLP+APLDT I
Sbjct: 61 VDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEI 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
VCHWLAIEGVQP IPENAP++ I AP+ +EQKDG ++++LPVKH+LSRELQLYF K
Sbjct: 121 VCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQKDGPLIDVRLPVKHVLSRELQLYFQK 180
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
I ELA+S+S+ L+K+ALVSLA+DSGLHPLVPYFT F+ADEVS GLN++ LLF LM +V
Sbjct: 181 IAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLNDFRLLFNLMHIVR 240
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVY 300
+LLQNPHI IEPYLHQLMPSVVTCLV+++LGNR ADNHWELRDF A LV+ ICKRYG VY
Sbjct: 241 SLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAANLVSLICKRYGTVY 300
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
TLQ+RLT+TL+NALLDPK+ALTQHYGA+QGLAALG VVRLL+L NL PYLSLLEPE+
Sbjct: 301 ITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLEPELN 360
Query: 361 LEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG---IVATLS 417
EKQKN++K +EAWRVYGALL+AAG CI+ RLKIFPPL S + K G I++T
Sbjct: 361 AEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSFLHKGKGKGKIISTDP 420
Query: 418 NKRKTSMD-LEEQPPLKKIAT-DGPVDAVST--SSMPTPMEEDATAATPLDNSDADHPSP 473
+KRK S+D E Q P K++ T DGP D V + S PM+ D DN + P
Sbjct: 421 HKRKLSVDSSENQSPQKRLITMDGP-DGVHSQDQSGSAPMQVDNPVEN--DNPPQNSVQP 477
Query: 474 SSVQIPPDSG-SESRSKRDK--GDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGIL 530
SS + D+ SESR+ + K G S+A + AIL Q+WKDDL+SG+LLV L EL+G+ IL
Sbjct: 478 SSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRIL 537
Query: 531 SFIPAPEMSLFL 542
FIP+ EMS+FL
Sbjct: 538 PFIPSTEMSVFL 549
>gi|222423929|dbj|BAH19928.1| AT1G04950 [Arabidopsis thaliana]
Length = 549
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/552 (67%), Positives = 440/552 (79%), Gaps = 13/552 (2%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKETVEVIAQSIGI+N +AAL LAPDVEYR+REIMQEAIKCMRHS+RTTLT D
Sbjct: 1 MSIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEP+YGFASGGP RFR+AIG+RDLFY DD++V+FKDVIEAPLP+APLDT I
Sbjct: 61 VDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEI 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
VCHWLAIEGVQP IPENAP++ I AP+ +EQKDG ++++LPVKH+LSRELQLYF K
Sbjct: 121 VCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQKDGPLIDVRLPVKHVLSRELQLYFQK 180
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
I ELA+S+S+ L+K+ALVSLA+DSGLHPLVPYFT F+ADEVS GLN++ LLF LM +V
Sbjct: 181 IAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLNDFRLLFNLMHIVR 240
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVY 300
+LLQNPHI IEPYLHQLMPSVVTCLV+++LGNR ADNHWELRDF A LV+ ICKRYG VY
Sbjct: 241 SLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAANLVSLICKRYGTVY 300
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
TLQ+RLT+TL+NALLDPK+ALTQHYGA+QGLAALG VVRLL+L NL PYLSLLEPE+
Sbjct: 301 ITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLEPELN 360
Query: 361 LEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG---IVATLS 417
EKQKN++K +EAWRVYGALL+ AG CI+ RLKIFPPL S + K G I++T
Sbjct: 361 AEKQKNQMKIYEAWRVYGALLRVAGLCIHGRLKIFPPLPSPSPSFLHKGKGKGKIISTDP 420
Query: 418 NKRKTSMD-LEEQPPLKKIAT-DGPVDAVST--SSMPTPMEEDATAATPLDNSDADHPSP 473
+KRK S+D E Q P K++ T DGP D V + S PM+ D DN + P
Sbjct: 421 HKRKLSVDSSENQSPQKRLITMDGP-DGVHSQDQSGSAPMQVDNPVEN--DNPPQNSVQP 477
Query: 474 SSVQIPPDSG-SESRSKRDK--GDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGIL 530
SS + D+ SESR+ + K G S+A + AIL Q+WKDDL+SG+LLV L EL+G+ IL
Sbjct: 478 SSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRIL 537
Query: 531 SFIPAPEMSLFL 542
FIP+ EMS+FL
Sbjct: 538 PFIPSTEMSVFL 549
>gi|297848746|ref|XP_002892254.1| TAFII59 [Arabidopsis lyrata subsp. lyrata]
gi|297338096|gb|EFH68513.1| TAFII59 [Arabidopsis lyrata subsp. lyrata]
Length = 554
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/557 (66%), Positives = 441/557 (79%), Gaps = 18/557 (3%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKETVEVIAQSIGI+N +AAL LAPDVEYR+REIMQEAIKCMRHS+RTTLT D
Sbjct: 1 MSIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEP+YGFASGGP RFR+AIG+RDLFY DD++V+FKDVIEAPLP+APLDT I
Sbjct: 61 VDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDTEI 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
VCHWLAIEGVQP IPENAP++ I AP+ +EQKDG P++++LPVKH+LSRELQLYF K
Sbjct: 121 VCHWLAIEGVQPAIPENAPLEVIRAPAENKIHEQKDGPPIDVRLPVKHVLSRELQLYFQK 180
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADE-------VSRGLNNYSLLF 233
I ELA+S+S+ LFK+ALVSLA+DSGLHPLVPYFT F+ADE VS GL ++ LLF
Sbjct: 181 IAELAMSKSNPALFKEALVSLASDSGLHPLVPYFTNFIADEVTLCTTKVSNGLKDFRLLF 240
Query: 234 ALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAIC 293
LM +V +LLQNPHI IEPYL+QLMPSVVTCLV+++LGNR ADNHWELRDF + LVA IC
Sbjct: 241 NLMHIVRSLLQNPHINIEPYLYQLMPSVVTCLVSRKLGNRFADNHWELRDFASNLVALIC 300
Query: 294 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 353
KRYG VY TLQ+RLT+TL+NALLDPK+ALTQHYGA++GLAALG NVVRLL+L NL PYLS
Sbjct: 301 KRYGPVYITLQSRLTRTLVNALLDPKKALTQHYGAIRGLAALGHNVVRLLILSNLEPYLS 360
Query: 354 LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-I 412
LLEPE+ EKQKN++K +EAW VYGALL+AAG CI+DRLKIFPPL S + K G I
Sbjct: 361 LLEPELDAEKQKNQMKNYEAWCVYGALLRAAGLCIHDRLKIFPPLPSPSPSFLRKGKGKI 420
Query: 413 VATLSNKRKTSMD-LEEQPPLKKIAT-DGPVDAVST--SSMPTPMEEDATAATPLDNSDA 468
+ T +KRK S+D E Q P K++ T DGP D V + S PM+ D DN
Sbjct: 421 INTDPHKRKLSIDSSENQSPQKRLITMDGP-DGVQSQDQSGSAPMQVDNPVEN--DNPPQ 477
Query: 469 DHPSPSSVQIPPDSG-SESRSKRDK--GDSQAQKLSAILPQVWKDDLNSGKLLVSLFELF 525
+ PSS + D+ SESR+ + K G S+A + AIL Q+WKDDL+SG+LLV L EL+
Sbjct: 478 NSIQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELY 537
Query: 526 GEGILSFIPAPEMSLFL 542
G+ +L FIP+ EMS+FL
Sbjct: 538 GDRVLPFIPSTEMSVFL 554
>gi|224056415|ref|XP_002298845.1| predicted protein [Populus trichocarpa]
gi|222846103|gb|EEE83650.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/549 (63%), Positives = 421/549 (76%), Gaps = 31/549 (5%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
SIV KE +EVIAQ IGI+N S D +L LAPDVEYR+REI+QEAIKCMRHSRRT LT DV
Sbjct: 4 SIVAKEAIEVIAQGIGITNLSPDVSLTLAPDVEYRLREIIQEAIKCMRHSRRTALTAHDV 63
Query: 62 DEALKLRNVEPVYGFASGG---PLRFRRAI--GYRDLFYLDDKDVEFKDVIEAPLPRAPL 116
D AL LRNVEP+YGF SGG PLRF+RA G++DL+Y+DDKDV FK VIEAP P+ PL
Sbjct: 64 DTALILRNVEPIYGFGSGGDKVPLRFKRAAAAGHKDLYYIDDKDVNFKHVIEAPPPKPPL 123
Query: 117 DTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD-GLPVEIKLPVKHILSRELQ 175
DTS+ HWLAIEGVQP IPEN P++ I S+G ++ KD GL +++KLPVK ILSRELQ
Sbjct: 124 DTSLTSHWLAIEGVQPAIPENVPIEVI---SDGKKSDYKDDGLSIDVKLPVKDILSRELQ 180
Query: 176 LYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFAL 235
LYF+K+TEL RS+S +FKQALVSLATDSGLHPLVPYF F+ADEVSR LNN+SLL A+
Sbjct: 181 LYFEKVTELTARRSESAIFKQALVSLATDSGLHPLVPYFIQFIADEVSRNLNNFSLLLAV 240
Query: 236 MRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKR 295
MR+ +LLQNP+I IEPYLHQLMPS++TCLVAKRLGNR +DNHWELR+FTA LVA+ICKR
Sbjct: 241 MRIARSLLQNPYIHIEPYLHQLMPSIITCLVAKRLGNRFSDNHWELRNFTANLVASICKR 300
Query: 296 YGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLL 355
+GH Y+ LQ R+ +TL++A LDP ++L QHYG++QGLAALGP+VVRLL+LPNL PYL LL
Sbjct: 301 FGHAYHNLQPRIIRTLVHAFLDPTKSLPQHYGSIQGLAALGPSVVRLLILPNLEPYLLLL 360
Query: 356 EPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVAT 415
E EMLLEKQKNE+KRHEAW+VYGAL +AAG C+YDRLK+ P L P+R++WK+NG V T
Sbjct: 361 EQEMLLEKQKNEIKRHEAWQVYGALTRAAGLCMYDRLKMLPGLFIPPSRAIWKSNGRVMT 420
Query: 416 -LSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSP 473
+ NKRK S D L +QP LKKIATD + A+ +SMP M+ AT + L N +
Sbjct: 421 AMPNKRKASTDNLMQQPLLKKIATDSAIGAMPMNSMPVEMQGAATISRQLSNEN------ 474
Query: 474 SSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFI 533
+P R + + K S +L Q WK+D+++G LL SLFELF E + SF
Sbjct: 475 ----VP----------RREISGRGLKTSTVLAQAWKEDMDAGHLLASLFELFSESMFSFT 520
Query: 534 PAPEMSLFL 542
P PE+S FL
Sbjct: 521 PKPELSFFL 529
>gi|218188315|gb|EEC70742.1| hypothetical protein OsI_02149 [Oryza sativa Indica Group]
Length = 501
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/506 (61%), Positives = 403/506 (79%), Gaps = 9/506 (1%)
Query: 41 MQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKD 100
MQEAIKCMRH++RT LT DDVD AL LRNVEPVYGFASG PLRF+RA+G++DLFY+DD++
Sbjct: 1 MQEAIKCMRHAKRTVLTADDVDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDRE 60
Query: 101 VEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE--QKDGL 158
V+FK++IEAPLP+APLDT++V HWLAIEGVQP IPEN PV AI AP+ E + DGL
Sbjct: 61 VDFKEIIEAPLPKAPLDTAVVAHWLAIEGVQPAIPENPPVDAIVAPTENKRTEHGKDDGL 120
Query: 159 PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV 218
PV+IKLPVKH+LSRELQ+YFDKI EL +SRS++ +F++ALVSL+ DSGLHPLVPYF+YF+
Sbjct: 121 PVDIKLPVKHVLSRELQMYFDKIAELTMSRSETSVFREALVSLSRDSGLHPLVPYFSYFI 180
Query: 219 ADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNH 278
ADEV+R L + +LFALMRVV +LL NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNH
Sbjct: 181 ADEVTRSLGDLPVLFALMRVVQSLLHNPHIHIEPYLHQLMPSIITCMVAKRLGHRLSDNH 240
Query: 279 WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPN 338
WELRDF+A LV ++C+R+GH Y+ +QTR+T+TL+ LDP+++LTQHYGA+QG++ALGP+
Sbjct: 241 WELRDFSANLVGSVCRRFGHAYHNIQTRVTRTLVQGFLDPQKSLTQHYGAIQGISALGPS 300
Query: 339 VVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPL 398
+RLLLLPNL Y+ LLEPE+ L+KQKNE+KR EAWRVYGALL AAG+C+YDRLK+FP L
Sbjct: 301 AIRLLLLPNLETYMQLLEPELQLDKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPNL 360
Query: 399 SSLPARSVWKTNGIVATLS-NKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEED 456
S R + ++N V T + NKRK+S DL QPPLKK+ TDG +++++++ MP M+
Sbjct: 361 LSPSTRPLLRSNKRVVTNNPNKRKSSTDLSTSQPPLKKMTTDGAMNSMTSAPMPGTMD-- 418
Query: 457 ATAATPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGK 516
+T L N S S + +S + +RD+G + Q++S +L WK+D N+G
Sbjct: 419 -GFSTQLPNPSMTQTSSSGQLV--ESTASGVIRRDQGSNHTQRVSTVLRLAWKEDQNAGH 475
Query: 517 LLVSLFELFGEGILSFIPAPEMSLFL 542
LL SL+E+FGE I SF+ PE+S FL
Sbjct: 476 LLSSLYEVFGEAIFSFVQPPEISFFL 501
>gi|2196466|emb|CAA74021.1| TATA binding protein-associated factor [Arabidopsis thaliana]
Length = 527
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 340/527 (64%), Positives = 404/527 (76%), Gaps = 15/527 (2%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKETVEVIAQSIGI+N +AAL LAPDVEYR+REIMQEAIKCM HS+RTTLT D
Sbjct: 1 MSIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKCMLHSKRTTLTASD 60
Query: 61 VDEALKLR-NVEPVYGFA-SGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
VD A +L+ NVEP+YGF FR+AIG+RDLFY DD++V+FKDVIEAPLP+APLDT
Sbjct: 61 VDGASQLKGNVEPIYGFGLRRAIFGFRKAIGHRDLFYTDDREVDFKDVIEAPLPKAPLDT 120
Query: 119 SIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYF 178
IVCHWLAIEGVQP IPENAP++ I AP N K ++++LPVKH+LSRELQLYF
Sbjct: 121 EIVCHWLAIEGVQPAIPENAPLEVIRAPGRNQNPVTKRRPLIDVRLPVKHVLSRELQLYF 180
Query: 179 DKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRV 238
KI ELA+S+S+ L+K+ALVSLA+DSGLHPLVPYFT F+ADEVS GLN++ LLF LM +
Sbjct: 181 QKIAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLNDFRLLFNLMHI 240
Query: 239 VWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGH 298
V +LLQNPHI EPYLHQLMPSVVTCLV+++LGNR ADNHWELRD A LV+ ICKRYG
Sbjct: 241 VRSLLQNPHIHREPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDLAANLVSLICKRYGT 300
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
VY TLQ+RLT+TL+NALLDPK+ALTQHYGA+QGLAALG VVRLL+L NL PYLSLLEPE
Sbjct: 301 VYITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLEPE 360
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG---IVAT 415
EKQKN++K +EAWRVYGALL+AAG CI+ RLKIFPPL S + K G I++T
Sbjct: 361 FNAEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSFLHKGKGKGKIIST 420
Query: 416 LSNKRKTSMD-LEEQPPLKKIAT-DGPVDAVST--SSMPTPMEEDATAATPLDNSDADHP 471
+KRK S+D E Q P K++ T DGP D V + S PM+ D DN +
Sbjct: 421 DPHKRKLSVDSSENQSPQKRLITMDGP-DGVHSQDQSGSAPMQVDNPVEN--DNPPQNSV 477
Query: 472 SPSSVQIPPDSG-SESRSKRDK--GDSQAQKLSAILPQVWKDDLNSG 515
PSS + D+ SESR+ + K G S+A + AIL Q+WKDDL+SG
Sbjct: 478 QPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSG 524
>gi|356567052|ref|XP_003551737.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Glycine max]
Length = 543
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 320/551 (58%), Positives = 419/551 (76%), Gaps = 17/551 (3%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS VPKET+EVIAQSIGI+N S+D AL+LAPD+EYRIREIMQE++KCMRHS+RT LTT+D
Sbjct: 1 MSFVPKETIEVIAQSIGITNLSSDVALSLAPDLEYRIREIMQESVKCMRHSKRTFLTTED 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRN+EP+YGF S P RF+RA G++DLFY+DDKDV+ KD++EAPLP+APLDTSI
Sbjct: 61 VDTALALRNLEPIYGFTSNDPPRFKRAAGHKDLFYIDDKDVDIKDIVEAPLPKAPLDTSI 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNE-QKDGLPVEIKLPVKHILSRELQL 176
HWLAIEGVQP IPENAPV+ I PS +E ++DGLPV++KLPVKH+++RELQL
Sbjct: 121 TSHWLAIEGVQPAIPENAPVEGIFPDLTPSEIRKSEFKEDGLPVDVKLPVKHLITRELQL 180
Query: 177 YFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALM 236
Y++KIT+L + + S+ F++ALVSL+ DSGLHPLVPYFT+FVADEV+R LNN ++LFALM
Sbjct: 181 YYEKITDLTLKKPGSIPFRRALVSLSADSGLHPLVPYFTFFVADEVARNLNNLAVLFALM 240
Query: 237 RVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRY 296
R+V +LLQN I IE YLHQLMP ++TC+VAKR+GNRL+D HWELR+F+A LV +IC+R+
Sbjct: 241 RLVRSLLQNSQIHIELYLHQLMPPIITCIVAKRIGNRLSDEHWELRNFSANLVTSICQRF 300
Query: 297 GHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 356
GH+Y+ LQ R+ KT L++ LDP +AL QHYGA++G+ ALG ++RLL+LPNL PYL LLE
Sbjct: 301 GHIYHNLQPRVMKTFLHSFLDPTKALPQHYGAIKGIEALGSRLIRLLILPNLEPYLHLLE 360
Query: 357 PEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVAT 415
PEM EKQ+NE+KRHEAW+VYGALL AAGQC+++++K F L S P + + +G V
Sbjct: 361 PEMQPEKQENEMKRHEAWQVYGALLGAAGQCVHEKVKTFGNLFSPPTQVTSRGSGKSVIA 420
Query: 416 LSNKRKTS----MDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHP 471
+ KRK S M ++ PP+KK+ TDG AV +SM M+ + + +
Sbjct: 421 MPGKRKASTVNLMQQQQLPPMKKLVTDGTGGAVPMNSMSVDMQGSTGGYSSMMGVSS--- 477
Query: 472 SPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILS 531
+ QI D + RD GD Q +K+S+ L Q WKDD+++G L+ S+ ELFGE +L
Sbjct: 478 MSMARQISND----NVPGRDIGDQQ-RKVSSTLAQAWKDDIDAGNLVSSVVELFGESVLP 532
Query: 532 FIPAPEMSLFL 542
F+P PE +FL
Sbjct: 533 FVPNPEAYMFL 543
>gi|413956298|gb|AFW88947.1| putative TATA binding protein family protein [Zea mays]
Length = 423
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 292/417 (70%), Positives = 357/417 (85%), Gaps = 2/417 (0%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKET+EVIAQS+GI + D A+ALAPDVEYR+REIMQE+IKCMRH++RT LT DD
Sbjct: 1 MSIVPKETIEVIAQSVGIPSLGADVAVALAPDVEYRLREIMQESIKCMRHAKRTVLTADD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEPVYGFASG PLRF+RA+G++DLFYLDD++V+FK++I+ PLP+APLDTS+
Sbjct: 61 VDSALGLRNVEPVYGFASGDPLRFKRAVGHKDLFYLDDREVDFKEIIDCPLPKAPLDTSV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE--QKDGLPVEIKLPVKHILSRELQLYF 178
V HWLAIEGVQP IPEN + AI P+ +E + DGLP ++KLPVKH+LSRELQ+YF
Sbjct: 121 VAHWLAIEGVQPAIPENPAIDAIVPPTENKRSEHGKDDGLPADVKLPVKHVLSRELQMYF 180
Query: 179 DKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRV 238
DKI EL +SRSD+ LFK+ALVSLA DSGLHPLVPYF+YF+ADEV+R L + +L ALMRV
Sbjct: 181 DKIAELTMSRSDTSLFKEALVSLAKDSGLHPLVPYFSYFIADEVTRSLGDLPVLLALMRV 240
Query: 239 VWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGH 298
V +LL+NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNHWELRDF+A LVA +C+R+GH
Sbjct: 241 VQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWELRDFSANLVALVCQRFGH 300
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
VY+ LQ RLTKTL++A LDP ++LTQHYGAVQG++ALGP+ +RLLLLPNL Y+ LLEPE
Sbjct: 301 VYHNLQNRLTKTLIHAFLDPAKSLTQHYGAVQGISALGPSAIRLLLLPNLVTYMQLLEPE 360
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVAT 415
+ LEKQKNE+KR EAWRVYGALL AAG+C+YDRLK+FP L S R + ++N V T
Sbjct: 361 LQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPGLLSPSMRPLLQSNKRVLT 417
>gi|356527101|ref|XP_003532152.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
isoform 1 [Glycine max]
Length = 539
Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust.
Identities = 327/550 (59%), Positives = 422/550 (76%), Gaps = 19/550 (3%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS VPKET+EVIAQSIGI+N S D ALALAPD+EYRIREIMQE++KCMRHS RT LTT+D
Sbjct: 1 MSFVPKETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESVKCMRHSMRTFLTTED 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRN+EP+YG S P +F+RA G++DLFY+DDKDV+ KD+IEAPLP+APLDTSI
Sbjct: 61 VDTALALRNLEPIYGSTSNDPPQFKRAAGHKDLFYIDDKDVDIKDIIEAPLPKAPLDTSI 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQK-DGLPVEIKLPVKHILSRELQLYFD 179
HWLAIEGVQP IPENAPV+A PS +E K DGLPV++KLPVKH+++RELQLY++
Sbjct: 121 TSHWLAIEGVQPAIPENAPVEA---PSEIRKSEYKEDGLPVDVKLPVKHLITRELQLYYE 177
Query: 180 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 239
KIT+L +++ S+ F++ALVSLATDSGLHPLVPYFT+FVADEV++ LNN ++LFALMR+V
Sbjct: 178 KITDLTLNKPGSIPFRRALVSLATDSGLHPLVPYFTFFVADEVAQNLNNLAVLFALMRLV 237
Query: 240 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHV 299
+LLQN I IE YLHQLMP ++TC+VAKR+GNRL+D+HWELR+F+A LVA+IC+R+GH+
Sbjct: 238 RSLLQNSQIHIELYLHQLMPPIITCIVAKRIGNRLSDDHWELRNFSANLVASICQRFGHI 297
Query: 300 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEM 359
Y+ LQ R+TKT L++ LDP +AL QHYGA++G+ ALG ++RLL+LPNL PYL LLEPEM
Sbjct: 298 YHNLQPRVTKTFLHSFLDPTKALPQHYGAIKGIEALGSRLIRLLILPNLEPYLHLLEPEM 357
Query: 360 LLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSN 418
EKQKNE+KRHEAW+VYGALL AAGQC+++++K+F L S P R + +G V +S
Sbjct: 358 QPEKQKNEMKRHEAWQVYGALLGAAGQCVHEKVKMFSNLFSPPTRVTSRGSGKAVIAMSG 417
Query: 419 KRKTSMD-----LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSP 473
KRK S D ++ PP+KK+ATDGP V+ +SM M + +T +
Sbjct: 418 KRKASTDNLMQQQQQLPPMKKLATDGPGGVVAMNSMLVDM-QGSTGGYSSMMGVSSMSMA 476
Query: 474 SSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFI 533
+ I G R+ GD Q +KLS+ L Q WKDD+++G L+ S+ ELFGE +L F+
Sbjct: 477 RQISIDNVPG------REVGDQQ-RKLSSTLAQAWKDDIDTGNLVSSVVELFGESVLPFV 529
Query: 534 PA-PEMSLFL 542
+ PE +FL
Sbjct: 530 VSNPEACMFL 539
>gi|356527103|ref|XP_003532153.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
isoform 2 [Glycine max]
Length = 545
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 327/553 (59%), Positives = 422/553 (76%), Gaps = 19/553 (3%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS VPKET+EVIAQSIGI+N S D ALALAPD+EYRIREIMQE++KCMRHS RT LTT+D
Sbjct: 1 MSFVPKETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESVKCMRHSMRTFLTTED 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRN+EP+YG S P +F+RA G++DLFY+DDKDV+ KD+IEAPLP+APLDTSI
Sbjct: 61 VDTALALRNLEPIYGSTSNDPPQFKRAAGHKDLFYIDDKDVDIKDIIEAPLPKAPLDTSI 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK-DGLPVEIKLPVKHILSRELQL 176
HWLAIEGVQP IPENAPV+ I PS +E K DGLPV++KLPVKH+++RELQL
Sbjct: 121 TSHWLAIEGVQPAIPENAPVEGIFTDLTPSEIRKSEYKEDGLPVDVKLPVKHLITRELQL 180
Query: 177 YFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALM 236
Y++KIT+L +++ S+ F++ALVSLATDSGLHPLVPYFT+FVADEV++ LNN ++LFALM
Sbjct: 181 YYEKITDLTLNKPGSIPFRRALVSLATDSGLHPLVPYFTFFVADEVAQNLNNLAVLFALM 240
Query: 237 RVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRY 296
R+V +LLQN I IE YLHQLMP ++TC+VAKR+GNRL+D+HWELR+F+A LVA+IC+R+
Sbjct: 241 RLVRSLLQNSQIHIELYLHQLMPPIITCIVAKRIGNRLSDDHWELRNFSANLVASICQRF 300
Query: 297 GHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 356
GH+Y+ LQ R+TKT L++ LDP +AL QHYGA++G+ ALG ++RLL+LPNL PYL LLE
Sbjct: 301 GHIYHNLQPRVTKTFLHSFLDPTKALPQHYGAIKGIEALGSRLIRLLILPNLEPYLHLLE 360
Query: 357 PEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVAT 415
PEM EKQKNE+KRHEAW+VYGALL AAGQC+++++K+F L S P R + +G V
Sbjct: 361 PEMQPEKQKNEMKRHEAWQVYGALLGAAGQCVHEKVKMFSNLFSPPTRVTSRGSGKAVIA 420
Query: 416 LSNKRKTSMD-----LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADH 470
+S KRK S D ++ PP+KK+ATDGP V+ +SM M + +T +
Sbjct: 421 MSGKRKASTDNLMQQQQQLPPMKKLATDGPGGVVAMNSMLVDM-QGSTGGYSSMMGVSSM 479
Query: 471 PSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGIL 530
+ I G R+ GD Q +KLS+ L Q WKDD+++G L+ S+ ELFGE +L
Sbjct: 480 SMARQISIDNVPG------REVGDQQ-RKLSSTLAQAWKDDIDTGNLVSSVVELFGESVL 532
Query: 531 SFIPA-PEMSLFL 542
F+ + PE +FL
Sbjct: 533 PFVVSNPEACMFL 545
>gi|168019548|ref|XP_001762306.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686384|gb|EDQ72773.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 525
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 307/544 (56%), Positives = 397/544 (72%), Gaps = 21/544 (3%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPK+T+ VIAQSIGI+N D A LAPDVEYR+REIMQEA+KCMRHS+R+ LTTDD
Sbjct: 1 MSIVPKDTIHVIAQSIGIANLHDDVAKELAPDVEYRMREIMQEAVKCMRHSKRSILTTDD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
V+ AL LRNVEP+YGFASG PLRFRRA+G+ DLFY++D+D+EFK+V+EAPLP+APLD S+
Sbjct: 61 VNSALSLRNVEPLYGFASGDPLRFRRALGHSDLFYVEDRDLEFKEVVEAPLPKAPLDASV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNN--EQKDGLPVEIKLPVKHILSRELQLYF 178
V HWLA+EGVQP IPENAP++ +A P+ + D +++K PVKH+LS+ELQLYF
Sbjct: 121 VAHWLAVEGVQPAIPENAPIEVLAPPTETKKEGPRKDDESAIDVKPPVKHVLSKELQLYF 180
Query: 179 DKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRV 238
+K+TEL V+ +D+ L + ALVSLATDSGLHPLVPYFT FVADEV+R L+++ LLF+LMR+
Sbjct: 181 EKMTELVVTGADTQLLRDALVSLATDSGLHPLVPYFTQFVADEVTRSLDDFPLLFSLMRL 240
Query: 239 VWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGH 298
V +LL NPHI IEPYLHQ+MPSV+TCLVAKRLG + NHWELRDFTA LVA ICKR+GH
Sbjct: 241 VQSLLLNPHIHIEPYLHQMMPSVITCLVAKRLGGKGIVNHWELRDFTASLVAFICKRFGH 300
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
VY+ LQ R+T+TLL+A LDPK+ALTQHYGA++GLAALG VVRL++LPNL YL LL PE
Sbjct: 301 VYHNLQGRVTRTLLHAFLDPKKALTQHYGAIRGLAALGSRVVRLVVLPNLELYLRLLAPE 360
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVATLSN 418
+ E Q+NE+KR+EAWRVYGAL A+G C+Y++LK L +R K+ VAT +
Sbjct: 361 LSPETQQNEMKRYEAWRVYGALQTASGACMYEKLKAQSFLLPSSSRVALKSTARVATTNG 420
Query: 419 KRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQI 478
K ++S+ P +KK+ G + ++ + + L + ++ S Q
Sbjct: 421 KLRSSI-----PKMKKVYYGGHLKTEASGNCDGYFTKKKDRCGGLGAASSEKTSLRHRQF 475
Query: 479 PPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEM 538
+ G + R R+ WK+D + G LL SL +LFGEG+L FIP+ E+
Sbjct: 476 DSNRGKKFRWSRE--------------HSWKEDGDVGPLLASLVDLFGEGMLPFIPSKEL 521
Query: 539 SLFL 542
S F+
Sbjct: 522 SSFI 525
>gi|449523135|ref|XP_004168580.1| PREDICTED: transcription initiation factor TFIID subunit 6-like,
partial [Cucumis sativus]
Length = 439
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 305/440 (69%), Positives = 356/440 (80%), Gaps = 4/440 (0%)
Query: 106 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLP 165
VI+APLP+APLD ++ CHWLAIEGVQP IPENAPV+ I PS+ ++EQKD +PV+IKLP
Sbjct: 1 VIDAPLPKAPLDAAVFCHWLAIEGVQPAIPENAPVEVILPPSDTKSSEQKDEVPVDIKLP 60
Query: 166 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 225
VKHILS+ELQLYFDKITEL VSRS + LFK+ALVSLATDSGLHPLVPYFT ++ADEV+RG
Sbjct: 61 VKHILSKELQLYFDKITELVVSRSSTDLFKKALVSLATDSGLHPLVPYFTCYIADEVARG 120
Query: 226 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 285
L +YSLLFALMRVVW+LLQNPHI IEPYLHQ+MPSVVTCLVAKRLG+R +DNHWELRDFT
Sbjct: 121 LGDYSLLFALMRVVWSLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGSRFSDNHWELRDFT 180
Query: 286 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 345
AK+VA ICKR+GHVYNTLQT+LTKTLLNA LDPKR+LTQHYGA++GLAALG NVV LL+L
Sbjct: 181 AKVVALICKRFGHVYNTLQTKLTKTLLNAFLDPKRSLTQHYGAIRGLAALGMNVVHLLIL 240
Query: 346 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARS 405
PNL PYL LLEPEMLL QKNE+KRHEAW VYGALL+A GQCIY+R+KIFPPL S PA S
Sbjct: 241 PNLEPYLGLLEPEMLLANQKNEMKRHEAWHVYGALLRAVGQCIYERIKIFPPLLSTPAGS 300
Query: 406 VWKTNG--IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATP 462
V +TN I T NKRK + D LE QPPLK+++ DGP+ + T+S + ME A
Sbjct: 301 VLRTNARTITTTFPNKRKANADYLEGQPPLKRMSIDGPMGVMLTNSSASHMEGTVVPAAS 360
Query: 463 LDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLF 522
NS+ P+ S S S S++ K D Q K SA+L QVWK+DLNSGKLL S+
Sbjct: 361 -GNSNLVSPTSSGQMQNEAISSGSTSRKGKHDDQILKKSAVLSQVWKEDLNSGKLLTSML 419
Query: 523 ELFGEGILSFIPAPEMSLFL 542
+LFGE + FIPAPE+SLFL
Sbjct: 420 DLFGESMFCFIPAPELSLFL 439
>gi|449463755|ref|XP_004149597.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cucumis sativus]
gi|449503215|ref|XP_004161891.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cucumis sativus]
Length = 535
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 303/552 (54%), Positives = 400/552 (72%), Gaps = 27/552 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS++PKE++E++AQSIGISN S + ALAL PDVEYR+REIMQEA+KCMRHS+RT L++ D
Sbjct: 1 MSVIPKESIEIVAQSIGISNLSPEVALALTPDVEYRVREIMQEAVKCMRHSKRTVLSSSD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD ALKLRN+EP+YGFA+ LRF+RA G++DLFY+DDKDVE +VIE+PL +A +DTS+
Sbjct: 61 VDNALKLRNLEPIYGFAACDSLRFKRAAGHKDLFYIDDKDVELNNVIESPLAKATVDTSV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDG-LPVEIKLPVKHILSRELQLYFD 179
HWLA+EGVQP +PE+ + P +G ++ K+ LP + K P KH++SR+LQLYF+
Sbjct: 121 ATHWLAVEGVQPAVPESLLTEE---PHDGKKSDLKEEELPYDSKAPTKHVISRDLQLYFE 177
Query: 180 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 239
KIT L +++S S+L ++AL LA DSG+ PL+PYFT F+ADEVS+ L N LL ALMR+V
Sbjct: 178 KITGLILNKSGSILIREALRCLAVDSGIQPLLPYFTCFIADEVSKNLCNCQLLIALMRMV 237
Query: 240 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHV 299
W LL+NP I + PYLHQLMPS++TCLVAK+LG RL+DNHWELRD A LV+ ICKR+GHV
Sbjct: 238 WCLLRNPQIHMAPYLHQLMPSIITCLVAKQLGKRLSDNHWELRDLAASLVSLICKRFGHV 297
Query: 300 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEM 359
Y+ +Q R+TKTLL+ LDP + L QHYGAV+GLA LGP+VVR +LPNL PY+ LE
Sbjct: 298 YHNIQPRVTKTLLHVFLDPSKLLPQHYGAVRGLADLGPDVVRQFILPNLEPYMQYLE--- 354
Query: 360 LLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSL--PARSVWKTNG-----I 412
+EKQKNE++RHEAW+V+ LL AAG+C++ LK+FP SL P RS K N +
Sbjct: 355 -MEKQKNEMRRHEAWQVHRTLLDAAGKCMHGWLKVFPLSLSLSPPMRSTSKINANINGKV 413
Query: 413 VATLSNKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEEDATAA-TPLDNSDADH 470
V T+SNKRK +D +QP LKK+ATD + A+ +SM M+ T TPL S+
Sbjct: 414 VKTISNKRKAILDDSVQQPALKKMATDSTLGAIPMNSMMVDMQGATTGLPTPLGGSN--- 470
Query: 471 PSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGIL 530
+ + + +E+R R+ K S L WK+DL++G L+ SLF+LFGE +
Sbjct: 471 -----ISVARNFPNETRPGRE--GELGFKGSTALAIAWKEDLDAGPLITSLFQLFGEDLF 523
Query: 531 SFIPAPEMSLFL 542
SFIP PE+S FL
Sbjct: 524 SFIPKPELSFFL 535
>gi|357459811|ref|XP_003600186.1| TATA binding protein-associated factor-like protein [Medicago
truncatula]
gi|355489234|gb|AES70437.1| TATA binding protein-associated factor-like protein [Medicago
truncatula]
Length = 510
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 310/542 (57%), Positives = 402/542 (74%), Gaps = 32/542 (5%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS++PKE++EVIAQ++GI+N S+D ALAL+PD+EYRIREIMQE+IKCMRHS RT LTTDD
Sbjct: 1 MSVIPKESIEVIAQTLGINNLSSDVALALSPDLEYRIREIMQESIKCMRHSMRTFLTTDD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D AL LRN+EP+YGFAS P RF++A G+ DLFY+DDKDV+ KD++EA LP+APLDTSI
Sbjct: 61 FDTALALRNLEPIYGFASNDPPRFKKAAGHNDLFYIDDKDVDIKDLVEADLPKAPLDTSI 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
HWLAIEGVQP IPENAP +A N E D LPV+IKLPVKH+++ ELQLY++K
Sbjct: 121 TSHWLAIEGVQPAIPENAPPEASTEIKNSEYKE--DRLPVDIKLPVKHVITTELQLYYEK 178
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
I EL +++S S+LF++ALV+LATDSGLHPLVPYFT FVADEV+R LNN ++LFALMR+V
Sbjct: 179 IIELILNKSGSILFRRALVTLATDSGLHPLVPYFTRFVADEVARNLNNLNILFALMRLVR 238
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVY 300
+LLQNPHI IE YLHQLMP ++TC+VAKR+GNRL+DNHWELRDF+A LVA ICKR+GH+Y
Sbjct: 239 SLLQNPHIHIELYLHQLMPPIITCIVAKRIGNRLSDNHWELRDFSANLVALICKRFGHMY 298
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ LQ R+TKT L+ LDP +AL QHYGA++G+AALG +VRLL+LPNL PYL LLEPE
Sbjct: 299 HNLQPRVTKTFLHTFLDPTKALPQHYGAIKGIAALGSRLVRLLILPNLEPYLHLLEPEKQ 358
Query: 361 LEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVATLSNKR 420
LEKQKNE+KR EAW+VYGALL A GQ +++++K F L S +R+ NG K
Sbjct: 359 LEKQKNEIKRQEAWQVYGALLCAVGQNMHEKVKRFSSLLSPQSRATSSGNG-------KA 411
Query: 421 KTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPP 480
+M P + + P++++S +M + +T+ P ++ S +
Sbjct: 412 MIAM-----PGVSGVV--APMNSMSVDNM-----QGSTSGFPTMMGVSNSSVGMSSSMGR 459
Query: 481 DSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSL 540
+E+ + S+IL Q WKDD+++G+LL +FELFGE +LSFIP P+ +
Sbjct: 460 QLSNENNTS-----------SSILAQAWKDDIDAGQLLPPVFELFGESLLSFIPKPQAFI 508
Query: 541 FL 542
FL
Sbjct: 509 FL 510
>gi|302806890|ref|XP_002985176.1| hypothetical protein SELMODRAFT_234732 [Selaginella moellendorffii]
gi|300147004|gb|EFJ13670.1| hypothetical protein SELMODRAFT_234732 [Selaginella moellendorffii]
Length = 484
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 308/543 (56%), Positives = 375/543 (69%), Gaps = 67/543 (12%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKET+ VIAQSIGISN D A ALAPDVEYR+REIMQEAIKCMRHS+R+ LTTDD
Sbjct: 1 MSIVPKETIHVIAQSIGISNLHDDVAAALAPDVEYRMREIMQEAIKCMRHSKRSVLTTDD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
V+ AL LRNVEP+YGFASG PLRFRRA+G+ DLF++DD++++ K++ EAPL +APLDT++
Sbjct: 61 VNTALSLRNVEPLYGFASGDPLRFRRAVGHSDLFFIDDRELDCKEITEAPLTKAPLDTAV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE----QKDGLPVEIKLPVKHILSRELQL 176
+ HWLAIEG+QP IPEN P+ ++AP ++ + D + V++KLPVKH+LSRELQL
Sbjct: 121 MAHWLAIEGIQPAIPENVPIDPLSAPPEVKKSDIPGLKPDQMTVDLKLPVKHVLSRELQL 180
Query: 177 YFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALM 236
YF+KITEL V+ +D VL K SLATDSGLHPLVPYFT F+ADEV+RGLN+ LLF+LM
Sbjct: 181 YFEKITELIVTGADDVLLKDVFASLATDSGLHPLVPYFTQFIADEVTRGLNDLPLLFSLM 240
Query: 237 RVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRY 296
RV +LL NPHI IEPYLHQLMPSVVTCLVAKRLG + NHWELRDFTA L+A ICKR+
Sbjct: 241 RVARSLLLNPHIHIEPYLHQLMPSVVTCLVAKRLGGKNFVNHWELRDFTATLIAFICKRF 300
Query: 297 GHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 356
GH Y LQTR+TKTLL+A LDPKRA+TQHYGAV+G+AALG +VRLL+LPNL Y++LL
Sbjct: 301 GHAYYNLQTRVTKTLLHAFLDPKRAMTQHYGAVKGIAALGSKLVRLLILPNLEVYINLLL 360
Query: 357 PEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVATL 416
PEM + Q NE+KR+EA RVYGAL AAG CIY+ L+ PP PA + +
Sbjct: 361 PEMSSQDQANELKRYEAIRVYGALQAAAGNCIYEMLQSAPPSKKKPANN--------KSQ 412
Query: 417 SNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSV 476
S RK D +SM EED
Sbjct: 413 STTRK--------------------DVDGDASM---HEEDGA------------------ 431
Query: 477 QIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAP 536
D E +R + S+A WK+D+ G L+ SL +LFGEG+L FIP
Sbjct: 432 ----DDKDEGVKRRRRALSEA----------WKEDVEVGDLINSLVDLFGEGMLPFIPMR 477
Query: 537 EMS 539
EMS
Sbjct: 478 EMS 480
>gi|302772845|ref|XP_002969840.1| hypothetical protein SELMODRAFT_146848 [Selaginella moellendorffii]
gi|300162351|gb|EFJ28964.1| hypothetical protein SELMODRAFT_146848 [Selaginella moellendorffii]
Length = 484
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 307/543 (56%), Positives = 374/543 (68%), Gaps = 67/543 (12%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSIVPKET+ VIAQSIGISN D A ALAPDVEYR+REIMQEAIKCMRHS+R+ LTTDD
Sbjct: 1 MSIVPKETIHVIAQSIGISNLHDDVAAALAPDVEYRMREIMQEAIKCMRHSKRSVLTTDD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
V+ AL LRNVEP+YGFASG PLRFRRA+G+ DLF++DD++++ K++ EAPL +APLDT++
Sbjct: 61 VNTALSLRNVEPLYGFASGDPLRFRRAVGHSDLFFIDDRELDCKEITEAPLTKAPLDTAV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE----QKDGLPVEIKLPVKHILSRELQL 176
+ HWLAIEG+QP IPEN P+ ++AP ++ + D + V++KLPVKH+LSRELQL
Sbjct: 121 MAHWLAIEGIQPAIPENVPIDPLSAPPEVKKSDIPGLKPDQMTVDLKLPVKHVLSRELQL 180
Query: 177 YFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALM 236
YF+KITEL V+ +D VL K SLATDSGLHPLVPYFT F+ADEV+RGLN+ LLF+LM
Sbjct: 181 YFEKITELIVTGADDVLLKDVFASLATDSGLHPLVPYFTQFIADEVTRGLNDLPLLFSLM 240
Query: 237 RVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRY 296
RV +LL NPHI IEPYLHQLMPSVVTCLVAKRLG + NHWELRDFTA L+A ICKR+
Sbjct: 241 RVARSLLLNPHIHIEPYLHQLMPSVVTCLVAKRLGGKNFVNHWELRDFTATLIAFICKRF 300
Query: 297 GHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 356
GH Y LQTR+TKTLL+A LDPKRA+TQHYGAV+G+AALG +VRLL+LPNL Y++LL
Sbjct: 301 GHAYYNLQTRVTKTLLHAFLDPKRAMTQHYGAVKGIAALGSKLVRLLILPNLEVYINLLL 360
Query: 357 PEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVATL 416
PEM + Q NE+KR+EA RVYGAL AAG CIY+ L+ PP PA + +
Sbjct: 361 PEMSSQDQANELKRYEAIRVYGALQAAAGNCIYEMLQSAPPSRKKPANN--------KSQ 412
Query: 417 SNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSV 476
S RK D +SM EED
Sbjct: 413 STTRK--------------------DVDGDASM---HEEDGA------------------ 431
Query: 477 QIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAP 536
D E +R + S+A WK+D+ G L+ SL +LFGE +L FIP
Sbjct: 432 ----DDKDEGVKRRRRALSEA----------WKEDVEVGDLINSLVDLFGEEMLPFIPMR 477
Query: 537 EMS 539
EMS
Sbjct: 478 EMS 480
>gi|255580776|ref|XP_002531209.1| transcription initiation factor tfiid, putative [Ricinus communis]
gi|223529211|gb|EEF31186.1| transcription initiation factor tfiid, putative [Ricinus communis]
Length = 468
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 303/476 (63%), Positives = 372/476 (78%), Gaps = 11/476 (2%)
Query: 70 VEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEG 129
++PVYG ASG PLRF+RA GY+DL+Y+DDKDVEFKDV+EAPLP+APLDTSI HWLAIEG
Sbjct: 1 MQPVYGLASGDPLRFKRAAGYKDLYYIDDKDVEFKDVVEAPLPKAPLDTSISVHWLAIEG 60
Query: 130 VQPVIPENAPVQAIAAPSNGTNNEQK-DGLPVEIKLPVKHILSRELQLYFDKITELAVSR 188
VQP IPENAPV+A S+G +E K DGLPV++KLPVKH+LSRELQLYFDKITEL + +
Sbjct: 61 VQPAIPENAPVEA---SSDGKKSEYKEDGLPVDVKLPVKHVLSRELQLYFDKITELTMRK 117
Query: 189 SDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHI 248
SDS+LFKQAL SLATDSGLHPLVPYF Y +ADEV+R LNN+S+LFALMRV +LLQNPHI
Sbjct: 118 SDSILFKQALSSLATDSGLHPLVPYFIYLIADEVARNLNNFSVLFALMRVARSLLQNPHI 177
Query: 249 QIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 308
+EPYLHQLMPS++TCLVAKR GNR DNH ELRDFTA LVA+ICKR+GHVY+ LQ R+T
Sbjct: 178 HVEPYLHQLMPSIITCLVAKRSGNRFCDNHLELRDFTANLVASICKRFGHVYHNLQPRVT 237
Query: 309 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEV 368
+TLL+ LDP ++L QHYGA+QGLAALGPNVVRLL+LPNL PYL LLEPEMLLEKQKNE+
Sbjct: 238 RTLLHTFLDPLKSLPQHYGAIQGLAALGPNVVRLLILPNLEPYLLLLEPEMLLEKQKNEM 297
Query: 369 KRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSNKRKTSMD-L 426
+RHEAW VYGAL++AAG C++DR+K P + P R+VWK++G ++ T+ NKRK S D L
Sbjct: 298 RRHEAWSVYGALMRAAGLCMHDRMKRLPGVLMPPTRAVWKSSGRLMTTVPNKRKASSDNL 357
Query: 427 EEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSES 486
+QPPLKK+ATDGP+ + +SM M+ + S S Q+P +E+
Sbjct: 358 IQQPPLKKLATDGPMGVIPMNSMHVDMQGATGGYHTASGASGMSISSMSRQLP----NEN 413
Query: 487 RSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 542
RD + K+ +L + WK+D+++G LL SL ELFGE + F P PE+S FL
Sbjct: 414 MPGRDI-SGRVSKVLPVLARAWKEDMDAGHLLASLNELFGESMSCFAPKPELSFFL 468
>gi|356567236|ref|XP_003551827.1| PREDICTED: uncharacterized protein LOC100803416 [Glycine max]
Length = 440
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 281/403 (69%), Positives = 323/403 (80%), Gaps = 8/403 (1%)
Query: 143 IAAPSNGTNNEQKD-GLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSL 201
I+APS+ +EQKD LPV+IKLPVKH+LSRELQLYFDK+ EL +S S+SVLFK+ALVSL
Sbjct: 43 ISAPSDVKKHEQKDDNLPVDIKLPVKHVLSRELQLYFDKVAELTLSESESVLFKEALVSL 102
Query: 202 ATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 261
ATDSGLHPLVPYFT F+ADEVSRGLNNY LLFALMRVV +LLQNPHI IEPYLHQLMPSV
Sbjct: 103 ATDSGLHPLVPYFTCFIADEVSRGLNNYPLLFALMRVVSSLLQNPHIHIEPYLHQLMPSV 162
Query: 262 VTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 321
VTCLVAKRLG+RLADNHWELRD TA LVA+ICKR+GHVY+ LQ+RLTKTLLNA LDPK+A
Sbjct: 163 VTCLVAKRLGSRLADNHWELRDSTANLVASICKRFGHVYSNLQSRLTKTLLNAFLDPKKA 222
Query: 322 LTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 381
LTQHYGA+QGL ALGPNVVRLLLLPNL Y+ LLEPEMLLE QKNE+KRHEAW VYGALL
Sbjct: 223 LTQHYGAIQGLGALGPNVVRLLLLPNLETYMRLLEPEMLLEMQKNEMKRHEAWLVYGALL 282
Query: 382 QAAGQCIYDRLKIFPPLSSLPARSVWKTNG--IVATLSNKRKTSMDLEEQPPLKKIATDG 439
+AAGQCIYDRLKIFP S P +VWKTN + +TL ++ + LE+QPPLKK ATDG
Sbjct: 283 RAAGQCIYDRLKIFPTFPSPPLHAVWKTNAKVLTSTLDKRKASPEQLEQQPPLKKAATDG 342
Query: 440 PVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQK 499
+ M EE T A+ D+ S S+ Q+ ++ + + + GD+QA K
Sbjct: 343 ---EIGVDLMNHEQEEAGTQASSADSIIGS--SSSNTQMKNETTLDGEVRSNGGDTQALK 397
Query: 500 LSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 542
SA L QVWKD+LNSG+ LVSLFELFGEGILSFI APEM +FL
Sbjct: 398 TSAALTQVWKDELNSGRTLVSLFELFGEGILSFIQAPEMYMFL 440
>gi|242044226|ref|XP_002459984.1| hypothetical protein SORBIDRAFT_02g020250 [Sorghum bicolor]
gi|241923361|gb|EER96505.1| hypothetical protein SORBIDRAFT_02g020250 [Sorghum bicolor]
Length = 446
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/446 (60%), Positives = 348/446 (78%), Gaps = 5/446 (1%)
Query: 101 VEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE--QKDGL 158
V +IEAPLP+APLDTS+V HWLAIEGVQP IPEN + AI P+ +E + DGL
Sbjct: 2 VGVMQIIEAPLPKAPLDTSVVAHWLAIEGVQPAIPENPAIDAIVPPTENKRSEHGKDDGL 61
Query: 159 PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV 218
PV+IKLPVKH+LSRELQ+YFDKI EL +SRSD+ LFK+ALVSLA DSGLHPLVPYF+YF+
Sbjct: 62 PVDIKLPVKHVLSRELQMYFDKIAELTMSRSDTSLFKEALVSLAKDSGLHPLVPYFSYFI 121
Query: 219 ADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNH 278
ADEV+R L + +LFALMRVV +LL+NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNH
Sbjct: 122 ADEVTRSLGDLPVLFALMRVVQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNH 181
Query: 279 WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPN 338
WELRDF+A LVA++C+R+GHVY+ LQ RLTKTL++A LDP ++LTQHYGAVQG++ALGP+
Sbjct: 182 WELRDFSANLVASVCRRFGHVYHNLQNRLTKTLIHAFLDPAKSLTQHYGAVQGISALGPS 241
Query: 339 VVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPL 398
+RLLLLPNL Y+ LLEPE+ LEKQKNE+KR EAWRVYGALL AAG+C+YDRLK+FP L
Sbjct: 242 AIRLLLLPNLVTYMQLLEPELQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPGL 301
Query: 399 SSLPARSVWKTNGIVATLS-NKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEED 456
S R + ++N V+T + NKRK+S +L QPPLKK+ATD ++++++SM M +
Sbjct: 302 LSPSMRPLLRSNKRVSTNNPNKRKSSTNLSATQPPLKKMATDATANSMASASMGGNM-QG 360
Query: 457 ATAATPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGK 516
A P ++ SS +S + +RD+G AQ++SA+L Q WK+D ++G
Sbjct: 361 AMDGFPNQLANPGMMQASSSGQIVESIPSAVIRRDQGSDLAQRVSAVLRQAWKEDQDTGH 420
Query: 517 LLVSLFELFGEGILSFIPAPEMSLFL 542
LL SL+++FGE I SF+ PE+SLF+
Sbjct: 421 LLGSLYDVFGEAIFSFVQPPEISLFV 446
>gi|42495554|gb|AAS17938.1| TATA binding protein associated factor 6b isoform 1 [Arabidopsis
thaliana]
Length = 504
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 294/546 (53%), Positives = 373/546 (68%), Gaps = 48/546 (8%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
+V KE++EVIAQSIG+S S D + ALAPDVEYR+RE+MQEAIKCMRH+RRTTL DVD
Sbjct: 1 MVTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHDVD 60
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
AL RN+EP G S +RF+RA RDL++ DDKDVE K+VIEAPLP AP D S+
Sbjct: 61 SALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFS 117
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
HWLAI+G+QP IP+N+P+QAI S+ +E KD L + +LS++LQ+YFDK+T
Sbjct: 118 HWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD-----GLAARQVLSKDLQIYFDKVT 169
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
E A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++NY +L ALMR+ +L
Sbjct: 170 EWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLARSL 229
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNT 302
L NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA VA+ CKR+GHVY+
Sbjct: 230 LHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHVYHN 289
Query: 303 LQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLE 362
L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPNLGPYL LL PEM LE
Sbjct: 290 LLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEMGLE 349
Query: 363 KQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSNKRK 421
KQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVWKTNG + + +KRK
Sbjct: 350 KQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVWKTNGKLTSPRQSKRK 409
Query: 422 TSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLD-NSDAD---HPSPSSV 476
S D L QPPLKKIA G + ST M+ T P ++DAD H SPS+
Sbjct: 410 ASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQSHTDADARHHNSPST- 463
Query: 477 QIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAP 536
I P + + + + D L LFE FGE +L F P
Sbjct: 464 -IAPKTSAAAGTDVDN------------------------YLFPLFEYFGESMLMFTPTH 498
Query: 537 EMSLFL 542
E+S FL
Sbjct: 499 ELSFFL 504
>gi|334183297|ref|NP_175838.3| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194963|gb|AEE33084.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 504
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 294/546 (53%), Positives = 373/546 (68%), Gaps = 48/546 (8%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
+V KE++EVIAQSIG+S S D + ALAPDVEYR+RE+MQEAIKCMRH+RRTTL DVD
Sbjct: 1 MVTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHDVD 60
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
AL RN+EP G S +RF+RA RDL++ DDKDVE K+VIEAPLP AP D S+
Sbjct: 61 SALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFL 117
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
HWLAI+G+QP IP+N+P+QAI S+ +E KD L + +LS++LQ+YFDK+T
Sbjct: 118 HWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD-----GLAARQVLSKDLQIYFDKVT 169
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
E A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++NY +L ALMR+ +L
Sbjct: 170 EWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLARSL 229
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNT 302
L NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA VA+ CKR+GHVY+
Sbjct: 230 LHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHVYHN 289
Query: 303 LQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLE 362
L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPNLGPYL LL PEM LE
Sbjct: 290 LLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEMGLE 349
Query: 363 KQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSNKRK 421
KQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVWKTNG + + +KRK
Sbjct: 350 KQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVWKTNGKLTSPRQSKRK 409
Query: 422 TSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLD-NSDAD---HPSPSSV 476
S D L QPPLKKIA G + ST M+ T P ++DAD H SPS+
Sbjct: 410 ASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQSHTDADARHHNSPST- 463
Query: 477 QIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAP 536
I P + + + + D L LFE FGE +L F P
Sbjct: 464 -IAPKTSAAAGTDVDN------------------------YLFPLFEYFGESMLMFTPTH 498
Query: 537 EMSLFL 542
E+S FL
Sbjct: 499 ELSFFL 504
>gi|42495556|gb|AAS17939.1| TATA binding protein associated factor 6b isoform 2 [Arabidopsis
thaliana]
Length = 497
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 292/547 (53%), Positives = 367/547 (67%), Gaps = 57/547 (10%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
+V KE++EVIAQSIG+S S D + ALAPDVEYR+RE+MQEAIKCMRH+RRTTL DVD
Sbjct: 1 MVTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHDVD 60
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
AL RN+EP G S +RF+RA RDL++ DDKDVE K+VIEAPLP AP D S+
Sbjct: 61 SALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFS 117
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD-GLPVEIKLPVKHILSRELQLYFDKI 181
HWLAI+G+QP IP+N+P+QAI S+ +E KD GL Q+YFDK+
Sbjct: 118 HWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDDGLAAR-------------QIYFDKV 161
Query: 182 TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWN 241
TE A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++NY +L ALMR+ +
Sbjct: 162 TEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLARS 221
Query: 242 LLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYN 301
LL NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA VA+ CKR+GHVY+
Sbjct: 222 LLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHVYH 281
Query: 302 TLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLL 361
L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPNLGPYL LL PEM L
Sbjct: 282 NLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEMGL 341
Query: 362 EKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSNKR 420
EKQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVWKTNG + + +KR
Sbjct: 342 EKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVWKTNGKLTSPRQSKR 401
Query: 421 KTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL-DNSDAD---HPSPSS 475
K S D L QPPLKKIA G + ST M+ T P ++DAD H SPS+
Sbjct: 402 KASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQSHTDADARHHNSPST 456
Query: 476 VQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPA 535
I P + + + + D L LFE FGE +L F P
Sbjct: 457 --IAPKTSAAAGTDVDN------------------------YLFPLFEYFGESMLMFTPT 490
Query: 536 PEMSLFL 542
E+S FL
Sbjct: 491 HELSFFL 497
>gi|334183299|ref|NP_001031187.2| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194965|gb|AEE33086.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 497
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 292/547 (53%), Positives = 367/547 (67%), Gaps = 57/547 (10%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
+V KE++EVIAQSIG+S S D + ALAPDVEYR+RE+MQEAIKCMRH+RRTTL DVD
Sbjct: 1 MVTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHDVD 60
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
AL RN+EP G S +RF+RA RDL++ DDKDVE K+VIEAPLP AP D S+
Sbjct: 61 SALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFL 117
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD-GLPVEIKLPVKHILSRELQLYFDKI 181
HWLAI+G+QP IP+N+P+QAI S+ +E KD GL Q+YFDK+
Sbjct: 118 HWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDDGLAAR-------------QIYFDKV 161
Query: 182 TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWN 241
TE A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++NY +L ALMR+ +
Sbjct: 162 TEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLARS 221
Query: 242 LLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYN 301
LL NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA VA+ CKR+GHVY+
Sbjct: 222 LLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHVYH 281
Query: 302 TLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLL 361
L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPNLGPYL LL PEM L
Sbjct: 282 NLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEMGL 341
Query: 362 EKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSNKR 420
EKQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVWKTNG + + +KR
Sbjct: 342 EKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVWKTNGKLTSPRQSKR 401
Query: 421 KTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL-DNSDAD---HPSPSS 475
K S D L QPPLKKIA G + ST M+ T P ++DAD H SPS+
Sbjct: 402 KASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQSHTDADARHHNSPST 456
Query: 476 VQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPA 535
I P + + + + D L LFE FGE +L F P
Sbjct: 457 --IAPKTSAAAGTDVDN------------------------YLFPLFEYFGESMLMFTPT 490
Query: 536 PEMSLFL 542
E+S FL
Sbjct: 491 HELSFFL 497
>gi|334183298|ref|NP_974024.2| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194964|gb|AEE33085.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 527
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 294/569 (51%), Positives = 373/569 (65%), Gaps = 71/569 (12%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQ-------------------- 42
+V KE++EVIAQSIG+S S D + ALAPDVEYR+RE+MQ
Sbjct: 1 MVTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQVYHQLQLYFCPLISSLTCRR 60
Query: 43 ---EAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDK 99
EAIKCMRH+RRTTL DVD AL RN+EP G S +RF+RA RDL++ DDK
Sbjct: 61 NLQEAIKCMRHARRTTLMAHDVDSALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDK 117
Query: 100 DVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLP 159
DVE K+VIEAPLP AP D S+ HWLAI+G+QP IP+N+P+QAI S+ +E KD
Sbjct: 118 DVELKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD-- 172
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
L + +LS++LQ+YFDK+TE A+++S S LF+QAL SL D GLHPLVP+FT F+A
Sbjct: 173 ---GLAARQVLSKDLQIYFDKVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIA 229
Query: 220 DEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHW 279
+E+ + ++NY +L ALMR+ +LL NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW
Sbjct: 230 EEIVKNMDNYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHW 289
Query: 280 ELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNV 339
+LR+FTA VA+ CKR+GHVY+ L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+
Sbjct: 290 DLRNFTASTVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNM 349
Query: 340 VRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLS 399
VR L+LPNLGPYL LL PEM LEKQK E KRH AW VYGAL+ AAG+C+Y+RLK L
Sbjct: 350 VRFLVLPNLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLL 409
Query: 400 SLPARSVWKTNG-IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDA 457
S P SVWKTNG + + +KRK S D L QPPLKKIA G + ST M+
Sbjct: 410 SPPTSSVWKTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRG 464
Query: 458 TAATPLD-NSDAD---HPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLN 513
T P ++DAD H SPS+ I P + + + + D
Sbjct: 465 TTTVPQQSHTDADARHHNSPST--IAPKTSAAAGTDVDN--------------------- 501
Query: 514 SGKLLVSLFELFGEGILSFIPAPEMSLFL 542
L LFE FGE +L F P E+S FL
Sbjct: 502 ---YLFPLFEYFGESMLMFTPTHELSFFL 527
>gi|449529832|ref|XP_004171902.1| PREDICTED: transcription initiation factor TFIID subunit 6-like,
partial [Cucumis sativus]
Length = 294
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 237/294 (80%), Positives = 269/294 (91%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSI+PKE +EVIAQ IGI+N S+D AL +APDVEYR+REIMQEAIKCMRHS+RTTLT +D
Sbjct: 1 MSIIPKENIEVIAQCIGINNLSSDVALDIAPDVEYRLREIMQEAIKCMRHSKRTTLTAND 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
VD AL LRNVEP+YGFASGGPLRF+RAIG+RDLFYL+DKD+EFKD+I+APLP+AP DT++
Sbjct: 61 VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDIIDAPLPKAPFDTAV 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
CHWLAIEGVQP IPENAPV+ I PS+ +NEQ GLPV+IKLPVKHILS+ELQLYFDK
Sbjct: 121 FCHWLAIEGVQPAIPENAPVEVILPPSDAKSNEQMGGLPVDIKLPVKHILSKELQLYFDK 180
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
ITEL VSRS S+LFK+ALVSLATDSGLHPLVPYFT F+ADEV+RGL +YSLLFALMRVVW
Sbjct: 181 ITELVVSRSSSILFKKALVSLATDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW 240
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICK 294
+LLQNPHI IEPYLHQ+MPSVVTCLVAKRLGNR +DNHWELRDFTAK+VA ICK
Sbjct: 241 SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRFSDNHWELRDFTAKVVALICK 294
>gi|297848008|ref|XP_002891885.1| TATA binding protein associated factor 6b [Arabidopsis lyrata
subsp. lyrata]
gi|297337727|gb|EFH68144.1| TATA binding protein associated factor 6b [Arabidopsis lyrata
subsp. lyrata]
Length = 503
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 285/547 (52%), Positives = 361/547 (65%), Gaps = 51/547 (9%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
+V KE++EVIAQSIG+S+ S + + ALAPDVEYR+ E+MQEAIKCMRH+RRTTL DVD
Sbjct: 1 MVTKESIEVIAQSIGLSSLSPEVSAALAPDVEYRVLEVMQEAIKCMRHARRTTLMAHDVD 60
Query: 63 EALKLRNVEPVYGFASG-----GPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLD 117
AL RN+E +RF+RA RDL++LDDKDVE K+VIEAPLP AP D
Sbjct: 61 SALHFRNLEVSSSSLLLPTSGSKSMRFKRAPENRDLYFLDDKDVELKNVIEAPLPNAPPD 120
Query: 118 TSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLY 177
SI HWLAI+G+QP IP+N+ +QAI S+ +E KD L + +LS++LQ+Y
Sbjct: 121 ASIFSHWLAIDGIQPSIPQNSHLQAI---SDLKRSEYKDD-----GLAARQVLSKDLQIY 172
Query: 178 FDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMR 237
FDK+TE A+++S S LF+QAL SL TD GLHPLVP+FT F+A+E+ R ++NY +L ALMR
Sbjct: 173 FDKVTEWALTQSGSTLFRQALSSLETDPGLHPLVPFFTSFIAEEIVRNMDNYPILLALMR 232
Query: 238 VVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYG 297
+ +LL NPH+ IEPYLHQ MPS++TCL+AK LG + +DNHW LR+FTA VA+ CKRYG
Sbjct: 233 LARSLLHNPHVHIEPYLHQFMPSIITCLIAKSLGRKSSDNHWHLRNFTASTVASTCKRYG 292
Query: 298 HVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEP 357
HVY+ L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPNLGPYL LL P
Sbjct: 293 HVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLP 352
Query: 358 EMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATL 416
EM EKQK+E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVWKTNG + +
Sbjct: 353 EMEPEKQKDEAKRHGAWLVYGALMVAAGRCLYERLKSSETLLSPPNSSVWKTNGKLTSPR 412
Query: 417 SNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSS 475
+KRK S D L QPPLKKIA G + S M+ T P
Sbjct: 413 QSKRKASSDNLTHQPPLKKIAVGGIIQMSSAQ-----MQMHGTTTVP------------- 454
Query: 476 VQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPA 535
+S RD A++ SA L + L LFE FGE +L F P
Sbjct: 455 --------QQSLVGRDI----ARRTSAAL------GTDVDNYLFPLFEYFGESMLMFTPK 496
Query: 536 PEMSLFL 542
E+S FL
Sbjct: 497 HELSFFL 503
>gi|17064762|gb|AAL32535.1| Very similar to TATA binding protein-associated factor [Arabidopsis
thaliana]
gi|28059031|gb|AAO29980.1| Very similar to TATA binding protein-associated factor [Arabidopsis
thaliana]
Length = 466
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/508 (52%), Positives = 341/508 (67%), Gaps = 48/508 (9%)
Query: 41 MQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKD 100
MQEAIKCMRH+RRTTL DVD AL RN+EP G S +RF+RA RDL++ DDKD
Sbjct: 1 MQEAIKCMRHARRTTLMAHDVDSALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKD 57
Query: 101 VEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPV 160
VE K+VIEAPLP AP D S+ HWLAI+G+QP IP+N+P+QAI S+ +E KD
Sbjct: 58 VELKNVIEAPLPNAPPDASVFSHWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD--- 111
Query: 161 EIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD 220
L + +LS++LQ+YFDK+TE A+++S S LF+QAL SL D GLHPLVP+FT F+A+
Sbjct: 112 --GLAARQVLSKDLQIYFDKVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAE 169
Query: 221 EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE 280
E+ + ++NY +L ALMR+ +LL NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+
Sbjct: 170 EIVKNMDNYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWD 229
Query: 281 LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVV 340
LR+FTA VA+ CKR+GHVY+ L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+V
Sbjct: 230 LRNFTASTVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMV 289
Query: 341 RLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSS 400
R L+LPNLGPYL LL PEM LEKQK E KRH AW VYGAL+ AAG+C+Y+RLK L S
Sbjct: 290 RFLVLPNLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLS 349
Query: 401 LPARSVWKTNG-IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDAT 458
P SVWKTNG + + +KRK S D L QPPLKKIA G + ST M+ T
Sbjct: 350 PPTSSVWKTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGT 404
Query: 459 AATPLD-NSDAD---HPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNS 514
P ++DAD H SPS+ I P + + + + D
Sbjct: 405 TTVPQQSHTDADARHHNSPST--IAPKTSAAAGTDVDN---------------------- 440
Query: 515 GKLLVSLFELFGEGILSFIPAPEMSLFL 542
L LFE FGE +L F P E+S FL
Sbjct: 441 --YLFPLFEYFGESMLMFTPTHELSFFL 466
>gi|4585980|gb|AAD25616.1|AC005287_18 TATA binding protein-associated factor-like protein [Arabidopsis
thaliana]
Length = 491
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 268/546 (49%), Positives = 350/546 (64%), Gaps = 61/546 (11%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
+V KE++EVIAQSIG+S S D + ALAPDVEYR+RE+MQEAIKCMRH+RRTTL DVD
Sbjct: 1 MVTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHDVD 60
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
AL RN+E + +++ + ++ L + L +
Sbjct: 61 SALHFRNLE----------------LLRTEIYTSSMTKMSSSRMLSKLLYQMHLLMHLFS 104
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
HWLAI+G+QP IP+N+P+QAI S+ +E KD L + +LS++LQ+YFDK+T
Sbjct: 105 HWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD-----GLAARQVLSKDLQIYFDKVT 156
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
E A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++NY +L ALMR+ +L
Sbjct: 157 EWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLARSL 216
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNT 302
L NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA VA+ CKR+GHVY+
Sbjct: 217 LHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHVYHN 276
Query: 303 LQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLE 362
L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPNLGPYL LL PEM LE
Sbjct: 277 LLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEMGLE 336
Query: 363 KQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSNKRK 421
KQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVWKTNG + + +KRK
Sbjct: 337 KQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVWKTNGKLTSPRQSKRK 396
Query: 422 TSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLD-NSDAD---HPSPSSV 476
S D L QPPLKKIA G + ST M+ T P ++DAD H SPS+
Sbjct: 397 ASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQSHTDADARHHNSPST- 450
Query: 477 QIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAP 536
I P + + + + D L LFE FGE +L F P
Sbjct: 451 -IAPKTSAAAGTDVDN------------------------YLFPLFEYFGESMLMFTPTH 485
Query: 537 EMSLFL 542
E+S FL
Sbjct: 486 ELSFFL 491
>gi|42495558|gb|AAS17940.1| TATA binding protein associated factor 6b isoform 3 [Arabidopsis
thaliana]
Length = 476
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 272/546 (49%), Positives = 348/546 (63%), Gaps = 76/546 (13%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
+V KE++EVIAQSIG+S S D + ALAPDV D
Sbjct: 1 MVTKESIEVIAQSIGLSTLSPDVSAALAPDV----------------------------D 32
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
AL RN+EP G S +RF+RA RDL++ DDKDVE K+VIEAPLP AP D S+
Sbjct: 33 SALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFS 89
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
HWLAI+G+QP IP+N+P+QAI S+ +E KD L + +LS++LQ+YFDK+T
Sbjct: 90 HWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD-----GLAARQVLSKDLQIYFDKVT 141
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
E A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++NY +L ALMR+ +L
Sbjct: 142 EWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLARSL 201
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNT 302
L NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA VA+ CKR+GHVY+
Sbjct: 202 LHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHVYHN 261
Query: 303 LQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLE 362
L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPNLGPYL LL PEM LE
Sbjct: 262 LLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEMGLE 321
Query: 363 KQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSNKRK 421
KQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVWKTNG + + +KRK
Sbjct: 322 KQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVWKTNGKLTSPRQSKRK 381
Query: 422 TSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL-DNSDAD---HPSPSSV 476
S D L QPPLKKIA G + ST M+ T P ++DAD H SPS+
Sbjct: 382 ASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQSHTDADARHHNSPST- 435
Query: 477 QIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAP 536
I P + + + + D L LFE FGE +L F P
Sbjct: 436 -IAPKTSAAAGTDVDN------------------------YLFPLFEYFGESMLMFTPTH 470
Query: 537 EMSLFL 542
E+S FL
Sbjct: 471 ELSFFL 476
>gi|334183302|ref|NP_001185221.1| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194967|gb|AEE33088.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 476
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 272/546 (49%), Positives = 348/546 (63%), Gaps = 76/546 (13%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
+V KE++EVIAQSIG+S S D + ALAPDVE
Sbjct: 1 MVTKESIEVIAQSIGLSTLSPDVSAALAPDVE---------------------------- 32
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
AL RN+EP G S +RF+RA RDL++ DDKDVE K+VIEAPLP AP D S+
Sbjct: 33 SALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFL 89
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
HWLAI+G+QP IP+N+P+QAI S+ +E KD L + +LS++LQ+YFDK+T
Sbjct: 90 HWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD-----GLAARQVLSKDLQIYFDKVT 141
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
E A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++NY +L ALMR+ +L
Sbjct: 142 EWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLARSL 201
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNT 302
L NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA VA+ CKR+GHVY+
Sbjct: 202 LHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHVYHN 261
Query: 303 LQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLE 362
L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPNLGPYL LL PEM LE
Sbjct: 262 LLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEMGLE 321
Query: 363 KQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSNKRK 421
KQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVWKTNG + + +KRK
Sbjct: 322 KQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVWKTNGKLTSPRQSKRK 381
Query: 422 TSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL-DNSDAD---HPSPSSV 476
S D L QPPLKKIA G + ST M+ T P ++DAD H SPS+
Sbjct: 382 ASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQSHTDADARHHNSPST- 435
Query: 477 QIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAP 536
I P + + + + D L LFE FGE +L F P
Sbjct: 436 -IAPKTSAAAGTDVDN------------------------YLFPLFEYFGESMLMFTPTH 470
Query: 537 EMSLFL 542
E+S FL
Sbjct: 471 ELSFFL 476
>gi|334183300|ref|NP_001031188.2| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194966|gb|AEE33087.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 428
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/467 (52%), Positives = 313/467 (67%), Gaps = 45/467 (9%)
Query: 82 LRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQ 141
+RF+RA RDL++ DDKDVE K+VIEAPLP AP D S+ HWLAI+G+QP IP+N+P+Q
Sbjct: 1 MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSPLQ 60
Query: 142 AIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSL 201
AI S+ +E KD L + +LS++LQ+YFDK+TE A+++S S LF+QAL SL
Sbjct: 61 AI---SDLKRSEYKDD-----GLAARQVLSKDLQIYFDKVTEWALTQSGSTLFRQALASL 112
Query: 202 ATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 261
D GLHPLVP+FT F+A+E+ + ++NY +L ALMR+ +LL NPH+ IEPYLHQLMPS+
Sbjct: 113 EIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLARSLLHNPHVHIEPYLHQLMPSI 172
Query: 262 VTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 321
+TCL+AKRLG R +DNHW+LR+FTA VA+ CKR+GHVY+ L R+T++LL+ LDP +A
Sbjct: 173 ITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKA 232
Query: 322 LTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 381
L QHYGA+QG+ ALG N+VR L+LPNLGPYL LL PEM LEKQK E KRH AW VYGAL+
Sbjct: 233 LPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALM 292
Query: 382 QAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSNKRKTSMD-LEEQPPLKKIATDG 439
AAG+C+Y+RLK L S P SVWKTNG + + +KRK S D L QPPLKKIA G
Sbjct: 293 VAAGRCLYERLKTSETLLSPPTSSVWKTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGG 352
Query: 440 PVDAVSTSSMPTPMEEDATAATPL-DNSDAD---HPSPSSVQIPPDSGSESRSKRDKGDS 495
+ ST M+ T P ++DAD H SPS+ I P + + + + D
Sbjct: 353 IIQMSSTQ-----MQMRGTTTVPQQSHTDADARHHNSPST--IAPKTSAAAGTDVDN--- 402
Query: 496 QAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 542
L LFE FGE +L F P E+S FL
Sbjct: 403 ---------------------YLFPLFEYFGESMLMFTPTHELSFFL 428
>gi|217074866|gb|ACJ85793.1| unknown [Medicago truncatula]
gi|388501788|gb|AFK38960.1| unknown [Medicago truncatula]
Length = 326
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/326 (59%), Positives = 236/326 (72%), Gaps = 19/326 (5%)
Query: 236 MRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKR 295
MRVV +LLQNPHI IEPYLHQLMPS+VTCLVAKRLG+RL DNHWELRDFTA LVA+I KR
Sbjct: 1 MRVVNSLLQNPHIHIEPYLHQLMPSIVTCLVAKRLGSRLTDNHWELRDFTANLVASIYKR 60
Query: 296 YGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLL 355
+GHVY+ LQ+RL+KTLLNA DPK+A+TQHYGA+QGL ALGPNVVRLLLLPNL Y+ LL
Sbjct: 61 FGHVYSNLQSRLSKTLLNAFSDPKKAMTQHYGAIQGLGALGPNVVRLLLLPNLEAYIRLL 120
Query: 356 EPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVAT 415
EPEMLLE QKNE+KRHEAWRVYGALL+AAGQC+Y LK+FP S +VWKT+ V T
Sbjct: 121 EPEMLLETQKNEMKRHEAWRVYGALLRAAGQCVYVSLKLFPAFPSPLPHTVWKTSASVLT 180
Query: 416 L-SNKRKTS-MDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDAT---AATPLDNSDADH 470
NKRK S M+LE+QPPLKK+ TDG V V +S + EE+ ++ L A
Sbjct: 181 SPPNKRKASPMELEQQPPLKKVDTDGEVSVVQENSSASHKEEETVTQASSAELKIGAASS 240
Query: 471 PSPSSVQIPPD-----SGSESRSKR---------DKGDSQAQKLSAILPQVWKDDLNSGK 516
+ +I D SG +++ + GD+Q K+S++L +WKD+LNSG+
Sbjct: 241 SGETKNKITTDGVVRSSGGDTQDNKITTDGVVRSSGGDTQDLKISSVLAHIWKDELNSGR 300
Query: 517 LLVSLFELFGEGILSFIPAPEMSLFL 542
+L SL ELFGE ILSFI EM +FL
Sbjct: 301 VLTSLVELFGENILSFIQNREMCMFL 326
>gi|290999389|ref|XP_002682262.1| predicted protein [Naegleria gruberi]
gi|284095889|gb|EFC49518.1| predicted protein [Naegleria gruberi]
Length = 399
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/402 (46%), Positives = 263/402 (65%), Gaps = 20/402 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
+S KET++VIAQS+GI+ + A ALA DVEYR+REI+Q+A KCM+H++R LTTDD
Sbjct: 1 LSFFQKETIQVIAQSVGITKLKDEIAQALALDVEYRVREIIQDASKCMKHAKRGVLTTDD 60
Query: 61 VDEALKLRNVEPVYGFA--SGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ AL ++N+EP+YGF S P RFRR +DL++L+D +++ KD +E PLP+ P+
Sbjct: 61 ISNALAMKNIEPLYGFKGQSSQPNRFRRVKQTKDLYFLEDVELDLKDCLEKPLPKIPIGP 120
Query: 119 SIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPV--------EIKLPVKHIL 170
SI HWLAI+G+QP IP+N ++ + + ++ V E K VKHIL
Sbjct: 121 SIFTHWLAIQGIQPKIPQNPTIEETESERKKESKDKDQSKKVSSSHDPNVEFKPLVKHIL 180
Query: 171 SRELQLYFDKITELA--VSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN 228
S ELQ+YF+K+TE + L K + SLATDSG++ LVPYFT F+A EV+ + N
Sbjct: 181 SEELQMYFEKVTEAIKDTTNQKKELRKAVIESLATDSGINQLVPYFTQFIASEVTNNMRN 240
Query: 229 YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKL 288
+LL+ LM + LL NP+I IE YLHQ+MPS++TC+V K L +NHW LRDF+A
Sbjct: 241 LTLLYRLMEMTKALLVNPNIHIELYLHQIMPSILTCIVGKTLCENPYENHWGLRDFSANT 300
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL--- 345
+A IC+++G Y+TLQ R+TKTLL+A LDPKR+ HYGA+ G+ ALG +V +LLLL
Sbjct: 301 IAYICRKFGSSYHTLQPRITKTLLHAFLDPKRSRATHYGAIVGITALGSHVTQLLLLEPP 360
Query: 346 --PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAG 385
NL + +LL PE++ +H+A+ Y ALL A G
Sbjct: 361 KNSNLKIFCNLLLPELVSSDMNT---KHQAFMCYKALLTAPG 399
>gi|255079732|ref|XP_002503446.1| predicted protein [Micromonas sp. RCC299]
gi|226518713|gb|ACO64704.1| predicted protein [Micromonas sp. RCC299]
Length = 401
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/401 (47%), Positives = 266/401 (66%), Gaps = 12/401 (2%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
VP +++VIAQ +GI + + + A ALAPDVEYR+RE++Q+A K MRHS+RT L+TDD++
Sbjct: 1 VPDASIKVIAQHVGIESLADEVARALAPDVEYRLREVIQDACKFMRHSKRTELSTDDINS 60
Query: 64 ALKLRNVEPVYGFASG-GPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
+L +R EP+YGF +G GP+ F G+ +L+ ++K ++ KD++ A LPR P+ ++V
Sbjct: 61 SLVMRRCEPLYGFPAGAGPIPFHEVPGHPELYIPENKILDLKDILAAKLPRPPIAVNVVP 120
Query: 123 HWLAIEGVQPVIPEN-AP---VQAIAAPSNGTNNEQK--DGLPVEIKLPVKHILSRELQL 176
HWLA+EGVQP+IPEN AP + P G K +G ++ V H LS+ELQL
Sbjct: 121 HWLAVEGVQPLIPENPAPRPELDRTPGPPPGATGAVKPEEGTGAVVQPVVAHELSKELQL 180
Query: 177 YFDKITELAVSRSDSV-----LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 231
YFD+IT + + + AL SLATDSGLH L+PYFT FV DEV+ L N
Sbjct: 181 YFDRITAVVRGGGGERGAEAPVLRAALESLATDSGLHQLLPYFTQFVQDEVATSLRNMPR 240
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAA 291
L AL+ + L NP I +E YLHQLMP+++TC+VAKRL D+HW LR ++A++++
Sbjct: 241 LKALVGTIEALCSNPEIHVELYLHQLMPTLITCMVAKRLSADPTDDHWTLRRYSAEVMSG 300
Query: 292 ICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPY 351
IC R+G Y T+Q R+T+TLL A+LDP++ + H+GA+ GLAALGP V RLL++PNL Y
Sbjct: 301 ICARFGKDYPTIQPRITRTLLRAMLDPRKPFSTHFGAIAGLAALGPRVTRLLIVPNLKAY 360
Query: 352 LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRL 392
L +LEP + E K V EA RV+ AL +A G C++ L
Sbjct: 361 LEVLEPHLTREHAKRRVTSSEARRVHDALKEAIGACLHAAL 401
>gi|413956297|gb|AFW88946.1| putative TATA binding protein family protein [Zea mays]
Length = 334
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 221 EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE 280
+V+R L + +L ALMRVV +LL+NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNHWE
Sbjct: 12 QVTRSLGDLPVLLALMRVVQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWE 71
Query: 281 LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVV 340
LRDF+A LVA +C+R+GHVY+ LQ RLTKTL++A LDP ++LTQHYGAVQG++ALGP+ +
Sbjct: 72 LRDFSANLVALVCQRFGHVYHNLQNRLTKTLIHAFLDPAKSLTQHYGAVQGISALGPSAI 131
Query: 341 RLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSS 400
RLLLLPNL Y+ LLEPE+ LEKQKNE+KR EAWRVYGALL AAG+C+YDRLK+FP L S
Sbjct: 132 RLLLLPNLVTYMQLLEPELQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPGLLS 191
Query: 401 LPARSVWKTNGIVATLS-NKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEEDAT 458
R + ++N V T + NKRK+S DL QPPLKK+ATD ++++++SM M + A
Sbjct: 192 PSMRPLLQSNKRVLTNNPNKRKSSTDLSATQPPLKKMATDATANSMASASMGGNM-QGAM 250
Query: 459 AATPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLL 518
P + SS +S + +RD+G AQ++SA+L Q WK+D ++G LL
Sbjct: 251 DGFPNQLGNPGMMQASSSGQTVESIPSAAVRRDQGSDLAQRVSAVLRQAWKEDQDTGHLL 310
Query: 519 VSLFELFGEGILSFIPAPEMSLFL 542
SL+E+FGE I SF+ PE+SLF+
Sbjct: 311 GSLYEVFGEAIFSFVQPPEISLFV 334
>gi|440797528|gb|ELR18614.1| Hypothetical protein ACA1_155710 [Acanthamoeba castellanii str.
Neff]
Length = 462
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 169/340 (49%), Positives = 239/340 (70%), Gaps = 5/340 (1%)
Query: 48 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 107
MRHS+R ++T+DV+ AL+LRNVE +YGF+ PL+F +A+G +DLF++DD++++F ++I
Sbjct: 1 MRHSKREKMSTEDVNNALRLRNVETLYGFSGNEPLKFVKAVGTKDLFFIDDREIDFTEII 60
Query: 108 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQ-AIAAPSNGTNNEQKDGLPVEIKLPV 166
+PLP P ++S+ HWLA+EGVQP IP+N +Q + ++++ V
Sbjct: 61 ASPLPEVPRESSLSAHWLAVEGVQPAIPQNPTLQIETGDAALKRKRAAAAESDLQVRPIV 120
Query: 167 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 226
KH LS+ELQLY++KIT+ AV + + AL SLATD G+ L+PYFT F++DEV+ L
Sbjct: 121 KHTLSKELQLYYEKITK-AVKGTSEKVATAALNSLATDPGIQQLLPYFTQFISDEVTHNL 179
Query: 227 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 286
+N + L LMR+V LLQ+ ++ IEPYLHQLMP ++TCLV +RL ++HWELRD+ A
Sbjct: 180 HNLAYLKNLMRMVRALLQSNNLHIEPYLHQLMPPILTCLVGRRLCENPNEDHWELRDYAA 239
Query: 287 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 346
LVA IC R+G Y LQ R+TKTL+NA LD R LT HYGA+ GL++LG V +LL+LP
Sbjct: 240 SLVALICLRFGKAYTNLQPRITKTLINAFLDLSRPLTTHYGAIVGLSSLGHYVTQLLILP 299
Query: 347 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQ 386
NL YL+LLEPE+ N ++R EA + YGALL+AAG+
Sbjct: 300 NLKSYLTLLEPEL---NGTNAIRRLEAKKCYGALLKAAGR 336
>gi|330846367|ref|XP_003295007.1| TATA-binding protein-associated-factor [Dictyostelium purpureum]
gi|325074402|gb|EGC28467.1| TATA-binding protein-associated-factor [Dictyostelium purpureum]
Length = 518
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 185/444 (41%), Positives = 275/444 (61%), Gaps = 59/444 (13%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS++P +T+++IA+S GISN + A LA DVEYRIREI QEAIK M+HS+R L+ DD
Sbjct: 1 MSVLPNDTIKIIAESAGISNLPDEIASQLASDVEYRIREIAQEAIKFMKHSKRDHLSCDD 60
Query: 61 VDEALKLRNVEPVYGFAS----GGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAP 115
++ AL L+NVE +YG+ S L+F++ + ++YL+DK++ F++V+ PLP+ P
Sbjct: 61 INNALGLKNVEVLYGYNSCVSDNSLLKFQKTTTSTQAIYYLNDKELTFQEVMNQPLPKVP 120
Query: 116 LDTSIVCHWLAIEGVQPVIPEN-APVQ------------------AIAAPS----NGTN- 151
+ ++ HWLA+EGVQP+IP+N +P + +AA S NGTN
Sbjct: 121 REPTLSAHWLALEGVQPLIPQNPSPYEIEEHFKNLNKKFKSEKANQLAASSSNTANGTNV 180
Query: 152 -----------------NEQKDGLPVEIKLP----------VKHILSRELQLYFDKITEL 184
+Q+ +P LP VKHILS+E+Q++++KIT
Sbjct: 181 PPSTNNILSKPNIATQQQKQEPSIPGIHTLPSVTTTVVKPTVKHILSKEIQMFYEKITN- 239
Query: 185 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQ 244
++ + LF A+ SL DS LH L+PYF F++ +V++ L N +LL LM++ +L+
Sbjct: 240 SIKGDNQKLFNAAIHSLKNDSSLHQLLPYFINFISVQVTQNLTNLNLLMKLMKMSQAILE 299
Query: 245 NPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQ 304
+ H++ E YLHQLMP ++TCLV K+L DNHWELRDF+A+LV IC+++G Y++LQ
Sbjct: 300 SKHLKPELYLHQLMPPILTCLVGKKLCTSPMDNHWELRDFSAQLVTFICRKFGDSYSSLQ 359
Query: 305 TRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQ 364
+R+TKTL+ L D + LT HYGAV GL+ LG NV++ LLLP + Y LLEPE L
Sbjct: 360 SRITKTLVQTLHDTTKPLTTHYGAVVGLSGLGKNVIQFLLLPYISTYYKLLEPE--LNNN 417
Query: 365 KNEVKRHEAWRVYGALLQAAGQCI 388
N +K EA +V A+++A G+ +
Sbjct: 418 SNPLKSMEANKVLNAIIEATGKFL 441
>gi|302851795|ref|XP_002957420.1| hypothetical protein VOLCADRAFT_68197 [Volvox carteri f.
nagariensis]
gi|300257224|gb|EFJ41475.1| hypothetical protein VOLCADRAFT_68197 [Volvox carteri f.
