Query 009150
Match_columns 542
No_of_seqs 242 out of 823
Neff 5.0
Searched_HMMs 46136
Date Thu Mar 28 21:01:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009150.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009150hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2043 Signaling protein SWIF 99.8 1.7E-20 3.7E-25 214.5 14.7 383 144-541 343-797 (896)
2 COG1246 ArgA N-acetylglutamate 99.6 1.3E-15 2.9E-20 142.4 5.7 121 87-219 3-124 (153)
3 KOG4362 Transcriptional regula 99.5 7.8E-14 1.7E-18 154.9 10.2 143 391-539 471-620 (684)
4 PRK07757 acetyltransferase; Pr 99.4 6.3E-13 1.4E-17 120.6 8.0 92 140-237 48-149 (152)
5 PF00583 Acetyltransf_1: Acety 99.3 5.2E-12 1.1E-16 102.5 8.7 75 140-214 3-83 (83)
6 PF13508 Acetyltransf_7: Acety 99.2 2.9E-11 6.2E-16 99.2 7.2 70 140-215 10-79 (79)
7 PF00533 BRCT: BRCA1 C Terminu 99.2 1.2E-10 2.5E-15 94.3 9.3 71 396-467 6-78 (78)
8 PRK07922 N-acetylglutamate syn 99.2 6.3E-11 1.4E-15 111.8 7.2 85 140-228 53-145 (169)
9 PTZ00330 acetyltransferase; Pr 99.1 2.8E-10 6E-15 102.0 8.7 79 140-218 59-141 (147)
10 cd00027 BRCT Breast Cancer Sup 99.1 4.9E-10 1.1E-14 86.8 8.7 70 399-468 2-72 (72)
11 PLN02825 amino-acid N-acetyltr 99.1 2.4E-10 5.2E-15 125.7 9.0 139 69-219 353-491 (515)
12 KOG1472 Histone acetyltransfer 99.1 1.9E-11 4.1E-16 137.1 0.4 122 87-221 386-508 (720)
13 PRK10146 aminoalkylphosphonic 99.1 2.4E-10 5.2E-15 102.0 7.3 78 140-217 54-137 (144)
14 TIGR01890 N-Ac-Glu-synth amino 99.0 4.5E-10 9.8E-15 120.7 9.2 78 140-219 329-406 (429)
15 PRK10314 putative acyltransfer 99.0 5.6E-10 1.2E-14 104.0 7.5 80 140-219 55-135 (153)
16 PLN02706 glucosamine 6-phospha 99.0 1.1E-09 2.3E-14 99.2 9.2 78 140-217 62-143 (150)
17 PRK13688 hypothetical protein; 99.0 1E-09 2.2E-14 103.4 9.0 122 71-219 2-134 (156)
18 PF13673 Acetyltransf_10: Acet 99.0 8.8E-10 1.9E-14 94.8 6.7 67 140-213 51-117 (117)
19 TIGR02406 ectoine_EctA L-2,4-d 99.0 4.1E-09 8.9E-14 98.0 10.6 89 140-228 47-143 (157)
20 PF12738 PTCB-BRCT: twin BRCT 99.0 8.4E-10 1.8E-14 87.9 5.0 62 399-462 1-63 (63)
21 PRK12308 bifunctional arginino 98.9 2.2E-09 4.8E-14 120.5 8.7 76 140-219 510-585 (614)
22 smart00292 BRCT breast cancer 98.9 6.2E-09 1.3E-13 82.4 8.7 73 397-470 4-80 (80)
23 PHA00673 acetyltransferase dom 98.9 6E-09 1.3E-13 98.4 9.4 79 140-218 62-146 (154)
24 TIGR02382 wecD_rffC TDP-D-fuco 98.9 5E-09 1.1E-13 100.0 8.9 78 140-219 106-186 (191)
25 PRK03624 putative acetyltransf 98.9 5.3E-09 1.2E-13 91.4 8.2 77 140-219 52-131 (140)
26 cd02169 Citrate_lyase_ligase C 98.9 2.9E-09 6.4E-14 110.0 7.5 73 140-219 13-85 (297)
27 PF13527 Acetyltransf_9: Acety 98.9 7.1E-09 1.5E-13 91.0 8.6 74 140-215 48-126 (127)
28 TIGR01575 rimI ribosomal-prote 98.9 1.3E-08 2.7E-13 88.3 10.0 78 140-220 38-118 (131)
29 PRK05279 N-acetylglutamate syn 98.9 6.5E-09 1.4E-13 112.0 9.9 78 140-219 341-418 (441)
30 TIGR03827 GNAT_ablB putative b 98.8 8.5E-09 1.8E-13 103.9 8.8 82 140-222 165-249 (266)
31 PRK09491 rimI ribosomal-protei 98.8 1.8E-08 3.9E-13 91.0 10.1 94 140-237 47-143 (146)
32 PRK10140 putative acetyltransf 98.8 1.8E-08 3.9E-13 91.3 9.2 96 140-237 58-159 (162)
33 PRK10975 TDP-fucosamine acetyl 98.8 2E-08 4.3E-13 95.9 9.4 78 140-219 109-189 (194)
34 COG0456 RimI Acetyltransferase 98.8 2.2E-08 4.7E-13 92.3 8.2 78 143-220 72-156 (177)
35 PF13420 Acetyltransf_4: Acety 98.7 5.9E-08 1.3E-12 87.8 9.5 82 140-222 58-143 (155)
36 TIGR00124 cit_ly_ligase [citra 98.7 4.4E-08 9.6E-13 102.8 7.8 73 140-219 38-110 (332)
37 TIGR03448 mycothiol_MshD mycot 98.7 7.7E-08 1.7E-12 96.7 9.0 78 141-218 208-288 (292)
38 COG3153 Predicted acetyltransf 98.6 2.1E-07 4.5E-12 89.4 9.5 114 119-240 34-152 (171)
39 PRK09831 putative acyltransfer 98.6 8.9E-08 1.9E-12 87.2 6.5 83 140-237 60-142 (147)
40 PRK15130 spermidine N1-acetylt 98.5 3.4E-07 7.3E-12 86.2 8.4 100 141-242 65-169 (186)
41 TIGR03103 trio_acet_GNAT GNAT- 98.5 3.7E-07 8.1E-12 101.5 8.8 80 140-219 132-218 (547)
42 KOG3139 N-acetyltransferase [G 98.4 1.6E-06 3.4E-11 82.3 11.0 122 88-220 23-148 (165)
43 TIGR01686 FkbH FkbH-like domai 98.4 1.1E-06 2.5E-11 91.0 10.8 73 141-216 242-319 (320)
44 PF08445 FR47: FR47-like prote 98.4 8.6E-07 1.9E-11 75.4 8.1 60 159-218 21-82 (86)
45 KOG3396 Glucosamine-phosphate 98.4 3.2E-07 7E-12 84.9 5.2 78 140-217 62-143 (150)
46 PRK10151 ribosomal-protein-L7/ 98.4 1.1E-06 2.4E-11 82.2 8.9 95 141-237 75-173 (179)
47 PF13302 Acetyltransf_3: Acety 98.4 2.1E-06 4.6E-11 75.9 10.0 74 140-214 65-142 (142)
48 cd04301 NAT_SF N-Acyltransfera 98.4 1.7E-06 3.6E-11 64.0 7.6 58 141-198 7-64 (65)
49 TIGR01211 ELP3 histone acetylt 98.3 1.3E-06 2.9E-11 96.7 9.3 88 129-218 412-516 (522)
50 PRK10809 ribosomal-protein-S5- 98.3 2.4E-06 5.3E-11 81.0 9.9 96 140-237 84-184 (194)
51 PRK10514 putative acetyltransf 98.3 8.2E-07 1.8E-11 79.7 6.2 70 140-219 57-127 (145)
52 KOG3216 Diamine acetyltransfer 98.3 5.5E-06 1.2E-10 78.2 11.8 136 73-218 4-146 (163)
53 PHA01807 hypothetical protein 98.3 1.9E-06 4.2E-11 81.1 8.6 70 140-210 60-135 (153)
54 KOG3548 DNA damage checkpoint 98.3 1.1E-06 2.5E-11 100.2 8.0 138 398-540 928-1103(1176)
55 TIGR03448 mycothiol_MshD mycot 98.3 1.1E-06 2.4E-11 88.4 6.8 76 140-219 53-129 (292)
56 TIGR03585 PseH pseudaminic aci 98.3 3E-06 6.5E-11 76.6 8.9 84 140-225 58-145 (156)
57 KOG3397 Acetyltransferases [Ge 98.3 3E-06 6.5E-11 81.5 8.9 122 88-219 21-142 (225)
58 PRK01346 hypothetical protein; 98.3 2.6E-06 5.7E-11 90.5 8.8 78 140-219 54-137 (411)
59 PRK10562 putative acetyltransf 98.2 2.6E-06 5.6E-11 77.2 7.0 70 141-219 56-126 (145)
60 KOG3226 DNA repair protein [Re 98.2 1.7E-06 3.7E-11 90.9 5.3 87 396-484 318-405 (508)
61 KOG2488 Acetyltransferase (GNA 98.1 5.2E-06 1.1E-10 80.8 7.1 78 142-219 102-183 (202)
62 PF14542 Acetyltransf_CG: GCN5 98.0 1.5E-05 3.2E-10 67.1 7.4 67 140-211 6-72 (78)
63 PF13523 Acetyltransf_8: Acety 98.0 2.8E-05 6.1E-10 70.7 8.7 80 140-219 55-142 (152)
64 COG3393 Predicted acetyltransf 97.9 2.8E-05 6.1E-10 79.1 7.4 78 140-219 184-263 (268)
65 KOG1929 Nucleotide excision re 97.9 4.2E-05 9.1E-10 88.3 9.2 127 396-541 10-137 (811)
66 PLN03122 Poly [ADP-ribose] pol 97.9 4.3E-05 9.3E-10 88.5 9.1 86 395-481 189-278 (815)
67 PF13718 GNAT_acetyltr_2: GNAT 97.8 3.8E-05 8.2E-10 75.5 6.7 76 158-237 89-192 (196)
68 COG2153 ElaA Predicted acyltra 97.8 4E-05 8.6E-10 72.0 6.5 77 141-219 58-137 (155)
69 COG1247 Sortase and related ac 97.8 0.00013 2.8E-09 70.3 9.9 97 139-237 59-161 (169)
70 COG1670 RimL Acetyltransferase 97.8 0.00016 3.4E-09 65.9 9.4 86 141-227 76-167 (187)
71 PLN03123 poly [ADP-ribose] pol 97.6 0.00011 2.3E-09 86.9 8.2 88 394-482 392-482 (981)
72 COG3053 CitC Citrate lyase syn 97.6 0.00024 5.3E-09 73.4 8.2 82 127-219 35-116 (352)
73 KOG1929 Nucleotide excision re 97.5 0.00042 9.2E-09 80.2 10.9 141 396-539 104-271 (811)
74 COG0454 WecD Histone acetyltra 97.4 0.00016 3.4E-09 56.4 3.6 44 165-213 87-130 (156)
75 COG2388 Predicted acetyltransf 97.3 0.00037 8E-09 61.7 5.2 60 140-201 22-81 (99)
76 KOG3138 Predicted N-acetyltran 97.2 0.00042 9.1E-09 67.7 5.4 79 141-219 63-153 (187)
77 KOG3235 Subunit of the major N 96.9 0.0022 4.7E-08 61.4 6.6 126 87-220 4-137 (193)
78 COG1444 Predicted P-loop ATPas 96.9 0.00077 1.7E-08 77.5 4.3 72 161-237 533-607 (758)
79 KOG3524 Predicted guanine nucl 96.9 0.001 2.3E-08 75.0 4.8 122 397-539 120-242 (850)
80 KOG3234 Acetyltransferase, (GN 96.8 0.0033 7.2E-08 60.0 7.1 81 139-219 48-132 (173)
81 PF12568 DUF3749: Acetyltransf 96.5 0.035 7.5E-07 51.4 11.1 107 89-218 12-125 (128)
82 COG3981 Predicted acetyltransf 96.1 0.014 3E-07 56.5 6.6 73 140-212 76-153 (174)
83 COG4552 Eis Predicted acetyltr 96.1 0.0088 1.9E-07 63.5 5.4 58 158-217 69-126 (389)
84 PRK06195 DNA polymerase III su 95.8 0.035 7.5E-07 57.9 8.7 73 395-467 220-306 (309)
85 KOG0966 ATP-dependent DNA liga 95.8 0.022 4.7E-07 65.7 7.6 76 402-478 641-719 (881)
86 PRK06063 DNA polymerase III su 95.6 0.037 8E-07 58.0 8.0 70 397-467 234-305 (313)
87 PRK14351 ligA NAD-dependent DN 95.4 0.055 1.2E-06 62.5 9.2 75 395-469 609-684 (689)
88 COG1243 ELP3 Histone acetyltra 95.4 0.015 3.3E-07 63.6 4.4 50 168-217 459-508 (515)
89 PF12746 GNAT_acetyltran: GNAT 95.4 0.059 1.3E-06 55.5 8.3 75 141-218 173-247 (265)
90 PF00533 BRCT: BRCA1 C Terminu 95.4 0.026 5.6E-07 45.3 4.5 38 504-541 2-39 (78)
91 PRK07956 ligA NAD-dependent DN 95.2 0.074 1.6E-06 61.3 9.1 74 396-470 591-665 (665)
92 cd04264 DUF619-NAGS DUF619 dom 94.7 0.036 7.8E-07 49.1 4.0 72 143-214 18-94 (99)
93 PF06852 DUF1248: Protein of u 94.7 0.2 4.4E-06 49.0 9.4 91 124-218 41-137 (181)
94 TIGR00575 dnlj DNA ligase, NAD 94.7 0.073 1.6E-06 61.2 7.4 66 396-462 585-651 (652)
95 PRK14350 ligA NAD-dependent DN 94.6 0.11 2.4E-06 59.9 8.5 71 396-467 594-665 (669)
96 KOG4144 Arylalkylamine N-acety 94.5 0.035 7.6E-07 53.2 3.6 68 160-227 102-173 (190)
97 COG0272 Lig NAD-dependent DNA 94.2 0.14 3.1E-06 58.5 8.3 72 394-466 593-665 (667)
98 smart00292 BRCT breast cancer 94.1 0.1 2.2E-06 40.8 4.9 36 506-541 1-37 (80)
99 PF08444 Gly_acyl_tr_C: Aralky 93.9 0.072 1.5E-06 46.5 4.0 60 157-216 17-78 (89)
100 COG5628 Predicted acetyltransf 93.8 0.15 3.2E-06 47.1 6.0 84 141-227 45-134 (143)
101 COG3818 Predicted acetyltransf 93.6 0.2 4.3E-06 47.0 6.6 62 158-219 83-149 (167)
102 KOG2481 Protein required for n 93.6 0.086 1.9E-06 58.4 4.7 77 398-482 330-417 (570)
103 KOG4135 Predicted phosphogluco 93.0 0.19 4.1E-06 48.1 5.5 61 158-218 106-170 (185)
104 KOG0323 TFIIF-interacting CTD 92.8 0.049 1.1E-06 62.1 1.5 88 396-484 442-534 (635)
105 KOG2535 RNA polymerase II elon 92.7 0.12 2.5E-06 55.2 4.1 92 124-217 436-546 (554)
106 cd04265 DUF619-NAGS-U DUF619 d 92.6 0.12 2.5E-06 45.9 3.4 57 158-214 33-94 (99)
107 PF01233 NMT: Myristoyl-CoA:pr 92.0 0.48 1.1E-05 45.6 6.9 57 140-196 86-147 (162)
108 COG5163 NOP7 Protein required 91.8 0.17 3.7E-06 54.7 4.0 77 398-482 353-441 (591)
109 TIGR03694 exosort_acyl putativ 91.0 1.1 2.4E-05 45.4 8.8 60 157-216 109-196 (241)
110 PF13480 Acetyltransf_6: Acety 90.0 1.2 2.7E-05 38.9 7.2 57 140-199 78-134 (142)
111 cd00027 BRCT Breast Cancer Sup 88.8 0.73 1.6E-05 35.0 4.3 32 510-541 1-33 (72)
112 PRK13834 putative autoinducer 87.7 4.2 9E-05 40.4 9.9 62 156-217 96-164 (207)
113 COG5275 BRCT domain type II [G 87.7 2.2 4.7E-05 43.2 7.8 72 394-465 155-227 (276)
114 KOG2036 Predicted P-loop ATPas 85.0 0.67 1.5E-05 53.5 3.0 31 160-190 615-645 (1011)
115 PF04377 ATE_C: Arginine-tRNA- 84.1 3 6.4E-05 38.7 6.3 56 140-198 46-101 (128)
116 KOG3524 Predicted guanine nucl 79.8 1.2 2.5E-05 51.4 2.4 93 390-484 205-297 (850)
117 cd03173 DUF619-like DUF619 dom 77.2 3.5 7.5E-05 36.7 4.1 59 156-214 30-93 (98)
118 KOG0966 ATP-dependent DNA liga 76.3 2 4.4E-05 50.2 3.0 74 404-478 795-880 (881)
119 PF00765 Autoind_synth: Autoin 73.0 8.1 0.00018 37.7 5.9 78 141-218 53-155 (182)
120 PRK01305 arginyl-tRNA-protein 71.2 14 0.0003 37.8 7.3 56 140-198 151-206 (240)
121 COG5163 NOP7 Protein required 70.4 3.3 7.1E-05 45.2 2.7 34 505-540 348-381 (591)
122 PRK06063 DNA polymerase III su 69.1 6.4 0.00014 41.4 4.6 37 505-541 230-266 (313)
