Query 009149
Match_columns 542
No_of_seqs 230 out of 1729
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 19:55:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009149.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009149hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 2E-100 8E-105 830.4 56.3 492 26-535 1-542 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.9E-96 7E-101 793.6 51.1 468 25-534 64-564 (580)
3 1zpu_A Iron transport multicop 100.0 2E-95 7E-100 786.1 53.7 471 27-532 1-501 (534)
4 1v10_A Laccase; multicopper bl 100.0 9E-96 3E-100 788.0 49.4 476 24-539 19-516 (521)
5 3t6v_A Laccase; beta barrel, o 100.0 3E-95 1E-99 775.8 49.4 466 29-535 5-492 (495)
6 3pxl_A Laccase; 4-copper prote 100.0 1.2E-94 4.2E-99 771.0 51.2 467 29-538 4-495 (499)
7 1hfu_A Laccase 1; oxidoreducta 100.0 3.3E-93 1.1E-97 765.5 49.0 462 30-537 6-493 (503)
8 2q9o_A Laccase-1; multicopper 100.0 2E-92 6.9E-97 767.4 51.5 476 25-536 30-545 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 4.3E-87 1.5E-91 707.2 41.7 404 23-512 11-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 3.6E-86 1.2E-90 701.1 35.5 403 27-515 17-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 6.5E-84 2.2E-88 695.2 41.3 417 28-515 36-477 (534)
12 3zx1_A Oxidoreductase, putativ 100.0 2.2E-83 7.6E-88 679.9 42.8 408 23-512 45-480 (481)
13 2wsd_A Spore coat protein A; o 100.0 1.5E-82 5.3E-87 684.2 40.5 428 26-514 23-511 (513)
14 3gyr_A PHS, phenoxazinone synt 100.0 9.7E-82 3.3E-86 696.2 39.3 446 21-516 25-594 (612)
15 3aw5_A Multicopper oxidase; be 100.0 8.6E-82 3E-86 666.5 33.3 389 28-512 20-448 (448)
16 3od3_A Blue copper oxidase CUE 100.0 5.3E-81 1.8E-85 661.2 37.4 412 26-511 15-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 3.8E-79 1.3E-83 662.7 42.9 440 25-514 29-592 (612)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 3.3E-53 1.1E-57 489.6 39.9 389 22-448 15-488 (1065)
19 3g5w_A Multicopper oxidase typ 100.0 2.1E-53 7.1E-58 429.9 30.9 265 27-298 1-278 (318)
20 2r7e_A Coagulation factor VIII 100.0 3.7E-55 1.3E-59 486.8 11.5 237 30-280 48-314 (742)
21 2zwn_A Two-domain type laccase 100.0 7.2E-52 2.5E-56 423.1 32.1 265 27-298 2-279 (339)
22 2dv6_A Nitrite reductase; elec 100.0 4.2E-51 1.4E-55 434.3 27.5 403 20-516 20-436 (447)
23 3kw8_A Laccase, putative coppe 100.0 9.2E-50 3.1E-54 396.0 25.7 244 24-516 3-268 (276)
24 1kbv_A ANIA, major outer membr 100.0 4.6E-49 1.6E-53 400.4 30.6 260 23-299 33-310 (327)
25 3tas_A Small laccase, multi-co 100.0 4.4E-49 1.5E-53 397.9 24.9 245 24-517 9-275 (313)
26 3t9w_A Small laccase, multi-co 100.0 4.1E-49 1.4E-53 395.1 24.1 250 19-516 20-290 (299)
27 3gdc_A Multicopper oxidase; be 100.0 1.7E-47 5.8E-52 382.0 29.3 232 27-280 33-273 (288)
28 3cg8_A Laccase; oxidoreductase 100.0 4E-47 1.4E-51 387.7 25.7 242 25-515 45-308 (343)
29 2j5w_A Ceruloplasmin, ferroxid 100.0 2E-47 6.9E-52 441.4 20.6 387 45-515 616-1060(1065)
30 2zoo_A Probable nitrite reduct 100.0 1.2E-45 4.1E-50 391.5 30.7 267 21-299 21-300 (442)
31 1mzy_A Copper-containing nitri 100.0 2.3E-45 8E-50 374.8 25.8 268 22-299 26-321 (333)
32 1oe1_A Dissimilatory copper-co 100.0 1.6E-44 5.6E-49 369.1 26.3 266 24-299 28-321 (336)
33 2bw4_A Copper-containing nitri 100.0 1.3E-44 4.4E-49 370.5 24.3 267 23-299 33-327 (340)
34 1sdd_B Coagulation factor V; c 100.0 4.2E-40 1.4E-44 364.2 26.3 248 25-280 3-312 (647)
35 2dv6_A Nitrite reductase; elec 100.0 6.8E-39 2.3E-43 340.3 31.9 255 26-298 161-435 (447)
36 1sdd_A Coagulation factor V; c 100.0 1.5E-41 5.2E-46 341.9 7.2 212 48-280 50-285 (306)
37 2r7e_B Coagulation factor VIII 100.0 5.1E-40 1.7E-44 365.8 12.4 247 25-280 130-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 2.2E-36 7.5E-41 336.1 4.8 215 55-280 448-696 (742)
39 3gdc_A Multicopper oxidase; be 100.0 1.3E-30 4.3E-35 260.0 15.9 230 190-512 54-287 (288)
40 2zwn_A Two-domain type laccase 100.0 1.6E-29 5.5E-34 257.9 18.8 245 190-514 23-278 (339)
41 3g5w_A Multicopper oxidase typ 100.0 8.3E-30 2.8E-34 257.3 15.9 247 191-515 23-278 (318)
42 1sdd_A Coagulation factor V; c 99.9 2.8E-25 9.5E-30 223.3 2.5 232 193-514 52-301 (306)
43 1kbv_A ANIA, major outer membr 99.9 1.9E-22 6.4E-27 204.6 17.7 246 190-514 58-308 (327)
44 1sdd_B Coagulation factor V; c 99.9 1.5E-22 5.1E-27 223.8 18.1 245 196-515 63-329 (647)
45 2bw4_A Copper-containing nitri 99.9 5E-22 1.7E-26 202.9 19.5 258 189-515 58-326 (340)
46 1mzy_A Copper-containing nitri 99.9 1.5E-20 5.1E-25 191.3 20.6 259 190-515 52-320 (333)
47 2r7e_B Coagulation factor VIII 99.9 7.8E-23 2.7E-27 227.8 3.5 245 200-515 197-458 (770)
48 2zoo_A Probable nitrite reduct 99.8 7.1E-20 2.4E-24 193.6 17.8 248 190-516 48-300 (442)
49 1oe1_A Dissimilatory copper-co 99.8 9.4E-19 3.2E-23 178.3 21.0 256 190-515 53-320 (336)
50 2uxt_A Protein SUFI, SUFI; oxi 99.7 4E-15 1.4E-19 157.1 21.1 233 28-280 152-426 (451)
51 2xu9_A Laccase; oxidoreductase 99.7 3.4E-15 1.2E-19 157.3 20.1 232 28-280 146-425 (439)
52 3cvb_A Plastocyanin; cupredoxi 99.6 1.5E-16 5E-21 133.6 3.7 90 54-147 14-105 (105)
53 1v10_A Laccase; multicopper bl 99.6 1.8E-14 6.3E-19 154.8 19.1 226 47-280 191-476 (521)
54 1hfu_A Laccase 1; oxidoreducta 99.6 4.7E-14 1.6E-18 151.0 21.6 247 30-280 143-455 (503)
55 3kw8_A Laccase, putative coppe 99.6 1.2E-14 4.3E-19 143.4 12.3 100 50-151 157-269 (276)
56 3t6v_A Laccase; beta barrel, o 99.5 2.7E-13 9.2E-18 144.3 17.4 230 47-280 168-456 (495)
57 3zx1_A Oxidoreductase, putativ 99.5 1.2E-12 4E-17 138.6 20.6 238 29-280 181-466 (481)
58 3pxl_A Laccase; 4-copper prote 99.5 1.9E-12 6.4E-17 137.8 20.3 230 47-280 166-456 (499)
59 2cal_A Rusticyanin; iron respi 99.5 2.5E-13 8.7E-18 121.5 11.3 99 43-146 46-154 (154)
60 1zpu_A Iron transport multicop 99.5 6.1E-12 2.1E-16 135.3 23.9 217 47-280 167-466 (534)
61 1iby_A Nitrosocyanin; RED copp 99.4 5.1E-13 1.7E-17 113.3 11.2 105 29-147 2-112 (112)
62 1aoz_A Ascorbate oxidase; oxid 99.4 3.8E-12 1.3E-16 137.8 20.3 202 60-280 205-510 (552)
63 2q9o_A Laccase-1; multicopper 99.4 4E-12 1.4E-16 137.6 19.3 231 47-280 195-506 (559)
64 3od3_A Blue copper oxidase CUE 99.4 7.6E-12 2.6E-16 132.3 17.6 246 29-280 151-475 (488)
65 3cg8_A Laccase; oxidoreductase 99.4 1.4E-12 4.8E-17 132.5 11.5 104 50-155 198-314 (343)
66 3aw5_A Multicopper oxidase; be 99.4 1.9E-11 6.4E-16 128.8 20.0 225 29-280 138-434 (448)
67 1fwx_A Nitrous oxide reductase 99.3 6.1E-12 2.1E-16 134.6 11.2 94 43-148 497-593 (595)
68 2g23_A PHS, phenoxazinone synt 99.3 1.9E-10 6.6E-15 124.7 22.1 229 48-280 255-576 (612)
69 2wsd_A Spore coat protein A; o 99.2 8.4E-11 2.9E-15 126.1 16.4 215 47-280 230-495 (513)
70 3abg_A Bilirubin oxidase; clea 99.2 6.8E-11 2.3E-15 127.0 15.4 219 47-280 201-460 (534)
71 2ov0_A Amicyanin; beta-sandwic 99.2 5.1E-11 1.7E-15 99.5 10.4 78 53-146 27-105 (105)
72 2aan_A Auracyanin A; cupredoxi 99.2 2.7E-11 9.4E-16 106.7 7.0 94 412-512 36-139 (139)
73 3sqr_A Laccase; multicopper ox 99.2 1.2E-09 4E-14 117.9 20.8 226 47-280 225-529 (580)
74 3cvb_A Plastocyanin; cupredoxi 99.1 4.8E-11 1.6E-15 99.7 6.2 85 412-513 20-105 (105)
75 2gim_A Plastocyanin; beta shee 99.1 2.3E-10 8E-15 95.6 8.7 83 58-147 19-106 (106)
76 3tas_A Small laccase, multi-co 99.0 4.4E-10 1.5E-14 112.7 9.4 93 202-296 174-271 (313)
77 3gyr_A PHS, phenoxazinone synt 99.0 1.4E-08 4.9E-13 111.4 19.6 89 191-280 459-576 (612)
78 3t9w_A Small laccase, multi-co 99.0 2.4E-09 8.2E-14 106.6 11.8 100 50-150 179-290 (299)
79 2aan_A Auracyanin A; cupredoxi 99.0 2.5E-09 8.4E-14 94.0 10.6 90 55-146 31-139 (139)
80 1qhq_A Protein (auracyanin); e 98.9 1.7E-08 5.9E-13 88.7 12.6 91 56-147 30-140 (140)
81 4hci_A Cupredoxin 1; structura 98.9 8.4E-09 2.9E-13 85.1 9.3 79 53-146 22-100 (100)
82 2gim_A Plastocyanin; beta shee 98.8 6.2E-09 2.1E-13 86.9 7.3 84 412-512 21-105 (106)
83 2plt_A Plastocyanin; electron 98.8 6.9E-09 2.4E-13 85.2 6.4 80 58-146 17-98 (98)
84 3c75_A Amicyanin; copper prote 98.8 2E-08 7E-13 87.2 8.8 77 54-146 55-132 (132)
85 1pcs_A Plastocyanin; electron 98.7 2.7E-08 9.2E-13 81.7 7.8 81 58-146 18-98 (98)
86 1bxv_A Plastocyanin; copper pr 98.7 4E-08 1.4E-12 79.4 8.1 76 56-146 16-91 (91)
87 1qhq_A Protein (auracyanin); e 98.7 3.8E-08 1.3E-12 86.5 8.0 98 413-512 35-139 (140)
88 1b3i_A PETE protein, protein ( 98.6 7.9E-08 2.7E-12 78.7 8.2 77 58-146 18-97 (97)
89 1pcs_A Plastocyanin; electron 98.6 1.3E-07 4.4E-12 77.5 8.9 78 412-512 20-98 (98)
90 2plt_A Plastocyanin; electron 98.6 7.7E-08 2.6E-12 78.9 7.3 79 412-511 19-97 (98)
91 3erx_A Pseudoazurin; copper pr 98.6 1.2E-07 4.1E-12 80.9 8.6 75 58-147 20-94 (123)
92 1kdj_A Plastocyanin; electron 98.6 1.1E-07 3.7E-12 78.6 7.7 77 58-146 16-102 (102)
93 1byp_A Protein (plastocyanin); 98.6 2.3E-07 8E-12 76.1 9.4 77 58-146 16-99 (99)
94 1plc_A Plastocyanin; electron 98.6 2.3E-07 7.9E-12 76.2 9.4 77 58-146 16-99 (99)
95 1bxv_A Plastocyanin; copper pr 98.6 1.7E-07 5.8E-12 75.6 8.2 71 412-511 20-90 (91)
96 3tu6_A Pseudoazurin (blue copp 98.5 1.3E-07 4.4E-12 81.2 7.0 77 58-149 22-98 (127)
97 3ef4_A Pseudoazurin, blue copp 98.5 2.3E-07 7.9E-12 79.1 7.8 76 58-148 21-96 (124)
98 1iby_A Nitrosocyanin; RED copp 98.5 4.6E-07 1.6E-11 76.2 8.7 74 412-513 39-112 (112)
99 1b3i_A PETE protein, protein ( 98.4 1.2E-07 4.1E-12 77.6 3.9 77 412-511 20-96 (97)
100 3ay2_A Lipid modified azurin p 98.4 5.5E-07 1.9E-11 80.7 8.3 92 55-147 54-167 (167)
101 1byp_A Protein (plastocyanin); 98.4 5E-07 1.7E-11 74.1 6.2 81 412-511 18-98 (99)
102 4hci_A Cupredoxin 1; structura 98.3 1.8E-06 6.1E-11 71.0 8.7 71 413-512 30-100 (100)
103 1iuz_A Plastocyanin; electron 98.3 8.9E-07 3.1E-11 72.5 6.7 79 56-146 15-98 (98)
104 1paz_A Pseudoazurin precursor; 98.3 2.2E-06 7.7E-11 73.1 8.6 76 58-148 20-95 (123)
105 1cuo_A Protein (azurin ISO-2); 98.2 6.6E-06 2.3E-10 70.7 10.8 92 55-147 14-129 (129)
106 1pmy_A Pseudoazurin; electron 98.2 2.5E-06 8.4E-11 72.8 7.5 76 58-148 20-95 (123)
107 1id2_A Amicyanin; beta barrel, 98.2 6.9E-06 2.4E-10 68.2 9.9 76 55-146 30-106 (106)
108 1kdj_A Plastocyanin; electron 98.2 1.6E-06 5.6E-11 71.4 6.0 84 412-512 18-102 (102)
109 1plc_A Plastocyanin; electron 98.0 6.5E-06 2.2E-10 67.4 5.9 81 412-511 18-98 (99)
110 2ccw_A Azurin II, AZN-2; elect 98.0 3.4E-05 1.2E-09 66.2 10.6 92 55-147 14-129 (129)
111 2ux6_A Pseudoazurin; type-1 co 98.0 1.4E-05 4.8E-10 68.1 7.4 74 58-148 20-93 (122)
112 3sbq_A Nitrous-oxide reductase 98.0 2.8E-05 9.7E-10 81.6 11.0 88 48-148 547-638 (638)
113 1nwp_A Azurin; electron transp 97.9 4.9E-05 1.7E-09 65.1 10.0 91 55-146 14-128 (128)
114 2iaa_C Azurin; quinoprotein, t 97.9 5.6E-05 1.9E-09 64.7 10.3 92 55-147 13-128 (128)
115 2cal_A Rusticyanin; iron respi 97.9 2.1E-05 7.1E-10 69.9 7.6 83 411-511 61-153 (154)
116 2ov0_A Amicyanin; beta-sandwic 97.9 3.2E-05 1.1E-09 64.0 7.7 71 412-511 34-104 (105)
117 1fwx_A Nitrous oxide reductase 97.9 3.6E-05 1.2E-09 82.5 9.8 74 412-514 514-593 (595)
118 3fsa_A Azurin; copper, cupredo 97.3 0.0013 4.5E-08 55.5 9.5 88 55-146 14-125 (125)
119 1id2_A Amicyanin; beta barrel, 97.1 0.0013 4.4E-08 54.2 7.7 71 412-511 35-105 (106)
120 3ef4_A Pseudoazurin, blue copp 97.1 0.00099 3.4E-08 56.5 6.9 75 412-515 23-97 (124)
121 1iuz_A Plastocyanin; electron 97.1 0.00087 3E-08 54.4 6.1 79 412-511 19-97 (98)
122 3tu6_A Pseudoazurin (blue copp 97.0 0.00098 3.3E-08 56.9 5.8 75 412-515 24-98 (127)
123 3c75_A Amicyanin; copper prote 96.9 0.002 6.9E-08 55.4 7.7 71 412-511 61-131 (132)
124 3erx_A Pseudoazurin; copper pr 96.9 0.0027 9.4E-08 53.7 8.1 73 412-513 22-94 (123)
125 2cua_A Protein (CUA); CUA cent 96.7 0.0071 2.4E-07 52.1 9.4 73 59-147 60-135 (135)
126 3s8f_B Cytochrome C oxidase su 96.5 0.013 4.4E-07 52.3 9.7 81 53-147 87-168 (168)
127 3sbq_A Nitrous-oxide reductase 96.4 0.0096 3.3E-07 62.8 9.5 74 412-512 559-636 (638)
128 1paz_A Pseudoazurin precursor; 96.3 0.017 5.9E-07 48.8 8.8 74 412-514 22-95 (123)
129 1pmy_A Pseudoazurin; electron 96.1 0.012 4.1E-07 49.8 6.8 38 473-514 58-95 (123)
130 2cua_A Protein (CUA); CUA cent 95.7 0.037 1.3E-06 47.5 8.3 72 413-512 62-134 (135)
131 3ay2_A Lipid modified azurin p 95.6 0.029 9.8E-07 50.0 7.5 94 413-512 60-166 (167)
132 1cuo_A Protein (azurin ISO-2); 95.5 0.066 2.3E-06 45.5 9.2 98 412-512 19-128 (129)
133 2ux6_A Pseudoazurin; type-1 co 95.3 0.046 1.6E-06 46.0 7.3 71 412-513 22-92 (122)
134 3s8f_B Cytochrome C oxidase su 94.6 0.13 4.4E-06 45.8 8.6 72 413-512 95-167 (168)
135 3fsa_A Azurin; copper, cupredo 94.5 0.14 4.8E-06 43.0 8.2 95 411-511 18-124 (125)
136 2iaa_C Azurin; quinoprotein, t 94.3 0.097 3.3E-06 44.4 6.8 96 412-512 18-127 (128)
137 2ccw_A Azurin II, AZN-2; elect 93.7 0.18 6.1E-06 42.8 7.4 95 412-512 19-128 (129)
138 1nwp_A Azurin; electron transp 93.1 0.33 1.1E-05 41.1 8.2 97 412-511 19-127 (128)
139 3isy_A Bsupi, intracellular pr 85.5 6.8 0.00023 32.4 9.9 71 208-279 16-101 (120)
140 1cyx_A CYOA; electron transpor 74.0 5.1 0.00017 36.5 5.9 77 412-516 42-120 (205)
141 3hb3_B Cytochrome C oxidase su 72.9 6 0.00021 38.3 6.5 78 412-517 190-268 (298)
142 1cyx_A CYOA; electron transpor 67.0 18 0.00061 32.9 7.9 60 202-280 41-100 (205)
143 2gsm_B Cytochrome C oxidase su 65.6 11 0.00036 35.9 6.5 77 412-516 172-249 (262)
144 2r39_A FIXG-related protein; s 63.6 24 0.00081 28.8 7.5 46 211-266 34-81 (118)
145 1v54_B Cytochrome C oxidase po 55.9 15 0.00053 34.0 5.5 78 411-516 140-218 (227)
146 3hb3_B Cytochrome C oxidase su 52.2 40 0.0014 32.5 8.0 75 59-147 189-264 (298)
147 2gsm_B Cytochrome C oxidase su 50.2 45 0.0016 31.5 7.9 75 59-147 171-246 (262)
148 3isy_A Bsupi, intracellular pr 47.5 1.2E+02 0.004 24.9 12.5 72 48-130 23-100 (120)
149 1yew_A Particulate methane mon 45.2 43 0.0015 33.0 6.8 17 103-119 319-335 (382)
150 1jer_A Cucumber stellacyanin; 45.1 27 0.00091 29.6 4.9 35 115-149 76-110 (138)
151 2f1e_A Protein APAG; APAG prot 44.7 21 0.00072 29.8 4.1 47 70-116 34-86 (127)
152 1xwv_A DER F II; beta sheets, 42.5 49 0.0017 27.4 6.2 62 58-119 24-93 (129)
153 1fft_B Ubiquinol oxidase; elec 42.3 18 0.00062 35.2 3.8 76 413-516 153-230 (315)
154 1xvs_A Protein APAG; MCSG APC2 41.3 21 0.00073 29.7 3.6 55 70-124 33-95 (126)
155 1x9u_A Umecyanin; cupredoxin, 39.0 27 0.00093 28.5 3.9 35 114-149 72-107 (116)
156 1xq4_A Protein APAG; all beta 38.6 28 0.00095 29.5 3.9 55 70-124 38-100 (139)
157 1nep_A EPV20, BNPC2, epididyma 36.1 52 0.0018 27.3 5.3 61 59-119 26-95 (130)
158 1tza_A APAG protein, SOR45; st 35.4 25 0.00085 29.6 3.1 55 70-124 33-95 (134)
159 1v54_B Cytochrome C oxidase po 35.1 80 0.0028 29.0 6.9 76 58-147 139-215 (227)
160 1jer_A Cucumber stellacyanin; 31.8 57 0.0019 27.5 4.8 34 483-516 77-111 (138)
161 2x3c_A Toxic extracellular end 31.2 1.8E+02 0.0061 28.5 9.1 31 249-279 92-127 (343)
162 2r5o_A Putative ATP binding co 31.1 1.5E+02 0.0051 26.0 7.9 85 192-280 53-146 (188)
163 1x9u_A Umecyanin; cupredoxin, 29.6 51 0.0017 26.9 4.0 34 482-515 73-107 (116)
164 2qjv_A Uncharacterized IOLB-li 26.9 3E+02 0.01 25.9 9.4 71 204-279 34-111 (270)
165 3rfr_A PMOB; membrane, oxidore 26.6 1.3E+02 0.0045 29.9 6.9 75 68-144 301-410 (419)
166 2xzz_A Protein-glutamine gamma 26.3 83 0.0028 24.9 4.6 51 68-124 23-78 (102)
167 3idu_A Uncharacterized protein 26.1 2.7E+02 0.0093 22.8 10.0 65 205-278 28-95 (127)
168 2yev_B Cytochrome C oxidase su 31.4 15 0.0005 36.3 0.0 76 413-516 143-219 (337)
169 1fft_B Ubiquinol oxidase; elec 25.0 79 0.0027 30.7 5.1 59 203-280 152-210 (315)
170 2p9r_A Alpha-2-M, alpha-2-macr 24.7 2.4E+02 0.0081 21.6 7.4 68 206-279 13-84 (102)
171 1ws8_A Mavicyanin; oxidized fo 24.5 75 0.0026 25.5 4.1 39 113-152 71-109 (109)
172 2wtp_A ORF131 protein, CZCE; m 24.2 24 0.00081 29.5 1.0 23 202-224 71-93 (131)
173 3e8v_A Possible transglutamina 20.1 2.2E+02 0.0076 21.5 5.6 45 233-277 4-48 (82)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=2.4e-100 Score=830.41 Aligned_cols=492 Identities=28% Similarity=0.508 Sum_probs=394.5
Q ss_pred CCeEEEEEEEEEEEecCCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCC-CCceEEeccccCCCCCCCCCCccc-C
Q 009149 26 DPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLD-EPFLLSWNGIQNRRNSFEDGVYGT-T 103 (542)
Q Consensus 26 ~~~~~~~l~i~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-q 103 (542)
+.+|+|+|+|++..+.+||.++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ |
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 35899999999999999999999999999999999999999999999999997 999999999999998899999999 9
Q ss_pred CCCCCCCeEEEEEEECCCceeeeEecchhhhhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchhhHHHhhcc
Q 009149 104 CPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDK 183 (542)
Q Consensus 104 ~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~ 183 (542)
|+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.....++ ..|+|++|+|+||+++...++...+..
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999997 899999999999999999999999999976544455 336899999999999876655433322
Q ss_pred C--CCCCCCCeEEEcCCCCC-------------------------ceEEEecCcEEEEEEEEcCCCceEEEEEecceeEE
Q 009149 184 G--KKLPLPDGILINGRGSG-------------------------AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKL 236 (542)
Q Consensus 184 ~--~~~~~~~~~liNG~~~~-------------------------~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~v 236 (542)
. .....++.+||||+... +.++|++|++|||||||+|..+.+.|+|+||+|+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v 238 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV 238 (552)
T ss_dssp SSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE
T ss_pred ccccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE
Confidence 1 12245789999999852 17999999999999999999999999999999999
Q ss_pred EeecCcccceeeeeeEEEcCCceEEEEEEe-CCCCcceEEEEeeeec-CCccceEEEEEecCCCCC--CCCCCCCCCc-c
Q 009149 237 VEVEGTHTLQTTYSSLDVHVGQSYSVLVTA-DQPARDYYIVVSSRFT-STVLTTTGILHYSNSAGP--VSGPIPGGPT-V 311 (542)
Q Consensus 237 ia~DG~~~~p~~~~~l~l~pgeR~dv~v~~-~~~~g~y~i~~~~~~~-~~~~~~~ail~y~~~~~~--~~~~~p~~p~-~ 311 (542)
||+||.+++|+.+++|.|+|||||||+|++ ++.+|+|||++..... .+.....|+|+|.+.... +..+.|..|. .
T Consensus 239 i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~ 318 (552)
T 1aoz_A 239 VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWD 318 (552)
T ss_dssp EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTT
T ss_pred EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccc
Confidence 999999999999999999999999999999 4468999999987643 234568899999876531 1111222221 1
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcc
Q 009149 312 QIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGV 391 (542)
Q Consensus 312 ~~~~~~~~~~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~ 391 (542)
+...... ..+. .+....+.+.| ...++++.+.......++...|+|||++|..++.|+|++.+..++++
T Consensus 319 ~~~~~~~--~~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~ 387 (552)
T 1aoz_A 319 DFDRSKN--FTYR-ITAAMGSPKPP--------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHA 387 (552)
T ss_dssp CHHHHHH--HHTT-CCBCTTCCCCC--------SSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTS
T ss_pred ccccccc--cccc-ccccCCCCCCC--------CCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccc
Confidence 1110000 0011 11100011111 23567777655432234567899999999999999988877666666
Q ss_pred eecCCCCC----------CCCCCCccccceEEeccCCcEEEEEEEcCCC------CCCCeeecCcceEEEeecCCCCCCc
Q 009149 392 FRIGSISD----------NPTGGGIYQDTAVMGADYRAFIEIVFQNDED------IIQSYHLNGYQFWVVGMDGGQWTSA 455 (542)
Q Consensus 392 ~~~~~~~~----------~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~------~~HP~HlHG~~F~Vl~~~~g~~~~~ 455 (542)
|+.+.... .+.+...+.++.++.++.|++|+|+|+|.+. ..||||||||+||||+++.|.|++.
T Consensus 388 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~ 467 (552)
T 1aoz_A 388 FDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAE 467 (552)
T ss_dssp SCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGG
T ss_pred cccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcc
Confidence 65332110 0112234566788999999999999999873 4699999999999999998888874
Q ss_pred CCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeEEEeechhhhhcceEEEEEEecCCccccccCCCCCcchhccccC
Q 009149 456 SRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCGKAA 535 (542)
Q Consensus 456 ~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~ 535 (542)
....+|+.+|.|||||.|+++||++|||+|||||.|+|||||++|++.|||+.|.|... +++++|++++.||.++
T Consensus 468 ~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~~C~~~~ 542 (552)
T 1aoz_A 468 EESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACGGTA 542 (552)
T ss_dssp GGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSHHHH
T ss_pred cccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchhhhhccC
Confidence 44568899999999999999999999999999999999999999999999999987532 3667899999999876
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.9e-96 Score=793.60 Aligned_cols=468 Identities=23% Similarity=0.355 Sum_probs=373.4
Q ss_pred CCCeEEEEEEEEEEEecCCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCC-CCceEEeccccCCCCCCCCCCccc-
Q 009149 25 EDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLD-EPFLLSWNGIQNRRNSFEDGVYGT- 102 (542)
Q Consensus 25 ~~~~~~~~l~i~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~- 102 (542)
.+.+++|+|+|++..+.+||.++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||++|.+++++||+|++
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 456899999999999999999999999999999999999999999999999997 899999999999999999999999
Q ss_pred CCCCCCCCeEEEEEEECCCceeeeEecchhhhhhcceeeEEEEeCCCCCCCCCCCCCCCe-EEEEEeeeccchhhHHHhh
Q 009149 103 TCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDY-TVLIGDWYKSNHTDLRAHL 181 (542)
Q Consensus 103 q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~ 181 (542)
||||+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.. .+| |.|. +|+|+||+++...++....
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~~y---D~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPAT--ADY---DEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCccc--CCC---CccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999997 6899999999999999999999999998653 345 7787 8999999999877665443
Q ss_pred ccCCCCCCCCeEEEcCCCC----------------CceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccc
Q 009149 182 DKGKKLPLPDGILINGRGS----------------GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTL 245 (542)
Q Consensus 182 ~~~~~~~~~~~~liNG~~~----------------~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~ 245 (542)
.. ...+.++.+||||+.. .+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++
T Consensus 218 ~~-~~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~ 296 (580)
T 3sqr_A 218 RL-GAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIV 296 (580)
T ss_dssp TT-SCCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEE
T ss_pred hc-cCCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCC
Confidence 32 2356789999999964 368999999999999999999999999999999999999999999
Q ss_pred eeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeeeecC----CccceEEEEEecCCCCCCCCCCCCCCcccccccccccc
Q 009149 246 QTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTS----TVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQAR 321 (542)
Q Consensus 246 p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~ 321 (542)
|+.+++|.|+|||||||+|++++.+|+|||++.....+ ......|||+|.++... .|..+..... ..+.
T Consensus 297 P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~~~~~~~---~~~~ 369 (580)
T 3sqr_A 297 PYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTSVGTTPR---GTCE 369 (580)
T ss_dssp EEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCCCCCCCC---CCSC
T ss_pred ceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCC----CCCCCCCCcc---chhh
Confidence 99999999999999999999998889999999875422 13468999999876421 1111100000 0111
Q ss_pred ccc-cCCCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeec-CCCCchhhhcccccCcceecCCCCC
Q 009149 322 SIR-SNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFI-PADTPLKLADYFKIGGVFRIGSISD 399 (542)
Q Consensus 322 ~l~-~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~-~~~~p~l~~~~~~~~~~~~~~~~~~ 399 (542)
+.. ..|.+..+.+.|. ....++++.+. .++...|+|||.+|. .++.|+|++.+... .+
T Consensus 370 ~~~~~~L~P~~~~~~~~------~~~~~~~l~~~-----~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~---------~~ 429 (580)
T 3sqr_A 370 DEPVASLVPHLALDVGG------YSLVDEQVSSA-----FTNYFTWTINSSSLLLDWSSPTTLKIFNNE---------TI 429 (580)
T ss_dssp CSCGGGCCBSSCCBCCS------EEEEEEEEEEE-----ESSSEEEEETTBCCCCCTTSCHHHHHHTTC---------CC
T ss_pred cccccccccCCCCCCCC------ccceEEEEEec-----cCCceeEEECCEecccCCCCCchhhhhcCC---------cc
Confidence 110 1233322222121 11223334442 246678999999997 46889877643210 01
Q ss_pred CCCCCCccccceEEecc----CCcEEEEEEEcCC--CCCCCeeecCcceEEEeecCCCCCCcC-CCCCCCCCCCcceEEE
Q 009149 400 NPTGGGIYQDTAVMGAD----YRAFIEIVFQNDE--DIIQSYHLNGYQFWVVGMDGGQWTSAS-RNQYNLRDAVARVTVQ 472 (542)
Q Consensus 400 ~p~~~~~~~~~~~~~~~----~g~~v~~~i~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~-~~~~~~~~p~~rDTv~ 472 (542)
......++.++ .|++|||+|+|.+ .+.||||||||+||||+++.|.|+++. ...+|+.||++|||+.
T Consensus 430 ------~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~ 503 (580)
T 3sqr_A 430 ------FPTEYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAA 503 (580)
T ss_dssp ------CCGGGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEE
T ss_pred ------CCCCcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEE
Confidence 11234455554 6999999999988 789999999999999999999998653 3568999999999999
Q ss_pred eCCCCEEEEEEEecCceeeEEEeechhhhhcceEEEEEEecCCccccccCCCCCc-chhcccc
Q 009149 473 VYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKN-ARLCGKA 534 (542)
Q Consensus 473 vpp~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~ 534 (542)
|+++||++|||++||||.|+|||||++|++.||++.|.+.. ++.. +..++|+. ...|..+
T Consensus 504 v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~-~~i~-~~~~~~~~~~~~C~~~ 564 (580)
T 3sqr_A 504 LPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQ-SSIA-VKMTDTAIFEDTCANW 564 (580)
T ss_dssp ECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESG-GGCC-CCHHHHHHHHHHHHHH
T ss_pred eCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECH-HHHh-hccCCcHHHHHhhHHH
Confidence 99999999999999999999999999999999999998843 3322 23335555 4688654
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-95 Score=786.14 Aligned_cols=471 Identities=22% Similarity=0.321 Sum_probs=370.4
Q ss_pred CeEEEEEEEEEEEecCCC-eeeEEEEEcCCCccceEEEecCCEEEEEEEeCCC-CCceEEeccccCCCCCCCCCCccc-C
Q 009149 27 PYRFFNWNVTYGDIYPLG-VRQRGILINWQFPGPDIHSVTNDNLIINVFNSLD-EPFLLSWNGIQNRRNSFEDGVYGT-T 103 (542)
Q Consensus 27 ~~~~~~l~i~~~~~~~~G-~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~-q 103 (542)
.+++|+|+|++..+.+|| .++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ |
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 368999999999999999 8999999999999999999999999999999998 999999999999988999999999 9
Q ss_pred CCCCCCCeEEEEEEECCCceeeeEecchhhhhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchhhHHHh-hc
Q 009149 104 CPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAH-LD 182 (542)
Q Consensus 104 ~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~-~~ 182 (542)
|+|+||++|+|+|++.+++||||||||.+.|+.+||+|+|||+++.. |+ .+|+|++|+|+||+++...++... +.
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999866999999999999999999999999999753 33 347899999999999987766432 22
Q ss_pred c---CCCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccceeeeeeEEEcCCce
Q 009149 183 K---GKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQS 259 (542)
Q Consensus 183 ~---~~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR 259 (542)
. ....+.++.+||||+.. +.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+++|.|+||||
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~-~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR 235 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN-LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQR 235 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS-CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCE
T ss_pred cccCCCCCCCCceEEECCCCc-eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccce
Confidence 1 22345789999999997 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCC-CcceEEEEeeeec-------CCccceEEEEEecCCCCCCCCCCCCCCcccccccccc-ccccccCCCCC
Q 009149 260 YSVLVTADQP-ARDYYIVVSSRFT-------STVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQ-ARSIRSNLTAS 330 (542)
Q Consensus 260 ~dv~v~~~~~-~g~y~i~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~-~~~l~~~l~~~ 330 (542)
|||+|++++. .++|||++..... .......++|+|.++...+ .+. .... +.. ..+. .+.+.
T Consensus 236 ~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p---~~~-~~~~----~~~~~~~~--~l~p~ 305 (534)
T 1zpu_A 236 YTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALP---TQN-YVDS----IDNFLDDF--YLQPY 305 (534)
T ss_dssp EEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBC---CCC-CCSC----SSCSCCGG--GCCBS
T ss_pred EEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCC---CCC-cccc----cccccccc--cceeC
Confidence 9999999854 5799999875432 1134567999998764211 110 0000 001 1110 12111
Q ss_pred CCCCCCCCCCCccccccceEEEecccccc-cCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCcccc
Q 009149 331 GPRPNPQGSYHYGLINTTKTIRLSSSAGQ-VNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQD 409 (542)
Q Consensus 331 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 409 (542)
...+.+ ...++++.+...... .++...|+|||++|..+++|+|++.+.. +.+. .++. ....+
T Consensus 306 ~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~-----~~~~--~~~~~ 368 (534)
T 1zpu_A 306 EKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQA-----NNSE--IYGSN 368 (534)
T ss_dssp SCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGT-----TCGG--GGCSS
T ss_pred CCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeeccc--Cccc-----CCCc--ccCCC
Confidence 111111 124566666543221 2455679999999999999988765431 1111 0110 11224
Q ss_pred ceEEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCC----------CCCCcCCCCCCCCCCCcceEEEeCCCCEE
Q 009149 410 TAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGG----------QWTSASRNQYNLRDAVARVTVQVYPKSWS 479 (542)
Q Consensus 410 ~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g----------~~~~~~~~~~~~~~p~~rDTv~vpp~g~~ 479 (542)
+.++.++.|++|+|+|+|.+.+.||||||||+||||+++.+ .|++..... ...+|.|||||.|++++|+
T Consensus 369 ~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~-~~~~p~~RDTv~V~pgg~v 447 (534)
T 1zpu_A 369 THTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPA-FPEYPMRRDTLYVRPQSNF 447 (534)
T ss_dssp SCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCC-CCSSCEEESEEEECTTCEE
T ss_pred ceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCcccccc-ccCCCCeeeEEEeCCCCEE
Confidence 67789999999999999999999999999999999999864 444432222 2468999999999999999
Q ss_pred EEEEEecCceeeEEEeechhhhhcceEEEEEEecCCcccccc--CCCCCcc-hhcc
Q 009149 480 AIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDE--YPIPKNA-RLCG 532 (542)
Q Consensus 480 ~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~--~~~p~~~-~~c~ 532 (542)
+|||+|||||.|+|||||++|++.|||+.|.+.. ++.. +. .++|++. +.|.
T Consensus 448 ~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~-~~~~-~~~~~~~p~~~~~~C~ 501 (534)
T 1zpu_A 448 VIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDP-FGIQ-DAHSQQLSENHLEVCQ 501 (534)
T ss_dssp EEEEECCSCEEEEEEECCHHHHHTTCEEEEEECH-HHHH-HCGGGSCCHHHHHHHH
T ss_pred EEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECc-cccc-cccccCCChhHhhhhh
Confidence 9999999999999999999999999999998754 3322 22 4556555 5663
No 4
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=9e-96 Score=788.02 Aligned_cols=476 Identities=24% Similarity=0.330 Sum_probs=370.2
Q ss_pred cCCCeEEEEEEEEEEEecCCCe-eeEEEEEcCCCccceEEEecCCEEEEEEEeCCC-----CCceEEeccccCCCCCCCC
Q 009149 24 AEDPYRFFNWNVTYGDIYPLGV-RQRGILINWQFPGPDIHSVTNDNLIINVFNSLD-----EPFLLSWNGIQNRRNSFED 97 (542)
Q Consensus 24 ~~~~~~~~~l~i~~~~~~~~G~-~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-----~~~~iH~HG~~~~~~~~~D 97 (542)
..+...+|+|+|++..+.+||+ ++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++|
T Consensus 19 ~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~D 98 (521)
T 1v10_A 19 SLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMD 98 (521)
T ss_dssp ---CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGS
T ss_pred hcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccC
Confidence 4456678999999999999999 999999999999999999999999999999998 9999999999998889999
Q ss_pred CCccc-CCCCCCCCeEEEEEEECCCceeeeEecchhhhhhcceeeEEEEeCCCCC-CCCCCCCCCCeEEEEEeeeccchh
Q 009149 98 GVYGT-TCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRI-PVPFPDPAGDYTVLIGDWYKSNHT 175 (542)
Q Consensus 98 Gv~~~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~ 175 (542)
|++++ ||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+|+||+++...
T Consensus 99 Gv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~ 178 (521)
T 1v10_A 99 GPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLST 178 (521)
T ss_dssp CCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC
T ss_pred CCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHH
Confidence 99999 9999999999999998789999999999999999999999999986532 223543347999999999998776
Q ss_pred hHHHhhccCCCCCCCCeEEEcCCCCC---------ceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccce
Q 009149 176 DLRAHLDKGKKLPLPDGILINGRGSG---------AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQ 246 (542)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~liNG~~~~---------~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p 246 (542)
++.. ..+...+.++.+||||+... +.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|
T Consensus 179 ~~~~--~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p 256 (521)
T 1v10_A 179 VLFP--NPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQP 256 (521)
T ss_dssp ---------CCCSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEE
T ss_pred HHhh--ccCCCCCCCCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccccc
Confidence 6532 12233456899999999752 789999999999999999999999999999999999999999999
Q ss_pred eeeeeEEEcCCceEEEEEEeCCCCcceEEEEeeeecCC---ccceEEEEEecCCCCCCCCCCCCCCcccccccccccccc
Q 009149 247 TTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTST---VLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSI 323 (542)
Q Consensus 247 ~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l 323 (542)
+.++++.|+|||||||+|++++.+|+|+|++....... .....++|+|++.....+...+. +..+. ..
T Consensus 257 ~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~~~~-------~~- 327 (521)
T 1v10_A 257 LTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SGTAL-------NE- 327 (521)
T ss_dssp EEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CSCBC-------CG-
T ss_pred eeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-ccccc-------ch-
Confidence 99999999999999999999977899999998653211 12346999998765321110000 00000 00
Q ss_pred ccCCCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCC
Q 009149 324 RSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTG 403 (542)
Q Consensus 324 ~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~ 403 (542)
..+.+....+.|.... ....++++.+.... .+....|+|||++|..+..|+|++.+. +.+..
T Consensus 328 -~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~~--~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~~~--------- 389 (521)
T 1v10_A 328 -ANLIPLINPGAPGNPV---PGGADINLNLRIGR--NATTADFTINGAPFIPPTVPVLLQILS---GVTNP--------- 389 (521)
T ss_dssp -GGCCBSSCCCCSSCSS---TTCSSEEEECCEEC--CSSSSCCEESSCCCCCCSSCHHHHHHH---TCCCG---------
T ss_pred -hhcccCCcccCCCccc---CCcceEEEEEEEec--CCceeEEEECCCcccCCCCchhhhhhc---CCccc---------
Confidence 1222221111121110 01234555554321 112237999999999888888766432 11110
Q ss_pred CCccccceEEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEe-CCCCEEEEE
Q 009149 404 GGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQV-YPKSWSAIY 482 (542)
Q Consensus 404 ~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~v-pp~g~~~ir 482 (542)
.+...++.++.++.|++|||+|+| .+.||||||||+||||+++++. .+++.+|.|||||.| ++++|++||
T Consensus 390 ~~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~gg~v~Ir 460 (521)
T 1v10_A 390 NDLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFR 460 (521)
T ss_dssp GGSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEE
T ss_pred ccCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCCCcEEEEE
Confidence 012345678899999999999999 7899999999999999998653 267889999999999 899999999
Q ss_pred EEecCceeeEEEeechhhhhcceEEEEEEecCCccccccCCCC-CcchhccccCCCCC
Q 009149 483 IALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIP-KNARLCGKAAGRHT 539 (542)
Q Consensus 483 f~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~c~~~~~~~~ 539 (542)
|+|||||.|+|||||++|++.|||..|.|...+. . +..++| .+.+.|..+.+..+
T Consensus 461 f~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~-~-~~~~~p~~~~~~C~~~~~~~~ 516 (521)
T 1v10_A 461 FVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNI-P-IANAISPAWDDLCPKYNANNP 516 (521)
T ss_dssp EECCSCEEEEEEESCHHHHTTTCEEEEEESGGGH-H-HHSCCCHHHHTHHHHHTTCC-
T ss_pred EEeCCCeeEEEeeChHHHHhCCCeEEEEECCcch-h-hccCCChHHhhhchhhhccCC
Confidence 9999999999999999999999999998865432 2 344455 45789999887644
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=3e-95 Score=775.77 Aligned_cols=466 Identities=22% Similarity=0.354 Sum_probs=363.6
Q ss_pred EEEEEEEEEEEecCCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCC-----CceEEeccccCCCCCCCCCCccc-
Q 009149 29 RFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDE-----PFLLSWNGIQNRRNSFEDGVYGT- 102 (542)
Q Consensus 29 ~~~~l~i~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~- 102 (542)
..|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||+++.+++++||++++
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999975 79999999999988999999999
Q ss_pred CCCCCCCCeEEEEEEECCCceeeeEecchhhhhhcceeeEEEEeCCCCCC-CCCCCCCCCeEEEEEeeeccchhhHHHhh
Q 009149 103 TCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIP-VPFPDPAGDYTVLIGDWYKSNHTDLRAHL 181 (542)
Q Consensus 103 q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~-~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 181 (542)
||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+.. .+|+..++|++|+++||+++...++
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 99999999999999987889999999999999999999999999865421 2353345678999999999876442
Q ss_pred ccCCCCCCCCeEEEcCCCC---------CceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccceeeeeeE
Q 009149 182 DKGKKLPLPDGILINGRGS---------GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSL 252 (542)
Q Consensus 182 ~~~~~~~~~~~~liNG~~~---------~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~l 252 (542)
.......++++||||++. .+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+++|
T Consensus 161 -~~~~p~~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l 239 (495)
T 3t6v_A 161 -GAGGAITADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEI 239 (495)
T ss_dssp -CSSSCCCCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBE
T ss_pred -ccCCCCCCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeE
Confidence 122234789999999852 3689999999999999999999999999999999999999999999999999
Q ss_pred EEcCCceEEEEEEeCCCCcceEEEEeeeecCC---ccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCC
Q 009149 253 DVHVGQSYSVLVTADQPARDYYIVVSSRFTST---VLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTA 329 (542)
Q Consensus 253 ~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~ 329 (542)
.|+|||||||+|++++++|+|||++....... .....|+|+|.++....+ ....+... ...... ..|.+
T Consensus 240 ~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p--~~~~~~~~----~~~~~~--~~L~p 311 (495)
T 3t6v_A 240 QIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADP--VTVASTVH----TKCLIE--TDLHP 311 (495)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCC--CCCCCSSC----SSBCCG--GGCCB
T ss_pred EEcCceEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCC--CCCCCCCC----cccccc--ccccc
Confidence 99999999999999987899999998653322 223579999987643211 10001000 000000 12222
Q ss_pred CCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCcccc
Q 009149 330 SGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQD 409 (542)
Q Consensus 330 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 409 (542)
..+...|... .....++++.+.... ++ ..|+|||++|..++.|+|++.+. +.+... .....
T Consensus 312 ~~~~~~p~~~---~~~~~d~~~~l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~---------~~~~~ 372 (495)
T 3t6v_A 312 LSRNGVPGNP---HQGGADCNLNLSLGF---AC-GNFVINGVSFTPPTVPVLLQICS---GANTAA---------DLLPS 372 (495)
T ss_dssp SSCCCCSSCS---STTCSSEEEECCEEE---ET-TEEEETTBCCCCCSSCHHHHHHT---TCCSST---------TSSST
T ss_pred cccccCCCcc---CCCCCcEEEEEEEEe---cC-cEEEEcCEecCCCCCcchhhhhc---CCcCcc---------cccCC
Confidence 2111111110 011245566554422 12 27999999999989998876542 221110 12234
Q ss_pred ceEEeccCCcEEEEEEE-cCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCC-CCEEEEEEEecC
Q 009149 410 TAVMGADYRAFIEIVFQ-NDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYP-KSWSAIYIALDN 487 (542)
Q Consensus 410 ~~~~~~~~g~~v~~~i~-N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp-~g~~~irf~adn 487 (542)
..++.++.|++|||+|+ |...+.||||||||+|+||++++. ..+|+.+|.||||+.|++ ++|++|||++||
T Consensus 373 ~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g~-------~~~n~~~P~~rDtv~v~~~g~~~~irf~adn 445 (495)
T 3t6v_A 373 GSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESASN-------STSNYDDPIWRDVVSIGGVGDNVTIRFCTDN 445 (495)
T ss_dssp TSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCSTTCEEEEEEECCS
T ss_pred cceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCCC-------CCcccCCCCCccEEEcCCCCcEEEEEEEcCC
Confidence 56889999999999998 677889999999999999987532 247889999999999997 899999999999
Q ss_pred ceeeEEEeechhhhhcceEEEEEEecCCccccccCCCCCc-chhccccC
Q 009149 488 VGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKN-ARLCGKAA 535 (542)
Q Consensus 488 pG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~ 535 (542)
||.|+|||||++|++.||++.|.+ .+++.. +..++|+. ...|..+.
T Consensus 446 PG~W~~HCHi~~H~~~Gm~~~~~e-~~~~~~-~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 446 PGPWFLHCHIDWHLDAGFAIVFAE-DIPNTA-SANPVPEAWSNLCPSYD 492 (495)
T ss_dssp CEEEEEEESCHHHHHTTCEEEEEE-THHHHH-HHCCCCHHHHHHHHHHH
T ss_pred CeeEEEEecchhHhhcCCeEEEEE-ChhHhc-cccCCCHHHHHHhhHhh
Confidence 999999999999999999999854 444422 23445555 57897654
No 6
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=1.2e-94 Score=770.98 Aligned_cols=467 Identities=23% Similarity=0.380 Sum_probs=364.9
Q ss_pred EEEEEEEEEEEecCCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCC-----CceEEeccccCCCCCCCCCCccc-
Q 009149 29 RFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDE-----PFLLSWNGIQNRRNSFEDGVYGT- 102 (542)
Q Consensus 29 ~~~~l~i~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~- 102 (542)
..|+|+|++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|.+++++||++++
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999974 79999999999988999999999
Q ss_pred CCCCCCCCeEEEEEEECCCceeeeEecchhhhhhcceeeEEEEeCCCCC-CCCCCCCCCCeEEEEEeeeccchhhHHHhh
Q 009149 103 TCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRI-PVPFPDPAGDYTVLIGDWYKSNHTDLRAHL 181 (542)
Q Consensus 103 q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 181 (542)
||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 9999999999999998788999999999999999999999999986542 1235333567899999999976532
Q ss_pred ccCCCCCCCCeEEEcCCCC--------CceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccceeeeeeEE
Q 009149 182 DKGKKLPLPDGILINGRGS--------GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLD 253 (542)
Q Consensus 182 ~~~~~~~~~~~~liNG~~~--------~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~l~ 253 (542)
.+.....++++||||++. .+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+++|.
T Consensus 159 -~~~~p~~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~ 237 (499)
T 3pxl_A 159 -GPRFPGGADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQ 237 (499)
T ss_dssp -SCSSCSSCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEE
T ss_pred -ccCCCCCCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEE
Confidence 122234789999999962 36899999999999999999999999999999999999999999999999999
Q ss_pred EcCCceEEEEEEeCCCCcceEEEEeeeecCC---ccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCCC
Q 009149 254 VHVGQSYSVLVTADQPARDYYIVVSSRFTST---VLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTAS 330 (542)
Q Consensus 254 l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~ 330 (542)
|+|||||||+|++++.+|+|||++....... .....|+|+|.++....+. .+..+ . ...+.. ..|.+.