nagariensis]
Length = 463
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 176/401 (43%), Positives = 261/401 (65%), Gaps = 11/401 (2%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS + V+ IA S+ +++ + +AA ALAPDVEYR+RE++Q+A+K RH +RT LT D
Sbjct: 1 MSFITPAAVKAIALSVDVTHLTEEAAKALAPDVEYRLREVIQDALKFARHCKRTKLTIQD 60
Query: 61 VDEALKLRNVEPVYGF-ASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 119
++ A++LRN+EP+YGF + P +F RA G+ D++++ D V + + APLP+AP T+
Sbjct: 61 INNAMRLRNLEPMYGFLGNNDPAKFVRATGHSDVYFVHDAMVPLEQITYAPLPKAPNHTT 120
Query: 120 IVCHWLAIEGVQPVIPENAPVQAIAAPSNGTN------NEQKDGLPVEIKLPVKHILSRE 173
++ HWL IEGVQP ENA V+ P+ + ++LPV+HILS E
Sbjct: 121 VMPHWLFIEGVQPHTEENAAVERPPPPAKRPRLAAAGGPGTAGSVSERVQLPVQHILSDE 180
Query: 174 LQLYFDKITELAVSRSDSVLFKQAL-VSLATD-SGLHPLVPYFTYFVADEVSRGLNNYSL 231
+Q +++ + + + +F++++ S + D + + L+PY T FV DEV+ GL +
Sbjct: 181 MQRLLEQVRAVCRGNAIAFVFRRSIPGSCSGDRACMQQLLPYLTKFVCDEVAGGLRHLPR 240
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAA 291
L ++RV+ LL NP +Q+EPYLH LMP ++TC +AK LG +HW LRD LVAA
Sbjct: 241 LQMVLRVMQALLLNPSVQLEPYLHNLMPPLLTCCLAKALGPGPRCDHWRLRDSAGSLVAA 300
Query: 292 ICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPY 351
+C R+G + +L+ +++K LL ALLD + L HYGAV GLAALGP VRLLLLP+L PY
Sbjct: 301 VCGRFGEPFYSLKVKVSKQLLRALLDGSKPLPSHYGAVMGLAALGPATVRLLLLPHLEPY 360
Query: 352 LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRL 392
L+ L+P LE ++ ++++EA RVYGALL AAG +YDRL
Sbjct: 361 LAKLQPA--LEARQEGMRQYEATRVYGALLTAAGTAMYDRL 399
>gi|213409241|ref|XP_002175391.1| transcription initiation factor TFIID subunit 6
[Schizosaccharomyces japonicus yFS275]
gi|212003438|gb|EEB09098.1| transcription initiation factor TFIID subunit 6
[Schizosaccharomyces japonicus yFS275]
Length = 458
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 180/405 (44%), Positives = 254/405 (62%), Gaps = 26/405 (6%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
++I ++++ +A+ +GI N D A A+A D+EYRI +I+QEAIK MRHS+R LT D
Sbjct: 3 LTIWNTDSIKDLAEMLGIGNLGDDVAKAIAMDLEYRIHQIIQEAIKFMRHSKRRVLTNSD 62
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLD 117
+ AL+ NVEP+YGF S P+ F A G L+YLDD++++F+ VI APLP+ P D
Sbjct: 63 ISAALRTLNVEPLYGFNSNEPVVFNEAPLGPGQSSLYYLDDEEIDFEKVINAPLPKIPRD 122
Query: 118 TSIVCHWLAIEGVQPVIPEN--------------APVQAIAAPSNGTNNEQKDGLP---- 159
+ HWLAIEGVQP IP+N A A S G D P
Sbjct: 123 ITYTAHWLAIEGVQPTIPQNPTTADHSGAGGDWSAKAGAAGVKSAG-GKSTSDVFPSADN 181
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
VE+K V+H+LS+ELQLYF++I +S S++ L AL SL TD GLH L+PYF F++
Sbjct: 182 VEVKPLVRHVLSKELQLYFERIANALLSDSNAELRNAALSSLRTDPGLHQLLPYFIIFLS 241
Query: 220 DEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLADNH 278
D V++ L+N+++L LM++ W+LL NP++ +EPY+HQL+P ++TC+VAK LG L H
Sbjct: 242 DSVTQNLSNHNVLKTLMQMAWSLLDNPNLFVEPYIHQLIPPILTCMVAKYLGPGGLDTEH 301
Query: 279 WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPN 338
+ELRDF A L+ IC R+G VY TL+ R+T+TLL A LD + T HYGA+ GL +G
Sbjct: 302 YELRDFAAYLLGIICDRFGDVYYTLKPRVTRTLLKAFLDNTKPFTTHYGAIIGLKTMGKE 361
Query: 339 VVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
+R+L++PN+ Y L+ LEK + ++ EA R AL A
Sbjct: 362 AIRVLIVPNIKVYELLVIKA--LEKGTPQ-EKQEANRCINALNDA 403
>gi|145353498|ref|XP_001421048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581284|gb|ABO99341.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 383
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 173/383 (45%), Positives = 245/383 (63%), Gaps = 33/383 (8%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S V ++V IA +IG DAA ALA D EYR+R++ Q+A+KCMR S+RTTL+ +DV
Sbjct: 5 SRVHVDSVRAIAATIGAPPVDADAARALASDCEYRLRQVFQDAMKCMRASKRTTLSAEDV 64
Query: 62 DEALKLRNVEPVYGFASG-GPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
+ AL+LRN EP+YGF +G +++ D+FY++D++++ ++++ LPR P++ ++
Sbjct: 65 NAALRLRNCEPLYGFGAGTSDYEYKQTREDPDVFYVEDREIDMRELLTRKLPRPPIEVNL 124
Query: 121 VCHWLAIEGVQPVIPENAPV-------------------QAIAAPSNGTNNEQKDGLPVE 161
V HWLA+EGVQP+IPEN V +A+ A NG + + LPV
Sbjct: 125 VPHWLAVEGVQPMIPENPMVPAAEPVAIEPPRGMKRPRPRAMGAKENGGDPDAGGLLPV- 183
Query: 162 IKLPVKHILSRELQLYFDKITEL--AVSRSDSV-----LFKQALVSLATDSGLHPLVPYF 214
V H LSRELQ YFDK+T L R+D+ L AL SL+ D GLH L+PYF
Sbjct: 184 ----VSHTLSRELQFYFDKVTALIRQAGRADASDREVELLSTALRSLSADVGLHNLMPYF 239
Query: 215 TYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL 274
T F+ +E ++ L + L L++++ L+ NP I +E YLHQLMPSVVTC+VAKRL L
Sbjct: 240 TQFITEETTQNLRDLPRLRVLIQMIRALISNPDINVELYLHQLMPSVVTCVVAKRLCQNL 299
Query: 275 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
++HW LRD A +A IC ++G Y +++ R+T+TLL ALLD K +T HYGA++GL A
Sbjct: 300 DEDHWSLRDDAAYTMAFICGKFGDAYPSIRPRITRTLLRALLDTK-PMTTHYGAIRGLHA 358
Query: 335 LGPNVVRLLLLPNLGPYLSLLEP 357
LGP VVR ++PNL YL+ LEP
Sbjct: 359 LGPKVVRETVMPNLRSYLNTLEP 381
>gi|428178631|gb|EKX47505.1| transcription initiation factor TFIID, subunit TAF6 [Guillardia
theta CCMP2712]
Length = 390
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 168/390 (43%), Positives = 242/390 (62%), Gaps = 7/390 (1%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MSI+ ++ V+ A + G+ N A +LA D EYR+REI+Q+A+ RHSRR LT D
Sbjct: 1 MSIIREDLVQEAAAAAGVKNVGEKVAASLAADAEYRLREIIQDALNFKRHSRRRKLTPAD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRF--RRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
++ AL++RNVEP+YGF P+ + ++ G +++K++EF +++ APLP+AP++
Sbjct: 61 INNALRVRNVEPLYGFTFPEPIVYTTKQGEGGGSQIIIEEKELEFDELLSAPLPKAPVEV 120
Query: 119 SIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYF 178
++ HWLAI+GVQP+IPEN + + + G + KD E V+ +LS+ELQLY+
Sbjct: 121 TLRAHWLAIDGVQPLIPENPIPENLDVAAAGKKRKVKDSETSEKDPMVQDVLSQELQLYY 180
Query: 179 DKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRV 238
+ +T + S +L AL SL D GL L+PYF F+ DEV R L + +L AL+ +
Sbjct: 181 ENVTSAVIQGSPHIL-SAALSSLRKDPGLQALLPYFAQFITDEVKRSLKDLPILNALLSM 239
Query: 239 VWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGH 298
+L N + +EP LH+LMP+V+TC+V K+L D HW LRD AKL+ I RY
Sbjct: 240 TLAILSNAQLHVEPRLHELMPAVMTCMVGKQLCKSSLDPHWNLRDRAAKLLNFIVDRYAA 299
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
Y+TLQ R+T TLL+A L+P + LT HYGA+ GLAALGP + L++PN Y SLL+
Sbjct: 300 PYSTLQQRITNTLLHAFLEPTKPLTTHYGAIAGLAALGPQTMNQLIVPNAPAYASLLQKY 359
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQAAGQCI 388
N +KR EA RV GALL A G+
Sbjct: 360 TF----DNHIKRFEAIRVRGALLDAVGKSF 385
>gi|19075428|ref|NP_587928.1| histone H4-like TAF Taf6, SAGA complex subunit [Schizosaccharomyces
pombe 972h-]
gi|74626857|sp|O74462.1|TAF6_SCHPO RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=TBP-associated factor 50 kDa;
Short=TAFII-50; Short=TAFII50; AltName:
Full=TBP-associated factor 6
gi|3560272|emb|CAA20756.1| histone H4-like TAF Taf6, SAGA complex subunit [Schizosaccharomyces
pombe]
Length = 452
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/388 (43%), Positives = 248/388 (63%), Gaps = 24/388 (6%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++ +A+ +GI N + + A A+A D+EYRI +++QEA K M HS+RT LT+ D+ AL+
Sbjct: 9 ESIKDVAEMLGIGNLADEPAAAIAMDLEYRIHQVVQEATKFMVHSKRTVLTSADISSALR 68
Query: 67 LRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCH 123
NVEP+YGF + PL F A G L+YLDD++V+F+ +I APLP+ P + S H
Sbjct: 69 TLNVEPLYGFNNSRPLEFHEAAVGAGQNSLYYLDDEEVDFEKIINAPLPKVPRNISYSAH 128
Query: 124 WLAIEGVQPVIPEN-APVQAIAA--PSNGTNN----------EQKDGLP----VEIKLPV 166
WLAIEGVQP IP+N P S GT+ E ++G+ VEIK V
Sbjct: 129 WLAIEGVQPAIPQNPTPSDHTVGEWASKGTSGVMPGASTAAKEARNGVTSMDNVEIKPLV 188
Query: 167 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 226
+H+LS+ELQLYF++IT + ++ L AL SL D GLH L+PYF F++D V+R L
Sbjct: 189 RHVLSKELQLYFERITSALLDETNVELRDAALSSLRDDPGLHQLLPYFIMFLSDSVTRNL 248
Query: 227 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN-HWELRDFT 285
N +L LM + W LL NP++ +EPY+ QLMPS++TCLVAKRLG+ ++ H+ LRD
Sbjct: 249 GNLVVLTTLMHMAWALLDNPNLFVEPYVQQLMPSILTCLVAKRLGSDPNNHEHYALRDLA 308
Query: 286 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 345
A L+ +C R+G+VY TL+ R+T+T L A LD + + HYGA++GL +G +R+L++
Sbjct: 309 AFLLGIVCDRFGNVYYTLKPRVTRTALKAFLDNTKPYSTHYGAIKGLKTMGKEAIRVLVV 368
Query: 346 PNLGPYLSLLEPEMLLEKQKNEVKRHEA 373
PN+ Y L+ + ++ NE + +EA
Sbjct: 369 PNIKVYEVLVRKTL---EKGNEEEIYEA 393
>gi|303272643|ref|XP_003055683.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463657|gb|EEH60935.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 548
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/410 (41%), Positives = 254/410 (61%), Gaps = 31/410 (7%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P +V IA+++G N + A ALAPDVEYR+RE++Q+A K MRHS+R L+T+DV+
Sbjct: 13 LPGASVSAIAETVGFDNLPDEVARALAPDVEYRLREVIQDACKFMRHSKRVQLSTEDVNS 72
Query: 64 ALKLRNVEPVYGFASGGP-LRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
+LK++ VE +YGF + P + F+ G+ D F K++E KD++ LPR P+ ++V
Sbjct: 73 SLKMKKVEALYGFPANAPAIAFKEVPGHPDFFTQASKEIELKDILAMKLPRPPIAVNVVP 132
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE--IKLPVKHILSRELQLYFDK 180
HWLA++GVQP+IPEN P+ P + + + V+ + + LS+ELQLYFD+
Sbjct: 133 HWLAVDGVQPLIPENPPL----GPGENLRPDLEADIDVDERARAMFRAPLSKELQLYFDR 188
Query: 181 ITELAVSRS-----DSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFAL 235
+T AV R ++ + + AL SLATD+GLH L+PY FV EV++ L L AL
Sbjct: 189 VT--AVIRGGGAGEEAPMLRAALASLATDAGLHQLMPYLVQFVQTEVAKSLRRLPKLRAL 246
Query: 236 MRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKR 295
++ NP++ +E YLHQ MPS+VTC+VAKRL +NHW LR+ A+ + +C++
Sbjct: 247 TAATLAIVANPNVHVELYLHQFMPSIVTCMVAKRLCASPDENHWALREQAAETMNFVCEK 306
Query: 296 YGHVYNTLQTR----LTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPY 351
+G Y T+Q R +T+TL ALLD + L+ HYGA+ GL ALGP VVR+LL+PN+ Y
Sbjct: 307 FGREYPTIQARSIHWITRTLSKALLDETKPLSTHYGAIVGLHALGPRVVRMLLVPNIRRY 366
Query: 352 LSLLEPEM---------LLEKQKNE----VKRHEAWRVYGALLQAAGQCI 388
+S LEP + E++K +K +EA +V AL +A G C+
Sbjct: 367 MSRLEPFLEPPTGSGGGADEEKKTHASKTLKYNEAVKVKDALRRAVGLCL 416
>gi|308810433|ref|XP_003082525.1| putative TAF6 (ISS) [Ostreococcus tauri]
gi|116060994|emb|CAL56382.1| putative TAF6 (ISS), partial [Ostreococcus tauri]
Length = 563
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 187/445 (42%), Positives = 253/445 (56%), Gaps = 76/445 (17%)
Query: 8 TVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTD-------- 59
+V +A +IG S +AA ALA DVEYR+R I+Q+AIK MRH +R TL +
Sbjct: 28 SVVAVADTIGAPRPSDEAAKALASDVEYRLRTIIQDAIKIMRHCKRETLRAEVRERWRDA 87
Query: 60 -------DVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLP 112
+ ALKLRN EP+YGF +G +FYLD+++++ +++I LP
Sbjct: 88 VRAVNDGRCNAALKLRNCEPLYGFGTG----------TSSVFYLDEREIDVRELITKRLP 137
Query: 113 RAPLDTSIVCHWLAIEGVQPVIPEN--------APVQ------AIAAPSNGTNNEQKDGL 158
R P+D ++V HWLA+EGVQP+IPEN P+Q A + G + GL
Sbjct: 138 RPPVDVNLVPHWLAVEGVQPMIPENPMPLAPEPKPLQPPLGSKRPRARAEGGGDPDAGGL 197
Query: 159 -PVEIKLPVKHILSRELQLYFDKITELA-------VSRSDSVLFKQALVSLATDSGLHPL 210
PV V H+L++ELQ YFDK+T L S D L +AL SL D GLH L
Sbjct: 198 QPV-----VSHVLTKELQYYFDKVTALVRGAGRAEASDRDVDLLARALRSLGEDVGLHNL 252
Query: 211 VPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 270
+PYFT F+ +E + L + L L++++ L+ NP I +E YLHQLMPSVVTC+VAKRL
Sbjct: 253 MPYFTQFITEETTASLRDLPRLRVLIQMIRALISNPDINVELYLHQLMPSVVTCVVAKRL 312
Query: 271 GNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQ 330
L ++HW LRD A VA +C ++G Y ++Q R+T+TLL ALLD K LT HYGAV+
Sbjct: 313 CQNLDEDHWSLRDDAANTVAFVCAKFGAAYPSIQPRITRTLLRALLDTK-PLTTHYGAVR 371
Query: 331 GLAALGPNVVRLLLLPNLGPYLS-LLEP---------------------EMLLEKQKNEV 368
GL ALGP VVR ++PNL Y++ LEP + + K K V
Sbjct: 372 GLQALGPKVVRETIMPNLRAYMTNTLEPALEAPKPLDDSELKNASEEDRNIAVAKAKLAV 431
Query: 369 KRH-EAWRVYGALLQAAGQCIYDRL 392
RH +A RV GAL +A G C+ D +
Sbjct: 432 LRHTDAQRVMGALQEAVGACLRDEI 456
>gi|406608131|emb|CCH40565.1| Transcription initiation factor TFIID subunit 6 [Wickerhamomyces
ciferrii]
Length = 481
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/376 (42%), Positives = 242/376 (64%), Gaps = 32/376 (8%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ +A S+G+++ + +A LA DVEYRI EI+++++K MRHS+R TLTT+DV+++
Sbjct: 23 PIDTVKDVADSLGLTDLNDEALRNLAMDVEYRIHEILEQSVKFMRHSKRKTLTTNDVEKS 82
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI--GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
LK+ NVEP+YG+ PL F+ A+ + L+Y+DD++V+F+ +I PLP+ P ++
Sbjct: 83 LKVLNVEPLYGYDVSRPLNFKEALVGNGQTLYYVDDEEVDFEKLINQPLPKVPRSSTFTA 142
Query: 123 HWLAIEGVQPVIPEN---------APVQ--AIAAPSNGTN------------NEQKDGLP 159
HWL+IEGVQP IP+N PV AI NG + N G+
Sbjct: 143 HWLSIEGVQPAIPQNPLESEIRSQLPVSRGAITNVLNGNDAVTSNNTTGSNTNAGSTGVS 202
Query: 160 ---VEIKLPVKHILSRELQLYFDKITELAVSRSDSV----LFKQALVSLATDSGLHPLVP 212
EIK VKH+LS+ELQLYFDK+ + ++ D+ L + AL SL +D GLH LVP
Sbjct: 203 AKDTEIKPLVKHVLSKELQLYFDKVIQALTNQEDNEEVLHLKQAALTSLRSDPGLHQLVP 262
Query: 213 YFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 272
YF F++++++ NN +LL ++ V+++LL N +I ++PY+H LMP ++T L+AKR+G+
Sbjct: 263 YFVQFISEQITHNSNNIALLSTMLEVIYSLLSNSNIFLDPYIHALMPCILTLLLAKRIGS 322
Query: 273 RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGL 332
+ D H+ +RDF + L+ +CK YG Y TL+ R+T+TLL LD + + YGA+ GL
Sbjct: 323 QNDDEHFAVRDFASSLLEHVCKHYGKAYTTLKPRVTRTLLKTFLDSNKPVGTLYGAIIGL 382
Query: 333 AALGPNVVRLLLLPNL 348
LG VVR+++L NL
Sbjct: 383 QKLGEEVVRIIILGNL 398
>gi|328873717|gb|EGG22084.1| TATA-binding protein-associated-factor [Dictyostelium fasciculatum]
Length = 462
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/425 (37%), Positives = 249/425 (58%), Gaps = 61/425 (14%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS++PKET+++IA+ +GISN S + + LA DVEYRIREI+QE+IK M+HS+R L+TDD
Sbjct: 1 MSVLPKETIKIIAECVGISNLSDEISNQLASDVEYRIREIVQESIKFMKHSKREYLSTDD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 119
+++ALKLRN+E +YG+++ P +F + + ++Y+ D+++ F+D+I PLP+ P + S
Sbjct: 61 INDALKLRNIEVLYGYSNCEPHKFSKVQSPTQAIYYIHDRELNFQDIISQPLPKCPREPS 120
Query: 120 IVCHWLAIEGVQPVIPEN--------------------------------------APVQ 141
I HWLAIEGVQP+IP+N
Sbjct: 121 IAAHWLAIEGVQPLIPQNPSAAVIAAAHKASSSSSSSSSSTNNSNDQSTKKMKLDDQSQP 180
Query: 142 AIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSL 201
P+N + G +K VKH+L++E+Q++++K+ + LF+ + SL
Sbjct: 181 QSQQPTNTAESTTFTGDTAIVKPQVKHVLAKEMQMFYEKVVSSVNDLPNHTLFEGVVESL 240
Query: 202 ATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 261
TDS L+ L+PYFT F++ +V++ L N LL LMR+ +L++ H+ E YLHQ+MPS+
Sbjct: 241 RTDSSLNQLLPYFTNFISLQVTQNLTNLELLMRLMRMCRAILESTHLHAELYLHQMMPSM 300
Query: 262 VTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 321
+TCL+ ++L +NHW+LRD+ A ++ +CK+YG Y +LQ R+T+TLL AL D ++
Sbjct: 301 MTCLLGRKLCQSANENHWKLRDYVADILVLVCKKYGDSYGSLQGRITRTLLQALHDTSKS 360
Query: 322 LTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 381
L HYGA+ L+A LEPE L N+ K E RV AL+
Sbjct: 361 LPTHYGAIVALSA--------------------LEPE--LNNPSNQTKSLEVDRVVNALI 398
Query: 382 QAAGQ 386
++ G+
Sbjct: 399 KSIGK 403
>gi|410915422|ref|XP_003971186.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Takifugu rubripes]
Length = 636
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 232/377 (61%), Gaps = 32/377 (8%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
++P E+++ +A+SIG+ ++ +AL+ +V YRI+EI Q+A+K MRH +R LTT D+D
Sbjct: 13 VLPTESMKAMAESIGVGQLQEESCVALSEEVSYRIKEIAQDALKFMRHGKRRKLTTSDID 72
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
ALKL+NVEP+YGF S + FR A G R+L + ++K+V+ D+I PLPR PLD S+
Sbjct: 73 NALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINTPLPRVPLDVSLK 132
Query: 122 CHWLAIEGVQPVIPENAP---------------------------VQAIAAPSNGTNNEQ 154
HWL+IEG+QP IPEN P +Q + + +
Sbjct: 133 AHWLSIEGMQPAIPENPPPVPKEQQKVESTEPLKVVKPGQEEEGTIQGKTQGATAADGKG 192
Query: 155 KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYF 214
KD + +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F
Sbjct: 193 KDKGLIRLKPRSTHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRF 251
Query: 215 TYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 272
+ F+++ V + NN +LL LMR+V L+ NP + +E YLH+L+P+VVTC+V+K+L
Sbjct: 252 STFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVVTCIVSKQLCL 311
Query: 273 RL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG 331
R DNHW LRDF A+L+A CK + N +Q+R+TKT +LLD K T YG + G
Sbjct: 312 RPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSLLDDKTQWTTRYGCIAG 371
Query: 332 LAALGPNVVRLLLLPNL 348
LA LGP+V++ L+LP L
Sbjct: 372 LAELGPDVIKTLILPRL 388
>gi|47222523|emb|CAG02888.1| unnamed protein product [Tetraodon nigroviridis]
Length = 599
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 158/378 (41%), Positives = 233/378 (61%), Gaps = 33/378 (8%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
++P E+++ +A+S+G+ ++ +AL+ +V YRI+EI Q+A+K MRH +R LTT D+D
Sbjct: 13 VLPTESMKAMAESVGVGQLQEESCVALSEEVSYRIKEIAQDALKFMRHGKRRKLTTSDID 72
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
ALKL+NVEP+YGF S + FR A G R+L + ++K+V+ D+I PLPR PLD S+
Sbjct: 73 NALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINTPLPRVPLDVSLK 132
Query: 122 CHWLAIEGVQPVIPENAP---------------------------VQAIAAPSNGTNNE- 153
HWL+IEG+QP IPEN P +Q A + + +
Sbjct: 133 AHWLSIEGMQPAIPENPPPVPKEQQKVESTEPLKVVKPGQEEDGTIQGKAQGATAADGKG 192
Query: 154 QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPY 213
QK P ++ H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P
Sbjct: 193 QKGEGPDTVEAAQTHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPR 251
Query: 214 FTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG 271
F+ F+++ V + NN +LL LMR+V L+ NP + +E YLH+L+P+VVTC+V+K+L
Sbjct: 252 FSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVVTCIVSKQLC 311
Query: 272 NRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQ 330
R DNHW LRDF A+L+A CK + N +Q+R+TKT +LLD K T YG +
Sbjct: 312 LRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSLLDDKTQWTTRYGCIA 371
Query: 331 GLAALGPNVVRLLLLPNL 348
GLA LGP+V++ L+LP L
Sbjct: 372 GLAELGPDVIKTLILPRL 389
>gi|430814588|emb|CCJ28196.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 420
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 226/357 (63%), Gaps = 24/357 (6%)
Query: 45 IKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDV 101
+K MRH++RT LT D+ AL++ NVEP+YG+ + P+RF ++ G L+YL+D DV
Sbjct: 1 MKFMRHAKRTILTVSDISHALRVLNVEPLYGYHAFRPVRFGESLLEQGQPPLYYLEDDDV 60
Query: 102 EFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNG-----TNNEQKD 156
EF VI APLP+ P D S HWLAIEGVQP IP+N V + S NN
Sbjct: 61 EFDKVIHAPLPKVPRDISYSVHWLAIEGVQPAIPQNPSVSDTSVSSKKGFQVINNNSWTL 120
Query: 157 GLP---VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPY 213
P VE+K VKH++S+EL+LYF++I + ++ L AL SL DSGLH L+PY
Sbjct: 121 SGPSTGVEVKHLVKHVISKELRLYFERINSAILDENNERLRLAALASLRLDSGLHQLLPY 180
Query: 214 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPY--LHQLMPSVVTCLVAKRLG 271
F VA++++ L N +L +M+V W L NP++ IEPY LHQ++PS++TCLVAKRLG
Sbjct: 181 FVSLVAEKITHNLKNLFILNMMMQVTWALFDNPNLFIEPYVSLHQIIPSILTCLVAKRLG 240
Query: 272 -NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQ 330
N + +H+ LRD +A L+ IC+R+G VY+TL+ R+T+TLL A LD K+ T HYGA+
Sbjct: 241 ENAASQDHYALRDLSASLLGLICQRFGDVYHTLKPRITRTLLKAFLDNKKPFTTHYGAII 300
Query: 331 GLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEV----KRHEAWRVYGALLQA 383
GLA +G V+R+L++PN+ Y E+L++ N K+ EA + ALL +
Sbjct: 301 GLATMGKEVIRVLIMPNIKIY------ELLIKDDINSAELTFKKMEATKCLEALLNS 351
>gi|452840986|gb|EME42923.1| hypothetical protein DOTSEDRAFT_72382 [Dothistroma septosporum
NZE10]
Length = 447
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 170/395 (43%), Positives = 248/395 (62%), Gaps = 18/395 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E V +A+S+GI+ + D A LA DVEYR++++++EA+K MRH++RTTLTT D
Sbjct: 1 MSVWNPENVIDVAESVGIAALNRDVAEHLARDVEYRVQQLIEEALKFMRHAKRTTLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ +AL++ +VEP+YG+ S PLRF A IG + LFY++D++V+F+ +I APLP+ P +
Sbjct: 61 ISQALRVLDVEPLYGYESTRPLRFGEASIGPGQPLFYVEDEEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPENAPVQA------IAAPSNGTNN--EQKDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N P QA + A G N V++K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQN-PTQADQRNQELQAKGQGANTLAAMSGNDNVQVKNLVKHVL 179
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF++I + + A SL TD GLH LVPYF FVAD+V+ L +
Sbjct: 180 SKELQLYFERICAAILDEGNEEYRAAAFSSLQTDPGLHQLVPYFIQFVADKVTHNLKSLF 239
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLADNHWELRDFTAKLV 289
+L M++V LL+NP + I PY+ L+PSV+TCLV K LG + D H+ LRD+ + L+
Sbjct: 240 ILTQSMQLVAALLENPSLYIAPYVPSLVPSVLTCLVGKHLGPSNAGDIHFSLRDYASSLL 299
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
++I ++YG +TL+ R+ ++ L LD + L HYGAV GL + G VR L+LPNL
Sbjct: 300 SSIARKYGPSSSTLKPRIARSCLKHFLDSHKPLGTHYGAVLGLTMIAGGAGVRSLILPNL 359
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
Y L E K++ KR +A +V A+++
Sbjct: 360 KAY-----DVHLSECIKDDAKRADAEKVVEAIMRG 389
>gi|398393594|ref|XP_003850256.1| hypothetical protein MYCGRDRAFT_75105 [Zymoseptoria tritici IPO323]
gi|339470134|gb|EGP85232.1| hypothetical protein MYCGRDRAFT_75105 [Zymoseptoria tritici IPO323]
Length = 449
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/397 (42%), Positives = 246/397 (61%), Gaps = 20/397 (5%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E V +A+S+GI++ + D A LA DVEYRI ++++EA+K MRH++RTTLTT D
Sbjct: 1 MSVWNPENVTDVAESVGIASLNRDVAEHLARDVEYRISQVLEEALKFMRHAKRTTLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ +AL+L VEP+YG+ S PLRF A IG + LFY++D++V+F+ +I APLP+ P +
Sbjct: 61 ISQALRLLEVEPLYGYESTRPLRFGEASIGPGQPLFYVEDEEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPENAPVQA------IAAPSNGTNN--EQKDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N P QA +AA G N V +K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQN-PTQADQRNQELAAKGQGANTLAAVSGNDNVAVKPLVKHVL 179
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF++I + + AL SL TD G+H LVPYF FVAD+++ L +
Sbjct: 180 SKELQLYFERICSAILDELNEEYRTAALASLQTDPGIHQLVPYFIQFVADKITHNLKSLF 239
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN---HWELRDFTAK 287
+L ++++ LL+N + I PY+ ++PSV+TC+V K LG+ AD H+ LRD+ +
Sbjct: 240 ILTQSLQLINALLENRSLFIAPYVPSIIPSVLTCVVGKHLGSVSADGTTVHFSLRDYASS 299
Query: 288 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLP 346
+++ I ++YG +TL+ R+ ++ L LD + HYGAV GL + G VR L+LP
Sbjct: 300 ILSGIARKYGSSSSTLKPRIARSCLKHFLDSHKPFGTHYGAVLGLTMIAGAAGVRSLILP 359
Query: 347 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
NL Y E L K+E K +A V GA++QA
Sbjct: 360 NLKSY-----DEHLRGGLKDESKSEQAEYVVGAIMQA 391
>gi|449518903|ref|XP_004166475.1| PREDICTED: transcription initiation factor TFIID subunit 6-like,
partial [Cucumis sativus]
Length = 256
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/258 (60%), Positives = 191/258 (74%), Gaps = 8/258 (3%)
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
++ C R+GHVYNTLQT+LTKTLLNA LDPKRALTQHYGA+QGLAALG NVV LL+LPNL
Sbjct: 3 LSMFC-RFGHVYNTLQTKLTKTLLNAFLDPKRALTQHYGAIQGLAALGMNVVHLLILPNL 61
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWK 408
PYL LLEPEMLL QKNE+KRHEAWRVYGALL+A GQCIYD +KIFPPL S+PA S+ +
Sbjct: 62 EPYLGLLEPEMLLANQKNEMKRHEAWRVYGALLRAVGQCIYDHVKIFPPLPSMPAGSILR 121
Query: 409 TNG--IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDN 465
TN I T NKRK + D LE QPPLKK+ D P+ + T+S + ME A P +
Sbjct: 122 TNARVITTTFLNKRKENADHLEGQPPLKKMVMDSPMGVMPTNSSASHME---GAVNPASS 178
Query: 466 SDADHPSPSSVQ-IPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFEL 524
S++ P+S Q + ++ S S++ K D Q K SA+L QVWK+DL SGKLL S+ +L
Sbjct: 179 SNSSLILPTSSQPLQNETIPGSNSRKGKYDDQILKRSAVLSQVWKEDLKSGKLLTSMLDL 238
Query: 525 FGEGILSFIPAPEMSLFL 542
FGE +L FIPAPE+S+FL
Sbjct: 239 FGESMLCFIPAPELSMFL 256
>gi|432898459|ref|XP_004076512.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Oryzias latipes]
Length = 638
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/376 (41%), Positives = 230/376 (61%), Gaps = 32/376 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P E+++ +A+S+G+ ++ +AL+ +V YRI+EI Q+A+K M H +R LTT D+D
Sbjct: 14 LPTESMKAMAESVGVGQLQEESCVALSEEVSYRIKEIAQDALKFMHHGKRRKLTTSDIDN 73
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
ALKL+NVEP+YGF S + FR A G R+L + ++K+V+ D+I PLPR PLD S+
Sbjct: 74 ALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINTPLPRVPLDVSLKA 133
Query: 123 HWLAIEGVQPVIPENAP---------------------------VQAIAAPSNGTNNEQK 155
HWL+IEGVQP IPEN P +Q + + + K
Sbjct: 134 HWLSIEGVQPSIPENPPPATKEQQKTESTEPLKVVKPGQEEEGAIQGKGQGATAPDGKGK 193
Query: 156 DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFT 215
+ + +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+
Sbjct: 194 EKGSIRLKPRSTHELSVEQQLYYKEITEACVGSCEAK-RAEALQSIATDPGLYQMLPRFS 252
Query: 216 YFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 273
F+++ V + NN +LL LMR+V L+ NP + +E YLH+L+P+VVTC+V+K+L R
Sbjct: 253 TFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVVTCIVSKQLCLR 312
Query: 274 L-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGL 332
DNHW LRDF A+L+A CK + N +Q+R+TKTL + LD K T YG + GL
Sbjct: 313 PDVDNHWALRDFAARLMAQCCKTFSTTTNNIQSRITKTLTKSWLDEKTQWTARYGCIAGL 372
Query: 333 AALGPNVVRLLLLPNL 348
A LGP+V++ L+LP L
Sbjct: 373 AELGPDVIKTLILPRL 388
>gi|348665951|gb|EGZ05779.1| hypothetical protein PHYSODRAFT_341977 [Phytophthora sojae]
Length = 436
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 243/385 (63%), Gaps = 3/385 (0%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS++ ET++V+AQS+G+ + S D L P+VE R+RE++Q+A+K RHSRR L
Sbjct: 1 MSLLRSETLQVVAQSLGLDDLSDDCVRELLPEVELRVREVVQDALKFQRHSRRPQLDPTH 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
V++AL+ RN+E +YGF++ G +++++ LF+ +++++E +++ APL + PL +
Sbjct: 61 VNQALQARNLESLYGFSAPGTVKYKQCEDNDALFFAEEEELELGELLNAPLGQIPLHPVL 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
HWLA++GVQP+IPEN V+ + +E V+ K VKH+L+ E+QLY+ K
Sbjct: 121 NVHWLAVDGVQPLIPENESVEDDSTCHTSIKDEAFVN-NVDRKPRVKHVLTEEMQLYYTK 179
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
+TE AV D L + A SLA D G+H L+PYF+ F+ +EV ++ SLLF+LMR
Sbjct: 180 VTE-AVKSDDFELQRAAFTSLAQDPGIHQLLPYFSRFIYEEVKHSNHDLSLLFSLMRACR 238
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVY 300
LL N ++ +E YLHQL+P+++TC++ +L AD+HW LR + AKLVA IC+RYG Y
Sbjct: 239 CLLVNQNLHVELYLHQLIPAILTCVLGTQLCENPADDHWALRKYAAKLVAQICERYGEKY 298
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+Q R++KT A+ DP + YGA+ G+ LGP V+ LL PNL Y LEP L
Sbjct: 299 ANIQARVSKTYHKAITDPVCPFSTQYGALHGMLFLGPLVMESLLFPNLERYYRRLEP-AL 357
Query: 361 LEKQKNEVKRHEAWRVYGALLQAAG 385
N V+R EA G L+ A+G
Sbjct: 358 SSSNPNLVERLEAQNCLGILVHASG 382
>gi|384249979|gb|EIE23459.1| DUF1546-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 569
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/420 (40%), Positives = 244/420 (58%), Gaps = 40/420 (9%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS++ K V+ A+S+ + + + +AA AL P +E R+REI+Q+A K MRHS+R TL+T+D
Sbjct: 1 MSLLSKSIVQAFAESVAVGDLAPEAADALGPHLEVRLREIIQDASKFMRHSKRHTLSTED 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
++ AL L EP+YG+ S P F A G RD F++ D + ++V+ PLPR P++
Sbjct: 61 INSALILNLKEPIYGYGSKVPASFSTAQGLRDTFFVQDPLCDIQEVLAQPLPRCPVEVGT 120
Query: 121 VCHWLAIEGVQPVIPENAPVQ---------------------------------AIAAPS 147
+ HWLAIEG QP ENA ++ + A S
Sbjct: 121 LPHWLAIEGKQPATAENAVIERRKPTAKRTRTAAQLDSTPGMQPCKNSSFKMFSTVPAAS 180
Query: 148 NGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV----LFKQALVSLAT 203
+ +K+ + PV+H+LS+EL LY D++ L + D + L L SLA
Sbjct: 181 SSGRGSEKEERAAPVNGPVEHVLSQELLLYLDRVKGLL--QGDGIGGQHLEVGLLTSLAL 238
Query: 204 DSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
D GL PL+PY V++E+ + L + L L++VV LLQN H+ +E +LHQL+P +T
Sbjct: 239 DPGLSPLLPYLAQLVSEEIQKSLKSLRRLRLLLKVVRALLQNAHMALEGHLHQLIPVTLT 298
Query: 264 CLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT 323
CLVAK LG A++HW LRD A V A+ RYG Y +QTR+++ LL A LD R L
Sbjct: 299 CLVAKNLGGSPAEDHWSLRDAAAATVGAVIARYGADYPDVQTRISRQLLTAFLDSARPLA 358
Query: 324 QHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
HYGAV+GLAA+GP VVRLLL+P++ Y +LL+ + L + + V+R EA RV ALL A
Sbjct: 359 THYGAVRGLAAMGPRVVRLLLVPHMPAYSALLD-KALTGGRPSSVRRLEAERVRSALLSA 417
>gi|52218960|ref|NP_001004557.1| transcription initiation factor TFIID subunit 6 [Danio rerio]
gi|51858501|gb|AAH81612.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Danio rerio]
Length = 636
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 161/375 (42%), Positives = 233/375 (62%), Gaps = 30/375 (8%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
I+P ++++ +A+S+GI + D+ L L+ +V YRI+EI Q+A+K M H +R LTT D+D
Sbjct: 13 ILPTDSMKAMAESVGIGSLQEDSCLTLSEEVSYRIKEIAQDALKFMHHGKRCKLTTGDID 72
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
ALKL+NVEP+YGF S + FR A G R+L + ++K+V+ D+I PLPR PLD S+
Sbjct: 73 HALKLKNVEPLYGFQSEEFIPFRFASGGGRELHFYEEKEVDLSDIINTPLPRVPLDVSLK 132
Query: 122 CHWLAIEGVQPVIPENAP-----------VQAIAAPSNGTNNE---QKDG---LPVEIKL 164
HWL+I+GVQP IPEN P + + A G +E Q G + E+K
Sbjct: 133 AHWLSIDGVQPAIPENPPSASKEQQKAESTEPLKAVKPGQEDEGFIQAKGQSAVSAEVKG 192
Query: 165 PVK--------HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTY 216
K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+
Sbjct: 193 KEKMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFST 251
Query: 217 FVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL 274
F+++ V + NN +LL LMR+V L+ NP + +E YLH+L+P+VVTC+V+K+L R
Sbjct: 252 FISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVVTCIVSKQLCLRP 311
Query: 275 -ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 333
DNHW LRDF A+L+A CK + N +Q+R+TKT ALLD K T YG + GLA
Sbjct: 312 DVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKALLDEKTQWTTRYGCIAGLA 371
Query: 334 ALGPNVVRLLLLPNL 348
LG +V++ L++P L
Sbjct: 372 ELGHDVIKTLIIPRL 386
>gi|296412081|ref|XP_002835756.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629546|emb|CAZ79913.1| unnamed protein product [Tuber melanosporum]
Length = 472
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 248/410 (60%), Gaps = 28/410 (6%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ +T++ +++S+G++N + D A LA DVEYRI +++QEA+K MRH+RRTTL T D
Sbjct: 1 MSLWNGDTIKDVSESVGVANLNEDVAKNLAMDVEYRIHQVLQEALKFMRHARRTTLGTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ AL++ +VEP+YG+ S PLRF A +G + +FY++D +V+F+ +I APLP+ P D
Sbjct: 61 ISNALRVLDVEPLYGYESTRPLRFGEASLGQLQPIFYVEDDEVDFEKLINAPLPKVPRDV 120
Query: 119 SIVCHWLAIEGVQPVIPEN-APVQAI--------AAPSNGTNNEQKDGLP-----VEIKL 164
+ HWLAIEGVQP IP+N P +A A SN T + P V IK
Sbjct: 121 TFTGHWLAIEGVQPAIPQNPTPSEAARLSETTPKGASSNTTLSAASTLNPTTNETVTIKP 180
Query: 165 PVKHILSRELQLYFDKI-TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 223
VKH+LS+ELQLYF++I T + + + AL SL D GLH L+PYF F++++ +
Sbjct: 181 LVKHVLSKELQLYFERISTSITDESTTDTIRNAALASLRKDPGLHQLLPYFVQFISEKTT 240
Query: 224 RGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD------N 277
GL + L +M + LL+N IEPY+ L+P ++TCL+ K LG+ +D
Sbjct: 241 HGLRSLFTLTQMMSLTHALLENDSFFIEPYVSSLIPPILTCLIGKHLGSSSSDPHSQTPA 300
Query: 278 HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP 337
H+ LRD +A L+ +CKR+G +TL+ RLT+T L LDP + L HYG++ GLAA+G
Sbjct: 301 HYALRDLSASLLKLVCKRFGDSSHTLKPRLTRTCLKHFLDPAKPLPTHYGSIIGLAAIGG 360
Query: 338 -NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQ 386
VR+L+LPN Y E + LE + ++ EA AL+ Q
Sbjct: 361 REAVRVLILPNTKLY----EKVIRLEIEDEGPRKSEAEMCLSALVGVIKQ 406
>gi|212535258|ref|XP_002147785.1| transcription initiation factor TFIID complex 60 kDa subunit
[Talaromyces marneffei ATCC 18224]
gi|210070184|gb|EEA24274.1| transcription initiation factor TFIID complex 60 kDa subunit
[Talaromyces marneffei ATCC 18224]
Length = 447
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 227/368 (61%), Gaps = 13/368 (3%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GISN S D LA DVEYRI ++++EA+K MRH RRT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGISNLSKDVTENLARDVEYRIAQVLEEALKFMRHGRRTVLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ AL++ NVEP+YG+ S PLRF A +G + LFY++D++V+F+ +I APLP+ P +
Sbjct: 61 ISHALRVLNVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREV 120
Query: 119 SIVCHWLAIEGVQPVIPENAP------VQAIAAPSNGTNN--EQKDGLPVEIKLPVKHIL 170
+ HWLA+EGVQP+IP+N ++ +A N N +K VKHIL
Sbjct: 121 TFTAHWLAVEGVQPLIPQNPTSNESRNLELVAKGPNANPNLAAMSGNQNTAVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + S A SL D GLH LVPYF F+A++V+ LNN
Sbjct: 181 SKELQLYFEKVCNAFLDPSSEEYRTSAYSSLREDPGLHQLVPYFVQFIAEKVTHSLNNIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKL 288
+L +MR+ L+QN + I+PY+ L+P V+TCLV ++ G N + LR+ A L
Sbjct: 241 VLTQVMRMAEALIQNQFLYIDPYISALVPPVLTCLVGRQFGGSNNELSEQFALRELAASL 300
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPN 347
+ I K+Y H +TL+ R+ ++ L LDP + HYGA+ GL +L G +VVR L+LPN
Sbjct: 301 LGMISKKYSHASHTLKPRIARSCLKNFLDPAKPFGTHYGAIMGLHSLGGADVVRELILPN 360
Query: 348 LGPYLSLL 355
L PY LL
Sbjct: 361 LKPYDKLL 368
>gi|301623978|ref|XP_002941284.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Xenopus (Silurana) tropicalis]
Length = 622
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/385 (41%), Positives = 238/385 (61%), Gaps = 38/385 (9%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++VIA+S+G+S S + LA +V +RI+E+ Q+A+K M +R LT +D+
Sbjct: 10 TLLPSESMKVIAESVGVSQMSEETCQMLAQEVSFRIKEVTQDALKFMHVGKRQKLTPNDI 69
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + L FR A G R+L + ++K+V+ D+I PLPR PLD SI
Sbjct: 70 DAALKLKNVEPIYGFHAKEFLPFRYASGGGRELHFYEEKEVDLSDIISTPLPRVPLDVSI 129
Query: 121 VCHWLAIEGVQPVIPEN--------------APVQAI---------------AAPSNGTN 151
HWL+IEGVQP IPEN P++A+ A + G
Sbjct: 130 KAHWLSIEGVQPAIPENPPPVTKEQQKSEATEPLKAVKPGQEEGGLKGKGQGAGAAEGKG 189
Query: 152 NEQK----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGL 207
E+K +G P+++K H LS E QLY+ +ITE V ++ +AL S+ATD GL
Sbjct: 190 KEKKTPILEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEAK-RAEALQSIATDPGL 248
Query: 208 HPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCL 265
+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E YLH+L+P+V+TC+
Sbjct: 249 YQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVMTCI 308
Query: 266 VAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQ 324
V+++L R DNHW LRDF A+L+A ICK + N +Q+R+TKT +D + T
Sbjct: 309 VSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTKTWVDDRTPWTT 368
Query: 325 HYGAVQGLAALGPNVVRLLLLPNLG 349
YG++ GLA LGP+VV+ L++P L
Sbjct: 369 RYGSIAGLAELGPDVVKTLIVPRLA 393
>gi|301118558|ref|XP_002907007.1| transcription initiation factor TFIID subunit 6, putative
[Phytophthora infestans T30-4]
gi|262108356|gb|EEY66408.1| transcription initiation factor TFIID subunit 6, putative
[Phytophthora infestans T30-4]
Length = 436
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/385 (41%), Positives = 243/385 (63%), Gaps = 3/385 (0%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS++ ET++V+AQS+G+ + S + L P+VE R+R+++Q+A+K RHSRR L
Sbjct: 1 MSLLRPETLQVVAQSLGLDDISDECVCELLPEVELRVRQVVQDALKFQRHSRRPQLDPTH 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
V++AL+ RN+E +YGF++ G ++++ L++ +++++E +++ APL + PL +
Sbjct: 61 VNQALQARNLESLYGFSAPGNVKYKPCEDNETLYFAEEEELELNELLNAPLGQIPLQPVL 120
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
HWLA++GVQP+IPENA V+ + +E V+ K VKH+L+ E+QLY+ K
Sbjct: 121 NVHWLAVDGVQPLIPENASVEDDSTCHTSIKDEAFVS-NVDRKPRVKHVLTEEMQLYYTK 179
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
+TE AV D L + AL SLA D G+H L+PYF+ F+ +EV ++ SLLF+LMR
Sbjct: 180 VTE-AVKSDDFELQRAALTSLAQDPGIHQLLPYFSRFIYEEVKHSNHDLSLLFSLMRACR 238
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVY 300
LL N + +E YLHQL+P+++TC++ +L AD+HW LR + AKLVA IC+RYG Y
Sbjct: 239 CLLVNQSLHVELYLHQLIPAILTCVLGTQLCENPADDHWALRKYAAKLVAQICERYGEKY 298
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+Q R++KT A+ DP + YGA+ G+ LGP V+ LL P+L Y LEP L
Sbjct: 299 ANIQARVSKTYHKAITDPTCPFSTQYGALHGMLFLGPLVMESLLFPHLEKYYRRLEP-AL 357
Query: 361 LEKQKNEVKRHEAWRVYGALLQAAG 385
N V+R EA G L+ A+G
Sbjct: 358 SSSNPNLVQRLEAQNCLGILVHASG 382
>gi|50548001|ref|XP_501470.1| YALI0C05346p [Yarrowia lipolytica]
gi|49647337|emb|CAG81771.1| YALI0C05346p [Yarrowia lipolytica CLIB122]
Length = 482
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 258/424 (60%), Gaps = 39/424 (9%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ +A+++GISN D A LA DVEYRI E++++A+K MRHS+RTTL T DV EA
Sbjct: 12 PSDTVKDVAETLGISNLPDDVAKTLAMDVEYRIHEVIEQALKFMRHSKRTTLGTSDVGEA 71
Query: 65 LKLRNVEPVYGF---ASGGPLRFRRAIG--YRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 119
L+ NVEP+YG+ A+ + +R AI + L+Y+DD +V+F+ +I PLP+ P TS
Sbjct: 72 LRALNVEPLYGYEGVANEKSVSYREAITGPGQTLYYVDDDEVDFERLINQPLPKVPRATS 131
Query: 120 IVCHWLAIEGVQPVIPEN---APVQAIAAPSNG---TNNE---QKDGLPVEIKLPVKHIL 170
+ HW+AI+GVQP IP+N + ++A++ G TNN V++K VKH+L
Sbjct: 132 LTAHWVAIDGVQPAIPQNPLASDIRAMSVDLRGAQTTNNSIATINGSSDVKVKPLVKHVL 191
Query: 171 SRELQLYFDKITELAVSRSDSVL----------FKQ---ALVSLATDSGLHPLVPYFTYF 217
S+ELQLYFD++ + S+ V+ KQ AL SL D G H LVPYF F
Sbjct: 192 SKELQLYFDRVVGALMDGSEVVVTATGDEKEAAVKQHAAALSSLRNDPGFHQLVPYFVQF 251
Query: 218 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG------ 271
VA++V+ L N +L+ +++V+ LL NP + ++PY+H LMPSV+T ++AK++G
Sbjct: 252 VAEKVTHNLKNLPVLYTMLQVIDALLTNPTLFMDPYIHSLMPSVLTLILAKKIGPKPGHE 311
Query: 272 -----NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHY 326
+++ + + +RDF A L+A IC +Y +Y +L+ R +TLL A +DP + + Y
Sbjct: 312 DIVEDSQVTISQYSIRDFAASLLARICDKYNEIYASLKPRAIRTLLKAFMDPTKPIPTLY 371
Query: 327 GAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWR-VYGALLQAAG 385
GA+QG+ ALG VR++++ NL + L +L + ++ + + + AL Q G
Sbjct: 372 GALQGIQALGNEAVRVVIVGNLKLWSDTLYNRLLKSSSDSTLELEQLNKCLISALRQIKG 431
Query: 386 QCIY 389
Q IY
Sbjct: 432 QAIY 435
>gi|452982675|gb|EME82434.1| hypothetical protein MYCFIDRAFT_154945 [Pseudocercospora fijiensis
CIRAD86]
Length = 449
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 248/398 (62%), Gaps = 21/398 (5%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E V +A+S+GI++ + + + LA DVEYRI ++++EA+K MRH++RTTLTT D
Sbjct: 1 MSVWNPENVTDVAESVGIASLNKEVSEHLARDVEYRIAQVLEEALKFMRHAKRTTLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ +AL++ +VEP+YG+ S PLRF A IG + LFY++D++V+F+ +I APLP+ P +
Sbjct: 61 ISQALRVLDVEPLYGYDSTRPLRFGEASIGQGQPLFYVEDEEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPENAPVQA------IAAPSNGTN---NEQKDGLPVEIKLPVKHI 169
S HWLA+EGVQP IP+N P QA +AA G N V +K VKH+
Sbjct: 121 SFTAHWLAVEGVQPSIPQN-PTQADQRNQELAAKGQGANPTLAAMSGNDNVSVKPLVKHV 179
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 229
LS+ELQLYFD+I + ++ A SL TD GLH LVPYF FVAD+V+ + +
Sbjct: 180 LSKELQLYFDRICTAIMDENNEDNRLAAFASLRTDPGLHQLVPYFIQFVADKVTHHMKSL 239
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN---HWELRDFTA 286
+L M+++ +LL NP + I PY+ ++P V+TCLV K LG+ +D H+ LRD++A
Sbjct: 240 FILTQSMQLLASLLDNPSLYIAPYVPSVIPCVLTCLVGKHLGSANSDGATTHFSLRDYSA 299
Query: 287 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLL 345
L++ I +++G +TL+ R+ ++ L LD + HYGAV GL + G + VR L+L
Sbjct: 300 SLLSTIARKFGPSSSTLKPRIARSCLKHFLDSHKPFGTHYGAVLGLTFIAGADGVRSLIL 359
Query: 346 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
PNL Y L E K+E K+ +A V A++ A
Sbjct: 360 PNLKAY-----DMHLSEGIKDEAKKEQAEYVVLAIMTA 392
>gi|121718305|ref|XP_001276165.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus clavatus NRRL 1]
gi|119404363|gb|EAW14739.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus clavatus NRRL 1]
Length = 448
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 240/393 (61%), Gaps = 16/393 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI N S D LA DVEYRI ++++EA+K MRHSRRT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGIVNLSNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V +AL++ +VEP+YG+ + PLRF A +G + LFY++D++V+F+ +I APLP+ P +
Sbjct: 61 VAQALRVLDVEPLYGYETTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
S HWLA+EGVQP IP+N A + + S G N N + V +K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPTAADSRNLELTSKGPNANSTLAAMSGTGNVAVKPLVKHVL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + S SL D GLH LVPYF F++++V+ GL +
Sbjct: 181 SKELQLYFEKVCNAFLDESSEEYRTSGYASLREDPGLHQLVPYFVQFISEKVTHGLKDIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLV 289
+L +M + L+QN + ++PY+ L+P ++TCL+ ++L GN + LRD A L+
Sbjct: 241 VLTQVMHMAEALVQNKSLYVDPYVASLVPPILTCLIGRQLGGNTDLSGQFALRDLAASLL 300
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP-NVVRLLLLPNL 348
I K+Y H +TL RL ++ L LDP + HYGAV GL A+G VR+L+LPNL
Sbjct: 301 GLISKKYSHSSHTLTPRLARSCLKTFLDPSKPFGAHYGAVIGLNAVGGVEAVRVLILPNL 360
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 381
Y SLL+ M ++ +R EA +V G LL
Sbjct: 361 STYASLLKDGM----AEDNPRRPEAEKVLGVLL 389
>gi|119498819|ref|XP_001266167.1| transcription initiation factor TFIID complex 60 kDa subunit
[Neosartorya fischeri NRRL 181]
gi|119414331|gb|EAW24270.1| transcription initiation factor TFIID complex 60 kDa subunit
[Neosartorya fischeri NRRL 181]
Length = 445
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 237/393 (60%), Gaps = 16/393 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI N S D LA DVEYRI ++++EA+K MRHSRRT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGIVNLSNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V +AL++ +VEP+YG+ + PLRF A +G + LFY++D++V+F+ +I APLP+ P +
Sbjct: 61 VAQALRVLDVEPLYGYETTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQKDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N + A +N T V +K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPTAADSRNLELTAKGPNANSTLAAMSGTGNVAVKPLVKHVL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + S SL D GLH LVPYF F++++V+ GL +
Sbjct: 181 SKELQLYFEKVCNAFLDESSEEYRTSGYASLREDPGLHQLVPYFVQFISEKVTHGLKDIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLV 289
+L +M + L+QN + ++PY+ L+P ++TCL+ ++L GN + LRD A L+
Sbjct: 241 VLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGNADLSEQFALRDLAASLL 300
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
I K+Y H +TL RL ++ L LDP + HYGAV GL A+ G VR+L+LPNL
Sbjct: 301 GLISKKYSHSSHTLTPRLARSCLKTFLDPSKPFGAHYGAVIGLNAVGGTEAVRVLILPNL 360
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 381
Y +LL M ++ +R EA +V GALL
Sbjct: 361 STYATLLADGM----AEDNPRRPEAEKVLGALL 389
>gi|449298254|gb|EMC94271.1| hypothetical protein BAUCODRAFT_227564 [Baudoinia compniacensis
UAMH 10762]
Length = 452
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 242/396 (61%), Gaps = 18/396 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E V +A+S+GI++ + D LA DVEYR+ +++ EA+K MRH++RTTLTT D
Sbjct: 1 MSVWNPENVIDVAESVGIASLNKDVVEHLARDVEYRMSQVLNEALKFMRHAKRTTLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V +AL+L +VEP+YG+ S PLRF A IG + LFY++D++V+F+ +I APLPR P +
Sbjct: 61 VSQALRLLDVEPLYGYESTRPLRFGEASIGPGQPLFYVEDEEVDFEKLINAPLPRVPREM 120
Query: 119 SIVCHWLAIEGVQPVIPEN-------APVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILS 171
S HWLA+EGVQP IP+N A + A + +N T V +K VKH+LS
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPLTDPRSAELAAKGSGANSTLAAISGNDNVSVKPLVKHVLS 180
Query: 172 RELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 231
+ELQLYF++I + + A VSL TD+GLH LVPYF F AD+V+ L + +
Sbjct: 181 KELQLYFERICSAVLDEGNDEYRSAAFVSLRTDTGLHQLVPYFVQFAADKVTHNLKSIFV 240
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN---HWELRDFTAKL 288
L M+++ LL N + + PY+ ++PSV+TCL+ K LG+ D H+ LRD+ A L
Sbjct: 241 LSQTMQLLDALLDNKSLYLAPYVPGIIPSVLTCLIGKHLGSPAQDGATTHFALRDYAASL 300
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPN 347
++ I ++Y +TL+ R+ ++ L + LD + HYGA+ GL + G VR L+LPN
Sbjct: 301 LSKIARQYASSSSTLKPRIARSCLKSFLDSHKPYGTHYGAILGLTMIAGAEGVRALILPN 360
Query: 348 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
L Y LLE ++ K+ +A V AL++A
Sbjct: 361 LKAY-----DMHLLEGMNDDSKKEQAEYVVQALMRA 391
>gi|325179833|emb|CCA14236.1| transcription initiation factor TFIID subunit 6 puta [Albugo
laibachii Nc14]
Length = 449
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/389 (38%), Positives = 236/389 (60%), Gaps = 5/389 (1%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS++ +E ++VIAQS+G + S ++ L P+VE R+REI+Q+AIK H++R L+T D
Sbjct: 1 MSVLRQEMIQVIAQSLGFDDLSDESIDDLLPEVEVRVREIIQDAIKFRNHAKRRKLSTRD 60
Query: 61 VDEALKLRNVEPVYGFASG----GPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPL 116
+++AL+ R++EP+YGF S G + + + L++ +D++ ++++EA P P+
Sbjct: 61 INQALQARHLEPLYGFQSCSLDHGIIPLQACKEHATLYFYNDQEWNLQELLEAVFPPIPI 120
Query: 117 DTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQL 176
+ + HWLAI GVQP IPEN + + ++ K VKH+L+ E+Q+
Sbjct: 121 EPCVRMHWLAIGGVQPQIPENECTHNSKESDFASMQHEDSTQQIDRKPLVKHVLTEEMQV 180
Query: 177 YFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALM 236
Y+ K+TE ++D L + A S++ D G+ L+PY + FV +EV + S+L +LM
Sbjct: 181 YYSKLTEAIKQQTDLELQRAAFHSISQDPGMRQLLPYVSRFVYEEVKNSNRDLSILVSLM 240
Query: 237 RVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRY 296
RV LL NPH++IE YLHQL+P++++C++ +L A+NHW LRD A+L+A ICK+Y
Sbjct: 241 RVCRCLLVNPHLRIELYLHQLLPALLSCVLGHQLCENAAENHWALRDHAAQLIATICKKY 300
Query: 297 GHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 356
G Y LQ R++KT A+ DP + YGA+ GL LGP V+ LL PNL Y LE
Sbjct: 301 GETYEKLQARVSKTYHLAISDPHCPFSTQYGAINGLMYLGPLVMEKLLFPNLPMYYKRLE 360
Query: 357 PEMLLEKQKNEVKRHEAWRVYGALLQAAG 385
P L + ++R EA G L+ A+G
Sbjct: 361 P-ALSSSNPDLIQRLEAQNCLGTLVHASG 388
>gi|70984940|ref|XP_747976.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus fumigatus Af293]
gi|66845604|gb|EAL85938.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus fumigatus Af293]
gi|159126099|gb|EDP51215.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus fumigatus A1163]
Length = 445
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 236/393 (60%), Gaps = 16/393 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI N S D LA DVEYRI ++++EA+K MRHSRRT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGIVNLSNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V +AL++ +VEP+YG+ + PLRF A +G + LFY++D++V+F+ +I APLP+ P +
Sbjct: 61 VAQALRVLDVEPLYGYETTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN--------APVQAIAAPSNGTNNEQKDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N + A +N T V +K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPTAADSRNLELTAKGPNANSTLAAMSGTGDVAVKPLVKHVL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + S SL D GLH LVPYF F++++V+ GL +
Sbjct: 181 SKELQLYFEKVCNAFLDESSEEYRTSGYASLREDPGLHQLVPYFVQFISEKVTHGLKDIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLV 289
+L +M + L+QN + ++PY+ L+P ++TCL+ ++L GN + LRD L+
Sbjct: 241 VLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGNADLSEQFALRDLAGSLL 300
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
I K+Y H +TL RL ++ L LDP + HYGA+ GL A+ G VR+L+LPNL
Sbjct: 301 GLISKKYSHSSHTLTPRLARSCLKTFLDPSKPFGAHYGAIIGLHAVGGTEAVRVLILPNL 360
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 381
Y +LL M ++ +R EA +V GALL
Sbjct: 361 STYATLLADGM----AEDNPRRPEAEKVLGALL 389
>gi|452821588|gb|EME28617.1| transcription initiation factor TFIID subunit D5 [Galdieria
sulphuraria]
Length = 459
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/384 (40%), Positives = 242/384 (63%), Gaps = 8/384 (2%)
Query: 6 KETVEVIAQSI-GISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
KET + +AQ I G+ + S D ++A+ D EYR+R+++QE++K MR+S+RT L D++ A
Sbjct: 8 KETCQAVAQYILGVESVSEDVSIAIIEDTEYRLRQLLQESVKFMRNSKRTKLLPKDINSA 67
Query: 65 LKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
L+L N+EP++G+++ +FR L+ LDD V+ K ++ PLP+AP + ++ HW
Sbjct: 68 LRLENMEPIFGYSAPRRKQFRVVKSCPGLYVLDDDLVDLKRALDEPLPKAPFEPALEAHW 127
Query: 125 LAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITEL 184
LA+EGVQP I +N P++ + T+ + +PVE P+KH LS+E QL +D + +
Sbjct: 128 LAVEGVQPAIWQN-PLRDQLKDAKTTS----ESVPVEALKPLKHALSKEFQLLYDHVISI 182
Query: 185 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQ 244
+ D K L LA G+ LVPYFT ++ +EV N LF++M++ L+
Sbjct: 183 -LRDEDGEKKKACLRELARQPGIQQLVPYFTLYIHEEVRLYHNFTERLFSVMQLTRALIT 241
Query: 245 NPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQ 304
NP+I IEPYLHQ+MPSV+TC++ K+L + D HW LRD+++ ++ I K +G Y TLQ
Sbjct: 242 NPNIHIEPYLHQVMPSVLTCILGKKLCSSWMDPHWHLRDYSSSVLGFIYKHFGPNYATLQ 301
Query: 305 TRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQ 364
TR+TKTL++ALLD KR L+ YGA+ GL +LG V++ L+P+L PYLS L
Sbjct: 302 TRVTKTLISALLDEKRPLSTRYGAIVGLVSLGVCEVQICLMPHL-PYLSQQTEAELHRSD 360
Query: 365 KNEVKRHEAWRVYGALLQAAGQCI 388
+ ++ ++YGAL+ AA C+
Sbjct: 361 LEDERKLSLAKIYGALILAAHVCL 384
>gi|134078474|emb|CAL00337.1| unnamed protein product [Aspergillus niger]
Length = 449
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 237/393 (60%), Gaps = 16/393 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+G+ N S D LA DVEYRI ++++EA+K MRHSRRT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGVVNLSNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V +AL++ +VEP+YG+ S PLRF A +G + LFY++D++V+F+ +I APLPR P +
Sbjct: 61 VAQALRVLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNEQ-----KDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N A + + S G N G V +K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPTAADSRNMELMSKGPNASSTLAAMSGGGNVSVKPLVKHVL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + S SL D GLH LVPYF F++++V+ GL +
Sbjct: 181 SKELQLYFEKVCNAFLDESSEEYRTSGYASLREDPGLHQLVPYFVQFISEKVTHGLKDVF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-DNHWELRDFTAKLV 289
+L +M + L+QN + ++PY+ L+P ++TCL+ ++LG + LRD A L+
Sbjct: 241 VLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGSAELTEQFALRDLAASLL 300
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
I K+Y + +TL+ RL ++ L LDP + HYGAV GL A+ G VR+L++PNL
Sbjct: 301 GLIAKKYSNSSHTLKPRLARSCLKTFLDPSKPFGAHYGAVIGLHAVGGAEAVRVLIMPNL 360
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 381
Y +LL+ M E +R EA RV LL
Sbjct: 361 PTYGNLLKDGMAEESP----RRPEAERVLSVLL 389
>gi|326469026|gb|EGD93035.1| transcription initiation factor TFIID subunit 6 [Trichophyton
tonsurans CBS 112818]
Length = 447
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 251/424 (59%), Gaps = 30/424 (7%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI++ + D L+ DVEYRI ++++EA+K MRH +RT LTT D
Sbjct: 1 MSLWNPDNIRDVAESVGINSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+ +I APLP+ P +
Sbjct: 61 VSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNE-----QKDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N A + + S G N V IK VKHIL
Sbjct: 121 SFTAHWLAVEGVQPTIPQNPTAADTRHLELVSKGPNANANLAAMSGNENVNIKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S ELQLYF+++ + S+ A SL D GLH LVPYF F++++V+ + +
Sbjct: 181 SNELQLYFERVCNAFLDESNEEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNIKDIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLADNHWELRDFTAKLV 289
+L +M ++ L++NP + I+PY+ L+P V+TCL+ ++LG + A H+ LRD ++ LV
Sbjct: 241 VLTQVMHMIEALIRNPTLYIDPYVAPLIPPVLTCLIGRQLGSSNDAVEHFALRDLSSSLV 300
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
I K+Y +TL+ RL +T L LDP + HYGA+ GL ++ GPNV+R L++PNL
Sbjct: 301 GMIAKKYSQSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIGGPNVIRELIIPNL 360
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWK 408
Y +L+ + E +++ EA +V G ++ LS++ S+
Sbjct: 361 PVYEVVLKDAVTDEG----LRKAEAEKVTGVIIAV--------------LSTIQDESLAH 402
Query: 409 TNGI 412
TNG
Sbjct: 403 TNGF 406
>gi|317031631|ref|XP_001393919.2| transcription initiation factor TFIID complex subunit [Aspergillus
niger CBS 513.88]
gi|350640200|gb|EHA28553.1| hypothetical protein ASPNIDRAFT_56887 [Aspergillus niger ATCC 1015]
Length = 447
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 237/393 (60%), Gaps = 16/393 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+G+ N S D LA DVEYRI ++++EA+K MRHSRRT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGVVNLSNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V +AL++ +VEP+YG+ S PLRF A +G + LFY++D++V+F+ +I APLPR P +
Sbjct: 61 VAQALRVLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNEQ-----KDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N A + + S G N G V +K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPTAADSRNMELMSKGPNASSTLAAMSGGGNVSVKPLVKHVL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + S SL D GLH LVPYF F++++V+ GL +
Sbjct: 181 SKELQLYFEKVCNAFLDESSEEYRTSGYASLREDPGLHQLVPYFVQFISEKVTHGLKDVF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-DNHWELRDFTAKLV 289
+L +M + L+QN + ++PY+ L+P ++TCL+ ++LG + LRD A L+
Sbjct: 241 VLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGSAELTEQFALRDLAASLL 300
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
I K+Y + +TL+ RL ++ L LDP + HYGAV GL A+ G VR+L++PNL
Sbjct: 301 GLIAKKYSNSSHTLKPRLARSCLKTFLDPSKPFGAHYGAVIGLHAVGGAEAVRVLIMPNL 360
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 381
Y +LL+ M E +R EA RV LL
Sbjct: 361 PTYGNLLKDGMAEESP----RRPEAERVLSVLL 389
>gi|358371612|dbj|GAA88219.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus kawachii IFO 4308]
Length = 447
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 237/393 (60%), Gaps = 16/393 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+G+ N S D LA DVEYR+ ++++EA+K MRHSRRT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGVVNLSNDVTENLARDVEYRVAQVLEEALKFMRHSRRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V +AL++ +VEP+YG+ S PLRF A +G + LFY++D++V+F+ +I APLPR P +
Sbjct: 61 VAQALRVLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNEQ-----KDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N A + + S G N G V +K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPTAADSRNMELMSKGPNASSTLAAMSGGGNVSVKPLVKHVL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + S SL D GLH LVPYF F++++V+ GL +
Sbjct: 181 SKELQLYFEKVCNAFLDESSEEYRTSGYASLREDPGLHQLVPYFVQFISEKVTHGLKDVF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-DNHWELRDFTAKLV 289
+L +M + L+QN + ++PY+ L+P ++TCL+ ++LG + LRD A L+
Sbjct: 241 VLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGSAELTEQFALRDLAASLL 300
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
I K+Y + +TL+ RL ++ L LDP + HYGAV GL A+ G VR+L++PNL
Sbjct: 301 GLIAKKYSNSSHTLKPRLARSCLKTFLDPSKPFGAHYGAVIGLHAVGGAEAVRVLIMPNL 360
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 381
Y +LL+ M E +R EA RV LL
Sbjct: 361 PTYGNLLKDGMAEESP----RRPEAERVLSVLL 389
>gi|344307803|ref|XP_003422568.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Loxodonta africana]
Length = 725
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 235/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 59 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 118
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 119 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 178
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AAP++G
Sbjct: 179 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPADGK 238
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 239 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 297
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 298 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 357
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 358 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 417
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 418 TTRYGSIAGLAELGHDVIKTLILPRL 443
>gi|326480649|gb|EGE04659.1| transcription initiation factor TFIID subunit 6 [Trichophyton
equinum CBS 127.97]
Length = 447
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 251/424 (59%), Gaps = 30/424 (7%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI++ + D L+ DVEYRI ++++EA+K MRH +RT LTT D
Sbjct: 1 MSLWNPDNIRDVAESVGINSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+ +I APLP+ P +
Sbjct: 61 VSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPENAP------VQAIAAPSNGTNN--EQKDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N ++ ++ N N V IK VKHIL
Sbjct: 121 SFTAHWLAVEGVQPTIPQNPTATDTRHLELVSKGPNANANLAAMSGNENVNIKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S ELQLYF+++ + S+ A SL D GLH LVPYF F++++V+ + +
Sbjct: 181 SNELQLYFERVCNAFLDESNEEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNIKDIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLADNHWELRDFTAKLV 289
+L +M ++ L++NP + I+PY+ L+P V+TCL+ ++LG + A H+ LRD ++ LV
Sbjct: 241 VLTQVMHMIEALIRNPTLYIDPYVAPLIPPVLTCLIGRQLGSSNDAVEHFALRDLSSSLV 300
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
I K+Y +TL+ RL +T L LDP + HYGA+ GL ++ GPNV+R L++PNL
Sbjct: 301 GMIAKKYSQSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIGGPNVIRELIIPNL 360
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWK 408
Y +L+ + E +++ EA +V G ++ LS++ S+
Sbjct: 361 PVYEVVLKDAVTDEG----LRKAEAEKVTGVIIAV--------------LSTIQDESLAH 402
Query: 409 TNGI 412
TNG
Sbjct: 403 TNGF 406
>gi|301790893|ref|XP_002930450.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
isoform 1 [Ailuropoda melanoleuca]
gi|281347883|gb|EFB23467.1| hypothetical protein PANDA_020897 [Ailuropoda melanoleuca]
Length = 678
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 235/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AAP++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|148233408|ref|NP_001081232.1| transcription initiation factor TFIID subunit 6 [Xenopus laevis]
gi|229463009|sp|Q91857.3|TAF6_XENLA RecName: Full=Transcription initiation factor TFIID subunit 6;
Short=xTAF6; AltName: Full=Transcription initiation
factor TFIID 60 kDa subunit; Short=TAF(II)60;
Short=TAFII-60; Short=TAFII60; AltName:
Full=Transcription initiation factor TFIID 70 kDa
subunit; Short=TAF(II)70; Short=TAFII-70; Short=TAFII70
gi|46250328|gb|AAH68776.1| LOC397724 protein [Xenopus laevis]
Length = 618
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/381 (41%), Positives = 234/381 (61%), Gaps = 35/381 (9%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++VI++S+GIS S + LA +V +RI+E+ Q+A+K M +R LT D+
Sbjct: 10 TLLPSESMKVISESVGISQMSEETCQLLAQEVSFRIKEVTQDALKFMHVGKRQKLTPSDI 69
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF L FR A G R+L + ++K+ + D+I PLPR PLD S+
Sbjct: 70 DAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETDLSDIISTPLPRVPLDVSL 129
Query: 121 VCHWLAIEGVQPVIPENAP--------VQA-----IAAPSN-------------GTNNEQ 154
HWL+IEGVQP IPEN P +A +A P G E+
Sbjct: 130 KAHWLSIEGVQPAIPENPPPVPKEQQKTEATEPLKVAKPGQEEGLPGKGQGSGEGKGKEK 189
Query: 155 K----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 210
K +G P+++K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ +
Sbjct: 190 KTAILEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEAK-RAEALQSIATDPGLYQM 248
Query: 211 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 268
+P F+ F+++ V + NN +LL LMR+V L+ NP + +E YLH+L+P+V+TC+V++
Sbjct: 249 LPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVMTCIVSR 308
Query: 269 RLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 327
+L R DNHW LRDF A+L+A ICK + N +Q+R+TKT +D + T YG
Sbjct: 309 QLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTKTWVDDRTPWTTRYG 368
Query: 328 AVQGLAALGPNVVRLLLLPNL 348
++ GLA LGP+VV+ L++P L
Sbjct: 369 SIAGLAELGPDVVKTLIVPRL 389
>gi|73957898|ref|XP_546964.2| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Canis lupus familiaris]
Length = 678
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 235/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AAP++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKAQGAAPADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|315049401|ref|XP_003174075.1| transcription initiation factor TFIID subunit 6 [Arthroderma
gypseum CBS 118893]
gi|311342042|gb|EFR01245.1| transcription initiation factor TFIID subunit 6 [Arthroderma
gypseum CBS 118893]
Length = 448
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/423 (38%), Positives = 251/423 (59%), Gaps = 30/423 (7%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI++ + D L+ DVEYRI ++++EA+K MRH +RT LTT D
Sbjct: 1 MSLWNPDNIRDVAESVGINSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+ +I APLP+ P +
Sbjct: 61 VSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNE-----QKDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N A + + S G N V +K VKHIL
Sbjct: 121 SFTAHWLAVEGVQPTIPQNPTSADTRHLELVSKGPNANANLAAMSGNENVNVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S ELQLYF+++ + S+ A SL D GLH LVPYF F++++V+ + +
Sbjct: 181 SNELQLYFERVCNAFLDESNEEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNIKDIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLADNHWELRDFTAKLV 289
+L +M ++ L++NP + ++PY+ L+P V+TCL+ ++LG + A H+ LRD ++ LV
Sbjct: 241 VLTQVMHMIEALIRNPTLYVDPYVAPLIPPVLTCLIGRQLGSSNDAVEHFALRDLSSSLV 300
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
I K+Y +TL+ RL +T L LDP + HYGA+ GL ++ GPNV+R L++PNL
Sbjct: 301 GMIAKKYSQSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIGGPNVIRELIIPNL 360
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWK 408
Y +L+ + E +++ EA +V G ++ LS++ S+
Sbjct: 361 PVYEVVLKDAVTDEG----LRKAEAEKVTGVIIAV--------------LSTIQDESLAH 402
Query: 409 TNG 411
TNG
Sbjct: 403 TNG 405
>gi|62752037|ref|NP_001015525.1| transcription initiation factor TFIID subunit 6 [Bos taurus]
gi|61553904|gb|AAX46477.1| TBP-associated factor 6 isoform alpha [Bos taurus]
gi|296472919|tpg|DAA15034.1| TPA: TBP-associated factor 6 [Bos taurus]
Length = 678
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 235/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AAP++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|154757685|gb|AAI51670.1| TAF6 protein [Bos taurus]
Length = 439
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 235/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AAP++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|443732927|gb|ELU17490.1| hypothetical protein CAPTEDRAFT_183030 [Capitella teleta]
Length = 602
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/374 (41%), Positives = 228/374 (60%), Gaps = 28/374 (7%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
V E ++V+A+SIGI N A+ L+ D YRI++I+QEA K M H +R L D+D
Sbjct: 15 VTSECLKVMAESIGIGNLPDGASDCLSSDATYRIKQIIQEAQKFMMHGKRRKLIPTDIDN 74
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
AL+L+N+EP+YGF + FR A G R++F+ ++K++E D+I APLP+ PLD +I
Sbjct: 75 ALRLKNIEPLYGFHASEYTPFRHASGGGREVFFQEEKELELADIINAPLPKIPLDITIKA 134
Query: 123 HWLAIEGVQPVIPENAPVQAIAA----------------PSNGTN-NEQKDGLPVEIKLP 165
HWL+IEG QP +PEN P ++ A P N N K V+I+
Sbjct: 135 HWLSIEGQQPAVPENPPAVSLDAQKLEALDPNVKASILKPKAKANLNPVKTKHKVKIQEK 194
Query: 166 VK------HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
VK H +S E QLY+ +ITE V SD +AL SLATD GLH ++P F+ F+A
Sbjct: 195 VKIKEVTTHEMSVEQQLYYKEITESCVG-SDENRRSEALQSLATDPGLHQMLPRFSTFIA 253
Query: 220 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LAD 276
+ V + NN +LL LMR+V +LL NP + +E YLH+L+P++ TC+++K+L R D
Sbjct: 254 EGVKVNVVQNNLALLIYLMRMVKSLLDNPTLYLEKYLHELVPAIATCIISKQLCLRPEVD 313
Query: 277 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALG 336
NHW LRDF ++ +A +CK++ N++Q+R+TK +L D K AL HYGA+ GL LG
Sbjct: 314 NHWALRDFASRQMAQVCKQFSSSTNSMQSRVTKIFTTSLQDEKAALASHYGALTGLGELG 373
Query: 337 PNVVRLLLLPNLGP 350
V++ +LP + P
Sbjct: 374 TEVIKAFILPYVKP 387
>gi|190345333|gb|EDK37202.2| hypothetical protein PGUG_01300 [Meyerozyma guilliermondii ATCC
6260]
Length = 489
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/390 (40%), Positives = 228/390 (58%), Gaps = 47/390 (12%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV +A+S+GI N +AA LA DVEYRI EI++ AIK MRHS+R TLTT+D+ A
Sbjct: 16 PHDTVGDVAESLGI-NLPEEAAKNLAMDVEYRIHEILETAIKFMRHSKRKTLTTEDISHA 74
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ N+EP+YG+ + PL F+ + + L+Y+DD ++EF+ +I LP+ P +
Sbjct: 75 LKVFNIEPLYGYDNSQPLNFKETMVGASGQTLYYIDDNEIEFEKLINQELPKVPRQATFT 134
Query: 122 CHWLAIEGVQPVIPENAPVQAI------------------------------AAPSNGTN 151
HWLAIEGVQP+IP+N I A +NG+
Sbjct: 135 AHWLAIEGVQPMIPQNPLPSEIKNLPPVLRGATTSILGNDILSYANGDGAKDAEAANGST 194
Query: 152 NEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLFKQALVSLATDSGLHP 209
QK EIK VKH+LS+EL+LYFDK++E+ VS L AL SL +D GLH
Sbjct: 195 KAQKTEKNTEIKPLVKHVLSKELKLYFDKVSEVLVSSDPEKQELKDAALTSLKSDPGLHQ 254
Query: 210 LVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKR 269
LVPYF FVA++++ L N +LF ++ V+ L +N I +EPY+H LMP ++T L+AK+
Sbjct: 255 LVPYFIQFVAEQITNQLRNIDILFTMLEVISALAENSTIFLEPYVHALMPCILTLLLAKK 314
Query: 270 LGNRLAD-----------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 318
+ + + N +R+F A L+ I K YG Y+TL+ R+T+TLL ALLDP
Sbjct: 315 ISSAPKEQTEEEEKAALKNQLAVREFAAILLEHIVKVYGSSYSTLRPRVTRTLLRALLDP 374
Query: 319 KRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
+ YGA+ GL +G V++ +L+ NL
Sbjct: 375 SKPTGTQYGALLGLKNMGSEVIKFVLVGNL 404
>gi|296817097|ref|XP_002848885.1| transcription initiation factor TFIID subunit 6 [Arthroderma otae
CBS 113480]
gi|238839338|gb|EEQ29000.1| transcription initiation factor TFIID subunit 6 [Arthroderma otae
CBS 113480]
Length = 446
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/423 (38%), Positives = 251/423 (59%), Gaps = 30/423 (7%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GIS+ + D L+ DVEYRI ++++EA+K MRH +RT LTT D
Sbjct: 1 MSLWNPDNIRDVAESVGISSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+ +I APLP+ P +
Sbjct: 61 VSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNE-----QKDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N A + + S G N V IK VKHIL
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPTAADTRHLELVSKGPNANANLAAMSGNENVNIKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S ELQLYF+++ + S+ A SL D GLH LVPYF F++++V+ + +
Sbjct: 181 SNELQLYFERVCNAFLDDSNEEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNMKDIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLADNHWELRDFTAKLV 289
+L +M ++ L++NP + ++PY+ L+P V+TCL+ ++LG + A H+ LRD ++ LV
Sbjct: 241 VLTQVMHMIEALIRNPTLYVDPYVAPLIPPVLTCLIGRQLGSSNDAVEHFALRDLSSSLV 300
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
I K+Y +TL+ RL +T L LDP + HYGA+ GL ++ GPNV+R L++PNL
Sbjct: 301 GMIAKKYSPSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIGGPNVIRELIIPNL 360
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWK 408
Y +L+ + E +++ EA +V G ++ LS++ S+
Sbjct: 361 PVYEVVLKDAVTDEG----LRKAEAEKVAGVIIAV--------------LSTIQDESLVH 402
Query: 409 TNG 411
TNG
Sbjct: 403 TNG 405
>gi|146419333|ref|XP_001485629.1| hypothetical protein PGUG_01300 [Meyerozyma guilliermondii ATCC
6260]
Length = 489
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 233/398 (58%), Gaps = 49/398 (12%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV +A+S+GI N +AA LA DVEYRI EI++ AIK MRHS+R TLTT+D+ A
Sbjct: 16 PHDTVGDVAESLGI-NLPEEAAKNLAMDVEYRIHEILETAIKFMRHSKRKTLTTEDISHA 74
Query: 65 LKLRNVEPVYGFASGGPLRFRR----AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
LK+ N+EP+YG+ + PL F+ A+G + L+Y+DD ++EF+ +I LP+ P +
Sbjct: 75 LKVFNIEPLYGYDNSQPLNFKETMVGALG-QTLYYIDDNEIEFEKLINQELPKVPRQATF 133
Query: 121 VCHWLAIEGVQPVIPENAPVQAI------------------------------AAPSNGT 150
HWLAIEGVQP+IP+N I A +NG+
Sbjct: 134 TAHWLAIEGVQPMIPQNPLPSEIKNLPPVLRGATTSILGNDILLYANGDGAKDAEAANGS 193
Query: 151 NNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLFKQALVSLATDSGLH 208
QK EIK VKH+LS+EL+LYFDK+ E+ VS L AL SL +D GLH
Sbjct: 194 TKAQKTEKNTEIKPLVKHVLSKELKLYFDKVLEVLVSSDPEKQELKDAALTSLKSDPGLH 253
Query: 209 PLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 268
LVPYF FVA++++ L N +LF ++ V+ L +N I +EPY+H LMP ++T L+AK
Sbjct: 254 QLVPYFIQFVAEQITNQLRNIDILFTMLEVISALAENSTIFLEPYVHALMPCILTLLLAK 313
Query: 269 RLGNRLAD-----------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD 317
++ + + N +R+F A L+ I K YG Y+TL+ R+T+TLL ALLD
Sbjct: 314 KISSAPKEQTEEEEKAALKNQLAVREFAAILLEHIVKVYGSSYSTLRPRVTRTLLRALLD 373
Query: 318 PKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLL 355
P + YGA+ GL +G V++ +L+ NL + +L+
Sbjct: 374 PSKPTGTQYGALLGLKNMGSEVIKFVLVGNLKVWYNLV 411
>gi|395852787|ref|XP_003798913.1| PREDICTED: transcription initiation factor TFIID subunit 6
[Otolemur garnettii]
Length = 677
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 234/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A P++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATPTDGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|226287176|gb|EEH42689.1| transcription initiation factor TFIID subunit 6 [Paracoccidioides
brasiliensis Pb18]
Length = 471
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 172/444 (38%), Positives = 258/444 (58%), Gaps = 31/444 (6%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E + +A+S+GI + + LA DVEYRI +++++A+K MRH++RT LTT D
Sbjct: 1 MSVWNPENIRDVAESVGIGTLNDEVVDNLARDVEYRISQVLEQALKFMRHAKRTVLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ ++EP+YG+ S PLRF A +G + LFY++D +V+F+ +I APLPR P +
Sbjct: 61 VSNALRVLDIEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
+ HWLA+EGVQP IP+N A + + S G N N + V +K VKHIL
Sbjct: 121 TFTAHWLAVEGVQPTIPQNPTSADSRNLELVSKGPNANANLAAMSGNDNVSVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + + A SL D GLH LVPYF F++++V+ L +
Sbjct: 181 SKELQLYFEKVCNAFLDELNEEYRLSAFSSLKEDPGLHQLVPYFVQFISEKVTHSLKDLF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD--NHWELRDFTAKL 288
+L +M + L+QN + ++PY+ L+P V+TCL+ ++LG+ AD H+ LRD +A L
Sbjct: 241 VLTQIMHMTEALIQNKSLYVDPYVPSLIPPVLTCLIGRQLGSSTADPLEHFALRDLSASL 300
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP-NVVRLLLLPN 347
+ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL ++G +VVR L+LPN
Sbjct: 301 INMIARKYSHSSHTLRPRLARTFLKNFLDPGKPLGTHYGAIIGLQSIGGVDVVRELVLPN 360
Query: 348 LGPYLSLLEPEMLLE-----KQKNEVKRHEAWRVYGALLQAAGQCIYD-----RLKIFPP 397
L Y +L+ M E V+R EA +V G +L G + + RL I
Sbjct: 361 LRTYEVVLKDVMGDEGGVGGGVGGGVRRMEAEKVLGVILAVLGTLVEEEEQRRRLGI--- 417
Query: 398 LSSLPARSVWKTNGIVATLSNKRK 421
+ W NG+ S +RK
Sbjct: 418 -EGAEVGAGWLANGV----SEERK 436
>gi|295666910|ref|XP_002794005.1| transcription initiation factor TFIID subunit 6 [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226277658|gb|EEH33224.1| transcription initiation factor TFIID subunit 6 [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 467
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/402 (40%), Positives = 243/402 (60%), Gaps = 14/402 (3%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E + +A+S+GI + + LA DVEYRI ++++EA+K MRH++RT LTT D
Sbjct: 1 MSVWNPENIRDVAESVGIGTLNDEVVDNLARDVEYRISQVLEEALKFMRHAKRTVLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ ++EP+YG+ S PLRF A +G + LFY++D +V+F+ +I APLPR P +
Sbjct: 61 VSNALRVLDIEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
+ HWLA+EGVQP IP+N A + + S G N N + V +K VKHIL
Sbjct: 121 TFTAHWLAVEGVQPTIPQNPTSADSRNLELVSKGPNANANLAAMSGNDNVSVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + + A SL D GLH LVPYF F++++V+ L +
Sbjct: 181 SKELQLYFEKVCNAFLDELNEEYRLSAFSSLKEDPGLHQLVPYFVQFISEKVTHSLKDLF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD--NHWELRDFTAKL 288
+L +M + L+QN + ++PY+ L+P V+TCL+ ++LG+ AD H+ LRD +A L
Sbjct: 241 VLTQIMHMTEALIQNKSLYVDPYVPSLIPPVLTCLIGRQLGSSTADPLEHFALRDLSASL 300
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP-NVVRLLLLPN 347
+ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL ++G +VVR L+LPN
Sbjct: 301 INMIARKYSHSSHTLRPRLARTFLKNFLDPGKPLGTHYGAIIGLQSIGGVDVVRELVLPN 360
Query: 348 LGPYLSLLEPEMLLEKQKNEVKRH-EAWRVYGALLQAAGQCI 388
L Y +L+ M E R EA +V G +L G +
Sbjct: 361 LRTYEVVLKDAMGDEGGVGGGVRRMEAEKVLGVILAVLGTLV 402
>gi|149757698|ref|XP_001505099.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Equus caballus]
Length = 678
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 234/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A P++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSTKPGQEEDGPLKGKGQGATPADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|417412310|gb|JAA52545.1| Putative transcription initiation factor tfiid subunit taf6 also
component of histone acetyltransfer, partial [Desmodus
rotundus]
Length = 686
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 234/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 20 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 79
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 80 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 139
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A P++G
Sbjct: 140 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATPADGK 199
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 200 GKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 258
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 259 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 318
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 319 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 378
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 379 TTRYGSIAGLAELGHDVIKTLILPRL 404
>gi|410984414|ref|XP_003998523.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Felis
catus]
Length = 678
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 234/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AAP++
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPADSK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|347971557|ref|XP_313173.5| AGAP004254-PA [Anopheles gambiae str. PEST]
gi|333468721|gb|EAA08678.5| AGAP004254-PA [Anopheles gambiae str. PEST]
Length = 685
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/377 (41%), Positives = 233/377 (61%), Gaps = 27/377 (7%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++VIA+SIG+ + DAA LA DV Y++++I+Q+A+K M HS+R L+ DVD +LK
Sbjct: 16 ESIKVIAESIGVGSLPDDAAKELADDVSYKLKQIVQDAVKFMHHSKRMKLSIADVDHSLK 75
Query: 67 LRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
+RN+EP YGF + + FR A G R+L ++++K+V+ ++++ P+ PL+ S+ HWL
Sbjct: 76 VRNIEPQYGFVARDFIPFRFASGGGRELHFIEEKEVDLTEMVQGQTPKIPLEPSLRAHWL 135
Query: 126 AIEGVQPVIPENAP-----VQAI-----AAPSNGTNNEQKDGLP------------VEIK 163
A+EGVQP +PEN P VQA+ A + TN + G P V++K
Sbjct: 136 AVEGVQPTVPENPPPLSKDVQALDSVNPAHKLDKTNQKDTTGKPTINKHKLKNSETVQVK 195
Query: 164 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 223
+H LS E QLY+ +ITE V SD +AL SL++D GLH ++P F+A+ V
Sbjct: 196 QLAQHELSVEQQLYYKEITEACVG-SDEARRAEALTSLSSDPGLHEMLPRMCTFIAEGVK 254
Query: 224 RGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-DNHWE 280
+ NN +LL LMR+V LL NP + +E YLH+L+P V TC+V+++L R DNHW
Sbjct: 255 VNVVQNNLALLIYLMRMVRALLDNPALYLEKYLHELIPCVSTCIVSRQLCMRPELDNHWA 314
Query: 281 LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVV 340
LRDF A+L+A ICK + N LQTR+T+ AL + K L+ YGA+QGL+ LG V
Sbjct: 315 LRDFAARLMAQICKTFNTSTNNLQTRVTRLFSAALQNDKTPLSSMYGALQGLSELGTEVT 374
Query: 341 RLLLLPNLGPYLSLLEP 357
++ ++P L +EP
Sbjct: 375 KVFIIPRLKFISERVEP 391
>gi|444724247|gb|ELW64857.1| Transcription initiation factor TFIID subunit 6 [Tupaia chinensis]
Length = 678
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 234/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AAP++
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPADSK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|241651046|ref|XP_002411265.1| transcription initiation factor tfii-D, putative [Ixodes
scapularis]
gi|215503895|gb|EEC13389.1| transcription initiation factor tfii-D, putative [Ixodes
scapularis]
Length = 630
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 245/412 (59%), Gaps = 37/412 (8%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++VIA+SIGISN +AA LA ++ YR++ Q+A K M H++R L+T D D ALK
Sbjct: 15 ESMKVIAESIGISNLPDEAAKELADEITYRLKVTAQDASKFMGHAKRRRLSTADFDNALK 74
Query: 67 LRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
++NVEP+YGF + FR A G R+LF++++K++E DVI + LP+ PLD SI HWL
Sbjct: 75 MKNVEPLYGFHCPDYVPFRYASGGGRELFFVEEKELELNDVISSQLPKLPLDVSIKAHWL 134
Query: 126 AIEGVQPVIPENAP--------VQAIAAPSNGTN------NEQKDGLP-----------V 160
+IEG+QP +PEN P V++I P N + + GLP V
Sbjct: 135 SIEGIQPTVPENPPPVSKDLQRVESID-PVTKLNKAVLPGSTKVPGLPTKQERTKHVETV 193
Query: 161 EIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD 220
++K H LS E QLY+ +ITE V DS +AL SLA+D GLH ++P F+++
Sbjct: 194 KVKQLATHELSVEQQLYYKEITEACVGSDDS-RRAEALQSLASDPGLHQMLPRLCTFISE 252
Query: 221 EVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-ADN 277
V + NN + L L+R+V LL N + +E YLH+L+PSV TC+V+++L R DN
Sbjct: 253 GVKVNVVQNNLAFLIYLIRMVKALLDNQTLYLEKYLHELIPSVATCIVSRQLCTRPDVDN 312
Query: 278 HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP 337
HW LRDF ++L+A ICK + N +QTR+T+ AL + K L HYGAV GLA LGP
Sbjct: 313 HWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSRALQNDKMPLASHYGAVSGLAELGP 372
Query: 338 NVVRLLLLP---NLGPYL--SLLEPEML-LEKQKNEVKRHEAWRVYGALLQA 383
VVR +LP LG L L EP ++K+ E + A RV +L+A
Sbjct: 373 EVVRSFVLPRIRQLGEKLRQGLEEPSTSPVDKKAAEHIKQLALRVVAPVLKA 424
>gi|148687262|gb|EDL19209.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_b [Mus musculus]
Length = 681
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 15 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 74
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 75 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 134
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AA ++G
Sbjct: 135 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGK 194
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 195 GKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 253
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 254 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 313
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 314 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 373
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 374 TTRYGSIAGLAELGHDVIKTLILPRL 399
>gi|453083775|gb|EMF11820.1| transcription initiation factor TFIID complex 60 kDa subunit
[Mycosphaerella populorum SO2202]
Length = 452
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 239/393 (60%), Gaps = 24/393 (6%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V +A+S+GI+ + + A LA DVEYRI ++++EA+K MRH++RTTLTT D+ +AL+
Sbjct: 8 ENVTDVAESVGIAALNREVAEHLARDVEYRISQVLEEALKFMRHAKRTTLTTQDISQALR 67
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLRF A IG + LFY++D++V+F+ +I APLP+ P + S HW
Sbjct: 68 VLDVEPLYGYESTRPLRFGEASIGPGQPLFYVEDEEVDFEKLINAPLPKVPREISFTGHW 127
Query: 125 LAIEGVQPVIPENAPVQA------IAAPSNGTNN----EQKDGLPVEIKLPVKHILSREL 174
LA+EGVQP IP+N P QA +A G N D V +K VKH+LS+EL
Sbjct: 128 LAVEGVQPSIPQN-PTQADQRGQELAGKGQGANTLAALSGNDN--VAVKPLVKHVLSKEL 184
Query: 175 QLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFA 234
QLYF++I + + A SL +D GLH LVPYF F+AD+V+ GL + +L
Sbjct: 185 QLYFERICAAILDEDNMEYQTAAFASLRSDPGLHQLVPYFIQFIADKVTHGLKSLFILAQ 244
Query: 235 LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD---NHWELRDFTAKLVAA 291
MR+V +LL N + I PY+ L+P+++TC+V K LG D H+ LR F++ L+
Sbjct: 245 SMRMVESLLANASLYIAPYVSALIPAILTCVVGKHLGAASKDQGEGHYALRAFSSSLLLR 304
Query: 292 ICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNLGP 350
I ++YG +TL+ R+ + L LD + HYGAV GL + G VR L+LPNL
Sbjct: 305 IAQKYGDSSSTLKPRIARACLKHFLDSHKPYGTHYGAVLGLTVIAGSAGVRSLILPNLQA 364
Query: 351 YLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
Y L+ E K++ KR A +V A++ A
Sbjct: 365 YDLHLQ-----EGLKDDAKRPHALKVVEAVVSA 392
>gi|112984254|ref|NP_001037690.1| transcription initiation factor TFIID subunit 6 [Rattus norvegicus]
gi|71679743|gb|AAI00109.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Rattus norvegicus]
Length = 647
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AA ++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|378727733|gb|EHY54192.1| transcription initiation factor TFIID subunit D5 [Exophiala
dermatitidis NIH/UT8656]
Length = 451
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/408 (38%), Positives = 245/408 (60%), Gaps = 18/408 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M++ ++TV+ +A+S+GI + + + + AL D+EYRI ++QEA+K M+HS+RT L T D
Sbjct: 1 MTLWGQDTVKDVAESVGILHLNKEVSHALCRDIEYRISLVLQEALKFMKHSKRTILWTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ AL+L +VEP+YG+ + PL++ A +G + LFY++D++++F+ +I APLP+ P +
Sbjct: 61 IAHALRLLDVEPLYGYETTRPLKYGEASLGPGQPLFYVEDEEMDFEKLINAPLPKVPREV 120
Query: 119 SIVCHWLAIEGVQPVIPENAPVQAIA-----APSNGTNNEQKDGL----PVEIKLPVKHI 169
S HWLA+EGVQP IP+N P A P N + K VKHI
Sbjct: 121 SFTAHWLAVEGVQPSIPQN-PTSNEARNLELVPKGPNANPALAAMTGADSTTTKPQVKHI 179
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 229
LS+ELQLYF+K+ + + L SL D GLH LVPYF FVA++V+ L +
Sbjct: 180 LSKELQLYFEKVCSSVLDETQPEYRTAGLASLRDDPGLHQLVPYFVQFVAEKVTHNLKDL 239
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD-NHWELRDFTAKL 288
+L +M ++ L +N + + PY+ L+P V+TCL + LG+ + +H++LRD A L
Sbjct: 240 FVLTQMMLLIDALTRNDKLNLTPYVASLVPPVLTCLTGRSLGSGIGSLDHYDLRDLAASL 299
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPN 347
+ +C++Y + L+ RL ++LL LDPK+ HYGA+ GL A+ GP VVR L++PN
Sbjct: 300 LGHLCRKYSKYSHNLKPRLARSLLKTFLDPKKPAGSHYGAILGLKAIGGPEVVRQLIVPN 359
Query: 348 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIF 395
L + LLE ++ Q VK+ EA +V A+ A G + D + +
Sbjct: 360 LKAFTELLEDDL----QDQGVKKAEAEKVVSAIFNALGTLVDDEIPLL 403
>gi|1912080|dbj|BAA18922.1| TFIID subunit [Xenopus laevis]
Length = 618
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/381 (40%), Positives = 232/381 (60%), Gaps = 35/381 (9%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++VI++S+GIS S + LA +V +RI+E+ Q+A+K M +R LT D+
Sbjct: 10 TLLPSESMKVISESVGISQMSEETCQLLAQEVSFRIKEVTQDALKFMHVGKRQKLTPSDI 69
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF L FR A G R+L + ++K+ + D+I PLPR PLD S+
Sbjct: 70 DAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETDLSDIISTPLPRVPLDVSL 129
Query: 121 VCHWLAIEGVQPVIPENAP--------VQA-----IAAPSN-------------GTNNEQ 154
HWL+IEGVQP IPEN P +A +A P G E+
Sbjct: 130 KAHWLSIEGVQPAIPENPPPVPKEQQKTEATEPLKVAKPGQEEGLPGKGQGSGEGKGKEK 189
Query: 155 K----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 210
K G P+++K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ +
Sbjct: 190 KTAILKGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEAK-RAEALQSIATDPGLYQM 248
Query: 211 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 268
+P F+ F+++ V + NN +LL LMR+V L+ NP + +E YLH+L+P+V+TC+V++
Sbjct: 249 LPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVMTCIVSR 308
Query: 269 RLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 327
+L R DNHW LRDF A+L+A ICK + N +Q+R+TKT +D + T YG
Sbjct: 309 QLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTKTWVDDRTPWTTRYG 368
Query: 328 AVQGLAALGPNVVRLLLLPNL 348
++ GLA LG +VV+ L++P L
Sbjct: 369 SIAGLAELGADVVKTLIVPRL 389
>gi|3024673|sp|Q63801.1|TAF6_RAT RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=Transcription initiation factor TFIID 70
kDa subunit; Short=TAF(II)70; Short=TAFII70; AltName:
Full=Transcription initiation factor TFIID 80 kDa
subunit; Short=TAF(II)80; Short=TAFII-80; Short=TAFII80;
AltName: Full=p80
gi|1109650|dbj|BAA08435.1| TFIID subunit p80 [Rattus sp.]