123 KOG2481 Protein required for n 68.5 3.6 7.7E-05 46.1 2.6 34 505-540 325-358 (570)
124 TIGR03827 GNAT_ablB putative b 68.5 6.7 0.00015 39.7 4.5 47 174-220 20-66 (266)
125 PF05301 Mec-17: Touch recepto 68.4 29 0.00064 32.1 8.0 41 162-205 49-89 (120)
126 PF13880 Acetyltransf_13: ESCO 65.8 6 0.00013 33.2 2.8 27 162-188 8-34 (70)
127 KOG2696 Histone acetyltransfer 64.1 33 0.00072 37.4 8.6 99 124-227 177-281 (403)
128 PF02474 NodA: Nodulation prot 63.1 8.2 0.00018 38.0 3.6 57 158-215 84-143 (196)
129 KOG2779 N-myristoyl transferas 61.6 22 0.00048 38.6 6.8 55 141-195 144-203 (421)
130 PF12738 PTCB-BRCT: twin BRCT 59.5 8.3 0.00018 30.3 2.5 30 512-541 2-31 (63)
131 PF04768 DUF619: Protein of un 58.8 17 0.00037 35.2 5.0 72 112-190 48-119 (170)
132 COG3375 Uncharacterized conser 57.9 22 0.00048 36.5 5.7 62 140-202 54-116 (266)
133 PF01853 MOZ_SAS: MOZ/SAS fami 57.7 27 0.00059 34.6 6.2 37 156-193 78-114 (188)
134 COG3882 FkbH Predicted enzyme 55.6 9.6 0.00021 42.8 3.0 74 141-217 471-549 (574)
135 TIGR03019 pepcterm_femAB FemAB 54.7 36 0.00077 35.5 7.0 99 116-219 181-282 (330)
136 PRK06195 DNA polymerase III su 54.4 16 0.00034 38.3 4.2 36 506-541 219-255 (309)
137 PHA02769 hypothetical protein; 53.1 14 0.0003 34.2 3.1 45 177-221 94-142 (154)
138 PRK14350 ligA NAD-dependent DN 50.0 21 0.00046 41.7 4.7 36 506-541 592-628 (669)
139 PLN03122 Poly [ADP-ribose] pol 47.3 26 0.00057 41.8 5.0 38 504-541 186-223 (815)
140 cd04266 DUF619-NAGS-FABP DUF61 47.2 67 0.0014 29.2 6.5 30 157-186 37-67 (108)
141 PRK05601 DNA polymerase III su 46.4 57 0.0012 35.7 7.0 72 396-468 295-368 (377)
142 COG3916 LasI N-acyl-L-homoseri 45.4 63 0.0014 32.6 6.6 87 140-227 60-171 (209)
143 PRK00756 acyltransferase NodA; 43.5 31 0.00067 33.9 4.0 60 158-219 84-147 (196)
144 PLN03238 probable histone acet 39.3 59 0.0013 34.4 5.6 31 162-192 158-188 (290)
145 TIGR00575 dnlj DNA ligase, NAD 39.1 38 0.00083 39.4 4.7 36 506-541 583-619 (652)
146 PRK14351 ligA NAD-dependent DN 38.4 39 0.00085 39.6 4.6 37 505-541 607-644 (689)
147 COG2935 Putative arginyl-tRNA: 37.7 1.5E+02 0.0033 30.8 8.1 56 140-198 158-213 (253)
148 PRK07956 ligA NAD-dependent DN 37.4 42 0.0009 39.2 4.6 35 507-541 590-625 (665)
149 PRK14852 hypothetical protein; 36.9 81 0.0018 38.6 6.9 78 156-237 118-196 (989)
150 PF12261 T_hemolysin: Thermost 36.5 62 0.0013 31.8 5.0 57 158-218 86-142 (179)
151 PF13444 Acetyltransf_5: Acety 35.0 70 0.0015 27.7 4.6 56 122-181 24-100 (101)
152 COG0272 Lig NAD-dependent DNA 34.9 49 0.0011 38.6 4.6 35 506-540 593-628 (667)
153 COG2898 Uncharacterized conser 34.7 2.2E+02 0.0048 32.7 9.6 103 85-198 352-456 (538)
154 COG2401 ABC-type ATPase fused 34.4 17 0.00038 40.5 0.9 64 156-219 238-309 (593)
155 PLN03239 histone acetyltransfe 32.4 73 0.0016 34.6 5.1 34 159-193 214-247 (351)
156 PTZ00064 histone acetyltransfe 29.0 77 0.0017 36.0 4.7 33 158-191 384-416 (552)
157 KOG3014 Protein involved in es 27.9 4.1E+02 0.009 27.7 9.3 98 72-189 88-213 (257)
158 PRK02983 lysS lysyl-tRNA synth 26.1 5.4E+02 0.012 32.1 11.6 58 138-198 426-483 (1094)
159 KOG3548 DNA damage checkpoint 24.4 1.5E+02 0.0033 36.1 6.2 77 398-475 1073-1160(1176)
160 PRK04531 acetylglutamate kinas 22.7 73 0.0016 34.9 3.1 57 158-214 309-370 (398)
161 PLN00104 MYST -like histone ac 22.3 80 0.0017 35.3 3.3 33 159-192 307-339 (450)
162 KOG2093 Translesion DNA polyme 22.2 1.5E+02 0.0032 36.0 5.5 116 399-521 51-175 (1016)
No 1
>KOG2043 consensus Signaling protein SWIFT and related BRCT domain proteins [Transcription; Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]
Probab=99.84 E-value=1.7e-20 Score=214.49 Aligned_cols=383 Identities=22% Similarity=0.239 Sum_probs=247.3
Q ss_pred EEEEEEeeecc-CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc---
Q 009150 144 VVAAITYQIVP-ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV--- 219 (542)
Q Consensus 144 VIg~i~~~i~~-~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~--- 219 (542)
.-+.|++..++ .+.++......++..+-+-+|+++.............+.+.+..+..+..+.||.++++....+.
T Consensus 343 ~~~~it~~~~~~~~~~~~~~~i~~~~~~~~~~~~ss~~~~~~qs~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~s~~~~e 422 (896)
T KOG2043|consen 343 NMAAITLQNFPDDQTQGNAQPIENIPSDPPQKKYSSMVTYSPQSPNEKKDSRMVQPFPIPENVNSLLKLDGIKFSEFDPE 422 (896)
T ss_pred cccccccccccccCcCcCccccccccCCcccccccCcceeccccccccCCccccccCCcccccccccccccccccccCCC
Confidence 68899999999 56689999999999999889999999888888888889999999999999999999999877654
Q ss_pred -------------------cc--cccCCCCCCCceeEEEEecccch--hhhcccc----ccCCCC-----------C--C
Q 009150 220 -------------------SL--KFCFPVKPCEKSSLVTVNRSLEA--ERLVMNG----CSRDGA-----------K--S 259 (542)
Q Consensus 220 -------------------~~--~~~~~~~~c~ea~lm~l~~~~~~--~~~~~~~----~~~~~~-----------~--~ 259 (542)
.+ ..+|... ..+|--+.+.+. .+.+++. ....+. . .
T Consensus 423 ~~~~~d~~~~~~~~~iks~~~e~e~s~~~~----s~~~~~hv~~~~~s~tq~~~s~~~~~~~~~~~~~~~i~~~~~~~~~ 498 (896)
T KOG2043|consen 423 SPEKLDKLRKASEEVIKSNSGELENSFDSK----SELFGKHVIDEHGSNTQMEDSVSDQKRESEVFNDVKITSYPAPPKQ 498 (896)
T ss_pred cccccchhhhcccccccccchhhhhcccCC----ccccccccccCCCCccccccchhhhhhhccccccccccccCCCccc
Confidence 11 3344442 333321111100 0111110 000000 0 0
Q ss_pred CCCCCCCCCc-CCCcccccc---------------ccccccccc--ccccccccCCCCceeecCCCccchhhcccccccc
Q 009150 260 SGCSRSLEPV-HGSGELAAF---------------ENVHCSNMT--VGAAQIGTDTGAKHCSCSQGTKRRWEASTSSLKS 321 (542)
Q Consensus 260 ~~~~~~~~~~-~~~~~~~~~---------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~kr~~~~s~~~l~s 321 (542)
...+...... -.-.+..++ ....++++. ....|.. ++..--.+..|.++.|.+|+++..|
T Consensus 499 ~~~~~~~~~~~id~k~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~--~d~~t~~~~~~~~~~~~~s~~~~~s 576 (896)
T KOG2043|consen 499 NNERQPVKGDDIDLKGEESSTESVRQLLAKSKREKLTSKSNRKEKETIASQIE--ADVVTPESQWGLSTKNLASSSDETS 576 (896)
T ss_pred cccccccccccccccccCCCCcchhhhhccCcccccccccccccccccchhhh--hcccCcccccCcccccccccccccc
Confidence 0000000000 000011111 111112222 2233333 3333333348889999999999999
Q ss_pred ccccCCCCCcccccccccccc-cCCccccCCCCCCCCC-CCCCCCccccccCCCccCCCcccccccccccccccCCC---
Q 009150 322 KKVKGSSCADCHLDSDRSLAS-AGGETVGLSGCKPLRE-ITPSNHVTVDCTGNDAKEDRPVCTTSAAFISKEFQSNG--- 396 (542)
Q Consensus 322 k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~k~~~~~~~~~~~~~~~is~~~~s~~--- 396 (542)
|+++.++.---+..+..+.+. ..++......-....+ .+... ..++...-+... ..+-..+++..+..+..
T Consensus 577 ~~~~~~~~~~~~~n~~~~~qi~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~sr~~~t~~~~e~~s~~~~~ 652 (896)
T KOG2043|consen 577 KDERKNFKRLTRSNSDNDAQLNVSSKSSKPKTSQSSSQGESCPD---VPTICVRTNYSG-ASRLASTPAASELRSSSANL 652 (896)
T ss_pred hhhhccccccccccccchhhhhccccccCcccccccccCCCCCC---cccccccccccc-cchhccccchhhhhhhhhcc
Confidence 999997766555544433332 1111111111000000 00000 011111100000 00001111111111111
Q ss_pred -----CCeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCC
Q 009150 397 -----KCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGR 471 (542)
Q Consensus 397 -----k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk 471 (542)
..+.++|++..+.. .++..++.|||.+......+||+|+.+++||.|||+||++|+|||+++||.+|++.|.
T Consensus 653 ~e~~~~r~~~lfs~~~~~~---~~k~~~k~lg~s~~ss~~e~Th~i~~rirRT~k~Leai~~G~~ivT~~wL~s~~k~g~ 729 (896)
T KOG2043|consen 653 NELASKRIEVLFSDKNDGK---NYKLAKKFLGGSVASSDSEATHFIADRIRRTLKFLEAISSGKPLVTPQWLVSSLKSGE 729 (896)
T ss_pred chhhccceeeeeeeccCch---hhhhHHhhccceeecccccceeeeehhhhccHHHHhhhccCCcccchHHHHHHhhccc
Confidence 12689999998754 4889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150 472 FVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY 541 (542)
Q Consensus 472 ~LdEe~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L 541 (542)
|+||++|.+.|.+.+++|++++..++.||+.+ ++|.|+.|++++.+.++...+..||+.+||.|+..+
T Consensus 730 ~~dek~yil~D~ekEk~~gf~l~ssl~RAr~~--plL~g~~v~vtp~v~p~~~~v~eiie~~ggnvv~~~ 797 (896)
T KOG2043|consen 730 KLDEKPYILHDEEKEKEFGFRLKSSLLRARAD--PLLEGINVHVTPSVTPSPKTVVEIIEISGGNVVSDS 797 (896)
T ss_pred cccCccccccCHHHHhccCcchhhHHHHhhcc--hhhcCceEEeccccccCcchhHHHHhhcCcceeccc
Confidence 99999999999999999999999999999875 799999999999999999999999999999998653
No 2
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.58 E-value=1.3e-15 Score=142.43 Aligned_cols=121 Identities=17% Similarity=0.184 Sum_probs=112.3
Q ss_pred chhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeee-ccCCCceeEeeee
Q 009150 87 CSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQI-VPADTQYAEVPLA 165 (542)
Q Consensus 87 ~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i-~~~d~~~aeI~~~ 165 (542)
.|+|...|+..|.. ++..++.+|.| ++|. .+..|+.|.+|.+.+ .+|.||||+.++. .+++ .+||..+
T Consensus 3 iR~A~~~Di~~I~~----Li~~~~~~gil---~~rs-~~~le~~i~dF~i~E-~~g~viGC~aL~~~~~~~--~gE~~~l 71 (153)
T COG1246 3 IRKARISDIPAILE----LIRPLELQGIL---LRRS-REQLEEEIDDFTIIE-RDGKVIGCAALHPVLEED--LGELRSL 71 (153)
T ss_pred eeeccccchHHHHH----HHHHHhhcccc---chhh-HHHHHHHHhhheeee-eCCcEEEEEeecccCccC--eeeEEEE
Confidence 47899999999999 99999999999 9999 889999999999987 5899999999985 4455 9999999
Q ss_pred eeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150 166 AVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV 219 (542)
Q Consensus 166 AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~ 219 (542)
||+|+|||+|+|..|++++++.+++.||+++|++|. .+.+||.+.||+..+..
T Consensus 72 aV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt-~~~~~F~~~GF~~vd~~ 124 (153)
T COG1246 72 AVHPDYRGSGRGERLLERLLADARELGIKELFVLTT-RSPEFFAERGFTRVDKD 124 (153)
T ss_pred EECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec-ccHHHHHHcCCeECccc
Confidence 999999999999999999999999999999999995 59999999999999863
No 3
>KOG4362 consensus Transcriptional regulator BRCA1 [Replication, recombination and repair; Transcription]
Probab=99.48 E-value=7.8e-14 Score=154.85 Aligned_cols=143 Identities=23% Similarity=0.375 Sum_probs=112.1
Q ss_pred cccCCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECC-----CCCcHHHHHHHhcCCeEeCHHHHH
Q 009150 391 EFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGK-----VRKTLNFLTALCSGAWIVSPNWLK 464 (542)
Q Consensus 391 ~~~s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k-----~~RTlKfL~AIA~G~wIVSpsWL~ 464 (542)
......++.+.+.||+++++ ++.+.++..+ ++...+ +.+||+|+.. +.||+|||.+|++|+||++..|+.
T Consensus 471 s~~~~~kk~~~~~s~l~p~e-k~~v~~~a~~---t~~k~~~~~~thvi~~~~~~g~c~rTlk~~~gil~gkwi~~~~w~~ 546 (684)
T KOG4362|consen 471 STHRFKKKLVLLVSGLTPSE-KQLVEKFAVD---TISKFWIEPVTHVIASTDLEGACLRTLKVLMGILRGKWILSYDWVL 546 (684)
T ss_pred cccCcccceeeeeccCCcch-HHHHHHHHHH---HHhhccCCCceeeeeecccccchhhhHHHHHHhhcCceeeeHHHHH
Confidence 34445667888999999988 4556666555 555555 8999999964 799999999999999999999999
Q ss_pred HHHHcCCCCCCCCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEe-CCCCCCHHHHHHHHHhCCCEEec
Q 009150 465 ESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMA-AHIQPPIKTLSAIVRSAGGNVSS 539 (542)
Q Consensus 465 dSlk~Gk~LdEe~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is-~~v~p~~~~L~~LIeagGG~V~~ 539 (542)
+|++.++|++|++|||...--...-+. .....+|..+..+||+|..||+- +...++.+.|+.++.++||+++.