T Consensus 238 i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~-~~~~~--~----~~~~~~--~~L~p~ 308 (499)
T 3pxl_A 238 IFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPT-TNQTT--S----VKPLNE--VDLHPL 308 (499)
T ss_dssp ECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCC-CCCCC--C----SSBCCG--GGCCBS
T ss_pred ECCCcEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCC-CCCCC--C----Cccccc--cccccc
Confidence 9999999999999987799999998653322 1235799999876432111 00000 0 000000 122222
Q ss_pred CCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccc
Q 009149 331 GPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDT 410 (542)
Q Consensus 331 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 410 (542)
...+.|... .....++++.+.... ++ ..|+|||++|..++.|+|++.+. +.+... ......
T Consensus 309 ~~~~~p~~~---~~~~~d~~~~l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~---------~~~~~~ 369 (499)
T 3pxl_A 309 VSTPVPGAP---SSGGVDKAINMAFNF---NG-SNFFINGASFVPPTVPVLLQILS---GAQTAQ---------DLLPSG 369 (499)
T ss_dssp SCCCCSSCS---STTCSSEEEECCEEE---CS-SCEEETTBCCCCCSSCHHHHHHT---TCCSTT---------TSSSTT
T ss_pred ccccCCCcc---cCCCCcEEEEEEEEe---cC-cEEEEcCEecCCCCCchhhhhhc---CCcccc---------ccCCCc
Confidence 111111110 011245666655432 22 26999999999999998876542 211110 122345
Q ss_pred eEEeccCCcEEEEEEE---cCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCC---CCEEEEEEE
Q 009149 411 AVMGADYRAFIEIVFQ---NDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYP---KSWSAIYIA 484 (542)
Q Consensus 411 ~~~~~~~g~~v~~~i~---N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp---~g~~~irf~ 484 (542)
.++.++.|++|||+|+ |...+.||||||||+|+||++++. ..+|+.+|.||||+.|++ ++|++|||+
T Consensus 370 ~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g~-------~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ 442 (499)
T 3pxl_A 370 SVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGS-------TVYNYDNPIFRDVVSTGTPAAGDNVTIRFD 442 (499)
T ss_dssp SEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCCGGGTCEEEEEEE
T ss_pred eeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccCC-------cccccCCCCccceEEcCCcCCCcEEEEEEE
Confidence 6889999999999999 566789999999999999987531 247889999999999997 999999999
Q ss_pred ecCceeeEEEeechhhhhcceEEEEEEecCCccccccCCCCCc-chhccccCCCC
Q 009149 485 LDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKN-ARLCGKAAGRH 538 (542)
Q Consensus 485 adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~~~~ 538 (542)
+||||.|+|||||++|++.||++.|. +.+++.. +..++|+. ...|..+..-+
T Consensus 443 adnPG~W~~HCHi~~H~~~Gm~~~~~-e~~~~~~-~~~~~p~~~~~~C~~~~~~~ 495 (499)
T 3pxl_A 443 TNNPGPWFLHCHIDFHLEGGFAVVMA-EDTPDVK-AVNPVPQAWSDLCPTYDALD 495 (499)
T ss_dssp CCSCEEEEEEESSHHHHHTTCEEEEE-ESGGGHH-HHSCCCHHHHTHHHHHHTSC
T ss_pred cCCCceEEEEeCChhHhhCCCcEEEE-EChhHhc-cccCCCHHHHHhhhHhhccC
Confidence 99999999999999999999999884 4555432 33445555 57998776543
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=3.3e-93 Score=765.52 Aligned_cols=462 Identities=26% Similarity=0.427 Sum_probs=364.6
Q ss_pred EEEEEEEEEEecCCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCC-----CCceEEeccccCCCCCCCCCCccc-C
Q 009149 30 FFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLD-----EPFLLSWNGIQNRRNSFEDGVYGT-T 103 (542)
Q Consensus 30 ~~~l~i~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~~-q 103 (542)
.|+|++++..+.+||+++.+|+|||++ ||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ |
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 699999999999999999999999999 999999999999999999998 999999999999888999999999 9
Q ss_pred CCCCCCCeEEEEEEECCCceeeeEecchhhhhhcceeeEEEEeCCCCC-CCCCCCCCCCeEEEEEeeeccchhhHHHhhc
Q 009149 104 CPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRI-PVPFPDPAGDYTVLIGDWYKSNHTDLRAHLD 182 (542)
Q Consensus 104 ~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~ 182 (542)
|+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+|+||+++...++..
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~--- 161 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG--- 161 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcC---
Confidence 999999999999998789999999999999999999999999986532 2345433479999999999987765421
Q ss_pred cCCCCCCCCeEEEcCCCC--------CceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccceeeeeeEEE
Q 009149 183 KGKKLPLPDGILINGRGS--------GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDV 254 (542)
Q Consensus 183 ~~~~~~~~~~~liNG~~~--------~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l 254 (542)
.+.++.+||||+.. .+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|
T Consensus 162 ----~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l 237 (503)
T 1hfu_A 162 ----AAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQI 237 (503)
T ss_dssp ------CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEE
T ss_pred ----CCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEE
Confidence 14689999999985 278999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEEEEeCCCCcceEEEEeeeecCC-------ccceEEEEEecCCCCCCCCCCCCCCc-cccccccccccccccC
Q 009149 255 HVGQSYSVLVTADQPARDYYIVVSSRFTST-------VLTTTGILHYSNSAGPVSGPIPGGPT-VQIDWSLNQARSIRSN 326 (542)
Q Consensus 255 ~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-------~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~l~~~ 326 (542)
+|||||||+|++++.+|+|+|++....... .....++|+|.+.....+. .+..|. .++ .. ..
T Consensus 238 ~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~-~~~~~~~~~l----~~-----~~ 307 (503)
T 1hfu_A 238 FTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPT-TSANPNPAQL----NE-----AD 307 (503)
T ss_dssp CTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCC-CCCCSSCCBC----CG-----GG
T ss_pred cccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCC-CCCCCccCCC----cc-----cc
Confidence 999999999999977899999998653211 1234699999876532110 000110 010 00 11
Q ss_pred CCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCc
Q 009149 327 LTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGI 406 (542)
Q Consensus 327 l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~ 406 (542)
|.+....+.|.... ....++++.+.... ++. .|+|||++|..+..|+|++.+. +.+.. .+.
T Consensus 308 l~p~~~~~~p~~~~---~~~~~~~~~l~~~~---~~~-~~~iNg~~~~~~~~P~l~~~~~---g~~~~---------~~~ 368 (503)
T 1hfu_A 308 LHALIDPAAPGIPT---PGAADVNLRFQLGF---SGG-RFTINGTAYESPSVPTLLQIMS---GAQSA---------NDL 368 (503)
T ss_dssp CBBSSSCSCSSCSS---TTCSSEEEECCEEE---ETT-EEEETTBCCCCCSSCHHHHHHT---TCCSG---------GGS
T ss_pred ccccCccCCCCccc---CCcceEEEEEEeec---cCc-eEEECCCccCCCCCcchhhhhc---CCccc---------ccC
Confidence 22211111121100 01234445444311 222 7999999999888888776542 11111 012
Q ss_pred cccceEEeccCCcEEEEEEEc-CCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEe-CCCCEEEEEEE
Q 009149 407 YQDTAVMGADYRAFIEIVFQN-DEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQV-YPKSWSAIYIA 484 (542)
Q Consensus 407 ~~~~~~~~~~~g~~v~~~i~N-~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~v-pp~g~~~irf~ 484 (542)
..++.++.++.|++|||+|+| .+.+.||||||||+||||+++++. .+++.+|.|||||.| ++++|++|||+
T Consensus 369 ~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~v~irf~ 441 (503)
T 1hfu_A 369 LPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFV 441 (503)
T ss_dssp SSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEE
T ss_pred CCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCceEEEEEE
Confidence 345778999999999999994 557899999999999999998653 267789999999999 89999999999
Q ss_pred ecCceeeEEEeechhhhhcceEEEEEEecCCccccccCCCC-CcchhccccCCC
Q 009149 485 LDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIP-KNARLCGKAAGR 537 (542)
Q Consensus 485 adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~c~~~~~~ 537 (542)
|||||.|+|||||++|++.|||+.|.|...+. .+..++| .+.+.|+.+...
T Consensus 442 adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C~~~~~~ 493 (503)
T 1hfu_A 442 TDNPGPWFFHCHIEFHLMNGLAIVFAEDMANT--VDANNPPVEWAQLCEIYDDL 493 (503)
T ss_dssp CCSCEEEEEEESSHHHHHTTCEEEEEECHHHH--HHHCCCCHHHHHHHHHHHTC
T ss_pred cCCCeeeeEecCchhHhhCCCeEEEEECchhh--hhccCCChHHhhhccchhhc
Confidence 99999999999999999999999999864432 2344556 457899887664
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=2e-92 Score=767.42 Aligned_cols=476 Identities=23% Similarity=0.349 Sum_probs=369.0
Q ss_pred CCCeEEEEEEEEEEE--ecCCCee-eEEEEEcCCCccceEEEecCCEEEEEEEeCC-CCCceEEeccccCCCCCCCCCCc
Q 009149 25 EDPYRFFNWNVTYGD--IYPLGVR-QRGILINWQFPGPDIHSVTNDNLIINVFNSL-DEPFLLSWNGIQNRRNSFEDGVY 100 (542)
Q Consensus 25 ~~~~~~~~l~i~~~~--~~~~G~~-~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~ 100 (542)
.+.+++|+|++++.. +.+||+. +.+|+|||++|||+||+++||+|+|+|+|+| +++++|||||+++.+++++||+|
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~ 109 (559)
T 2q9o_A 30 TGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGAN 109 (559)
T ss_dssp CCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCB
T ss_pred CCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCC
Confidence 556899999999999 8899999 9999999999999999999999999999999 68999999999998889999999
Q ss_pred cc-CCCCCC-CCeEEEEEEECCCceeeeEecchhhhhhcceeeEEEEeCCCCCCCCCCCCCCCe-EEEEEeeeccchhhH
Q 009149 101 GT-TCPIPP-GKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDY-TVLIGDWYKSNHTDL 177 (542)
Q Consensus 101 ~~-q~~i~p-G~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~ 177 (542)
++ ||+|+| |++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.. .+| +.|. +|+|+||+++...++
T Consensus 110 ~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~~~---d~d~~~l~l~Dw~~~~~~~~ 183 (559)
T 2q9o_A 110 GVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS--LPY---DIDLGVFPITDYYYRAADDL 183 (559)
T ss_dssp TTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHHH
T ss_pred ccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCc--CCC---cccceEEEEeccccCCHHHH
Confidence 99 999999 9999999996 6899999999999999999999999998653 345 7777 999999999987766
Q ss_pred HHhhccCCCCCCCCeEEEcCCCC--------CceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccceeee
Q 009149 178 RAHLDKGKKLPLPDGILINGRGS--------GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTY 249 (542)
Q Consensus 178 ~~~~~~~~~~~~~~~~liNG~~~--------~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~ 249 (542)
..... ....+.++.+||||+.. .+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+
T Consensus 184 ~~~~~-~~~~~~~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 262 (559)
T 2q9o_A 184 VHFTQ-NNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTV 262 (559)
T ss_dssp HHHHT-TSCCCCBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEE
T ss_pred hhhhh-cCCCCccceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCceEe
Confidence 43222 22345689999999984 3689999999999999999999999999999999999999999999999
Q ss_pred eeEEEcCCceEEEEEEeCCCCcceEEEEee--ee---cCCccceEEEEEecCCCCCCCCCCCCCCc-ccccccccccccc
Q 009149 250 SSLDVHVGQSYSVLVTADQPARDYYIVVSS--RF---TSTVLTTTGILHYSNSAGPVSGPIPGGPT-VQIDWSLNQARSI 323 (542)
Q Consensus 250 ~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~--~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~l 323 (542)
++|.|+|||||||+|++++.+|+|||++.. .. ........++|+|.++... .|..+. ...+ ..+.+.
T Consensus 263 ~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~----~P~~~~~~~~~---~~~~~~ 335 (559)
T 2q9o_A 263 DSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGG----LPTDEGTPPVD---HQCLDT 335 (559)
T ss_dssp SCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCS----CCCCCCCCCCC---CTTCCC
T ss_pred CeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCC----CCCCCCCcCCC---cccccc
Confidence 999999999999999999778999999986 21 1123456899999876431 111110 0000 000000
Q ss_pred ccCCCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecC-CCCchhhhcccccCcceecCCCCCCCC
Q 009149 324 RSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIP-ADTPLKLADYFKIGGVFRIGSISDNPT 402 (542)
Q Consensus 324 ~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~-~~~p~l~~~~~~~~~~~~~~~~~~~p~ 402 (542)
..+.+..+.+.|...+ ....++++.+.... ...+...|+|||++|.. +..|+|.+.+....
T Consensus 336 -~~l~p~~~~~~p~~~~---~~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~------------- 397 (559)
T 2q9o_A 336 -LDVRPVVPRSVPVNSF---VKRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGNT------------- 397 (559)
T ss_dssp -SCCCBSSCCBCCCTTC---CCCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTCC-------------
T ss_pred -cccccCCCCCCCCccc---ccceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCCc-------------
Confidence 1222221111121111 11123445443321 11345689999999975 46787655332110
Q ss_pred CCCccccceEEeccC-CcEEEEEEEcCC----CCCCCeeecCcceEEEeecC---------CCCCCcC-CCCCCCCCCCc
Q 009149 403 GGGIYQDTAVMGADY-RAFIEIVFQNDE----DIIQSYHLNGYQFWVVGMDG---------GQWTSAS-RNQYNLRDAVA 467 (542)
Q Consensus 403 ~~~~~~~~~~~~~~~-g~~v~~~i~N~~----~~~HP~HlHG~~F~Vl~~~~---------g~~~~~~-~~~~~~~~p~~ 467 (542)
....+..++.++. +++++|+|+|.+ .+.||||||||+||||+++. |.|++.. ...+++.+|.|
T Consensus 398 --~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~ 475 (559)
T 2q9o_A 398 --SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPR 475 (559)
T ss_dssp --CCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCE
T ss_pred --cCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCc
Confidence 0113456677764 688889999976 78999999999999999987 6776431 23578899999
Q ss_pred ceEEEeCCCCEEEEEEEecCceeeEEEeechhhhhcceEEEEEEecCCccccccCCC--CC-cchhccccCC
Q 009149 468 RVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPI--PK-NARLCGKAAG 536 (542)
Q Consensus 468 rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~--p~-~~~~c~~~~~ 536 (542)
||||.|++++|++|||+|||||.|||||||++|++.|||+.|.|... +. .+..++ |+ ..+.|+.+..
T Consensus 476 RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~-~~-~~~~~~~~p~~~~~~C~~~~~ 545 (559)
T 2q9o_A 476 RDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA-DL-RQRISQEDEDDFNRVCDEWRA 545 (559)
T ss_dssp ESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH-HH-GGGCCHHHHHHHHHHHHHHHH
T ss_pred cceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc-hh-hhccccCCchhhhhhcccccc
Confidence 99999999999999999999999999999999999999999988543 22 234433 54 5689987653
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=4.3e-87 Score=707.24 Aligned_cols=404 Identities=20% Similarity=0.259 Sum_probs=327.2
Q ss_pred ecCCCeEEEEEEEEEEEecCCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCccc
Q 009149 23 SAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGT 102 (542)
Q Consensus 23 ~~~~~~~~~~l~i~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (542)
.+.+++++|+|++++..+.++|+++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 11 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~-- 86 (439)
T 2xu9_A 11 RSQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF-- 86 (439)
T ss_dssp ECBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT--
T ss_pred ccCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc--
Confidence 356788999999999999999999999999999999999999999999999999999999999999876 4899997
Q ss_pred CCCCCCCCeEEEEEEEC-CCceeeeEecch----hhhhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchhhH
Q 009149 103 TCPIPPGKNFTYILQVK-DQIGSFYYFPSL----AFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDL 177 (542)
Q Consensus 103 q~~i~pG~~~~Y~f~~~-~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~ 177 (542)
+.|+||++|+|+|+++ +++||||||||. +.|+.+||+|+|||+++.+..... ..++|++|+|+||+++... +
T Consensus 87 -~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~-~~~~e~~l~l~D~~~~~~~-~ 163 (439)
T 2xu9_A 87 -LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPEL-REAEEHLLVLKDLALQGGR-P 163 (439)
T ss_dssp -CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHH-HTSEEEEEEEEEECEETTE-E
T ss_pred -ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccC-CCCCcEEEEEEeeeeCCCC-c
Confidence 6799999999999975 479999999997 479999999999999864321111 2378999999999987531 1
Q ss_pred HHhhc-cCCCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCccc-ceeeeeeEEEc
Q 009149 178 RAHLD-KGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHT-LQTTYSSLDVH 255 (542)
Q Consensus 178 ~~~~~-~~~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~p~~~~~l~l~ 255 (542)
..... .......++.++|||+.. |.++|++| +|||||||+|+++.+.|+|+||+|+||+.||.++ +|+.++++.|+
T Consensus 164 ~~~~~~~~~~g~~~~~~~iNG~~~-p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~ 241 (439)
T 2xu9_A 164 APHTPMDWMNGKEGDLVLVNGALR-PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLA 241 (439)
T ss_dssp CCCCHHHHHHCCCCSEEEETTEES-CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEEC
T ss_pred CCCCccccccCCCCCEEEECCccC-CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEEC
Confidence 00000 000123578999999997 99999999 9999999999999999999999999999999997 89999999999
Q ss_pred CCceEEEEEEeCCCCcceEEEEeeeecC------------------CccceEEEEEecCCCCCCCCCCCCCCcccccccc
Q 009149 256 VGQSYSVLVTADQPARDYYIVVSSRFTS------------------TVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSL 317 (542)
Q Consensus 256 pgeR~dv~v~~~~~~g~y~i~~~~~~~~------------------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~ 317 (542)
|||||||+|++++ +|+|+|++...... ......++++|.+...+ .++|.
T Consensus 242 pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~p~---------- 308 (439)
T 2xu9_A 242 PGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP--LPLPK---------- 308 (439)
T ss_dssp TTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC--CCCCS----------
T ss_pred CceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc--ccCcc----------
Confidence 9999999999995 89999999743211 11245678888765321 11111
Q ss_pred ccccccccCCCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCC
Q 009149 318 NQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSI 397 (542)
Q Consensus 318 ~~~~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~ 397 (542)
.+.+....+.+ ..+|++.|...+ .+ ..|+|||++|..+..+
T Consensus 309 --------~l~~~~~l~~~---------~~~r~~~l~~~~---~g-~~~~iNg~~~~~~~~~------------------ 349 (439)
T 2xu9_A 309 --------ALSPFPTLPAP---------VVTRRLVLTEDM---MA-ARFFINGQVFDHRRVD------------------ 349 (439)
T ss_dssp --------CCCCCCCCCCC---------SEEEEEEEEEEG---GG-TEEEETTBCCCTTCCC------------------
T ss_pred --------cCCCcccCCCC---------CcceEEEEEeec---cC-ceEeECCEECCCCCCc------------------
Confidence 01000000101 124677766532 11 3699999998643222
Q ss_pred CCCCCCCCccccceEEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCC
Q 009149 398 SDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKS 477 (542)
Q Consensus 398 ~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g 477 (542)
+.++.|++++|+|+|.+.+.||||||||+||||+++++.+ .+|.|||||.|+|++
T Consensus 350 ---------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~----------~~p~~rDTv~v~p~~ 404 (439)
T 2xu9_A 350 ---------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF----------PYRAWKDVVNLKAGE 404 (439)
T ss_dssp ---------------EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC----------SSCCCBSEEEECTTC
T ss_pred ---------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC----------CCCCCeEEEEeCCCC
Confidence 4678999999999999999999999999999999976532 368999999999999
Q ss_pred EEEEEEEecCceeeEEEeechhhhhcceEEEEEEe
Q 009149 478 WSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVY 512 (542)
Q Consensus 478 ~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 512 (542)
+++|||++||||.|||||||++|++.|||..|+|+
T Consensus 405 ~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 405 VARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp EEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 99999999999999999999999999999999984
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=3.6e-86 Score=701.06 Aligned_cols=403 Identities=17% Similarity=0.176 Sum_probs=323.2
Q ss_pred CeEEEEEEEEEEEecC-CCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCC
Q 009149 27 PYRFFNWNVTYGDIYP-LGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCP 105 (542)
Q Consensus 27 ~~~~~~l~i~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~ 105 (542)
.+++|+|++++..+++ +|.++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++... +||+| ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCc
Confidence 4688999999999987 799999999999999999999999999999999999999999999988764 99999 899
Q ss_pred CCCCCeEEEEEEECCCceeeeEecch----hhhhhcceeeEEEEeCCCCCCCCCCC--CCCCeEEEEEeeeccchhhHHH
Q 009149 106 IPPGKNFTYILQVKDQIGSFYYFPSL----AFHKAAGGFGGIRILSRPRIPVPFPD--PAGDYTVLIGDWYKSNHTDLRA 179 (542)
Q Consensus 106 i~pG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~ 179 (542)
|+||++|+|+|++.+++||||||||. +.|+++||+|+|||+++.+...+++. .++|++|+|+||+++.+.++..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 99999999999975559999999998 68999999999999986543222222 4789999999999987654421
Q ss_pred hhccCCCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEE-ecceeEEEeecCccc-ceeeeeeEEEcCC
Q 009149 180 HLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRI-QNHKMKLVEVEGTHT-LQTTYSSLDVHVG 257 (542)
Q Consensus 180 ~~~~~~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i-~gh~~~via~DG~~~-~p~~~~~l~l~pg 257 (542)
.........++.+||||+.. |.++|++| +|||||||+|+.+.+.|+| +||+|+||++||.++ +|..++++.|+||
T Consensus 173 -~~~~~~~~~~d~~liNG~~~-p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pg 249 (451)
T 2uxt_A 173 -NEPGSGGFVGDTLLVNGVQS-PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPG 249 (451)
T ss_dssp -CCCSSSCCCCSEEEETTEES-CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTT
T ss_pred -ccccCCCCcCCEEEECCccc-ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECce
Confidence 11223446789999999998 99999999 9999999999999999999 899999999999997 7999999999999
Q ss_pred ceEEEEEEeCCCCcceEEEEeeeecC-----------CccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccC
Q 009149 258 QSYSVLVTADQPARDYYIVVSSRFTS-----------TVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSN 326 (542)
Q Consensus 258 eR~dv~v~~~~~~g~y~i~~~~~~~~-----------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~ 326 (542)
|||||+|+++ +++.|+|++...... ......++++|........ .....| ..
T Consensus 250 eR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p---------------~~ 312 (451)
T 2uxt_A 250 ERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLP---------------MR 312 (451)
T ss_dssp CEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCC---------------SC
T ss_pred eEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC-ccccCc---------------cc
Confidence 9999999998 478999998754211 1123357788865432110 000001 11
Q ss_pred CCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCc
Q 009149 327 LTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGI 406 (542)
Q Consensus 327 l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~ 406 (542)
|.+....+ . ....++++.|+. .|+|||++|..+..
T Consensus 313 L~~~~~~~--~------~~~~~~~~~l~~---------~~~iNg~~f~~~~~---------------------------- 347 (451)
T 2uxt_A 313 LLPTEIMA--G------SPIRSRDISLGD---------DPGINGQLWDVNRI---------------------------- 347 (451)
T ss_dssp SSSSCCCC--C------CCSEEEEEEECS---------SSSBTTBCCCTTCC----------------------------
T ss_pred cCCCCCCC--C------CCcceEEEEEee---------EEEECCEeCCCCCC----------------------------
Confidence 21111111 0 122456666641 48999999864321
Q ss_pred cccceEEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEec
Q 009149 407 YQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALD 486 (542)
Q Consensus 407 ~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~ad 486 (542)
.+.++.|++|+|+|+|. +.||||||||+||||++++.. +++.+|.|||||.| +++++|+|+||
T Consensus 348 -----~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~~--------~~~~~p~~rDTv~v--g~~~~i~~~~d 410 (451)
T 2uxt_A 348 -----DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGAM--------PFPEDRGWKDTVWV--DGQVELLVYFG 410 (451)
T ss_dssp -----CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTBC--------CCGGGSSCBSEEEE--EEEEEEEEECC
T ss_pred -----cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCcC--------CCcccCCCccEEEE--CCEEEEEEEeC
Confidence 14678999999999998 789999999999999997432 45668999999999 89999999999
Q ss_pred Ccee----eEEEeechhhhhcceEEEEEEecCC
Q 009149 487 NVGM----WNLRSESWARQYLGQQFYLRVYTAS 515 (542)
Q Consensus 487 npG~----w~~HCHil~H~d~GMm~~~~V~~~~ 515 (542)
|||. |||||||++|+|.|||..|.|...+
T Consensus 411 npg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 411 QPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp SCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred CCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 9988 9999999999999999999997643
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=6.5e-84 Score=695.19 Aligned_cols=417 Identities=14% Similarity=0.150 Sum_probs=326.6
Q ss_pred eEEEEEEEEEEE--ecCCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCC
Q 009149 28 YRFFNWNVTYGD--IYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCP 105 (542)
Q Consensus 28 ~~~~~l~i~~~~--~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~ 105 (542)
+++|+|++++.. +.++|..+.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++.. .+||++ ||+
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--~~~ 111 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--EDI 111 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS--SSC
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC--CCC
Confidence 578999999755 56789889999999999999999999999999999999999999999998764 699988 899
Q ss_pred CCCCCeEEEEEEECCCceeeeEecchh----hhhhcceeeEEEEeCCCCCCCCCCC--CCCCeEEEEEeeeccchhhHHH
Q 009149 106 IPPGKNFTYILQVKDQIGSFYYFPSLA----FHKAAGGFGGIRILSRPRIPVPFPD--PAGDYTVLIGDWYKSNHTDLRA 179 (542)
Q Consensus 106 i~pG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~ 179 (542)
|+||++|+|+|++.+++||||||||.+ .|+++||+|+|||+++.+...+++. .++|++|+|+||+++.++++..
T Consensus 112 i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~ 191 (534)
T 3abg_A 112 TEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVT 191 (534)
T ss_dssp BSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCC
T ss_pred CCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceec
Confidence 999999999999755689999999985 6899999999999997665444432 2568899999999986654421
Q ss_pred hhccCCCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEec-------ceeEEEeecCcc-cceeeeee
Q 009149 180 HLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQN-------HKMKLVEVEGTH-TLQTTYSS 251 (542)
Q Consensus 180 ~~~~~~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~g-------h~~~via~DG~~-~~p~~~~~ 251 (542)
. ........+|.+||||+.. +.++|++ ++|||||||+|+++.+.|+|++ |+|+|||+||.+ .+|+.+++
T Consensus 192 ~-~~~~~~~~gd~~lvNG~~~-p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~ 268 (534)
T 3abg_A 192 T-NGELNSFWGDVIHVNGQPW-PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSL 268 (534)
T ss_dssp C-TTCSSCCCCSEEEETTEES-CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESC
T ss_pred c-CCCCccccCceeccCCccC-ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEece
Confidence 1 0112234679999999997 8999998 5999999999999999999987 999999999985 58999999
Q ss_pred EEEcCCceEEEEEEeCCCCc-ceEEEEeeee-c-----CCccceEEEEEecCCCCCCCCCCCCCCccccccccccccccc
Q 009149 252 LDVHVGQSYSVLVTADQPAR-DYYIVVSSRF-T-----STVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIR 324 (542)
Q Consensus 252 l~l~pgeR~dv~v~~~~~~g-~y~i~~~~~~-~-----~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~ 324 (542)
|.|+|||||||+|++++.+| .|+|++.... . .......++++|.....+........|
T Consensus 269 l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P--------------- 333 (534)
T 3abg_A 269 LYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP--------------- 333 (534)
T ss_dssp EEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC---------------
T ss_pred EEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc---------------
Confidence 99999999999999997667 6999874311 0 111234578998755421000000001
Q ss_pred cCCCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCC
Q 009149 325 SNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGG 404 (542)
Q Consensus 325 ~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~ 404 (542)
..|.+.. .+.+ ....++++.|... ...|+|||++|..+..|++
T Consensus 334 ~~L~~~~-~p~~-------~~~~~~~~~~~~~------~~~w~iNG~~f~~~~~p~l----------------------- 376 (534)
T 3abg_A 334 ANLRDVP-FPSP-------TTNTPRQFRFGRT------GPTWTINGVAFADVQNRLL----------------------- 376 (534)
T ss_dssp CCCCCCS-CCCC-------CCCCCEEEECSCC------CSTTCCCCBTTBCTTSCCC-----------------------
T ss_pred cccccCC-CCCC-------ccccceEEEEecc------CceeEECCcccCCCCCcce-----------------------
Confidence 0111100 0111 1124677777532 1359999999976544432
Q ss_pred CccccceEEeccCCcEEEEEEEcCC-CCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEE
Q 009149 405 GIYQDTAVMGADYRAFIEIVFQNDE-DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYI 483 (542)
Q Consensus 405 ~~~~~~~~~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf 483 (542)
+.++.|++++|+|+|.+ .+.||||||||+||||+++.|.+.. ...++.+ .|||||.|+|+++++|||
T Consensus 377 --------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~rDTV~v~pg~~v~I~~ 444 (534)
T 3abg_A 377 --------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GLKDVVWLGRRETVVVEA 444 (534)
T ss_dssp --------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SCBSEECCCSSEEEEEEE
T ss_pred --------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CCcCeEEcCCCCEEEEEE
Confidence 24688999999999987 4699999999999999996553321 1244556 899999999999999999
Q ss_pred E-ecCceeeEEEeechhhhhcceEEEEEEecCC
Q 009149 484 A-LDNVGMWNLRSESWARQYLGQQFYLRVYTAS 515 (542)
Q Consensus 484 ~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 515 (542)
+ +||||.|||||||++|++.|||+.|.|...+
T Consensus 445 ~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 445 HYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp ECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 8 8999999999999999999999999997765
No 12
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.2e-83 Score=679.87 Aligned_cols=408 Identities=20% Similarity=0.220 Sum_probs=319.1
Q ss_pred ecCCCeEEEEEEEEEEEecC-CCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcc
Q 009149 23 SAEDPYRFFNWNVTYGDIYP-LGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYG 101 (542)
Q Consensus 23 ~~~~~~~~~~l~i~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 101 (542)
.+.+.+++|+|++++..+.+ +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++. +++||+|
T Consensus 45 ~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~p- 121 (481)
T 3zx1_A 45 SKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVP--PDQDGSP- 121 (481)
T ss_dssp CCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT-
T ss_pred ccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccC--CccCCCc-
Confidence 46778899999999999985 7999999999999999999999999999999999999999999999875 6799998
Q ss_pred cCCCCCCCCeEEEEEEECCC-ceeeeEecch----hhhhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchhh
Q 009149 102 TTCPIPPGKNFTYILQVKDQ-IGSFYYFPSL----AFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTD 176 (542)
Q Consensus 102 ~q~~i~pG~~~~Y~f~~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~ 176 (542)
||+|+||++|+|+|+++++ +||||||||. +.|+++||+|+|||+++.+...++ +.++ |+|+||+++.+++
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 9999999999999997543 8999999996 589999999999999976543333 4455 9999999986654
Q ss_pred HHHh-hccCCCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCccc-ceeeeeeEEE
Q 009149 177 LRAH-LDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHT-LQTTYSSLDV 254 (542)
Q Consensus 177 ~~~~-~~~~~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~p~~~~~l~l 254 (542)
+... ......+..++.+||||+.. |.++|++|+ ||||||+|+.+.+.|+|+||+|+|||+||.++ +|+.+++|.|
T Consensus 197 ~~~~~~~~~~~g~~gd~~lvNG~~~-p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l 273 (481)
T 3zx1_A 197 IPNNNLNDWLNGREGEFVLINGQFK-PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFL 273 (481)
T ss_dssp CCCCCHHHHHHCCCCSEEEETTEES-CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEE
T ss_pred cccccchhhccCCcCCEEEECCccC-ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEE
Confidence 3200 00001124678999999998 899999998 99999999999999999999999999998765 7999999999
Q ss_pred cCCceEEEEEEeCCCCcceEEEEeeeecC-----CccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCC
Q 009149 255 HVGQSYSVLVTADQPARDYYIVVSSRFTS-----TVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTA 329 (542)
Q Consensus 255 ~pgeR~dv~v~~~~~~g~y~i~~~~~~~~-----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~ 329 (542)
+|||||||+|+++ +++.|.|.+...... .......++++..... ...+|. .|.+
T Consensus 274 ~pgeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~lP~------------------~l~~ 332 (481)
T 3zx1_A 274 SPASRVEVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE--NVELPK------------------NLKI 332 (481)
T ss_dssp CTTCEEEEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC--CCCCCS------------------CSCC
T ss_pred CCccEEEEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCCC--CccCCc------------------cccC
Confidence 9999999999998 578899887533210 0112233333332111 011111 1111
Q ss_pred CCCCCCCCCCCCccccccceEEEecccccccC-----Ce--------EEEEEcCeeecCCCCchhhhcccccCcceecCC
Q 009149 330 SGPRPNPQGSYHYGLINTTKTIRLSSSAGQVN-----GK--------QRYAINSVSFIPADTPLKLADYFKIGGVFRIGS 396 (542)
Q Consensus 330 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--------~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~ 396 (542)
....+ ....+|++.|+..+.... +. ..|+|||+.|... .|
T Consensus 333 ~~~~~---------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~-~~----------------- 385 (481)
T 3zx1_A 333 FKPSE---------EPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLK-RI----------------- 385 (481)
T ss_dssp CCCCC---------CCCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCTT-CC-----------------
T ss_pred CCCCC---------CCCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCCC-Cc-----------------
Confidence 10001 112456777754321000 01 1399999988532 11
Q ss_pred CCCCCCCCCccccceEEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEee--cCCCCCCcCCCCCCCCCCCcceEEEeC
Q 009149 397 ISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGM--DGGQWTSASRNQYNLRDAVARVTVQVY 474 (542)
Q Consensus 397 ~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~--~~g~~~~~~~~~~~~~~p~~rDTv~vp 474 (542)
.+.++.|++|+|+|.|.+.+.|||||||+.|||+++ ++... ...++.|||||.|+
T Consensus 386 ---------------~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~--------~~~~~~~kDTv~v~ 442 (481)
T 3zx1_A 386 ---------------DLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQ--------KAEFRALRDTINVR 442 (481)
T ss_dssp ---------------CEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEEE--------ECSSCCEESEEEEC
T ss_pred ---------------eEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCCC--------CcccCcccceEEEC
Confidence 156889999999999999999999999999999999 43221 12357899999999
Q ss_pred CCCEEEEEEEecCceeeEEEeechhhhhcceEEEEEEe
Q 009149 475 PKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVY 512 (542)
Q Consensus 475 p~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 512 (542)
|+++++|+|+|||||.||||||+++|+|.|||..|+|.
T Consensus 443 Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 443 PNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp TTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 99999999999999999999999999999999999996
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=1.5e-82 Score=684.24 Aligned_cols=428 Identities=14% Similarity=0.131 Sum_probs=323.0
Q ss_pred CCeEEEEEEEEEEEec--CCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCC----------------------Cc
Q 009149 26 DPYRFFNWNVTYGDIY--PLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDE----------------------PF 81 (542)
Q Consensus 26 ~~~~~~~l~i~~~~~~--~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~----------------------~~ 81 (542)
.+...|+|++++.... +++..+.+|+|||++|||+||+++||+|+|+|+|+|++ +|
T Consensus 23 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~t 102 (513)
T 2wsd_A 23 KEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKT 102 (513)
T ss_dssp SSCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCB
T ss_pred CCceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCc
Confidence 3456699999998875 45578999999999999999999999999999999975 89
Q ss_pred eEEeccccCCCCCCCCCCcc--c-CCCCCCCCeE---EEEEEECCCceeeeEecchh----hhhhcceeeEEEEeCCCCC
Q 009149 82 LLSWNGIQNRRNSFEDGVYG--T-TCPIPPGKNF---TYILQVKDQIGSFYYFPSLA----FHKAAGGFGGIRILSRPRI 151 (542)
Q Consensus 82 ~iH~HG~~~~~~~~~DGv~~--~-q~~i~pG~~~---~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~ 151 (542)
+|||||+++. +.+||+|+ + ||+|+||++| +|+|++.+++||||||||.. .|+++||+|+|||+++.+.
T Consensus 103 siHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~ 180 (513)
T 2wsd_A 103 VVHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEK 180 (513)
T ss_dssp CEEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGG
T ss_pred EEEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccc
Confidence 9999999876 57999986 5 8999999555 99999756799999999985 5899999999999997654
Q ss_pred CCCCCCCCCCeEEEEEeeeccchhhHHHhhc-----------cCCCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcC
Q 009149 152 PVPFPDPAGDYTVLIGDWYKSNHTDLRAHLD-----------KGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVG 220 (542)
Q Consensus 152 ~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~ 220 (542)
..++...++|++|+|+||+++.+.++..... .......++.+||||+.. +.++|+++ +|||||||+|
T Consensus 181 ~~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~-p~~~v~~~-~~RlRliNa~ 258 (513)
T 2wsd_A 181 RLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW-PYLEVEPR-KYRFRVINAS 258 (513)
T ss_dssp GGCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES-CEEECCSS-EEEEEEEECC
T ss_pred cccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc-ceEEecCC-EEEEEEEccC
Confidence 4344445789999999999887654321110 011234679999999998 89999984 8999999999
Q ss_pred CCceEEEEEecc-eeEEEeecCccc-ceeeeeeEEEcCCceEEEEEEeCCCCcce-EEEEeeee-cC-CccceEEEEEec
Q 009149 221 LQNSLNFRIQNH-KMKLVEVEGTHT-LQTTYSSLDVHVGQSYSVLVTADQPARDY-YIVVSSRF-TS-TVLTTTGILHYS 295 (542)
Q Consensus 221 ~~~~~~~~i~gh-~~~via~DG~~~-~p~~~~~l~l~pgeR~dv~v~~~~~~g~y-~i~~~~~~-~~-~~~~~~ail~y~ 295 (542)
+++.+.|+|++| +|+|||+||.++ +|+.+++|.|+|||||||+|++++.+|.+ .+...... .. ......++++|.
T Consensus 259 ~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~ 338 (513)
T 2wsd_A 259 NTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQFR 338 (513)
T ss_dssp SSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEE
T ss_pred CcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecccccccCCCCCCcceEEEE
Confidence 999999999999 999999999998 79999999999999999999999767763 33332110 00 112345788887
Q ss_pred CCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecC
Q 009149 296 NSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIP 375 (542)
Q Consensus 296 ~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~ 375 (542)
.+...........|. .+...... +. .....++++.|...+. ..+...|+|||++|..
T Consensus 339 ~~~~~~~~~~~~~p~---------------~l~~~~~~--~~-----~~~~~~~~~~l~~~~~-~~g~~~~~iNg~~~~~ 395 (513)
T 2wsd_A 339 VTKPLAQKDESRKPK---------------YLASYPSV--QH-----ERIQNIRTLKLAGTQD-EYGRPVLLLNNKRWHD 395 (513)
T ss_dssp CCSCCSSCCCCCCCS---------------BCSCCGGG--CC-----CCEEEEEEEEEEEEEC-TTSCEEEEETTBCTTS
T ss_pred eccCcccCccCCCCc---------------cccCCCCc--cc-----CCCcceEEEEEEeecC-CCCCceEeECCccCCC
Confidence 653111000000110 01000000 00 1112456666654332 1345679999999853
Q ss_pred CCCchhhhcccccCcceecCCCCCCCCCCCccccceEEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCC---CC
Q 009149 376 ADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGG---QW 452 (542)
Q Consensus 376 ~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g---~~ 452 (542)
+ . .+.++.|++|+|+|+|.+.+.||||||||+||||+++++ .|
T Consensus 396 ~---~-------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~~~ 441 (513)
T 2wsd_A 396 P---V-------------------------------TETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARY 441 (513)
T ss_dssp C---C-------------------------------CBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHH
T ss_pred c---c-------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCcccccc
Confidence 2 1 024678999999999999899999999999999999752 22
Q ss_pred CCcCC-------CCCCCCCCCcceEEEeCCCCEEEEEEEe-cCceeeEEEeechhhhhcceEEEEEEecC
Q 009149 453 TSASR-------NQYNLRDAVARVTVQVYPKSWSAIYIAL-DNVGMWNLRSESWARQYLGQQFYLRVYTA 514 (542)
Q Consensus 453 ~~~~~-------~~~~~~~p~~rDTv~vpp~g~~~irf~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~ 514 (542)
++... ......++.|||||.|+|+++++|+|+| ||||.|||||||++|++.|||..|+|.++
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 442 QESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp HHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred cccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCC
Confidence 22111 0112234569999999999999999999 89999999999999999999999999754
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=9.7e-82 Score=696.21 Aligned_cols=446 Identities=14% Similarity=0.110 Sum_probs=313.5
Q ss_pred eeecCCCeEEEEEEEEEEEec--CCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCC------------------
Q 009149 21 IVSAEDPYRFFNWNVTYGDIY--PLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEP------------------ 80 (542)
Q Consensus 21 ~~~~~~~~~~~~l~i~~~~~~--~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~------------------ 80 (542)
.+.+....+.|+|++++...+ +++..+.+|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 25 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~ 104 (612)
T 3gyr_A 25 RPASDEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTP 104 (612)
T ss_dssp CCCCSCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSC
T ss_pred CCccCCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCc
Confidence 334455678899999888875 566788999999999999999999999999999999654
Q ss_pred -----------------------ceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecch----hh
Q 009149 81 -----------------------FLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSL----AF 133 (542)
Q Consensus 81 -----------------------~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~----~~ 133 (542)
|+|||||+++. +.+||++ ||+|.||++|+|+|++.+++||||||||. +.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~ 180 (612)
T 3gyr_A 105 APNTEPGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRW 180 (612)
T ss_dssp CGGGSCSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHH
T ss_pred cccccccccccccccccccCCCCceEEcCCCccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchh
Confidence 67899999775 5799988 99999999999999976668999999996 58
Q ss_pred hhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchhhHHHh--h-------c--------cCCCCCCCCeEEEc
Q 009149 134 HKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAH--L-------D--------KGKKLPLPDGILIN 196 (542)
Q Consensus 134 q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~--~-------~--------~~~~~~~~~~~liN 196 (542)
|+++||+|+|||+++.+...+.+.+++|++|+|+||+++.+.++... + . .......++.++||
T Consensus 181 q~~~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vN 260 (612)
T 3gyr_A 181 NVMAGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVN 260 (612)
T ss_dssp HTTTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEET
T ss_pred hhhccceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeec
Confidence 99999999999999766555555678999999999998754432110 0 0 00123456899999
Q ss_pred CCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecc-------eeEEEeecCccc-ceeee------eeEEEcCCceEEE
Q 009149 197 GRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNH-------KMKLVEVEGTHT-LQTTY------SSLDVHVGQSYSV 262 (542)
Q Consensus 197 G~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh-------~~~via~DG~~~-~p~~~------~~l~l~pgeR~dv 262 (542)
|+.. +.+.++. ++|||||||+|+.+.+.|+|++| +|+|||+||.++ +|+.+ ++|.|+|||||||
T Consensus 261 G~~~-p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydV 338 (612)
T 3gyr_A 261 GRIW-PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDL 338 (612)
T ss_dssp TEES-CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEE
T ss_pred CCcc-ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEE
Confidence 9997 8999876 58999999999999999999998 499999999998 46554 5899999999999
Q ss_pred EEEeCCCCcceEEEEeeeecC--------CccceEEEEEecCCCCC--CCCCCCCCCccccc---cccccccccccCCCC
Q 009149 263 LVTADQPARDYYIVVSSRFTS--------TVLTTTGILHYSNSAGP--VSGPIPGGPTVQID---WSLNQARSIRSNLTA 329 (542)
Q Consensus 263 ~v~~~~~~g~y~i~~~~~~~~--------~~~~~~ail~y~~~~~~--~~~~~p~~p~~~~~---~~~~~~~~l~~~l~~ 329 (542)
+|++++.+|.++......... .......+++|...... ....+|........ .......... .+..
T Consensus 339 lV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~ 417 (612)
T 3gyr_A 339 LVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLI-VLTP 417 (612)
T ss_dssp EEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEE-EEEC
T ss_pred EEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccccccccc-cccc
Confidence 999997666555443321111 01233456666543221 11111110000000 0000000000 0000
Q ss_pred CCCCCCCCCCCCccccccceEEEecccc----------------cccCCeEEEEEcCeeecCCCCchhhhcccccCccee
Q 009149 330 SGPRPNPQGSYHYGLINTTKTIRLSSSA----------------GQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFR 393 (542)
Q Consensus 330 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~ 393 (542)
+.... .......+.+.... ........|.+|++.|
T Consensus 418 ----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~-------------------- 468 (612)
T 3gyr_A 418 ----PGTKG-----SGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTF-------------------- 468 (612)
T ss_dssp ----TTCTT-----TTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECST--------------------
T ss_pred ----ccccc-----ccccccccccccccccccccccccceeeeccCCCccccccccCccC--------------------
Confidence 00000 00000000000000 0001112233333332
Q ss_pred cCCCCCCCCCCCccccceEEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcC----------------C
Q 009149 394 IGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSAS----------------R 457 (542)
Q Consensus 394 ~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~----------------~ 457 (542)
.+...+.++.|++|+|+|+|.+.+.||||||||+||||+++++.+.... .
T Consensus 469 --------------~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 534 (612)
T 3gyr_A 469 --------------NDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTP 534 (612)
T ss_dssp --------------TSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEE
T ss_pred --------------CCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccc
Confidence 1223367899999999999999999999999999999999754332110 1
Q ss_pred CCCCCCCCCcceEEEeCCCCEEEEEEE-ecCceeeEEEeechhhhhcceEEEEEEecCCc
Q 009149 458 NQYNLRDAVARVTVQVYPKSWSAIYIA-LDNVGMWNLRSESWARQYLGQQFYLRVYTAST 516 (542)
Q Consensus 458 ~~~~~~~p~~rDTv~vpp~g~~~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 516 (542)
...+..++.|||||.|+++++++|||+ +||||.|||||||++|||.|||+.|+|++|+.
T Consensus 535 ~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 535 VPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp CCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 234567889999999999999999998 69999999999999999999999999998764
No 15
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=8.6e-82 Score=666.50 Aligned_cols=389 Identities=19% Similarity=0.239 Sum_probs=306.3
Q ss_pred eEEEEEEEEEEEecCCCeeeEEEEEcCC-CccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCC
Q 009149 28 YRFFNWNVTYGDIYPLGVRQRGILINWQ-FPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPI 106 (542)
Q Consensus 28 ~~~~~l~i~~~~~~~~G~~~~~~~~Ng~-~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i 106 (542)
.++|+|++ |+|||+ +|||+||+++||+|+|+|+|+|+++++|||||+++. +++||+|+ |+|
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i 81 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAI 81 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCB
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccC
Confidence 55677776 999999 999999999999999999999999999999999875 57999996 999
Q ss_pred CCCCeEEEEEEECCCceeeeEecc----hhhhhhcceeeEEEEeCCCCCCCCCCCCC-CCeEEEEEeeeccchhhHHHh-
Q 009149 107 PPGKNFTYILQVKDQIGSFYYFPS----LAFHKAAGGFGGIRILSRPRIPVPFPDPA-GDYTVLIGDWYKSNHTDLRAH- 180 (542)
Q Consensus 107 ~pG~~~~Y~f~~~~~~Gt~wYH~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~~-~e~~l~l~d~~~~~~~~~~~~- 180 (542)
+||++|+|+|++++++|||||||| ++.|+++||+|+|||+++... .+++ ++ +|++|+|+||+++. +++...
T Consensus 82 ~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~ 158 (448)
T 3aw5_A 82 TPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNP 158 (448)
T ss_dssp CTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCC
T ss_pred CCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-Ccccccc
Confidence 999999999997658999999999 779999999999999997654 2221 24 89999999999987 543210
Q ss_pred -hccCCCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEE--ec---ceeEEEeecCcccc-eeeeeeEE
Q 009149 181 -LDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRI--QN---HKMKLVEVEGTHTL-QTTYSSLD 253 (542)
Q Consensus 181 -~~~~~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i--~g---h~~~via~DG~~~~-p~~~~~l~ 253 (542)
......+..++.+||||+.. +.++|++| +|||||||+|+.+.+.|+| ++ |+|+|||+||.+++ |..++++.
T Consensus 159 ~~~~~~~~~~~~~~liNG~~~-p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~ 236 (448)
T 3aw5_A 159 TPMEMIAGFLGNAVLVNGVKD-AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALF 236 (448)
T ss_dssp CHHHHHHCCCCSEEEETTEET-CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEE
T ss_pred cccccccCccccEEEECCccc-ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEE
Confidence 00011235679999999998 99999999 9999999999999999999 99 99999999999998 99999999
Q ss_pred EcCCceEEEEEEeCCCCcceEEEEeeeecC--------------CccceEEEEEecCCCCCCCCCCCCCCcccccccccc
Q 009149 254 VHVGQSYSVLVTADQPARDYYIVVSSRFTS--------------TVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQ 319 (542)
Q Consensus 254 l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~--------------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~ 319 (542)
|+|||||||+|+++ .+.|+|++...... ......++++|.+..... . |.
T Consensus 237 l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-p~--------- 299 (448)
T 3aw5_A 237 LAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAV-----P-VE--------- 299 (448)
T ss_dssp ECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCC-----C-CC---------
T ss_pred ECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCC-----C-cc---------
Confidence 99999999999998 37899998754310 112345677786543211 0 10
Q ss_pred ccccccCCCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCC
Q 009149 320 ARSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISD 399 (542)
Q Consensus 320 ~~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~ 399 (542)
.|... +.+ +. ....++++.|+.. ...|+|||++|... .|+
T Consensus 300 ------~L~~l-p~~-~~------~~~~~~~~~l~~~------~~~~~iNg~~~~~~-~p~------------------- 339 (448)
T 3aw5_A 300 ------ALSDP-PPE-PP------KPTRTRRFALSLS------GMQWTINGMFWNAS-NPL------------------- 339 (448)
T ss_dssp ------CCSCC-CCC-CC------CCSEEEEEEEEEE------TTEEEETTBCCCTT-CTT-------------------
T ss_pred ------ccCCC-CCC-CC------CCCceEEEEEeCC------CceeeECCCcCCCC-CCc-------------------
Confidence 01000 000 00 1235677777642 13599999998642 121
Q ss_pred CCCCCCccccceEEe-ccCCcEEEEEEEcCC-CCCCCeeecCcceEEEeecCCCCCC-cCCCCC----CCCCCCcceEEE
Q 009149 400 NPTGGGIYQDTAVMG-ADYRAFIEIVFQNDE-DIIQSYHLNGYQFWVVGMDGGQWTS-ASRNQY----NLRDAVARVTVQ 472 (542)
Q Consensus 400 ~p~~~~~~~~~~~~~-~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~-~~~~~~----~~~~p~~rDTv~ 472 (542)
+. ++.|++|+|+|+|.+ .+.||||||||+||||++++ .+.. .....+ +..++.|||||.
T Consensus 340 -------------~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G-~~~~~~~~~~~~~~~~p~~~~~rDTv~ 405 (448)
T 3aw5_A 340 -------------FEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKD-SPRQVAELAVDNRGRLPTDLGLKDTVL 405 (448)
T ss_dssp -------------CCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEES-CCHHHHTTCCSTTCCCGGGGSCBSEEE
T ss_pred -------------eeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecC-CCcccccccccccCCCccccCCccEEE
Confidence 23 678999999999998 89999999999999999963 3321 111112 334568999999
Q ss_pred eCCCCEEEEE--EE---ecCceeeEEEeechhhhhcceEEEEEEe
Q 009149 473 VYPKSWSAIY--IA---LDNVGMWNLRSESWARQYLGQQFYLRVY 512 (542)
Q Consensus 473 vpp~g~~~ir--f~---adnpG~w~~HCHil~H~d~GMm~~~~V~ 512 (542)
|+|+++++|+ |+ +||| |||||||++|++.|||..|+|.