gi|149028526|gb|EDL83898.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Rattus norvegicus]
gi|149028527|gb|EDL83899.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Rattus norvegicus]
gi|149028528|gb|EDL83900.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Rattus norvegicus]
Length = 678
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AA ++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|6678215|ref|NP_033341.1| transcription initiation factor TFIID subunit 6 [Mus musculus]
gi|3024691|sp|Q62311.1|TAF6_MOUSE RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=Transcription initiation factor TFIID 70
kDa subunit; Short=TAF(II)70; Short=TAFII-70;
Short=TAFII70; AltName: Full=Transcription initiation
factor TFIID 80 kDa subunit; Short=TAF(II)80;
Short=TAFII-80; Short=TAFII80; AltName: Full=p80
gi|1372971|dbj|BAA08417.1| TFIID subunit p80 [Mus musculus]
gi|35193204|gb|AAH58583.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
gi|148687260|gb|EDL19207.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Mus musculus]
gi|148687261|gb|EDL19208.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Mus musculus]
Length = 678
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AA ++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|395533665|ref|XP_003768875.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Sarcophilus harrisii]
Length = 678
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/387 (39%), Positives = 234/387 (60%), Gaps = 42/387 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQMPEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP-------------------------------VQAIAAPSNG 149
HWL+IEG QP IPEN P Q +A+ ++G
Sbjct: 132 KAHWLSIEGFQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGVAS-TDG 190
Query: 150 TNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATD 204
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 191 KGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATD 249
Query: 205 SGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVV 262
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+
Sbjct: 250 PGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVM 309
Query: 263 TCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 321
TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 310 TCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTP 369
Query: 322 LTQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 370 WTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|334323236|ref|XP_001372137.2| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Monodelphis domestica]
Length = 767
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 234/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 100 TVLPSESMKVVAESMGIAQMPEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 159
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 160 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 219
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AA ++G
Sbjct: 220 KAHWLSIEGFQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAATADGK 279
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 280 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 338
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 339 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 398
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 399 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 458
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 459 TTRYGSIAGLAELGHDVIKTLILPRL 484
>gi|332866939|ref|XP_003318659.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Pan troglodytes]
gi|397489548|ref|XP_003815787.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
3 [Pan paniscus]
Length = 714
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 49 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 108
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 109 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 168
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A ++G
Sbjct: 169 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGK 228
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 229 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAK-RAEALQSIATDP 287
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 288 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 347
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 348 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 407
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 408 TTRYGSIAGLAELGHDVIKTLILPRL 433
>gi|225683556|gb|EEH21840.1| TATA-binding protein-associated-factor [Paracoccidioides
brasiliensis Pb03]
Length = 467
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/402 (40%), Positives = 243/402 (60%), Gaps = 14/402 (3%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E + +A+S+GI + + LA DVEYRI +++++A+K MRH++RT LTT D
Sbjct: 1 MSVWNPENIRDVAESVGIGTLNDEVVDNLARDVEYRISQVLEQALKFMRHAKRTVLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ ++EP+YG+ S PLRF A +G + LFY++D +V+F+ +I APLPR P +
Sbjct: 61 VSNALRVLDIEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
+ HWLA+EGVQP IP+N A + + S G N N + V +K VKHIL
Sbjct: 121 TFTAHWLAVEGVQPTIPQNPTSADSRNLELVSKGPNANANLAAMSGNDNVSVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + + A SL D GLH LVPYF F++++V+ L +
Sbjct: 181 SKELQLYFEKVCNAFLDELNEEYRLSAFSSLKEDPGLHQLVPYFVQFISEKVTHSLKDLF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD--NHWELRDFTAKL 288
+L +M + L+QN + ++PY+ L+P V+TCL+ ++LG+ AD H+ LRD +A L
Sbjct: 241 VLTQIMHMTEALIQNKSLYVDPYVPSLIPPVLTCLIGRQLGSSTADPLEHFALRDLSASL 300
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP-NVVRLLLLPN 347
+ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL ++G +VVR L+LPN
Sbjct: 301 INMIARKYSHSSHTLRPRLARTFLKNFLDPGKPLGTHYGAIIGLQSIGGVDVVRELVLPN 360
Query: 348 LGPYLSLLEPEMLLEKQKNEVKRH-EAWRVYGALLQAAGQCI 388
L Y +L+ M E R EA +V G +L G +
Sbjct: 361 LRTYEVVLKDVMGDEGGVGGGVRRMEAEKVLGVILAVLGTLV 402
>gi|193695219|ref|XP_001947762.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Acyrthosiphon pisum]
Length = 526
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 225/374 (60%), Gaps = 28/374 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S +P E+++VIA+S+GI N S DAA ++ YR++ ++QE+ K M HS R L D+
Sbjct: 10 STLPTESLKVIAESVGIGNLSDDAAKEISDSATYRLKLVLQESKKFMMHSNRCKLLPSDI 69
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALK+ +EP+YGF + + FR A G R+L ++DDKD++ + + APL + PL+ SI
Sbjct: 70 DNALKVFGIEPIYGFHAKDHIPFRYASGGGRELHFIDDKDIDLIEFVNAPLAKLPLEISI 129
Query: 121 VCHWLAIEGVQPVIPENAP-----VQAIAA------------------PSNGTNNEQKDG 157
CHWLAI+GVQP +PEN P VQ + PS G + ++
Sbjct: 130 RCHWLAIDGVQPTVPENPPSVSKDVQKLECVDPLNKLKKPIDKEVSGRPSTGKAQKLRNV 189
Query: 158 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
V +K H LS E QLY+ +ITE V SD +AL SLA+D GLH ++P F
Sbjct: 190 ETVHVKQLATHELSVEQQLYYKEITEACVG-SDESRRAEALQSLASDPGLHEMLPRMCTF 248
Query: 218 VADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-L 274
+A+ V + NN +LL LMR+V LL NP + +E YLH+++PSVVTC+V+K+L R
Sbjct: 249 IAEGVKVNVVQNNLALLIYLMRMVKALLDNPALYLEKYLHEIIPSVVTCVVSKQLCMRPE 308
Query: 275 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
DNHW LRDF ++L+A ICK + N +QTR+T+ NA K AL YGA++GLA
Sbjct: 309 IDNHWALRDFASRLMAQICKMFNTPTNNVQTRITRVFTNATNSDKTALPSVYGALEGLAE 368
Query: 335 LGPNVVRLLLLPNL 348
LG +++ ++P +
Sbjct: 369 LGTETIKVFVIPRV 382
>gi|298676520|ref|NP_001177344.1| transcription initiation factor TFIID subunit 6 isoform epsilon
[Homo sapiens]
gi|194390122|dbj|BAG61823.1| unnamed protein product [Homo sapiens]
Length = 714
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 49 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 108
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 109 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 168
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A ++G
Sbjct: 169 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGK 228
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 229 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAK-RAEALQSIATDP 287
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 288 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 347
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 348 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 407
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 408 TTRYGSIAGLAELGHDVIKTLILPRL 433
>gi|332866935|ref|XP_003339456.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
5 [Pan troglodytes]
gi|332866937|ref|XP_001139475.2| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Pan troglodytes]
gi|332866941|ref|XP_003318660.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
3 [Pan troglodytes]
gi|397489544|ref|XP_003815785.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Pan paniscus]
gi|397489546|ref|XP_003815786.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Pan paniscus]
gi|397489550|ref|XP_003815788.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
4 [Pan paniscus]
Length = 677
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A ++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|169776525|ref|XP_001822729.1| transcription initiation factor TFIID complex subunit [Aspergillus
oryzae RIB40]
gi|83771464|dbj|BAE61596.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391873896|gb|EIT82896.1| transcription initiation factor TFIID, subunit TAF6 [Aspergillus
oryzae 3.042]
Length = 445
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/397 (40%), Positives = 238/397 (59%), Gaps = 16/397 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI N + D LA DVEYRI ++++EA+K MRHSRRT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGIVNLNNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ +AL++ +VEP+YG+ S PLRF A +G + LFY++D++V+F+ +I APLP+ P +
Sbjct: 61 IAQALRVLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNEQ-----KDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N A + + S G N V +K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPTSADSRNLELMSKGPNANSTLAAMSGSGNVAVKPLVKHVL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + S A SL D GLH LVPYF F++++V+ GL +
Sbjct: 181 SKELQLYFEKVCNAFLDESSEEYRTSAYSSLREDPGLHQLVPYFVQFISEKVTHGLKDIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLV 289
+L +MR+ L+QN + ++PY+ L+P ++T L+ ++L GN + LR+ A L+
Sbjct: 241 VLTQVMRMAEALVQNKSLYVDPYVASLVPPILTSLIGRQLGGNADLSEQFALRELAASLL 300
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
I K+Y H +TL+ RL ++ L LDP + HYGA+ GL A+ G VR+L+LPNL
Sbjct: 301 GLIAKKYSHSSHTLKPRLARSCLKTFLDPSKPFGAHYGAIIGLQAVGGAEAVRVLILPNL 360
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAG 385
Y +LL+ M E +R EA +V L G
Sbjct: 361 PTYGALLKDGMAEENP----RRPEAEKVLTVLFGVLG 393
>gi|5032147|ref|NP_005632.1| transcription initiation factor TFIID subunit 6 isoform alpha [Homo
sapiens]
gi|21536359|ref|NP_647476.1| transcription initiation factor TFIID subunit 6 isoform alpha [Homo
sapiens]
gi|1729810|sp|P49848.1|TAF6_HUMAN RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=RNA polymerase II TBP-associated factor
subunit E; AltName: Full=Transcription initiation factor
TFIID 70 kDa subunit; Short=TAF(II)70; Short=TAFII-70;
Short=TAFII70; AltName: Full=Transcription initiation
factor TFIID 80 kDa subunit; Short=TAF(II)80;
Short=TAFII-80; Short=TAFII80
gi|437385|gb|AAA63643.1| TAFII70 [Homo sapiens]
gi|1136306|gb|AAA84390.1| TAFII80 [Homo sapiens]
gi|17390254|gb|AAH18115.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
gi|23266704|gb|AAN10295.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
gi|51094599|gb|EAL23851.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
gi|119596995|gb|EAW76589.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_b [Homo sapiens]
gi|119596997|gb|EAW76591.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_b [Homo sapiens]
gi|119596998|gb|EAW76592.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_b [Homo sapiens]
gi|123981418|gb|ABM82538.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [synthetic construct]
gi|123996257|gb|ABM85730.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [synthetic construct]
gi|261860128|dbj|BAI46586.1| Transcription initiation factor TFIID subunit 6 [synthetic
construct]
Length = 677
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A ++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|402862990|ref|XP_003895820.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Papio anubis]
gi|402862992|ref|XP_003895821.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Papio anubis]
gi|402862998|ref|XP_003895824.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
5 [Papio anubis]
gi|355560492|gb|EHH17178.1| hypothetical protein EGK_13513 [Macaca mulatta]
gi|355747541|gb|EHH52038.1| hypothetical protein EGM_12403 [Macaca fascicularis]
Length = 678
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A ++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATAADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|51094600|gb|EAL23852.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
Length = 667
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A ++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|115433052|ref|XP_001216663.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189515|gb|EAU31215.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 445
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/436 (38%), Positives = 252/436 (57%), Gaps = 30/436 (6%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI N + D LA DVEYRI ++++EA+K MRHSRRT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGIVNLNNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ +AL++ +VEP+YG+ + PLRF A +G + LFY++D++V+F+ +I APLP+ P +
Sbjct: 61 ISQALRVLDVEPLYGYETTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNEQ-----KDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N A + + S G N V +K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPTAADSRNLELLSKGPNANSTLAAMSGSANVAVKPLVKHVL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + S A SL D GLH LVPYF F++++V+ G+ +
Sbjct: 181 SKELQLYFEKVCNAFLDESSEEYRTSAYSSLREDPGLHQLVPYFVQFISEKVTHGMKDIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLV 289
+L +MR+ L+QN + ++PY+ L+P ++TCL+ ++L GN + LRD A L+
Sbjct: 241 VLTQVMRMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGNADLSEQFALRDLAASLL 300
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
I K+Y H +TL+ RL ++ L LDP + YGA+ GL A+ G VR+L++PNL
Sbjct: 301 GLIAKKYSHSSHTLKPRLARSCLKTFLDPLKPFGAQYGAIIGLHAVGGAEAVRVLIVPNL 360
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWK 408
Y +LL+ M + + +R EA RV L F L+SL
Sbjct: 361 PTYGNLLKDGM----GEEDPRRPEAERVLKVL--------------FAVLASLREGRAPL 402
Query: 409 TNGIVATLSNKRKTSM 424
NG T+++ +T +
Sbjct: 403 ANGDAGTVTDDLRTRL 418
>gi|348568860|ref|XP_003470216.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cavia porcellus]
Length = 707
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 41 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 100
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 101 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 160
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A P++G
Sbjct: 161 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATPADGK 220
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G + +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 221 GKEKKAPPLLEGASLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 279
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 280 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 339
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 340 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 399
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 400 TTRYGSIAGLAELGHDVIKTLILPRL 425
>gi|402862994|ref|XP_003895822.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
3 [Papio anubis]
Length = 775
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 109 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 168
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 169 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 228
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A ++G
Sbjct: 229 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATAADGK 288
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 289 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 347
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 348 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 407
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 408 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 467
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 468 TTRYGSIAGLAELGHDVIKTLILPRL 493
>gi|119596994|gb|EAW76588.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_a [Homo sapiens]
Length = 667
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A ++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|402862996|ref|XP_003895823.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
4 [Papio anubis]
Length = 734
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 68 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 127
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 128 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 187
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A ++G
Sbjct: 188 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATAADGK 247
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 248 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 306
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 307 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 366
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 367 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 426
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 427 TTRYGSIAGLAELGHDVIKTLILPRL 452
>gi|242792547|ref|XP_002481976.1| transcription initiation factor TFIID complex 60 kDa subunit
[Talaromyces stipitatus ATCC 10500]
gi|218718564|gb|EED17984.1| transcription initiation factor TFIID complex 60 kDa subunit
[Talaromyces stipitatus ATCC 10500]
Length = 447
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 230/368 (62%), Gaps = 13/368 (3%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GISN S D LA DVEYRI ++++EA+K MRH RRT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGISNLSKDVTENLARDVEYRIAQVLEEALKFMRHGRRTVLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ AL++ NVEP+YG+ S PLRF A +G + LFY++D++V+F+ +I APLP+ P +
Sbjct: 61 ISHALRVLNVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREV 120
Query: 119 SIVCHWLAIEGVQPVIPENAP------VQAIA-APSNGTNNEQKDG-LPVEIKLPVKHIL 170
+ HWLA+EGVQP+IP+N ++ +A P+ N G +K VKHIL
Sbjct: 121 TFTAHWLAVEGVQPLIPQNPTSNDSRNLELVAKGPNTNPNLAALSGNQNTAVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + ++ A SL D GLH LVPYF F+A++V+ LNN
Sbjct: 181 SKELQLYFEKVCNAFLDQASEEYRTSAYSSLREDPGLHQLVPYFVQFIAEKVTHSLNNIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKL 288
+L +MR+ ++QN + I+PY+ L+P V+TCLV ++ G N + LRD A L
Sbjct: 241 VLTQVMRMAEAMIQNQSLYIDPYISALVPPVLTCLVGRQFGGSNNELSEQFALRDLAAAL 300
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPN 347
+ I K+Y H +TL+ R+ ++ L LDP + HYGA+ GL A+ G +VVR L+LPN
Sbjct: 301 LGMIAKKYSHASHTLKPRIARSCLKNFLDPAKPFGTHYGAIMGLHAIGGADVVRELILPN 360
Query: 348 LGPYLSLL 355
L PY LL
Sbjct: 361 LKPYEKLL 368
>gi|426357184|ref|XP_004045927.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Gorilla gorilla gorilla]
Length = 734
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 69 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 128
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 129 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 188
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A ++G
Sbjct: 189 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGK 248
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 249 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 307
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 308 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 367
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 368 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 427
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 428 TTRYGSIAGLAELGHDVIKTLILPRL 453
>gi|320168746|gb|EFW45645.1| transcription initiation factor TFIID complex 60 kDa subunit
[Capsaspora owczarzaki ATCC 30864]
Length = 541
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 168/435 (38%), Positives = 239/435 (54%), Gaps = 60/435 (13%)
Query: 29 LAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGF-ASGGPLRFRRA 87
L D E+R+R +++E++K M HSRR LTTDDV+ AL+ ++EP+YG+ AS PL R+
Sbjct: 25 LVKDTEFRLRMLVEESLKFMYHSRRHVLTTDDVNSALRAMDMEPLYGYGASAPPLVKRKN 84
Query: 88 IGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV------- 140
F +D++V+ ++ APLP+ S HWLAIEGVQP IP+N P+
Sbjct: 85 APNSGQF--EDEEVDLAALVAAPLPKVAPPVSYAAHWLAIEGVQPAIPQNPPMFGENRPM 142
Query: 141 ------------------------QAIAAPSNGTNNEQKDGLPV-----EIKLPVKHILS 171
+ AP + T P EIK V+H LS
Sbjct: 143 LNRTDKNLTVVNAQGKPTTAAVGAGSGVAPPSSTTPLVAGTFPAVRSLHEIKHLVEHTLS 202
Query: 172 RELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 231
+ELQ+Y++++ + +D+ + AL+SLA D GLH LVPY + F+AD++ + LNN +
Sbjct: 203 KELQIYYERLVDAITGVNDNA-RQAALISLAADPGLHQLVPYLSQFIADKILQNLNNLPM 261
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAA 291
L +M + L+ NP + +EPY+HQLMP+V+TC++ KRL R +NHW LR A++V+
Sbjct: 262 LMNIMLMTKALVSNPELHLEPYIHQLMPAVLTCVLGKRLCQRHTENHWALRVLAAQVVSI 321
Query: 292 ICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPY 351
IC+RY +N LQ R KTLL LDP + LT H+GAV GL LG + L+LPN Y
Sbjct: 322 ICRRYSSSHNQLQPRTAKTLLKVFLDPHKPLTSHFGAVVGLEHLGAETISALILPNFASY 381
Query: 352 LSLLE-------PEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDR------LKIFPPL 398
++LL PE +L R EA RV+GALL A G + R +F PL
Sbjct: 382 VALLALKRDPSIPENVL------TVREEAERVHGALLSAVGNLLKHRGVSSTPSGLFDPL 435
Query: 399 SSLPARSVWKTNGIV 413
+ L A V K +V
Sbjct: 436 TEL-APDVEKYYAVV 449
>gi|11991529|emb|CAC19673.1| TAFII70 protein [Pleurodeles waltl]
Length = 649
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 232/385 (60%), Gaps = 39/385 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
++ P E+++VIA+SIGIS + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TLFPTESMKVIAESIGISQVPEETCQLLTEEVSYRIKEITQDALKFMSVGKRQKLTTCDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D AL+L+NVEP+YGF + + FR A G R+L++ D+K+V+ D+I PLPR PLD +
Sbjct: 72 DSALRLKNVEPLYGFTANEFIPFRYASGGGRELYFYDEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPEN---APVQAIA---APSNGTNNEQKDGLPV-------------- 160
HWL+IEGVQP IPEN AP Q A P Q +G P+
Sbjct: 132 KAHWLSIEGVQPAIPENPPPAPKQQKAEATEPLKAVKPGQDEGSPLKGKGQSAITPDGKG 191
Query: 161 -EIKLPV------------KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGL 207
E K PV H LS E QLY+ +ITE V ++ +AL S+ATD GL
Sbjct: 192 KEKKPPVLKEGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGL 250
Query: 208 HPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCL 265
+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E YLH+L+P+V+TC+
Sbjct: 251 YQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVMTCI 310
Query: 266 VAKRLGNRL-ADNHWELRDFTAKLVAAICKRY-GHVYNTLQTRLTKTLLNALLDPKRALT 323
V+++L R DNHW LRDF A+L+A ICK + N +Q+R+TKT + +D K A T
Sbjct: 311 VSRQLCLRPDVDNHWALRDFAARLIAQICKNFNATTTNNIQSRITKTFTKSWVDDKTAWT 370
Query: 324 QHYGAVQGLAALGPNVVRLLLLPNL 348
YG++ GLA LG +VV+ L++P L
Sbjct: 371 TRYGSIAGLAELGHDVVKALIVPRL 395
>gi|50949874|emb|CAH10485.1| hypothetical protein [Homo sapiens]
Length = 677
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A ++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E++ +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKEAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|427789039|gb|JAA59971.1| Putative transcription initiation factor tfiid subunit taf6 also
component of histone acetyltransfer [Rhipicephalus
pulchellus]
Length = 636
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 171/410 (41%), Positives = 244/410 (59%), Gaps = 34/410 (8%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++VIA+SIGISN +AA LA ++ YR++ I Q+A K M H++R L+T D D ALK
Sbjct: 15 ESMKVIAESIGISNLPDEAAKELADEITYRLKVIAQDASKFMGHAKRRKLSTFDFDNALK 74
Query: 67 LRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
++NVEP+YGF + FR A G R+LF++++K++E +VI + LP+ PLD SI HWL
Sbjct: 75 MKNVEPLYGFHCPDYVPFRYASGGGRELFFVEEKELELNEVINSQLPKLPLDVSIKAHWL 134
Query: 126 AIEGVQPVIPENAP--------VQAIAAPSNGTN----NEQKDGLP-----------VEI 162
+IEG+QP +PEN P V++I + + + GLP V +
Sbjct: 135 SIEGIQPTVPENPPPVSKDLQRVESIDPVTKLSKVVVPGSKVPGLPSKQERTKHVETVRV 194
Query: 163 KLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEV 222
K H LS E QLY+ +ITE V DS +AL SLA+D GLH ++P F+++ V
Sbjct: 195 KQLATHELSVEQQLYYKEITEACVGSDDS-RRAEALQSLASDPGLHQMLPRLCTFISEGV 253
Query: 223 SRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHW 279
+ NN + L L+R+V LL N + +E YLH+L+PSV TC+V+++L R DNHW
Sbjct: 254 KVNVVQNNLAFLIYLIRMVKALLDNQTLYLEKYLHELIPSVATCIVSRQLCTRPDVDNHW 313
Query: 280 ELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNV 339
LRDF ++L+A ICK + N +QTR+T+ AL + K L HYGAV GLA LGP V
Sbjct: 314 ALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSRALQNDKMPLASHYGAVSGLAELGPEV 373
Query: 340 VRLLLLPN---LGPYL--SLLEPEML-LEKQKNEVKRHEAWRVYGALLQA 383
VR +LP LG L L EP + ++K+ E + RV +L+A
Sbjct: 374 VRSFVLPRVRALGEKLRQGLEEPGVSPVDKKAAEHIKQLLLRVLAPVLKA 423
>gi|403285894|ref|XP_003934245.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Saimiri boliviensis boliviensis]
gi|403285896|ref|XP_003934246.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Saimiri boliviensis boliviensis]
gi|403285898|ref|XP_003934247.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
3 [Saimiri boliviensis boliviensis]
Length = 678
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AA ++
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAATADSK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|390459096|ref|XP_002744053.2| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 6 [Callithrix jacchus]
Length = 731
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 65 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 124
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 125 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 184
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AA ++
Sbjct: 185 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADSK 244
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 245 GKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 303
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 304 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 363
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 364 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 423
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 424 TTRYGSIAGLAELGHDVIKTLILPRL 449
>gi|328768213|gb|EGF78260.1| hypothetical protein BATDEDRAFT_13395 [Batrachochytrium
dendrobatidis JAM81]
Length = 461
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/371 (42%), Positives = 228/371 (61%), Gaps = 24/371 (6%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ PKET+ IA+S+G+S + A L D EYR+REI+ EA+K MRHSRR LT+ D
Sbjct: 1 MSVFPKETILAIAESVGVS-MQDEVATVLLQDTEYRMREIIHEAVKFMRHSRRQKLTSAD 59
Query: 61 VDEALKLRNVEPVYGFASGGPLRFR-RAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 119
++ AL +RNVEP+YG+ +G P F+ ++G + L+YL+D++ + D+I PLP PL+ +
Sbjct: 60 INSALSVRNVEPLYGYINGAPSNFKMTSMGSQVLYYLEDQEYDLDDLINRPLPPVPLEAT 119
Query: 120 IVCHWLAIEGVQPVIPENAPVQAI---------------AAPSNGTNNEQKDGLPVEIKL 164
HWLA++G QP I +N I + G + + L
Sbjct: 120 YTAHWLAVDGAQPRIVQNPTPSGIYDYGQTTTETLQATTSTIRRGEKSLTSTSDTTQHPL 179
Query: 165 PVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSR 224
VK +L++ELQ+Y++KITE+ S D + A+ S++ D G+ ++PYF F++D V+R
Sbjct: 180 LVKEVLTKELQMYYEKITEMLTSE-DLEIRSLAIESISKDPGVQGIMPYFVQFISDTVTR 238
Query: 225 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-----GNRLAD-NH 278
L + LL+ +MR +L N + EPYLHQL+PS++TC+VAKR+ G D +H
Sbjct: 239 SLKDLELLWTIMRFTRGILSNVDLDPEPYLHQLIPSILTCIVAKRMTRNSSGETAGDEDH 298
Query: 279 WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPN 338
W LR ++AKL A IC ++G Y TLQ R+TKTLL A+LDP + L YGA+ LAALG
Sbjct: 299 WALRLYSAKLAAHICVQFGGAYPTLQPRVTKTLLRAMLDPLKPLATVYGALAALAALGKQ 358
Query: 339 VVRLLLLPNLG 349
VV L+LPN+
Sbjct: 359 VVCALVLPNVA 369
>gi|50423941|ref|XP_460555.1| DEHA2F04356p [Debaryomyces hansenii CBS767]
gi|49656224|emb|CAG88873.1| DEHA2F04356p [Debaryomyces hansenii CBS767]
Length = 494
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 234/401 (58%), Gaps = 48/401 (11%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ A+S+GI N +AA LA DVEYRI EI++ AIK MRHS+R L T D++ A
Sbjct: 16 PHDTVKDAAESLGI-NLPEEAAKNLAMDVEYRIHEILETAIKFMRHSKRKLLMTSDINHA 74
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ N+EP+YG+ + PL F+ A+ G + L+Y+D+ ++EF+ +I LP P T+
Sbjct: 75 LKILNIEPLYGYDNSQPLSFKEALVGAGGQTLYYIDNHEIEFEKLINQELPSVPRQTTFT 134
Query: 122 CHWLAIEGVQPVIPEN-APVQAIAAP--------------------SN------------ 148
HWLAIEGVQP+IP+N P + + P SN
Sbjct: 135 AHWLAIEGVQPMIPQNPLPSEIKSLPPIIRGATSSILGNDILNSGFSNENSVKDAPNGAD 194
Query: 149 -GTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLFKQALVSLATDS 205
G N++ VE+K VKH+LS+EL+LYFDK+ E+ +S L A+ SL D
Sbjct: 195 AGAKNKKLTEKEVEVKPLVKHVLSKELKLYFDKVVEVLISTDPEKESLKYAAINSLKNDP 254
Query: 206 GLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCL 265
GLH LVPYF FVA++++ L N +L ++ V+ L N I ++PY+H LMP ++T L
Sbjct: 255 GLHQLVPYFIQFVAEQITNQLRNIDILSTMLEVISALADNKTIFLDPYVHALMPCILTLL 314
Query: 266 VAKRLG--------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD 317
+AKR+G N + N +R+F A L+ I K YG Y+TL+ R+T+TLL ALLD
Sbjct: 315 LAKRIGPIIKDNSSNEVLKNQLAVREFAAILLEHIIKVYGSSYSTLKPRVTRTLLRALLD 374
Query: 318 PKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ + HYGA+ GL +G VV+L+L+ NL + L+ E
Sbjct: 375 SSKPIGTHYGALLGLKNMGNEVVKLVLIGNLKMWCKLVVDE 415
>gi|260947084|ref|XP_002617839.1| hypothetical protein CLUG_01298 [Clavispora lusitaniae ATCC 42720]
gi|238847711|gb|EEQ37175.1| hypothetical protein CLUG_01298 [Clavispora lusitaniae ATCC 42720]
Length = 497
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 229/393 (58%), Gaps = 50/393 (12%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ +A+ +GI N DAA LA DVEYRI EI++ AIK MRHS+R LTT D++ A
Sbjct: 16 PHDTVKDVAELLGI-NLPEDAAKNLAMDVEYRIHEILETAIKFMRHSKRKMLTTGDINHA 74
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ N+EP+YG+ PL F+ A+ + L+Y+DD +VEF+ +I LP+ P T+
Sbjct: 75 LKVLNIEPLYGYDQSQPLVFKEALFGASGQTLYYIDDNEVEFEKLINQELPKVPRQTTFT 134
Query: 122 CHWLAIEGVQPVIPE--------NAPVQAIAAPSNGTNNE-------------------- 153
HWLAIEGVQP+IP+ N P A S+ NN+
Sbjct: 135 AHWLAIEGVQPMIPQNPLASEIKNLPAIVRGATSSVLNNDLLNNSSTTSTVAGEDSKEQG 194
Query: 154 QKDGLP----VEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLFKQALVSLATDSGL 207
QK VE+K VKH+LS+EL+LYFDK+ E+ +S L + AL SL TD GL
Sbjct: 195 QKKKAAGDKDVEVKPLVKHVLSKELKLYFDKVVEVLISTDAEKESLREAALSSLRTDPGL 254
Query: 208 HPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVA 267
H LVPYF FVA++++ L N +L ++ V+ L N I + PY+H LMP ++T L+A
Sbjct: 255 HQLVPYFIQFVAEQITNQLRNIDVLITMLDVISALYDNKTIFLAPYVHALMPCILTLLLA 314
Query: 268 KRLGNRLADN------------HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 315
KR+G + +N + +R+F + L+ + YG Y+TL R+T+TLL AL
Sbjct: 315 KRIGPPIKENSDDAAITNLLKGQFAVREFASLLLEHVINSYGSSYSTLTPRVTRTLLRAL 374
Query: 316 LDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
LD + + HYGA+ GL LG V++L+L+ NL
Sbjct: 375 LDSSKPIGTHYGALLGLEKLGSEVIKLVLVGNL 407
>gi|344301463|gb|EGW31775.1| hypothetical protein SPAPADRAFT_62369 [Spathaspora passalidarum
NRRL Y-27907]
Length = 496
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 233/398 (58%), Gaps = 55/398 (13%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ A S+GI N +AA LA DVEYRI EI++ AIK MRHS+R L T D++ A
Sbjct: 14 PYDTVKDAADSLGI-NLPDEAAKNLAMDVEYRIHEILETAIKIMRHSKRKLLMTTDINHA 72
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ NVEP+YG+ + PL F+ + G + L+Y+DD+++EF+ +I LP+ P T+
Sbjct: 73 LKILNVEPLYGYDNSQPLSFKETLVGTGGQTLYYIDDQEIEFEKLINQELPKVPRQTTFT 132
Query: 122 CHWLAIEGVQPVIPEN-APVQAIAAP------------------SNGTNNEQKDGLP--- 159
HWLAIEGVQP++P+N P + + P + G + KD P
Sbjct: 133 AHWLAIEGVQPMVPQNPLPSEIKSLPPIIRGATSSILGNDILSFAGGAGVDGKDAQPGKD 192
Query: 160 ----------------VEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLFKQALVSL 201
+E+K VKH+LS+EL+LYFDK+ E+ +S L + AL SL
Sbjct: 193 KKDSASAAAAAATERELEVKPLVKHVLSKELKLYFDKVVEVLISSDPEKEPLRQAALSSL 252
Query: 202 ATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 261
+D GLH LVPYFT FV+ +++ L N +L ++ V+ L++N I + PY+H LMPS+
Sbjct: 253 RSDPGLHQLVPYFTQFVSAQITDQLRNIDILITMLEVISALVENKTIFLNPYVHALMPSI 312
Query: 262 VTCLVAKRLG-----------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKT 310
+T L+AKR+G L ++R F + L+ I + YG Y+TL+ R+T+T
Sbjct: 313 LTLLLAKRIGPVIKETTTKESQELLMRQLQVRTFASILLKHIIEVYGSSYSTLRPRVTRT 372
Query: 311 LLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
LL ALLD + + HYGA+ GL +GP V++L+L+ NL
Sbjct: 373 LLRALLDYSKPMETHYGALLGLKNMGPEVIKLVLIGNL 410
>gi|255952885|ref|XP_002567195.1| Pc21g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588906|emb|CAP95021.1| Pc21g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 442
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 238/394 (60%), Gaps = 19/394 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI N + D LA DVEYR+ ++++EA+KCMRH +RT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGILNLNNDVTENLARDVEYRVAQVLEEALKCMRHCKRTVLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ AL+ +VEP+YG+ S PL+F A +G + LFY++D++V+F+ +I APLP+ P +
Sbjct: 61 IALALRNLDVEPLYGYDSTRPLKFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREV 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
S HWLA+EGVQP IP+N A + + S G N N + V +K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPTAADSRNLELVSKGPNANSTLAAISGTGDVAVKPLVKHVL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
SRELQLYF+K+ + + SL D GLH LVPYF F+A++V+ L N
Sbjct: 181 SRELQLYFEKVCSAFLHETSEDYRTSGYSSLREDPGLHQLVPYFVQFIAEKVTHSLKNVF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD--NHWELRDFTAKL 288
+L +M + L+QN + ++PY+ L+PS++TCL+ ++LG AD + LRD A L
Sbjct: 241 VLTQVMHMAEALVQNQSLYVDPYIASLVPSILTCLIGRQLGGT-ADLVESFALRDMAASL 299
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPN-VVRLLLLPN 347
++ I K+Y H + L+ RL ++ L LDP + HYGAV GL ++G + V+R+L++PN
Sbjct: 300 LSLIAKKYSHSSHMLKPRLVRSCLKTFLDPSKPFGAHYGAVIGLQSVGGSEVIRVLVIPN 359
Query: 348 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 381
L Y LL + + +R A RV AL+
Sbjct: 360 LPEYTKLLSDGL-----DDAARRPAAERVLNALV 388
>gi|405971664|gb|EKC36489.1| Transcription initiation factor TFIID subunit 6 [Crassostrea gigas]
Length = 637
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 228/383 (59%), Gaps = 44/383 (11%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S +P E+++VIA+S+GIS DAA LA D YR+++I+QEA+K M H +R L+T D+
Sbjct: 13 SQLPGESIKVIAESVGISGIPDDAASVLAEDSSYRLKQIVQEAVKFMHHGKRHRLSTADI 72
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D AL+ +N+EP+YGF +G + FR A G R+L ++++K+ + ++++ + LP+ P+D ++
Sbjct: 73 DHALRAQNIEPLYGFQTGDSIPFRFASGGGRELHFVEEKEFDLQEIVNSTLPKIPIDIAL 132
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK------------- 167
HWL IEGVQP IPEN P P++ + +QK+ L +K ++
Sbjct: 133 KAHWLCIEGVQPSIPENPP------PAS-KDQQQKEILDTTVKTVIEKQPKVAPIPEPHK 185
Query: 168 -------------------HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLH 208
H LS E QLY+ +ITE V D +AL SLA+D GLH
Sbjct: 186 IKHKHKGITDLAKVKDLSNHELSVEQQLYYKEITEACVG-PDEARRSEALQSLASDPGLH 244
Query: 209 PLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLV 266
++P F+ F+++ V + NN +LL LMR+V +++ N + +E YLH+ +P+V TC+V
Sbjct: 245 QMLPRFSTFISEGVKINVVQNNLALLIYLMRMVKSIMDNQTLYLEKYLHEFIPAVCTCIV 304
Query: 267 AKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQH 325
+K+L R DNHW LRDF A+L+ +CK + N +Q R+TKT A+ K AL
Sbjct: 305 SKQLCMRPEVDNHWALRDFAARLMGQMCKNFSTSTNNIQARITKTFTQAIQSEKAALATQ 364
Query: 326 YGAVQGLAALGPNVVRLLLLPNL 348
YGA+ GL +G V++ LLP++
Sbjct: 365 YGAIAGLGEMGSEVIKSFLLPHV 387
>gi|351695509|gb|EHA98427.1| Transcription initiation factor TFIID subunit 6 [Heterocephalus
glaber]
Length = 677
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/385 (39%), Positives = 230/385 (59%), Gaps = 39/385 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQKDG---------LPVEIK 163
HWL+IEG QP IPEN P +A + +++DG P + K
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATPADSK 191
Query: 164 LPVK-----------------HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSG 206
K H LS E QLY+ +ITE V ++ +AL S+ATD G
Sbjct: 192 GKFKAPPLLEGASLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPG 250
Query: 207 LHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTC 264
L+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC
Sbjct: 251 LYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTC 310
Query: 265 LVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT 323
+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T
Sbjct: 311 IVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWT 370
Query: 324 QHYGAVQGLAALGPNVVRLLLLPNL 348
YG++ GLA LG +V++ L+LP L
Sbjct: 371 TRYGSIAGLAELGHDVIKTLILPRL 395
>gi|407926143|gb|EKG19113.1| TATA box binding protein associated factor (TAF) [Macrophomina
phaseolina MS6]
Length = 448
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 243/392 (61%), Gaps = 32/392 (8%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + ++ +A+S+GI++ + D A LA DVE+RI ++++EA+K MRHS+RTTL+T D
Sbjct: 1 MSVWNPDNIKDVAESVGIASLNDDVAEDLARDVEFRIGQVLEEALKFMRHSKRTTLSTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ +AL++ +VEP+YG+ S PLRF A +G + LFY++D++V+F+ +I APLP+ P +
Sbjct: 61 ISQALRVLDVEPLYGYESTRPLRFGEASMGPGQPLFYVEDEEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPENAPVQAIA----------------APSNGTNNEQKDGLPVEI 162
S HWLA+EGVQP I +N P A + A NG +N V +
Sbjct: 121 SFTAHWLALEGVQPAIAQN-PTSADSRHQDLLPKGPGANPYLAAVNGYDN-------VAV 172
Query: 163 KLPVKHILSRELQLYFDKITELAVSRSDSVLFK-QALVSLATDSGLHPLVPYFTYFVADE 221
K VKH++S+ELQLYFD+I A+ +D+ ++ QAL SL TD GLH LVPYF ++A++
Sbjct: 173 KPLVKHVISKELQLYFDRIVS-ALGDADNEEWRAQALGSLRTDPGLHQLVPYFVQYIAEK 231
Query: 222 VSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN---H 278
V+ + + +L +M + LL NP + ++ Y+ L+ V+TCL+ KRLG+ N H
Sbjct: 232 VTHNMKDLFILTQMMHMTSALLTNPSLYMDAYITGLVAPVLTCLMGKRLGSGSEGNPLAH 291
Query: 279 WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA-LGP 337
++LRD ++ I KRYG+ TL+ RL TL LD K+ HYGA+ GL +G
Sbjct: 292 FDLRDLAGTIIIEIAKRYGNSSQTLKKRLAATLCKNFLDDKKPCGTHYGAILGLQGIMGS 351
Query: 338 NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVK 369
+ V+ L+LPNL + ++L+ + E K E +
Sbjct: 352 DGVKFLILPNLKLFDAVLKERLADEATKAEAE 383
>gi|354496707|ref|XP_003510467.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cricetulus griseus]
gi|344248936|gb|EGW05040.1| Transcription initiation factor TFIID subunit 6 [Cricetulus
griseus]
Length = 678
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/386 (39%), Positives = 229/386 (59%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQKDG--------------- 157
HWL+IEG QP IPEN P +A + +++DG
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADAK 191
Query: 158 ------------LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
P +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|240277671|gb|EER41179.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces capsulatus H143]
Length = 470
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/411 (39%), Positives = 243/411 (59%), Gaps = 26/411 (6%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E + +A+S+GI S + LA DVEYRI ++++EA+K MRH++RT LTT D
Sbjct: 1 MSVWNPENIRDVAESVGIGALSDEVVDNLARDVEYRISQVLEEALKFMRHAKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+ +I APLPR P +
Sbjct: 61 VSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
+ HWLA+EGVQP IP+N A + + S G N N + V +K VKHIL
Sbjct: 121 TFTAHWLAVEGVQPTIPQNPAGADSRNLELVSKGPNANANLAAMSGNDNVTVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + + A SL D GLH LVPYF F++++V+ L +
Sbjct: 181 SKELQLYFEKVCTAFLDELNDEYRLSAFSSLKDDPGLHQLVPYFVQFISEKVTHSLKDLF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL--ADN--HWELRDFTA 286
+L +M + L+QN + ++PY+ L+P V+TCL+ ++LG AD+ H+ LRD A
Sbjct: 241 VLTQVMHMTEALIQNKTLYVDPYVPSLIPPVLTCLLGRQLGTSTGAADHLEHFALRDLAA 300
Query: 287 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP-NVVRLLLL 345
L++ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL ++G +VVR L++
Sbjct: 301 SLISMIARKYSHSSHTLRPRLARTFLRDFLDPGKPLGTHYGAIIGLQSIGGVDVVRELIV 360
Query: 346 PNLGPYLSLLEPEMLLEKQ-----------KNEVKRHEAWRVYGALLQAAG 385
PNL Y +L+ + V+R EA +V G +L G
Sbjct: 361 PNLKTYEIVLKDATATTTGAGAGASAGSGVEETVRRLEAEKVIGVILAVLG 411
>gi|154285430|ref|XP_001543510.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407151|gb|EDN02692.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 472
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 163/413 (39%), Positives = 243/413 (58%), Gaps = 28/413 (6%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E + +A+S+GI S + LA DVEYRI ++++EA+K MRH++RT LTT D
Sbjct: 1 MSVWNPENIRDVAESVGIGALSDEVVDNLARDVEYRISQVLEEALKFMRHAKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+ +I APLPR P +
Sbjct: 61 VSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
+ HWLA+EGVQP IP+N A + + S G N N + V +K VKHIL
Sbjct: 121 TFTAHWLAVEGVQPTIPQNPTGADSRNLELVSKGPNANANLAAMSGHDNVTVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + + A SL D GLH LVPYF F++++V+ L +
Sbjct: 181 SKELQLYFEKVCTAFLDELNDEYRLSAFSSLKDDPGLHQLVPYFVQFISEKVTHSLKDLF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL--ADN--HWELRDFTA 286
+L +M + L+QN + ++PY+ L+P V+TCL+ ++LG AD+ H+ LRD A
Sbjct: 241 VLTQVMHMTEALIQNKTLYVDPYVPSLIPPVLTCLLGRQLGTSTGAADHLEHFALRDLAA 300
Query: 287 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP-NVVRLLLL 345
L++ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL ++G +VVR L++
Sbjct: 301 SLISMIARKYSHSSHTLRPRLARTFLRDFLDPGKPLGTHYGAIIGLQSIGGVDVVRELIV 360
Query: 346 PNLGPYLSLLEPEMLLEKQ-------------KNEVKRHEAWRVYGALLQAAG 385
PNL Y +L+ + V+R EA +V G +L G
Sbjct: 361 PNLKTYEIVLKDATATTTGAGAGAGAGAGSGVEETVRRLEAEKVIGVILAVLG 413
>gi|170032690|ref|XP_001844213.1| transcription initiation factor TFIID subunit 6 [Culex
quinquefasciatus]
gi|167873043|gb|EDS36426.1| transcription initiation factor TFIID subunit 6 [Culex
quinquefasciatus]
Length = 614
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/369 (41%), Positives = 226/369 (61%), Gaps = 28/369 (7%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++VIA+SIG+ + DAA LA DV ++++I+Q+A K M HS+R ++ D+D +LK
Sbjct: 16 ESIKVIAESIGVGSLPDDAAKELADDVSIKLKQIVQDAAKFMHHSKRMKMSIADIDHSLK 75
Query: 67 LRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
+RN+EP YGF S + FR A G R+L ++++K+++ +VI+ P+ PLD ++ HWL
Sbjct: 76 VRNIEPQYGFVSPDFIPFRFASGGGRELHFIEEKEIDLAEVIQTAPPKIPLDITLRAHWL 135
Query: 126 AIEGVQPVIPENAP-----VQAI------------------AAPSNGTNNEQKDGLPVEI 162
++GVQP IPEN P VQA+ P+ G ++ K+ V +
Sbjct: 136 CVDGVQPTIPENPPPLSKDVQALDSVNPVNKLDKAHIKDTTGKPAIGKAHKLKNVETVHV 195
Query: 163 KLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEV 222
K H LS E QLY+ +ITE V SD +AL SLA D GLH ++P F+A+ V
Sbjct: 196 KQLATHELSVEQQLYYKEITEACVG-SDEARRAEALTSLACDPGLHEMLPRMCTFIAEGV 254
Query: 223 SRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-DNHW 279
+ NN +LL LMR+V LL NP + +E YLH+L+PSV TC+V+++L R DNHW
Sbjct: 255 KVNVVQNNLALLIYLMRMVRALLDNPALYLEKYLHELIPSVSTCIVSRQLCMRPELDNHW 314
Query: 280 ELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNV 339
LRDF A+L+A ICK + N LQTR+T+ AL + K L+ YGA++GL+ LG V
Sbjct: 315 ALRDFAARLMAQICKNFNTSTNNLQTRVTRLFSAALQNDKTPLSSLYGALEGLSELGTEV 374
Query: 340 VRLLLLPNL 348
+++ ++P L
Sbjct: 375 IKVFIIPRL 383
>gi|157114938|ref|XP_001652495.1| transcription initiation factor TFIID subunit 6 [Aedes aegypti]
gi|108877125|gb|EAT41350.1| AAEL006988-PA [Aedes aegypti]
Length = 619
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 229/368 (62%), Gaps = 27/368 (7%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++VIA+SIG+ + DAA LA DV +++++I+Q+A K M HS+R ++ D+D +LK
Sbjct: 16 ESIKVIAESIGVGSLPDDAAKELADDVSFKLKQIVQDAAKFMHHSKRMKMSIADIDHSLK 75
Query: 67 LRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
+RN+EP YGF S + FR A G R+L ++++K+++ DVI+ P+ PLD ++ HWL
Sbjct: 76 VRNIEPQYGFVSPDFIPFRFASGGGRELHFIEEKEIDLADVIQTAPPKIPLDITLRAHWL 135
Query: 126 AIEGVQPVIPENAP-----VQAIAA--PSNGTNNEQ-KD--GLP------------VEIK 163
++GVQP IPEN P +QA+ + P N + KD G P V +K
Sbjct: 136 CVDGVQPTIPENPPPLSKDLQALDSVNPVNKLDRAHLKDTTGKPAIKAQKLKNVETVHVK 195
Query: 164 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 223
H LS E QLY+ +ITE V SD +AL SLA D GLH ++P F+A+ V
Sbjct: 196 QLATHELSVEQQLYYKEITEACVG-SDEARRAEALQSLACDPGLHEMLPRMCTFIAEGVK 254
Query: 224 RGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-DNHWE 280
+ NN +LL LMR+V LL NP + +E YLH+L+PSV TC+V+++L R DNHW
Sbjct: 255 VNVVQNNLALLIYLMRMVRALLDNPALYLEKYLHELIPSVSTCIVSRQLCMRPELDNHWA 314
Query: 281 LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVV 340
LRDF A+L+A ICK + N LQTR+T+ +AL + K L+ YGA++GL+ LG V+
Sbjct: 315 LRDFAARLMAQICKNFNTSTNNLQTRVTRLFSSALQNDKTPLSSLYGALEGLSELGTEVI 374
Query: 341 RLLLLPNL 348
++ ++P L
Sbjct: 375 KVFIIPRL 382
>gi|325093755|gb|EGC47065.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces capsulatus H88]
Length = 629
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 163/411 (39%), Positives = 243/411 (59%), Gaps = 26/411 (6%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E + +A+S+GI S + LA DVEYRI ++++EA+K MRH++RT LTT D
Sbjct: 1 MSVWNPENIRDVAESVGIGALSDEVVDNLARDVEYRISQVLEEALKFMRHAKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+ +I APLPR P +
Sbjct: 61 VSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
+ HWLA+EGVQP IP+N A + + S G N N + V +K VKHIL
Sbjct: 121 TFTAHWLAVEGVQPTIPQNPAGADSRNLELVSKGPNANANLAAMSGNDNVTVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + + A SL D GLH LVPYF F++++V+ L +
Sbjct: 181 SKELQLYFEKVCTAFLDELNDEYRLSAFSSLKDDPGLHQLVPYFVQFISEKVTHSLKDLF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL--ADN--HWELRDFTA 286
+L +M + L+QN + ++PY+ L+P V+TCL+ ++LG AD+ H+ LRD A
Sbjct: 241 VLTQVMHMTEALIQNKTLYVDPYVPSLIPPVLTCLLGRQLGTSTGAADHLEHFALRDLAA 300
Query: 287 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP-NVVRLLLL 345
L++ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL ++G +VVR L++
Sbjct: 301 SLISMIARKYSHSSHTLRPRLARTFLRDFLDPGKPLGTHYGAIIGLQSIGGVDVVRELIV 360
Query: 346 PNLGPYLSLLEPEMLLEKQ-----------KNEVKRHEAWRVYGALLQAAG 385
PNL Y +L+ + V+R EA +V G +L G
Sbjct: 361 PNLKTYEIVLKDATATTTGAGAGASAGSGVEETVRRLEAEKVIGVILAVLG 411
>gi|194751481|ref|XP_001958055.1| GF23708 [Drosophila ananassae]
gi|190625337|gb|EDV40861.1| GF23708 [Drosophila ananassae]
Length = 619
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 226/381 (59%), Gaps = 28/381 (7%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++VIA+SIG+ + S DAA LA DV +++ I+Q+A+K M HS+R L+ D+D +LK
Sbjct: 24 ESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIIQDAVKFMHHSKRQKLSVRDIDMSLK 83
Query: 67 LRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
+RNVEP YGF + + FR A G R+L + +DK+++ ++ + + PLD ++ HW
Sbjct: 84 VRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLSEITSSNTVKIPLDITLRSHWF 143
Query: 126 AIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDGLPVEI 162
+EGVQP +PEN P A P+ G ++ K+ + +
Sbjct: 144 VVEGVQPTVPENPPPLSKDSQFLDSVNPVIKLDQGLNKDAAGKPTTGKMHKLKNVETIHV 203
Query: 163 KLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEV 222
K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F+A+ V
Sbjct: 204 KQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTFIAEGV 262
Query: 223 SRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHW 279
+ NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R DNHW
Sbjct: 263 KVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPELDNHW 322
Query: 280 ELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNV 339
LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GLA LG V
Sbjct: 323 ALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLAELGGEV 382
Query: 340 VRLLLLPNLGPYLSLLEPEML 360
+++ ++P L +EP +L
Sbjct: 383 IKVFIIPRLKFISERIEPHLL 403
>gi|344234314|gb|EGV66184.1| DUF1546-domain-containing protein [Candida tenuis ATCC 10573]
gi|344234315|gb|EGV66185.1| hypothetical protein CANTEDRAFT_112664 [Candida tenuis ATCC 10573]
Length = 490
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 152/388 (39%), Positives = 234/388 (60%), Gaps = 45/388 (11%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ A+S+GI N + ++A LA DVEYRI EI++ AIK MR S+R LTT D++ +
Sbjct: 16 PHDTVKDAAESLGI-NLTEESAKNLAMDVEYRIHEILETAIKFMRRSKRKLLTTGDINHS 74
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ N+EP+YG+ + PL+F+ A+ G + L+Y+DD+++E + +I LP+ P T+
Sbjct: 75 LKVLNIEPLYGYDNSQPLQFKEALVAAGGQTLYYIDDQEIELEKLINQELPKVPRQTTFT 134
Query: 122 CHWLAIEGVQPVIPEN-APVQAIAAP---------------------------SNGTNNE 153
HWLAIEGVQP+IP+N +P + + P S G+ N+
Sbjct: 135 AHWLAIEGVQPIIPQNPSPAEIKSLPPAIRGATSSILGNDILNAAGNTEKNIMSTGSKNK 194
Query: 154 QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLFKQALVSLATDSGLHPLV 211
+ E+K VKH+LS+EL+LYFDK+ ++ +S+ L AL SL D GLH LV
Sbjct: 195 KVTDKDTEVKPLVKHVLSKELKLYFDKVVDVLLSKDPEKEGLQNSALNSLKNDPGLHQLV 254
Query: 212 PYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG 271
PYF FVA++++ L + +L +++V+ L N I ++PY+H LMP ++T L+AK +G
Sbjct: 255 PYFIQFVAEQITNQLRDIDILTTMLQVISALADNRSIFLDPYVHALMPCILTLLLAKNIG 314
Query: 272 NRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 320
+ D + E +R+F A L+ I YG Y+TL+ R+T+TLL ALLD +
Sbjct: 315 PNVKDFNDENGKSALKRNLAVREFAAILLKHIIVVYGSSYSTLKARVTRTLLRALLDSSK 374
Query: 321 ALTQHYGAVQGLAALGPNVVRLLLLPNL 348
+ HYGA+ GL +G V++L+L+ NL
Sbjct: 375 PIGTHYGALLGLKNMGNEVIKLVLIGNL 402
>gi|242015350|ref|XP_002428322.1| transcription initiation factor TFIID subunit, putative [Pediculus
humanus corporis]
gi|212512918|gb|EEB15584.1| transcription initiation factor TFIID subunit, putative [Pediculus
humanus corporis]
Length = 542
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/370 (41%), Positives = 222/370 (60%), Gaps = 31/370 (8%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++V+A+SIGI+N DAA L+ DV ++++ I+Q+++K M H +R L T DVD ALK
Sbjct: 15 ESMKVVAESIGINNLPDDAAKELSDDVSFKLKMIIQDSVKLMHHGKREKLCTGDVDNALK 74
Query: 67 LRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
++N+EPVYGF + FR A G R+L ++++K+V+ ++ APLP+ PL+ S+ HWL
Sbjct: 75 MKNIEPVYGFFVPDHIPFRFASGGGRELHFIEEKEVDLNEITSAPLPKLPLEISLRAHWL 134
Query: 126 AIEGVQPVIPENAP-----------VQAIAAPSNGTNNEQKDGLP-------------VE 161
IEGVQP IPEN P V I S+ N + G P V
Sbjct: 135 VIEGVQPTIPENPPPISKEMQRLESVDPICKLSHNQNGKDIPGKPTTGKLQKLKNVETVH 194
Query: 162 IKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADE 221
+K H LS E QLY+ +ITE + SD +AL SLA D GLH ++P F+ +
Sbjct: 195 VKQLATHELSVEQQLYYKEITE---AWSDEGRRAEALQSLACDPGLHEMLPRMCTFITEG 251
Query: 222 VSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-DNH 278
V + NN +LL LMR+V LL N + +E YLH+L+PSV TC+V+K+L R DNH
Sbjct: 252 VKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELIPSVATCIVSKQLCMRPELDNH 311
Query: 279 WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPN 338
W LRDF ++L+A IC + N +Q+R+T+ AL K L+ YGA+QGL+ LG
Sbjct: 312 WALRDFASRLLAQICNNFNTSTNNVQSRITRLFSRALQGEKAPLSSLYGAIQGLSELGTE 371
Query: 339 VVRLLLLPNL 348
VV++L+LP +
Sbjct: 372 VVKVLILPKI 381
>gi|225557125|gb|EEH05412.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces capsulatus G186AR]
Length = 491
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/366 (42%), Positives = 228/366 (62%), Gaps = 15/366 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E + +A+S+GI S + LA DVEYRI ++++EA+K MRH++RT LTT D
Sbjct: 1 MSVWNPENIRDVAESVGIGALSDEVVDNLARDVEYRISQVLEEALKFMRHAKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+ +I APLPR P +
Sbjct: 61 VSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
+ HWLA+EGVQP IP+N A + + S G N N + V +K VKHIL
Sbjct: 121 TFTAHWLAVEGVQPTIPQNPAGADSRNLELVSKGPNANANLAAMSGNDNVTVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + + A SL D GLH LVPYF F++++V+ L +
Sbjct: 181 SKELQLYFEKVCTAFLDELNDEYRLSAFSSLKDDPGLHQLVPYFVQFISEKVTHSLKDLF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL--ADN--HWELRDFTA 286
+L +M + L+QN + ++PY+ L+P V+TCL+ ++LG AD+ H+ LRD A
Sbjct: 241 VLTQVMHMTEALIQNKTLYVDPYVPSLIPPVLTCLLGRQLGTSTGAADHLEHFALRDLAA 300
Query: 287 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP-NVVRLLLL 345
L++ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL ++G +VVR L++
Sbjct: 301 SLISMIARKYSHSSHTLRPRLARTFLRDFLDPGKPLGTHYGAIIGLQSIGGVDVVRELIV 360
Query: 346 PNLGPY 351
PNL Y
Sbjct: 361 PNLKTY 366
>gi|425774639|gb|EKV12941.1| Transcription initiation factor TFIID complex 60 kDa subunit
[Penicillium digitatum Pd1]
gi|425776498|gb|EKV14715.1| Transcription initiation factor TFIID complex 60 kDa subunit
[Penicillium digitatum PHI26]
Length = 442
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 237/394 (60%), Gaps = 19/394 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI N + D LA DVEYR+ ++++EA+K MRH +RT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGILNLNNDVTENLARDVEYRVAQVLEEALKSMRHCKRTVLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ AL+ +VEP+YG+ S PL+F A +G + LFY++D++V+F+ +I APLP+ P +
Sbjct: 61 IALALRNLDVEPLYGYDSTRPLKFGEASLGPGQPLFYVEDEEVDFEKLINAPLPKVPREV 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
S HWLA+EGVQP IP+N A + + S G N N + V +K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPTAADSRNLELVSKGPNANSTLAAISGTGDVAVKPLVKHVL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
SRELQLYF+K+ + + SL D GLH LVPYF F+A++V+ L N
Sbjct: 181 SRELQLYFEKVCSAFLHETSEDYRTSGYSSLREDPGLHQLVPYFVQFIAEKVTHSLKNVF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD--NHWELRDFTAKL 288
+L +M + L+QN + ++PY+ L+PS++TCL+ ++LG AD + LRD A L
Sbjct: 241 VLTQVMHMAEALVQNQSLYVDPYIASLVPSILTCLIGRQLGGT-ADLVESFALRDMAASL 299
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPN-VVRLLLLPN 347
++ I K+Y H + L+ RL ++ L LDP + HYGA+ GL ++G + V+R+L++PN
Sbjct: 300 LSLIAKKYSHSSHMLKPRLVRSCLKTFLDPSKPFGAHYGAIIGLQSVGGSEVIRVLVIPN 359
Query: 348 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 381
L Y LL + + +R A RV AL+
Sbjct: 360 LHEYTKLLSDGL-----DDSARRPAAERVLNALV 388
>gi|427778557|gb|JAA54730.1| Putative transcription initiation factor tfiid subunit taf6 also
component of histone acetyltransfer [Rhipicephalus
pulchellus]
Length = 657
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 173/432 (40%), Positives = 246/432 (56%), Gaps = 57/432 (13%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++VIA+SIGISN +AA LA ++ YR++ I Q+A K M H++R L+T D D ALK
Sbjct: 15 ESMKVIAESIGISNLPDEAAKELADEITYRLKVIAQDASKFMGHAKRRKLSTFDFDNALK 74
Query: 67 LRNVEPVYGF----------ASGG-------------PLRFRRAIGYRDLFYLDDKDVEF 103
++NVEP+YGF ASG P R+ G R+LF++++K++E
Sbjct: 75 MKNVEPLYGFHCPDYVPFRYASGXXXPLYGFHCPDYVPFRYASG-GGRELFFVEEKELEL 133
Query: 104 KDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTN---- 151
+VI + LP+ PLD SI HWL+IEG+QP +PEN P V++I + +
Sbjct: 134 NEVINSQLPKLPLDVSIKAHWLSIEGIQPTVPENPPPVSKDLQRVESIDPVTKLSKVVVP 193
Query: 152 NEQKDGLP-----------VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVS 200
+ GLP V +K H LS E QLY+ +ITE V DS +AL S
Sbjct: 194 GSKVPGLPSKQERTKHVETVRVKQLATHELSVEQQLYYKEITEACVGSDDS-RRAEALQS 252
Query: 201 LATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLM 258
LA+D GLH ++P F+++ V + NN + L L+R+V LL N + +E YLH+L+
Sbjct: 253 LASDPGLHQMLPRLCTFISEGVKVNVVQNNLAFLIYLIRMVKALLDNQTLYLEKYLHELI 312
Query: 259 PSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD 317
PSV TC+V+++L R DNHW LRDF ++L+A ICK + N +QTR+T+ AL +
Sbjct: 313 PSVATCIVSRQLCTRPDVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSRALQN 372
Query: 318 PKRALTQHYGAVQGLAALGPNVVRLLLLPN---LGPYL--SLLEPEML-LEKQKNEVKRH 371
K L HYGAV GLA LGP VVR +LP LG L L EP + ++K+ E +
Sbjct: 373 DKMPLASHYGAVSGLAELGPEVVRSFVLPRVRALGEKLRQGLEEPGVSPVDKKAAEHIKQ 432
Query: 372 EAWRVYGALLQA 383
RV +L+A
Sbjct: 433 LLLRVLAPVLKA 444
>gi|302657451|ref|XP_003020447.1| hypothetical protein TRV_05467 [Trichophyton verrucosum HKI 0517]
gi|291184282|gb|EFE39829.1| hypothetical protein TRV_05467 [Trichophyton verrucosum HKI 0517]
Length = 443
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 249/424 (58%), Gaps = 34/424 (8%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI++ + D L+ DVEYRI ++++EA+K MRH +RT LTT D
Sbjct: 1 MSLWNPDNIRDVAESVGINSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+ +I APLP+ P +
Sbjct: 61 VSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNE-----QKDGLPVEIKLPVKHIL 170
S + A+EGVQP IP+N A + + S G N V +K VKHIL
Sbjct: 121 S----FTAVEGVQPTIPQNPTAADTRHLELVSKGPNANANLAAMSGNENVNVKPLVKHIL 176
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S ELQLYF+++ + S+ A SL D GLH LVPYF F++++V+ + +
Sbjct: 177 SNELQLYFERVCNAFLDESNEEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNIKDVF 236
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLADNHWELRDFTAKLV 289
+L +M ++ L++NP + I+PY+ L+P V+TCL+ ++LG + A H+ LRD ++ LV
Sbjct: 237 VLTQVMHMIEALIRNPTLYIDPYVAPLIPPVLTCLIGRQLGSSNDAVEHFALRDLSSSLV 296
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
I K+Y +TL+ RL +T L LDP + HYGA+ GL ++ GPNV+R L++PNL
Sbjct: 297 GMIAKKYSQSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIGGPNVIRELIIPNL 356
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWK 408
Y +L+ + E +++ EA +V G ++ LS++ S+
Sbjct: 357 PVYEVVLKDAVTDEG----LRKAEAEKVTGVIIAV--------------LSTIQDESLAH 398
Query: 409 TNGI 412
TNG
Sbjct: 399 TNGF 402
>gi|302506222|ref|XP_003015068.1| hypothetical protein ARB_06828 [Arthroderma benhamiae CBS 112371]
gi|291178639|gb|EFE34428.1| hypothetical protein ARB_06828 [Arthroderma benhamiae CBS 112371]
Length = 443
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 249/424 (58%), Gaps = 34/424 (8%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI++ + D L+ DVEYRI ++++EA+K MRH +RT LTT D
Sbjct: 1 MSLWNPDNIRDVAESVGINSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+ +I APLP+ P +
Sbjct: 61 VSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNE-----QKDGLPVEIKLPVKHIL 170
S + A+EGVQP IP+N A + + S G N V +K VKHIL
Sbjct: 121 S----FTAVEGVQPTIPQNPTAADTRHLELVSKGPNANANLAAMSGNENVNVKPLVKHIL 176
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S ELQLYF+++ + S+ A SL D GLH LVPYF F++++V+ + +
Sbjct: 177 SNELQLYFERVCNAFLDESNEEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNIKDIF 236
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLADNHWELRDFTAKLV 289
+L +M ++ L++NP + I+PY+ L+P V+TCL+ ++LG + A H+ LRD ++ LV
Sbjct: 237 VLTQVMHMIEALIRNPTLYIDPYVAPLIPPVLTCLIGRQLGSSNDAVEHFALRDLSSSLV 296
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
I K+Y +TL+ RL +T L LDP + HYGA+ GL ++ GPNV+R L++PNL
Sbjct: 297 GMIAKKYSQSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIGGPNVIRELIIPNL 356
Query: 349 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWK 408
Y +L+ + E +++ EA +V G ++ LS++ S+
Sbjct: 357 PVYEVVLKDAVTDEG----LRKAEAEKVTGVIIAV--------------LSTIQDESLAH 398
Query: 409 TNGI 412
TNG
Sbjct: 399 TNGF 402
>gi|258571087|ref|XP_002544347.1| hypothetical protein UREG_03864 [Uncinocarpus reesii 1704]
gi|237904617|gb|EEP79018.1| hypothetical protein UREG_03864 [Uncinocarpus reesii 1704]
Length = 446
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 237/392 (60%), Gaps = 22/392 (5%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ ++ +A+S+GI+ + + LA DVEYR+ ++++E+ K MRH +RT LTT DV AL+
Sbjct: 7 DNIKDVAESVGINALNDEVVDHLARDVEYRVSQVLEESHKFMRHGKRTLLTTQDVSNALR 66
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLRF A IG + LFY++D +V+F+ +I APLP+ P + + HW
Sbjct: 67 VLDVEPLYGYESTRPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREITFTAHW 126
Query: 125 LAIEGVQPVIPENAPVQAIA--------APSNGTNNEQKDGLP-VEIKLPVKHILSRELQ 175
LA+EGVQP IP+N P A + P+ N G V +K VKHILS+ELQ
Sbjct: 127 LAVEGVQPTIPQN-PTSADSRNLELISKGPNANANLAAMSGNENVTVKPLVKHILSKELQ 185
Query: 176 LYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFAL 235
LYF+++ + S+ A SL D GLH LVPYF F++++V+ L + +L +
Sbjct: 186 LYFERVCSAFLDESNEEYRLSAFASLKEDPGLHQLVPYFVQFISEKVTHSLKDLFVLTQM 245
Query: 236 MRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAICK 294
M + L+QN + ++PY+ L+P V+TCL+ ++L G H+ LRD L+ I K
Sbjct: 246 MHMTEALIQNKSLYVDPYVASLIPPVLTCLIGRQLEGGSDPLEHFTLRDLAGSLIGMISK 305
Query: 295 RYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNLGPYLS 353
+Y H +TL+ RL +T L +DP + HYGA+ GL ++ GP+V+R L++PNL Y
Sbjct: 306 KYSHSSHTLKPRLARTFLKNFMDPSKPFGTHYGAIIGLHSIGGPDVIRELIVPNLAMY-- 363
Query: 354 LLEPEMLLEKQKNE--VKRHEAWRVYGALLQA 383
E++L+ + +++ EA +V G ++ A
Sbjct: 364 ----EVVLKDAAGDEGLRKLEAEKVIGVIVAA 391
>gi|50311083|ref|XP_455565.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644701|emb|CAG98273.1| KLLA0F10659p [Kluyveromyces lactis]
Length = 516
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 235/402 (58%), Gaps = 62/402 (15%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ +A S+GISN + D +LA DVEYRI EI+++A+K RHS+R+TLTT DV +A
Sbjct: 16 PHDTVKDVADSLGISNTNDDVLRSLAMDVEYRILEIVEQAVKFKRHSKRSTLTTSDVAKA 75
Query: 65 LKLRNVEPVYGFASGG----PLRFRRAIGY--RDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YGF G P++F + G + L+YLDD++++F+ +I PLP P
Sbjct: 76 LRVLNVEPLYGFEEGSAKNEPVKFNKLEGANGQTLYYLDDEEIDFEKLINTPLPEVPRLP 135
Query: 119 SIVCHWLAIEGVQPVIPEN----------APVQ--AIAAPSNGTN---------NEQ--- 154
+ HWLA+EG+QP IP+N P+Q AI +P N T+ NE+
Sbjct: 136 TFTAHWLAVEGIQPAIPQNPNINELRLSQVPLQRGAIVSPLNETSVQTSLQTNVNEERQA 195
Query: 155 ----------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV----LFKQALVS 200
K G E K VKH+LS+ELQ+YF+K+ S+ + + + AL S
Sbjct: 196 TANGPISTQVKPGAASEAKPLVKHVLSKELQIYFEKVASALTSKEEDINSQRMRAAALTS 255
Query: 201 LATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 260
L +D+GLH LVPYF F+A++++ L + LL ++ ++++LL N + ++PY+H LMPS
Sbjct: 256 LKSDTGLHQLVPYFIQFIAEQITHHLEDLELLTTMLEMIYSLLSNQSVFLDPYIHSLMPS 315
Query: 261 VVTCLVAKRLGNRLADNHWE------------------LRDFTAKLVAAICKRYGHVYNT 302
++T L+AKRLG + N + +RDF + L+ + K++ V+ +
Sbjct: 316 ILTLLLAKRLGGNGSKNSSDDKIVDQQNKKEFLEKTNAVRDFASSLLDHVLKKFPKVHKS 375
Query: 303 LQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
L+ R+T+TLL LD R+ +YG V+G++ LG +R L
Sbjct: 376 LKPRVTRTLLKTFLDINRSFGTYYGCVRGVSVLGNETIRFFL 417
>gi|392865593|gb|EAS31391.2| transcription initiation factor TFIID complex 60 kDa subunit
[Coccidioides immitis RS]
Length = 446
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 238/392 (60%), Gaps = 22/392 (5%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ ++ +A+S+GI+ + + LA DVEYR+ ++++E+ K MRH +RT LTT DV AL+
Sbjct: 7 DNIKDVAESVGINALNEEVVDHLARDVEYRVSQVLEESHKFMRHGKRTLLTTQDVSNALR 66
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PL+F A IG + LFY++D +V+F+ +I APLPR P + + HW
Sbjct: 67 VLDVEPLYGYESTRPLKFGEATIGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 125 LAIEGVQPVIPENAPVQAIA--------APSNGTNNEQKDGLP-VEIKLPVKHILSRELQ 175
LA+EGVQP IP+N P A + P+ N G V +K VKHILS+ELQ
Sbjct: 127 LAVEGVQPTIPQN-PTSADSRNLELISKGPNANANLAAMSGNENVTVKPLVKHILSKELQ 185
Query: 176 LYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFAL 235
LYF+++ + S+ A SL D GLH LVPYF F++++V+ L + +L +
Sbjct: 186 LYFERVCSAFLDESNEEYRLSAFASLKEDPGLHQLVPYFVQFISEKVTHSLKDLFVLTQV 245
Query: 236 MRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAICK 294
M + L+QN + ++PY+ L+P V+TC++ ++L G +H+ LRD L+ I K
Sbjct: 246 MHMTEALIQNKTLYVDPYVASLIPPVLTCVIGRQLEGGSDPLDHFTLRDLAGSLIGMISK 305
Query: 295 RYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNLGPYLS 353
+Y H +TL+ RL +T L +DP + HYGA+ GL ++ GP+V+R L++PNL Y
Sbjct: 306 KYSHSSHTLKPRLARTFLKNFMDPSKPFGTHYGAIIGLHSIGGPDVIRELIIPNLPTY-- 363
Query: 354 LLEPEMLLEKQKNE--VKRHEAWRVYGALLQA 383
E++L+ + +++ EA +V G +L A
Sbjct: 364 ----EVVLKDVAGDEGLRKSEAEKVIGVILAA 391
>gi|189237918|ref|XP_001811805.1| PREDICTED: similar to transcription initiation factor TFIID subunit
6 [Tribolium castaneum]
gi|270006675|gb|EFA03123.1| hypothetical protein TcasGA2_TC013033 [Tribolium castaneum]
Length = 599
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 224/367 (61%), Gaps = 27/367 (7%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++VIA+SIGI N DAA LA D+ ++++ I+Q+A K + H++RT L D+D ALK
Sbjct: 17 ESMKVIAESIGIGNLPDDAAKELAEDISFKLKHIIQDAAKFVHHAKRTKLMQSDIDAALK 76
Query: 67 LRNVEPVYGF--ASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+N+EP YGF A G P RF G R+L ++++K+V D+++ +APL+ S+ HW
Sbjct: 77 AKNLEPQYGFQSAEGLPFRFASG-GGRELHFIEEKEVVLNDLLQNLNAKAPLEVSLRSHW 135
Query: 125 LAIEGVQPVIPENAP-----VQAIAA--PSNGTNNEQKDGLP------------VEIKLP 165
L I+GVQP IPEN P +Q + + P N N++ G P V+IK
Sbjct: 136 LCIDGVQPTIPENPPPVAKNIQKLESVDPINKKPNKETSGKPTTGKQKLRNVETVQIKQL 195
Query: 166 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 225
H LS E QLY+ +ITE V SD +AL SLA+D GLH ++P F+ + V
Sbjct: 196 ATHELSVEQQLYYKEITEACVG-SDEARRAEALQSLASDPGLHEMLPRMCTFIIEGVRVN 254
Query: 226 L--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELR 282
+ NN +LL LMR+V LL N + +E YLH+L+PSV TC+V+K+L R DNHW LR
Sbjct: 255 VVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELIPSVTTCIVSKQLCMRPELDNHWALR 314
Query: 283 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA-LTQHYGAVQGLAALGPNVVR 341
DF ++L++ ICK + N +QTR+T+ NAL + L+ YGA++GL+ LG V+R
Sbjct: 315 DFASRLMSQICKNFNTSTNNIQTRITRMFTNALQQGDKVPLSSLYGALEGLSELGAEVIR 374
Query: 342 LLLLPNL 348
+ +LP L
Sbjct: 375 IFILPRL 381
>gi|320580678|gb|EFW94900.1| transcription initiation factor TFIID subunit 6 [Ogataea
parapolymorpha DL-1]
Length = 499
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 155/391 (39%), Positives = 232/391 (59%), Gaps = 39/391 (9%)
Query: 5 PKETVEVIAQSIGISN-FSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
P +TV A+S+G+S+ + D A LA DVEYRI EI+++A+K MRH +R LT DVD
Sbjct: 21 PYDTVRDAAESLGLSSQLTEDVAKNLAMDVEYRIHEILEQALKFMRHGKRKILTVSDVDR 80
Query: 64 ALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
A+K+ N+EP+YG+ PL F+ A +G + L+Y+DD DVEF+ +I LP+ P TS
Sbjct: 81 AMKVLNLEPLYGYDVSRPLVFKEAMVGPGQTLYYVDDDDVEFEKLINQSLPKVPRFTSFT 140
Query: 122 CHWLAIEGVQPVIPEN---APVQAI----------------------AAPSNG----TNN 152
HWLAIEGVQP IP+N A ++ + PSNG N
Sbjct: 141 AHWLAIEGVQPTIPQNPNPAEIKQLPPNQRGSVDNILSLNNDDVSLSTNPSNGLTTVEQN 200
Query: 153 EQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVP 212
Q +++K VKH+LS+ELQLYFDK + ++ L AL SL D GLH LVP
Sbjct: 201 SQGRKKDLDVKPLVKHMLSKELQLYFDKSVAALLDETNESLRAAALESLEADPGLHQLVP 260
Query: 213 YFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 272
YF FVA+ ++ L N ++L ++ V+++LL N I ++PY+H +MP ++T L+AK++G
Sbjct: 261 YFIQFVAETITHNLKNPTILTTMLMVIYSLLSNKSIFLDPYIHAIMPCILTLLLAKKIGA 320
Query: 273 RLAD----NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP--KRALTQHY 326
R + +R+ A L+ I + YG Y TL+ R+T+TLL A L K ++ +
Sbjct: 321 RSESEDDREQFRIRELAASLLQRIMREYGSSYTTLKPRITRTLLRAFLSSATKSSIGTQF 380
Query: 327 GAVQGLAALGPNVVRLLLLPNLGPY-LSLLE 356
GA++G+ +LG V+R++++ NL + S+LE
Sbjct: 381 GAMKGMKSLGKEVIRIIMVGNLKSWSTSILE 411
>gi|312381469|gb|EFR27213.1| hypothetical protein AND_06215 [Anopheles darlingi]
Length = 862
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/369 (39%), Positives = 228/369 (61%), Gaps = 28/369 (7%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++VIA+SIG+ + DAA LA DV +++++I+Q+A K M H++R+ L+ D+D +LK
Sbjct: 209 ESMKVIAESIGVGSLPDDAAKELADDVSFKLKQIVQDAAKFMYHAKRSKLSIADIDHSLK 268
Query: 67 LRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
+RN+EP YGF + + FR A G R+L ++++K+++ D+++ P+ PL+T++ HWL
Sbjct: 269 VRNIEPQYGFVNPDFIPFRFASGGGRELHFVEEKEIDLSDLVQGGPPKIPLETTLRAHWL 328
Query: 126 AIEGVQPVIPENAP-----VQAI------------------AAPSNGTNNEQKDGLPVEI 162
A++GVQP +PEN P VQA+ P+ ++ K+ V++
Sbjct: 329 AVDGVQPTVPENPPPLSKDVQALDSVNPAHKLDKTHLKDTTGKPAISKTHKLKNVETVQV 388
Query: 163 KLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEV 222
K H LS E QLY+ +ITE V SD +AL SL+ D GLH ++P F+A+ V
Sbjct: 389 KQLATHELSVEQQLYYKEITEACVG-SDEARRAEALTSLSCDPGLHEMLPRMCTFIAEGV 447
Query: 223 SRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHW 279
+ NN +LL LMR+V LL NP + +E YLH+L+P V TC+V+++L R DNHW
Sbjct: 448 KVNVVQNNLALLIYLMRMVRALLDNPALYLEKYLHELIPCVSTCIVSRQLCMRPEIDNHW 507
Query: 280 ELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNV 339
LRDF A+L+A ICK + N LQTR+T+ AL K L+ YGA++GL+ LG V
Sbjct: 508 ALRDFAARLMAQICKNFNTSTNNLQTRVTRLFSAALTSDKTPLSSMYGALEGLSELGTEV 567
Query: 340 VRLLLLPNL 348
+++ ++P L
Sbjct: 568 IKVFIIPRL 576
>gi|119183250|ref|XP_001242685.1| hypothetical protein CIMG_06581 [Coccidioides immitis RS]
Length = 1029
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 238/392 (60%), Gaps = 22/392 (5%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ ++ +A+S+GI+ + + LA DVEYR+ ++++E+ K MRH +RT LTT DV AL+
Sbjct: 7 DNIKDVAESVGINALNEEVVDHLARDVEYRVSQVLEESHKFMRHGKRTLLTTQDVSNALR 66
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PL+F A IG + LFY++D +V+F+ +I APLPR P + + HW
Sbjct: 67 VLDVEPLYGYESTRPLKFGEATIGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 125 LAIEGVQPVIPENAPVQAIA--------APSNGTNNEQKDGLP-VEIKLPVKHILSRELQ 175
LA+EGVQP IP+N P A + P+ N G V +K VKHILS+ELQ
Sbjct: 127 LAVEGVQPTIPQN-PTSADSRNLELISKGPNANANLAAMSGNENVTVKPLVKHILSKELQ 185
Query: 176 LYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFAL 235
LYF+++ + S+ A SL D GLH LVPYF F++++V+ L + +L +
Sbjct: 186 LYFERVCSAFLDESNEEYRLSAFASLKEDPGLHQLVPYFVQFISEKVTHSLKDLFVLTQV 245
Query: 236 MRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAICK 294
M + L+QN + ++PY+ L+P V+TC++ ++L G +H+ LRD L+ I K
Sbjct: 246 MHMTEALIQNKTLYVDPYVASLIPPVLTCVIGRQLEGGSDPLDHFTLRDLAGSLIGMISK 305
Query: 295 RYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNLGPYLS 353
+Y H +TL+ RL +T L +DP + HYGA+ GL ++ GP+V+R L++PNL Y
Sbjct: 306 KYSHSSHTLKPRLARTFLKNFMDPSKPFGTHYGAIIGLHSIGGPDVIRELIIPNLPTY-- 363
Query: 354 LLEPEMLLEKQKNE--VKRHEAWRVYGALLQA 383
E++L+ + +++ EA +V G +L A
Sbjct: 364 ----EVVLKDVAGDEGLRKSEAEKVIGVILAA 391
>gi|66544429|ref|XP_393233.2| PREDICTED: transcription initiation factor TFIID subunit 6 [Apis
mellifera]
Length = 629
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 150/380 (39%), Positives = 228/380 (60%), Gaps = 34/380 (8%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+ + +E+++VIA+SIG+ NF +AA LA DV YR++EI+Q+A K MRH +R +TT D+
Sbjct: 10 TTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIIQDAAKFMRHGKRQRMTTHDI 69
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIE----APLPRAPL 116
D ALK++N+EP YGF + + FR A G R+L ++++K+++ +VI P+ PL
Sbjct: 70 DHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEVISMSGGQTWPKLPL 129
Query: 117 DTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQ-------------- 154
+ ++ HWL I+GVQP IPEN P ++++ S TN Q
Sbjct: 130 EITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESVDPTSKLTNKSQNIGVGKPGGGGKSQ 189
Query: 155 --KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVP 212
++ V +K H LS E QLY+ +ITE V SD +AL SL+ D GLH ++
Sbjct: 190 KLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEALQSLSADPGLHEMLA 248
Query: 213 YFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 270
F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PS+ TC+V+++L
Sbjct: 249 RMCTFIAEGVRVNVVQNNLALLIYLMRMVKALLDNPSLYLEKYLHELIPSIATCIVSRQL 308
Query: 271 GNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL-DPKRALTQHYGA 328
R DNHW LRDF ++L+A ICK + N +QTR+T+ AL + + L YGA
Sbjct: 309 CMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQALAKNSQTPLASLYGA 368
Query: 329 VQGLAALGPNVVRLLLLPNL 348
++GL LGP V++ L++P +
Sbjct: 369 IEGLCELGPEVIKALVIPKI 388
>gi|156395880|ref|XP_001637338.1| predicted protein [Nematostella vectensis]
gi|156224449|gb|EDO45275.1| predicted protein [Nematostella vectensis]
Length = 662
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/385 (40%), Positives = 225/385 (58%), Gaps = 44/385 (11%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++VIA+SIG+ N + +A L + YR++++ QE+ K M+ S+R L T D+D AL+
Sbjct: 19 ESIKVIAESIGVRNLNHEAIGTLMEEGTYRLKQLTQESSKFMQKSKRKKLMTKDIDNALR 78
Query: 67 LRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
L+NVEP+YGF + + FR A G R++F+ DD +++ DVI LPR P+D S+ HWL
Sbjct: 79 LQNVEPLYGFVAQDFIPFRFASGGGREVFFYDDPEIDLNDVINTQLPRIPVDVSLKAHWL 138
Query: 126 AIEGVQPVIPENAP---------------VQAIAAPSNGTNNEQKDGLPVEIK------- 163
+IEG+QP IPEN P AAP +++ V+ K
Sbjct: 139 SIEGLQPAIPENPPPALADQLKREEQKPVFTTKAAPDKTKPGQKRPKAEVDSKSNKKPAI 198
Query: 164 -------LP----------VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSG 206
+P V H LS E QLY+ +ITE V +S +AL SLATD G
Sbjct: 199 TKHTISSIPSNKADKTKGLVTHELSVEQQLYYKEITEACVGSCES-RRTEALQSLATDPG 257
Query: 207 LHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTC 264
L+ ++P F F+++ V+ NN LL LMR+V LL N + +E YLH+++P+VVTC
Sbjct: 258 LYQMLPRFCTFISEGVRVNVAQNNLVLLIYLMRMVKALLDNSTLFLEKYLHEMIPAVVTC 317
Query: 265 LVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT 323
+V+K+L + DNHW LRDF A+LVA IC+ + N++QTR+TKT AL K L
Sbjct: 318 VVSKQLCPKPEVDNHWALRDFGARLVAQICRSFNSTTNSVQTRVTKTYCKALHQEKAPLA 377
Query: 324 QHYGAVQGLAALGPNVVRLLLLPNL 348
HYGA+ GLA LG V+++L+LP L
Sbjct: 378 THYGAITGLAELGQEVIKVLVLPRL 402
>gi|303319711|ref|XP_003069855.1| TATA box binding protein associated factor containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240109541|gb|EER27710.1| TATA box binding protein associated factor containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|320034141|gb|EFW16086.1| TAF6 RNA polymerase 2 [Coccidioides posadasii str. Silveira]
Length = 446
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 237/392 (60%), Gaps = 22/392 (5%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ ++ +A+S+GI+ + + LA DVEYR+ ++++E+ K MRH +RT LTT DV AL+
Sbjct: 7 DNIKDVAESVGINALNEEVVDHLARDVEYRVSQVLEESHKFMRHGKRTLLTTQDVSNALR 66
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PL+F A IG + LFY++D +V+F+ +I APLPR P + + HW
Sbjct: 67 VLDVEPLYGYESTRPLKFGEATIGPGQPLFYVEDDEVDFEKLINAPLPRVPREITFTAHW 126
Query: 125 LAIEGVQPVIPENAPVQAIA--------APSNGTNNEQKDGLP-VEIKLPVKHILSRELQ 175
LA+EGVQP IP+N P A + P+ N G V +K VKHILS+ELQ
Sbjct: 127 LAVEGVQPTIPQN-PTSADSRNLELISKGPNANANLAAMSGNENVTVKPLVKHILSKELQ 185
Query: 176 LYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFAL 235
LYF+++ + S+ A SL D GLH LVPYF F++++V+ L + +L +
Sbjct: 186 LYFERVCSAFLDESNEEYRLSAFASLKEDPGLHQLVPYFVQFISEKVTHSLKDLFVLTQV 245
Query: 236 MRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAICK 294
M + L+QN + ++PY+ L+P V+TC++ ++L G +H+ LRD L+ I K
Sbjct: 246 MHMTEALIQNKTLYVDPYVASLIPPVLTCVIGRQLEGGSDPLDHFTLRDLAGSLIGMISK 305
Query: 295 RYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNLGPYLS 353
+Y H + L+ RL +T L +DP + HYGA+ GL ++ GP+V+R L++PNL Y
Sbjct: 306 KYSHSSHRLKPRLARTFLKNFMDPSKPFGTHYGAIIGLHSIGGPDVIRELIIPNLPTY-- 363
Query: 354 LLEPEMLLEKQKNE--VKRHEAWRVYGALLQA 383
E++L+ + +++ EA +V G +L A
Sbjct: 364 ----EVVLKDVAGDEGLRKSEAEKVIGVILAA 391
>gi|194874194|ref|XP_001973357.1| GG16046 [Drosophila erecta]
gi|190655140|gb|EDV52383.1| GG16046 [Drosophila erecta]
Length = 611
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/386 (38%), Positives = 227/386 (58%), Gaps = 28/386 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S + E+++VIA+SIG+ + S DAA LA DV +++ I+Q+A K M H++R L+ D+
Sbjct: 19 SSISSESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMHHAKRQKLSVRDI 78
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALK+RNVEP YGF + + FR A G R+L + +DK+++ ++ + + PLD ++
Sbjct: 79 DMALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSSNSVKIPLDLTL 138
Query: 121 VCHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDG 157
HW +EGVQP +PEN P A P+ G ++ K+
Sbjct: 139 RSHWFVVEGVQPTVPENPPPLSKDSQFLDSVNPVIKLDQGLNKDAAGKPTTGKIHKLKNV 198
Query: 158 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F
Sbjct: 199 ETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTF 257
Query: 218 VADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-L 274
+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R
Sbjct: 258 IAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPE 317
Query: 275 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+
Sbjct: 318 LDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSE 377
Query: 335 LGPNVVRLLLLPNLGPYLSLLEPEML 360
LG V+++ ++P L +EP +L
Sbjct: 378 LGGEVIKVFIIPRLKFISERIEPHLL 403
>gi|327353210|gb|EGE82067.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces dermatitidis ATCC 18188]
Length = 495
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/382 (40%), Positives = 229/382 (59%), Gaps = 26/382 (6%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E + +A+S+GI + + LA DVEYRI ++++EA+K MRH++RT LTT D
Sbjct: 1 MSVWNPENIRDVAESVGIGALNDEVVENLARDVEYRISQVLEEALKFMRHAKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+ +I APLPR P +
Sbjct: 61 VSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
+ HWLA+EGVQP IP+N A + I S G N N + V +K VKHIL
Sbjct: 121 TFTAHWLAVEGVQPTIPQNPTGADSRNIELVSKGPNANANLAAMSGNDNVSVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + + A SL D GLH LVPYF F++++V+ L +
Sbjct: 181 SKELQLYFEKVCTAFLDELNEEYRLSAFSSLKEDPGLHQLVPYFVQFISEKVTHSLKDLF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN------------- 277
+L +M + L+QN + ++PY+ L+P V+TCL+ ++LG+
Sbjct: 241 VLTQVMHMTEALIQNTTLYVDPYVPSLIPPVLTCLIGRQLGSTTLSTGAGPTPTPTPTDP 300
Query: 278 --HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 335
H+ LRD A L++ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL ++
Sbjct: 301 LEHFVLRDLAASLISMIARKYSHSSHTLRPRLARTFLKNFLDPGKPLGTHYGAIIGLQSI 360
Query: 336 GP-NVVRLLLLPNLGPYLSLLE 356
G +VVR L++PNL Y +L+
Sbjct: 361 GGVDVVRELIVPNLRTYEVVLK 382
>gi|195496206|ref|XP_002095595.1| GE19612 [Drosophila yakuba]
gi|194181696|gb|EDW95307.1| GE19612 [Drosophila yakuba]
Length = 611
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/386 (38%), Positives = 227/386 (58%), Gaps = 28/386 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S + E+++VIA+SIG+ + S DAA LA DV +++ I+Q+A K M H++R L+ D+
Sbjct: 19 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMHHAKRQKLSVRDI 78
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALK+RNVEP YGF + + FR A G R+L + +DK+++ ++ + + PLD ++
Sbjct: 79 DMALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSSNSVKIPLDLTL 138
Query: 121 VCHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDG 157
HW +EGVQP +PEN P A P+ G ++ K+
Sbjct: 139 RSHWFVVEGVQPTVPENPPPLSKDSQFLDSVNPVIKLDQGLNKDAAGKPTTGKIHKLKNV 198
Query: 158 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F
Sbjct: 199 ETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTF 257
Query: 218 VADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-L 274
+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R
Sbjct: 258 IAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPE 317
Query: 275 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+
Sbjct: 318 LDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSE 377
Query: 335 LGPNVVRLLLLPNLGPYLSLLEPEML 360
LG V+++ ++P L +EP +L
Sbjct: 378 LGGEVIKVFIIPRLKFISERIEPHLL 403
>gi|239612258|gb|EEQ89245.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces dermatitidis ER-3]
Length = 495
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/382 (40%), Positives = 229/382 (59%), Gaps = 26/382 (6%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E + +A+S+GI + + LA DVEYRI ++++EA+K MRH++RT LTT D
Sbjct: 1 MSVWNPENIRDVAESVGIGALNDEVVENLARDVEYRISQVLEEALKFMRHAKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+ +I APLPR P +
Sbjct: 61 VSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
+ HWLA+EGVQP IP+N A + I S G N N + V +K VKHIL
Sbjct: 121 TFTAHWLAVEGVQPTIPQNPTGADSRNIELVSKGPNANANLAAMSGNDNVSVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + + A SL D GLH LVPYF F++++V+ L +
Sbjct: 181 SKELQLYFEKVCTAFLDELNEEYRLSAFSSLKEDPGLHQLVPYFVQFISEKVTHSLKDLF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN------------- 277
+L +M + L+QN + ++PY+ L+P V+TCL+ ++LG+
Sbjct: 241 VLTQVMHMTEALIQNTTLYVDPYVPSLIPPVLTCLIGRQLGSTTLSTGAGPTPTPTPTDP 300
Query: 278 --HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 335
H+ LRD A L++ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL ++
Sbjct: 301 LEHFVLRDLAASLISMIARKYSHSSHTLRPRLARTFLKNFLDPGKPLGTHYGAIIGLQSI 360
Query: 336 GP-NVVRLLLLPNLGPYLSLLE 356
G +VVR L++PNL Y +L+
Sbjct: 361 GGVDVVRELIVPNLRTYEVVLK 382
>gi|437333|gb|AAA16536.1| TAFII60 [Drosophila melanogaster]
Length = 592
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/387 (38%), Positives = 226/387 (58%), Gaps = 30/387 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S + E+++VIA+SIG+ + S DAA LA DV +++ I+Q+A K M H++R L+ D+
Sbjct: 5 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDI 64
Query: 62 DEALKLRNVEPVYGFASGG--PLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 119
D +LK+RNVEP YGF + PLRF G R+L + +DK+++ ++ + PLD +
Sbjct: 65 DMSLKVRNVEPQYGFVAKDFIPLRFASG-GGRELHFTEDKEIDLGEITSTNSVKIPLDLT 123
Query: 120 IVCHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKD 156
+ HW +EGVQP +PEN P A P+ G ++ K+
Sbjct: 124 LRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKN 183
Query: 157 GLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTY 216
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P
Sbjct: 184 VETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCT 242
Query: 217 FVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR- 273
F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R
Sbjct: 243 FIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRP 302
Query: 274 LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 333
DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+
Sbjct: 303 ELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLS 362
Query: 334 ALGPNVVRLLLLPNLGPYLSLLEPEML 360
LG V+++ ++P L +EP +L
Sbjct: 363 ELGGEVIKVFIIPRLKFISERIEPHLL 389
>gi|255719722|ref|XP_002556141.1| KLTH0H06006p [Lachancea thermotolerans]
gi|238942107|emb|CAR30279.1| KLTH0H06006p [Lachancea thermotolerans CBS 6340]
Length = 511
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 238/423 (56%), Gaps = 61/423 (14%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A S+GI+N S D +LA DVEYRI EI+++A+K RH++R LTT+D+ A
Sbjct: 13 PQDTVKDVADSLGITNISDDVLRSLAMDVEYRILEIVEQAVKFKRHAKREVLTTEDIARA 72
Query: 65 LKLRNVEPVYGFASGGP----LRFRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G F + A G + L+YL+D++V+F +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYQDGSARAKDASFSKVNAPGGQTLYYLNDEEVDFDKLINEPLPKVPRLP 132
Query: 119 SIVCHWLAIEGVQPVIPENAPVQ------------AIAAPSNGTNNEQ------------ 154
+ HWLAIEGVQP IP+N + AI N T+ +
Sbjct: 133 TFTTHWLAIEGVQPTIPQNPSLNDIRMSQPPIVRGAIVTTINDTSFQTSASDEKETQHIS 192
Query: 155 --KDGLPVEIKLPVKHILSRELQLYFDKITELAVS--RSDSV--LFKQALVSLATDSGLH 208
K G E+K VKH+LS+ELQ+YFDK+ +S R D L AL SL +D+GLH
Sbjct: 193 LIKPGQANEVKPLVKHVLSKELQIYFDKVVGALISKDRDDKAHHLRAAALTSLRSDTGLH 252
Query: 209 PLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 268
LVPYF F+A++++ L++ LL ++ ++++LL N H+ ++PY+H LMPS++T L+AK
Sbjct: 253 QLVPYFIQFIAEQITHNLSDLDLLTTMLEMIYSLLSNTHVFLDPYIHSLMPSILTLLLAK 312
Query: 269 RLGN-----------------------RLADNHWELRDFTAKLVAAICKRYGHVYNTLQT 305
+LG+ + LRDF A L+ + +++ VY +L+
Sbjct: 313 KLGDNPPPNSSKEQREASEKVSKDTGTEFLEKTNALRDFAASLLDHVLRKFPQVYKSLKP 372
Query: 306 RLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSL-LEPEMLLEKQ 364
R+ +TLL LD R+ +YG ++G+A LGP VR L NL + +L E E
Sbjct: 373 RVMRTLLKTFLDTNRSFGTYYGCIKGVAVLGPESVR-FFLGNLQSWANLVFEEHTTKEND 431
Query: 365 KNE 367
K+E
Sbjct: 432 KDE 434
>gi|195591563|ref|XP_002085509.1| GD14815 [Drosophila simulans]
gi|194197518|gb|EDX11094.1| GD14815 [Drosophila simulans]
Length = 611
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/384 (38%), Positives = 226/384 (58%), Gaps = 28/384 (7%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+ E+++VIA+SIG+ + S DAA LA DV +++ I+Q++ K M H++R L+ D+D
Sbjct: 21 ISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDSAKFMNHAKRQKLSVRDIDM 80
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
ALK+RNVEP YGF + + FR A G R+L + +DK+++ ++ + + PLD ++
Sbjct: 81 ALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSSNSVKIPLDLTLRS 140
Query: 123 HWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDGLP 159
HW +EGVQP +PEN P A P+ G ++ K+
Sbjct: 141 HWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAAGKPTTGKVHKLKNVET 200
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F+A
Sbjct: 201 IHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTFIA 259
Query: 220 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LAD 276
+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R D
Sbjct: 260 EGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPELD 319
Query: 277 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALG 336
NHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+ LG
Sbjct: 320 NHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSELG 379
Query: 337 PNVVRLLLLPNLGPYLSLLEPEML 360
V+++ ++P L +EP +L
Sbjct: 380 GEVIKVFIIPRLKFISERIEPHLL 403
>gi|195354204|ref|XP_002043589.1| GM19603 [Drosophila sechellia]
gi|194127757|gb|EDW49800.1| GM19603 [Drosophila sechellia]
Length = 611
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/384 (38%), Positives = 226/384 (58%), Gaps = 28/384 (7%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+ E+++VIA+SIG+ + S DAA LA DV +++ I+Q++ K M H++R L+ D+D
Sbjct: 21 ISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDSAKFMNHAKRQKLSVRDIDM 80
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
ALK+RNVEP YGF + + FR A G R+L + +DK+++ ++ + + PLD ++
Sbjct: 81 ALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSSNSVKIPLDLTLRS 140
Query: 123 HWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDGLP 159
HW +EGVQP +PEN P A P+ G ++ K+
Sbjct: 141 HWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAAGKPTTGKVHKLKNVET 200
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F+A
Sbjct: 201 IHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTFIA 259
Query: 220 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LAD 276
+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R D
Sbjct: 260 EGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPELD 319
Query: 277 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALG 336
NHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+ LG
Sbjct: 320 NHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSELG 379
Query: 337 PNVVRLLLLPNLGPYLSLLEPEML 360
V+++ ++P L +EP +L
Sbjct: 380 GEVIKVFIIPRLKFISERIEPHLL 403
>gi|442633400|ref|NP_001262056.1| TBP-associated factor 6, isoform B [Drosophila melanogaster]
gi|440216014|gb|AGB94749.1| TBP-associated factor 6, isoform B [Drosophila melanogaster]
Length = 605
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 226/386 (58%), Gaps = 28/386 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S + E+++VIA+SIG+ + S DAA LA DV +++ I+Q+A K M H++R L+ D+
Sbjct: 19 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDI 78
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D +LK+RNVEP YGF + + FR A G R+L + +DK+++ ++ + PLD ++
Sbjct: 79 DMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLDLTL 138
Query: 121 VCHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDG 157
HW +EGVQP +PEN P A P+ G ++ K+
Sbjct: 139 RSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKNV 198
Query: 158 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F
Sbjct: 199 ETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTF 257
Query: 218 VADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-L 274
+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R
Sbjct: 258 IAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPE 317
Query: 275 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+
Sbjct: 318 LDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSE 377
Query: 335 LGPNVVRLLLLPNLGPYLSLLEPEML 360
LG V+++ ++P L +EP +L
Sbjct: 378 LGGEVIKVFIIPRLKFISERIEPHLL 403
>gi|24666846|ref|NP_524161.2| TBP-associated factor 6, isoform A [Drosophila melanogaster]
gi|27923999|sp|P49847.2|TAF6_DROME RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=TAFII-60; AltName: Full=TAFII-62; AltName:
Full=Transcription initiation factor TFIID 62 kDa
subunit; Short=p62
gi|15291715|gb|AAK93126.1| LD24529p [Drosophila melanogaster]
gi|23093125|gb|AAF49139.2| TBP-associated factor 6, isoform A [Drosophila melanogaster]
gi|220943388|gb|ACL84237.1| Taf6-PA [synthetic construct]
Length = 606
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 226/386 (58%), Gaps = 28/386 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S + E+++VIA+SIG+ + S DAA LA DV +++ I+Q+A K M H++R L+ D+
Sbjct: 19 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDI 78
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D +LK+RNVEP YGF + + FR A G R+L + +DK+++ ++ + PLD ++
Sbjct: 79 DMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLDLTL 138
Query: 121 VCHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDG 157
HW +EGVQP +PEN P A P+ G ++ K+
Sbjct: 139 RSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKNV 198
Query: 158 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F
Sbjct: 199 ETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTF 257
Query: 218 VADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-L 274
+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R
Sbjct: 258 IAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPE 317
Query: 275 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+
Sbjct: 318 LDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSE 377
Query: 335 LGPNVVRLLLLPNLGPYLSLLEPEML 360
LG V+++ ++P L +EP +L
Sbjct: 378 LGGEVIKVFIIPRLKFISERIEPHLL 403
>gi|630879|pir||S42220 transcription initiation factor IID chain p62 - fruit fly
(Drosophila melanogaster)
gi|458682|gb|AAC46480.1| transcription initiation factor TFIID 62 kDa subunit [Drosophila
melanogaster]
Length = 592
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 226/386 (58%), Gaps = 28/386 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S + E+++VIA+SIG+ + S DAA LA DV +++ I+Q+A K M H++R L+ D+
Sbjct: 5 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDI 64
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D +LK+RNVEP YGF + + FR A G R+L + +DK+++ ++ + PLD ++
Sbjct: 65 DMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLDLTL 124
Query: 121 VCHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDG 157
HW +EGVQP +PEN P A P+ G ++ K+
Sbjct: 125 RSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKNV 184
Query: 158 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F
Sbjct: 185 ETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTF 243
Query: 218 VADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-L 274
+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R
Sbjct: 244 IAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPE 303
Query: 275 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+
Sbjct: 304 LDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSE 363
Query: 335 LGPNVVRLLLLPNLGPYLSLLEPEML 360
LG V+++ ++P L +EP +L
Sbjct: 364 LGGEVIKVFIIPRLKFISERIEPHLL 389
>gi|350407905|ref|XP_003488237.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Bombus impatiens]
Length = 640
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/380 (39%), Positives = 228/380 (60%), Gaps = 34/380 (8%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+ + +E+++VIA+SIG+ NF +AA LA DV YR++EI+Q+A K MRH +R +TT D+
Sbjct: 20 TTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIIQDAAKFMRHGKRQRMTTHDI 79
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIE----APLPRAPL 116
D ALK++N+EP YGF + + FR A G R+L ++++K+++ +VI P+ PL
Sbjct: 80 DHALKIKNIEPTYGFFAKDHVPFRFASGGGRELHFVEEKEIDLNEVISMSGGQTWPKLPL 139
Query: 117 DTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQ-------------- 154
+ ++ HWL I+GVQP IPEN P ++++ S TN Q
Sbjct: 140 EITLRAHWLCIDGVQPTIPENPPPVSKDIQKLESVDPTSKLTNKSQNIGVGKPGGGGKSQ 199
Query: 155 --KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVP 212
++ V +K H LS E QLY+ +ITE V SD +AL SL+ D GLH ++
Sbjct: 200 KLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEALQSLSADPGLHEMLA 258
Query: 213 YFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 270
F+A+ V + N+ +LL LMR+V LL NP + +E YLH+L+PS+ TC+V+++L
Sbjct: 259 RMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLHELIPSIATCIVSRQL 318
Query: 271 GNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL-DPKRALTQHYGA 328
R DNHW LRDF ++L+A ICK + N +QTR+T+ AL + + L YGA
Sbjct: 319 CMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQALAKNSQTPLASLYGA 378
Query: 329 VQGLAALGPNVVRLLLLPNL 348
++GL LGP V++ L++P +
Sbjct: 379 IEGLCELGPEVIKALVIPKI 398
>gi|354545571|emb|CCE42299.1| hypothetical protein CPAR2_808480 [Candida parapsilosis]
Length = 499
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 227/392 (57%), Gaps = 49/392 (12%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ A S+GI N +AA LA DVEYRI EI++ AIK MRHS+R L T D+D A
Sbjct: 14 PYDTVKDSADSLGI-NLPDEAAKNLAMDVEYRIHEILELAIKFMRHSKRKLLMTSDIDYA 72
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ NVEP+YG+ + P+ F+ + G + L+YLDD+++EF+ +I LP+ P +
Sbjct: 73 LKILNVEPLYGYDNSQPINFKETMVGAGGQTLYYLDDQEIEFEKLINQELPKVPRRCNFT 132
Query: 122 CHWLAIEGVQPVIPEN---------------------------------APVQAIAAPSN 148
HWLAIEGVQP++P+N + V +
Sbjct: 133 AHWLAIEGVQPMVPQNPLPSDIKNLPPAIRGATSSYLGNDILTLGSNSASGVDGQDGTED 192
Query: 149 GTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLFKQALVSLATDSG 206
G+ N+ + K VKH+LS+EL+LYFDK+ E+ +S L AL SL +D G
Sbjct: 193 GSKNKNPTDKEFDTKPLVKHVLSKELKLYFDKVVEVLISTDPEKESLKNAALTSLKSDPG 252
Query: 207 LHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLV 266
LH LVPYF FVA++++ L N +L ++ V+ L N I ++PY+H LMP ++T L+
Sbjct: 253 LHQLVPYFIQFVAEQITNELRNIEILSTMLEVISALADNKTIFLDPYVHALMPCILTLLL 312
Query: 267 AKRLG---NRLADNHWE-------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 316
AKR+G N+ A+N+ E +R+F A L+ I K +G Y+TL+ R+T+TLL ALL
Sbjct: 313 AKRIGPIINKSAENYQEALRDQLTIREFAAILLEHIIKVHGSSYSTLRPRVTRTLLRALL 372
Query: 317 DPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
D + + YGA+ GL G V++L+L+ NL
Sbjct: 373 DSTKPVGTQYGALLGLRNFGNEVLKLVLVGNL 404
>gi|383847259|ref|XP_003699272.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Megachile rotundata]
Length = 630
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 149/380 (39%), Positives = 228/380 (60%), Gaps = 34/380 (8%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+ + +E+++VIA+SIG+ NF +AA LA DV YR++EI+Q+A K MRH +R +TT D+
Sbjct: 10 TTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIIQDAAKFMRHGKRQRMTTYDI 69
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIE----APLPRAPL 116
D ALK++N+EP YGF + + FR A G R+L ++++K+++ +VI P+ PL
Sbjct: 70 DHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEVISMSSGQTWPKLPL 129
Query: 117 DTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQ-------------- 154
+ ++ HWL I+GVQP IPEN P ++++ S +N Q
Sbjct: 130 EITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESVDPTSKLSNKSQNIGVGKPGGGGKSQ 189
Query: 155 --KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVP 212
++ V +K H LS E QLY+ +ITE V SD +AL SL+ D GLH ++
Sbjct: 190 KLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEALQSLSADPGLHEMLA 248
Query: 213 YFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 270
F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PS+ TC+V+++L
Sbjct: 249 RMCTFIAEGVRVNVVQNNLALLIYLMRMVKALLDNPSLYLEKYLHELIPSIATCIVSRQL 308
Query: 271 GNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL-DPKRALTQHYGA 328
R DNHW LRDF ++L+A ICK + N +QTR+T+ AL + + L YGA
Sbjct: 309 CMRPDVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQALAKNSQTPLASLYGA 368
Query: 329 VQGLAALGPNVVRLLLLPNL 348
++GL LGP V++ L++P +
Sbjct: 369 IEGLCELGPEVIKALVIPKI 388
>gi|195377535|ref|XP_002047544.1| GJ13501 [Drosophila virilis]
gi|194154702|gb|EDW69886.1| GJ13501 [Drosophila virilis]
Length = 616
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 155/425 (36%), Positives = 240/425 (56%), Gaps = 30/425 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S + E+++VIA+SIG+ + S DAA LA DV +++ I+Q+A K M H++R L+ D+
Sbjct: 19 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMHHAKRQKLSVKDI 78
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D +LK+RN+EP YGF + + FR A G R+L + +DK+++ ++ + PLD ++
Sbjct: 79 DMSLKVRNIEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLSEITANSSVKIPLDLTL 138
Query: 121 VCHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDG 157
HW +EG+QP +PEN P A P+ G ++ K+
Sbjct: 139 RSHWFVVEGIQPTVPENPPPLSKDSQFLDSVNPVIKLDQGLNKDAAGKPTTGKIHKLKNV 198
Query: 158 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F
Sbjct: 199 ETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRAEALQSLGSDPGLHEMLPRMCTF 257
Query: 218 VADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-L 274
+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R
Sbjct: 258 IAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPE 317
Query: 275 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+
Sbjct: 318 LDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSE 377
Query: 335 LGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKI 394
LG V+++ ++P L +EP +L N K A A+LQ I +++
Sbjct: 378 LGGEVIKVFIIPRLKFISERIEPHLLGTSMSNTDK--TAAGHIRAMLQKCCPPILKQMRA 435
Query: 395 FPPLS 399
P ++
Sbjct: 436 APDIA 440
>gi|340721969|ref|XP_003399385.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Bombus terrestris]
Length = 640
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 148/380 (38%), Positives = 228/380 (60%), Gaps = 34/380 (8%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+ + +E+++VIA+SIG+ NF +AA LA DV YR++EI+Q+A K MRH +R +TT D+
Sbjct: 20 TTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIIQDAAKFMRHGKRQRMTTHDI 79
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIE----APLPRAPL 116
D ALK++N+EP YGF + + FR A G R+L ++++K+++ +V+ P+ PL
Sbjct: 80 DHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEVVSISGGQTWPKLPL 139
Query: 117 DTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQ-------------- 154
+ ++ HWL I+GVQP IPEN P ++++ S TN Q