T Consensus 547 ~s~k~~~~~~eepfEl~~d~~~~~~~~--~~~~~~a~s~~~kLf~gl~~~~~g~fs~~p~~~l~~l~~~~gg~~l~ 620 (684)
T KOG4362|consen 547 ASLKLRKWVSEEPFELQIDVPGAREGP--KEKRLRAESYKPKLFEGLKFYFVGDFSNPPKEQLQELVHLAGGTILQ 620 (684)
T ss_pred HHHHhcCCCCCCCeeEeecccCcccCc--ccccccccccCcchhcCCcceeecccccCcHHHHHHHHhhcCcceee
Confidence 999999999999999986532111111 11224555667899999999885 55677899999999999999875
No 4
>PRK07757 acetyltransferase; Provisional
Probab=99.40 E-value=6.3e-13 Score=120.63 Aligned_cols=92 Identities=22% Similarity=0.371 Sum_probs=81.4
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV 219 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~ 219 (542)
+++++||.+.+...+++ .++|..++|+|+|||+|+|+.|+.++.+.++..|+.++.+.+. +..||+|+||+.....
T Consensus 48 ~~~~lvG~~~l~~~~~~--~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~--~~~~Y~k~GF~~~~~~ 123 (152)
T PRK07757 48 EEGEIVGCCALHILWED--LAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY--QPEFFEKLGFREVDKE 123 (152)
T ss_pred ECCEEEEEEEEEeccCC--ceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHHCCCEEcccc
Confidence 45799999988776544 7889999999999999999999999999999999999987776 6789999999998875
Q ss_pred ----------cccccCCCCCCCceeEEE
Q 009150 220 ----------SLKFCFPVKPCEKSSLVT 237 (542)
Q Consensus 220 ----------~~~~~~~~~~c~ea~lm~ 237 (542)
..|+.+|. |+|+.|+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~--~~~~~~~~ 149 (152)
T PRK07757 124 ALPQKVWADCIKCPKFPN--CDEIAMIK 149 (152)
T ss_pred cCChhHHhcCccCCCCCC--cchhhhhh
Confidence 88899998 99988765
No 5
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.33 E-value=5.2e-12 Score=102.49 Aligned_cols=75 Identities=20% Similarity=0.289 Sum_probs=69.3
Q ss_pred CCCcEEEEEEeeeccCC---CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcCc
Q 009150 140 DDDVVVAAITYQIVPAD---TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQDT 213 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d---~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqGF 213 (542)
++|+|||++.+.+.+.+ ..+++|..++|+++|||+|||+.|++++++.+++.|+..+.+.+... +..||+|+||
T Consensus 3 ~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k~Gf 82 (83)
T PF00583_consen 3 EDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEKLGF 82 (83)
T ss_dssp ETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHHTTE
T ss_pred CCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHHcCC
Confidence 57899999999999865 47999999999999999999999999999999999999998888774 7799999999
Q ss_pred c
Q 009150 214 S 214 (542)
Q Consensus 214 ~ 214 (542)
+
T Consensus 83 ~ 83 (83)
T PF00583_consen 83 E 83 (83)
T ss_dssp E
T ss_pred C
Confidence 5
No 6
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.21 E-value=2.9e-11 Score=99.17 Aligned_cols=70 Identities=26% Similarity=0.379 Sum_probs=59.7
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA 215 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~ 215 (542)
+++++||++.+.. ..++++|..+||+|++||+|||+.|++++++.+++ ..+++.+.+.+..||+|+||++
T Consensus 10 ~~~~ivG~~~~~~---~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~~~~~~~fY~~~GF~~ 79 (79)
T PF13508_consen 10 DDGEIVGFIRLWP---NEDFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFTNPAAIKFYEKLGFEE 79 (79)
T ss_dssp ETTEEEEEEEEEE---TTTEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEEEHHHHHHHHHTTEEE
T ss_pred ECCEEEEEEEEEE---cCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEEcHHHHHHHHHCcCCC
Confidence 5789999998733 23489999999999999999999999999888844 6678888889999999999974
No 7
>PF00533 BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IPR001357 The BRCT domain (after the C_terminal domain of a breast cancer susceptibility protein) is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage [], for example as found in the breast cancer DNA-repair protein BRCA1. The domain is an approximately 100 amino acid tandem repeat, which appears to act as a phospho-protein binding domain []. A chitin biosynthesis protein from yeast also seems to belong to this group. ; GO: 0005622 intracellular; PDB: 3L46_A 3AL3_A 3AL2_A 1WF6_A 3II6_X 2NTE_B 3FA2_A 2R1Z_A 2COK_A 2K7F_A ....
Probab=99.18 E-value=1.2e-10 Score=94.26 Aligned_cols=71 Identities=25% Similarity=0.514 Sum_probs=64.1
Q ss_pred CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCC-CCcHHHHHHHhcCCeEeCHHHHHHHH
Q 009150 396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKV-RKTLNFLTALCSGAWIVSPNWLKESF 467 (542)
Q Consensus 396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~-~RTlKfL~AIA~G~wIVSpsWL~dSl 467 (542)
-+++.|+++++...+ ++.+.++|+++||++.... +.+||||++.. .++.|++.|.+.|++||+++||.+|+
T Consensus 6 F~g~~f~i~~~~~~~-~~~l~~~i~~~GG~v~~~~~~~~thvI~~~~~~~~~k~~~~~~~~i~iV~~~Wi~~ci 78 (78)
T PF00533_consen 6 FEGCTFCISGFDSDE-REELEQLIKKHGGTVSNSFSKKTTHVIVGNPNKRTKKYKAAIANGIPIVSPDWIEDCI 78 (78)
T ss_dssp TTTEEEEESSTSSSH-HHHHHHHHHHTTEEEESSSSTTSSEEEESSSHCCCHHHHHHHHTTSEEEETHHHHHHH
T ss_pred CCCEEEEEccCCCCC-HHHHHHHHHHcCCEEEeecccCcEEEEeCCCCCccHHHHHHHHCCCeEecHHHHHHhC
Confidence 456888897777665 7889999999999998887 89999999987 89999999999999999999999996
No 8
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.15 E-value=6.3e-11 Score=111.80 Aligned_cols=85 Identities=19% Similarity=0.228 Sum_probs=72.6
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV 219 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~ 219 (542)
+++++||.+.+...+.+ +++|..++|+|+|||+|||+.|++++++.+++.|+.++++.+. +..||+|+||...+..
T Consensus 53 ~~~~iiG~~~~~~~~~~--~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~--~~~fY~k~GF~~~~~~ 128 (169)
T PRK07922 53 LDGEVVGCGALHVMWED--LAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTF--EVEFFARHGFVEIDGT 128 (169)
T ss_pred cCCcEEEEEEEeecCCC--ceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec--cHHHHHHCCCEECccc
Confidence 56789998887766644 7899999999999999999999999999999999999988776 6899999999988643
Q ss_pred --------cccccCCCC
Q 009150 220 --------SLKFCFPVK 228 (542)
Q Consensus 220 --------~~~~~~~~~ 228 (542)
..+.+|+.|
T Consensus 129 ~~~~~~~~~~~~~~~~~ 145 (169)
T PRK07922 129 PVTPEVYAELLRSYDEG 145 (169)
T ss_pred cCChHHHHHHHHhhHHH
Confidence 345666665
No 9
>PTZ00330 acetyltransferase; Provisional
Probab=99.10 E-value=2.8e-10 Score=101.96 Aligned_cols=79 Identities=18% Similarity=0.237 Sum_probs=69.7
Q ss_pred CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150 140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA 215 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~ 215 (542)
+++++||.+.+...+ .+..+++|..+.|+|+|||+|||+.|++++.+.+++.|+..+.+.++..|..||+|+||..
T Consensus 59 ~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~n~~a~~~y~k~GF~~ 138 (147)
T PTZ00330 59 PTQRIVGTASLFVEPKFTRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDCTEDMVAFYKKLGFRA 138 (147)
T ss_pred CCCEEEEEEEEEeccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecChHHHHHHHHCCCEE
Confidence 567999999877654 2324688999999999999999999999999999999999999998888999999999998
Q ss_pred ccc
Q 009150 216 DTA 218 (542)
Q Consensus 216 ~~~ 218 (542)
...
T Consensus 139 ~~~ 141 (147)
T PTZ00330 139 CER 141 (147)
T ss_pred ece
Confidence 764
No 10
>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.
Probab=99.09 E-value=4.9e-10 Score=86.85 Aligned_cols=70 Identities=30% Similarity=0.508 Sum_probs=61.0
Q ss_pred eEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHH
Q 009150 399 FRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFR 468 (542)
Q Consensus 399 ~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk 468 (542)
..|+++|..+...+..+++.++.+||.+.... ..+||||++......++..|...|++||+++||.+|++
T Consensus 2 ~~~~i~g~~~~~~~~~l~~~i~~~Gg~v~~~~~~~~thvI~~~~~~~~~~~~~~~~~~~iV~~~Wi~~~~~ 72 (72)
T cd00027 2 LTFVITGDLPSEERDELKELIEKLGGKVTSSVSKKTTHVIVGSDAGPKKLLKAIKLGIPIVTPEWLLDCLK 72 (72)
T ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCEEeccccCCceEEEECCCCCchHHHHHHHcCCeEecHHHHHHHhC
Confidence 57889998744447889999999999999988 59999999987666668999999999999999999974
No 11
>PLN02825 amino-acid N-acetyltransferase
Probab=99.08 E-value=2.4e-10 Score=125.72 Aligned_cols=139 Identities=13% Similarity=0.130 Sum_probs=100.4
Q ss_pred cCCCceEEeeCCCCccccchhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEE
Q 009150 69 KGEEYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAI 148 (542)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i 148 (542)
|..+-.=.+|-.... ...|++..+|+..|.. .+....+.|.. ..|. .+.....+-.|.+.+ .||+|||++
T Consensus 353 ft~dg~gt~i~~~~~-e~IR~At~eDi~~I~~----Li~~lee~g~l---v~rs-~e~le~ei~~f~V~e-~Dg~IVG~a 422 (515)
T PLN02825 353 FTRDGMGTMIASDMY-EGTRMARVEDLAGIRQ----IIRPLEESGIL---VRRT-DEELLRALDSFVVVE-REGSIIACA 422 (515)
T ss_pred hccCCceeEeccChH-hhheeCCHHHHHHHHH----HHHHHHHcCCC---cCCC-HHHHHhcCCcEEEEE-ECCEEEEEE
Confidence 444444466767777 7789999999998888 55444444432 1111 111111111123322 578999999
Q ss_pred EeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150 149 TYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV 219 (542)
Q Consensus 149 ~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~ 219 (542)
.+..++ +...+||..+||+|+|||+|+|++|++++++++++.|++++++.+. .+..||+|+||...+..
T Consensus 423 al~~~~-~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Lltt-~a~~fY~k~GF~~~~~~ 491 (515)
T PLN02825 423 ALFPFF-EEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLTT-RTADWFVRRGFSECSIE 491 (515)
T ss_pred EEEeec-CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeC-cHHHHHHHCCCEEeChh
Confidence 887665 4467899999999999999999999999999999999999999874 68899999999987743
No 12
>KOG1472 consensus Histone acetyltransferase SAGA/ADA, catalytic subunit PCAF/GCN5 and related proteins [Chromatin structure and dynamics; Transcription]
Probab=99.08 E-value=1.9e-11 Score=137.11 Aligned_cols=122 Identities=21% Similarity=0.314 Sum_probs=109.3
Q ss_pred chhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeee
Q 009150 87 CSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAA 166 (542)
Q Consensus 87 ~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~A 166 (542)
.-+..|-+..++|..|||.|+ .+||.|+|+|+.|.+.-....+. -+||+|+++.+| .+.|.+|.++|
T Consensus 386 ~~~~~li~~~~~f~~qL~emp--------kEyi~rlv~d~~h~~~~~~~d~~----g~vggi~~r~f~-~k~f~eivf~a 452 (720)
T KOG1472|consen 386 EIPIELIGLRNEFSKQLPEMP--------KEYISRLVFDTSHHVMARIKDNE----GVVGGICFRPFP-EKGFTEIVFCA 452 (720)
T ss_pred cchhhhccchhHHHhhcccch--------HHHHHhhccccccccceeecccc----ccccccccCcCc-ccCCcceeecc
Confidence 345667778888999999999 99999999999999998886432 299999999999 55799999999
Q ss_pred eccCccccChHHHHHHHHHHHHHHcC-CcEEEEEccccchhhhhhcCccccccccc
Q 009150 167 VSSIYQHKGVGRLLYLELRKRLQSVG-IRTIFCWGDKESEGFWHKQDTSADTAVSL 221 (542)
Q Consensus 167 V~~~~QgkGiG~~Lv~~l~~~lk~~G-I~~I~l~a~~~A~~Fw~KqGF~~~~~~~~ 221 (542)
|+.+.|.+|+|+-+|++++++.+... |.+..++|+.+|.+||+||||+..-....
T Consensus 453 v~~~eqv~g~g~hlmnhlkd~~~~~~~i~~~ltyad~~aigyfkkqgfs~ei~~~~ 508 (720)
T KOG1472|consen 453 VTTDEQVKGSGTHLMNHLKDYVRSSSTIDYALTYADEGAIGYFKKQGFSKEIKFEK 508 (720)
T ss_pred ccCcccccccCcCchhhHHHHhhccchHHHHHHhhhhcccccccCccchhhccccc
Confidence 99999999999999999999999988 99999999999999999999998765533
No 13
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.08 E-value=2.4e-10 Score=102.03 Aligned_cols=78 Identities=14% Similarity=0.083 Sum_probs=66.7
Q ss_pred CCCcEEEEEEeeeccC---CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCc
Q 009150 140 DDDVVVAAITYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDT 213 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~---d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF 213 (542)
+++++||.+.+...+. ...+++|..++|+|++||+|||+.|++++++.++..|+..+.+.+.. .|..||+|+||
T Consensus 54 ~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~~~Gf 133 (144)
T PRK10146 54 LDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGY 133 (144)
T ss_pred ECCEEEEEEEEEecccccccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHcCC
Confidence 4678999998876542 11357899999999999999999999999999999999999887654 59999999999
Q ss_pred cccc
Q 009150 214 SADT 217 (542)
Q Consensus 214 ~~~~ 217 (542)
....
T Consensus 134 ~~~~ 137 (144)
T PRK10146 134 EQSH 137 (144)
T ss_pred chhh
Confidence 8764
No 14
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.05 E-value=4.5e-10 Score=120.70 Aligned_cols=78 Identities=18% Similarity=0.323 Sum_probs=69.2
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV 219 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~ 219 (542)
+++++||++.+...+ +..+++|..++|+|+|||+|+|++||+++++++++.|+.++++++. ++..||+|+||+..+..
T Consensus 329 ~dg~iVG~~~~~~~~-~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~~-~a~~fY~k~GF~~~g~~ 406 (429)
T TIGR01890 329 HDGNIIGCAALYPYA-EEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTT-RTGHWFRERGFQTASVD 406 (429)
T ss_pred ECCEEEEEEEEEecC-CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeec-chHHHHHHCCCEECChh
Confidence 467999999877665 4468999999999999999999999999999999999999988765 57899999999999764
No 15
>PRK10314 putative acyltransferase; Provisional
Probab=99.02 E-value=5.6e-10 Score=104.02 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=68.3
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccccchhhhhhcCcccccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDKESEGFWHKQDTSADTA 218 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~~A~~Fw~KqGF~~~~~ 218 (542)
+++++||.+.+.....+...++|.-+||+++|||+|||+.||+++++.++.. +...+.|.+...+.+||+|.||..+++
T Consensus 55 ~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k~GF~~~g~ 134 (153)
T PRK10314 55 KNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSFGFIPVTE 134 (153)
T ss_pred ECCEEEEEEEEecCCCCCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHHHHHHCCCEECCC
Confidence 3678999986654433334689999999999999999999999999999885 788899999878899999999999887
Q ss_pred c
Q 009150 219 V 219 (542)
Q Consensus 219 ~ 219 (542)
.