T Consensus 406 v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 406 IWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp ECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred eCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 9999999766 88 8999 9999999999999999999883
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=5.3e-81 Score=661.24 Aligned_cols=412 Identities=20% Similarity=0.242 Sum_probs=311.2
Q ss_pred CCeEEEEEEEEEEEecCCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCC
Q 009149 26 DPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCP 105 (542)
Q Consensus 26 ~~~~~~~l~i~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~ 105 (542)
...+.|+|++++..++++|+++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++.+ .+||+| ||+
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~p--~~~ 90 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPG--EVDGGP--QGI 90 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCH--HHHCCT--TCC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCc--ccCCCC--cCc
Confidence 4467899999999999999999999999999999999999999999999999999999999998864 699998 899
Q ss_pred CCCCCeEEEEEEECCCceeeeEecch----hhhhhcceeeEEEEeCCCCCCCCCCC--CCCCeEEEEEeeeccchhhHHH
Q 009149 106 IPPGKNFTYILQVKDQIGSFYYFPSL----AFHKAAGGFGGIRILSRPRIPVPFPD--PAGDYTVLIGDWYKSNHTDLRA 179 (542)
Q Consensus 106 i~pG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~ 179 (542)
|.||++|+|+|++.+++||||||||. +.|+++||+|+|||+++.....+++. ..+|++|+|+||+++.++++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 99999999999975558999999996 58999999999999997544333321 3468999999999976544321
Q ss_pred hhc--cCCCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEE-ecceeEEEeecCccc-ceeeeeeEEEc
Q 009149 180 HLD--KGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRI-QNHKMKLVEVEGTHT-LQTTYSSLDVH 255 (542)
Q Consensus 180 ~~~--~~~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i-~gh~~~via~DG~~~-~p~~~~~l~l~ 255 (542)
..+ .......++.+||||+.. |.+.+ +|++|||||||+|+++.+.|+| +||+|+|||+||.++ +|+.+++|.|+
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~-p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~ 248 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIY-PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVL 248 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSS-CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEEC
T ss_pred cccccccccCCCCCEEEEcCCcC-ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEEC
Confidence 000 001234679999999997 88877 5689999999999999999999 699999999999986 89999999999
Q ss_pred CCceEEEEEEeCCCCcceEEEEeeeecCC-----ccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCCC
Q 009149 256 VGQSYSVLVTADQPARDYYIVVSSRFTST-----VLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTAS 330 (542)
Q Consensus 256 pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-----~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~ 330 (542)
|||||||+|+++ +.+.|.+++....... ......+++......+....+|. .|.+.
T Consensus 249 pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~------------------~L~~~ 309 (488)
T 3od3_A 249 MGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPD------------------TLSSL 309 (488)
T ss_dssp TTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCS------------------CCCCC
T ss_pred CCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCc------------------ccccC
Confidence 999999999999 5778999875432110 00111222222110000001111 11110
Q ss_pred CCCCCCCCCCCccccccceEEEecccc-------------------cc----------cCCe-------------EEEEE
Q 009149 331 GPRPNPQGSYHYGLINTTKTIRLSSSA-------------------GQ----------VNGK-------------QRYAI 368 (542)
Q Consensus 331 ~~~~~p~~~~~~~~~~~~~~~~~~~~~-------------------~~----------~~~~-------------~~~~i 368 (542)
... |. .....+|++.|.... .. ..|. ..|+|
T Consensus 310 ~~~--~~-----~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~I 382 (488)
T 3od3_A 310 PAL--PS-----LEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKI 382 (488)
T ss_dssp CCC--CC-----CTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEE
T ss_pred CCC--cc-----cccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeE
Confidence 000 10 011134555552110 00 0010 13899
Q ss_pred cCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEeccCCcEEEEEEEcCC-CCCCCeeecCcceEEEee
Q 009149 369 NSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDE-DIIQSYHLNGYQFWVVGM 447 (542)
Q Consensus 369 Ng~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~ 447 (542)
||+.|... .| .+.++.|++|+|.|.|.+ .+.|||||||++|+|+++
T Consensus 383 NG~~~~~~-~~--------------------------------~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~ 429 (488)
T 3od3_A 383 NGQAFDMN-KP--------------------------------MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSE 429 (488)
T ss_dssp TTBCCCTT-CC--------------------------------SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEB
T ss_pred CCeeCCCC-CC--------------------------------ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEecc
Confidence 99998532 12 146899999999999988 679999999999999999
Q ss_pred cCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEec----CceeeEEEeechhhhhcceEEEEEE
Q 009149 448 DGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALD----NVGMWNLRSESWARQYLGQQFYLRV 511 (542)
Q Consensus 448 ~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~ad----npG~w~~HCHil~H~d~GMm~~~~V 511 (542)
++.... ..++.|||||.|+ +++++|+|+|+ |||.||||||+++|||.|||..|+|
T Consensus 430 ~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 430 NGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp TTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred CCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 754322 2346799999999 99999999985 5689999999999999999999986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=3.8e-79 Score=662.72 Aligned_cols=440 Identities=15% Similarity=0.132 Sum_probs=319.0
Q ss_pred CCCeEEEEEEEEEEEec--CCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCC----------------------
Q 009149 25 EDPYRFFNWNVTYGDIY--PLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEP---------------------- 80 (542)
Q Consensus 25 ~~~~~~~~l~i~~~~~~--~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~---------------------- 80 (542)
....++|+|++++.... +++..+.+|+|||++|||||++++||+|+|+++|+|++.
T Consensus 29 ~~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~ 108 (612)
T 2g23_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCccccc
Confidence 45578999999999876 345689999999999999999999999999999999753
Q ss_pred -------------------ceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecchh----hhhhc
Q 009149 81 -------------------FLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLA----FHKAA 137 (542)
Q Consensus 81 -------------------~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~ 137 (542)
+++||||+++.. .+||++ ||+|.||++|+|+|++.+++||||||||.. .|+++
T Consensus 109 ~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~--~~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred ccccccccccccccccCCceEEEcCCCCCCC--ccCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 899999998764 599998 899999999999999755799999999986 49999
Q ss_pred ceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchhh--HHHh-------hcc---C-----CCCCCCCeEEEcCCCC
Q 009149 138 GGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTD--LRAH-------LDK---G-----KKLPLPDGILINGRGS 200 (542)
Q Consensus 138 Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~--~~~~-------~~~---~-----~~~~~~~~~liNG~~~ 200 (542)
||+|+|||+++.+...+++.+++|++|+|+||+++.+.+ +... ... . .....++.+||||+..
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 999999999976544444456899999999999975432 1100 010 0 0124679999999998
Q ss_pred CceEEEecCcEEEEEEEEcCCCceEEEEEecc-------eeEEEeecCccc-ceeeee------eEEEcCCceEEEEEEe
Q 009149 201 GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNH-------KMKLVEVEGTHT-LQTTYS------SLDVHVGQSYSVLVTA 266 (542)
Q Consensus 201 ~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh-------~~~via~DG~~~-~p~~~~------~l~l~pgeR~dv~v~~ 266 (542)
+.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||.++ +|+.++ +|.|+|||||||+|++
T Consensus 265 -p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~ 342 (612)
T 2g23_A 265 -PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDF 342 (612)
T ss_dssp -CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEEC
T ss_pred -CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEEC
Confidence 99999999 9999999999999999999999 899999999999 599999 9999999999999999
Q ss_pred CCCCc-ceEEEEeeeecCC-------ccceEEEEEecCCCCC--CCCCCCCC--C-ccccccccccccccccCCCCCCCC
Q 009149 267 DQPAR-DYYIVVSSRFTST-------VLTTTGILHYSNSAGP--VSGPIPGG--P-TVQIDWSLNQARSIRSNLTASGPR 333 (542)
Q Consensus 267 ~~~~g-~y~i~~~~~~~~~-------~~~~~ail~y~~~~~~--~~~~~p~~--p-~~~~~~~~~~~~~l~~~l~~~~~~ 333 (542)
++.+| +|+|+........ ......|+++...... .+..+|.. + ...+.........+. .+.+
T Consensus 343 ~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~r~~-~~~~---- 417 (612)
T 2g23_A 343 RALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLI-VLTP---- 417 (612)
T ss_dssp TTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEE-EECC----
T ss_pred CCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccceeEE-eecc----
Confidence 97666 6888875321100 0111235555432211 11112210 0 000000000000000 0000
Q ss_pred CCCCCCCCccccccceEEEecccc---------------cccCC-eEEEEEcCeeecCCCCchhhhcccccCcceecCCC
Q 009149 334 PNPQGSYHYGLINTTKTIRLSSSA---------------GQVNG-KQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSI 397 (542)
Q Consensus 334 ~~p~~~~~~~~~~~~~~~~~~~~~---------------~~~~~-~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~ 397 (542)
|. . .+.....+.+.+.... ...+| ...|+|||+.|...
T Consensus 418 --~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~~--------------------- 471 (612)
T 2g23_A 418 --PG-T--KGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFNDG--------------------- 471 (612)
T ss_dssp --TT-C--TTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTSC---------------------
T ss_pred --cc-c--cccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCCC---------------------
Confidence 00 0 0000001111111100 00012 24578888877421
Q ss_pred CCCCCCCCccccceEEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCC---Cc-------------CCCCCC
Q 009149 398 SDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWT---SA-------------SRNQYN 461 (542)
Q Consensus 398 ~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~---~~-------------~~~~~~ 461 (542)
..+.++.|++|+|+|.|.+.+.|||||||+.|+|++++++.++ .. ....++
T Consensus 472 -------------~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~ 538 (612)
T 2g23_A 472 -------------LGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLA 538 (612)
T ss_dssp -------------CCEEEETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCC
T ss_pred -------------CceEecCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCC
Confidence 1256889999999999999999999999999999998643221 10 002245
Q ss_pred CCCCCcceEEEeCCCCEEEEEEEec-CceeeEEEeechhhhhcceEEEEEEecC
Q 009149 462 LRDAVARVTVQVYPKSWSAIYIALD-NVGMWNLRSESWARQYLGQQFYLRVYTA 514 (542)
Q Consensus 462 ~~~p~~rDTv~vpp~g~~~irf~ad-npG~w~~HCHil~H~d~GMm~~~~V~~~ 514 (542)
..++.|||||.|+|+++++|+|+|+ |||.|||||||++|+|.|||..|+|...
T Consensus 539 ~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~ 592 (612)
T 2g23_A 539 PNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPP 592 (612)
T ss_dssp TTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECH
T ss_pred cccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECch
Confidence 5677899999999999999999999 9999999999999999999999999754
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=3.3e-53 Score=489.63 Aligned_cols=389 Identities=13% Similarity=0.150 Sum_probs=268.7
Q ss_pred eecCCCeEEEEEEEEEEEec--CCCe--------------------------eeEEE-------EEcCC--------Ccc
Q 009149 22 VSAEDPYRFFNWNVTYGDIY--PLGV--------------------------RQRGI-------LINWQ--------FPG 58 (542)
Q Consensus 22 ~~~~~~~~~~~l~i~~~~~~--~~G~--------------------------~~~~~-------~~Ng~--------~pg 58 (542)
..+.+.+|+|-+.|.+..+. +.|. .+.+. +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 44557899999999999874 3222 22333 57877 999
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEeccccCC----CCCCCCCCcc--c-CCCCCCCCeEEEEEEECCC---------c
Q 009149 59 PDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNR----RNSFEDGVYG--T-TCPIPPGKNFTYILQVKDQ---------I 122 (542)
Q Consensus 59 P~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~----~~~~~DGv~~--~-q~~i~pG~~~~Y~f~~~~~---------~ 122 (542)
|+||+++||+|+|+|+|+|+++++|||||++++ +.+++||+++ + ||+|+||++|+|+|++.++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999887 4567888887 6 9999999999999998654 5
Q ss_pred eeeeEecchhh--hhhcceeeEEEEeCCCCCCCCCC-CCCCCeEEEEEee------eccchhhHHHhh-ccCCC------
Q 009149 123 GSFYYFPSLAF--HKAAGGFGGIRILSRPRIPVPFP-DPAGDYTVLIGDW------YKSNHTDLRAHL-DKGKK------ 186 (542)
Q Consensus 123 Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~l~d~------~~~~~~~~~~~~-~~~~~------ 186 (542)
||||||||.+. |+.+||+|+|||+++.....|.+ ..|+|++|+|+|| ++... +..++ +++..
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~~~~~ 252 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDKDNED 252 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCTTCHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccccccc
Confidence 99999999874 56899999999999764332322 3478999999954 43211 11111 11100
Q ss_pred -CCCCCeEEEcCCCC--CceEEEecCcEEEEEEEEcCCC-ceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEE
Q 009149 187 -LPLPDGILINGRGS--GAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSV 262 (542)
Q Consensus 187 -~~~~~~~liNG~~~--~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv 262 (542)
...++.++|||+.. .+.++|++|++|||||+|+|.. ..+.|+|+||+|+ ++|..+|+|.|+||||+||
T Consensus 253 ~~~~~~~~~iNG~~~~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer~dV 324 (1065)
T 2j5w_A 253 FQQSNRMYSVNGYTFGSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATLFDA 324 (1065)
T ss_dssp HHHHTEEEEETTEETTCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBTCEEEE
T ss_pred ccccCcEEEECCccCCCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCCcEEEE
Confidence 01235799999973 3789999999999999999986 6899999999999 3567899999999999999
Q ss_pred EEEeCCCCcceEEEEeeeecCCccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCCCCC------CCCC
Q 009149 263 LVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGP------RPNP 336 (542)
Q Consensus 263 ~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~------~~~p 336 (542)
+|++++ +|.|+|+|+...-. .....+.+.|.+...+++.+.|..+ ....+ ...++.+.|++.+... .+.+
T Consensus 325 lv~~~~-pG~y~i~~h~~~h~-~~Gm~~~~~V~~~~~~~~~~~~~g~-~~~~~-~i~A~e~~wdy~~~~~~~~~~~~~~~ 400 (1065)
T 2j5w_A 325 YMVAQN-PGEWMLSCQNLNHL-KAGLQAFFQVQECNKSSSKDNIRGK-HVRHY-YIAAEEIIWNYAPSGIDIFTKENLTA 400 (1065)
T ss_dssp EEECCS-CEEEEEEECSHHHH-HTTCEEEEEEECSCCCCCCCCCTTS-EEEEE-EEEEEEEEEESCTTSBCTTTCCBTTC
T ss_pred EEEeCC-CeeEEEEecCcchh-hCCCEEEEEEecCCCcccccccccc-ceeEE-EEeceecccccCCCCcccccccccCC
Confidence 999995 89999999865311 1245678888765543322222221 11122 3456777777776542 1222
Q ss_pred CCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEecc
Q 009149 337 QGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGAD 416 (542)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 416 (542)
+++. ...+ |.......+++++..++ ++|.+. +|+.. .+..|.......-.+++.++
T Consensus 401 ~~s~-------~~~~-l~~~~~~ig~~y~k~v~-~~y~d~--------------~f~~~-~~~~~~~~~~g~lgpvi~a~ 456 (1065)
T 2j5w_A 401 PGSD-------SAVF-FEQGTTRIGGSYKKLVY-REYTDA--------------SFTNR-KERGPEEEHLGILGPVIWAE 456 (1065)
T ss_dssp TTCT-------THHH-HCCBTTBCCSEEEEEEE-EEESST--------------TCCSB-CCCCGGGGGGTTSCCCEEEE
T ss_pred Cccc-------chhh-hccCCcccCceEeeeee-ecccCC--------------ceEEc-CcCCcccccccccCceEEEe
Confidence 2211 1112 22222234555555555 555421 12111 01111100111235678999
Q ss_pred CCcEEEEEEEcCCCCCCCeeecCcceEEEeec
Q 009149 417 YRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMD 448 (542)
Q Consensus 417 ~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~ 448 (542)
.|++++++|.|.....|+||+||+.|++++.|
T Consensus 457 ~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g 488 (1065)
T 2j5w_A 457 VGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEG 488 (1065)
T ss_dssp TTEEEEEEEEECSSSCBCCEEESSBCCGGGCS
T ss_pred CCCEEEEEEEECCCCCccCcccceeeeccCCC
Confidence 99999999999999999999999999987753
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=2.1e-53 Score=429.91 Aligned_cols=265 Identities=21% Similarity=0.321 Sum_probs=224.0
Q ss_pred CeEEEEEEEEEEEecC-CCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCccc-CC
Q 009149 27 PYRFFNWNVTYGDIYP-LGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGT-TC 104 (542)
Q Consensus 27 ~~~~~~l~i~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~ 104 (542)
.+|+|+|++++..+.+ +|..+.+|+|||++|||+||+++||+|+|+|+|.++.+++|||||+.+..++++||+|++ ||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4799999999999875 688899999999999999999999999999999999999999999999887799999999 99
Q ss_pred CCCCCCeEEEEEEECCCceeeeEecchhhhh---hcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchhhHHHhh
Q 009149 105 PIPPGKNFTYILQVKDQIGSFYYFPSLAFHK---AAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHL 181 (542)
Q Consensus 105 ~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~---~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 181 (542)
+|+||++++|+|++ +++||||||||...+. .+||+|+|||+++...+.+. ..++|++|+|+||+++......
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~~--- 155 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANKPG--- 155 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTCTT---
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccccccccc---
Confidence 99999999999996 7899999999987543 58999999999865322111 3488999999999876432211
Q ss_pred ccCCCCCCCCeEEEcCCCC--CceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCccc-ceeeeeeEEEcCCc
Q 009149 182 DKGKKLPLPDGILINGRGS--GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHT-LQTTYSSLDVHVGQ 258 (542)
Q Consensus 182 ~~~~~~~~~~~~liNG~~~--~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~p~~~~~l~l~pge 258 (542)
..+.....++.++|||+.. ...+++++|++|||||+|++.. .+.|||+||.|+||+.||.++ +|..+|++.|.|||
T Consensus 156 ~~~~~~~~~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pge 234 (318)
T 3g5w_A 156 EGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGE 234 (318)
T ss_dssp CCCCTTCCCCEEEETTBCBTSSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTC
T ss_pred cCCCCCCcCcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECCCC
Confidence 1122224578999999974 1349999999999999999975 689999999999999999998 68899999999999
Q ss_pred eEEEEEEeCCCCcceEEEEeeeecCC-----ccceEEEEEecCCC
Q 009149 259 SYSVLVTADQPARDYYIVVSSRFTST-----VLTTTGILHYSNSA 298 (542)
Q Consensus 259 R~dv~v~~~~~~g~y~i~~~~~~~~~-----~~~~~ail~y~~~~ 298 (542)
|+||+++++ .+|.|.++|+...-.. .....++|.|++..
T Consensus 235 r~~v~~~a~-~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 235 RYDVILNMD-NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEEEEECC-SCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEEEEECC-CCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999998 6999999999653221 13456889998754
No 20
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=3.7e-55 Score=486.82 Aligned_cols=237 Identities=14% Similarity=0.177 Sum_probs=180.1
Q ss_pred EEEEEEEEEEecC-CCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcc-------
Q 009149 30 FFNWNVTYGDIYP-LGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYG------- 101 (542)
Q Consensus 30 ~~~l~i~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~------- 101 (542)
...|.+++..... .|+.+..|+ ++|||+||+++||+|+|+|+|+|+++++|||||+++. +.+||+|+
T Consensus 48 ~k~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~--~~~DG~p~~Dg~~~~ 122 (742)
T 2r7e_A 48 KKTLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYW--KASEGAEYDDQTSQR 122 (742)
T ss_dssp ECCCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCC--SSSSCCCSSCSCCSS
T ss_pred EEEEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccC--ccccCCccCCCCccc
Confidence 3345555544443 366666654 8999999999999999999999999999999999875 34555553
Q ss_pred -c-CCCCCCCCeEEEEEEECC---------CceeeeEecchhh--hhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEe
Q 009149 102 -T-TCPIPPGKNFTYILQVKD---------QIGSFYYFPSLAF--HKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGD 168 (542)
Q Consensus 102 -~-q~~i~pG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d 168 (542)
+ ||+|+||++|+|+|++++ ++||||||||.+. |+.+||+|+|||+++...........+|++|++++
T Consensus 123 ~vtq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~ 202 (742)
T 2r7e_A 123 EKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAV 202 (742)
T ss_dssp SSSSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEEC
T ss_pred ccccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeec
Confidence 6 999999999999999853 4699999999874 89999999999999754321111123788888764
Q ss_pred ------eeccchhhHHHhhccCCCCCCCCeEEEcCCC--CCceEEEecCcEEEEEEEEcCCCc-eEEEEEecceeEEEee
Q 009149 169 ------WYKSNHTDLRAHLDKGKKLPLPDGILINGRG--SGAAFNVEQGKTYRLRISNVGLQN-SLNFRIQNHKMKLVEV 239 (542)
Q Consensus 169 ------~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~--~~~~~~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~ 239 (542)
|+++........+.........+.++|||+. ..+.+++++|++|||||+|++... .+.|||+||.|+|++.
T Consensus 203 ~de~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~ 282 (742)
T 2r7e_A 203 FDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNRSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH 282 (742)
T ss_dssp CCCSSSSCCCCCC-------CCSCCCCCCCCEETTBCTBCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE
T ss_pred ccCCccccccccccccccCCCccccccCceEEECCccCCCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE
Confidence 4333211100001111122345778999997 246799999999999999999875 7899999999999852
Q ss_pred cCcccceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009149 240 EGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 240 DG~~~~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
.+|++.|.|||+++|+++++ .+|.|+++|+..
T Consensus 283 --------~~Dtv~v~Pg~~~~v~~~~~-~pG~w~~hCH~~ 314 (742)
T 2r7e_A 283 --------RQASLEISPITFLTAQTLLM-DLGQFLLFCHIS 314 (742)
T ss_dssp --------ECCSCCCCTTCCCEEEECCC-SCSEECCCCCSS
T ss_pred --------ecceEEeCCCcEEEEEEEeC-CCeeEEEEeCCh
Confidence 47889999999999999998 699999999864
No 21
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=7.2e-52 Score=423.11 Aligned_cols=265 Identities=21% Similarity=0.368 Sum_probs=223.3
Q ss_pred CeEEEEEEEEEEEecC-CCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCccc-CC
Q 009149 27 PYRFFNWNVTYGDIYP-LGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGT-TC 104 (542)
Q Consensus 27 ~~~~~~l~i~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~ 104 (542)
.+++|+|++++..+.+ +|.++.+|+|||++|||+|+|++||+|+|+|+|.+.++++|||||+.+...+++||+|++ ||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 4689999999999886 599999999999999999999999999999999999999999999999988889999999 99
Q ss_pred CCCCCCeEEEEEEECCCceeeeEecchhh--hhh-cceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchhhHHHhh
Q 009149 105 PIPPGKNFTYILQVKDQIGSFYYFPSLAF--HKA-AGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHL 181 (542)
Q Consensus 105 ~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~--q~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 181 (542)
+|+||++|+|+|++ +++||||||||... |+. +||+|+|||+++.....+. ..++|++++|+||+........
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~~~~~~--- 156 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAVADKYG--- 156 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGGTTCTT---
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheecccccccC---
Confidence 99999999999996 68999999999864 888 9999999999865432221 3378999999999864221100
Q ss_pred ccCCCCCCCCeEEEcCCCCC--ceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccc-eeeeeeEEEcCCc
Q 009149 182 DKGKKLPLPDGILINGRGSG--AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTL-QTTYSSLDVHVGQ 258 (542)
Q Consensus 182 ~~~~~~~~~~~~liNG~~~~--~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~-p~~~~~l~l~pge 258 (542)
..+.....++.++|||+... ..+++++|++|||||+|++.. .+.|||+||+|+||+.||.+++ |..+|++.|.|||
T Consensus 157 ~~g~~~~~~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~ 235 (339)
T 2zwn_A 157 EGGTPMNVADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGE 235 (339)
T ss_dssp CCCSTTSCCCEEEETTBCTTSSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTC
T ss_pred CCCCCccccceEEEccccCCCcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCC
Confidence 01111225789999999752 349999999999999999964 8999999999999999999986 8889999999999
Q ss_pred eEEEEEEeCCCCcceEEEEeeeec-----CCccceEEEEEecCCC
Q 009149 259 SYSVLVTADQPARDYYIVVSSRFT-----STVLTTTGILHYSNSA 298 (542)
Q Consensus 259 R~dv~v~~~~~~g~y~i~~~~~~~-----~~~~~~~ail~y~~~~ 298 (542)
|++|+|+++ .+|.|+++|+...- .......++|+|++..
T Consensus 236 r~~v~~~~~-~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 236 RYDVIIEAD-NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEEEEECC-SCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEEeC-CCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 999999998 68999999986531 1223457899998754
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=4.2e-51 Score=434.26 Aligned_cols=403 Identities=16% Similarity=0.144 Sum_probs=267.6
Q ss_pred eeeecCCCeEEEEEEEEEEEecCCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCC
Q 009149 20 AIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGV 99 (542)
Q Consensus 20 ~~~~~~~~~~~~~l~i~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv 99 (542)
..+.+.+.++++++.+++.....+| .+.+|||++ ||+|+|++||+|+|+++|.+...+++||||....
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~-------- 87 (447)
T 2dv6_A 20 TAGAHAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAAR-------- 87 (447)
T ss_dssp ----CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTEE--------
T ss_pred ccccCCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCcc--------
Confidence 3344555667777777655555444 356899999 9999999999999999999987899999996311
Q ss_pred cccCCCCCCCCeEEEEEEECCCceeeeEecchhhhhhcceeeEEEEeCCCCCCCCC--C---CCCCCeEEEEEeeeccch
Q 009149 100 YGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPF--P---DPAGDYTVLIGDWYKSNH 174 (542)
Q Consensus 100 ~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~--~---~~~~e~~l~l~d~~~~~~ 174 (542)
.||+|.||++++|.|++ .++||||||||...|+.+||+|.|+|+++....... + ....+++..+ |+.....
T Consensus 88 --~~~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~ 163 (447)
T 2dv6_A 88 --SAIVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKT 163 (447)
T ss_dssp --CCCBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCE
T ss_pred --cceecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcE
Confidence 17999999999999996 569999999999999999999999999865422100 0 0000111000 1000000
Q ss_pred h--hHHH-hhccC-CCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcCC-CceEEEEEecceeEEEeecCcccceeee
Q 009149 175 T--DLRA-HLDKG-KKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGL-QNSLNFRIQNHKMKLVEVEGTHTLQTTY 249 (542)
Q Consensus 175 ~--~~~~-~~~~~-~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~-~~~~~~~i~gh~~~via~DG~~~~p~~~ 249 (542)
. .+.. ..... ..+...+.+++||+...|.|++++|++|||||+|.+. ...+.+++||. ++.||.+
T Consensus 164 ~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~------ 233 (447)
T 2dv6_A 164 VRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA------ 233 (447)
T ss_dssp EEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG------
T ss_pred EEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC------
Confidence 0 0000 00000 0112346899999975599999999999999999986 34566777663 3679873
Q ss_pred eeEEEcCCceEEEEEEeCCCCcceEEEEeeeec-CC-ccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCC
Q 009149 250 SSLDVHVGQSYSVLVTADQPARDYYIVVSSRFT-ST-VLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNL 327 (542)
Q Consensus 250 ~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l 327 (542)
+++.|.||||++++++++ .+|.||++|+.... .+ .....+.+.|.+.. .+|. .+....+. ..+ +..
T Consensus 234 ~~~~i~pG~~~~~~~~~~-~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~-----~~P~---~d~~~~~~-~~~--~~~ 301 (447)
T 2dv6_A 234 AFTQTDPGEETVVTFKAL-IPGIYVYHCATPSVPTHITNGMYGLLLVEPEG-----GLPQ---VDREFYVM-QGE--IYT 301 (447)
T ss_dssp GGCCBCTTCEEEEEEECC-SCEEEEEECCSSSHHHHHHTTCEEEEEEECTT-----CSCC---CSEEEEEE-EEE--ECB
T ss_pred ccEEeCCCCEEEEEEECC-CCeEEEEEeCCCChHHHHhCCCEEEEEEeCCC-----CCCC---CCeeEEEE-ecc--ccc
Confidence 234599999999999998 57999999975211 11 12345677776432 1221 11110000 000 000
Q ss_pred CCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCcc
Q 009149 328 TASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIY 407 (542)
Q Consensus 328 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~ 407 (542)
... .. ... .. .+.+.... ......|+|||+.+....
T Consensus 302 ~~~--~~-~~g-----~~----~~~~~~~~--~~~~~~~~iNG~~~~~~~------------------------------ 337 (447)
T 2dv6_A 302 VKS--FG-TSG-----EQ----EMDYEKLI--NEKPEYFLFNGSVGSLTR------------------------------ 337 (447)
T ss_dssp SSC--TT-CCE-----EC----CBBHHHHH--TTCCSEEEETTSTTCCCC------------------------------
T ss_pred CCc--cc-ccc-----cc----cCChHHhh--ccCCCEEEECCcccCCCC------------------------------
Confidence 000 00 000 00 00000000 012346899998763210
Q ss_pred ccceEEeccCCcEEEEEEEcCC-CCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCC-cceEEEeCCCCEEEEEEEe
Q 009149 408 QDTAVMGADYRAFIEIVFQNDE-DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAV-ARVTVQVYPKSWSAIYIAL 485 (542)
Q Consensus 408 ~~~~~~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~-~rDTv~vpp~g~~~irf~a 485 (542)
...+.++.|++++|+|.|.+ ...||||||||+|+||+++++.. ..|. +|||+.|+++++++|+|++
T Consensus 338 --~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~----------~~p~~~~dtv~l~pg~r~~i~~~~ 405 (447)
T 2dv6_A 338 --SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVV----------SPPLIGVQTVSVPPGGATIVDFKI 405 (447)
T ss_dssp --CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSS----------SCCEEEESEEEECTTEEEEEEEEC
T ss_pred --CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCccc----------CCCcccccEEEECCCcEEEEEEEC
Confidence 12367899999999999987 57899999999999999975421 2344 7999999999999999999
Q ss_pred cCceeeEEEeechhhhhcceEEEEEEecCCc
Q 009149 486 DNVGMWNLRSESWARQYLGQQFYLRVYTAST 516 (542)
Q Consensus 486 dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 516 (542)
+|||.|+||||+++|++.||++.++|.....
T Consensus 406 ~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 406 DRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp CSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred CCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 9999999999999999999999999976654
No 23
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=9.2e-50 Score=395.99 Aligned_cols=244 Identities=17% Similarity=0.164 Sum_probs=195.5
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCccc-
Q 009149 24 AEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGT- 102 (542)
Q Consensus 24 ~~~~~~~~~l~i~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~- 102 (542)
+...+|+|+|+|++.. .+.....+++|||++|||+||+++||+|+|+|+|+|+++++|||||+++.. .+||++ +
T Consensus 3 ~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~-~t 77 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MN 77 (276)
T ss_dssp -CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TT
T ss_pred CcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCc-CC
Confidence 4567899999999743 344445678899999999999999999999999999999999999998864 699999 6
Q ss_pred CCCCCCCCeEEEEEEECC------------CceeeeEecchh------hhhhcceeeEEEEeCCCCCCCCCCCCCCCeEE
Q 009149 103 TCPIPPGKNFTYILQVKD------------QIGSFYYFPSLA------FHKAAGGFGGIRILSRPRIPVPFPDPAGDYTV 164 (542)
Q Consensus 103 q~~i~pG~~~~Y~f~~~~------------~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l 164 (542)
||+|+||++|+|+|++.+ ++||||||||.. .|+.+||+|+|||+++... .. |+|++|
T Consensus 78 ~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~--~~---drE~~l 152 (276)
T 3kw8_A 78 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--LP---DATHTI 152 (276)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--CC---SEEEEE
T ss_pred cCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc--cc---ccceEE
Confidence 999999999999999753 379999999983 6999999999999986532 11 555555
Q ss_pred EEEeeeccchhhHHHhhccCCCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCccc
Q 009149 165 LIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHT 244 (542)
Q Consensus 165 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~ 244 (542)
++++|
T Consensus 153 ~l~~~--------------------------------------------------------------------------- 157 (276)
T 3kw8_A 153 VFNDM--------------------------------------------------------------------------- 157 (276)
T ss_dssp EEETT---------------------------------------------------------------------------
T ss_pred Eeccc---------------------------------------------------------------------------
Confidence 43210
Q ss_pred ceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeeeecCCccceEEEEEecCCCCCCCCCCCCCCccccccccccccccc
Q 009149 245 LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIR 324 (542)
Q Consensus 245 ~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~ 324 (542)
T Consensus 158 -------------------------------------------------------------------------------- 157 (276)
T 3kw8_A 158 -------------------------------------------------------------------------------- 157 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCC
Q 009149 325 SNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGG 404 (542)
Q Consensus 325 ~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~ 404 (542)
+|||+.|. ..|
T Consensus 158 ------------------------------------------~iNG~~~~--~~p------------------------- 168 (276)
T 3kw8_A 158 ------------------------------------------TINNRKPH--TGP------------------------- 168 (276)
T ss_dssp ------------------------------------------EETTCCTT--CCC-------------------------
T ss_pred ------------------------------------------ccceeccc--CCC-------------------------
Confidence 11121111 000
Q ss_pred CccccceEEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEE
Q 009149 405 GIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIA 484 (542)
Q Consensus 405 ~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~ 484 (542)
.+.++.|++|+|+|.|.+.+.|||||||+.|+|++. |.++.. ...+.++||+.|.|++++.++|+
T Consensus 169 -------~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~--G~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~ 233 (276)
T 3kw8_A 169 -------DFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTGP------DDPSRVIDNKITGPADSFGFQII 233 (276)
T ss_dssp -------CEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCST------TCCCCEESEEEECTTCEEEEEEE
T ss_pred -------CEEEecCCEEEEEEecCCCcceeEEEccceeEEecc--CccCCC------cccccCCccEEeCCCceEEEEEE
Confidence 145778899999999998889999999999999763 333221 12346999999999999999999
Q ss_pred ec---CceeeEEEeechhhhhcceEEEEEEecCCc
Q 009149 485 LD---NVGMWNLRSESWARQYLGQQFYLRVYTAST 516 (542)
Q Consensus 485 ad---npG~w~~HCHil~H~d~GMm~~~~V~~~~~ 516 (542)
++ |||.|+||||+++|++.|||..|.|.++++
T Consensus 234 ~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 234 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 97 899999999999999999999999988765
No 24
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=4.6e-49 Score=400.39 Aligned_cols=260 Identities=20% Similarity=0.259 Sum_probs=220.7
Q ss_pred ecCCCeEEEEEEEEEEEecC-CCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCC--CCceEEeccccCCCCCCCCCC
Q 009149 23 SAEDPYRFFNWNVTYGDIYP-LGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLD--EPFLLSWNGIQNRRNSFEDGV 99 (542)
Q Consensus 23 ~~~~~~~~~~l~i~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~--~~~~iH~HG~~~~~~~~~DGv 99 (542)
.+.+.+++|+|++++..+.+ +|..+.+|+|||++|||+|++++||+|+|+++|.++ ..+++||||+. .+||+
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~ 107 (327)
T 1kbv_A 33 RDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGG 107 (327)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGG
T ss_pred cCCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCC
Confidence 35668899999999999987 899999999999999999999999999999999996 58999999984 37887
Q ss_pred cccCCCCCCCCeEEEEEEECCCceeeeEecch---hhhhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchhh
Q 009149 100 YGTTCPIPPGKNFTYILQVKDQIGSFYYFPSL---AFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTD 176 (542)
Q Consensus 100 ~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~ 176 (542)
+.. ..|.||++++|+|++ +++||||||||. ..|+.+||+|+|||+++.. . +..|+|++++++||++.....
T Consensus 108 ~~~-~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~--~--p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 108 AAA-TFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG--L--PKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TTT-TCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--C--CCCSEEEEEEEEEECBSSCTT
T ss_pred Ccc-eeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC--C--CCCceEEEEEeeeeeccCccc
Confidence 643 359999999999996 789999999996 5899999999999998642 1 234889999999999875210
Q ss_pred --------HHHhhccCCCCCCCCeEEEcCCCCC----ceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCccc
Q 009149 177 --------LRAHLDKGKKLPLPDGILINGRGSG----AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHT 244 (542)
Q Consensus 177 --------~~~~~~~~~~~~~~~~~liNG~~~~----~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~ 244 (542)
+... ....++.++|||+... +.+++++|++|||||+|+|+.+.+.|||+||+|+||+.||.++
T Consensus 182 ~~g~~~~~~~~~-----~~~~~~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~ 256 (327)
T 1kbv_A 182 AQGLQPFDMDKA-----VAEQPEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKL 256 (327)
T ss_dssp CCEEECBCHHHH-----HHTCCSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC
T ss_pred cccccccChhHh-----ccCCCceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcC
Confidence 1110 1135689999999862 4699999999999999999989999999999999999999999
Q ss_pred ceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeeeecCCccceEEEEEecCCCC
Q 009149 245 LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAG 299 (542)
Q Consensus 245 ~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~ 299 (542)
+|..++++.|+||||+||+|+++ .+|.|+|+|+...........|+|+|++...
T Consensus 257 ~p~~~d~l~l~pGer~dv~v~~~-~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 257 INENVQSTIVPAGGSAIVEFKVD-IPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 310 (327)
T ss_dssp EECSBSEEEECTTEEEEEEEEEC-SCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred CCCceeEEEECCCCEEEEEEEeC-CCeEEEEEeccccccccCCcEEEEEECCCCC
Confidence 99999999999999999999999 5899999998654321234689999987653
No 25
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=4.4e-49 Score=397.88 Aligned_cols=245 Identities=18% Similarity=0.167 Sum_probs=194.7
Q ss_pred cCCCeEEEEEEEEEEEecCCCee-eEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCccc
Q 009149 24 AEDPYRFFNWNVTYGDIYPLGVR-QRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGT 102 (542)
Q Consensus 24 ~~~~~~~~~l~i~~~~~~~~G~~-~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (542)
+...+|+++|.+++ .++|.. ..++.+||++|||+||+++||+|+|+|+|+|++++||||||+++. +.+||++..
T Consensus 9 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~~~ 83 (313)
T 3tas_A 9 AGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGTKQS 83 (313)
T ss_dssp CCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCSTTT
T ss_pred CCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCCccc
Confidence 45577888887652 355644 456778999999999999999999999999999999999999775 569999966
Q ss_pred CCCCCCCCeEEEEEEEC------------CCceeeeEecchh------hhhhcceeeEEEEeCCCCCCCCCCCCCCCeEE
Q 009149 103 TCPIPPGKNFTYILQVK------------DQIGSFYYFPSLA------FHKAAGGFGGIRILSRPRIPVPFPDPAGDYTV 164 (542)
Q Consensus 103 q~~i~pG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l 164 (542)
||+|+||++|+|+|++. .++||||||||.. .|+.+||+|+|||+++.. ..+ |+|++|
T Consensus 84 ~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--~~~---d~e~~l 158 (313)
T 3tas_A 84 RSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--VLP---DRTHTI 158 (313)
T ss_dssp TCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--BCC---SEEEEE
T ss_pred cCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc--ccc---ccccee
Confidence 99999999999999852 3689999999964 468999999999998653 223 777777
Q ss_pred EEEeeeccchhhHHHhhccCCCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCccc
Q 009149 165 LIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHT 244 (542)
Q Consensus 165 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~ 244 (542)
+++||+ +||+.
T Consensus 159 ~~~d~t------------------------~Ng~~--------------------------------------------- 169 (313)
T 3tas_A 159 VFNDMT------------------------INNRP--------------------------------------------- 169 (313)
T ss_dssp EEETTE------------------------ETTCC---------------------------------------------
T ss_pred eccchh------------------------cccCC---------------------------------------------
Confidence 776541 11110
Q ss_pred ceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeeeecCCccceEEEEEecCCCCCCCCCCCCCCccccccccccccccc
Q 009149 245 LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIR 324 (542)
Q Consensus 245 ~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~ 324 (542)
.+..+
T Consensus 170 ------------------------------------------------------------~~~~~--------------- 174 (313)
T 3tas_A 170 ------------------------------------------------------------AHTGP--------------- 174 (313)
T ss_dssp ------------------------------------------------------------TTCCC---------------
T ss_pred ------------------------------------------------------------ccccc---------------
Confidence 00000
Q ss_pred cCCCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCC
Q 009149 325 SNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGG 404 (542)
Q Consensus 325 ~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~ 404 (542)
+
T Consensus 175 ------------------------------------------------------~------------------------- 175 (313)
T 3tas_A 175 ------------------------------------------------------D------------------------- 175 (313)
T ss_dssp ------------------------------------------------------C-------------------------
T ss_pred ------------------------------------------------------c-------------------------
Confidence 0
Q ss_pred CccccceEEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEE
Q 009149 405 GIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIA 484 (542)
Q Consensus 405 ~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~ 484 (542)
+.++.|++|+|+|.|.+.+.||||||||.|+|+.++.... ....+.++||+.|.|++.+.+++.
T Consensus 176 --------l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~~--------~~~~~~~~Dtv~l~Pger~~v~v~ 239 (313)
T 3tas_A 176 --------FEATVGDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLTG--------PDDPSQVIDNKICGPADSFGFQVI 239 (313)
T ss_dssp --------EEEETTCEEEEEEEEESSCCEEEEETTCCEESSTTSSCCS--------TTCCCCEESEEEECTTCEEEEEEE
T ss_pred --------cccccCCEEEEEEecccccceeeeecCCeeEEEEECCccC--------CCCCCeeeeEEEeCCCcceEEEEE
Confidence 2345677889999999989999999999999998764321 123567999999999999988876
Q ss_pred e---cCceeeEEEeechhhhhcceEEEEEEecCCcc
Q 009149 485 L---DNVGMWNLRSESWARQYLGQQFYLRVYTASTS 517 (542)
Q Consensus 485 a---dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~ 517 (542)
+ +|||.|+||||+++|++.|||..|+|.+++..
T Consensus 240 a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~~ 275 (313)
T 3tas_A 240 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 275 (313)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTCC
T ss_pred eccCCCCEeEEEEeCChHHHHCCCeEEEEEECCCCC
Confidence 5 68999999999999999999999999988763
No 26
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=4.1e-49 Score=395.09 Aligned_cols=250 Identities=16% Similarity=0.157 Sum_probs=189.8
Q ss_pred eeeeecCCCeEEEEEEEEEEEecCCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCC
Q 009149 19 FAIVSAEDPYRFFNWNVTYGDIYPLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDG 98 (542)
Q Consensus 19 ~~~~~~~~~~~~~~l~i~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DG 98 (542)
.+..++.+.+|+|+|.+++..... ....++.+||++|||+||+++||+|+|+|+|+|++++||||||+.+. +.+||
T Consensus 20 ~~p~~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG 95 (299)
T 3t9w_A 20 HMPVRAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDG 95 (299)
T ss_dssp -------CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSC
T ss_pred CCCcccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCC
Confidence 345567889999999988754221 33445667999999999999999999999999999999999999765 57999
Q ss_pred CcccCCCCCCCCeEEEEEEEC------------CCceeeeEecchh------hhhhcceeeEEEEeCCCCCCCCCCCCCC
Q 009149 99 VYGTTCPIPPGKNFTYILQVK------------DQIGSFYYFPSLA------FHKAAGGFGGIRILSRPRIPVPFPDPAG 160 (542)
Q Consensus 99 v~~~q~~i~pG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~ 160 (542)
++..||+|+||++|+|+|+++ .++||||||||.. .|+.+||+|+|||+++... .+ |+
T Consensus 96 ~~~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~--~~---d~ 170 (299)
T 3t9w_A 96 TLMNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL--LP---KR 170 (299)
T ss_dssp CTTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--CC---SE
T ss_pred CccccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc--Cc---cc
Confidence 985599999999999999864 2589999999963 4889999999999986421 22 55
Q ss_pred CeEEEEEeeeccchhhHHHhhccCCCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeec
Q 009149 161 DYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVE 240 (542)
Q Consensus 161 e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~D 240 (542)
|+++++++|. +||+.
T Consensus 171 e~~l~~~~~~------------------------~Ng~~----------------------------------------- 185 (299)
T 3t9w_A 171 QFTVVFNDMM------------------------INNRA----------------------------------------- 185 (299)
T ss_dssp EEEEEEETTE------------------------ETTCC-----------------------------------------
T ss_pred cceeeeeeee------------------------ecCcc-----------------------------------------
Confidence 6555543221 11110
Q ss_pred CcccceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeeeecCCccceEEEEEecCCCCCCCCCCCCCCccccccccccc
Q 009149 241 GTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQA 320 (542)
Q Consensus 241 G~~~~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~ 320 (542)
T Consensus 186 -------------------------------------------------------------------------------- 185 (299)
T 3t9w_A 186 -------------------------------------------------------------------------------- 185 (299)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCC
Q 009149 321 RSIRSNLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDN 400 (542)
Q Consensus 321 ~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~ 400 (542)
+. +.
T Consensus 186 ----------------------------------------------------~~--~~---------------------- 189 (299)
T 3t9w_A 186 ----------------------------------------------------HH--DA---------------------- 189 (299)
T ss_dssp ----------------------------------------------------TT--CC----------------------
T ss_pred ----------------------------------------------------cc--cc----------------------
Confidence 00 00
Q ss_pred CCCCCccccceEEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEE
Q 009149 401 PTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSA 480 (542)
Q Consensus 401 p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~ 480 (542)
..+.++.|++|+|+|.|.+...||||||||.|+|+..+.... ....+.++||+.|.|++...
T Consensus 190 ----------p~l~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~~~g~~~~--------~~~~~~~~Dtv~v~PGe~~~ 251 (299)
T 3t9w_A 190 ----------PTFEANLGERVEWIAIGHGSNFHTFHLHGHRWLDNRTGMRTS--------EYDPSPLIDIKDLNPGVSFG 251 (299)
T ss_dssp ----------CEEEEETTCEEEEEEEEESSCCCEEEETTCCEESSSSSSCCS--------TTCCCCEESEEECCTTCEEE
T ss_pred ----------ccceecCCCEEEEEEEeccccceeeeEecceEEEEecccccC--------CcCCCCceeeEEeCCceeEE
Confidence 002356678899999999989999999999999988765322 22345689999999998766
Q ss_pred EEE---EecCceeeEEEeechhhhhcceEEEEEEecCCc
Q 009149 481 IYI---ALDNVGMWNLRSESWARQYLGQQFYLRVYTAST 516 (542)
Q Consensus 481 irf---~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 516 (542)
+++ +++|||.|+||||+++|++.|||..|+|.+.+.
T Consensus 252 ~~via~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 252 FQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp EEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEEEEeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 554 568999999999999999999999999987654
No 27
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=1.7e-47 Score=381.99 Aligned_cols=232 Identities=19% Similarity=0.249 Sum_probs=204.3
Q ss_pred CeEEEEEEEEEEEecC-CCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCccc-CC
Q 009149 27 PYRFFNWNVTYGDIYP-LGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGT-TC 104 (542)
Q Consensus 27 ~~~~~~l~i~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~ 104 (542)
.+++|+|++++..+.+ +|..+.+|+|||++|||+||+++||+|+|+++|.++++++|||||++ ..++||+|++ ||
T Consensus 33 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~~ 109 (288)
T 3gdc_A 33 TLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIGAG 109 (288)
T ss_dssp EEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTSTTC
T ss_pred cEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCccce
Confidence 4688999999998875 59999999999999999999999999999999999999999999996 3579999998 99
Q ss_pred CCCCCCeEEEEEEECCCceeeeEecchh---hhhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchhhHHHhh
Q 009149 105 PIPPGKNFTYILQVKDQIGSFYYFPSLA---FHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLRAHL 181 (542)
Q Consensus 105 ~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 181 (542)
+|+||++++|+|++ +++||||||||.. .|+.+||+|+|||+++... .+ .++|++|+++||+.++
T Consensus 110 ~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~-~~---~d~e~~l~~~d~~~~~-------- 176 (288)
T 3gdc_A 110 SIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR-PP---ADDEMVMVMNGYNTDG-------- 176 (288)
T ss_dssp SBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC-CC---CSEEEEEEEEEECCSS--------
T ss_pred eECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC-CC---CcceEEEEEeeEecCC--------
Confidence 99999999999996 7899999999986 7999999999999986543 22 3789999999998752
Q ss_pred ccCCCCCCCCeEEEcCCCCC---ceEEEecCcEEEEEEEEcCCCc-eEEEEEecceeEEEeecCcccceeeeeeEEEcCC
Q 009149 182 DKGKKLPLPDGILINGRGSG---AAFNVEQGKTYRLRISNVGLQN-SLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVG 257 (542)
Q Consensus 182 ~~~~~~~~~~~~liNG~~~~---~~~~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pg 257 (542)
...++.++|||+... +.++++.|++|||||+|++... .+.|||+||.|+|++.++....+..+|++.|.||
T Consensus 177 -----g~~~~~~~iNG~~~~~~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~Dtv~v~pg 251 (288)
T 3gdc_A 177 -----GDDNEFYSVNGLPFHFMDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQG 251 (288)
T ss_dssp -----TTCCSEEEETTSTTHHHHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEEESEEEEETT
T ss_pred -----CCCcceEEECcccccccCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCceeeEEEeCCC
Confidence 124679999999752 3699999999999999999654 7899999999999984443345688999999999
Q ss_pred ceEEEEEEeCCCCcceEEEEeee
Q 009149 258 QSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 258 eR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
||++|+++++ .+|.|.++|+..
T Consensus 252 ~~~~v~~~~~-~pG~~~~hCH~~ 273 (288)
T 3gdc_A 252 QRGILELRFP-YPGKFMFHAHKT 273 (288)
T ss_dssp CEEEEEECCC-SCEEEEEECSSH
T ss_pred ceEEEEEECC-CCEEEEEEecCh
Confidence 9999999998 799999999854
No 28
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=4e-47 Score=387.67 Aligned_cols=242 Identities=18% Similarity=0.186 Sum_probs=191.3
Q ss_pred CCCeEEEEEEEEEEEecCCCeeeE-EEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccC
Q 009149 25 EDPYRFFNWNVTYGDIYPLGVRQR-GILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTT 103 (542)
Q Consensus 25 ~~~~~~~~l~i~~~~~~~~G~~~~-~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q 103 (542)
...+++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+.+. .++||++..|
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~ 119 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 119 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCccccc
Confidence 45779999999875 2443221 2234899999999999999999999999999999999999876 5799999339
Q ss_pred CCCCCCCeEEEEEEECC------------CceeeeEecch------hhhhhcceeeEEEEeCCCCCCCCCCCCCCCeEEE
Q 009149 104 CPIPPGKNFTYILQVKD------------QIGSFYYFPSL------AFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVL 165 (542)
Q Consensus 104 ~~i~pG~~~~Y~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~ 165 (542)
|+|.||++++|+|++.. ++|+||||||. ..|+.+||+|+|||+++... . .|+|++++
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~--~---pd~e~~l~ 194 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--L---PDATHTIV 194 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--C---CSEEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC--C---CCceEEEE
Confidence 99999999999999732 35999999996 37999999999999986432 2 25666666
Q ss_pred EEeeeccchhhHHHhhccCCCCCCCCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccc
Q 009149 166 IGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTL 245 (542)
Q Consensus 166 l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~ 245 (542)
++|| +|||+.