Sbjct: 140 EITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESVDPTSKLTNKSQNIGVGKPGGGGKSQ 199
Query: 155 --KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVP 212
++ V +K H LS E QLY+ +ITE V SD +AL SL+ D GLH ++
Sbjct: 200 KLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEALQSLSADPGLHEMLA 258
Query: 213 YFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 270
F+A+ V + N+ +LL LMR+V LL NP + +E YLH+L+PS+ TC+V+++L
Sbjct: 259 RMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLHELIPSIATCIVSRQL 318
Query: 271 GNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL-DPKRALTQHYGA 328
R DNHW LRDF ++L+A ICK + N +QTR+T+ AL + + L YGA
Sbjct: 319 CMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQALAKNSQTPLASLYGA 378
Query: 329 VQGLAALGPNVVRLLLLPNL 348
++GL LGP V++ L++P +
Sbjct: 379 IEGLCELGPEVIKALVIPKI 398
>gi|261202442|ref|XP_002628435.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces dermatitidis SLH14081]
gi|239590532|gb|EEQ73113.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces dermatitidis SLH14081]
Length = 499
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 229/386 (59%), Gaps = 30/386 (7%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ E + +A+S+GI + + LA DVEYRI ++++EA+K MRH++RT LTT D
Sbjct: 1 MSVWNPENIRDVAESVGIGALNDEVVENLARDVEYRISQVLEEALKFMRHAKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+ +I APLPR P +
Sbjct: 61 VSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP----VEIKLPVKHIL 170
+ HWLA+EGVQP IP+N A + I S G N N + V +K VKHIL
Sbjct: 121 TFTAHWLAVEGVQPTIPQNPTGADSRNIELVSKGPNANANLAAMSGNDNVSVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + + A SL D GLH LVPYF F++++V+ L +
Sbjct: 181 SKELQLYFEKVCTAFLDELNEEYRLSAFSSLKEDPGLHQLVPYFVQFISEKVTHSLKDLF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN------------- 277
+L +M + L+QN + ++PY+ L+P V+TCL+ ++LG+
Sbjct: 241 VLTQVMHMTEALIQNTTLYVDPYVPSLIPPVLTCLIGRQLGSTTLSTGAGPTPTPTPTPT 300
Query: 278 ------HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG 331
H+ LRD A L++ I ++Y H +TL+ RL +T L LDP + L HYGA+ G
Sbjct: 301 PTDPLEHFVLRDLAASLISMIARKYSHSSHTLRPRLARTFLKNFLDPGKPLGTHYGAIIG 360
Query: 332 LAALGP-NVVRLLLLPNLGPYLSLLE 356
L ++G +VVR L++PNL Y +L+
Sbjct: 361 LQSIGGVDVVRELIVPNLRTYEVVLK 386
>gi|198463837|ref|XP_001352957.2| GA16761 [Drosophila pseudoobscura pseudoobscura]
gi|198151433|gb|EAL30458.2| GA16761 [Drosophila pseudoobscura pseudoobscura]
Length = 620
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 223/386 (57%), Gaps = 28/386 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ E+++VIA+SIG+ S DAA L D+ +++ I+Q+A K H++R + D+
Sbjct: 19 SVYSAESIKVIAESIGVGTLSDDAAKELGEDISIKLKRIVQDAAKFSNHAKRQKILISDI 78
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D +LK+RNVEP YGF S + FR A G R+L + +DK+++ ++ + PLDT++
Sbjct: 79 DMSLKVRNVEPQYGFVSKDNIPFRFATGGGRELHFTEDKEIDLSEITANNAVKIPLDTTL 138
Query: 121 VCHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDG 157
HW +EG+QP +PEN P A P+ G ++ K+
Sbjct: 139 RSHWFVVEGIQPTVPENPPPLSKDSQFVDSVNPVIKLDQGLNKDAAGKPTTGKIHKLKNV 198
Query: 158 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F
Sbjct: 199 ETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTF 257
Query: 218 VADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-L 274
+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R
Sbjct: 258 IAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPE 317
Query: 275 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+
Sbjct: 318 LDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSE 377
Query: 335 LGPNVVRLLLLPNLGPYLSLLEPEML 360
LG V+++ ++P L +EP +L
Sbjct: 378 LGGEVIKVFIIPRLAFISERIEPHLL 403
>gi|149242252|ref|XP_001526435.1| hypothetical protein LELG_02993 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450558|gb|EDK44814.1| hypothetical protein LELG_02993 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 529
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 162/402 (40%), Positives = 228/402 (56%), Gaps = 62/402 (15%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ A S+GI N ++A LA DVEYRI EI++ AIK MRHS+R TL T D+D A
Sbjct: 14 PYDTVKDSADSMGI-NLPDESAKNLAMDVEYRIHEILELAIKFMRHSKRKTLMTTDIDYA 72
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ NVEP+YG+ + PL F+ + G + L+Y+DD +VEF+ +I LP+ P T+
Sbjct: 73 LKVLNVEPLYGYDNSQPLTFKETMVGAGGQTLYYIDDHEVEFEKLINQELPKIPRKTTFT 132
Query: 122 CHWLAIEGVQPVIPEN--------APVQAIAAPSNGTNNE-------------------- 153
HWLAIEGVQP++P+N P A S N+
Sbjct: 133 AHWLAIEGVQPMVPQNPLPSEIKNLPPAVRGATSTFLGNDVLALGVSNDGKDGGGSGGVG 192
Query: 154 ---------------QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLFKQ 196
++D E K VKH+LS+EL+LYFDK+ E+ VS L
Sbjct: 193 VSKKKAGTATSTSTTERD---FETKPLVKHVLSKELKLYFDKVVEVLVSSDPEKESLKNA 249
Query: 197 ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 256
AL SL +D GLH LVPYF FVA++++ L N +L ++ V+ L N I ++PY+H
Sbjct: 250 ALTSLKSDPGLHQLVPYFIQFVAEQITNQLRNIEILSTMLEVISALADNRTIFLDPYVHA 309
Query: 257 LMPSVVTCLVAKRLGNRLADNHWE----------LRDFTAKLVAAICKRYGHVYNTLQTR 306
LMP ++T L+AKR+G + DN E +R+F A L+ + K YG Y+TL+ R
Sbjct: 310 LMPCILTLLLAKRIGPVVKDNSPECEDTLRSQLAIREFAAILLEHVIKTYGSSYSTLRPR 369
Query: 307 LTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
+T+TLL ALLD + + HYGA+ GL LG V++L+L+ NL
Sbjct: 370 VTRTLLRALLDSTKPVGTHYGALLGLKNLGSEVLKLVLVGNL 411
>gi|740569|prf||2005369A transcription factor TFIID
Length = 592
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 226/386 (58%), Gaps = 28/386 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S + E+++VIA+SIG+ + S DAA LA DV +++ I+Q+A K M H++R L+ D+
Sbjct: 5 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDI 64
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D +LK+RNVEP YGF + + FR A G R+L + +DK+++ ++ + PLD ++
Sbjct: 65 DMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLDLTL 124
Query: 121 VCHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDG 157
HW +EGVQP +PEN P A P+ G ++ K+
Sbjct: 125 RSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKNV 184
Query: 158 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F
Sbjct: 185 ETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTF 243
Query: 218 VADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-L 274
+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R
Sbjct: 244 IAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPE 303
Query: 275 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+
Sbjct: 304 LDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSE 363
Query: 335 LGPNVVRLLLLPNLGPYLSLLEPEML 360
LG V+++ ++P + +EP +L
Sbjct: 364 LGGEVIKVFIIPRIKFISERIEPHLL 389
>gi|150864390|ref|XP_001383179.2| hypothetical protein PICST_87852 [Scheffersomyces stipitis CBS
6054]
gi|149385646|gb|ABN65150.2| TATA-binding protein-associated factor [Scheffersomyces stipitis
CBS 6054]
Length = 494
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 157/391 (40%), Positives = 225/391 (57%), Gaps = 48/391 (12%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ A+S+ I N +AA LA DVEYRI EI++ AIK MRHS+R L T D+ A
Sbjct: 16 PHDTVKDAAESLSI-NLPEEAAKNLAMDVEYRIHEILETAIKFMRHSKRKLLMTSDISNA 74
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ N+EP+YG+ + PL F+ A+ G + L+Y+DD ++E + +I LP+ P T+
Sbjct: 75 LKVLNIEPLYGYDNSQPLVFKEALVGAGGQTLYYIDDNEIELEKLINQELPKVPRQTTFT 134
Query: 122 CHWLAIEGVQPVIPEN-APVQAIAAP----------------SNGTNNEQKDGL------ 158
HWLAIEGVQP++ +N P + + P S G N E KD
Sbjct: 135 AHWLAIEGVQPMVAQNPLPAEIKSLPPIIRGATSSILGNDILSLGQNGENKDSAQGSAAT 194
Query: 159 --------PVEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLFKQALVSLATDSGLH 208
E+K VKH+LS+EL+LYFDK+ E+ +S L AL SL D GLH
Sbjct: 195 KDKKATEKQSEVKPLVKHVLSKELKLYFDKVVEVLISTDPEKENLKVAALNSLKNDPGLH 254
Query: 209 PLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 268
LVPYF FVA++++ L N +L ++ V+ L N I ++PY+H LMP ++T L+AK
Sbjct: 255 QLVPYFIQFVAEQITNQLRNIDILSTMLEVISALADNKTIFLDPYVHALMPCILTLLLAK 314
Query: 269 RLGNRLAD-----------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD 317
R+G + + +R+F A L+ I K YG Y+TL+ R+T+TLL ALLD
Sbjct: 315 RIGPVIRETSSKESQDTLKTQLAVREFAAFLLEHIIKVYGSSYSTLRPRVTRTLLRALLD 374
Query: 318 PKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
+ + HYGA+ GL +G VV+L+L+ NL
Sbjct: 375 STKPVGTHYGALLGLKNMGTEVVKLVLIGNL 405
>gi|195173306|ref|XP_002027433.1| GL20945 [Drosophila persimilis]
gi|194113285|gb|EDW35328.1| GL20945 [Drosophila persimilis]
Length = 555
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 223/386 (57%), Gaps = 28/386 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ E+++VIA+SIG+ S DAA L D+ +++ I+Q+A K H++R + D+
Sbjct: 19 SVYSAESIKVIAESIGVGTLSDDAAKELGEDISIKLKRIVQDAAKFSNHAKRQKILISDI 78
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D +LK+RNVEP YGF S + FR A G R+L + +DK+++ ++ + PLDT++
Sbjct: 79 DMSLKVRNVEPQYGFVSKDNIPFRFATGGGRELHFTEDKEIDLSEITANNAVKIPLDTTL 138
Query: 121 VCHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDG 157
HW +EG+QP +PEN P A P+ G ++ K+
Sbjct: 139 RSHWFVVEGIQPTVPENPPPLSKDSQFVDSVNPVIKLDQGLNKDAAGKPTTGKIHKLKNV 198
Query: 158 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F
Sbjct: 199 ETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTF 257
Query: 218 VADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-L 274
+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R
Sbjct: 258 IAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPE 317
Query: 275 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+
Sbjct: 318 LDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSE 377
Query: 335 LGPNVVRLLLLPNLGPYLSLLEPEML 360
LG V+++ ++P L +EP +L
Sbjct: 378 LGGEVIKVFIIPRLAFISERIEPHLL 403
>gi|195020556|ref|XP_001985217.1| GH16937 [Drosophila grimshawi]
gi|193898699|gb|EDV97565.1| GH16937 [Drosophila grimshawi]
Length = 613
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 227/395 (57%), Gaps = 28/395 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S + E+++VIA+SIG+ + S DA+ LA DV +++ + Q+A K M H+RR L+ D+
Sbjct: 19 SSISAESIKVIAESIGVGSLSDDASKELAEDVSIKLKRMAQDAAKFMHHARRQKLSVRDI 78
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D +LK+RN+EP YGF + + FR A G R+L + +DK+++ ++ + PLD ++
Sbjct: 79 DMSLKVRNIEPQYGFVTKDFIPFRFASGGGRELHFTEDKEIDLSEITANSSAKIPLDLTL 138
Query: 121 VCHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDG 157
HW +EG+QP +PEN P A P+ G ++ K+
Sbjct: 139 RSHWFVVEGIQPTVPENPPPLSKDSQFLDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKNV 198
Query: 158 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F
Sbjct: 199 ETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRAEALQSLGSDPGLHEMLPRMCTF 257
Query: 218 VADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-L 274
+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R
Sbjct: 258 IAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPE 317
Query: 275 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG+V GL+
Sbjct: 318 LDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSVAGLSE 377
Query: 335 LGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVK 369
LG V+++ ++P L +EP +L N K
Sbjct: 378 LGGEVIKVFIIPRLKFISERIEPHLLGTSMSNTDK 412
>gi|345485287|ref|XP_001599379.2| PREDICTED: transcription initiation factor TFIID subunit 6 [Nasonia
vitripennis]
Length = 663
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 220/370 (59%), Gaps = 29/370 (7%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++VIA+SIG+ N +AA LA DV YR++EI+Q+A K MR RR LTT D+D ALK
Sbjct: 15 ESMKVIAESIGVGNLPDEAAKDLAEDVSYRLKEIIQDATKFMRQGRRQKLTTHDIDHALK 74
Query: 67 LRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAP----LPRAPLDTSIV 121
+N+EP YGF + + FR A G R+L + ++K+++ ++I P+ PL+T++
Sbjct: 75 AKNIEPTYGFFAKEHIPFRFASGGGRELHFTEEKEIDLNEIISMAGGPNWPKLPLETNLR 134
Query: 122 CHWLAIEGVQPVIPENAP-----VQAIAA--PSNGTNNEQKDGLP------------VEI 162
HWL I+G+QP IPEN P VQ + + P + N+ G P V +
Sbjct: 135 SHWLCIDGIQPTIPENPPPVSKEVQKLESVDPISNRNSNSNLGKPGHKSHKLRNVETVHV 194
Query: 163 KLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEV 222
K H LS E QLY+ +ITE V SD +A SL+ D GLH ++ F+A+ V
Sbjct: 195 KQLATHELSVEQQLYYKEITEACVG-SDEAKRVEAFQSLSADPGLHEMLARMCTFIAEGV 253
Query: 223 SRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHW 279
+ NN ++L LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R DNHW
Sbjct: 254 RINVVQNNLAILIYLMRMVKALLDNPSLYLEKYLHELIPSVITCIVSKQLCARPEMDNHW 313
Query: 280 ELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA-LTQHYGAVQGLAALGPN 338
LRDF A+L+ ICK + N +QTR+T+ AL + + L YGA+ GL LGP
Sbjct: 314 ALRDFAARLIGQICKNFNTTTNNIQTRITRIFSQALANNNQTPLASLYGAIYGLCDLGPE 373
Query: 339 VVRLLLLPNL 348
V++ L++P +
Sbjct: 374 VIKALVIPKI 383
>gi|195128033|ref|XP_002008471.1| GI11798 [Drosophila mojavensis]
gi|193920080|gb|EDW18947.1| GI11798 [Drosophila mojavensis]
Length = 637
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 228/395 (57%), Gaps = 28/395 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S + E+++VIA+SIG+ + S DAA LA DV +++ I+Q+A K M H++R L+ D+
Sbjct: 19 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMHHAKRQKLSVKDI 78
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D +LK+RN+EP YGF + + FR A G R+L + +DK+++ ++ + PLD ++
Sbjct: 79 DMSLKVRNIEPQYGFMTKDFIPFRFASGGGRELHFTEDKEIDLNEITANSSFKIPLDLTL 138
Query: 121 VCHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDG 157
HW +EG+QP +PEN P A P+ G ++ K+
Sbjct: 139 RSHWFVVEGIQPTVPENPPPLSKDSQLVDSVNPVIKLDQGLNKDAAGKPTTGKIHKLKNV 198
Query: 158 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F
Sbjct: 199 ETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRAEALQSLGSDPGLHEMLPRMCTF 257
Query: 218 VADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-L 274
+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R
Sbjct: 258 IAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPE 317
Query: 275 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+
Sbjct: 318 LDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSE 377
Query: 335 LGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVK 369
LG V+++ ++P L +EP +L N K
Sbjct: 378 LGGEVIKVFIVPRLKFISERIEPHLLGTSMSNTDK 412
>gi|255732956|ref|XP_002551401.1| hypothetical protein CTRG_05699 [Candida tropicalis MYA-3404]
gi|240131142|gb|EER30703.1| hypothetical protein CTRG_05699 [Candida tropicalis MYA-3404]
Length = 507
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/427 (36%), Positives = 235/427 (55%), Gaps = 67/427 (15%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV A S+GI+ S + A +LA DVEY I EI++ A+K MRHS+R LTT D+ A
Sbjct: 14 PYDTVRDAADSLGIT-ISDETAKSLAMDVEYHIHEIIETAVKFMRHSKRRQLTTTDISYA 72
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ N+EP+YG+ + PL ++ + G + L+Y+DD ++EF+ +I LP+ P +
Sbjct: 73 LKILNIEPLYGYDNSQPLNYKETMVGAGGQTLYYIDDNEIEFEKLINQELPKVPRQVNFT 132
Query: 122 CHWLAIEGVQPVIPEN--------APVQAIAAPSN---------GTNNEQKDG------- 157
HWLA+EGVQP++P+N P A S G NN+ D
Sbjct: 133 AHWLAVEGVQPMVPQNPLPSEIKNLPAVVRGATSTMLGNDILSLGNNNKNDDSDSTSNGN 192
Query: 158 ---------------------LPVEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLF 194
+EIK +KH+LS+EL+LYFDK+ E+ +S L
Sbjct: 193 KKSGSGNGSSTTGNTTTTTTEKDLEIKPLIKHVLSKELKLYFDKVVEVLISTDPEKEHLK 252
Query: 195 KQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYL 254
AL SL D GLH LVPYF FVA++++ L N +L ++ V+ L N I ++PY+
Sbjct: 253 NAALTSLKNDPGLHQLVPYFIQFVAEQITNQLRNIEILSTMLEVISALADNKTIFLDPYV 312
Query: 255 HQLMPSVVTCLVAKRLG-----------NRLADNHWELRDFTAKLVAAICKRYGHVYNTL 303
H LMP ++T L+AKR+G + + +R+F A L+ I K YG Y+TL
Sbjct: 313 HALMPCILTLLLAKRIGPIIKNPQSEESKEILKSQLAVREFAAILLEHIIKVYGSSYSTL 372
Query: 304 QTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEK 363
+ R+T+TLL ALLD + + HYGA+ GL +G V++L+L+ NL + S ++E+
Sbjct: 373 RPRVTRTLLRALLDSTKPIGTHYGALLGLKNMGSEVLKLVLIGNLKVWYS-----SVIEE 427
Query: 364 QKNEVKR 370
KNE ++
Sbjct: 428 NKNEFEK 434
>gi|115910612|ref|XP_781123.2| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 238/394 (60%), Gaps = 39/394 (9%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
+E+++VI + +G+S+ + +A LA DV +R++ ++QEA K M+H++R L+T D D L
Sbjct: 14 QESIKVIGECVGVSSLNEEAGTLLADDVTFRLKMMVQEAAKFMKHAKRVKLSTADFDHTL 73
Query: 66 KLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+++N+E +YGF++ + FR A G R+L ++++K+++ D+I + +P+ PLD S+ HW
Sbjct: 74 RVQNIESLYGFSTEEHIPFRFASGGGRELHFVEEKELDLSDIINSSMPKIPLDVSLKAHW 133
Query: 125 LAIEGVQPVIPENAP-----------VQAIAAPSNGTNNEQKDGL--------------- 158
L+IEG QP IPEN P A+ E+K G
Sbjct: 134 LSIEGTQPAIPENPPPVDTHTQKVESQDALRTKKPTAKAEKKSGKGDMGKTAATLLAKAK 193
Query: 159 -----PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPY 213
PV++K + H LS E QLY+ +ITE V S++ +AL SLA+D GL+ +VP
Sbjct: 194 GLTSDPVKLKGVLVHELSVEQQLYYKEITEACVGSSETKR-AEALHSLASDPGLYQVVPR 252
Query: 214 FTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG 271
F+ F+A+ V + NN ++L LMR+V L+ N + +E YLH+L+P+V+TC+V+++L
Sbjct: 253 FSMFIAEGVKVNVVQNNLAILIYLMRMVKALMDNVTLYLEKYLHELIPAVMTCVVSRQLS 312
Query: 272 NRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQ 330
R ADNHW LRDF A+L+A++C+++ N +Q R++KT +L K L YGA+
Sbjct: 313 LRPDADNHWALRDFAARLMASMCRKFSTTTNNMQARISKTFDESLSKDKAPLATIYGALV 372
Query: 331 GLAALGPNVVRLLLLPN---LGPYLSLLEPEMLL 361
GLA LGP V++ L++P LG L ++ +++
Sbjct: 373 GLAELGPEVMKTLVIPKVRMLGERLRIMTESLII 406
>gi|195435680|ref|XP_002065807.1| GK19071 [Drosophila willistoni]
gi|194161892|gb|EDW76793.1| GK19071 [Drosophila willistoni]
Length = 631
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/385 (38%), Positives = 223/385 (57%), Gaps = 30/385 (7%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+ E+++VIA+SIG+ + S D A LA DV +++ I+Q+A K M H++R L+ D+D
Sbjct: 23 ISAESIKVIAESIGVGSLSDDGAKELAEDVSTKLKRIVQDAAKFMMHAKRHKLSVRDIDM 82
Query: 64 ALKLRNVEPVYGFASGG--PLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
ALK+RNVEP YGF + P RF G R+L + +DK+++ ++ + PLD ++
Sbjct: 83 ALKVRNVEPQYGFVAKDFVPFRFASG-GGRELHFTEDKEIDLSELTSNSSLKIPLDLTLR 141
Query: 122 CHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDGL 158
HW +EG+QP +PEN P A P+ G ++ K+
Sbjct: 142 SHWFVVEGIQPTVPENPPPLSKDSQFMDSVNPVIKLDQGLNKDAAGKPTTGKMHKLKNVE 201
Query: 159 PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV 218
+ +K H LS E QLY+ +ITE V SD +AL SL +D GLH ++P F+
Sbjct: 202 TIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTFI 260
Query: 219 ADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA- 275
A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+TC+V+K+L R
Sbjct: 261 AEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPEL 320
Query: 276 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 335
DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L+ YG++ GL+ L
Sbjct: 321 DNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSEL 380
Query: 336 GPNVVRLLLLPNLGPYLSLLEPEML 360
G V+++ ++P L +EP +L
Sbjct: 381 GGEVIKVFIIPRLKFISERIEPHLL 405
>gi|448104070|ref|XP_004200193.1| Piso0_002770 [Millerozyma farinosa CBS 7064]
gi|359381615|emb|CCE82074.1| Piso0_002770 [Millerozyma farinosa CBS 7064]
Length = 495
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 229/392 (58%), Gaps = 49/392 (12%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ A+S+GI+ +AA LA DVEYRI EI++ A+K MRHS+R L T D++ A
Sbjct: 16 PHDTVKDAAESLGIA-LPDEAAKNLAMDVEYRIHEILETAVKFMRHSKRRLLMTSDINHA 74
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
L++ N+EP+YG+ + L F+ + G + L+Y+DDK+++ + +I PLP P T+
Sbjct: 75 LEMLNIEPLYGYDNTQQLNFKETLVGAGGQTLYYIDDKEMDLEKLINQPLPTVPRQTTFT 134
Query: 122 CHWLAIEGVQPVIPEN---APVQAI------AAPSNGTNNEQKDGLP------------- 159
HWLA+EGVQP+IP+N + +++I A S N+ GL
Sbjct: 135 AHWLAVEGVQPMIPQNPLPSEIKSIPPFARGATSSTLGNDITSSGLSSDVTMKDRDDQSR 194
Query: 160 ----------VEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLFKQALVSLATDSGL 207
E+K VKH+LS+EL+LYFDK+ E+ ++ L AL SL D GL
Sbjct: 195 NKNTGLSQNASEVKPLVKHVLSKELKLYFDKVVEVLITTDPEKENLKYAALTSLKNDPGL 254
Query: 208 HPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVA 267
H LVPYF FVA++++ L N +L ++ V+ L N + ++PY+H LMP ++T L+A
Sbjct: 255 HQLVPYFIQFVAEQITNQLRNIEILTTMLEVISALADNKTLFLDPYVHTLMPCILTLLLA 314
Query: 268 KRLGNRLADNH-----------WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 316
KR+G DN+ +R+F A L+ I K YG Y+TL+ R+T+TLL ALL
Sbjct: 315 KRIGPASKDNNSSEAEDSLKKQLAVREFAAILLDHIIKVYGSSYSTLKARVTRTLLRALL 374
Query: 317 DPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
D + + HYG + GL +GP V++L+++ NL
Sbjct: 375 DYSKPVGTHYGTLLGLKNMGPEVIKLVVIGNL 406
>gi|327301659|ref|XP_003235522.1| transcription initiation factor TFIID complex subunit [Trichophyton
rubrum CBS 118892]
gi|326462874|gb|EGD88327.1| transcription initiation factor TFIID complex 60 kDa subunit
[Trichophyton rubrum CBS 118892]
Length = 431
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 238/423 (56%), Gaps = 44/423 (10%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI++ + D L+ DVEYRI ++++EA+K MRH +RT LTT D
Sbjct: 1 MSLWNPDNIRDVAESVGINSLNDDVVENLSRDVEYRISQVLEEALKFMRHGKRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
V AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+ +I APLP+ P +
Sbjct: 61 VSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEKLINAPLPKVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNE-----QKDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N A + + S G N V +K VKHIL
Sbjct: 121 SFTAHWLAVEGVQPTIPQNPTAADTRHLELVSKGPNANANLAAMSGNENVNVKPLVKHIL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S ELQLYF+++ + S+ A SL D GLH LVPYF F++++V+ + +
Sbjct: 181 SNELQLYFERVCNAFLDESNEEFRNSAFSSLKEDPGLHQLVPYFVQFISEKVTHNIKDIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVA 290
+L +M ++ L++NP + I+PYL +V H+ LRD ++ LV
Sbjct: 241 VLTQVMHMIEALIRNPTLYIDPYLGSSNDAV---------------EHFALRDLSSSLVG 285
Query: 291 AICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNLG 349
I K+Y +TL+ RL +T L LDP + HYGA+ GL ++ GPNV+R L++PNL
Sbjct: 286 MIAKKYSQSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIGGPNVIRELIIPNLP 345
Query: 350 PYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKT 409
Y +L+ + E +++ EA +V G ++ LS++ S+ T
Sbjct: 346 VYEVVLKDAVTDEG----LRKAEAEKVTGVIIAV--------------LSTIQDESLAHT 387
Query: 410 NGI 412
NG
Sbjct: 388 NGF 390
>gi|321468811|gb|EFX79794.1| hypothetical protein DAPPUDRAFT_244529 [Daphnia pulex]
Length = 476
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 222/370 (60%), Gaps = 26/370 (7%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P E+++++A+S+G++ S AA LA ++ +R++ I+Q+A K M H +R L+T DVD
Sbjct: 12 LPIESMKMMAESVGVAGLSDSAAKELADEINFRVKTIIQDATKFMHHGKRKKLSTMDVDH 71
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
ALK++N+EP+YGF++ + FR A G R+L +L+DK+++ D+I LP+ PLD S+
Sbjct: 72 ALKIKNIEPLYGFSNPDHIPFRFASGGGRELHFLEDKELDIADIIGGSLPKLPLDVSLRA 131
Query: 123 HWLAIEGVQPVIPENA--------------PVQAIAAPSNGTNN-------EQKDGLPVE 161
HWL+I+G+QP +PEN PV +A + T + V+
Sbjct: 132 HWLSIDGIQPAVPENPPSLSKDQQRLESSDPVSKLAKIGDKTKKASTLTAINKPKTETVQ 191
Query: 162 IKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADE 221
+K H LS E QLY+ +ITE V SD +A SLA+D GLH ++P F+A+
Sbjct: 192 VKQLTAHELSVEQQLYYKEITEACVG-SDEARRAEAFQSLASDPGLHQMLPRLCTFIAEG 250
Query: 222 VSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNH 278
V + NN + L LMR+V LL N + +E YLH+L+P+V +C+V+K+L R DNH
Sbjct: 251 VRVNVVQNNLAPLIYLMRMVKALLSNQTLYLEKYLHELVPAVTSCMVSKQLCLRPEVDNH 310
Query: 279 WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPN 338
W LRDF+++L+A ICK Y N QTR+T+ AL + K L YGA+ GL+ LG
Sbjct: 311 WALRDFSSRLIAQICKNYHTTTNNCQTRVTRLFCRALANDKMPLASFYGALVGLSELGTE 370
Query: 339 VVRLLLLPNL 348
V++ ++P +
Sbjct: 371 VIKAFIIPKI 380
>gi|391340028|ref|XP_003744348.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Metaseiulus occidentalis]
Length = 582
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 214/363 (58%), Gaps = 26/363 (7%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+V+++A+SIG++ D ++ DV YR+R I+QEA+K RH +R L T D+D AL+
Sbjct: 21 ESVKMMAESIGVTALPEDTCREISEDVTYRLRVILQEAVKFTRHGKRKKLLTSDLDSALR 80
Query: 67 LRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
++NVEP+YGF + FR A G R+L++ ++K+++ +++ PLP+ PLD SI HWL
Sbjct: 81 VKNVEPLYGFTDPHFIPFRFASGGGRELYFHEEKEIDLNELVTLPLPKLPLDVSIKAHWL 140
Query: 126 AIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLP-----------------VEIKLPVKH 168
+IEG QP +PEN P P + E D L V +K H
Sbjct: 141 SIEGTQPTVPENPP----PVPKDQQKQESLDPLSKMCKPQQAERTAKHVETVRVKQLATH 196
Query: 169 ILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL-- 226
LS E QLY+ +ITE V DS +AL SL++D GLH ++P F+++ V +
Sbjct: 197 ELSVEQQLYYKEITEACVGSDDS-RRAEALQSLSSDPGLHQMLPRLCTFISEGVKVNVVQ 255
Query: 227 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFT 285
NN + L L+R+V LL N + +E YLH+L+PSV TC+V+++L R DNHW LRDF
Sbjct: 256 NNLAFLIYLIRMVKALLDNQSLYLEKYLHELIPSVATCIVSRQLCTRPEVDNHWALRDFA 315
Query: 286 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 345
++L++ ICK + N +QTR+T+ N L + + L YGAV + LG VVR LL+
Sbjct: 316 SRLMSQICKNFNTSTNGIQTRVTRIFSNTLSNDRMPLASTYGAVSAIGELGTEVVRSLLI 375
Query: 346 PNL 348
P +
Sbjct: 376 PRI 378
>gi|366993030|ref|XP_003676280.1| hypothetical protein NCAS_0D03380 [Naumovozyma castellii CBS 4309]
gi|342302146|emb|CCC69919.1| hypothetical protein NCAS_0D03380 [Naumovozyma castellii CBS 4309]
Length = 516
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 228/397 (57%), Gaps = 57/397 (14%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +A
Sbjct: 13 PQDTVKDVADSLGLENINEDVLKALAMDVEYRILEIIEQAVKFKRHSKREILTTDDVAKA 72
Query: 65 LKLRNVEPVYGFASGG----PLRFRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G + F + G + ++YL++++++F +I PLP+ P
Sbjct: 73 LRILNVEPLYGYHDGSAENKSVSFAKVNTSGGQSVYYLNEEEIDFDKLINEPLPQVPRIP 132
Query: 119 SIVCHWLAIEGVQPVIPEN----------------APVQAIAAPSNGT------------ 150
+ HWLA+EG+QP I EN A V A+ S T
Sbjct: 133 TFTAHWLAVEGIQPAIVENPNLNDVRISQPPIIRGAIVTALNDASIQTSSSAAISSRISL 192
Query: 151 ----NNEQ----KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV----LFKQAL 198
N EQ K G E+K VKH+LS+ELQ+YF+K+ +++ D+ + AL
Sbjct: 193 NEAKNGEQFSMVKPGQNTEVKPLVKHVLSKELQIYFNKVIAALITKEDTEDAQRMKTAAL 252
Query: 199 VSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLM 258
SL TDSGLH LVPYF F+A++++ L+N LL ++ ++++LL NP I ++PY+H LM
Sbjct: 253 TSLKTDSGLHQLVPYFIQFIAEQITHNLSNLELLTTILEMIYSLLSNPSIFLDPYIHSLM 312
Query: 259 PSVVTCLVAKRLG-----------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRL 307
PS++T L+AK+LG + + LRDF A L+ + K++ +Y +L+ R+
Sbjct: 313 PSILTLLLAKKLGGAPTQDTPEEMHEFLEKTNALRDFAASLLEYVLKKFPQIYKSLKPRI 372
Query: 308 TKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
T+TLL LD R +YG ++G++ L +R L
Sbjct: 373 TRTLLKTFLDTNRVFGTYYGCLKGISVLESESIRFFL 409
>gi|307198511|gb|EFN79416.1| Transcription initiation factor TFIID subunit 6 [Harpegnathos
saltator]
Length = 640
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 149/380 (39%), Positives = 229/380 (60%), Gaps = 34/380 (8%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+ + +E+V+VIA+SIG+ NF +AA LA DV YR++EI+Q+A K MRH +R +T D+
Sbjct: 10 TTLSQESVKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIVQDAAKFMRHGKRKRMTAYDI 69
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEA----PLPRAPL 116
D ALK+RN+EP YGF S + FR A G R+L ++++K+++ +V+ P+ PL
Sbjct: 70 DHALKVRNIEPTYGFYSKDHIPFRFASGGGRELHFVEEKEIDLNEVVSTTGGQTWPKLPL 129
Query: 117 DTSIVCHWLAIEGVQPVIPENAP-----VQAIAA--PSNGTNNEQKDGL----------- 158
+ ++ HWL+I+GVQP IPEN P VQ + + P+ +N+ ++
Sbjct: 130 EITLRSHWLSIDGVQPTIPENPPPVSKDVQKLESVDPTIKLSNKNQNIGIGKPGGGGKSQ 189
Query: 159 ------PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVP 212
V +K H LS E QLY+ +ITE V SD +AL SL+ D GLH ++
Sbjct: 190 KLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEALQSLSADPGLHEMLA 248
Query: 213 YFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 270
F+A+ V + N+ +LL LMR+V LL+NP + +E YLH+L+PSV TC+V+++L
Sbjct: 249 RMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLENPSLYLEKYLHELIPSVATCIVSRQL 308
Query: 271 GNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA-LTQHYGA 328
+ DNHW LRDF ++L++ ICK + N +QTR+T+ AL + L YGA
Sbjct: 309 CMKPEVDNHWALRDFASRLMSQICKNFNTSTNNVQTRVTRMFSQALAKNNQIPLASLYGA 368
Query: 329 VQGLAALGPNVVRLLLLPNL 348
++GL LGP V++ L++P +
Sbjct: 369 IEGLCELGPEVIKSLVIPKI 388
>gi|67902490|ref|XP_681501.1| hypothetical protein AN8232.2 [Aspergillus nidulans FGSC A4]
gi|40739698|gb|EAA58888.1| hypothetical protein AN8232.2 [Aspergillus nidulans FGSC A4]
gi|259481015|tpe|CBF74165.1| TPA: transcription initiation factor TFIID complex 60 kDa subunit
(AFU_orthologue; AFUA_5G03680) [Aspergillus nidulans
FGSC A4]
Length = 445
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 238/394 (60%), Gaps = 18/394 (4%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI N + D LA DVEYRI ++++EA+K MRHSRRT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGIVNLNNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+ AL++ +VEP+YG+ + PL+F A +G + LFY++D++V+F+ +I APLPR P +
Sbjct: 61 IALALRVLDVEPLYGYETTRPLKFGEASLGPGQPLFYVEDEEVDFEKLINAPLPRVPREI 120
Query: 119 SIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQKDGLPVEIKLPVKHIL 170
S HWLA+EGVQP IP+N + + +N T V +K VKH+L
Sbjct: 121 SFTAHWLAVEGVQPSIPQNPTAADSRNLELMSKGPNANATLAAMSGNGNVAVKPLVKHVL 180
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S+ELQLYF+K+ + S SL D GLH LVPYF F++++V+ GL +
Sbjct: 181 SKELQLYFEKVCNAFLDESSEKYRTSGYASLREDPGLHQLVPYFVQFISEKVTHGLKDIF 240
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD--NHWELRDFTAKL 288
+L +M + L+QN + ++PY+ L+P ++TCL+ ++LG AD + LRD A L
Sbjct: 241 VLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGT-ADLSEQFALRDLAAAL 299
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPN-VVRLLLLPN 347
+ I +Y H +TL+ RL ++ L LLDP + HYGA+ GL A+G + VR+L++PN
Sbjct: 300 LGLIATKYSHSSHTLKPRLARSCLKTLLDPSKPFGAHYGAIIGLHAVGGSEAVRVLIIPN 359
Query: 348 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 381
L Y +LL+ + + +R EA +V G LL
Sbjct: 360 LPIYGNLLKDGL----ADDSARRPEAEKVLGLLL 389
>gi|154308898|ref|XP_001553784.1| hypothetical protein BC1G_07977 [Botryotinia fuckeliana B05.10]
gi|347838599|emb|CCD53171.1| similar to transcription initiation factor TFIID complex subunit
[Botryotinia fuckeliana]
Length = 472
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 223/364 (61%), Gaps = 20/364 (5%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V +A+S+GIS +A AL+ +VEYR+ +++ EA++ M +RT L T D+ +ALK
Sbjct: 11 DNVRDVAESVGISQLGEEAVRALSQEVEYRVGQVIVEAMRFMHQGKRTVLGTQDISQALK 70
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLRF A +G + LFY++D++V+F+ +I APLP+ P D S HW
Sbjct: 71 VLDVEPLYGYESTRPLRFGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMSFTAHW 130
Query: 125 LAIEGVQPVIPENAPVQAIA-----APSNGTNNEQKDGLP----VEIKLPVKHILSRELQ 175
LA+EGVQP IP+N P A A P N L V +K VKHI+S+EL
Sbjct: 131 LAVEGVQPSIPQN-PTTAEARANDLVPKGPGANPNLGALAGNDNVTVKPLVKHIVSKELI 189
Query: 176 LYFDKITELAVSRSDS----VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 231
L+FDKI E + D L + AL S+ TD+GL LVPYF +F+A++V+ L+N +
Sbjct: 190 LFFDKIREAILDDDDDPEVVTLREAALKSVETDTGLQQLVPYFVHFIAEKVTHSLSNLFV 249
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD---NHWELRDFTAKL 288
L ++++ L+ N + +EPY+ L P ++TCLV ++LG + ++LRD A L
Sbjct: 250 LQTMLKLAHVLVSNKKLFVEPYISSLCPPILTCLVGRKLGTGAPEELKEKYQLRDTAASL 309
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPN 347
+ I K+Y L+ RL ++ L LDP R+ ++YGA+ GL A+ GP+ VR L+LPN
Sbjct: 310 IGIISKKYTESNAQLRARLARSCLKFFLDPTRSPGEYYGAISGLLAIGGPDGVRALILPN 369
Query: 348 LGPY 351
LG +
Sbjct: 370 LGAF 373
>gi|301790895|ref|XP_002930451.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
isoform 2 [Ailuropoda melanoleuca]
Length = 668
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 227/386 (58%), Gaps = 50/386 (12%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L + +A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDE----------DALKFMHMGKRQKLTTSDI 61
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 62 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 121
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AAP++G
Sbjct: 122 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPADGK 181
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 182 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 240
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 241 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 300
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 301 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 360
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 361 TTRYGSIAGLAELGHDVIKTLILPRL 386
>gi|391340118|ref|XP_003744392.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Metaseiulus occidentalis]
Length = 482
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 220/359 (61%), Gaps = 18/359 (5%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+V ++A+SIG++ S + ++ DV YR+R I+QEA K + H +R L D+D AL+
Sbjct: 14 ESVRIMAESIGVTALSQETYQEVSEDVIYRLRVILQEASKFVSHGKRRKLLASDLDSALR 73
Query: 67 LRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
++NVEP+YGF+ + FR A G R++++ +DK+++ ++ APLP+ PLD SI HWL
Sbjct: 74 MKNVEPLYGFSDPHFIPFRFASGGGREVYFREDKEIDLCQLMSAPLPKLPLDISIKAHWL 133
Query: 126 AIEGVQPVIPENAPVQAIAAPSNGT-------NNEQKDGLP------VEIKLPVKHILSR 172
AIEG+QP +PEN P++ G+ ++ G P V +K H LS
Sbjct: 134 AIEGIQPTVPENPPLEPRNQQKQGSLDPFSIMQEARQSGKPPRHFETVCVKQLATHELSV 193
Query: 173 ELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYS 230
E QLY+ +I+E V DS +ALVSL++D+GLH ++P F+++ V + NN +
Sbjct: 194 EQQLYYKEISEACVGSDDS-RRAEALVSLSSDTGLHQMLPRLCTFISEGVKLNVVQNNLA 252
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLV 289
L L+R++ LL N ++ +E YLH+L+P+V TC+V+K+L R DNHW LRDF ++L+
Sbjct: 253 FLIYLIRMIKALLDNQNLYLEKYLHELIPAVATCIVSKQLCMRPEVDNHWALRDFASRLM 312
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
+ IC+ Y N +QTR+T+ L L + LT YGAV + LG VVR LL+P +
Sbjct: 313 SQICRNYNTSTNGIQTRITRILSKVLSNDHMPLTAMYGAVSAVGELGSEVVRSLLIPRV 371
>gi|448520733|ref|XP_003868350.1| Taf60 TFIID and SAGA complex subunit [Candida orthopsilosis Co
90-125]
gi|380352690|emb|CCG25446.1| Taf60 TFIID and SAGA complex subunit [Candida orthopsilosis]
Length = 496
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 221/392 (56%), Gaps = 49/392 (12%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ A S+GI N +AA +A DVEYRI EI++ AIK MRHS+R L T D+D A
Sbjct: 14 PYDTVKDSADSLGI-NLPDEAAKNIAMDVEYRIHEILELAIKFMRHSKRKMLMTSDIDYA 72
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ NVEP+YG+ + PL F+ + G + L+Y+DD+++EF+ +I LP+ P +
Sbjct: 73 LKILNVEPLYGYDNSQPLNFKETMVGAGGQTLYYVDDQEIEFEKLINQELPQVPRRCNFT 132
Query: 122 CHWLAIEGVQPVIPEN---------------------------------APVQAIAAPSN 148
HWLAIEGVQP++P+N V +
Sbjct: 133 AHWLAIEGVQPMVPQNPLPSDIKNLPPAIRGATSSYLGNDILTWGSNSATGVDGQDGAED 192
Query: 149 GTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLFKQALVSLATDSG 206
G N+ + K VKH+LS+EL+LYFDK+ E+ +S L AL SL +D G
Sbjct: 193 GAKNKNPTDKEFDTKPLVKHVLSKELKLYFDKVVEVLISTDPEKESLKNAALTSLKSDPG 252
Query: 207 LHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLV 266
LH LVPYF FVA++++ L N +L ++ V+ L N I ++PY+H LMP V+T L+
Sbjct: 253 LHQLVPYFIQFVAEQITNELRNIEILSTMLEVISALADNKTIFLDPYVHALMPCVLTLLL 312
Query: 267 AKRLGNRLAD----------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 316
AKR+G + D N +R+F A L+ I K +G Y+TL+ R+T+TLL ALL
Sbjct: 313 AKRIGPIVKDSTENYQETLRNQLAVREFAAILLEHIIKVHGSSYSTLRPRVTRTLLRALL 372
Query: 317 DPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
D + + YGA+ GL G V++L+L+ NL
Sbjct: 373 DSTKPVGTQYGALLGLKNFGNEVLKLVLVGNL 404
>gi|440632593|gb|ELR02512.1| hypothetical protein GMDG_01038 [Geomyces destructans 20631-21]
Length = 453
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 219/368 (59%), Gaps = 20/368 (5%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V +A+S+GIS +A AL+ +VEYR+ +++ EA + M+ +RT L T D+ +ALK
Sbjct: 11 DNVRDVAESVGISQLGEEAVRALSQEVEYRVGQVIVEATRFMQQGKRTVLGTQDISQALK 70
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLRF A +G + LFY++D++V+F+ +I APLP+ P D S HW
Sbjct: 71 VLDVEPLYGYESTRPLRFGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDISFTAHW 130
Query: 125 LAIEGVQPVIPENAPVQAIA-----APSNGTNNEQKDGLP----VEIKLPVKHILSRELQ 175
LA+EGVQP IP+N P A A P N L V K VKHILS+EL
Sbjct: 131 LAVEGVQPSIPQN-PTTAEARTQELVPKGANANPTLTALTGNDNVGFKPQVKHILSKELM 189
Query: 176 LYFDKITE--LAVSRSDSV--LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 231
LYF+KI L D V L AL S+ D L LVPYF F+A++V+ N +
Sbjct: 190 LYFEKIRTAILDTDPDDDVVRLRVAALASVENDESLQQLVPYFVQFIAEKVTHNTKNIFV 249
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL---ADNHWELRDFTAKL 288
L +M + L +N + I+PY L SV+TCLV + L N +H++LR+F+A L
Sbjct: 250 LQTMMELASALTRNERLFIDPYTTTLCSSVLTCLVGRGLTNATPVEVKDHYKLREFSASL 309
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPN 347
+ I K+Y L+ RL +T+L L+PK+ L QHYGA+ GL A+ GP VR+L++PN
Sbjct: 310 LGHIAKKYAKSSQQLKPRLARTVLKYFLNPKKPLDQHYGAISGLVAVGGPESVRMLIIPN 369
Query: 348 LGPYLSLL 355
L Y S+L
Sbjct: 370 LKAYNSVL 377
>gi|449017070|dbj|BAM80472.1| TATA-box binding protein-associated factor 6 [Cyanidioschyzon
merolae strain 10D]
Length = 459
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 231/423 (54%), Gaps = 44/423 (10%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+ TV VIA ++GI+ D A LA D EYR+REI+QEA K MRHS+R L T D+
Sbjct: 19 IRSSTVHVIAATVGIARLREDVAAYLATDAEYRLREIIQEAGKFMRHSKRRRLKTSDIAA 78
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAI--------GYRDLFYLDDKDVEFKDVIEAPLPRAP 115
AL+LRN+EP+YGF+S F G ++++ D++V+ +D+++ LPR P
Sbjct: 79 ALRLRNLEPLYGFSSNESAPFVGVTLPGESSLGGSNTVYFVGDEEVDLRDILDGELPRVP 138
Query: 116 LDTSIVCHWLAIEGVQPVIPEN-APVQAIAAPS---------------NGTNNEQKDGLP 159
L+T++ HWLAIEG+QP IP+N A V + A S N ++ D
Sbjct: 139 LETTLALHWLAIEGIQPRIPQNPADVSSTARQSLTYILRDTVHDEPGRNASDTPDTDTGM 198
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRS----DSVLFKQALVSLATDSGLHPLVPYFT 215
V + V+H++SRELQLY++ E A++RS D L L S+A D GL LVPYF
Sbjct: 199 VSFRPKVRHVVSRELQLYYELAIE-ALTRSAQETDETLRNACLASIARDPGLQQLVPYFV 257
Query: 216 YFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA 275
F+ VS + L M++ LL+N ++ +EPYLHQLMPS++TC+V + L
Sbjct: 258 AFLFHHVSNHCRDLPQLQVSMKLARALLENRYVGLEPYLHQLMPSIITCIVGRYLCRTAD 317
Query: 276 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 335
++HW LR+ A L+A + K YG Y L R+ +TL AL+ +ALT YGA+ L
Sbjct: 318 EDHWTLRENAASLLADVHKMYGGTYENLLPRIAETLRLALVGEDKALTTQYGAIVAFQEL 377
Query: 336 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEV-------------KRHEAWRVYGALLQ 382
GP +V ++P L P L L E +E + E K E RVY AL +
Sbjct: 378 GPALVEAHIVP-LAPNL-LERWERKIEHELGEAPIKSAELELATSPKWSELRRVYAALAK 435
Query: 383 AAG 385
A G
Sbjct: 436 ALG 438
>gi|380018610|ref|XP_003693220.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Apis florea]
Length = 630
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/381 (38%), Positives = 227/381 (59%), Gaps = 35/381 (9%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQ-EAIKCMRHSRRTTLTTDD 60
+ + +E+++VIA+SIG+ NF +AA LA DV YR++E+ + +A K MRH +R +TT D
Sbjct: 10 TTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKELFRFDAAKFMRHGKRQRMTTHD 69
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIE----APLPRAP 115
+D ALK++N+EP YGF + + FR A G R+L ++++K+++ +VI P+ P
Sbjct: 70 IDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEVISMSGGQTWPKLP 129
Query: 116 LDTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQ------------- 154
L+ ++ HWL I+GVQP IPEN P ++++ S TN Q
Sbjct: 130 LEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESVDPTSKLTNKSQNIGVGKPGGGGKS 189
Query: 155 ---KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLV 211
++ V +K H LS E QLY+ +ITE V SD +AL SL+ D GLH ++
Sbjct: 190 QKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEALQSLSADPGLHEML 248
Query: 212 PYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKR 269
F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PS+ TC+V+++
Sbjct: 249 ARMCTFIAEGVRVNVVQNNLALLIYLMRMVKALLDNPSLYLEKYLHELIPSIATCIVSRQ 308
Query: 270 LGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL-DPKRALTQHYG 327
L R DNHW LRDF ++L+A ICK + N +QTR+T+ AL + + L YG
Sbjct: 309 LCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQALAKNSQTPLASLYG 368
Query: 328 AVQGLAALGPNVVRLLLLPNL 348
A++GL LGP V++ L++P +
Sbjct: 369 AIEGLCELGPEVIKALVIPKI 389
>gi|307185548|gb|EFN71510.1| Transcription initiation factor TFIID subunit 6 [Camponotus
floridanus]
Length = 636
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/380 (38%), Positives = 228/380 (60%), Gaps = 34/380 (8%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+ + +E+++VIA+SIG+ NF +AA LA DV YR++EI+Q+A K MRH +R +TT D+
Sbjct: 10 TTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIIQDAAKFMRHGKRQRMTTHDI 69
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIE----APLPRAPL 116
D ALK++N+EP YGF + + FR A G R+L ++++K+++ +++ P+ PL
Sbjct: 70 DHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEIVSMAGGQTWPKLPL 129
Query: 117 DTSIVCHWLAIEGVQPVIPENAP-----VQAIAA--PSNGTNNEQKDGL----------- 158
+ ++ HWL I+GVQP +PEN P VQ + + P+ +++ ++
Sbjct: 130 EITLRAHWLCIDGVQPTVPENPPPVSKDVQKLESVDPTTKLSSKNQNIGIGKPGGGGKSQ 189
Query: 159 ------PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVP 212
+ +K H LS E QLY+ +ITE V SD +AL SL+ D GLH ++
Sbjct: 190 KLRNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEGRRAEALQSLSADPGLHEMLA 248
Query: 213 YFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 270
F+A+ V + N+ +LL LMR+V LL NP + +E YLH+L+PSV TC+V+++L
Sbjct: 249 RMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLHELIPSVATCIVSRQL 308
Query: 271 GNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA-LTQHYGA 328
R DNHW LRDF ++L+A ICK + N +QTR+T+ AL + L YGA
Sbjct: 309 CMRPDVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQALAKNNQTPLASLYGA 368
Query: 329 VQGLAALGPNVVRLLLLPNL 348
++GL LGP V++ L++P +
Sbjct: 369 IEGLCELGPEVIKALVIPKI 388
>gi|68479895|ref|XP_716115.1| hypothetical protein CaO19.7454 [Candida albicans SC5314]
gi|46437770|gb|EAK97111.1| hypothetical protein CaO19.7454 [Candida albicans SC5314]
gi|238881059|gb|EEQ44697.1| hypothetical protein CAWG_02975 [Candida albicans WO-1]
Length = 519
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 239/433 (55%), Gaps = 72/433 (16%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV A S+G++ S + A +LA DVEY I EI++ A+K MRHS+R LTT DV A
Sbjct: 14 PYDTVRDAADSLGVT-ISDETAKSLAMDVEYHIHEIIETAVKFMRHSKRRQLTTSDVSNA 72
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ N+EP+YG+ + PL ++ + G + L+Y+D+ ++EF+ +I LP+ P +
Sbjct: 73 LKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFEKLINQQLPKVPRQVNFT 132
Query: 122 CHWLAIEGVQPVIPEN---APVQAIAAPSNGT-----------------NNEQKDGLP-- 159
HWLAIEGVQP++P+N + ++++ A G N E D
Sbjct: 133 AHWLAIEGVQPMVPQNPLPSEIKSLPAAVRGATTSMLGNDILSLGSKNENGESNDSTKHE 192
Query: 160 --------------------------VEIKLPVKHILSRELQLYFDKITELAVSR--SDS 191
+EIK +KH+LS+EL+LYFDK+ ++ +S
Sbjct: 193 SELLSNGGSSSHTNNSNSNKKSTEKDMEIKPLIKHVLSKELKLYFDKVVDVLISTDPEKE 252
Query: 192 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIE 251
L AL SL +D GLH LVPYF F+A++++ L N +L ++ V+ L+ N I ++
Sbjct: 253 HLKNAALTSLKSDPGLHQLVPYFIQFIAEQITNQLRNIEILSTMLEVISALVDNKTIFLD 312
Query: 252 PYLHQLMPSVVTCLVAKRLG-----NRLADNHWE--------LRDFTAKLVAAICKRYGH 298
PY+H LMP ++T L+AKR+G + W+ +R+F A L+ I K YG
Sbjct: 313 PYVHALMPCILTLLLAKRIGPVIKLTQENKEEWQDALKSQLAIREFAAILLQHIIKVYGS 372
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
Y+TL+ R+T+TLL ALLD + + YGA+ GL +G V++L+LL NL + S
Sbjct: 373 SYSTLRPRITRTLLRALLDSTKPVGTQYGALLGLKNMGNEVLKLVLLGNLKVWYS----- 427
Query: 359 MLLEKQKNEVKRH 371
++EK +N+ +R
Sbjct: 428 AIIEKNENDYERQ 440
>gi|363749243|ref|XP_003644839.1| hypothetical protein Ecym_2276 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888472|gb|AET38022.1| Hypothetical protein Ecym_2276 [Eremothecium cymbalariae
DBVPG#7215]
Length = 504
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 224/387 (57%), Gaps = 48/387 (12%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV +A+S+GI+N S D +LA DVEYRI EI+++A+K RHS+R LTTDD+ A
Sbjct: 18 PQDTVRDVAESLGITNVSDDVLRSLAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDIARA 77
Query: 65 LKLRNVEPVYGFASGGP----LRFRRAIGY--RDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ + F + G + ++YLDD++++F +I PLP P
Sbjct: 78 LRVLNVEPLYGYEDNSTRDKEVSFSKVTGQGGQTMYYLDDEEIDFDKLINEPLPHVPRLP 137
Query: 119 SIVCHWLAIEGVQPVIPENAPVQ------------AIAAPSNGTN-------------NE 153
+ HWLA+EGVQP IP+N + AI N T+ ++
Sbjct: 138 TFTTHWLAVEGVQPAIPQNPNLNDLRMTQLPLTRGAIVTALNDTSIQTSVSEEKSEHVSQ 197
Query: 154 QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ-----ALVSLATDSGLH 208
K G E K VKH+LS+ELQ+YF+K+ A++ D L Q AL SL +D+GLH
Sbjct: 198 VKPGQTNETKPLVKHVLSKELQIYFNKVVS-ALTSKDQNLNAQHMKAAALTSLKSDTGLH 256
Query: 209 PLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 268
L+PYF F+A++++ L++ LL ++ ++++LL + ++PY+H LMPS++T L+AK
Sbjct: 257 QLIPYFIQFIAEQITHNLSDLDLLTTMLEMIYSLLSKQSVFLDPYIHSLMPSILTLLLAK 316
Query: 269 RLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD 317
+LG + E LRDF + L+ + +++ VY +L+ R+T+TLL LD
Sbjct: 317 KLGGAPSSTSSEDEQDFLEKTNALRDFASTLLDHVLQKFPQVYKSLKPRVTRTLLKTFLD 376
Query: 318 PKRALTQHYGAVQGLAALGPNVVRLLL 344
R+ +YG ++G+ LG +R L
Sbjct: 377 SNRSFGTYYGCIRGVCVLGNETIRFFL 403
>gi|374108757|gb|AEY97663.1| FAFL020Wp [Ashbya gossypii FDAG1]
Length = 504
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 226/387 (58%), Gaps = 48/387 (12%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV +A S+GI+N + D +LA DVEYRI EI+++A+K RHS+R LTTDD+ A
Sbjct: 18 PQDTVRDVADSLGINNVNDDVLRSLAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDIARA 77
Query: 65 LKLRNVEPVYGFASGGP----LRFRRAIGY--RDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ + + + G + ++Y++D++V+F +I PLP P
Sbjct: 78 LRVLNVEPLYGYEDNSTRDKEVSYSKVTGQGGQTMYYVNDEEVDFDKLINEPLPHVPRLP 137
Query: 119 SIVCHWLAIEGVQPVIPENAPVQ------------AIAAPSNGTN-------------NE 153
+ HWLA+EGVQP IP+N + AI N T+ ++
Sbjct: 138 TFTTHWLAVEGVQPAIPQNPNLNELRMTQLPLTRGAIVTALNDTSIQTSVSEEKAEHVSQ 197
Query: 154 QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ-----ALVSLATDSGLH 208
K G E+K VKH+LS+ELQ+YFDK+ A++ D L Q AL SL +D+GLH
Sbjct: 198 VKPGQTNEVKPLVKHVLSKELQIYFDKVVG-ALTSKDQTLNAQHMKVAALTSLKSDTGLH 256
Query: 209 PLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 268
LVPYF F+A++++ L++ LL ++ ++++LL N + ++PY+H LMPS++T L+AK
Sbjct: 257 QLVPYFIQFIAEQITHNLSDLDLLTTMLEMIYSLLSNQSVFLDPYIHSLMPSILTLLLAK 316
Query: 269 RLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD 317
+LG + E LRDF++ L+ + +++ VY +L+ R+T+TLL LD
Sbjct: 317 KLGGSPSSTSPEDEQDFLEKTIALRDFSSTLLDHVLQKFPQVYKSLKPRVTRTLLKTFLD 376
Query: 318 PKRALTQHYGAVQGLAALGPNVVRLLL 344
R+ +YG ++G+ LG +R L
Sbjct: 377 SNRSFGTYYGCIRGVCILGNETIRFFL 403
>gi|448100373|ref|XP_004199334.1| Piso0_002770 [Millerozyma farinosa CBS 7064]
gi|359380756|emb|CCE82997.1| Piso0_002770 [Millerozyma farinosa CBS 7064]
Length = 495
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 149/392 (38%), Positives = 227/392 (57%), Gaps = 49/392 (12%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ A+S+G++ +AA LA DVEYRI EI++ A+K MRHS+R L T D++ A
Sbjct: 16 PHDTVKDAAESLGVT-LPDEAAKNLAMDVEYRIHEILETAVKFMRHSKRRLLMTSDINHA 74
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
L++ N+EP+YG+ + L F+ + G + L+Y+DDK+++ + +I PLP P T+
Sbjct: 75 LEMLNIEPLYGYDNTQQLNFKETLVGAGGQTLYYIDDKEMDLEKLINQPLPTVPRQTTFT 134
Query: 122 CHWLAIEGVQPVIPEN---APVQAI------AAPSNGTNNEQKDGLP------------- 159
HWLA+EGVQP+IP+N + +++I A S N+ GL
Sbjct: 135 AHWLAVEGVQPMIPQNPLPSEIKSIPPFARGATSSTLGNDITNSGLSSDVTIKDRDDQSR 194
Query: 160 ----------VEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLFKQALVSLATDSGL 207
E+K VKH+LS+EL+LYFDK+ E+ +S L AL SL D GL
Sbjct: 195 NKNSSLSQNASEVKPLVKHVLSKELKLYFDKVVEVLISTDPEKENLKYAALTSLKNDPGL 254
Query: 208 HPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVA 267
H LVPYF FVA++++ L N +L ++ V+ L N + ++PY+H LMP ++T +A
Sbjct: 255 HQLVPYFIQFVAEQITNQLRNIEILTTMLEVISALADNKTLFLDPYVHTLMPCILTLQLA 314
Query: 268 KRLGNRLADN-----------HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 316
KR+G D+ +R+F A L+ I K YG Y+TL+ R+T+TLL ALL
Sbjct: 315 KRIGPTSKDDESSEAEDSLKKQLAVREFAAILLDHIIKVYGSSYSTLKARVTRTLLRALL 374
Query: 317 DPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
D + + HYG + GL +GP V++L+++ NL
Sbjct: 375 DYSKPVGTHYGTLLGLKNMGPEVIKLVVIGNL 406
>gi|45198499|ref|NP_985528.1| AFL020Wp [Ashbya gossypii ATCC 10895]
gi|44984450|gb|AAS53352.1| AFL020Wp [Ashbya gossypii ATCC 10895]
Length = 504
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 225/387 (58%), Gaps = 48/387 (12%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV +A S+GI+N + D +LA DVEYRI EI+++A+K RHS+R LTTDD+ A
Sbjct: 18 PQDTVRDVADSLGINNVNDDVLRSLAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDIARA 77
Query: 65 LKLRNVEPVYGFASGGP----LRFRRAIGY--RDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ + + + G + ++Y++D++V+F +I PLP P
Sbjct: 78 LRVLNVEPLYGYEDNSTRDKEVSYSKVTGQGGQTMYYVNDEEVDFDKLINEPLPHVPRLP 137
Query: 119 SIVCHWLAIEGVQPVIPENAPVQ------------AIAAPSNGTN-------------NE 153
+ HWLA+EGVQP IP+N + AI N T+ ++
Sbjct: 138 TFTTHWLAVEGVQPAIPQNPNLNELRMTQLPLTRGAIVTALNDTSIQTSVSEEKAEHVSQ 197
Query: 154 QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ-----ALVSLATDSGLH 208
K G E+K VKH+LS+ELQ+YFDK+ A++ D L Q AL SL +D+GLH
Sbjct: 198 VKPGQTNEVKPLVKHVLSKELQIYFDKVVG-ALTSKDQTLNAQHMKVAALTSLKSDTGLH 256
Query: 209 PLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 268
LVPYF F+A++++ L++ LL ++ ++++LL N + ++PY+H LMPS++T L+AK
Sbjct: 257 QLVPYFIQFIAEQITHNLSDLDLLTTMLEMIYSLLSNQSVFLDPYIHSLMPSILTLLLAK 316
Query: 269 RLGNR-----------LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD 317
+LG + LRDF++ L+ + +++ VY +L+ R+T+TLL LD
Sbjct: 317 KLGGSPSSTLPEDEQDFLEKTIALRDFSSTLLDHVLQKFPQVYKSLKPRVTRTLLKTFLD 376
Query: 318 PKRALTQHYGAVQGLAALGPNVVRLLL 344
R+ +YG ++G+ LG +R L
Sbjct: 377 SNRSFGTYYGCIRGVCILGNETIRFFL 403
>gi|365990257|ref|XP_003671958.1| hypothetical protein NDAI_0I01460 [Naumovozyma dairenensis CBS 421]
gi|343770732|emb|CCD26715.1| hypothetical protein NDAI_0I01460 [Naumovozyma dairenensis CBS 421]
Length = 517
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 148/396 (37%), Positives = 225/396 (56%), Gaps = 56/396 (14%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +A
Sbjct: 13 PQDTVKDVADSLGLENINADVLKALAMDVEYRILEIIEQAVKFKRHSKRDMLTTDDVAKA 72
Query: 65 LKLRNVEPVYGFASGGP----LRFRR-AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 119
L+ NVEP+YG+ G + F + G + ++YL+D++V+ +I PLP+ P +
Sbjct: 73 LRALNVEPLYGYHDGSAENKNVSFGKVTTGGQSIYYLNDEEVDLDKLINEPLPQVPRVPT 132
Query: 120 IVCHWLAIEGVQPVIPENAPVQAIAAP-------------------SNGTNNEQ------ 154
HWLA+EGVQP I EN + I A ++ T+NE
Sbjct: 133 FTAHWLAVEGVQPAIIENPNLNDIRASQPPFVRGAIVTALNDTSLQTSTTSNESAMIVSE 192
Query: 155 ----------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRS----DSVLFKQA-LV 199
K G E+K VKH+LS+ELQ+YF+K+ ++ D+ K A L
Sbjct: 193 NKESDHFSIVKPGQNTEVKPLVKHVLSKELQIYFNKVIAALITTDTENPDAQYMKTAALT 252
Query: 200 SLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMP 259
SL TDSGLH LVPYF F+A++++ L+N LL ++ ++++LL N I ++PY+H LMP
Sbjct: 253 SLRTDSGLHQLVPYFIQFIAEQITHNLSNLELLTTILEMIYSLLSNTSIFLDPYIHSLMP 312
Query: 260 SVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRLT 308
S++T L+AK+LG L + E LRDF A L+ + K++ +Y +L+ R+T
Sbjct: 313 SILTLLLAKKLGGTLTHDTPEELHESLERTNALRDFAASLLDYVLKKFPQIYKSLKPRIT 372
Query: 309 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
+TLL LD R +YG ++G++ L +R L
Sbjct: 373 RTLLKTFLDTNRVFGTYYGCLRGISVLESESIRFFL 408
>gi|332018695|gb|EGI59267.1| Transcription initiation factor TFIID subunit 6 [Acromyrmex
echinatior]
Length = 642
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 222/380 (58%), Gaps = 34/380 (8%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+ + +E+++VIA+SIG+ NF +AA LA DV YR++EI+Q+A K MRH +R +T D+
Sbjct: 10 TTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIVQDAAKFMRHGKRQRMTAHDI 69
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEA----PLPRAPL 116
D ALK++N+EP YGF + + FR A G R+L ++++K+++ +++ P+ PL
Sbjct: 70 DHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEIVATAGGQSWPKLPL 129
Query: 117 DTSIVCHWLAIEGVQPVIPENAP------------------------VQAIAAPSNGTNN 152
+ ++ HWL I+GVQP IPEN P + G +
Sbjct: 130 EITLRAHWLCIDGVQPTIPENPPPVSKDAQKLESVDPTIKLSSKNQNIGVGKPGGGGKSQ 189
Query: 153 EQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVP 212
+ ++ V +K H LS E QLY+ +ITE V SD +AL SL+ D GLH ++
Sbjct: 190 KLRNIETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEALQSLSADPGLHEMLA 248
Query: 213 YFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 270
F+A+ V + N+ +LL LMR+V LL NP + +E YLH+L+PSV TC+V+++L
Sbjct: 249 RMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLHELIPSVATCIVSRQL 308
Query: 271 GNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA-LTQHYGA 328
R DNHW LRDF ++L+A ICK + N +QTR+T+ AL + L YGA
Sbjct: 309 CMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQALAKNNQTPLASLYGA 368
Query: 329 VQGLAALGPNVVRLLLLPNL 348
++GL LGP V++ L++P +
Sbjct: 369 IEGLCELGPEVIKALVIPKI 388
>gi|367005434|ref|XP_003687449.1| hypothetical protein TPHA_0J01940 [Tetrapisispora phaffii CBS 4417]
gi|357525753|emb|CCE65015.1| hypothetical protein TPHA_0J01940 [Tetrapisispora phaffii CBS 4417]
Length = 507
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 225/395 (56%), Gaps = 55/395 (13%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ +A+S+G+ N + D +LA DVEYRI EI+++A+K RHS+R LTTDD+ +A
Sbjct: 13 PHDTVKDVAESLGVDNINEDVLKSLAMDVEYRILEIIEQAVKFKRHSKRDLLTTDDIAKA 72
Query: 65 LKLRNVEPVYGFASGG----PLRFRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G + F R A G + L+Y+DD++V+F +I PLP+ P
Sbjct: 73 LRILNVEPLYGYHDGSARNRSITFNRVSAQGGQSLYYVDDEEVDFDKLINEPLPQVPRLP 132
Query: 119 SIVCHWLAIEGVQPVIPEN------------------------APVQAIAAPSNGTNNEQ 154
+ HWLA+EG+QP I +N +Q+ ++ + + +E
Sbjct: 133 TFTTHWLAVEGIQPAIAQNPNLNDIRVSQPPMVRGAIVTALNDNSIQSSSSTAPISLSED 192
Query: 155 KD---------GLPVEIKLPVKHILSRELQLYFDKITELAV-----SRSDSVLFKQALVS 200
KD G EIK VKH+LS+ELQ+YF+K+ S + AL S
Sbjct: 193 KDSYQASTVKPGQNTEIKPLVKHVLSKELQIYFNKVVSALTNPNIESEEAQYMKAAALSS 252
Query: 201 LATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 260
L TDSGLH LVPYF F+A++++ L++ LL ++ +++ LL N I ++PY+H LMPS
Sbjct: 253 LKTDSGLHQLVPYFIQFIAEQITHHLSDLDLLSTILEMIYALLSNESIFLDPYIHSLMPS 312
Query: 261 VVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRLTK 309
++T L+AK++G + E LRDF A L+ + K+Y +Y +L+ R+T+
Sbjct: 313 ILTLLLAKKIGGSQNEESAESTSEFLEKTNALRDFAASLLDYLLKKYPQIYKSLKPRVTR 372
Query: 310 TLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
TLL LD RA +YG ++G++ L +R L
Sbjct: 373 TLLKTFLDTNRAFGTYYGCLRGISVLEAESIRFFL 407
>gi|241953681|ref|XP_002419562.1| subunit of TFIID and SAGA complexes, putative; transcription
initiation factor TFIID subunit, putative [Candida
dubliniensis CD36]
gi|223642902|emb|CAX43157.1| subunit of TFIID and SAGA complexes, putative [Candida dubliniensis
CD36]
Length = 519
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 239/433 (55%), Gaps = 72/433 (16%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV A S+G++ S + A +LA DVEY I EI++ A+K MRHS+R LTT DV A
Sbjct: 14 PYDTVRDAADSLGVT-ISDETAKSLAMDVEYHIHEIIETAVKFMRHSKRRQLTTSDVSNA 72
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
LK+ N+EP+YG+ + PL ++ + G + L+Y+D+ ++EF+ +I LP+ P +
Sbjct: 73 LKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFEKLINQQLPKVPRQVNFT 132
Query: 122 CHWLAIEGVQPVIPEN---APVQAIAAPSNGT-----------------NNEQKDGLP-- 159
HWLAIEGVQP++P+N + ++++ A G N E D
Sbjct: 133 AHWLAIEGVQPMVPQNPLPSEIKSLPAVVRGATTSMLGNDILSLGSKNENGESGDTTKHE 192
Query: 160 --------------------------VEIKLPVKHILSRELQLYFDKITELAVSR--SDS 191
+EIK +KH+LS+EL+LYFDK+ ++ +S
Sbjct: 193 SELLSNGGSANHTNNNNSNKKSTEKDMEIKPLIKHVLSKELKLYFDKVVDVLISTDPEKE 252
Query: 192 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIE 251
L AL SL +D GLH LVPYF F+A++++ L N +L ++ V+ L+ N I ++
Sbjct: 253 HLKNAALTSLKSDPGLHQLVPYFIQFIAEQITNQLRNIEILSTMLEVISALVDNKTIFLD 312
Query: 252 PYLHQLMPSVVTCLVAKRLG---NRLADNHWE----------LRDFTAKLVAAICKRYGH 298
PY+H LMP ++T L+AKR+G DN E +R+F A L+ I K YG
Sbjct: 313 PYVHALMPCILTLLLAKRIGPVIKLTQDNKQEWQDALKSQLAIREFAAILLQHIIKVYGS 372
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
Y+TL+ R+T+TLL ALLD + + YGA+ GL +G V++L+LL NL + S
Sbjct: 373 SYSTLRPRITRTLLRALLDSTKPVGTQYGALLGLRNMGTEVLKLVLLGNLKVWYS----- 427
Query: 359 MLLEKQKNEVKRH 371
++EK +N+ +R
Sbjct: 428 AIIEKNENDYERQ 440
>gi|395533667|ref|XP_003768876.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Sarcophilus harrisii]
Length = 668
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 226/387 (58%), Gaps = 52/387 (13%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L + +A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQMPEETCQLLTDE----------DALKFMHMGKRQKLTTSDI 61
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 62 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 121
Query: 121 VCHWLAIEGVQPVIPENAP-------------------------------VQAIAAPSNG 149
HWL+IEG QP IPEN P Q +A+ ++G
Sbjct: 122 KAHWLSIEGFQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGVAS-TDG 180
Query: 150 TNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATD 204
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 181 KGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATD 239
Query: 205 SGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVV 262
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+
Sbjct: 240 PGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVM 299
Query: 263 TCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 321
TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 300 TCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTP 359
Query: 322 LTQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 360 WTTRYGSIAGLAELGHDVIKTLILPRL 386
>gi|6321326|ref|NP_011403.1| Taf6p [Saccharomyces cerevisiae S288c]
gi|1729811|sp|P53040.1|TAF6_YEAST RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=TBP-associated factor 6; AltName:
Full=TBP-associated factor 60 kDa; Short=TAFII-60;
Short=TAFII60
gi|840662|gb|AAA83389.1| TAF60 [Saccharomyces cerevisiae]
gi|1310712|emb|CAA66240.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1322661|emb|CAA96819.1| TAF60 [Saccharomyces cerevisiae]
gi|51830327|gb|AAU09726.1| YGL112C [Saccharomyces cerevisiae]
gi|285812096|tpg|DAA07996.1| TPA: Taf6p [Saccharomyces cerevisiae S288c]
gi|323305004|gb|EGA58758.1| Taf6p [Saccharomyces cerevisiae FostersB]
gi|392299151|gb|EIW10245.1| Taf6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 516
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 231/397 (58%), Gaps = 57/397 (14%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A+S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +A
Sbjct: 13 PQDTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKA 72
Query: 65 LKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G + F + G + ++YLD+++V+F +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLP 132
Query: 119 SIVCHWLAIEGVQPVIPEN----------------------------APVQAIAAPSNGT 150
+ HWLA+EGVQP I +N PV + A ++ T
Sbjct: 133 TFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDNSLQTPVTSTTASASVT 192
Query: 151 N-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELAVSRSDSV---LFKQAL 198
+ + K G E+K VKH+LS+ELQ+YF+K+ T A S++D + + AL
Sbjct: 193 DTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTAKSQADEAAQHMKQAAL 252
Query: 199 VSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLM 258
SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++LL N I ++PY+H LM
Sbjct: 253 TSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSLLSNTSIFLDPYIHSLM 312
Query: 259 PSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRL 307
PS++T L+AK+LG D+ + LRDF A L+ + K++ Y +L+ R+
Sbjct: 313 PSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRV 372
Query: 308 TKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
T+TLL LD R +YG ++G++ L +R L
Sbjct: 373 TRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|367008420|ref|XP_003678710.1| hypothetical protein TDEL_0A01670 [Torulaspora delbrueckii]
gi|359746367|emb|CCE89499.1| hypothetical protein TDEL_0A01670 [Torulaspora delbrueckii]
Length = 506
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 227/394 (57%), Gaps = 54/394 (13%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ + +S+GI + S D ALA DVEYRI EI+++A+K RHS+R LTTDD+ +A
Sbjct: 13 PQDTVKDVTESLGIDSISDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDALTTDDISKA 72
Query: 65 LKLRNVEPVYGFASGGPL----RFRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G + F R A G + ++YLDD++V+F +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYHDGSAIDKDVTFSRVNAAGGQTVYYLDDEEVDFDKLINEPLPQVPRLP 132
Query: 119 SIVCHWLAIEGVQPVIPEN------------------------APVQAIAAPSNGTNNEQ 154
+ HWLA+EGVQP I +N +Q +A + + E+
Sbjct: 133 TFSTHWLAVEGVQPAIIQNPNLNDIRISQPPIVRGAIVTALNDNSLQTSSAAAISLSEEK 192
Query: 155 --------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ-----ALVSL 201
K G +E+K VKH+LS+ELQ+YF+K+ S++ + Q AL SL
Sbjct: 193 HAQHLSTVKPGQNIEVKPLVKHVLSKELQVYFNKVISALTSKNGNDENGQHMKAAALTSL 252
Query: 202 ATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 261
TDSGLH LVPYF F+A++++ L++ LL ++ ++++LL N I ++PY+H LMPS+
Sbjct: 253 KTDSGLHQLVPYFIQFIAEQITHNLSDLELLTTILEMIYSLLSNESIFLDPYIHSLMPSI 312
Query: 262 VTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRLTKT 310
+T L+AK+LG + + E LRDF A L+ + K++ VY +L+ R+T+T
Sbjct: 313 LTLLLAKKLGGSPSSDSPEDVSAFLERTNALRDFAASLLDYVLKKFPQVYKSLKPRVTRT 372
Query: 311 LLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
LL LD R +YG ++G++ +R L
Sbjct: 373 LLKTFLDTNRVFGTYYGCLRGVSMFESEFIRFFL 406
>gi|256273204|gb|EEU08151.1| Taf6p [Saccharomyces cerevisiae JAY291]
Length = 516
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 231/397 (58%), Gaps = 57/397 (14%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A+S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +A
Sbjct: 13 PQDTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKA 72
Query: 65 LKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G + F + G + ++YLD+++V+F +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLP 132
Query: 119 SIVCHWLAIEGVQPVIPEN----------------------------APVQAIAAPSNGT 150
+ HWLA+EGVQP I +N PV + A ++ T
Sbjct: 133 TFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDNSLQTPVTSTTASASLT 192
Query: 151 N-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELAVSRSDSV---LFKQAL 198
+ + K G E+K VKH+LS+ELQ+YF+K+ T A S++D + + AL
Sbjct: 193 DTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTAKSQADEAAQHMKQAAL 252
Query: 199 VSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLM 258
SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++LL N I ++PY+H LM
Sbjct: 253 TSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSLLSNTSIFLDPYIHSLM 312
Query: 259 PSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRL 307
PS++T L+AK+LG D+ + LRDF A L+ + K++ Y +L+ R+
Sbjct: 313 PSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRV 372
Query: 308 TKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
T+TLL LD R +YG ++G++ L +R L
Sbjct: 373 TRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|51094601|gb|EAL23853.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
Length = 667
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 225/386 (58%), Gaps = 50/386 (12%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L + +A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDE----------DALKFMHMGKRQKLTTSDI 61
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 62 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 121
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A ++G
Sbjct: 122 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGK 181
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 182 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 240
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 241 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 300
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 301 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 360
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 361 TTRYGSIAGLAELGHDVIKTLILPRL 386
>gi|291411247|ref|XP_002721900.1| PREDICTED: TBP-associated factor 6 isoform 1 [Oryctolagus
cuniculus]
Length = 678
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 224/386 (58%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q A R L +
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQVAGAFRPGCRLGPLLPPGL 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
+ L+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 GLMMSLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AAP++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSTKPGQEEDGPLKSKGQGAAPADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGTPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|291411249|ref|XP_002721901.1| PREDICTED: TBP-associated factor 6 isoform 2 [Oryctolagus
cuniculus]
Length = 668
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 224/386 (58%), Gaps = 40/386 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q A R L +
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQVAGAFRPGCRLGPLLPPGL 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
+ L+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 GLMMSLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AAP++G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSTKPGQEEDGPLKSKGQGAAPADGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 192 GKEKKAPPLLEGTPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 250
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 251 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 310
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 311 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 370
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 371 TTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|426255396|ref|XP_004021334.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 6, partial [Ovis aries]
Length = 719
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 221/385 (57%), Gaps = 40/385 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 58 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 117
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 118 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 177
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AAP++G
Sbjct: 178 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPADGK 237
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 238 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 296
Query: 206 GLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNP-HIQIEPYLHQLMPSVVTC 264
GL+ ++P F+ F+++ V RG R P I +H+L+P+V+TC
Sbjct: 297 GLYQMLPRFSTFISEGV-RGHGRLEWGSGGGRAGEEAHGGPPCCPIPAXVHELIPAVMTC 355
Query: 265 LVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT 323
+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T
Sbjct: 356 IVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWT 415
Query: 324 QHYGAVQGLAALGPNVVRLLLLPNL 348
YG++ GLA LG +V++ L+LP L
Sbjct: 416 TRYGSIAGLAELGHDVIKTLILPRL 440
>gi|323355096|gb|EGA86926.1| Taf6p [Saccharomyces cerevisiae VL3]
Length = 516
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 230/397 (57%), Gaps = 57/397 (14%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +A
Sbjct: 13 PQDTVKDVAXSLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKA 72
Query: 65 LKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G + F + G + ++YLD+++V+F +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLP 132
Query: 119 SIVCHWLAIEGVQPVIPEN----------------------------APVQAIAAPSNGT 150
+ HWLA+EGVQP I +N PV + A ++ T
Sbjct: 133 TFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDNSLQTPVTSTTASASVT 192
Query: 151 N-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELAVSRSDSV---LFKQAL 198
+ + K G E+K VKH+LS+ELQ+YF+K+ T A S++D + + AL
Sbjct: 193 DTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTAKSQADEAAQHMKQAAL 252
Query: 199 VSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLM 258
SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++LL N I ++PY+H LM
Sbjct: 253 TSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSLLSNTSIFLDPYIHSLM 312
Query: 259 PSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRL 307
PS++T L+AK+LG D+ + LRDF A L+ + K++ Y +L+ R+
Sbjct: 313 PSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRV 372
Query: 308 TKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
T+TLL LD R +YG ++G++ L +R L
Sbjct: 373 TRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|151943698|gb|EDN62008.1| TATA-binding protein-associated-factor [Saccharomyces cerevisiae
YJM789]
gi|190407066|gb|EDV10333.1| transcription initiation factor TFIID subunit 6 [Saccharomyces
cerevisiae RM11-1a]
gi|259146397|emb|CAY79654.1| Taf6p [Saccharomyces cerevisiae EC1118]
gi|365765821|gb|EHN07327.1| Taf6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 516
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 230/397 (57%), Gaps = 57/397 (14%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +A
Sbjct: 13 PQDTVKDVAGSLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKA 72
Query: 65 LKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G + F + G + ++YLD+++V+F +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLP 132
Query: 119 SIVCHWLAIEGVQPVIPEN----------------------------APVQAIAAPSNGT 150
+ HWLA+EGVQP I +N PV + A ++ T
Sbjct: 133 TFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDNSLQTPVTSTTASASVT 192
Query: 151 N-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELAVSRSDSV---LFKQAL 198
+ + K G E+K VKH+LS+ELQ+YF+K+ T A S++D + + AL
Sbjct: 193 DTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTAKSQADEAAQHMKQAAL 252
Query: 199 VSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLM 258
SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++LL N I ++PY+H LM
Sbjct: 253 TSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSLLSNTSIFLDPYIHSLM 312
Query: 259 PSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRL 307
PS++T L+AK+LG D+ + LRDF A L+ + K++ Y +L+ R+
Sbjct: 313 PSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRV 372
Query: 308 TKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
T+TLL LD R +YG ++G++ L +R L
Sbjct: 373 TRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|401625786|gb|EJS43778.1| taf6p [Saccharomyces arboricola H-6]
Length = 516
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 232/399 (58%), Gaps = 61/399 (15%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A+S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +A
Sbjct: 13 PQDTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKA 72
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI--------GYRDLFYLDDKDVEFKDVIEAPLPRAPL 116
L++ NVEP+YG+ G + RA+ G + ++YLD+++V+F +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYYDGSEVN--RAVSFSKVNTSGGQSVYYLDEEEVDFDKLINEPLPQVPR 130
Query: 117 DTSIVCHWLAIEGVQPVIPEN----------------------------APVQAIAAPSN 148
+ HWLA+EGVQP I +N P + AA ++
Sbjct: 131 LPTFTTHWLAVEGVQPAIIQNPNLNDIRISQPPFVRGAIVTALNDNSLQTPATSSAANAS 190
Query: 149 GTN-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELAVSRSDSVL--FKQA 197
T+ + K G E+K VKH+LS+ELQ+YF+K+ T A +++D + KQA
Sbjct: 191 VTDTSVSQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTAKNQNDESVQHMKQA 250
Query: 198 -LVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 256
L SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++LL N I ++PY+H
Sbjct: 251 ALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSLLSNSSIFLDPYIHS 310
Query: 257 LMPSVVTCLVAKRLG-----------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQT 305
LMPS++T L+AK+LG + + LRDF A L+ + K++ Y +L+
Sbjct: 311 LMPSILTLLLAKKLGGSPKYDSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKP 370
Query: 306 RLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 371 RVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|323337577|gb|EGA78822.1| Taf6p [Saccharomyces cerevisiae Vin13]
Length = 523
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 230/397 (57%), Gaps = 57/397 (14%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +A
Sbjct: 13 PQDTVKDVAGSLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKA 72
Query: 65 LKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G + F + G + ++YLD+++V+F +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLP 132
Query: 119 SIVCHWLAIEGVQPVIPEN----------------------------APVQAIAAPSNGT 150
+ HWLA+EGVQP I +N PV + A ++ T
Sbjct: 133 TFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDNSLQTPVTSTTASASVT 192
Query: 151 N-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELAVSRSDSV---LFKQAL 198
+ + K G E+K VKH+LS+ELQ+YF+K+ T A S++D + + AL
Sbjct: 193 DTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTAKSQADEAAQHMKQAAL 252
Query: 199 VSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLM 258
SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++LL N I ++PY+H LM
Sbjct: 253 TSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSLLSNTSIFLDPYIHSLM 312
Query: 259 PSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRL 307
PS++T L+AK+LG D+ + LRDF A L+ + K++ Y +L+ R+
Sbjct: 313 PSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRV 372
Query: 308 TKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
T+TLL LD R +YG ++G++ L +R L
Sbjct: 373 TRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|365760774|gb|EHN02468.1| Taf6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 516
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 229/399 (57%), Gaps = 61/399 (15%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A+S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +A
Sbjct: 13 PQDTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKA 72
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI--------GYRDLFYLDDKDVEFKDVIEAPLPRAPL 116
L++ NVEP+YG+ G + RA+ G + ++YLD+++V+F +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYYDGSEVN--RAVSFSKVNTSGGQSVYYLDEEEVDFDKLINEPLPQVPR 130
Query: 117 DTSIVCHWLAIEGVQPVIPEN----------------APVQAIAAPS------------- 147
+ HWLA+EGVQP I +N A V A+ S
Sbjct: 131 LPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDNSFQTPASSSAANAS 190
Query: 148 -NGTNNEQ-----KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS-----VLFKQ 196
TN Q K G E+K VKH+LS+ELQ+YF+K+ +++ + + +
Sbjct: 191 VADTNASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVVSTLTAKNQTDENAQHMKQA 250
Query: 197 ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 256
AL SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++LL N I ++PY+H
Sbjct: 251 ALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSLLSNSSIFLDPYIHS 310
Query: 257 LMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQT 305
LMPS++T L+AK+LG D+ + LRDF A L+ + K++ Y +L+
Sbjct: 311 LMPSILTLLLAKKLGGSPKDDSPQETHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKP 370
Query: 306 RLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 371 RVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|254580585|ref|XP_002496278.1| ZYRO0C14718p [Zygosaccharomyces rouxii]
gi|238939169|emb|CAR27345.1| ZYRO0C14718p [Zygosaccharomyces rouxii]
Length = 508
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 225/396 (56%), Gaps = 56/396 (14%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A+S+GI N S D ALA DVEYRI EI+++A+K RHS+R LTTDD+ +A
Sbjct: 13 PQDTVKDVAESLGIENISDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDISKA 72
Query: 65 LKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G F + A+G + ++YL+D++V+F +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYHDGSAFEQDVSFTKVQAVGGQSVYYLNDEEVDFDKLINEPLPQVPRVP 132
Query: 119 SIVCHWLAIEGVQPVIPENAPVQAI---------AAPSNGTNN----------------E 153
+ HWLA+EGVQP I +N ++ I A N+ E
Sbjct: 133 TFTTHWLAVEGVQPAIIQNPNLKDIRLSQPPIVRGAIVTALNDNSLQSSTSSAASISLGE 192
Query: 154 QKDGL---------PVEIKLPVKHILSRELQLYFDKITELAVSRS----DSVLFKQA-LV 199
+KD +E+K VKH+LS ELQ+YF+K+ S+ ++ K A L
Sbjct: 193 EKDAQHMSSVKPNQNIEVKPLVKHVLSMELQIYFNKVIAALTSKDQDDPNAQHMKAAGLT 252
Query: 200 SLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMP 259
SL TDSGLH LVPYF F+A++++ L++ LL ++ ++++LL N I ++PY+H LMP
Sbjct: 253 SLKTDSGLHQLVPYFIQFIAEQITHNLSDLDLLTTILEIIYSLLSNKSIFLDPYIHSLMP 312
Query: 260 SVVTCLVAKRLGN-----------RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 308
S++T L+AK+LG + LRDF A L+ + K++ VY +L+ R+
Sbjct: 313 SILTLLLAKKLGGSPDSDRPEDVREFLEKTNALRDFAASLLDYVLKKFPQVYKSLKPRVI 372
Query: 309 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
+TLL LD R +YG ++G++ L +R L
Sbjct: 373 RTLLKTFLDTNRVFGTYYGCLRGVSVLESESIRFFL 408
>gi|431898257|gb|ELK06952.1| Transcription initiation factor TFIID subunit 6 [Pteropus alecto]
Length = 652
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 218/384 (56%), Gaps = 62/384 (16%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 131
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A AAP+ G
Sbjct: 132 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPAEGK 191
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ K+A+
Sbjct: 192 GKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA---KRAV------- 241
Query: 206 GLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCL 265
V+ NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+
Sbjct: 242 ---------------RVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCI 286
Query: 266 VAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQ 324
V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T
Sbjct: 287 VSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTT 346
Query: 325 HYGAVQGLAALGPNVVRLLLLPNL 348
YG++ GLA LG +V++ L+LP L
Sbjct: 347 RYGSIAGLAELGHDVIKTLILPRL 370
>gi|328860727|gb|EGG09832.1| hypothetical protein MELLADRAFT_47407 [Melampsora larici-populina
98AG31]
Length = 562
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 242/419 (57%), Gaps = 28/419 (6%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
PK +V+ +A+S+GI N S +AA ALA D+E+R+ +I++E+IK MRH++RT L +DVD A
Sbjct: 12 PKTSVKDVAESLGIGNLSDEAASALAADLEFRLNQIIEESIKFMRHAKRTKLMVEDVDYA 71
Query: 65 LKLRNVEPVYGFASGGPLRFRRAIGYR-DLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCH 123
L+ +N+EP++GFAS L FRR +L+++DD++++ ++ A LP P +TS H
Sbjct: 72 LRAKNIEPLWGFASTDTLSFRRTTSTAGNLYFVDDEEIDLTKIVNAQLPPIPRETSYTAH 131
Query: 124 WLAIEGVQPVIPENAPVQ---------AIAAPSNGTNNEQKDGLPVEIKLPVKHILSREL 174
WLA+EGVQP IP+N A + S + E+ + K+ + LSREL
Sbjct: 132 WLAVEGVQPAIPQNPSAAELKNHPAFPAYLSASRSDSKEEDE----HKKMNINQHLSREL 187
Query: 175 QLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN-----Y 229
+LYFD++T A S D AL SL+ D GLH LVPY FVA++V+ L +
Sbjct: 188 RLYFDRVTS-AASSEDQRAKNAALASLSGDPGLHQLVPYLVQFVAEKVTHTLTSTSSPQL 246
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLV 289
S L + ++ ++L N H+ +EPYLHQ++PS++TCL++ + E+R A L+
Sbjct: 247 SSLRDSIHILESILSNSHLYLEPYLHQILPSMLTCLLSSSFSSSPPTLEIEVRKLAASLL 306
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 349
+ R+ Y TL++R+ KTL +L+ PK GAV G+ ALG R++L NL
Sbjct: 307 STQVSRFQPFYPTLRSRILKTLAKSLISPKATDGNRLGAVIGIRALGMEATRVILAQNLK 366
Query: 350 PYLSLLEPEM----LLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPAR 404
+ LE ++ L+E++ ++ + + G + I +RLK P L ++PA+
Sbjct: 367 AFGECLEADIAEGKLVEERVQDLVKETLSTMAGFF---SSSEITERLKK-PKLITIPAQ 421
>gi|410074875|ref|XP_003955020.1| hypothetical protein KAFR_0A04500 [Kazachstania africana CBS 2517]
gi|372461602|emb|CCF55885.1| hypothetical protein KAFR_0A04500 [Kazachstania africana CBS 2517]
Length = 551
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 221/399 (55%), Gaps = 61/399 (15%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A+S+G+ N + D ALA DVEYRI EI+++A+K RHS+ LTT DV +A
Sbjct: 13 PQDTVKDVAESLGLDNINEDVLKALAMDVEYRILEIVEQAVKFKRHSKTEVLTTGDVAKA 72
Query: 65 LKLRNVEPVYGFASGGPLRFRRAIGY--------RDLFYLDDKDVEFKDVIEAPLPRAPL 116
LK+ NVEP+YG+ L F + + Y + ++YL++++V+F +I PLP+ P
Sbjct: 73 LKVLNVEPLYGYHDN--LSFDKNVSYTKVHTSGGQSVYYLNEEEVDFDKLINEPLPQVPR 130
Query: 117 DTSIVCHWLAIEGVQPVIPEN------------------------APVQAIAAPSNGTNN 152
+ HWLAIEGVQP I EN +Q + S+
Sbjct: 131 LPNFSTHWLAIEGVQPAIVENPNLLEIRSSIPPTTRGAIVTALNDNSLQTASGSSSSALT 190
Query: 153 EQKD-----------GLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ----- 196
Q+D G E+K VKH+LS+ELQ+YF+K+ S+ + Q
Sbjct: 191 LQEDKISQPLSSVKPGQNTEVKPLVKHVLSKELQIYFNKVISALTSKDQEDVNAQHMRTA 250
Query: 197 ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 256
AL SL TD+GLH LVPYF F+A++++ L++ LL ++ ++++LL NP I ++PY+H
Sbjct: 251 ALTSLRTDNGLHQLVPYFIQFIAEQITHNLSDLELLTTILEMIYSLLSNPSIFLDPYIHS 310
Query: 257 LMPSVVTCLVAKRLG-----------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQT 305
LMPS++T L+AK+LG + LRDF A L+ + K++ VY +L+
Sbjct: 311 LMPSILTLLLAKKLGGAPNTDSKDDLTEFLEKTNALRDFAASLLDYVLKKFPQVYKSLKP 370
Query: 306 RLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
R+T+TLL LD R +YG ++G+ L VR L
Sbjct: 371 RVTRTLLKTFLDTNRVFGTYYGCLKGITVLESEAVRFFL 409
>gi|326426737|gb|EGD72307.1| hypothetical protein PTSG_00325 [Salpingoeca sp. ATCC 50818]
Length = 583
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 215/360 (59%), Gaps = 19/360 (5%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ P E V V+A++ + D LA D+EYRIREI Q+A K RH RR +TTDD
Sbjct: 1 MSVFPSEMVRVVAEAGRFPTITDDVCRVLAADLEYRIREIAQDAAKFTRHGRRRRMTTDD 60
Query: 61 VDEALKLRNVEPVYGFASG---GPLR--FRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAP 115
++ A+++RN+EPVYG+ SG G + F+RA D+FY+ D ++I APLP P
Sbjct: 61 INAAMRVRNMEPVYGYPSGSHTGTVESLFKRA-KESDVFYIPDTVKRVHEIIGAPLPSMP 119
Query: 116 LDTSIVCHWLAIEGVQPVIPENAPVQA--IAAPSNGTNNEQ-----KDGLP---VEIKLP 165
+ + HWLAIEG QP IP+N PV A P G K+G P VEIK
Sbjct: 120 AEMTFTSHWLAIEGEQPTIPQNPPVHTTHTAEPEEGQEPAAKAPKLKEGKPREEVEIKQL 179
Query: 166 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 225
KH LSRE QL F+ I + + +D + AL +L+TD GLH LVP+F F+ + +
Sbjct: 180 EKHTLSREQQLLFNYIIKDLLG-ADKTAKQAALKTLSTDHGLHQLVPFFMEFIRSQTTEH 238
Query: 226 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 285
++ + + +++ +V L+QN ++ +EPYLH ++P V TC V+K+L + A +H LR
Sbjct: 239 ASDPNAIASVVGMVDALVQNNNVYLEPYLHHVIPVVATCAVSKKLAS-YAPDHLALRVRA 297
Query: 286 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 345
A++ +IC +YG Y+ LQ R+ K + +L +R+L +YGA++GLAA GP VV L L+
Sbjct: 298 AQVAVSICVKYGTKYHDLQPRILKVFQD-VLKRRRSLLSYYGAIKGLAAFGPRVVDLYLV 356
>gi|401841666|gb|EJT44019.1| TAF6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 516
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 227/399 (56%), Gaps = 61/399 (15%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A+S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +A
Sbjct: 13 PQDTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKA 72
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI--------GYRDLFYLDDKDVEFKDVIEAPLPRAPL 116
L++ NVEP+YG+ G + RA+ G + ++YLD+++V+F +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYYDGSEVN--RAVSFSKVNTSGGQSVYYLDEEEVDFDKLINEPLPQVPR 130
Query: 117 DTSIVCHWLAIEGVQPVIPENAPVQ------------AIAAPSNGTNNEQ---------- 154
+ HWLA+EGVQP I +N + AI N + +
Sbjct: 131 LPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDNSFQTPASSSAANAS 190
Query: 155 -------------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS-----VLFKQ 196
K G E+K VKH+LS+ELQ+YF+K+ +++ + + +
Sbjct: 191 VADTSASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVVSTLTAKNQTDENAQHMKQA 250
Query: 197 ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 256
AL SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++LL N I ++PY+H
Sbjct: 251 ALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSLLSNSSIFLDPYIHS 310
Query: 257 LMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQT 305
LMPS++T L+AK+LG D+ + LRDF A L+ + K++ Y +L+
Sbjct: 311 LMPSILTLLLAKKLGGSPKDDSPQETHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKP 370
Query: 306 RLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 371 RVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|358056098|dbj|GAA97952.1| hypothetical protein E5Q_04632 [Mixia osmundae IAM 14324]
Length = 511
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 221/384 (57%), Gaps = 41/384 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P ++V+ +A+S GI+N S + A ALA DVEYR+ E+++E++K MRH++RT L DD+
Sbjct: 10 SVWPADSVKDVAESCGIANLSDEVAAALATDVEYRLHELVEESLKFMRHAKRTKLRVDDI 69
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALK RNVEP+YGF + PL FR+ ++Y++D++++ ++ A LP AP D S
Sbjct: 70 DYALKARNVEPLYGFRTNTPLAFRKTTTATGTVYYVEDEEIDLNRILHAQLPPAPRDVSY 129
Query: 121 VCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN--NEQKDGL-----------PVEIKL 164
HWLAIEGVQP IP+N A ++A+ P N + G P +++
Sbjct: 130 TAHWLAIEGVQPAIPQNPSPAEIRALQTPHLHANAFGSRAGGFASQAPKVPTANPDDVRP 189
Query: 165 PVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSR 224
VKH+LSRELQLYF+++ A S SD + + AL SL D+G+ PLVPY + ++++
Sbjct: 190 LVKHVLSRELQLYFERLVAAATSESDETMREAALASLRGDTGIGPLVPYLVQWSVEKIAH 249
Query: 225 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD-------N 277
L + LL + V+ L+ NP++ IEPYLHQ+ P+V+T L+ LG+ A +
Sbjct: 250 NLRDLVLLDQTLSVIHALIDNPNLFIEPYLHQIFPAVLTPLLTTVLGDGSAVAFGAAQLH 309
Query: 278 HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD----PKRA------------ 321
+LR L+ I RY H Y L+ R+ + L+ AL + P A
Sbjct: 310 STDLRQHAGSLLRLIMDRYAHAYPALKPRILRALVRALTELPMLPSTAEGELSERVSVAA 369
Query: 322 -LTQHYGAVQGLAALGPNVVRLLL 344
+ YGAV G+ A+G VV+ +L
Sbjct: 370 SIGTRYGAVLGIQAMGTQVVQSIL 393
>gi|156044847|ref|XP_001588979.1| hypothetical protein SS1G_09612 [Sclerotinia sclerotiorum 1980]
gi|154694007|gb|EDN93745.1| hypothetical protein SS1G_09612 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 469
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 219/364 (60%), Gaps = 20/364 (5%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V +A+S+GIS +A AL+ +VEYR+ +++ EA++ M +RT L T D+ +ALK
Sbjct: 11 DNVRDVAESVGISQLGEEAVRALSQEVEYRVGQVIVEAMRFMHQGKRTVLGTQDISQALK 70
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLRF A +G + LFY++D++V+F+ +I APLP+ P D S HW
Sbjct: 71 VLDVEPLYGYESTRPLRFGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMSFTAHW 130
Query: 125 LAIEGVQPVIPENAPVQAIA-----APSNGTNNEQKDGLP----VEIKLPVKHILSRELQ 175
LA+EGVQP IP+N P A A P N L V +K VKHI+S+EL
Sbjct: 131 LAVEGVQPSIPQN-PTTAEARANDLVPKGPGANPALGALAGNDNVSVKPLVKHIVSKELI 189
Query: 176 LYFDKITELAVSRSDS----VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 231
L+FDKI + + L + AL S+ +D GLH LVPYF +F+A++V+ L N +
Sbjct: 190 LFFDKIRAAILDDDNDPEVVTLRESALESVRSDPGLHQLVPYFVHFIAEKVTHSLGNLFV 249
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD---NHWELRDFTAKL 288
L ++++ L+ N + + PY+ L P ++TCLV + LG +D ++LRD A L
Sbjct: 250 LQQMLKLSDALISNKTLFVNPYISSLCPPILTCLVGRTLGTGASDELKEKYQLRDTAASL 309
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPN 347
+ I K+Y L+ RL ++ L LDP R+ ++YGA+ GL A+ GP+ V+ L+LPN
Sbjct: 310 IGVISKKYTESNAQLRARLARSCLKFFLDPTRSPGEYYGAISGLLAIGGPDGVKALILPN 369
Query: 348 LGPY 351
L +
Sbjct: 370 LNAF 373
>gi|254565253|ref|XP_002489737.1| Subunit (60 kDa) of TFIID and SAGA complexes [Komagataella pastoris
GS115]
gi|238029533|emb|CAY67456.1| Subunit (60 kDa) of TFIID and SAGA complexes [Komagataella pastoris
GS115]
gi|328350154|emb|CCA36554.1| Transcription initiation factor TFIID subunit 6 [Komagataella
pastoris CBS 7435]
Length = 485
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/406 (37%), Positives = 239/406 (58%), Gaps = 50/406 (12%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P +TV+ A+S+GI N + +AA LA D+EYRI EI+ +A K MRH +R TL T D+D A
Sbjct: 19 PSDTVKDAAESLGIFNLNEEAAKNLAMDIEYRIHEILDQASKFMRHGKRRTLHTSDIDRA 78
Query: 65 LKLRNVEPVYGFASGGPLRFRRAI--GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
LK+ N+EP+YG+ PL F+ A+ ++L+Y+DD +V+F+ +I PLP+ P ++
Sbjct: 79 LKVLNLEPLYGYDVSRPLVFKEALVGAGQNLYYVDDDEVDFEKLINEPLPKVPRFSTFTA 138
Query: 123 HWLAIEGVQPVIPENAPVQAI--------------------------------AAPSNGT 150
HWLAIEGVQP IP+N I PS +
Sbjct: 139 HWLAIEGVQPAIPQNPSPNDIKNILPINRGSMENMFSLINDEVKEDTNEEFTSTGPSVSS 198
Query: 151 N-NEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS----VLFKQALVSLATDS 205
N + QK GL E+K VKH+LSRELQLYFDKI E+ +++ ++ +L AL S+ D
Sbjct: 199 NISNQKQGL--EVKPLVKHVLSRELQLYFDKIVEVLLNQEETKEAELLRNSALQSVRADP 256
Query: 206 GLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCL 265
GLH LVPYF F+++ +++ L N SLL ++ ++++LL N + +EPY+H ++P ++T L
Sbjct: 257 GLHQLVPYFIQFISETITKNLKNISLLSTMLELIYSLLMNESLFLEPYVHAIIPCILTLL 316
Query: 266 VAKRLGNRLADNHWE------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPK 319
+AK++GN D+ + LR+ +A L+ + + +G Y+TL+ R+T+TLL A +
Sbjct: 317 LAKKIGN--VDDELQKQQQLALRELSASLLERVIEDFGSSYSTLKPRITRTLLRAFVSVN 374
Query: 320 RAL-TQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQ 364
YGA+ GL LG V+R+++L N+ + S ++ E Q
Sbjct: 375 NTTPGTQYGALLGLRGLGSEVIRIVVLGNVINWSSTFLEKLQQEDQ 420
>gi|156848850|ref|XP_001647306.1| hypothetical protein Kpol_1002p96 [Vanderwaltozyma polyspora DSM
70294]
gi|156117991|gb|EDO19448.1| hypothetical protein Kpol_1002p96 [Vanderwaltozyma polyspora DSM
70294]
Length = 509
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 219/396 (55%), Gaps = 56/396 (14%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A+S+GI N S D LA DVEYRI EI+++A+K RHS+R LTTDD+ +A
Sbjct: 13 PQDTVKDVAESLGIDNISEDVLKGLAMDVEYRILEIIEQAVKFKRHSKRDILTTDDISKA 72
Query: 65 LKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L+ NVEP+YG+ G + F + A G + ++YL+D++V+F +I LP+ P
Sbjct: 73 LRALNVEPLYGYHDGSAINKNISFNKVNASGGQSIYYLNDEEVDFDKLINNTLPQVPRLP 132
Query: 119 SIVCHWLAIEGVQPVIPENAPVQAI---------AAPSNGTNNEQ--------------- 154
+ HWLA+EGVQP I +N + I A N+
Sbjct: 133 TFTTHWLAVEGVQPAIAQNPNLNDIRISQPPIVRGAIVTALNDNSLQASSSSAESISLSE 192
Query: 155 ----------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS-----VLFKQALV 199
K G E+K +KH+LS+ELQ+YF+K+ S S + AL
Sbjct: 193 DKNSSRSSAVKPGHNTEVKPLLKHVLSKELQIYFNKVVAALTSTDTSDPNAQYMKAAALS 252
Query: 200 SLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMP 259
SL TDSGLH LVPYF F+A++++ L++ LL ++ ++++LL N I ++PY+H LMP
Sbjct: 253 SLKTDSGLHQLVPYFIQFIAEQITHHLSDLDLLTTILEMIYSLLSNESIFLDPYIHSLMP 312
Query: 260 SVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRLT 308
S++T L+AK+LG A + E LRDF A L+ + K++ Y +L+ R+T
Sbjct: 313 SILTLLLAKKLGGSPASDSKEDIQELLEKANALRDFAASLLDYVLKKFPQFYKSLKPRVT 372
Query: 309 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
+TLL LD R +YG ++G++ L +R L
Sbjct: 373 RTLLKTFLDTNRVFGTYYGCLRGISVLESESIRFFL 408
>gi|50287705|ref|XP_446282.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525589|emb|CAG59206.1| unnamed protein product [Candida glabrata]
Length = 536
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 227/406 (55%), Gaps = 66/406 (16%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV +A+S+G+ N + + ALA DVEYRI EI+++A+K RHS+R TLTTDDV +A
Sbjct: 29 PQDTVRDVAESLGLENVNEEVLKALAMDVEYRILEIIEQAVKFKRHSKRDTLTTDDVAKA 88
Query: 65 LKLRNVEPVYGFASGG----PLRFRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G L F + G + ++YLD+ +V+F +I PLP+ P
Sbjct: 89 LRVLNVEPLYGYHDGSHSNRELSFAKVNTAGGQSVYYLDEGEVDFDKLINEPLPQVPRVP 148
Query: 119 SIVCHWLAIEGVQPVIPEN----------------APVQAI----------AAPSNGTNN 152
+ HWLA+EGVQP I +N A V A+ + +NGT
Sbjct: 149 TFTTHWLAVEGVQPAIVQNPNLNDIRQSQPPIVRGAIVTALNESSSQLGGSSGSNNGTGK 208
Query: 153 EQ-----------------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV--- 192
+ G V++K VKH+LS+ELQ+YF++I +S
Sbjct: 209 GSVGGESVGGSGSNLASVVQPGQNVDVKPLVKHVLSKELQIYFNQIISTLTKHVESGDEE 268
Query: 193 ---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQ 249
+ AL+SL TD+GLH LVPYF F+A++++ L++ LL ++ ++++LL N I
Sbjct: 269 GQHMKGAALMSLKTDTGLHQLVPYFIQFIAEQITHNLSDLELLGTILEMMYSLLSNTSIF 328
Query: 250 IEPYLHQLMPSVVTCLVAKRLGN-----------RLADNHWELRDFTAKLVAAICKRYGH 298
++PY+H LMPSV+T L+AKRLG + +RDF A L+ I +++
Sbjct: 329 LDPYIHSLMPSVLTLLLAKRLGGTPEKDDEASAVEFLEKTNAVRDFAASLLDHILRKFPQ 388
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
VY +L+ R+T+TLL LD R+ +YG ++G++ L P +R L
Sbjct: 389 VYKSLKPRVTRTLLKTFLDTNRSFGTYYGCLRGVSVLEPESIRFFL 434
>gi|323348637|gb|EGA82880.1| Taf6p [Saccharomyces cerevisiae Lalvin QA23]
Length = 498
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 223/388 (57%), Gaps = 57/388 (14%)
Query: 14 QSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPV 73
+S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +AL++ NVEP+
Sbjct: 4 ESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALRVLNVEPL 63
Query: 74 YGFASGGPLR----FRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAI 127
YG+ G + F + G + ++YLD+++V+F +I PLP+ P + HWLA+
Sbjct: 64 YGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAV 123
Query: 128 EGVQPVIPEN----------------------------APVQAIAAPSNGTN-------N 152
EGVQP I +N PV + A ++ T+ +
Sbjct: 124 EGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDNSLQTPVTSTTASASVTDTGASQHLS 183
Query: 153 EQKDGLPVEIKLPVKHILSRELQLYFDKI--TELAVSRSDSV---LFKQALVSLATDSGL 207
K G E+K VKH+LS+ELQ+YF+K+ T A S++D + + AL SL TDSGL
Sbjct: 184 NVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGL 243
Query: 208 HPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVA 267
H LVPYF F+A+++++ L++ LL ++ ++++LL N I ++PY+H LMPS++T L+A
Sbjct: 244 HQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLA 303
Query: 268 KRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 316
K+LG D+ + LRDF A L+ + K++ Y +L+ R+T+TLL L
Sbjct: 304 KKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFL 363
Query: 317 DPKRALTQHYGAVQGLAALGPNVVRLLL 344
D R +YG ++G++ L +R L
Sbjct: 364 DINRVFGTYYGCLKGVSVLEGESIRFFL 391
>gi|50287717|ref|XP_446288.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525595|emb|CAG59212.1| unnamed protein product [Candida glabrata]
Length = 534
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 226/406 (55%), Gaps = 66/406 (16%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV +A+S+G+ N + + ALA DVEYRI EI+++A+K RHS+R TLTTDDV +A
Sbjct: 28 PQDTVRDVAESLGLENVNEEVLKALAMDVEYRILEIIEQAVKFKRHSKRDTLTTDDVAKA 87
Query: 65 LKLRNVEPVYGFASGG----PLRFRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G L F + G + ++YLD+ +V+F +I PLP+ P
Sbjct: 88 LRVLNVEPLYGYHDGSHSNRELSFAKVNTAGGQSVYYLDEGEVDFDKLINEPLPQVPRVP 147
Query: 119 SIVCHWLAIEGVQPVIPEN----------------APVQAI----------AAPSNGTNN 152
+ HWLA+EGVQP I +N A V A+ + +NGT
Sbjct: 148 TFTTHWLAVEGVQPAIVQNPNLNDIRQSQPPIVRGAIVTALNESSSQLGGSSGSNNGTGK 207
Query: 153 EQ-----------------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV--- 192
+ G V++K VKH+LS+ELQ+YF++I +S
Sbjct: 208 GSVGGESVGGSGSNLASVVQPGQNVDVKPLVKHVLSKELQIYFNQIISTLTKHVESGDEE 267
Query: 193 ---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQ 249
+ AL+SL TD+GLH LVPYF F+A++++ L++ LL ++ ++++LL N I
Sbjct: 268 GQHMKGAALMSLKTDTGLHQLVPYFIQFIAEQITHNLSDLELLGTILEMMYSLLSNTSIF 327
Query: 250 IEPYLHQLMPSVVTCLVAKRLGN-----------RLADNHWELRDFTAKLVAAICKRYGH 298
++PY+H LMPSV+T L+ KRLG + +RDF A L+ I +++
Sbjct: 328 LDPYIHSLMPSVLTLLLTKRLGGTPEKDDEASAVEFLEKTNAVRDFAASLLDHILRKFPQ 387
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
VY +L+ R+T+TLL LD R+ +YG ++G++ L P +R L
Sbjct: 388 VYKSLKPRVTRTLLKTFLDTNRSFGTYYGCLRGVSVLEPESIRFFL 433
>gi|449676272|ref|XP_002168543.2| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Hydra magnipapillata]
Length = 496
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 242/429 (56%), Gaps = 53/429 (12%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E ++VI +S D LA ++ +++++++QEA+K S+R LT+ D+D +LK
Sbjct: 22 EIIKVIVESNSYDKPPDDVLQYLADNITFKVKKVIQEAVKFQNKSKRLKLTSRDIDHSLK 81
Query: 67 LRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
++NVEPVYGF+S + FR A G R++++ ++ +V+ +D+I LP+ PL+ +I HWL
Sbjct: 82 VQNVEPVYGFSSSDFVPFRNASGGGREVYFKEETEVDLEDIISQNLPKIPLEVTIKSHWL 141
Query: 126 AIEGVQPVIPENAP-----------VQAIAAPS----NGTNNEQKDGLPV---------- 160
AI+G+QP IPEN P A A P+ N T+ Q + +
Sbjct: 142 AIDGIQPAIPENPPPISKDMQMQEVASAFANPAVCEVNITDFSQDNKSQLKDIKTKDSKD 201
Query: 161 ---------------EIKL---PVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLA 202
EIK V H LS E QL++ +ITE V S+ V +AL SL+
Sbjct: 202 KKKVEDTKKLDFGKQEIKRFKPLVTHELSVEQQLFYKEITEACVG-SNEVKRTEALNSLS 260
Query: 203 TDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 260
D GL+ L+P FT F+A+ +V+ G +N +LL L+R++ L++N + IE YLH+L+P+
Sbjct: 261 NDPGLYQLLPRFTTFIAEGVKVNVGQHNLALLIYLLRMIKALMENSTLYIEKYLHELIPA 320
Query: 261 VVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPK 319
V+TC+V+K+L R DNHW LRDF A+L+A ICK + N +Q+R+TK L L K
Sbjct: 321 VITCVVSKQLCPRPDFDNHWALRDFAARLLAQICKHFTTPTNNIQSRVTKALCKTLFLDK 380
Query: 320 RALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGA 379
HYGAV GLA +G ++++L+P L E +++LE +N ++ A +
Sbjct: 381 APAASHYGAVAGLAEIGLEAIKVILIPRLKN-----ESDLILEAMENPSEKDAAEHLQAL 435
Query: 380 LLQAAGQCI 388
L++ A I
Sbjct: 436 LVKHASIAI 444
>gi|336264219|ref|XP_003346888.1| hypothetical protein SMAC_05148 [Sordaria macrospora k-hell]
gi|380090359|emb|CCC11935.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 516
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 236/411 (57%), Gaps = 49/411 (11%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V+ +A+SIGI N + + L DVEYRI +++ EA++ MR + RTTLT DV +AL+
Sbjct: 13 ENVKDVAESIGI-NLTEEPLRVLTQDVEYRIGQVVVEALRFMRAANRTTLTVQDVSQALR 71
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLR+ A IG + LFY++D++V+F+ VI APLP+ P D S HW
Sbjct: 72 VLDVEPLYGYDSTRPLRYGEASIGPGQPLFYIEDEEVDFEKVINAPLPKVPRDMSFTAHW 131
Query: 125 LAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLP-----------------VEIKLPVK 167
LAI+GVQP IP+N P+ G + KD LP V + VK
Sbjct: 132 LAIDGVQPSIPQN--------PTTGETS-SKDLLPKGPGANPAVAALAGNDNVAFRPAVK 182
Query: 168 HILSRELQLYFDKITELAVSRSD-----SVLFKQALVSLATDSGLHPLVPYFTYFVADEV 222
H++S+EL LYFDK+ + A+ D + L AL S+ +D GLH LVPYF F+ ++V
Sbjct: 183 HVISKELILYFDKV-QAAILDDDPDEEKTRLRSAALDSVRSDPGLHQLVPYFVSFINNQV 241
Query: 223 SRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD------ 276
+ L++ +L +M + +L+NP I ++PY L V+TCL+A++LG +
Sbjct: 242 THRLDDLFVLRQMMELTGAILENPSIFLDPYASSLAAPVLTCLMARKLGGSESSLEGTDA 301
Query: 277 --NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
+ + LR+ A L+ I ++Y L+ +LT+T L LDP ++ YGA+ GLAA
Sbjct: 302 LKDQYRLREVAASLLGTIARKYSKTNALLRPKLTRTCLKFFLDPSKSPAVLYGAISGLAA 361
Query: 335 L-GPNVVRLLLLPNLGPY-LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
GP VR+L+LPNL + +L P ++K E E + G +++A
Sbjct: 362 AGGPEAVRILVLPNLRMFDEGILTP----LREKGEASHFEYEALVGGIMKA 408