T Consensus 135 ~ 135 (153)
T PRK10314 135 V 135 (153)
T ss_pred c
Confidence 4
No 16
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.02 E-value=1.1e-09 Score=99.24 Aligned_cols=78 Identities=15% Similarity=0.184 Sum_probs=67.1
Q ss_pred CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150 140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA 215 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~ 215 (542)
++++|||.+.+.+.+ ...++++|..++|+|+|||+|||+.|++++++++++.|+.+|.+.+......||+|+||..
T Consensus 62 ~~~~ivG~~~~~~~~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~~y~k~GF~~ 141 (150)
T PLN02706 62 ASGRIIATGSVFVERKFIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKAFYEKCGYVR 141 (150)
T ss_pred CCCcEEEEEEEEEEeecccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHHHHHHCcCEE
Confidence 367899988775432 1225778889999999999999999999999999999999999998887789999999997
Q ss_pred cc
Q 009150 216 DT 217 (542)
Q Consensus 216 ~~ 217 (542)
.+
T Consensus 142 ~g 143 (150)
T PLN02706 142 KE 143 (150)
T ss_pred eh
Confidence 65
No 17
>PRK13688 hypothetical protein; Provisional
Probab=99.02 E-value=1e-09 Score=103.37 Aligned_cols=122 Identities=19% Similarity=0.193 Sum_probs=82.3
Q ss_pred CCceEEeeCCCCccccch---hhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEE
Q 009150 71 EEYIFVLVNPKDAEDSCS---KSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAA 147 (542)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~---~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~ 147 (542)
|+-..+|+|.+.+ ..+. .+..+|+.+|+. |..-+|.....+.. + ... +++++||+
T Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~~~~~dl~~l~~------------------l~~~~f~~~~~~~~-~-~~~-~~~~~VG~ 59 (156)
T PRK13688 2 PEVKRLLINYKTL-EEFKKFREFGNQELSMLEE------------------LQANIIENDSESPF-Y-GIY-YGDSLVAR 59 (156)
T ss_pred CceeEEEecchhH-HHHHHHHHhcHHHHHHHHh------------------hhhhEeecCCCCCE-E-EEE-ECCEEEEE
Confidence 4556789999999 5554 455566666655 43333432222211 1 111 36789998
Q ss_pred EEeeec--------cCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150 148 ITYQIV--------PADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV 219 (542)
Q Consensus 148 i~~~i~--------~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~ 219 (542)
+.+... ..+..+++|..++|+|+|||||||++|++++. +.++. +.+.+.+.|..||+|+||+..+..
T Consensus 60 ~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~----~~~~~-~~~~~~~~a~~FY~k~GF~~~~~~ 134 (156)
T PRK13688 60 MSLYKKGGVEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAK----SFQLP-IKTIARNKSKDFWLKLGFTPVEYK 134 (156)
T ss_pred EEEEecCCcccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHH----HhCCe-EEEEeccchHHHHHhCCCEEeEEe
Confidence 765322 23457889999999999999999999998654 34554 555666779999999999988765
No 18
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=98.98 E-value=8.8e-10 Score=94.79 Aligned_cols=67 Identities=24% Similarity=0.390 Sum_probs=57.5
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDT 213 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF 213 (542)
++++|||.+.+. + + ++|.+++|+|+|||+|||++|++.+++.++. |+..+.+.++..|..||+|+||
T Consensus 51 ~~~~ivG~~~~~--~-~---~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 51 EGGEIVGFAWLE--P-D---GEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVEANERARRFYRKLGF 117 (117)
T ss_dssp ETTEEEEEEEEE--T-C---EEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEEC-HHHHHHHHHTT-
T ss_pred ECCEEEEEEEEc--C-C---CeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEEeCHHHHHHHHhCCC
Confidence 467999998875 3 3 3399999999999999999999999999988 9999999988889999999999
No 19
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=98.96 E-value=4.1e-09 Score=98.02 Aligned_cols=89 Identities=17% Similarity=0.131 Sum_probs=73.4
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD 216 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~ 216 (542)
+++++||.+.+...+......+|..++|+|++||+|||+.|+.+++++++..++.+|.+.+.. .|..||+|+||+..
T Consensus 47 ~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k~G~~~~ 126 (157)
T TIGR02406 47 EGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRALFKALARRRG 126 (157)
T ss_pred CCCeEEEEEEEEecCCCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHHhCcccC
Confidence 467899988776666555678899999999999999999999999999999999999877644 48999999999887
Q ss_pred ccccccc-----cCCCC
Q 009150 217 TAVSLKF-----CFPVK 228 (542)
Q Consensus 217 ~~~~~~~-----~~~~~ 228 (542)
...+..+ -||+|
T Consensus 127 ~~~~~~~~~~~~~~~~~ 143 (157)
T TIGR02406 127 VHLIEEPFFDGELFPGG 143 (157)
T ss_pred CCeEeecccccccCccC
Confidence 7664333 35665
No 20
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=98.95 E-value=8.4e-10 Score=87.89 Aligned_cols=62 Identities=27% Similarity=0.454 Sum_probs=52.5
Q ss_pred eEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHH
Q 009150 399 FRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNW 462 (542)
Q Consensus 399 ~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsW 462 (542)
++|++||+.+.+ +..+.+.++.|||.+..+. ..+||||+... .+.||-.|...|++||+|+|
T Consensus 1 ~~i~~sg~~~~~-~~~l~~~i~~~Gg~~~~~lt~~~THLI~~~~-~~~K~~~A~~~gi~vV~~~W 63 (63)
T PF12738_consen 1 VVICFSGFSGKE-RSQLRKLIEALGGKYSKDLTKKTTHLICSSP-EGKKYRKAKEWGIPVVSPDW 63 (63)
T ss_dssp -EEEEEEB-TTT-CCHHHHHHHCTT-EEESSSSTT-SEEEEES---HHHHHHHHHCTSEEEEHHH
T ss_pred CEEEECCCCHHH-HHHHHHHHHHCCCEEeccccCCceEEEEeCC-CcHHHHHHHHCCCcEECCCC
Confidence 478999999877 6889999999999999998 89999999664 59999999999999999999
No 21
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=98.92 E-value=2.2e-09 Score=120.47 Aligned_cols=76 Identities=21% Similarity=0.274 Sum_probs=66.8
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV 219 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~ 219 (542)
++|+|||++.+..... .+++|..++|+|+|||||||+.|++++++.++..|+..+.+.+. +..||+|+||+..+..
T Consensus 510 ~~g~IVG~~~l~~~~~--~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~~--a~~FYek~GF~~~~~~ 585 (614)
T PRK12308 510 HHGEVTGCASLYIYDS--GLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLTR--VPEFFMKQGFSPTSKS 585 (614)
T ss_pred ECCEEEEEEEEEEcCC--CeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEeeC--cHHHHHHCCCEECCcc
Confidence 4678999998766543 37889999999999999999999999999999999999988764 6899999999988855
No 22
>smart00292 BRCT breast cancer carboxy-terminal domain.
Probab=98.91 E-value=6.2e-09 Score=82.45 Aligned_cols=73 Identities=34% Similarity=0.546 Sum_probs=60.6
Q ss_pred CCeEEEEcc-cCChhhHHHHHHHHHHcCcEEeccCC--ceeEEEECCCCCc-HHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150 397 KCFRIMLMN-IADDSKKVHLTKVIEDLGGAVTSDGS--TSTHVVTGKVRKT-LNFLTALCSGAWIVSPNWLKESFREG 470 (542)
Q Consensus 397 k~~rVlfSG-~~de~kk~~L~kiIkkLGG~V~~d~~--~~THLIt~k~~RT-lKfL~AIA~G~wIVSpsWL~dSlk~G 470 (542)
++.+++++| +.... +..+.+.+..+||++..... .+||+|+...... .++..|...+++||+++||.+|++.+
T Consensus 4 ~g~~~~~~g~~~~~~-~~~l~~~i~~~Gg~~~~~~~~~~~thvi~~~~~~~~~~~~~~~~~~~~iV~~~Wi~~~~~~~ 80 (80)
T smart00292 4 KGKVFVITGKFDKNE-RDELKELIEALGGKVTSSLSSKTTTHVIVGSPEGGKLELLLAIALGIPIVTEDWLLDCLKAG 80 (80)
T ss_pred CCeEEEEeCCCCCcc-HHHHHHHHHHcCCEEecccCccceeEEEEcCCCCccHHHHHHHHcCCCCccHHHHHHHHHCc
Confidence 457899999 54444 78899999999999999884 8999999874333 33788999999999999999999864
No 23
>PHA00673 acetyltransferase domain containing protein
Probab=98.90 E-value=6e-09 Score=98.43 Aligned_cols=79 Identities=10% Similarity=0.108 Sum_probs=72.0
Q ss_pred CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc--cchhhhhhcCc
Q 009150 140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK--ESEGFWHKQDT 213 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~--~A~~Fw~KqGF 213 (542)
++|+|||.+.+.+.| .+..++.|..+.|++++||+|||+.|++++++++++.|...+++.+-+ +.+.||.+||+
T Consensus 62 ~~g~vVG~~~l~~~p~l~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~tv~fy~~~g~ 141 (154)
T PHA00673 62 RGEELVGFACLLVTPVPHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLVQLLPAAGY 141 (154)
T ss_pred ECCEEEEEEEEEEecCCccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccchHHHHhCCc
Confidence 367899999998888 345889999999999999999999999999999999999999999887 59999999999
Q ss_pred ccccc
Q 009150 214 SADTA 218 (542)
Q Consensus 214 ~~~~~ 218 (542)
.....
T Consensus 142 ~~~~~ 146 (154)
T PHA00673 142 RETNR 146 (154)
T ss_pred hhhch
Confidence 88654
No 24
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=98.90 E-value=5e-09 Score=100.04 Aligned_cols=78 Identities=13% Similarity=0.101 Sum_probs=67.3
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD 216 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~ 216 (542)
+++.+||.+.+..... ..++|..++|+|++||+|||+.|+.+++++++++|+..|.+.+.. .|..||+|+||+..
T Consensus 106 ~~g~iiG~i~l~~~~~--~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~klGF~~~ 183 (191)
T TIGR02382 106 ASGDPRGYVTLRELND--TDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIRSGANIE 183 (191)
T ss_pred cCCeEEEEEEEEecCC--CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCccc
Confidence 4678999998876543 357899999999999999999999999999999999999887543 49999999999987
Q ss_pred ccc
Q 009150 217 TAV 219 (542)
Q Consensus 217 ~~~ 219 (542)
+..
T Consensus 184 ~~~ 186 (191)
T TIGR02382 184 STA 186 (191)
T ss_pred cce
Confidence 653
No 25
>PRK03624 putative acetyltransferase; Provisional
Probab=98.89 E-value=5.3e-09 Score=91.44 Aligned_cols=77 Identities=19% Similarity=0.191 Sum_probs=64.3
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD 216 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~ 216 (542)
+++++||.+.+.... +.+.|..++|+|+|||+|||+.|+..+.+.++..|++.+.+.+.. .+..||+|+||+..
T Consensus 52 ~~~~~vG~~~~~~~~---~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k~GF~~~ 128 (140)
T PRK03624 52 VGGEVVGTVMGGYDG---HRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYEALGYEEQ 128 (140)
T ss_pred cCCcEEEEEEeeccC---CCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCccc
Confidence 357899988665322 346688999999999999999999999999999999999777654 48999999999987
Q ss_pred ccc
Q 009150 217 TAV 219 (542)
Q Consensus 217 ~~~ 219 (542)
+..
T Consensus 129 ~~~ 131 (140)
T PRK03624 129 DRI 131 (140)
T ss_pred cEE
Confidence 643
No 26
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=98.89 E-value=2.9e-09 Score=110.01 Aligned_cols=73 Identities=18% Similarity=0.217 Sum_probs=65.3
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV 219 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~ 219 (542)
++++|||++.+. . .+|..+||+|+|||+|||+.||+++++++++.|+.+++|.+...+.+||+|+||+..+..
T Consensus 13 ~~~~iVG~~~l~--~-----~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~~~fYek~GF~~~~~~ 85 (297)
T cd02169 13 DAGELIATGSIA--G-----NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKNAKFFRGLGFKELANA 85 (297)
T ss_pred ECCEEEEEEEec--c-----CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccHHHHHHHCCCEEeccc
Confidence 568999987653 2 359999999999999999999999999999999999999999889999999999987733
No 27
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=98.88 E-value=7.1e-09 Score=90.99 Aligned_cols=74 Identities=24% Similarity=0.329 Sum_probs=62.9
Q ss_pred CCCcEEEEEEeeecc---CCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcc
Q 009150 140 DDDVVVAAITYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTS 214 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~---~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~ 214 (542)
++|+|||.+.+.... .++ ..+.|.-+||+|+|||+|+|++|+.++.+++++.|+..+++++. ...||+|.||+
T Consensus 48 ~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~~--~~~~Y~~~G~~ 125 (127)
T PF13527_consen 48 DDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFPS--SPPFYRRFGFE 125 (127)
T ss_dssp ETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE-S--SHHHHHHTTEE
T ss_pred ECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEecC--ChhhhhcCCCE
Confidence 478999988876653 444 57999999999999999999999999999999999999999994 69999999997
Q ss_pred c
Q 009150 215 A 215 (542)
Q Consensus 215 ~ 215 (542)
.
T Consensus 126 ~ 126 (127)
T PF13527_consen 126 Y 126 (127)
T ss_dssp E
T ss_pred E
Confidence 5
No 28
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=98.88 E-value=1.3e-08 Score=88.29 Aligned_cols=78 Identities=26% Similarity=0.246 Sum_probs=66.4
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD 216 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~ 216 (542)
+++++||.+.+.... +..+|..++|+|+|||+|+|+.|++++++.+.+.|+.++.+.+.. .+..||+|+||+..
T Consensus 38 ~~~~~vg~~~~~~~~---~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~~Gf~~~ 114 (131)
T TIGR01575 38 IGGKVVGYAGVQIVL---DEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQALYKKLGFNEI 114 (131)
T ss_pred cCCeEEEEEEEEecC---CCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHHHHHHcCCCcc
Confidence 467899999865543 346799999999999999999999999999999999999876443 48899999999998
Q ss_pred cccc
Q 009150 217 TAVS 220 (542)
Q Consensus 217 ~~~~ 220 (542)
+...
T Consensus 115 ~~~~ 118 (131)
T TIGR01575 115 AIRR 118 (131)
T ss_pred cccc
Confidence 8764
No 29
>PRK05279 N-acetylglutamate synthase; Validated
Probab=98.87 E-value=6.5e-09 Score=112.04 Aligned_cols=78 Identities=15% Similarity=0.332 Sum_probs=67.5
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV 219 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~ 219 (542)
+++++||++.+...+ ....++|..++|+|+|||+|+|++|+.++++.+++.|+.++++.+. .+..||+|+||+..+..
T Consensus 341 ~dg~iVG~~~~~~~~-~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~~-~a~~fY~k~GF~~~g~~ 418 (441)
T PRK05279 341 RDGLIIGCAALYPFP-EEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLTT-RTAHWFLERGFVPVDVD 418 (441)
T ss_pred ECCEEEEEEEEEEcC-CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEecc-hHHHHHHHCcCEECChh
Confidence 467999988665543 3457899999999999999999999999999999999999987663 58999999999998864
No 30
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=98.84 E-value=8.5e-09 Score=103.93 Aligned_cols=82 Identities=18% Similarity=0.274 Sum_probs=70.1
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD 216 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~ 216 (542)
.+|++||.+.+.+.+ ....++|..++|+|+|||+|||+.|+.++++.+++.|+..+++.+.. .+..||+|+||...
T Consensus 165 ~~g~iVG~~~~~~~~-~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~k~GF~~~ 243 (266)
T TIGR03827 165 DGGKIIALASAEMDP-ENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFARLGYAYG 243 (266)
T ss_pred ECCEEEEEEEEecCC-CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHHHcCCccc
Confidence 367999998875554 33568999999999999999999999999999999999999887764 37889999999999
Q ss_pred cccccc
Q 009150 217 TAVSLK 222 (542)
Q Consensus 217 ~~~~~~ 222 (542)
+.+.+.