T Consensus 195 ~~d~------------------------~iNG~~---------------------------------------------- 204 (343)
T 3cg8_A 195 FNDM------------------------TINNRK---------------------------------------------- 204 (343)
T ss_dssp EETT------------------------EETTCC----------------------------------------------
T ss_pred cccc------------------------eecccC----------------------------------------------
Confidence 6543 345443
Q ss_pred eeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeeeecCCccceEEEEEecCCCCCCCCCCCCCCcccccccccccccccc
Q 009149 246 QTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRS 325 (542)
Q Consensus 246 p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~ 325 (542)
+ +
T Consensus 205 ------------------------------------------------~--------------~---------------- 206 (343)
T 3cg8_A 205 ------------------------------------------------P--------------H---------------- 206 (343)
T ss_dssp ------------------------------------------------T--------------T----------------
T ss_pred ------------------------------------------------C--------------C----------------
Confidence 0 0
Q ss_pred CCCCCCCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCC
Q 009149 326 NLTASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGG 405 (542)
Q Consensus 326 ~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~ 405 (542)
..|
T Consensus 207 ---------------------------------------------------~~~-------------------------- 209 (343)
T 3cg8_A 207 ---------------------------------------------------TGP-------------------------- 209 (343)
T ss_dssp ---------------------------------------------------CCC--------------------------
T ss_pred ---------------------------------------------------CCc--------------------------
Confidence 000
Q ss_pred ccccceEEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEe
Q 009149 406 IYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIAL 485 (542)
Q Consensus 406 ~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~a 485 (542)
.+.++.|++|+|+|.|.+.+.||||||||.|+|+.. |.+.. ....+.|+||+.|+|++++.++|++
T Consensus 210 ------~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 210 ------DFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp ------CEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEET
T ss_pred ------cEEeCCCCEEEEEEEcCCccccccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEEE
Confidence 034677889999999998899999999999999743 32221 1123578999999999999999995
Q ss_pred ---cCceeeEEEeechhhhhcceEEEEEEecCC
Q 009149 486 ---DNVGMWNLRSESWARQYLGQQFYLRVYTAS 515 (542)
Q Consensus 486 ---dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 515 (542)
+|||.|+||||+++|++.|||..|.|.+++
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 308 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCC
Confidence 899999999999999999999999998654
No 29
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2e-47 Score=441.38 Aligned_cols=387 Identities=12% Similarity=0.095 Sum_probs=261.1
Q ss_pred eeeEEEEEcCCCcc--ceEEEecCCEEEEEEEeCCCCCceEEeccccCCC-CCCCCCCcccCCCCCCCCeEEEEEEECCC
Q 009149 45 VRQRGILINWQFPG--PDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRR-NSFEDGVYGTTCPIPPGKNFTYILQVKDQ 121 (542)
Q Consensus 45 ~~~~~~~~Ng~~pg--P~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~-~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~ 121 (542)
..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||+++.+ +.++||++.+.|+|.||.+++|+|++ ++
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~pg~~~t~~~~~-~~ 691 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDTANLFPQTSLTLHMWP-DT 691 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESEEEECTTCEEEEEECC-CS
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecceEeecCCceEEEEEec-CC
Confidence 46789999999999 889999999999999976 5569999999998 88999998767999999999999995 79
Q ss_pred ceeeeEecchhhhhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEE----EeeeccchhhHHHhh-c-cCCC---------
Q 009149 122 IGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLI----GDWYKSNHTDLRAHL-D-KGKK--------- 186 (542)
Q Consensus 122 ~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l----~d~~~~~~~~~~~~~-~-~~~~--------- 186 (542)
+||||||||.+.|+.+||.|.++|++......+..+++.|.++.| .||++.....+...+ . .+..
T Consensus 692 ~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~p~~~~~n~~ 771 (1065)
T 2j5w_A 692 EGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQNVSNAFLDKG 771 (1065)
T ss_dssp CEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCCCCCTTTCCT
T ss_pred CeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccCccceeecCC
Confidence 999999999999999999999999986443333224577889999 899998655432211 0 0000
Q ss_pred -CCCCC------eEEEc-----C-----------CCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcc
Q 009149 187 -LPLPD------GILIN-----G-----------RGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTH 243 (542)
Q Consensus 187 -~~~~~------~~liN-----G-----------~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~ 243 (542)
...+. ++-+. . ....|.|++++|+++++||.|... ..+.++.+| +.+...+
T Consensus 772 ~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HG--l~~~~~~--- 845 (1065)
T 2j5w_A 772 EFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHG--VQTESST--- 845 (1065)
T ss_dssp TTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESS--CBCSCSC---
T ss_pred CccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeecc--ccccCCC---
Confidence 00011 11111 1 112388999999999999999976 455666665 4443321
Q ss_pred cceeeeeeEEEcCCceEEEEEEeCCC---------CcceEEEEeeeecCCc-cceEEEEEecCCCCCCCCCCCCCCcccc
Q 009149 244 TLQTTYSSLDVHVGQSYSVLVTADQP---------ARDYYIVVSSRFTSTV-LTTTGILHYSNSAGPVSGPIPGGPTVQI 313 (542)
Q Consensus 244 ~~p~~~~~l~l~pgeR~dv~v~~~~~---------~g~y~i~~~~~~~~~~-~~~~ail~y~~~~~~~~~~~p~~p~~~~ 313 (542)
...+.||++++..+...+. +|.||++++.....+. ....+.|.+....... +..+..+.
T Consensus 846 -------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l~----~~~~~~d~ 914 (1065)
T 2j5w_A 846 -------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLK----VFNPRRKL 914 (1065)
T ss_dssp -------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC---------CCCCEE
T ss_pred -------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCccccc----ccCCCcce
Confidence 1256899998888877642 2589999874321111 1223333333221100 00011122
Q ss_pred cccccc--cc-ccccCCCCC--CCCCCCCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhccccc
Q 009149 314 DWSLNQ--AR-SIRSNLTAS--GPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKI 388 (542)
Q Consensus 314 ~~~~~~--~~-~l~~~l~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~ 388 (542)
++.+.. .. ...+-+... ...+.|.. + +.... .+. .....|.|||+.|.. .
T Consensus 915 D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~-v-----~~~~~-~~~------~~~~~~~iNG~~~~~--~---------- 969 (1065)
T 2j5w_A 915 EFALLFLVFDENESWYLDDNIKTYSDHPEK-V-----NKDDE-EFI------ESNKMHAINGRMFGN--L---------- 969 (1065)
T ss_dssp EEEEEEEEEEGGGSTTHHHHHHHHCSCGGG-C-----CTTCH-HHH------HHTEEEEETTBCTTC--C----------
T ss_pred EEEEEEEeecCCcceeeccCcccccCCccc-c-----Ccchh-hhh------ccCceEEECCccCCC--C----------
Confidence 211100 00 000000000 00000100 0 00000 000 112358999987642 1
Q ss_pred CcceecCCCCCCCCCCCccccceEEeccCCcEEEEEEEcCC--CCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCC
Q 009149 389 GGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDE--DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAV 466 (542)
Q Consensus 389 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~ 466 (542)
..+.++.|++|+|+|.|.+ .+.||||||||.|+|++++ |.
T Consensus 970 ----------------------~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------------p~ 1011 (1065)
T 2j5w_A 970 ----------------------QGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VY 1011 (1065)
T ss_dssp ----------------------CCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CE
T ss_pred ----------------------ccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC----------------Cc
Confidence 1246899999999999985 5789999999999999763 57
Q ss_pred cceEEEeCCCCEEEEEEEecCceeeEEEeechhhhhcceEEEEEEecCC
Q 009149 467 ARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTAS 515 (542)
Q Consensus 467 ~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 515 (542)
||||+.|+|+++++|+|++||||.|+||||+++|++.|||..|+|.+.+
T Consensus 1012 ~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1012 SSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp EESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred eeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 9999999999999999999999999999999999999999999997654
No 30
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=1.2e-45 Score=391.48 Aligned_cols=267 Identities=18% Similarity=0.205 Sum_probs=222.7
Q ss_pred eeecCCCeEEEEEEEEEEEec-CCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCC--CCceEEeccccCCCCCCCC
Q 009149 21 IVSAEDPYRFFNWNVTYGDIY-PLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLD--EPFLLSWNGIQNRRNSFED 97 (542)
Q Consensus 21 ~~~~~~~~~~~~l~i~~~~~~-~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~--~~~~iH~HG~~~~~~~~~D 97 (542)
...+.+.+++|+|++++..+. .+|..+.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+.+ +|
T Consensus 21 ~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~d 95 (442)
T 2zoo_A 21 INRDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PG 95 (442)
T ss_dssp CCCSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GG
T ss_pred cccCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CC
Confidence 445677889999999999998 5899999999999999999999999999999999985 499999999853 68
Q ss_pred CCcccCCCCCCCCeEEEEEEECCCceeeeEecc---hhhhhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccch
Q 009149 98 GVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPS---LAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNH 174 (542)
Q Consensus 98 Gv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H---~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~ 174 (542)
|++.+ .+|.||++++|+|++ +++|||||||| ...|+.+||+|+|||+++... . .+++|++|+++||++...
T Consensus 96 G~~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~-~---~~d~e~~l~l~d~~~~~~ 169 (442)
T 2zoo_A 96 GGAES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL-A---PVDREYYLVQGDFYTKGE 169 (442)
T ss_dssp GGGGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC-C---CCSEEEEEEEEEECBSSC
T ss_pred CCCcc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC-C---CCCceEEEEeeeeeccCc
Confidence 87653 369999999999995 78999999997 458999999999999986432 1 338899999999998753
Q ss_pred h-hHH-Hhhc-cCCCCCCCCeEEEcCCCCC----ceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCccccee
Q 009149 175 T-DLR-AHLD-KGKKLPLPDGILINGRGSG----AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQT 247 (542)
Q Consensus 175 ~-~~~-~~~~-~~~~~~~~~~~liNG~~~~----~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~ 247 (542)
. ... ...+ .......+++++|||+... +.+++++|++|||||+|+|....+.|+|+||+|+||+.||.+++|.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~ 249 (442)
T 2zoo_A 170 FGEAGLQPFDMAKAIDEDADYVVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNH 249 (442)
T ss_dssp TTCCEEECBCHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEEC
T ss_pred ccccccccCChhHhccCCCCEEEECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccCCCc
Confidence 1 000 0000 0011246799999999852 5799999999999999999989999999999999999999999999
Q ss_pred eeeeEEEcCCceEEEEEEeCCCCcceEEEEeeeecCCccceEEEEEecCCCC
Q 009149 248 TYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAG 299 (542)
Q Consensus 248 ~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~ 299 (542)
.++++.|.||||+||+|+++ .+|.|+++|+...........++++|.+...
T Consensus 250 ~~~~~~l~pg~r~~v~v~~~-~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 250 NVQTTLIPAGGAAIVEFKVE-VPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp SBSEEEECTTEEEEEEEECC-SCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred cceEEEECCCeeEEEEEEcC-CCCeEEEEecccccccccCceEEEEecCCCC
Confidence 99999999999999999999 5899999998653322345689999987653
No 31
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=2.3e-45 Score=374.75 Aligned_cols=268 Identities=16% Similarity=0.149 Sum_probs=210.4
Q ss_pred eecCCCeEEEEEEEEEEEecC-CCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCc
Q 009149 22 VSAEDPYRFFNWNVTYGDIYP-LGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVY 100 (542)
Q Consensus 22 ~~~~~~~~~~~l~i~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 100 (542)
..+.+.+++|+|++++..+.+ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++++....||.+
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 26 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGG
T ss_pred cCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCC
Confidence 455678999999999999876 6999999999999999999999999999999999 589999999887654455555
Q ss_pred ccCCCCCCCCeEEEEEEECCCceeeeEecchh-----hhhhcceeeEEEEeCCCCCC----CCCCCCCCCeEEEEEeeec
Q 009149 101 GTTCPIPPGKNFTYILQVKDQIGSFYYFPSLA-----FHKAAGGFGGIRILSRPRIP----VPFPDPAGDYTVLIGDWYK 171 (542)
Q Consensus 101 ~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~ 171 (542)
.+ ..|.||++++|+|++ +++||||||||.. .|+.+||+|+|||+++...+ .++ .+|+|++|+++||++
T Consensus 103 ~~-~~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 179 (333)
T 1mzy_A 103 GL-TLINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHYI 179 (333)
T ss_dssp GG-CCBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECC
T ss_pred ce-eEeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeecc
Confidence 55 239999999999996 6899999999986 69999999999999764321 122 348899999999998
Q ss_pred cc--hhhHH----------HhhccCCCCCCCCeEEEcCCCC----CceEEEecCcEEEEEEEEcCCCceEEEEEecceeE
Q 009149 172 SN--HTDLR----------AHLDKGKKLPLPDGILINGRGS----GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMK 235 (542)
Q Consensus 172 ~~--~~~~~----------~~~~~~~~~~~~~~~liNG~~~----~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~ 235 (542)
.. +..+. ..++. .....++.++|||+.. .+.++|++|++||||++|++....+ ..+++|.|+
T Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~~h~~~ 257 (333)
T 1mzy_A 180 PKDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRP-HLIGGHGDL 257 (333)
T ss_dssp CBCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCE-EEETCCEEE
T ss_pred CccccccccccccccccccchhHH-hhccCCcEEEECCcccccCCCcceEecCCCEEEEEECCCCCcccc-EEECCCCeE
Confidence 32 22111 00000 1125678999999973 2569999999988877666543333 347899999
Q ss_pred EEeecCcccce-e-eeeeEEEcCCceEEEEEEeCCCCcceEEEEeeeecCCccceEEEEEecCCCC
Q 009149 236 LVEVEGTHTLQ-T-TYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAG 299 (542)
Q Consensus 236 via~DG~~~~p-~-~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~ 299 (542)
||+ ||.++++ . .++++.|.||||+||+|+++ .+|.|+++|+...........++++|.+...
T Consensus 258 Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~-~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 258 VWE-TGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp EET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred EEe-CCcccCCCccCcceEEECCCceEEEEEEcC-CCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 999 9999874 3 48999999999999999999 5899999999753321235678999987543
No 32
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=1.6e-44 Score=369.12 Aligned_cols=266 Identities=17% Similarity=0.188 Sum_probs=206.3
Q ss_pred cCCCeEEEEEEEEEEEec--CCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcc
Q 009149 24 AEDPYRFFNWNVTYGDIY--PLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYG 101 (542)
Q Consensus 24 ~~~~~~~~~l~i~~~~~~--~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 101 (542)
+.+.+++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+++|.+. ++||||+++++...+||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcc
Confidence 456789999999998875 5699999999999999999999999999999999973 45666666665556677655
Q ss_pred cCCCCCCCCeEEEEEEECCCceeeeEecchh----hhhhcceeeEEEEeCCCCCC----CCCCCCCCCeEEEEEeeeccc
Q 009149 102 TTCPIPPGKNFTYILQVKDQIGSFYYFPSLA----FHKAAGGFGGIRILSRPRIP----VPFPDPAGDYTVLIGDWYKSN 173 (542)
Q Consensus 102 ~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~~ 173 (542)
+ ..|.||++++|+|++ +++||||||||.. .|+.+||+|+|||+++.... .+. .+|+|++|+++||++..
T Consensus 105 ~-~~i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 105 L-TNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp G-CCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCCB
T ss_pred e-EEeCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeeecc
Confidence 5 239999999999996 6899999999974 79999999999999864321 122 34889999999999852
Q ss_pred --hhhHHHhhcc---------CCCCCCCCeEEEcCCCC----CceEEEecCcEEEEEEEEcCCCceEEEE-EecceeEEE
Q 009149 174 --HTDLRAHLDK---------GKKLPLPDGILINGRGS----GAAFNVEQGKTYRLRISNVGLQNSLNFR-IQNHKMKLV 237 (542)
Q Consensus 174 --~~~~~~~~~~---------~~~~~~~~~~liNG~~~----~~~~~v~~G~~~rlRliNa~~~~~~~~~-i~gh~~~vi 237 (542)
.+++..+... ......++.++|||+.. .+.++|++|++||| +|++..+.+.|+ |++|.|+|+
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~l~v~~GervRl--in~~~~~~~~~~~i~gh~~~Vi 259 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALTGANALTAKVGETVLL--IHSQANRDTRPHLIGGHGDWVW 259 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEE--EEEESSSCBCEEETTCCEEEEE
T ss_pred ccCCceeecccccccccchhhHhhcCCCCEEEECCeeccCCCCcceEcCCCCEEEE--EecCCCCccceEEECCcCceEe
Confidence 1111100000 00124678999999984 27899999997765 666666655544 699999999
Q ss_pred eecCccccee--eeeeEEEcCCceEEEEEEeCCCCcceEEEEeeeecCCccceEEEEEecCCCC
Q 009149 238 EVEGTHTLQT--TYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAG 299 (542)
Q Consensus 238 a~DG~~~~p~--~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~ 299 (542)
+ ||.+++|. .++++.|+||||+||+|+++ .+|.|+++|+...........|+++|.+...
T Consensus 260 ~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~-~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 260 E-TGKFANPPQRDLETWFIRGGSAGAALYTFK-QPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp T-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred C-CCcCcCCccccceEEEECCCCcEEEEEEcC-CCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 8 99999764 36899999999999999999 5899999998653221245678999987654
No 33
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=1.3e-44 Score=370.48 Aligned_cols=267 Identities=16% Similarity=0.171 Sum_probs=206.3
Q ss_pred ecCCCeEEEEEEEEEEEec--CCCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCc
Q 009149 23 SAEDPYRFFNWNVTYGDIY--PLGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVY 100 (542)
Q Consensus 23 ~~~~~~~~~~l~i~~~~~~--~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 100 (542)
.+.+.+++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++++....||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 4567889999999999987 459999999999999999999999999999999998 77999999887654444443
Q ss_pred ccCCCCCCCCeEEEEEEECCCceeeeEecchh----hhhhcceeeEEEEeCCCCCC----CCCCCCCCCeEEEEEeeecc
Q 009149 101 GTTCPIPPGKNFTYILQVKDQIGSFYYFPSLA----FHKAAGGFGGIRILSRPRIP----VPFPDPAGDYTVLIGDWYKS 172 (542)
Q Consensus 101 ~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~ 172 (542)
.+ ..|.||++++|+|++ +++||||||||.. .|+.+||+|+|||+++.... .+. .+++|++|+++||++.
T Consensus 110 ~~-~~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~ 186 (340)
T 2bw4_A 110 AL-TQVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVP 186 (340)
T ss_dssp GG-CCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCC
T ss_pred cc-eEeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeec
Confidence 33 349999999999996 6799999999975 79999999999999864211 122 3478999999999983
Q ss_pred --chhhHH----------HhhccCCCCCCCCeEEEcCCCC----CceEEEecCcEEEEEEEEcCCCceEEEEEecceeEE
Q 009149 173 --NHTDLR----------AHLDKGKKLPLPDGILINGRGS----GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKL 236 (542)
Q Consensus 173 --~~~~~~----------~~~~~~~~~~~~~~~liNG~~~----~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~v 236 (542)
.++.+. ...+ ......++.++|||+.. .+.++|++|+++||++.|++.... ..++++|.|+|
T Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~-~~~i~gh~~~V 264 (340)
T 2bw4_A 187 KDEAGNYKKYETPGEAYEDAVK-AMRTLTPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTR-PHLIGGHGDYV 264 (340)
T ss_dssp BCTTSCBCCCCSHHHHHHHHHH-HHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBC-EEEETCCEEEE
T ss_pred cccCCcccccccccccccchhh-HhhcCCCCEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccc-eEEecCcceEE
Confidence 222211 0000 00124678999999984 378999999988766665544322 33489999999
Q ss_pred EeecCcccce-e-eeeeEEEcCCceEEEEEEeCCCCcceEEEEeeeecCCccceEEEEEecCCCC
Q 009149 237 VEVEGTHTLQ-T-TYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSAG 299 (542)
Q Consensus 237 ia~DG~~~~p-~-~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~ 299 (542)
++ ||.++.+ . .++++.|.||||+||+|+++ .+|.|+++|+...........++++|.+...
T Consensus 265 i~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~-~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 265 WA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFR-QPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp ET-TCCTTSCCEEEESCCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred eC-CCcccCCccccceEEEeCCCceEEEEEECC-CCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 97 9998864 3 58999999999999999999 4899999998753221234568899987543
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=4.2e-40 Score=364.25 Aligned_cols=248 Identities=13% Similarity=0.167 Sum_probs=184.7
Q ss_pred CCCeEEEEEEEEEEEec--CCC------------eeeE--EEEE----------------cCCCccceEEEecCCEEEEE
Q 009149 25 EDPYRFFNWNVTYGDIY--PLG------------VRQR--GILI----------------NWQFPGPDIHSVTNDNLIIN 72 (542)
Q Consensus 25 ~~~~~~~~l~i~~~~~~--~~G------------~~~~--~~~~----------------Ng~~pgP~i~v~~Gd~v~i~ 72 (542)
...+|+|-+-+.+..+. +.| +.++ ...| ++++|||+|||++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 36788999999888874 222 1112 2334 34789999999999999999
Q ss_pred EEeCCCCCceEEeccccCCCCCCCCCCccc---------CCCCCCCCeEEEEEEECCC-----ce----eeeEecchh--
Q 009149 73 VFNSLDEPFLLSWNGIQNRRNSFEDGVYGT---------TCPIPPGKNFTYILQVKDQ-----IG----SFYYFPSLA-- 132 (542)
Q Consensus 73 v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~---------q~~i~pG~~~~Y~f~~~~~-----~G----t~wYH~H~~-- 132 (542)
|+|.|+++++|||||+++. +.+||+|++ ||+|+||++|+|+|+++++ +| |||||||.+
T Consensus 83 ~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 9999999999999999875 579999863 8999999999999998654 57 999999985
Q ss_pred hhhhcceeeEEEEeCCCCCCC--CCCCCCCCeEEEEE------eeeccchhhHHHhhccCCCCCCCCeEEEcCCCC-Cce
Q 009149 133 FHKAAGGFGGIRILSRPRIPV--PFPDPAGDYTVLIG------DWYKSNHTDLRAHLDKGKKLPLPDGILINGRGS-GAA 203 (542)
Q Consensus 133 ~q~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~------d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~-~~~ 203 (542)
.|+.+||+|+|||+++..... ..+..++|++|+|+ ||+++.................++.++|||+.. .|.
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~p~ 240 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIYNLPG 240 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC---------------CCCEEEEETTBSSCCCC
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCcchhhcCceeccCCEecCCCC
Confidence 799999999999999754211 11223689999999 566654321100000111234578999999973 478
Q ss_pred EEEecCcEEEEEEEEcCCCc-eEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009149 204 FNVEQGKTYRLRISNVGLQN-SLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 204 ~~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
++|++|++|||||+|++... .+.||+|||.|+|++.|| ..++++.|.||||+||+|+++ .+|.|.++|+..
T Consensus 241 l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~-~pG~w~~hch~~ 312 (647)
T 1sdd_B 241 LRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKAS-KPGWWLLDTEVG 312 (647)
T ss_dssp CEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECC-SSEEEEEECCCH
T ss_pred eEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEec-cceEeecccCcc
Confidence 99999999999999999865 899999999999999986 478999999999999999998 589999999864
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=6.8e-39 Score=340.34 Aligned_cols=255 Identities=16% Similarity=0.167 Sum_probs=209.5
Q ss_pred CCeEEEEEEEEEEEecC-CCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCC--CCceEEeccccCCCCCCCCCCccc
Q 009149 26 DPYRFFNWNVTYGDIYP-LGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLD--EPFLLSWNGIQNRRNSFEDGVYGT 102 (542)
Q Consensus 26 ~~~~~~~l~i~~~~~~~-~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~--~~~~iH~HG~~~~~~~~~DGv~~~ 102 (542)
...+.++|++++....+ +|....+|+|||++|||+|++++||+++|+++|.+. ..++|||||+. .+||++.+
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCcc
Confidence 45668888887766665 688899999999999999999999999999999985 57899999974 37998865
Q ss_pred CCCCCCCCeEEEEEEECCCceeeeEecchh---hhhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchh----
Q 009149 103 TCPIPPGKNFTYILQVKDQIGSFYYFPSLA---FHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHT---- 175 (542)
Q Consensus 103 q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~---- 175 (542)
..|.||++++|.|++ +++|+||||||.. .|+.+||+|+|+|+++.. .| ..++|++++++||++....
T Consensus 236 -~~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~--~P--~~d~~~~~~~~~~~~~~~~~~~g 309 (447)
T 2dv6_A 236 -TQTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG--LP--QVDREFYVMQGEIYTVKSFGTSG 309 (447)
T ss_dssp -CCBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC--SC--CCSEEEEEEEEEECBSSCTTCCE
T ss_pred -EEeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC--CC--CCCeeEEEEecccccCCcccccc
Confidence 239999999999996 6799999999964 789999999999998642 22 3478889999999875321
Q ss_pred ----hHHHhhccCCCCCCCCeEEEcCCCCC----ceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCccccee
Q 009149 176 ----DLRAHLDKGKKLPLPDGILINGRGSG----AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQT 247 (542)
Q Consensus 176 ----~~~~~~~~~~~~~~~~~~liNG~~~~----~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~ 247 (542)
...... ...++.++|||+... ..+++++|++|||||+|++....+.|||+||.|+||+.||.++++.
T Consensus 310 ~~~~~~~~~~-----~~~~~~~~iNG~~~~~~~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~p 384 (447)
T 2dv6_A 310 EQEMDYEKLI-----NEKPEYFLFNGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPP 384 (447)
T ss_dssp ECCBBHHHHH-----TTCCSEEEETTSTTCCCCCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSCC
T ss_pred cccCChHHhh-----ccCCCEEEECCcccCCCCCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCCC
Confidence 011111 134689999999852 3799999999999999999888999999999999999999998754
Q ss_pred --eeeeEEEcCCceEEEEEEeCCCCcceEEEEeeeecCCccceEEEEEecCCC
Q 009149 248 --TYSSLDVHVGQSYSVLVTADQPARDYYIVVSSRFTSTVLTTTGILHYSNSA 298 (542)
Q Consensus 248 --~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~ 298 (542)
.+|++.|.||||++|+|+++ .+|.|+|+|+.... ......++++|.+..
T Consensus 385 ~~~~dtv~l~pg~r~~i~~~~~-~pG~~~~hch~~~h-~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 385 LIGVQTVSVPPGGATIVDFKID-RAGRYILVDHALSR-LEHGLVGFLNVDGPK 435 (447)
T ss_dssp EEEESEEEECTTEEEEEEEECC-SCEEEEEEESSGGG-GGGTCCEEEEECSCS
T ss_pred cccccEEEECCCcEEEEEEECC-CCEEEEEEecCcCc-cccCCEEEEEEeCCC
Confidence 58999999999999999999 69999999986532 123357899998754
No 36
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.5e-41 Score=341.90 Aligned_cols=212 Identities=12% Similarity=0.165 Sum_probs=158.1
Q ss_pred EEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCC----CCCCCCCCccc---CCCCCCCCeEEEEEEECC
Q 009149 48 RGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNR----RNSFEDGVYGT---TCPIPPGKNFTYILQVKD 120 (542)
Q Consensus 48 ~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~----~~~~~DGv~~~---q~~i~pG~~~~Y~f~~~~ 120 (542)
...++| ++|||+|+|++||+|+|+|+|.++++++|||||++.. +.+++||++++ ||+|+||++|+|+|++++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~ 128 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISE 128 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCG
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCC
Confidence 345678 6899999999999999999999999999999999843 33334444332 699999999999999754
Q ss_pred C---------ceeeeEecchhh--hhhcceeeEEEEeCCCCC---CCCCCCCCCCeEEEEEeeeccchhhHHHhhccCCC
Q 009149 121 Q---------IGSFYYFPSLAF--HKAAGGFGGIRILSRPRI---PVPFPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKK 186 (542)
Q Consensus 121 ~---------~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~ 186 (542)
+ +||||||||... |+.+||+|+|||+++... ..+. ..++|++++++||..... ..
T Consensus 129 ~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~----------~~ 197 (306)
T 1sdd_A 129 HSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKS----------WN 197 (306)
T ss_dssp GGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSS----------SS
T ss_pred ccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccccc----------cc
Confidence 3 379999999774 889999999999986421 1122 347899999999842210 01
Q ss_pred CCCCCeEEEcCCCC--CceEEEecCcEEEEEEEEcCCC-ceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEE
Q 009149 187 LPLPDGILINGRGS--GAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVL 263 (542)
Q Consensus 187 ~~~~~~~liNG~~~--~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~ 263 (542)
...++.++|||+.. .|.+++++|+++||||+|+|.. ..+.||++||.|.+ || ..+|++.|.||||+||+
T Consensus 198 ~~~~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~pger~~v~ 269 (306)
T 1sdd_A 198 QTSSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLVSATSTTAN 269 (306)
T ss_dssp CCCCEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEETTCCBC--
T ss_pred cCCCcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEECCCcEEEEE
Confidence 13467899999984 3789999999999999999987 57889999999975 87 35899999999999999
Q ss_pred EEeCCCCcceEEEEeee
Q 009149 264 VTADQPARDYYIVVSSR 280 (542)
Q Consensus 264 v~~~~~~g~y~i~~~~~ 280 (542)
|+++ .+|.|+++|+..
T Consensus 270 ~~~~-~pG~~~~hch~~ 285 (306)
T 1sdd_A 270 MTVS-PEGRWTIASLIP 285 (306)
T ss_dssp -------CCCCCBCCST
T ss_pred EEcC-CCeEEEEEeCCh
Confidence 9998 689999999853
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=5.1e-40 Score=365.80 Aligned_cols=247 Identities=13% Similarity=0.113 Sum_probs=195.1
Q ss_pred CCCeEEEEEEEEEEEe--cCCCe----------------e-eEEEEE-----cC-----------CCccceEEEecCCEE
Q 009149 25 EDPYRFFNWNVTYGDI--YPLGV----------------R-QRGILI-----NW-----------QFPGPDIHSVTNDNL 69 (542)
Q Consensus 25 ~~~~~~~~l~i~~~~~--~~~G~----------------~-~~~~~~-----Ng-----------~~pgP~i~v~~Gd~v 69 (542)
...+|+|.|.+++..+ .++|. + ...+.| ++ ++|||+||+++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 5678999999999886 45542 1 223333 33 589999999999999
Q ss_pred EEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECC---------CceeeeEecchhh--hhhcc
Q 009149 70 IINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKD---------QIGSFYYFPSLAF--HKAAG 138 (542)
Q Consensus 70 ~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~G 138 (542)
+|+|+|.++++++|||||+++..... ||+++.||+|+||++|+|+|++++ ++||||||||.+. |+.+|
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~G 288 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSG 288 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTS
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCC
Confidence 99999999999999999999887643 699878999999999999999864 7999999999874 89999
Q ss_pred eeeEEEEeCCCCCCC--CCCCCCCCeEEEEEe------eeccchhhHHHhhc-cC-------CCCCCCCeEEEcCCCC--
Q 009149 139 GFGGIRILSRPRIPV--PFPDPAGDYTVLIGD------WYKSNHTDLRAHLD-KG-------KKLPLPDGILINGRGS-- 200 (542)
Q Consensus 139 l~G~liV~~~~~~~~--~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~-~~-------~~~~~~~~~liNG~~~-- 200 (542)
|+|+|||+++..... .....++|++|++++ |+++.. +..++. +. ......+.++|||+..
T Consensus 289 L~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~--~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~~~ 366 (770)
T 2r7e_B 289 LIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTEN--MERNCRAPCNIQMEDPTFKENYRFHAINGYIMDT 366 (770)
T ss_dssp CCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGG--GSSCSCCSSCCCSSSSSSTTTSCEECTTSCTTTT
T ss_pred ceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccc--hhhcccCccccccCCccccccCCccccCCccCCC
Confidence 999999998753211 111347889888754 444321 111110 00 0011245789999973
Q ss_pred CceEEEecCcEEEEEEEEcCCC-ceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEee
Q 009149 201 GAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSS 279 (542)
Q Consensus 201 ~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~ 279 (542)
.+.+++++|++|||||+|++.. ..+.|||+||.|+|++.||. .+|++.|.||||++|+|+++ .+|.|.|+|+.
T Consensus 367 ~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad-~pG~w~~hcH~ 440 (770)
T 2r7e_B 367 LPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS-KAGIWRVECLI 440 (770)
T ss_dssp CCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS-SCBCCCBCCCS
T ss_pred CCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC-CCCceEEEecc
Confidence 4679999999999999999875 47899999999999999974 78999999999999999998 69999999985
Q ss_pred e
Q 009149 280 R 280 (542)
Q Consensus 280 ~ 280 (542)
.
T Consensus 441 ~ 441 (770)
T 2r7e_B 441 G 441 (770)
T ss_dssp H
T ss_pred c
Confidence 4
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=2.2e-36 Score=336.14 Aligned_cols=215 Identities=18% Similarity=0.177 Sum_probs=167.4
Q ss_pred CCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCC-----CCccc-CCCCCCCCeEEEEEEECCCce-----
Q 009149 55 QFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFED-----GVYGT-TCPIPPGKNFTYILQVKDQIG----- 123 (542)
Q Consensus 55 ~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~D-----Gv~~~-q~~i~pG~~~~Y~f~~~~~~G----- 123 (542)
.+|||+||+++||+|+|+|+|.++++++|||||+.+. .+++| |++.+ ||+|+||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999874 35555 56667 999999999999999876554
Q ss_pred ----eeeEecchh--hhhhcceeeEEEEeCCCCC---CCCCCCCCCCeEEEEEeeeccch----hhHHHhhc-cCCC---
Q 009149 124 ----SFYYFPSLA--FHKAAGGFGGIRILSRPRI---PVPFPDPAGDYTVLIGDWYKSNH----TDLRAHLD-KGKK--- 186 (542)
Q Consensus 124 ----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~---~~~~~~~~~e~~l~l~d~~~~~~----~~~~~~~~-~~~~--- 186 (542)
|||||||.. .|+.+||+|+|||+++... ..+. ..|+|++|++++|..+.+ ..+..+.. ....
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~-~~d~E~~l~~~~fde~~~wy~~~~~~~~~~~p~~v~~~ 605 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQI-MSDKRNVILFSVFDENRSWYLTENIQRFLPNPAGVQLE 605 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSS-CCSCCCEEEECBCCGGGSSCSHHHHHHHSSSSSCSCCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcC-CCCceEEEEeeccccccccccccchhhcccCchhcccc
Confidence 999999987 4789999999999986421 1122 348899999975432111 11111110 0000
Q ss_pred C----CCCCeEEEcCCCC-CceEEEecCcEEEEEEEEcCCC-ceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceE
Q 009149 187 L----PLPDGILINGRGS-GAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSY 260 (542)
Q Consensus 187 ~----~~~~~~liNG~~~-~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~ 260 (542)
. .....++|||+.. ...+.+++|++|||||+|++.. ..+.|||+||.|+|+ +..+|+|.|.||||+
T Consensus 606 ~~~~~~~~~~~~ING~~~~~~~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv~l~Pg~~~ 677 (742)
T 2r7e_A 606 DPEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTLTLFPFSGE 677 (742)
T ss_dssp CHHHHGGGCCBCTTTTCSSCCCCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSSCCCCCSSE
T ss_pred cccccccCceeeecCcCCCCCcEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEEEECCCcEE
Confidence 0 0113478999972 1248999999999999998764 468999999999987 567899999999999
Q ss_pred EEEEEeCCCCcceEEEEeee
Q 009149 261 SVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 261 dv~v~~~~~~g~y~i~~~~~ 280 (542)
+|+|+++ .+|.|+++|+..
T Consensus 678 ~v~~~ad-~pG~w~~hcH~~ 696 (742)
T 2r7e_A 678 TVFMSME-NPGLWILGCHNS 696 (742)
T ss_dssp ECCEECC-CCCCSCCEECCC
T ss_pred EEEEEcC-CCeEEEEEeCCc
Confidence 9999998 699999999865
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.97 E-value=1.3e-30 Score=260.02 Aligned_cols=230 Identities=16% Similarity=0.196 Sum_probs=166.2
Q ss_pred CCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCCC
Q 009149 190 PDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQP 269 (542)
Q Consensus 190 ~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~~ 269 (542)
...+++||+...|.|++++|+++++|+.|.... .+.+|+||.. ..+.||.+. .+...|.|||++++.++++ .
T Consensus 54 ~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~-~ 125 (288)
T 3gdc_A 54 FKGWSYNGRIPGPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDAT-P 125 (288)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECC-S
T ss_pred EEEEEECCccCCCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcC-C
Confidence 468999999877999999999999999999874 5688999975 467899764 2345689999999999997 7
Q ss_pred CcceEEEEeeeec-CC-ccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCCCcccccc
Q 009149 270 ARDYYIVVSSRFT-ST-VLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINT 347 (542)
Q Consensus 270 ~g~y~i~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~~~~~~~~~ 347 (542)
+|.||++|+.... .+ .....+.|.++.... . +..+..+.+ .+..
T Consensus 126 ~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~-----~---~~~d~e~~l--------~~~d------------------ 171 (288)
T 3gdc_A 126 FGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEG-----R---PPADDEMVM--------VMNG------------------ 171 (288)
T ss_dssp CEEEEEECCCSSHHHHHHTTCEEEEEEECSSC-----C---CCCSEEEEE--------EEEE------------------
T ss_pred CccEEEEecCcchHHHHhCcCeEEEEEeCCcc-----C---CCCcceEEE--------EEee------------------
Confidence 9999999986421 11 112334344432211 0 100000000 0000
Q ss_pred ceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEeccCCcEEEEEEEc
Q 009149 348 TKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQN 427 (542)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N 427 (542)
+.... ......|+|||+.|.... ..+.++.|++|+|.|.|
T Consensus 172 -----~~~~~--g~~~~~~~iNG~~~~~~~---------------------------------~~l~v~~Ge~vr~~l~N 211 (288)
T 3gdc_A 172 -----YNTDG--GDDNEFYSVNGLPFHFMD---------------------------------FPVKVKQHELVRIHLIN 211 (288)
T ss_dssp -----ECCSS--TTCCSEEEETTSTTHHHH---------------------------------SCEEEETTCCEEEEEEE
T ss_pred -----EecCC--CCCcceEEECcccccccC---------------------------------cccccCCCCEEEEEEEe
Confidence 00000 012246899998763210 11568899999999999
Q ss_pred CCCC--CCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeEEEeechhhhhcce
Q 009149 428 DEDI--IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQ 505 (542)
Q Consensus 428 ~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GM 505 (542)
.+.. .|||||||+.|+|++.+.. +..+.++||+.|+|+++++|+|++++||.|+||||+++|++.||
T Consensus 212 ~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM 280 (288)
T 3gdc_A 212 VLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGW 280 (288)
T ss_dssp CCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTC
T ss_pred CCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCC
Confidence 9853 5999999999999975421 23457999999999999999999999999999999999999999
Q ss_pred EEEEEEe
Q 009149 506 QFYLRVY 512 (542)
Q Consensus 506 m~~~~V~ 512 (542)
|..|+|.
T Consensus 281 ~~~~~V~ 287 (288)
T 3gdc_A 281 MGFFEVS 287 (288)
T ss_dssp EEEEEEE
T ss_pred CEEEEEe
Confidence 9999995
No 40
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=1.6e-29 Score=257.86 Aligned_cols=245 Identities=17% Similarity=0.150 Sum_probs=167.8
Q ss_pred CCeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEee---cCcccceeeeeeEEEcCCceEEEEEEe
Q 009149 190 PDGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEV---EGTHTLQTTYSSLDVHVGQSYSVLVTA 266 (542)
Q Consensus 190 ~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~---DG~~~~p~~~~~l~l~pgeR~dv~v~~ 266 (542)
...+++||+...|+|++++|+++|+||+|.+... .+||.|.+.+.+. ||.+. ++...|.||||+++.+++
T Consensus 23 ~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~---~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~~ 95 (339)
T 2zwn_A 23 YKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLP---HTIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFKA 95 (339)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEEESSSC---BCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEEC
T ss_pred EEEEEECCccCCCeEEEECCCEEEEEEEECCCCC---ccEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEEEC
Confidence 4689999998679999999999999999999743 3556666667765 99853 344579999999999999
Q ss_pred CCCCcceEEEEeeeecCC-c-cceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCCCccc
Q 009149 267 DQPARDYYIVVSSRFTST-V-LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGL 344 (542)
Q Consensus 267 ~~~~g~y~i~~~~~~~~~-~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~~~~~~ 344 (542)
+ .+|+||++++.....+ . ....+.+....... ..++.....+.. +. ..+ +..... ..+... .
T Consensus 96 ~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~---~~~~~~~d~e~~--l~-l~d--~~~~~~-~~~~~~------g 159 (339)
T 2zwn_A 96 D-RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQP---LPIEKRVTKDVI--MM-MST--WESAVA-DKYGEG------G 159 (339)
T ss_dssp C-SCEEEEEECCSSHHHHTTTSCCEEEEEEECSSC---CTTGGGCSEEEE--EE-EEE--ECGGGT-TCTTCC------C
T ss_pred C-CCEEEEEEecCCchhhhhcCCceEeEEecCCCc---ccccccCCceEE--EE-eeh--eecccc-cccCCC------C
Confidence 8 6999999998643111 1 12233333332211 011110001110 00 000 000000 000000 0
Q ss_pred cccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEeccCCcEEEEE
Q 009149 345 INTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIV 424 (542)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~ 424 (542)
.. ......|+|||+.|.. ...+.++.|++++|+
T Consensus 160 ----------~~---~~~~~~~~ING~~~~~----------------------------------~~~~~v~~G~~vrlr 192 (339)
T 2zwn_A 160 ----------TP---MNVADYFSVNAKSFPL----------------------------------TQPLRVKKGDVVKIR 192 (339)
T ss_dssp ----------ST---TSCCCEEEETTBCTTS----------------------------------SCCEEECTTCEEEEE
T ss_pred ----------CC---ccccceEEEccccCCC----------------------------------cccEEECCCCEEEEE
Confidence 00 0122468999987521 112578899999999
Q ss_pred EEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeEEEeechhh----
Q 009149 425 FQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWAR---- 500 (542)
Q Consensus 425 i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H---- 500 (542)
|.|.+...||||||||+|+|++.++.. +.+|.++||+.|+|++++.|+|++|+||.|++|||+++|
T Consensus 193 liN~~~~~h~~hlhGh~f~vi~~DG~~----------~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~ 262 (339)
T 2zwn_A 193 FFGAGGGIHAMHSHGHDMLVTHKDGLP----------LDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAG 262 (339)
T ss_dssp EEECSSSCEEEEETTCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBT
T ss_pred EEeCCCceEEEEECCcEEEEEEeCCee----------cCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccc
Confidence 999998899999999999999996532 234678999999999999999999999999999999999
Q ss_pred --hhcceEEEEEEecC
Q 009149 501 --QYLGQQFYLRVYTA 514 (542)
Q Consensus 501 --~d~GMm~~~~V~~~ 514 (542)
++.|||..++|...
T Consensus 263 ~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 263 GKHPGGPITVIEYDGV 278 (339)
T ss_dssp TBSSCSSEEEEEETTS
T ss_pred cccCCCcEEEEEECCC
Confidence 88999999999654
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.96 E-value=8.3e-30 Score=257.25 Aligned_cols=247 Identities=16% Similarity=0.171 Sum_probs=170.1
Q ss_pred CeEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeE-EEeecCcccceeeeeeEEEcCCceEEEEEEeCCC
Q 009149 191 DGILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMK-LVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQP 269 (542)
Q Consensus 191 ~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~-via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~~ 269 (542)
..+++||+...|+|++++|+++++|+.|... ..+.+|+||.... ..+.||.+. +....|.|||+++..++++ .
T Consensus 23 ~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~-~ 96 (318)
T 3g5w_A 23 HTFAFNGQVPAPLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAE-P 96 (318)
T ss_dssp EEEEETTBSSCCEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECC-S
T ss_pred EEEEECCccCCceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcC-C
Confidence 5889999988899999999999999999986 4568888887554 246899753 2335789999999999998 6
Q ss_pred CcceEEEEeeeecCCc--cceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCCCcccccc
Q 009149 270 ARDYYIVVSSRFTSTV--LTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLINT 347 (542)
Q Consensus 270 ~g~y~i~~~~~~~~~~--~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~~~~~~~~~ 347 (542)
+|+||++++.....+. ....+.|.+..... .+.+... +.+..+. ..+ +...... ..... .
T Consensus 97 ~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~---~~~~~~~--d~e~~l~-l~d--w~~~~~~-~~~~~------~--- 158 (318)
T 3g5w_A 97 AGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNP---LPIEKTV--TKDYILM-LSD--WVSSWAN-KPGEG------G--- 158 (318)
T ss_dssp CEEEEEECCSSHHHHHHHSCCEEEEEEECSSC---CHHHHTC--CEEEEEE-EEE--ECGGGTT-CTTCC------C---
T ss_pred CEEEEEEccCChhhhhccCCCEEEEEEcCCCc---ccccccc--cceeEEE-EEe--ecccccc-ccccC------C---
Confidence 9999999986421110 12333333332211 0000000 1000000 000 0000000 00000 0
Q ss_pred ceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEeccCCcEEEEEEEc
Q 009149 348 TKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQN 427 (542)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N 427 (542)
. .......|+|||+.|.. ...+.++.|++|+|+|.|
T Consensus 159 --------~--~~~~~d~~~ING~~~~~----------------------------------~~~l~v~~G~~vrlrliN 194 (318)
T 3g5w_A 159 --------I--PGDVFDYYTINAKSFPE----------------------------------TQPIRVKKGDVIRLRLIG 194 (318)
T ss_dssp --------C--TTCCCCEEEETTBCBTS----------------------------------SCCEEECTTCEEEEEEEE
T ss_pred --------C--CCCcCcEEEEcCcCCCC----------------------------------CccEEeCCCCEEEEEEEe
Confidence 0 00112359999987631 112578999999999999
Q ss_pred CCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeEEEeechhhhh-----
Q 009149 428 DEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQY----- 502 (542)
Q Consensus 428 ~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d----- 502 (542)
.+...||||||||.|+|++++++. +.+|.++||+.|+|++++.|+|+++|||.|+||||+++|++
T Consensus 195 ~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~ 264 (318)
T 3g5w_A 195 AGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKP 264 (318)
T ss_dssp CSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBS
T ss_pred CCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcC
Confidence 998899999999999999986532 23567899999999999999999999999999999999998
Q ss_pred -cceEEEEEEecCC
Q 009149 503 -LGQQFYLRVYTAS 515 (542)
Q Consensus 503 -~GMm~~~~V~~~~ 515 (542)
.|||..++|....
T Consensus 265 ~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 265 DGGIMTTIEYEEVG 278 (318)
T ss_dssp SCBSEEEEEETTTC
T ss_pred CCCCEEEEEECCCC
Confidence 6899999996643
No 42
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.90 E-value=2.8e-25 Score=223.28 Aligned_cols=232 Identities=13% Similarity=0.081 Sum_probs=139.2
Q ss_pred EEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccc----eeeeeeEEEcCCceEEEEEEeCC
Q 009149 193 ILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTL----QTTYSSLDVHVGQSYSVLVTADQ 268 (542)
Q Consensus 193 ~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~----p~~~~~l~l~pgeR~dv~v~~~~ 268 (542)
.++||... |+|++++|+++++||.|... ..+.+|.||..+. .+.||.+.. ++..+...|.||||++..+++++
T Consensus 52 ~~~n~~pG-P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~ 128 (306)
T 1sdd_A 52 SRTSGLLG-PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISE 128 (306)
T ss_dssp CSSCCSCC-CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCG
T ss_pred cccCCccC-CEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeCC
Confidence 45898765 99999999999999999875 5667788877642 368898752 22333567999999999999975
Q ss_pred CC---------cceEEEEeeeec---CCccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCC
Q 009149 269 PA---------RDYYIVVSSRFT---STVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNP 336 (542)
Q Consensus 269 ~~---------g~y~i~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~~~p 336 (542)
.. |+||++++.... ...+.+ ++|.++..+... ...+ + ..+ +++.+.+..
T Consensus 129 ~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G-~liV~~~~~~~~-~~~~--~--~~d------~e~~l~~~d------- 189 (306)
T 1sdd_A 129 HSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIG-PLLICKKGTLTE-DGTQ--K--MFE------KQHVLMFAV------- 189 (306)
T ss_dssp GGSCCSSSCSEEEEEEECCSSSHHHHHTTCCE-EEEEECTTCBCT-TSSB--S--SSC------CCCCCBCCE-------
T ss_pred ccCCCCCCCCceEEEEeccCCchhhhccCceE-EEEEccCCCCCc-cCCc--C--ccc------ceEEEEEEe-------
Confidence 43 699999985321 112222 344443221100 0000 0 000 000000000
Q ss_pred CCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEecc
Q 009149 337 QGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGAD 416 (542)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 416 (542)
+.-..+. .......|+|||+.|.. .| .+.++
T Consensus 190 --------------~d~~~~~-~~~~~~~~~ING~~~~~--~p--------------------------------~l~v~ 220 (306)
T 1sdd_A 190 --------------FDESKSW-NQTSSLMYTVNGYVNGT--MP--------------------------------DITVC 220 (306)
T ss_dssp --------------EETTSSS-SCCCCEEECSSSCCSSC--CC--------------------------------CCCCC
T ss_pred --------------ccccccc-ccCCCcceeeCCEecCC--Cc--------------------------------ceEEc
Confidence 0000000 00123458899987631 11 14578
Q ss_pred CCcEEEEEEEcCCC--CCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeEEE
Q 009149 417 YRAFIEIVFQNDED--IIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLR 494 (542)
Q Consensus 417 ~g~~v~~~i~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~H 494 (542)
.|++++|.|.|.+. ..||||||||.|++ .| .++||+.|.|++++.|+|++++||.|+||
T Consensus 221 ~G~~vrlrliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~h 281 (306)
T 1sdd_A 221 AHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTIA 281 (306)
T ss_dssp CC------BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCCB
T ss_pred CCCEEEEEEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEEE
Confidence 89999999999985 47999999999986 12 35899999999999999999999999999
Q ss_pred eechhhhhcceEEEEEEecC
Q 009149 495 SESWARQYLGQQFYLRVYTA 514 (542)
Q Consensus 495 CHil~H~d~GMm~~~~V~~~ 514 (542)
||+++|++.|||..|+|.+.
T Consensus 282 ch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 282 SLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp CCSTTTGGGTCBCCC-----
T ss_pred eCChHHHhcCCeEEEEEecC
Confidence 99999999999999999653
No 43
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.89 E-value=1.9e-22 Score=204.55 Aligned_cols=246 Identities=15% Similarity=0.116 Sum_probs=164.4
Q ss_pred CCeEEEcCCCCCceEEEecCcEEEEEEEEcCCC-ceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCC
Q 009149 190 PDGILINGRGSGAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ 268 (542)
Q Consensus 190 ~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~ 268 (542)
...+++||+...|+|++++|+++++|++|.... ..+.+|+||.. +.||.+. ...|.|||++++.++++
T Consensus 58 ~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~y~f~~~- 126 (327)
T 1kbv_A 58 YRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTSTFSFKAL- 126 (327)
T ss_dssp EEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEEEEEECC-
T ss_pred EEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEEEEEECC-
Confidence 357999999877999999999999999999753 46788888863 5788652 12489999999999998
Q ss_pred CCcceEEEEeeeec-CC-ccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCCCccccc
Q 009149 269 PARDYYIVVSSRFT-ST-VLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLIN 346 (542)
Q Consensus 269 ~~g~y~i~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~~~~~~~~ 346 (542)
.+|.||++|+.... .+ .....+.+.+.... .+|. .+....+. ..+ +...... .. . +...
T Consensus 127 ~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~-----~~p~---~d~e~~l~-~~d--~~~~~~~--~~-~-----g~~~ 187 (327)
T 1kbv_A 127 QPGLYIYHCAVAPVGMHIANGMYGLILVEPKE-----GLPK---VDKEFYIV-QGD--FYTKGKK--GA-Q-----GLQP 187 (327)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC---CSEEEEEE-EEE--ECBSSCT--TC-C-----EEEC
T ss_pred CCeEEEEEeCCCChhhhhhcceEEEEEEecCC-----CCCC---CceEEEEE-eee--eeccCcc--cc-c-----cccc
Confidence 58999999975311 11 11122333333221 1221 11110000 000 1111000 00 0 0000
Q ss_pred cceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEeccCCcEEEEEEE
Q 009149 347 TTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQ 426 (542)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 426 (542)
. .+..... .....+.|||+.+... ....+.++.|++++|+|.