>gi|403160505|ref|XP_003320996.2| hypothetical protein PGTG_02038 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170276|gb|EFP76577.2| hypothetical protein PGTG_02038 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 562
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 221/368 (60%), Gaps = 30/368 (8%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
PK +V+ +A+S+G+ N S +AA ALA DVE+R+ ++++++IK MRHS+RT L +DVD A
Sbjct: 12 PKTSVKDVAESLGLGNLSDEAATALAADVEFRLTQLIEDSIKFMRHSKRTNLLVEDVDYA 71
Query: 65 LKLRNVEPVYGFASGGPLRFRR---AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
L+ +N+EP++GFAS L FRR A+G +L+++D+++++ V+ A LP P + S
Sbjct: 72 LRAKNIEPLWGFASTDTLSFRRTTSAVG--NLYFIDEEEIDLTKVLTAELPPIPQEASYT 129
Query: 122 CHWLAIEGVQPVIPEN------------APVQAIAAPSNGTNNEQKDGLPVEIKLPVKHI 169
HWLA+EGVQP IP+N + +Q+ A PS+ P L K
Sbjct: 130 AHWLAVEGVQPAIPQNPTPAELKSHPAFSGLQSSAIPSSSKQ------APETKNLTTKEH 183
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN- 228
LSREL+LYFD++T A+S +D AL SL+ D GLH LVPY F A++++ L++
Sbjct: 184 LSRELRLYFDRVTAAALS-NDQSSRNAALASLSGDPGLHQLVPYLIQFAAEKITTTLSHT 242
Query: 229 ---YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHW--ELRD 283
L +++++ ++L NPH +EPYLHQ++PS++TCL++ + + E+R
Sbjct: 243 EPSLEHLRDVLQILESILSNPHSYLEPYLHQILPSILTCLLSSSFPSSPVTDELEREIRC 302
Query: 284 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 343
L+ + RY H Y TL+TR+ KTL +L+DP+ GA+ G+ LG + +
Sbjct: 303 TAGSLLKSQLNRYQHSYPTLRTRILKTLTKSLIDPQSTDRNQLGAIIGVKYLGLEPTKTV 362
Query: 344 LLPNLGPY 351
L N+ +
Sbjct: 363 LSQNIKAF 370
>gi|340375218|ref|XP_003386133.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Amphimedon queenslandica]
Length = 593
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 220/376 (58%), Gaps = 32/376 (8%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
++ ++++V+A+SIGISN + D L+ ++E+R++EI+Q IK MRHS+R L+ D+D
Sbjct: 14 LMSTDSIKVMAESIGISNLNEDVCKRLSEEMEFRLKEIVQNGIKFMRHSKRNRLSCGDID 73
Query: 63 EALKLRNVEPVYGFASGG--PLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
AL+ +N+EP+YGF PLR G ++++Y DD++V+ ++ +PLP+ P D S+
Sbjct: 74 NALRSKNIEPLYGFECSEYIPLRHSSG-GGKEIYYPDDQEVDLVSIVSSPLPKLPCDVSL 132
Query: 121 VCHWLAIEGVQPVIPENAPV-----QAIAAPSNGTNNEQKDGLPVEIKLPVK-------- 167
HWLA++GVQP++PEN P Q A + N++ +P +++L K
Sbjct: 133 HSHWLAVDGVQPLVPENVPSLSLEEQRKQAVALSLNSQDASLVPKDVRLERKRKKEEEGV 192
Query: 168 -----------HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTY 216
H+L+ E QLY+ ++T+ V SDS ++ L SL+TD ++ L+P
Sbjct: 193 VEVVKLKSLQPHLLTMEQQLYYKELTDACVGLSDSK-RQEGLTSLSTDPSVYQLLPQLIT 251
Query: 217 FVAD--EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR- 273
F+ + +V+ G + L L+++V LL N I IE YLH L+PSV TCL+ + L R
Sbjct: 252 FMTEGIKVNIGQRKLASLRNLLKMVKALLDNTSISIERYLHDLIPSVSTCLLNRHLCTRP 311
Query: 274 LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPK-RALTQHYGAVQGL 332
+++HW LR+ +AK+++ ICKRY + N +QTRLT+ L L + L HYGAV
Sbjct: 312 ESEDHWSLRELSAKILSMICKRYSNSVNNIQTRLTRILSQTLQGLTLQELASHYGAVACF 371
Query: 333 AALGPNVVRLLLLPNL 348
LG + ++P L
Sbjct: 372 GELGQEAISACVIPRL 387
>gi|406866430|gb|EKD19470.1| transcription initiation factor TFIID complex 60 kDa subunit
[Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 459
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 222/384 (57%), Gaps = 32/384 (8%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ + +A+S+GIS + DA LA +VEYR+ +++ EA++ M +RT L T D+ +ALK
Sbjct: 11 DNIRDVAESVGISALNEDAVRTLANEVEYRLSQVIVEAMRFMHQGKRTVLGTQDISQALK 70
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLRF A +G + L+Y++D++V+F+ +I APLP+ P D S HW
Sbjct: 71 VLDVEPLYGYESTRPLRFGEASLGPGQPLYYIEDEEVDFEKLINAPLPKVPRDVSFTAHW 130
Query: 125 LAIEGVQPVIPEN-----APVQAIAAPSNGTN--------NEQKDGLPVEIKLPVKHILS 171
LA+EGVQP+IP+N A A A G N N+ G P+ VKHI+S
Sbjct: 131 LAVEGVQPLIPQNPSTAEARADASVAKGPGANPTLAALAGNDNVPGKPL-----VKHIVS 185
Query: 172 RELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPYFTYFVADEVSRGLN 227
+E+ L+FDKI + S + VL + A S+ +D GL LVPYF FVA++V+ L
Sbjct: 186 KEMILFFDKIKAAILDESLDPEVVLLRNTAFQSVRSDPGLAQLVPYFLQFVAEKVTHSLG 245
Query: 228 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA--DNHWELRDFT 285
N +L ++ + +++N +PY L +VTC++ + LG A + +E+RD
Sbjct: 246 NLFVLRQMIELTQAVIENKSHYADPYALSLTAPIVTCIIGRNLGGEAAHLKDQYEVRDLA 305
Query: 286 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLL 344
L+ + ++Y L+ +LT+T L LDP + L HYGA+ GLA + GPN + L+
Sbjct: 306 VSLLGQVVRKYSTSSTMLKAKLTRTFLKNFLDPAKPLDVHYGAMCGLATVGGPNAISALI 365
Query: 345 LPNLGPYLSLLEPEMLLEKQKNEV 368
LP L Y E +L + +NE+
Sbjct: 366 LPTLKKY-----DEEILSRAQNEL 384
>gi|198427195|ref|XP_002127739.1| PREDICTED: similar to Transcription initiation factor TFIID subunit
6 (Transcription initiation factor TFIID 70 kDa subunit)
(TAF(II)70) (TAFII-70) (TAFII-80) (TAFII80) (p80) [Ciona
intestinalis]
Length = 557
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 235/419 (56%), Gaps = 41/419 (9%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+TV+ I ++ GI A L+ + +R++EI+Q+A+K H + LT D+D LK
Sbjct: 24 DTVKAIGETAGILQLPDHATKYLSEETTFRLKEIIQDAVKFCSHRKSNKLTCQDIDNTLK 83
Query: 67 LRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
+N EP+YGF S + FR A G R+L ++++K+++ D+I LP+ P D ++ HWL
Sbjct: 84 SKNQEPLYGFISDEFIPFRFASGGGRELHFIEEKELDLNDIINGVLPKIPHDVAMKAHWL 143
Query: 126 AIEGVQPVIPEN---------------------APVQAIAAPSNGTNN------EQKDGL 158
AIEGVQP +PEN V A+ + + NN + +
Sbjct: 144 AIEGVQPSVPENPVPETHFSIDVLKKPEVKNVRTGVDALKSCTVPNNNPLTSAKKPESSS 203
Query: 159 PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV 218
V +K H LS E QLY+ +ITE AV S++ +AL SLATD GL ++P F+ FV
Sbjct: 204 LVPLKARFTHELSVEQQLYYKEITEAAVGSSEARR-AEALQSLATDPGLSQMLPRFSTFV 262
Query: 219 ADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LA 275
++ V + NN +LL LMR+V L+ N + +E YLH+++P+V+TC+V+++L R
Sbjct: 263 SEGVRVNVVQNNLALLIYLMRMVKALMDNSTLNLEKYLHEMIPAVMTCIVSRQLCTRPDV 322
Query: 276 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 335
DNHW LRD+ A+L+A +C+ + N +Q+R+T T L D K +L YG+V GLA L
Sbjct: 323 DNHWALRDYAARLMAQVCRSFSTSTNLIQSRITGTFCKCLHDDKSSLAARYGSVAGLAEL 382
Query: 336 GPNVVRLLLLPNL---GPYL-SLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYD 390
G +VV+ L LP L G + ++LE +L N + R A + G L++ G I +
Sbjct: 383 GTDVVQSLALPRLQVEGERIKNILESPLL-----NPIDRTAAEHLRGLLVKHCGPVIKN 436
>gi|85090715|ref|XP_958550.1| hypothetical protein NCU07757 [Neurospora crassa OR74A]
gi|28919921|gb|EAA29314.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 465
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 153/402 (38%), Positives = 232/402 (57%), Gaps = 31/402 (7%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V+ +A+SIGI N + + L DVEYRI +++ EA++ MR + RTTLT DV +AL+
Sbjct: 13 ENVKDVAESIGI-NLTEEPLRVLTQDVEYRIGQVVVEALRFMRAANRTTLTVQDVSQALR 71
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLR+ A IG + LFY++D++V+F+ VI APLP+ P D S HW
Sbjct: 72 VLDVEPLYGYDSTRPLRYGEASIGPGQPLFYIEDEEVDFEKVINAPLPKVPRDMSFTAHW 131
Query: 125 LAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLP----VEIKLPVKHILSRELQL 176
LAI+GVQP IP+N ++ P N L V + VKH++S+EL L
Sbjct: 132 LAIDGVQPSIPQNPTTAETSSKDLLPKGPGANPAVAALAGNDNVAFRPAVKHVISKELIL 191
Query: 177 YFDKITELAVSRSD-----SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 231
YFDK+ + A+ D + L AL S+ +D GLH LVPYF F+ ++V+ L++ +
Sbjct: 192 YFDKV-QAAIMDDDPDEEKTRLRSAALDSVRSDPGLHQLVPYFVSFINNQVTHRLDDLFV 250
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD--------NHWELRD 283
L +M + +L NP I ++PY L V+TCL+A++LG + + + LR+
Sbjct: 251 LRQMMELTGAILDNPSIFLDPYASSLAAPVLTCLMARKLGGSESSLEGTDALKDQYRLRE 310
Query: 284 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRL 342
A L+ I ++Y L+ +LT+T L LDP ++ YGA+ GLAA GP VR+
Sbjct: 311 VAASLLGTIARKYSKTNALLRPKLTRTCLKFFLDPSKSPAVLYGAISGLAAAGGPEAVRI 370
Query: 343 LLLPNLGPY-LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
L+LPNL + +L P ++K E E + G +++A
Sbjct: 371 LVLPNLKMFDEGILTP----LREKGEASHFEYEALVGGIMKA 408
>gi|336473445|gb|EGO61605.1| hypothetical protein NEUTE1DRAFT_128140 [Neurospora tetrasperma
FGSC 2508]
gi|350293266|gb|EGZ74351.1| DUF1546-domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 536
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 153/402 (38%), Positives = 232/402 (57%), Gaps = 31/402 (7%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V+ +A+SIGI N + + L DVEYRI +++ EA++ MR + RTTLT DV +AL+
Sbjct: 84 ENVKDVAESIGI-NLTEEPLRVLTQDVEYRIGQVVVEALRFMRAANRTTLTVQDVSQALR 142
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLR+ A IG + LFY++D++V+F+ VI APLP+ P D S HW
Sbjct: 143 VLDVEPLYGYDSTRPLRYGEASIGPGQPLFYIEDEEVDFEKVINAPLPKVPRDMSFTAHW 202
Query: 125 LAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLP----VEIKLPVKHILSRELQL 176
LAI+GVQP IP+N ++ P N L V + VKH++S+EL L
Sbjct: 203 LAIDGVQPSIPQNPTTAETSSKDLLPKGPGANPAVAALAGNDNVAFRPAVKHVISKELIL 262
Query: 177 YFDKITELAVSRSD-----SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 231
YFDK+ + A+ D + L AL S+ +D GLH LVPYF F+ ++V+ L++ +
Sbjct: 263 YFDKV-QAAIMDDDPDEEKTRLRSAALDSVRSDPGLHQLVPYFVSFINNQVTHRLDDLFV 321
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD--------NHWELRD 283
L +M + +L NP I ++PY L V+TCL+A++LG + + + LR+
Sbjct: 322 LRQMMELTGAILDNPSIFLDPYASSLAAPVLTCLMARKLGGSESSLEGTDALKDQYRLRE 381
Query: 284 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRL 342
A L+ I ++Y L+ +LT+T L LDP ++ YGA+ GLAA GP VR+
Sbjct: 382 VAASLLGTIARKYSKTNALLRPKLTRTCLKFFLDPSKSPAVLYGAISGLAAAGGPEAVRI 441
Query: 343 LLLPNLGPY-LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
L+LPNL + +L P ++K E E + G +++A
Sbjct: 442 LVLPNLKMFDEGILTP----LREKGEASHFEYEALVGGIMKA 479
>gi|451854028|gb|EMD67321.1| hypothetical protein COCSADRAFT_34148 [Cochliobolus sativus ND90Pr]
Length = 476
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 231/405 (57%), Gaps = 49/405 (12%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V +A+S+GI++ + + LA DV++R+ ++++EA+K MRH +RTTL+T D+ ALK
Sbjct: 8 DNVRDVAESVGIASLADNVVEELARDVDFRLAQVLEEALKFMRHGKRTTLSTQDISNALK 67
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ NVEP+YG+ S PLRF A +G + L+Y++D++V+F+ +I APLP+ P + + HW
Sbjct: 68 VLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPREITFTAHW 127
Query: 125 LAIEGVQPVIPENA--------PVQAIAAP----SNGTNNEQKDGLPVEIKLPVKHILSR 172
LA+EGVQP IP+N P A P +NG +N V +K VKH+LS+
Sbjct: 128 LAVEGVQPSIPQNPNTNTGDLLPKGPNANPHLAAANGLDN-------VNVKPLVKHVLSK 180
Query: 173 ELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLL 232
E Q F+K++ V ++ AL +++T+ G+H L Y F+A++V+ + N +L
Sbjct: 181 ESQELFNKLSGALVDETNIEWQNAALAAISTEPGIHQLTTYLLSFIAEKVTHNMKNLFIL 240
Query: 233 FALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--------------------- 271
+MR LL N I ++PY+ ++P ++TC + +LG
Sbjct: 241 SQMMRASEALLNNQAIYLDPYIAYMVPPILTCCIGGKLGPANQPAPSNASSETLGGAVPD 300
Query: 272 -NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQ 330
+R A + + LR A L+ IC++Y L++R+ +T L +DP + + H+GA+Q
Sbjct: 301 YSRAASDAFYLRTLAAHLLRNICRKYSSSNQGLKSRIARTCLKQFMDPDKTVGAHFGALQ 360
Query: 331 G-LAALGP-NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEA 373
L LGP + +R L+LPN+ Y + L +K +EV RH+A
Sbjct: 361 ALLLVLGPSDALRGLILPNIKMY----SEDFLAKKLADEVTRHDA 401
>gi|310800694|gb|EFQ35587.1| TATA box binding protein associated factor [Glomerella graminicola
M1.001]
Length = 461
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 242/437 (55%), Gaps = 24/437 (5%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V +A+S+GI+N + DA L DVEYRI +++ EA++ MR SRRTTLT +D+ ALK
Sbjct: 14 DNVRDVAESVGITNLNDDALRCLTQDVEYRIGQVLVEALRFMRASRRTTLTVNDISTALK 73
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
N+EP+YG+ S PLR+ A +G + LFY++D++V+F+ +I APLP+ P D S HW
Sbjct: 74 ALNIEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMSFTAHW 133
Query: 125 LAIEGVQPVIPENAPV-----QAIAAPSNGTN---NEQKDGLPVEIKLPVKHILSRELQL 176
LAIEGVQP IP+N Q + G N V + VKH++S+EL L
Sbjct: 134 LAIEGVQPSIPQNPTTAESRSQELVPKGPGANPALAALAGNDSVSFRPAVKHVVSKELIL 193
Query: 177 YFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLL 232
YF+K+ + + + V +Q AL S+ D GLH L+PYF FVA++V+ L++ L
Sbjct: 194 YFEKVQNALLDDNPDEEVVRLRQAALESVRDDPGLHQLIPYFINFVANQVTHRLDDVFTL 253
Query: 233 FALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN----HWELRDFTAKL 288
M + L+ N + ++PY + + V+TC++ +++G A + ++LR+F+A L
Sbjct: 254 RQAMELTAALIANTKLYLDPYANAIAAPVLTCILGRKIGGDDAADAMREQYQLREFSASL 313
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPN 347
+ I ++Y N L+ +L +T L +DP + H+GA+ G+AA GP VR+L+L
Sbjct: 314 LGQIARKYAASNNLLRPKLVRTCLKFFMDPDKPPATHFGAITGVAAAGGPEAVRVLVLKC 373
Query: 348 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 407
L Y + +L+ K++ + E + G +L+A D ++
Sbjct: 374 LRAY-----HDNILQPLKDKGEGVEFEMLVGGILKAIATMTEDDRATVNGINGTGGNYAA 428
Query: 408 KTNGIVATLSNKRKTSM 424
+ N + + +R SM
Sbjct: 429 ELNEFIGPILGERLNSM 445
>gi|330916461|ref|XP_003297422.1| hypothetical protein PTT_07833 [Pyrenophora teres f. teres 0-1]
gi|311329873|gb|EFQ94469.1| hypothetical protein PTT_07833 [Pyrenophora teres f. teres 0-1]
Length = 476
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 257/473 (54%), Gaps = 53/473 (11%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V +A+S+GI++ + + LA DV++R+ ++++EA+K MRH +RTTL+T D+ ALK
Sbjct: 8 DNVRDVAESVGIASLADNVVEELARDVDFRLAQVLEEALKFMRHGKRTTLSTQDISNALK 67
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ NVEP+YG+ S PLRF A +G + L+Y++D++V+F+ +I APLP+ P + + HW
Sbjct: 68 VLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPREITFTAHW 127
Query: 125 LAIEGVQPVIPENAPVQAIAAPSNGTNNE----QKDGLP-VEIKLPVKHILSRELQLYFD 179
LA+EGVQP IP+N G N +GL V +K VKH+LS+E Q F+
Sbjct: 128 LAVEGVQPSIPQNPNTNTADLLPKGPNANPHLAAANGLDNVNVKPLVKHVLSKESQELFN 187
Query: 180 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 239
K++ + ++ AL +++T+ G+H L Y F+A++V+ + N +L +MR
Sbjct: 188 KLSGALIDETNIEWQNAALAAISTEPGIHQLTTYLLSFIAEKVTHNMKNLFILSQMMRAA 247
Query: 240 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG----------------------NRLADN 277
LL+N I ++PY+ ++P ++TC + +LG +R A +
Sbjct: 248 EALLRNQAIYLDPYVAYMVPPILTCCIGGKLGPTSHQVPSNASSETLNGTAPDYSRAAQD 307
Query: 278 HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG-LAALG 336
+ LR A L+ IC+++ L+TR+ +T L +DP++++ H+GA+Q L LG
Sbjct: 308 AFYLRTLAAHLLKDICRKHSTSNQGLKTRIARTCLKQFMDPEKSVGTHFGALQALLLVLG 367
Query: 337 P-NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL------------QA 383
P + +R L+LPN + L + L +K ++ RH+A + L+ +
Sbjct: 368 PGDALRGLILPN----IKLYNDDFLAKKLADDGTRHDAEILLQVLVGSFPALVPKSVRER 423
Query: 384 AGQCIYDRLKIFPPLSSLPARSVWKTNGIVA--TLSNKRKTSMDLEEQPPLKK 434
A + + P L L R V K IVA +SNK M LE Q L+K
Sbjct: 424 ADKAKSEGTYAAPNLEELRERLVDKVGDIVAGRIISNK----MHLEAQEILRK 472
>gi|367024929|ref|XP_003661749.1| TAF6-like protein [Myceliophthora thermophila ATCC 42464]
gi|347009017|gb|AEO56504.1| TAF6-like protein [Myceliophthora thermophila ATCC 42464]
Length = 468
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 236/402 (58%), Gaps = 31/402 (7%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V +A SIGIS + + LA DVEYRI +++ E+++ MR + RTTLT DV ALK
Sbjct: 14 DNVRDVADSIGIS-LADEPLRVLAQDVEYRIGQVIVESLRFMRAANRTTLTVQDVSLALK 72
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLR+ A +G + LFY+DD++V+F+ VI APLP+ P D S HW
Sbjct: 73 VLDVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEVDFEKVINAPLPKVPRDMSFTAHW 132
Query: 125 LAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLP----VEIKLPVKHILSRELQL 176
LAIEGVQP IP+N ++ P N L V + VKH++S+EL L
Sbjct: 133 LAIEGVQPSIPQNPTTAETSSKELLPKGPGANPALAALAGNDNVSFRPSVKHVISKELIL 192
Query: 177 YFDKITELAVSRSD-----SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 231
YFDKI + A+ D + L + AL S+ +DSGLH L+PYF F+ ++V+ L++ +
Sbjct: 193 YFDKI-QAAILDDDPDEEKTRLREAALESVRSDSGLHQLLPYFVNFITNQVTHHLDDLFI 251
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN--------HWELRD 283
L +M + ++QNP++ ++PY L ++TCL+++RLG + + + LR+
Sbjct: 252 LRQMMELAEAVIQNPNLFLDPYASALSAPILTCLMSRRLGGAASADEGSDTLREQYSLRE 311
Query: 284 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRL 342
A L+ + ++YG L+ +LT+T L LDP R +GA++G+AA GP VR+
Sbjct: 312 LAASLLEMVARKYGATNALLRPKLTRTCLKHFLDPTRPPAVLFGAIRGVAASGGPEAVRV 371
Query: 343 LLLPNLGPY-LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
L+LP+L + ++L+P +K E E + G +++A
Sbjct: 372 LVLPSLKSFDGAVLQP----LSEKGEAHAMELEMLVGGIMKA 409
>gi|429861438|gb|ELA36127.1| transcription initiation factor tfiid complex 60 kda subunit
[Colletotrichum gloeosporioides Nara gc5]
Length = 461
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 222/371 (59%), Gaps = 20/371 (5%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V+ +A+S+GI N + +A L DVEYRI +++ EA++ MR +RRTTLT +D+ ALK
Sbjct: 14 DNVKDVAESVGIPNLNDEALRCLTQDVEYRIGQVLVEALRFMRAARRTTLTVNDISTALK 73
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ N+EP+YG+ S PLRF A +G + LFY++D++V+F+ +I APLP+ P D S HW
Sbjct: 74 VLNIEPLYGYDSTRPLRFGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMSFTAHW 133
Query: 125 LAIEGVQPVIPENAPV-----QAIAAPSNGTN---NEQKDGLPVEIKLPVKHILSRELQL 176
LAIEGVQP IP+N Q + G N + + VKH++S+EL L
Sbjct: 134 LAIEGVQPSIPQNPTTAESRSQELVPKGPGANPALAALAGNDSISFRPAVKHVVSKELIL 193
Query: 177 YFDKITELAVSRSD----SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLL 232
YF+K+ + + L + AL S+ D GLH L+PYF FVA++V+ L++ +L
Sbjct: 194 YFEKVQNAILDDNPDEEVGRLRQAALASVRDDPGLHQLIPYFINFVANQVTHRLDDVFIL 253
Query: 233 FALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN----HWELRDFTAKL 288
M + L+QN + ++PY + + V+TC++++++G + ++LR+F+A L
Sbjct: 254 RQSMELTLALIQNKKLFLDPYANSIAAPVLTCILSRKIGAEDGSDAVKEQYKLREFSASL 313
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA-ALGPNVVRLLLLPN 347
+ I ++Y N L+ +L +T L +DP + H+GA+ G+A A GP VR+L+L
Sbjct: 314 LGEIARKYSASNNLLRPKLVRTCLKFFMDPDKPPAAHFGAISGVASAGGPEAVRVLVLKC 373
Query: 348 LGPYL-SLLEP 357
L Y ++L+P
Sbjct: 374 LRAYHDNILQP 384
>gi|451999943|gb|EMD92405.1| hypothetical protein COCHEDRAFT_1174311 [Cochliobolus
heterostrophus C5]
Length = 476
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 227/398 (57%), Gaps = 35/398 (8%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V +A+S+GI++ + + LA DV++R+ ++++EA+K MRH +RTTL+T D+ ALK
Sbjct: 8 DNVRDVAESVGIASLADNVVEELARDVDFRLAQVLEEALKFMRHGKRTTLSTQDISNALK 67
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ NVEP+YG+ S PLRF A +G + L+Y++D++V+F+ +I APLP+ P + + HW
Sbjct: 68 VLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPREITFTAHW 127
Query: 125 LAIEGVQPVIPENAPVQAIAAPSNGTNNE----QKDGLP-VEIKLPVKHILSRELQLYFD 179
LA+EGVQP IP+N G N +GL V +K VKH+LS+E Q F+
Sbjct: 128 LAVEGVQPSIPQNPNTNTADLLPKGPNANPHLAAANGLDNVNVKPLVKHVLSKESQELFN 187
Query: 180 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 239
K++ V ++ AL +++T+ G+H L Y F+A++V+ + N +L +MR
Sbjct: 188 KLSGALVDETNIEWQNAALAAISTEPGIHQLTTYLLSFIAEKVTHNMKNLFILSQMMRAS 247
Query: 240 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG----------------------NRLADN 277
LL N I ++PY+ ++P ++TC + +LG +R A +
Sbjct: 248 EALLNNQAIYLDPYIAYMVPPILTCCIGGKLGPANQTAPSNASSETLGGAVPDYSRAASD 307
Query: 278 HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG-LAALG 336
+ LR A L+ IC++Y L++R+ +T L +DP + + H+GA+Q L LG
Sbjct: 308 AFYLRTLAAHLLRNICRKYSSSNQGLKSRIARTCLKQFMDPDKTVGAHFGALQALLLVLG 367
Query: 337 P-NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEA 373
P + +R L+LPN+ Y + L +K +E RH+A
Sbjct: 368 PSDALRGLILPNIKMY----SEDFLAKKLADEGTRHDA 401
>gi|412986365|emb|CCO14791.1| predicted protein [Bathycoccus prasinos]
Length = 647
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 209/401 (52%), Gaps = 66/401 (16%)
Query: 8 TVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKL 67
+++ IA++ G S D A A APDVEYR+R+I+QEA+KC + SRR LTT+D++ AL++
Sbjct: 16 SIQTIAEAFGFV-ISDDVAKAFAPDVEYRLRDIIQEALKCTKRSRRNVLTTEDINAALRI 74
Query: 68 RNVEPVYGFASGGPLR-FRRAIGYRDLFYLDDKDVEFKDVIEAPLP-------------- 112
R EP+YGF S P + F + G D+FY D++++ ++ PLP
Sbjct: 75 RMCEPLYGFPSNMPSQEFVKVKGTNDVFYTYDEELDVNKLLSEPLPPPSIAINVVPHWLA 134
Query: 113 ----------RAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAP------------SNGT 150
LD+ I A E + + A + P
Sbjct: 135 IDGVQPLIPENPSLDSQIYYQERAKEREETLAKAKAKKPTVTGPPPLPSATEGGEKGGDE 194
Query: 151 NNEQKDG-----------------LPVEIKLPVKHILSRELQLYFDKITEL-----AVSR 188
E+K+G PV V+H+LSRELQ+YFD+IT L +
Sbjct: 195 AGEKKEGDAQQHLQQQQQKEQGKFAPV-----VQHVLSRELQVYFDRITALLRGGGGAND 249
Query: 189 SDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHI 248
+ L A+ +L TD+GL L+PYF F++ EV L N L A+MR + L+QNP
Sbjct: 250 EERGLLNAAIGTLQTDAGLANLIPYFAKFISTEVQTNLRNLRKLLAMMRAIEALVQNPTA 309
Query: 249 QIEPYLHQLMPSVVTCLVAKRLG-NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRL 307
+E YLHQLMPSV+TC+VAKRL N DNHW+LR +K VA IC+ YG Y TLQ R+
Sbjct: 310 NLELYLHQLMPSVLTCIVAKRLSENPEKDNHWQLRVLASKTVAEICECYGEEYATLQPRV 369
Query: 308 TKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
T TL L + L +GA+ GL++LGP V+ ++ P L
Sbjct: 370 TATLQKGLKATQSPLPTIFGALVGLSSLGPRVIETVVCPEL 410
>gi|260796579|ref|XP_002593282.1| hypothetical protein BRAFLDRAFT_83827 [Branchiostoma floridae]
gi|229278506|gb|EEN49293.1| hypothetical protein BRAFLDRAFT_83827 [Branchiostoma floridae]
Length = 653
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 214/376 (56%), Gaps = 53/376 (14%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M V E+++VIA+S+GI +AA ALA D YR+++I QEA+K M H +R L+T D
Sbjct: 6 MPDVTAESIKVIAESVGIGQLPDEAAAALAEDATYRLKQITQEAVKFMHHGKRRKLSTAD 65
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 119
D ALKL+NVEP+YGF + + FR A G R+L + ++K+VE D+I APLPR PLD +
Sbjct: 66 FDNALKLKNVEPLYGFHAEEHIPFRFASGGGRELHFYEEKEVELGDIINAPLPRIPLDVN 125
Query: 120 IVCHWLAIEGVQPVIPENAP---------------VQAIAAPSNGTNNEQK------DGL 158
+ HWLAIEGVQP IPEN P V A +GT K GL
Sbjct: 126 LKAHWLAIEGVQPSIPENPPPVPKEDQHAADRPPGVTAKPPGKDGTKPAGKPGKAEVKGL 185
Query: 159 P-----VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPY 213
P V++K + H LS E QLY+ +ITE V +S ++A+
Sbjct: 186 PSEVAGVKLKPVLTHELSVEQQLYYREITEACVGSCES---RRAV--------------- 227
Query: 214 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 273
V+ +N +LL LMR+V L+ N + +E YLH+++P+V TC+++K+L R
Sbjct: 228 -------RVNVVQSNLALLIYLMRMVKALMDNTTLHLEKYLHEVIPAVATCILSKQLCQR 280
Query: 274 L-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGL 332
DNHW LRDF A+L+ +C+ + N +Q+R+TKT L D + L YGA+ GL
Sbjct: 281 PDVDNHWALRDFAARLMGNMCRNFSSNINNIQSRMTKTYTKILHDEQSHLATRYGALAGL 340
Query: 333 AALGPNVVRLLLLPNL 348
A +G +VV+ LL+P L
Sbjct: 341 AEMGHDVVKSLLIPKL 356
>gi|358388344|gb|EHK25937.1| hypothetical protein TRIVIDRAFT_63275 [Trichoderma virens Gv29-8]
Length = 468
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 233/408 (57%), Gaps = 41/408 (10%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V+ +A+S+GI + S +A AL DVEYRI +++ EA++ MR +RRTT+T +DV ALK
Sbjct: 13 ENVKDVAESVGIGSMSDEALKALTQDVEYRIGQVIIEALRLMRAARRTTMTVNDVSMALK 72
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ + EP+YG+ S PLR+ A +G + LFY++D++V+F+ +I APLPR P D + HW
Sbjct: 73 VLDAEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPRVPRDMNFTAHW 132
Query: 125 LAIEGVQPVIPENAPVQAIAAPSN------GTN--------NEQKDGLPVEIKLPVKHIL 170
LAIEGVQP IP+N P A P + G N N+ G P VKHI+
Sbjct: 133 LAIEGVQPSIPQN-PTSAELRPQDLLPKGPGANPALSALAGNDAASGQP-----SVKHIV 186
Query: 171 SRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPYFTYFVADEVSRGL 226
S+EL LYFDKI + + + + +Q AL S+ D GLH LVPYF F+ D V+ L
Sbjct: 187 SKELILYFDKIQAAILDDNPDEEVIRLRQAALGSVRDDPGLHQLVPYFINFIMDRVTHQL 246
Query: 227 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN----HWELR 282
++ L +M + L++N + ++PY L V+TCL+A++LG + ++LR
Sbjct: 247 DDTFTLKQMMELTNALIENKSLFLDPYASSLSAPVLTCLMARKLGTEDGQDSLKEQYDLR 306
Query: 283 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG-LAALGPNVVR 341
A L+ I ++Y + L+ +LT+T L LDP + YGA+ G L A G +R
Sbjct: 307 QLAASLLGRIARKYSASNSLLRPKLTRTCLKYFLDPTKPPAVLYGAIHGLLEAGGMEAIR 366
Query: 342 LLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCI 388
+L+L NL + S +L+P L EK + ++ Y L+Q Q +
Sbjct: 367 VLVLRNLKSFDSGILQP--LKEKSEGSIE-------YEMLVQGLVQAV 405
>gi|400594744|gb|EJP62577.1| TATA box binding protein associated factor [Beauveria bassiana
ARSEF 2860]
Length = 462
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 160/413 (38%), Positives = 232/413 (56%), Gaps = 36/413 (8%)
Query: 2 SIVPK-----ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTL 56
S VPK E ++ +A+S+GI + +A ALA DVEYR+ +++ E+++ MR +RRTTL
Sbjct: 3 SEVPKLLWNAENIKDVAESVGIGALNEEATKALAQDVEYRVGQVIIESLRLMRAARRTTL 62
Query: 57 TTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRA 114
T +DV AL++ + EP+YG+ S PLRF A +G + LFY+DD++VEF+ +I APLP+
Sbjct: 63 TVNDVSLALRVLDAEPLYGYDSTRPLRFGEASLGPGQPLFYIDDEEVEFEKLINAPLPKV 122
Query: 115 PLDTSIVCHWLAIEGVQPVIPENAPVQAIAA-----PSNGTNNEQKDGLPVEIKLP---- 165
P D + HWLAIEGVQP IP+N P A + P N L P
Sbjct: 123 PRDMNFTAHWLAIEGVQPSIPQN-PTTAESRSQDLLPKGTGANPALSALAGNDSSPSNPS 181
Query: 166 VKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPYFTYFVADE 221
VKHI+S+EL LYFDKI + + + V +Q AL S+ D GLH L PYF F+ D
Sbjct: 182 VKHIVSKELILYFDKIQAAILDETPDEEVVRLRQAALGSVRDDPGLHQLAPYFINFIMDR 241
Query: 222 VSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN----RLADN 277
V+ L++ L +M + L++N + ++PY L V+TCL+A++LG+
Sbjct: 242 VTHQLDDTFTLKQMMELTNALIENKTLFLDPYASSLSAPVLTCLMARKLGSDDGVDAMKE 301
Query: 278 HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG-LAALG 336
+ELR A L+ + +Y L+ +LT+T L LDP + YGAV G L A G
Sbjct: 302 QYELRQLAASLIGRMAHKYSASNALLRPKLTRTCLRYFLDPTKPPAVLYGAVNGILEAGG 361
Query: 337 PNVVRLLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCI 388
P VRLL+L NL + S +L+P L EK + ++ Y L+Q Q +
Sbjct: 362 PEAVRLLILRNLKSFDSGILQP--LKEKSEGSIE-------YEMLVQGLVQAV 405
>gi|189209772|ref|XP_001941218.1| TATA-binding protein-associated-factor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187977311|gb|EDU43937.1| TATA-binding protein-associated-factor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 476
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 256/473 (54%), Gaps = 53/473 (11%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V +A+S+GI++ + + LA DV++R+ ++++EA+K MRH +RTTL+T D+ ALK
Sbjct: 8 DNVRDVAESVGIASLADNVVEELARDVDFRLAQVLEEALKFMRHGKRTTLSTQDISNALK 67
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ NVEP+YG+ S PLRF A +G + L+Y++D++V+F+ +I APLP+ P + + HW
Sbjct: 68 VLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPREITFTAHW 127
Query: 125 LAIEGVQPVIPENAPVQAIAAPSNGTNNE----QKDGLP-VEIKLPVKHILSRELQLYFD 179
LA+EGVQP IP+N G N +GL V +K VKH+LS+E Q F+
Sbjct: 128 LAVEGVQPSIPQNPNTNTADLLPKGPNANPHLAAANGLDNVNVKPLVKHVLSKESQELFN 187
Query: 180 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 239
K++ + ++ AL +++T+ G+H L Y F+A++V+ + N +L +MR
Sbjct: 188 KLSGALIDETNIEWQNAALAAISTEPGIHQLTTYLLSFIAEKVTHNMKNLFILSQMMRAA 247
Query: 240 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG----------------------NRLADN 277
LL+N I ++PY+ ++P ++TC + +LG +R A +
Sbjct: 248 EALLKNQAIYLDPYVAYMVPPILTCCIGGKLGPTSHQVPSNASSETLNGTAPDYSRAAQD 307
Query: 278 HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG-LAALG 336
+ LR A L+ IC+++ L++R+ +T L +DP++++ H+GA+Q L LG
Sbjct: 308 AFYLRTLAAHLLKDICRKHSTSNQGLKSRIARTCLKQFMDPEKSVGTHFGALQALLLVLG 367
Query: 337 P-NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEA----WRVYGALLQAAGQCIYDR 391
P + +R L+LPN+ Y + L +K ++ RH+A + G+ + I +R
Sbjct: 368 PGDALRGLILPNIKLY----NDDFLAKKLADDGTRHDADILLQVLVGSFPALVPKSIRER 423
Query: 392 LK--------IFPPLSSLPARSVWKTNGIVA--TLSNKRKTSMDLEEQPPLKK 434
P L L R K IVA +SNK M LE Q L+K
Sbjct: 424 ADKAKSEGNYAAPNLEDLRERLSDKVGDIVAGRIISNK----MQLEAQEILRK 472
>gi|358392554|gb|EHK41958.1| hypothetical protein TRIATDRAFT_229290 [Trichoderma atroviride IMI
206040]
Length = 468
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/408 (37%), Positives = 234/408 (57%), Gaps = 41/408 (10%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V+ +A+S+GI + S +A ALA DVEYRI +++ EA++ MR +RRTT+T +D+ AL+
Sbjct: 13 ENVKDVAESVGIGSMSDEALKALAQDVEYRIGQVIIEALRLMRAARRTTMTVNDISLALR 72
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ + EP+YG+ S PLR+ A +G + LFY++D++V+F+ +I APLPR P D + HW
Sbjct: 73 VLDAEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPRVPRDMNFTAHW 132
Query: 125 LAIEGVQPVIPENAPVQAIAAPSN------GTN--------NEQKDGLPVEIKLPVKHIL 170
LAIEGVQP IP+N P A P + G N N+ G P VKHI+
Sbjct: 133 LAIEGVQPSIPQN-PTSAELRPQDLLPKGPGANPALSALAGNDTSAGQP-----SVKHIV 186
Query: 171 SRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPYFTYFVADEVSRGL 226
S+EL LYFDKI + + + + +Q AL S+ D GLH LVPYF F+ D V+ L
Sbjct: 187 SKELILYFDKIQAAILDDNPDEEVIRLRQAALGSVRDDPGLHQLVPYFINFIMDRVTHQL 246
Query: 227 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN----HWELR 282
++ L +M + L++N + ++PY L V+TCL+A++LG + ++LR
Sbjct: 247 DDTFTLKQMMELTNALIENKSLFLDPYASSLSAPVLTCLMARKLGTDEGQDSLKEQYDLR 306
Query: 283 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG-LAALGPNVVR 341
A L+ I ++Y + L+ +LT+T L LDP + YGA+ G L A G +R
Sbjct: 307 QLAASLLGRIARKYSASNSLLRPKLTRTCLKYFLDPTKPPAVLYGAIHGLLEAGGTEAIR 366
Query: 342 LLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCI 388
+L+L NL + S +L+P L EK + ++ Y L+Q Q +
Sbjct: 367 VLVLRNLKSFDSGILQP--LKEKSEGSIE-------YEMLVQGLVQAV 405
>gi|403216405|emb|CCK70902.1| hypothetical protein KNAG_0F02370 [Kazachstania naganishii CBS
8797]
Length = 555
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 228/440 (51%), Gaps = 101/440 (22%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A+S+G+ N + D ALA DVEYRI EI+++A+K RHS+ LTTDD+ +A
Sbjct: 12 PQDTVKDVAESLGLDNINEDVLKALAMDVEYRILEIIEQAVKFKRHSKTEILTTDDIAKA 71
Query: 65 LKLRNVEPVYG---------------------FASGGPLRFRR--AIGYRDLFYLDDKDV 101
L++ NVEP+YG F G P FR+ G + ++YLD+++V
Sbjct: 72 LRVLNVEPLYGYHDSVTAKNGTHNTAHGTAQSFQEGQP-SFRKVNTSGGQQVYYLDEEEV 130
Query: 102 EFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN----------------APVQAI-- 143
+F ++ PLP P + HWLAIEGVQP I +N A V A+
Sbjct: 131 DFDKLVNKPLPPLPRLPTFTTHWLAIEGVQPAILQNPNLNDIRTSLPPTTRGAIVTALNE 190
Query: 144 ----------AAPSNGTN-----------------NEQKDGLPVEIKLPVKHILSRELQL 176
+A +NG + K G +E+K VKH+LS+ELQ+
Sbjct: 191 SNSLQTQPNASATTNGNGAAGTLQQQQREQHQLLASSVKPGQNIEVKPLVKHVLSKELQI 250
Query: 177 YFDKI------TELAVSRSDSVLFK-QALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 229
YF+KI + A D+ K AL SL TD+GLH LVPYF F+A++++ L+N
Sbjct: 251 YFNKIISALTVKDEATDDGDAQHMKLAALTSLKTDNGLHQLVPYFIQFIAEQITHNLSNL 310
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG------------------ 271
LL ++ ++++LL NP I +EPY+H LMPS++T L+AK LG
Sbjct: 311 ELLTTILEMIYSLLSNPSIFLEPYIHSLMPSILTLLLAKNLGGSSNGKGSPPATAGSTTA 370
Query: 272 -------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQ 324
N D LRDF A L+ + K++ VY +L+ R+T+TLL LD R
Sbjct: 371 PPSIEEYNEQLDKANALRDFAASLLDYVLKKFPQVYKSLKPRVTRTLLKTFLDTNRVFGT 430
Query: 325 HYGAVQGLAALGPNVVRLLL 344
+YG+++G+ L +R L
Sbjct: 431 YYGSLKGVTVLESESIRFFL 450
>gi|396492072|ref|XP_003843707.1| hypothetical protein LEMA_P013580.1 [Leptosphaeria maculans JN3]
gi|312220287|emb|CBY00228.1| hypothetical protein LEMA_P013580.1 [Leptosphaeria maculans JN3]
Length = 649
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 230/409 (56%), Gaps = 39/409 (9%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V +A+S+GI++ + + LA DV++R+ ++++EA+K MRH +RTTL T D+ ALK
Sbjct: 8 DNVRDVAESVGIASLAENVVEELARDVDFRLAQVLEEALKFMRHGKRTTLNTLDISNALK 67
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ NVEP+YG+ S PLRF A +G + L+Y++D++V+F+ +I APLP+ P + + HW
Sbjct: 68 VLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPREITFTAHW 127
Query: 125 LAIEGVQPVIPENAPVQAIAAPSNGTNNE----QKDGLP-VEIKLPVKHILSRELQLYFD 179
LA+EGVQP IP+N + G N +GL V +K VKH+LS+E Q F+
Sbjct: 128 LAVEGVQPSIPQNPTTNSADLLPKGPNANPHLAAANGLDNVNVKPLVKHVLSKESQELFN 187
Query: 180 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 239
K++ ++ AL +++T+ G+H L Y F+A++V+ L + +L +MR
Sbjct: 188 KLSGALTDETNIEWQNAALAAISTEPGIHQLTTYLLSFIAEKVTHNLKDLFVLHQMMRAT 247
Query: 240 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR------------------------LA 275
LL N I ++PY+ ++P V+TC LG R L
Sbjct: 248 EALLNNQAIYLDPYVAYMVPPVLTCCTGNNLGPRPRQQPTSAFTENVNGAAANGHVTGLK 307
Query: 276 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA-A 334
D+H ELRD A ++ IC++Y L+ R+ +T L +DPK++ HYGA+ L
Sbjct: 308 DHH-ELRDKAASILKHICRKYSSSNQGLKARIARTCLKQFMDPKKSFGAHYGALHALVLI 366
Query: 335 LGPN-VVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQ 382
LG + +++L+LPN+ Y LL+ + +++ +R EA R+ G +
Sbjct: 367 LGIDEAMKMLILPNVQIYNDLLKAGL-----EDDGRRSEAERMVGLFMN 410
>gi|340519130|gb|EGR49369.1| predicted protein [Trichoderma reesei QM6a]
Length = 468
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 233/408 (57%), Gaps = 41/408 (10%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V+ +A+S+GI + S +A AL DVEYRI +++ EA++ MR +RRTT+T +DV ALK
Sbjct: 13 ENVKDVAESVGIGSMSDEALKALTQDVEYRIGQVIIEALRLMRAARRTTMTVNDVSLALK 72
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ + EP+YG+ S PLR+ A +G + LFY++D++V+F+ +I APLP+ P D + HW
Sbjct: 73 VLDAEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMNFTAHW 132
Query: 125 LAIEGVQPVIPENAPVQAIAAPSN------GTN--------NEQKDGLPVEIKLPVKHIL 170
LAIEGVQP IP+N P A P + G N N+ G P VKHI+
Sbjct: 133 LAIEGVQPSIPQN-PTSAELRPQDLLPKGPGANPALSALAGNDTGAGQPA-----VKHIV 186
Query: 171 SRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPYFTYFVADEVSRGL 226
S+EL LYFDKI + + + V +Q AL S+ D GLH LVPYF F+ D V+ L
Sbjct: 187 SKELILYFDKIQAAILDDNPDEEVVRLRQAALGSVRDDPGLHQLVPYFINFIMDRVTHQL 246
Query: 227 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN----HWELR 282
++ L +M + L++N + ++PY L V+TCL+A++LG + ++LR
Sbjct: 247 DDTFTLKQMMELTNALIENKSLFLDPYASSLSAPVLTCLMARKLGTDEGQDALKEQYDLR 306
Query: 283 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG-LAALGPNVVR 341
A L+ I ++Y + L+ +LT+T L LDP + YGA+ G L A G +R
Sbjct: 307 QLAASLLGRIARKYSASNSLLRPKLTRTCLKYFLDPTKPPAVLYGAIHGLLEAGGMEAIR 366
Query: 342 LLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCI 388
+L+L NL + S +L+P L EK + ++ Y L+Q Q +
Sbjct: 367 VLVLRNLKSFDSGILQP--LKEKSQGSIE-------YEMLVQGIVQAV 405
>gi|349578116|dbj|GAA23282.1| K7_Taf6p, partial [Saccharomyces cerevisiae Kyokai no. 7]
Length = 478
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 212/370 (57%), Gaps = 57/370 (15%)
Query: 32 DVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRR- 86
DVEYRI EI+++A+K RHS+R LTTDDV +AL++ NVEP+YG+ G + F +
Sbjct: 2 DVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKV 61
Query: 87 -AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-------- 137
G + ++YLD+++V+F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 62 NTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRV 121
Query: 138 --------------------APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHIL 170
PV + A ++ T+ + K G E+K VKH+L
Sbjct: 122 SQPPFIRGAIVTALNDNSLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHVL 181
Query: 171 SRELQLYFDKI--TELAVSRSDSV---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 225
S+ELQ+YF+K+ T A S++D + + AL SL TDSGLH LVPYF F+A+++++
Sbjct: 182 SKELQIYFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQN 241
Query: 226 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE----- 280
L++ LL ++ ++++LL N I ++PY+H LMPS++T L+AK+LG D+ +
Sbjct: 242 LSDLQLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEF 301
Query: 281 ------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
LRDF A L+ + K++ Y +L+ R+T+TLL LD R +YG ++G++
Sbjct: 302 LERTNALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSV 361
Query: 335 LGPNVVRLLL 344
L +R L
Sbjct: 362 LEGESIRFFL 371
>gi|340959744|gb|EGS20925.1| transcription initiation factor TFIID-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 480
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 237/419 (56%), Gaps = 39/419 (9%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V +A ++GI+ S + LA DVEYRI +++ E+++ MR + RTTLT DV AL+
Sbjct: 14 ENVRDVADALGIT-LSEEPLRLLAQDVEYRIGQVIVESLRFMRAANRTTLTVQDVSLALR 72
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLR+ A +G + LFY+DD++V+F+ VI APLP+ P D + HW
Sbjct: 73 VLDVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEVDFEKVINAPLPKVPRDMTFTAHW 132
Query: 125 LAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLP----VEIKLPVKHILSRELQL 176
LA+EGVQP IP+N ++ P N L V + VKH++S+EL L
Sbjct: 133 LAVEGVQPSIPQNPTTAETSSKDLLPKGPGANPALAALAGNDNVSFRPSVKHVISKELIL 192
Query: 177 YFDKITELAVSRSD-----SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 231
YFDKI + A+ D L + AL S+ +D GLH L+PYF F+ ++V+ L++ +
Sbjct: 193 YFDKI-QAAILDDDPDEEKMRLRQAALESVRSDPGLHQLLPYFVNFITNQVTHHLDDLFI 251
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN-------------- 277
L +M + ++QNP + I+PY L V+TCL++++LG + N
Sbjct: 252 LRQMMELAEAVVQNPTLFIDPYASALAAPVLTCLMSRKLGKNPSSNDEGALGAGNSIDST 311
Query: 278 ---HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
+ LR+ A L++ I ++YG L+ +LT+T L LDP R +GA+ G+AA
Sbjct: 312 LREQYSLRELAASLLSMIARKYGASNALLRPKLTRTCLKHFLDPTRPPAVLFGAISGVAA 371
Query: 335 L-GPNVVRLLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDR 391
GP VR+L+LPNL + S +L+P L ++ V E + G +++A + D+
Sbjct: 372 SGGPEAVRVLVLPNLKTFDSAVLQP---LREKAGPVAELEYEMLVGGIVKAVQSIVGDQ 427
>gi|367037809|ref|XP_003649285.1| TAF6-like protein [Thielavia terrestris NRRL 8126]
gi|346996546|gb|AEO62949.1| TAF6-like protein [Thielavia terrestris NRRL 8126]
Length = 468
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 221/375 (58%), Gaps = 26/375 (6%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V +A S GI+ S + LA DVEYRI +++ EA++ MR + RTTLT DV AL+
Sbjct: 14 DNVRDVADSQGIT-LSEEPLRVLAQDVEYRIGQLIVEALRFMRAANRTTLTVQDVSLALR 72
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ VEP+YG+ S PLR+ A +G + LFY+DD++++F+ VI APLP+ P D S HW
Sbjct: 73 VLKVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEIDFEKVINAPLPKVPRDMSFTAHW 132
Query: 125 LAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLP----VEIKLPVKHILSRELQL 176
LA+EGVQP IP+N ++ P N L V + VKH++S+EL L
Sbjct: 133 LAVEGVQPSIPQNPTTAETSSKDLLPKGPGANPALAALAGNDNVSFRPSVKHVISKELIL 192
Query: 177 YFDKITELAVSRSD-----SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 231
YFDKI + A+ D + L + AL S+ +D GLH L+PYF F+ ++V+ L++ +
Sbjct: 193 YFDKI-QAAILDDDPDEEKTRLREAALESVRSDPGLHQLLPYFVNFITNQVTHHLDDLFV 251
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD-------NHWELRDF 284
L +M + ++QNP + ++PY L V+TCL+A++LG D + LR+
Sbjct: 252 LRQMMELAEAVIQNPSLFLDPYASALSAPVLTCLMARKLGGAAPDEGGDALREQYRLREL 311
Query: 285 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLL 343
A L+ I ++YG L+ +LT+T L LDP R +GA++G+AA GP VR+L
Sbjct: 312 AASLLEMIARKYGASNALLRPKLTRTCLKHFLDPTRPPAVLFGAIRGVAASGGPEAVRIL 371
Query: 344 LLPNLGPY-LSLLEP 357
+LPNL + ++L+P
Sbjct: 372 VLPNLKSFDAAVLQP 386
>gi|380476480|emb|CCF44690.1| TATA box binding protein associated factor [Colletotrichum
higginsianum]
Length = 461
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 227/403 (56%), Gaps = 24/403 (5%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V+ +A+S+GI N DA L DVEYRI +++ EA++ MR SRRTTLT +D+ ALK
Sbjct: 14 DNVKDVAESVGIPNLHDDALRCLTQDVEYRIGQVLVEALRFMRASRRTTLTVNDISTALK 73
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
N+EP+YG+ S PLR+ A +G + LFY++D++V+F+ +I APLP+ P D S HW
Sbjct: 74 ALNIEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMSFTAHW 133
Query: 125 LAIEGVQPVIPENAPV-----QAIAAPSNGTN---NEQKDGLPVEIKLPVKHILSRELQL 176
LAIEGVQP IP+N Q + G N + + VKH++S+EL L
Sbjct: 134 LAIEGVQPSIPQNPTTAESRSQELVPKGPGANPALAALAGNDSISFRPAVKHVVSKELIL 193
Query: 177 YFDKITELAVSRSDS----VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLL 232
YF+K+ + + L AL S+ D GLH L+PYF FVA++V+ L++ L
Sbjct: 194 YFEKVQNAILDDNPDEEVVRLRHAALESVRDDPGLHQLIPYFINFVANQVTHRLDDVFTL 253
Query: 233 FALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN----HWELRDFTAKL 288
M + L+ N + ++PY + + V+TC++ +++G + ++LR+F+A L
Sbjct: 254 RQAMELTAALIANTKLYLDPYANAIAAPVLTCILGRKIGAEDGADAMREQYQLREFSASL 313
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA-ALGPNVVRLLLLPN 347
+ I ++Y N L+ +L +T L +DP + H+GA+ G+A A GP VR+L+L
Sbjct: 314 LGQIARKYAASNNLLRPKLVRTCLKFFMDPDKPPATHFGAITGVASAGGPEAVRVLVLKC 373
Query: 348 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYD 390
L Y + +L+ ++ + E + G +L+A I D
Sbjct: 374 LRAY-----NDNILQPLRDRGEGVEFEMLVGGILKAIATMIED 411
>gi|46132948|ref|XP_389187.1| hypothetical protein FG09011.1 [Gibberella zeae PH-1]
Length = 463
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/437 (36%), Positives = 240/437 (54%), Gaps = 39/437 (8%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V+ +A+S+GIS+ + +A L DVEYR+ +++ EA++ MR SRRTTLT +D+ AL+
Sbjct: 13 DNVKDVAESVGISSLNEEALKCLTQDVEYRVGQVIVEALRFMRASRRTTLTVNDISLALR 72
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+VEP+YG+ S PLR+ A +G + LFY++D++V+F+ +I APLP+ P D HW
Sbjct: 73 ALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMGFTAHW 132
Query: 125 LAIEGVQPVIPENAPV-----QAIAAPSNGTN---NEQKDGLPVEIKLPVKHILSRELQL 176
LAIEGVQP IP+N Q + G N + V +K VKHI+S+EL L
Sbjct: 133 LAIEGVQPSIPQNPTTSESRSQELLPKGPGANPALSALAGNDNVSMKPSVKHIVSKELIL 192
Query: 177 YFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLL 232
YFDKI + + + V +Q AL S+ D GLH L+PYF F+ D V+ L++ L
Sbjct: 193 YFDKIQAAVLDDNPDEEVVRLRQAALGSVRDDPGLHQLIPYFITFIMDRVTHHLDDTFTL 252
Query: 233 FALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN----HWELRDFTAKL 288
+M + L++N + ++PY L +TCL+A++LG + +ELR A L
Sbjct: 253 KQMMELTNALIENKSLFLDPYASPLSAPALTCLMARKLGTEDGTDALKEQYELRQLAASL 312
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG-LAALGPNVVRLLLLPN 347
V I ++Y L+ +LT+T L LDP + YGA+ G L A GP +R+L+L N
Sbjct: 313 VGQIARKYSASNTLLRPKLTRTCLKYFLDPTKPPAVLYGAIHGLLEAGGPEAIRVLVLRN 372
Query: 348 LGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSV 406
L + S +L+P L EK + + Y L+Q Q + +SL
Sbjct: 373 LKTFDSGILQP--LREKMEGSMD-------YEMLVQGIVQAV----------ASLADHIS 413
Query: 407 WKTNGIVATLSNKRKTS 423
TNGI + S + + S
Sbjct: 414 SDTNGINGSTSVEGEAS 430
>gi|322703194|gb|EFY94807.1| transcription initiation factor TFIID complex 60 kDa subunit
[Metarhizium anisopliae ARSEF 23]
Length = 465
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/379 (38%), Positives = 221/379 (58%), Gaps = 36/379 (9%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V+ +A+S+GIS+ + +A AL DVEYRI +++ EA++ MR +RRTTLT +DV ALK
Sbjct: 15 DNVKDVAESVGISSLNDEALKALTQDVEYRIGQVIIEALRLMRAARRTTLTVNDVSLALK 74
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLR+ A +G + LFY++D++V+F+ +I APLP+ P D + HW
Sbjct: 75 VLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMNFTAHW 134
Query: 125 LAIEGVQPVIPENAPVQ----------------AIAAPSNGTNNEQKDGLPVEIKLPVKH 168
LAIEGVQP IP+N A+AA + N V +K VKH
Sbjct: 135 LAIEGVQPSIPQNPTTAESRSQELLPKGPGANPALAALAGNDN--------VAVKPSVKH 186
Query: 169 ILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPYFTYFVADEVSR 224
I+S+EL LYFDKI + + + V +Q AL S+ D GLH LVPYF F+ D V+
Sbjct: 187 IVSKELILYFDKIQAAILDDNPDEEVVRLRQAALGSVRDDPGLHQLVPYFINFIMDRVTH 246
Query: 225 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN----RLADNHWE 280
L++ L +M + L++N + ++PY L +TCL+A++LG + ++
Sbjct: 247 HLDDTFTLRHMMELTNALIENKSLFLDPYASSLSAPALTCLMARKLGTDDGVDAMKDQYD 306
Query: 281 LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG-LAALGPNV 339
LR A LV I ++Y L+ +LT+T L LDP + YGA+ G L A GP
Sbjct: 307 LRQLAASLVGRIARKYSASNTLLRPKLTRTCLKYFLDPTKPPAVLYGAIYGLLEAGGPEA 366
Query: 340 VRLLLLPNLGPY-LSLLEP 357
+R+L+L N+ + ++L+P
Sbjct: 367 IRVLVLRNMKTFDAAILQP 385
>gi|302896134|ref|XP_003046947.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727875|gb|EEU41234.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 462
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 158/432 (36%), Positives = 238/432 (55%), Gaps = 45/432 (10%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V+ +A+S+GIS+ + +A L DVEYRI +++ E+++ MR +RRTTLT +D+ AL+
Sbjct: 12 ENVKDVAESVGISSLNDEALKCLTQDVEYRIGQVIVESLRFMRAARRTTLTVNDISLALR 71
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+VEP+YG+ S PLR+ A +G + LFY++D++V+F+ +I APLP+ P D HW
Sbjct: 72 ALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMGFTAHW 131
Query: 125 LAIEGVQPVIPENAPV-----QAIAAPSNGTN---NEQKDGLPVEIKLPVKHILSRELQL 176
LAIEGVQP IP+N Q + G N + V +K VKHI+S+EL L
Sbjct: 132 LAIEGVQPSIPQNPTTSESRSQELLPKGPGANPALSALAGNDNVAMKPSVKHIVSKELIL 191
Query: 177 YFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLL 232
YFDKI + + + V +Q AL S+ D GLH L+PYF F+ D V+ L++ L
Sbjct: 192 YFDKIQAAILDDNPDEEVVRLRQAALGSVRDDPGLHQLIPYFINFIMDRVTHHLDDTFTL 251
Query: 233 FALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD-------NHWELRDFT 285
+M + L++N + ++PY L +TCL+A++LG AD ++LR
Sbjct: 252 KQMMELTNALIENKSLFLDPYASPLSAPALTCLMARKLG---ADEGVDAIKEQYDLRQLA 308
Query: 286 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG-LAALGPNVVRLLL 344
A LV I ++Y L+T+LT+T L LDP + YGA+ G L A GP +R+L+
Sbjct: 309 ASLVGQIARKYSASNTLLRTKLTRTCLKYFLDPTKPPAVLYGAIHGLLEAGGPEAIRVLV 368
Query: 345 LPNLGPY-LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPA 403
L NL + ++L+P L EK + + Y L+Q Q + +SL
Sbjct: 369 LRNLKTFDTAILQP--LKEKAEGTMD-------YEMLVQGIVQAV----------ASLSE 409
Query: 404 RSVWKTNGIVAT 415
R NG+ T
Sbjct: 410 RGESSVNGVNGT 421
>gi|169615571|ref|XP_001801201.1| hypothetical protein SNOG_10944 [Phaeosphaeria nodorum SN15]
gi|160702992|gb|EAT81443.2| hypothetical protein SNOG_10944 [Phaeosphaeria nodorum SN15]
Length = 471
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 142/419 (33%), Positives = 233/419 (55%), Gaps = 54/419 (12%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V +A+S+GI++ + + LA DV++R+ ++++EA+K MRH +RTTL+T D+ ALK
Sbjct: 8 DNVRDVAESVGIASLADNVVEELARDVDFRLAQVLEEAMKFMRHGKRTTLSTHDISHALK 67
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLD---TSIV 121
+ NVEP+YG+ S PLRF A +G + L+Y++D++V+F+ +I APLP+ P + T I
Sbjct: 68 VLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPREITFTGIP 127
Query: 122 CHWLAIEGVQPVIPENAPVQAIA-------------APSNGTNNEQKDGLPVEIKLPVKH 168
HWLA+EGVQP IP+N P A A +NG +N V +K VKH
Sbjct: 128 AHWLAVEGVQPSIPQN-PTTNTADLLPKGPNANPHLAAANGLDN-------VNVKPLVKH 179
Query: 169 ILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN 228
+LS+E Q F K++ ++ AL ++ T+ G+H L Y F+A++V+ + N
Sbjct: 180 VLSKESQELFAKLSSALTDETNIEWQNAALAAIRTEPGIHQLTTYLLSFIAEKVTHNMKN 239
Query: 229 YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG---------------NR 273
+L +M+ LL N I ++PY+ ++P ++TC + LG NR
Sbjct: 240 LFVLHQMMQATQALLDNQAIYLDPYMAYMVPPILTCCTGRHLGPTTPQASSNASSETLNR 299
Query: 274 LADN--------HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQH 325
N H+ELR + A L++ IC++ L++R+ +T L +DP ++ H
Sbjct: 300 NGANGPVSSQFDHFELRTYAASLLSRICQKGSASNQGLKSRIARTCLKQFMDPDKSPGTH 359
Query: 326 YGAVQGLAALG-PNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
YGA++ L ++ V++L+LPNL Y ++L K E R++ RV G L++A
Sbjct: 360 YGALRALMSITHQEGVQMLILPNLKAY----NDDVLKIKLAEENSRNDTERVIGMLVRA 414
>gi|408393425|gb|EKJ72689.1| hypothetical protein FPSE_07089 [Fusarium pseudograminearum CS3096]
Length = 463
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 158/437 (36%), Positives = 240/437 (54%), Gaps = 39/437 (8%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V+ +A+S+GIS+ + +A L DVEYR+ +++ EA++ MR SRRTTLT +D+ AL+
Sbjct: 13 DNVKDVAESVGISSLNEEALKCLTQDVEYRVGQVIVEALRFMRASRRTTLTVNDISLALR 72
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+VEP+YG+ S PLR+ A +G + LFY++D++V+F+ +I APLP+ P D HW
Sbjct: 73 ALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMGFTAHW 132
Query: 125 LAIEGVQPVIPENAPV-----QAIAAPSNGTN---NEQKDGLPVEIKLPVKHILSRELQL 176
LAIEGVQP IP+N Q + G N + V +K VKHI+S+EL L
Sbjct: 133 LAIEGVQPSIPQNPTTSESRSQELLPKGPGANPALSALAGNDNVSMKPSVKHIVSKELIL 192
Query: 177 YFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLL 232
YFDKI + + + V +Q AL S+ D GLH L+PYF F+ D V+ L++ L
Sbjct: 193 YFDKIQAAVLDDNPDEEVVRLRQAALGSVRDDPGLHQLIPYFITFIMDRVTHHLDDTFTL 252
Query: 233 FALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN----HWELRDFTAKL 288
+M + L++N + ++PY L +TCL+A++LG + ++LR A L
Sbjct: 253 KQMMELTNALIENKSLFLDPYASPLSAPALTCLMARKLGTEDGTDALKEQYDLRQLAASL 312
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG-LAALGPNVVRLLLLPN 347
V I ++Y L+ +LT+T L LDP + YGA+ G L A GP +R+L+L N
Sbjct: 313 VGQIARKYSASNTLLRPKLTRTCLKYFLDPTKPPAVLYGAIHGLLEAGGPEAIRVLVLRN 372
Query: 348 LGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSV 406
L + S +L+P L EK + + Y L+Q Q + +SL
Sbjct: 373 LKTFDSGILQP--LREKMEGSMD-------YEMLVQGIVQAV----------ASLADHIS 413
Query: 407 WKTNGIVATLSNKRKTS 423
TNGI + S + + S
Sbjct: 414 SDTNGINGSTSVEGEAS 430
>gi|171693115|ref|XP_001911482.1| hypothetical protein [Podospora anserina S mat+]
gi|170946506|emb|CAP73307.1| unnamed protein product [Podospora anserina S mat+]
Length = 466
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 225/398 (56%), Gaps = 26/398 (6%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V +A SIGIS + LA DVEYRI +++ E+++ MR S RTTLT DV A++
Sbjct: 15 ENVRDVADSIGIS-LGDEPLRVLAQDVEYRIGQVIIESLRFMRASNRTTLTVQDVSNAMR 73
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ VEP+YG+ S PLR+ A +G + LFY++D++V+F+ +I APLP+ P DTS HW
Sbjct: 74 VLQVEPLYGYESTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDTSFTSHW 133
Query: 125 LAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLP----VEIKLPVKHILSRELQL 176
LA+EGVQP IP+N ++ P N L V + VKH++S+EL L
Sbjct: 134 LALEGVQPSIPQNPTTAETSSKDLLPKGPGANPALAALAGNDNVSFRPAVKHVISKELIL 193
Query: 177 YFDKITELAV----SRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLL 232
YFDKI + + L AL S+ +D GLH L+PYF F+A++V+ L++ +L
Sbjct: 194 YFDKIQSAILDDDPDEEKTRLRMAALESVRSDPGLHQLLPYFVNFIANQVTLRLDDLFVL 253
Query: 233 FALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN-----RLADNHWELRDFTAK 287
+M + ++QNP+ ++PY L ++TCL++ +LG + + LR+ A
Sbjct: 254 RQMMELTEAIIQNPNFFLDPYASSLAAPILTCLMSNKLGGIEDGTDTVKDQYSLRELAAS 313
Query: 288 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLP 346
L+ + +Y L+ +LT+T L ++P R +GA+ G+AA GP VR+L+LP
Sbjct: 314 LLGVLATKYNKSNRQLRPKLTRTCLKYFMEPNRPPAVLFGAISGVAAAGGPEAVRILMLP 373
Query: 347 NLGPY-LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
N+ + ++L+P K E + E + G +++A
Sbjct: 374 NVKSFDQAVLQP----LHDKGEAHKLEYEMLVGGIMKA 407
>gi|346318510|gb|EGX88113.1| transcription initiation factor [Cordyceps militaris CM01]
Length = 470
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 234/422 (55%), Gaps = 46/422 (10%)
Query: 2 SIVPK-----ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTL 56
S VPK E ++ +A+S+GI + +A ALA DVEYR+ +++ E+++ MR +RRTTL
Sbjct: 3 SEVPKLLWNSENIKDVAESVGIGALNEEATKALAQDVEYRVGQVIIESLRLMRAARRTTL 62
Query: 57 TTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRA 114
T +DV AL++ + EP+YG+ S PLRF A +G + LFY+DD++VEF+ +I APLP+
Sbjct: 63 TVNDVSLALRVLDAEPLYGYDSTRPLRFGEASMGPGQPLFYIDDEEVEFEKLINAPLPKV 122
Query: 115 PLDTSI--------VCHWLAIEGVQPVIPEN-----APVQAIAAPSNGTNN-----EQKD 156
P D + HWLAIEGVQP IP+N + +Q + G N D
Sbjct: 123 PRDMNFTARLTAEGTAHWLAIEGVQPSIPQNPTTAESRLQDLLPKGTGANPALSALAGND 182
Query: 157 GLPVEIKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVP 212
P VKHI+S+EL LYFDKI + + + V +Q AL S+ D GLH L P
Sbjct: 183 NAPTNPS--VKHIVSKELILYFDKIQAAILDENPDQEVVRLRQAALGSVRDDPGLHQLAP 240
Query: 213 YFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 272
YF F+ D V+ L++ L +M + L++N + ++PY L V+TCL+A++LG
Sbjct: 241 YFINFIMDRVTHQLDDTFTLKQMMELTNALIENKTLFLDPYASSLSAPVLTCLMARKLGT 300
Query: 273 ----RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGA 328
+ +ELR A L+ + +Y + L+ +LT+T L LDP + YGA
Sbjct: 301 DDGVDAMKDQYELRQLAASLIGRMAHKYAASNSLLRPKLTRTCLRYFLDPTKPPAVLYGA 360
Query: 329 VQG-LAALGPNVVRLLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQ 386
V G L A GP VRLL+L NL + S +L+P L EK + ++ Y L+Q Q
Sbjct: 361 VNGILQAGGPEAVRLLVLRNLKSFDSGILQP--LKEKSEGSIE-------YEMLVQGLVQ 411
Query: 387 CI 388
+
Sbjct: 412 AV 413
>gi|342872127|gb|EGU74524.1| hypothetical protein FOXB_14969 [Fusarium oxysporum Fo5176]
Length = 463
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 217/371 (58%), Gaps = 20/371 (5%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V+ +A+S+GIS+ + +A L DVEYR+ +++ E+++ MR +RRTTLT +D+ ALK
Sbjct: 13 DNVKDVAESVGISSLNEEALKCLTQDVEYRVGQVIVESLRFMRAARRTTLTVNDISLALK 72
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+VEP+YG+ S PLR+ A +G + LFY++D++V+F+ +I APLP+ P D HW
Sbjct: 73 ALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMGFTAHW 132
Query: 125 LAIEGVQPVIPENAPV-----QAIAAPSNGTN---NEQKDGLPVEIKLPVKHILSRELQL 176
LAIEGVQP IP+N Q + G N + V +K VKHI+S+EL L
Sbjct: 133 LAIEGVQPSIPQNPTTSESRSQELLPKGPGANPALSALAGNDNVSMKPSVKHIVSKELIL 192
Query: 177 YFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLL 232
YFDKI + + + V +Q AL S+ D GLH L+PYF F+ D V+ L++ L
Sbjct: 193 YFDKIQAAVLDDNPDEEVVRLRQAALGSVRDDPGLHQLIPYFITFIMDRVTHHLDDTFTL 252
Query: 233 FALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN----HWELRDFTAKL 288
+M + L++N + ++PY L +TCL+A++LG + ++LR A L
Sbjct: 253 KQMMELTNALIENKSLFLDPYASPLSAPALTCLMARKLGTDEGTDALKEQYDLRQLAASL 312
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG-LAALGPNVVRLLLLPN 347
V I ++Y L+ +LT+T L LDP + YGA+ G L A GP +R+L+L N
Sbjct: 313 VGRIARKYSASNTLLRPKLTRTCLKYFLDPTKPPAVLYGAIHGLLEAGGPEAIRVLVLRN 372
Query: 348 LGPYLS-LLEP 357
L + S +L+P
Sbjct: 373 LQTFDSGILQP 383
>gi|357605897|gb|EHJ64821.1| transcription initiation factor TFIID subunit 6 [Danaus plexippus]
Length = 579
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/347 (38%), Positives = 191/347 (55%), Gaps = 47/347 (13%)
Query: 48 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 106
M HS+R L+ D+D ALK++N E YGF L FR A G R+L ++++K+++ ++
Sbjct: 1 MHHSKRQKLSITDIDNALKIKNTEAQYGFVQPDSLPFRFASGGGRELHFIEEKEIDLSEI 60
Query: 107 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENA--------------PVQAIAAPSN---- 148
+ AP P+ PLD S+ HWL+++GVQP +PEN PV ++ P+N
Sbjct: 61 LSAPPPKIPLDVSLRAHWLSVDGVQPTVPENPPPLSKEAQKLESVDPVSKLSKPANKDSA 120
Query: 149 -----GTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 203
G K V +K H LS E QLY+ +ITE V SD +AL SLA
Sbjct: 121 GKPVSGKAARLKASESVHVKQLATHELSVEQQLYYKEITEAGVG-SDEGRRAEALQSLAC 179
Query: 204 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 261
D GLH ++P F+++ V + NN +LL LMR+V +L N + +E YLH+L+PSV
Sbjct: 180 DPGLHEMLPRMCTFISEGVKVNVVQNNLALLIYLMRMVKAMLDNQSLYLEKYLHELIPSV 239
Query: 262 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP-- 318
TC+V+++L R DNHW LRDF A+L+A +CK + N LQTR+T+ AL P
Sbjct: 240 STCIVSRQLCTRPEVDNHWALRDFAARLMAQLCKTFNTSTNNLQTRVTRLFAKALQCPSQ 299
Query: 319 -----------------KRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
K L YGAVQGLA LGP VV++ +LP +
Sbjct: 300 TNNESGPSMVASMKESEKTPLASLYGAVQGLAELGPEVVKVFILPRV 346
>gi|441649872|ref|XP_004093341.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 6, partial [Nomascus leucogenys]
Length = 607
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 193/326 (59%), Gaps = 40/326 (12%)
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 1 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 60
Query: 121 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 150
HWL+IEG QP IPEN P +A A ++G
Sbjct: 61 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGTLKGKGQGATTADGK 120
Query: 151 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 205
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 121 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 179
Query: 206 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 180 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 239
Query: 264 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 240 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 299
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
T YG++ GLA LG +V++ L+LP L
Sbjct: 300 TTRYGSIAGLAELGHDVIKTLILPRL 325
>gi|389629410|ref|XP_003712358.1| transcription initiation factor TFIID subunit 6 [Magnaporthe oryzae
70-15]
gi|351644690|gb|EHA52551.1| transcription initiation factor TFIID subunit 6 [Magnaporthe oryzae
70-15]
Length = 512
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 216/388 (55%), Gaps = 37/388 (9%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V+ +A+S+GI N + DA LA DVEYRI +++ EA++ MR + RTTLT D +A K
Sbjct: 37 ENVKDVAESVGIPNINDDAVRCLAQDVEYRIGQVLVEALRFMRAANRTTLTVQDTSQAFK 96
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLR+ A +G + LFY+DD++V+F+ +I APLP+ P D S HW
Sbjct: 97 VLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIDDEEVDFEKLINAPLPKVPRDMSFTAHW 156
Query: 125 LAIEGVQPVIPEN-----APVQAIAAPSNGTN---NEQKDGLPVEIKLPVKHILSRELQL 176
LA+EGVQP IP+N + Q + G N N + VK I+S+EL L
Sbjct: 157 LAVEGVQPSIPQNPTTAESRAQELIPKGPGANPALNALAGNDNLAFHPAVKQIISKELVL 216
Query: 177 YFDKITELAVSRSDSV----LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLL 232
YFDKI + + L AL S+ D GLH LVPYF F+A++V+ L++ +
Sbjct: 217 YFDKIQAAVLDDTPDEEVVRLRNAALASVRNDPGLHQLVPYFANFIANQVTHRLDDTFTV 276
Query: 233 FALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE------------ 280
+M + L+ N ++ ++PY L V+T L+++++G + + E
Sbjct: 277 RQMMELTAALVDNSNLFLDPYAGPLSAPVLTALMSRKIGASTSTSKQEEGSGSGNSSSVN 336
Query: 281 ---------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG 331
LR+F A L+ I +Y L+++LT+T L LLDP + +GA+ G
Sbjct: 337 REALREQFLLREFAASLLGKIAIKYTRANRHLRSKLTRTCLKYLLDPTKPAPVLFGALNG 396
Query: 332 LAAL-GPNVVRLLLLPNLGPY-LSLLEP 357
LAA GP R+L+LPNL + +L+P
Sbjct: 397 LAAAGGPEAFRILVLPNLREFDTGMLQP 424
>gi|440465447|gb|ELQ34767.1| transcription initiation factor TFIID subunit 6 [Magnaporthe oryzae
Y34]
gi|440487666|gb|ELQ67441.1| transcription initiation factor TFIID subunit 6 [Magnaporthe oryzae
P131]
Length = 511
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 216/388 (55%), Gaps = 37/388 (9%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V+ +A+S+GI N + DA LA DVEYRI +++ EA++ MR + RTTLT D +A K
Sbjct: 36 ENVKDVAESVGIPNINDDAVRCLAQDVEYRIGQVLVEALRFMRAANRTTLTVQDTSQAFK 95
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLR+ A +G + LFY+DD++V+F+ +I APLP+ P D S HW
Sbjct: 96 VLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIDDEEVDFEKLINAPLPKVPRDMSFTAHW 155
Query: 125 LAIEGVQPVIPEN-----APVQAIAAPSNGTN---NEQKDGLPVEIKLPVKHILSRELQL 176
LA+EGVQP IP+N + Q + G N N + VK I+S+EL L
Sbjct: 156 LAVEGVQPSIPQNPTTAESRAQELIPKGPGANPALNALAGNDNLAFHPAVKQIISKELVL 215
Query: 177 YFDKITELAVSRSDSV----LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLL 232
YFDKI + + L AL S+ D GLH LVPYF F+A++V+ L++ +
Sbjct: 216 YFDKIQAAVLDDTPDEEVVRLRNAALASVRNDPGLHQLVPYFANFIANQVTHRLDDTFTV 275
Query: 233 FALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE------------ 280
+M + L+ N ++ ++PY L V+T L+++++G + + E
Sbjct: 276 RQMMELTAALVDNSNLFLDPYAGPLSAPVLTALMSRKIGASTSTSKQEEGSGSGNSSSVN 335
Query: 281 ---------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG 331
LR+F A L+ I +Y L+++LT+T L LLDP + +GA+ G
Sbjct: 336 REALREQFLLREFAASLLGKIAIKYTRANRHLRSKLTRTCLKYLLDPTKPAPVLFGALNG 395
Query: 332 LAAL-GPNVVRLLLLPNLGPY-LSLLEP 357
LAA GP R+L+LPNL + +L+P
Sbjct: 396 LAAAGGPEAFRILVLPNLREFDTGMLQP 423
>gi|320589938|gb|EFX02394.1| transcription initiation factor tfiid complex subunit [Grosmannia
clavigera kw1407]
Length = 535
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 152/409 (37%), Positives = 219/409 (53%), Gaps = 68/409 (16%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V +A+S+G+S + DA L+ DVEYRI +++ EA++ MR RTTLT D+ AL+
Sbjct: 18 ENVRDVAESVGVSQLADDALRCLSQDVEYRIGQVIVEALRFMRAGGRTTLTVQDMSLALR 77
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLR+ A +G + LFY++D++VEF+ ++ APLPR P D S+ HW
Sbjct: 78 VLDVEPLYGYESTRPLRYGEASLGPGQPLFYVEDEEVEFERLVNAPLPRVPRDASLTAHW 137
Query: 125 LAIEGVQPVIPENAPVQAIA-----APSNGTNNEQKDGLP----VEIKLPVKHILSRELQ 175
LAIEGVQP IP+N P A A P N L V K +KHI+S EL
Sbjct: 138 LAIEGVQPAIPQN-PTTAEARSQELVPKGPGANPALAALAGNDNVGFKPAIKHIISNELV 196
Query: 176 LYFDKITELAVSRS-DSVLFK---QALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 231
LYFDKI + + D + + AL S+ +D GLH LVPYF F+A++++ +++
Sbjct: 197 LYFDKIQAAVLDDNPDEEVLRLRDAALDSVRSDPGLHQLVPYFVNFIANQITHRMDDVFA 256
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKR--------------------LG 271
L M + L+ NPH+ ++PY L V+TCLVA+R LG
Sbjct: 257 LRRTMELTSALVANPHLFLDPYASPLCAPVLTCLVARRLGGLGAGSGAGGSGPGGVGDLG 316
Query: 272 -----------------NRLADNH--------------WELRDFTAKLVAAICKRYGHVY 300
N + +H + LR+ A L+ + +++ H
Sbjct: 317 SDSGHNDSHSINGIHATNGINGSHTVHGLLPDSIVRETYLLRELAASLLGQLARKFAHSN 376
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
L+ +LT+T L LL+P R YGAV GLAA GP VR+L+LPNL
Sbjct: 377 ALLRPKLTRTCLKVLLEPSRPAPVLYGAVCGLAAAGGPEAVRVLVLPNL 425
>gi|167391320|ref|XP_001739722.1| transcription initiation factor tfiid [Entamoeba dispar SAW760]
gi|165896481|gb|EDR23886.1| transcription initiation factor tfiid, putative [Entamoeba dispar
SAW760]
Length = 433
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/344 (34%), Positives = 192/344 (55%), Gaps = 10/344 (2%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P + ++ + + G S + ++ + E I E+ EA K MRHS+R LT D++
Sbjct: 6 IPLDFIKSMLTANGFEEMSDEMINLISEEAENSISELFNEATKFMRHSKRKMLTIQDINS 65
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPL-PRAPLDTSIVC 122
ALKL+ +EP YG+ S PL ++R ++F ++ + ++I P P D ++ C
Sbjct: 66 ALKLKKLEPYYGYNSSIPLYYQRLPSNHEMFVRQEQSIGLNEIIHCQFFPDIPRDINVGC 125
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
HWL +EGVQP+IP+N PS +QK +E K ++H LS+ELQ+Y+D +
Sbjct: 126 HWLTVEGVQPLIPQN--------PSVVVQEKQKQEETIETKPIIQHSLSKELQMYYDMVV 177
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
E+ ++ ++ + L S+ TDSGL L PYF ++++ L + +L ++ +V +
Sbjct: 178 EI-LNTNNKEKIDECLDSVRTDSGLQQLTPYFIRYISNHTLANLGSLEILANMLSLVNAM 236
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNT 302
+N +I +EPYLHQL P ++T +V K++G DNHW +R A +V + RY Y
Sbjct: 237 RENQNINLEPYLHQLFPIILTLVVTKQIGTNSYDNHWNIRVQAAAIVKKLRDRYSEKYGR 296
Query: 303 LQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 346
L RL +T L A+ D + LT YG + G+ A+GP V LL+P
Sbjct: 297 LHARLLQTYLQAITDATKPLTTQYGGIVGITAMGPRAVYHLLVP 340
>gi|402080997|gb|EJT76142.1| transcription initiation factor TFIID subunit 6 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 527
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 219/403 (54%), Gaps = 52/403 (12%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V+ +A+S+GI N DA L+ DVEYRI +++ EA++ MR + RTTLT D +A K
Sbjct: 29 ENVKDVAESVGIPNIGEDALRCLSQDVEYRIGQVIVEALRFMRAANRTTLTVQDTSQAFK 88
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLR+ A +G + LFY+DD++V+F+ +I APLP+ P D S HW
Sbjct: 89 VLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIDDEEVDFEKLINAPLPKVPRDMSFTAHW 148
Query: 125 LAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLPVEIKL----PVKHILSRELQL 176
LA+EGVQP IP+N A P N L L VK I+S+EL L
Sbjct: 149 LAVEGVQPSIPQNPTTAESRAQELIPKGPGANPALSALAGNDNLAFHPAVKQIISKELVL 208
Query: 177 YFDKITELAVSRS----DSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLL 232
YFDKI + S + L + AL S+ TD GLH LVPYF F+A++V+ L++ L
Sbjct: 209 YFDKIQAAVLDDSPDEETARLREAALESVRTDPGLHQLVPYFANFIANQVTHRLDDTFTL 268
Query: 233 FALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL--------------------GN 272
+M + L+ NPH+ ++PY L V+T L+++++ G+
Sbjct: 269 RMMMELTAALVDNPHLFLDPYAGPLSAPVLTALMSRKIGGGGASAPTAAAAPAPTASNGS 328
Query: 273 RL----------------ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 316
+ + + LR+F A L+ I +Y L+++LT+T L LL
Sbjct: 329 GMDVDGAVAAPAAPPADPIHDQFLLREFAASLLGRIATKYTRANKHLRSKLTRTCLKYLL 388
Query: 317 DPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNLGPY-LSLLEP 357
DP + YGA+ GLAA GP R+L+LPNL + ++L+P
Sbjct: 389 DPTKPPAVLYGALNGLAAAGGPEAFRVLVLPNLKSFDAAVLQP 431
>gi|432101286|gb|ELK29512.1| Transcription initiation factor TFIID subunit 6 [Myotis davidii]
Length = 611
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 133/351 (37%), Positives = 206/351 (58%), Gaps = 37/351 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD
Sbjct: 72 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLD--- 128
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
VC + AP +QK E P+K + + K
Sbjct: 129 VC--------------------LKAP----KEQQK----AEATEPLKSAKPGQEEDGPLK 160
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRV 238
+ +D +AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+
Sbjct: 161 SKGQGAAPADGK--GEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRM 218
Query: 239 VWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYG 297
V L+ NP + +E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK +
Sbjct: 219 VKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFS 278
Query: 298 HVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
N +Q+R+TKT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 279 TTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 329
>gi|313246848|emb|CBY35707.1| unnamed protein product [Oikopleura dioica]
Length = 452
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 220/367 (59%), Gaps = 27/367 (7%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+T+++ +S+GI++ DAA +A +++++++ I+Q++ K MR+++R L+ DVD AL+
Sbjct: 11 QTIKLFGESVGITSIPEDAARHVAENLKFQLKRIIQDSAKFMRNAKRARLSPRDVDSALR 70
Query: 67 LRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
R +EP+YGF S L +R A G R+L + +D++++ + +E + P I HWL
Sbjct: 71 ARRIEPLYGFTSTDYLPWRFASGGGRELHFNEDREIDLQKFLENTASKLPPPIKIRAHWL 130
Query: 126 AIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGL----------------------PVEIK 163
I+GVQP IPEN P A P + + + + L +E K
Sbjct: 131 VIDGVQPNIPEN-PAPARKPPHDLSAKKLPEDLGKEDKGKDKKNEKKPGDKGQTQALEQK 189
Query: 164 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 223
++H LS E Y+ +IT+ AV R++ + K+AL SLA D+G+H ++P FT F+++ +
Sbjct: 190 PLMRHELSIEQMKYYQEITQAAVGRNEEIR-KEALNSLAEDTGIHAMLPRFTNFISEGIK 248
Query: 224 RGLN--NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWEL 281
+N N +L+ LMR+V LL NP + ++ YLH+++P V++C+V+++L R+ +NHW L
Sbjct: 249 CNINENNLALIIYLMRMVKALLDNPTLSLDMYLHEIIPVVISCVVSRQLCQRIGENHWAL 308
Query: 282 RDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 341
R + A+++A I K + + LQTR+ ++L L AL Q YG++ GL+ LG +V +
Sbjct: 309 RQYAARVLAQISKNFTTTTSMLQTRIVQSLQKPLDRRDAALAQIYGSIVGLSELGSDVTK 368
Query: 342 LLLLPNL 348
+++P L
Sbjct: 369 KIIIPRL 375
>gi|313234616|emb|CBY10571.1| unnamed protein product [Oikopleura dioica]
Length = 452
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 220/367 (59%), Gaps = 27/367 (7%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+T+++ +S+GI++ DAA +A +++++++ I+Q++ K MR+++R L+ DVD AL+
Sbjct: 11 QTIKLFGESVGITSIPEDAARHVAENLKFQLKRIIQDSAKFMRNAKRARLSPRDVDSALR 70
Query: 67 LRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
R +EP+YGF S L +R A G R+L + +D++++ + +E + P I HWL
Sbjct: 71 ARRIEPLYGFTSTDYLPWRFASGGGRELHFNEDREIDLQKFLENTAIKLPPPVKIRAHWL 130
Query: 126 AIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGL----------------------PVEIK 163
I+GVQP IPEN P A P + + + + L +E K
Sbjct: 131 VIDGVQPNIPEN-PAPARKPPHDLSAKKLPEDLGKEDKGKDKKNEKKPGDKGQTQALEQK 189
Query: 164 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 223
++H LS E Y+ +IT+ AV R++ + K+AL SLA D+G+H ++P FT F+++ +
Sbjct: 190 PLMRHELSIEQMKYYQEITQAAVGRNEEIR-KEALNSLAEDTGIHAMLPRFTNFISEGIK 248
Query: 224 RGLN--NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWEL 281
+N N +L+ LMR+V LL NP + ++ YLH+++P V++C+V+++L R+ +NHW L
Sbjct: 249 CNINENNLALIIYLMRMVKALLDNPTLSLDMYLHEIIPVVISCVVSRQLCQRIGENHWAL 308
Query: 282 RDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 341
R + A+++A I K + + LQTR+ ++L L AL Q YG++ GL+ LG +V +
Sbjct: 309 RQYAARVLAQISKNFTTTTSMLQTRIVQSLQKPLDRRDAALAQIYGSIVGLSELGSDVTK 368
Query: 342 LLLLPNL 348
+++P L
Sbjct: 369 KIIIPRL 375
>gi|297287994|ref|XP_002803267.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Macaca mulatta]
Length = 636
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 204/385 (52%), Gaps = 80/385 (20%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 12 TVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 71
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
D ALKL+NVE ++G D
Sbjct: 72 DYALKLKNVEVIWG-----------------------------------------DRQGA 90
Query: 122 CHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGTN 151
HWL+IEG QP IPEN P +A A ++G
Sbjct: 91 AHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATAADGKG 150
Query: 152 NEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSG 206
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD G
Sbjct: 151 KEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAK-RAEALQSIATDPG 209
Query: 207 LHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTC 264
L+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC
Sbjct: 210 LYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTC 269
Query: 265 LVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT 323
+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T
Sbjct: 270 IVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWT 329
Query: 324 QHYGAVQGLAALGPNVVRLLLLPNL 348
YG++ GLA LG +V++ L+LP L
Sbjct: 330 TRYGSIAGLAELGHDVIKTLILPRL 354
>gi|322694809|gb|EFY86629.1| transcription initiation factor TFIID complex 60 kDa subunit
[Metarhizium acridum CQMa 102]
Length = 487
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 223/401 (55%), Gaps = 58/401 (14%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V+ +A+S+GIS+ + +A AL DVEYRI +++ EA++ MR +RRTTLT +DV ALK
Sbjct: 15 DNVKDVAESVGISSLNDEALKALTQDVEYRIGQVIIEALRLMRAARRTTLTVNDVSLALK 74
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLD------- 117
+ +VEP+YG+ S PLR+ A +G + LFY++D++V+F+ +I APLP+ P D
Sbjct: 75 VLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEKLINAPLPKVPRDMNFTGTL 134
Query: 118 ----------TSIV-----CHWLAIEGVQPVIPENAPVQ----------------AIAAP 146
TS + HWLAIEGVQP IP+N A+AA
Sbjct: 135 PVITITWMSLTSFILYKKTAHWLAIEGVQPSIPQNPTTAESRSQELLPKGPGANPALAAL 194
Query: 147 SNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLA 202
+ N V +K VKHI+S+EL LYFDKI + + + V +Q AL S+
Sbjct: 195 AGNDN--------VAVKPSVKHIVSKELILYFDKIQAAILDDNPDEEVVRLRQAALGSVR 246
Query: 203 TDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVV 262
D GLH LVPYF F+ D V+ L++ L +M + L++N + ++PY L +
Sbjct: 247 DDPGLHQLVPYFINFIMDRVTHHLDDTFTLRQMMELTNALIENKSLFLDPYASSLSAPAL 306
Query: 263 TCLVAKRLGN----RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 318
TCL+A++LG + ++LR A LV I ++Y L+ +LT+T L LDP
Sbjct: 307 TCLMARKLGTDDGVDAMKDQYDLRQLAASLVGRIARKYSASNTLLRPKLTRTCLKYFLDP 366
Query: 319 KRALTQHYGAVQG-LAALGPNVVRLLLLPNLGPYLS-LLEP 357
+ YGA+ G L A GP +R+L+L N+ + S +L+P
Sbjct: 367 TKPPAVLYGAIYGLLEAGGPEAIRVLVLRNMKTFDSAILQP 407
>gi|67468804|ref|XP_650399.1| TFIID subunit [Entamoeba histolytica HM-1:IMSS]
gi|56467020|gb|EAL45013.1| TFIID subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407044367|gb|EKE42549.1| TFIID subunit, putative [Entamoeba nuttalli P19]
gi|449702106|gb|EMD42805.1| transcription initiation factor tfiid, putative [Entamoeba
histolytica KU27]
Length = 433
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 190/344 (55%), Gaps = 10/344 (2%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P + ++ + + G S + ++ + E I E+ EA K MRHS+R LT D++
Sbjct: 6 IPLDFIKSMLSANGFEEMSDEMINLISEEAENSISELFNEATKFMRHSKRKILTIQDINS 65
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPL-PRAPLDTSIVC 122
ALKL+ +EP YG+ PL ++R ++F ++ + + + P P D ++ C
Sbjct: 66 ALKLKKLEPYYGYNPSIPLYYQRLPSNHEMFVRQEQSIGLNEAVHCQFFPDIPRDINVGC 125
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
HWL +EGVQP+IP+N PS +QK +E K ++H LS+ELQ+Y+D +
Sbjct: 126 HWLTVEGVQPLIPQN--------PSVVVQEKQKQEETIETKPIIQHSLSKELQMYYDMVV 177
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
E+ ++ ++ + L S+ TDSGL L PYF ++++ L + +L ++ +V +
Sbjct: 178 EI-LNTNNKEKIDECLDSVRTDSGLQQLTPYFIRYISNHTLANLGSLEILANMLSLVNAM 236
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNT 302
+N +I +EPYLHQL P ++T +V K++G DNHW +R A +V + RY Y
Sbjct: 237 RENQNINLEPYLHQLFPVILTLVVTKQIGTNSYDNHWNIRVQAAAIVKKLRDRYSEKYGR 296
Query: 303 LQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 346
L RL +T L A+ D + LT YG + G+ A+GP V LL+P
Sbjct: 297 LHARLLQTYLQAITDATKPLTTQYGGIVGITAMGPRAVYHLLVP 340
>gi|116199019|ref|XP_001225321.1| hypothetical protein CHGG_07665 [Chaetomium globosum CBS 148.51]
gi|88178944|gb|EAQ86412.1| hypothetical protein CHGG_07665 [Chaetomium globosum CBS 148.51]
Length = 451
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 211/366 (57%), Gaps = 37/366 (10%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ V +A SIGIS + + LA DVEYRI +++ E+++ MR + RTTLT DV +ALK
Sbjct: 14 DNVRDVADSIGIS-LADEPLRVLAQDVEYRIGQVIVESLRFMRAANRTTLTVQDVSQALK 72
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLR+ A +G + LFY+DD++V+F+ VI APLP+ P D S HW
Sbjct: 73 VLDVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEVDFEKVINAPLPKVPRDMSFTAHW 132
Query: 125 LAIEGVQPVIPENA-----------PVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRE 173
LA+EGVQP IP+N P A P+ G+ Q+ L +
Sbjct: 133 LAVEGVQPSIPQNPTTAETSSKDLLPKGPGANPALGSPRGQRQRLVPAVG---------- 182
Query: 174 LQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLF 233
Q + T+ +R L + AL S+ +D GLH L+PYF F+ ++V+ L++ +L
Sbjct: 183 -QTRHQQRTDTEKTR----LREAALESVRSDPGLHQLLPYFVNFITNQVTHHLDDLFVLR 237
Query: 234 ALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD-------NHWELRDFTA 286
+M + ++QNP++ ++PY L V+TCL++++LG AD + LR+ A
Sbjct: 238 QMMELAEAVIQNPNLFLDPYASALSAPVLTCLMSRKLGGAAADEGSDTLREQYGLRELAA 297
Query: 287 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLL 345
L+ + ++YG L+ +LT+T L LDP R L +GA++G+AA GP VR+L+L
Sbjct: 298 GLLEMVARKYGATNALLRPKLTRTCLKHFLDPTRPLAVLFGAIRGVAASGGPEAVRVLVL 357
Query: 346 PNLGPY 351
PNL +
Sbjct: 358 PNLKSF 363
>gi|322778974|gb|EFZ09385.1| hypothetical protein SINV_14157 [Solenopsis invicta]
Length = 606
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 198/342 (57%), Gaps = 34/342 (9%)
Query: 40 IMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDD 98
+Q+A K MRH +R +T D+D +LK++N+EP YGF + + FR A G R+L ++++
Sbjct: 4 FLQDAAKFMRHGKRQRMTAHDIDHSLKIKNIEPTYGFFAKDYIPFRFASGGGRELHFVEE 63
Query: 99 KDVEFKDVIEA----PLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----VQAIAA--PS 147
K+++ +V+ P+ PL+ ++ HWL I+GVQP IPEN P VQ + + P+
Sbjct: 64 KEIDLNEVVATAGGQSWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKEVQKLESVDPT 123
Query: 148 NGTNNEQKDGL-----------------PVEIKLPVKHILSRELQLYFDKITELAVSRSD 190
+++ ++ V +K H LS E QLY+ +ITE V SD
Sbjct: 124 TKLSSKNQNIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SD 182
Query: 191 SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHI 248
+AL SL+ D GLH ++ F+A+ V + N+ +LL LMR+V LL NP +
Sbjct: 183 EARRAEALQSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSL 242
Query: 249 QIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRL 307
+E YLH+L+PSV TC+V+++L R DNHW LRDF ++L+A ICK + N +QTR+
Sbjct: 243 YLEKYLHELIPSVATCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRV 302
Query: 308 TKTLLNALL-DPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
T+ AL + + L YGA++GL LGP V++ L++P +
Sbjct: 303 TRMFSQALAKNSQTPLASLYGAIEGLCELGPEVIKALVIPKI 344
>gi|332866943|ref|XP_003318661.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
4 [Pan troglodytes]
gi|397489552|ref|XP_003815789.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
5 [Pan paniscus]
Length = 601
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 194/321 (60%), Gaps = 21/321 (6%)
Query: 48 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 106
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 107 IEAPLPRAPLDTSIVC--------HWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK 155
I PLPR PLD + ++ +P E+ P++ A ++G E+K
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKK 120
Query: 156 -----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 210
+G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ +
Sbjct: 121 APPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQM 179
Query: 211 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 268
+P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V++
Sbjct: 180 LPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSR 239
Query: 269 RLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 327
+L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG
Sbjct: 240 QLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYG 299
Query: 328 AVQGLAALGPNVVRLLLLPNL 348
++ GLA LG +V++ L+LP L
Sbjct: 300 SIAGLAELGHDVIKTLILPRL 320
>gi|402863000|ref|XP_003895825.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
6 [Papio anubis]
Length = 602
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 194/321 (60%), Gaps = 21/321 (6%)
Query: 48 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 106
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 107 IEAPLPRAPLDTSIVC--------HWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK 155
I PLPR PLD + ++ +P E+ P++ A ++G E+K
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATAADGKGKEKK 120
Query: 156 -----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 210
+G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ +
Sbjct: 121 APPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQM 179
Query: 211 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 268
+P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V++
Sbjct: 180 LPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSR 239
Query: 269 RLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 327
+L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG
Sbjct: 240 QLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYG 299
Query: 328 AVQGLAALGPNVVRLLLLPNL 348
++ GLA LG +V++ L+LP L
Sbjct: 300 SIAGLAELGHDVIKTLILPRL 320
>gi|193783615|dbj|BAG53526.1| unnamed protein product [Homo sapiens]
Length = 601
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 194/321 (60%), Gaps = 21/321 (6%)
Query: 48 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 106
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 107 IEAPLPRAPLDTSIVC--------HWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK 155
I PLPR PLD + ++ +P E+ P++ A ++G E+K
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKK 120
Query: 156 -----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 210
+G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ +
Sbjct: 121 APPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQM 179
Query: 211 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 268
+P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V++
Sbjct: 180 LPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSR 239
Query: 269 RLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 327
+L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG
Sbjct: 240 QLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYG 299
Query: 328 AVQGLAALGPNVVRLLLLPNL 348
++ GLA LG +V++ L+LP L
Sbjct: 300 SIAGLAELGHDVIKTLILPRL 320
>gi|426357186|ref|XP_004045928.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Gorilla gorilla gorilla]
Length = 601
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 194/321 (60%), Gaps = 21/321 (6%)
Query: 48 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 106
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 107 IEAPLPRAPLDTSIVC--------HWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK 155
I PLPR PLD + ++ +P E+ P++ A ++G E+K
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKK 120
Query: 156 -----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 210
+G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ +
Sbjct: 121 APPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQM 179
Query: 211 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 268
+P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V++
Sbjct: 180 LPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSR 239
Query: 269 RLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 327
+L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG
Sbjct: 240 QLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYG 299
Query: 328 AVQGLAALGPNVVRLLLLPNL 348
++ GLA LG +V++ L+LP L
Sbjct: 300 SIAGLAELGHDVIKTLILPRL 320
>gi|403285900|ref|XP_003934248.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
4 [Saimiri boliviensis boliviensis]
Length = 602
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 194/321 (60%), Gaps = 21/321 (6%)
Query: 48 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 106
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 107 IEAPLPRAPLDTSIVC--------HWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK 155
I PLPR PLD + ++ +P E+ P++ AA ++ E+K
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAATADSKGKEKK 120
Query: 156 -----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 210
+G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ +
Sbjct: 121 APPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQM 179
Query: 211 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 268
+P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V++
Sbjct: 180 LPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSR 239
Query: 269 RLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 327
+L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG
Sbjct: 240 QLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYG 299
Query: 328 AVQGLAALGPNVVRLLLLPNL 348
++ GLA LG +V++ L+LP L
Sbjct: 300 SIAGLAELGHDVIKTLILPRL 320
>gi|449329892|gb|AGE96160.1| transcription initiation factor TFIId70kDa subunit [Encephalitozoon
cuniculi]
Length = 356
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 203/351 (57%), Gaps = 24/351 (6%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
KET++ AQS GISN DA L+ D+EYRI+E+ QE K M S+RT L+ DD++ AL
Sbjct: 5 KETLKSFAQSKGISNIDDDALRVLSQDLEYRIKEVCQEGSKFMVGSKRTKLSIDDINYAL 64
Query: 66 KLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
RNV+P++G+ L FR +++Y+ D++++ ++ ++ PLP+ PL SI HWL
Sbjct: 65 TSRNVDPLFGYDPQESLVFRGLPS--NVYYVPDEEIDLEEYLDRPLPKVPLRVSIQSHWL 122
Query: 126 AIEGVQPVIPENAPV---QAIAAPSN-GTNNEQKDGLPVEIKLPVKHILSRELQLYFDKI 181
AIEGVQP IP N P+ + +A GT E+ E+K KH+L++EL +YFDK+
Sbjct: 123 AIEGVQPQIPYN-PILLEKPVAKKDTLGTYQEE-----AELKSQNKHMLTKELSMYFDKV 176
Query: 182 TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWN 241
+ S + A+ L +SG+ LVPYF + +++ + + N L ++ V +
Sbjct: 177 IQAMESDEQT-----AMECLHNESGIQQLVPYFVHHFNEQIVKNIKNKEKLMTVVMVYSS 231
Query: 242 LLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYN 301
LL+N +I ++PYLHQ++PS++TC++ K + + ++R A +V + + Y
Sbjct: 232 LLKNKYIFVDPYLHQILPSLITCVIGKNVDD-------DVRKVAADVVKYVFSNFSSSYK 284
Query: 302 TLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYL 352
TL R+ TL A LD ++ + YGA+ L+ L +VV ++ P Y+
Sbjct: 285 TLAPRIINTLSKAWLDREKTESTQYGALLCLSILSKHVVETVIKPKADYYV 335
>gi|303391124|ref|XP_003073792.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
intestinalis ATCC 50506]
gi|303302940|gb|ADM12432.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
intestinalis ATCC 50506]
Length = 356
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 205/351 (58%), Gaps = 24/351 (6%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
KET++ AQS GISN DA L+ D+EYRI+E+ QE K M S+RT L+ DD++ AL
Sbjct: 5 KETLKSFAQSKGISNIDDDALRVLSQDLEYRIKEVCQEGSKFMVGSKRTKLSIDDINYAL 64
Query: 66 KLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
RNV+P++G+ L FR +++Y+ D++++ ++ ++ PLP+ PL SI HWL
Sbjct: 65 ISRNVDPLFGYDPQESLVFRGLPS--NVYYVPDEEIDLEEYLDRPLPKIPLRPSIQSHWL 122
Query: 126 AIEGVQPVIPENAPV---QAIAAPSN-GTNNEQKDGLPVEIKLPVKHILSRELQLYFDKI 181
AIEGVQP IP N P+ + +A GT E+ E+K +H+L++EL +YFDK+
Sbjct: 123 AIEGVQPQIPYN-PILLEKPVAKKDTLGTYQEE-----AELKSQNRHMLTKELSMYFDKV 176
Query: 182 TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWN 241
+ A+ + + A+ L +SG+ LVPYF + +++ + + N L +M V +
Sbjct: 177 IQ-AMETDEEI----AMECLHNESGIQQLVPYFIHHFNEQIVKNIKNKEKLMTVMMVYNS 231
Query: 242 LLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYN 301
LL+N +I I+PYLHQ++PS++TC++ K + + E+R A +V + + Y
Sbjct: 232 LLRNKYIFIDPYLHQILPSLITCVIGKSVDD-------EVRRVAADVVKYVFSNFSSSYK 284
Query: 302 TLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYL 352
TL R+ TL A LD ++ + YGA+ L+ L +VV ++ P Y+
Sbjct: 285 TLAPRIINTLSKAWLDKEKTESTQYGALLCLSLLSKHVVETVVKPKADYYV 335
>gi|19074721|ref|NP_586227.1| TRANSCRIPTION INITIATION FACTOR TFIID 70kDa SUBUNIT
[Encephalitozoon cuniculi GB-M1]
gi|19069363|emb|CAD25831.1| TRANSCRIPTION INITIATION FACTOR TFIID 70kDa SUBUNIT
[Encephalitozoon cuniculi GB-M1]
Length = 356
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 203/351 (57%), Gaps = 24/351 (6%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
KET++ AQS GISN DA L+ D+EYRI+E+ QE K M S+RT L+ DD++ AL
Sbjct: 5 KETLKSFAQSKGISNIDDDALRVLSQDLEYRIKEVCQEGSKFMVGSKRTKLSIDDINYAL 64
Query: 66 KLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
RNV+P++G+ L FR +++Y+ D++++ ++ ++ PLP+ PL SI HWL
Sbjct: 65 TSRNVDPLFGYDPQESLVFRGLPS--NVYYVPDEEIDLEEYLDRPLPKVPLRVSIQSHWL 122
Query: 126 AIEGVQPVIPENAPV---QAIAAPSN-GTNNEQKDGLPVEIKLPVKHILSRELQLYFDKI 181
AIEGVQP IP N P+ + +A GT E+ E+K KH+L++EL +YFDK+
Sbjct: 123 AIEGVQPQIPYN-PILLEKPVAKKDTLGTYQEE-----AELKSQNKHMLTKELGMYFDKV 176
Query: 182 TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWN 241
+ S + A+ L +SG+ LVPYF + +++ + + N L ++ V +
Sbjct: 177 IQAMESDEQT-----AMECLHNESGIQQLVPYFVHHFNEQIVKNIKNKEKLMTVVMVYSS 231
Query: 242 LLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYN 301
LL+N +I ++PYLHQ++PS++TC++ K + + ++R A +V + + Y
Sbjct: 232 LLKNKYIFVDPYLHQILPSLITCVIGKNVDD-------DVRKVAADVVKYVFSNFSSSYK 284
Query: 302 TLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYL 352
TL R+ TL A LD ++ + YGA+ L+ L +VV ++ P Y+
Sbjct: 285 TLAPRIINTLSKAWLDREKTESTQYGALFCLSILSKHVVETVIKPKADYYV 335
>gi|440301765|gb|ELP94151.1| transcription initiation factor tfiid, putative [Entamoeba invadens
IP1]
Length = 435
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 195/346 (56%), Gaps = 10/346 (2%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P + V+ + + G+ + S + ++ + E + E+ E+ K MRHSRR L+ +D++
Sbjct: 11 IPLDYVKSLLAANGLPDLSDEMVTLISEEAEGALTELFTESSKFMRHSRRKVLSINDINS 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPL-PRAPLDTSIVC 122
ALK++ +EP YG+ PL ++R ++F ++ ++ + + + P P D +I C
Sbjct: 71 ALKVKKMEPYYGYNPAVPLYYQRLHSNHEMFVRQEQTIDLSESVHSQFFPDIPRDINIGC 130
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
HWL ++GVQP IP+N PS + K +E K ++H LS+ELQ+Y+D +
Sbjct: 131 HWLTVDGVQPQIPQN--------PSVFVAEKVKKEETIETKPIIRHSLSKELQMYYDMVV 182
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
E+ ++ + L S+ +DSGL L PYF ++++ V LN +L ++ +V L
Sbjct: 183 EV-LNTTQKEKISSCLDSVKSDSGLQQLTPYFIRYISNHVLTNLNTLDILSNMLGLVNAL 241
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNT 302
+N ++ +EPYLHQL P ++T +V K++G ++HWE+R AK+V + +RY Y
Sbjct: 242 SENQNVNLEPYLHQLFPVILTLVVTKQIGTGAMEDHWEIRTRAAKIVKKLSERYSDKYGR 301
Query: 303 LQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
L RL +T L A+ + + LT YG + G+ A+G V LL+P +
Sbjct: 302 LNARLLQTYLKAITEATKPLTTQYGGIVGITAMGERAVFHLLVPAM 347
>gi|396082306|gb|AFN83916.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
romaleae SJ-2008]
Length = 356
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 206/351 (58%), Gaps = 24/351 (6%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
KET++ AQS GISN DA L+ D+EYRI+E+ QE K M S+RT L+ DD++ AL
Sbjct: 5 KETLKSFAQSKGISNIDDDALRVLSQDLEYRIKEVCQEGSKFMVGSKRTKLSIDDINYAL 64
Query: 66 KLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
RNV+P++G+ L FR +++Y+ D++++ ++ ++ PLP+ PL SI HWL
Sbjct: 65 ISRNVDPLFGYDPQESLVFRGLPS--NVYYVPDEEIDLEEYLDRPLPKIPLRPSIQSHWL 122
Query: 126 AIEGVQPVIPENAPV---QAIAAPSN-GTNNEQKDGLPVEIKLPVKHILSRELQLYFDKI 181
AIEGVQP IP N P+ + +A GT E+ E+K +H+L++EL +YFDK+
Sbjct: 123 AIEGVQPQIPYN-PILLEKPVAKKDTLGTYQEE-----AELKSQNRHMLTKELGMYFDKV 176
Query: 182 TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWN 241
+ A+ + + A+ L +SG+ LVPYF + +++ + + N L ++ V +
Sbjct: 177 IQ-AMETDEQI----AMECLHNESGIQQLVPYFVHHFNEQIMKNIKNKERLMTVIMVYNS 231
Query: 242 LLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYN 301
LL+N +I I+PYLHQ++PS++TC++ K + + E+R A +V + + Y
Sbjct: 232 LLRNKYIFIDPYLHQVLPSLITCVIGKSVDD-------EVRRVAADVVKYVFSNFSGSYK 284
Query: 302 TLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYL 352
TL R+ TL A LD ++ + YGA+ L++L +VV ++ P Y+
Sbjct: 285 TLAPRIINTLSKAWLDKEKTESTQYGALLCLSSLSKHVVETVIKPKTDYYV 335
>gi|401827789|ref|XP_003888187.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
hellem ATCC 50504]
gi|392999387|gb|AFM99206.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
hellem ATCC 50504]
Length = 356
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 205/350 (58%), Gaps = 24/350 (6%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
KET++ AQS GISN DA L+ D+EYRI+E+ QE K M S+RT L+ DD++ AL
Sbjct: 5 KETLKSFAQSKGISNIDDDALRVLSQDLEYRIKEVCQEGSKFMVGSKRTKLSIDDINYAL 64
Query: 66 KLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
RNV+P++G+ L FR +++Y+ D++++ ++ ++ PLP+ PL SI HWL
Sbjct: 65 ISRNVDPLFGYDPQESLVFRGLPS--NVYYVPDEEIDLEEYLDRPLPKIPLRPSIQSHWL 122
Query: 126 AIEGVQPVIPENAPV---QAIAAPSN-GTNNEQKDGLPVEIKLPVKHILSRELQLYFDKI 181
AIEGVQP IP N P+ + +A GT E+ E+K +H+L++EL +YFDK+
Sbjct: 123 AIEGVQPQIPYN-PILLEKPVAKKDTLGTYQEE-----AELKSQNRHMLTKELSMYFDKV 176
Query: 182 TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWN 241
+ A+ + + A+ L +SG+ LVPYF + +++ + + N L ++ V +
Sbjct: 177 IQ-AMETDEQI----AMECLHNESGIQQLVPYFVHHFNEQIMKNIKNKEKLMTVIMVYNS 231
Query: 242 LLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYN 301
LL+N +I I+PYLHQ++PS++TC++ K + + E+R + +V + + Y
Sbjct: 232 LLRNKYIFIDPYLHQVLPSLITCVIGKSVDD-------EVRRVASDVVKYVFSNFSGSYK 284
Query: 302 TLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPY 351
TL R+ TL A LD ++ + YGA+ L++L +VV ++ P Y
Sbjct: 285 TLAPRIINTLSKAWLDKEKTESTQYGALLCLSSLSKHVVETVIKPKADYY 334
>gi|440494317|gb|ELQ76716.1| Transcription initiation factor TFIID, subunit TAF6, partial
[Trachipleistophora hominis]
Length = 389
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 196/349 (56%), Gaps = 13/349 (3%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
K++ AQ+ G+ +A LA DVEYR++E+ QEA K M S+RT L+ DDV+ AL
Sbjct: 29 KDSFLAYAQAKGLE-IEDEAVSILAQDVEYRVKELCQEAAKFMLFSKRTKLSIDDVNNAL 87
Query: 66 KLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
RNV+P++G+ L F+ I +FY+ D++V+ +D + PLP+ PL I HWL
Sbjct: 88 VTRNVDPIFGYDPKDNLIFKNDIVKSAIFYVPDEEVDLEDFLNQPLPKMPLKPKITSHWL 147
Query: 126 AIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELA 185
AIEGVQP IP+N + + PS + E+K KH++S+ELQLY++KI
Sbjct: 148 AIEGVQPQIPQNPII--MEKPSLKQDPLVTYTEESELKQTTKHVISKELQLYYEKILSFL 205
Query: 186 VSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQN 245
L A+ L T+SG+ L+PY + +++ + + + LL + +LLQN
Sbjct: 206 EDNEKITL---AIECLKTESGIQQLIPYLIQNINEKILKNMES-DLLSNFILFYHSLLQN 261
Query: 246 PHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQT 305
HI I+PYLHQ++PS++TC++ KR+ N ++R A+ + + +Y Y+TL
Sbjct: 262 EHIFIDPYLHQIIPSLLTCIIGKRVKN------VDIRKLAAETIKYVYDKYAITYDTLGP 315
Query: 306 RLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSL 354
R+ KTL LD ++ HY A+ L+ L NVV ++L Y+ +
Sbjct: 316 RIIKTLTKVWLDKDKSEDAHYSALFTLSILSRNVVSSVILKEKDGYVEM 364
>gi|312071628|ref|XP_003138696.1| hypothetical protein LOAG_03111 [Loa loa]
gi|307766142|gb|EFO25376.1| hypothetical protein LOAG_03111 [Loa loa]
Length = 616
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 132/360 (36%), Positives = 207/360 (57%), Gaps = 26/360 (7%)
Query: 9 VEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLR 68
V+V+A+S+GI+ A +A Y ++ +++ A K H RR +T +D+D AL +
Sbjct: 44 VKVVAESVGIAGLPDVCASQIAVQTTYAVKMVIEHAKKFAVHGRRKRVTAEDIDSALAMD 103
Query: 69 NVEPVYGFA--SGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLA 126
P++GF G P RF ++G RDLF DD+DVE V+ AP + PL+T+I HWL
Sbjct: 104 GYPPLFGFTVKEGLPFRFAGSMG-RDLFVTDDRDVEITPVVNAPAAKLPLETNIKSHWLV 162
Query: 127 IEGVQPVIPEN-AP--------VQAIAAPSNGTN----NEQKDGL----PVEIKLPVKHI 169
I+GVQP +PEN AP V AI + T ++ GL V+IK H
Sbjct: 163 IDGVQPAVPENPAPVVQKETPVVVAIEKATVDTGLSILSKAHRGLQQTEQVQIKTTSTHA 222
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--N 227
LS E Q++F +ITE A+ SD +AL SL TD+GL L+P F+ + + V + +
Sbjct: 223 LSVEQQVFFKEITE-AIMGSDDTRRTEALYSLQTDAGLQQLLPRFSVAIVEGVRCNIVQH 281
Query: 228 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTA 286
N ++L LMR++ +L NP + +E LH+L+PSV++C+++++L R DNHW LR+F++
Sbjct: 282 NLAILIYLMRMIQSLANNPALSLERCLHELLPSVLSCILSRQLCARPETDNHWALREFSS 341
Query: 287 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 346
+L+A IC+ Y + L++R+T+ L D L YG++ L LG + V +++P
Sbjct: 342 RLLANICRSYK--ISHLRSRVTQVLAQVWRDENCTLAALYGSLYALNELGVDTVHSVVIP 399
>gi|393242954|gb|EJD50470.1| TAF-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 504
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 205/377 (54%), Gaps = 23/377 (6%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
+ I E + IA+++GIS A ALA DVEYRI +I++EA + MRHSRRTTLTT D
Sbjct: 15 VGIFKPEAIRDIAEAMGISTLPDGVASALASDVEYRIHQIVEEAARFMRHSRRTTLTTGD 74
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAI----GYRDLFYLDDKDVEFKDVIEAPLPRAPL 116
+D+AL++ N+EP+YG + FRRA G +++++D +++F V+ P
Sbjct: 75 IDQALRVLNIEPLYGHNTHTHPPFRRAHVMVPGQAPVYFVEDTEIDFDKVLHEEKVFLPK 134
Query: 117 DTSIVCHWLAIEGVQPVIPENAP------VQAIA-APSNGTNNEQKDGLPVEIKLPVKHI 169
+ HWLA+EGVQP+IPEN P IA P+ T + K +H+
Sbjct: 135 PVTWTAHWLAVEGVQPMIPENPPQAKTDAASGIAKVPAAPTAARKTGTGAAAKKAAARHV 194
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--- 226
LSRELQLY++++T + SDS AL SL D+GL L+PY +V + V L
Sbjct: 195 LSRELQLYYNRLTTSLLPPSDSSKRTAALASLRMDAGLQALLPYLVRWVGERVVHCLKSP 254
Query: 227 -----NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWEL 281
+N L ++ V+ LL N + +EPYLHQ++P V++ L+ L
Sbjct: 255 GSTEADNGRTLEVMLDVLHALLDNAALFVEPYLHQMLPPVLSALLTSSLPAN--SRSSAT 312
Query: 282 RDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 341
R A++VA + + Y +L RLTKTLL ALL ++ GAV+GLA +G VR
Sbjct: 313 RAHAAQIVARLLTTHSTTYPSLAPRLTKTLLVALLARGKSAGTREGAVRGLAGIGKEAVR 372
Query: 342 LLLLPNLGPYLSLLEPE 358
+ L+ G L+LL E
Sbjct: 373 MGLVDAGG--LTLLAQE 387
>gi|66805975|ref|XP_636709.1| TATA-binding protein-associated-factor [Dictyostelium discoideum
AX4]
gi|60465107|gb|EAL63207.1| TATA-binding protein-associated-factor [Dictyostelium discoideum
AX4]
Length = 542
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 158/227 (69%), Gaps = 2/227 (0%)
Query: 162 IKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADE 221
+K VKH+LS+E+Q++++KIT +V + LF AL SL +DS LH L+PYF F++ +
Sbjct: 243 VKPTVKHVLSKEIQMFYEKITN-SVKSDNQKLFDAALHSLKSDSSLHQLLPYFINFISVQ 301
Query: 222 VSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWEL 281
V++ L N LL LM++ +L++ H++ E YLHQLMPS++TCLV K+L N ++NHWEL
Sbjct: 302 VTQNLTNLELLNRLMKMAQAILESKHLKPELYLHQLMPSILTCLVGKKLCNSPSENHWEL 361
Query: 282 RDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 341
RDF A+LV+ +C+++G VY++LQ R+TKTL+ L D + LT HYGA+ GL+ LG NV++
Sbjct: 362 RDFAARLVSFVCRKFGDVYSSLQGRITKTLVQTLHDTTKPLTTHYGAIVGLSGLGRNVIQ 421
Query: 342 LLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCI 388
LLLP + Y LLEPE L N +K EA RV +++ A G+ +
Sbjct: 422 FLLLPYVPKYYKLLEPE-LNNNLSNPIKSMEANRVLNSIIDATGKFL 467
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 103/142 (72%), Gaps = 5/142 (3%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS++P +T+++IA+S GISN + A LA DVEYRIREI QEAIK M+HS+R L+TDD
Sbjct: 1 MSVLPNDTIKIIAESAGISNLPDEIAQQLASDVEYRIREIAQEAIKFMKHSKRDHLSTDD 60
Query: 61 VDEALKLRNVEPVYGFASGGP----LRFRR-AIGYRDLFYLDDKDVEFKDVIEAPLPRAP 115
++ AL LRN+E +YG++ L+F++ + +++L+DK++ F+++ PLP+ P
Sbjct: 61 INNALGLRNIEQLYGYSCSANDHSLLKFQKTTTTTQAIYFLNDKEMTFQEIASQPLPKVP 120
Query: 116 LDTSIVCHWLAIEGVQPVIPEN 137
D S+ HWLA+EGVQP+IP+N
Sbjct: 121 RDPSLSAHWLALEGVQPLIPQN 142
>gi|395330883|gb|EJF63265.1| TAF-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 481
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 201/382 (52%), Gaps = 42/382 (10%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
++V +A+S+ + N A ALA DVEYRI+++++EA + MRH++RTTLTT D+D+AL+
Sbjct: 22 DSVRDVAESLNLPNLPDAVASALASDVEYRIQQVVEEAARFMRHAKRTTLTTADIDQALR 81
Query: 67 LRNVEPVYGFASGGPLRFRRAIGYRDL------FYLDDKDVEFKDVIEAPLPRAPLDTSI 120
+ N+EP+YG P FRRA+ + + ++++D+++EF VI P S
Sbjct: 82 VLNIEPLYGHFPHNPPAFRRALPFPQMQTAGSVYFVEDEEIEFDRVIREEKISMPKGVSW 141
Query: 121 VCHWLAIEGVQPVIPENAPVQA------IAAPSNGTNNE-------------------QK 155
HWLA+EGVQP+IPEN P AA GT N Q
Sbjct: 142 TAHWLAVEGVQPLIPENPPAAPREIDPDSAAAKTGTANGVSGSVFPLTPPSSDRPSPIQS 201
Query: 156 DGLPVEIKLPVKHILSRELQLYFDKIT-ELAVSRSDSVLFKQALVSLATDSGLHPLVPYF 214
+ + VK LSRELQLY+ ++T L SD AL SL D+GL PL+ Y
Sbjct: 202 SKQTQQQNILVKQTLSRELQLYYTRLTSSLLPPTSDPAKRTAALASLRHDAGLSPLLSYL 261
Query: 215 TYFVADEVSRGLNNYS-------LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVA 267
++V + V L S LL + V+ LL N + +EPYLHQ++PSV + L+
Sbjct: 262 VHWVGEGVVNTLRGGSQTETDGKLLEVYLDVIAALLDNQTLGVEPYLHQILPSVFSILLY 321
Query: 268 KRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 327
L N LR A+++A + Y Y L T++ KTL+ L+D K++ H G
Sbjct: 322 SSLP---PSNAIHLRTTAAQILAHLLTHYSMTYPGLPTKIVKTLIVGLIDNKKSRATHEG 378
Query: 328 AVQGLAALGPNVVRLLLLPNLG 349
A++GL A+G +R L+ G
Sbjct: 379 AIRGLMAIGKEALRQGLVNRSG 400
>gi|324508063|gb|ADY43409.1| Transcription initiation factor TFIID subunit 6 [Ascaris suum]
Length = 628
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 202/361 (55%), Gaps = 27/361 (7%)
Query: 9 VEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLR 68
V++ ++IGI+ D A +A Y +EI+ +A K H RR L DD+D+AL R
Sbjct: 52 VKMAGETIGITGLPDDCASQIAASTTYVFKEIVDQARKFAVHGRRKRLVADDIDDALASR 111
Query: 69 NVEPVYGFAS--GGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLA 126
P +GF++ G P R + G RDLF DD+D++ ++ AP + PLD +I HWL
Sbjct: 112 GRPPQFGFSAKEGLPFRLIGSTG-RDLFVTDDRDIDLAAIVNAPPAKVPLDATIKAHWLV 170
Query: 127 IEGVQPVIPEN--------APVQAIAAPSNGTN----------NEQKDGLPVEIKLPVKH 168
I+G QP +PEN V +IA + + + V+IK H
Sbjct: 171 IDGEQPAVPENPTPILEEDPTVTSIAEGAEAIDFGPTILSQAGRTVRKTEQVQIKTMTTH 230
Query: 169 ILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL-- 226
LS E Q++F +ITE A+ SD +AL SL TD+G+ L+P F+ +A+ V +
Sbjct: 231 ALSVEQQIFFKEITE-AIMGSDDARRTEALHSLQTDAGIQVLLPRFSLAIAEGVRCNIVH 289
Query: 227 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFT 285
+N ++L LMR++ +L NP + ++ LH+L+PS+++C+++K+L R DNHW LR+F+
Sbjct: 290 HNLAILIYLMRMIQSLASNPALNLDRCLHELLPSILSCILSKQLCARPDTDNHWALREFS 349
Query: 286 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 345
++L++ IC+ Y N L++R+T+ L + L+ YG++ L LG + +R +++
Sbjct: 350 SRLLSTICRSYN--VNGLRSRVTQVLTRVWRNEHCTLSTLYGSLYALNELGVDTIRAVVI 407
Query: 346 P 346
P
Sbjct: 408 P 408
>gi|336378238|gb|EGO19397.1| hypothetical protein SERLADRAFT_364083 [Serpula lacrymans var.