T Consensus 244 G~l~n~ 249 (266)
T TIGR03827 244 GTLVNN 249 (266)
T ss_pred cEEeec
Confidence 987443
No 31
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=98.84 E-value=1.8e-08 Score=91.03 Aligned_cols=94 Identities=20% Similarity=0.174 Sum_probs=72.6
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD 216 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~ 216 (542)
+++++||.+.+...+ + .+++..++|+|+|||+|||+.|+..+.+.+++.|+..+.+.+.. .|..||+|+||...
T Consensus 47 ~~~~~vG~~~~~~~~-~--~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~Gf~~~ 123 (146)
T PRK09491 47 VNGQMAAFAITQVVL-D--EATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEV 123 (146)
T ss_pred ECCeEEEEEEEEeec-C--ceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHcCCEEe
Confidence 367999998776544 2 35688899999999999999999999999999999999887644 49999999999987
Q ss_pred ccccccccCCCCCCCceeEEE
Q 009150 217 TAVSLKFCFPVKPCEKSSLVT 237 (542)
Q Consensus 217 ~~~~~~~~~~~~~c~ea~lm~ 237 (542)
+........+++ ..-+.+|.
T Consensus 124 ~~~~~~~~~~~~-~~d~~~~~ 143 (146)
T PRK09491 124 TIRRNYYPTADG-REDAIIMA 143 (146)
T ss_pred eeeeccccCCCC-ceeEEEEe
Confidence 766444444554 32344443
No 32
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=98.81 E-value=1.8e-08 Score=91.29 Aligned_cols=96 Identities=14% Similarity=0.061 Sum_probs=72.1
Q ss_pred CCCcEEEEEEeeecc--CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCc
Q 009150 140 DDDVVVAAITYQIVP--ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDT 213 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~--~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF 213 (542)
.++++||.+.+...+ .....+++. ++|+|+|||+|||+.|++.+.+++++ .|+.++.+.+.. .|..||+|+||
T Consensus 58 ~~~~~vG~~~~~~~~~~~~~~~~~~~-~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~GF 136 (162)
T PRK10140 58 IDGDVVGHLTIDVQQRPRRSHVADFG-ICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGF 136 (162)
T ss_pred ECCEEEEEEEEecccccccceEEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHCCC
Confidence 367999999887653 222345543 89999999999999999999999998 799998766643 58999999999
Q ss_pred cccccccccccCCCCCCCceeEEE
Q 009150 214 SADTAVSLKFCFPVKPCEKSSLVT 237 (542)
Q Consensus 214 ~~~~~~~~~~~~~~~~c~ea~lm~ 237 (542)
+..+...+.....+. .....+|.
T Consensus 137 ~~~g~~~~~~~~~~~-~~d~~~~~ 159 (162)
T PRK10140 137 EIEGTGKKYALRNGE-YVDAYYMA 159 (162)
T ss_pred EEEeecccceeeCCe-EEEEEEEE
Confidence 998887555433332 33344554
No 33
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=98.80 E-value=2e-08 Score=95.86 Aligned_cols=78 Identities=14% Similarity=0.146 Sum_probs=66.5
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSAD 216 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~ 216 (542)
+++++||.+.+..... ..++|..++|+|+|||+|||+.|++++++++++.|+.++.+.+.. .|..||+|+||+..
T Consensus 109 ~~g~~vG~~~l~~~~~--~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~Gf~~~ 186 (194)
T PRK10975 109 ASGQIQGFVTLRELND--TDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRSGANIE 186 (194)
T ss_pred CCCCEEEEEEEEecCC--CceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHHCCCeEe
Confidence 4678999987765432 357899999999999999999999999999999999999877553 48999999999987
Q ss_pred ccc
Q 009150 217 TAV 219 (542)
Q Consensus 217 ~~~ 219 (542)
+..
T Consensus 187 ~~~ 189 (194)
T PRK10975 187 STA 189 (194)
T ss_pred EEE
Confidence 653
No 34
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=98.77 E-value=2.2e-08 Score=92.26 Aligned_cols=78 Identities=22% Similarity=0.266 Sum_probs=65.2
Q ss_pred cEEEEEEeeeccCCC---ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCC-cEEEEEccc---cchhhhhhcCccc
Q 009150 143 VVVAAITYQIVPADT---QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGI-RTIFCWGDK---ESEGFWHKQDTSA 215 (542)
Q Consensus 143 ~VIg~i~~~i~~~d~---~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI-~~I~l~a~~---~A~~Fw~KqGF~~ 215 (542)
+++|.+.....+... ..++|..+||+|+|||+|||++|+.++++.+++.|+ ..+.|.+.. .|.+||+|.||+.
T Consensus 72 ~~~G~~~~~~~~~~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~ 151 (177)
T COG0456 72 KVVGFLLVRVVDGRPSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEV 151 (177)
T ss_pred ceeEEEEEEEecCCccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHHcCCEE
Confidence 589988776444211 267899999999999999999999999999999997 788777765 3999999999999
Q ss_pred ccccc
Q 009150 216 DTAVS 220 (542)
Q Consensus 216 ~~~~~ 220 (542)
.....
T Consensus 152 ~~~~~ 156 (177)
T COG0456 152 VKIRK 156 (177)
T ss_pred Eeeeh
Confidence 87653
No 35
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=98.72 E-value=5.9e-08 Score=87.83 Aligned_cols=82 Identities=22% Similarity=0.306 Sum_probs=69.2
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEccc---cchhhhhhcCccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRL-QSVGIRTIFCWGDK---ESEGFWHKQDTSA 215 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~l-k~~GI~~I~l~a~~---~A~~Fw~KqGF~~ 215 (542)
.+|++||.+.+....+....+++. +.|.+++|++|+|+.|++++++.+ ++.|+++|.+.... .+..||+|.||+.
T Consensus 58 ~~g~iiG~~~~~~~~~~~~~~~~~-~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~~GF~~ 136 (155)
T PF13420_consen 58 EDGKIIGYVSLRDIDPYNHTAELS-IYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKKLGFEE 136 (155)
T ss_dssp CTTEEEEEEEEEESSSGTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHHTTEEE
T ss_pred cCCcEEEEEEEEeeeccCCEEEEe-eEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHhCCCEE
Confidence 488999999888666666788777 667799999999999999999999 99999999754444 4999999999999
Q ss_pred ccccccc
Q 009150 216 DTAVSLK 222 (542)
Q Consensus 216 ~~~~~~~ 222 (542)
.+.....
T Consensus 137 ~g~~~~~ 143 (155)
T PF13420_consen 137 EGELKDH 143 (155)
T ss_dssp EEEEEEE
T ss_pred EEEEecE
Confidence 9987444
No 36
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.66 E-value=4.4e-08 Score=102.76 Aligned_cols=73 Identities=12% Similarity=0.174 Sum_probs=65.1
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV 219 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~ 219 (542)
++|+|||+..+. + ..|..+||+++|||+|+|+.||.++++.+++.|+.++++++.+....||+|+||......
T Consensus 38 ~~~~lVg~g~l~----g---~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~~~fy~klGF~~i~~~ 110 (332)
T TIGR00124 38 EDEEIIGCGGIA----G---NVIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEYAALFEYCGFKTLAEA 110 (332)
T ss_pred ECCEEEEEEEEe----c---CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchHHHHHHHcCCEEeeee
Confidence 467999997652 1 248999999999999999999999999999999999999999888999999999998754
No 37
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=98.66 E-value=7.7e-08 Score=96.72 Aligned_cols=78 Identities=15% Similarity=0.204 Sum_probs=65.3
Q ss_pred CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCccccc
Q 009150 141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSADT 217 (542)
Q Consensus 141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~~ 217 (542)
++++||.+.+...+.+...++|+.++|+|+|||+|||+.|+.++.+.+++.|+..+.+.+.. .|..||+|+||+...
T Consensus 208 ~~~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 287 (292)
T TIGR03448 208 PGELLGFHWTKVHPDEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYEKLGFTVAE 287 (292)
T ss_pred CCcEEEEEEEEecCCCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHHHHcCCEEcc
Confidence 57899986555544333467888899999999999999999999999999999999887754 489999999998765
Q ss_pred c
Q 009150 218 A 218 (542)
Q Consensus 218 ~ 218 (542)
.
T Consensus 288 ~ 288 (292)
T TIGR03448 288 V 288 (292)
T ss_pred c
Confidence 3
No 38
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=98.59 E-value=2.1e-07 Score=89.42 Aligned_cols=114 Identities=21% Similarity=0.250 Sum_probs=83.5
Q ss_pred eeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCC---CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcE
Q 009150 119 LEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPAD---TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRT 195 (542)
Q Consensus 119 i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d---~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~ 195 (542)
..++-.++.|.--+. .++. ++|+|||-|.+-.+.-+ ..---+.-+||+|++||||||++||.+.++.|+..|...
T Consensus 34 v~~lR~~~~~~~~Ls-lVA~-d~g~vvG~Il~s~v~~~g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~ 111 (171)
T COG3153 34 VDKLREGGRPDLTLS-LVAE-DDGEVVGHILFSPVTVGGEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASA 111 (171)
T ss_pred HHHHHhcCCccccee-EEEe-eCCEEEEEEEEeEEEecCcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCE
Confidence 334433444433323 3444 44999999988777633 234458999999999999999999999999999999999
Q ss_pred EEEEccccchhhhhhcCccccccccccccCCCCCCCceeEEE--Eec
Q 009150 196 IFCWGDKESEGFWHKQDTSADTAVSLKFCFPVKPCEKSSLVT--VNR 240 (542)
Q Consensus 196 I~l~a~~~A~~Fw~KqGF~~~~~~~~~~~~~~~~c~ea~lm~--l~~ 240 (542)
|+++++ ..||.|-||+......--..||. .+...|. |..
T Consensus 112 v~vlGd---p~YY~rfGF~~~~~~~l~~p~~~---~~~~fl~~~L~~ 152 (171)
T COG3153 112 VVVLGD---PTYYSRFGFEPAAGAKLYAPGPV---PDERFLALELGD 152 (171)
T ss_pred EEEecC---cccccccCcEEccccccccCCCC---CCceEEEEEccC
Confidence 999999 99999999999887644434442 2255555 644
No 39
>PRK09831 putative acyltransferase; Provisional
Probab=98.59 E-value=8.9e-08 Score=87.21 Aligned_cols=83 Identities=13% Similarity=0.028 Sum_probs=63.9
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV 219 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~ 219 (542)
++|++||.+.+.. .+|..++|+|++||+|||++|+.++++.++. +.+.+...|.+||+|+||+..+..
T Consensus 60 ~~~~iiG~~~~~~-------~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l~v~~~~~a~~~Y~k~Gf~~~g~~ 127 (147)
T PRK09831 60 INAQPVGFITCIE-------HYIDMLFVDPEYTRRGVASALLKPLIKSESE-----LTVDASITAKPFFERYGFQTVKQQ 127 (147)
T ss_pred ECCEEEEEEEehh-------ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-----eEeecchhhHHHHHHCCCEEeecc
Confidence 4679999877642 3578899999999999999999999999876 334556679999999999999886
Q ss_pred cccccCCCCCCCceeEEE
Q 009150 220 SLKFCFPVKPCEKSSLVT 237 (542)
Q Consensus 220 ~~~~~~~~~~c~ea~lm~ 237 (542)
. . .++++ +....+|.
T Consensus 128 ~-~-~~~g~-~~~~~~m~ 142 (147)
T PRK09831 128 R-V-ECRGE-WFINFYMR 142 (147)
T ss_pred c-e-EECCE-EEEeeEEE
Confidence 4 2 24443 44455554
No 40
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=98.51 E-value=3.4e-07 Score=86.16 Aligned_cols=100 Identities=13% Similarity=0.093 Sum_probs=75.6
Q ss_pred CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHH-HcCCcEEEEEccc---cchhhhhhcCcccc
Q 009150 141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQ-SVGIRTIFCWGDK---ESEGFWHKQDTSAD 216 (542)
Q Consensus 141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk-~~GI~~I~l~a~~---~A~~Fw~KqGF~~~ 216 (542)
+|++||.+.+........-++| .++|+++|||+|+|+.++..+.+++. +.|+.+|.+.+.. .|..||+|.||+..
T Consensus 65 ~g~~iG~~~~~~~~~~~~~~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek~GF~~~ 143 (186)
T PRK15130 65 DGEKAGLVELVEINHVHRRAEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFEVE 143 (186)
T ss_pred CCEEEEEEEEEeecCCCCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHHCCCEEE
Confidence 6799999977654433345666 48999999999999999999999987 4799999776543 59999999999999
Q ss_pred ccccccccCCCCCCCceeEEE-Eeccc
Q 009150 217 TAVSLKFCFPVKPCEKSSLVT-VNRSL 242 (542)
Q Consensus 217 ~~~~~~~~~~~~~c~ea~lm~-l~~~~ 242 (542)
+...+.. +.+|.+....+|. +..+.
T Consensus 144 ~~~~~~~-~~~g~~~d~~~~~~~~~~~ 169 (186)
T PRK15130 144 GELIHEF-FINGEYRNTIRMCIFQHQY 169 (186)
T ss_pred EEEeheE-EECCEEEEEEEEEeeHHHH
Confidence 8765442 3344355566777 65554
No 41
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=98.47 E-value=3.7e-07 Score=101.54 Aligned_cols=80 Identities=16% Similarity=0.094 Sum_probs=66.1
Q ss_pred CCCcEEEEEEeeecc---CC-CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcC
Q 009150 140 DDDVVVAAITYQIVP---AD-TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQD 212 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~---~d-~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqG 212 (542)
++|+|||.+.+.... .+ ...++|..++|+|+|||+|||+.||.++.++++..|+.++.+.+.. .|..||+|+|
T Consensus 132 ~~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~klG 211 (547)
T TIGR03103 132 ASGAIIGTVMGVDHRKAFNDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYEKLG 211 (547)
T ss_pred CCCeEEEEEEEEeccccccCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCC
Confidence 468999998764332 12 2357899999999999999999999999999999999999876653 4899999999
Q ss_pred ccccccc
Q 009150 213 TSADTAV 219 (542)
Q Consensus 213 F~~~~~~ 219 (542)
|+.+...
T Consensus 212 f~~~~~y 218 (547)
T TIGR03103 212 FRRIPVF 218 (547)
T ss_pred CEEeeEE
Confidence 9877643
No 42
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=98.44 E-value=1.6e-06 Score=82.34 Aligned_cols=122 Identities=16% Similarity=0.276 Sum_probs=86.9
Q ss_pred hhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCC-CceeEeeeee
Q 009150 88 SKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPAD-TQYAEVPLAA 166 (542)
Q Consensus 88 ~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d-~~~aeI~~~A 166 (542)
....|++-..+-.+.|+.=- +.|--|- |-...-.++.+-. ++++.-||++..-..... +.-+||..+|
T Consensus 23 ~~~~l~~im~Li~k~lsepy--------S~~tyrY-f~~~wp~~~~~a~--d~~~~~VGai~ck~~~~r~~~rgyi~mLa 91 (165)
T KOG3139|consen 23 AEEYLADIMRLIDKDLSEPY--------SIYTYRY-FVPNWPCFCFLAL--DEKGDTVGAIVCKLDTHRNTLRGYIAMLA 91 (165)
T ss_pred HHHHHHHHHHHHhhhcCchh--------HHHHHHh-cccCCceEEEEEE--cCCCceEEEEEEeccccCCcceEEEEEEE
Confidence 44556666666666776533 4444444 3333333443332 122225887755544422 2469999999
Q ss_pred eccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCcccccccc
Q 009150 167 VSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSADTAVS 220 (542)
Q Consensus 167 V~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~~~~~ 220 (542)
|+++|||+|||++|+..+++.+++.|...|.|-|.. .|..+|+++||.....+.
T Consensus 92 V~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~sLGF~r~~r~~ 148 (165)
T KOG3139|consen 92 VDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYESLGFKRDKRLF 148 (165)
T ss_pred echhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHHhcCceEeccee
Confidence 999999999999999999999999999999988776 499999999999877663
No 43
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.43 E-value=1.1e-06 Score=91.03 Aligned_cols=73 Identities=10% Similarity=0.061 Sum_probs=62.2
Q ss_pred CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEc-----cccchhhhhhcCccc
Q 009150 141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWG-----DKESEGFWHKQDTSA 215 (542)
Q Consensus 141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a-----~~~A~~Fw~KqGF~~ 215 (542)
++.+||.+.+...+ ...+|..++|++.+||+|+|+.|++++.+.+++.|+..|.+.. +..|..||+|+||+.