T Consensus 188 ~----~~~~~~~--~~~~~~~iNG~~~~~~--------------------------------~~~~l~v~~G~~vRlRli 229 (327)
T 1kbv_A 188 F----DMDKAVA--EQPEYVVFNGHVGALT--------------------------------GDNALKAKAGETVRMYVG 229 (327)
T ss_dssp B----CHHHHHH--TCCSEEEETTSTTTTS--------------------------------GGGCEEEETTEEEEEEEE
T ss_pred c----ChhHhcc--CCCceEEEcCcccCCC--------------------------------CceeEEeCCCCEEEEEEE
Confidence 0 0000000 1123588999875310 012367899999999999
Q ss_pred cCC-CCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeEEEeechhhh-hcc
Q 009149 427 NDE-DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQ-YLG 504 (542)
Q Consensus 427 N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~-d~G 504 (542)
|.+ ...|+||||||.|+|++.+++.. +|.++||+.|.||+++.|.|++++||.|++|||+..|. ..|
T Consensus 230 N~~~~~~~~~~l~Gh~f~vi~~DG~~~-----------~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g 298 (327)
T 1kbv_A 230 NGGPNLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKG 298 (327)
T ss_dssp EEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSS
T ss_pred CCCCCCceeEEEeCCEEEEEEcCCCcC-----------CCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCC
Confidence 987 57899999999999999976532 25689999999999999999999999999999999995 889
Q ss_pred eEEEEEEecC
Q 009149 505 QQFYLRVYTA 514 (542)
Q Consensus 505 Mm~~~~V~~~ 514 (542)
|++.++|...
T Consensus 299 ~~a~l~~~g~ 308 (327)
T 1kbv_A 299 ALGQLKVEGA 308 (327)
T ss_dssp CEEEEEEESC
T ss_pred cEEEEEECCC
Confidence 9999999654
No 44
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.89 E-value=1.5e-22 Score=223.81 Aligned_cols=245 Identities=15% Similarity=0.133 Sum_probs=150.6
Q ss_pred cCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccce----eeeeeEEEcCCceEEEEEEeCCC--
Q 009149 196 NGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQ----TTYSSLDVHVGQSYSVLVTADQP-- 269 (542)
Q Consensus 196 NG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p----~~~~~l~l~pgeR~dv~v~~~~~-- 269 (542)
|+....|+|++++|+++++||.|... ..+.+|.||.... .+.||.+... ..+....|.|||+++..+++++.
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~g 140 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSG 140 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTS
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccC
Confidence 33444699999999999999999987 4557788776653 5789986421 22345679999999999999863
Q ss_pred ---Cc----ceEEEEeeeecCC---ccceEEEEEecCCCCCCCCCCCCCCcccccccccccccc----ccCCCCCCCCCC
Q 009149 270 ---AR----DYYIVVSSRFTST---VLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSI----RSNLTASGPRPN 335 (542)
Q Consensus 270 ---~g----~y~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l----~~~l~~~~~~~~ 335 (542)
+| .||+|++.....+ .+.+ ++|..+....... +..|..+.+..+. ...+ .+.+...
T Consensus 141 p~~~G~~c~T~wYHsH~~~~~q~~~GL~G-~lIV~~~~~~~~~---~~~~~~~~e~~l~-l~~~d~~~~w~~~~~----- 210 (647)
T 1sdd_B 141 PENPGSACRAWAYYSAVNPEKDIHSGLIG-PLLICRKGTLDKE---TNMPVDMREFVLL-FMVFDEKKSWYYDKK----- 210 (647)
T ss_dssp CCSSSCSEEEEEEECCSSHHHHHTTTCEE-EEEEECTTSSCTT---SCCCSSCCEEEEE-EEEEEGGGSSCCC-------
T ss_pred CCCCCCCceEEEEccCCCCcccccccCcc-CEEEeeCCCcccc---cCCCCcceeEEEE-EEeecCccccccccC-----
Confidence 57 9999998642111 2222 2333332211100 0011111111110 0000 1111000
Q ss_pred CCCCCCccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEec
Q 009149 336 PQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGA 415 (542)
Q Consensus 336 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 415 (542)
....+ . .+.... ......++|||+.|. .| .+.+
T Consensus 211 ~~~~~-------~---~~~~~~--~~~~~~~~iNG~~~~---~p--------------------------------~l~v 243 (647)
T 1sdd_B 211 PTRSW-------R---RASSEV--KNSHEFHAINGMIYN---LP--------------------------------GLRM 243 (647)
T ss_dssp -------------------------CCCEEEEETTBSSC---CC--------------------------------CCEE
T ss_pred ccccc-------c---cCCcch--hhcCceeccCCEecC---CC--------------------------------CeEE
Confidence 00000 0 000000 012356899998761 12 1467
Q ss_pred cCCcEEEEEEEcCCC--CCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeEE
Q 009149 416 DYRAFIEIVFQNDED--IIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNL 493 (542)
Q Consensus 416 ~~g~~v~~~i~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~ 493 (542)
+.|++|+|+|.|.+. ..||||+|||.|+|++.+ +.++||+.|.|++++.|+|++++||.|+|
T Consensus 244 ~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~ 307 (647)
T 1sdd_B 244 YEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLL 307 (647)
T ss_dssp ETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEE
T ss_pred cCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeec
Confidence 899999999999884 489999999999998652 35799999999999999999999999999
Q ss_pred EeechhhhhcceEEEEEEecCC
Q 009149 494 RSESWARQYLGQQFYLRVYTAS 515 (542)
Q Consensus 494 HCHil~H~d~GMm~~~~V~~~~ 515 (542)
|||+++|++.|||..|.|.+.+
T Consensus 308 hch~~~h~~~Gm~~~~~V~~~~ 329 (647)
T 1sdd_B 308 DTEVGEIQRAGMQTPFLIVDRE 329 (647)
T ss_dssp ECCCHHHHTTTCEEEEEEECTT
T ss_pred ccCcccccccccccceeeeccc
Confidence 9999999999999999997543
No 45
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.88 E-value=5e-22 Score=202.86 Aligned_cols=258 Identities=12% Similarity=0.094 Sum_probs=158.4
Q ss_pred CCCeEEEcCCCCCceEEEecCcEEEEEEEEcCC-CceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeC
Q 009149 189 LPDGILINGRGSGAAFNVEQGKTYRLRISNVGL-QNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTAD 267 (542)
Q Consensus 189 ~~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~-~~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~ 267 (542)
....+++||+...|+|++++|+++|+|++|... ...+.+++++... +.||..+ . .|.|||++++.++++
T Consensus 58 ~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~---~----~i~PG~~~~y~~~~~ 127 (340)
T 2bw4_A 58 EIHAMTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL---T----QVNPGEETTLRFKAT 127 (340)
T ss_dssp EEEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG---C----CBCTTEEEEEEEECC
T ss_pred EEEEEEECCCCCCCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc---e----EeCCCCEEEEEEECC
Confidence 346899999976799999999999999999973 2455667776542 2344322 1 399999999999998
Q ss_pred CCCcceEEEEeeee-----cCCccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCCC-
Q 009149 268 QPARDYYIVVSSRF-----TSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYH- 341 (542)
Q Consensus 268 ~~~g~y~i~~~~~~-----~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~~~- 341 (542)
.+|.||++++... ......+ +++.......+.....|.. .+.+..+. ..+ +.+.. .+.+.+.
T Consensus 128 -~~Gt~wyH~h~~~~~~~~~~~Gl~G-~~iV~~~~~~~~~~~~p~~--~d~e~~l~-l~D--~~~~~-----~~~g~~~~ 195 (340)
T 2bw4_A 128 -KPGVFVYHCAPEGMVPWHVTSGMNG-AIMVLPRDGLKDEKGQPLT--YDKIYYVG-EQD--FYVPK-----DEAGNYKK 195 (340)
T ss_dssp -SCEEEEEECCCTTCHHHHHHTTCEE-EEEEECTBCEECTTSCEEC--CSEEEEEE-EEE--ECCCB-----CTTSCBCC
T ss_pred -CCeEEEEEcCCCCchhhHHhCcCEE-EEEEccCcCcccccCCCcC--cceeEEEe-eee--eeecc-----ccCCcccc
Confidence 5999999998531 1112222 2333322110000001110 01110000 001 11100 0000000
Q ss_pred cccc--ccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEeccCCc
Q 009149 342 YGLI--NTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRA 419 (542)
Q Consensus 342 ~~~~--~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~ 419 (542)
+... ..... +.. + .......|+|||+.|.... ...+.++.|+
T Consensus 196 ~~~~~~~~~~~--~~~-~-~~~~~~~~~iNG~~~~~~~--------------------------------~~~l~v~~G~ 239 (340)
T 2bw4_A 196 YETPGEAYEDA--VKA-M-RTLTPTHIVFNGAVGALTG--------------------------------DHALTAAVGE 239 (340)
T ss_dssp CCSHHHHHHHH--HHH-H-HTTCCSEEEETTSTTTTSG--------------------------------GGCEEEETTC
T ss_pred cccccccccch--hhH-h-hcCCCCEEEECCccCCccC--------------------------------CCceEcCCCC
Confidence 0000 00000 000 0 0011246899998763210 1226788999
Q ss_pred EEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCC-cceEEEeCCCCEEEEEEEecCceeeEEEeech
Q 009149 420 FIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAV-ARVTVQVYPKSWSAIYIALDNVGMWNLRSESW 498 (542)
Q Consensus 420 ~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~-~rDTv~vpp~g~~~irf~adnpG~w~~HCHil 498 (542)
+++|++.|.+...|++|+|||.|+|+. + |.+. ..|. ++||+.|.+|+.+.|.|++++||.|+||||++
T Consensus 240 r~Rl~n~~~~~~~~~~~i~gh~~~Vi~-d-G~~~---------~~p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~~ 308 (340)
T 2bw4_A 240 RVLVVHSQANRDTRPHLIGGHGDYVWA-T-GKFR---------NPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNL 308 (340)
T ss_dssp EEEEEEEESSSCBCEEEETCCEEEEET-T-CCTT---------SCCEEEESCCCBCTTEEEEEEEECCSCEEEEEEESSH
T ss_pred EEEEEECCCCCccceEEecCcceEEeC-C-Cccc---------CCccccceEEEeCCCceEEEEEECCCCeeeEEEcCch
Confidence 999988888778899999999999996 3 3221 1122 57999999999999999999999999999999
Q ss_pred -hhhhcceEEEEEEecCC
Q 009149 499 -ARQYLGQQFYLRVYTAS 515 (542)
Q Consensus 499 -~H~d~GMm~~~~V~~~~ 515 (542)
+|++.|||+.|+|....
T Consensus 309 ~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 309 IEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp HHHHTTSCEEEEEEESCC
T ss_pred HHHHhCCCEEEEEECCCC
Confidence 69999999999997644
No 46
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.86 E-value=1.5e-20 Score=191.32 Aligned_cols=259 Identities=10% Similarity=0.025 Sum_probs=151.0
Q ss_pred CCeEEEcCCCCCceEEEecCcEEEEEEEEcCCC-ceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCC
Q 009149 190 PDGILINGRGSGAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ 268 (542)
Q Consensus 190 ~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~ 268 (542)
...+++||+...|.|++++|+++++|+.|.+.. ..+.++++++. ..||. .+. . .|.||+++++.++++
T Consensus 52 ~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~--~~~--~--~i~PG~~~~y~f~~~- 120 (333)
T 1mzy_A 52 LQAMTFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGG--GGL--T--LINPGEKVVLRFKAT- 120 (333)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGG--GGG--C--CBCTTEEEEEEEECC-
T ss_pred EEEEEECCccCCCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCC--Cce--e--EeCCCCEEEEEEECC-
Confidence 358899999877999999999999999999642 22334444321 12222 111 1 399999999999998
Q ss_pred CCcceEEEEeeee------cCCccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCCC-
Q 009149 269 PARDYYIVVSSRF------TSTVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYH- 341 (542)
Q Consensus 269 ~~g~y~i~~~~~~------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~~~- 341 (542)
.+|.||++|+... ......+.-|+. .....+.....|. ..+.++.+ ...+ +.+.. .....+.
T Consensus 121 ~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~-~~~~~~~~~~~p~--~~d~e~~l-~l~D--~~~~~-----~~~g~~~~ 189 (333)
T 1mzy_A 121 RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVL-PRDGLKDHEGKPV--RYDTVYYI-GESD--HYIPK-----DEDGTYMR 189 (333)
T ss_dssp SCEEEEEECCCSTTHHHHHHHTTCEEEEEEE-CTTCCBCTTSCBC--CCSEEEEE-EEEE--ECCCB-----CTTSCBCC
T ss_pred CCEEEEEeecCCcccchhhhhCCCEEEEEEc-cCcCccccccCCC--ccchheee-eeee--eccCc-----cccccccc
Confidence 5999999998641 111232332333 1111100000111 01111100 0011 11100 0000000
Q ss_pred ccccccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEeccCCcEE
Q 009149 342 YGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFI 421 (542)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 421 (542)
+........-.+.. + .......|+|||+.+..+. ...+.++.|+++
T Consensus 190 ~~~~~~~~~~~~~~-~-~~~~~~~~~ING~~~~~~~--------------------------------~~~l~v~~Ger~ 235 (333)
T 1mzy_A 190 FSDPSEGYEDMVAV-M-DTLIPSHIVFNGAVGALTG--------------------------------EGALKAKVGDNV 235 (333)
T ss_dssp CSSHHHHHHHHHHH-H-TTTCCSEEEETTSTTTTSG--------------------------------GGCEEEETTCEE
T ss_pred cccccccccchhHH-h-hccCCcEEEECCcccccCC--------------------------------CcceEecCCCEE
Confidence 00000000000000 0 0011246899998753210 112678899999
Q ss_pred EEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCC-cceEEEeCCCCEEEEEEEecCceeeEEEeechhh
Q 009149 422 EIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAV-ARVTVQVYPKSWSAIYIALDNVGMWNLRSESWAR 500 (542)
Q Consensus 422 ~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~-~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H 500 (542)
+|++.|.+...|++++|||.|+|++ + |.+.. .|. ++||+.|.|++.+.+.|.+++||.|+||||+++|
T Consensus 236 Rl~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~~---------~p~~~~dtv~l~pGer~~v~v~a~~pG~y~~~ch~~~h 304 (333)
T 1mzy_A 236 LFVHSQPNRDSRPHLIGGHGDLVWE-T-GKFHN---------APERDLETWFIRGGTAGAALYKFLQPGVYAYVNHNLIE 304 (333)
T ss_dssp EEEEEESSSCBCEEEETCCEEEEET-T-CCTTS---------CCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHH
T ss_pred EEEECCCCCccccEEECCCCeEEEe-C-CcccC---------CCccCcceEEECCCceEEEEEEcCCCEEEEEecChhhh
Confidence 9887776555555667889999987 3 32211 122 6899999999999999999999999999999999
Q ss_pred h-hcceEEEEEEecCC
Q 009149 501 Q-YLGQQFYLRVYTAS 515 (542)
Q Consensus 501 ~-d~GMm~~~~V~~~~ 515 (542)
+ +.|||..|+|....
T Consensus 305 ~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 305 AVHKGATAHVLVEGEW 320 (333)
T ss_dssp HHTTCCEEEEEEESCC
T ss_pred HhhCCCEEEEEEcCCC
Confidence 7 99999999997643
No 47
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.85 E-value=7.8e-23 Score=227.75 Aligned_cols=245 Identities=12% Similarity=0.081 Sum_probs=153.6
Q ss_pred CCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCC---------CC
Q 009149 200 SGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ---------PA 270 (542)
Q Consensus 200 ~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~---------~~ 270 (542)
..|.|+++.|++++++|.|... ..+.+|.||..+....-||.+- ....|.||++++..+++++ .+
T Consensus 197 pGP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~ 270 (770)
T 2r7e_B 197 LGPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDC 270 (770)
T ss_dssp CCCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSE
T ss_pred CCCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCC
Confidence 3599999999999999999986 5668888887665444357642 1246899999999999874 57
Q ss_pred cceEEEEeeeecCC-ccceEEEEEecCCCCCCCCCCCCCCcccccccccc--ccc-cccCCCCC--CCCCCCCCCCCccc
Q 009149 271 RDYYIVVSSRFTST-VLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQ--ARS-IRSNLTAS--GPRPNPQGSYHYGL 344 (542)
Q Consensus 271 g~y~i~~~~~~~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~--~~~-l~~~l~~~--~~~~~p~~~~~~~~ 344 (542)
|.||.+++.....+ .....|.|.+...........+ +..+.++.+.. ... ..+-+... .....|.. +..
T Consensus 271 Gt~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~--~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~-~~~-- 345 (770)
T 2r7e_B 271 KAWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGR--QVTVQEFALFFTIFDETKSWYFTENMERNCRAPCN-IQM-- 345 (770)
T ss_dssp EEEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCC--CCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSC-CCS--
T ss_pred eeEEeeccCCcHHHHhCCceeeEEECCCcccccccCC--CccceEEEEEEeecCccccchhccchhhcccCccc-ccc--
Confidence 89999988643211 1122233333322111000000 10111110000 000 00000000 00000100 000
Q ss_pred cccceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEeccCCcEEEEE
Q 009149 345 INTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIV 424 (542)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~ 424 (542)
.+.. |. .....|+|||+.|.. . ..+.++.|++|+|.
T Consensus 346 --~d~~--~~------~~~~~~~ING~~~~~--~--------------------------------~~l~v~~Ge~vr~r 381 (770)
T 2r7e_B 346 --EDPT--FK------ENYRFHAINGYIMDT--L--------------------------------PGLVMAQDQRIRWY 381 (770)
T ss_dssp --SSSS--ST------TTSCEECTTSCTTTT--C--------------------------------CCCCCCSSSCEEEE
T ss_pred --CCcc--cc------ccCCccccCCccCCC--C--------------------------------CCeEEeCCCEEEEE
Confidence 0000 00 112357889876521 1 11457899999999
Q ss_pred EEcCCC--CCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeEEEeechhhhh
Q 009149 425 FQNDED--IIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQY 502 (542)
Q Consensus 425 i~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d 502 (542)
|.|.+. ..||||||||.|+|++.++ .++||+.|+|++++.|+|++|+||.|+||||+++|++
T Consensus 382 liN~g~~~~~H~fHlhGh~f~Vv~~dg----------------~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~ 445 (770)
T 2r7e_B 382 LLSMGSNENIHSIHFSGHVFTVRKKEE----------------YKMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHLH 445 (770)
T ss_dssp CCCCCSSSCCCEEEBSSCCEECCSSSC----------------CEESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHHT
T ss_pred EEeCCCCcceEEEEEcCCEEEEEecCC----------------ceeeEEEECCCeEEEEEEEeCCCCceEEEeccccccc
Confidence 999874 4899999999999997642 2899999999999999999999999999999999999
Q ss_pred cceEEEEEEecCC
Q 009149 503 LGQQFYLRVYTAS 515 (542)
Q Consensus 503 ~GMm~~~~V~~~~ 515 (542)
.|||..|.|...+
T Consensus 446 ~GM~~~~~V~s~~ 458 (770)
T 2r7e_B 446 AGMSTLFLVYSNK 458 (770)
T ss_dssp TBCCCCCCBCCSS
T ss_pred ccccccccccccc
Confidence 9999999995433
No 48
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.83 E-value=7.1e-20 Score=193.65 Aligned_cols=248 Identities=14% Similarity=0.093 Sum_probs=166.0
Q ss_pred CCeEEEcCCCCCceEEEecCcEEEEEEEEcCCC-ceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCC
Q 009149 190 PDGILINGRGSGAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ 268 (542)
Q Consensus 190 ~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~ 268 (542)
...+++||+...|.|+++.|+++++||.|.... ..+.+|+||+. ..||... ...|.||+++++.++++
T Consensus 48 ~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~- 116 (442)
T 2zoo_A 48 YVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKAL- 116 (442)
T ss_dssp EEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECC-
T ss_pred EEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcC-
Confidence 357899999877999999999999999999642 57789999965 4688643 23589999999999998
Q ss_pred CCcceEEEEeeee-cCC-ccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCCCccccc
Q 009149 269 PARDYYIVVSSRF-TST-VLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSYHYGLIN 346 (542)
Q Consensus 269 ~~g~y~i~~~~~~-~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~~~~~~~~ 346 (542)
.+|.||++|+... ..+ .....+.|.+.... .+|. .+.++.+. ..+ +.+...... + +
T Consensus 117 ~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~-----~~~~---~d~e~~l~-l~d--~~~~~~~~~--~------~--- 174 (442)
T 2zoo_A 117 NPGLYIYHCATAPVGMHIANGMYGLILVEPKE-----GLAP---VDREYYLV-QGD--FYTKGEFGE--A------G--- 174 (442)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC---CSEEEEEE-EEE--ECBSSCTTC--C------E---
T ss_pred CCeEEEEecCCCChHHHHhCccEEEEEEeCCC-----CCCC---CCceEEEE-eee--eeccCcccc--c------c---
Confidence 6999999996321 111 11233444444321 1111 11111110 011 111100000 0 0
Q ss_pred cceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEeccCCcEEEEEEE
Q 009149 347 TTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQ 426 (542)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 426 (542)
...+.+.... ......++|||+.+... ....+.++.|++++|.|.
T Consensus 175 -~~~~~~~~~~--~~~~~~~liNG~~~~~~--------------------------------~~~~l~v~~G~~vrlrli 219 (442)
T 2zoo_A 175 -LQPFDMAKAI--DEDADYVVFNGSVGSTT--------------------------------DENSLTAKVGETVRLYIG 219 (442)
T ss_dssp -EECBCHHHHH--TTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCEEEEEEE
T ss_pred -cccCChhHhc--cCCCCEEEECCCcCCCC--------------------------------CCCceEeCCCCEEEEEEE
Confidence 0000000000 01124578999864211 001267889999999999
Q ss_pred cCC-CCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeEEEeechhh-hhcc
Q 009149 427 NDE-DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWAR-QYLG 504 (542)
Q Consensus 427 N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H-~d~G 504 (542)
|.+ ...|+||+||+.|+|++.+++.. .|.+.|++.|.|++.+.|.|++++||.|++|||.+.| .+.|
T Consensus 220 N~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g 288 (442)
T 2zoo_A 220 NGGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKG 288 (442)
T ss_dssp EEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTS
T ss_pred eCCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccC
Confidence 976 47899999999999999976422 2568899999999999999999999999999999999 5999
Q ss_pred eEEEEEEecCCc
Q 009149 505 QQFYLRVYTAST 516 (542)
Q Consensus 505 Mm~~~~V~~~~~ 516 (542)
|+..++|...+.
T Consensus 289 ~~a~l~v~~~~~ 300 (442)
T 2zoo_A 289 ALAMLKVEGPDD 300 (442)
T ss_dssp CEEEEEEESCCC
T ss_pred ceEEEEecCCCC
Confidence 999999966543
No 49
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.81 E-value=9.4e-19 Score=178.29 Aligned_cols=256 Identities=13% Similarity=0.146 Sum_probs=155.4
Q ss_pred CCeEEEcCCCCCceEEEecCcEEEEEEEEcCCC-ceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCC
Q 009149 190 PDGILINGRGSGAAFNVEQGKTYRLRISNVGLQ-NSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ 268 (542)
Q Consensus 190 ~~~~liNG~~~~~~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~ 268 (542)
...+++||+...|+|++++|+++++|+.|.... ..+.++++++.. +.||..+. .|.||+++++.++++
T Consensus 53 ~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~~-------~i~pG~~~~y~f~~~- 121 (336)
T 1oe1_A 53 LQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKLT-------NVNPGEQATLRFKAD- 121 (336)
T ss_dssp EEEEEETTBSSCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGGC-------CBCTTEEEEEEEECC-
T ss_pred EEEEEECCccCCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcceE-------EeCCCCEEEEEEECC-
Confidence 368899999877999999999999999999742 466788888752 22333221 389999999999998
Q ss_pred CCcceEEEEeeeec-----CCccceEEEEEecCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCC-Cc
Q 009149 269 PARDYYIVVSSRFT-----STVLTTTGILHYSNSAGPVSGPIPGGPTVQIDWSLNQARSIRSNLTASGPRPNPQGSY-HY 342 (542)
Q Consensus 269 ~~g~y~i~~~~~~~-----~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~~-~~ 342 (542)
.+|.||++++.... .....+.-|++-... .+. +.+.....+.++.+ ...+ +.+.. ...+.+ .+
T Consensus 122 ~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~-~~~--~~~~~~~~D~e~~l-~~~D--~~~~~-----~~~g~~~~~ 190 (336)
T 1oe1_A 122 RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDG-LKD--PQGKPLHYDRAYTI-GEFD--LYIPK-----GPDGKYKDY 190 (336)
T ss_dssp SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTC-CBC--TTSCBCCCSEEEEE-EEEE--ECCCB-----CTTSSBCCC
T ss_pred CCeEEEEecCCCCchhHHHhCCCeEEEEEecCcC-Ccc--cccCcccCCceeEe-eeee--eeecc-----ccCCceeec
Confidence 59999999985311 112223223332211 100 11110001111100 0001 11100 000000 00
Q ss_pred ccc-cc-ceEEEecccccccCCeEEEEEcCeeecCCCCchhhhcccccCcceecCCCCCCCCCCCccccceEEeccCCcE
Q 009149 343 GLI-NT-TKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAF 420 (542)
Q Consensus 343 ~~~-~~-~~~~~~~~~~~~~~~~~~~~iNg~~f~~~~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 420 (542)
... .. ... +.. +. ......+.|||+.+... +...+.++.|++
T Consensus 191 ~~~~~~~~~~--~~~-~~-~~~~~~~liNG~~~~~~--------------------------------~~~~l~v~~Ger 234 (336)
T 1oe1_A 191 ATLAESYGDT--VQV-MR-TLTPSHIVFNGKVGALT--------------------------------GANALTAKVGET 234 (336)
T ss_dssp SSTGGGHHHH--HHH-HH-TTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCE
T ss_pred ccccccccch--hhH-hh-cCCCCEEEECCeeccCC--------------------------------CCcceEcCCCCE
Confidence 000 00 000 000 00 01123688999765311 112367889999
Q ss_pred EEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCC--cceEEEeCCCCEEEEEEEecCceeeEEEeech
Q 009149 421 IEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAV--ARVTVQVYPKSWSAIYIALDNVGMWNLRSESW 498 (542)
Q Consensus 421 v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~--~rDTv~vpp~g~~~irf~adnpG~w~~HCHil 498 (542)
++|+..+.+...+++++|||.|.|+. + |.+- +|. +.||+.|++|+.+.+.+.+++||.|+||||.+
T Consensus 235 vRlin~~~~~~~~~~~i~gh~~~Vi~-D-G~~~----------~p~~~~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~ 302 (336)
T 1oe1_A 235 VLLIHSQANRDTRPHLIGGHGDWVWE-T-GKFA----------NPPQRDLETWFIRGGSAGAALYTFKQPGVYAYLNHNL 302 (336)
T ss_dssp EEEEEEESSSCBCEEETTCCEEEEET-T-CCTT----------SCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSH
T ss_pred EEEEecCCCCccceEEECCcCceEeC-C-CcCc----------CCccccceEEEECCCCcEEEEEEcCCCceEEEEechh
Confidence 99866666556677677999999996 3 3221 222 46999999999999999999999999999999
Q ss_pred hhh-hcceEEEEEEecCC
Q 009149 499 ARQ-YLGQQFYLRVYTAS 515 (542)
Q Consensus 499 ~H~-d~GMm~~~~V~~~~ 515 (542)
.|. +.||++.|+|....
T Consensus 303 ~~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 303 IEAFELGAAGHIKVEGKW 320 (336)
T ss_dssp HHHHTTSCEEEEEEESCC
T ss_pred hccccCCCeEEEEECCCC
Confidence 885 99999999997543
No 50
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.66 E-value=4e-15 Score=157.05 Aligned_cols=233 Identities=12% Similarity=0.067 Sum_probs=151.4
Q ss_pred eEEEEEEEEEEEecCCC-----------eeeEEEEEcCCCccceEEEecCCEEEEEEEeCCC-CCceEEe-ccccCCCCC
Q 009149 28 YRFFNWNVTYGDIYPLG-----------VRQRGILINWQFPGPDIHSVTNDNLIINVFNSLD-EPFLLSW-NGIQNRRNS 94 (542)
Q Consensus 28 ~~~~~l~i~~~~~~~~G-----------~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-~~~~iH~-HG~~~~~~~ 94 (542)
.+++.|.+++-....+| .....+++||+. .|+|+|++| ++++|+.|... ....+|+ ||..+.. .
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 45777888766554433 234689999995 799999999 99999999984 5678999 8875543 4
Q ss_pred CCCCCc----c-c-CCCCCCCCeEEEEEEECCCceeeeEecchhhhhhcceee-----------E-EEEeCCCCCCCCCC
Q 009149 95 FEDGVY----G-T-TCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFG-----------G-IRILSRPRIPVPFP 156 (542)
Q Consensus 95 ~~DGv~----~-~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G-----------~-liV~~~~~~~~~~~ 156 (542)
..||.+ . + +..|.||+++++.+++ ++.|+||++++........+.| + +-+....... +.
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~-~~- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLP-LV- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCc-Cc-
Confidence 689964 2 3 6789999999999996 4689999999865322211111 1 1111110000 00
Q ss_pred CCCCCeEEEEEeeeccch-hhHHHhhccCCCCCCCCeEEEcCCCC---CceEEEecCcEEEEEEEEcCCCceEEEEEecc
Q 009149 157 DPAGDYTVLIGDWYKSNH-TDLRAHLDKGKKLPLPDGILINGRGS---GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNH 232 (542)
Q Consensus 157 ~~~~e~~l~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~liNG~~~---~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh 232 (542)
..+.+..|..+..... ......+.- . ..++|||+.. .+.+.++.|++++|+|+|. ..+.||||||
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l-----~-~~~~iNg~~f~~~~~~~~~~~G~~~~~~l~N~---~~HP~HLHGh 374 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISL-----G-DDPGINGQLWDVNRIDVTAQQGTWERWTVRAD---EPQAFHIEGV 374 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEE-----C-SSSSBTTBCCCTTCCCEEEETTCEEEEEEEEE---EEEEEEETTC
T ss_pred --cccCccccCCCCCCCCCCcceEEEEE-----e-eEEEECCEeCCCCCCcEEcCCCCEEEEEEECC---CCcCeEECCc
Confidence 0000000000000000 000000000 0 0467999973 2468999999999999998 4789999999
Q ss_pred eeEEEeecCccc---ceeeeeeEEEcCCceEEEEEEeCCCCcc----eEEEEeee
Q 009149 233 KMKLVEVEGTHT---LQTTYSSLDVHVGQSYSVLVTADQPARD----YYIVVSSR 280 (542)
Q Consensus 233 ~~~via~DG~~~---~p~~~~~l~l~pgeR~dv~v~~~~~~g~----y~i~~~~~ 280 (542)
.|+|++.||.+. +|..+|++.| |+++.|.|+++ .+|. |.++|+..
T Consensus 375 ~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~HCHil 426 (451)
T 2uxt_A 375 MFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFNSQTL 426 (451)
T ss_dssp EEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEEESSH
T ss_pred eEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEeCCch
Confidence 999999999876 4678999999 99999999998 5666 99999964
No 51
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.65 E-value=3.4e-15 Score=157.28 Aligned_cols=232 Identities=13% Similarity=0.144 Sum_probs=161.0
Q ss_pred eEEEEEEEEEEEecC------------CCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCC-CCceEEeccccCCCCC
Q 009149 28 YRFFNWNVTYGDIYP------------LGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLD-EPFLLSWNGIQNRRNS 94 (542)
Q Consensus 28 ~~~~~l~i~~~~~~~------------~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-~~~~iH~HG~~~~~~~ 94 (542)
.+++.|.+++-.... .|.....+++||+. .|+|+|++| ++++|+.|... ....+|++|..... .
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i 222 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-I 222 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-E
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-E
Confidence 467777776543322 13344678999996 799999999 99999999984 46799999976554 4
Q ss_pred CCCCCcc-----c-CCCCCCCCeEEEEEEECCCceeeeEecchhhh--hh-cce--------------eeEEEE--eCCC
Q 009149 95 FEDGVYG-----T-TCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH--KA-AGG--------------FGGIRI--LSRP 149 (542)
Q Consensus 95 ~~DGv~~-----~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q--~~-~Gl--------------~G~liV--~~~~ 149 (542)
..||.+. + ...|.||++++..+++ +++|.||++|+.... .. .|| ....++ .+..
T Consensus 223 ~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 223 AADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred ecCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 6899753 3 5669999999999996 569999999984311 00 122 122222 2211
Q ss_pred C-CCCC-----CCCCCCCeEEEEEeeeccchhhHHHhhccCCCCCCCCeEEEcCCCC---CceEEEecCcEEEEEEEEcC
Q 009149 150 R-IPVP-----FPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGS---GAAFNVEQGKTYRLRISNVG 220 (542)
Q Consensus 150 ~-~~~~-----~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~---~~~~~v~~G~~~rlRliNa~ 220 (542)
. .+.| +........ . ....+... . .+..++|||+.. .+.+.++.|++++|+|.|.+
T Consensus 302 ~~~~~p~~l~~~~~l~~~~~-~-r~~~l~~~----------~---~g~~~~iNg~~~~~~~~~~~~~~g~~~~~~~~N~~ 366 (439)
T 2xu9_A 302 KPLPLPKALSPFPTLPAPVV-T-RRLVLTED----------M---MAARFFINGQVFDHRRVDLKGQAQTVEVWEVENQG 366 (439)
T ss_dssp CCCCCCSCCCCCCCCCCCSE-E-EEEEEEEE----------G---GGTEEEETTBCCCTTCCCEEECTTCEEEEEEEECS
T ss_pred ccccCcccCCCcccCCCCCc-c-eEEEEEee----------c---cCceEeECCEECCCCCCceecCCCCEEEEEEEcCC
Confidence 1 0111 100000000 0 00000000 0 113789999973 24589999999999999998
Q ss_pred CCceEEEEEecceeEEEeecCccc-ceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009149 221 LQNSLNFRIQNHKMKLVEVEGTHT-LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 221 ~~~~~~~~i~gh~~~via~DG~~~-~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
. ..|+||||||.|+|++.+|... .|..+|++.|.||+++.+.++++ .+|.|.++|+..
T Consensus 367 ~-~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil 425 (439)
T 2xu9_A 367 D-MDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKGRTVFHCHIV 425 (439)
T ss_dssp S-SCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred C-CCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCCCEEEECCcc
Confidence 6 5679999999999999999875 47889999999999999999987 799999999864
No 52
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.62 E-value=1.5e-16 Score=133.61 Aligned_cols=90 Identities=18% Similarity=0.314 Sum_probs=71.0
Q ss_pred CCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCC--CCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecch
Q 009149 54 WQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRN--SFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSL 131 (542)
Q Consensus 54 g~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~--~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~ 131 (542)
-+|++|+|++++||+|+ ++|.+...+++||||..++.. ..+||.+..++.|.||++++|+|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~- 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA- 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT-
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC-
Confidence 36789999999999975 679988999999999865421 0122222115779999999999985468999999999
Q ss_pred hhhhhcceeeEEEEeC
Q 009149 132 AFHKAAGGFGGIRILS 147 (542)
Q Consensus 132 ~~q~~~Gl~G~liV~~ 147 (542)
.|..+||.|.|+|++
T Consensus 91 -~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 -PHRGAGMVGKITVEG 105 (105)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -CchhcCCEEEEEEcC
Confidence 567889999999974
No 53
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.60 E-value=1.8e-14 Score=154.76 Aligned_cols=226 Identities=12% Similarity=0.150 Sum_probs=151.4
Q ss_pred eEEEEEcCCCc---------cceEEEecCCEEEEEEEeCCC-CCceEEeccccCCCCCCCCCCcc----c-CCCCCCCCe
Q 009149 47 QRGILINWQFP---------GPDIHSVTNDNLIINVFNSLD-EPFLLSWNGIQNRRNSFEDGVYG----T-TCPIPPGKN 111 (542)
Q Consensus 47 ~~~~~~Ng~~p---------gP~i~v~~Gd~v~i~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~-q~~i~pG~~ 111 (542)
...+++||+.. -|+|+|++|+++++|+.|... ....+|++|..... ...||.+. + ...|.||++
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccce
Confidence 35789999843 189999999999999999984 46789999875543 46899743 2 466999999
Q ss_pred EEEEEEECCCceeeeEecchh---hhhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccch--h---------hH
Q 009149 112 FTYILQVKDQIGSFYYFPSLA---FHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNH--T---------DL 177 (542)
Q Consensus 112 ~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~--~---------~~ 177 (542)
++..+++.+.+|.||.+++.. .....|+..+++.........|..... +. ..+.+...... . ..
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~-~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SG-TALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CS-CBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cc-cccchhhcccCCcccCCCcccCCcc
Confidence 999999755579999999854 122334444555443221111110000 00 00000000000 0 00
Q ss_pred HH--hhccCCCCCCCCeEEEcCCCCC------------------------ceEEEecCcEEEEEEEEcCCCceEEEEEec
Q 009149 178 RA--HLDKGKKLPLPDGILINGRGSG------------------------AAFNVEQGKTYRLRISNVGLQNSLNFRIQN 231 (542)
Q Consensus 178 ~~--~~~~~~~~~~~~~~liNG~~~~------------------------~~~~v~~G~~~rlRliNa~~~~~~~~~i~g 231 (542)
.. .+..+. ......++|||+... +.+.++.|++++++|+| ...|+|||||
T Consensus 348 ~~~~~l~~~~-~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHG 423 (521)
T 1v10_A 348 DINLNLRIGR-NATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHG 423 (521)
T ss_dssp SEEEECCEEC-CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESS
T ss_pred eEEEEEEEec-CCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEcc
Confidence 00 000000 001125789998631 34789999999999999 3568999999
Q ss_pred ceeEEEeecCcc----cceeeeeeEEE-cCCceEEEEEEeCCCCcceEEEEeee
Q 009149 232 HKMKLVEVEGTH----TLQTTYSSLDV-HVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 232 h~~~via~DG~~----~~p~~~~~l~l-~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
|.|+|++.+|.. ..|..+|++.| .||+++.+.++++ .||.|.+||+..
T Consensus 424 h~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~ 476 (521)
T 1v10_A 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHID 476 (521)
T ss_dssp CCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCEEEEEEESCH
T ss_pred ceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChH
Confidence 999999999875 35889999999 7999999999998 799999999964
No 54
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.60 E-value=4.7e-14 Score=151.04 Aligned_cols=247 Identities=11% Similarity=0.093 Sum_probs=160.3
Q ss_pred EEEEEEEEEEecCCCe-----eeEEEEEcCCCc--------cceEEEecCCEEEEEEEeCCC-CCceEEeccccCCCCCC
Q 009149 30 FFNWNVTYGDIYPLGV-----RQRGILINWQFP--------GPDIHSVTNDNLIINVFNSLD-EPFLLSWNGIQNRRNSF 95 (542)
Q Consensus 30 ~~~l~i~~~~~~~~G~-----~~~~~~~Ng~~p--------gP~i~v~~Gd~v~i~v~N~l~-~~~~iH~HG~~~~~~~~ 95 (542)
++.|.+++-....++. ....+++||+.. .|+|+|++|+++++|+.|... ....+|++|..+.. ..
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 4556665544333332 235789999853 289999999999999999984 46789998875543 46
Q ss_pred CCCCcc----c-CCCCCCCCeEEEEEEECCCceeeeEecchh--hh-----hhcceeeEEEEeCCCCCCCCCCCCCCCeE
Q 009149 96 EDGVYG----T-TCPIPPGKNFTYILQVKDQIGSFYYFPSLA--FH-----KAAGGFGGIRILSRPRIPVPFPDPAGDYT 163 (542)
Q Consensus 96 ~DGv~~----~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~--~q-----~~~Gl~G~liV~~~~~~~~~~~~~~~e~~ 163 (542)
.||.+. + ...|.||++++..+++.+.+|.||.+++.. .+ ...|+..+++.........|......+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 899743 2 456899999999999755579999999853 11 2334434444443221111110000000
Q ss_pred EEEEeeeccch--hhHHH---------hhccCCCCCCCCeEEEcCCCCC------------------------ceEEEec
Q 009149 164 VLIGDWYKSNH--TDLRA---------HLDKGKKLPLPDGILINGRGSG------------------------AAFNVEQ 208 (542)
Q Consensus 164 l~l~d~~~~~~--~~~~~---------~~~~~~~~~~~~~~liNG~~~~------------------------~~~~v~~ 208 (542)
..+.+..+... ..... .+.-.. ......++|||+... ..++++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~-~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQL-GFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCE-EEETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEe-eccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00000000000 00000 000000 001126889998731 2478999
Q ss_pred CcEEEEEEEEcCCCceEEEEEecceeEEEeecCccc----ceeeeeeEEE-cCCceEEEEEEeCCCCcceEEEEeee
Q 009149 209 GKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHT----LQTTYSSLDV-HVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 209 G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~----~p~~~~~l~l-~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
|++++++|+|......|+||||||.|+|++.+|... .|..+|++.| .||+++.+.++++ .||.|.+||+..
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil 455 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIE 455 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCeeeeEecCch
Confidence 999999999544446789999999999999998763 5889999999 7999999999998 799999999964
No 55
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.56 E-value=1.2e-14 Score=143.42 Aligned_cols=100 Identities=16% Similarity=0.221 Sum_probs=84.7
Q ss_pred EEEcCCC--ccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCc--------cc-CCCCCCCCeEEEEEEE
Q 009149 50 ILINWQF--PGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVY--------GT-TCPIPPGKNFTYILQV 118 (542)
Q Consensus 50 ~~~Ng~~--pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~--------~~-q~~i~pG~~~~Y~f~~ 118 (542)
|+|||+. ++|.|++++||+|+++|.|.....+++||||..... ..+|.. .. ++.|.||++++|.|.+
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v--~~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWAD--NRTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEES--SSSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEE--eccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 6999998 899999999999999999999899999999975543 235431 12 4669999999999995
Q ss_pred CC--CceeeeEecchhhhhhcceeeEEEEeCCCCC
Q 009149 119 KD--QIGSFYYFPSLAFHKAAGGFGGIRILSRPRI 151 (542)
Q Consensus 119 ~~--~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~ 151 (542)
.. .+|+||||||...|...||.|.|+|++++..
T Consensus 235 ~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~~ 269 (276)
T 3kw8_A 235 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 269 (276)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred ccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCCC
Confidence 31 5999999999999999999999999987643
No 56
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.50 E-value=2.7e-13 Score=144.28 Aligned_cols=230 Identities=12% Similarity=0.113 Sum_probs=150.1
Q ss_pred eEEEEEcCCC---------ccceEEEecCCEEEEEEEeCC-CCCceEEeccccCCCCCCCCCCcc----c-CCCCCCCCe
Q 009149 47 QRGILINWQF---------PGPDIHSVTNDNLIINVFNSL-DEPFLLSWNGIQNRRNSFEDGVYG----T-TCPIPPGKN 111 (542)
Q Consensus 47 ~~~~~~Ng~~---------pgP~i~v~~Gd~v~i~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~----~-q~~i~pG~~ 111 (542)
...+++||+- +-|.|+|++|+++++|+.|.. .....+|++|..+.. ...||.+. + ...|.||++
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCceE
Confidence 4679999972 347999999999999999986 456789998876543 46899843 2 456999999
Q ss_pred EEEEEEECCCceeeeEecchh---hhhhcceeeEEEEeCCCCCCCCCCCCCC-CeEEEEEeeeccchhh-----------
Q 009149 112 FTYILQVKDQIGSFYYFPSLA---FHKAAGGFGGIRILSRPRIPVPFPDPAG-DYTVLIGDWYKSNHTD----------- 176 (542)
Q Consensus 112 ~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~l~d~~~~~~~~----------- 176 (542)
++..+++.+..|.||.++... .....|...+++.........|...... .. ..+.+..+.....
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHT-KCLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCS-SBCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCc-cccccccccccccccCCCccCCCC
Confidence 999999754569999998742 1122333334554432211111100000 00 0000000000000
Q ss_pred HHHhhccCCCCCCCCeEEEcCCCCC------------------------ceEEEecCcEEEEEEEEcCCCceEEEEEecc
Q 009149 177 LRAHLDKGKKLPLPDGILINGRGSG------------------------AAFNVEQGKTYRLRISNVGLQNSLNFRIQNH 232 (542)
Q Consensus 177 ~~~~~~~~~~~~~~~~~liNG~~~~------------------------~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh 232 (542)
....+.-. ....+..++|||+... ..+.++.|++++|.|.|......|+||+|||
T Consensus 326 ~d~~~~l~-~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh 404 (495)
T 3t6v_A 326 ADCNLNLS-LGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGH 404 (495)
T ss_dssp SSEEEECC-EEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTC
T ss_pred CcEEEEEE-EEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCC
Confidence 00000000 0001236789997521 2478999999999998433445789999999
Q ss_pred eeEEEeecCccc----ceeeeeeEEEcC-CceEEEEEEeCCCCcceEEEEeee
Q 009149 233 KMKLVEVEGTHT----LQTTYSSLDVHV-GQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 233 ~~~via~DG~~~----~p~~~~~l~l~p-geR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
.|+|++.+|... .|..+|++.|.+ |+.+.+.++++ .||.|.+||+..
T Consensus 405 ~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~ 456 (495)
T 3t6v_A 405 DFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHID 456 (495)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCH
T ss_pred cEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecch
Confidence 999999988654 588899999997 99999999998 899999999854
No 57
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.49 E-value=1.2e-12 Score=138.55 Aligned_cols=238 Identities=14% Similarity=0.116 Sum_probs=158.0
Q ss_pred EEEEEEEEEEEecCCCe-------------eeEEEEEcCCCccceEEEecCCEEEEEEEeCC-CCCceEEeccccCCCCC
Q 009149 29 RFFNWNVTYGDIYPLGV-------------RQRGILINWQFPGPDIHSVTNDNLIINVFNSL-DEPFLLSWNGIQNRRNS 94 (542)
Q Consensus 29 ~~~~l~i~~~~~~~~G~-------------~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l-~~~~~iH~HG~~~~~~~ 94 (542)
++| |.++......+|. ....+++||+. .|+|.|++|+ ++|+.|.. .....+|++|..... .
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 455 7776665554443 23578999996 7899999999 99999997 566799999876543 5
Q ss_pred CCCCC----cc-c-CCCCCCCCeEEEEEEECCCceeeeEecchhhhh--------hcceeeEEEEeCCCCCCCC------
Q 009149 95 FEDGV----YG-T-TCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHK--------AAGGFGGIRILSRPRIPVP------ 154 (542)
Q Consensus 95 ~~DGv----~~-~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~--------~~Gl~G~liV~~~~~~~~~------ 154 (542)
..||. |. + ...|.||++++..+++ .+.|+|..-++..... ......-+-+... ....|
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~lP~~l~~~ 333 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE-NVELPKNLKIF 333 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC-CCCCCSCSCCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccccCccccCCCCceeEEEEecCCC-CccCCccccCC
Confidence 68974 33 2 5679999999999996 5678877766532110 0001111222221 11111
Q ss_pred --CCCCCCCeEEEEEeeeccchhhHHHhhccCCCCC----CCCeEEEcCCCC---CceEEEecCcEEEEEEEEcCCCceE
Q 009149 155 --FPDPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLP----LPDGILINGRGS---GAAFNVEQGKTYRLRISNVGLQNSL 225 (542)
Q Consensus 155 --~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~----~~~~~liNG~~~---~~~~~v~~G~~~rlRliNa~~~~~~ 225 (542)
.+..+.+..+.++....+ +. .+....... ....++|||+.. .+.++++.|++++|+|+|.+. ..+
T Consensus 334 ~~~~~~~~~r~~~l~~~~~~----~~-~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~-~~H 407 (481)
T 3zx1_A 334 KPSEEPKEFKEIIMSEDHMQ----MH-GMMGKSEGELKIALASMFLINRKSYDLKRIDLSSKLGVVEDWIVINKSH-MDH 407 (481)
T ss_dssp CCCCCCCEEEEEEEEECCST----TT-TGGGCCHHHHHHHHHTTEEETTBCCCTTCCCEEEETTCCEEEEEEECSS-SCE
T ss_pred CCCCCCCcEEEEEEeccchh----cc-cccccccccccccccceeEECCEeCCCCCceEEeCCCCEEEEEEEcCCC-Cce
Confidence 111122223333221100 00 000000000 012489999974 257999999999999999765 578
Q ss_pred EEEEecceeEEEee--cCcccc---eeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009149 226 NFRIQNHKMKLVEV--EGTHTL---QTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 226 ~~~i~gh~~~via~--DG~~~~---p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
.||||||.|+|++. ||.... +..+|++.|.|||++.|.++++ .+|.|.++|+..
T Consensus 408 p~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG~w~~HCHil 466 (481)
T 3zx1_A 408 PFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKGLRMYHCHIL 466 (481)
T ss_dssp EEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCEEEEEEESSH
T ss_pred eEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCeeEEEEcCCh
Confidence 99999999999999 998763 4679999999999999999997 899999999854
No 58
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.46 E-value=1.9e-12 Score=137.82 Aligned_cols=230 Identities=10% Similarity=0.114 Sum_probs=148.7
Q ss_pred eEEEEEcCCC--------ccceEEEecCCEEEEEEEeCC-CCCceEEeccccCCCCCCCCCCcc----c-CCCCCCCCeE
Q 009149 47 QRGILINWQF--------PGPDIHSVTNDNLIINVFNSL-DEPFLLSWNGIQNRRNSFEDGVYG----T-TCPIPPGKNF 112 (542)
Q Consensus 47 ~~~~~~Ng~~--------pgP~i~v~~Gd~v~i~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~----~-q~~i~pG~~~ 112 (542)
...+++||+- +-|.|+|++|+++++|+.|.. .....+|++|..+.. ...||.+. + ...|.||+++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEE
Confidence 4679999973 347999999999999999987 456789999976544 46899843 2 4569999999
Q ss_pred EEEEEECCCceeeeEecchh--h-hhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccchh-----------hHH
Q 009149 113 TYILQVKDQIGSFYYFPSLA--F-HKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHT-----------DLR 178 (542)
Q Consensus 113 ~Y~f~~~~~~Gt~wYH~H~~--~-q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~-----------~~~ 178 (542)
+..+++.+..|.||..+... . ....|..-+++.........|........ ..+.+..+.... ...
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCc
Confidence 99999755569999998642 1 11222222344443221111110000000 000010000000 000
Q ss_pred HhhccCCCCCCCCeEEEcCCCC------------------------CceEEEecCcEEEEEEEEcC--CCceEEEEEecc
Q 009149 179 AHLDKGKKLPLPDGILINGRGS------------------------GAAFNVEQGKTYRLRISNVG--LQNSLNFRIQNH 232 (542)
Q Consensus 179 ~~~~~~~~~~~~~~~liNG~~~------------------------~~~~~v~~G~~~rlRliNa~--~~~~~~~~i~gh 232 (542)
..+.-. .......++|||+.. ...+.++.|++++|.|.|.+ ....|+||+|||
T Consensus 324 ~~~~l~-~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh 402 (499)
T 3pxl_A 324 KAINMA-FNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGH 402 (499)
T ss_dssp EEEECC-EEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTC
T ss_pred EEEEEE-EEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCC
Confidence 000000 000123578998752 12478999999999999532 235689999999
Q ss_pred eeEEEeecCccc----ceeeeeeEEEcC---CceEEEEEEeCCCCcceEEEEeee
Q 009149 233 KMKLVEVEGTHT----LQTTYSSLDVHV---GQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 233 ~~~via~DG~~~----~p~~~~~l~l~p---geR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
.|+|++.+|... .|...|++.|.+ |+.+.+.++++ +||.|.+||+..