lacrymans S7.9]
Length = 473
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 209/376 (55%), Gaps = 36/376 (9%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+V+ +A+S+GISN S A +LA DVEYR+ ++++EA + MRH RRTT+TT D+D+AL+
Sbjct: 20 ESVKDVAESLGISNLSDTVASSLAADVEYRMHQVIEEASRFMRHGRRTTMTTSDIDQALR 79
Query: 67 LRNVEPVYGFASGGPLRFRRAIGYRDL------FYLDDKDVEFKDVIEAPLPRAPLDTSI 120
+ N+EP+YG S P FRRA+ + L ++++D++++F V+ P +
Sbjct: 80 VLNIEPLYGHNSFNPPAFRRALPFPQLPTVGPVYFVEDEEIDFDRVLREEKITVPKGVNW 139
Query: 121 VCHWLAIEGVQPVIPENAPV-------QAIAA-------------PSNGTNNEQKDGLPV 160
HWLA+EGVQP+IPEN P Q + PS+ + N+++
Sbjct: 140 TAHWLAVEGVQPLIPENPPAIPRDTDQQEVTKSPPISNTGFPPTPPSDRSTNKKQQQQQQ 199
Query: 161 EIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD 220
+ + VK +LSRELQLY+ ++T + SD AL SL D+GL L+PY +V +
Sbjct: 200 QQQQLVKQVLSRELQLYYTRLTTSLLPPSDFAKRTAALASLRHDAGLQALLPYLIRWVGE 259
Query: 221 EVSRGL-------NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 273
V L N+ +L ++ VV +L+N + IEPYLHQ++P +++ L+ L
Sbjct: 260 SVVNALKDSSDSDNDGKVLEVMLHVVSAILENSALFIEPYLHQILPPILSTLLHSFLPPS 319
Query: 274 LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 333
A LR ++ ++ + ++ Y +L R+ KTLL AL+ P ++ GA++GL
Sbjct: 320 YAT---LLRTMASQTLSRLLTQHSTTYPSLSPRIMKTLLLALISPDKSKNTREGAIRGLI 376
Query: 334 ALGPNVVRLLLLPNLG 349
+G VR L+ G
Sbjct: 377 GIGKEAVRKGLVEGGG 392
>gi|393213433|gb|EJC98929.1| TAF-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 484
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 202/383 (52%), Gaps = 44/383 (11%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+++ +A+S GISN S A ALA DVEYR+ ++++EA + RH+RRTT+TT D+D+AL+
Sbjct: 19 ESIKDVAESFGISNLSEAIASALASDVEYRMHQVIEEAARFTRHARRTTMTTSDIDQALR 78
Query: 67 LRNVEPVYGFASGGPLRFRRAIGYRD------LFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
+ N+EP+YG A P FRRA+ + +++++D++++F V+ P S
Sbjct: 79 VLNIEPLYGHAPHNPPTFRRALPFPSAPTAGPVYFVEDEEIDFDRVLREEKITLPKPASY 138
Query: 121 VCHWLAIEGVQPVIPENAPVQA-------IAA------PSNGTNNEQKDGLPVE------ 161
HWLA+EGVQP +PEN P IA+ P NGT P
Sbjct: 139 TAHWLAVEGVQPNVPENPPAAERRDAEPDIASAKLSTPPRNGTQFPPTPPSPSRNASFNS 198
Query: 162 ---IKLPVKHILSRELQLYFDKITELAVSRS-----DSVLFKQALVSLATDSGLHPLVPY 213
+L VK +LSRELQLY+ ++T + + D AL SL D+GL L+PY
Sbjct: 199 TKPNQLLVKQVLSRELQLYYTRLTSTLMPPTLMPPADDTRKAAALSSLRNDAGLQTLLPY 258
Query: 214 FTYFVADEV-------SRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLV 266
+V D V + N+ L + V+ LL N + +EPYLHQ++P +++ L
Sbjct: 259 LVKWVGDGVIAILRDTNHSENDGRALEVYLEVIGALLDNSTLFVEPYLHQMLPPLLSIL- 317
Query: 267 AKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHY 326
L L N LR ++ ++ + ++ Y +L R+ KTLL ALL P ++
Sbjct: 318 ---LHTSLPSNSTHLRIMASQTLSHLLTQHSTTYPSLSPRIMKTLLLALLSPGKSKGTRE 374
Query: 327 GAVQGLAALGPNVVRLLLLPNLG 349
GAV+GL +G VR L+ G
Sbjct: 375 GAVRGLIGVGKEAVRKGLVEGGG 397
>gi|323333660|gb|EGA75053.1| Taf6p [Saccharomyces cerevisiae AWRI796]
Length = 335
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 185/321 (57%), Gaps = 57/321 (17%)
Query: 32 DVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRR- 86
DVEYRI EI+++A+K RHS+R LTTDDV +AL++ NVEP+YG+ G + F +
Sbjct: 2 DVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKV 61
Query: 87 -AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-------- 137
G + ++YLD+++V+F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 62 NTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRV 121
Query: 138 --------------------APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHIL 170
PV + A ++ T+ + K G E+K VKH+L
Sbjct: 122 SQPPFIRGAIVTALNDNSLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHVL 181
Query: 171 SRELQLYFDKI--TELAVSRSDSV---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 225
S+ELQ+YF+K+ T A S++D + + AL SL TDSGLH LVPYF F+A+++++
Sbjct: 182 SKELQIYFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQN 241
Query: 226 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE----- 280
L++ LL ++ ++++LL N I ++PY+H LMPS++T L+AK+LG D+ +
Sbjct: 242 LSDLQLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEF 301
Query: 281 ------LRDFTAKLVAAICKR 295
LRDF A L+ + K+
Sbjct: 302 LERTNALRDFAASLLDYVLKK 322
>gi|345568553|gb|EGX51446.1| hypothetical protein AOL_s00054g145 [Arthrobotrys oligospora ATCC
24927]
Length = 450
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 215/398 (54%), Gaps = 25/398 (6%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+V +T+ ++S+G+ + A ALA DVEYR+R+IM +I+ M+ S RTTL T D+
Sbjct: 3 SLVSIDTIRDNSESMGV-RLDDEVAQALASDVEYRLRQIMAASIEVMKESGRTTLYTKDL 61
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI--GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 119
+ A KL +++P G+ S LR+ A + LFY++D++V+F+ VI A LP+ P + +
Sbjct: 62 EMAAKLLDIDPPLGYQSNLGLRWGEATLGAGQPLFYIEDEEVDFEKVINASLPKVPREVT 121
Query: 120 IVCHWLAIEGVQPVIPEN-----------APVQAIAAPSNGTNNEQKDGLPVEIKLPVKH 168
+ HW AIEGVQP +P N P A A + G + +K KH
Sbjct: 122 MTAHWTAIEGVQPQVPMNPSPAEARMNELVPRGATTAHALGAAGNSDNA---TVKPAAKH 178
Query: 169 ILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN- 227
ILS ELQ++FDK+ + L AL +L T+ +H L+PYF +V + V+
Sbjct: 179 ILSVELQMFFDKVISSVIDYEKDDLRSAALSALRTEPAIHQLLPYFVSYVTERVTHDQKV 238
Query: 228 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN--HWELRDFT 285
+ L+ ++M + ++ N + ++ Y+ +L P ++TC V K LG D + LR
Sbjct: 239 DIKLMESMMDICDAMIDNESLFMDLYVEKLCPPILTCAVGKYLGPNTQDQIPTFPLRRKA 298
Query: 286 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLL 344
++ + YG +TL++RL ++ L LD K++ HYG++ GLA + G + +R+LL
Sbjct: 299 VSILRKLAINYGESSHTLRSRLGRSFLKRFLDNKQSYGSHYGSILGLANMGGTDSIRVLL 358
Query: 345 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQ 382
LPN+ + + E+ Q + ++ EA L++
Sbjct: 359 LPNVKLFEEFIRDEI----QGDGPRKAEALECLKVLVE 392
>gi|429963235|gb|ELA42779.1| hypothetical protein VICG_00094 [Vittaforma corneae ATCC 50505]
Length = 353
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 198/350 (56%), Gaps = 20/350 (5%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
KET+ AQS GIS+ DA L+ D+EYRI+E+ QEA K M S RT L DV+ AL
Sbjct: 5 KETLRAFAQSRGISSIDDDALRILSQDLEYRIKELCQEASKFMVVSHRTKLNIGDVNNAL 64
Query: 66 KLRNVEPVYGFASGGPLRFRRAIGYRDLFY-LDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
RNVEP++G+ S L FR G FY + D++++ ++ +E PLP+ PL + HW
Sbjct: 65 ISRNVEPLFGYDSNDTLVFR---GLPSGFYCVPDEEIDLEEYLEKPLPKIPLKPYVQSHW 121
Query: 125 LAIEGVQPVIPEN-APVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITE 183
LAIEGVQP I +N ++ AA + + Q+D +E+K KH+L++EL +YF+KI +
Sbjct: 122 LAIEGVQPPIQQNPILIEKPAAKQDSLSMYQED---LELKQQNKHLLTKELSMYFEKILQ 178
Query: 184 LAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLL 243
+ ++ A+ L ++G+ LVPYF + + + N LL ++++ +LL
Sbjct: 179 TMETDPET-----AISCLLNETGIQQLVPYFLHHFKLVIRKNFENDELLAVIVKMYGSLL 233
Query: 244 QNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTL 303
+N +I I+PYLH+++P +++C+V K + E R L+ I + Y +L
Sbjct: 234 KNKYIFIDPYLHEILPPLLSCVVGKSISE-------EARRLATDLIKYIFDVFSPKYKSL 286
Query: 304 QTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 353
+R+ LL LD + + YGA+ L+ L NV++ ++PN+ Y S
Sbjct: 287 PSRIVSFLLKGWLDDSKPESVQYGALFCLSILSDNVIKECVVPNIEKYTS 336
>gi|392566107|gb|EIW59283.1| transcription initiation factor TFIID complex subunit [Trametes
versicolor FP-101664 SS1]
Length = 487
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 210/387 (54%), Gaps = 44/387 (11%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
I ++V +A+S+ I+N A ALA DVEYRI ++++EA + MRH++RTTLTT DVD
Sbjct: 18 IYKTDSVRDVAESLNITNLPDVVASALASDVEYRISQVVEEAARFMRHAKRTTLTTADVD 77
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAIGYRDL------FYLDDKDVEFKDVIEAPLPRAPL 116
+AL++ N+EP+YG P FRRA+ + + ++++D+++EF + P
Sbjct: 78 QALRVLNIEPLYGHFPYNPPTFRRALPFPQMPSAGPVYFIEDEEIEFDRALREEKVTLPK 137
Query: 117 DTSIVCHWLAIEGVQPVIPENAPV-------------QAIAAPSNGT-------NNEQKD 156
+ HWLA+EGVQP+IPEN P Q ++ ++G+ ++++
Sbjct: 138 GVTWTAHWLAVEGVQPLIPENPPAVPRDIDPESAAAKQGLSTSASGSIFPPTPPSSDRPS 197
Query: 157 GLPVEIKLP-----VKHILSRELQLYFDKIT-ELAVSRSDSVLFKQALVSLATDSGLHPL 210
+ + P VK +LSRELQLY+ ++T L SD AL SL D+GL PL
Sbjct: 198 PIQASKQQPQQHIAVKQVLSRELQLYYTRLTSSLLPPSSDFAKRAAALASLRHDAGLSPL 257
Query: 211 VPYFTYFVADEVSRGLNNYS-------LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 263
+PY +V V L + S +L L+ V+ LL N + +EPYLHQL+PS+ +
Sbjct: 258 LPYLVRWVGQGVVDALRSGSQNETDGKVLDVLLDVIGALLDNQTLGVEPYLHQLLPSIFS 317
Query: 264 CLVAKRLGNRLADNH-WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
L L + L +H LR+ A++++ + Y Y L +R+ KTL+ L+ ++
Sbjct: 318 IL----LHSALPPSHAAHLRNTAAQILSHLLTHYSTTYPGLSSRIVKTLIVGLIGEGKSR 373
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNLG 349
+ GA++GL +G VR L+ + G
Sbjct: 374 STREGAIRGLMGIGKEAVRQGLVKHHG 400
>gi|196004760|ref|XP_002112247.1| hypothetical protein TRIADDRAFT_56085 [Trichoplax adhaerens]
gi|190586146|gb|EDV26214.1| hypothetical protein TRIADDRAFT_56085 [Trichoplax adhaerens]
Length = 1444
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 209/382 (54%), Gaps = 46/382 (12%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+ K++++ IA+S G + D + +A +V R+RE++Q+ +K MRHS+R LT +D+D
Sbjct: 9 ISKQSIKSIAESCGNAPIDDDCSQVIADEVNARLREVIQDGLKFMRHSKRDKLTRNDIDL 68
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEA-PLPRAPLDTSIV 121
ALK +++EPVYGF S + FR A G R +F+ +DK+ D+I + + PLD
Sbjct: 69 ALKFKSIEPVYGFTSRDFVPFRYASGGGRSIFFQEDKEFNLTDLIASQEASKVPLDNHTR 128
Query: 122 CHWLAIEGVQPVIPEN-----------------------APVQAIAAPSNGTNN---EQK 155
HWL+I+G QP+IPEN V A+ + S N E+K
Sbjct: 129 AHWLSIDGTQPLIPENPDPDTLHKFKRLSSDDSLDDFIPKKVPALFSLSFQDNKLIVEKK 188
Query: 156 DGLPVEIKLPVK-------------HILSRELQLYFDKITELAVSRSDSVLFKQALVSLA 202
G V+ K V+ H LS E QL+F +ITE VS S+ K+AL L
Sbjct: 189 AGKEVKSKEKVEDTSKASFLKPLSGHELSLEQQLFFREITEACVSNSEEKR-KKALECLQ 247
Query: 203 TDSGLHPLVPYFTYFVADEVSRGLNNY--SLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 260
D GL+ L+P F+ F+++ V ++ ++L L+R++ +LLQN + +E YLH+L+P+
Sbjct: 248 YDPGLYQLLPRFSRFISEGVRANIHETEDAVLIYLLRMMDSLLQNETLNLEKYLHELIPT 307
Query: 261 VVTCLVAKRLGNRLADNHWELRDFTAKLVAAIC--KRYGHVYNTLQTRLTKTLLNALLDP 318
++C+V K++ + +N ++ + A L+ IC K Y N +Q+R+T+T+ NAL +
Sbjct: 308 ALSCVVNKQIASEDPNNRLVIQHYAASLIYKICSNKIYNSPVNNVQSRITQTMANALQEE 367
Query: 319 KRALTQHYGAVQGLAALGPNVV 340
L +YGA+ + L N V
Sbjct: 368 SLPLHTYYGAIYLMIKLCSNDV 389
>gi|429964403|gb|ELA46401.1| hypothetical protein VCUG_02123 [Vavraia culicis 'floridensis']
Length = 360
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 198/351 (56%), Gaps = 13/351 (3%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
K++ AQ+ G+ +A LA DVEYR++E+ QEA K M S+RT L+ DDV+ AL
Sbjct: 5 KDSFLAYAQAKGLE-IEDEAISILAQDVEYRVKELCQEAAKFMLFSKRTKLSIDDVNNAL 63
Query: 66 KLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
RNV+P++G+ L F+ I +FY+ D++++ +D++ P P+ PL I HWL
Sbjct: 64 TTRNVDPIFGYDPKDNLVFKNDIVKSAIFYVPDEEIDLEDLLNQPPPKMPLKPKITSHWL 123
Query: 126 AIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELA 185
AIEGVQP IP+N + + PS + E+K KH++S+ELQLY++KI
Sbjct: 124 AIEGVQPQIPQNPII--MEKPSLKQDPLVTYTEESELKQTTKHVISKELQLYYEKILSFL 181
Query: 186 VSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQN 245
DS A+ L T+SG+ L+PY + +++ + + + +L + +LLQN
Sbjct: 182 ---EDSEKITLAIECLKTESGIQQLIPYLIQNINEKILKNMES-EVLSNFILFYHSLLQN 237
Query: 246 PHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQT 305
HI I+PYLHQ++PS++TC++ KR+ N ++R A+ + + +Y Y+TL
Sbjct: 238 EHIFIDPYLHQIIPSLLTCIIGKRIKN------MDIRKLAAETIKYVYDKYSITYDTLGP 291
Query: 306 RLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 356
R+ KTL LD ++ HY A+ L+ L NV+ ++ Y+ +++
Sbjct: 292 RIIKTLSKVWLDKDKSEDAHYAALFTLSILSTNVISSVIQKEKDRYVEMVK 342
>gi|388578780|gb|EIM19117.1| TAF-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 464
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 198/367 (53%), Gaps = 25/367 (6%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
I P E + +A+S+GI+ + A LA DVEYRI +++EA K M+HS+RT L D++
Sbjct: 13 IYPTEVIRDVAESVGITGLTDTVATGLAGDVEYRITLLIEEASKFMKHSKRTALLPCDIE 72
Query: 63 EALKLRNVEPVYG--FASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
ALK+ N+EP+Y A+ P R A +F L+DK+++F+ + PLPR S
Sbjct: 73 NALKVLNIEPLYSPHPATSIPTYRRVATPAGPVFALEDKEIDFEKALREPLPRLSKGPSY 132
Query: 121 VCHWLAIEGVQPVIPEN------------APVQAIAAPSNGTNNEQKDGLPVEIKLPVKH 168
HWLAIEGVQP+IP+N AP QA +N I PVKH
Sbjct: 133 TSHWLAIEGVQPLIPQNPAPTDNGPMHQLAPAQAALNNNNNNGAGVGGTASTTIHPPVKH 192
Query: 169 ILSRELQLYFDKITELAVSRSDSV--LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 226
+LS ELQLY+ ++T +S + +V + AL SL D GL LVPY F ++VS L
Sbjct: 193 LLSHELQLYYIRLTSALLSPATNVPEAREAALASLRGDPGLGGLVPYLVRFAGEKVSTNL 252
Query: 227 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 286
+N ++ A++ VV +L+ N + IEPYLHQ++P ++T L+ LR +A
Sbjct: 253 SNLDIIDAMVGVVHSLIDNQTLFIEPYLHQILPLLLTTLLTSSYPAPPDQKALWLRQKSA 312
Query: 287 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQ--------HYGAVQGLAALGPN 338
L+A + Y + Y TL R+ KTL AL + L + +G+V GL A+G N
Sbjct: 313 SLIARLLNDYSNSYPTLSGRVAKTLFKALSGDDQVLGESASTDIGTRFGSVLGLKAIGKN 372
Query: 339 V-VRLLL 344
VR L+
Sbjct: 373 TAVRALI 379
>gi|387594002|gb|EIJ89026.1| transcription initiation factor TFIID 70kda subunit [Nematocida
parisii ERTm3]
gi|387595796|gb|EIJ93419.1| transcription initiation factor TFIID 70kda subunit [Nematocida
parisii ERTm1]
Length = 381
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 201/362 (55%), Gaps = 22/362 (6%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
ET++ QS GI + + LA D+EYR++E+ QEA K M ++R+ L+ +DV+ AL
Sbjct: 6 ETLKAYTQSKGIPDIEDEDLKILAQDLEYRLKELAQEASKFMMAAKRSKLSIEDVNYALL 65
Query: 67 LRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLA 126
+ ++P+ G+ + L F+ G +L+Y+ D++++ + ++ +PLP+ P I HWLA
Sbjct: 66 SKEIDPLLGYNTSNSLVFKTIPG-SNLYYVPDEELDLESILNSPLPKIPHKPVISKHWLA 124
Query: 127 IEGVQPVIPEN-APVQAI-AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITEL 184
IEGVQP IP+N P++ + T K+ +EI+ +KH+LS+ELQLY++KI +
Sbjct: 125 IEGVQPQIPQNPLPMERMPEIKKEDTLAAMKED--IEIRNHMKHLLSKELQLYYEKIVQF 182
Query: 185 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQ 244
+ L + L +SG+ L+PYF +F +E+ + L N L ++ V +L+
Sbjct: 183 IKDKETVALASECL---KNESGIQQLIPYFVHFFNEEILKNLRNGDYLVDIISVYESLIM 239
Query: 245 NPHIQIEPYLHQLMPSVVTCLVAKRLGNR---------LADNHWELRDFTAKLVAAICKR 295
N I IEPY+HQ++PS++TC+V K +G + D+ + +A+ A+I +
Sbjct: 240 NKMIFIEPYMHQMLPSLLTCVVGKSIGIMHKHPSEEVLVNDSDEDTPGLSARRRASITIK 299
Query: 296 YGH-----VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGP 350
Y + Y TL R+ TLL D ++ HYGA+ L LG V+ +++
Sbjct: 300 YIYDTYSLSYTTLAPRVLNTLLKTWADSTKSPESHYGAIYCLCNLGEKVINGVVIQFKKE 359
Query: 351 YL 352
YL
Sbjct: 360 YL 361
>gi|444313621|ref|XP_004177468.1| hypothetical protein TBLA_0A01500 [Tetrapisispora blattae CBS 6284]
gi|387510507|emb|CCH57949.1| hypothetical protein TBLA_0A01500 [Tetrapisispora blattae CBS 6284]
Length = 589
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 225/490 (45%), Gaps = 150/490 (30%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A+S+GI N D ALA DVEYRI EI+++A K RH++R L+T+D+ ++
Sbjct: 13 PQDTVQDVAESLGIDNVPEDVLKALAMDVEYRILEIIEQAAKFKRHAKRNVLSTNDIAKS 72
Query: 65 LKLRNVEPVYGFASGGPLRF---RRAIGY----------RDLFYLD-DKDVEFKDVIEAP 110
L + NVEP+YG+ + L + +IG+ R ++++ D++ + + +++ P
Sbjct: 73 LTVLNVEPLYGYHNHQVLNGHSNQSSIGFTRCQVPGAPDRPVYFISGDEEADLEKLLQQP 132
Query: 111 LPRAPLDTSIVCHWLAIEGV----------------QPVIPENAPVQAI------AAPSN 148
LP P + HWLA+EGV QP A V A+ A N
Sbjct: 133 LPPIPRLPTFSAHWLAVEGVQPAIPQNPRLQEIRMAQPPAIRGAIVTALNDNSIHAEGDN 192
Query: 149 GTN---------------------NEQKDGLP----------------------VEIKLP 165
GT N +GL ++K
Sbjct: 193 GTGSGTGSTNNVLDGPDSSTIAGANNSINGLSNPNIQSSRPRVTSRVKPGSHSNTQLKPL 252
Query: 166 VKHILSRELQLYFDKITELAVSRSDSV----LFKQALVSLATDSGLHPLVPYFTYFVADE 221
V+H+LSRELQLYFDK+ E S S S L AL SL TDSGLH LVPYF F+A++
Sbjct: 253 VRHVLSRELQLYFDKVVEALTSSSSSPDSSHLRSAALTSLRTDSGLHQLVPYFIQFIAEQ 312
Query: 222 VSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG---------- 271
++ LN+ LL +++ ++++LL N I ++PY+H LMPS++T L+AK+LG
Sbjct: 313 ITHHLNDLDLLTSILEMIYSLLSNESIFLDPYIHSLMPSILTLLLAKKLGTPPNNLPKLT 372
Query: 272 --------------------------------NRLADNHWELRD---------------- 283
N+ DN E++D
Sbjct: 373 SNNNNNNNINNNINNNNNTDKSDVSSSSTKNENKDKDNDIEMKDTDTTTTNPQEDDLKGY 432
Query: 284 ---------FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 334
F A ++ + K++ +Y +L+ R+ +TLL LD +YG ++G+A
Sbjct: 433 LEKTNALRDFAASMLDYVLKKFPQIYKSLKPRVARTLLKTFLDLNHVFGTYYGCLRGIAV 492
Query: 335 LGPNVVRLLL 344
LG +R L
Sbjct: 493 LGNETIRFFL 502
>gi|336365599|gb|EGN93949.1| hypothetical protein SERLA73DRAFT_115423 [Serpula lacrymans var.
lacrymans S7.3]
Length = 461
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 206/386 (53%), Gaps = 54/386 (13%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+V+ +A+S+GISN S A +LA DVEYR+ ++++EA + MRH RRTT+TT D+D+AL+
Sbjct: 20 ESVKDVAESLGISNLSDTVASSLAADVEYRMHQVIEEASRFMRHGRRTTMTTSDIDQALR 79
Query: 67 LRNVEPVYGFASGGPLRFRRAIGYRDL------FYLDDKDVEFKDVIEAPLPRAPLDTSI 120
+ N+EP+YG S P FRRA+ + L ++++D++++F V+ P +
Sbjct: 80 VLNIEPLYGHNSFNPPAFRRALPFPQLPTVGPVYFVEDEEIDFDRVLREEKITVPKGVNW 139
Query: 121 VCHWLAIEGVQPVIPENAPV-------QAIAA-------------PSNGTNNEQKDGLPV 160
HWLA+EGVQP+IPEN P Q + PS+ + N+++
Sbjct: 140 TAHWLAVEGVQPLIPENPPAIPRDTDQQEVTKSPPISNTGFPPTPPSDRSTNKKQQQQQQ 199
Query: 161 EIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD 220
+ + VK +LSRELQLY+ ++T + SD AL SL D+GL L+PY +V +
Sbjct: 200 QQQQLVKQVLSRELQLYYTRLTTSLLPPSDFAKRTAALASLRHDAGLQALLPYLIRWVGE 259
Query: 221 EVSRGL-------NNYSLLFALMRVVWNLLQNPHIQIEPY------------------LH 255
V L N+ +L ++ VV +L+N + IEPY LH
Sbjct: 260 SVVNALKDSSDSDNDGKVLEVMLHVVSAILENSALFIEPYVSLQFFTIQYLLNHLVLQLH 319
Query: 256 QLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 315
Q++P +++ L+ L A LR ++ ++ + ++ Y +L R+ KTLL AL
Sbjct: 320 QILPPILSTLLHSFLPPSYAT---LLRTMASQTLSRLLTQHSTTYPSLSPRIMKTLLLAL 376
Query: 316 LDPKRALTQHYGAVQGLAALGPNVVR 341
+ P ++ GA++GL +G VR
Sbjct: 377 ISPDKSKNTREGAIRGLIGIGKEAVR 402
>gi|291231878|ref|XP_002735891.1| PREDICTED: TAF6-like RNA polymerase II-like [Saccoglossus
kowalevskii]
Length = 459
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 200/388 (51%), Gaps = 41/388 (10%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+ +E+V+ A+S+GI + S DAA LA DV YR+R+ Q + + M+HS+R +T++D +
Sbjct: 12 ISRESVKTYAESVGIGDLSEDAAAMLAEDVCYRLRQAAQASTQYMKHSKRRKMTSEDFNR 71
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI-VC 122
ALK +VEP+YG+ S P+ FR +L++++DK++ LP +D I VC
Sbjct: 72 ALKWMDVEPIYGYGSQDPMLFRTTKD-AELYFMEDKEIN--------LPEISMDGKIPVC 122
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
A + S G N + + LS +L Y + +T
Sbjct: 123 ---------------AGKTTVRGKSFGFKNH------------LSYTLSEDLVKYHENVT 155
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
+ A+ +D + K AL L T+S + L+PY FV+ V + ++ L LM +V +L
Sbjct: 156 K-AILGNDEDIMKVALDDLRTNSKVSSLLPYLIQFVSVGVKKVNHDLGQLTKLMHIVMSL 214
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+ NP + + PYL +L+ SV+ C++ N L D HW LRD+ A+L+A ICK Y
Sbjct: 215 IYNPFVYLGPYLKRLVSSVMYCIMEPLAASINPLND-HWTLRDYAARLLAHICKTYNSSV 273
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
N L+ +L LLD R L HYGA+ GL ALGP + +LLP L Y L +
Sbjct: 274 NHLKNQLYAAFQEVLLDHARPLCSHYGAIVGLMALGPKAIEDVLLPQLSGYWPTLMVVLE 333
Query: 361 LEKQKNEVKRHEAWRVYGALLQAAGQCI 388
N + + +VYGA+L AA + +
Sbjct: 334 DTSLSNIQVKTDGHKVYGAILLAANKML 361
>gi|300701912|ref|XP_002995057.1| hypothetical protein NCER_102196 [Nosema ceranae BRL01]
gi|239603739|gb|EEQ81386.1| hypothetical protein NCER_102196 [Nosema ceranae BRL01]
Length = 353
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/341 (33%), Positives = 189/341 (55%), Gaps = 18/341 (5%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
ET++ AQS+GI+N DA L+ D+EYRI+EI QE K M S+RT L+ +D++ L
Sbjct: 6 ETLKSYAQSVGITNIDDDALRILSQDLEYRIKEICQEGSKFMLASKRTKLSIEDINYGLI 65
Query: 67 LRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLA 126
RNV+P++G+ L F+ +FY+ D++++ ++ +E PLP+ PL+TSI HWLA
Sbjct: 66 SRNVDPLFGYDPQDNLVFKGLPS--GIFYVPDEELDIEEYLERPLPKIPLNTSIQSHWLA 123
Query: 127 IEGVQPVIPEN-APVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELA 185
IEGVQP +N +Q + Q++ E+K KHIL++EL +YF+KI +
Sbjct: 124 IEGVQPQTAQNPILIQKTEQKKDTLITYQEE---TELKSQNKHILTKELNMYFEKIIQTM 180
Query: 186 VSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQN 245
+ D A+ L +SG+ LVPYF + ++ + L L ++ + +LL N
Sbjct: 181 ETDEDI-----AIECLKNESGIQQLVPYFIHHFNQQIIKNLKVTEKLKTVIMMYNSLLNN 235
Query: 246 PHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQT 305
+I I+PYLHQ++PS++TC+V K + + +R ++ ++ + + Y TL
Sbjct: 236 QYIFIDPYLHQILPSLLTCVVGKSVDDS-------VRYLSSDVIKFVYDNFASKYKTLGP 288
Query: 306 RLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 346
R+ TL LD + GA++ L L V+ ++ P
Sbjct: 289 RIISTLSKTWLDKDKNENVQLGALRCLGILSQEVINNVIKP 329
>gi|378756081|gb|EHY66106.1| transcription initiation factor TFIID 70kda subunit [Nematocida sp.
1 ERTm2]
Length = 384
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/364 (33%), Positives = 196/364 (53%), Gaps = 24/364 (6%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
ET++ AQS GI + LA D+EYR++E+ QE+ K M S+R+ L+ +DV+ AL
Sbjct: 6 ETLKAYAQSKGIPEIEDEDLKILAQDLEYRLKELAQESSKFMIASKRSKLSIEDVNYALL 65
Query: 67 LRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLA 126
+ ++P+ G+ + L F+ G +L+Y+ D++++ + ++ +PLP+ P I HWLA
Sbjct: 66 SKEIDPLLGYNTSNSLMFKSIPG-SNLYYVPDEELDLESILTSPLPKIPQKPVISKHWLA 124
Query: 127 IEGVQPVIPEN-APVQAI-AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITEL 184
IEGVQP IP+N P++ + T K+ +EI+ +KH+LS+ELQLY++KI +
Sbjct: 125 IEGVQPQIPQNPLPMERMPEIKKEDTLAAMKED--IEIRNHMKHLLSKELQLYYEKIVQF 182
Query: 185 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQ 244
+ ++V A L +SG+ L+PYF +F +E+ + L N L ++ V +L+
Sbjct: 183 -IKEKETVSI--ASECLKNESGIQQLIPYFVHFFNEEILKNLRNGEYLVDIITVYESLIM 239
Query: 245 NPHIQIEPYLHQLMPSVVTCLVAK------RLGNRLADN----------HWELRDFTAKL 288
N I IEPY+HQ++PS++TC+V K R G R D R +
Sbjct: 240 NKMIFIEPYMHQMLPSLLTCVVGKSIGLDSRDGARAEDGAGSTANEDAPGLSARRRASAT 299
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
+ I Y Y TL R+ TLL D + HYGA+ L LG VV +++
Sbjct: 300 IKHIYDTYSLSYTTLAPRVLNTLLKTWADGAKTPESHYGAIYCLCNLGEKVVNGVVVQFK 359
Query: 349 GPYL 352
YL
Sbjct: 360 DEYL 363
>gi|402468109|gb|EJW03308.1| hypothetical protein EDEG_00217 [Edhazardia aedis USNM 41457]
Length = 356
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 194/354 (54%), Gaps = 19/354 (5%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
+ +ET++ A S GI+N A L+ D+EYR++E+ Q+A K M S RT L+ DDV+
Sbjct: 2 LFSRETLKAYASSKGITNIDDSAYQLLSQDLEYRVKELCQDAAKFMHASHRTKLSIDDVN 61
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
AL RN++P++G+ PL F+ + FY+ D + + +D + PLP+ P + S+
Sbjct: 62 YALIARNIDPLFGYDPSEPLNFKNI---NNFFYIPDDECDIEDYLNRPLPKLPPNPSVHA 118
Query: 123 HWLAIEGVQPVIPEN-APVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKI 181
HWLAIEGVQP IP+N P + + ++ ++ VEIK + ILS+ELQ+YFDKI
Sbjct: 119 HWLAIEGVQPQIPQNPLPAENKYKAQDVLHSYMEE---VEIKANPRLILSKELQMYFDKI 175
Query: 182 TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTY-FVADEVSRGLNNYSLLFALMRVVW 240
+ S AL L D G+ L+PYF F VS+ + + ++ +++
Sbjct: 176 NKYIEGSSKETTL--ALDCLENDCGIQQLIPYFIQSFSETLVSKNSTDKREI--IIAMLF 231
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVY 300
LL+N I I+PYLHQ++P+++T ++ + R+ ++ + + +R+ + Y
Sbjct: 232 ALLKNKFIFIDPYLHQIVPALLTGILGSNFSH-------STREISSTALVYLYERFSNTY 284
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSL 354
N+L R+ TL LD + Y AV+ L+ LG V+ ++ N Y+SL
Sbjct: 285 NSLAPRIINTLKKYWLDQSKCEDTQYHAVKTLSLLGKTVIDDIITKNANFYVSL 338
>gi|392591785|gb|EIW81112.1| TAF-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 480
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 203/383 (53%), Gaps = 47/383 (12%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V+ +A+S+GIS+ S A ALA DVEYRI+++++EA + MRH+RRTTLTT D+D AL+
Sbjct: 19 EAVQDVAESVGISSLSDSVASALASDVEYRIQQVIEEAARFMRHARRTTLTTADMDNALR 78
Query: 67 LRNVEPVYGFASGG-PLRFRRAI--------GYRDLFYLDDKDVEFKDVIEAPLPRAPLD 117
N+EP+YGF P FRRA G+ +++++D +V+F V+ P
Sbjct: 79 TLNIEPLYGFGGATVPPPFRRAAPFPHMQGQGHGPIYFIEDDEVDFDRVLREEKITVPRG 138
Query: 118 TSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDG---------------LPVEI 162
S HWLA+EGVQP+IPEN P A P + Q+DG +
Sbjct: 139 VSWAAHWLAVEGVQPLIPENPP----AVPRDSDQPPQQDGAANTAALAAQKKPQQQQQQQ 194
Query: 163 KLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEV 222
+ VK +LSRELQLY+ ++T + +D+ AL SL +D+GL L+PY ++ + V
Sbjct: 195 QQLVKQVLSRELQLYYARLTASLLPPTDNAKRTAALASLRSDAGLQALLPYLVKWIGEGV 254
Query: 223 SRGLNNYS-------LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA 275
L S L L+ V +L+N + +EPYLHQ++P +++ L+ L A
Sbjct: 255 VNVLREGSGSESDGRTLEVLLDAVSAILENNTLFVEPYLHQILPPLLSTLLHTSLPPTHA 314
Query: 276 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHY--------- 326
+ LR + +A + + Y +L R+TKTLL ALL + +
Sbjct: 315 SH---LRATASSTLARVLTTHSTTYPSLTPRITKTLLLALLGTSTNFSNGHQGASFGTRI 371
Query: 327 GAVQGLAALGPNVVRLLLLPNLG 349
GA++GL A+G VR L+ G
Sbjct: 372 GAIRGLGAIGKEAVRKGLVEGGG 394
>gi|260803104|ref|XP_002596431.1| hypothetical protein BRAFLDRAFT_194325 [Branchiostoma floridae]
gi|229281687|gb|EEN52443.1| hypothetical protein BRAFLDRAFT_194325 [Branchiostoma floridae]
Length = 444
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 190/378 (50%), Gaps = 40/378 (10%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+PKE+V A+SIGIS D A +A D YR+RE+MQ + + MRH++R LT +D +
Sbjct: 7 IPKESVRAHAESIGISEVPDDVAAMVAEDACYRLREVMQASCQFMRHAKRKRLTAEDFNR 66
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKD-VIEAPLPRAPLDTSIVC 122
AL+ NVEP+YG S P+ FR +L++ +D+++ + +E LPR P +T++
Sbjct: 67 ALRWSNVEPMYGHNSPDPMVFRPTKD-AELYFYEDREINLTEFAMETILPRNPGETTV-- 123
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
+ G + L LS EL Y+D++T
Sbjct: 124 -------------------------------KGKGFHFKELLSYSPALSEELVQYYDQVT 152
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
A+ + L K AL L T+S + L+PYF Y V EV ++ L L++ L
Sbjct: 153 R-AILGGNEQLIKTALADLRTNSRISALLPYFVYLVG-EVKSISHDLEALTRLLQTAQAL 210
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+QNPH+ + PYL QL+ SV+ C++ N L D HW LRD+ A+L+A IC+
Sbjct: 211 IQNPHLYLGPYLKQLVASVMYCILEPLAASINPLND-HWALRDYAARLLAQICRSGCMSV 269
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
LQ +L L L+DP R L HYGAV GL ALG V +L P LG Y L+ M
Sbjct: 270 EGLQKQLLLALQKVLVDPARPLCSHYGAVVGLTALGSKAVEDVLYPQLGTYWPFLQSWME 329
Query: 361 LEKQKNEVKRHEAWRVYG 378
N + +A RV G
Sbjct: 330 DRTISNAQAKADAHRVQG 347
>gi|299743831|ref|XP_001836008.2| transcription initiation factor TFIID complex 60 kDa subunit
[Coprinopsis cinerea okayama7#130]
gi|298405837|gb|EAU85784.2| transcription initiation factor TFIID complex 60 kDa subunit
[Coprinopsis cinerea okayama7#130]
Length = 485
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 205/389 (52%), Gaps = 50/389 (12%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQ--EAIKCMRHSRRTTLTTDDVDEA 64
+ ++ IA+S+ I+ S A +LA DVEYRI ++++ EA + MRH RRTT+TT D+D A
Sbjct: 20 DAIKDIAESLNIT-ISDSVASSLASDVEYRIHQVIEPKEAARFMRHGRRTTMTTSDIDNA 78
Query: 65 LKLRNVEPVYGFASGGPLRFRRAIGYRD------LFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ N+EP+YG FRRA+ Y +++++D++++F V+ P
Sbjct: 79 LRVLNIEPLYGHTPYNTATFRRALPYPQTQNAGPVYFVEDEEIDFDRVLREEKITLPKGV 138
Query: 119 SIVCHWLAIEGVQPVIPENAP-VQAIAAPSNGTNNEQKDGLPV-----EIKLPVKHIL-- 170
+ HWLA+EGVQP+IPEN P + AP G GLP E ++ +L
Sbjct: 139 TWTAHWLAVEGVQPLIPENPPAIPREVAPEAGAAAPDGVGLPTLAAKKEPQINGGGLLGN 198
Query: 171 ----------------------SRELQLYFDKITE-LAVSRSDSVLFKQALVSLATDSGL 207
SRELQLY+ ++T L SD AL SL +D+GL
Sbjct: 199 TPAAANSKLTQQQQQQLVKQVLSRELQLYYARLTTALLPPTSDFAKRTAALASLRSDAGL 258
Query: 208 HPLVPYFTYFVADEVSRGL-------NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 260
L+PY +VA+ V L N+ +L LM VV +L+N + +EPYLHQL+P
Sbjct: 259 QALLPYLVRWVAEGVVGALKDGTQTENDGKVLEVLMDVVSAILENKTLFVEPYLHQLLPP 318
Query: 261 VVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 320
+++ L+ L + + +LR A+ ++ + ++ Y +L R+ KTLL AL+ P +
Sbjct: 319 ILSTLLHSSLPH---SHSTQLRTSAAQTLSRLLTQHSTTYPSLSPRIMKTLLLALISPGK 375
Query: 321 ALTQHYGAVQGLAALGPNVVRLLLLPNLG 349
+ GAV+GL A+G VR L+ + G
Sbjct: 376 SKGTREGAVRGLVAVGKEAVRKGLVESGG 404
>gi|409079193|gb|EKM79555.1| hypothetical protein AGABI1DRAFT_74664, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 490
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 204/391 (52%), Gaps = 56/391 (14%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
I + ++ A+S+GI N S A LA DVEYRI ++++EA + MRH RRTTLT+ D+D
Sbjct: 16 IYKSDAIKDAAESLGI-NISDTVASVLASDVEYRIHQVVEEASRFMRHGRRTTLTSSDID 74
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAIGYRDL--------------FYLDDKDVEFKDVIE 108
AL+ N+EP+YG +R+A+ + + ++++D++++F+ V+
Sbjct: 75 LALRTLNIEPLYGHLPFSQPSYRKALPFPQMNQPGSSQPSAAGPVYFVEDEEIDFERVMR 134
Query: 109 APLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPS-------NGT----------- 150
P S HWLA+EGVQP+IPEN P P+ NGT
Sbjct: 135 EEKVMLPKGVSWTAHWLAVEGVQPLIPENPPAVPREEPTAAGETKVNGTLTSVPAATGAA 194
Query: 151 ----NNEQKDG-LP----VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ----A 197
QK G LP + VK +LSRELQLY+ ++T + S+++ + A
Sbjct: 195 GLLPGGGQKHGALPNASSAQSANLVKQVLSRELQLYYTRLTSSLLPPSNTLDYTTKKAAA 254
Query: 198 LVSLATDSGLHPLVPYFTYFVADEVSRGL-------NNYSLLFALMRVVWNLLQNPHIQI 250
L SL D+GL L+PY +V + V+ L + +L LM VV LL+N + +
Sbjct: 255 LASLRHDAGLQALLPYLVRWVGEGVAGVLKTGKQDDGDGKVLEVLMDVVSALLENKTLFV 314
Query: 251 EPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKT 310
EPYLHQL+P +++ L+ L L+ +LR ++ ++ + ++ Y +L R+ KT
Sbjct: 315 EPYLHQLLPPILSTLLHSSLPAALST---QLRVCASQTLSRVLTQHSTTYPSLSPRIMKT 371
Query: 311 LLNALLDPKRALTQHYGAVQGLAALGPNVVR 341
LL AL+ P ++ GAV+GL +G VR
Sbjct: 372 LLLALISPGKSRGTREGAVRGLMGVGKEAVR 402
>gi|403413034|emb|CCL99734.1| predicted protein [Fibroporia radiculosa]
Length = 565
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 211/385 (54%), Gaps = 41/385 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
I+ + V +++S+ I++ S A ALA DVEYRI ++++EA + MRH+RRTT+TT D+
Sbjct: 105 GILKPDIVRDVSESLNIASLSDLVASALASDVEYRIHQVVEEAARFMRHARRTTMTTSDI 164
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRD------LFYLDDKDVEFKDVIEAPLPRAP 115
D+AL++ N+EP+YG + P FRRA+ + +++++D++++F ++ P
Sbjct: 165 DQALRVLNIEPLYGHSPHNPPTFRRALPHSQAPSAGPVYFVEDEEIDFDRILREEKLTIP 224
Query: 116 LDTSIVCHWLAIEGVQPVIPENAPV--------QA--IAAPSNGT------------NNE 153
HWLA+EGVQP+IPEN P QA +A+P+ GT +
Sbjct: 225 KGPRWTAHWLAVEGVQPLIPENPPAIPKDTDLDQAGRLASPTRGTVFPLTPPSSDRPSPA 284
Query: 154 QKDGLPVEIKLPVKHILSRELQLYFDKITE--LAVSRSDSVLFKQALVSLATDSGLHPLV 211
Q + +L VK +LSRELQLY+ ++T L + SD AL SL D+GL L+
Sbjct: 285 QATRKQSQQQL-VKQVLSRELQLYYTRLTSALLPPTTSDYAKRTAALASLRNDAGLQALL 343
Query: 212 PYFTYFVADEVSRGLNNYS-------LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTC 264
PY +V + V L + +L L+ V+ LL N + +EPYLHQL+P +++
Sbjct: 344 PYLVRWVGEGVVGALKGAAQSEGDGRVLEVLLDVIGALLDNTTLFVEPYLHQLLPPILSI 403
Query: 265 LVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQ 324
L+ L A + LR +++++ + +Y Y +L R+ KTLL AL+ ++ +
Sbjct: 404 LLHSALPPTHAAH---LRTTASQILSHLLTQYSTTYPSLPPRIMKTLLLALISSGKSRST 460
Query: 325 HYGAVQGLAALGPNVVRLLLLPNLG 349
GA++GL +G VR L+ G
Sbjct: 461 REGAIRGLIGIGKEAVRKGLVEGGG 485
>gi|426196098|gb|EKV46027.1| hypothetical protein AGABI2DRAFT_152253 [Agaricus bisporus var.
bisporus H97]
Length = 507
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 203/391 (51%), Gaps = 56/391 (14%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
I + + +A+S+GI N S A LA DVEYRI ++++EA + MRH RRTTLT+ D+D
Sbjct: 16 IYKSDAIRDVAESLGI-NISDTVASVLASDVEYRIHQVVEEASRFMRHGRRTTLTSSDID 74
Query: 63 EALKLRNVEPVYGFASGGPLRFRRAIGYRDL--------------FYLDDKDVEFKDVIE 108
AL+ N+EP+YG +R+A+ + + ++++D++++F+ V+
Sbjct: 75 LALRTLNIEPLYGHLPFSQPSYRKALPFPQMNQPGSNQPSAAGPVYFVEDEEIDFERVMR 134
Query: 109 APLPRAPLDTSIVCHWLAIEGVQPVIPENAPV----QAIAAPSNGTNN------------ 152
P S HWLA+EGVQP+IPEN P + AA N
Sbjct: 135 EEKVMLPKGVSWTAHWLAVEGVQPLIPENPPAVPREEPTAAGETKVNGALTSVPAATGAA 194
Query: 153 ------EQKDG-LP----VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ----A 197
QK G LP + VK +LSRELQLY+ ++T + S+++ + A
Sbjct: 195 GLLPGGGQKHGALPNASSAQSANLVKQVLSRELQLYYTRLTSSLLPPSNTLDYTTKKAAA 254
Query: 198 LVSLATDSGLHPLVPYFTYFVADEVSRGL-------NNYSLLFALMRVVWNLLQNPHIQI 250
L SL D+GL L+PY +V + V+ L + +L LM VV LL+N + +
Sbjct: 255 LASLRHDAGLQALLPYLVRWVGEGVAGVLKTGKQDDGDGKVLEVLMDVVSALLENKTLFV 314
Query: 251 EPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKT 310
EPYLHQL+P +++ L+ L L+ +LR ++ ++ + ++ Y +L R+ KT
Sbjct: 315 EPYLHQLLPPILSTLLHSSLPAALST---QLRVCASQTLSHVLTQHSTTYPSLSPRIMKT 371
Query: 311 LLNALLDPKRALTQHYGAVQGLAALGPNVVR 341
LL AL+ P ++ GAV+GL +G VR
Sbjct: 372 LLLALISPGKSRGTREGAVRGLMGVGKEAVR 402
>gi|449549185|gb|EMD40151.1| hypothetical protein CERSUDRAFT_112363 [Ceriporiopsis subvermispora
B]
Length = 476
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 203/388 (52%), Gaps = 48/388 (12%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
I +++ +A+S+ I+N S + A ALA DVEYRI ++++EA K MRH+RRTT+TT D+
Sbjct: 16 GIYKADSIRDVAESLNITNLSDNVASALASDVEYRIHQVVEEAAKFMRHARRTTMTTADI 75
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDL------FYLDDKDVEFKDVIEAPLPRAP 115
D AL++ N+EP+YG P FRRA+ + +L ++++D++++F VI P
Sbjct: 76 DNALRVLNIEPLYGHTPHNPPTFRRALPFPNLQSAGSVYFVEDEEIDFDRVIREEKLTLP 135
Query: 116 LDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE-------------- 161
S HWLA+EGVQP+IPEN P A P + + + K G P
Sbjct: 136 KGVSWTAHWLAVEGVQPLIPENPP----AIPRD-PDQDLKPGSPARPGTIFPPTPPSDGP 190
Query: 162 ----------IKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQALVSLATDSGLH 208
+ VK +LSRELQLY+ ++T + S D AL SL D+GL
Sbjct: 191 HQAAKKAAQQQQQLVKQVLSRELQLYYTRLTSALLPTSGTADPAKRTAALASLRHDAGLQ 250
Query: 209 PLVPYFTYFVADEVSRGLN-------NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 261
L+PY +V + V L + +L + V+ LL NP + +EPYLHQL+P +
Sbjct: 251 ALLPYIVRWVGEGVVAALRGGVQTEADARVLEVFLDVIGALLDNPTLFVEPYLHQLLPPL 310
Query: 262 VTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 321
++ L+ L + + LR A+ +A + Y Y +L R+ KTLL ALL R+
Sbjct: 311 LSVLLHSALPPAQSTH---LRTAAAQTLAHLLTTYATTYPSLPPRVMKTLLLALLAQGRS 367
Query: 322 LTQHYGAVQGLAALGPNVVRLLLLPNLG 349
GAV+GL +G VR LL G
Sbjct: 368 AGTREGAVRGLVGVGREAVRKGLLEGGG 395
>gi|207345395|gb|EDZ72230.1| YGL112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 432
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 170/307 (55%), Gaps = 51/307 (16%)
Query: 89 GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN----------- 137
G + ++YLD+++V+F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 19 GGQSVYYLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQP 78
Query: 138 -----------------APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHILSRE 173
PV + A ++ T+ + K G E+K VKH+LS+E
Sbjct: 79 PFIRGAIVTALNDNSLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHVLSKE 138
Query: 174 LQLYFDKI--TELAVSRSDSV---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN 228
LQ+YF+K+ T A S++D + + AL SL TDSGLH LVPYF F+A+++++ L++
Sbjct: 139 LQIYFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSD 198
Query: 229 YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-------- 280
LL ++ ++++LL N I ++PY+H LMPS++T L+AK+LG D+ +
Sbjct: 199 LQLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLER 258
Query: 281 ---LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP 337
LRDF A L+ + K++ Y +L+ R+T+TLL LD R +YG ++G++ L
Sbjct: 259 TNALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSVLEG 318
Query: 338 NVVRLLL 344
+R L
Sbjct: 319 ESIRFFL 325
>gi|390363871|ref|XP_783285.2| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like
[Strongylocentrotus purpuratus]
Length = 647
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 211/390 (54%), Gaps = 20/390 (5%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+I K++++ +A+S G S + A LA DV YR+RE +Q + + M+HS+R +T+DDV
Sbjct: 22 AIFSKDSIKTMAESAGHERLSEETAAILAEDVCYRLREAVQASAQFMKHSKRKRMTSDDV 81
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSI 120
++AL+ +VEP++G+ S P FR+ I +L++++D+++ ++ ++ +P + +TS+
Sbjct: 82 NKALRWSDVEPIHGYGSNEPAVFRQ-IKDTNLYFVEDRELSLSEIAMDTKIPNSAGNTSL 140
Query: 121 VCHWLAIEGV-QPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFD 179
+WLA+EGV + V+ + P QA A Q G+ +++ LS + Y+
Sbjct: 141 KANWLALEGVHKTVVQSSDPGQAAAEGIQKILGVQGQGMTHSMEM-----LSSDQVTYYQ 195
Query: 180 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL----LFAL 235
I + A+ +D K L+ L T+S + L+PY F VS G+ SL L L
Sbjct: 196 HIIK-AILGTDEEAKKVVLIDLQTNSKIAGLLPYLVNF----VSAGVKVVSLELYQLTGL 250
Query: 236 MRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK-RLGNRLADNHWELRDFTAKLVAAICK 294
+ ++ LL+N I + PY+ QL+ +V+ C++ + ++HW LRD+ A+L+ I +
Sbjct: 251 LYIIDALLRNQFIYLGPYMIQLVSTVMYCILEPLAVSINPLNDHWGLRDYAARLLLPILR 310
Query: 295 RYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSL 354
+ ++ + DP R L +YGAV GL ALGP V +L P L Y
Sbjct: 311 CSKESKSKFYHQMLTAFQEVMKDPARPLCTYYGAVMGLIALGPQAVEDVLCPRLSSYWPT 370
Query: 355 LEPEMLLEKQKNEVKRHEAWRVYGALLQAA 384
L + +LE + + +V+GALL AA
Sbjct: 371 L--QQVLEDTSITRVKEDGHKVHGALLTAA 398
>gi|269859744|ref|XP_002649596.1| transcription initiation factor TFIID subunit [Enterocytozoon
bieneusi H348]
gi|220066959|gb|EED44428.1| transcription initiation factor TFIID subunit [Enterocytozoon
bieneusi H348]
Length = 354
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 190/344 (55%), Gaps = 18/344 (5%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
K+T++ A S GI N ++ L+ D+EYRI+E+ QEA K M S R L T DV+ AL
Sbjct: 5 KDTLKSFAASKGIENIEEESYRILSQDLEYRIKEVCQEAAKFMHASHRKKLNTSDVNNAL 64
Query: 66 KLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWL 125
RNVEP++G+ S L F+ + +++ D++++ ++ ++ PLP+ PL I HWL
Sbjct: 65 ISRNVEPLFGYESQEILIFKGLPS--NSYFVPDEEIDLEEYLDKPLPKIPLRPYIQSHWL 122
Query: 126 AIEGVQPVIPENAPVQAIAAPSNG-TNNEQKDGLPVEIKLPVKHILSRELQLYFDKITEL 184
AIEGVQP I +N + P N +N Q++ + IK +KH L++EL +YF+KI L
Sbjct: 123 AIEGVQPPIQQNPIILERQQPKNDPISNFQEEMI---IKKQIKHRLTKELNMYFEKI--L 177
Query: 185 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQ 244
V +D + ++ L ++G+ LVPYF + ++ + N + + ++LL+
Sbjct: 178 QVMETDPSI---SMECLENETGIQQLVPYFIHQFNTDIRNNIGNTLKAKTICLMYFSLLK 234
Query: 245 NPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQ 304
N + I+PYLH+++PS+++C+V K + + ++RD ++ + + Y TL
Sbjct: 235 NKFLFIDPYLHEILPSLLSCVVGKSVSH-------DVRDVAIDVIKYVYDNFSCNYLTLA 287
Query: 305 TRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
R+ TL +A L+ ++ A++ L+ L +V L L
Sbjct: 288 PRIVNTLKSAWLNEEKIPESRLAAIKCLSVLSSKIVENFLTSEL 331
>gi|297739130|emb|CBI28781.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 182 bits (461), Expect = 5e-43, Method: Composition-based stats.
Identities = 82/102 (80%), Positives = 95/102 (93%)
Query: 295 RYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSL 354
R+GHVYN QT+LT+TLL+A LDPKR++TQHYGA+QGLAALGPN+VRLL++PNL PYL L
Sbjct: 20 RFGHVYNNQQTQLTETLLHAFLDPKRSMTQHYGAIQGLAALGPNMVRLLVVPNLEPYLRL 79
Query: 355 LEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFP 396
LEPEMLLEKQKNE+KRHEAWRVYGALL+A GQ IYDRLK+FP
Sbjct: 80 LEPEMLLEKQKNEIKRHEAWRVYGALLRAIGQSIYDRLKMFP 121
>gi|170595735|ref|XP_001902499.1| Transcription initiation factor TFIID subunit 6 [Brugia malayi]
gi|158589796|gb|EDP28652.1| Transcription initiation factor TFIID subunit 6, putative [Brugia
malayi]
Length = 284
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 163/285 (57%), Gaps = 33/285 (11%)
Query: 40 IMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFA--SGGPLRFRRAIGYRDLFYLD 97
+ ++A K H RR +T +D+D A L P++GF G P RF ++G RDLF D
Sbjct: 2 VTEQAKKFAVHGRRKRVTAEDIDSAFALGGYPPLFGFTVKEGLPFRFAGSMG-RDLFVTD 60
Query: 98 DKDVEFKDVIEAPLPRAPLDTSIVC---------HWLAIEGVQPVIPEN-APV-QAIAAP 146
D+D+E V+ AP + PL+T+I C HWL I+GVQP +PEN APV Q AA
Sbjct: 61 DRDIEITPVVNAPAAKLPLETNIKCKCKNNFVSAHWLVIDGVQPAVPENPAPVVQKEAAV 120
Query: 147 SNGTNNEQKD-GLP--------------VEIKLPVKHILSRELQLYFDKITELAVSRSDS 191
T D GL V+IK H LS E Q++F +ITE A+ SD
Sbjct: 121 VVATEKAAVDTGLSILSKACRGLRQTEQVQIKTTSTHALSVEQQVFFKEITE-AIMGSDD 179
Query: 192 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 249
+AL SL TD+GL L+P F+ + + V + +N ++L LMR++ +L NP +
Sbjct: 180 TRRTEALYSLQTDAGLQQLLPRFSVVIVEGVRCNIVQHNLAILIYLMRMIQSLANNPALS 239
Query: 250 IEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAIC 293
+E LH+L+PS+++C+++++L R DNHW LR+F+++L+A IC
Sbjct: 240 LERCLHELLPSILSCILSRQLCARPETDNHWALREFSSRLLANIC 284
>gi|170092004|ref|XP_001877224.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648717|gb|EDR12960.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 475
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 211/412 (51%), Gaps = 57/412 (13%)
Query: 26 ALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFR 85
A ALA DVEYRI ++++EA + MRH RRTT++T D+D+A ++ N+EP+YG P FR
Sbjct: 36 ASALASDVEYRIHQVIEEAARFMRHGRRTTMSTSDIDQAFRVLNIEPLYGHTPHNPHTFR 95
Query: 86 RAIGYRD------LFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 139
RA+ + +++++D++++F V++ P S HWLA+EGVQP+IPEN P
Sbjct: 96 RALPFPQVPAAGPVYFVEDEEIDFDRVLKEEKIALPKGVSWTAHWLAVEGVQPLIPENPP 155
Query: 140 -VQAIAAPSNGTNNE---QKDG---LPVEIKLPVKH--------------ILSRELQLYF 178
+ ++GT E + +G LP P + +LSRELQLY+
Sbjct: 156 AIPRETVDADGTKGESLTKLNGTGLLPTPTTAPQQGAKAAPGQQQQLVKQVLSRELQLYY 215
Query: 179 DKITELAVSRS-DSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS------- 230
++T + S D AL SL D+GL L+PY +V + V L S
Sbjct: 216 ARLTSSLLPPSLDLTKRTAALASLRHDAGLQALLPYLVRWVGEGVVGTLKEGSQSETDGR 275
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-LRDFTAKLV 289
+L L+ V L++N + IEPYLHQ+ P ++ L L + L +H LR ++ +
Sbjct: 276 VLEVLLDVTSALIENNTLFIEPYLHQIFPPTLSIL----LHSSLPLSHATLLRTSASQTL 331
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 349
+ + ++ Y +L R+ KTLL AL+ P ++ GA++GL +G VR L+ G
Sbjct: 332 SRLLTQHSTTYPSLSPRIMKTLLLALISPGKSKGTREGAIRGLLGVGKEAVRKGLVEGGG 391
Query: 350 PYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSL 401
+ + E Q N + GAL+ + + D L++ PLS +
Sbjct: 392 AKV------VGAECQGNNSES-------GALVGS----VMDALRVLQPLSDM 426
>gi|389740215|gb|EIM81406.1| TAF-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 502
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 200/388 (51%), Gaps = 45/388 (11%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E+V+ +A+S+GI+N S A LA DVEYR+ ++++EA + MRH+RRT+LTT+D+D+AL+
Sbjct: 21 ESVKDVAESLGITNLSESVASNLASDVEYRLHQVIEEAARFMRHARRTSLTTNDIDQALR 80
Query: 67 LRNVEPVYGFASGGPLRFRRAIGYRDL------FYLDDKDVEFKDVI-EAPLPRAPLDTS 119
+ N+EP+YG P FRRA+ + L ++L+D++++F V+ E L
Sbjct: 81 VLNIEPLYGHTPHNPPSFRRALPFPTLPAAGSVYFLEDEEIDFDRVLKEERLSTGNNGVR 140
Query: 120 IVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGL-----------PVEIKLPV-- 166
HWLA+EGVQP+IPEN P P GT +GL P +L
Sbjct: 141 WTAHWLAVEGVQPLIPENPPAIPKDEPGAGTQKNGVNGLVAGMGQSTPTSPGARRLAASQ 200
Query: 167 ----------KHILSRELQLYFDK----ITELAVSRSDSVLFKQALVSLATDSGLHPLVP 212
K +LSRELQLY + + + + +D AL SL D+GL PL+P
Sbjct: 201 HSQQQQQQLVKQVLSRELQLYHARLTSSLLSPSSTTADQTKRTAALASLRHDAGLQPLLP 260
Query: 213 YFTYFVADEV----------SRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVV 262
Y +VA+ V G +L ++V+ LL N + +EPYLHQL+P ++
Sbjct: 261 YLVRWVAEGVIAILKEGPDSGEGDETGRVLEVYLQVIAALLDNQTLFVEPYLHQLLPPIL 320
Query: 263 TCLVAKRLGNRLADNHWE-LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 321
+ L+ L N +R ++ ++ + ++ Y L R+ KTLL L+ +A
Sbjct: 321 SSLLYSSLPLPTPLNKPNPIRTHASQTLSHLLTQHSLSYPDLSPRIMKTLLVGLVGVNKA 380
Query: 322 LTQHYGAVQGLAALGPNVVRLLLLPNLG 349
GAV GL A+G VR LL G
Sbjct: 381 KGTREGAVMGLIAVGKEAVRQGLLGKNG 408
>gi|361130087|gb|EHL01941.1| putative Transcription initiation factor TFIID subunit 6 [Glarea
lozoyensis 74030]
Length = 338
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 148/273 (54%), Gaps = 38/273 (13%)
Query: 119 SIVCHWLAIEGVQPVIPEN-----------APVQAIAAPS----NGTNNEQKDGLPVEIK 163
S HWLA+EGVQP IP+N P A PS G +N V K
Sbjct: 2 SFTAHWLAVEGVQPSIPQNPTTGEARAGELVPKGPGANPSLAALAGNDN-------VAFK 54
Query: 164 LPVKHILSRELQLYFDKITELAVSRSDS-----VLFKQALVSLATDSGLHPLVPYFTYFV 218
VKH+LS+EL L+FDKI A+ D L A S+ D GLH LVPYF F+
Sbjct: 55 PLVKHVLSKELILFFDKI-RAAILDDDPDPEVVSLRASAFASVRADPGLHQLVPYFVQFI 113
Query: 219 ADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN- 277
+++V+ LNN +L +M + ++ NP + I PY+ L+P V+TCLV + LG A+N
Sbjct: 114 SEKVTHSLNNTFVLRQMMELATAMINNPSLFINPYVTALVPPVLTCLVGRNLGPEPANNL 173
Query: 278 --HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 335
++LRD A L+ I K+Y L+ RLT+T L LDP R L +HYGA+ GL+ +
Sbjct: 174 QEQYQLRDHAASLIGQISKKYAESSMQLRPRLTRTCLKYFLDPSRTLGEHYGAINGLSTI 233
Query: 336 -GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNE 367
GP V+R +LLPN+ P+ E +L K NE
Sbjct: 234 GGPEVIRSILLPNVKPF------EYVLTKAINE 260
>gi|327290084|ref|XP_003229754.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like [Anolis
carolinensis]
Length = 617
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 202/398 (50%), Gaps = 36/398 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESAGV-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ NVE V G+ S PL FR + +L++ +D+++ ++ A +P+ +T++
Sbjct: 71 ALRWSNVEAVCGYGSQDPLPFR-TLKEGELYFQEDREINLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A++A L+ +L Y+ +T
Sbjct: 130 HVSYLDGKGNLEPQGSVPSAVSA------------------------LTDDLLKYYQHVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVW 240
AV D L K AL L T+ + L+PYF Y V+ VS L S L + R
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNPKIAALLPYFVYVVSGVKSVSHDLEQLSRLLHVAR--- 221
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGH 298
+L+QNP++ + Y+ L+ SV+ C++ N L D HW LRD+ A L+ I + +G
Sbjct: 222 SLIQNPYLYLGSYVKSLIASVMYCVLEPLAASINPLND-HWTLRDYAAMLLGHIFRTHGD 280
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y S L+
Sbjct: 281 LVGGLFPQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWSNLQAV 340
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFP 396
+ N + + +VYGA+L A + + + + P
Sbjct: 341 LDDYSVSNAQVKADGHKVYGAILVAVERLLKMKAQSLP 378
>gi|291190468|ref|NP_001167272.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Salmo salar]
gi|223648978|gb|ACN11247.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Salmo salar]
Length = 637
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 201/385 (52%), Gaps = 36/385 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
VP+E+V+++A+S G+ S D A LA DV YR+RE Q + + MRH++R LT +D +
Sbjct: 9 VPRESVKLMAESAGV-ELSDDVAALLAEDVCYRLREATQSSSQFMRHAKRRKLTVEDFNR 67
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ NVE + G+ + L FR I +LF++DD+D+ ++ A +P+ +T +
Sbjct: 68 ALRWSNVEAIAGYGAQDALPFR-PIKEGELFFVDDRDINLVELALATNIPKGCAETMVRV 126
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
+ ++G N E + +P ++ LS +L Y+ +IT
Sbjct: 127 NVSYLDG-------------------KGNLEPQGTVPSAVQ-----TLSEDLLKYYQQIT 162
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVW 240
A+ D L K AL+ L ++S + L+PYF Y ++ VS L L L+ +V
Sbjct: 163 R-AILGEDPHLMKVALLDLQSNSKIAALLPYFVYVISGVKSVSHDLEQ---LNRLLHMVK 218
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGH 298
+L+QNP++ + Y+ L+ SV+ C++ N L D HW LRD+ A L++ I +G
Sbjct: 219 SLVQNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLRDYAALLLSHIFWTHGD 277
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ + L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+
Sbjct: 278 LVSGLYHQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAV 337
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQA 383
+ N + + +VYGA+L A
Sbjct: 338 LDDYSVSNAQVKADGHKVYGAILVA 362
>gi|281200383|gb|EFA74603.1| TATA-binding protein-associated-factor [Polysphondylium pallidum
PN500]
Length = 382
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 112/150 (74%), Gaps = 1/150 (0%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS++PK+T++VIA+ +GISN + + A LA DVEYRIREI QE+IK M+H++R LTTDD
Sbjct: 1 MSVLPKDTIKVIAECVGISNLNDEIATQLASDVEYRIREIAQESIKFMKHAKREYLTTDD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 119
++ ALKLRN+E +YG+ + P +F + + + ++++ DK++ F+D+I PLP+ P + S
Sbjct: 61 INNALKLRNIEVLYGYGASEPYKFSKVLSPSQAIYFVHDKELLFQDIIAQPLPKCPREPS 120
Query: 120 IVCHWLAIEGVQPVIPENAPVQAIAAPSNG 149
+ HWLA+EGVQP+IP+N P Q++ P N
Sbjct: 121 LAAHWLALEGVQPLIPQNPPPQSMLDPFNN 150
>gi|126333621|ref|XP_001362631.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like isoform
1 [Monodelphis domestica]
Length = 615
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 199/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESAGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ NVE V G+ S L R A DL++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSNVEAVCGYGSQETLPLRPAR-EGDLYFPEDREVNLVELALATNIPKGCPETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G V P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNVEPQGSVPSAVSS------------------------LTDDLLKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
L+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 LRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
N L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 NGLSQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWANLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|346975529|gb|EGY18981.1| transcription initiation factor TFIID subunit 6 [Verticillium
dahliae VdLs.17]
Length = 394
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 199/387 (51%), Gaps = 62/387 (16%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V+ +A+S+GIS+ + DA L D EYRI +++ EA++ MR +RRTTLT D+ +AL+
Sbjct: 16 ENVKDVAESVGISSLNEDALRVLTQDAEYRIGQVVIEALRFMRAARRTTLTVGDIAQALR 75
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLR+ A +G + L+YL+D++V+F+ +I APLP+ P D S HW
Sbjct: 76 VLDVEPLYGYESTRPLRYGEASLGPGQPLYYLEDEEVDFEKLINAPLPKVPRDMSFTAHW 135
Query: 125 LAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITEL 184
LAIEGVQP IP+N P+ + Q +HI+S+EL L
Sbjct: 136 LAIEGVQPSIPQN--------PTTAESRSQD-----------QHIISKEL-------GSL 169
Query: 185 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQ 244
RS ++ + S + PL P + ++V+ L++ L + + L++
Sbjct: 170 LWRRSKTLSSTTTQTTRWAGSAM-PLSPPSSR---NQVTHRLDDVFTLRRVKELTEALIE 225
Query: 245 NPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQ 304
N ++ ++P R+F+A L+ I RY + L+
Sbjct: 226 NTNLLLDP------------------------TSTSSREFSASLLGKIALRYAASNHLLR 261
Query: 305 TRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNLGPYLSLLEPEMLLEK 363
+L +T L +DP + HYGA+ GLAA GP VR+L+L L Y + +L++
Sbjct: 262 PKLVRTCLKFFMDPDKLPAAHYGAITGLAAAGGPEAVRVLVLKYLRAY-----SDEVLQR 316
Query: 364 QKNEVKRHEAWRVYGALLQAAGQCIYD 390
K++ + + + G +++A + D
Sbjct: 317 LKDKGEGLDFELLVGGIVRAIATLVAD 343
>gi|156405270|ref|XP_001640655.1| predicted protein [Nematostella vectensis]
gi|156227790|gb|EDO48592.1| predicted protein [Nematostella vectensis]
Length = 375
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 194/394 (49%), Gaps = 37/394 (9%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
S++ E V + A+ IG++ + A +LA DV YR+R ++Q A + M+H +R +TT+D
Sbjct: 11 FSVLSAENVRLYAEVIGVTKLEDNLARSLAEDVTYRVRHLLQTAQQFMKHGKRRRMTTED 70
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRR-AIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDT 118
++ A++L NVEPVYG+ SG + FR + D+F++D+K++ +++ + +P P
Sbjct: 71 LNRAMQLTNVEPVYGYGSGEDMPFRSTSTKEGDVFFVDEKEIGIRELALSTAVPTDPGKV 130
Query: 119 SIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYF 178
S+ + V + + AI+ GL Y+
Sbjct: 131 SVRGKYEMYFTVHATVLGCSSKAAISTA----------GLE-----------------YY 163
Query: 179 DKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRV 238
++IT+ + SD V + A L ++ + + PYF F+A V ++ L L+ +
Sbjct: 164 EQITKAVLGESD-VCRRMAFSDLQSNPKISCIFPYFVSFIASGVKSCSHDLKQLSRLLGM 222
Query: 239 VWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL--ADNHWELRDFTAKLVAAICKRY 296
V L N + ++PY+ QL+ +V+ CL+ + L L ++HW LR A ++A + ++
Sbjct: 223 VSALTDNSSLFLDPYVIQLVTAVMYCLL-ETLTVSLNPVNDHWRLRRDAACILAFLSRKC 281
Query: 297 GHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 356
+ N L +L TL L D R H+GAV GL LG + LLP+L Y L+
Sbjct: 282 SNPVNYLHQQLLMTLREVLTDESRPYCSHFGAVVGLMELGSEALEQFLLPHLSTYWHQLQ 341
Query: 357 PEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYD 390
+ + N V R EA VY ALL CI D
Sbjct: 342 QVLEDDSSSNGVLRGEALHVYAALL----VCIKD 371
>gi|302689849|ref|XP_003034604.1| hypothetical protein SCHCODRAFT_52257 [Schizophyllum commune H4-8]
gi|300108299|gb|EFI99701.1| hypothetical protein SCHCODRAFT_52257, partial [Schizophyllum
commune H4-8]
Length = 455
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 201/374 (53%), Gaps = 39/374 (10%)
Query: 12 IAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVE 71
+A S+ I N S A ALA DVEYR+ ++++EA + MRH RRTTLT D+++A K+ N+E
Sbjct: 2 VADSLNIPNLSDIVATALANDVEYRLHQVVEEAARFMRHGRRTTLTVSDMEQAFKVLNIE 61
Query: 72 PVYGFASGGPLRFRRAIGYRD-----LFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLA 126
P+YG + P FRRA+ Y + +++++D++++F V+ P + HWLA
Sbjct: 62 PLYGHSQHNPPVFRRALPYPNSNAGPVYFVEDEEIDFDRVLREEKLALPKGVTYHAHWLA 121
Query: 127 IEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKH-----------------I 169
+EGVQP IPEN PV N + +G+ V VK +
Sbjct: 122 VEGVQPQIPENPPVIVKEGDVPAPLNAKTNGVVVTPAGGVKKLQQTPIQGQQQQQLVKQV 181
Query: 170 LSRELQLYFDKITELAVSRSDSV---LFKQ--ALVSLATDSGLHPLVPYFTYFVADEV-- 222
LSRELQLY+ ++T + S S L K+ A+ SL+ D+GL L+PY +V++ V
Sbjct: 182 LSRELQLYYTRLTTSLSTSSYSAPDELKKRAAAIGSLSQDAGLQALLPYLIRWVSESVVA 241
Query: 223 -----SRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN 277
+ + L ++ V+ L++N + IEPYLHQL+P +++ L+ +
Sbjct: 242 VLKEGGQSEQDGHTLETMLDVIGALMRNTTLFIEPYLHQLLPPLLSLLLHS---TLPPSH 298
Query: 278 HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA--LTQHYGAVQGLAAL 335
LR +A+ +A + +++ Y +L R+ KTLL AL+ P+++ + GAV+GL +
Sbjct: 299 AVVLRTKSAQTLAELLRKHSTTYPSLAPRIMKTLLLALISPEKSTHIGTREGAVRGLVGV 358
Query: 336 GPNVVRLLLLPNLG 349
G VR L+ G
Sbjct: 359 GKEAVRKGLVEGGG 372
>gi|384485548|gb|EIE77728.1| hypothetical protein RO3G_02432 [Rhizopus delemar RA 99-880]
Length = 220
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 136/219 (62%), Gaps = 18/219 (8%)
Query: 48 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IGYRDLFYLDDKDVEFKDV 106
MRHS+RT LT +D++ AL+++NVEP+YG+ G +FR+ + D+++ DD++++F V
Sbjct: 1 MRHSKRTKLTVEDINAALRVKNVEPLYGYMQGDSPKFRKTTVNSTDVYFDDDEEIDFDTV 60
Query: 107 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAIA----------APSNGTNNEQK 155
+ PLP+ PLD + HWLAIEGVQP IP+N P A A A SNG +Q
Sbjct: 61 LNKPLPKIPLDVTFTAHWLAIEGVQPAIPQNPTPNDAKAELLSKRNKTHASSNGITTDQ- 119
Query: 156 DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFT 215
V +K VKH+LS+ELQ+YF++ITE A+ + L QA SL D GLH L+PYF
Sbjct: 120 ----VNVKPLVKHVLSKELQMYFERITE-AILNDNERLQSQAFESLRLDPGLHQLLPYFV 174
Query: 216 YFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYL 254
+ +V++ N +L A++ + LL N H+ IEPY+
Sbjct: 175 QHIHKKVAQNHKNLDILEAMLSMAHALLNNKHLFIEPYV 213
>gi|440898153|gb|ELR49708.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Bos grunniens mutus]
Length = 619
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 200/385 (51%), Gaps = 36/385 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGG--PLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSI 120
AL+ +VE V G+ S PLR R DL++ +D++V ++ + +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEVLPLRPARE---GDLYFPEDREVNLVELALATNIPKGCAETAL 127
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
H ++G + P+ + A+++ L+ +L Y+ +
Sbjct: 128 RVHVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQ 163
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
+T AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V
Sbjct: 164 VTR-AVLGDDPQLMKIALHDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVAR 221
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGH 298
+L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I YG
Sbjct: 222 SLVRNPHLCLVPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTYGD 280
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ N L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+
Sbjct: 281 LVNGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAV 340
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQA 383
+ N + + +VYGA+L A
Sbjct: 341 LDDYSVSNAQVKADGHKVYGAILVA 365
>gi|390602989|gb|EIN12381.1| hypothetical protein PUNSTDRAFT_97062 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 440
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 190/358 (53%), Gaps = 54/358 (15%)
Query: 29 LAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA- 87
LA DVEYR+ ++++EA + MRH RRTTLTT D+D AL++ N+EP+YG + PL FRRA
Sbjct: 2 LASDVEYRLHQVIEEAARFMRHGRRTTLTTADIDNALRVLNIEPLYGHSPHAPLAFRRAP 61
Query: 88 -------------------IGYRDLFYLDDKDVEFKDV--------IEAPLPRAPLDTSI 120
+++++D++++F ++ I+ P P S
Sbjct: 62 PVYLPSQPGAANHHHAPSQAQSTSVYFVEDEEIDFDNLGRGLREEKIQLPKP-----VSW 116
Query: 121 VCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQKDGLPVEIKLP---VKHILSREL 174
HWLA+EGVQP IPEN P I AA N T+ +Q GLP + VK +LSREL
Sbjct: 117 TAHWLAVEGVQPAIPENPPPVPIPRDAATENATDTKQP-GLPSAVGPQPQLVKQVLSREL 175
Query: 175 QLYFDKITELAV----SRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
QLY+ ++T + +++ AL SL D+GL L+PY +V + V L + +
Sbjct: 176 QLYYTRLTSALLPPLQGEAEAAKRAAALASLRHDAGLQALLPYLVRWVGEGVVAALKDGA 235
Query: 231 -------LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRD 283
+L L+ V+ LL N + +EPYLHQL+P +++ L+ L LA + LR
Sbjct: 236 QNVLDGRVLEVLLDVIGALLDNQTLFVEPYLHQLLPPILSILLHSSLPPALAKH---LRT 292
Query: 284 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 341
A ++ + ++ Y +L R+ KTLL AL+ P + GA++GL +G VR
Sbjct: 293 SAASTLSHLLTQHSTTYPSLSPRIMKTLLLALVSPDKGAGTREGAIRGLVGVGKEAVR 350
>gi|164655815|ref|XP_001729036.1| hypothetical protein MGL_3824 [Malassezia globosa CBS 7966]
gi|159102925|gb|EDP41822.1| hypothetical protein MGL_3824 [Malassezia globosa CBS 7966]
Length = 350
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 164/312 (52%), Gaps = 60/312 (19%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ PK++V+ +A+S+GI+N + A ALA D+EYRIR+I+Q A KCM+H++RT +TT D+
Sbjct: 33 SVYPKDSVKDVAESLGITNLRDNIATALATDIEYRIRDIVQSASKCMKHAKRTRMTTSDI 92
Query: 62 DEALKLRNVEPVYGF---ASGGPLR---FRR--AIGYRDLFYLDDKDVEFKDVIEAPLPR 113
D AL+ +N+EP+YGF +GG + FR L+ L+D+++ F+ ++E PR
Sbjct: 93 DHALRQKNIEPLYGFYPPYTGGKKQGPWFRTVPTTSGAPLYVLEDEEINFEHILEHG-PR 151
Query: 114 APLDTSIV--CHWLAIEGVQPVIPEN-APVQAIAAPSNGTNNEQKDGLPVE-----IKLP 165
+ + HWLAIEGVQP IPEN P+ A ++ T+ E +K
Sbjct: 152 VGVGRGVGWHAHWLAIEGVQPPIPENPVPLTRKMAGTDDTSLADAGEAAAELGNTAVKPL 211
Query: 166 VKHILSRELQLYFDKITELAVS--------------------------RSDSVLFKQALV 199
VKH+LSRELQLY++++T +S S +++ AL
Sbjct: 212 VKHVLSRELQLYYERLTSSILSPPTDAETETGTALPQEGMPLSNYSDISSGNLVRDAALS 271
Query: 200 SLATDSGLHPLVPYFTYFVADEVSRGL-----------------NNYSLLFALMRVVWNL 242
SL D+G+H LVPY +V V+ L + LL ++ + L
Sbjct: 272 SLRGDAGIHQLVPYLIQWVGSNVTHSLRLPPTAQDPEKKLEEQKHTIQLLHTMLSTLHAL 331
Query: 243 LQNPHIQIEPYL 254
L N I IEPY+
Sbjct: 332 LVNTSIFIEPYV 343
>gi|354504564|ref|XP_003514344.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Cricetulus
griseus]
Length = 673
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 199/385 (51%), Gaps = 36/385 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 19 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 77
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 78 ALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 136
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 137 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 172
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVW 240
AV D L K AL L T+S + L+PYF Y V+ VS L L L++V
Sbjct: 173 R-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQ---LHRLLQVAR 228
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGH 298
+L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G
Sbjct: 229 SLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGD 287
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ N L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+
Sbjct: 288 LVNGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAV 347
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQA 383
+ N + + +VYGA+L A
Sbjct: 348 LDDYSVSNAQVKADGHKVYGAILVA 372
>gi|426252422|ref|XP_004019911.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Ovis aries]
Length = 562
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 199/385 (51%), Gaps = 36/385 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 19 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 77
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 78 ALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVELALATNIPKGCAETALRV 136
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 137 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 172
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVW 240
AV D L K AL L T+S + L+PYF Y V+ VS L L L++V
Sbjct: 173 R-AVLGDDPQLMKIALHDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQ---LHRLLQVAR 228
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGH 298
+L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I YG
Sbjct: 229 SLVRNPHLCLVPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTYGD 287
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ N L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+
Sbjct: 288 LVNGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAV 347
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQA 383
+ N + + +VYGA+L A
Sbjct: 348 LDDYSVSNAQVKADGHKVYGAILVA 372
>gi|330688406|ref|NP_001193462.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Bos taurus]
gi|296471685|tpg|DAA13800.1| TPA: TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Bos taurus]
Length = 626
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 200/385 (51%), Gaps = 36/385 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 19 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 77
Query: 64 ALKLRNVEPVYGFASGG--PLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSI 120
AL+ +VE V G+ S PLR R +L++ +D++V ++ A +P+ +T++
Sbjct: 78 ALRWSSVEAVCGYGSQEVLPLRPARE---GELYFPEDREVNLVELALATNIPKGCAETAL 134
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
H ++G + P+ + A+++ L+ +L Y+ +
Sbjct: 135 RVHVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQ 170
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
+T AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V
Sbjct: 171 VTR-AVLGDDPQLMKIALHDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVAR 228
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGH 298
+L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I YG
Sbjct: 229 SLVRNPHLCLVPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTYGD 287
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ N L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+
Sbjct: 288 LVNGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAV 347
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQA 383
+ N + + +VYGA+L A
Sbjct: 348 LDDYSVSNAQVKADGHKVYGAILVA 372
>gi|315013539|ref|NP_001186651.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Danio rerio]
Length = 641
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 201/385 (52%), Gaps = 36/385 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
VP+E+V+++A+S G+ S + A LA DV YR+RE Q + + MRH++R L+ +D +
Sbjct: 12 VPRESVKLMAESAGV-ELSEELAGLLAEDVCYRLREATQNSSQFMRHAKRRKLSVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ N E V G+ + L FR + +LFY++D+++ ++ A +P+ +T +
Sbjct: 71 ALRWSNTETVCGYGAQDALPFR-PLKEGELFYVEDREINLVELALATNIPKGCAETMVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G N E + +P ++ LS +L Y+ +IT
Sbjct: 130 HVSYLDG-------------------KGNLEPQGTVPTAVQ-----SLSEDLLKYYQQIT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVW 240
A+ D L K AL+ L ++S + L+PYF Y ++ VS L+ L L+ +V
Sbjct: 166 R-AILGEDPHLMKVALLDLQSNSKIAALLPYFVYVISGVKSVSHDLDQ---LNRLLHMVK 221
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGH 298
+L+QNP++ + Y+ L+ SV+ C++ N L D HW LRD+ A L++ I +G
Sbjct: 222 SLVQNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLRDYAALLLSHIFWTHGD 280
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ + L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+
Sbjct: 281 LVSGLYHQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAV 340
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQA 383
+ N + + +VYGA+L A
Sbjct: 341 LDDYSVSNAQVKADGHKVYGAILVA 365
>gi|335281666|ref|XP_003353862.1| PREDICTED: LOW QUALITY PROTEIN: TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa
subunit 6L-like [Sus scrofa]
Length = 626
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 199/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 19 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 77
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V D+ A +P+ +T++
Sbjct: 78 ALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVDLALATNIPKGCAETAVRV 136
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 137 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 172
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 173 R-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 230
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 231 VRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 289
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 290 SGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 349
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 350 DYSVSNAQVKADGHKVYGAILVA 372
>gi|295317363|ref|NP_666204.2| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L isoform 1 [Mus musculus]
Length = 623
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 199/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 19 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 77
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A DL++ +D++V ++ A +P+ +T++
Sbjct: 78 ALRWSSVEAVCGYGSQEALPLRPAR-EGDLYFPEDREVSLVELALATNIPKGCAETAVRV 136
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 137 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 172
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 173 R-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 230
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 231 IRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 289
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 290 SGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLD 349
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 350 DYSVSNAQVKADGHKVYGAILVA 372
>gi|46577508|sp|Q8R2K4.1|TAF6L_MOUSE RecName: Full=TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L; AltName:
Full=PCAF-associated factor 65-alpha; Short=PAF65-alpha
gi|20307033|gb|AAH28647.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor [Mus musculus]
gi|148701422|gb|EDL33369.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, isoform CRA_a [Mus musculus]
Length = 616
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 199/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A DL++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPLRPAR-EGDLYFPEDREVSLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 IRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|348541933|ref|XP_003458441.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like
[Oreochromis niloticus]
Length = 639
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 198/385 (51%), Gaps = 36/385 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
V +E+V ++A+ G+ D A LA DV YR+RE Q + + MRH++R LT +D +
Sbjct: 12 VSRESVRLMAEGAGV-ELGDDVAALLAEDVCYRLREATQSSSQFMRHAKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ NVE + G+ + L FR ++ +LF+++D+DV ++ A +P+ +T +
Sbjct: 71 ALRWSNVEAICGYGAQDALPFR-SVKEGELFFVEDRDVNLVELALATNIPKGCAETMVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
+ ++G N E + +P ++ LS +L Y+ +IT
Sbjct: 130 NVSYLDG-------------------KGNLEPQGTVPTAVQ-----SLSDDLLKYYQQIT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVW 240
A+ D L K AL+ L ++S + L+PYF Y ++ VS L L LM +V
Sbjct: 166 R-AILGEDPHLMKVALLDLQSNSKIAALLPYFVYVISGVKSVSHDLEQ---LNRLMHMVK 221
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGH 298
+L+QNP++ + Y+ L+ SV+ C++ N L D HW LRD+ A L++ I +G
Sbjct: 222 SLVQNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLRDYAALLLSHIFWTHGD 280
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ + L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+
Sbjct: 281 LVSGLYHQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAV 340
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQA 383
+ N + + +VYGA+L A
Sbjct: 341 LDDYSVSNAQVKADGHKVYGAILVA 365
>gi|355723132|gb|AES07793.1| TAF6 RNA polymerase II, TATA box binding protein -associated
factor, 80kDa [Mustela putorius furo]
Length = 484
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 128/196 (65%), Gaps = 4/196 (2%)
Query: 156 DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFT 215
+G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+
Sbjct: 8 EGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAK-RAEALQSIATDPGLYQMLPRFS 66
Query: 216 YFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 273
F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R
Sbjct: 67 TFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLR 126
Query: 274 L-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGL 332
DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GL
Sbjct: 127 PDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGL 186
Query: 333 AALGPNVVRLLLLPNL 348
A LG +V++ L+LP L
Sbjct: 187 AELGHDVIKTLILPRL 202
>gi|410974436|ref|XP_003993653.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Felis catus]
Length = 528
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 199/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 VRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|395852462|ref|XP_003798757.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Otolemur
garnettii]
Length = 620
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 200/383 (52%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEVLPLRSAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 VRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L ++ +L L+DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQQILLSLQKVLVDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|427794891|gb|JAA62897.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 618
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 206/408 (50%), Gaps = 39/408 (9%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S P++++ + A+S GI+ S A L DV YR+RE+ Q + MRH++R LT +D+
Sbjct: 26 SQFPRDSISLFAESNGITGVSDQALSLLTEDVNYRLRELAQNCGQFMRHAKRRKLTCNDM 85
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLP-RAPLDTSI 120
+ AL+ + +P YG + PL FR I D+F DD V+ D +++PL P + S+
Sbjct: 86 ERALRWSDSQPSYGCSGDEPLPFRH-IREADVFCTDDSIVDLADELDSPLQLDLPPEPSV 144
Query: 121 VCHWLAIEGV---------QPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILS 171
WL +EGV P + E +AI N T+ +
Sbjct: 145 HGRWLVVEGVALEPDLDKPMPAVQETDGSKAIHTDVNATHMQ------------------ 186
Query: 172 RELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 231
Y+++IT+ A+ SD L AL LA++ L PL+PY +FV+ V + ++ +
Sbjct: 187 -----YYEEITK-ALLGSDKQLVDVALEDLASNPCLSPLLPYLVHFVSLGVRKLSHDLAS 240
Query: 232 LFALMRVVWNLLQNPHIQIE--PYLHQLMPSVVTCLVAKRLGN-RLADNHWELRDFTAKL 288
L L+ + L QN + ++ PY ++ +++ CL+ A++HW LRD A+L
Sbjct: 241 LDRLLHAIGALAQNTSLNLDTLPYPTMVVQALLFCLLEPLAAAINPANDHWALRDNAAQL 300
Query: 289 VAAICKRYGHVYNTLQTRLTKTLLNALLDPK-RALTQHYGAVQGLAALGPNVVRLLLLPN 347
+AA+ + + L+ ++ L + DP R L YGAV GL ALG ++ +L P+
Sbjct: 301 LAALLRFWADRVAGLENQVLDALGECVRDPSLRPLCAQYGAVSGLTALGVEALQQVLGPH 360
Query: 348 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIF 395
LG Y LE + + N + +A RV+GALL AA + + ++ ++
Sbjct: 361 LGAYWRHLELVLADCRPANAQAQADATRVHGALLLAAEKLVKEQRRVM 408
>gi|301779984|ref|XP_002925422.1| PREDICTED: LOW QUALITY PROTEIN: TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa
subunit 6L-like [Ailuropoda melanoleuca]
Length = 529
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 198/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L+ I +G +
Sbjct: 224 VRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLXXIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|291409520|ref|XP_002721088.1| PREDICTED: TAF6-like RNA polymerase II [Oryctolagus cuniculus]
Length = 712
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 199/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 103 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 161
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 162 ALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 220
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 221 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 256
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 257 R-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 314
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 315 VRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 373
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 374 SGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 433
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 434 DYSVSNAQVKADGHKVYGAILVA 456
>gi|134026098|gb|AAI35738.1| Unknown (protein for MGC:121670) [Xenopus (Silurana) tropicalis]
Length = 237
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 131/224 (58%), Gaps = 34/224 (15%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P E+++VIA+S+G+S S + LA +V +RI+E+ Q+A+K M +R LT +D+
Sbjct: 10 TLLPSESMKVIAESVGVSQMSEETCQMLAQEVSFRIKEVTQDALKFMHVGKRQKLTPNDI 69
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALKL+NVEP+YGF + L FR A G R+L + ++K+V+ D+I PLPR PLD SI
Sbjct: 70 DAALKLKNVEPIYGFHAKEFLPFRYASGGGRELHFYEEKEVDLSDIISTPLPRVPLDVSI 129
Query: 121 VCHWLAIEGVQPVIPEN--------------APVQAI---------------AAPSNGTN 151
HWL+IEGVQP IPEN P++A+ A + G
Sbjct: 130 KAHWLSIEGVQPAIPENPPPVTKEQQKSEATEPLKAVKPGQEEGGLKGKGQGAGAAEGKG 189
Query: 152 NEQK----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 191
E+K +G P+++K H LS E QLY+ +ITE V ++
Sbjct: 190 KEKKTPILEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEA 233
>gi|73983375|ref|XP_533259.2| PREDICTED: TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa isoform 1 [Canis lupus
familiaris]
Length = 625
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 200/385 (51%), Gaps = 36/385 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 19 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 77
Query: 64 ALKLRNVEPVYGFASGG--PLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSI 120
AL+ +VE V G+ S PLR R +L++ +D++V ++ A +P+ +T++
Sbjct: 78 ALRWSSVEAVCGYGSQEVLPLRPARE---GELYFPEDREVNLVELALATNIPKGCAETAV 134
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
H ++G + P+ + A+++ L+ +L Y+ +
Sbjct: 135 RVHVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQ 170
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
+T AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V
Sbjct: 171 VTR-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVAR 228
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGH 298
+L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G
Sbjct: 229 SLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGD 287
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ + L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+
Sbjct: 288 LVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAV 347
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQA 383
+ N + + +VYGA+L A
Sbjct: 348 LDDYSVSNAQVKADGHKVYGAILVA 372
>gi|351699183|gb|EHB02102.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L, partial [Heterocephalus
glaber]
Length = 365
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 198/383 (51%), Gaps = 36/383 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ + LP+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPLRPA-REGELYFPEDREVNLVELALATNLPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA--DEVSRGLNNYSLLFALMRVVW 240
AV D L K AL L T+S + L+PYF Y V+ VS L L L++V
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQ---LHRLLQVAR 221
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGH 298
+L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G
Sbjct: 222 SLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGD 280
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ + L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+
Sbjct: 281 LVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAV 340
Query: 359 MLLEKQKNEVKRHEAWRVYGALL 381
+ N + + +VYGA+L
Sbjct: 341 LDDYSVSNAQVKADGHKVYGAIL 363
>gi|157820939|ref|NP_001101045.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Rattus norvegicus]
gi|149062298|gb|EDM12721.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor (predicted) [Rattus norvegicus]
gi|197246841|gb|AAI68911.1| Taf6l protein [Rattus norvegicus]
Length = 623
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 199/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 19 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 77
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 78 ALRWSSVEAVCGYGSQEVLPLRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 136
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 137 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 172
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 173 R-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 230
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 231 IRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 289
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 290 SGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLD 349
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 350 DYSVSNAQVKADGHKVYGAILVA 372
>gi|348564202|ref|XP_003467894.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like [Cavia
porcellus]
Length = 745
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 200/385 (51%), Gaps = 36/385 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 159 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 217
Query: 64 ALKLRNVEPVYGFAS--GGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSI 120
AL+ +VE V G+ S PLR R +L++ +D++V ++ A +P+ +T++
Sbjct: 218 ALRWSSVEAVCGYGSQEALPLRPTRE---GELYFPEDREVNLVELALATNIPKGCAETAV 274
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
H ++G + P+ + A+++ L+ +L Y+ +
Sbjct: 275 RVHVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQ 310
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 240
+T AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V
Sbjct: 311 VTR-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVAR 368
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGH 298
+L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G
Sbjct: 369 SLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGD 427
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ + L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+
Sbjct: 428 LVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAV 487
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQA 383
+ N + + +VYGA+L A
Sbjct: 488 LDDYSVSNAQVKADGHKVYGAILVA 512
>gi|256082306|ref|XP_002577399.1| transcription initiation factor tfiid [Schistosoma mansoni]
gi|350645501|emb|CCD59853.1| transcription initiation factor tfiid, putative [Schistosoma
mansoni]
Length = 536
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 191/416 (45%), Gaps = 74/416 (17%)
Query: 4 VPKETVEV-----IAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTT 58
VPK+ + V A+ G+SN S AA L + R ++ E ++ M SRR
Sbjct: 49 VPKQEINVDVATLCAEMCGVSNLSQSAANLLQKHLNQIARLLIHEVLRVMEQSRRGVPQA 108
Query: 59 DDVDEALKLRNVEP-------VYGFASGG-------PLRF--RRAI---GYRDLFYLDDK 99
D+D A L +E + F+ G P+R R A G + F DK
Sbjct: 109 SDIDLASVLIGLEASFYNNYFIMKFSPFGTTTANFLPIRTGGRTASSGPGGKVFFIRPDK 168
Query: 100 DVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----VQAIAAPSNGTNNEQ 154
+++ K ++ D S+V HWL++ G QP P+N P A+ S G+NN+Q
Sbjct: 169 EIDVKALLLREPAGVIYDVSLVAHWLSVNGKQPTSPQNPPPDFLAKMALLNNSFGSNNKQ 228
Query: 155 K---------DGLPVEIKLPVK-------------------------------HILSREL 174
D + ++ K H +S+E+
Sbjct: 229 NKRPISHQKNDDINSSVEKHSKIGIHNSNRDKLDLLSGSHPRKVLAVSVERRPHEISQEV 288
Query: 175 QLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL--L 232
+YF ++TE V ++ +AL + D GL P++P+ F+ + V + N++L L
Sbjct: 289 MIYFRELTEACVG-ANETRRHEALDNATLDPGLQPILPHLMTFITEGVRINVTNHNLAIL 347
Query: 233 FALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAA 291
LMR+V L+ NPHI +EPYLH L+P+V+TC++ ++L + + DNHW LRDF AK +
Sbjct: 348 IYLMRLVKALIDNPHISLEPYLHLLVPTVITCVLNRQLCAKPITDNHWALRDFAAKQLVT 407
Query: 292 ICKRYGHVYNTLQTRLTKTLLNALLDPK-RALTQHYGAVQGLAALGPNVVRLLLLP 346
+C R+ N L R+T+ L AL ++ YG + LA G +R+ + P
Sbjct: 408 LCNRHNTSSNELYGRVTRELSRALCSSAIHSMNTLYGIIVALAEFGAQCLRMTVFP 463
>gi|297739129|emb|CBI28780.3| unnamed protein product [Vitis vinifera]
Length = 149
Score = 159 bits (401), Expect = 4e-36, Method: Composition-based stats.