T Consensus 242 d~givG~~~~~~~~---~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~ 318 (320)
T TIGR01686 242 DSGIIGIFVFEKKE---GNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLSFYEQIGFED 318 (320)
T ss_pred CCceEEEEEEEecC---CcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHHHHHHcCCcc
Confidence 56799988765543 3567999999999999999999999999999999999998754 225999999999986
Q ss_pred c
Q 009150 216 D 216 (542)
Q Consensus 216 ~ 216 (542)
.
T Consensus 319 ~ 319 (320)
T TIGR01686 319 E 319 (320)
T ss_pred C
Confidence 4
No 44
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=98.43 E-value=8.6e-07 Score=75.42 Aligned_cols=60 Identities=17% Similarity=0.153 Sum_probs=49.3
Q ss_pred eeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEc-cc-cchhhhhhcCcccccc
Q 009150 159 YAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWG-DK-ESEGFWHKQDTSADTA 218 (542)
Q Consensus 159 ~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a-~~-~A~~Fw~KqGF~~~~~ 218 (542)
+++|..+.+.|++||+|+|+.|+.++.+.+.+.|..-...+. +| .|..||+|.||+...+
T Consensus 21 ~g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~~~l~v~~~N~~s~~ly~klGf~~~~~ 82 (86)
T PF08445_consen 21 DGEIGGVYTLPEHRRRGLGSALVAALARELLERGKTPFLYVDADNEASIRLYEKLGFREIEE 82 (86)
T ss_dssp TCCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSEEEEEEETT-HHHHHHHHHCT-EEEEE
T ss_pred CcEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHcCCEEEEE
Confidence 488999999999999999999999999999999987654333 33 4999999999998764
No 45
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.41 E-value=3.2e-07 Score=84.88 Aligned_cols=78 Identities=23% Similarity=0.232 Sum_probs=68.4
Q ss_pred CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccc
Q 009150 140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSA 215 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~ 215 (542)
..++|||..++.|.. .--.=+-|.-.+|+++||||+||+.|+..|...++++|.++|.|.-+..-..||+|.||+.
T Consensus 62 ~s~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~FYeKcG~s~ 141 (150)
T KOG3396|consen 62 ESEKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVKFYEKCGYSN 141 (150)
T ss_pred CcCeEEEEEEEEEehhhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhhHHHHcCccc
Confidence 467899999999885 1112345888999999999999999999999999999999999999999999999999987
Q ss_pred cc
Q 009150 216 DT 217 (542)
Q Consensus 216 ~~ 217 (542)
..
T Consensus 142 ~~ 143 (150)
T KOG3396|consen 142 AG 143 (150)
T ss_pred cc
Confidence 65
No 46
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=98.40 E-value=1.1e-06 Score=82.22 Aligned_cols=95 Identities=8% Similarity=0.055 Sum_probs=71.7
Q ss_pred CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCcccc
Q 009150 141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTSAD 216 (542)
Q Consensus 141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~~~ 216 (542)
++++||.+.+....++.+.++|.. .|+++|||+|+|+.++..+.+++.+ .|+.+|.+.+.. .|..+++|+||+..
T Consensus 75 ~~~~iG~~~l~~~~~~~~~~~ig~-~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek~Gf~~~ 153 (179)
T PRK10151 75 EDELIGVLSFNRIEPLNKTAYIGY-WLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALRNGFTLE 153 (179)
T ss_pred CCEEEEEEEEEeeccCCCceEEEE-EEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHHCCCEEE
Confidence 578999998766544445788875 6999999999999999999999975 689998665433 49999999999999
Q ss_pred ccccccccCCCCCCCceeEEE
Q 009150 217 TAVSLKFCFPVKPCEKSSLVT 237 (542)
Q Consensus 217 ~~~~~~~~~~~~~c~ea~lm~ 237 (542)
+..+......+. .....+|.
T Consensus 154 g~~~~~~~~~g~-~~D~~~~~ 173 (179)
T PRK10151 154 GCLKQAEYLNGA-YDDVNLYA 173 (179)
T ss_pred eEeccceEECCE-EEEEEEEE
Confidence 888554333332 33344444
No 47
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=98.39 E-value=2.1e-06 Score=75.86 Aligned_cols=74 Identities=19% Similarity=0.214 Sum_probs=62.0
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEccc---cchhhhhhcCcc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRL-QSVGIRTIFCWGDK---ESEGFWHKQDTS 214 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~l-k~~GI~~I~l~a~~---~A~~Fw~KqGF~ 214 (542)
+++++||.+.+.........++|. +.|.++|||+|+|+.++..+.+++ ...|+.+|.+.+.. .|..+++|+||+
T Consensus 65 ~~~~~iG~i~~~~~~~~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 65 DDGEIIGFIGLYNIDKNNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEKLGFE 142 (142)
T ss_dssp TTTEEEEEEEEEEEETTTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHHTT-E
T ss_pred cCCceEEEeeeeecccCCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHHcCCC
Confidence 557899999985554455788898 779999999999999999999999 68999999666655 399999999995
No 48
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.38 E-value=1.7e-06 Score=64.05 Aligned_cols=58 Identities=19% Similarity=0.179 Sum_probs=52.2
Q ss_pred CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 009150 141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC 198 (542)
Q Consensus 141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l 198 (542)
++++||.+.+...+...+.++|..++|+++|||+|+|+.++.++.+++++.|+.++.+
T Consensus 7 ~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 7 DGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred CCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 5689999988777655578999999999999999999999999999999999999875
No 49
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.35 E-value=1.3e-06 Score=96.75 Aligned_cols=88 Identities=18% Similarity=0.228 Sum_probs=70.6
Q ss_pred eEEEeeecccCCCCcEEEEEEeeeccCC------CceeEeeeeee-----------ccCccccChHHHHHHHHHHHHHHc
Q 009150 129 CTLLLKSSFMDDDDVVVAAITYQIVPAD------TQYAEVPLAAV-----------SSIYQHKGVGRLLYLELRKRLQSV 191 (542)
Q Consensus 129 ~~l~~~~~~~~~~~~VIg~i~~~i~~~d------~~~aeI~~~AV-----------~~~~QgkGiG~~Lv~~l~~~lk~~ 191 (542)
++.+-+.. ++++.+||-+-++.-.++ ..-+.|.++.| +++|||+|||+.||+++++.+++.
T Consensus 412 e~F~~y~~--~~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~ 489 (522)
T TIGR01211 412 EFFLSYED--PKNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEE 489 (522)
T ss_pred eEEEEEEc--CCCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHC
Confidence 44444432 245689999977766432 23677888884 489999999999999999999999
Q ss_pred CCcEEEEEccccchhhhhhcCcccccc
Q 009150 192 GIRTIFCWGDKESEGFWHKQDTSADTA 218 (542)
Q Consensus 192 GI~~I~l~a~~~A~~Fw~KqGF~~~~~ 218 (542)
|+.+|.+.++.+|..||+|+||...+.
T Consensus 490 G~~~i~v~s~~~A~~FY~klGf~~~g~ 516 (522)
T TIGR01211 490 GSEKILVISGIGVREYYRKLGYELDGP 516 (522)
T ss_pred CCCEEEEeeCchHHHHHHHCCCEEEcc
Confidence 999999999889999999999998764
No 50
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=98.35 E-value=2.4e-06 Score=81.00 Aligned_cols=96 Identities=8% Similarity=0.030 Sum_probs=71.6
Q ss_pred CCCcEEEEEEeeeccC-CCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCcc
Q 009150 140 DDDVVVAAITYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTS 214 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~-d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~ 214 (542)
+++++||.+.+..... ..+.++|. ++|+++|||+|+|+.++..+++++.+ +|+++|.+.+.. .|..+++|+||+
T Consensus 84 ~~~~~iG~i~l~~~~~~~~~~~eig-~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~Gf~ 162 (194)
T PRK10809 84 DEKEIIGVANFSNVVRGSFHACYLG-YSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLARLGFE 162 (194)
T ss_pred CCCeEEEEEEEEeecCCCeeeEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHHCCCc
Confidence 3568999998876543 22446555 67999999999999999999999987 699999877755 499999999999
Q ss_pred ccccccccccCCCCCCCceeEEE
Q 009150 215 ADTAVSLKFCFPVKPCEKSSLVT 237 (542)
Q Consensus 215 ~~~~~~~~~~~~~~~c~ea~lm~ 237 (542)
..+.......+.+. ...+.+|.
T Consensus 163 ~~g~~~~~~~~~g~-~~d~~~~~ 184 (194)
T PRK10809 163 KEGYAKDYLLIDGQ-WRDHVLTA 184 (194)
T ss_pred EEeeeccccccCCe-EEEEEEee
Confidence 87766544333332 22344555
No 51
>PRK10514 putative acetyltransferase; Provisional
Probab=98.34 E-value=8.2e-07 Score=79.65 Aligned_cols=70 Identities=16% Similarity=0.124 Sum_probs=53.1
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc-ccchhhhhhcCcccccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD-KESEGFWHKQDTSADTA 218 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~-~~A~~Fw~KqGF~~~~~ 218 (542)
+++++||.+.+.. .+|..++|+|+|||+|||++|++++.+.++. +. ..+... ..|..||+|+||+..+.
T Consensus 57 ~~~~~iG~~~~~~-------~~~~~~~v~p~~rgkGig~~Ll~~~~~~~~~--i~-~~v~~~N~~a~~~yek~Gf~~~~~ 126 (145)
T PRK10514 57 ERDQPVGFMLLSG-------GHMEALFVDPDVRGCGVGRMLVEHALSLHPE--LT-TDVNEQNEQAVGFYKKMGFKVTGR 126 (145)
T ss_pred cCCcEEEEEEEec-------CcEeEEEECHHhccCCHHHHHHHHHHHhccc--cE-EEeecCCHHHHHHHHHCCCEEecc
Confidence 4679999886531 2366899999999999999999999987543 22 222333 35999999999998775
Q ss_pred c
Q 009150 219 V 219 (542)
Q Consensus 219 ~ 219 (542)
.
T Consensus 127 ~ 127 (145)
T PRK10514 127 S 127 (145)
T ss_pred c
Confidence 4
No 52
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=98.34 E-value=5.5e-06 Score=78.20 Aligned_cols=136 Identities=16% Similarity=0.100 Sum_probs=93.8
Q ss_pred ceEEeeCCCCccccchhhhHHHHHHHHhhccCCchhhhhcCcccc-ceeeeecccceeEEEeeecccCCCCcEEEEEEee
Q 009150 73 YIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSM-FLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQ 151 (542)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~-~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~ 151 (542)
..+.++.|+|+|+=+ .++.+.-.-.+ +..-.-+.+.+..++ ||.+. -.|..+..+.. .++.++|.+.|.
T Consensus 4 ~~IR~at~~D~~~i~--rLikela~Fek--~~~~v~~te~~l~~~~F~d~~---~~~~~v~~ie~---~~~~~aGf~~yf 73 (163)
T KOG3216|consen 4 IRIRLATPKDCEDIL--RLIKELAEFEK--LEDQVEATEENLARDGFIDPP---FKHWLVAAIET---SGEVVAGFALYF 73 (163)
T ss_pred eEEEecCcccHHHHH--HHHHHHHHHHH--hccchhhchhhhhhhhccCCC---ccEEEEEEEec---CCCceeEEeeee
Confidence 346677788773222 22333222222 111222344444443 66665 24555555543 366899988777
Q ss_pred ecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc---ccchhhhhhcCcccccc
Q 009150 152 IVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD---KESEGFWHKQDTSADTA 218 (542)
Q Consensus 152 i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~---~~A~~Fw~KqGF~~~~~ 218 (542)
..+ .++++.||--+.|.+.|||+|+|+.|++.+-+++.+.|...+..++. +.|..||.|.|++...+
T Consensus 74 ~~ystW~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k~gaq~l~~ 146 (163)
T KOG3216|consen 74 NNYSTWLGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEKVGAQDLKE 146 (163)
T ss_pred cccccccccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHHHhCccccce
Confidence 665 56689999999999999999999999999999999999999854443 36999999999998876
No 53
>PHA01807 hypothetical protein
Probab=98.33 E-value=1.9e-06 Score=81.14 Aligned_cols=70 Identities=14% Similarity=0.085 Sum_probs=56.3
Q ss_pred CCCcEEEEEEeeeccCCCceeEeee---eeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhh
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPL---AAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHK 210 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~---~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K 210 (542)
+++++||.+.+.... +..+++|.. +.|.|+|||+|||+.||.++++.++..|+..+.+.++. .|..||++
T Consensus 60 ~dg~lvG~~~l~~~~-~~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~~ 135 (153)
T PHA01807 60 RDGKLAGIAVLVFED-DPHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYRR 135 (153)
T ss_pred ECCEEEEEEEEEcCC-CcceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHh
Confidence 367999998876554 334555554 69999999999999999999999999999988555544 38899976
No 54
>KOG3548 consensus DNA damage checkpoint protein RHP9/CRB2/53BP1 [Replication, recombination and repair]
Probab=98.32 E-value=1.1e-06 Score=100.23 Aligned_cols=138 Identities=19% Similarity=0.241 Sum_probs=92.1
Q ss_pred CeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-Cc--------------------------eeEEEECCCCCcHHHHHH
Q 009150 398 CFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-ST--------------------------STHVVTGKVRKTLNFLTA 450 (542)
Q Consensus 398 ~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~--------------------------~THLIt~k~~RTlKfL~A 450 (542)
++.|+||+..... +.....+...||.|.+.. .. --.||+..-.||.|||.|
T Consensus 928 ~cvF~lTsa~~sd--~~~r~s~e~~gg~vle~gl~~~Fn~p~~g~~~~lr~Ln~~q~~ks~~qalLIsdth~Rt~KYLea 1005 (1176)
T KOG3548|consen 928 GCVFMLTSANRSD--SASRPSMEKHGGLVLEKGLMNLFNTPFKGGGIVLRQLNSFQERKSNYQALLISDTHYRTHKYLEA 1005 (1176)
T ss_pred ceeEEEeccccch--hhhhhhhhccCChhhhccccccccccccCCcchHHhhhHHhhhccccceeEeehhhhHHHHHHHH
Confidence 5889999987554 356677777888777553 11 125778888999999999
Q ss_pred HhcCCeEeCHHHHHHHHHcCCCCCCCCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCC-----------C
Q 009150 451 LCSGAWIVSPNWLKESFREGRFVDESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAH-----------I 519 (542)
Q Consensus 451 IA~G~wIVSpsWL~dSlk~Gk~LdEe~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~-----------v 519 (542)
||+|+|+|++.||.+|.++++.+|-.+|.|.....-.. ...+.+++. ..++...+++..+++.+- -
T Consensus 1006 LA~giPcVh~~fI~aC~e~nr~Vdy~~YLLpsGyS~rl-ds~l~~~i~--~fn~~~nLkd~~l~vk~~l~~~~v~q~gp~ 1082 (1176)
T KOG3548|consen 1006 LARGIPCVHNTFIQACGEQNRCVDYTDYLLPSGYSIRL-DSQLMPAIE--PFNPSENLKDTTLYVKSTLSAREVTQTGPG 1082 (1176)
T ss_pred HHcCCCcccHHHHHHHHhccccccchhhcccCcccccc-ccccccCcc--ccCchhhccceeeEeeccccceeEEEecCC
Confidence 99999999999999999999999999999987642111 111222110 022222333333333211 1
Q ss_pred CCCHHHHHHHHHhCCCEEecc
Q 009150 520 QPPIKTLSAIVRSAGGNVSSK 540 (542)
Q Consensus 520 ~p~~~~L~~LIeagGG~V~~~ 540 (542)
....+.+..++++||+-++..
T Consensus 1083 ~~f~e~~~e~le~G~aa~vd~ 1103 (1176)
T KOG3548|consen 1083 GTFIEIWKEILELGGAAVVDG 1103 (1176)
T ss_pred cchHHHHHHHHHhhchheecc
Confidence 223577899999999877654
No 55
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=98.30 E-value=1.1e-06 Score=88.37 Aligned_cols=76 Identities=14% Similarity=0.181 Sum_probs=58.2
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCcccccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADTA 218 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~~ 218 (542)
++++|||.+.+...... .++|..++|+|+|||+|||+.|+.++++.+.. --.+++...+ .|..||+|+||.....