T Consensus 403 ~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~ 456 (499)
T 3pxl_A 403 TFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHID 456 (499)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSH
T ss_pred cEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCCh
Confidence 999999888653 588899999986 99999999998 899999999854
No 59
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.46 E-value=2.5e-13 Score=121.49 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=73.6
Q ss_pred CCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCC------CCccc--CCCCCCCC--eE
Q 009149 43 LGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFED------GVYGT--TCPIPPGK--NF 112 (542)
Q Consensus 43 ~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~D------Gv~~~--q~~i~pG~--~~ 112 (542)
.|.....+.++|. ++|+|+|++||+|+|+++|... ...|.+.+...+..+.+ ..... ...|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 4444445566666 6899999999999999999733 44677666544433322 11111 12789999 99
Q ss_pred EEEEEECCCceeeeEecchhhhhhcceeeEEEEe
Q 009149 113 TYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 146 (542)
Q Consensus 113 ~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (542)
+|.|+ . ++|+||||||...|..+||.|.|+|+
T Consensus 123 t~tft-~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWH-P-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEC-C-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE-E-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99999 5 89999999999889999999999985
No 60
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.46 E-value=6.1e-12 Score=135.35 Aligned_cols=217 Identities=11% Similarity=0.119 Sum_probs=147.3
Q ss_pred eEEEEEcCCCccceEEEecCCEEEEEEEeCC-CCCceEEeccccCCCCCCCCCCcc----c-CCCCCCCCeEEEEEEECC
Q 009149 47 QRGILINWQFPGPDIHSVTNDNLIINVFNSL-DEPFLLSWNGIQNRRNSFEDGVYG----T-TCPIPPGKNFTYILQVKD 120 (542)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~----~-q~~i~pG~~~~Y~f~~~~ 120 (542)
...+++||+. .|+|+|++|+++++|+.|.. .....+|++|..+.. ...||.+. + ...|.||++++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 3578999996 79999999999999999998 456788888875543 46899743 2 566999999999999743
Q ss_pred C-ceeeeEecchhhhhh------cceee-EEEEeCCCC-CCCCC--CC-------------------CCCCeEEEEEeee
Q 009149 121 Q-IGSFYYFPSLAFHKA------AGGFG-GIRILSRPR-IPVPF--PD-------------------PAGDYTVLIGDWY 170 (542)
Q Consensus 121 ~-~Gt~wYH~H~~~q~~------~Gl~G-~liV~~~~~-~~~~~--~~-------------------~~~e~~l~l~d~~ 170 (542)
+ .|.||.......... ....+ +++...... .+.+. .. ...+..+.+.--
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~- 323 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVV- 323 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEE-
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEE-
Confidence 3 578999987542210 01122 233222111 00000 00 000011111000
Q ss_pred ccchhhHHHhhccCCCCCCCCeEEEcCCCC---------------------------CceEEEecCcEEEEEEEEcCCCc
Q 009149 171 KSNHTDLRAHLDKGKKLPLPDGILINGRGS---------------------------GAAFNVEQGKTYRLRISNVGLQN 223 (542)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~liNG~~~---------------------------~~~~~v~~G~~~rlRliNa~~~~ 223 (542)
+.. .......++|||+.. ...+.++.|++++|.|.|.+. .
T Consensus 324 ----------~~~--~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~-~ 390 (534)
T 1zpu_A 324 ----------MDN--LKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDT-G 390 (534)
T ss_dssp ----------EEE--CTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSS-S
T ss_pred ----------eec--cCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCC-C
Confidence 000 001123578888852 125889999999999999876 5
Q ss_pred eEEEEEecceeEEEeecCc-----------c---------cceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009149 224 SLNFRIQNHKMKLVEVEGT-----------H---------TLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 224 ~~~~~i~gh~~~via~DG~-----------~---------~~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
.|+||||||.|+|++.++. + ..|..+|++.+.||+.+.|.|+++ .||.|.+||+..
T Consensus 391 ~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCHi~ 466 (534)
T 1zpu_A 391 THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCHIE 466 (534)
T ss_dssp CEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEECCH
T ss_pred CCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeCch
Confidence 6899999999999998853 1 246789999999999999999998 799999999954
No 61
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.44 E-value=5.1e-13 Score=113.27 Aligned_cols=105 Identities=19% Similarity=0.125 Sum_probs=79.4
Q ss_pred EEEEEEEEEEEe-----cCCCeeeEE-EEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCccc
Q 009149 29 RFFNWNVTYGDI-----YPLGVRQRG-ILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGT 102 (542)
Q Consensus 29 ~~~~l~i~~~~~-----~~~G~~~~~-~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 102 (542)
+.|.+.+.+... ..+|..... ..||++++.+.|++++||+|+++++|.... +||+.... .|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---
Confidence 356666655443 235666555 599999999999999999999999999765 55554331 122
Q ss_pred CCCCCCCCeEEEEEEECCCceeeeEecchhhhhhcceeeEEEEeC
Q 009149 103 TCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILS 147 (542)
Q Consensus 103 q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (542)
+..+.||++++|.|+ ++++|+||||||...+... |.|.|+|++
T Consensus 70 ~~~i~pG~~~~~~f~-~~~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFT-ADKAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEE-CCSCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred eeEeCCCCEEEEEEE-CCCCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 467999999999999 4789999999997654333 999999974
No 62
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.43 E-value=3.8e-12 Score=137.79 Aligned_cols=202 Identities=11% Similarity=0.126 Sum_probs=135.4
Q ss_pred eEEEecCCEEEEEEEeCCC-CCceEEeccccCCCCCCCCCCcc----c-CCCCCCCCeEEEEEEE-CCCceeeeEecchh
Q 009149 60 DIHSVTNDNLIINVFNSLD-EPFLLSWNGIQNRRNSFEDGVYG----T-TCPIPPGKNFTYILQV-KDQIGSFYYFPSLA 132 (542)
Q Consensus 60 ~i~v~~Gd~v~i~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~-q~~i~pG~~~~Y~f~~-~~~~Gt~wYH~H~~ 132 (542)
+|+|++|+++++|+.|... ....+|++|..+.. ...||.+. + ...|.||++++..+++ .+..|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999974 45688998875543 46899743 3 5679999999999996 33489999999864
Q ss_pred h---hhhcceeeEEEEeCCCC--CC---CC-CC--------------------------CCCCCeEEEEEeeeccchhhH
Q 009149 133 F---HKAAGGFGGIRILSRPR--IP---VP-FP--------------------------DPAGDYTVLIGDWYKSNHTDL 177 (542)
Q Consensus 133 ~---q~~~Gl~G~liV~~~~~--~~---~~-~~--------------------------~~~~e~~l~l~d~~~~~~~~~ 177 (542)
. +... ..+.|-...... .+ .+ .. ..++.+.+.+..-..
T Consensus 284 ~~~~~~~~-~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~------ 356 (552)
T 1aoz_A 284 ARHPNTPP-GLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVI------ 356 (552)
T ss_dssp SSCCCSCC-EEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEE------
T ss_pred cCCCCCcc-EEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEeeccC------
Confidence 2 1111 223333332211 00 00 00 001111111110000
Q ss_pred HHhhccCCCCCCCCeEEEcCCCC----------------------------------------------CceEEEecCcE
Q 009149 178 RAHLDKGKKLPLPDGILINGRGS----------------------------------------------GAAFNVEQGKT 211 (542)
Q Consensus 178 ~~~~~~~~~~~~~~~~liNG~~~----------------------------------------------~~~~~v~~G~~ 211 (542)
.....+.|||+.. ...+.++.|++
T Consensus 357 ----------~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~ 426 (552)
T 1aoz_A 357 ----------NGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEV 426 (552)
T ss_dssp ----------TTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCE
T ss_pred ----------CCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCE
Confidence 0001233444310 13478999999
Q ss_pred EEEEEEEcCC-----CceEEEEEecceeEEEeec-Ccc----------cceeeeeeEEEcCCceEEEEEEeCCCCcceEE
Q 009149 212 YRLRISNVGL-----QNSLNFRIQNHKMKLVEVE-GTH----------TLQTTYSSLDVHVGQSYSVLVTADQPARDYYI 275 (542)
Q Consensus 212 ~rlRliNa~~-----~~~~~~~i~gh~~~via~D-G~~----------~~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i 275 (542)
++|.|.|.+. ...|+||||||.|+|++.. |.+ ..|..+|++.|.+|+.+.+.++++ .||.|.+
T Consensus 427 v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~ 505 (552)
T 1aoz_A 427 VDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAF 505 (552)
T ss_dssp EEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEE
T ss_pred EEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEE
Confidence 9999999875 3468999999999999984 553 257789999999999999999998 7999999
Q ss_pred EEeee
Q 009149 276 VVSSR 280 (542)
Q Consensus 276 ~~~~~ 280 (542)
||+..
T Consensus 506 HCHi~ 510 (552)
T 1aoz_A 506 HCHIE 510 (552)
T ss_dssp EESSH
T ss_pred Eeeeh
Confidence 99964
No 63
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.42 E-value=4e-12 Score=137.63 Aligned_cols=231 Identities=8% Similarity=0.025 Sum_probs=146.3
Q ss_pred eEEEEEcCCCc--------cceEEEecCCEEEEEEEeCCC-CCceEEeccccCCCCCCCCCCcc----c-CCCCCCCCeE
Q 009149 47 QRGILINWQFP--------GPDIHSVTNDNLIINVFNSLD-EPFLLSWNGIQNRRNSFEDGVYG----T-TCPIPPGKNF 112 (542)
Q Consensus 47 ~~~~~~Ng~~p--------gP~i~v~~Gd~v~i~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~-q~~i~pG~~~ 112 (542)
...+++||+.. -|+|+|++|+++++|+.|... ....+|++|..+.. ...||.+. + ...|.||+++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 45789999963 379999999999999999984 46789999976543 46899853 3 5679999999
Q ss_pred EEEEEECCCceeeeEecch--hhh---hhcc-eeeEEEEeCCCCCCCCCCC----CC----CCeEE-EEEeeec-cch--
Q 009149 113 TYILQVKDQIGSFYYFPSL--AFH---KAAG-GFGGIRILSRPRIPVPFPD----PA----GDYTV-LIGDWYK-SNH-- 174 (542)
Q Consensus 113 ~Y~f~~~~~~Gt~wYH~H~--~~q---~~~G-l~G~liV~~~~~~~~~~~~----~~----~e~~l-~l~d~~~-~~~-- 174 (542)
+..+++.+..|.||..... ... .... ..+.|-..... ...|... .+ .+..+ -+..... ...
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~-~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~ 352 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP-GGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFV 352 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSC-CSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCC-CCCCCCCCCcCCCcccccccccccCCCCCCCCcccc
Confidence 9999975557999998775 211 0111 12333333221 1111100 00 00000 0000000 000
Q ss_pred hhHHHh--hccCCCCCCCCeEEEcCCCCC-----c-----------------eEEEecCcEEEEEEEEcCC----CceEE
Q 009149 175 TDLRAH--LDKGKKLPLPDGILINGRGSG-----A-----------------AFNVEQGKTYRLRISNVGL----QNSLN 226 (542)
Q Consensus 175 ~~~~~~--~~~~~~~~~~~~~liNG~~~~-----~-----------------~~~v~~G~~~rlRliNa~~----~~~~~ 226 (542)
...... +...........++|||+... | .+.+..++.+++.++|... ...|+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP 432 (559)
T 2q9o_A 353 KRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHP 432 (559)
T ss_dssp CCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEE
T ss_pred cceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCc
Confidence 000000 000000112347889998631 2 2677777777777777644 56889
Q ss_pred EEEecceeEEEeecC---------ccc------------ceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009149 227 FRIQNHKMKLVEVEG---------THT------------LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 227 ~~i~gh~~~via~DG---------~~~------------~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
||||||.|+|++.++ ... .|..+|++.|.+|+++.+.|+++ .||.|.+||+..
T Consensus 433 ~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil 506 (559)
T 2q9o_A 433 MHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIA 506 (559)
T ss_dssp EEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCH
T ss_pred EEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecch
Confidence 999999999999986 321 46789999999999999999988 799999999964
No 64
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.38 E-value=7.6e-12 Score=132.32 Aligned_cols=246 Identities=16% Similarity=0.125 Sum_probs=154.5
Q ss_pred EEEEEEEEEEEecCCCe--------------eeEEEEEcCCCccceEEEecCCEEEEEEEeCC-CCCceEEe-ccccCCC
Q 009149 29 RFFNWNVTYGDIYPLGV--------------RQRGILINWQFPGPDIHSVTNDNLIINVFNSL-DEPFLLSW-NGIQNRR 92 (542)
Q Consensus 29 ~~~~l~i~~~~~~~~G~--------------~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l-~~~~~iH~-HG~~~~~ 92 (542)
.++.|.+++-....+|. ....+++||+. .|.+.+ +|+++++|+.|.. .....+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 46677777655544432 23578999995 688876 6789999999997 45567887 5754332
Q ss_pred CCCCCCCc----c-c-CCCCCCCCeEEEEEEECCCceeeeEecchhhhh------hcceeeEEEEeC---CCCCCCCC--
Q 009149 93 NSFEDGVY----G-T-TCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHK------AAGGFGGIRILS---RPRIPVPF-- 155 (542)
Q Consensus 93 ~~~~DGv~----~-~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~------~~Gl~G~liV~~---~~~~~~~~-- 155 (542)
...||.+ . + ...|.|||+++..+++. +.+.|+.-+...... .+.-.-.+-|.+ +.....|.
T Consensus 229 -Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 229 -IASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp -EEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred -EEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 4689953 2 3 56799999999999974 577777765421110 001011222221 01111111
Q ss_pred ---C---C--C--CCCeEEEEEeeeccc--hhhHHHhhc----cCC----------CC-C----------CCCeEEEcCC
Q 009149 156 ---P---D--P--AGDYTVLIGDWYKSN--HTDLRAHLD----KGK----------KL-P----------LPDGILINGR 198 (542)
Q Consensus 156 ---~---~--~--~~e~~l~l~d~~~~~--~~~~~~~~~----~~~----------~~-~----------~~~~~liNG~ 198 (542)
+ . . .+++.+.+... .+. ...+.+... .+. .+ . ....++|||+
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~ 385 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPM-LDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQ 385 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHH-HHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTB
T ss_pred ccCCCCcccccccceEEEEEeccc-ccccccccccccccccccccccccccccccccCccccccccccccccceeeECCe
Confidence 0 0 0 12222332110 000 000000000 000 00 0 0124799999
Q ss_pred CC---CceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccce---eeeeeEEEcCCceEEEEEEeCC---C
Q 009149 199 GS---GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQ---TTYSSLDVHVGQSYSVLVTADQ---P 269 (542)
Q Consensus 199 ~~---~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p---~~~~~l~l~pgeR~dv~v~~~~---~ 269 (542)
.. .+.++++.|+++||+|+|.+....+.|||||+.|+|++.||....+ ..+|+|.|. |++..|+|+|++ .
T Consensus 386 ~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~ 464 (488)
T 3od3_A 386 AFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPK 464 (488)
T ss_dssp CCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCG
T ss_pred eCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCC
Confidence 73 3668999999999999999976788999999999999999987754 468999999 999999999974 3
Q ss_pred CcceEEEEeee
Q 009149 270 ARDYYIVVSSR 280 (542)
Q Consensus 270 ~g~y~i~~~~~ 280 (542)
+|.|.++|+..
T Consensus 465 ~G~~m~HCH~l 475 (488)
T 3od3_A 465 EHAYMAHCHLL 475 (488)
T ss_dssp GGCEEEEESSH
T ss_pred CCCEEEeCCch
Confidence 57999999854
No 65
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.38 E-value=1.4e-12 Score=132.54 Aligned_cols=104 Identities=16% Similarity=0.221 Sum_probs=84.9
Q ss_pred EEEcCCC--ccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCc-------c-c-CCCCCCCCeEEEEEEE
Q 009149 50 ILINWQF--PGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVY-------G-T-TCPIPPGKNFTYILQV 118 (542)
Q Consensus 50 ~~~Ng~~--pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~-~-q~~i~pG~~~~Y~f~~ 118 (542)
|+|||+. ..|.|++++||+|++++.|.....+.+|+||...... .+|.. . . ...|.||++++|.|+.
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 4789999999999999999998999999999864331 23431 1 1 3469999999999995
Q ss_pred --CCCceeeeEecchhhhhhcceeeEEEEeCCCCCCCCC
Q 009149 119 --KDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPF 155 (542)
Q Consensus 119 --~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~ 155 (542)
++.+|+|+||||...+...||.|.++|.+++.....|
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~~P~y 314 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGY 314 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSCCSCC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCCCCCC
Confidence 3679999999999999999999999999866544444
No 66
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.37 E-value=1.9e-11 Score=128.80 Aligned_cols=225 Identities=11% Similarity=0.082 Sum_probs=150.3
Q ss_pred EEEEEEEEEEEecC-------------CCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCC-CCceEEe--cc---cc
Q 009149 29 RFFNWNVTYGDIYP-------------LGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLD-EPFLLSW--NG---IQ 89 (542)
Q Consensus 29 ~~~~l~i~~~~~~~-------------~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-~~~~iH~--HG---~~ 89 (542)
+++.|.+++-.... .|.....+++||+. .|+|+|++| ++++|+.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56777776654432 12234578999995 799999999 99999999984 5678999 77 43
Q ss_pred CCCCCCCCCCc----c-c-CCCCCCCCeEEEEEEECCCceeeeEecchhhhhhc---c----------eeeEE--EEeCC
Q 009149 90 NRRNSFEDGVY----G-T-TCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAA---G----------GFGGI--RILSR 148 (542)
Q Consensus 90 ~~~~~~~DGv~----~-~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~---G----------l~G~l--iV~~~ 148 (542)
... ...||.+ . + ...|.||++++..++++ .|.||..++....... + ....+ .+.+.
T Consensus 216 ~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRL-IAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEE-EEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 332 4689974 2 2 45699999999999974 4789998774211000 0 11112 22121
Q ss_pred CCCCCC--C---C----CCCCCeEEEEEeeeccchhhHHHhhccCCCCCCCCeEEEcCCCC---CceEE-EecCcEEEEE
Q 009149 149 PRIPVP--F---P----DPAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGS---GAAFN-VEQGKTYRLR 215 (542)
Q Consensus 149 ~~~~~~--~---~----~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~---~~~~~-v~~G~~~rlR 215 (542)
...+.| . + ....+..+.|. .+ ...++|||+.. .+.+. ++.|++++|+
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~---------------~~-----~~~~~iNg~~~~~~~p~~~~~~~g~~v~~~ 352 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALS---------------LS-----GMQWTINGMFWNASNPLFEHVSVEGVELWE 352 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEE---------------EE-----TTEEEETTBCCCTTCTTCCCEEECEEEEEE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEe---------------CC-----CceeeECCCcCCCCCCceeccCCCCeEEEE
Confidence 110000 0 0 00001111111 00 12589999973 24567 9999999999
Q ss_pred EEEcCCCceEEEEEecceeEEEeecCccc------------ce---eeeeeEEEcCCceEEEEEEeC---C-CCcceEEE
Q 009149 216 ISNVGLQNSLNFRIQNHKMKLVEVEGTHT------------LQ---TTYSSLDVHVGQSYSVLVTAD---Q-PARDYYIV 276 (542)
Q Consensus 216 liNa~~~~~~~~~i~gh~~~via~DG~~~------------~p---~~~~~l~l~pgeR~dv~v~~~---~-~~g~y~i~ 276 (542)
|.|.+....|+||||||.|+|++.+|... .| ..+|++.+.||+.+.+.++|. . .| |.++
T Consensus 353 i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~H 430 (448)
T 3aw5_A 353 IVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFH 430 (448)
T ss_dssp EEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEE
T ss_pred EEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEE
Confidence 99998446789999999999999999764 23 479999999999999997774 2 45 9999
Q ss_pred Eeee
Q 009149 277 VSSR 280 (542)
Q Consensus 277 ~~~~ 280 (542)
|+..
T Consensus 431 CHil 434 (448)
T 3aw5_A 431 CHNL 434 (448)
T ss_dssp ESSH
T ss_pred cCCh
Confidence 9854
No 67
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.30 E-value=6.1e-12 Score=134.60 Aligned_cols=94 Identities=17% Similarity=0.151 Sum_probs=75.0
Q ss_pred CCeeeEEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCc
Q 009149 43 LGVRQRGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQI 122 (542)
Q Consensus 43 ~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~ 122 (542)
++....+|++|++|++|+|++++||+|+++++|.+...-. +||+.+.. .|+ +..+.||++++|.|++ +++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSC
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCC
Confidence 4577889999999999999999999999999998653211 36664432 233 3679999999999995 799
Q ss_pred eeeeEecch--h-hhhhcceeeEEEEeCC
Q 009149 123 GSFYYFPSL--A-FHKAAGGFGGIRILSR 148 (542)
Q Consensus 123 Gt~wYH~H~--~-~q~~~Gl~G~liV~~~ 148 (542)
|+||||||. + .| .||.|.|+|+++
T Consensus 567 GtY~yhC~e~Cg~~H--~gM~G~IiV~p~ 593 (595)
T 1fwx_A 567 GVYWYYCQWFCHALH--MEMRGRMLVEPK 593 (595)
T ss_dssp EEEEEECCSCCSTTC--TTCEEEEEEECC
T ss_pred EEEEEECCCCCCCCc--cCCEEEEEEEcC
Confidence 999999993 2 33 399999999975
No 68
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.28 E-value=1.9e-10 Score=124.73 Aligned_cols=229 Identities=10% Similarity=0.026 Sum_probs=144.0
Q ss_pred EEEEEcCCCccceEEEecCCEEEEEEEeCC-CCCceEEeccc-------cCCCCCCCCCCcc----c-C-------CCCC
Q 009149 48 RGILINWQFPGPDIHSVTNDNLIINVFNSL-DEPFLLSWNGI-------QNRRNSFEDGVYG----T-T-------CPIP 107 (542)
Q Consensus 48 ~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l-~~~~~iH~HG~-------~~~~~~~~DGv~~----~-q-------~~i~ 107 (542)
..+++||+. .|.+.|++| ++++|+.|.. .....+++.|. .+. -...||.+. . + ..|.
T Consensus 255 d~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~-vIa~DG~~l~~P~~~~~~~~~~~l~l~ 331 (612)
T 2g23_A 255 PYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVLSAA 331 (612)
T ss_dssp SEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSEEEC
T ss_pred CEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE-EEEeCCeEccCCEEecccCcccEEEEC
Confidence 568999995 799999999 9999999998 45678888664 111 135899743 2 3 3589
Q ss_pred CCCeEEEEEEECCCce-eeeEecchhhhh------h----cceeeEEEEeCCC-CC--CCCCC------CCCCC-----e
Q 009149 108 PGKNFTYILQVKDQIG-SFYYFPSLAFHK------A----AGGFGGIRILSRP-RI--PVPFP------DPAGD-----Y 162 (542)
Q Consensus 108 pG~~~~Y~f~~~~~~G-t~wYH~H~~~q~------~----~Gl~G~liV~~~~-~~--~~~~~------~~~~e-----~ 162 (542)
|||+++.-+++.+.+| +++...-..... . .+..--|.|..+. .+ ..|-. ....+ .
T Consensus 332 pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~r 411 (612)
T 2g23_A 332 PAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHR 411 (612)
T ss_dssp TTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEE
T ss_pred CcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCccccccee
Confidence 9999999999755466 466665431110 0 1122224554432 11 11110 00001 1
Q ss_pred EEEEE------------eeeccc---hhhHH---H-hhccCCCCCCCCeEEEcCCC--CCceEEEecCcEEEEEEEEcCC
Q 009149 163 TVLIG------------DWYKSN---HTDLR---A-HLDKGKKLPLPDGILINGRG--SGAAFNVEQGKTYRLRISNVGL 221 (542)
Q Consensus 163 ~l~l~------------d~~~~~---~~~~~---~-~~~~~~~~~~~~~~liNG~~--~~~~~~v~~G~~~rlRliNa~~ 221 (542)
.+.+. -|.... ...+. . .+...........++|||+. ..+.++++.|++++|+|+|.+.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~~~~~~v~~G~~v~w~l~N~~~ 491 (612)
T 2g23_A 412 LIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFNDGLGFTIGEGTHEQWTFLNLSP 491 (612)
T ss_dssp EEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTSCCCEEEETTCEEEEEEEECSS
T ss_pred EEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCCCCceEecCCCEEEEEEEeCCC
Confidence 12221 011000 00000 0 00000000112368899995 3478999999999999999985
Q ss_pred CceEEEEEecceeEEEeecCc------------------------cc---ceeeeeeEEEcCCceEEEEEEeCCCCcceE
Q 009149 222 QNSLNFRIQNHKMKLVEVEGT------------------------HT---LQTTYSSLDVHVGQSYSVLVTADQPARDYY 274 (542)
Q Consensus 222 ~~~~~~~i~gh~~~via~DG~------------------------~~---~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~ 274 (542)
..|.||||+|.|+|++.+|. +. ++..+|++.|.||+++.|.++++..+|.|.
T Consensus 492 -~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~ 570 (612)
T 2g23_A 492 -ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFM 570 (612)
T ss_dssp -SCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEE
T ss_pred -CCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEE
Confidence 57899999999999987542 11 123689999999999999999986799999
Q ss_pred EEEeee
Q 009149 275 IVVSSR 280 (542)
Q Consensus 275 i~~~~~ 280 (542)
++|+..
T Consensus 571 ~HCHil 576 (612)
T 2g23_A 571 YHCHLL 576 (612)
T ss_dssp EEESSH
T ss_pred EEeCch
Confidence 999864
No 69
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.24 E-value=8.4e-11 Score=126.09 Aligned_cols=215 Identities=12% Similarity=0.054 Sum_probs=138.8
Q ss_pred eEEEEEcCCCccceEEEecCCEEEEEEEeCCC-CCceEEeccc-cCCCCCCCCCCc----c-c-CCCCCCCCeEEEEEEE
Q 009149 47 QRGILINWQFPGPDIHSVTNDNLIINVFNSLD-EPFLLSWNGI-QNRRNSFEDGVY----G-T-TCPIPPGKNFTYILQV 118 (542)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-~~~~iH~HG~-~~~~~~~~DGv~----~-~-q~~i~pG~~~~Y~f~~ 118 (542)
...+++||+. .|.|.++.| ++++|+.|... ....+|+.|. .+.. ...||.+ . + ...|.||++++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQ-IGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEE-EccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 3578999996 799999885 99999999984 4578999876 3332 4689953 2 2 4669999999999997
Q ss_pred CCCceeeeE-ecchh--hhhhcce-eeEEEEeCCCC------CCCCCCCC----------CCCeEEEEEeeeccchhhHH
Q 009149 119 KDQIGSFYY-FPSLA--FHKAAGG-FGGIRILSRPR------IPVPFPDP----------AGDYTVLIGDWYKSNHTDLR 178 (542)
Q Consensus 119 ~~~~Gt~wY-H~H~~--~q~~~Gl-~G~liV~~~~~------~~~~~~~~----------~~e~~l~l~d~~~~~~~~~~ 178 (542)
.+.+|.++. ..-.. .....+. ...+-+..... ...|.... ..+..+.+...
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~--------- 377 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT--------- 377 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE---------
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee---------
Confidence 544676322 21110 0000001 12222322110 00110000 00011111110
Q ss_pred HhhccCCCCCCCCeEEEcCCCC--CceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcc-------------
Q 009149 179 AHLDKGKKLPLPDGILINGRGS--GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTH------------- 243 (542)
Q Consensus 179 ~~~~~~~~~~~~~~~liNG~~~--~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~------------- 243 (542)
........++|||+.. ...+.++.|++++|.|.|.+. ..|.||||||.|+|++.++..
T Consensus 378 ------~~~~g~~~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~-~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~ 450 (513)
T 2wsd_A 378 ------QDEYGRPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTR-GTHPIHLHLVSFRVLDRRPFDIARYQESGELSYT 450 (513)
T ss_dssp ------ECTTSCEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBS
T ss_pred ------cCCCCCceEeECCccCCCcccEecCCCCEEEEEEEcCCC-CCcCEeEeCceEEEEEecCccccccccccccccc
Confidence 0001112568999973 245688999999999999986 478999999999999987621
Q ss_pred --------cceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009149 244 --------TLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 244 --------~~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
-++..+|++.|.||+.+.|++++++.+|.|.++|+..
T Consensus 451 ~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil 495 (513)
T 2wsd_A 451 GPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHAL 495 (513)
T ss_dssp SCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred CCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCCh
Confidence 0234789999999999999999965799999999964
No 70
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.24 E-value=6.8e-11 Score=127.03 Aligned_cols=219 Identities=14% Similarity=0.026 Sum_probs=139.0
Q ss_pred eEEEEEcCCCccceEEEecCCEEEEEEEeCCC-CCceEEecc-------ccCCCCCCCCCC----cc-c-CCCCCCCCeE
Q 009149 47 QRGILINWQFPGPDIHSVTNDNLIINVFNSLD-EPFLLSWNG-------IQNRRNSFEDGV----YG-T-TCPIPPGKNF 112 (542)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~-~~~~iH~HG-------~~~~~~~~~DGv----~~-~-q~~i~pG~~~ 112 (542)
...+++||+. .|.|.|+.| ++++|+.|... ....++++| ..+.. ...||. |. + ...|.||+++
T Consensus 201 gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~v-Ia~DG~~~~~P~~~~~l~l~pgeR~ 277 (534)
T 3abg_A 201 GDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKV-IASDSGLLEHPADTSLLYISMAERY 277 (534)
T ss_dssp CSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEEE-EEETTEEEEEEEEESCEEECTTCEE
T ss_pred CceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEEE-EEeCCCcccCceEeceEEECCccEE
Confidence 4578999994 899999985 99999999984 456889876 22221 458985 33 3 5679999999
Q ss_pred EEEEEECCCce-eeeEecchhh--------hhhcceeeEEEEeCCCCC------CCCCCCCCCCeEEEEEeeeccchhhH
Q 009149 113 TYILQVKDQIG-SFYYFPSLAF--------HKAAGGFGGIRILSRPRI------PVPFPDPAGDYTVLIGDWYKSNHTDL 177 (542)
Q Consensus 113 ~Y~f~~~~~~G-t~wYH~H~~~--------q~~~Gl~G~liV~~~~~~------~~~~~~~~~e~~l~l~d~~~~~~~~~ 177 (542)
+..+++.+.+| +||....... +.. ...+.+-+...... ..|......+. .......
T Consensus 278 dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~-~~~~il~~~~~~~~~~~~~~~~P~~L~~~~~--------p~~~~~~ 348 (534)
T 3abg_A 278 EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYD-NTDKVMRFVVADDTTQPDTSVVPANLRDVPF--------PSPTTNT 348 (534)
T ss_dssp EEEEECSSCTTSEEEEECCCCSSSSCCSCSSST-TTSEEEEEECCCCSSCSCCCCCCCCCCCCSC--------CCCCCCC
T ss_pred EEEEEcCCCCCceEEEEeccccccccccccCcC-CcceeEEEecCCCCcCCCCCCCccccccCCC--------CCCcccc
Confidence 99999754467 5887653210 000 01122222221110 01110000000 0000000
Q ss_pred HHhhccCCCCCCCCeEEEcCCCCC----c-eEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEee-cCc---cc---c
Q 009149 178 RAHLDKGKKLPLPDGILINGRGSG----A-AFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEV-EGT---HT---L 245 (542)
Q Consensus 178 ~~~~~~~~~~~~~~~~liNG~~~~----~-~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~-DG~---~~---~ 245 (542)
...+.- ......++|||+... + .+.++.|++++|.|.|.+....|.||||||.|+|++. +|. .. +
T Consensus 349 ~~~~~~---~~~~~~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~ 425 (534)
T 3abg_A 349 PRQFRF---GRTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYE 425 (534)
T ss_dssp CEEEEC---SCCCSTTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGG
T ss_pred ceEEEE---eccCceeEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccc
Confidence 000000 011235689999731 2 4679999999999999986667899999999999998 663 11 1
Q ss_pred eeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009149 246 QTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 246 p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
...+|++.|.||+++.|.+.+.+.+|.|.+||+..
T Consensus 426 ~~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil 460 (534)
T 3abg_A 426 SGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNL 460 (534)
T ss_dssp GSCBSEECCCSSEEEEEEEECCSCCEEEEEEESCH
T ss_pred cCCcCeEEcCCCCEEEEEEEECCCCccEEEecChH
Confidence 24689999999999999998444899999999964
No 71
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.22 E-value=5.1e-11 Score=99.54 Aligned_cols=78 Identities=12% Similarity=0.142 Sum_probs=62.7
Q ss_pred cCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCccc-CCCCCCCCeEEEEEEECCCceeeeEecch
Q 009149 53 NWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGT-TCPIPPGKNFTYILQVKDQIGSFYYFPSL 131 (542)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~ 131 (542)
+..|..+.|++++||+|+ ++|.....+++|+++. .||.... +..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~--~~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEE--EEECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 445667899999999965 5699888899998852 3566544 66799999999988 379999999987
Q ss_pred hhhhhcceeeEEEEe
Q 009149 132 AFHKAAGGFGGIRIL 146 (542)
Q Consensus 132 ~~q~~~Gl~G~liV~ 146 (542)
+. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 54 999999985
No 72
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.18 E-value=2.7e-11 Score=106.67 Aligned_cols=94 Identities=11% Similarity=-0.006 Sum_probs=72.3
Q ss_pred EEeccCCcEEEEEEEcCCCC-CCCeeecCcceEEE-------eecC--CCCCCcCCCCCCCCCCCcceEEEeCCCCEEEE
Q 009149 412 VMGADYRAFIEIVFQNDEDI-IQSYHLNGYQFWVV-------GMDG--GQWTSASRNQYNLRDAVARVTVQVYPKSWSAI 481 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~~F~Vl-------~~~~--g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~i 481 (542)
.+.++.|++|+|+|.|.+.. .|.||+|+....+. .... ..+.+.. ....++||..|.|++...|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~------~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD------KSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC------CTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcc------cccccccccccCCCCEEEE
Confidence 36789999999999999888 89999998643111 0100 0111100 1235789999999999999
Q ss_pred EEEecCceeeEEEeechhhhhcceEEEEEEe
Q 009149 482 YIALDNVGMWNLRSESWARQYLGQQFYLRVY 512 (542)
Q Consensus 482 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 512 (542)
.|.+++||.|.||||+..|.. ||+..+.|.
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999999999 999999883
No 73
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.17 E-value=1.2e-09 Score=117.85 Aligned_cols=226 Identities=12% Similarity=0.045 Sum_probs=143.0
Q ss_pred eEEEEEcCCCc----------------cceEEEecCCEEEEEEEeCCC-CCceEEeccccCCCCCCCCCCcc----c-CC
Q 009149 47 QRGILINWQFP----------------GPDIHSVTNDNLIINVFNSLD-EPFLLSWNGIQNRRNSFEDGVYG----T-TC 104 (542)
Q Consensus 47 ~~~~~~Ng~~p----------------gP~i~v~~Gd~v~i~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~-q~ 104 (542)
...+++||+.. .++|+|++|+++++|+.|... ....+|++|..+.. ...||.+. + ..
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEE
Confidence 34688999742 379999999999999999984 45689999976554 46899853 2 45
Q ss_pred CCCCCCeEEEEEEECCCceeeeEecchhh-----hhhcceeeEEEEeCCCCCCCCCCCCCCCeEEEEEeeeccc-hhhHH
Q 009149 105 PIPPGKNFTYILQVKDQIGSFYYFPSLAF-----HKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSN-HTDLR 178 (542)
Q Consensus 105 ~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~-----q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~-~~~~~ 178 (542)
.|.||++++..+++.+..|.||....... +.. +..-+++.........|... ..+.. +-..+. ...+.
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~-~~~~aiL~Y~~~~~~~P~~~-~~~~~----~~~~~~~~~~L~ 377 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEA-ANATGILRYDSSSIANPTSV-GTTPR----GTCEDEPVASLV 377 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTG-GGCEEEEESSTTCCCCCCCC-CCCCC----CCSCCSCGGGCC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCC-CceEEEEEECCCCCCCCCCC-CCCcc----chhhcccccccc
Confidence 69999999999997656899999987531 111 12223334432211111100 00000 000000 00000
Q ss_pred HhhccC------------CCCCCCCeEEEcCCCC-----Cc-----------------eEEE----ecCcEEEEEEEEcC
Q 009149 179 AHLDKG------------KKLPLPDGILINGRGS-----GA-----------------AFNV----EQGKTYRLRISNVG 220 (542)
Q Consensus 179 ~~~~~~------------~~~~~~~~~liNG~~~-----~~-----------------~~~v----~~G~~~rlRliNa~ 220 (542)
...... ........+.|||... .| .+.+ +.|+++.|.|-|.+
T Consensus 378 P~~~~~~~~~~~~~~~l~~~~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~ 457 (580)
T 3sqr_A 378 PHLALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLT 457 (580)
T ss_dssp BSSCCBCCSEEEEEEEEEEEESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECS
T ss_pred cCCCCCCCCccceEEEEEeccCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCC
Confidence 000000 0001112456777642 01 1334 35999999999987
Q ss_pred C-CceEEEEEecceeEEEeecCc------------ccceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009149 221 L-QNSLNFRIQNHKMKLVEVEGT------------HTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 221 ~-~~~~~~~i~gh~~~via~DG~------------~~~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
. ...|+||+|||.|+|++.+.. +..|..+|++.+.||+.+.+.++++ +||.|.+||+..
T Consensus 458 ~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~ 529 (580)
T 3sqr_A 458 GFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIA 529 (580)
T ss_dssp SSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSH
T ss_pred ccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcH
Confidence 1 257899999999999998532 2247889999999999999999998 899999999854
No 74
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.13 E-value=4.8e-11 Score=99.65 Aligned_cols=85 Identities=9% Similarity=-0.007 Sum_probs=66.5
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEe-cCcee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIAL-DNVGM 490 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~a-dnpG~ 490 (542)
.+.++.|++|+| .|.+...|+||+||..|... .|. +. +....++..+.||+...++|.+ +.||.
T Consensus 20 ~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~-~~---------~~~~~~~~~i~pG~~~~~~f~~~~~~G~ 84 (105)
T 3cvb_A 20 NVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKE-LA---------DKLSHSQLMFSPGESYEITFSSDFPAGT 84 (105)
T ss_dssp EEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHH-HH---------HHHCEEEEECSTTCEEEEEECTTSCSEE
T ss_pred EEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---ccc-cc---------ccccccccccCCCCeEEEEEecCCCCee
Confidence 468899999876 58878899999999766431 000 00 0112588999999999999998 79999
Q ss_pred eEEEeechhhhhcceEEEEEEec
Q 009149 491 WNLRSESWARQYLGQQFYLRVYT 513 (542)
Q Consensus 491 w~~HCHil~H~d~GMm~~~~V~~ 513 (542)
|.|||| .|...||+..+.|.+
T Consensus 85 y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 85 YTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp EEEECT--TTGGGTCEEEEEECC
T ss_pred EEEEeC--CchhcCCEEEEEEcC
Confidence 999999 699999999999853
No 75
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.09 E-value=2.3e-10 Score=95.63 Aligned_cols=83 Identities=14% Similarity=0.274 Sum_probs=62.9
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCc----cc-CCCCCCCCeEEEEEEECCCceeeeEecchh
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVY----GT-TCPIPPGKNFTYILQVKDQIGSFYYFPSLA 132 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~----~~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~ 132 (542)
-+.|++++||+|++ +|.....+++|+|+...+ ..+|.. .. ...+.||++++|.|++++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 47899999999754 588777889998875332 123320 01 2458999999999984368999999999
Q ss_pred hhhhcceeeEEEEeC
Q 009149 133 FHKAAGGFGGIRILS 147 (542)
Q Consensus 133 ~q~~~Gl~G~liV~~ 147 (542)
.|...||.|.|+|++
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 677889999999974
No 76
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.03 E-value=4.4e-10 Score=112.73 Aligned_cols=93 Identities=11% Similarity=0.104 Sum_probs=75.5
Q ss_pred ceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCccc---ceeeeeeEEEcCCceEEEEEEeCC--CCcceEEE
Q 009149 202 AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHT---LQTTYSSLDVHVGQSYSVLVTADQ--PARDYYIV 276 (542)
Q Consensus 202 ~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~---~p~~~~~l~l~pgeR~dv~v~~~~--~~g~y~i~ 276 (542)
+.++++.|++|||||+|++. ..+.|||+||.|+|++.||... .+..+|++.|.||||++++|.+.+ .||.|.++
T Consensus 174 ~~l~v~~Ge~vr~~liN~g~-~~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~H 252 (313)
T 3tas_A 174 PDFEATVGDRVEFVMITHGE-YYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYH 252 (313)
T ss_dssp CCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred cccccccCCEEEEEEecccc-cceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEE
Confidence 56899999999999999996 5789999999999999998876 367899999999999999998764 58999999
Q ss_pred EeeeecCCccceEEEEEecC
Q 009149 277 VSSRFTSTVLTTTGILHYSN 296 (542)
Q Consensus 277 ~~~~~~~~~~~~~ail~y~~ 296 (542)
|+...- ......+++.++.
T Consensus 253 CHi~~H-~~~GM~~~f~V~~ 271 (313)
T 3tas_A 253 CHVQSH-SDMGMVGLFLVKK 271 (313)
T ss_dssp ECSHHH-HHTTCEEEEEEEC
T ss_pred eCChHH-HHCCCeEEEEEEC
Confidence 985421 1123445666653
No 77
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.98 E-value=1.4e-08 Score=111.38 Aligned_cols=89 Identities=11% Similarity=0.068 Sum_probs=73.6
Q ss_pred CeEEEcCCCC--CceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCccc------------------------
Q 009149 191 DGILINGRGS--GAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHT------------------------ 244 (542)
Q Consensus 191 ~~~liNG~~~--~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~------------------------ 244 (542)
..+.+||+.. ...+.++.|++++|.|.|.+.. .|.||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (612)
T 3gyr_A 459 KTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEEECSTTSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred ccccccCccCCCCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCc
Confidence 4677888863 3568899999999999999874 679999999999998876422
Q ss_pred ---ceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009149 245 ---LQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 245 ---~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
++..+|++.+.+|+.+.|.+++.+.+|.|.++|+..
T Consensus 538 ~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp CTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred ccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCCh
Confidence 122479999999999999999765899999999965
No 78
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.97 E-value=2.4e-09 Score=106.57 Aligned_cols=100 Identities=12% Similarity=0.100 Sum_probs=78.2
Q ss_pred EEEcCCCc--cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcc-------c-CCCCCCCCeEEEEEEE-
Q 009149 50 ILINWQFP--GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYG-------T-TCPIPPGKNFTYILQV- 118 (542)
Q Consensus 50 ~~~Ng~~p--gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-------~-q~~i~pG~~~~Y~f~~- 118 (542)
|.+||+.- -|.++++.||+|++++.|......++|+||..... ...++... . ...|.||+++++.+..
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v-~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHGSNFHTFHLHGHRWLD-NRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEESSCCCEEEETTCCEES-SSSSSCCSTTCCCCEESEEECCTTCEEEEEEETT
T ss_pred eeecCccccccccceecCCCEEEEEEEeccccceeeeEecceEEE-EecccccCCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 56677643 47899999999999999999889999999975432 11222211 1 2348999999999873
Q ss_pred -CCCceeeeEecchhhhhhcceeeEEEEeCCCC
Q 009149 119 -KDQIGSFYYFPSLAFHKAAGGFGGIRILSRPR 150 (542)
Q Consensus 119 -~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (542)
++.+|+|+||||...+...||.|.|.|++.+.
T Consensus 258 ~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 258 EGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 23589999999999999999999999998654
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.97 E-value=2.5e-09 Score=94.05 Aligned_cols=90 Identities=9% Similarity=0.013 Sum_probs=67.1
Q ss_pred CCccceEEEecCCEEEEEEEeCCCC-CceEEeccccCC------------C---CCCCCCCc-cc--CCCCCCCCeEEEE
Q 009149 55 QFPGPDIHSVTNDNLIINVFNSLDE-PFLLSWNGIQNR------------R---NSFEDGVY-GT--TCPIPPGKNFTYI 115 (542)
Q Consensus 55 ~~pgP~i~v~~Gd~v~i~v~N~l~~-~~~iH~HG~~~~------------~---~~~~DGv~-~~--q~~i~pG~~~~Y~ 115 (542)
+|--+.|+|++||+|+++++|.... .++++.|+.... + ...-++.+ .+ ...|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4545789999999999999999776 888888864210 0 00001111 11 2448999999999
Q ss_pred EEECCCceeeeEecchhhhhhcceeeEEEEe
Q 009149 116 LQVKDQIGSFYYFPSLAFHKAAGGFGGIRIL 146 (542)
Q Consensus 116 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (542)
|++ +++|+||||||...|.. ||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 995 68999999999988888 999999984
No 80
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.88 E-value=1.7e-08 Score=88.70 Aligned_cols=91 Identities=16% Similarity=0.160 Sum_probs=66.7
Q ss_pred CccceEEEecCCEEEEEEEe--CCCCCceEEeccc------------cCC----CCCCCCCCccc--CCCCCCCCeEEEE
Q 009149 56 FPGPDIHSVTNDNLIINVFN--SLDEPFLLSWNGI------------QNR----RNSFEDGVYGT--TCPIPPGKNFTYI 115 (542)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~v~N--~l~~~~~iH~HG~------------~~~----~~~~~DGv~~~--q~~i~pG~~~~Y~ 115 (542)
|--+.|+|+.||+|+++++| .....++++.+.. ... .-+..|..... ...|.||++.++.
T Consensus 30 F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 30 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 43478999999999999999 6667788887631 000 00000111111 2458999999999
Q ss_pred EEECCCceeeeEecchhhhhhcceeeEEEEeC
Q 009149 116 LQVKDQIGSFYYFPSLAFHKAAGGFGGIRILS 147 (542)
Q Consensus 116 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (542)
|++ +.+|+|||||+...+...||.|.|+|.+
T Consensus 110 ~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 110 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 995 6799999999998888899999999974
No 81
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.86 E-value=8.4e-09 Score=85.14 Aligned_cols=79 Identities=13% Similarity=0.129 Sum_probs=63.6
Q ss_pred cCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecchh
Q 009149 53 NWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLA 132 (542)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~ 132 (542)
|..|--..|++++||+|++.++|.....+++...+.... ..+.||++.+|.|+ ++++|+|.|+|.
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~------------~~~~pg~~~~~~~t-~~~~G~Y~y~C~-- 86 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID------------VVVESGKEKNITVK-PKSAGTYELICR-- 86 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE------------EEECTTCEEEEEEC-CCSCEEEEEECT--
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc------------eeecCCcceeEEEe-cccCceEEEECc--
Confidence 444545689999999999999999777777776654221 34789999999999 588999999997
Q ss_pred hhhhcceeeEEEEe
Q 009149 133 FHKAAGGFGGIRIL 146 (542)
Q Consensus 133 ~q~~~Gl~G~liV~ 146 (542)
.|...||.|.|+|+
T Consensus 87 ~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 87 YHLLKGMEGKVIVK 100 (100)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred cccCCCCEEEEEEC
Confidence 45667999999996
No 82
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.82 E-value=6.2e-09 Score=86.85 Aligned_cols=84 Identities=8% Similarity=0.044 Sum_probs=63.0
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEe-cCcee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIAL-DNVGM 490 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~a-dnpG~ 490 (542)
.+.++.|++|+|+ |.+...|.||+|+..+.. . .|. +. ....+|++.+.||+...+.|.+ +.||.
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~--~-~g~-~~---------~~~~~~~~~~~pG~~~~~~f~~~~~~G~ 85 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA--K-SAD-LA---------KSLSHKQLLMSPGQSTSTTFPADAPAGE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCCCBEECSSSSTT--C-CHH-HH---------HHHCBCSCCCSTTCEEEEECCTTCCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCceEEEeCCCCcc--c-ccc-cc---------hhccccceeeCCCCEEEEEEecCCCCce
Confidence 4678999998885 777788999999764311 0 000 00 0011467788999999998887 89999
Q ss_pred eEEEeechhhhhcceEEEEEEe
Q 009149 491 WNLRSESWARQYLGQQFYLRVY 512 (542)
Q Consensus 491 w~~HCHil~H~d~GMm~~~~V~ 512 (542)
|.|||| .|...||+..+.|.
T Consensus 86 y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 86 YTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--ChhhcCcEEEEEEc
Confidence 999999 79999999999985
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.79 E-value=6.9e-09 Score=85.25 Aligned_cols=80 Identities=15% Similarity=0.199 Sum_probs=59.0
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCC--cccCCCCCCCCeEEEEEEECCCceeeeEecchhhhh
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGV--YGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHK 135 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv--~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 135 (542)
-+.|++++||+|+ ++|.....+++|+|+...+. ..|.- ......+.||+++++.|. ++|+|||||+ .|.
T Consensus 17 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~--~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~H~ 87 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPS--GVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--PHQ 87 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECGGGSCT--TCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--GGG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCCC--ccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--Ccc
Confidence 4689999999865 58987778999999863321 11110 000134789999999885 6999999999 566
Q ss_pred hcceeeEEEEe
Q 009149 136 AAGGFGGIRIL 146 (542)
Q Consensus 136 ~~Gl~G~liV~ 146 (542)
..||.|.|+|+
T Consensus 88 ~~gM~G~i~V~ 98 (98)
T 2plt_A 88 GAGMVGKIIVQ 98 (98)
T ss_dssp GGTCEEEEEEC
T ss_pred ccCCeEEEEEC
Confidence 77999999984
No 84
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.76 E-value=2e-08 Score=87.18 Aligned_cols=77 Identities=12% Similarity=0.126 Sum_probs=56.1
Q ss_pred CCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCccc-CCCCCCCCeEEEEEEECCCceeeeEecchh
Q 009149 54 WQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGT-TCPIPPGKNFTYILQVKDQIGSFYYFPSLA 132 (542)
Q Consensus 54 g~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~ 132 (542)
..|-.+.|++++||+|+ ++|.....+++++... .+|.... ...+.||++++|.|. ++|+|||||-.+
T Consensus 55 ~~F~P~~i~V~~GdtV~--~~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF~---~~G~y~y~C~~H 122 (132)
T 3c75_A 55 MKYLTPEVTIKAGETVY--WVNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITFN---EAGSYDYFCTPH 122 (132)
T ss_dssp TEESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEEC---SCEEEEEECSSC
T ss_pred eEEeCCEEEECCCCEEE--EEECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEcC---CCEEEEEEeCCC
Confidence 34445799999999975 4588776777776432 1232222 345889999999883 699999999864
Q ss_pred hhhhcceeeEEEEe
Q 009149 133 FHKAAGGFGGIRIL 146 (542)
Q Consensus 133 ~q~~~Gl~G~liV~ 146 (542)
. ||.|.|+|+
T Consensus 123 ~----gM~G~I~V~ 132 (132)
T 3c75_A 123 P----FMRGKVIVE 132 (132)
T ss_dssp T----TCEEEEEEC
T ss_pred c----CCEEEEEEC
Confidence 3 999999985
No 85
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.72 E-value=2.7e-08 Score=81.68 Aligned_cols=81 Identities=14% Similarity=0.212 Sum_probs=57.3
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecchhhhhhc
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAA 137 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (542)
-+.|++++||+|+ +.|.....++++.++...++ ...++.......+.||+++++.| +++|+|||||+ .|...
T Consensus 18 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~pg-~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVK--WVNNKLSPHNIVFDADGVPA-DTAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGA 89 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECCSSSCH-HHHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEE--EEECCCCCcEEEEeCCCCCc-cccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccccc
Confidence 4689999999865 45876678899888743210 00000000023588999999988 36999999999 56778
Q ss_pred ceeeEEEEe
Q 009149 138 GGFGGIRIL 146 (542)
Q Consensus 138 Gl~G~liV~ 146 (542)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999985
No 86
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.70 E-value=4e-08 Score=79.35 Aligned_cols=76 Identities=21% Similarity=0.354 Sum_probs=56.4
Q ss_pred CccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecchhhhh
Q 009149 56 FPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHK 135 (542)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 135 (542)
|-.+.|++++||+|+ +.|.....++++.++.. ... . ....+.||+++++.| +++|+|||||+ .+.