Identities = 72/88 (81%), Positives = 83/88 (94%)
Query: 294 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 353
+R+GHVYN QT+LTKTLL+A+LDPKRA+TQHYGA+QGLAALGPN+VRLL++PNL PYL
Sbjct: 52 RRFGHVYNNQQTQLTKTLLHAVLDPKRAMTQHYGAIQGLAALGPNMVRLLVVPNLEPYLR 111
Query: 354 LLEPEMLLEKQKNEVKRHEAWRVYGALL 381
LLE EMLLEKQKNE+KRHEAWRVYGALL
Sbjct: 112 LLESEMLLEKQKNEIKRHEAWRVYGALL 139
>gi|431910358|gb|ELK13431.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Pteropus alecto]
Length = 621
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 198/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L + +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPLRPAR-EGELCFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 VRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|432921343|ref|XP_004080111.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like [Oryzias
latipes]
Length = 637
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 221/466 (47%), Gaps = 45/466 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
V +E+V ++A+S G+ + A LA DV YR+RE Q + M+H++R LT +D +
Sbjct: 12 VSRESVALMAESAGV-ELGEEMAAVLAEDVCYRLREAAQSCSQFMKHAKRKKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ NVE V G+ + L FR +LF++DD+++ ++ A +P+ +T +
Sbjct: 71 ALRWSNVEAVCGYGAQDALPFRSG-KEGELFFVDDREINLIELALATNIPKGCAETMVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK-HILSRELQLYFDKI 181
+ ++G K G+ ++ +P LS +L Y+ +I
Sbjct: 130 NVAYLDG-------------------------KGGVELQGAVPTAVQSLSDDLLKYYQQI 164
Query: 182 TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVV 239
T A+ D L K AL+ L ++S + L+PYF Y ++ VS L + L ++R
Sbjct: 165 TR-AILGDDPHLMKVALLDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVR-- 221
Query: 240 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYG 297
+L+QNP++ + Y+ L+ SV+ C++ N L D HW LRD+ A L++ I +G
Sbjct: 222 -SLVQNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLRDYAALLLSNIFWTHG 279
Query: 298 HVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEP 357
+ + L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+
Sbjct: 280 DLVSGLYHQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVEKVLFPHLPAYWANLQA 339
Query: 358 EMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVATLS 417
+ N + + +VYGA+L A +RL L SL W N +L+
Sbjct: 340 VLDDYSVSNAQVKADGHKVYGAILVAV-----ERLLKMKAL-SLSHPGEWCFNAQTGSLA 393
Query: 418 NK-RKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATP 462
+S L P A G + S P EE A + P
Sbjct: 394 AAVGYSSPGLSPPPESLSEAAFGIASHLQAGSGGCPWEEWAPVSLP 439
>gi|397517251|ref|XP_003828830.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Pan
paniscus]
Length = 573
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 197/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYHQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 FRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L + +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|355566389|gb|EHH22768.1| PCAF-associated factor 65-alpha [Macaca mulatta]
Length = 622
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 197/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYHQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 FRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L + +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|380787061|gb|AFE65406.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Macaca mulatta]
gi|383413521|gb|AFH29974.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Macaca mulatta]
gi|384943890|gb|AFI35550.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Macaca mulatta]
Length = 622
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 197/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYHQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 FRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L + +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|158260021|dbj|BAF82188.1| unnamed protein product [Homo sapiens]
Length = 622
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 197/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYHQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDLGQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 FRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L + +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|332836744|ref|XP_001142675.2| PREDICTED: TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
gi|410217404|gb|JAA05921.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
gi|410259762|gb|JAA17847.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
gi|410293910|gb|JAA25555.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
gi|410352299|gb|JAA42753.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
Length = 622
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 197/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYHQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 FRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L + +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|443917577|gb|ELU38272.1| transcription initiation factor TFIID complex 60 kDa subunit
[Rhizoctonia solani AG-1 IA]
Length = 610
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 188/397 (47%), Gaps = 76/397 (19%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
++V+ +A S+GI+N A ALA DVEYR+ ++++EA + RH+RR+T++ D+D
Sbjct: 86 DSVKDVADSLGIANLPDSVAAALASDVEYRLHQVVEEAARFTRHARRSTMSPADID---- 141
Query: 67 LRNVEPVYGFASGGPLRFRRAIGYRDL----FYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
+P+YG +S FRRA+ L ++L+D++++F ++ + P
Sbjct: 142 ----QPLYGHSSAHTPTFRRAVPQHTLSQSVYFLEDEEIDFDKALKEEVITVPPPVRYTA 197
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNN-----EQKDGLPVEIKLP------------ 165
HWLAIEG+QP++PEN A + T +K G+
Sbjct: 198 HWLAIEGIQPLVPENPTTSAETKTATTTQGPPSPRARKQGIAAPTTTNSTTAASTSAATL 257
Query: 166 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 225
VKH+L RELQLY D+++ +S ++ AL SL D+GL L+PY ++ + V R
Sbjct: 258 VKHVLPRELQLYHDRLSSALISGNERKR-TAALSSLRADAGLQALLPYLIRWIGETVVRV 316
Query: 226 LN-----------------------NYSLLFALMRVVWNLLQNPHIQIEPY--------- 253
L + + L ++ + LL N + +EPY
Sbjct: 317 LKGEGATHTGDDGSDDDAMFGSDELDRAKLDIMLDALKALLDNKTLFVEPYVSVGKIASP 376
Query: 254 -------LHQLMPSVVTCLVAKRLGNRLADNHW-------ELRDFTAKLVAAICKRYGHV 299
LHQ+MP +++ L+ LG+ + + + +R A L++ + +G
Sbjct: 377 LSNTFLQLHQIMPPILSILLTASLGSSSSFSSFDSNPPPRHVRMHAASLLSHVLNLHGPT 436
Query: 300 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALG 336
Y +L R+ KTL+ P R GA++GLAALG
Sbjct: 437 YPSLGARVLKTLIIGATAPGRQRGTREGALRGLAALG 473
>gi|5453844|ref|NP_006464.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Homo sapiens]
gi|46577572|sp|Q9Y6J9.1|TAF6L_HUMAN RecName: Full=TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L; AltName:
Full=PCAF-associated factor 65-alpha; Short=PAF65-alpha
gi|3335559|gb|AAC39905.1| PCAF associated factor 65 alpha [Homo sapiens]
gi|119594499|gb|EAW74093.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa, isoform CRA_a [Homo
sapiens]
gi|119594500|gb|EAW74094.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa, isoform CRA_a [Homo
sapiens]
gi|189067267|dbj|BAG36977.1| unnamed protein product [Homo sapiens]
Length = 622
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 197/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYHQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 FRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L + +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|426368911|ref|XP_004051444.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Gorilla
gorilla gorilla]
Length = 694
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 197/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ + +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYHQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 FRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L + +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|403255124|ref|XP_003920297.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L isoform 2
[Saimiri boliviensis boliviensis]
Length = 634
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 196/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 24 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 82
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 83 ALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 141
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 142 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 177
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 178 -WAVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDLGQLHRLLQVARSL 235
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G
Sbjct: 236 FRNPHLCLAPYVRCLVGSVLYCVLEPLAASINPLND-HWILRDAAALLLSHIFWTHGDHV 294
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L + +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 295 SGLYQHILLSLQKILADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 354
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 355 DYSVSNAQVKADGHKVYGAILVA 377
>gi|403255122|ref|XP_003920296.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L isoform 1
[Saimiri boliviensis boliviensis]
Length = 622
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 196/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 -WAVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDLGQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G
Sbjct: 224 FRNPHLCLAPYVRCLVGSVLYCVLEPLAASINPLND-HWILRDAAALLLSHIFWTHGDHV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L + +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQHILLSLQKILADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|402893067|ref|XP_003909725.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Papio
anubis]
Length = 622
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 197/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +V+ V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVDAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYHQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 FRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L + +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|296218538|ref|XP_002755482.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Callithrix
jacchus]
Length = 622
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 196/383 (51%), Gaps = 32/383 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 166 -WAVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDLGQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G
Sbjct: 224 FRNPHLCLAPYVRCLVGSVLYCVLEPLAASINPLND-HWILRDAAALLLSHIFWTHGDHV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L + +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 283 SGLYQHILLSLQKILADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 342
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 343 DYSVSNAQVKADGHKVYGAILVA 365
>gi|291244770|ref|XP_002742270.1| PREDICTED: TBP-associated factor 6-like [Saccoglossus kowalevskii]
Length = 442
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 135/221 (61%), Gaps = 11/221 (4%)
Query: 138 APVQAIAAPSNGT-NNEQKDGLP------VEIKLPVKHILSRELQLYFDKITELAVSRSD 190
AP + P +G N+ K G+ +++K V H LS E QL++ +ITE V +
Sbjct: 2 APPSLLGVPGSGLLKNKSKTGIASDVVAQLKLKPLVMHELSVEQQLFYKEITEACVGACE 61
Query: 191 SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHI 248
S +AL SL++D GL+ ++P F+ F+A+ V + NN +LL LMR+V L+ N I
Sbjct: 62 S-RRSEALQSLSSDPGLYQMMPRFSTFIAEGVKVNVVQNNLALLIYLMRMVKALMDNTTI 120
Query: 249 QIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRL 307
+E YLH+L+P+V TC+V+K+L R DNHW LRDF A+L+A++CK++ N +Q R+
Sbjct: 121 FLEKYLHELIPAVSTCIVSKQLCLRPDVDNHWALRDFAARLMASLCKKFSTTINNIQARM 180
Query: 308 TKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
TK AL + K L HYG++ GL+ L P V++ +LP +
Sbjct: 181 TKMFDKALQNDKAPLAIHYGSIAGLSELAPEVIKSQVLPRI 221
>gi|410906721|ref|XP_003966840.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like
[Takifugu rubripes]
Length = 639
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 197/390 (50%), Gaps = 36/390 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
V E+V ++A+S G+ D A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 VSHESVRLMAESAGV-ELDDDVAALLAEDVCYRLREATQSSSQFMKHAKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSIVC 122
AL+ NVE ++G + FR ++ +LF ++D+DV ++ + +P+ +T +
Sbjct: 71 ALRWSNVEAIFGCGAQDATPFR-SLKDGELFLVEDRDVNLVELALATNIPKGCAETVVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
+ ++G N E + +P ++ LS EL Y+ ++T
Sbjct: 130 NVSYLDG-------------------KGNLESQGTVPTAVQ-----SLSDELMKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVW 240
A+ D L K AL+ L ++S + L+PYF Y ++ VS L L L+ +V
Sbjct: 166 R-AILGDDPHLMKVALLDLQSNSKIAALLPYFVYVISGVKSVSHDLEQ---LNRLLHMVK 221
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGH 298
+L++NP++ + Y+ L+ SV+ C++ N L D HW LRD+ A L++ I +G
Sbjct: 222 SLVRNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLRDYAALLLSHIFWIHGD 280
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+
Sbjct: 281 LVGGLYHQVLLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAV 340
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQAAGQCI 388
+ N + + +VYGA+L A Q +
Sbjct: 341 LDDNSVSNAQVKADGHKVYGAILVAVEQLL 370
>gi|301607335|ref|XP_002933254.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like isoform
1 [Xenopus (Silurana) tropicalis]
gi|301607337|ref|XP_002933255.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like isoform
2 [Xenopus (Silurana) tropicalis]
Length = 574
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 195/383 (50%), Gaps = 37/383 (9%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
+++V + A+S+G+ + + + A LA DV YR+RE+ Q + +C+RHSRR LT +D + AL
Sbjct: 14 QDSVRLTAESVGL-DITDEVAALLAEDVCYRLRELTQFSAQCLRHSRRRRLTVEDFNRAL 72
Query: 66 KLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSIVCHW 124
+ NVE V G S + + R+I D Y +D+++ ++ + +P+ +T++ H
Sbjct: 73 RWSNVEAVCGHGSPDSVTY-RSIKDGDCHYTEDREINLVELALATNIPKGTPETAVRVHV 131
Query: 125 LAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITEL 184
++G N E + +P + L L+ +L Y+ ++T
Sbjct: 132 SYLDG-------------------KGNLEHQGTVPAAVSL-----LTDDLLKYYQRVTR- 166
Query: 185 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA--DEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ VS L S L L+R +L
Sbjct: 167 AVLGDDPHLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLSRLLQLVR---SL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA--DNHWELRDFTAKLVAAICKRYGHVY 300
L NP + + Y LM SV+ C V + L + ++HW LRD+ A L++ I + +
Sbjct: 224 LWNPFLYLGYYGCSLMQSVLYC-VTEPLAASINPLNDHWTLRDYGAGLLSLIWT-HQDLA 281
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+L ++ ++L L DP R L HYGAV GL ALG V +L P L Y + L+ +
Sbjct: 282 GSLYPQILQSLQKVLGDPVRPLCSHYGAVVGLHALGWKAVEQILYPLLPTYWAGLQTVLD 341
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 342 DHSMSNAQVKADGHKVYGAILVA 364
>gi|147812199|emb|CAN72685.1| hypothetical protein VITISV_036815 [Vitis vinifera]
Length = 213
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/88 (80%), Positives = 81/88 (92%)
Query: 294 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 353
+R+GHVYN QT+LTK LL+A LDPKRA+TQHYGA+QGLAA GPN+VRLL++PNL PYL
Sbjct: 19 RRFGHVYNNQQTQLTKXLLHAFLDPKRAMTQHYGAIQGLAAPGPNMVRLLVVPNLEPYLR 78
Query: 354 LLEPEMLLEKQKNEVKRHEAWRVYGALL 381
LLEPEMLLEKQKNE+KRHEAWRVYGALL
Sbjct: 79 LLEPEMLLEKQKNEIKRHEAWRVYGALL 106
>gi|351696059|gb|EHA98977.1| Transcription initiation factor TFIID subunit 6 [Heterocephalus
glaber]
Length = 381
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 155/308 (50%), Gaps = 75/308 (24%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++P ++++V+A+S+ I+ + L +V YRI+EI Q+A+K M +R LTT D+
Sbjct: 39 TVLPSKSMKVVAESMVIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDI 98
Query: 62 DEALKLRNVEPVYGFASGG--PLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 119
D ALKL NVEP+YGF + P RF A
Sbjct: 99 DYALKLENVEPLYGFHAQEFIPFRFASA-------------------------------- 126
Query: 120 IVCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNG 149
HWL++EG QP IPEN P V+A A P++
Sbjct: 127 ---HWLSMEGCQPAIPENPPPAPKEQQKVEATEPLKSAKPGQEKDGPLKGKGQGATPADS 183
Query: 150 TNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATD 204
E+K +G + +K H LS E QLY+ +ITE V + +AL S+ATD
Sbjct: 184 KRKEKKAPRLLEGASLHLKPHSIHELSVEQQLYYKEITEAYVGSCKAERV-EALQSIATD 242
Query: 205 SGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVV 262
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+
Sbjct: 243 PGLYQMLPRFSTFISERVCVNVAQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVM 302
Query: 263 TCLVAKRL 270
TC+V K +
Sbjct: 303 TCIVQKYI 310
>gi|409042582|gb|EKM52066.1| hypothetical protein PHACADRAFT_262519 [Phanerochaete carnosa
HHB-10118-sp]
Length = 418
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 172/352 (48%), Gaps = 46/352 (13%)
Query: 56 LTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY------RDLFYLDDKDVEFKDVIEA 109
+TT D+D+AL++ N+EP+YG P FRRA Y +++++D++++F +I+
Sbjct: 1 MTTSDIDQALRVLNIEPLYGHYPHNPPTFRRAGPYPPNQAAGAVYFVEDEEIDFDRIIKE 60
Query: 110 PLPRAPLDTSIVCHWLAIEGVQPVIPENAPV-----QAIAAPSNGTNNEQKDG------- 157
P T HWLA+EGVQP+IPEN P + A NG G
Sbjct: 61 EKISVPKGTRWTAHWLAVEGVQPLIPENPPAIPKEHEPEAHGVNGVVKAASAGGSIFPPT 120
Query: 158 -------LPVE-IKLPVKHIL----------SRELQLYFDKITELAVSRSDSVLFKQALV 199
P++ +K P++ SRELQLY+ ++T V D AL
Sbjct: 121 PPSSDRPSPIQAVKRPLQQTTQQQQLVKQVLSRELQLYYTRLTTALVPPVDQTKRTAALA 180
Query: 200 SLATDSGLHPLVPYFTYFVADEVSRGL-------NNYSLLFALMRVVWNLLQNPHIQIEP 252
SL D+GL L+PY +VA+ V L N+ L L+ V+ LL NP + +EP
Sbjct: 181 SLRHDAGLQALLPYLVRWVAEGVVASLRTGAQSDNDGKTLAVLLEVIGALLDNPTLFVEP 240
Query: 253 YLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLL 312
YLHQL+P +++ L+ L A + LR ++ ++ + ++ Y +L R+ KTLL
Sbjct: 241 YLHQLLPPILSTLLHSSLPPEHATH---LRTLASQTLSHLLTQHSTTYPSLSPRIVKTLL 297
Query: 313 NALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQ 364
AL+ +++ GA+ GL +G +R ++ G + E + +E Q
Sbjct: 298 LALIGKDKSMGTREGAIWGLMGIGKEAIRKGVVEGGGAKVVGAECALAMEDQ 349
>gi|430814304|emb|CCJ28448.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 180
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 98/142 (69%), Gaps = 3/142 (2%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P +TV+ +A+SIGIS A LA D+EYRI E++QEA+K MRH++RT LT D+
Sbjct: 4 SVWPPDTVKDVAESIGISQLDDSVAKVLALDIEYRIHEVIQEAMKFMRHAKRTILTVSDI 63
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
AL++ NVEP+YG+ + P+RF ++ G L+YL+D DVEF VI APLP+ P D
Sbjct: 64 SHALRVLNVEPLYGYHAFRPVRFGESLLEQGQPPLYYLEDDDVEFDKVIHAPLPKVPRDI 123
Query: 119 SIVCHWLAIEGVQPVIPENAPV 140
S HWLAIEGVQP IP+N V
Sbjct: 124 SYSVHWLAIEGVQPAIPQNPSV 145
>gi|148235636|ref|NP_001085716.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Xenopus laevis]
gi|49115232|gb|AAH73241.1| MGC80584 protein [Xenopus laevis]
Length = 574
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 194/383 (50%), Gaps = 37/383 (9%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
+++V + A+S+G+ + + + A LA DV YR+RE+ Q + + +RHSRR LT +D + AL
Sbjct: 14 QDSVRLTAESVGL-DITDEVAALLAEDVCYRLRELTQFSAQGLRHSRRRRLTVEDFNRAL 72
Query: 66 KLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSIVCHW 124
+ NVE V G S + + R+I D Y +D+++ ++ + +P+ +T++ H
Sbjct: 73 RWSNVEAVCGHGSSDAVTY-RSIKDGDCHYTEDREINLVELALATNIPKGTPETAVRVHV 131
Query: 125 LAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITEL 184
++G N E + +P + L L+ +L Y+ ++T
Sbjct: 132 SYLDG-------------------KGNLEHQGTVPAAVSL-----LTDDLLKYYQRVTR- 166
Query: 185 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA--DEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ VS L S L L+R +L
Sbjct: 167 AVLGDDPHLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLSRLLQLVR---SL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA--DNHWELRDFTAKLVAAICKRYGHVY 300
L NP + + Y LM SV+ C V + L + ++HW LRD+ A L++ I + +
Sbjct: 224 LWNPFLYLGHYGCSLMQSVLYC-VTEPLAASINPLNDHWTLRDYGAGLLSLIWT-HQDLA 281
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
++ ++ ++L L DP R L HYGAV GL ALG V +L P L Y + L+ +
Sbjct: 282 GSMYPQILQSLQKVLGDPVRPLCSHYGAVVGLHALGWKSVEQILYPLLPTYWAGLQTVLD 341
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 342 DHSMSNAQVKADGHKVYGAILVA 364
>gi|358337993|dbj|GAA56324.1| transcription initiation factor TFIID subunit 6 [Clonorchis
sinensis]
Length = 684
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 58/366 (15%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+ ++ A+ GISN ST AA+ L + R ++ ++ M SRR DVD A
Sbjct: 84 DVAKLCAEMCGISNLSTPAAMLLQKHLNQIARLLVHNILRVMEQSRRGVPQASDVDLASV 143
Query: 67 LRNVEPVYGFASGG--PLRF--RRAI---GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 119
L +E +G P+R R A G + F DK+++ K ++ D S
Sbjct: 144 LIGLEAPFGSTPANFLPIRTGGRTATSGPGGKVFFIRPDKEIDVKALLLREPAGVLYDVS 203
Query: 120 IVCHWLAIEGVQPVIPENAP----------VQAIAAPSNGTNNEQKD------------- 156
+V HWLA+ G QPV P+N P +I +G + ++ D
Sbjct: 204 VVAHWLAVNGKQPVSPQNPPPDFLARMRQFSGSIGKRESGQSVDRNDAASEDSTHGKRPN 263
Query: 157 ------------------GLP-----VEIKLPVK-HILSRELQLYFDKITELAVSRSDSV 192
G+P I + + H +S+E+ +YF ++TE V +
Sbjct: 264 PPLSASKVRTTADGDVVSGVPHPRTISSISVERRPHEVSQEVMIYFRELTEACVGACEK- 322
Query: 193 LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL--LFALMRVVWNLLQNPHIQI 250
+AL + D GL P++PY F+ + V + N++L L LMR+V L+ N HI +
Sbjct: 323 RRHEALDNATLDPGLQPILPYLVTFITEGVRVNVTNHNLAILIYLMRLVKALVDNSHISL 382
Query: 251 EPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTK 309
EPYLH L+P+V+TC++ ++L + + DNHW LRDF AK + +C R+ N L R+T+
Sbjct: 383 EPYLHLLVPTVITCVLNRQLCAKPITDNHWALRDFAAKQLVTLCNRHNTSTNELYNRVTR 442
Query: 310 TLLNAL 315
L ++L
Sbjct: 443 ELSSSL 448
>gi|353239066|emb|CCA70991.1| related to TAF6-Subunit (60 kDa) of TFIID and SAGA complexes
[Piriformospora indica DSM 11827]
Length = 525
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 189/372 (50%), Gaps = 64/372 (17%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
SI E V+ +A SIG+ N + LA DVEYRI ++++EA + RH +RTT+ T D+
Sbjct: 16 SIYSAEAVQDVAASIGLPNLPDELLQRLAKDVEYRIHQVVEEAARFTRHGKRTTMNTQDI 75
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRA----IGYRD-----LFYLDDKDVEFKDVIEAPLP 112
D AL+ N+EP+YG S P FRRA G +++++D++V+F V+
Sbjct: 76 DLALQSLNIEPLYGHLSHMPTVFRRANPNPAGTNSKVAAPVYFVEDEEVDFDKVLRDEKV 135
Query: 113 RAPLDTSIVCHWLAIEGVQPVIPEN--------------APVQAIAAP------SNGTNN 152
P + HWLA+EG+QP+ +N +P +++ AP G N
Sbjct: 136 TLPKMVNWHAHWLAVEGIQPLTADNPPRPPLSEQKGRKQSPPRSVLAPVAPAMQGAGANR 195
Query: 153 EQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFK--------QALVSLATD 204
+ K PVKH+LSRELQ+Y+ ++T + + S+ + AL SL D
Sbjct: 196 KYK---------PVKHVLSRELQIYYSRLTAALLPPASSITDEAQQNARRTAALASLQYD 246
Query: 205 SGLHPLVPYFTYFVADEVSRGLNNY--------------SLLFALMRVVWNLLQNPHIQI 250
+GL L+PY +V V + N L L++V+ L+QN + I
Sbjct: 247 AGLQNLLPYLVRWVGQSVVTAIRNMDERERASKAADATGETLEILLKVIHALIQNERLFI 306
Query: 251 EPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKT 310
EPYLHQ++P +++ L+ L N LR ++++A I ++G Y +L RLTKT
Sbjct: 307 EPYLHQILPPLLSILLTS----SLPANPPTLRRDASEILAFISLQHGTTYPSLSERLTKT 362
Query: 311 LLNALLDPKRAL 322
LL ALL P + L
Sbjct: 363 LLLALLAPSKHL 374
>gi|345308690|ref|XP_001520250.2| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Ornithorhynchus anatinus]
Length = 408
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 147/254 (57%), Gaps = 16/254 (6%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P +T++ A+++GIS S +A L +V +R+++I QEA M+ LTT+DVD
Sbjct: 14 LPIKTIKSWAEAVGISPLSEEACQVLVDEVTFRVKKITQEAKMFMQMGLHQKLTTNDVDF 73
Query: 64 ALKLRNVEPVYGFASGGPLRFR-RAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
AL+L+NVEP+YGF + + FR + G R+L + V D+I +PLP+ LD +
Sbjct: 74 ALQLKNVEPLYGFHTMDFIPFRLTSGGGRELGSFQKEIVSLNDIINSPLPQTSLDVVLKA 133
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
HWL+IEG+QPVIPEN P GT + + ++YF++IT
Sbjct: 134 HWLSIEGIQPVIPEN--------PIPGTERPPPYPPQPTAIIRCSPL----EKMYFEEIT 181
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVW 240
+ D + K+AL SL T+SGL ++P+F+ F+++ V+ GL + ++L +LM++V
Sbjct: 182 RACLGACD-LKRKEALDSLTTNSGLSQMLPWFSNFISEGVRVNVGLRDLTVLTSLMQMVK 240
Query: 241 NLLQNPHIQIEPYL 254
L+ NP + +E Y+
Sbjct: 241 ALMANPTLNLERYV 254
>gi|343424876|emb|CBQ68414.1| related to TAF6-Subunit (60 kDa) of TFIID and SAGA complexes
[Sporisorium reilianum SRZ2]
Length = 725
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 122/224 (54%), Gaps = 40/224 (17%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P +T+ +A+S+GI+ A ALA DVEYRIREI+Q+A K MRHS+R L T D+
Sbjct: 51 SVYPTDTIRDVAESVGINGMKESVAAALAADVEYRIREIVQDATKYMRHSKRDQLKTTDI 110
Query: 62 DEALKLRNVEPVYGF--------ASGGPLRFRRAIGYRD--------LFYLDDKDVEFKD 105
D AL+ RN+EP+YGF + P R+ +R L Y++D++++F
Sbjct: 111 DAALRARNIEPIYGFLPSSSGRSGASNPSRYTAGPTFRRVQTASGVPLHYVEDEEIDFDK 170
Query: 106 VIEAPLPRAPLDTSI--VCHWLAIEGVQPVIPENAPVQAIAAPSNGTN------------ 151
++EA P+ + + HWLAIEGVQP +P+N AIA G+
Sbjct: 171 ILEAG-PKIGIGRGVGWGAHWLAIEGVQPAVPQNPSPIAIAEAKGGSGFMGPTSTQPAAA 229
Query: 152 --------NEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVS 187
DG + L VKHILSRELQLY++++T+ VS
Sbjct: 230 APAAKAVTVAGGDGQAIAKPL-VKHILSRELQLYYERLTKSIVS 272
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 47/167 (28%)
Query: 197 ALVSLATDSGLHPLVPYFTYFVADEV---------------------------SRGLN-- 227
AL SL D GLH LVPY FV +V SR ++
Sbjct: 349 ALASLRGDPGLHQLVPYLIQFVGSKVIEILRSPSTDDSAADADGASTATAVRESRQISAA 408
Query: 228 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN--------------- 272
+ +L L+ + +L NPHI IEPYLHQ+MPS+++ L+ L
Sbjct: 409 DNHMLSVLLSTIHAILVNPHIFIEPYLHQMMPSILSILLTSSLAEPELLRQLQGSDDVHT 468
Query: 273 ---RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 316
+ + LR + L+ + +G Y TL+ R+ TLL AL+
Sbjct: 469 PLVTAGPSSYALRAHASALLTHVVDTFGSSYPTLKPRVVATLLKALM 515
>gi|348546063|ref|XP_003460498.1| PREDICTED: transcription initiation factor TFIID subunit 6-like,
partial [Oreochromis niloticus]
Length = 246
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 105/157 (66%), Gaps = 3/157 (1%)
Query: 196 QALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPY 253
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y
Sbjct: 1 EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY 60
Query: 254 LHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLL 312
LH+L+P+VVTC+V+K+L R DNHW LRDF A+L+A CK + N +Q+R+TKT
Sbjct: 61 LHELIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFT 120
Query: 313 NALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 349
+ LD K T YG + GLA LG +V++ L++P L
Sbjct: 121 KSWLDDKTQWTTRYGCIAGLAELGSDVIKTLIIPRLA 157
>gi|355723136|gb|AES07794.1| TAF6-like RNA polymerase II, p300/CBP-associated factor -associated
factor, 65kDa [Mustela putorius furo]
Length = 432
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 179/354 (50%), Gaps = 35/354 (9%)
Query: 35 YRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLF 94
YR+RE Q + + M+H++R LT +D + AL+ +VE V G+ S L R A +L+
Sbjct: 1 YRLREATQNSSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGELY 59
Query: 95 YLDDKDVEFKDV-IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE 153
+ +D++V ++ + +P+ +T++ H ++G + P+ + A+++
Sbjct: 60 FPEDREVNLVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS-------- 111
Query: 154 QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPY 213
L+ +L Y+ ++T AV D L K AL L T+S + L+PY
Sbjct: 112 ----------------LTDDLLKYYQQVTR-AVLGDDPQLMKIALQDLQTNSKIAALLPY 154
Query: 214 FTYFVAD--EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG 271
F Y V+ VS L L L++V +L++NPH+ + PY+ L+ SV+ C++
Sbjct: 155 FVYVVSGVKSVSHDLEQ---LHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAA 211
Query: 272 --NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 329
N L D HW LRD A L++ I +G + + L ++ +L L DP R L HYGAV
Sbjct: 212 SINPLND-HWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAV 270
Query: 330 QGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
GL ALG V +L P+L Y + L+ + N + + +VYGA+L A
Sbjct: 271 VGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 324
>gi|443896812|dbj|GAC74155.1| hypothetical protein PANT_10d00039 [Pseudozyma antarctica T-34]
Length = 753
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 127/226 (56%), Gaps = 44/226 (19%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P +TV +A+S+GI+ A ALA DVEYRIREI+Q+A K MRHS+R L T D+
Sbjct: 113 SVYPTDTVRDVAESLGINGMKESVAAALAADVEYRIREIVQDATKYMRHSKRDQLKTADI 172
Query: 62 DEALKLRNVEPVYGF---ASG------------GPLRFRRAIGYRD--LFYLDDKDVEFK 104
D AL+ RN+EP+YGF +SG GP+ FRR L Y++D++++F
Sbjct: 173 DAALRARNIEPIYGFLPSSSGRTGGGNPSGYTAGPI-FRRVQTSSGVPLHYIEDEEIDFD 231
Query: 105 DVIEAPLPRAPLDTSI--VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNN---------- 152
++EA P+ + + HWLAIEGVQP +P+N AIA + GT+
Sbjct: 232 KILEAG-PKIGIGRGVGWGAHWLAIEGVQPAVPQNPSPIAIAE-AKGTSGFMGPTSTLPS 289
Query: 153 -----------EQKDGLPVEIKLPVKHILSRELQLYFDKITELAVS 187
DG V L VKHILSRELQLY++++T+ +S
Sbjct: 290 ASVPAAKAVTVAGGDGQAVAKPL-VKHILSRELQLYYERLTKSIIS 334
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 47/167 (28%)
Query: 197 ALVSLATDSGLHPLVPYFTYFVADEV--------------------------SRGLN--N 228
AL SL D GLH LVPY FV +V +R ++ +
Sbjct: 404 ALASLRGDPGLHQLVPYLIRFVGSKVIDILRAPADEAEGGADADGAPAAVRETRQISTAD 463
Query: 229 YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN-------RLAD----- 276
+L L+ + +L NPHI IEPYLHQ+MPS+++ L+ L R AD
Sbjct: 464 NHMLSVLLSTIHAILVNPHIFIEPYLHQMMPSILSILLTSSLAEPELLAQMRNADADVQT 523
Query: 277 -------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 316
+ + LR + L+ + +G Y TL+ R+ TLL AL+
Sbjct: 524 PLITAGPSSYSLRAHASALLTHVVDTFGASYPTLKPRVVATLLKALM 570
>gi|324511760|gb|ADY44890.1| Transcription initiation factor TFIID subunit 6 [Ascaris suum]
Length = 452
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 200/432 (46%), Gaps = 58/432 (13%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+ + V+V+++ +GI++ S D A V Y I+ ++++A K H RR LTTDD++
Sbjct: 17 IDRRFVKVVSEQLGIASLSEDCCNITAEHVTYSIKTLLEQAKKLAVHCRRAHLTTDDIES 76
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYR-----------DLFYLDDKDVEFKDVIEAPLP 112
A ++ E + G + R+++ Y+ ++F +D +V+ + + P
Sbjct: 77 AFRIFGQEAILGHDNS-----RKSVVYKSVADSAEMLDHEVFIAEDAEVDMAAIANSKPP 131
Query: 113 RAPLDTSIVCHWLAIEGVQPVIPEN---APVQAI----------AAPSNGTN---NEQKD 156
+ PL I HWL +G Q +P+N P + + A P++ +
Sbjct: 132 KPPLCPMIRAHWLVYDGEQIYVPQNPIIVPKRIVRLEEHEERFNAIPTSSRRESLTQMSS 191
Query: 157 GLPVEIKLPVK---------------HILSRELQLYFDKITELAVSRSDSVLFKQALVSL 201
G + +L ++ H LS E Q +F + E V D +AL SL
Sbjct: 192 GASIAYRLAMRSTRKAERIYVKPSSSHQLSLEQQRFFRDVLEACVGLDDKRRV-EALESL 250
Query: 202 ATDSGLHPLVPYFTYFVADEVSRGLNNYSL--LFALMRVVWNLLQNPHIQIEPYLHQLMP 259
D+GL L+P + ++A V + SL L ++ LL N + I P LH+++P
Sbjct: 251 QMDTGLQSLLPNISRWLAQGVYANIIQRSLAMLIYIVHAHAALLHNRSLDIHPVLHEMVP 310
Query: 260 SVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 318
S+++C+++++L +R DNHW LRDF +K + + + +G V +T Q R+ + L ++
Sbjct: 311 SLLSCMISRQLCSRPDIDNHWTLRDFASKCLVQLVREHG-VCDT-QKRVQQALRYCFMNS 368
Query: 319 KRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYG 378
+ YGA L L + R P+ L ++P + +R ++ ++Y
Sbjct: 369 SSSANMRYGAFHALFDLSASAERAAFYPHFIEVLHSVDPNVTASMPNQ--RRIDSEKLYA 426
Query: 379 ALL---QAAGQC 387
L+ QA +C
Sbjct: 427 LLVRYEQAMSKC 438
>gi|71019437|ref|XP_759949.1| hypothetical protein UM03802.1 [Ustilago maydis 521]
gi|46099495|gb|EAK84728.1| hypothetical protein UM03802.1 [Ustilago maydis 521]
Length = 701
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 126/224 (56%), Gaps = 40/224 (17%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P +T+ +A+S+GI++ A ALA DVEYRIREI+Q+A K MRHS+R L T D+
Sbjct: 51 SVYPTDTIRDVAESLGINSMKESVAAALAADVEYRIREIVQDAAKYMRHSKRDQLKTIDI 110
Query: 62 DEALKLRNVEPVYGF--------ASGGPLRFRRAIGYRD--------LFYLDDKDVEFKD 105
D AL+ RN+EP+YGF ++ P R+ +R L Y++D++++F
Sbjct: 111 DAALRARNIEPIYGFLPSSSGRSSASDPSRYTAGPTFRRVQTASGVPLHYVEDEEIDFDK 170
Query: 106 VIEAPLPRAPLDTSI--VCHWLAIEGVQPVIPENAPVQAIAAPSN-----GTNNEQK--- 155
++EA PR + + HWLAIEGVQP +P+N AIA G ++ Q
Sbjct: 171 ILEAG-PRIGIGRGVGWGAHWLAIEGVQPAVPQNPSPIAIAEAKGVSGFMGPSSTQPTTA 229
Query: 156 ------------DGLPVEIKLPVKHILSRELQLYFDKITELAVS 187
DG + L VKHILSRELQLY++++T+ VS
Sbjct: 230 APAAKAVTVAGGDGQAIAKPL-VKHILSRELQLYYERLTKSIVS 272
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 73/167 (43%), Gaps = 47/167 (28%)
Query: 197 ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS-------------------------- 230
AL SL D GLH LVPY FV +V L + S
Sbjct: 342 ALASLRGDPGLHQLVPYLIQFVGSKVIETLRSPSQDDTAAASDGSSAAMAVRESQQISTA 401
Query: 231 ---LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK--------RLGNRLADNH- 278
+L L+ V +L NPHI +EPYLHQ+MPS+++ L+ RL + D H
Sbjct: 402 DNHMLGVLLSTVHAILVNPHIFVEPYLHQMMPSILSILLTSSLAEPELLRLSQGMNDGHR 461
Query: 279 ---------WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 316
+ LR + L+ + + +G Y TL+ R+ TLL AL+
Sbjct: 462 PLVTAGPSSYSLRAHASALLTHVVETFGSSYPTLKPRVVATLLKALM 508
>gi|388855779|emb|CCF50563.1| related to TAF6-Subunit (60 kDa) of TFIID and SAGA complexes
[Ustilago hordei]
Length = 700
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 121/224 (54%), Gaps = 40/224 (17%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P +T+ +A+S+GI A ALA DVEYRIREI+Q+A K MRHS+R L T D+
Sbjct: 48 SVYPTDTIRDVAESVGIMGMKESIAAALAADVEYRIREIVQDATKYMRHSKRDQLKTTDI 107
Query: 62 DEALKLRNVEPVYGF---ASG------------GPLRFRRAIGYRD--LFYLDDKDVEFK 104
D AL+ RN+EP+YGF +SG GP FRR L Y++D++++F
Sbjct: 108 DAALRARNIEPIYGFLPSSSGRSSTNIASKYTAGPT-FRRVQTSSGVPLHYVEDEEIDFD 166
Query: 105 DVIEAPLPRAPLDTSIV--CHWLAIEGVQPVIPENAPVQAIAAPSNGTN----------- 151
++EA P+ + + HWLAIEGVQP +P+N AIA T
Sbjct: 167 KILEAG-PKIGIGRGVGWGAHWLAIEGVQPAVPQNPSPIAIAEAKGATGFMGSTTTQPGA 225
Query: 152 -------NEQKDGLPVEIKLP-VKHILSRELQLYFDKITELAVS 187
G I P VKHILSRELQLY++++T+ VS
Sbjct: 226 AAPAAKAVTVAGGEGQAIAKPLVKHILSRELQLYYERLTKSIVS 269
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 85/213 (39%), Gaps = 65/213 (30%)
Query: 197 ALVSLATDSGLHPLVPYFTYFVADEV------------------------SRGLN--NYS 230
AL SL D GLH LVPY FV +V SR ++ +
Sbjct: 337 ALASLRGDPGLHQLVPYLIQFVGSKVIEILRSPSEENEADGESVSTAVRESRQISTADNH 396
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN------------------ 272
+L L+ + +L NPHI IEPYLHQ+MPS+++ L+ L
Sbjct: 397 MLGVLLSTIHAILVNPHIFIEPYLHQMMPSILSVLLTSSLAEPELHRQLHSSDDIQMPLV 456
Query: 273 RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL---------------- 316
+ + LR + L+ + +G Y TL+ R+ TLL AL+
Sbjct: 457 TAGPSSYSLRAHASALLTHVVDTFGSSYPTLKPRVVATLLKALMTGVIPGNNNQDSASRR 516
Query: 317 -----DPKRALTQHYGAVQGLAALGPNVVRLLL 344
+P+ + GA+ L LG R+LL
Sbjct: 517 EAAVREPRASPGTKLGALMALRRLGKASFRMLL 549
>gi|334332576|ref|XP_003341613.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like isoform
2 [Monodelphis domestica]
Length = 590
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 185/383 (48%), Gaps = 57/383 (14%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESAGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ NVE V G+ S L R A DL++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSNVEAVCGYGSQETLPLRPAR-EGDLYFPEDREVNLVELALATNIPKGCPETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G V P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNVEPQGSVPSAVSS------------------------LTDDLLKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K VS ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVKSVS--------------------------HDLEQLHRLLQVARSL 198
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
L+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 199 LRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 257
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
N L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 258 NGLSQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWANLQAVLD 317
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 318 DYSVSNAQVKADGHKVYGAILVA 340
>gi|392579185|gb|EIW72312.1| hypothetical protein TREMEDRAFT_70674 [Tremella mesenterica DSM
1558]
Length = 486
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 187/389 (48%), Gaps = 55/389 (14%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
I P ++V +A + I N AA LA DVEYR+ I QEA K M H++RTTLT+DDV
Sbjct: 7 GIYPPDSVNDVAHGLPIDNLGQGAADLLASDVEYRLHLITQEAKKFMVHAKRTTLTSDDV 66
Query: 62 DEALKLRNVEPVY---------GFASGGPLRFRRAIG--YRDLFYLDDKDVEFKDVIEAP 110
+ A+++ N+EP+ FA ++ G ++Y D +++F ++ P
Sbjct: 67 EYAMEVLNLEPILVPPRPLPQPTFAQ---VQIPTVSGNSTHTIYYAPDDEIDFATYLKQP 123
Query: 111 LPRAPLDTSIV---CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLP----VEIK 163
LP ++ V HWLA+EGVQP IPEN APS ++ LP ++
Sbjct: 124 LPPGLASSAGVKWKAHWLAVEGVQPAIPEN------PAPSARVDSTSPLTLPSTGSAALR 177
Query: 164 LPVKHILSRELQLYFDKITELAVSR---------SDSVLFKQ---ALVSLATDSGLHPLV 211
+ L +ELQLYF ++T V + S + +Q AL SL D + ++
Sbjct: 178 PSARSHLPQELQLYFGRLTAAIVPSTSPPPSPDGTISDVERQRLAALASLRGDQAVGGIL 237
Query: 212 PYFTYFVADEVSRGLNN-YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 270
Y ++A+ V + L + +L L+ + LL N + +EPYLHQL+ +++ L+ L
Sbjct: 238 VYLVKWIAESVQKCLMSPVQVLGYLLDAMEALLDNEAVFVEPYLHQLLAPLMSILLTVPL 297
Query: 271 G------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL-DP----- 318
G ++ +E R + ++ I Y Y L RL TL AL DP
Sbjct: 298 GPHPPTSSQQITAAYETRLRASDVLRKIVDDYSSSYPNLTPRLLSTLSQALQSDPFPSPL 357
Query: 319 ---KRALTQHYGAVQGLAALGPNVVRLLL 344
++ GA+ G++ALG + VR L
Sbjct: 358 GANHPPAGRYEGALLGISALGSHAVRTCL 386
>gi|47209819|emb|CAF92633.1| unnamed protein product [Tetraodon nigroviridis]
Length = 628
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 189/388 (48%), Gaps = 46/388 (11%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
V +E+V ++A+S G+ D A LA D + MRH++R LT +D +
Sbjct: 12 VSRESVRLMAESAGV-ELDDDVAALLAEDSSSQF----------MRHAKRRKLTVEDFNR 60
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSIVC 122
AL+ NVE V+G + FR ++ +LF ++D+DV ++ + +P+ +T +
Sbjct: 61 ALRWSNVEAVFGCGAQDATSFR-SLKEGELFLIEDRDVNLVELALATNIPKGCAETVVRV 119
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
+ ++G N E + +P ++ LS EL Y+ ++T
Sbjct: 120 NVSYLDG-------------------KGNLENQGTVPTAVQ-----SLSDELLKYYQQVT 155
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVW 240
A+ D L K AL+ L ++S + L+PYF Y ++ VS L L L+ +V
Sbjct: 156 R-AILGDDPHLMKVALLDLQSNSKIAALLPYFVYVISGVKSVSHDLEQ---LNRLLHMVK 211
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGH 298
+L++NP++ + Y+ L+ SV+ C++ N L D HW LRD+ A L++ I +G
Sbjct: 212 SLVRNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLRDYAALLLSHIFWIHGD 270
Query: 299 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 358
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+
Sbjct: 271 LVGGLYHQVLLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAV 330
Query: 359 MLLEKQKNEVKRHEAWRVYGALLQAAGQ 386
+ N + + +VYGA+L A Q
Sbjct: 331 LDDNSVSNAQVKADGHKVYGAILVAVEQ 358
>gi|270006902|gb|EFA03350.1| hypothetical protein TcasGA2_TC013335 [Tribolium castaneum]
Length = 316
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 139/241 (57%), Gaps = 16/241 (6%)
Query: 159 PVEIKL-PVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
P+ +KL P H LS E Q++F K+TE A ++ V + L +LA D + L PY + F
Sbjct: 34 PILLKLHPDPHPLSAEEQVFFVKLTEGAFGFNEHVR-NETLQTLARDFHVKFLAPYLSQF 92
Query: 218 VADEVSRGLN--NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA 275
+ D + + + SLL +RVV +L+ NPH+ I+ +LH L+P+V++C+V++++
Sbjct: 93 INDAICVNIAFPDLSLLIYSVRVVKSLMANPHVNIKEHLHLLLPAVISCVVSRKISKYSY 152
Query: 276 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 335
DNHW LRDF+A++VA IC + + N ++TR+ K L A+ DP++ LT YG ++GL+
Sbjct: 153 DNHWTLRDFSAQVVATICCTHSNSINQMKTRVIKVYLRAVQDPRKPLTTVYGGLKGLSCF 212
Query: 336 GPNVVRLLLLPNLGPYLS-----LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAG----Q 386
G VR L+P L P LS +LE + L +E K + R+ +L G Q
Sbjct: 213 GEETVRTCLVP-LIPVLSRRVCMVLEKTVYLGDPSHETK--QIKRITDLVLAVVGPVLLQ 269
Query: 387 C 387
C
Sbjct: 270 C 270
>gi|189237599|ref|XP_001808215.1| PREDICTED: similar to TFIID subunit [Tribolium castaneum]
Length = 372
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 125/206 (60%), Gaps = 5/206 (2%)
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
+ ++ H LS E Q++F K+TE A ++ V + L +LA D + L PY + F+
Sbjct: 12 IHLRRRATHPLSAEEQVFFVKLTEGAFGFNEHVR-NETLQTLARDFHVKFLAPYLSQFIN 70
Query: 220 DEVSRGLN--NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN 277
D + + + SLL +RVV +L+ NPH+ I+ +LH L+P+V++C+V++++ DN
Sbjct: 71 DAICVNIAFPDLSLLIYSVRVVKSLMANPHVNIKEHLHLLLPAVISCVVSRKISKYSYDN 130
Query: 278 HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP 337
HW LRDF+A++VA IC + + N ++TR+ K L A+ DP++ LT YG ++GL+ G
Sbjct: 131 HWTLRDFSAQVVATICCTHSNSINQMKTRVIKVYLRAVQDPRKPLTTVYGGLKGLSCFGE 190
Query: 338 NVVRLLLLPNLGPYLSLLEPEMLLEK 363
VR L+P L P LS M+LEK
Sbjct: 191 ETVRTCLVP-LIPVLS-RRVCMVLEK 214
>gi|302408599|ref|XP_003002134.1| transcription initiation factor TFIID complex 60 kDa subunit
[Verticillium albo-atrum VaMs.102]
gi|261359055|gb|EEY21483.1| transcription initiation factor TFIID complex 60 kDa subunit
[Verticillium albo-atrum VaMs.102]
Length = 398
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 101/146 (69%), Gaps = 2/146 (1%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
E V+ +A+S+GIS+ + DA L D EYRI +++ EA++ MR +RRTTLT D+ +AL+
Sbjct: 90 ENVKDVAESVGISSLNEDALRVLTQDAEYRIGQVVIEALRFMRAARRTTLTVGDIAQALR 149
Query: 67 LRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
+ +VEP+YG+ S PLR+ A +G + L+YL+D++V+F+ +I APLP+ P D S HW
Sbjct: 150 VLDVEPLYGYESTRPLRYGEASLGPGQPLYYLEDEEVDFEKLINAPLPKVPRDMSFTAHW 209
Query: 125 LAIEGVQPVIPENAPVQAIAAPSNGT 150
LAIEGVQP IP+N + + P T
Sbjct: 210 LAIEGVQPSIPQNPTHRRVPKPGVAT 235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Query: 242 LLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLADNHWELRDFTAKLVAAICKRYGHVY 300
L++N ++ ++PY + + V+TCL+ ++LG + + +ELR+F+A L+ I RY
Sbjct: 239 LIENTNLFLDPYANAIAAPVLTCLLGRKLGADDATKDQYELREFSASLLGKIALRYAASN 298
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 348
+ L+ +L +T L +DP + HYGA+ GLAA GP VR+L+L L
Sbjct: 299 HLLRPKLVRTCLKFFMDPDKLPAAHYGAITGLAAAGGPEAVRVLVLKYL 347
>gi|444711067|gb|ELW52021.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Tupaia chinensis]
Length = 820
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 185/383 (48%), Gaps = 57/383 (14%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 254 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 312
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V D+ + +P+ +T++
Sbjct: 313 ALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVDLALATNIPKGCAETAVRV 371
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 372 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 407
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K VS ++ L L++V +L
Sbjct: 408 R-AVLGDDPQLMKVKSVS--------------------------HDLEQLHRLLQVARSL 440
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 441 VRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 499
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 500 SGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLD 559
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 560 DYSVSNAQVKADGHKVYGAILVA 582
>gi|26345988|dbj|BAC36645.1| unnamed protein product [Mus musculus]
Length = 591
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 185/383 (48%), Gaps = 57/383 (14%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A DL++ +D++V ++ A +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPLRPAR-EGDLYFPEDREVSLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K VS ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVKSVS--------------------------HDLEQLHRLLQVARSL 198
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 199 IRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 257
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 258 SGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLD 317
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 318 DYSVSNAQVKADGHKVYGAILVA 340
>gi|295317365|ref|NP_001171269.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L isoform 2 [Mus musculus]
Length = 598
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 185/383 (48%), Gaps = 57/383 (14%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 19 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 77
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A DL++ +D++V ++ A +P+ +T++
Sbjct: 78 ALRWSSVEAVCGYGSQEALPLRPAR-EGDLYFPEDREVSLVELALATNIPKGCAETAVRV 136
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 137 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 172
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K VS ++ L L++V +L
Sbjct: 173 R-AVLGDDPQLMKVKSVS--------------------------HDLEQLHRLLQVARSL 205
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 206 IRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 264
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 265 SGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLD 324
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 325 DYSVSNAQVKADGHKVYGAILVA 347
>gi|148701423|gb|EDL33370.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, isoform CRA_b [Mus musculus]
Length = 604
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 185/383 (48%), Gaps = 57/383 (14%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 25 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 83
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A DL++ +D++V ++ A +P+ +T++
Sbjct: 84 ALRWSSVEAVCGYGSQEALPLRPAR-EGDLYFPEDREVSLVELALATNIPKGCAETAVRV 142
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 143 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYQQVT 178
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K VS ++ L L++V +L
Sbjct: 179 R-AVLGDDPQLMKVKSVS--------------------------HDLEQLHRLLQVARSL 211
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 212 IRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 270
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L ++ +L L DP R L HYGAV GL ALG V +L P+L Y + L+ +
Sbjct: 271 SGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLD 330
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 331 DYSVSNAQVKADGHKVYGAILVA 353
>gi|405120527|gb|AFR95297.1| transcription initiation factor TFIID complex 60 kDa subunit
[Cryptococcus neoformans var. grubii H99]
Length = 520
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 179/382 (46%), Gaps = 41/382 (10%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M I P E+++ +AQS+ + AA LA DVEYR+ I+QEA K M H++R+TL +D
Sbjct: 7 MGIYPSESIQEVAQSLPLDPLGPGAATLLAGDVEYRLHLILQEAKKFMVHAKRSTLMPED 66
Query: 61 VDEALKLRNVEPV------YGFASGGPLRFRRAIGY---RDLFYLDDKDVEFKDVIEAPL 111
V+ AL+ NVEP+ S PL + ++ D +++F ++ PL
Sbjct: 67 VEHALEALNVEPILIPPRPLAIPSFHPLNLPPPAANMPPQTIYTTPDDEIDFASYLKEPL 126
Query: 112 PRAPLDTSIV---CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLP----VEIKL 164
P ++ V HWLA+EGVQP +PEN +I A G ++ G P +K
Sbjct: 127 PAGIASSAGVKWKAHWLAVEGVQPAVPENPAPSSIHA-GAGAGGQRVKGAPAPASTTLKP 185
Query: 165 PVKHILSRELQLYFDKITELAVSRSDSVLFKQ-------ALVSLATDSGLHPLVPYFTYF 217
+ L +ELQLYF ++T V + ++ + AL SL D + ++ Y +
Sbjct: 186 SARAHLPQELQLYFTRLTTALVPPTATLPESEPERHRLAALASLRNDVAVAGMLVYVVKW 245
Query: 218 VADEVSRGLNNYSLLFA-LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD 276
+ + + + L + L+ V LL N + IEPY+HQL+P +++ ++ LG
Sbjct: 246 LCESIQKCLMAPTASIGHLVDAVGALLANEGLFIEPYMHQLLPPLLSIILTVPLGPHPPQ 305
Query: 277 NH-------WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP---------KR 320
+ E+R + +++ I + Y L RL T AL P
Sbjct: 306 SAASSQPSPTEIRSRASDVLSKIASTFSPSYPGLIPRLVSTFTKALHSPPFPSPLGAANP 365
Query: 321 ALTQHYGAVQGLAALGPNVVRL 342
++ GA+ L LGP V++
Sbjct: 366 PTGRYEGAILALGGLGPQAVKV 387
>gi|297688428|ref|XP_002821688.1| PREDICTED: LOW QUALITY PROTEIN: TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa
subunit 6L [Pongo abelii]
Length = 623
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 196/386 (50%), Gaps = 37/386 (9%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ + +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYHQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ S ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSGXKSVS-HDLEQLHRLLQVARSL 223
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 224 FRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 282
Query: 301 NTLQTRLTKTLLNALLDPKRALT--QHYGAVQ-GLAALGPNVVRLLLLPNLGPYLSLLEP 357
+ L + + L +LD A +HYG+ + G LG V R +L P+L Y + L+
Sbjct: 283 SGLYQHILLS-LQKILDRSCAACSARHYGSREWGCMLLGVAVER-VLYPHLSTYWTNLQA 340
Query: 358 EMLLEKQKNEVKRHEAWRVYGALLQA 383
+ N + + +VYGA+L A
Sbjct: 341 VLDDYSVSNAQVKADGHKVYGAILVA 366
>gi|58267138|ref|XP_570725.1| hypothetical protein CNE00290 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134111533|ref|XP_775302.1| hypothetical protein CNBE0210 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257961|gb|EAL20655.1| hypothetical protein CNBE0210 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226959|gb|AAW43418.1| hypothetical protein CNE00290 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 520
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 169/349 (48%), Gaps = 32/349 (9%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M I P E+++ +AQS+ + AA LA DVEYR+ I+QEA K M H++R+TL +D
Sbjct: 7 MGIYPSESIQEVAQSLPLDPLGPGAATLLAGDVEYRLHLILQEAKKFMVHAKRSTLMPED 66
Query: 61 VDEALKLRNVEPV------YGFASGGPLRFRRAIGY---RDLFYLDDKDVEFKDVIEAPL 111
V+ AL+ NVEP+ S PL + ++ D +++F ++ PL
Sbjct: 67 VEHALEALNVEPILIPPRPLALPSFHPLNLPPPAANMPPQTIYTTTDDEIDFASYLKEPL 126
Query: 112 PRAPLDTSIV---CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLP----VEIKL 164
P ++ V HWLA+EGVQP +PEN +I A + G K G P +K
Sbjct: 127 PAGIASSAGVKWKAHWLAVEGVQPAVPENPAPSSIHAGAGGGAQRVK-GAPAPASTTLKP 185
Query: 165 PVKHILSRELQLYFDKITELAVSRSDSVLFKQ-------ALVSLATDSGLHPLVPYFTYF 217
+ L +ELQLYF ++T V + ++ + AL SL D + ++ Y +
Sbjct: 186 SARAHLPQELQLYFTRLTTALVPPTATLPESEPERHRLAALASLRNDVAVAGMLVYVVKW 245
Query: 218 VADEVSRGLNNYSLLFA-LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG----- 271
+ + + + L + L+ V LL N + IEPY+HQL+P +++ ++ LG
Sbjct: 246 LCESIQKCLMAPTASIGHLVDAVGALLANEGLFIEPYMHQLLPPLLSIILTVPLGPHPPQ 305
Query: 272 --NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 318
+ + E+R + +++ I Y Y L RL TL AL P
Sbjct: 306 PASSSQPSPTEIRSRASDVLSKIASTYSPSYPGLIPRLVSTLTKALHSP 354
>gi|339234154|ref|XP_003382194.1| conserved hypothetical protein [Trichinella spiralis]
gi|316978834|gb|EFV61753.1| conserved hypothetical protein [Trichinella spiralis]
Length = 484
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 160/319 (50%), Gaps = 33/319 (10%)
Query: 48 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLD-DKDVEFKDV 106
+R RR LTT D+ L+ R +P+ F +G L R I +D Y+D D+++E
Sbjct: 51 LRCGRR--LTTSDITRILRNRGAQPINFFGNGAYLPAR--IAGKDGLYVDVDEELELSTF 106
Query: 107 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLP------V 160
++ R PL++ + +WL E + E A V + A +Q++ L +
Sbjct: 107 LKDCNLRPPLESRLFAYWLLNENEET---EKARVDLMLAEKKVEIEQQQNALEERKQQRL 163
Query: 161 EIKLPV---KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 217
E P+ + +S+E+Q YF +TE V D K AL LA D+ L L+P+F F
Sbjct: 164 ECVYPMLCRPNSISKEMQSYFFTVTEACVCH-DEERRKLALAGLANDTSLKCLLPHFVSF 222
Query: 218 VADEVSRGL------NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG 271
+ RG+ +++ + LMR++ +L+NP + YLH+L+PS++ C + RL
Sbjct: 223 I----HRGILVNALGSSFVVCIYLMRMIDAILKNPSFNCDLYLHRLLPSMLNCALYTRLS 278
Query: 272 NR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQ 330
+ A+ HW LRDF+AK +A + + H L+TR+ K L + DP + YGAV
Sbjct: 279 AKPEANEHWRLRDFSAKNIAKVVSKNKH----LRTRVEKLLGRVINDPHSSFHNIYGAVA 334
Query: 331 GLAALGPNVVRLLLLPNLG 349
L LG + LLP+L
Sbjct: 335 TLVELGVEEIERTLLPSLN 353
>gi|299115204|emb|CBN74035.1| transcription initiation factor TFIID subunit 6 [Ectocarpus
siliculosus]
Length = 578
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 181/410 (44%), Gaps = 54/410 (13%)
Query: 18 ISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFA 77
+ S D L+ EY + +++ +A +R+ LT DDV +L+LR E
Sbjct: 17 VGEVSEDVLSFLSASAEYHLLDVINDASNFRARGKRSRLTVDDVTASLELRGAEGSL-VC 75
Query: 78 SGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN 137
SGG + + + D D V+ + V A LP P++ HWLA++G QP++P+N
Sbjct: 76 SGGGSKSKDS----DDSATADGKVDLRKVANATLPVCPIEPGFHMHWLAVDGQQPLLPQN 131
Query: 138 APVQAIAAPSNGTNNEQK------------DGLPVEIKLPVKHILSRELQLYFDKITELA 185
P+ PS+G + G V+ LS EL Y + +
Sbjct: 132 -PL-----PSSGRGKGKSGKRGRGKQGGGGAGGSGGGSSAVRARLSEELTTYLRRCCDAI 185
Query: 186 VSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS---LLFALMRVVWNL 242
+SR D +AL SL D GL L+P+ F+ +V L L AL++++ L
Sbjct: 186 LSR-DEPKRSRALASLREDPGLQQLLPHLCTFIQTKVPEYLKRQKEPDQLAALLQMLQCL 244
Query: 243 LQNPHIQ-IEPYLHQLMPSVVTCLVA---KRLG----------------------NRLAD 276
L N + +E YL +L+P +++CL+ +R G R
Sbjct: 245 LNNKNFAFLEIYLDRLLPPLMSCLLHIDFERAGLDTGGSANSDSSSFGGMGVHSAARPKW 304
Query: 277 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALG 336
HW++RD+ A+L+ AIC ++G+ Y TLQ R + PK LT YGA+ G+A LG
Sbjct: 305 THWDVRDYAAELLRAICDKHGNTYPTLQARANDMFDTHVARPKTRLTTLYGAITGVACLG 364
Query: 337 PNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKR-HEAWRVYGALLQAAG 385
V L P + + L + + K EA + ALL+A G
Sbjct: 365 RMPVEQTLGPRVDSLADKISQSCLAATLRRDTKSVTEANQCRIALLRAIG 414
>gi|321258761|ref|XP_003194101.1| hypothetical protein CGB_E0240C [Cryptococcus gattii WM276]
gi|317460572|gb|ADV22314.1| Hypothetical protein CGB_E0240C [Cryptococcus gattii WM276]
Length = 522
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 170/350 (48%), Gaps = 32/350 (9%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M I P E+++ +AQS+ + AA LA DVEYR+ I+QEA K M H++R+TL +D
Sbjct: 7 MGIYPSESIQEVAQSLPLDALGPGAATLLAGDVEYRLHLILQEAKKFMVHAKRSTLMPED 66
Query: 61 VDEALKLRNVEPV------YGFASGGPLRF---RRAIGYRDLFYLDDKDVEFKDVIEAPL 111
V+ AL+ NVEP+ S PL + + ++ D +++F ++ PL
Sbjct: 67 VEHALEALNVEPILIPPRPLALPSFHPLNLPPPAANMPSQTIYTTPDDEIDFVSYLKEPL 126
Query: 112 PRAPLDTSIV---CHWLAIEGVQPVIPEN-APVQAIAAPSNGTNNEQKDGLP----VEIK 163
P ++ V HWLA+EGVQP +PEN AP G++ ++ G P +K
Sbjct: 127 PAGIASSAGVKWKAHWLAVEGVQPAVPENPAPSSIHPGAGAGSSGQRVKGAPAPASTTLK 186
Query: 164 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQ-------ALVSLATDSGLHPLVPYFTY 216
+ L +ELQLYF ++T V + ++ + AL SL D + ++ Y
Sbjct: 187 PSARAHLPQELQLYFTRLTTALVPPATTLPESEPERHRLAALASLRNDVAVAGMLVYVVK 246
Query: 217 FVADEVSRGLNNYSLLFA-LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA 275
++ + + + L + L+ V LL N + IEPY+HQL+P +++ ++ LG
Sbjct: 247 WLCESIQKCLMAPTASIGHLVDAVGALLANEGLFIEPYMHQLLPPLLSIILTVPLGPHPP 306
Query: 276 D-------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 318
+ E+R + +++ I Y Y L RL TL AL P
Sbjct: 307 QPASLSQPSPTEIRSRASDVLSKIASTYSPSYPGLIPRLVMTLTRALHSP 356
>gi|323309179|gb|EGA62406.1| Taf6p [Saccharomyces cerevisiae FostersO]
Length = 209
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 94/139 (67%), Gaps = 6/139 (4%)
Query: 5 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEA 64
P++TV+ +A S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +A
Sbjct: 13 PQDTVKDVAGSLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKA 72
Query: 65 LKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
L++ NVEP+YG+ G + F + G + ++YLD+++V+F +I PLP+ P
Sbjct: 73 LRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLP 132
Query: 119 SIVCHWLAIEGVQPVIPEN 137
+ HWLA+EGVQP I +N
Sbjct: 133 TFTTHWLAVEGVQPAIIQN 151
>gi|332250027|ref|XP_003274155.1| PREDICTED: LOW QUALITY PROTEIN: TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa
subunit 6L [Nomascus leucogenys]
Length = 629
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 188/393 (47%), Gaps = 45/393 (11%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQ--LSVMKHTKRRKLTVEDFNR 68
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ A +P+ +T++
Sbjct: 69 ALRWSSVEAVCGYGSQEALPMRPA-KEGELYFPEDREVNLVELALATNIPKGCAETAVRV 127
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 128 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYHQVT 163
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYF-----------TYFVADEVSRGLNNYSL 231
AV D L K VS G F ++ + +V ++ S
Sbjct: 164 R-AVLGDDPQLMK---VSEWAQVGAQSXTCKFYELFFFFFLRQSFALVSQVGVQWHDLSS 219
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN-RLADNHWELRDFTAKLVA 290
L++V +L NPH+ + PY+ L+ SV+ C++ + ++HW LRD A L++
Sbjct: 220 PHRLLQVARSLFXNPHLCLGPYVRCLVGSVLYCVLEPLAASINPXNDHWTLRDGAALLLS 279
Query: 291 AICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGP 350
I +G + + L + +L L DP R L HYGAV GL ALG V +L P+L
Sbjct: 280 HIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLST 339
Query: 351 YLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
Y + L+ + N + + +VYGA+L A
Sbjct: 340 YWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 372
>gi|402223220|gb|EJU03285.1| TAF-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 487
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 193/360 (53%), Gaps = 26/360 (7%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
++ ++++ +A S+G+ A ALA DVEYRI ++++EA++ M+H++RT LTT D+
Sbjct: 28 GVIQSDSIKDVADSLGVGGLQEAIASALASDVEYRINQVIEEAVRYMKHAKRTVLTTADI 87
Query: 62 DEALKLRNVEPVYGFASGGPLRFRR-----AIGYRDLFYLDDKDVEFKDVIEAPLPRAPL 116
D AL+ N+EP+YG + PL FRR + ++ ++D++V+ + V+ + P
Sbjct: 88 DLALRNLNIEPLYGHSPSVPLSFRRFQPNHSEAKSFVYAVEDEEVDLERVVRERRVKVPR 147
Query: 117 DTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD--GLPVEIKLPVKHILSREL 174
+ + HWLA+EGVQ P+ P T++ Q D P + L L
Sbjct: 148 EVGVKPHWLAVEGVQ-------PLIPENPPPPPTSHTQTDRPSSPSSPPSSLPSSLPLPL 200
Query: 175 QLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL-----NNY 229
QLY ++ +S D AL SLA D+GL LVP +V + V+R L +
Sbjct: 201 QLYHTRLLSALLS-PDDARRAAALASLAADAGLQLLVPNLVNWVGERVTRELARAEEGDP 259
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLV 289
++L + ++ ++ +N +I +EPYLHQ++P +++ L+ LR A +
Sbjct: 260 AVLQVALGMIGSMAKNENIFLEPYLHQILPPLLSLLLVH------PHPAPSLRPVAASTL 313
Query: 290 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 349
+ Y Y TL +RL KTLL ALL+P+RAL GAV+GLAALG VR L+ + G
Sbjct: 314 HQLITLYSPKYTTLASRLLKTLLRALLEPERALPTRAGAVRGLAALGVEGVRRGLVESRG 373
>gi|46310076|gb|AAS87319.1| CG9348-like protein [Drosophila miranda]
Length = 163
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 88/139 (63%), Gaps = 1/139 (0%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ E+++VIA+SIG+ S DAA L D+ +++ I+Q+A K H++R + D+
Sbjct: 5 SVYSAESIKVIAESIGVGTLSDDAAKELGEDISIKLKRIVQDAAKFSNHAKRQKILISDI 64
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D +LKLRNVEP YGF S + FR A G R+L + +DK+++ ++ + PLDT++
Sbjct: 65 DMSLKLRNVEPQYGFVSKDNIPFRFATGGGRELHFTEDKEIDLSEITANNAVKIPLDTTL 124
Query: 121 VCHWLAIEGVQPVIPENAP 139
HW +EG+QP +PEN P
Sbjct: 125 RSHWFVVEGIQPTVPENPP 143
>gi|406697734|gb|EKD00987.1| hypothetical protein A1Q2_04674 [Trichosporon asahii var. asahii
CBS 8904]
Length = 783
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 187/394 (47%), Gaps = 47/394 (11%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
+ V+ + QS+ + AA LA DVEYR+ ++QEA K M H +RTTL +DV+ A+
Sbjct: 313 RANVQEVHQSLPLDPLGPGAADLLAGDVEYRLHFLLQEAKKFMVHGKRTTLLPEDVEHAM 372
Query: 66 KLRNVEPVYGFASGGPLRFRRAI----GYR----DLFYLDDKDVEFKDVIEAPLPRAPLD 117
+ +VEPV P A+ G + L++ D +++F ++ PLP A +
Sbjct: 373 EALSVEPVIVPPRPLPQAPFHAVPVPGGSQGPAGQLYHEIDDEIDFATYLKEPLPPALAN 432
Query: 118 TSIV---CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSREL 174
++ V HWLA+EGVQP IPEN A + P+ Q ++ K L+ EL
Sbjct: 433 SAGVKWKAHWLAVEGVQPAIPENPAPTARSGPT----RPQPTTGSAALRQNAKTHLTTEL 488
Query: 175 QLYFDKITELAVSRSDSV--------------LFKQ-------ALVSLATDSGLHPLVPY 213
QLYF ++T V + ++ F + AL S+ +D+ + ++ Y
Sbjct: 489 QLYFSRLTAALVPSTAALAQLPGNPAPGSTAHAFPEAERHRLAALASVRSDAAVAGVLAY 548
Query: 214 FTYFVADEVSRGLNNYS-LLFALMRVVWNLLQNPHIQIEPY-LHQLMPSVVTCLVAKRLG 271
+V++ +++ L + + L+ VV +L N + +EPY L L+ ++T +
Sbjct: 549 LIRWVSESITKCLMGATGTIGCLIDVVEAILDNDVLFVEPYFLGPLLSILLTVPLGPHPV 608
Query: 272 NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP---------KRAL 322
+ ++LR + ++A + +Y Y L RL TL AL P
Sbjct: 609 TGPGPSPFDLRSRASDVLAKLVSQYAATYPGLIPRLLSTLTKALQAPPFPSPLGADHPPA 668
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 356
++ GAV G++ALGP VR L G L++++
Sbjct: 669 GRYEGAVLGISALGPQSVRSTLWGKRGEGLAVID 702
>gi|401886199|gb|EJT50256.1| hypothetical protein A1Q1_00483 [Trichosporon asahii var. asahii
CBS 2479]
Length = 783
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 187/394 (47%), Gaps = 47/394 (11%)
Query: 6 KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEAL 65
+ V+ + QS+ + AA LA DVEYR+ ++QEA K M H +RTTL +DV+ A+
Sbjct: 313 RANVQEVHQSLPLDPLGPGAADLLAGDVEYRLHFLLQEAKKFMVHGKRTTLLPEDVEHAM 372
Query: 66 KLRNVEPVYGFASGGPLRFRRAI----GYR----DLFYLDDKDVEFKDVIEAPLPRAPLD 117
+ +VEPV P A+ G + L++ D +++F ++ PLP A +
Sbjct: 373 EALSVEPVIVPPRPLPQAPFHAVPVPGGSQGPAGQLYHEIDDEIDFATYLKEPLPPALAN 432
Query: 118 TSIV---CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSREL 174
++ V HWLA+EGVQP IPEN A + P+ Q ++ K L+ EL
Sbjct: 433 SAGVKWKAHWLAVEGVQPAIPENPAPTARSGPT----RPQPTTGSAALRQNAKTHLTTEL 488
Query: 175 QLYFDKITELAVSRSDSV--------------LFKQ-------ALVSLATDSGLHPLVPY 213
QLYF ++T V + ++ F + AL S+ +D+ + ++ Y
Sbjct: 489 QLYFSRLTAALVPSTAALAQLPGNPAPGSTAHAFPEAEWHRLAALASVRSDAAVAGVLAY 548
Query: 214 FTYFVADEVSRGLNNYS-LLFALMRVVWNLLQNPHIQIEPY-LHQLMPSVVTCLVAKRLG 271
+V++ +++ L + + L+ VV +L N + +EPY L L+ ++T +
Sbjct: 549 PIRWVSESITKCLMGATGTIGCLIDVVEAILDNDVLFVEPYFLGPLLSILLTVPLGPHPV 608
Query: 272 NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP---------KRAL 322
+ ++LR + ++A + +Y Y L RL TL AL P
Sbjct: 609 TGPGPSPFDLRSRASDVLAKLVSQYAATYPGLIPRLLSTLTKALQAPPFPSPLGADHPPA 668
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 356
++ GAV G++ALGP VR L G L++++
Sbjct: 669 GRYEGAVLGISALGPQSVRSTLWGKRGEGLAVID 702
>gi|395544394|ref|XP_003774095.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L isoform 1
[Sarcophilus harrisii]
Length = 276
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 153/294 (52%), Gaps = 36/294 (12%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESAGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSIVC 122
AL+ NVE V G+ S L R A DL++ +D++V ++ + +P+ +T++
Sbjct: 71 ALRWSNVEAVCGYGSQETLPLRPA-REGDLYFPEDREVNLVELALATNIPKGCPETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G V P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNVEPQGSVPSAVSS------------------------LTDDLLKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA--DEVSRGLNNYSLLFALMRVVW 240
AV D L K AL L T+S + L+PYF Y V+ VS L L L++V
Sbjct: 166 R-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQ---LHRLLQVAR 221
Query: 241 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAI 292
+LL+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I
Sbjct: 222 SLLRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHI 274
>gi|443686648|gb|ELT89843.1| hypothetical protein CAPTEDRAFT_177124 [Capitella teleta]
Length = 387
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 187/388 (48%), Gaps = 35/388 (9%)
Query: 2 SIVPKETVEVIAQSIGI-SNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
+++ ++T+ A++ G ++ + A LA DV YR+RE++Q + M H +R L+ D
Sbjct: 15 AVLSRQTIRTFAEAAGNGADMPDEIASVLAEDVVYRLRELVQVGCQYMEHGKRRKLSVAD 74
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKD-VIEAPLPRAPLDTS 119
++ AL ++ P+ G S + + + ++ +D DV + + LP + S
Sbjct: 75 LNRALLQKDCAPICGHGSPDSVHWVH-VKEAEVTAAEDNDVLLGNFACNSELPTRNGNVS 133
Query: 120 IVCHWLAIEGVQPVIP-ENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYF 178
+ W+A+EG Q P N PV + A P N L ELQ ++
Sbjct: 134 LQAQWIAVEGFQKTNPASNTPVTS-AKPRN---------------------LLEELQHHY 171
Query: 179 DKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRV 238
+ +T+ A+ DS+L AL L T++ + PL+ F+ + + + ++ L L+
Sbjct: 172 ELLTK-AILSCDSLLTHSALEDLKTNTRIVPLLRNLVNFITNGIRKLNHDPCRLLCLLYA 230
Query: 239 VWNLLQNPHIQIE--PYLHQLMPSVVTCLV---AKRLGNRLADNHWELRDFTAKLVAAIC 293
V +LL+N I +E PY+ L+ V C V ++ +R + W +RD+ A+L+A +
Sbjct: 231 VNSLLRNKIIYLESQPYMAVLVDCVRHCAVEPLSQSSKSRF--DQWIMRDYAARLLAFMI 288
Query: 294 KRYGHV-YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYL 352
+ V L+ ++T+ L L DP + HYGAV L A+G +LP++
Sbjct: 289 QSVLKVPVIKLKHQVTQGLNKILADPTKPFCSHYGAVSILTAIGAQSFEKCVLPHVVTLW 348
Query: 353 SLLEPEMLLEKQKNEVKRHEAWRVYGAL 380
S L+ + + N ++ +A RV GA+
Sbjct: 349 SHLQTAIEDCSKSNVRQKMDAIRVCGAI 376
>gi|238598036|ref|XP_002394498.1| hypothetical protein MPER_05606 [Moniliophthora perniciosa FA553]
gi|215463610|gb|EEB95428.1| hypothetical protein MPER_05606 [Moniliophthora perniciosa FA553]
Length = 233
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 89/146 (60%), Gaps = 12/146 (8%)
Query: 20 NFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASG 79
N S A+ALA DVEYRI ++++EA K MRH RTTLTT D+D+AL++ N+EP+YG +
Sbjct: 9 NISDSVAVALASDVEYRIHQVVEEAAKFMRHGCRTTLTTADIDQALRVLNIEPLYGHSPY 68
Query: 80 GPLRFRRAIGY--------RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQ 131
P FRRA+ + +++++D++++F V+ P S HWLA+EGVQ
Sbjct: 69 APPTFRRALPFVSGGLAPAGSVYFVEDEEIDFDRVLREEKITLPKGVSWTAHWLAVEGVQ 128
Query: 132 PVIPENAPVQAIAAPSNGTNNEQKDG 157
P+IPEN P A P G E + G
Sbjct: 129 PLIPENPP----AIPREGDVPETEFG 150
>gi|297267614|ref|XP_002799526.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like [Macaca
mulatta]
Length = 593
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 172/383 (44%), Gaps = 61/383 (15%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQAVCG----------------- 53
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTSIVC 122
YG P+R R +L++ +D++V ++ A +P+ +T++
Sbjct: 54 ----------YGSQEALPMRPARE---GELYFPEDREVNLVELALATNIPKGCAETAVRV 100
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G + P+ + A+++ L+ +L Y+ ++T
Sbjct: 101 HVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYHQVT 136
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V +L
Sbjct: 137 R-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDLEQLHRLLQVARSL 194
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVY 300
+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G +
Sbjct: 195 FRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHGDLV 253
Query: 301 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
+ L + +L L DP R L HYGAV GL ALG V +L P+L
Sbjct: 254 SGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLXXXXXXXXXXXX 313
Query: 361 LEKQKNEVKRHEAWRVYGALLQA 383
N + + +VYGA+L A
Sbjct: 314 XXXXXNAQVKADGHKVYGAILVA 336
>gi|349803133|gb|AEQ17039.1| putative transcription initiation factor tfiid subunit 6 [Pipa
carvalhoi]
Length = 126
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 39 EIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLD 97
E+ Q+A+K M +R LT D+D ALKL+NVEP+YGF + L FR A G R+L + +
Sbjct: 1 EVTQDAVKFMHVGKRQKLTPSDIDSALKLKNVEPIYGFHAKEFLPFRYASGGGRELPFYE 60
Query: 98 DKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 139
+K+V+ D+I PLPR P+D S+ HWL+IEGVQP IPEN P
Sbjct: 61 EKEVDLSDIISTPLPRVPMDVSLKAHWLSIEGVQPAIPENPP 102
>gi|196004762|ref|XP_002112248.1| hypothetical protein TRIADDRAFT_23396 [Trichoplax adhaerens]
gi|190586147|gb|EDV26215.1| hypothetical protein TRIADDRAFT_23396 [Trichoplax adhaerens]
Length = 154
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S K++V+ IA+S G+ D +A +V ++ I+Q+++K MRHSRR+ LT DD+
Sbjct: 6 SSFSKQSVQAIAESCGVMPIEDDCYQVIADEVSANLKAIIQDSMKFMRHSRRSKLTPDDI 65
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEA-PLPRAPLDTS 119
D ALKLRN EP+YGF S + FR A G R L + D+++ + +E+ +P+ P+D+
Sbjct: 66 DLALKLRNREPLYGFTSRDFVPFRYASGQGRRLHFQPDEELNLTEFLESLQVPQVPIDSY 125
Query: 120 IVCHWLAIEGVQPVIPEN 137
+ HWL++EG QP+I EN
Sbjct: 126 VRSHWLSVEGTQPLIQEN 143
>gi|119596996|gb|EAW76590.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_c [Homo sapiens]
Length = 165
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
Query: 227 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFT 285
NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R DNHW LRDF
Sbjct: 36 NNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFA 95
Query: 286 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNV 339
A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA LG +V
Sbjct: 96 ARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGHDV 149
>gi|392311681|pdb|4ATG|A Chain A, Taf6 C-Terminal Domain From Antonospora Locustae
Length = 196
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 106/184 (57%), Gaps = 10/184 (5%)
Query: 168 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 227
H+L +ELQLYFDKI L++ +SD + A+ L +SGL LVPYF +++ + +
Sbjct: 3 HMLPKELQLYFDKI--LSMIKSD--MKDIAIECLEKESGLQQLVPYFIQHISELILKSFK 58
Query: 228 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 287
+L + + ++L++N H+ I+PYLHQ++PS++TC++ G + D+ ++R +A
Sbjct: 59 EAEVLKTCIALYFSLIKNKHVFIDPYLHQILPSLLTCVI----GKSIVDD--DVRKMSAD 112
Query: 288 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 347
+V I Y Y TL R+ KTL +DP R+ YGA+ L+ L NVV ++ +
Sbjct: 113 IVKYIYDTYSRSYKTLAPRVLKTLKGVWMDPNRSEDSQYGALYCLSILSKNVVNTVIREH 172
Query: 348 LGPY 351
Y
Sbjct: 173 AEEY 176
>gi|196006796|ref|XP_002113264.1| hypothetical protein TRIADDRAFT_57235 [Trichoplax adhaerens]
gi|190583668|gb|EDV23738.1| hypothetical protein TRIADDRAFT_57235 [Trichoplax adhaerens]
Length = 450
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 159/332 (47%), Gaps = 42/332 (12%)
Query: 8 TVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKL 67
T++ A +G + + A L+ D YRIR ++Q A + M HS+RT + TDDV++A KL
Sbjct: 35 TMKQWADQLGFGEVNDEVAALLSEDASYRIRHLIQVASEVMIHSKRTRMMTDDVNKAAKL 94
Query: 68 RNVEPVYGFASGGPLRFRRAIGYRD--LFYLDDKDVEFKDVI-EAPLPRAPLDTSIVCHW 124
+E +YG +F + + ++D ++YLDDK+V ++I +P P TS+ HW
Sbjct: 95 CRLESIYGINGTEADQF-KCVTFKDSKIYYLDDKEVNLHNLIMNDEIPNDPGRTSVRAHW 153
Query: 125 LAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITEL 184
L I G + +N+ +N T +K ++ + S+E QL +
Sbjct: 154 LPISG---SLKQNSINWQQLNTANNT----------YLKAVLQGLKSQEPQLVLTIMN-- 198
Query: 185 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQ 244
+L T+S + ++PY Y++ + +++ + ++ + ++++
Sbjct: 199 ---------------NLRTNSHVTVILPYVLYYLISSIK----SHTHVARCLQSIQSIIE 239
Query: 245 NPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQ 304
N + + PYL QL+ ++TC + +R+A N W LR+ +A L+A + + Y +
Sbjct: 240 NKSLTLLPYLVQLVSVLMTCTLD---DHRMA-NSWHLRNKSAMLLALLAREYKKSSPNVC 295
Query: 305 TRLTKTLLNALLDPKRALTQHYGAVQGLAALG 336
+T L L + HYGA+ L G
Sbjct: 296 NNITNKLREVLASNDKPRFSHYGAIVTLTYFG 327
>gi|291244772|ref|XP_002742271.1| PREDICTED: TBP-associated factor 6-like [Saccoglossus kowalevskii]
Length = 154
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 82/120 (68%), Gaps = 1/120 (0%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
SI+ E+V+VI++S+GI + S DA LA DV YR++E+ QE+IK MRH +R L+T D
Sbjct: 19 SIMTTESVKVISESVGIDSLSDDALTLLADDVTYRLKEMTQESIKFMRHGKRRRLSTTDF 78
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
D ALK+RNVEP+YGF + + FR A G R+L + ++K+ + D+I P+ P+D S+
Sbjct: 79 DHALKVRNVEPLYGFQASEFIPFRFASGGGRELHFNEEKETDLNDIINTARPKIPVDVSL 138
>gi|62083798|gb|AAX62619.1| putative TBP-associated protein [Trichomonas vaginalis]
Length = 438
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 176/397 (44%), Gaps = 11/397 (2%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAAL--ALAPDVEYRIREIMQEAIKCMRHSRRTTLTT 58
M+ +ET+ I +S+G+ +A++ L + RI I+ A++ +R LT
Sbjct: 1 MAKAKQETLRTIFKSLGLG-VDNEASIMYTLVDHAQTRILNILGNALQITHKCKRNRLTV 59
Query: 59 DDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+D++ AL+ ++P++G++S G L DD V+ LP PL T
Sbjct: 60 NDINIALESLRIQPLFGYSSQIEPELVDVNGDNKLLAYDDSFVQIDQYGRRELPAYPLAT 119
Query: 119 SIVCHWLAIEGV----QPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSREL 174
S W+A+ GV Q V +N A Q + KH S
Sbjct: 120 SYDIDWIALNGVGHKNQEVTEDNNENNENAQLKQANQYRQFIQDSDAFVVSNKHQFSFTH 179
Query: 175 QLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFA 234
Q +F + + +S ++ + + L+ + LVPY+ F + N ++ L++
Sbjct: 180 QKFFRESRDALLS-TNQLKKELMFYKLSRLDCIQMLVPYYVRFTLVQFRNHSNEWNTLYS 238
Query: 235 LMRVVWNLLQNPHIQ-IEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAIC 293
+ L+QNP ++ IE YL + ++ L+ + +R+ A+ + IC
Sbjct: 239 SLCTARALVQNPELKNIERYLQSFITIALSFLLNSDILRTNVVGLIRIRELAAEYLVVIC 298
Query: 294 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 353
+ + Y +Q +T L++ L+DP R++++ YGA GL A G + +LP++ +
Sbjct: 299 DKISNGYPMVQPHITSQLISVLVDPARSVSEKYGAFCGLNAFGSETIARFVLPHIDVIVK 358
Query: 354 LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYD 390
L + + +N R A Y AL+ A G C+Y+
Sbjct: 359 DLVKGPMRDGDRN--IRIVAATYYDALVNAVGLCLYN 393
>gi|198433140|ref|XP_002128118.1| PREDICTED: similar to MGC80584 protein [Ciona intestinalis]
Length = 515
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 184/395 (46%), Gaps = 35/395 (8%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
++ +E++++ A+S+GI++ LA DV YR+RE++ ++ +RH+RR L +D
Sbjct: 13 FAVFSQESIQIYAESLGITDLPDAVKQTLAEDVSYRLRELVSKSTTFLRHARRKRLLAND 72
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120
V+ AL + ++G S L F++ D+ D + +D I + P +S
Sbjct: 73 VNRALYWSDTPAIHG--SSNTLDFKQVA---DVHVPIDPTINLRDEI-FDIELRPASSS- 125
Query: 121 VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDK 180
+ V + P+Q + + ++EQ+ E++L + + Y+
Sbjct: 126 -----TLSSVDVSCDKEEPMQ--LSEQSELDSEQE----TEVRLQPN---TDQFTKYYST 171
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV--ADEVSRGLNNYSLLFALMRV 238
+ E ++ + V F + L L ++ + P VPYF F+ A VS L+ S + M+
Sbjct: 172 LVESLLTDNKPV-FCEMLTDLRSNPRVAPCVPYFVTFLTKASLVSHDLDKLSWMLYTMKA 230
Query: 239 VWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRY 296
+L NP++ + YL+ L+ S + C++ N L D HW LRD+ A+++ I +Y
Sbjct: 231 ---MLMNPNLSLVDYLNPLLSSAMYCVLEPLAASINPLND-HWLLRDYGARIITQIVHQY 286
Query: 297 GHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 356
+ + N L DP + L YGA+ + LG VR +LLP L +++
Sbjct: 287 PQKTEEMLGSVKVATRNVLSDPTKPLCSQYGALAVIYYLGEEPVRTVLLPMLTKL--VVD 344
Query: 357 PEMLLEKQKNEVKRH---EAWRVYGALLQAAGQCI 388
M + ++ H +A +V GA+ +C
Sbjct: 345 HIMPITNDRSLTSAHMKEDAQKVLGAVCHCLRRCF 379
>gi|123479321|ref|XP_001322819.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121905672|gb|EAY10596.1| hypothetical protein TVAG_281960 [Trichomonas vaginalis G3]
Length = 438
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 176/397 (44%), Gaps = 11/397 (2%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAAL--ALAPDVEYRIREIMQEAIKCMRHSRRTTLTT 58
M+ +ET+ I +S+G+ +A++ L + RI I+ A++ +R LT
Sbjct: 1 MAKAKQETLRTIFKSLGLG-VDNEASIMYTLVDHAQTRILNILGNALQITHKCKRNRLTV 59
Query: 59 DDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDT 118
+D++ AL+ ++P++G++S G L DD V+ LP PL T
Sbjct: 60 NDINIALESLRIQPLFGYSSQIEPELVDVNGDNKLLAYDDSFVQIDQYGRRELPAYPLAT 119
Query: 119 SIVCHWLAIEGV----QPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSREL 174
S W+A+ GV Q V +N A Q + KH S
Sbjct: 120 SYDIDWIALNGVGHKNQEVTEDNNENNENAQLKQANQYRQFIQDSDAFVVSNKHQFSFTH 179
Query: 175 QLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFA 234
Q +F + + +S ++ + + L+ + LVPY+ F + N ++ L++
Sbjct: 180 QKFFRESRDALLS-TNQLKKELMFYKLSRLDCIQMLVPYYVRFTLVQFRDHSNEWNTLYS 238
Query: 235 LMRVVWNLLQNPHIQ-IEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAIC 293
+ L+QNP ++ IE YL + ++ L+ + +R+ A+ + IC
Sbjct: 239 SLCTARALVQNPELKNIERYLQSFITIALSFLLNPDILRTNVVGLIRIRELAAEYLVVIC 298
Query: 294 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 353
+ + Y +Q +T L++ L+DP R++++ YGA GL A G + +LP++ +
Sbjct: 299 DKISNGYPMVQPHITSQLISVLVDPARSVSEKYGAFCGLNAFGSETIARFVLPHIDVIVK 358
Query: 354 LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYD 390
L + + +N R A Y AL+ A G C+Y+
Sbjct: 359 DLVKGPMRDGDRN--IRIVAATYYDALVNAVGLCLYN 393
>gi|402582574|gb|EJW76519.1| hypothetical protein WUBG_12569 [Wuchereria bancrofti]
Length = 195
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 29/189 (15%)
Query: 91 RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC---------HWLAIEGVQPVIPEN-AP- 139
RDLF DD+D+E V+ AP + PL+T+I C HWL I+GVQP +PEN AP
Sbjct: 3 RDLFVTDDRDIEITPVVNAPAAKLPLETNIKCKYKNNLVLAHWLVIDGVQPAVPENPAPV 62
Query: 140 VQAIAAPSNGTNNEQKD-GLP--------------VEIKLPVKHILSRELQLYFDKITEL 184
VQ AA T D GL V+IK H LS E Q++F +ITE
Sbjct: 63 VQKEAAVVVATEKAAVDTGLSILSKAHRGLRQTEQVQIKTTSTHALSVEQQVFFKEITE- 121
Query: 185 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNL 242
A+ SD +AL SL TD+GL L+P F+ + + V + +N ++L LMR++ +L
Sbjct: 122 AIMGSDDTRRTEALYSLQTDAGLQQLLPRFSVVIVEGVRCNIVQHNLAILIYLMRMIQSL 181
Query: 243 LQNPHIQIE 251
NP + +E
Sbjct: 182 ANNPALSLE 190
>gi|195391944|ref|XP_002054619.1| GJ24553 [Drosophila virilis]
gi|194152705|gb|EDW68139.1| GJ24553 [Drosophila virilis]
Length = 397
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 123/219 (56%), Gaps = 6/219 (2%)
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--N 227
LS+E Q +F ITE + S+ + AL L++DS L P++P + F+ + V +
Sbjct: 124 LSKEQQEFFVLITETCMGISEPTR-RDALQRLSSDSSLQPMLPKLSLFIGEAVKVNVVQQ 182
Query: 228 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-DNHWELRDFTA 286
N++LL LMR+V +LL NP+++++ YLH +P+V++C V++++ A NHW LR++ A
Sbjct: 183 NFALLLYLMRMVHSLLVNPNLKLQNYLHLFIPAVLSCTVSRQVCAFPAVQNHWALREYAA 242
Query: 287 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 346
++A + K + N++ R+ L +LT YG++ GL+ +G VR ++P
Sbjct: 243 NIMAELVKTFDSDDNSIMPRVINIYKAGL--QSSSLTTIYGSLIGLSKMGKYAVRGCVIP 300
Query: 347 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAG 385
+ +++E + E+ N++ + A + LL+ +
Sbjct: 301 QIRAISAIIEMHLTKEESDNDLNKQAAIYIRHRLLKMSA 339
>gi|195568452|ref|XP_002102230.1| GD19609 [Drosophila simulans]
gi|194198157|gb|EDX11733.1| GD19609 [Drosophila simulans]
Length = 570
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 177/358 (49%), Gaps = 29/358 (8%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P+ + S G + A L+ +V+ I+ ++ EA K MR R L +
Sbjct: 12 SLSPRSISAIFFHSTG-QRLDDEVAQWLSFNVKEDIKNLLNEAGKYMRRIRDRRLQLSHI 70
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
A+++ + + + F R + D K+V K V EA + A D +V
Sbjct: 71 QHAVRMHD-DLCHDI-------FFRLVHCDDCTMRPAKNV-LKTVREA-VTTAKGDEPLV 120
Query: 122 CHWLAIEGVQPVIPENAPVQAIAAP---SNGTNNEQKDGLPVEIKLPVKHILSRELQLYF 178
E VQ + E+ ++ P S EQ V +K ++ LS E Q +F
Sbjct: 121 ---FCPESVQESVQESVSEISLEPPPLHSGWMKVEQ-----VLLKPCKRYPLSMEQQNFF 172
Query: 179 DKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALM 236
+ +TE V +S + AL +L+TD L L+P T F+AD V+ + N SLL LM
Sbjct: 173 ELVTEACVGDLESRRVR-ALKALSTDPSLEDLLPRLTKFIADAVAINMAQQNLSLLLYLM 231
Query: 237 RVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAICKR 295
R+V LL+N + YLH L+P+V++CL+AK++ + ++HW LR+++ +++ I ++
Sbjct: 232 RMVQALLKNQRFSLLQYLHLLLPAVLSCLLAKQVCASPDLEDHWALREYSGNIISQIVRQ 291
Query: 296 YGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 353
+ N + RL AL K++LT +GAV GL +G +VVR +LP L YLS
Sbjct: 292 FDAAGNGILPRLIGVYKKAL--SKKSLTTVFGAVLGLGKMGSHVVRACILPQLK-YLS 346
>gi|42495560|gb|AAS17941.1| TATA binding protein associated factor 6b isoform 4 [Arabidopsis
thaliana]
Length = 195
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 57/69 (82%)
Query: 3 IVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVD 62
+V KE++EVIAQSIG+S S D + ALAPDVEYR+RE+MQEAIKCMRH+RRTTL DVD
Sbjct: 1 MVTKESIEVIAQSIGLSTLSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHDVD 60
Query: 63 EALKLRNVE 71
AL RN+E
Sbjct: 61 SALHFRNLE 69
>gi|123432184|ref|XP_001308370.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890047|gb|EAX95440.1| hypothetical protein TVAG_243280 [Trichomonas vaginalis G3]
Length = 438
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 178/402 (44%), Gaps = 23/402 (5%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEY---RIREIMQEAIKCMRHSRRTTLT 57
M+ +ET+ +I +S+G+ N +A+L + P VE+ I +++ A++ +RT LT
Sbjct: 1 MTKAKQETLRLIFKSLGL-NVDNEASL-MYPLVEHAQTSILKVLGNALQIAHRCKRTKLT 58
Query: 58 TDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLD 117
D++ AL+ +EP++G++S G L DD + + LP PL
Sbjct: 59 VADINVALESLRLEPLFGYSSQQEPNVVDVNGDNKLLVYDDSFAQLEQYARRELPAYPLA 118
Query: 118 TSIVCHWLAIEGVQPVIPENAPV--QAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQ 175
T W+A+ G+ E + + + N +N+Q+ V +I
Sbjct: 119 THFDVVWIALNGIGHENLETMELSNEKLENTLNKQHNQQRQKTQDSDYFVVSNIHQ---- 174
Query: 176 LYFDKITELAVSRSDSVLFKQALV-------SLATDSGLHPLVPYFTYFVADEVSRGLNN 228
F + + S S L +V L+ + LVPY+ F + N+
Sbjct: 175 --FSYVNQKFFGASGSFLMSSKIVDRELMFSKLSVLDCIQTLVPYYIRFSLVQFKDHPND 232
Query: 229 YSLLFALMRVVWNLLQNPHIQ-IEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 287
+ L++ + V L+QNP ++ I Y+ + ++ L+ + A +R+ A+
Sbjct: 233 WDTLYSSLCTVRALVQNPKLEYINCYIQSFITIALSFLLNPEILRTNAIALVRMRELAAE 292
Query: 288 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 347
+ IC + + Y +Q +T L++ L++ ++++ +GA GL A GP + +LP+
Sbjct: 293 FLLVICDKLSNTYPMVQPHITAQLISVLIEHDYSVSEKFGAFCGLNAFGPQTIAKFVLPH 352
Query: 348 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIY 389
+ + L + + +N R A Y L+ A G C+Y
Sbjct: 353 IEMIIKDLVSGPMKDGDRN--VRMIAASFYDTLVNAVGLCLY 392
>gi|195343681|ref|XP_002038424.1| GM10624 [Drosophila sechellia]
gi|194133445|gb|EDW54961.1| GM10624 [Drosophila sechellia]
Length = 588
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 178/360 (49%), Gaps = 33/360 (9%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P+ + S G + A L+ +V+ I+ ++ EA K MR R L +
Sbjct: 30 SLSPRSISAIFFHSTG-QLLDDEVAQWLSHNVKEDIKNLLNEAGKYMRRIRDRRLQLSHI 88
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
A+++ + + + F R + D K+V K V EA + A D +V
Sbjct: 89 QHAVRMHD-DLCHDI-------FFRLVHCDDCTMRPAKNV-LKTVREA-VTTAKGDEHLV 138
Query: 122 CHWLAIEGVQPVIPENAPVQAIAAP---SNGTNNEQKDGLPVEIKLPVKHILSRELQLYF 178
E VQ + E+ ++ P S EQ V +K ++ LS E Q +F
Sbjct: 139 S---CSESVQESVQESVSEISLEPPPVHSGWMKVEQ-----VLLKPCKRYPLSMEQQNFF 190
Query: 179 DKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN----NYSLLFA 234
+ +TE V +S + AL +L+TD L L+P T F+AD V G+N N SLL
Sbjct: 191 ELVTEACVGDLESRRVR-ALQALSTDPSLEDLLPRLTKFIADAV--GINMAQQNLSLLLY 247
Query: 235 LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAIC 293
LMR+V LL+N + YLH L+P+V++CL+AK++ + ++HW LR+++ +++ +
Sbjct: 248 LMRMVQALLKNQRFSLLQYLHLLLPAVLSCLLAKQVCASPDLEDHWALREYSGNIISQVV 307
Query: 294 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 353
+++ N + RL AL K++LT +GAV GL +G +VVR +LP L YLS
Sbjct: 308 RQFDAAGNGILPRLIGVYKKAL--SKKSLTTVFGAVLGLGKMGSHVVRACILPQL-KYLS 364
>gi|194746737|ref|XP_001955833.1| GF16042 [Drosophila ananassae]
gi|190628870|gb|EDV44394.1| GF16042 [Drosophila ananassae]
Length = 539
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 122/227 (53%), Gaps = 15/227 (6%)
Query: 167 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 226
++ L+RE Q +++ ITE +V S+S + AL +++ D + L+P + F+AD + +
Sbjct: 160 RYPLTREQQCFYEMITENSVGLSESRRHR-ALHTMSLDPSVEVLLPRLSRFIADSTAVNI 218
Query: 227 --NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDF 284
N +L MR+V LL N I + YLH ++P+V++CL+AK L +R ++ HW LR++
Sbjct: 219 VQRNMPMLLYTMRMVRALLGNSRISLYKYLHLILPAVLSCLLAKEL-SRGSEEHWALREY 277
Query: 285 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
+ ++A I + + +++ +R+ AL + LT +GAV G +G VR +
Sbjct: 278 SGNIMAEIVRHFKSTDSSILSRVVSIYKQALT--MKPLTTVFGAVIGFGKMGNYAVRACI 335
Query: 345 LPNLGPYLSLLEPEML---------LEKQKNEVKRHEAWRVYGALLQ 382
+P + +EP + L+KQ ++ RH +V +L+
Sbjct: 336 VPQIAYLAERIEPHLATSADNASSKLDKQASKYIRHRLVKVCTPVLK 382
>gi|119594502|gb|EAW74096.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa, isoform CRA_c [Homo
sapiens]
Length = 509
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 114/218 (52%), Gaps = 9/218 (4%)
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLN 227
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ VS L
Sbjct: 40 LTDDLLKYYHQVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSGVKSVSHDLE 98
Query: 228 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFT 285
L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 99 Q---LHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGA 154
Query: 286 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 345
A L++ I +G + + L + +L L DP R L HYGAV GL ALG V +L
Sbjct: 155 ALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLY 214
Query: 346 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 215 PHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 252
>gi|324506090|gb|ADY42608.1| Transcription initiation factor TFIID subunit 6 [Ascaris suum]
Length = 346
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 151/333 (45%), Gaps = 42/333 (12%)
Query: 92 DLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAI----- 143
++F +D +V+ + + P+ PL I HWL +G Q +P+N P + +
Sbjct: 5 EVFIAEDAEVDMAAIANSKPPKPPLCPMIRAHWLVYDGEQIYVPQNPIIVPKRIVRLEEH 64
Query: 144 -----AAPSNGTN---NEQKDGLPVEIKLPVK---------------HILSRELQLYFDK 180
A P++ + G + +L ++ H LS E Q +F
Sbjct: 65 EERFNAIPTSSRRESLTQMSSGASIAYRLAMRSTRKAERIYVKPSSSHQLSLEQQRFFRD 124
Query: 181 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL--LFALMRV 238
+ E V D +AL SL D+GL L+P + ++A V + SL L ++
Sbjct: 125 VLEACVGLDDKRRV-EALESLQMDTGLQSLLPNISRWLAQGVYANIIQRSLAMLIYIVHA 183
Query: 239 VWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYG 297
LL N + I P LH+++PS+++C+++++L +R DNHW LRDF +K + + + +G
Sbjct: 184 HAALLHNRSLDIHPVLHEMVPSLLSCMISRQLCSRPDIDNHWTLRDFASKCLVQLVREHG 243
Query: 298 HVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEP 357
V +T Q R+ + L ++ + YGA L L + R P+ L ++P
Sbjct: 244 -VCDT-QKRVQQALRYCFMNSSSSANMRYGAFHALFDLSASAERAAFYPHFIEVLHSVDP 301
Query: 358 EMLLEKQKNEVKRHEAWRVYGALL---QAAGQC 387
+ +R ++ ++Y L+ QA +C
Sbjct: 302 NVTASMPNQ--RRIDSEKLYALLVRYEQAMSKC 332
>gi|195044977|ref|XP_001991913.1| GH17238 [Drosophila grimshawi]
gi|193901671|gb|EDW00538.1| GH17238 [Drosophila grimshawi]
Length = 735