T Consensus 53 ~~~~~vG~~~~~~~~~~--~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~~--~~~~~~~~~n~~a~~fy~~~Gf~~~~~ 128 (292)
T TIGR03448 53 DSDPIVGYANLVPARGT--DPAMAELVVHPAHRRRGIGRALIRALLAKGGG--RLRVWAHGDLPAARALASRLGLVPTRE 128 (292)
T ss_pred ECCEEEEEEEEEcCCCC--cceEEEEEECHhhcCCCHHHHHHHHHHHhccC--ceEEEEcCCCHHHHHHHHHCCCEEccE
Confidence 36789999887665433 36799999999999999999999999998652 2233333333 4899999999998875
Q ss_pred c
Q 009150 219 V 219 (542)
Q Consensus 219 ~ 219 (542)
.
T Consensus 129 ~ 129 (292)
T TIGR03448 129 L 129 (292)
T ss_pred E
Confidence 4
No 56
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=98.30 E-value=3e-06 Score=76.59 Aligned_cols=84 Identities=10% Similarity=0.057 Sum_probs=66.1
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTSA 215 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~~ 215 (542)
.+|++||.+.+.........++|..+ +++.+| +|||+.++..+.+++.+ .|+..|.+.+.. .|..||+|+||..
T Consensus 58 ~~g~~vG~~~~~~~~~~~~~~~~g~~-~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~Gf~~ 135 (156)
T TIGR03585 58 QESRPIGVISFTDINLVHKSAFWGIY-ANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEKFGFER 135 (156)
T ss_pred ECCEEEEEEEEEecChhhCeEEEEEE-eChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHHcCCeE
Confidence 46899999887655433345677655 999999 99999999999999885 799999775544 4999999999999
Q ss_pred cccccccccC
Q 009150 216 DTAVSLKFCF 225 (542)
Q Consensus 216 ~~~~~~~~~~ 225 (542)
.+..+.-..+
T Consensus 136 ~g~~~~~~~~ 145 (156)
T TIGR03585 136 EGVFRQGIFK 145 (156)
T ss_pred eeeehhheeE
Confidence 8877444334
No 57
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=98.29 E-value=3e-06 Score=81.51 Aligned_cols=122 Identities=16% Similarity=0.276 Sum_probs=101.0
Q ss_pred hhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeee
Q 009150 88 SKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAV 167 (542)
Q Consensus 88 ~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV 167 (542)
+..+|+|.-.+--.|-|.-. |..|+..-.-| |..-.+|+++.- ....|||-.-+--.+...+-..+..+.|
T Consensus 21 rPELlk~~~~LIN~eWPRS~----TsR~hSL~~Sc--Ds~P~sL~Ll~E---~~~~VigH~rLS~i~n~~~al~VEsVVV 91 (225)
T KOG3397|consen 21 RPELLKESMTLINSEWPRSD----TSREHSLKKSC--DSPPMSLLLLNE---ENDEVLGHSRLSHLPNRDHALWVESVVV 91 (225)
T ss_pred cHHHHHHHHHHHhccCCccc----hhhhhhhhccc--CCCCeeeeeecc---cccceeeeeccccCCCCCceeEEEEEEE
Confidence 57899999999999999877 44554433445 888888988862 4568999876666666667778889999
Q ss_pred ccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccccc
Q 009150 168 SSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAV 219 (542)
Q Consensus 168 ~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~ 219 (542)
+.+.||+|+|++||+.++.+++..|+++++|-+. +..+||+..||+.-+-+
T Consensus 92 ~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~-DQ~~FYe~lGYe~c~Pi 142 (225)
T KOG3397|consen 92 KKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTD-DQCRFYESLGYEKCDPI 142 (225)
T ss_pred ehhhccccHHHHHHHHHHHHHHHhhhhheeeecc-cchhhhhhhcccccCce
Confidence 9999999999999999999999999999999888 67899999999876644
No 58
>PRK01346 hypothetical protein; Provisional
Probab=98.26 E-value=2.6e-06 Score=90.49 Aligned_cols=78 Identities=18% Similarity=0.137 Sum_probs=65.5
Q ss_pred CCCcEEEEEEeeecc---C-C--CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCc
Q 009150 140 DDDVVVAAITYQIVP---A-D--TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDT 213 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~---~-d--~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF 213 (542)
++++|||.+.+.... + + ...++|..++|+|+|||+|||+.||.++++++++.|+..+.|++. ...||+|.||
T Consensus 54 ~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~--~~~~Y~r~Gf 131 (411)
T PRK01346 54 DGDEVVGTAGAFDLRLTVPGGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTAS--EGGIYGRFGY 131 (411)
T ss_pred ECCEEEEEEEEeccccccCCCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECC--chhhHhhCCC
Confidence 467899987765432 1 2 247889999999999999999999999999999999999999877 4689999999
Q ss_pred cccccc
Q 009150 214 SADTAV 219 (542)
Q Consensus 214 ~~~~~~ 219 (542)
......
T Consensus 132 ~~~~~~ 137 (411)
T PRK01346 132 GPATYS 137 (411)
T ss_pred eeccce
Confidence 887654
No 59
>PRK10562 putative acetyltransferase; Provisional
Probab=98.23 E-value=2.6e-06 Score=77.15 Aligned_cols=70 Identities=14% Similarity=0.220 Sum_probs=53.3
Q ss_pred CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCccccccc
Q 009150 141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSADTAV 219 (542)
Q Consensus 141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~~~~ 219 (542)
++++||.+.+.. ..+|..++|+++|||+|||+.|++++.+.+..+ .+.+...+ .|..||+|+||+.++..
T Consensus 56 ~~~~iG~~~~~~------~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~---~~~v~~~N~~s~~~y~k~Gf~~~~~~ 126 (145)
T PRK10562 56 DGKLLGFVSVLE------GRFVGALFVAPKAVRRGIGKALMQHVQQRYPHL---SLEVYQKNQRAVNFYHAQGFRIVDSA 126 (145)
T ss_pred CCEEEEEEEEee------ccEEEEEEECHHHcCCCHHHHHHHHHHhhCCeE---EEEEEcCChHHHHHHHHCCCEEcccc
Confidence 568999987632 135888999999999999999999998864332 22233333 59999999999998854
No 60
>KOG3226 consensus DNA repair protein [Replication, recombination and repair]
Probab=98.18 E-value=1.7e-06 Score=90.86 Aligned_cols=87 Identities=18% Similarity=0.308 Sum_probs=79.4
Q ss_pred CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCC
Q 009150 396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVD 474 (542)
Q Consensus 396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~Ld 474 (542)
.++.++++|||...+ |..|....-.||+++-.++ ..+||||+.-. .|.||-...-.|-.||+-+||.+|.++.++|+
T Consensus 318 L~GVV~VlSGfqNP~-Rs~LRskAl~LGAkY~pDW~~gsThLICAF~-NTPKy~QV~g~Gg~IV~keWI~~Cy~~kk~lp 395 (508)
T KOG3226|consen 318 LEGVVFVLSGFQNPE-RSTLRSKALTLGAKYQPDWNAGSTHLICAFP-NTPKYRQVEGNGGTIVSKEWITECYAQKKLLP 395 (508)
T ss_pred hhceEEEEecccCch-HHHHHHHHHhhcccccCCcCCCceeEEEecC-CCcchhhcccCCceEeeHHHHHHHHHHHhhcc
Confidence 467899999999887 7889999999999999998 88999999864 59999999999999999999999999999999
Q ss_pred CCCcccCCch
Q 009150 475 ESSYMLNDDD 484 (542)
Q Consensus 475 Ee~YeL~d~~ 484 (542)
...|.+...+
T Consensus 396 ~rrYlm~~~~ 405 (508)
T KOG3226|consen 396 IRRYLMHAGK 405 (508)
T ss_pred HHHHHhcCCC
Confidence 9999987654
No 61
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=98.13 E-value=5.2e-06 Score=80.77 Aligned_cols=78 Identities=21% Similarity=0.264 Sum_probs=68.7
Q ss_pred CcEEEEEEeeecc-CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCccccc
Q 009150 142 DVVVAAITYQIVP-ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDTSADT 217 (542)
Q Consensus 142 ~~VIg~i~~~i~~-~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF~~~~ 217 (542)
+.+||-+.+++.- .+..+.|++++-|.+.|||+|||+.|+.+|...+.....++|+|.++. .|.+||+++||.+..
T Consensus 102 ~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~~gf~~~~ 181 (202)
T KOG2488|consen 102 SKLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYHRLGFVVDE 181 (202)
T ss_pred CceeeEEEEEEEcccCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHHHcCcccCC
Confidence 3789988887765 455799999999999999999999999999999999999999887777 499999999999876
Q ss_pred cc
Q 009150 218 AV 219 (542)
Q Consensus 218 ~~ 219 (542)
+-
T Consensus 182 ~s 183 (202)
T KOG2488|consen 182 ES 183 (202)
T ss_pred CC
Confidence 53
No 62
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.05 E-value=1.5e-05 Score=67.06 Aligned_cols=67 Identities=13% Similarity=0.232 Sum_probs=56.0
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQ 211 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~Kq 211 (542)
++|+.+|-+.|.. .+ ....|.|.-|.+++||||||+.|++++.+++++.|++-+-++.+ +..|++|+
T Consensus 6 ~~g~~~a~l~Y~~--~~-~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~kv~p~C~y--~~~~~~~h 72 (78)
T PF14542_consen 6 DDGEEIAELTYRE--DG-GVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLKVVPTCSY--VAKYFRRH 72 (78)
T ss_dssp SSTTEEEEEEEEE--SS-SEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-EEEETSHH--HHHHHHH-
T ss_pred ECCEEEEEEEEEe--CC-CEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCEEEEECHH--HHHHHHhC
Confidence 4588999999977 23 35559999999999999999999999999999999999888888 88888775
No 63
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=97.99 E-value=2.8e-05 Score=70.65 Aligned_cols=80 Identities=16% Similarity=0.147 Sum_probs=62.6
Q ss_pred CCCcEEEEEEeeecc----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEccc---cchhhhhhc
Q 009150 140 DDDVVVAAITYQIVP----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV-GIRTIFCWGDK---ESEGFWHKQ 211 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~-GI~~I~l~a~~---~A~~Fw~Kq 211 (542)
.+|+++|-+.+.-.. .+..+..|..++|+++++|+|+|+.++..+.+.+.+. ++..|.+.+.. .+...|+|.
T Consensus 55 ~dg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~ 134 (152)
T PF13523_consen 55 DDGEPIGYFEIYWPDEDYDADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEKA 134 (152)
T ss_dssp ETTEEEEEEEEEEGGGSS---TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHHT
T ss_pred ECCEEEEEEEEecccccccCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHHc
Confidence 377999977553311 1335666999999999999999999999999999987 89999887765 399999999
Q ss_pred Cccccccc
Q 009150 212 DTSADTAV 219 (542)
Q Consensus 212 GF~~~~~~ 219 (542)
||..+++.
T Consensus 135 GF~~~g~~ 142 (152)
T PF13523_consen 135 GFRKVGEF 142 (152)
T ss_dssp T-EEEEEE
T ss_pred CCEEeeEE
Confidence 99999886
No 64
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=97.89 E-value=2.8e-05 Score=79.13 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=65.5
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEE-ccc-cchhhhhhcCccccc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCW-GDK-ESEGFWHKQDTSADT 217 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~-a~~-~A~~Fw~KqGF~~~~ 217 (542)
++|+||+..--.-..+ .|++|.-.++.|+||||||++.|+..+.+.+-+.|-..++.+ ++| .|..-|+|.||+.++
T Consensus 184 ~d~~iVa~A~t~a~~~--~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~L~~~~~N~~A~~iY~riGF~~~g 261 (268)
T COG3393 184 GDGKIVAKAETAAENP--AYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPCLFVNSDNPVARRIYQRIGFREIG 261 (268)
T ss_pred cCCcEEEeeeccccCC--cceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCeeEEEEecCCHHHHHHHHHhCCeecc
Confidence 4569999875444444 599999999999999999999999999999999997777555 344 699999999999988
Q ss_pred cc
Q 009150 218 AV 219 (542)
Q Consensus 218 ~~ 219 (542)
+.
T Consensus 262 ~~ 263 (268)
T COG3393 262 EF 263 (268)
T ss_pred eE
Confidence 54
No 65
>KOG1929 consensus Nucleotide excision repair factor NEF2, RAD4/CUT5 component [Replication, recombination and repair]
Probab=97.87 E-value=4.2e-05 Score=88.26 Aligned_cols=127 Identities=16% Similarity=0.183 Sum_probs=101.1
Q ss_pred CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCC
Q 009150 396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVD 474 (542)
Q Consensus 396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~Ld 474 (542)
-.++.|..|++.+.. ++.|...+.++||.+..+. ..|||||+++.. +-|+..|-..+++|++++|+...+..... .
T Consensus 10 ~~~v~~~~t~i~p~~-~~~l~~~~~~~Gg~~~~~~t~~~thli~~~~~-s~~~~~a~~~~~~~~~~~wi~~~~d~~~~-~ 86 (811)
T KOG1929|consen 10 MSGVTFSPTGINPIK-REELSKKFIKLGGIDFKDFTPSVTHLIVGSVT-SSKYAAAHRFDIKVLDSSWIDYIYDLWLL-N 86 (811)
T ss_pred cCCceeccCcCCHHH-HHHHHHHHHhcCceeeeccCCcCceeeccccc-ccchhhhhcCCCceecchHHHHHHHHhhh-h
Confidence 345778889998655 7899999999999999987 899999999976 56778888889999999999999888775 2
Q ss_pred CCCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150 475 ESSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY 541 (542)
Q Consensus 475 Ee~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L 541 (542)
..=.+.+.. + .....+.|.|+.|++++.....+..+..+|-..||+....|
T Consensus 87 -~e~~~~~~l--------------~-~~~~~p~~~~~~Vc~tgl~~~eK~ei~~~v~k~gg~~~~~L 137 (811)
T KOG1929|consen 87 -KEIRLLDPL--------------R-DTMKCPGFFGLKVCLTGLSGDEKSEIKILVPKHGGTLHRSL 137 (811)
T ss_pred -ccCccCccc--------------h-hhhcCCcccceEEEecccchHHHHHHHHHhhhcccEEehhh
Confidence 211111211 1 12347789999999999887778999999999999987764
No 66
>PLN03122 Poly [ADP-ribose] polymerase; Provisional
Probab=97.86 E-value=4.3e-05 Score=88.51 Aligned_cols=86 Identities=20% Similarity=0.192 Sum_probs=75.0
Q ss_pred CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCceeEEEECCCC--C--cHHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150 395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVR--K--TLNFLTALCSGAWIVSPNWLKESFREG 470 (542)
Q Consensus 395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~~THLIt~k~~--R--TlKfL~AIA~G~wIVSpsWL~dSlk~G 470 (542)
+..+..|+|||.... .|..+++.|+.+||++.+.+..+||+|+.... + +-|+-.|...|++||+.+||.++++.+
T Consensus 189 pL~G~~fviTGtl~~-sr~elK~~Ie~~GGkvsssVs~~T~lIvt~~ev~k~gsSKlkkAk~lgIpIVsEd~L~d~i~~~ 267 (815)
T PLN03122 189 PFSGMMISLSGRLSR-THQYWKKDIEKHGGKVANSVEGVTCLVVSPAERERGGSSKIAEAMERGIPVVREAWLIDSIEKQ 267 (815)
T ss_pred CcCCcEEEEeCCCCC-CHHHHHHHHHHcCCEEccccccceEEEEcCccccccCccHHHHHHHcCCcCccHHHHHHHHhcC
Confidence 356789999998765 47889999999999999999999999886522 2 368899999999999999999999999
Q ss_pred CCCCCCCcccC
Q 009150 471 RFVDESSYMLN 481 (542)
Q Consensus 471 k~LdEe~YeL~ 481 (542)
+.+++..|.+.