T Consensus 16 f~P~~i~v~~Gd~V~--~~n~~~~~H~v~~~~~~----~~~--~--~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~ 80 (91)
T 1bxv_A 16 FEPSTIEIQAGDTVQ--WVNNKLAPHNVVVEGQP----ELS--H--KDLAFSPGETFEATF---SEPGTYTYYCE--PHR 80 (91)
T ss_dssp EESSEEEECTTCEEE--EEECSSCCEEEEETTCG----GGC--E--EEEECSTTCEEEEEC---CSCEEEEEECT--TTG
T ss_pred EeCCEEEECCCCEEE--EEECCCCCcEEEEeCCC----ccC--c--ccceeCCCCEEEEEe---CCCEEEEEEeC--CCc
Confidence 335689999999976 45876678888888621 000 0 024588999998887 46999999999 555
Q ss_pred hcceeeEEEEe
Q 009149 136 AAGGFGGIRIL 146 (542)
Q Consensus 136 ~~Gl~G~liV~ 146 (542)
..||.|.|+|+
T Consensus 81 ~~gM~g~i~V~ 91 (91)
T 1bxv_A 81 GAGMVGKIVVQ 91 (91)
T ss_dssp GGTCEEEEEEC
T ss_pred cCCCEEEEEEC
Confidence 66999999984
No 87
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.68 E-value=3.8e-08 Score=86.52 Aligned_cols=98 Identities=9% Similarity=-0.005 Sum_probs=70.5
Q ss_pred EeccCCcEEEEEEEc--CCCCCCCeeecCc--ceEEEeecCCCCCCcCCCCCC---CCCCCcceEEEeCCCCEEEEEEEe
Q 009149 413 MGADYRAFIEIVFQN--DEDIIQSYHLNGY--QFWVVGMDGGQWTSASRNQYN---LRDAVARVTVQVYPKSWSAIYIAL 485 (542)
Q Consensus 413 ~~~~~g~~v~~~i~N--~~~~~HP~HlHG~--~F~Vl~~~~g~~~~~~~~~~~---~~~p~~rDTv~vpp~g~~~irf~a 485 (542)
+.++.|++|+|++.| .+.+.|.||++.. .|.-+.. .+...... ..+- -....+++|..|.||+...+.|.+
T Consensus 35 i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~~ 112 (140)
T 1qhq_A 35 LSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVN-TAAQNNAD-ALFVPPPDTPNALAWTAMLNAGESGSVTFRT 112 (140)
T ss_dssp EEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHH-HHHHTCGG-GTTCCCTTCTTEEEECCCBCTTEEEEEEEEC
T ss_pred EEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhh-hhhhhccc-ccccCccccccccccceeeCCCceeEEEEEe
Confidence 678999999999999 6678999999842 2211000 00000000 0000 001347889999999999999999
Q ss_pred cCceeeEEEeechhhhhcceEEEEEEe
Q 009149 486 DNVGMWNLRSESWARQYLGQQFYLRVY 512 (542)
Q Consensus 486 dnpG~w~~HCHil~H~d~GMm~~~~V~ 512 (542)
+.||.|.|||++..|...||...+.|.
T Consensus 113 ~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 113 PAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred CCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999885
No 88
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.63 E-value=7.9e-08 Score=78.67 Aligned_cols=77 Identities=16% Similarity=0.316 Sum_probs=56.9
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcc--c-CCCCCCCCeEEEEEEECCCceeeeEecchhhh
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYG--T-TCPIPPGKNFTYILQVKDQIGSFYYFPSLAFH 134 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~--~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q 134 (542)
-+.|++++||+| ++.|.....++++.++... .+|..+ . ...+.||+++++.| +++|+|+|||+ .|
T Consensus 18 P~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H 85 (97)
T 1b3i_A 18 PKALSISAGDTV--EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PH 85 (97)
T ss_dssp SSEEEECTTCEE--EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--ST
T ss_pred CCEEEECCCCEE--EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Ch
Confidence 358999999985 5668766678888876432 122111 1 24588999999988 47999999999 56
Q ss_pred hhcceeeEEEEe
Q 009149 135 KAAGGFGGIRIL 146 (542)
Q Consensus 135 ~~~Gl~G~liV~ 146 (542)
...||.|.|+|+
T Consensus 86 ~~~gM~G~i~V~ 97 (97)
T 1b3i_A 86 RGAGMVGTITVE 97 (97)
T ss_dssp TTTTCEEEEEEC
T ss_pred hhcCCEEEEEEC
Confidence 667999999984
No 89
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.61 E-value=1.3e-07 Score=77.54 Aligned_cols=78 Identities=9% Similarity=-0.055 Sum_probs=59.7
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCc-ceEEEeCCCCEEEEEEEecCcee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVA-RVTVQVYPKSWSAIYIALDNVGM 490 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~-rDTv~vpp~g~~~irf~adnpG~ 490 (542)
.+.++.|++|+|+ |.+...|.+|+|+..+- + .. .+.+ +|+..+.||+...+.| +.||.
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p----g------~~-------~~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLSPHNIVFDADGVP----A------DT-------AAKLSHKGLLFAAGESFTSTF--TEPGT 78 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECCSSSC----H------HH-------HHHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCCCC----c------cc-------cccccccccccCCCCEEEEEc--CCCeE
Confidence 3689999998885 77778899999874321 0 00 0011 5788999999888765 89999
Q ss_pred eEEEeechhhhhcceEEEEEEe
Q 009149 491 WNLRSESWARQYLGQQFYLRVY 512 (542)
Q Consensus 491 w~~HCHil~H~d~GMm~~~~V~ 512 (542)
|.|||+ .|...||+..+.|.
T Consensus 79 y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 79 YTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEcC--CccccCCeEEEEEC
Confidence 999999 69999999999883
No 90
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.60 E-value=7.7e-08 Score=78.88 Aligned_cols=79 Identities=14% Similarity=0.121 Sum_probs=60.3
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|++|+| .|.+...|.+|+|+..+. .+ ++. ...++|+..+.||+...+.| +.||.|
T Consensus 19 ~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~p-----~~-~~~---------~~~~~~~~~~~pG~~~~~tf--~~~G~y 79 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNAGFPHNIVFDEDAIP-----SG-VNA---------DAISRDDYLNAPGETYSVKL--TAAGEY 79 (98)
T ss_dssp EEEECTTCEEEE--EECSSCCEEEEECGGGSC-----TT-CCH---------HHHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceEEEEeCCCCC-----Cc-ccc---------ccccccceecCCCCEEEEEe--CCCeEE
Confidence 367999999887 688778999999974220 00 000 01246889999999887755 689999
Q ss_pred EEEeechhhhhcceEEEEEE
Q 009149 492 NLRSESWARQYLGQQFYLRV 511 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V 511 (542)
.|||| .|.+.||+..+.|
T Consensus 80 ~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 80 GYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp EEECG--GGGGGTCEEEEEE
T ss_pred EEEcC--CccccCCeEEEEE
Confidence 99999 5999999999988
No 91
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.60 E-value=1.2e-07 Score=80.95 Aligned_cols=75 Identities=11% Similarity=0.042 Sum_probs=53.1
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecchhhhhhc
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAA 137 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (542)
-..|+|++||+|++.+.|. ++++..+.- ..-+|.- ...+.||++++|.|. ++|+|||+|- .|...
T Consensus 20 P~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~~--~f~~~pg~t~s~TF~---~pG~y~y~C~--~H~~~ 84 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGVE--SFKSKINESYTLTVT---EPGLYGVKCT--PHFGM 84 (123)
T ss_dssp SSEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeC--CCCcC
Confidence 3589999999977766662 333333321 1123321 234679999998884 6999999999 66778
Q ss_pred ceeeEEEEeC
Q 009149 138 GGFGGIRILS 147 (542)
Q Consensus 138 Gl~G~liV~~ 147 (542)
||.|.|+|.+
T Consensus 85 GM~G~I~V~~ 94 (123)
T 3erx_A 85 GMVGLVQVGD 94 (123)
T ss_dssp TCEEEEEESS
T ss_pred CcEEEEEECC
Confidence 9999999997
No 92
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.58 E-value=1.1e-07 Score=78.65 Aligned_cols=77 Identities=9% Similarity=0.040 Sum_probs=55.8
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCC-------CCccc---CCCCCCCCeEEEEEEECCCceeeeE
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFED-------GVYGT---TCPIPPGKNFTYILQVKDQIGSFYY 127 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~D-------Gv~~~---q~~i~pG~~~~Y~f~~~~~~Gt~wY 127 (542)
-+.|++++||+|+ ++|.....++++++. .. ..+ ..++. ...+.||+++++.| +++|+|+|
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y 85 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDI---PA--GAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTF 85 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECC---CT--TCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEE
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeC---cc--cccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEE
Confidence 4689999999976 568876677777763 11 011 00111 23478999999988 47999999
Q ss_pred ecchhhhhhcceeeEEEEe
Q 009149 128 FPSLAFHKAAGGFGGIRIL 146 (542)
Q Consensus 128 H~H~~~q~~~Gl~G~liV~ 146 (542)
||+ .|...||.|.|+|+
T Consensus 86 ~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 86 YCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp ECS--TTGGGTCEEEEEEC
T ss_pred EeC--CCcccCCeEEEEEC
Confidence 999 67778999999985
No 93
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.57 E-value=2.3e-07 Score=76.13 Aligned_cols=77 Identities=17% Similarity=0.309 Sum_probs=57.4
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCc----c--c-CCCCCCCCeEEEEEEECCCceeeeEecc
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVY----G--T-TCPIPPGKNFTYILQVKDQIGSFYYFPS 130 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~----~--~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H 130 (542)
-+.|++++||+| +++|.....++++.++... .+|.. . . ...+.||+++++.|. ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG
T ss_pred CCEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC
Confidence 358999999985 5589877788888886422 12221 0 1 234789999998885 6999999999
Q ss_pred hhhhhhcceeeEEEEe
Q 009149 131 LAFHKAAGGFGGIRIL 146 (542)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (542)
.|...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 --PHAGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CccccCCEEEEEEC
Confidence 56777999999984
No 94
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.57 E-value=2.3e-07 Score=76.18 Aligned_cols=77 Identities=17% Similarity=0.282 Sum_probs=56.8
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCc----c--c-CCCCCCCCeEEEEEEECCCceeeeEecc
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVY----G--T-TCPIPPGKNFTYILQVKDQIGSFYYFPS 130 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~----~--~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H 130 (542)
-+.|++++||+|+ ++|.....++++.++...+ +|.- . . ...+.||+++++.|. ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC
Confidence 4689999999864 5888767888887763221 2210 0 1 134789999998885 6999999999
Q ss_pred hhhhhhcceeeEEEEe
Q 009149 131 LAFHKAAGGFGGIRIL 146 (542)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (542)
.|...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 56778999999984
No 95
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.56 E-value=1.7e-07 Score=75.59 Aligned_cols=71 Identities=11% Similarity=0.093 Sum_probs=57.1
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|+.|+|+ |.+...|.+|+|+.. +...++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~~~~H~v~~~~~~-----------------------~~~~~~~~~~~g~~~~~~f--~~~G~y 72 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNKLAPHNVVVEGQP-----------------------ELSHKDLAFSPGETFEATF--SEPGTY 72 (91)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEETTCG-----------------------GGCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCC-----------------------ccCcccceeCCCCEEEEEe--CCCEEE
Confidence 3678999998874 776688999998720 0124778899999877765 899999
Q ss_pred EEEeechhhhhcceEEEEEE
Q 009149 492 NLRSESWARQYLGQQFYLRV 511 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V 511 (542)
.|||+ .|...||...+.|
T Consensus 73 ~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 73 TYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp EEECT--TTGGGTCEEEEEE
T ss_pred EEEeC--CCccCCCEEEEEE
Confidence 99999 6999999999987
No 96
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.53 E-value=1.3e-07 Score=81.16 Aligned_cols=77 Identities=16% Similarity=0.093 Sum_probs=52.7
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecchhhhhhc
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAA 137 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (542)
-+.|+|++||+|++.+.|. ++++..+.- ..-||.- ...+.||++++|.|. ++|+|||||. .|...
T Consensus 22 P~~i~V~~GDtVtf~n~~~---~H~v~~~~~-----~~P~g~~--~f~s~pGet~s~TF~---~pG~y~y~C~--~H~~~ 86 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK---GHNSALMKG-----GAPEGAE--TWKGKINEEITVTLS---KPGVYMYQCA--PHVGM 86 (127)
T ss_dssp SSEEEECTTCEEEEECSSS---SCCCEECTT-----CSCTTCC--CCBCCTTCCCEEECC---SCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEccC-----cCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeC--CCCcC
Confidence 4689999999976655543 433333211 0112221 244679999888884 6999999999 45678
Q ss_pred ceeeEEEEeCCC
Q 009149 138 GGFGGIRILSRP 149 (542)
Q Consensus 138 Gl~G~liV~~~~ 149 (542)
||.|.|+|.++.
T Consensus 87 GM~G~I~V~~~~ 98 (127)
T 3tu6_A 87 GMIGAIVVGEPA 98 (127)
T ss_dssp TCEEEEEESSCT
T ss_pred CcEEEEEECcCC
Confidence 999999999743
No 97
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.50 E-value=2.3e-07 Score=79.08 Aligned_cols=76 Identities=9% Similarity=-0.028 Sum_probs=54.1
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecchhhhhhc
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAA 137 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (542)
-..|+|++||+|+ ++|.. .++++..+... .-+|.. ...+.||++++|.|. .+|+|||||- .|...
T Consensus 21 P~~i~V~~GDTV~--f~n~~-~~Hnv~~~~~~-----~p~g~~--~~~~~pg~t~s~TF~---~~G~y~Y~C~--~H~~~ 85 (124)
T 3ef4_A 21 PGFVKVEAGDTVK--FVPTD-KSHNAESVREV-----WPEGVA--PVKGGFSKEVVFNAE---KEGLYVLKCA--PHYGM 85 (124)
T ss_dssp SSEEEECTTCEEE--EECSS-SSCCCEECTTT-----SCTTSC--CCBCCTTCCEEEECC---SSEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEE--EEECC-CCccEEEeCCc-----CCCCcc--ccccCCCCEEEEEeC---CCeEEEEEcC--CCCcC
Confidence 3689999999964 55654 45565554211 112321 244679999999884 6899999996 66778
Q ss_pred ceeeEEEEeCC
Q 009149 138 GGFGGIRILSR 148 (542)
Q Consensus 138 Gl~G~liV~~~ 148 (542)
||.|.|+|.++
T Consensus 86 GM~G~I~V~~p 96 (124)
T 3ef4_A 86 GMVVLVQVGKP 96 (124)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEECCC
Confidence 99999999873
No 98
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.47 E-value=4.6e-07 Score=76.19 Aligned_cols=74 Identities=12% Similarity=0.201 Sum_probs=58.1
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|+.|+|.+.|.+...|-|++... .-+..+.||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------------------------GVQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEECCCCEEE
Confidence 36799999999999999866555444321 025678999999999999999999
Q ss_pred EEEeechhhhhcceEEEEEEec
Q 009149 492 NLRSESWARQYLGQQFYLRVYT 513 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~~ 513 (542)
.||||...|... |...+.|.+
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEEC
T ss_pred EEECCCCCchHH-CEEEEEEeC
Confidence 999999766444 888888853
No 99
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.43 E-value=1.2e-07 Score=77.57 Aligned_cols=77 Identities=12% Similarity=0.128 Sum_probs=58.0
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|++|+|+ |.+...|.+++++..+. .+ . ....+++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~-----~~----~--------~~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG-----ES----A--------PALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT-----SC----H--------HHHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc-----cc----c--------ccccccceecCCCCEEEEEe--CCCeEE
Confidence 3678999998875 77777899999865440 00 0 00114667788888877765 899999
Q ss_pred EEEeechhhhhcceEEEEEE
Q 009149 492 NLRSESWARQYLGQQFYLRV 511 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V 511 (542)
.|||+ .|...||...+.|
T Consensus 79 ~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp EEECS--STTTTTCEEEEEE
T ss_pred EEEcc--ChhhcCCEEEEEE
Confidence 99999 6999999999987
No 100
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.42 E-value=5.5e-07 Score=80.68 Aligned_cols=92 Identities=17% Similarity=0.115 Sum_probs=60.9
Q ss_pred CCccceEEE-ecCCEEEEEEEeCCCCC-----ceEE--eccccC------------CCCCCCCCCccc-CCCCCCCCeEE
Q 009149 55 QFPGPDIHS-VTNDNLIINVFNSLDEP-----FLLS--WNGIQN------------RRNSFEDGVYGT-TCPIPPGKNFT 113 (542)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~i~v~N~l~~~-----~~iH--~HG~~~------------~~~~~~DGv~~~-q~~i~pG~~~~ 113 (542)
+|--..|.| +.||+|+|+|+|....+ +++- -+|... ..-+..|.--.. ...|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 454458999 99999999999997542 3322 222100 000001111001 24589999999
Q ss_pred EEEEEC-CCceeeeEecchhhhhhcceeeEEEEeC
Q 009149 114 YILQVK-DQIGSFYYFPSLAFHKAAGGFGGIRILS 147 (542)
Q Consensus 114 Y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (542)
+.|+++ -++|+|||+|-...|.. ||.|-|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 999863 16999999998777777 8999999974
No 101
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.36 E-value=5e-07 Score=74.09 Aligned_cols=81 Identities=9% Similarity=0.057 Sum_probs=59.0
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|++|+| .|.+...|.+|+++..|. .+ ++... . ...+|++.+.||+...+.| +.||.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~~~---~----~~~~~~~~~~~G~~~~~~f--~~~G~y 80 (99)
T 1byp_A 18 DLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDVTK---I----SMPEEDLLNAPGEEYSVTL--TEKGTY 80 (99)
T ss_dssp EEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCHHH---H----SCCTTCCBCSTTCEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccccc---c----cccccceeeCCCCEEEEEe--CCCcEE
Confidence 467899999887 688778999999975430 00 00000 0 0125667788999877765 699999
Q ss_pred EEEeechhhhhcceEEEEEE
Q 009149 492 NLRSESWARQYLGQQFYLRV 511 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V 511 (542)
.|||+ .|...||...+.|
T Consensus 81 ~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 81 KFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp EEECG--GGTTTTCEEEEEE
T ss_pred EEEcC--CccccCCEEEEEE
Confidence 99999 6999999999987
No 102
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.32 E-value=1.8e-06 Score=70.96 Aligned_cols=71 Identities=11% Similarity=0.114 Sum_probs=58.7
Q ss_pred EeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeE
Q 009149 413 MGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWN 492 (542)
Q Consensus 413 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~ 492 (542)
+.++.|+.|+|++.|.+...|.|.+.+..+ ...+.||+...+.|.++.||.|.
T Consensus 30 i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~~~G~Y~ 82 (100)
T 4hci_A 30 ITIPINESTTLLLKNKGKSEHTFTIKKLGI---------------------------DVVVESGKEKNITVKPKSAGTYE 82 (100)
T ss_dssp EEECTTSCEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEECCCSCEEEE
T ss_pred EEECCCCEEEEEEEcCCCceEEEEEecCCc---------------------------ceeecCCcceeEEEecccCceEE
Confidence 679999999999999987777776644322 24567889999999999999999
Q ss_pred EEeechhhhhcceEEEEEEe
Q 009149 493 LRSESWARQYLGQQFYLRVY 512 (542)
Q Consensus 493 ~HCHil~H~d~GMm~~~~V~ 512 (542)
|+|.. |...||...+.|+
T Consensus 83 y~C~~--H~~~gM~G~i~Ve 100 (100)
T 4hci_A 83 LICRY--HLLKGMEGKVIVK 100 (100)
T ss_dssp EECTT--TGGGTCEEEEEEC
T ss_pred EECcc--ccCCCCEEEEEEC
Confidence 99974 9999999988873
No 103
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.32 E-value=8.9e-07 Score=72.50 Aligned_cols=79 Identities=16% Similarity=0.167 Sum_probs=55.3
Q ss_pred CccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCc-c-c---CCCCCCCCeEEEEEEECCCceeeeEecc
Q 009149 56 FPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVY-G-T---TCPIPPGKNFTYILQVKDQIGSFYYFPS 130 (542)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-~-~---q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H 130 (542)
|--+.|++++||+|+ +.|.....+++....-. .-+|.- . + ...+.||+++++.| +++|+|||+|-
T Consensus 15 F~P~~i~v~~GdtV~--~~n~~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~ 84 (98)
T 1iuz_A 15 FVPSKISVAAGEAIE--FVNNAGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCE 84 (98)
T ss_dssp EESSEEEECTTCEEE--EEECSSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECT
T ss_pred EeCCEEEECCCCEEE--EEECCCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc---CCCEEEEEEch
Confidence 334689999999955 56886667777765421 112221 0 0 12478999999888 37999999998
Q ss_pred hhhhhhcceeeEEEEe
Q 009149 131 LAFHKAAGGFGGIRIL 146 (542)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (542)
. |...||.|.|+|+
T Consensus 85 ~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 85 P--HAGAGMKMTITVQ 98 (98)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred h--hccCCCEEEEEEC
Confidence 5 5567999999985
No 104
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.28 E-value=2.2e-06 Score=73.11 Aligned_cols=76 Identities=13% Similarity=0.076 Sum_probs=50.8
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecchhhhhhc
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAA 137 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (542)
-+.|++++||+|+ ++|... ++++..+- ...-||.- .....||++++|.|. .+|+|||+|. .|...
T Consensus 20 P~~i~V~~GdtV~--f~~~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF~---~~G~y~y~C~--~H~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVT--FIPVDK-GHNVESIK-----DMIPEGAE--KFKSKINENYVLTVT---QPGAYLVKCT--PHYAM 84 (123)
T ss_dssp SSEEEECTTCEEE--EEESSS-SCCCEECT-----TCSCTTCC--CCBCCTTCCEEEECC---SCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEE--EEECCC-CeEEEEec-----ccCCCCcc--ceecCCCCEEEEEeC---CCEEEEEEeC--CcccC
Confidence 4689999999965 555533 44443321 11112221 123568999888884 6999999997 46668
Q ss_pred ceeeEEEEeCC
Q 009149 138 GGFGGIRILSR 148 (542)
Q Consensus 138 Gl~G~liV~~~ 148 (542)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999873
No 105
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.25 E-value=6.6e-06 Score=70.70 Aligned_cols=92 Identities=14% Similarity=0.067 Sum_probs=60.9
Q ss_pred CCccceEEEecC-CEEEEEEEeCCCCC-----ceE--EeccccC-------------CCCCCCCCCccc-CCCCCCCCeE
Q 009149 55 QFPGPDIHSVTN-DNLIINVFNSLDEP-----FLL--SWNGIQN-------------RRNSFEDGVYGT-TCPIPPGKNF 112 (542)
Q Consensus 55 ~~pgP~i~v~~G-d~v~i~v~N~l~~~-----~~i--H~HG~~~-------------~~~~~~DGv~~~-q~~i~pG~~~ 112 (542)
+|--..|.|++| |+|+|+|+|....+ +++ --+|... ...+..|.--.. ...|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343458999999 99999999986432 332 2222100 000001111001 2358999999
Q ss_pred EEEEEEC--CCceeeeEecchhhhhhcceeeEEEEeC
Q 009149 113 TYILQVK--DQIGSFYYFPSLAFHKAAGGFGGIRILS 147 (542)
Q Consensus 113 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (542)
++.|+++ .++|+|||.|-...|.. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999964 37999999998777777 8999999974
No 106
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.22 E-value=2.5e-06 Score=72.85 Aligned_cols=76 Identities=9% Similarity=0.016 Sum_probs=51.3
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecchhhhhhc
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAA 137 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (542)
-+.|++++||+|+ ++|... .+++..+. ...-||.- ...+.||++++|.|. .+|+|||+|. .|...
T Consensus 20 P~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF~---~~G~y~y~C~--~H~~~ 84 (123)
T 1pmy_A 20 PALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGAD--YVKTTVGQEAVVKFD---KEGVYGFKCA--PHYMM 84 (123)
T ss_dssp SSEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTCC--CCBCCTTSCEEEECC---SCEEEEEECS--TTTTT
T ss_pred CCEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeC--Ccccc
Confidence 4689999999954 566533 44433321 11122221 134579999888884 6999999997 36667
Q ss_pred ceeeEEEEeCC
Q 009149 138 GGFGGIRILSR 148 (542)
Q Consensus 138 Gl~G~liV~~~ 148 (542)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1pmy_A 85 GMVALVVVGDK 95 (123)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEcCC
Confidence 99999999874
No 107
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.21 E-value=6.9e-06 Score=68.19 Aligned_cols=76 Identities=12% Similarity=0.142 Sum_probs=52.8
Q ss_pred CCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCccc-CCCCCCCCeEEEEEEECCCceeeeEecchhh
Q 009149 55 QFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGT-TCPIPPGKNFTYILQVKDQIGSFYYFPSLAF 133 (542)
Q Consensus 55 ~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~-q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~ 133 (542)
.|--..|+|++||+|+ +.|.....+++...... .|.... ...+.||+++++.| +++|+|+|+|-.+.
T Consensus 30 ~F~P~~i~V~~G~tV~--~~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~ 97 (106)
T 1id2_A 30 KYLTPEVTIKAGETVY--WVNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 97 (106)
T ss_dssp EESSSEEEECTTCEEE--EEECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEE--EEECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC
Confidence 3434689999999975 45886655555544321 111111 23578999999888 36999999998743
Q ss_pred hhhcceeeEEEEe
Q 009149 134 HKAAGGFGGIRIL 146 (542)
Q Consensus 134 q~~~Gl~G~liV~ 146 (542)
||.|.|+|+
T Consensus 98 ----~M~G~I~V~ 106 (106)
T 1id2_A 98 ----FMRGKVIVE 106 (106)
T ss_dssp ----TCEEEEEEC
T ss_pred ----CCEEEEEEC
Confidence 999999984
No 108
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.21 E-value=1.6e-06 Score=71.41 Aligned_cols=84 Identities=8% Similarity=-0.058 Sum_probs=57.8
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCc-ceEEEeCCCCEEEEEEEecCcee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVA-RVTVQVYPKSWSAIYIALDNVGM 490 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~-rDTv~vpp~g~~~irf~adnpG~ 490 (542)
.+.++.|++|+|+ |.+...|.++++.-... .+.+.... ..+.+ .+++.+.||+...+.| +.||.
T Consensus 18 ~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~~~~pG~~~~~tf--~~~G~ 82 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASEL------KAASMDENDLLSEDEPSFKAKV--STPGT 82 (102)
T ss_dssp EEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHHH------HHTSCCTTCCBBTTBCEEEECC--CSCEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccchh------hcccccccceecCCCCEEEEEe--CCCeE
Confidence 4789999998875 77778899998821000 00000000 00122 4667788998877765 89999
Q ss_pred eEEEeechhhhhcceEEEEEEe
Q 009149 491 WNLRSESWARQYLGQQFYLRVY 512 (542)
Q Consensus 491 w~~HCHil~H~d~GMm~~~~V~ 512 (542)
|.|||+ .|...||...+.|.
T Consensus 83 y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 83 YTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EEEECS--TTGGGTCEEEEEEC
T ss_pred EEEEeC--CCcccCCeEEEEEC
Confidence 999999 69999999999883
No 109
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.02 E-value=6.5e-06 Score=67.36 Aligned_cols=81 Identities=10% Similarity=0.046 Sum_probs=57.6
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|++|+| .|.+...|.++++...+- .+ .+... . ...++.+.+.||+...+.| +.||.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~-~~~~~---~----~~~~~~~~~~~G~~~~~tf--~~~G~y 80 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SG-VDASK---I----SMSEEDLLNAKGETFEVAL--SNKGEY 80 (99)
T ss_dssp EEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TT-CCHHH---H----CCCTTCCBCSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceEEEEeCCCCc-----cc-ccccc---c----ccccCccccCCCCEEEEEE--CCCceE
Confidence 478999999887 787778899999874320 00 00000 0 0123456788898877755 699999
Q ss_pred EEEeechhhhhcceEEEEEE
Q 009149 492 NLRSESWARQYLGQQFYLRV 511 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V 511 (542)
.|||+ .|...||...+.|
T Consensus 81 ~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 81 SFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEECG--GGTTTTCEEEEEE
T ss_pred EEEcC--CCcccCCEEEEEE
Confidence 99999 5999999999887
No 110
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.02 E-value=3.4e-05 Score=66.24 Aligned_cols=92 Identities=17% Similarity=0.108 Sum_probs=59.3
Q ss_pred CCccceEEE-ecCCEEEEEEEeCCCCC-----ceEEe--ccccC-------------CCCCCCCCCccc-CCCCCCCCeE
Q 009149 55 QFPGPDIHS-VTNDNLIINVFNSLDEP-----FLLSW--NGIQN-------------RRNSFEDGVYGT-TCPIPPGKNF 112 (542)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~i~v~N~l~~~-----~~iH~--HG~~~-------------~~~~~~DGv~~~-q~~i~pG~~~ 112 (542)
+|--..|.| ++||+|+|+++|....+ +++-+ +|... ...+..|.--.. ...|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 343458999 99999999999997542 33322 22100 000011111011 2358999999
Q ss_pred EEEEEECC-Ccee-eeEecchhhhhhcceeeEEEEeC
Q 009149 113 TYILQVKD-QIGS-FYYFPSLAFHKAAGGFGGIRILS 147 (542)
Q Consensus 113 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 147 (542)
++.|+++. .+|+ |||.|-...|.. ||.|.|+|.+
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 99999630 4655 999998777777 8999999963
No 111
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.98 E-value=1.4e-05 Score=68.06 Aligned_cols=74 Identities=8% Similarity=0.020 Sum_probs=49.6
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecchhhhhhc
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAA 137 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (542)
-+.|+|++||+|. +.|... .++++... ...-+|.. ...+.||++++|.|. ++|+|||+|-.+..
T Consensus 20 P~~i~V~~GdtV~--f~n~d~-~H~v~~~~-----~~~p~~~~--~~~~~~g~t~~~tF~---~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 20 PASLKVAPGDTVT--FIPTDK-GHNVETIK-----GMIPDGAE--AFKSKINENYKVTFT---APGVYGVKCTPHPF--- 83 (122)
T ss_dssp SSEEEECTTEEEE--EEESSS-SCCCEECT-----TCSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEEETTEEE---
T ss_pred CCEEEECCCCEEE--EEECCC-CcEEEEcc-----cccCCCcc--eeecCCCCEEEEEeC---CCEEEEEEeCCCcc---
Confidence 4689999999855 556643 44444332 11112221 234678999998884 68999999987432
Q ss_pred ceeeEEEEeCC
Q 009149 138 GGFGGIRILSR 148 (542)
Q Consensus 138 Gl~G~liV~~~ 148 (542)
|.|.|+|.+.
T Consensus 84 -M~G~I~V~~~ 93 (122)
T 2ux6_A 84 -MVGVVQVGDA 93 (122)
T ss_dssp -EEEEEEESSS
T ss_pred -CEEEEEEeCC
Confidence 9999999873
No 112
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.97 E-value=2.8e-05 Score=81.64 Aligned_cols=88 Identities=15% Similarity=0.130 Sum_probs=63.2
Q ss_pred EEEEEcCCCccceEEEecCCEEEEEEEeCC---CCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCcee
Q 009149 48 RGILINWQFPGPDIHSVTNDNLIINVFNSL---DEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGS 124 (542)
Q Consensus 48 ~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l---~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt 124 (542)
.+...+-.|--+.|+|++||+|++.++|.. +..+++...++ |+ ..-+.||++.++.|+ ++++|+
T Consensus 547 ~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------GI---K~DaiPGrtnsvtFt-adkPGv 613 (638)
T 3sbq_A 547 YMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------GV---SMEISPQQTSSITFV-ADKPGL 613 (638)
T ss_dssp EEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------TE---EEEECTTCEEEEEEE-CCSCEE
T ss_pred EEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------Cc---eeeeCCCCeEEEEEE-cCCCEE
Confidence 344555667667999999999999999974 33333332221 11 234789999999999 589999
Q ss_pred eeEecchh-hhhhcceeeEEEEeCC
Q 009149 125 FYYFPSLA-FHKAAGGFGGIRILSR 148 (542)
Q Consensus 125 ~wYH~H~~-~q~~~Gl~G~liV~~~ 148 (542)
|||+|..- .....+|.|.|+|+++
T Consensus 614 Y~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 614 HWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEECCCcCCCCcccceEEEEEecC
Confidence 99999953 2223579999999973
No 113
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.93 E-value=4.9e-05 Score=65.11 Aligned_cols=91 Identities=16% Similarity=0.113 Sum_probs=59.3
Q ss_pred CCccceEEE-ecCCEEEEEEEeCCCCC-----ceEEe--cccc-------CCCCCCC-----CCCccc--CCCCCCCCeE
Q 009149 55 QFPGPDIHS-VTNDNLIINVFNSLDEP-----FLLSW--NGIQ-------NRRNSFE-----DGVYGT--TCPIPPGKNF 112 (542)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~i~v~N~l~~~-----~~iH~--HG~~-------~~~~~~~-----DGv~~~--q~~i~pG~~~ 112 (542)
+|--..|.| ++||+|+|+++|....+ +++-+ .|.. +.....+ |..-.+ ...|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 444458999 99999999999997542 44332 2210 0000001 111111 2358999999
Q ss_pred EEEEEECC-Ccee-eeEecchhhhhhcceeeEEEEe
Q 009149 113 TYILQVKD-QIGS-FYYFPSLAFHKAAGGFGGIRIL 146 (542)
Q Consensus 113 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 146 (542)
++.|+++. .+|+ |||.|-...|.. ||.|-|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999631 4776 999998877777 899999984
No 114
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.93 E-value=5.6e-05 Score=64.74 Aligned_cols=92 Identities=22% Similarity=0.168 Sum_probs=60.0
Q ss_pred CCccceEEE-ecCCEEEEEEEeCCCCC-----ceEEec--c---------cc----CCCCCCCCCCccc-CCCCCCCCeE
Q 009149 55 QFPGPDIHS-VTNDNLIINVFNSLDEP-----FLLSWN--G---------IQ----NRRNSFEDGVYGT-TCPIPPGKNF 112 (542)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~i~v~N~l~~~-----~~iH~H--G---------~~----~~~~~~~DGv~~~-q~~i~pG~~~ 112 (542)
+|--.+|.| +.|++|+|+++|....+ +++-+= + +. ...-+..|.--.. ...|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 454458999 99999999999997543 443321 1 00 0000011111001 2357999999
Q ss_pred EEEEEECC-Ccee-eeEecchhhhhhcceeeEEEEeC
Q 009149 113 TYILQVKD-QIGS-FYYFPSLAFHKAAGGFGGIRILS 147 (542)
Q Consensus 113 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 147 (542)
++.|+++. ++|+ |+|.|-...|.. ||.|.|+|.+
T Consensus 93 ~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 99999631 5885 999998777777 8999999963
No 115
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.91 E-value=2.1e-05 Score=69.91 Aligned_cols=83 Identities=10% Similarity=0.051 Sum_probs=60.0
Q ss_pred eEEeccCCcEEEEEEEcCC-CCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceE-------EEeCCCC--EEE
Q 009149 411 AVMGADYRAFIEIVFQNDE-DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVT-------VQVYPKS--WSA 480 (542)
Q Consensus 411 ~~~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDT-------v~vpp~g--~~~ 480 (542)
..+.++.|+.|.+++.|.+ ...|-|-++. .+. .+... |...+. ..|.||+ ...
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~-------~~~-~~~~~---------~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITK-------KGP-PYAVM---------PVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEES-------CCS-CCCSS---------CCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEee-------cCc-chhcc---------ccccccccccccccccCCCCceEEE
Confidence 3588999999999999974 5556665552 111 11100 001121 1567888 999
Q ss_pred EEEEecCceeeEEEeechhhhhcceEEEEEE
Q 009149 481 IYIALDNVGMWNLRSESWARQYLGQQFYLRV 511 (542)
Q Consensus 481 irf~adnpG~w~~HCHil~H~d~GMm~~~~V 511 (542)
+.|++ .||.|.||||+-.|...||-..+.|
T Consensus 124 ~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 124 FTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 99999 9999999999999999999999887
No 116
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.87 E-value=3.2e-05 Score=63.96 Aligned_cols=71 Identities=8% Similarity=0.027 Sum_probs=50.3
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|+.|+| .|.+...|.+|+|... .|. . .+ ++-.+.||+...+.| +.||.|
T Consensus 34 ~i~v~~Gd~V~~--~N~d~~~H~v~~~~~~-------~g~----~---------~~-~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTW--INREAMPHNVHFVAGV-------LGE----A---------AL-KGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECTTT-------SSS----S---------CE-ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCCEEEEEcCCC-------CCc----c---------cc-cccccCCCCEEEEEe--CCCEEE
Confidence 367899999888 4877788999998521 110 0 01 122367888666554 899999
Q ss_pred EEEeechhhhhcceEEEEEE
Q 009149 492 NLRSESWARQYLGQQFYLRV 511 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V 511 (542)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 54 99988877
No 117
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.87 E-value=3.6e-05 Score=82.47 Aligned_cols=74 Identities=11% Similarity=0.141 Sum_probs=60.2
Q ss_pred EEeccCCcEEEEEEEcCC---CCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCc
Q 009149 412 VMGADYRAFIEIVFQNDE---DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNV 488 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 488 (542)
.+.++.|+.|+|.+.|.+ +..|.|+++++.+. ..+.||+...+.|+++.|
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~p 566 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAANP 566 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCSC
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCCC
Confidence 478999999999999964 34788888864321 467789999999999999
Q ss_pred eeeEEEeec---hhhhhcceEEEEEEecC
Q 009149 489 GMWNLRSES---WARQYLGQQFYLRVYTA 514 (542)
Q Consensus 489 G~w~~HCHi---l~H~d~GMm~~~~V~~~ 514 (542)
|.|.||||. ..|. ||...+.|.++
T Consensus 567 GtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 567 GVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp EEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred EEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 999999993 3454 99999999754
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.29 E-value=0.0013 Score=55.45 Aligned_cols=88 Identities=16% Similarity=0.167 Sum_probs=55.5
Q ss_pred CCccceEEEec-CCEEEEEEEeCCCCC-----ceEEe-----------ccccCC----CCCCCCCCccc-CCCCCCCCeE
Q 009149 55 QFPGPDIHSVT-NDNLIINVFNSLDEP-----FLLSW-----------NGIQNR----RNSFEDGVYGT-TCPIPPGKNF 112 (542)
Q Consensus 55 ~~pgP~i~v~~-Gd~v~i~v~N~l~~~-----~~iH~-----------HG~~~~----~~~~~DGv~~~-q~~i~pG~~~ 112 (542)
+|--..|.|+. |++|+|+|+|....+ +++=+ -|+... .-+..|-.-.. ..-|.||+++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 34456899986 999999999997442 32211 122110 00111211111 3358999999
Q ss_pred EEEEEEC--CCceeeeEecchhhhhhcceeeEEEEe
Q 009149 113 TYILQVK--DQIGSFYYFPSLAFHKAAGGFGGIRIL 146 (542)
Q Consensus 113 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (542)
+..|+.+ .++|+|.|.|. .|. ||.|.++|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999975 27899999999 555 899999984
No 119
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.11 E-value=0.0013 Score=54.25 Aligned_cols=71 Identities=13% Similarity=-0.019 Sum_probs=49.0
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|+.|+|+ |.+...|-+++.... .+ .. ..++-.+.+|+...+.| +.||.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~-------~~----~~----------~~~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VG----ED----------AFRGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SS----SS----------CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCC-------CC----cc----------cccccccCCCCEEEEEe--CCCEEE
Confidence 3678999999885 777677877665321 00 00 01223466788766655 899999
Q ss_pred EEEeechhhhhcceEEEEEE
Q 009149 492 NLRSESWARQYLGQQFYLRV 511 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V 511 (542)
.|+|-+ |. ||...+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999987 65 99998877
No 120
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.10 E-value=0.00099 Score=56.51 Aligned_cols=75 Identities=9% Similarity=0.074 Sum_probs=50.7
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|++|+|+..+ ..|-+..+.. .+... .+.+.+.+|+...+. ++.||.|
T Consensus 23 ~i~V~~GDTV~f~n~~---~~Hnv~~~~~----------~~p~g------------~~~~~~~pg~t~s~T--F~~~G~y 75 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD---KSHNAESVRE----------VWPEG------------VAPVKGGFSKEVVFN--AEKEGLY 75 (124)
T ss_dssp EEEECTTCEEEEECSS---SSCCCEECTT----------TSCTT------------SCCCBCCTTCCEEEE--CCSSEEE
T ss_pred EEEECCCCEEEEEECC---CCccEEEeCC----------cCCCC------------ccccccCCCCEEEEE--eCCCeEE
Confidence 4789999999996443 5676665421 11110 011224467765554 4899999
Q ss_pred EEEeechhhhhcceEEEEEEecCC
Q 009149 492 NLRSESWARQYLGQQFYLRVYTAS 515 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~~~~ 515 (542)
.|||- .|...||...+.|.+|.
T Consensus 76 ~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 76 VLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEcC--CCCcCCCEEEEEECCCC
Confidence 99996 69999999999998763
No 121
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.06 E-value=0.00087 Score=54.36 Aligned_cols=79 Identities=13% Similarity=0.116 Sum_probs=53.6
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|++|+|+ |.+...|-+.+... .+... .+. .....+...+.+|+...+.| +.||.|
T Consensus 19 ~i~v~~GdtV~~~--n~~~~~H~v~~~~~----------~~p~g----~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~y 79 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNAGFPHNIVFDED----------AVPAG----VDA-DAISYDDYLNSKGETVVRKL--STPGVY 79 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECTT----------SSCTT----CCH-HHHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCEEEEEeCC----------CCccc----ccc-ccccccccccCCCCEEEEEc--CCCEEE
Confidence 4789999998884 76666776665531 11000 000 00113456788999777765 899999
Q ss_pred EEEeechhhhhcceEEEEEE
Q 009149 492 NLRSESWARQYLGQQFYLRV 511 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V 511 (542)
.|+|-+ |..+||-..+.|
T Consensus 80 ~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 80 GVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEECTT--TGGGTCEEEEEE
T ss_pred EEEchh--hccCCCEEEEEE
Confidence 999986 888899998887
No 122
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=96.98 E-value=0.00098 Score=56.85 Aligned_cols=75 Identities=12% Similarity=0.003 Sum_probs=49.4
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|++|+|++.|. .|-+..+.. .+ ++.. ..+.+.|++... ++++.||.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g~-----------~~f~s~pGet~s--~TF~~pG~y 76 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEGA-----------ETWKGKINEEIT--VTLSKPGVY 76 (127)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTTC-----------CCCBCCTTCCCE--EECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEccC----------cC-CCCc-----------cceecCCCCEEE--EEeCCCeEE
Confidence 46899999999976663 455544321 01 1100 011224676544 455899999
Q ss_pred EEEeechhhhhcceEEEEEEecCC
Q 009149 492 NLRSESWARQYLGQQFYLRVYTAS 515 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~~~~ 515 (542)
.|||- .|...||...+.|.++.
T Consensus 77 ~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 77 MYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp EEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEeC--CCCcCCcEEEEEECcCC
Confidence 99999 49999999999998753
No 123
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.95 E-value=0.002 Score=55.38 Aligned_cols=71 Identities=13% Similarity=-0.023 Sum_probs=49.8
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|+.|+|+ |.+...|-+++.... .| . . ..++-.+.||+...+.| +.||.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g----~---------~-~~~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VG----E---------D-AFRGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SS----S---------S-CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCC-------CC----c---------c-cccccccCCCCEEEEEc--CCCEEE
Confidence 3678999999885 777777887765321 00 0 0 01233467888776665 899999
Q ss_pred EEEeechhhhhcceEEEEEE
Q 009149 492 NLRSESWARQYLGQQFYLRV 511 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V 511 (542)
.|||-+ |. ||...+.|
T Consensus 116 ~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--Cc--CCEEEEEE
Confidence 999987 65 99998887
No 124
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=96.91 E-value=0.0027 Score=53.75 Aligned_cols=73 Identities=8% Similarity=0.055 Sum_probs=49.6
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|++|+|++.|. .|-+..+. +.+.. .. +.+.+.|++...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~P~-g~-----------~~f~~~pg~t~s~TF--~~pG~y 74 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---SHNVEAIK----------EILPE-GV-----------ESFKSKINESYTLTV--TEPGLY 74 (123)
T ss_dssp EEEECTTEEEEEEESST---TCCCEECT----------TSSCT-TC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcC----------CcCCC-Cc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 37899999999988773 35555432 11110 00 011134677555555 899999
Q ss_pred EEEeechhhhhcceEEEEEEec
Q 009149 492 NLRSESWARQYLGQQFYLRVYT 513 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~~ 513 (542)
.|+|- .|...||-..+.|.+
T Consensus 75 ~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 75 GVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp EEECG--GGTTTTCEEEEEESS
T ss_pred EEEeC--CCCcCCcEEEEEECC
Confidence 99999 599999999999976
No 125
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.74 E-value=0.0071 Score=52.08 Aligned_cols=73 Identities=15% Similarity=0.223 Sum_probs=52.7
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecch--h-hhh
Q 009149 59 PDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSL--A-FHK 135 (542)
Q Consensus 59 P~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~--~-~q~ 135 (542)
..|.++.|++|++.++|. +.. |+..... -|. ..-+.||+.-++.|+ .+++|+|+|+|.. + .|
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV~-----Hsf~ip~----~~~---k~d~~PG~~~~~~~~-~~~~G~y~~~C~e~CG~~H- 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DVI-----HGFHVEG----TNI---NVEVLPGEVSTVRYT-FKRPGEYRIICNQYCGLGH- 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SSC-----EEEEETT----SSC---EEEECBTBCEEEEEE-CCSCEEEEEECCSCCSTTS-
T ss_pred CEEEEcCCCEEEEEEEeC-Ccc-----ceEEecC----CCc---eeEeCCCCcEEEEEE-cCCCEEEEEECcccCCCCc-
Confidence 379999999999999997 333 4443221 111 134678998899999 4789999999963 2 23
Q ss_pred hcceeeEEEEeC
Q 009149 136 AAGGFGGIRILS 147 (542)
Q Consensus 136 ~~Gl~G~liV~~ 147 (542)
.+|.|.++|.+
T Consensus 125 -~~M~g~v~V~~ 135 (135)
T 2cua_A 125 -QNMFGTIVVKE 135 (135)
T ss_dssp -TTCEEEEEEEC
T ss_pred -CCCEEEEEEEC
Confidence 48999999864
No 126
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.50 E-value=0.013 Score=52.28 Aligned_cols=81 Identities=12% Similarity=0.146 Sum_probs=57.5
Q ss_pred cCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecch-
Q 009149 53 NWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSL- 131 (542)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~- 131 (542)
+-++--..|.++.|++|++.++|. +..++...-++ | ++.-+.||+..++.|+ ++++|+|++.|..
T Consensus 87 ~~~f~Pn~l~VP~G~~Vr~~vTS~-DViHsf~IP~l---------g---ik~da~PG~~n~~~~~-~~kpG~y~g~Cse~ 152 (168)
T 3s8f_B 87 AFGYQPNPIEVPQGAEIVFKITSP-DVIHGFHVEGT---------N---INVEVLPGEVSTVRYT-FKRPGEYRIICNQY 152 (168)
T ss_dssp TTEEESSSEEEETTSEEEEEEECS-SSCEEEEETTS---------S---CEEEECTTBCEEEEEE-CCSCEEEEEECCSC
T ss_pred eceEecCEEEEeCCCeEEEEEecC-CceEEEEECCC---------C---eEEEecCCceeEEEEE-eCCCEEEEEECCcC
Confidence 333333579999999999999997 44433333222 1 1234679999999999 5889999999984
Q ss_pred hhhhhcceeeEEEEeC
Q 009149 132 AFHKAAGGFGGIRILS 147 (542)
Q Consensus 132 ~~q~~~Gl~G~liV~~ 147 (542)
-.....+|.|-++|++
T Consensus 153 CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 153 CGLGHQNMFGTIVVKE 168 (168)
T ss_dssp CSTTGGGCEEEEEEEC
T ss_pred CCCCcCCCEEEEEEeC
Confidence 3444567999999974
No 127
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.41 E-value=0.0096 Score=62.76 Aligned_cols=74 Identities=11% Similarity=0.103 Sum_probs=58.4
Q ss_pred EEeccCCcEEEEEEEcCC---CCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCc
Q 009149 412 VMGADYRAFIEIVFQNDE---DIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNV 488 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 488 (542)
.+.++.|+.|+|++.|.+ +..|.|.+.+.... +.+.||....+.|+++.|
T Consensus 559 eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK---------------------------~DaiPGrtnsvtFtadkP 611 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS---------------------------MEISPQQTSSITFVADKP 611 (638)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCSC
T ss_pred EEEEecCceeEEEEecCCcCCCceeeeEecCCCce---------------------------eeeCCCCeEEEEEEcCCC
Confidence 477999999999999974 57777766543211 356788999999999999
Q ss_pred eeeEEEeechhhh-hcceEEEEEEe
Q 009149 489 GMWNLRSESWARQ-YLGQQFYLRVY 512 (542)
Q Consensus 489 G~w~~HCHil~H~-d~GMm~~~~V~ 512 (542)
|.|.++|...-|. |.+|...+.|+
T Consensus 612 GvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 612 GLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp EEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred EEEEEECCCcCCCCcccceEEEEEe
Confidence 9999999976553 56898888875
No 128
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.27 E-value=0.017 Score=48.79 Aligned_cols=74 Identities=5% Similarity=0.011 Sum_probs=47.4
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|++|.|+..+. .|-+.++- +.. ++... .+.+.+|+.. .++++.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~-p~~~~-----------~~~~~pG~t~--~~tF~~~G~y 74 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK---GHNVESIK----------DMI-PEGAE-----------KFKSKINENY--VLTVTQPGAY 74 (123)
T ss_dssp EEEECTTCEEEEEESSS---SCCCEECT----------TCS-CTTCC-----------CCBCCTTCCE--EEECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CeEEEEec----------ccC-CCCcc-----------ceecCCCCEE--EEEeCCCEEE
Confidence 36789999998865543 35555431 111 10000 0112466654 4555899999
Q ss_pred EEEeechhhhhcceEEEEEEecC
Q 009149 492 NLRSESWARQYLGQQFYLRVYTA 514 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~~~ 514 (542)
.|+|- .|...||...+.|.++
T Consensus 75 ~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 75 LVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp EEECT--TTGGGTCEEEEEESSS
T ss_pred EEEeC--CcccCCCEEEEEEcCC
Confidence 99997 4999999999999763
No 129
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.07 E-value=0.012 Score=49.80 Aligned_cols=38 Identities=11% Similarity=0.183 Sum_probs=30.2
Q ss_pred eCCCCEEEEEEEecCceeeEEEeechhhhhcceEEEEEEecC
Q 009149 473 VYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTA 514 (542)
Q Consensus 473 vpp~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 514 (542)
+.+|+... ++++.||.|.|+|-. |...||...+.|.++
T Consensus 58 ~~pG~t~~--~tF~~~G~y~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAV--VKFDKEGVYGFKCAP--HYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEE--EECCSCEEEEEECST--TTTTTCEEEEEESSC
T ss_pred cCCCCEEE--EEeCCCeEEEEEeCC--ccccCCEEEEEEcCC
Confidence 34677544 455899999999984 999999999999753
No 130
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.68 E-value=0.037 Score=47.50 Aligned_cols=72 Identities=17% Similarity=0.200 Sum_probs=51.6
Q ss_pred EeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeE
Q 009149 413 MGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWN 492 (542)
Q Consensus 413 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~ 492 (542)
+.++.|+.|+|++.|.+ ..| .|+|-+.+ . -+.+.||....+.|+++.||.|.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~H-------sf~ip~~~------------------~--k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIH-------GFHVEGTN------------------I--NVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCE-------EEEETTSS------------------C--EEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccc-------eEEecCCC------------------c--eeEeCCCCcEEEEEEcCCCEEEE
Confidence 67899999999999974 434 34432111 0 14456787788999999999999
Q ss_pred EEeechh-hhhcceEEEEEEe
Q 009149 493 LRSESWA-RQYLGQQFYLRVY 512 (542)
Q Consensus 493 ~HCHil~-H~d~GMm~~~~V~ 512 (542)
++|...- .-|.+|-..+.|.