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 5/202 (2%)
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
V K + H L +E +F ITE +D+ + AL L D+ + ++P F+A
Sbjct: 439 VRFKSVMGHHLKKEQHQFFIHITESCTGPNDTAR-RNALKVLREDASICRILPELCRFIA 497
Query: 220 DEVSRG--LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN 277
D V+ L N +LL LM++V L N +++I+P+LH L+P+VVTC VA +L
Sbjct: 498 DAVNLNVVLKNLTLLSYLMQMVAILHCNANLRIQPFLHLLIPAVVTCQVANKLSTAKDKY 557
Query: 278 HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP 337
HW+LR++ +++ + ++ + N + RL + L K +LT YG++ GL ALG
Sbjct: 558 HWQLREYACEIMGQLINKFANSTNRMVPRLMNVYKSGL--EKSSLTTIYGSLIGLQALGD 615
Query: 338 NVVRLLLLPNLGPYLSLLEPEM 359
+ ++P + L+EP +
Sbjct: 616 TAIYGCVIPKIRDISKLIEPHL 637
>gi|119936348|gb|ABM06111.1| TAF6-like RNA polymerase II [Bos taurus]
Length = 291
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 194 FKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVWNLLQNPHIQIE 251
K AL L T+S + L+PYF Y V+ VS L L L++V +L++NPH+ +
Sbjct: 1 MKIALHDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQ---LHRLLQVARSLVRNPHLCLV 57
Query: 252 PYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTK 309
PY+ L+ SV+ C++ N L D HW LRD A L++ I YG + N L ++
Sbjct: 58 PYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTYGDLVNGLYQQILL 116
Query: 310 TLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVK 369
+L L DP R L HYGAV GL ALG V +L P+L Y + L+ + N
Sbjct: 117 SLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQV 176
Query: 370 RHEAWRVYGALLQA 383
+ + +VYGA+L A
Sbjct: 177 KADGHKVYGAILVA 190
>gi|25013131|gb|AAN71679.1| SD16013p, partial [Drosophila melanogaster]
Length = 566
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 175/360 (48%), Gaps = 33/360 (9%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P+ + S G+ + A L+ +V+ I ++ EA K MR R L +
Sbjct: 34 SLSPRSLSAIFFHSTGL-HLDDGVAQWLSINVKEDITNLLNEAGKYMRRIRDRRLQLSHI 92
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
A+++ + + Y F R + D + V K V EA + D +V
Sbjct: 93 QHAVRMHD-DLCYDI-------FFRLVHCDDCKMPPSQKV-LKTVSEA-VTAEKKDELLV 142
Query: 122 CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE---IKLPVKHILSRELQLYF 178
+ E VQ +PE P ++ P T L VE +K ++ LS E Q +F
Sbjct: 143 SY---PESVQESVPEPVPETSLEPPPMHTG-----WLKVEQVLLKPSKRYPLSMEQQNFF 194
Query: 179 DKITELAVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFA 234
+ +TE V S VL AL +++TD L L+P T F+AD V+ + N LL
Sbjct: 195 EFVTEACVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLY 251
Query: 235 LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAIC 293
LMR+V LL N + YLH L+P+V++CL+AK++ + +++HW LR+++ ++A I
Sbjct: 252 LMRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHIV 311
Query: 294 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 353
+++ N + R+ ALL K+ LT +GAV GL +G + VR +LP L YLS
Sbjct: 312 RQFDAADNGILPRVIGVYNKALL--KKPLTTVFGAVIGLGKMGNHAVRACILPQLK-YLS 368
>gi|363987306|gb|AEW43895.1| FI17401p1 [Drosophila melanogaster]
Length = 594
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 175/360 (48%), Gaps = 33/360 (9%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P+ + S G+ + A L+ +V+ I ++ EA K MR R L +
Sbjct: 35 SLSPRSLSAIFFHSTGL-HLDDGVAQWLSINVKEDITNLLNEAGKYMRRIRDRRLQLSHI 93
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
A+++ + + Y F R + D + V K V EA + D +V
Sbjct: 94 QHAVRMHD-DLCYDI-------FFRLVHCDDCKMPPSQKV-LKTVREA-VTAEKKDELLV 143
Query: 122 CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE---IKLPVKHILSRELQLYF 178
+ E VQ +PE P ++ P T L VE +K ++ LS E Q +F
Sbjct: 144 SY---PESVQESVPEPVPETSLEPPPMHTG-----WLKVEQVLLKPSKRYPLSMEQQNFF 195
Query: 179 DKITELAVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFA 234
+ +TE V S VL AL +++TD L L+P T F+AD V+ + N LL
Sbjct: 196 ELVTEACVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLY 252
Query: 235 LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAIC 293
LMR+V LL N + YLH L+P+V++CL+AK++ + +++HW LR+++ ++A I
Sbjct: 253 LMRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHIV 312
Query: 294 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 353
+++ N + R+ ALL K+ LT +GAV GL +G + VR +LP L YLS
Sbjct: 313 RQFDAADNGILPRVIGVYNKALL--KKPLTTVFGAVIGLGKMGNHAVRACILPQLK-YLS 369
>gi|195109658|ref|XP_001999400.1| GI24488 [Drosophila mojavensis]
gi|193915994|gb|EDW14861.1| GI24488 [Drosophila mojavensis]
Length = 440
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 161/341 (47%), Gaps = 35/341 (10%)
Query: 28 ALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEP---VYGFASGGPLRF 84
A+A +V I +I+ EA K R +R + +T D + AL+ N+ +AS P+
Sbjct: 47 AVAQNVRKDISQIVAEAAKYARRTRSSKITIDHLLFALEEHNISLDLLHVNYASPDPIE- 105
Query: 85 RRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIP--ENAPVQA 142
DK + + ++ L RA + E P P NAP++
Sbjct: 106 ------------TDKPISKPPIKKSSLDRASRKDA---KRRKREREAPFEPYDSNAPLE- 149
Query: 143 IAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLA 202
N ++ L + P LS+E Q +F ITE + S+ ++AL SL
Sbjct: 150 ---ERNRWLKREQVLLMSNKRFP----LSKEQQEFFLVITEACMGNSEFAR-REALHSLR 201
Query: 203 TDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 260
TDS L P++ + F+ + +V+ N++LL LMR+V N+L NPH+Q+ YLH L+PS
Sbjct: 202 TDSSLQPMLYRLSLFIGEAVKVNVAQKNFALLIYLMRMVQNVLFNPHLQLHNYLHLLVPS 261
Query: 261 VVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPK 319
V++C V++++ NH R++ ++A + YG+ N + R+ N L
Sbjct: 262 VLSCAVSRQICAFPTVQNHCAAREYATNIMADFIRAYGYPGNDILPRVISVYKNGL--KS 319
Query: 320 RALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 360
L YG++ GL+ +G +R ++P + ++P ++
Sbjct: 320 SILMTIYGSLVGLSKMGRYAIRDCVIPEIRSLSEGIQPYLI 360
>gi|45550693|ref|NP_649547.3| meiosis I arrest, isoform A [Drosophila melanogaster]
gi|221377901|ref|NP_001138010.1| meiosis I arrest, isoform B [Drosophila melanogaster]
gi|45446367|gb|AAF52013.3| meiosis I arrest, isoform A [Drosophila melanogaster]
gi|220903002|gb|ACL83469.1| meiosis I arrest, isoform B [Drosophila melanogaster]
Length = 589
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 175/360 (48%), Gaps = 33/360 (9%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P+ + S G+ + A L+ +V+ I ++ EA K MR R L +
Sbjct: 30 SLSPRSLSAIFFHSTGL-HLDDGVAQWLSINVKEDITNLLNEAGKYMRRIRDRRLQLSHI 88
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
A+++ + + Y F R + D + V K V EA + D +V
Sbjct: 89 QHAVRMHD-DLCYDI-------FFRLVHCDDCKMPPSQKV-LKTVREA-VTAEKKDELLV 138
Query: 122 CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE---IKLPVKHILSRELQLYF 178
+ E VQ +PE P ++ P T L VE +K ++ LS E Q +F
Sbjct: 139 SY---PESVQESVPEPVPETSLEPPPMHTG-----WLKVEQVLLKPSKRYPLSMEQQNFF 190
Query: 179 DKITELAVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFA 234
+ +TE V S VL AL +++TD L L+P T F+AD V+ + N LL
Sbjct: 191 ELVTEACVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLY 247
Query: 235 LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAIC 293
LMR+V LL N + YLH L+P+V++CL+AK++ + +++HW LR+++ ++A I
Sbjct: 248 LMRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHIV 307
Query: 294 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 353
+++ N + R+ ALL K+ LT +GAV GL +G + VR +LP L YLS
Sbjct: 308 RQFDAADNGILPRVIGVYNKALL--KKPLTTVFGAVIGLGKMGNHAVRACILPQLK-YLS 364
>gi|154416709|ref|XP_001581376.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915603|gb|EAY20390.1| hypothetical protein TVAG_110020 [Trichomonas vaginalis G3]
Length = 434
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 179/387 (46%), Gaps = 44/387 (11%)
Query: 50 HSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDD--------KDV 101
S L+ +DV EA R P G+ R R+AI Y + + D K +
Sbjct: 53 QSNHKKLSVEDVSEAFNARGFNPFLGY------RNRKAIKYETVGQVGDTVISIPVDKQL 106
Query: 102 EFKDVIEAPLPRAPLDTSIVCHWLA-IEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPV 160
+ +++ PL P + HWLA I G QP+IPEN + P + NN P
Sbjct: 107 DLSEIVNTPLKETPTEKFFSFHWLAVIRGQQPLIPEN--LNDTTVPGSTHNNIY--APPP 162
Query: 161 EIKLPVKHI--------LSRELQLYFDKITELAVS-RSDSVLFKQALVSLATDSGLHPLV 211
++KL + + +S+EL ++ + V+ R L K+ L +D+ + PL+
Sbjct: 163 QMKLSDQSVQITSTRNEVSQELYTHYYHLIAPNVNPRKKIPLLKE----LQSDAAIIPLL 218
Query: 212 PYFTYFVADEVSRGLNNYSLLFA-LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 270
PYF ++++ S +N + F + + L+ N +++++ YL Q++ +T L+
Sbjct: 219 PYFFHYLSSHYSSNNSNITAAFDDRINLARALILNDNLKLDMYLIQIINLSITSLLMS-- 276
Query: 271 GNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQ-HYGAV 329
N + LR+ +A+L++ + +Y +Y TL+TR+T L+ +D K Q GA
Sbjct: 277 FNDPVVESFSLRENSAELLSLVINKYSQIYPTLRTRITDHLVKTFIDRKNGNFQVKLGAA 336
Query: 330 QGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCI- 388
GL+ +G +VVR +++P ++ L+ + L + K + ++ LL+ G
Sbjct: 337 IGLSVIGSHVVRKVIIPQFPRIMNSLDEQKLPAETKIQF-----FKFKSILLKICGDSFH 391
Query: 389 YDRLKIFPPLSS--LPARSVWKTNGIV 413
YD + S LPA + N ++
Sbjct: 392 YDTEEAIKQTGSPNLPAETAQMYNNLI 418
>gi|211938737|gb|ABK30921.2| RT01020p [Drosophila melanogaster]
Length = 594
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 174/360 (48%), Gaps = 33/360 (9%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P+ + S G+ + A L+ +V+ I ++ EA K MR R L +
Sbjct: 35 SLSPRSLSAIFFHSTGL-HLDDGVAQWLSINVKEDITNLLNEAGKYMRRIRDRRLQLSHI 93
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
A+++ + + Y F R + D + V K V EA + D +V
Sbjct: 94 QHAVRMHD-DLCYDI-------FFRLVHCDDCKMPPSQKV-LKTVREA-VTAEKKDELLV 143
Query: 122 CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE---IKLPVKHILSRELQLYF 178
+ E VQ +PE P + P T L VE +K ++ LS E Q +F
Sbjct: 144 SY---PESVQESVPEPVPETPLEPPPMHTG-----WLKVEQVLLKPSKRYPLSMEQQNFF 195
Query: 179 DKITELAVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFA 234
+ +TE V S VL AL +++TD L L+P T F+AD V+ + N LL
Sbjct: 196 ELVTEACVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLY 252
Query: 235 LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAIC 293
LMR+V LL N + YLH L+P+V++CL+AK++ + +++HW LR+++ ++A I
Sbjct: 253 LMRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHIV 312
Query: 294 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 353
+++ N + R+ ALL K+ LT +GAV GL +G + VR +LP L YLS
Sbjct: 313 RQFDAADNGILPRVIGVYNKALL--KKPLTTVFGAVIGLGKMGNHAVRACILPQLK-YLS 369
>gi|54306296|gb|AAV33343.1| TAF6-like protein [Drosophila melanogaster]
Length = 593
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 176/361 (48%), Gaps = 31/361 (8%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P+ + S G+ + A L+ +V+ I ++ EA K MR R L +
Sbjct: 30 SLSPRSLSAIFFHSTGL-HLDDGVAQWLSINVKEDITNLLNEAGKYMRRIRDRRLQLSHI 88
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
A+++ + + Y F R + D + V K V EA + D +V
Sbjct: 89 QHAVRMHD-DLCYDI-------FFRLVHCDDCKMPPSQKV-LKTVREA-VTAEKKDELLV 138
Query: 122 CHWLAI-EGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE---IKLPVKHILSRELQLY 177
+ ++ E VQ +PE P ++ P T L VE +K ++ LS E Q +
Sbjct: 139 SYPESVQESVQESVPEPVPETSLEPPPMHTG-----WLKVEQVLLKPSKRYPLSMEQQNF 193
Query: 178 FDKITELAVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLF 233
F+ +TE V S VL AL +++TD L L+P T F+AD V+ + N LL
Sbjct: 194 FELVTEACVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLL 250
Query: 234 ALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAI 292
LMR+V LL N + YLH L+P+V++CL+AK++ + +++HW LR+++ ++A I
Sbjct: 251 YLMRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHI 310
Query: 293 CKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYL 352
+++ N + R+ ALL K+ LT +GAV GL +G + V +LP L YL
Sbjct: 311 VRQFDAADNGILPRVIGVYNKALL--KKPLTTVFGAVIGLGKMGNHAVLACILPQLK-YL 367
Query: 353 S 353
S
Sbjct: 368 S 368
>gi|238503231|ref|XP_002382849.1| TATA binding protein associated factor, putative [Aspergillus
flavus NRRL3357]
gi|220691659|gb|EED48007.1| TATA binding protein associated factor, putative [Aspergillus
flavus NRRL3357]
Length = 132
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS+ + + +A+S+GI N + D LA DVEYRI ++++EA+K MRHSRRT LTT D
Sbjct: 1 MSVWNPDNIRDVAESVGIVNLNNDVTENLARDVEYRIAQVLEEALKFMRHSRRTLLTTQD 60
Query: 61 VDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKD 100
+ +AL++ +VEP+YG+ S PLRF A +G + LFY++D++
Sbjct: 61 IAQALRVLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEE 102
>gi|195451123|ref|XP_002072777.1| GK13782 [Drosophila willistoni]
gi|194168862|gb|EDW83763.1| GK13782 [Drosophila willistoni]
Length = 469
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 165 PVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSR 224
P K ILSRE + IT ++ +S++ ++AL +L D L+ L+P F+++ V+
Sbjct: 55 PRKRILSREQLGLYKLITAASLGKSENKR-RRALQTLTNDPALNDLLPALCLFISNAVNV 113
Query: 225 GLN--NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELR 282
+ N S L LMR+V L+ N + ++ LHQL+P+V+TCL+ R + +HW LR
Sbjct: 114 NVVKLNMSKLLYLMRMVRALVANSSLCLQRCLHQLIPAVLTCLLT-RQDDPFPADHWALR 172
Query: 283 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 342
+++ ++A I + + N + R+ AL K LT YGAV GL LG VVR
Sbjct: 173 EYSGNIIAEIVWHFDNPSNGILPRVIGIYNQAL--QKLPLTTVYGAVIGLGKLGNYVVRA 230
Query: 343 LLLPNLGPYLSLLEPEM 359
L+P + S +EP +
Sbjct: 231 YLVPQIAFISSRIEPHL 247
>gi|341877986|gb|EGT33921.1| hypothetical protein CAEBREN_26402 [Caenorhabditis brenneri]
Length = 829
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 163/383 (42%), Gaps = 65/383 (16%)
Query: 21 FSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGG 80
+ +AA + +R I++ A K R +T DVD A+ ++
Sbjct: 116 LTQEAANTIGGCTRLILRTIIENAKKTACQENRKRITPSDVDLAISAAQIDNDLTCPVLK 175
Query: 81 PLRFRRAIGYRDLFYLDDKDVEFKDVIEAP----LPRAPLDTSIVC--HWLAIEGVQPVI 134
P D Y K V+ K++I+A + SI+ HWL +EG+QP +
Sbjct: 176 P------TPSTDRMYWGRKSVKRKNIIDATSQDIVSNERFCDSIMIKDHWLVVEGIQPCV 229
Query: 135 PENAPVQAIAAPSNGTNNEQKD----GLPVEIKLPV------KHILSRELQLYFDKITEL 184
PEN + E + G+P +LP+ + S E Q+ + ++T
Sbjct: 230 PENVIPSEVKQKFQEQQEETQRVYGYGVPGLQRLPMPDKRTSTQMYSVEHQVLYAEVTRT 289
Query: 185 AVSRSDSVLFKQALVS-LATDSGLHPLVPYFTYFVADEVSR--GLNNYSLLFALMRVVWN 241
S S L +Q ++ L +D+G+ L F +A+ V G N L L+++ W+
Sbjct: 290 LTS--GSALERQKVLEVLESDTGIQFLAGRFVILIAEGVRLHIGTRNTRGLANLLKLTWS 347
Query: 242 LLQNPHIQIEPYLHQLMPSVVTCLVAKRL-----GNRLA--------------------- 275
L++NPHI++E YL+ L+PS+++C+V+K L +R+A
Sbjct: 348 LMKNPHIRLEKYLYVLVPSLISCVVSKSLVPLVDSSRIASKSTSTTKSTAPVVGTPELTE 407
Query: 276 ----------DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQH 325
+ +++R+ + KL+A + ++Y + L R+ +TL L R
Sbjct: 408 EDRERIIRDMEFEFKIRESSGKLLAELSQQYEN--QNLSVRIIQTLRKVLTGSSRDPAAV 465
Query: 326 YGAVQGLAALGPNVVRLLLLPNL 348
YG + A G + ++LP L
Sbjct: 466 YGVLCTFFAFGNLTITTVVLPKL 488
>gi|395544396|ref|XP_003774096.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L isoform 2
[Sarcophilus harrisii]
Length = 251
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 139/292 (47%), Gaps = 57/292 (19%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESAGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSIVC 122
AL+ NVE V G+ S L R A DL++ +D++V ++ + +P+ +T++
Sbjct: 71 ALRWSNVEAVCGYGSQETLPLRPA-REGDLYFPEDREVNLVELALATNIPKGCPETAVRV 129
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKIT 182
H ++G V P+ + A+++ L+ +L Y+ ++T
Sbjct: 130 HVSYLDGKGNVEPQGSVPSAVSS------------------------LTDDLLKYYQQVT 165
Query: 183 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 242
AV D L K VS ++ L L++V +L
Sbjct: 166 R-AVLGDDPQLMKVKSVS--------------------------HDLEQLHRLLQVARSL 198
Query: 243 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAI 292
L+NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I
Sbjct: 199 LRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHI 249
>gi|341880452|gb|EGT36387.1| hypothetical protein CAEBREN_01937 [Caenorhabditis brenneri]
Length = 829
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 163/383 (42%), Gaps = 65/383 (16%)
Query: 21 FSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGG 80
+ +AA + +R I++ A K R +T DVD A+ ++
Sbjct: 116 LTQEAANTIGGCTRLILRTIIENAKKTACQENRKRITPSDVDLAISAAQIDNDLTCPVLK 175
Query: 81 PLRFRRAIGYRDLFYLDDKDVEFKDVIEAP----LPRAPLDTSIVC--HWLAIEGVQPVI 134
P D Y K V+ K++I+A + SI+ HWL +EG+QP +
Sbjct: 176 P------TPSTDRMYWGRKSVKRKNIIDATSQDIVSNERFCDSIMIKDHWLVVEGIQPCV 229
Query: 135 PENAPVQAIAAPSNGTNNEQKD----GLPVEIKLPV------KHILSRELQLYFDKITEL 184
PEN + E + G+P +LP+ + S E Q+ + ++T
Sbjct: 230 PENVIPSEVKQKFQEQQEETQRVYGYGVPGLQRLPMPDKRTSTQMYSVEHQVLYAEVTRT 289
Query: 185 AVSRSDSVLFKQALVS-LATDSGLHPLVPYFTYFVADEVSR--GLNNYSLLFALMRVVWN 241
S S L +Q ++ L +D+G+ L F +A+ V G N L L+++ W+
Sbjct: 290 LTS--GSALERQKVLEVLESDTGIQFLAGRFVILIAEGVRLHIGTRNIRGLANLLKLTWS 347
Query: 242 LLQNPHIQIEPYLHQLMPSVVTCLVAKRL-----GNRLA--------------------- 275
L++NPHI++E YL+ L+PS+++C+V+K L +R+A
Sbjct: 348 LMKNPHIRLEKYLYVLVPSLISCVVSKSLVPLVDSSRIASKSTSTTKSTAPVVGTPELTE 407
Query: 276 ----------DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQH 325
+ +++R+ + KL+A + ++Y + L R+ +TL L R
Sbjct: 408 EDRERIIRDMEFEFKVRESSGKLLAELSQQYEN--QNLSVRIIQTLRKVLTGSSRDPAAV 465
Query: 326 YGAVQGLAALGPNVVRLLLLPNL 348
YG + A G + ++LP L
Sbjct: 466 YGVLCTFFAFGNLTITTVVLPKL 488
>gi|123975778|ref|XP_001330401.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121896557|gb|EAY01705.1| hypothetical protein TVAG_316930 [Trichomonas vaginalis G3]
Length = 407
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 152/347 (43%), Gaps = 17/347 (4%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK 66
+TV+ IA +GI + A +LA D EYR+ + +Q + +S LTTD ++ L+
Sbjct: 9 KTVKSIADQLGIKIKNDALAESLAQDAEYRVSKFIQPLVNYFENSADKYLTTDHINHILR 68
Query: 67 LRNVEPVYGFASGGPLRFRRAIGYRD-LFY-LDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
++ + P++GF + L +D FY DK VE + I +
Sbjct: 69 VQAIPPIFGFTNKSELELTPPQSTQDTTFYAYIDKKVELSQICNETTQTQNRPREIKTSY 128
Query: 125 LAIEGVQPVIPENAPVQAIAAPSNGTN------NEQKDGLPVEIKLPVKHILSRELQLYF 178
I G I N A+ NG N+ + K ++ L+ +L+ ++
Sbjct: 129 KLING---QIINNMRTSNPASNDNGIKSIFDQFNKSGNTFDPMSKDKEQNELTEDLKSFY 185
Query: 179 DKI-TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMR 237
I +EL+ + ++++ L+ G+ PL+PYF +F +++ L+ + A+ +
Sbjct: 186 TSIVSELSNPVENETVYEE----LSQTGGIQPLIPYFLHFFYFQIASFLDKIEAMKAVGK 241
Query: 238 VVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYG 297
V LL N +QI+ Y H M + CL K + + A +RD A +V+ I R
Sbjct: 242 AVVALLINRSVQIDIYAHSFMK-IGICLATKEVITKCAREDCYIRDIGANIVSLITSRCL 300
Query: 298 HVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
+ + + + ++ YGA+ G+ +LG + + +L
Sbjct: 301 NSFPNADIECFNYFNDIIFSENNSIHVLYGALSGIFSLGNDYIERIL 347
>gi|195501972|ref|XP_002098025.1| GE24166 [Drosophila yakuba]
gi|194184126|gb|EDW97737.1| GE24166 [Drosophila yakuba]
Length = 557
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 113/190 (59%), Gaps = 7/190 (3%)
Query: 167 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 226
++ L++E Q +F+ +TE V SDS ++AL +L TD + L+P T F+AD V+ +
Sbjct: 153 RYPLTKEQQSFFELVTEACVGTSDS-RRQRALQTLTTDPSIEVLLPTLTMFIADAVAINV 211
Query: 227 --NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRD 283
+ ++LF LMR++ +LL N + YLH L+P+V++C++AK++ + +D+HW LR+
Sbjct: 212 KQQDMAMLFYLMRMIRSLLGNHRFSLLQYLHLLLPAVLSCVLAKQVCASPDSDDHWALRE 271
Query: 284 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 343
++ ++ I +++ ++ R+ ALL + LT +GAV GL LG VR
Sbjct: 272 YSGNIMGHIGRQFDAADTSILPRVIGVYKKALL--MKPLTTVFGAVIGLGKLGNRAVRAC 329
Query: 344 LLPNLGPYLS 353
++P L YLS
Sbjct: 330 IVPQL-KYLS 338
>gi|118377997|ref|XP_001022175.1| TATA box binding protein associated factor [Tetrahymena
thermophila]
gi|89303942|gb|EAS01930.1| TATA box binding protein associated factor [Tetrahymena thermophila
SB210]
Length = 522
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 165/365 (45%), Gaps = 32/365 (8%)
Query: 12 IAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRN-V 70
+ + I + + + VE +R +++++IK M+H +R LTT DV+ ALK RN
Sbjct: 13 LLKGFSIDKVDKEISQEICNQVEIELRSLIEDSIKFMKHFKRDKLTTSDVEYALKDRNYY 72
Query: 71 EPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEA---PLPRAPLDTSIVCHWLAI 127
+ ++G+ + F++ Y + D++ + + +EA L R + ++ W++I
Sbjct: 73 DKIFGYDVSEKVSFKKHANY---WIKQDEERDLQSYLEAQVKSLKRQVMQPTVTAWWMSI 129
Query: 128 EGVQPVIPENAPVQ---AIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITEL 184
+G P I EN ++ AI E + IK + +LS E+ +F +IT++
Sbjct: 130 DGKIPPINENKFIKNKAAILKYDELKKEEYSKNFNI-IKDKPRSLLSEEINKFFVEITKV 188
Query: 185 AVSRSDSV----------------LFKQALVSLATDSGLHPLVPY-FTYFVADEVSRGLN 227
+ + K L +L T+SGL L+P+ Y D N
Sbjct: 189 IAETEEQIDNPKLNLPGAPFRETPKLKIILNNLKTNSGLTSLLPFLLNYLYQDYDLENKN 248
Query: 228 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 287
S + ++++ +++ N I IE +LH ++ ++ + A L + + R+ +A+
Sbjct: 249 GVSKKYITLKILHSIILNTGINIEFHLHIIIKILIHFITASVLSTNKCVDEIQFREQSAQ 308
Query: 288 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHY----GAVQGLAALGPNVVRLL 343
++ + R+ Y TL+ + TLL L + +Y G V + N++R L
Sbjct: 309 NLSYLINRFTFKYITLKQNICDTLLGILKETLNQKILNYQVLLGIVMTFSHFESNIIRQL 368
Query: 344 LLPNL 348
+LP +
Sbjct: 369 ILPTI 373
>gi|355752016|gb|EHH56136.1| PCAF-associated factor 65-alpha [Macaca fascicularis]
Length = 412
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 10/191 (5%)
Query: 197 ALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYL 254
AL L T+S + L+PYF Y V+ VS L L L++V +L +NPH+ + PY+
Sbjct: 51 ALQDLQTNSKIGALLPYFVYVVSGVKSVSHDLEQ---LHRLLQVARSLFRNPHLCLGPYV 107
Query: 255 HQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLL 312
L+ SV+ C++ N L D HW LRD A L++ I +G + + L + +L
Sbjct: 108 RCLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIT--HGDLVSGLYQHILLSLQ 164
Query: 313 NALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHE 372
L DP R L HYGAV GL ALG V +L P+L Y + L+ + N + +
Sbjct: 165 KILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKAD 224
Query: 373 AWRVYGALLQA 383
+VYGA+L A
Sbjct: 225 GHKVYGAILVA 235
>gi|194898771|ref|XP_001978941.1| GG10968 [Drosophila erecta]
gi|190650644|gb|EDV47899.1| GG10968 [Drosophila erecta]
Length = 570
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 126/234 (53%), Gaps = 20/234 (8%)
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--N 227
L++E Q +F+ +TE + S+S ++AL +L+TD L L+P F+AD V+ +
Sbjct: 156 LTKEQQSFFELVTEACMGISES-RRQRALQTLSTDPSLEVLLPRLITFIADAVAINVTQQ 214
Query: 228 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTA 286
N SLL LMR+V +L N + YLH L+P+V++CL+AK++ + ++HW LR+++
Sbjct: 215 NLSLLLYLMRMVRAVLGNHRFSLLQYLHLLLPAVLSCLLAKQVCASPDVEDHWALREYSG 274
Query: 287 KLVAAICKRYGHVYNTLQTRLTKTLL-----NALLDPKRALTQHYGAVQGLAALGPNVVR 341
++A I +++ N++ R+ +L ALL + LT +GAV GL +G VR
Sbjct: 275 NIMAHIGRQFNAADNSILPRVIGQVLILVYKKALL--MKPLTTVFGAVIGLGKMGNYAVR 332
Query: 342 LLLLPNLGPYLSLLEPEM---------LLEKQKNEVKRHEAWRVYGALLQAAGQ 386
++P L ++P M L+KQ + RH ++ +L + Q
Sbjct: 333 ACIVPQLKYLSEHIQPHMTASNGSSSSSLDKQAAKYIRHRVVKMCTPVLMSLHQ 386
>gi|170595895|ref|XP_001902561.1| Transcription initiation factor TFIID subunit 6 [Brugia malayi]
gi|158589697|gb|EDP28589.1| Transcription initiation factor TFIID subunit 6, putative [Brugia
malayi]
Length = 158
Score = 88.2 bits (217), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 9 VEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLR 68
V+V+A+S+GI+ S A +A Y ++ + ++A K H RR +T +D+D A L
Sbjct: 44 VKVVAESVGIAGLSDVCASQIAVQTTYAVKMVTEQAKKFAVHGRRKRVTAEDIDSAFALG 103
Query: 69 NVEPVYGFA--SGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC 122
P++GF G P RF ++G RDLF DD+D+E V+ AP + PL+T+I C
Sbjct: 104 GYPPLFGFTVKEGLPFRFAGSMG-RDLFVTDDRDIEITPVVNAPAAKLPLETNIKC 158
>gi|402583132|gb|EJW77076.1| hypothetical protein WUBG_12014 [Wuchereria bancrofti]
Length = 197
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Query: 9 VEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLR 68
V+V+A+S+GI+ S A +A Y ++ + ++A K H RR +T +D+D A +
Sbjct: 81 VKVVAESVGIAGLSDVCASQIAVQTTYAVKMVTEQAKKFAVHGRRKRVTAEDIDSAFTMG 140
Query: 69 NVEPVYGFA--SGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHW 124
P++GF G P RF ++G RDLF DD+D+E V+ AP + PL+T+I C +
Sbjct: 141 GYPPLFGFTVKEGLPFRFAGSMG-RDLFVTDDRDIEITPVVNAPAAKLPLETNIKCKF 197
>gi|223996869|ref|XP_002288108.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977224|gb|EED95551.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 505
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 118/284 (41%), Gaps = 29/284 (10%)
Query: 111 LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLP----------- 159
LP P + + HWLA++GV P++ N +D P
Sbjct: 140 LPPPPTELGMTLHWLAVDGVMPLLRMNDVWNGFGVEGGRKELYSRDVAPLVQLDENDNNN 199
Query: 160 ------VEIKLPVKHILSRELQLYFDKITE-LAVSRSDSVLFKQALVSLATDSGLHPLVP 212
+ I+ +LS ELQLYF KIT L+ S + L + TD G+ LVP
Sbjct: 200 NNPDSSIRIRELQHRLLSEELQLYFSKITTVLSNPNSPPMEVSSILNGIRTDGGIQELVP 259
Query: 213 YFTYFVADEVSRGLNNYSLLFALMRVVWNL----LQNPHIQIEPYLHQLMPSVVTCLVAK 268
+ + FVA + + R + L L N + ++ +LHQL + TC+VAK
Sbjct: 260 FLSRFVASGLMEKKKGGGGGIGMARRLVGLFDAMLDNASLHLDLHLHQLFTPIGTCIVAK 319
Query: 269 RLGN----RLAD-NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT 323
+L + + D H+ LR A + C Y Y T++ R+ K L L R L
Sbjct: 320 KLSSTSTIQYYDPTHYSLRYEAAASLVKACTIYSSQYTTMKPRIIKLLTQQALRIDRPLV 379
Query: 324 QHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNE 367
YG + GL+ G V +LP Y E E LE+ NE
Sbjct: 380 TQYGGIVGLSLFGARAVDAFVLPVARGYWEWWEAE--LERCVNE 421
>gi|17543084|ref|NP_500397.1| Protein TAF-6.2 [Caenorhabditis elegans]
gi|351060543|emb|CCD68234.1| Protein TAF-6.2 [Caenorhabditis elegans]
Length = 814
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 168/386 (43%), Gaps = 67/386 (17%)
Query: 18 ISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFA 77
+ + +T AA ++ +R I+Q A K R L DVD A + ++ Y
Sbjct: 107 LGSLTTAAANSIGACTRLVLRTIIQNAKKSASRENRKRLVPSDVDIACGIAQID--YNLT 164
Query: 78 SGGPLRFRRAIGYRDLFYLDDK--------DVEFKDVIEAPLPRAPLDTSIVCHWLAIEG 129
PL R D Y K D K+++ R I HWL ++G
Sbjct: 165 C--PLL--RPTPSSDRMYWGRKLTKEHYTIDANSKEMVSHE--RFCDSIMIKDHWLVVDG 218
Query: 130 VQPVIPENAPVQAIAAPSNGTNNEQKD----GLPVEIKLPV------KHILSRELQLYFD 179
+QP +PEN + +E + G+P + P+ S E Q+ +
Sbjct: 219 IQPCLPENVIPSEVKRRFQEQQHETQRAHGFGVPGIKREPMPEKRMSTQTFSMEHQVLYS 278
Query: 180 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMR 237
+IT++ S S S+ ++ L ++ TD+G+ L F +A+ + G N L L++
Sbjct: 279 EITKILTSGS-SLQRQKVLETIETDTGIQFLAGRFVILIAEGTRLHIGTRNIRGLANLLK 337
Query: 238 VVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK---------RLGNR--------------- 273
+ W+L++NP+I++E YL+ L+PS+++C+V+K R+G +
Sbjct: 338 LTWSLMKNPNIRLEKYLYVLVPSLISCVVSKNMVPILDVSRVGLKAKPTTVTPLGATPPE 397
Query: 274 -LADN----------HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 322
AD+ ++LR+ + KL+A + +Y ++ L R+ +T L +L +
Sbjct: 398 LTADDRERIIRDLEFEFKLREASGKLLAELSSQYQNL--NLNVRIIQT-LRGVLSGNQDP 454
Query: 323 TQHYGAVQGLAALGPNVVRLLLLPNL 348
YG + L A G + ++LP +
Sbjct: 455 AAIYGVLCTLFAFGNLTINSVVLPKM 480
>gi|123435741|ref|XP_001309034.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890742|gb|EAX96104.1| hypothetical protein TVAG_014960 [Trichomonas vaginalis G3]
Length = 393
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 160/377 (42%), Gaps = 56/377 (14%)
Query: 34 EYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY--- 90
E I+ ++ I R S LT ++V++AL N P+ G+ R R+ I Y
Sbjct: 8 EAFIKNVVSLGINFQRQSHSKKLTVENVNDALVAYNYNPILGY------RNRKGIKYVSV 61
Query: 91 -----RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLA-IEGVQPVIPENAPVQ--- 141
++++ +DK ++ I PLP P++ HW A ++GVQP IPEN Q
Sbjct: 62 GLVDGQEVYIPEDKQIDLNTFINKPLPPTPIEKFFSFHWQACLKGVQPQIPENIAEQTRD 121
Query: 142 AIAAPSNGTNNEQKDGLPVEIKLPVKHILSRE-------LQLYFDKITELAVSRSDSVLF 194
+ +AP ++ + HI+S Y + + S VL
Sbjct: 122 SYSAPITVGQLQKAKMTDQSV-----HIISSRNDVDTDLYNTYMNIFNKSPSSPEVDVLC 176
Query: 195 KQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYL 254
K ++ DS + P++PY + E+S + L +++ L+QN I IE YL
Sbjct: 177 K----NMEKDSAISPILPY----IMHELSSDYTQHQDLILRIKIAEALIQNNFIPIENYL 228
Query: 255 HQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNA 314
L+ +T + N + ++D AK + + ++ + TL+ RL
Sbjct: 229 ISLINLAITGI------NETSCEFIPIKDLAAKFLDNLIIKFTPQFPTLRQRLADHFSTI 282
Query: 315 LLDP-KRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHE- 372
LD + + + G+ L+ +G +V+ ++LP + PE+L + +E
Sbjct: 283 FLDKIQLNIGRKVGSAIALSYIGQEIVKDVILPKI--------PELLARIYQRRTVANEL 334
Query: 373 --AWRVYGALLQAAGQC 387
++ LL+ +G+C
Sbjct: 335 ADISKLKSILLKLSGEC 351
>gi|147812197|emb|CAN72683.1| hypothetical protein VITISV_036813 [Vitis vinifera]
Length = 102
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
Query: 441 VDAVSTSSMPTPMEEDATAATPLDNSDAD-HPSPSSVQIPPDSGSESRSKRDKGDSQAQK 499
+D V T+ + + M+ T P+ ++D D PS SS QIP + SE R ++ GD++A K
Sbjct: 1 MDPVPTNFLSSNMQPPETKG-PVPSTDPDMGPSSSSRQIPHGNISEIRDRKGXGDNRAMK 59
Query: 500 LSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 542
+SA+L Q W+DDL SG L VSL ELFGE IL F+PA EMSL L
Sbjct: 60 MSAVLTQTWRDDLKSGHLPVSLSELFGESILPFVPASEMSLLL 102
>gi|268534188|ref|XP_002632224.1| C. briggsae CBR-TAF-6.1 protein [Caenorhabditis briggsae]
Length = 423
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 128/306 (41%), Gaps = 54/306 (17%)
Query: 37 IREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPL--------RFRRAI 88
++ +Q A K RH R +T DV+ LK + A+ L + +
Sbjct: 10 LKTTIQLAAKWSRHCSRHKMTVQDVENVLKYQQNMGSLKIATVDTLNMGINQMTQVQGTS 69
Query: 89 GYRDLFYLDDKDVEF-KDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPE----------- 136
G ++ DV+ KD IE + P + ++ W G QPV E
Sbjct: 70 GTSGIWTFQKMDVDVEKDDIET-FVQIPRELRVI--WFMAPGRQPVQSEFTPNVDDEDGN 126
Query: 137 ---------NAPVQAIAAPSNGTNN--------------EQKDGLPVEIKLPVKHILSRE 173
AP+Q P T++ +QK GL K P IL+ E
Sbjct: 127 YYEKNGPAVMAPIQEKVLPPTSTSSCLSMFRETVKCAKSDQKVGL----KHPTLEILTVE 182
Query: 174 LQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN--YSL 231
Q++ I + + + D +AL +L TD+GL +P+ T + +S ++ SL
Sbjct: 183 QQIFMKDIITVCMGQDDKKR-HEALYTLETDAGLQVFLPHLTERICKSISCNISQRCLSL 241
Query: 232 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVA 290
+ RV+ +L N + LH ++PS+++C V + + R DNHW LRDF+AK +
Sbjct: 242 IIYAGRVLRSLSHNKACDMSVTLHHVLPSLLSCCVCRNMCLRPETDNHWALRDFSAKTLV 301
Query: 291 AICKRY 296
+ + +
Sbjct: 302 GLVRDH 307
>gi|321461258|gb|EFX72292.1| hypothetical protein DAPPUDRAFT_326386 [Daphnia pulex]
Length = 1378
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 44/280 (15%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+ E++++IA S G N + + +LA D YR+RE++Q + +RHS+R+ LT DDV+
Sbjct: 23 ISPESIQLIADSAGYPNVPSILSKSLAEDTSYRLRELIQSCSQILRHSKRSKLTKDDVNL 82
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDV--EFKDVIEAPLPRAPLDTSIV 121
AL+ +V V+G + P F YL + D+ V+E P++T
Sbjct: 83 ALRWSDVPQVHG-PNSTPENF---------LYLSEFDIYSSLDRVVELT-QEYPIETD-- 129
Query: 122 CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKI 181
V+ P +Q +A S +D L EI YF+KI
Sbjct: 130 --------VEVYSPMKLTIQYLALDS-------EDKLQPEIYFQ-----------YFEKI 163
Query: 182 TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWN 241
++ +S S+ V+ K AL +L + L PL+P + F+ + V N ++ + R+
Sbjct: 164 SQSLLSTSEYVV-KVALANLRENPKLQPLMPTLSGFLRNLVGFTSENSHVVRRIPRIFNA 222
Query: 242 LLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWEL 281
LL NPH+ I + ++ L+ G +L D+ ++L
Sbjct: 223 LLNNPHLHIGS--EECFLQLIQDLILNHGGEKLDDSIFQL 260
>gi|402590123|gb|EJW84054.1| hypothetical protein WUBG_05035, partial [Wuchereria bancrofti]
Length = 290
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 238 VVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRY 296
++ +L NP + +E LH+L+PSV++C+++++L R DNHW LR+F+++L+A IC+ Y
Sbjct: 1 MIQSLANNPALSLERCLHELLPSVLSCILSRQLCARPETDNHWALREFSSRLLANICRSY 60
Query: 297 GHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 346
N L++R+T+ L D L YG++ L LG + V +++P
Sbjct: 61 N--INHLRSRVTQVLAQVWRDESCTLAALYGSLYALNELGVDTVHSVVIP 108
>gi|159468858|ref|XP_001692591.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278304|gb|EDP04069.1| predicted protein [Chlamydomonas reinhardtii]
Length = 74
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 52/64 (81%)
Query: 8 TVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKL 67
+V IA S+ ++ + +AA ALAPDVEYR+RE++Q+A+K RHS+RT LTT D+++AL+L
Sbjct: 11 SVRAIALSVDVTYLTEEAAKALAPDVEYRLREVIQDALKFARHSKRTKLTTQDINDALRL 70
Query: 68 RNVE 71
RN+E
Sbjct: 71 RNIE 74
>gi|268553091|ref|XP_002634528.1| C. briggsae CBR-TAF-6.2 protein [Caenorhabditis briggsae]
Length = 812
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 15/161 (9%)
Query: 123 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQ-----------KDGLPVEIKLPVKHILS 171
HWL ++GVQP +PEN + E K P E ++ S
Sbjct: 215 HWLVVDGVQPCVPENVIPSEVKRKFQEQQQETQRLYGYSVPGIKRDPPPEKRMST-QTFS 273
Query: 172 RELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSR--GLNNY 229
E Q+ + ++T++ ++ ++ ++ L ++ TD+GL L F +A+ V G N
Sbjct: 274 MEHQVLYIEVTKI-LTNGSALERQKVLETIETDTGLQFLAGRFVILIAEGVRLHIGTRNT 332
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 270
L LM++ W+L++NP+I++E YL+ L+PS+++C+V+K +
Sbjct: 333 RGLANLMKLTWSLMKNPNIRLEKYLYVLVPSLISCVVSKNM 373
>gi|7509154|pir||T32410 hypothetical protein W09B6.2 - Caenorhabditis elegans
Length = 707
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 162/396 (40%), Gaps = 77/396 (19%)
Query: 9 VEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK-- 66
+ A+ +GI++ +T+AA L +++EI++ + K + S R + DV+ A++
Sbjct: 265 TQTAAEMLGITSLNTEAAELLEFLSREKLKEIVRLSAKWTQKSARRRMAVADVEHAIRST 324
Query: 67 -----------------LRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEA 109
++ ++P+ G ++G Y L D DV+ +D
Sbjct: 325 RQCGGLNISSVDTLNLGIQQLQPIQGTSTGI---------YSFLKSSADVDVDKEDT--E 373
Query: 110 PLPRAPLDTSIVCHWLAIEGVQPV--------------------------IPE-NAP--- 139
+ P D ++ + L EG QPV IPE N P
Sbjct: 374 TFIKIPRDLRVISYPLVNEG-QPVQSEYTVNVDEDDGNFFEKIVPEVMTMIPEKNTPSSS 432
Query: 140 ----VQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFK 195
+Q +QK GL K IL+ E Q++ I + + + D
Sbjct: 433 TTSSLQMFRDAVKTAKIDQKVGL----KPSTIEILTVEQQIFMKDIITVCMGQDDKKR-H 487
Query: 196 QALVSLATDSGLHPLVPYFTYFVADEVSRGLNN--YSLLFALMRVVWNLLQNPHIQIEPY 253
+AL +L TD+GL +P+ T + +S ++ SL+ RV+ +L N +
Sbjct: 488 EALYTLETDAGLQVFLPHLTERICKSISANISQRCLSLIIYAGRVLRSLSHNKACDMTVT 547
Query: 254 LHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQT--RLTKT 310
LH ++P++++C V + + R DNHW LRDF+AK + + + ++ +T RL
Sbjct: 548 LHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTLVGLVRDQVDKHDAGRTARRLFDF 607
Query: 311 LLNALLDPKRALTQHYGAVQGLAAL--GPNVVRLLL 344
D + + YG V L GP LL
Sbjct: 608 SHRIFRDTGSSFSMIYGTVHILQEFVAGPKKAAWLL 643
>gi|355723129|gb|AES07792.1| TAF6 RNA polymerase II, TATA box binding protein -associated
factor, 80kDa [Mustela putorius furo]
Length = 93
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 71 EPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEG 129
EP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD + HWL+IEG
Sbjct: 1 EPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEG 60
Query: 130 VQPVIPENAP 139
QP IPEN P
Sbjct: 61 CQPAIPENPP 70
>gi|308453105|ref|XP_003089302.1| hypothetical protein CRE_11592 [Caenorhabditis remanei]
gi|308241224|gb|EFO85176.1| hypothetical protein CRE_11592 [Caenorhabditis remanei]
Length = 959
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 124/271 (45%), Gaps = 49/271 (18%)
Query: 123 HWLAIEGVQPVIPENA-PVQAIAAPSNGTNNEQK------DGLPVEI--KLPVKH--ILS 171
HWL ++GVQP +PEN P + Q+ G+ +I K P ++
Sbjct: 218 HWLVVDGVQPCVPENVIPTEVKQKYQEQQQETQRVFGYGVSGVRKQIPEKRPTTQTVLML 277
Query: 172 RELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSR--GLNNY 229
+E Q+ + ++T++ ++ ++ ++ L ++ TD+G L F +A+ V G N
Sbjct: 278 QEHQVLYAEMTKI-LTNGSALERQKVLETIETDTGFQFLAGRFVILIAEGVRLHIGTKNI 336
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK---------RLGNRLADN--- 277
L L+++ W+L++NPHI +E YL+ L+PS+++C+V+K R G + +
Sbjct: 337 RGLANLLKLAWSLMKNPHIWLEKYLYVLVPSLISCVVSKSMVPIVDPARAGLKTKTSTVN 396
Query: 278 --------------------HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD 317
++LR+ T KL+A + Y L+ R+ + +L +L
Sbjct: 397 VGTPELTAEDRERIIRDLEFEFKLRESTGKLLAELASIYKD--QNLRVRIIQ-MLRKVLT 453
Query: 318 PKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
+ YG + A G + ++LP +
Sbjct: 454 GNKDPVAIYGVLCTFFAFGSLTINTVVLPRM 484
>gi|160331582|ref|XP_001712498.1| taf [Hemiselmis andersenii]
gi|159765946|gb|ABW98173.1| taf [Hemiselmis andersenii]
Length = 419
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 76/132 (57%), Gaps = 9/132 (6%)
Query: 236 MRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKR 295
+++++ L+ + +++P++HQ+ P ++ C++ KR D + L+ F+ K+V+ I R
Sbjct: 231 IKIIYALIWKNYHKMQPFIHQIFPILINCIIGKRFSGIKEDEQY-LKYFSVKIVSLIFFR 289
Query: 296 YGHVYNTLQTRLT----KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPY 351
+G Y+ L++++T K LLN+L + K + G + GL + G V L ++P L
Sbjct: 290 FGSSYSGLKSKITFLFSKQLLNSLKNIKYLI----GPLMGLTSFGTKTVELYVMPFLSII 345
Query: 352 LSLLEPEMLLEK 363
L +E E+ ++K
Sbjct: 346 LEQIEKEIFIKK 357
>gi|17536589|ref|NP_493919.1| Protein TAF-6.1 [Caenorhabditis elegans]
gi|351059362|emb|CCD73650.1| Protein TAF-6.1 [Caenorhabditis elegans]
Length = 470
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 162/396 (40%), Gaps = 77/396 (19%)
Query: 9 VEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALK-- 66
+ A+ +GI++ +T+AA L +++EI++ + K + S R + DV+ A++
Sbjct: 28 TQTAAEMLGITSLNTEAAELLEFLSREKLKEIVRLSAKWTQKSARRRMAVADVEHAIRST 87
Query: 67 -----------------LRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEA 109
++ ++P+ G ++G Y L D DV+ +D
Sbjct: 88 RQCGGLNISSVDTLNLGIQQLQPIQGTSTGI---------YSFLKSSADVDVDKEDT--E 136
Query: 110 PLPRAPLDTSIVCHWLAIEGVQPV--------------------------IPE-NAP--- 139
+ P D ++ + L EG QPV IPE N P
Sbjct: 137 TFIKIPRDLRVISYPLVNEG-QPVQSEYTVNVDEDDGNFFEKIVPEVMTMIPEKNTPSSS 195
Query: 140 ----VQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFK 195
+Q +QK GL K IL+ E Q++ I + + + D
Sbjct: 196 TTSSLQMFRDAVKTAKIDQKVGL----KPSTIEILTVEQQIFMKDIITVCMGQDDKKRH- 250
Query: 196 QALVSLATDSGLHPLVPYFTYFVADEVSRGLNN--YSLLFALMRVVWNLLQNPHIQIEPY 253
+AL +L TD+GL +P+ T + +S ++ SL+ RV+ +L N +
Sbjct: 251 EALYTLETDAGLQVFLPHLTERICKSISANISQRCLSLIIYAGRVLRSLSHNKACDMTVT 310
Query: 254 LHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQT--RLTKT 310
LH ++P++++C V + + R DNHW LRDF+AK + + + ++ +T RL
Sbjct: 311 LHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTLVGLVRDQVDKHDAGRTARRLFDF 370
Query: 311 LLNALLDPKRALTQHYGAVQGLAAL--GPNVVRLLL 344
D + + YG V L GP LL
Sbjct: 371 SHRIFRDTGSSFSMIYGTVHILQEFVAGPKKAAWLL 406
>gi|341896828|gb|EGT52763.1| CBN-TAF-6.1 protein [Caenorhabditis brenneri]
Length = 471
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 164/400 (41%), Gaps = 85/400 (21%)
Query: 9 VEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMR----HSRRTTLTTDDVDEA 64
+ A +GI+N + AA + E+ RE ++E ++ R S R +T D++
Sbjct: 29 TQTCADMLGITNLDSSAAELM----EFLARETLKETLRLARTWTHRSARRKVTIADLEHT 84
Query: 65 LK-------------------LRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKD 105
+K + + V G SGG F++A +D DV+ +D
Sbjct: 85 IKYMQNTGNLNIASVDTLNLGIHQLTAVPG-TSGGLYSFQKAS--------NDIDVDKED 135
Query: 106 VIEAPLPRAPLDTSIVCHWLAIEGVQPV-------------------IPE-NAPVQAIAA 145
+ P + ++ + L +G QPV PE AP+Q
Sbjct: 136 T--ETFVKIPREIRLISYPLVTDG-QPVQSDYTVNVDEEDGTYFEKNAPEVMAPIQEKTT 192
Query: 146 PSNG--------------TNNEQKDGL-PVEIKLPVKHILSRELQLYFDKITELAVSRSD 190
N T E+K GL P+ I++ L+ E Q++ I + + + D
Sbjct: 193 HQNAKRSCLQMFREAVKSTKLEEKVGLKPMAIEM-----LTVEQQIFMKDIITVCMGQDD 247
Query: 191 SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN--YSLLFALMRVVWNLLQNPHI 248
+AL +L D+GL ++P+ T + +S ++ SL+ RV+ +L N
Sbjct: 248 KKR-HEALYTLENDAGLQVVLPHLTERICKSISANISQRCLSLIIYAGRVLRSLSHNKAC 306
Query: 249 QIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQT-- 305
+ LH ++P++++C V + + R ADNHW LRDF+AK + I + ++ T
Sbjct: 307 DMTVTLHHVLPALLSCCVGRNMCTRPEADNHWALRDFSAKTLVGIVREQVDKRDSGFTAR 366
Query: 306 RLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 345
RL DP + YG + L P+ + + L
Sbjct: 367 RLFDFSYRIFKDPSSSFPMIYGTILILQEFVPDAKKAMWL 406
>gi|219116616|ref|XP_002179103.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409870|gb|EEC49801.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 498
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 175/399 (43%), Gaps = 47/399 (11%)
Query: 53 RTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKD---------VEF 103
R L D++ AL++R E +Y A P + D+ D V
Sbjct: 73 RRRLHAADINLALQMRQSEKLYATALVPPDTVHPS-SMSTTTTTDNPDHSLPASHRPVNL 131
Query: 104 KDVI-EAPLP-RAPLDTSIVCHWLAIEGVQPVIPENAPVQA-----------IAAP--SN 148
D + A LP + P + ++ WLA++G+ P + V A +A P +N
Sbjct: 132 ADFLRHAQLPFQQPAEVALHVSWLAVDGIAPEPHPHGVVGAWTDRHTPSPHPLAMPHENN 191
Query: 149 GTNNEQKDGLPVE--IKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQA------LVS 200
+N + P ++ +LS ELQLYF ++T + +++ A L
Sbjct: 192 NHHNPYQSTAPQAWLVQQLQAAMLSEELQLYFTRVTYALDNTTNTHSPTSARAQDRLLDR 251
Query: 201 LATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 260
LA D+ L LVP+F +V + ++ + A +R+V +L NP + +E YLH+L+P+
Sbjct: 252 LAVDAHLQELVPFFARYVTQTLY--ASHVTHQRAAVRLVQAMLHNPTLHLELYLHELVPA 309
Query: 261 VVTCLVA---KRLGNR-----LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLL 312
++T +VA R R A HW LR + + +C+++G Y TLQ R+ +TL
Sbjct: 310 LLTAIVADHRDRTNQRTSVAVTATPHWRLRVEASVALRTVCRQFGPEYPTLQARVLRTLC 369
Query: 313 NALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHE 372
A L P R+ +G + + GP ++ +LP L + E E + E + E
Sbjct: 370 QA-LGPDRSRPAVFGGLTAVTLFGPLAIQAFVLPMLPHAWNAWEEEA--QSSATEEVQWE 426
Query: 373 AWRVYGALLQAAGQCIYDRLKIFP-PLSSLPARSVWKTN 410
+ A L A G + P L++ PA V T+
Sbjct: 427 TRQCQQAALGALGTWLRSYAPTAPQTLTAGPAEQVAATD 465
>gi|300120019|emb|CBK19573.2| Transcription initiation factor TFIID (subunit D5) [Blastocystis
hominis]
Length = 349
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 30/248 (12%)
Query: 20 NFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASG 79
+ S +A L ++ I+ I+QEA M H RRT LT D+++ L + N + + G+ +
Sbjct: 72 SLSIEARKRLELILQKEIQFILQEAKMYMEHCRRTKLTAGDIEKMLYIYNFDKILGYKN- 130
Query: 80 GPLRFRRAIGYRDLFYLDDKD-----VEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQ-PV 133
RR+ R L L DK V +IE+ +P PL+TS +W +EG Q
Sbjct: 131 -----RRSEMQRSLMVLADKSNTSNIVSVNHIIESEVPELPLETSFKVNWFVVEGNQIQY 185
Query: 134 IPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVS--RSDS 191
+ E S + V H LS E +LY KI S ++
Sbjct: 186 LKEMGEDDDSPDDSPDVQLLSQSTRSV-------HSLSFECELYLKKIKSRLYSSEEENT 238
Query: 192 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN-----YSLLFALMRVVWNLLQNP 246
+F Q L TD GL+ + PY +V + + + L +++++ +LL N
Sbjct: 239 EVFHQ----LQTDEGLNQICPYLVDWVQSTTQKIMQKKPVRMVAYLRYIIQLIHSLLLNR 294
Query: 247 HIQIEPYL 254
H+ I Y+
Sbjct: 295 HLHIVSYV 302
>gi|308492802|ref|XP_003108591.1| hypothetical protein CRE_10940 [Caenorhabditis remanei]
gi|308248331|gb|EFO92283.1| hypothetical protein CRE_10940 [Caenorhabditis remanei]
Length = 839
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 123 HWLAIEGVQPVIPENA-PVQAIAAPSNGTNNEQK------DGLPVEI--KLPVKH--ILS 171
HWL ++GVQP +PEN P + Q+ G+ +I K P ++
Sbjct: 218 HWLVVDGVQPCVPENVIPTEVKQKYQEQQQETQRVFGYGVSGVRKQIPEKRPTTQTVLML 277
Query: 172 RELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSR--GLNNY 229
+E Q+ + ++T++ ++ ++ ++ L ++ TD+G L F +A+ V G N
Sbjct: 278 QEHQVLYAEMTKI-LTNGSALERQKVLETIETDTGFQFLAGRFVILIAEGVRLHIGTKNI 336
Query: 230 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 270
L L+++ W+L++NPHI +E YL+ L+PS+++C+V+K +
Sbjct: 337 RGLANLLKLAWSLMKNPHIWLEKYLYVLVPSLISCVVSKSM 377
>gi|300176085|emb|CBK23396.2| unnamed protein product [Blastocystis hominis]
Length = 284
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 31/252 (12%)
Query: 20 NFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASG 79
N S A L ++ I+ I+QEA M H RRT LT D+++ L + N + + G+ +
Sbjct: 10 NLSIKARKRLELILQKEIQFILQEAKMYMEHCRRTKLTAGDIEKMLYIYNFDKILGYKN- 68
Query: 80 GPLRFRRAIGYRDLFYLDDKD-----VEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVI 134
RR+ R L DK V +IE+ +P P++TS +W +EG Q
Sbjct: 69 -----RRSEMQRSFMLLSDKSNDSKIVSVNHIIESEVPELPMETSFKVNWFVVEGNQ--- 120
Query: 135 PENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVS--RSDSV 192
+Q +++ D V++ H LS E +LY KI S ++
Sbjct: 121 -----IQ-YRKEMGEDDDDSDDSPDVQLLSQSIHSLSFECELYLKKIKSRLYSSEEENTE 174
Query: 193 LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN-----YSLLFALMRVVWNLLQNPH 247
+F Q L TD GL+ + PY +V + + + L +++++ +LL N H
Sbjct: 175 VFHQ----LQTDEGLNQICPYLVDWVQSTTQKIIQQKPVRMVAYLRYIIQLIHSLLLNRH 230
Query: 248 IQIEPYLHQLMP 259
+ I Y+ + P
Sbjct: 231 LHIVSYVSLVSP 242
>gi|302142820|emb|CBI20115.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 295 RYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 345
RY HVY+ +Q +T+TLL+A LDP +AL QHYGA+QGLAA GP+VV +LL
Sbjct: 38 RYEHVYHNIQPHVTRTLLHAFLDPIKALPQHYGAIQGLAAFGPSVVSFVLL 88
>gi|224068877|ref|XP_002302847.1| predicted protein [Populus trichocarpa]
gi|224150375|ref|XP_002336947.1| predicted protein [Populus trichocarpa]
gi|222837204|gb|EEE75583.1| predicted protein [Populus trichocarpa]
gi|222844573|gb|EEE82120.1| predicted protein [Populus trichocarpa]
Length = 58
Score = 72.0 bits (175), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 36/42 (85%)
Query: 501 SAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 542
S L Q+W DDLN+G LLVSLFELFGE ILSFIP+PEMSLFL
Sbjct: 17 SGHLKQLWNDDLNTGHLLVSLFELFGESILSFIPSPEMSLFL 58
>gi|219363049|ref|NP_001137111.1| uncharacterized protein LOC100217288 [Zea mays]
gi|194698392|gb|ACF83280.1| unknown [Zea mays]
Length = 107
Score = 71.6 bits (174), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 435 IATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGD 494
+ATD ++++++SM M+ A P + SS +S + +RD+G
Sbjct: 1 MATDATANSMASASMGGNMQ-GAMDGFPNQLGNPGMMQASSSGQTVESIPSAAVRRDQGS 59
Query: 495 SQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 542
AQ++SA+L Q WK+D ++G LL SL+E+FGE I SF+ PE+SLF+
Sbjct: 60 DLAQRVSAVLRQAWKEDQDTGHLLGSLYEVFGEAIFSFVQPPEISLFV 107
>gi|403372730|gb|EJY86271.1| hypothetical protein OXYTRI_15737 [Oxytricha trifallax]
Length = 492
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Query: 1 MSIVP-KETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTD 59
MSI+ K+ + A+S+GI + + D+E ++ EI+QE+ K MRHS+R L TD
Sbjct: 1 MSILQDKDLISSFAESVGIKKLEKEVEDLILSDLESKVLEILQESKKIMRHSKRDYLKTD 60
Query: 60 DVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLD-T 118
DV +++ ++ ++G+ S P + R ++L+++ +++ K++ PLD T
Sbjct: 61 DVKLSMEKLSIPNMFGYPSTVPYTYERVPDQQNLWFVKSQNINLKELAIDHKLHTPLDST 120
Query: 119 SIVCHWLAIEGVQPVIPENAPVQAIAA 145
+ + A++G QP I E + I A
Sbjct: 121 TYKIYIQALDGNQPKIAETIEEREIPA 147
>gi|198467420|ref|XP_002134530.1| GA22349 [Drosophila pseudoobscura pseudoobscura]
gi|198149236|gb|EDY73157.1| GA22349 [Drosophila pseudoobscura pseudoobscura]
Length = 580
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
VE+K P + L++E Q ++ I A D AL SL D L ++P T +
Sbjct: 85 VELKPPKRFPLTKEQQAFYQTIIH-ACWGDDKDALADALKSLQIDPSLEYILPQLTTHIV 143
Query: 220 DEVSRGL---NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL------ 270
D + GL + Y + L+ + L++N I + H ++PSV++CL+ +
Sbjct: 144 DGIDEGLYGKDVYQCIVPLL-MAQALVKNSRITFNKHFHLILPSVLSCLLIEEAFEKENA 202
Query: 271 -GNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 329
GN HW LR+ ++++ I R YN L R+ + L+ L T YGAV
Sbjct: 203 EGNEF---HWYLRELASRIMGDIV-RVTKNYNLL-GRIIRVLIRGLRRHGNLFTI-YGAV 256
Query: 330 QGLAALGPNVVRLLLLPNL 348
G LG VV LLP L
Sbjct: 257 VGFGQLGSLVVEDYLLPEL 275
>gi|119594501|gb|EAW74095.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa, isoform CRA_b [Homo
sapiens]
gi|194375247|dbj|BAG62736.1| unnamed protein product [Homo sapiens]
Length = 148
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D +
Sbjct: 12 IPRESVRLMAESTGL-ELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNR 70
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSIVC 122
AL+ +VE V G+ S L R A +L++ +D++V ++ + +P+ +T++
Sbjct: 71 ALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETAVRV 129
Query: 123 HWLAIEGVQPVIPENA 138
H ++G + P+ +
Sbjct: 130 HVSYLDGKGNLAPQGS 145
>gi|399218371|emb|CCF75258.1| unnamed protein product [Babesia microti strain RI]
Length = 945
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 179/454 (39%), Gaps = 114/454 (25%)
Query: 4 VPKETVEVIAQSIGIS-----NFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTT--- 55
+P E + +A++ G + T +A +A VE+RI++I+QEA K M + RTT
Sbjct: 342 IPSEFIISLAKTHGFMQSGKVDLQTVSARIIADTVEFRIKQIIQEASKFMYRNARTTNHM 401
Query: 56 -LTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDK--------------- 99
LT+DD+ ALK ++ + G++ R+ A D Y+ ++
Sbjct: 402 ALTSDDIRCALKSLKMQDLPGYSDLCNHRYVCA----DKLYMGNRVIKRESKLKSTKDNW 457
Query: 100 ------DVEFKDV--IEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-------------- 137
D+ + D+ + +P+P S+ HWL+++G P++ +
Sbjct: 458 GRCKLSDIVYNDMGTLASPVP------SLSVHWLSVKGTLPLVSSHFGVDVTDKLSRRAE 511
Query: 138 APVQAIAAPSNGTNNEQKDGLPVEIKLPVK------------------------------ 167
V I S NE + + L +K
Sbjct: 512 EAVALIGDSSKMRKNENIENFSLTNNLLLKTRNNNIITRLSNAFTDSMNNSIARATNTAN 571
Query: 168 ----------HILSRELQLYFDKITELAVSRS------DSVLFKQ---ALVSLATDSGLH 208
H+L +E + + + A++R+ + +KQ L L+T L
Sbjct: 572 EPTTYIPRVEHVLEKEHHFFLNCVKN-AITRAIDLGVIHTSQYKQLDKVLHILSTSLALD 630
Query: 209 PLVPYFTYFVADEVSRGLNNYSLLFA---LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCL 265
L+P +YF A ++ + N SL A ++ + L+ NPH I ++HQL+ ++
Sbjct: 631 QLMPELSYFFATQMDIHMKN-SLPHAVSIMLSFAYALISNPHAHIHFHIHQLLIPIIQVA 689
Query: 266 VAK-RLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQ---TRLTKTLLNALLDPKRA 321
+ K L LR A LV I N L+ ++L L AL + +
Sbjct: 690 IGKCEFPIVLIYQILRLRKKAANLVGKIAFVLRSSRNGLEFIDSQLILLLKQALSADEIS 749
Query: 322 LTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLL 355
+ YG++ L+ + P LLL PN LS L
Sbjct: 750 IFTLYGSIACLSNMSPISRSLLLYPNFNSILSTL 783
>gi|339246267|ref|XP_003374767.1| transcription initiation factor TFIID subunit 6 [Trichinella
spiralis]
gi|316971978|gb|EFV55686.1| transcription initiation factor TFIID subunit 6 [Trichinella
spiralis]
Length = 420
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 113/261 (43%), Gaps = 27/261 (10%)
Query: 118 TSIVCHWLAIEGVQPVIPENAPV--QAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQ 175
T + HWL IEG QP++PEN + A +N E ++ L ++ +REL
Sbjct: 98 TCLNAHWLGIEGKQPLLPENRSQGRSYVVAEEGMSNIETEELLHQDMNFDQLTEETRELV 157
Query: 176 L-----------------YFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV 218
L +F ++ F++AL + T GL P + +F F
Sbjct: 158 LELLDGCVSKDETKRFVYFFSSYFYFNNCNNEFCPFQEALRMIQTHVGLQPALSFFVIFY 217
Query: 219 ADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD 276
+ ++ L + + +++++ LL NP I++ Y +L+PS+++C V + D
Sbjct: 218 LEGINCNLLCKDLRHITCMLQMLNALLLNPAIRLWKYTPKLLPSLLSCAVNMIFDVKCGD 277
Query: 277 NH-WELRDFTAKLVAAICKRYGHV-----YNTLQTRLTKTLLNALLDPKRALTQHYGAVQ 330
+ W +R+ A ++ + + + + L+ + + L D + + YG +
Sbjct: 278 DRAWLVRERAADILGDLLNYFERMAVDDGEDELKIKFIRHLTTIWNDEQTTIPSAYGVLC 337
Query: 331 GLAALGPNVVRLLLLPNLGPY 351
L LG V+ ++PNL +
Sbjct: 338 ILRKLGNLVITSTVIPNLRKF 358
>gi|123489292|ref|XP_001325361.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121908259|gb|EAY13138.1| hypothetical protein TVAG_444210 [Trichomonas vaginalis G3]
Length = 403
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 139/339 (41%), Gaps = 13/339 (3%)
Query: 16 IGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYG 75
+GI D A LA D E+RI +++Q + + + LT + ++ L + G
Sbjct: 16 LGIQFARPDVAQGLAQDAEFRISQLIQPIVLLKQITNSKRLTCEHINSVLPYFQQNILLG 75
Query: 76 FASGGPLRFRR--AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQ-- 131
++ ++ A +++ +D V +++ + + W + G +
Sbjct: 76 YSERDDYDIQQITAPDKSIIYFAEDTKVPLQNITQEVQKEPQRASHFKFQWKMVNGAKFD 135
Query: 132 PVIPENA----PVQAIAAPSNGTNNEQKDGLPVEIKLP-VKHILSRELQLYFDKITELAV 186
+N+ V IA +N N+ K K L +L YF+ T++
Sbjct: 136 EAAMKNSFNTDKVGMIAPITNIFANQFAQNTDFSTKAENTKLSLPEDLIDYFNDATDILS 195
Query: 187 SRS-DSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQN 245
S + D++ F L TD G PL+P+F + E++ L+N S + + R L+ N
Sbjct: 196 SENFDTLEF--VYPKLQTDIGTAPLLPFFLKYFYAEIAEYLDNSSRMIPVARATLALVSN 253
Query: 246 PHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQT 305
++ I Y+H + T + N L ++ +R ++ A+ KR Y ++T
Sbjct: 254 TYLPISLYVHSFLKIAFTLSQTVVVTNNLINDEC-IRQTAGDIIIALIKRASSEYPGIRT 312
Query: 306 RLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 344
+ L+ +P+ YGA+ L L + R ++
Sbjct: 313 EIFNQLVGVSFNPETNYPALYGALYTLLNLDDDAFRTVI 351
>gi|363746114|ref|XP_003643530.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like [Gallus
gallus]
Length = 170
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P++ V +A+ G + S + A LA DV YR+RE Q + + ++H+RR LT +D +
Sbjct: 11 LPRDAVRRMAEGAG-AELSEEGAALLAEDVCYRLREAAQNSAQFLKHTRRRKLTVEDFNR 69
Query: 64 ALKLRNVEPVYGFASG 79
AL+ NVE + GF SG
Sbjct: 70 ALRWSNVEALCGFGSG 85
>gi|145515611|ref|XP_001443705.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411094|emb|CAK76308.1| unnamed protein product [Paramecium tetraurelia]
Length = 667
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 135/308 (43%), Gaps = 24/308 (7%)
Query: 25 AALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEP--VYGFASGGPL 82
A L L VE +R+I+QEAIK RH R+ L + D++ A+K +N++ ++GF +
Sbjct: 239 AELHLFILVEQNVRKIIQEAIKYQRHFRKKQLNSQDIELAIKDQNMQKSEIFGFQYMDSI 298
Query: 83 RFRRAIGYRDLFYLDDKDVEFKDVIEAPLP--RAPLDTSIVCHWLAIEGVQPVIPENA-- 138
+ + D + L+D+ ++ +D+I + + PL + + ++ Q + +
Sbjct: 299 NLCKRM---DEYVLNDQSLDLRDLISHQMRTVKIPLGFPSLSIFNVMKDYQMINSQETQS 355
Query: 139 --PVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFK- 195
+ I + + E K + IK V IL+ Q +L S+ F
Sbjct: 356 IMQYKDIIQTESFQSMENKKSFNI-IKDNVISILTVHQQSIVKNFKDLFEKEVISLKFNF 414
Query: 196 -QALVSLATD-------SGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPH 247
Q V L +D + + P + + Y D+V L Y ++ + L+ N
Sbjct: 415 SQEFVQLLSDLESYKDVAQIVPFIVQYLYSQQDQVQ--LFYYKHRCVIIECLSRLIMNNQ 472
Query: 248 IQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRL 307
I +E LHQ++ +V L AK + L EL+ TAK + + ++ Y L+ +
Sbjct: 473 INLEFQLHQIIKILVKFLTAKIIEINLKF-QIELQVKTAKCLNYLLDKFNLKYQALRQNV 531
Query: 308 TKTLLNAL 315
+LN L
Sbjct: 532 DLVILNKL 539
>gi|145506184|ref|XP_001439058.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406231|emb|CAK71661.1| unnamed protein product [Paramecium tetraurelia]
Length = 459
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 153/358 (42%), Gaps = 31/358 (8%)
Query: 25 AALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNV--EPVYGFASGGPL 82
A L L VE +R+I+QEAIK RH R+ L + D++ A+K +N+ +YGF +
Sbjct: 23 AELHLFILVEQNVRKIIQEAIKYQRHFRKKQLNSQDIELAIKDQNLLKSEIYGFQYMDSI 82
Query: 83 RFRRAIGYRDLFYLDDKDVEFKDVIEAPLP--RAPLD------TSIVCHWLAI--EGVQP 132
+ + D + L+D+ ++ +D+I + + PL +++ + I + Q
Sbjct: 83 NLSKRM---DEYVLNDQSLDLRDLISHQMRTVKIPLGFPSLSIFNVMKEYQMINSQETQS 139
Query: 133 VIPENAPVQAIA---APSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRS 189
++ +Q + S T N KD + + + + I+ L+ ++ L + S
Sbjct: 140 IMQYKDIMQTESFQNVESKKTFNIIKDNVMSILTVHQQSIVKNFKDLFEKEVISLKFNFS 199
Query: 190 DSVLFKQALVSLATDSGLHPLVPYFT-YFVADEVSRGLNNYSLLFALMRVVWNLLQNPHI 248
F Q L L + + +VP+ Y + + L Y ++ + L+ N I
Sbjct: 200 QE--FVQLLSDLESYKDVAQIVPFIVQYLYSQQDQVQLFYYKHRCVIIECLNRLIINNQI 257
Query: 249 QIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 308
+E LHQ++ +V L AK + + + EL+ TA+ + + ++ Y L+ +
Sbjct: 258 NLEFQLHQILKILVKFLTAKIIEINIK-SQIELQIKTARCLNYLLDKFNLKYQALRQNID 316
Query: 309 KTLLNALLDPK---------RALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEP 357
+ +L K ++L + Y VQ +V L + + + +E
Sbjct: 317 RVILEKFERVKSKIEQKCSHKSLLKAYSIVQYFIEQNVSVQHLKFIEQMSELIRKMEQ 374
>gi|123438902|ref|XP_001310228.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121891989|gb|EAX97298.1| hypothetical protein TVAG_123480 [Trichomonas vaginalis G3]
Length = 375
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 134/315 (42%), Gaps = 20/315 (6%)
Query: 29 LAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI 88
+A D E ++ I+++A R+SR L ++ L+ + +P+ G+ + P ++
Sbjct: 27 VADDAESYVKNILRKASILYRNSRAEKLMPKHLNTILESTHEKPLLGY-NNSPSFLLSSV 85
Query: 89 GYR--DLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAP 146
G+ ++F + D + + +++ P W + GV P E A
Sbjct: 86 GFEQSEIFIVKDPIEKLTNAMDSKPATIPRMFPYGYQWFLVGGVPP---ERVVADHSADR 142
Query: 147 SNG-TNNEQKDGL-PVEIKLPVKH----------ILSRELQLYFDKITELAVSRSDSVLF 194
SN + +E D L P + + + SR L Y I +L ++S L
Sbjct: 143 SNDISRSESFDILRPSSVDTTSRTYSTRQYVADVVSSRHLAEYVRIINQLRDDTTNSRL- 201
Query: 195 KQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYL 254
+ L + + L PL+PY F+ +E++ N + ++ V LL N + I +
Sbjct: 202 -KILDHIRKEPTLQPLIPYLLQFIINELATHYNEPVFVDIVISVACALLDNEFLSISLFA 260
Query: 255 HQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNA 314
H L+ ++ LV + +A+ ++R +A L+ + +R Y ++ + L+
Sbjct: 261 HALIRIALSILVTPDSSSMIAEEDAKIRSESAYLLKRVIERCESGYTEMRVAVFNYLVKI 320
Query: 315 LLDPKRALTQHYGAV 329
L + L HYGA+
Sbjct: 321 LFNANSTLAAHYGAL 335
>gi|123492842|ref|XP_001326159.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909069|gb|EAY13936.1| hypothetical protein TVAG_028890 [Trichomonas vaginalis G3]
Length = 398
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 147/340 (43%), Gaps = 20/340 (5%)
Query: 21 FSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGG 80
FS + AL + E I + +Q+ + +S LT + ++ LK R +P+ G++S
Sbjct: 21 FSKGSMQALIEESENFINKFVQDLSFVLINSHAQKLTPNHFNKVLKSRGEQPLLGYSSNV 80
Query: 81 PLR-FRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 139
++ ++ G + Y V I P ++ ++G++ +P
Sbjct: 81 RVKDYQTQPG--EFSYQKYSTVPLSQYITTSRPFVNNTIPTGIKYVLVDGIK--VP---- 132
Query: 140 VQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSR-ELQLYFDKITELAVSRSDS--VLFKQ 196
+ S T +++ EI V +LS+ ++ + I L + S V KQ
Sbjct: 133 -TFMKKSSTKTKSDKPRSDEPEI---VSGVLSKKQIDYMVESIFYLRTDDNHSLEVGLKQ 188
Query: 197 ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 256
L D ++ L PY +F+ +++ +N + LM++ + N ++ + Y H
Sbjct: 189 IL---EDDELINVLTPYLLHFITGKMAVQYHNVEKIVMLMKMATAIASNNNVDLISYFHP 245
Query: 257 LMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 316
+ ++ L+ +G+ D+ +R ++L+ + + + Y + + +L++ L
Sbjct: 246 FLRICMSGLIGTDVGSNETDDDSNVRRCASQLLNVLHSKCKNAYPAMTKAIYNSLISVLF 305
Query: 317 DPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 356
+ ++ H GAV GL LG ++P+L YL+ L+
Sbjct: 306 NETTSIAAHIGAVYGLEVLGIESCE-RVIPHLAGYLAALQ 344
>gi|1942937|pdb|1TAF|B Chain B, Drosophila Tbp Associated Factors Dtafii42DTAFII62
HETEROTETRAMER
Length = 70
Score = 60.1 bits (144), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 46/66 (69%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S + E+++VIA+SIG+ + S DAA LA DV +++ I+Q+A K M H++R L+ D+
Sbjct: 5 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDI 64
Query: 62 DEALKL 67
D +LK+
Sbjct: 65 DMSLKV 70
>gi|242011132|ref|XP_002426309.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510386|gb|EEB13571.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 521
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 155/369 (42%), Gaps = 53/369 (14%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+ ++V +A++ G S D A LA DV YR+R I+Q H++ L + D++E
Sbjct: 46 ISTKSVLTMAEAAGFSGLQEDVAKNLAEDVTYRLRYIIQ-------HNK---LNSADLNE 95
Query: 64 ALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC- 122
LK+ +V +YG+ PL+ I D++ L+D V+ ++ + + R P S +
Sbjct: 96 VLKMCDVPSIYGYTVNDPLQNFIYIKEADVYVLEDNLVDLPEIALSEI-RVPKSNSYIAT 154
Query: 123 -HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKI 181
W+ V+ E ++ +N + +E + I+ E ++ + I
Sbjct: 155 GSWMKSGEVKTSNEEVKTTTSVDQSNNENSKLSGKSSTLERQRSGNEIVGNETKIPTNLI 214
Query: 182 TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWN 241
++ +++L L +L T V
Sbjct: 215 KYYGIT-CNTILGHSDLKTLQT-----------------------------------VEA 238
Query: 242 LLQNPHIQIEPY--LHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHV 299
L +N I PY +++ +++ + + ++++ + + LR + A+++A I ++ +
Sbjct: 239 LSKNNSIDFGPYSATTRVVNAILLIVALDKKSSKISYD-FSLRSYAARVLALILCQWC-I 296
Query: 300 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEM 359
+ + + + + L+D L HYGA+ L A+GP + L + YL+ LE
Sbjct: 297 RDEQKFSVVRKMGKLLIDFNATLKVHYGALTLLVAMGPETLFETLHGIIRQYLNYLERLK 356
Query: 360 LLEKQKNEV 368
L KN +
Sbjct: 357 LNSISKNVI 365
>gi|195164473|ref|XP_002023072.1| GL16368 [Drosophila persimilis]
gi|194105134|gb|EDW27177.1| GL16368 [Drosophila persimilis]
Length = 501
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 160 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 219
VE+K P + L++E Q ++ I A D AL SL D L ++P T +
Sbjct: 85 VELKPPKRFPLTKEQQAFYQTIIH-ACWGDDEDALAHALKSLQIDPSLEYILPQLTTHIV 143
Query: 220 DEVSRGLNN---YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL------ 270
D + GL + Y + L+ + L++N I + H ++PSV++CL+ +
Sbjct: 144 DGIDEGLYDKDVYQCIVPLL-MAQALVKNRRITFNKHFHLILPSVLSCLLIQEAFEKEDV 202
Query: 271 -GNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 327
GN HW LR+ ++++ I R YN L R+ +T N +D A H+G
Sbjct: 203 EGNEF---HWYLRELASRIMGDIV-RVIKSYNLL-GRIIRTPPNE-MDKYVAQYGHFG 254
>gi|123402671|ref|XP_001302096.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121883350|gb|EAX89166.1| hypothetical protein TVAG_229880 [Trichomonas vaginalis G3]
Length = 403
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 158/370 (42%), Gaps = 31/370 (8%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
V + TV++IA SI ISN T + L+ + + I +I++ A S+R+ +T D++E
Sbjct: 3 VAENTVKLIASSIRISNIQTPELIRLSNETQQFIIDIVENAKAIALISKRSRITAKDINE 62
Query: 64 ALKLRNVEPVYGFASGGPLRFRRA-IGYRD-LFYLDDKDVEFKDVIE---APLPRAPLDT 118
+L+ + E + G+ + +D L DK +E DV P AP
Sbjct: 63 SLESYSYETLLGYEHMKKPKITTIPFSKQDCLTIFADKRLEINDVANWKLLPYQLAP--- 119
Query: 119 SIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYF 178
H+ + P+I +Q P+ NE + +I PV+ L YF
Sbjct: 120 ----HF----KIFPLIFNGTIIQ---TPNEEIPNELAE--ETQIAQPVES--YTRLTAYF 164
Query: 179 DK-ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMR 237
K I+ L S F + +A D + L P + ++ D + ++++ ++R
Sbjct: 165 QKSISYLFEEESK---FCTVIEHIAKDMYVGELFPRYIDYIEDFLISSQDDFTKCLRVLR 221
Query: 238 VVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYG 297
+ L NP QI + ++ +T L + + +L L++ +
Sbjct: 222 FLIALCSNPEYQIIEKIDNIISFGLTFLTSNEDKRASSLIRCQLYQKAVILLSIVTNSVS 281
Query: 298 HVYNTLQTRLTKTLLNAL-LDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 356
+ +++ L L + + L+ AL G+++ L+ +G +++R+ +LP L L
Sbjct: 282 GMLPDIKSSLAIELRSVMQLENAYALA---GSIKLLSEMGQDIIRIEVLPRLKEIYLLCL 338
Query: 357 PEMLLEKQKN 366
E +++KN
Sbjct: 339 NEKFTQEEKN 348
>gi|308486980|ref|XP_003105686.1| CRE-TAF-6.1 protein [Caenorhabditis remanei]
gi|308255142|gb|EFO99094.1| CRE-TAF-6.1 protein [Caenorhabditis remanei]
Length = 314
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 192 VLFKQALVSLATDS---GLHPLVPYFTYFVADEVSRGLNN--YSLLFALMRVVWNLLQNP 246
+L L+S+ D+ L +PY T + +S ++ SL+ RV+ +L N
Sbjct: 83 ILVTIMLLSMENDTISTRLSVFLPYLTERICKSISANISQRCLSLIIYAGRVLRSLSLNK 142
Query: 247 HIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICK 294
+ LH ++PS+++C V + + R DNHW LRDF+AK + + +
Sbjct: 143 ACDMTVSLHHVIPSLLSCCVGRNMCLRPETDNHWALRDFSAKTLVMLVR 191
>gi|399949864|gb|AFP65521.1| transcriotion associated factor [Chroomonas mesostigmatica
CCMP1168]
Length = 436
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 197 ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 256
L SL D L +VPY ++ + + + S ++++ L N ++EP++HQ
Sbjct: 197 CLESLTKDQSLFAVVPYVIVYLNQFLLKEIKFSSKFEFGIKIIRALFLNNSFKLEPFIHQ 256
Query: 257 LMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 316
++P ++ L+ G + +LR ++A ++ I R+G Y LQ+RL+
Sbjct: 257 ILPILIKILIGD-FGKNSSSKVLDLRLYSANIIGFIVNRFGQRYIGLQSRLSFYFSKRFF 315
Query: 317 DPKRALTQHYGAVQGLAALGPNVVRLLLLP 346
+ +GA+ GL LG + L LP
Sbjct: 316 HINENFSVIHGALIGLVVLGNKTLELSGLP 345
>gi|449269236|gb|EMC80031.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L, partial [Columba livia]
Length = 202
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 77/185 (41%), Gaps = 28/185 (15%)
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV-------ADEV 222
LS L Y+ +T AV D+ L K AL ++ + +P F Y +DEV
Sbjct: 20 LSDNLLRYYHHVT-CAVLGDDAQLMKVALQDQQNNAKITAFLPCFVYAAKQGECGASDEV 78
Query: 223 ----SRGLNNY-------------SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCL 265
LN++ L ++ V LL NP + + PY+ L SV+ C+
Sbjct: 79 QPNSCVSLNSWVPPSQVKSISHDLPQLHLVLHVAHGLLHNPFLFLGPYVRSLSSSVLYCV 138
Query: 266 VAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT 323
+ N L D HW LR ++A L+ I +G + L + L AL DP L
Sbjct: 139 LEPLAASINPLND-HWPLRSYSAMLLGRIFWTHGEAVSGLCQYILLALHKALADPVCPLC 197
Query: 324 QHYGA 328
H GA
Sbjct: 198 SHCGA 202
>gi|16648300|gb|AAL25415.1| LD25013p [Drosophila melanogaster]
Length = 260
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 113/260 (43%), Gaps = 29/260 (11%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
S+ P+ + S G+ + A L+ +V+ I ++ EA K MR R L +
Sbjct: 19 SLSPRSLSAIFFHSTGL-HLDDGVAQWLSINVKEDITNLLNEAGKYMRRIRDRRLQLSHI 77
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
A+++ + + Y F R + D + V K V EA + D +V
Sbjct: 78 QHAVRMHD-DLCYDI-------FFRLVHCDDCKMPPSQKV-LKTVREA-VTAEKKDELLV 127
Query: 122 CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE---IKLPVKHILSRELQLYF 178
+ E VQ +PE P ++ P T L VE +K ++ LS E Q +F
Sbjct: 128 SY---PESVQESVPEPVPETSLEPPPMHTG-----WLKVEQVLLKPSKRYPLSMEQQNFF 179
Query: 179 DKITELAVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFA 234
+ +TE V S VL AL +++TD L L+P T F+AD V+ + N LL
Sbjct: 180 ELVTEACVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLY 236
Query: 235 LMRVVWNLLQNPHIQIEPYL 254
LMR+V LL N + Y+
Sbjct: 237 LMRMVRALLGNQRFSLLQYV 256
>gi|156087741|ref|XP_001611277.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798531|gb|EDO07709.1| conserved hypothetical protein [Babesia bovis]
Length = 633
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 151 NNEQKDGLPVEIKLP-VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT------ 203
N + K+G I +P V+HIL++E Q +F K + V ++ + + Q V L
Sbjct: 248 NTDDKNGKQTAITIPKVEHILTKE-QRFFLKEIKNTVKKASTTMDHQVHVQLGKVLSILR 306
Query: 204 -DSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVV 262
L L+P F E+ + + A+++ + N IQI ++HQL+ ++
Sbjct: 307 KSPALDQLLPELAAFFVAELEQPTGDVE---AILKFAEAITSNTKIQIHYHIHQLVAPLL 363
Query: 263 TCLVAK--RLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQ---TRLTKTLLNALLD 317
++ + + + + + R AK V + + L+ L K +LD
Sbjct: 364 KLMLKQDDKEDIQAINRNLSFRKLAAKTVGNLARALRESNTGLEGIDQYLMKLYKKTILD 423
Query: 318 PKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLL 355
PK ++T YGA+ G+ L R+L P + L++L
Sbjct: 424 PKCSITMLYGAMCGIEQLPLTAKRILYFPMVPLLLNIL 461
>gi|401396226|ref|XP_003879782.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325114189|emb|CBZ49747.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 956
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 148 NGTNNEQKDGLPVEIKLPVK---------HILSRELQLYFDKITEL---AVSRSDSV--- 192
+ + ++KD LP L ++ H L +E Q + + E A+ V
Sbjct: 448 DSEDRDEKDRLPSAWPLSLERILVAPRLCHALGKEHQQFLQAVRETLQAAMEEKHGVDYE 507
Query: 193 -LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIE 251
F++ L +++ GL L+P F A E+ L+ L+R+ +L NPH+ +
Sbjct: 508 RNFRKMLKIVSSIPGLEQLLPCLARFFAVELGGCLHLPHRATLLLRLAEAILANPHLPLH 567
Query: 252 PYLHQLMPSVVTCLV----------------AKRLGNRL---ADNHWELRDFTAKLVAA- 291
++HQ + ++ CL+ A+ + + L ELR A L+ A
Sbjct: 568 SHVHQFLLPLMECLLRPLPLAASSSSPARVPAEPVASALLPFTPQQLELRRQAAHLLGAF 627
Query: 292 ICKRYGH--VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALG 336
+C+ H +++T + L LL P+ +L GAV G+ ALG
Sbjct: 628 LCRARAHREQMESVETAVLLQLKRHLLHPQSSLETVLGAVWGILALG 674
>gi|167521926|ref|XP_001745301.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776259|gb|EDQ89879.1| predicted protein [Monosiga brevicollis MX1]
Length = 141
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 16/130 (12%)
Query: 107 IEAPLPRAPLDTSIVCHWLAIEG-VQPVIPENAP-----VQAIAAPSNGTNNEQKDGLPV 160
+EAP P D + I+G + +P P V+A A +N N +Q+D
Sbjct: 10 LEAPNPSQNEDLQVELDI--IQGNTESAVPTYLPLGDEAVKAAQAMTN-ANQQQQDQEGA 66
Query: 161 EIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ-------ALVSLATDSGLHPLVPY 213
+ +H+LS+E QL + I + A+ R KQ AL SL D GL L+P+
Sbjct: 67 TVVGLSRHLLSKEQQLLYKHIIQGAMMRVGEHNTKQGNQFRENALRSLREDPGLQQLLPF 126
Query: 214 FTYFVADEVS 223
F FVA+E S
Sbjct: 127 FIEFVANEAS 136
>gi|321457768|gb|EFX68848.1| hypothetical protein DAPPUDRAFT_259553 [Daphnia pulex]
Length = 117
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 170 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 227
LS E QLY+ KITE V SD +A SLA+D GLH ++P F+A+ V L+
Sbjct: 60 LSVEQQLYYKKITEKCVC-SDQARRAEAFQSLASDPGLHEMLPRLCTFIAEGVRVNLH 116
>gi|123493108|ref|XP_001326216.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909127|gb|EAY13993.1| hypothetical protein TVAG_491320 [Trichomonas vaginalis G3]
Length = 398
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 69/358 (19%), Positives = 146/358 (40%), Gaps = 39/358 (10%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
SI+P I I+ + L DV +++I+Q A SRR L D+
Sbjct: 6 SIIP------ILDEFEITRIHKQGLIELVDDVNDYLKKILQVAKTIKFQSRRKKLKISDI 59
Query: 62 DEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIV 121
+++L+ +YG+++ + I D+ ++K D++ + P + +
Sbjct: 60 NDSLEFLAELKLYGYSNTSIPSY-IPIPQSDVLLSEEKMTSIDDILRSNSVSVPEEENFT 118
Query: 122 CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDG--LPVEI-------KLPVKHI--L 170
HW I+G PV PE +Q E+K+ +P EI K+ +H +
Sbjct: 119 FHWQLIKGETPVSPE---IQL----------EEKNDQIMPQEIDWKIGNYKIKGRHSEPI 165
Query: 171 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 230
S + + F +I E + ++ ++++ S + L P++ F+ D ++ L +
Sbjct: 166 SNQCKEKFTRIIEQFLENNNENIYEEIEKS----ADARVLAPFYIKFITDFITVNLFDSL 221
Query: 231 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVA 290
++ L N E Y + +T ++ N + +++RD + +
Sbjct: 222 QTERILVFTEALFHNEFFAKEVYSNSFFSIALTLAISPEHFN--GAHCFDIRDEASIFLE 279
Query: 291 AICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
I + + ++ + K LN +L Q YG ++ + A+ N + +++P +
Sbjct: 280 EIIQYFSKFNPFIKENILKR-LNMMLSTNN-YQQRYGLLRCIFAISQNTFKSIIIPKI 335
>gi|383864423|ref|XP_003707678.1| PREDICTED: uncharacterized protein LOC100879608 [Megachile
rotundata]
Length = 478
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++ + + I + +G+ + LA D YR+RE++ + + ++HS+R LT+ DV
Sbjct: 38 AVLSTDWISAIGEELGMHSLPDSLLRRLAEDASYRLREVLHKCVTRLKHSKRKRLTSTDV 97
Query: 62 DEAL-KLRNVEPVYGFASGGP 81
+ + L +++P+ G + P
Sbjct: 98 NAVITNLCDIDPILGASESMP 118
>gi|345493582|ref|XP_003427099.1| PREDICTED: hypothetical protein LOC100680291 [Nasonia vitripennis]
Length = 514
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++ + V I + +G+ LA D YR+RE++ + +RHS+R LT++DV
Sbjct: 40 AVLSTDWVSAIGEELGMHPLPDTLVRKLAEDASYRLREVLHKCATRLRHSKRRRLTSNDV 99
Query: 62 DEAL-KLRNVEPVYG 75
+ + L NV+P G
Sbjct: 100 NAVVTNLCNVDPSIG 114
>gi|332029640|gb|EGI69529.1| hypothetical protein G5I_01819 [Acromyrmex echinatior]
Length = 493
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++ E V I + +G+ LA D YR+RE++ + + +RHS+R LT+ DV
Sbjct: 40 AMLSTEWVSAIGEELGMHPLPDPLLKRLAEDASYRLREVLHKCVTRLRHSKRKRLTSMDV 99
Query: 62 DEAL-KLRNVEPVYG 75
+ + L + +PV+G
Sbjct: 100 NAVITSLCDADPVFG 114
>gi|428672325|gb|EKX73239.1| conserved hypothetical protein [Babesia equi]
Length = 624
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 23/135 (17%)
Query: 21 FSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTT----DDVDEALKLRNVEPVYGF 76
S +AA +A VE+RI++I+Q A K + HS R T+ DV AL+ +E + G+
Sbjct: 17 LSPEAAELIANTVEFRIKQIVQMARKFLIHSSRPAQTSFLLPIDVRNALRTLKIEDLDGY 76
Query: 77 ASGGPLRF-------------RRAIGYRDLFYLDDK---DVEFKDVIEAPLPRA-PLDTS 119
++ R+ +R YR+ L DK D+I+ + +A P
Sbjct: 77 SNCYDYRYVCSTKLFKGDRVIKRESCYRN--SLGDKCWGRYRLSDIIQQDMQKAVPAAPG 134
Query: 120 IVCHWLAIEGVQPVI 134
+ HW+ + G P I
Sbjct: 135 LTVHWMVVNGRVPTI 149
>gi|189238203|ref|XP_001809288.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
Length = 504
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 139/354 (39%), Gaps = 79/354 (22%)
Query: 13 AQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEP 72
A+ + + S D LA D+ YR+R I+ + + R R +++ D+++ ++
Sbjct: 66 AEQTAVEHLSEDITNTLAEDINYRLRYIINDCLIKARLCGRNAISSSDLEQTFDNLRIDR 125
Query: 73 VYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQP 132
VYG A P A + L L+DK+V D+ DT + +P
Sbjct: 126 VYG-APSHPNWL--AFSDQSLLCLEDKEVNLLDLAHEQ------DT-------YYQYYEP 169
Query: 133 VIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV 192
VI + LP + LS+ L+ YF + ++ VS SD
Sbjct: 170 VITTSW-------------------------LPEQKELSKALKNYFSTMCQMVVS-SDIE 203
Query: 193 LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEP 252
+ K L ++ + + P++ +F F +S+ + L + ++ L +P +I
Sbjct: 204 IRKMVLTNIGENPRIGPIIEWFYNFGYILLSKDITYDCLTLRALDLIRVLENSPMCRIHV 263
Query: 253 -----------YLHQLMPSVVTCLVAKRLGNRLA--DNHWELRDFTAKLVAAICKRYGHV 299
L +L+ S T V K + + LA LR+F ++ I ++ V
Sbjct: 264 SEKQLKLLVRLILQRLLKSTTTSEVLKPMCSVLAILSQRGPLREF---IILKIFQKLDEV 320
Query: 300 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 353
++ AL + + +LG + ++ ++LPNL +L+
Sbjct: 321 FDNF-----------------ALP----VITAVNSLGIDAIQSIVLPNLNLFLA 353
>gi|307176992|gb|EFN66298.1| Transcription initiation factor TFIID subunit 6 [Camponotus
floridanus]
Length = 482
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++ E + I + +G+ LA D YR+RE++ + + +RHS+R LT+ DV
Sbjct: 41 AMLSTEWISTIGEELGMHPLPDPLLKRLAEDASYRLREVLHKCVTRLRHSKRRRLTSMDV 100
Query: 62 DEAL-KLRNVEPVYGFASGGP 81
+ A+ L + +P+ G P
Sbjct: 101 NAAITNLCDADPILGAPESMP 121
>gi|350408043|ref|XP_003488283.1| PREDICTED: hypothetical protein LOC100745010 [Bombus impatiens]
Length = 478
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++ + + I + +G+ LA D YR+RE++ + + ++HS+R LT+ DV
Sbjct: 38 AVLSTDWISAIGEELGMHPLPDSLLKRLAEDASYRLREVLHKCVTRLKHSKRKRLTSTDV 97
Query: 62 DEAL-KLRNVEPVYG 75
+ + L +V+PV G
Sbjct: 98 NAVITNLCDVDPVLG 112
>gi|340721844|ref|XP_003399324.1| PREDICTED: hypothetical protein LOC100646072 [Bombus terrestris]
Length = 478
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++ + + I + +G+ LA D YR+RE++ + + ++HS+R LT+ DV
Sbjct: 38 AVLSTDWISAIGEELGMHPLPDSLLKRLAEDASYRLREVLHKCVTRLKHSKRKRLTSTDV 97
Query: 62 DEAL-KLRNVEPVYG 75
+ + L +V+PV G
Sbjct: 98 NAVITNLCDVDPVLG 112
>gi|325959658|ref|YP_004291124.1| transcription factor CBF/NF-Y/histone domain-containing protein
[Methanobacterium sp. AL-21]
gi|325331090|gb|ADZ10152.1| Transcription factor CBF/NF-Y/histone domain-containing protein
[Methanobacterium sp. AL-21]
Length = 68
Score = 42.0 bits (97), Expect = 0.75, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M+ +P V I ++ G S DA ALA +E + EI ++A++ +H+ R T+ DD
Sbjct: 1 MAELPIAPVGRIIKNAGAQRISDDAKEALAKSLEEKGEEIAKKAVELAKHAGRKTVKADD 60
Query: 61 VDEALK 66
+D A+K
Sbjct: 61 IDMAVK 66
>gi|449662645|ref|XP_004205586.1| PREDICTED: uncharacterized protein LOC101237825 [Hydra
magnipapillata]
Length = 281
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 201 LATDSGLHPLVPYFTYFVADEV--SRGLNNYSLLFALMRVVWN-LLQNPHIQIEPYLHQL 257
L +++ L ++P+ F+ ++ + ++S + + + N L++N + + PY+ +L
Sbjct: 3 LRSNNKLQVVLPHLITFLCSKIKLTTAKKSFSSVLGFVLLAINALIENDSVLLVPYIFEL 62
Query: 258 MPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD 317
M SV+ +V + +L W + A ++ IC +Y ++ L +L K +LN L
Sbjct: 63 MKSVL--IVVSDV--KLCVEEWNIHHTAAFVLVKICSKYSVIHPNLLYQLLK-MLNEKLT 117
Query: 318 PKRALTQHYGAVQGLAALGPNVVRLLLLPNL 348
+ +G + + +G + LLP+L
Sbjct: 118 SALPIESLFGVISSIKFMGYKAINEALLPHL 148
>gi|307191863|gb|EFN75287.1| hypothetical protein EAI_03110 [Harpegnathos saltator]
Length = 515
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
++V E + I + +G+ LA D YR+RE++ + + +RHS++ L + DV
Sbjct: 36 AMVSTEWISAIGEELGMHPLPDPLLKRLAEDASYRLREVLHKCVTRLRHSKKRRLMSTDV 95
Query: 62 DEAL-KLRNVEPVYG 75
+ + L + +PV G
Sbjct: 96 NAVITSLCDTDPVLG 110
>gi|328786900|ref|XP_003250853.1| PREDICTED: hypothetical protein LOC100576176 [Apis mellifera]
Length = 478
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 2 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDV 61
+++ + + I + +G+ LA D YR+RE++ + + ++HS+R LT+ DV
Sbjct: 38 AVLSTDWISSIGEELGMYPLPDSLLKRLAEDASYRLREVLYKCVTRLKHSKRKRLTSMDV 97
Query: 62 DEAL-KLRNVEPVYGFASGGP 81
+ + L +V+P+ G P
Sbjct: 98 NAVITNLCDVDPILGAPESMP 118
>gi|126178784|ref|YP_001046749.1| transcription factor CBF/NF-Y histone [Methanoculleus marisnigri
JR1]
gi|125861578|gb|ABN56767.1| archaeal histone [Methanoculleus marisnigri JR1]
Length = 68
Score = 41.2 bits (95), Expect = 1.4, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M+ +P V IA+ G +DAA AL E I E+ +EA + +H+ R T+ +D
Sbjct: 1 MADLPIAAVVRIAKKNGAERVGSDAAAALVTKAEAYIAELTKEANRLAQHAGRKTIKAED 60
Query: 61 VDEALK 66
VD A+K
Sbjct: 61 VDLAVK 66
>gi|380478181|emb|CCF43741.1| hypothetical protein CH063_13360 [Colletotrichum higginsianum]
Length = 66
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 7 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCM 48
+ V+ +A+S+GI N DA L DVEYRI +++ EA++ M
Sbjct: 14 DNVKDVAESVGIPNLHDDALRCLTQDVEYRIGQVLVEALRFM 55
>gi|333986916|ref|YP_004519523.1| transcription factor CBF/NF-Y/histone domain-containing protein
[Methanobacterium sp. SWAN-1]
gi|333825060|gb|AEG17722.1| Transcription factor CBF/NF-Y/histone domain-containing protein
[Methanobacterium sp. SWAN-1]
Length = 68
Score = 40.0 bits (92), Expect = 3.4, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M+ +P V I ++ G S DA ALA +E + EI ++A++ +H+ R T+ DD
Sbjct: 1 MAELPIAPVGRIIKNAGAQRISDDAKEALAKSLEEQGEEIAKKAVELAKHAGRKTVKADD 60
Query: 61 VDEALK 66
++ A+K
Sbjct: 61 IEMAVK 66
>gi|84489328|ref|YP_447560.1| histone [Methanosphaera stadtmanae DSM 3091]
gi|84372647|gb|ABC56917.1| archaeal histone [Methanosphaera stadtmanae DSM 3091]
Length = 66
Score = 39.7 bits (91), Expect = 4.6, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS +P + I ++ G + S DA +ALA ++E EI +AI +H+ R T+ +D
Sbjct: 1 MSELPHAPISRIIKNAGAARVSDDAVVALAEELEVIGEEIASQAILLAKHAGRKTVKAED 60
Query: 61 VDEALK 66
+ A+K
Sbjct: 61 IALAMK 66
>gi|148642904|ref|YP_001273417.1| histone, HmtA [Methanobrevibacter smithii ATCC 35061]
gi|222445137|ref|ZP_03607652.1| hypothetical protein METSMIALI_00758 [Methanobrevibacter smithii
DSM 2375]
gi|261350295|ref|ZP_05975712.1| conserved domain protein [Methanobrevibacter smithii DSM 2374]
gi|148551921|gb|ABQ87049.1| histone, HmtA [Methanobrevibacter smithii ATCC 35061]
gi|222434702|gb|EEE41867.1| DNA-binding protein HMf-1 [Methanobrevibacter smithii DSM 2375]
gi|288861079|gb|EFC93377.1| conserved domain protein [Methanobrevibacter smithii DSM 2374]
Length = 66
Score = 39.3 bits (90), Expect = 4.6, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS +P V I ++ G S DA +ALA +E + I Q+A+ RH+ R T+ +D
Sbjct: 1 MSELPIAPVGRILKNAGAQRISDDAKIALAEALEEKGDAIAQKAVNFARHAGRKTVKAED 60
Query: 61 VDEALK 66
+ A+K
Sbjct: 61 IKLAIK 66
>gi|156049581|ref|XP_001590757.1| predicted protein [Sclerotinia sclerotiorum 1980]
gi|154692896|gb|EDN92634.1| predicted protein [Sclerotinia sclerotiorum 1980 UF-70]
Length = 138
Score = 39.3 bits (90), Expect = 5.0, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+ K + +A+ G+ S + ++ R+ E++++ + + HS+R T+T +DV
Sbjct: 61 ITKGDIRRLARRGGVKRISALIYHDVREAIKARLNEVLRDCVAIVEHSKRKTVTANDVIW 120
Query: 64 ALKLRNVEPVYGF 76
AL+ R P+YGF
Sbjct: 121 ALR-RQGRPIYGF 132
>gi|410670414|ref|YP_006922785.1| histone [Methanolobus psychrophilus R15]
gi|409169542|gb|AFV23417.1| histone [Methanolobus psychrophilus R15]
Length = 70
Score = 39.3 bits (90), Expect = 5.6, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M+I+P +E + ++ G S AA+AL +E E+ +EAIK H+ R T+ +D
Sbjct: 1 MTIIPFAPIERVIRNAGAQRVSESAAMALTEMLESYGLEVSREAIKLAEHAGRKTVKAED 60
Query: 61 VDEALKL 67
+ A ++
Sbjct: 61 IKLAREM 67
>gi|154303599|ref|XP_001552206.1| predicted protein [Botryotinia fuckeliana B05.10]
gi|347838082|emb|CCD52654.1| hypothetical protein [Botryotinia fuckeliana]
Length = 138
Score = 39.3 bits (90), Expect = 5.8, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+ K + +A+ G+ S+ + ++ R+ +++++ + + HS+R T+T +DV
Sbjct: 62 ITKGDIRRLARRGGVKRISSMIYGDVREAIKSRLNDVLKDCVALVEHSKRKTVTVNDVIW 121
Query: 64 ALKLRNVEPVYGF 76
AL+ R P+YGF
Sbjct: 122 ALR-RQGRPIYGF 133
>gi|307103584|gb|EFN51843.1| hypothetical protein CHLNCDRAFT_139708 [Chlorella variabilis]
Length = 151
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 200 SLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMR 237
SLATD GL P++PY +ADEV R L + L ++R
Sbjct: 114 SLATDPGLQPVLPYLVPLLADEVGRNLKDVQQLRVVLR 151
>gi|116753348|ref|YP_842466.1| transcription factor [Methanosaeta thermophila PT]
gi|116664799|gb|ABK13826.1| archaeal histone [Methanosaeta thermophila PT]
Length = 75
Score = 39.3 bits (90), Expect = 5.9, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M+++P V + + G S DA++ LA +E EI +EAI H++R T+ +D
Sbjct: 1 MAVLPVAPVARLIRMAGAKRVSEDASIELASILENYGIEIAKEAIDWANHAKRKTVRAED 60
Query: 61 VDEALK-LRNVEP 72
+ EA K +R ++P
Sbjct: 61 IKEAAKRVRPLKP 73
>gi|312137142|ref|YP_004004479.1| archaeal histone [Methanothermus fervidus DSM 2088]
gi|1346303|sp|P48781.1|HMFA_METFE RecName: Full=DNA-binding protein HMf-1; AltName: Full=Archaeal
histone A
gi|157831392|pdb|1HTA|A Chain A, Crystal Structure Of The Histone Hmfa From
Methanothermus Fervidus
gi|149794|gb|AAA73366.1| histone Hmf1 [Methanothermus fervidus]
gi|311224861|gb|ADP77717.1| archaeal histone [Methanothermus fervidus DSM 2088]
Length = 69
Score = 38.9 bits (89), Expect = 6.3, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M +P + I ++ G S DA +ALA +E EI EA+K +H+ R T+ +D
Sbjct: 1 MGELPIAPIGRIIKNAGAERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAED 60
Query: 61 VDEALKL 67
++ A K+
Sbjct: 61 IELARKM 67
>gi|288560942|ref|YP_003424428.1| archaeal histone [Methanobrevibacter ruminantium M1]
gi|288543652|gb|ADC47536.1| archaeal histone [Methanobrevibacter ruminantium M1]
Length = 66
Score = 38.9 bits (89), Expect = 7.5, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS +P V I ++ G S DA +ALA +E + E+ ++A+ RH+ R T+ +D
Sbjct: 1 MSELPIAPVGRILKNAGAQRISDDAKVALAEALEEKGDELAKKAVNFARHAGRKTVKAED 60
Query: 61 VDEALK 66
+ A+K
Sbjct: 61 IKLAIK 66
>gi|6980541|pdb|1B6W|A Chain A, Crystal Structure Of The Selenomethionine Variant Of
Histone Hmfb From Methanothermus Fervidus
Length = 69
Score = 38.9 bits (89), Expect = 7.8, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P + I + G S DA + LA +E R+I EAIK RH+ R T+ +D++
Sbjct: 3 LPIAPIGRIIKDAGAERVSDDARITLAKILEEXGRDIASEAIKLARHAGRKTIKAEDIEL 62
Query: 64 ALK 66
A++
Sbjct: 63 AVR 65
>gi|409096768|ref|ZP_11216792.1| histone B [Thermococcus zilligii AN1]
Length = 67
Score = 38.5 bits (88), Expect = 7.9, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M+ +P V+ + + G + S DAA ALA +E + EI ++A+ H+ R T+ +D
Sbjct: 1 MAELPIAPVDRLIRKAGAARVSEDAAKALAEHLEEKAIEIAKKAVDLAHHAGRKTVKAED 60
Query: 61 VDEALK 66
+ ALK
Sbjct: 61 IKLALK 66
>gi|432331678|ref|YP_007249821.1| histones H3 and H4 [Methanoregula formicicum SMSP]
gi|432138387|gb|AGB03314.1| histones H3 and H4 [Methanoregula formicicum SMSP]
Length = 68
Score = 38.5 bits (88), Expect = 8.3, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M+ +P V IA+ G +DAA AL E I ++ +EA K H+ R T+ +D
Sbjct: 1 MADLPIAAVVRIAKKNGAERVGSDAAEALVAKAEKYIAQLTKEANKLAEHAGRKTIKKED 60
Query: 61 VDEALK 66
VD A K
Sbjct: 61 VDLASK 66
>gi|327401255|ref|YP_004342094.1| transcription factor CBF/NF-Y/histone domain-containing protein
[Archaeoglobus veneficus SNP6]
gi|327316763|gb|AEA47379.1| Transcription factor CBF/NF-Y/histone domain-containing protein
[Archaeoglobus veneficus SNP6]
Length = 67
Score = 38.5 bits (88), Expect = 8.7, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
MS +P V+ + + G S DA + +E R E+ ++A++ RH+ RTT+ +D
Sbjct: 1 MSELPFAPVDRLIRKAGAERVSADAVEKMTEILEERALEVARKAVEIARHAGRTTVKAED 60
Query: 61 VDEALKL 67
+ A+K+
Sbjct: 61 IKLAMKM 67
>gi|312137410|ref|YP_004004747.1| archaeal histone [Methanothermus fervidus DSM 2088]
gi|123365|sp|P19267.1|HMFB_METFE RecName: Full=DNA-binding protein HMf-2; AltName: Full=Archaeal
histone B
gi|1310900|pdb|1BFM|A Chain A, Histone B From Methanothermus Fervidus
gi|1310901|pdb|1BFM|B Chain B, Histone B From Methanothermus Fervidus
gi|157829727|pdb|1A7W|A Chain A, Crystal Structure Of The Histone Hmfb From
Methanothermus Fervidus
gi|149790|gb|AAA72080.1| DNA-binding protein [Methanothermus fervidus]
gi|311225129|gb|ADP77985.1| archaeal histone [Methanothermus fervidus DSM 2088]
Length = 69
Score = 38.5 bits (88), Expect = 9.4, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 4 VPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDE 63
+P + I + G S DA + LA +E R+I EAIK RH+ R T+ +D++
Sbjct: 3 LPIAPIGRIIKDAGAERVSDDARITLAKILEEMGRDIASEAIKLARHAGRKTIKAEDIEL 62
Query: 64 ALK 66
A++
Sbjct: 63 AVR 65
>gi|15679690|ref|NP_276807.1| histone HMtA2 [Methanothermobacter thermautotrophicus str. Delta
H]
gi|3334220|sp|O27731.3|HMT2_METTH RecName: Full=DNA-binding protein HMt-1.2; AltName: Full=Archaeal
histone A2
gi|2622827|gb|AAB86168.1| histone HMtA2 [Methanothermobacter thermautotrophicus str. Delta
H]
Length = 68
Score = 38.5 bits (88), Expect = 9.4, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 1 MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60
M+ +P V I ++ G S DA ALA +E + EI +EA+K +H+ R T+ D
Sbjct: 1 MAELPIAPVGRIIKNAGAQRISDDAREALAKILEEKGEEIAKEAVKLAKHAGRKTVKASD 60
Query: 61 VDEALK 66
++ A K
Sbjct: 61 IELAAK 66
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,620,513,073
Number of Sequences: 23463169
Number of extensions: 370055498
Number of successful extensions: 1092558
Number of sequences better than 100.0: 625
Number of HSP's better than 100.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 1089907
Number of HSP's gapped (non-prelim): 928
length of query: 542
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 394
effective length of database: 8,886,646,355
effective search space: 3501338663870
effective search space used: 3501338663870
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)