T Consensus 114 ~~C~e~CG~~H~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGHQNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTSTTCEEEEEEE
T ss_pred EECcccCCCCcCCCEEEEEEE
Confidence 9997621 2336898888875
No 131
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.61 E-value=0.029 Score=49.96 Aligned_cols=94 Identities=10% Similarity=0.011 Sum_probs=60.6
Q ss_pred Eec-cCCcEEEEEEEcCCCCCC-CeeecCcceEEEeecCCCCCCc-------CCCCCCC-CC-CCcceEEEeCCCCEEEE
Q 009149 413 MGA-DYRAFIEIVFQNDEDIIQ-SYHLNGYQFWVVGMDGGQWTSA-------SRNQYNL-RD-AVARVTVQVYPKSWSAI 481 (542)
Q Consensus 413 ~~~-~~g~~v~~~i~N~~~~~H-P~HlHG~~F~Vl~~~~g~~~~~-------~~~~~~~-~~-p~~rDTv~vpp~g~~~i 481 (542)
+.+ +.|+.|.|+|.|.+.... -| +|.|-+...+. ++.. ....+-. .+ -....|..|.||+...|
T Consensus 60 itV~kaG~~Vtv~~~N~g~~p~~~m---~Hn~vi~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~sv 134 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQPKASM---GHNLVIAKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSL 134 (167)
T ss_dssp EEEETTCSSEEEEEEECSCSCHHHH---CBCCEEEEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred EEEecCCCEEEEEEEECCCCccccc---cceEEeccCcc--hhhhHHHhhhccccccccccccchhccceeeCCCCEEEE
Confidence 678 899999999999975420 00 23443433221 0000 0000000 01 12345667899999999
Q ss_pred EEEec--CceeeEEEeechhhhhcceEEEEEEe
Q 009149 482 YIALD--NVGMWNLRSESWARQYLGQQFYLRVY 512 (542)
Q Consensus 482 rf~ad--npG~w~~HCHil~H~d~GMm~~~~V~ 512 (542)
.|.++ .||.|-|+|-+-.|.. ||-..+.|.
T Consensus 135 tf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 135 TLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp EECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred EEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 99988 8999999999888888 899988885
No 132
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.50 E-value=0.066 Score=45.53 Aligned_cols=98 Identities=8% Similarity=-0.010 Sum_probs=61.3
Q ss_pred EEeccCC-cEEEEEEEcCCCCCCCeeecCcceEEEeecCCC------CCCcCCCCCCC-CC-CCcceEEEeCCCCEEEEE
Q 009149 412 VMGADYR-AFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQ------WTSASRNQYNL-RD-AVARVTVQVYPKSWSAIY 482 (542)
Q Consensus 412 ~~~~~~g-~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~------~~~~~~~~~~~-~~-p~~rDTv~vpp~g~~~ir 482 (542)
.+.++.| +.|.+++.|.+.... =-=+|.|-+...+... ........+-. .+ -....|..|.||+...+.
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~--~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPK--TGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVK 96 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCH--HHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEE
T ss_pred eEEEcCCCeEEEEEEEECCCCcc--cccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEE
Confidence 4789999 999999999875320 0003445444432100 00000000000 01 112356678899999999
Q ss_pred EEec---CceeeEEEeechhhhhcceEEEEEEe
Q 009149 483 IALD---NVGMWNLRSESWARQYLGQQFYLRVY 512 (542)
Q Consensus 483 f~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 512 (542)
|.++ .||.|-|.|-+-.|.. ||-..+.|.
T Consensus 97 f~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 97 FKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp EEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred EeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 9997 8999999999888888 899988885
No 133
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.25 E-value=0.046 Score=46.05 Aligned_cols=71 Identities=4% Similarity=0.049 Sum_probs=44.8
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|++|.|+ |.+. .|-+++.. +.+... .. .+.+.+|+...+. ++.||.|
T Consensus 22 ~i~V~~GdtV~f~--n~d~-~H~v~~~~----------~~~p~~-~~-----------~~~~~~g~t~~~t--F~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFI--PTDK-GHNVETIK----------GMIPDG-AE-----------AFKSKINENYKVT--FTAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEE--ESSS-SCCCEECT----------TCSCTT-CC-----------CCBCCTTCCEEEE--ECSCEEE
T ss_pred EEEECCCCEEEEE--ECCC-CcEEEEcc----------cccCCC-cc-----------eeecCCCCEEEEE--eCCCEEE
Confidence 4678999998885 4433 56666553 111110 00 0122467765554 4899999
Q ss_pred EEEeechhhhhcceEEEEEEec
Q 009149 492 NLRSESWARQYLGQQFYLRVYT 513 (542)
Q Consensus 492 ~~HCHil~H~d~GMm~~~~V~~ 513 (542)
.|+|-+ |.. |...+.|.+
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEETT--EEE--EEEEEEESS
T ss_pred EEEeCC--Ccc--CEEEEEEeC
Confidence 999987 554 999999976
No 134
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=94.60 E-value=0.13 Score=45.78 Aligned_cols=72 Identities=17% Similarity=0.238 Sum_probs=54.8
Q ss_pred EeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeE
Q 009149 413 MGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWN 492 (542)
Q Consensus 413 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~ 492 (542)
+.++.|+.|++.+.|. +..|.|-+=. .+ . -+.+-||....+.|+++.||.|.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~-------lg-----------------i---k~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEG-------TN-----------------I---NVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETT-------SS-----------------C---EEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECC-------CC-----------------e---EEEecCCceeEEEEEeCCCEEEE
Confidence 5689999999999997 5655554422 11 0 13455788888999999999999
Q ss_pred EEeec-hhhhhcceEEEEEEe
Q 009149 493 LRSES-WARQYLGQQFYLRVY 512 (542)
Q Consensus 493 ~HCHi-l~H~d~GMm~~~~V~ 512 (542)
+.|.. --+.|.+|...+.|.
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEE
T ss_pred EECCcCCCCCcCCCEEEEEEe
Confidence 99995 456788999999885
No 135
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.51 E-value=0.14 Score=43.02 Aligned_cols=95 Identities=8% Similarity=0.035 Sum_probs=59.1
Q ss_pred eEEeccC-CcEEEEEEEcCCCCCCCeeecCcceEEEeecCCC-C--CC--cC-CCCCC-C-CCCCcceEEEeCCCCEEEE
Q 009149 411 AVMGADY-RAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQ-W--TS--AS-RNQYN-L-RDAVARVTVQVYPKSWSAI 481 (542)
Q Consensus 411 ~~~~~~~-g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~-~--~~--~~-~~~~~-~-~~p~~rDTv~vpp~g~~~i 481 (542)
.-+.++. |+.|+++|.|.+..+ ---=||.|-+...+.-. . +. .. ...|- - ...+...|..|.||+...|
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~v 95 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLP--KNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSV 95 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCC--HHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEE
T ss_pred CEEEEecCCCEEEEEEEECCccc--ccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEE
Confidence 3478876 999999999997431 00004566555332100 0 00 00 00111 0 1234556778999999999
Q ss_pred EEEec---CceeeEEEeechhhhhcceEEEEEE
Q 009149 482 YIALD---NVGMWNLRSESWARQYLGQQFYLRV 511 (542)
Q Consensus 482 rf~ad---npG~w~~HCHil~H~d~GMm~~~~V 511 (542)
.|.+. .+|.|-|-|- -|. ||-..+.|
T Consensus 96 tf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 96 TFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 99997 8999999999 688 89988877
No 136
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.27 E-value=0.097 Score=44.42 Aligned_cols=96 Identities=9% Similarity=-0.045 Sum_probs=59.7
Q ss_pred EEec-cCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCC--------cCCCCCCC-CCC-CcceEEEeCCCCEEE
Q 009149 412 VMGA-DYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTS--------ASRNQYNL-RDA-VARVTVQVYPKSWSA 480 (542)
Q Consensus 412 ~~~~-~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~--------~~~~~~~~-~~p-~~rDTv~vpp~g~~~ 480 (542)
.+.+ +.|+.|.+++.|.+..+ ---=+|.|-+...+. ... .....+-. .++ ....|..|.||+...
T Consensus 18 ~i~V~k~G~~vtv~~~N~g~~p--~~~m~Hn~vi~~~~~--~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~ 93 (128)
T 2iaa_C 18 SIVVDKTCKEFTINLKHTGKLP--KAAMGHNVVVSKKSD--ESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDS 93 (128)
T ss_dssp EEEECTTCSEEEEEEEECSCSC--HHHHCBCCEEEETTH--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred EEEEecCCcEEEEEEEECCCCc--ccCCCceEEEccccc--hhhHHHhhhhccccccccccccchhhccceeeCCCCEEE
Confidence 3678 88999999999987542 000023443333210 000 00000100 011 123456789999999
Q ss_pred EEEEec--Cce-eeEEEeechhhhhcceEEEEEEe
Q 009149 481 IYIALD--NVG-MWNLRSESWARQYLGQQFYLRVY 512 (542)
Q Consensus 481 irf~ad--npG-~w~~HCHil~H~d~GMm~~~~V~ 512 (542)
|.|.+. .+| .|-|.|-+-.|.. ||-..+.|.
T Consensus 94 vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 94 VTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred EEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 999998 899 5999999888888 899998885
No 137
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=93.66 E-value=0.18 Score=42.80 Aligned_cols=95 Identities=7% Similarity=-0.040 Sum_probs=59.8
Q ss_pred EEec-cCCcEEEEEEEcCCCCC-CCeeecCcceEEEeecCCCCCCc--------CCCCCCC-CCC-CcceEEEeCCCCEE
Q 009149 412 VMGA-DYRAFIEIVFQNDEDII-QSYHLNGYQFWVVGMDGGQWTSA--------SRNQYNL-RDA-VARVTVQVYPKSWS 479 (542)
Q Consensus 412 ~~~~-~~g~~v~~~i~N~~~~~-HP~HlHG~~F~Vl~~~~g~~~~~--------~~~~~~~-~~p-~~rDTv~vpp~g~~ 479 (542)
.+.+ +.|+.|.+++.|.+..+ --| +|.|-+...+. .... ....+-. .++ ....|..|.||+..
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m---~H~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 19 EIVVDKSCKQFTMHLKHVGKMAKVAM---GHNLVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHH---CBCCEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEEEecCCCEEEEEEEECCCcccccC---cceEEEcCccc--hhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 3778 88999999999997542 000 23444443321 0000 0000100 011 12345578999999
Q ss_pred EEEEEec--Ccee-eEEEeechhhhhcceEEEEEEe
Q 009149 480 AIYIALD--NVGM-WNLRSESWARQYLGQQFYLRVY 512 (542)
Q Consensus 480 ~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 512 (542)
.|-|.++ .||. |-|.|-+-.|.. ||-..+.|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 9999998 7866 999999888888 899998885
No 138
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=93.12 E-value=0.33 Score=41.07 Aligned_cols=97 Identities=9% Similarity=0.015 Sum_probs=58.7
Q ss_pred EEec-cCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCC------CCCcCCCCCCC-CCC-CcceEEEeCCCCEEEEE
Q 009149 412 VMGA-DYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQ------WTSASRNQYNL-RDA-VARVTVQVYPKSWSAIY 482 (542)
Q Consensus 412 ~~~~-~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~------~~~~~~~~~~~-~~p-~~rDTv~vpp~g~~~ir 482 (542)
.+.+ +.|+.|.+++.|.+..+ -=-=+|.|.+...+.-. ........+-. .++ ....|-.|.||+...|.
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p--~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLP--KNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCC--HHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred EEEEecCCCEEEEEEEECCCCc--ccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEE
Confidence 3788 89999999999987542 00002334333321100 00000000100 011 12345568999999999
Q ss_pred EEec--Ccee-eEEEeechhhhhcceEEEEEE
Q 009149 483 IALD--NVGM-WNLRSESWARQYLGQQFYLRV 511 (542)
Q Consensus 483 f~ad--npG~-w~~HCHil~H~d~GMm~~~~V 511 (542)
|.+. .||. |-|.|-+-.|.. ||-..+.|
T Consensus 97 f~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 97 FDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 9997 7876 999999888888 89888877
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=85.46 E-value=6.8 Score=32.42 Aligned_cols=71 Identities=13% Similarity=0.298 Sum_probs=49.1
Q ss_pred cCcEE--EEEEEEcCCCceEEEEEe-cce--eEEEeecCcccc--------eeeeeeEEEcCCceEEEEEEeCC--CCcc
Q 009149 208 QGKTY--RLRISNVGLQNSLNFRIQ-NHK--MKLVEVEGTHTL--------QTTYSSLDVHVGQSYSVLVTADQ--PARD 272 (542)
Q Consensus 208 ~G~~~--rlRliNa~~~~~~~~~i~-gh~--~~via~DG~~~~--------p~~~~~l~l~pgeR~dv~v~~~~--~~g~ 272 (542)
.|+.+ .|.+.|.+. ....|.+. |+. |.|...+|..+- ........|.|||...+-...++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~-~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSE-RAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSS-SCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCC-CcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 44444 677888888 34466663 444 444444576552 23467899999999999999984 5899
Q ss_pred eEEEEee
Q 009149 273 YYIVVSS 279 (542)
Q Consensus 273 y~i~~~~ 279 (542)
|.+++.-
T Consensus 95 Ytl~a~l 101 (120)
T 3isy_A 95 YEVKVTF 101 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998864
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=74.04 E-value=5.1 Score=36.49 Aligned_cols=77 Identities=5% Similarity=0.102 Sum_probs=55.3
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.++.|+.|++.|.+.+ ..| .|+|-+-+. . +.+-||....+.|.++.||.|
T Consensus 42 ~l~lP~g~~V~~~lTS~D-ViH-------SF~IP~lgv-----------------K---~daiPGr~n~l~~~~~~pG~y 93 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS-VMH-------SFFIPRLGS-----------------Q---IYAMAGMQTRLHLIANEPGTY 93 (205)
T ss_dssp EEEEETTSCEEEEEEESS-SCE-------EEEEGGGTE-----------------E---EEECTTCCEEEEECCSSSEEE
T ss_pred eEEEeCCCEEEEEEecCC-cee-------eEEecccCc-----------------E---EEecCCceEEEEEEeCCCeEE
Confidence 367999999999999874 434 555543321 1 234467888899999999999
Q ss_pred EEEeechhh-hhcceEEEEEEe-cCCc
Q 009149 492 NLRSESWAR-QYLGQQFYLRVY-TAST 516 (542)
Q Consensus 492 ~~HCHil~H-~d~GMm~~~~V~-~~~~ 516 (542)
...|-.+-. -+..|-..++|+ .+++
T Consensus 94 ~g~CsE~CG~~Hs~M~~~v~vv~~~~~ 120 (205)
T 1cyx_A 94 DGICAEICGPGHSGMKFKAIATPDRAA 120 (205)
T ss_dssp EEEECSCCSTTSTTCCEEEEEESSHHH
T ss_pred EEEcccccccchhhceEEEEEECCHHH
Confidence 999987643 356677888887 5544
No 141
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=72.92 E-value=6 Score=38.31 Aligned_cols=78 Identities=5% Similarity=0.092 Sum_probs=57.3
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.+|.|+.|++.+.+.+ ..|. |+|-+-+. . +.+-||....+.|.++.||.|
T Consensus 190 ~lvlP~g~~V~~~ltS~D-ViHs-------f~iP~lg~-----------------k---~daiPG~~n~~~~~~~~~G~y 241 (298)
T 3hb3_B 190 PVVVPVGKKVLVQVTATD-VIHA-------WTIPAFAV-----------------K---QDAVPGRIAQLWFSVDQEGVY 241 (298)
T ss_dssp CEEEESSSEEEEEEEESS-SCEE-------EEEGGGTE-----------------E---EEECTTCCEEEEEECSSSEEE
T ss_pred eEEEEcCCEEEEEEEeCC-ccce-------eeEcccCc-----------------e---EEecCCceEEEEEEeCCCEEE
Confidence 367999999999999974 5454 44432221 1 233467778899999999999
Q ss_pred EEEeech-hhhhcceEEEEEEecCCcc
Q 009149 492 NLRSESW-ARQYLGQQFYLRVYTASTS 517 (542)
Q Consensus 492 ~~HCHil-~H~d~GMm~~~~V~~~~~~ 517 (542)
...|.-+ ..-|..|-..++|+++++.
T Consensus 242 ~g~CsE~CG~~Hs~M~~~v~vvs~~~F 268 (298)
T 3hb3_B 242 FGQCSELCGINHAYMPIVVKAVSQEKY 268 (298)
T ss_dssp EECCCSCCSTTTTSCCEEEEEECHHHH
T ss_pred EEEcccccCcCccCCeeEEEEEcHHHH
Confidence 9999965 4567788889999887653
No 142
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=67.04 E-value=18 Score=32.88 Aligned_cols=60 Identities=8% Similarity=0.113 Sum_probs=45.5
Q ss_pred ceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009149 202 AAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 202 ~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
..+.+..|+.+||+|-+... .+.|.|.....++ ..-||..-.+.+.++ .+|.|+..|+..
T Consensus 41 n~l~lP~g~~V~~~lTS~DV--iHSF~IP~lgvK~----------------daiPGr~n~l~~~~~-~pG~y~g~CsE~ 100 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNSV--MHSFFIPRLGSQI----------------YAMAGMQTRLHLIAN-EPGTYDGICAEI 100 (205)
T ss_dssp SEEEEETTSCEEEEEEESSS--CEEEEEGGGTEEE----------------EECTTCCEEEEECCS-SSEEEEEEECSC
T ss_pred ceEEEeCCCEEEEEEecCCc--eeeEEecccCcEE----------------EecCCceEEEEEEeC-CCeEEEEEcccc
Confidence 46899999999999987644 6677776554433 345777777778777 799999999854
No 143
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=65.64 E-value=11 Score=35.88 Aligned_cols=77 Identities=8% Similarity=0.120 Sum_probs=55.5
Q ss_pred EEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceee
Q 009149 412 VMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 491 (542)
Q Consensus 412 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w 491 (542)
.+.+|.|+.|++.+.+.+ ..| .|+|-+-+. ..| +-||....+.|.++.||.|
T Consensus 172 ~l~lP~g~~v~~~~tS~D-ViH-------sf~ip~l~~-----------------k~d---a~PG~~n~~~~~~~~~G~y 223 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGAD-VIH-------SWTVPAFGV-----------------KQD---AVPGRLAQLWFRAEREGIF 223 (262)
T ss_dssp CEEEETTSEEEEEEEESS-SCE-------EEEEGGGTE-----------------EEE---ECBTCCEEEEEECCSCEEE
T ss_pred eEEEecCCEEEEEEEECc-ccc-------eeeecccCc-----------------eEE---ecCCceeEEEEecCCcEEE
Confidence 367999999999999874 434 455533321 123 3367777899999999999
Q ss_pred EEEeechh-hhhcceEEEEEEecCCc
Q 009149 492 NLRSESWA-RQYLGQQFYLRVYTAST 516 (542)
Q Consensus 492 ~~HCHil~-H~d~GMm~~~~V~~~~~ 516 (542)
...|--+- --|..|-..++|+++++
T Consensus 224 ~g~Cse~CG~~H~~M~~~v~vv~~~~ 249 (262)
T 2gsm_B 224 FGQCSELCGISHAYMPITVKVVSEEA 249 (262)
T ss_dssp EECCCSCCSTTGGGCCEEEEEECHHH
T ss_pred EEEChHhcccCcccCeEEEEEEcHHH
Confidence 99998653 34667888888887654
No 144
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=63.56 E-value=24 Score=28.80 Aligned_cols=46 Identities=20% Similarity=0.380 Sum_probs=31.5
Q ss_pred EEEEEEEEcCCCc-eEEEEEecc-eeEEEeecCcccceeeeeeEEEcCCceEEEEEEe
Q 009149 211 TYRLRISNVGLQN-SLNFRIQNH-KMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTA 266 (542)
Q Consensus 211 ~~rlRliNa~~~~-~~~~~i~gh-~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~ 266 (542)
.|+|+|+|.+... .|.|.+.|. .+.++ | + ..+.+.|||..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEE
Confidence 6899999999654 777777774 23332 2 1 14899999977766554
No 145
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=55.94 E-value=15 Score=33.95 Aligned_cols=78 Identities=6% Similarity=0.060 Sum_probs=55.1
Q ss_pred eEEeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCcee
Q 009149 411 AVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGM 490 (542)
Q Consensus 411 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~ 490 (542)
+.+.+|.|+.|++.+.+.+ ..| +|+|-+-+. ..| .-||..-.+.|.++.||.
T Consensus 140 n~lvlP~~~~Vr~~vtS~D-ViH-------sf~vP~lg~-----------------K~D---aiPGr~n~~~~~~~~~G~ 191 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED-VLH-------SWAVPSLGL-----------------KTD---AIPGRLNQTTLMSSRPGL 191 (227)
T ss_dssp SCEEEETTSCEEEEEEESS-SCE-------EEEEGGGTE-----------------EEE---ECTTCCEEEEECCSSCEE
T ss_pred ceEEEecCCEEEEEEEeCc-ccc-------eeeecccCc-----------------EEE---ecCCceEEEEEecCCcEE
Confidence 3467999999999999874 444 455533321 223 335777788999999999
Q ss_pred eEEEeechh-hhhcceEEEEEEecCCc
Q 009149 491 WNLRSESWA-RQYLGQQFYLRVYTAST 516 (542)
Q Consensus 491 w~~HCHil~-H~d~GMm~~~~V~~~~~ 516 (542)
|...|.-+- --|.-|-..++|+++++
T Consensus 192 y~g~Cse~CG~~Hs~M~~~v~vv~~~~ 218 (227)
T 1v54_B 192 YYGQCSEICGSNHSFMPIVLELVPLKY 218 (227)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHHH
T ss_pred EEEEehhhcccccccCeEEEEEEcHHH
Confidence 999998653 34566778888877654
No 146
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=52.20 E-value=40 Score=32.50 Aligned_cols=75 Identities=13% Similarity=0.038 Sum_probs=52.2
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecch-hhhhhc
Q 009149 59 PDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSL-AFHKAA 137 (542)
Q Consensus 59 P~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~ 137 (542)
..|.+..|++|++.+++. +.-++.....+. ++.-.-||..-+..|. ++++|+|+..|.. -+....
T Consensus 189 N~lvlP~g~~V~~~ltS~-DViHsf~iP~lg------------~k~daiPG~~n~~~~~-~~~~G~y~g~CsE~CG~~Hs 254 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT-DVIHAWTIPAFA------------VKQDAVPGRIAQLWFS-VDQEGVYFGQCSELCGINHA 254 (298)
T ss_dssp SCEEEESSSEEEEEEEES-SSCEEEEEGGGT------------EEEEECTTCCEEEEEE-CSSSEEEEECCCSCCSTTTT
T ss_pred ceEEEEcCCEEEEEEEeC-CccceeeEcccC------------ceEEecCCceEEEEEE-eCCCEEEEEEcccccCcCcc
Confidence 579999999999999996 333333332221 1233568988888999 5889999999984 233344
Q ss_pred ceeeEEEEeC
Q 009149 138 GGFGGIRILS 147 (542)
Q Consensus 138 Gl~G~liV~~ 147 (542)
.|.+.+.|.+
T Consensus 255 ~M~~~v~vvs 264 (298)
T 3hb3_B 255 YMPIVVKAVS 264 (298)
T ss_dssp SCCEEEEEEC
T ss_pred CCeeEEEEEc
Confidence 5778887776
No 147
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=50.17 E-value=45 Score=31.47 Aligned_cols=75 Identities=13% Similarity=0.072 Sum_probs=51.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecch-hhhhhc
Q 009149 59 PDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSL-AFHKAA 137 (542)
Q Consensus 59 P~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~ 137 (542)
..|.+..|+.|++.+++. +.-++...-.+. ++.-+-||..-...|. ++++|+|+..|.. -+....
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~------------~k~da~PG~~n~~~~~-~~~~G~y~g~Cse~CG~~H~ 236 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFG------------VKQDAVPGRLAQLWFR-AEREGIFFGQCSELCGISHA 236 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGT------------EEEEECBTCCEEEEEE-CCSCEEEEECCCSCCSTTGG
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccC------------ceEEecCCceeEEEEe-cCCcEEEEEEChHhcccCcc
Confidence 369999999999999987 333333333221 1233567988888998 5899999999983 122233
Q ss_pred ceeeEEEEeC
Q 009149 138 GGFGGIRILS 147 (542)
Q Consensus 138 Gl~G~liV~~ 147 (542)
.|.+.+.|.+
T Consensus 237 ~M~~~v~vv~ 246 (262)
T 2gsm_B 237 YMPITVKVVS 246 (262)
T ss_dssp GCCEEEEEEC
T ss_pred cCeEEEEEEc
Confidence 4777777775
No 148
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=47.45 E-value=1.2e+02 Score=24.92 Aligned_cols=72 Identities=13% Similarity=0.131 Sum_probs=48.2
Q ss_pred EEEEEcCCCccceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCccc----CCCCCCCCeEEEEEEECC--C
Q 009149 48 RGILINWQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGT----TCPIPPGKNFTYILQVKD--Q 121 (542)
Q Consensus 48 ~~~~~Ng~~pgP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~----q~~i~pG~~~~Y~f~~~~--~ 121 (542)
.+...|-+-=.=+|+...|.+..+.|.+.-. ...| -|+||-+.. +..|.||++.+|+...++ .
T Consensus 23 ~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G---~~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~ 91 (120)
T 3isy_A 23 NMSLKNQSERAIEFQFSTGQKFELVVYDSEH---KERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPE 91 (120)
T ss_dssp EEEEEECSSSCEEEEESSSCCEEEEEECTTC---CEEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCC
T ss_pred EEEEEcCCCCcEEEEeCCCCEEEEEEECCCC---CEEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCCC
Confidence 3333444332447888888888888887532 2223 257777654 345999999999999974 4
Q ss_pred ceeeeEecc
Q 009149 122 IGSFYYFPS 130 (542)
Q Consensus 122 ~Gt~wYH~H 130 (542)
+|+|..+.=
T Consensus 92 pG~Ytl~a~ 100 (120)
T 3isy_A 92 PGTYEVKVT 100 (120)
T ss_dssp SEEEEEEEE
T ss_pred CccEEEEEE
Confidence 899977643
No 149
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=45.19 E-value=43 Score=32.95 Aligned_cols=17 Identities=24% Similarity=0.464 Sum_probs=15.1
Q ss_pred CCCCCCCCeEEEEEEEC
Q 009149 103 TCPIPPGKNFTYILQVK 119 (542)
Q Consensus 103 q~~i~pG~~~~Y~f~~~ 119 (542)
..||+|||+.+.+..+.
T Consensus 319 ~~pI~PGETr~~~v~a~ 335 (382)
T 1yew_A 319 NSPLAPGETRTVDVTAS 335 (382)
T ss_dssp CSCBCTTCEEEEEEEEE
T ss_pred CCCcCCCceeEEEEEee
Confidence 67899999999999874
No 150
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=45.09 E-value=27 Score=29.57 Aligned_cols=35 Identities=17% Similarity=0.386 Sum_probs=28.9
Q ss_pred EEEECCCceeeeEecchhhhhhcceeeEEEEeCCC
Q 009149 115 ILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRP 149 (542)
Q Consensus 115 ~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 149 (542)
.|++.+.+|++||-|-...|=..||...|.|....
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~ 110 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVAAN 110 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcCCC
Confidence 56652469999999999888899999999998754
No 151
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=44.67 E-value=21 Score=29.77 Aligned_cols=47 Identities=23% Similarity=0.329 Sum_probs=27.6
Q ss_pred EEEEEeCCCCCc---eEEeccccCCCC---CCCCCCcccCCCCCCCCeEEEEE
Q 009149 70 IINVFNSLDEPF---LLSWNGIQNRRN---SFEDGVYGTTCPIPPGKNFTYIL 116 (542)
Q Consensus 70 ~i~v~N~l~~~~---~iH~HG~~~~~~---~~~DGv~~~q~~i~pG~~~~Y~f 116 (542)
.|++.|..+.+. +=||.=....+. -.-+||-|-|.-|.||++|+|.=
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTS 86 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeC
Confidence 477788876654 557763321111 11345544466799999888853
No 152
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=42.48 E-value=49 Score=27.38 Aligned_cols=62 Identities=6% Similarity=0.105 Sum_probs=35.4
Q ss_pred cceEEEecCCEEEEEEEeCCC---CC--ceEEe--ccccCCCC-CCCCCCcccCCCCCCCCeEEEEEEEC
Q 009149 58 GPDIHSVTNDNLIINVFNSLD---EP--FLLSW--NGIQNRRN-SFEDGVYGTTCPIPPGKNFTYILQVK 119 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~---~~--~~iH~--HG~~~~~~-~~~DGv~~~q~~i~pG~~~~Y~f~~~ 119 (542)
.+.=.++.|..+.|.+.=... .. +.+|+ .|+..+.. ...|+=-++.|||.+|+.++|.+.++
T Consensus 24 ~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 24 SDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp TSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBCTTCEEEEEEEEE
T ss_pred CCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCcccCCEEEEEEEEeE
Confidence 344567788888887772221 11 22332 34444321 22333222479999999999997763
No 153
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=42.32 E-value=18 Score=35.23 Aligned_cols=76 Identities=8% Similarity=0.166 Sum_probs=53.6
Q ss_pred EeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeE
Q 009149 413 MGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWN 492 (542)
Q Consensus 413 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~ 492 (542)
+.++.|+.|++.+.+.+ ..| .|+|-+-+. ..| +-||....+.|.++.||.|.
T Consensus 153 l~lP~g~~V~~~lTS~D-ViH-------sf~IP~lg~-----------------k~D---aiPGr~n~~~~~~~~~G~y~ 204 (315)
T 1fft_B 153 IAFPANTPVYFKVTSNS-VMN-------SFFIPRLGS-----------------QIY---AMAGMQTRLHLIANEPGTYD 204 (315)
T ss_dssp CCCCSSSEEEEEECBSS-SCE-------EEEEGGGTE-----------------EEE---ECBTSCEEEEEECCSCBCCE
T ss_pred EEEeCCCEEEEEEEeCC-ccc-------eeeecccCc-----------------EEe---ecCCcceeeEEecCCCeEEE
Confidence 56899999999998874 444 455533321 123 33677788999999999999
Q ss_pred EEeechh-hhhcceEEEEEEe-cCCc
Q 009149 493 LRSESWA-RQYLGQQFYLRVY-TAST 516 (542)
Q Consensus 493 ~HCHil~-H~d~GMm~~~~V~-~~~~ 516 (542)
..|--+- --|..|-..++|+ ++++
T Consensus 205 g~CsE~CG~~Hs~M~~~v~vv~~~~~ 230 (315)
T 1fft_B 205 GISASYSGPGFSGMKFKAIATPDRAA 230 (315)
T ss_dssp EBCCSCCSTTTTTCCEECCBCSSTHH
T ss_pred EeccccchhhHHhccceEEEecCHHH
Confidence 9998653 3456677888887 5544
No 154
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=41.30 E-value=21 Score=29.68 Aligned_cols=55 Identities=20% Similarity=0.282 Sum_probs=30.4
Q ss_pred EEEEEeCCCCCc---eEEeccccCCCC---CCCCCCcccCCCCCCCCeEEEEEEE--CCCcee
Q 009149 70 IINVFNSLDEPF---LLSWNGIQNRRN---SFEDGVYGTTCPIPPGKNFTYILQV--KDQIGS 124 (542)
Q Consensus 70 ~i~v~N~l~~~~---~iH~HG~~~~~~---~~~DGv~~~q~~i~pG~~~~Y~f~~--~~~~Gt 124 (542)
.|++.|..+.+. +=||.=....+. -.-+||-|-|.-|.||++|+|.=-. +.+.|+
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg~~L~tp~G~ 95 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGTALDTPVGV 95 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEEEEEESSSEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeCCcCcCCCcEE
Confidence 477778776554 457753321111 1134444446679999988875432 234554
No 155
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=39.02 E-value=27 Score=28.53 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=28.6
Q ss_pred EEEEECCCceeeeEecchhhhhhcceeeEE-EEeCCC
Q 009149 114 YILQVKDQIGSFYYFPSLAFHKAAGGFGGI-RILSRP 149 (542)
Q Consensus 114 Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~l-iV~~~~ 149 (542)
..+++ +.+|++||-|-...|=..||...| .|....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 46776 579999999999888889999999 887643
No 156
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=38.64 E-value=28 Score=29.49 Aligned_cols=55 Identities=22% Similarity=0.349 Sum_probs=30.2
Q ss_pred EEEEEeCCCCCc---eEEeccccCCCC---CCCCCCcccCCCCCCCCeEEEEEEE--CCCcee
Q 009149 70 IINVFNSLDEPF---LLSWNGIQNRRN---SFEDGVYGTTCPIPPGKNFTYILQV--KDQIGS 124 (542)
Q Consensus 70 ~i~v~N~l~~~~---~iH~HG~~~~~~---~~~DGv~~~q~~i~pG~~~~Y~f~~--~~~~Gt 124 (542)
.|++.|..+.+. +=||.=....+. -.-+||-|-|.-|.||++|+|.=-. +.+.|+
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtSg~~L~Tp~G~ 100 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTSGCPLPTPIGT 100 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEEEEEESSSEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcCCcCcCCCceE
Confidence 477788776654 457753321111 0124444436669999988885432 334554
No 157
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=36.15 E-value=52 Score=27.28 Aligned_cols=61 Identities=21% Similarity=0.287 Sum_probs=34.9
Q ss_pred ceEEEecCCEEEEEEE---eCCCCCceEEe----ccccCCC-CCCCCCCc-ccCCCCCCCCeEEEEEEEC
Q 009149 59 PDIHSVTNDNLIINVF---NSLDEPFLLSW----NGIQNRR-NSFEDGVY-GTTCPIPPGKNFTYILQVK 119 (542)
Q Consensus 59 P~i~v~~Gd~v~i~v~---N~l~~~~~iH~----HG~~~~~-~~~~DGv~-~~q~~i~pG~~~~Y~f~~~ 119 (542)
+.=.++.|..+.|.+. |.......... -|+..+. .+..|+=- ++.|||.+|+.++|.+.++
T Consensus 26 ~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 26 QPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp SSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 4456777888877776 22212222222 3433321 12234432 3479999999999998874
No 158
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=35.37 E-value=25 Score=29.61 Aligned_cols=55 Identities=22% Similarity=0.340 Sum_probs=30.3
Q ss_pred EEEEEeCCCCCc---eEEeccccCCCC---CCCCCCcccCCCCCCCCeEEEEEEE--CCCcee
Q 009149 70 IINVFNSLDEPF---LLSWNGIQNRRN---SFEDGVYGTTCPIPPGKNFTYILQV--KDQIGS 124 (542)
Q Consensus 70 ~i~v~N~l~~~~---~iH~HG~~~~~~---~~~DGv~~~q~~i~pG~~~~Y~f~~--~~~~Gt 124 (542)
.|++.|..+.+. +=||-=....+. -.-+||-|-|.-|.||++|+|.=-. ..+.|+
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtSg~~L~Tp~G~ 95 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSGTVLDTPFGI 95 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEEEEEESSSEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcCCcCcCCCceE
Confidence 477788776554 457753321111 1124444446679999988885432 334554
No 159
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=35.15 E-value=80 Score=29.02 Aligned_cols=76 Identities=12% Similarity=-0.044 Sum_probs=50.4
Q ss_pred cceEEEecCCEEEEEEEeCCCCCceEEeccccCCCCCCCCCCcccCCCCCCCCeEEEEEEECCCceeeeEecchh-hhhh
Q 009149 58 GPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLA-FHKA 136 (542)
Q Consensus 58 gP~i~v~~Gd~v~i~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~~q~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~ 136 (542)
...+.+..|..|++.++.. +.-++...-.+. ..+| .-||..-...|. ++++|+|+..|..= +...
T Consensus 139 dn~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg----~K~D--------aiPGr~n~~~~~-~~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSE-DVLHSWAVPSLG----LKTD--------AIPGRLNQTTLM-SSRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SSCEEEETTSCEEEEEEES-SSCEEEEEGGGT----EEEE--------ECTTCCEEEEEC-CSSCEEEEECCCSCCSTTG
T ss_pred CceEEEecCCEEEEEEEeC-cccceeeecccC----cEEE--------ecCCceEEEEEe-cCCcEEEEEEehhhccccc
Confidence 3579999999999999986 333333333221 1233 457888888888 58899999999831 2222
Q ss_pred cceeeEEEEeC
Q 009149 137 AGGFGGIRILS 147 (542)
Q Consensus 137 ~Gl~G~liV~~ 147 (542)
.-|.+.+.+.+
T Consensus 205 s~M~~~v~vv~ 215 (227)
T 1v54_B 205 SFMPIVLELVP 215 (227)
T ss_dssp GGCCEEEEEEC
T ss_pred ccCeEEEEEEc
Confidence 23667776665
No 160
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=31.80 E-value=57 Score=27.52 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=28.9
Q ss_pred EEe-cCceeeEEEeechhhhhcceEEEEEEecCCc
Q 009149 483 IAL-DNVGMWNLRSESWARQYLGQQFYLRVYTAST 516 (542)
Q Consensus 483 f~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 516 (542)
|.. +.+|.+.|=|=...|=..||-+.+.|.....
T Consensus 77 v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 77 IERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp EEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred EEeccCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 555 7899999999999999999999999976543
No 161
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=31.22 E-value=1.8e+02 Score=28.48 Aligned_cols=31 Identities=19% Similarity=0.129 Sum_probs=25.5
Q ss_pred eeeEEEcCCceEEEEEEeCC-----CCcceEEEEee
Q 009149 249 YSSLDVHVGQSYSVLVTADQ-----PARDYYIVVSS 279 (542)
Q Consensus 249 ~~~l~l~pgeR~dv~v~~~~-----~~g~y~i~~~~ 279 (542)
-+-+.|+|||.+++.|++.. .+|.|.++...
T Consensus 92 d~f~~L~pG~Sve~~~dla~~ydLs~gG~y~v~~~g 127 (343)
T 2x3c_A 92 KDFQLLKAGQSLTVQAEVSGLYDMSAQGQYSIRYQL 127 (343)
T ss_dssp GGEEEECTTCEEEEEEECTTTBTCCSCEEEEEEEC-
T ss_pred hhcEEeCCCCeEEEEEehhhccccCCCceEEEEEee
Confidence 46789999999999999864 46899998864
No 162
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=31.11 E-value=1.5e+02 Score=25.99 Aligned_cols=85 Identities=8% Similarity=-0.047 Sum_probs=49.4
Q ss_pred eEEEcCCCCCceEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccceee----eeeE--E-EcCCceEEEEE
Q 009149 192 GILINGRGSGAAFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTT----YSSL--D-VHVGQSYSVLV 264 (542)
Q Consensus 192 ~~liNG~~~~~~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~----~~~l--~-l~pgeR~dv~v 264 (542)
..+.|..+. +.-.+..|+.++||+--......-.+.+ -|.+-..+|..+-... ...+ . +.+|+.+.+.+
T Consensus 53 v~l~d~~G~-~~~~~~~Ge~v~l~i~~~~~~~i~~~v~---G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v~f 128 (188)
T 2r5o_A 53 YHIQSAGVD-FPPSLTGNQQTDFLMKVVFEYDFDCVVP---GILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVFKF 128 (188)
T ss_dssp EEEEETTEE-SCSSEETTCEEEEEEEEEESSCEEEEEE---EEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEEEE
T ss_pred EEEEECCCC-EeeEEeCCCEEEEEEEEEECCcCCccEE---EEEEECCCCCEEEecCcccccccccccccCCCCEEEEEE
Confidence 445565554 5556789999888876655443322222 2445555666552211 0112 3 68899766655
Q ss_pred EeCC--CCcceEEEEeee
Q 009149 265 TADQ--PARDYYIVVSSR 280 (542)
Q Consensus 265 ~~~~--~~g~y~i~~~~~ 280 (542)
.++- .+|.|.+.+...
T Consensus 129 ~f~l~L~~G~Y~lsv~i~ 146 (188)
T 2r5o_A 129 SLPVDLNSGDYLLSFGIS 146 (188)
T ss_dssp EEECCBCSEEEEEEEEEE
T ss_pred EEecccCCCeEEEEEEEe
Confidence 5542 689999988643
No 163
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=29.62 E-value=51 Score=26.88 Aligned_cols=34 Identities=18% Similarity=0.111 Sum_probs=27.9
Q ss_pred EEEecCceeeEEEeechhhhhcceEEEE-EEecCC
Q 009149 482 YIALDNVGMWNLRSESWARQYLGQQFYL-RVYTAS 515 (542)
Q Consensus 482 rf~adnpG~w~~HCHil~H~d~GMm~~~-~V~~~~ 515 (542)
.|..+.+|.+.|=|=...|=..||-+.+ .|..+.
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 4566889999999999999999999999 776543
No 164
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=26.88 E-value=3e+02 Score=25.86 Aligned_cols=71 Identities=8% Similarity=0.022 Sum_probs=41.7
Q ss_pred EEEecCcEE-------EEEEEEcCCCceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCCCCcceEEE
Q 009149 204 FNVEQGKTY-------RLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIV 276 (542)
Q Consensus 204 ~~v~~G~~~-------rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~ 276 (542)
+++++|+.+ -+=|||.+... .+.++|..+..++.--....-..-+.|.|..|. +|.|++. .++.+.+-
T Consensus 34 ~~L~~Ge~~~~~~~~~E~~iv~l~G~~--~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~--~v~i~a~-~~~~~~v~ 108 (270)
T 2qjv_A 34 WQLXAGESITLPSDERERCLVLVAGLA--SVXAADSFFYRIGQRMSPFERIPAYSVYLPHHT--EAXVTAE-TDLELAVC 108 (270)
T ss_dssp EEECTTCEEEECCSSEEEEEEEEESCE--EEEETTEEEEEECCCSSGGGCSCCCEEEECSSC--CEEEEES-SSEEEEEE
T ss_pred EEecCCCEEEecCCCcEEEEEEecceE--EEEECCEEEeccccccccccCCCCcEEEECCCC--EEEEEec-CCceEEEE
Confidence 444555544 45577777633 567788777765322111222224789999999 5556665 35677666
Q ss_pred Eee
Q 009149 277 VSS 279 (542)
Q Consensus 277 ~~~ 279 (542)
...
T Consensus 109 sAp 111 (270)
T 2qjv_A 109 SAP 111 (270)
T ss_dssp EEE
T ss_pred eee
Confidence 553
No 165
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=26.65 E-value=1.3e+02 Score=29.88 Aligned_cols=75 Identities=21% Similarity=0.317 Sum_probs=0.0
Q ss_pred EEEEEEEeCCCCCc--------eEEeccccCCCCC--CCC------CCccc-CCCCCCCCeEEEEEEECCCc--------
Q 009149 68 NLIINVFNSLDEPF--------LLSWNGIQNRRNS--FED------GVYGT-TCPIPPGKNFTYILQVKDQI-------- 122 (542)
Q Consensus 68 ~v~i~v~N~l~~~~--------~iH~HG~~~~~~~--~~D------Gv~~~-q~~i~pG~~~~Y~f~~~~~~-------- 122 (542)
++.++|+|+.+++. +++|=.-.+.... +.| |.- . . ||+|||+.+.+..+.+.+
T Consensus 301 ~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a~da~WeveRL~~ 378 (419)
T 3rfr_A 301 TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKIQDARWDIERLSD 378 (419)
T ss_dssp EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEEECHHHHHTTGGG
T ss_pred EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEeehHHHHHHHHhh
Q ss_pred ----------eeeeEecchhhhhhcceeeEEE
Q 009149 123 ----------GSFYYFPSLAFHKAAGGFGGIR 144 (542)
Q Consensus 123 ----------Gt~wYH~H~~~q~~~Gl~G~li 144 (542)
|..++.+-.+..+..-+.|++|
T Consensus 379 l~~D~dSrfgGLLfF~d~~G~r~i~~I~~pvI 410 (419)
T 3rfr_A 379 LAYDTDSQVGGLLFFFTPDGKRFAAEIGGPVI 410 (419)
T ss_dssp GGGSSSCEEEEEEEEECSSSCEEEEEEEEECE
T ss_pred hhcCchhheeEEEEEEcCCCCEEEEeccCccc
No 166
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=26.28 E-value=83 Score=24.91 Aligned_cols=51 Identities=14% Similarity=0.065 Sum_probs=33.4
Q ss_pred EEEEEEEeCCCCC---ceEEeccccCCCCCCCCCCccc-CCCCCCCCeEEEEEEE-CCCcee
Q 009149 68 NLIINVFNSLDEP---FLLSWNGIQNRRNSFEDGVYGT-TCPIPPGKNFTYILQV-KDQIGS 124 (542)
Q Consensus 68 ~v~i~v~N~l~~~---~~iH~HG~~~~~~~~~DGv~~~-q~~i~pG~~~~Y~f~~-~~~~Gt 124 (542)
.+.|.++|-|+.+ ..++.-|. .-..+ --+ ...|.||++..+++.. |..+|.
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~-----GL~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGS-----GLQRP-KILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEET-----TTEEE-EEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEECCCCCcccCEEEEEECC-----CCCcc-eEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 5678899999765 35666663 12222 112 3569999999998887 345665
No 167
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=26.14 E-value=2.7e+02 Score=22.81 Aligned_cols=65 Identities=12% Similarity=0.102 Sum_probs=43.4
Q ss_pred EEecCcEE--EEEEEEcCCCceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCC-CCcceEEEEe
Q 009149 205 NVEQGKTY--RLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ-PARDYYIVVS 278 (542)
Q Consensus 205 ~v~~G~~~--rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~-~~g~y~i~~~ 278 (542)
.+.+|+.+ +..+-|.|....-.+.+ .+ -.||..+. ...+.|++|+.-.|.+.... .+|.|.|.+.
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~l-yvng~~v~---t~~v~La~G~s~tv~f~~~~~~~G~~~v~Av 95 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RV-YINGTLYK---NWTVSLGPKEEKVLTFNWTPTQEGMYRINAT 95 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EE-EETTEEEE---EEEEEECTTCEEEEEEEECCSSCEEEEEEEE
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EE-EECCEEEe---eEEeccCCCCeEEEEEEEEcCCCcEEEEEEE
Confidence 67788866 56688999766433332 22 23666443 23457999999888888653 4788888875
No 168
>2yev_B Cytochrome C oxidase subunit 2; electron transport; HET: FME 5PL HAS 4AG 7E8 HEC 7E9; 2.36A {Thermus thermophilus}
Probab=31.43 E-value=15 Score=36.30 Aligned_cols=76 Identities=17% Similarity=0.268 Sum_probs=52.9
Q ss_pred EeccCCcEEEEEEEcCCCCCCCeeecCcceEEEeecCCCCCCcCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCceeeE
Q 009149 413 MGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWN 492 (542)
Q Consensus 413 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~ 492 (542)
+.++.|+.|++.+.+.+ ..| .|+|-+-+. ..|. -||....+.|.++.||.|.
T Consensus 143 l~~P~~~~v~~~~ts~D-ViH-------sf~vp~~~~-----------------k~d~---~PG~~~~~~~~~~~~G~y~ 194 (337)
T 2yev_B 143 LVLPAGVPVELEITSKD-VIH-------SFWVPGLAG-----------------KRDA---IPGQTTRISFEPKEPGLYY 194 (337)
Confidence 67899999999988764 434 566655442 1232 2567778899999999999
Q ss_pred EEeechhhh-hcceEEEEEEecCCc
Q 009149 493 LRSESWARQ-YLGQQFYLRVYTAST 516 (542)
Q Consensus 493 ~HCHil~H~-d~GMm~~~~V~~~~~ 516 (542)
..|--+-.. |..|...+++..+++
T Consensus 195 g~c~e~cG~~Hs~M~~~v~~vs~~~ 219 (337)
T 2yev_B 195 GFCAELCGASHARMLFRVVVLPKEE 219 (337)
Confidence 999876544 455666666666654
No 169
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=25.02 E-value=79 Score=30.67 Aligned_cols=59 Identities=10% Similarity=0.095 Sum_probs=42.7
Q ss_pred eEEEecCcEEEEEEEEcCCCceEEEEEecceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCCCCcceEEEEeee
Q 009149 203 AFNVEQGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVVSSR 280 (542)
Q Consensus 203 ~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 280 (542)
.+.+..|+.+||++-.. .-.|.|.+.....++ ..-||..-.+.+.++ .+|.|...|+..
T Consensus 152 ~l~lP~g~~V~~~lTS~--DViHsf~IP~lg~k~----------------DaiPGr~n~~~~~~~-~~G~y~g~CsE~ 210 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSN--SVMNSFFIPRLGSQI----------------YAMAGMQTRLHLIAN-EPGTYDGISASY 210 (315)
T ss_dssp BCCCCSSSEEEEEECBS--SSCEEEEEGGGTEEE----------------EECBTSCEEEEEECC-SCBCCEEBCCSC
T ss_pred eEEEeCCCEEEEEEEeC--CccceeeecccCcEE----------------eecCCcceeeEEecC-CCeEEEEecccc
Confidence 46778999999888644 446777776654433 345677777778787 799999999754
No 170
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=24.69 E-value=2.4e+02 Score=21.65 Aligned_cols=68 Identities=13% Similarity=0.128 Sum_probs=35.9
Q ss_pred EecCcEEEEEEEEcCCCceEEEEEec--ceeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCC--CCcceEEEEee
Q 009149 206 VEQGKTYRLRISNVGLQNSLNFRIQN--HKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQ--PARDYYIVVSS 279 (542)
Q Consensus 206 v~~G~~~rlRliNa~~~~~~~~~i~g--h~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~--~~g~y~i~~~~ 279 (542)
-++|+++++|++-...... . ..+ -.+++..-+|..+.- ..+.......++.-+.+++ ..|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~~-p--~~~~~~~v~l~dp~g~~v~~---~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFH-P--LNELIPLVYIQDPKGNRIAQ---WQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGGC-B--CCCEEEEEEEECTTSCEEEE---EEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCCc-C--CCCCceEEEEECCCCCEEEE---EEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 4799999999775533211 1 111 134455555543321 1122223345666666654 45899998863
No 171
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=24.48 E-value=75 Score=25.51 Aligned_cols=39 Identities=15% Similarity=0.249 Sum_probs=0.0
Q ss_pred EEEEEECCCceeeeEecchhhhhhcceeeEEEEeCCCCCC
Q 009149 113 TYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIP 152 (542)
Q Consensus 113 ~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~ 152 (542)
...+++ +.+|++||-|-...|=..||...|.|.......
T Consensus 71 ~~~v~L-~~~G~~yFic~~~gHC~~GmKl~I~V~~~~s~~ 109 (109)
T 1ws8_A 71 ADSIPL-KRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSSA 109 (109)
T ss_dssp EEEEEC-CSSEEEEEECCSTTTTTTTCEEEEEECC-----
T ss_pred CEEEEE-CCCcCEEEECCCCCcccCCCEEEEEEcCCCCCC
No 172
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=24.20 E-value=24 Score=29.45 Aligned_cols=23 Identities=22% Similarity=0.241 Sum_probs=18.9
Q ss_pred ceEEEecCcEEEEEEEEcCCCce
Q 009149 202 AAFNVEQGKTYRLRISNVGLQNS 224 (542)
Q Consensus 202 ~~~~v~~G~~~rlRliNa~~~~~ 224 (542)
-.|+|+.||++||.+.|-+-...
T Consensus 71 k~InV~~GETVrF~v~nkt~~W~ 93 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIVAWT 93 (131)
T ss_dssp CEEEEETTCEEEEEETTEEEEEE
T ss_pred eEEEecCCCEEEEEeCCcEEEEE
Confidence 45999999999999988776443
No 173
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=20.15 E-value=2.2e+02 Score=21.54 Aligned_cols=45 Identities=11% Similarity=0.120 Sum_probs=31.8
Q ss_pred eeEEEeecCcccceeeeeeEEEcCCceEEEEEEeCCCCcceEEEE
Q 009149 233 KMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPARDYYIVV 277 (542)
Q Consensus 233 ~~~via~DG~~~~p~~~~~l~l~pgeR~dv~v~~~~~~g~y~i~~ 277 (542)
.++|+..||.|++-..++-=.+.-+|-|.+.....+..|.+.|.+
T Consensus 4 ~v~V~d~~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~~ 48 (82)
T 3e8v_A 4 SVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTA 48 (82)
T ss_dssp EEEEECTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEEC
T ss_pred EEEEEcCCCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEEEE
Confidence 467888888888766666555556777777776665667776665
Done!