T Consensus 268 k~~~~~~y~l~ 278 (815)
T PLN03122 268 EAQPLEAYDVV 278 (815)
T ss_pred Ccccchhhhhc
Confidence 99999999874
No 67
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=97.81 E-value=3.8e-05 Score=75.50 Aligned_cols=76 Identities=20% Similarity=0.202 Sum_probs=49.8
Q ss_pred ceeEeeeeeeccCccccChHHHHHHHHHHHH-------------------------HHcCCcEE-EEEccc-cchhhhhh
Q 009150 158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRL-------------------------QSVGIRTI-FCWGDK-ESEGFWHK 210 (542)
Q Consensus 158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~l-------------------------k~~GI~~I-~l~a~~-~A~~Fw~K 210 (542)
.++-|.-.||+|++|++|||+++++.+.+++ +..++..+ ..++.. +=-.||.|
T Consensus 89 ~g~RIvRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~t~~Ll~FW~k 168 (196)
T PF13718_consen 89 SGARIVRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGATPELLKFWQK 168 (196)
T ss_dssp EEEEEEEEEE-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEEEE--HHHHHHHHC
T ss_pred cceeEEEEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCCCHHHHHHHHH
Confidence 5667899999999999999999999999999 46788887 333332 35699999
Q ss_pred cCccccccc-cccccCCCCCCCceeEEE
Q 009150 211 QDTSADTAV-SLKFCFPVKPCEKSSLVT 237 (542)
Q Consensus 211 qGF~~~~~~-~~~~~~~~~~c~ea~lm~ 237 (542)
+||..+--- .+...-++. +++|+
T Consensus 169 ~gf~pv~l~~~~n~~SGe~----S~iml 192 (196)
T PF13718_consen 169 NGFVPVYLGQTRNEASGEH----SAIML 192 (196)
T ss_dssp TT-EEEEE-SS--TTT-------EEEEE
T ss_pred CCcEEEEEecCcccccCce----eeeEE
Confidence 999998855 555566776 88886
No 68
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=97.81 E-value=4e-05 Score=71.96 Aligned_cols=77 Identities=16% Similarity=0.193 Sum_probs=66.4
Q ss_pred CCcEEEEEEeeeccCCCceeE--eeeeeeccCccccChHHHHHHHHHHHHHHcCCcE-EEEEccccchhhhhhcCccccc
Q 009150 141 DDVVVAAITYQIVPADTQYAE--VPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRT-IFCWGDKESEGFWHKQDTSADT 217 (542)
Q Consensus 141 ~~~VIg~i~~~i~~~d~~~ae--I~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~-I~l~a~~~A~~Fw~KqGF~~~~ 217 (542)
+|+++|+. ++.|++.+|.+ |+-++|++++||+|+|+.||..+++.+++..-.+ +.+-|-.--..||..-||....
T Consensus 58 ~g~LvAya--RLl~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahLq~fYa~~GFv~~~ 135 (155)
T COG2153 58 DGELVAYA--RLLPPGAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHLQDFYASFGFVRVG 135 (155)
T ss_pred CCeEEEEE--ecCCCCCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHHHHHHHHhCcEEcC
Confidence 78999987 88888887777 9999999999999999999999999999986443 4555554589999999999988
Q ss_pred cc
Q 009150 218 AV 219 (542)
Q Consensus 218 ~~ 219 (542)
+.
T Consensus 136 e~ 137 (155)
T COG2153 136 EE 137 (155)
T ss_pred ch
Confidence 76
No 69
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.80 E-value=0.00013 Score=70.26 Aligned_cols=97 Identities=14% Similarity=0.110 Sum_probs=71.9
Q ss_pred CCCCcEEEEEEeeeccCCCceeE--eeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---cchhhhhhcCc
Q 009150 139 DDDDVVVAAITYQIVPADTQYAE--VPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---ESEGFWHKQDT 213 (542)
Q Consensus 139 ~~~~~VIg~i~~~i~~~d~~~ae--I~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~KqGF 213 (542)
.++|+|+|-+.+..+.+-.-|.. -...-|+++.||+|||++|+..|.+++...|++.+...... .|.+|+++.||
T Consensus 59 ~~~g~v~G~a~~~~fr~r~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~~~GF 138 (169)
T COG1247 59 EEDGKVLGYASAGPFRERPAYRHTVELSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIALHEKLGF 138 (169)
T ss_pred cCCCeEEEEEEeeeccCccccceEEEEEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHHHHHCCC
Confidence 35689999888877763332333 35567899999999999999999999999999888443332 49999999999
Q ss_pred ccccccccc-ccCCCCCCCceeEEE
Q 009150 214 SADTAVSLK-FCFPVKPCEKSSLVT 237 (542)
Q Consensus 214 ~~~~~~~~~-~~~~~~~c~ea~lm~ 237 (542)
+..+....- ..|+. --+.++|.
T Consensus 139 ~~~G~~~~vg~k~g~--wld~~~~~ 161 (169)
T COG1247 139 EEVGTFPEVGDKFGR--WLDLVLMQ 161 (169)
T ss_pred EEeccccccccccce--EEeeeeee
Confidence 999977333 22322 23366666
No 70
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=97.75 E-value=0.00016 Score=65.92 Aligned_cols=86 Identities=15% Similarity=0.084 Sum_probs=69.7
Q ss_pred CCcEEEEEEeeeccC--CCceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCcc
Q 009150 141 DDVVVAAITYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTS 214 (542)
Q Consensus 141 ~~~VIg~i~~~i~~~--d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~ 214 (542)
++++||.+.+...+. +...++|.... +++++|+|+|+..+..+.+++-+ .|+.+|.+.++. .|....+|+||+
T Consensus 76 ~~~~iG~~~~~~~~~~~~~~~~~ig~~l-~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~Gf~ 154 (187)
T COG1670 76 DGELIGVIGLSDIDRAANGDLAEIGYWL-DPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKLGFR 154 (187)
T ss_pred CCeEEEEEEEEEeccccccceEEEEEEE-ChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHcCCh
Confidence 568999999987762 34577665554 99999999999999999999887 899999766655 399999999999
Q ss_pred ccccccccccCCC
Q 009150 215 ADTAVSLKFCFPV 227 (542)
Q Consensus 215 ~~~~~~~~~~~~~ 227 (542)
..+..+....+.+
T Consensus 155 ~eg~~~~~~~~~g 167 (187)
T COG1670 155 LEGELRQHEFIKG 167 (187)
T ss_pred hhhhhhhceeeCC
Confidence 9998855545554
No 71
>PLN03123 poly [ADP-ribose] polymerase; Provisional
Probab=97.65 E-value=0.00011 Score=86.89 Aligned_cols=88 Identities=14% Similarity=0.173 Sum_probs=74.9
Q ss_pred CCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECC--CCCcHHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150 394 SNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGK--VRKTLNFLTALCSGAWIVSPNWLKESFREG 470 (542)
Q Consensus 394 s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k--~~RTlKfL~AIA~G~wIVSpsWL~dSlk~G 470 (542)
.+.++++|.++|-.+.. +.++++.|+.+||++...+ ..|||||+.. -++..|+-.|-..|++||+.+||.+|.+.+
T Consensus 392 ~~l~~~~i~i~G~~~~~-~~~~k~~Ie~~GG~~s~~v~~~~t~l~tt~e~~k~~~kv~qAk~~~ipIVsedwL~ds~~~~ 470 (981)
T PLN03123 392 EFLGDLKVSIVGASKEK-VTEWKAKIEEAGGVFHATVKKDTNCLVVCGELDDEDAEMRKARRMKIPIVREDYLVDCFKKK 470 (981)
T ss_pred CCcCCeEEEEecCCCCc-HHHHHHHHHhcCCEEeeeccCCceEEEccHHhhhcchHHHHHHhcCCCcccHHHHHHHHhcc
Confidence 44567999999977654 4689999999999999997 7899999875 356678889999999999999999999999
Q ss_pred CCCCCCCcccCC
Q 009150 471 RFVDESSYMLND 482 (542)
Q Consensus 471 k~LdEe~YeL~d 482 (542)
..+++..|.+..
T Consensus 471 ~~~p~~~y~~~~ 482 (981)
T PLN03123 471 KKLPFDKYKLEA 482 (981)
T ss_pred ccCcchhhhhcc
Confidence 988888886653
No 72
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.55 E-value=0.00024 Score=73.40 Aligned_cols=82 Identities=17% Similarity=0.163 Sum_probs=69.2
Q ss_pred ceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchh
Q 009150 127 KYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEG 206 (542)
Q Consensus 127 ~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~ 206 (542)
.-+++..+. ++++||||..+ .- .-|+.+||++.+||-|+.=+|+.||...+-++|..|+|+++-+....
T Consensus 35 ve~~v~~~~----~~~~iiacGsi--aG-----nvikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~ 103 (352)
T COG3053 35 VEYFVAIYR----DNEEIIACGSI--AG-----NVIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYAA 103 (352)
T ss_pred ceEEEEEEc----CCCcEEEeccc--cc-----ceeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhHHH
Confidence 344555554 56899988533 21 22899999999999999999999999999999999999999999999
Q ss_pred hhhhcCccccccc
Q 009150 207 FWHKQDTSADTAV 219 (542)
Q Consensus 207 Fw~KqGF~~~~~~ 219 (542)
||+-+||..+...
T Consensus 104 lFk~~GF~~i~~~ 116 (352)
T COG3053 104 LFKQCGFSEIASA 116 (352)
T ss_pred HHHhCCceEeecc
Confidence 9999999998755
No 73
>KOG1929 consensus Nucleotide excision repair factor NEF2, RAD4/CUT5 component [Replication, recombination and repair]
Probab=97.54 E-value=0.00042 Score=80.19 Aligned_cols=141 Identities=16% Similarity=0.127 Sum_probs=105.3
Q ss_pred CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCC
Q 009150 396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVD 474 (542)
Q Consensus 396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~Ld 474 (542)
-.+.+|++||+...+ |.++..+|-++||...... ..++|++.....-|.||-+|+-..++||+.+|+++|...+..++
T Consensus 104 ~~~~~Vc~tgl~~~e-K~ei~~~v~k~gg~~~~~L~s~v~~~~~~~~~~~~kYe~al~wn~~v~~~~w~~~s~~~~~~~~ 182 (811)
T KOG1929|consen 104 FFGLKVCLTGLSGDE-KSEIKILVPKHGGTLHRSLSSDVNSLKILPEVKTEKYEQALKWNIPVVSDDWLFDSIEKTAVLE 182 (811)
T ss_pred ccceEEEecccchHH-HHHHHHHhhhcccEEehhhhhhhheeeeccccchHHHHHHHhhCCccccHHHHhhhhccccccc
Confidence 346899999999876 6889999999999999887 67788877776667999999999999999999999999999999
Q ss_pred CCCcccCCch--hhh--------------------hcCCChHHHHHH----hhcCCCCCCCCeEEEEeCCCCCCHHHHHH
Q 009150 475 ESSYMLNDDD--YVL--------------------KYRSELKDSVLR----AKARPGGLLRGYNIIMAAHIQPPIKTLSA 528 (542)
Q Consensus 475 Ee~YeL~d~~--~e~--------------------~~g~~L~~sl~r----Ar~~~~~LF~G~~f~Is~~v~p~~~~L~~ 528 (542)
++.|++.... .+. .|+.+ ....+ +......+..++.++.+......++.+.+
T Consensus 183 ~~~~e~~~~~~~is~~~~~~~~~~~~~~~s~t~~~~~~~~--~~~~n~~~~p~~a~~~~~~~c~v~~s~~~~~~~s~l~r 260 (811)
T KOG1929|consen 183 TKPYEGAPVAEAISGPIGSTLPKEILDGDSRTANDTWSTS--KVVTNIKVLPFQAKIGNLDDCLVETSGTTSRNRSALSR 260 (811)
T ss_pred ccccccccccceeccCCccccccccccccchhhhccccch--hcccccccchhhhhccccccceeeecCCcccchhHhHH
Confidence 9999987621 000 01000 00000 00001225667788887766667899999
Q ss_pred HHHhCCCEEec
Q 009150 529 IVRSAGGNVSS 539 (542)
Q Consensus 529 LIeagGG~V~~ 539 (542)
++..+||.-+.
T Consensus 261 ~~~~g~~~~~~ 271 (811)
T KOG1929|consen 261 LSNNGGSLRFL 271 (811)
T ss_pred hhhcccceeec
Confidence 99999887543
No 74
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.39 E-value=0.00016 Score=56.40 Aligned_cols=44 Identities=20% Similarity=0.225 Sum_probs=40.5
Q ss_pred eeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCc
Q 009150 165 AAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDT 213 (542)
Q Consensus 165 ~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF 213 (542)
++|++++||+|||+.|++++.+.++..|+. ....+..||.++||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~-----~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS-----LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce-----ehHHHHHHHHhcCC
Confidence 999999999999999999999999998887 44458999999999
No 75
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.30 E-value=0.00037 Score=61.68 Aligned_cols=60 Identities=15% Similarity=0.161 Sum_probs=53.6
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD 201 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~ 201 (542)
++|..+|.++|....++ ..-|.|.-|++.+||||+|++|+.++.+.+++.|++-|=++.+
T Consensus 22 ~~G~~~~e~~y~~~~~~--~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kiiP~Csf 81 (99)
T COG2388 22 DEGEVIGEATYYDRGEN--LIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKIIPLCSF 81 (99)
T ss_pred cCCcEEEEEEEecCCCC--EEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeEcccchH
Confidence 67889999988777655 6669999999999999999999999999999999998877774
No 76
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=97.24 E-value=0.00042 Score=67.74 Aligned_cols=79 Identities=15% Similarity=0.255 Sum_probs=63.5
Q ss_pred CCcEEEEEEeeeccCCCc--------eeEeeeeeeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEc---cccchhhh
Q 009150 141 DDVVVAAITYQIVPADTQ--------YAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG-IRTIFCWG---DKESEGFW 208 (542)
Q Consensus 141 ~~~VIg~i~~~i~~~d~~--------~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~G-I~~I~l~a---~~~A~~Fw 208 (542)
++..||++.......-++ +.+|-++.|-+.||.+|||+.|+++++++..... ++.|++.+ ++.|..||
T Consensus 63 ~~~~v~a~~~k~~~~~~~~~r~~~~~~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y 142 (187)
T KOG3138|consen 63 NEIAVGAVACKLIKFVQNAKRLFGNRVIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFY 142 (187)
T ss_pred ccccccceeeeehhhhhhhhhhhccceeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHH
Confidence 445666666655552222 5889999999999999999999999999999988 77775543 44599999
Q ss_pred hhcCccccccc
Q 009150 209 HKQDTSADTAV 219 (542)
Q Consensus 209 ~KqGF~~~~~~ 219 (542)
++.||+.+...
T Consensus 143 ~~~gF~~~~~~ 153 (187)
T KOG3138|consen 143 EKRGFEIVERL 153 (187)
T ss_pred HhcCceEeecc
Confidence 99999999876
No 77
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=96.91 E-value=0.0022 Score=61.41 Aligned_cols=126 Identities=12% Similarity=0.102 Sum_probs=85.6
Q ss_pred chhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeecc-CC-C-ceeEee
Q 009150 87 CSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVP-AD-T-QYAEVP 163 (542)
Q Consensus 87 ~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~-~d-~-~~aeI~ 163 (542)
.|.|+..|...+.---|-+.| ..|.-.-.|-..--.-.+-++++|.+|+|||-+.--.+- |+ . --+.|.
T Consensus 4 iR~ar~~DL~~mQ~~Nl~~lp--------ENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhIt 75 (193)
T KOG3235|consen 4 IRRARPDDLLEMQHCNLLNLP--------ENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHIT 75 (193)
T ss_pred cccCCHHHHHHhhhcccccCc--------HHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeE
Confidence 456677777766654444444 333322222221122234456667899999987666554 22 2 367899
Q ss_pred eeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhh-hcCcccccccc
Q 009150 164 LAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWH-KQDTSADTAVS 220 (542)
Q Consensus 164 ~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~-KqGF~~~~~~~ 220 (542)
.+||..+||+.|||++||+.....+.+ .+-..|-|...+ .|.+.|+ ..||.+.+...
T Consensus 76 SlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl~F~v~eve~ 137 (193)
T KOG3235|consen 76 SLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTLGFVVCEVEP 137 (193)
T ss_pred EeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhhccceEEeeccc
Confidence 999999999999999999987776665 467778777666 4889999 99999887653
No 78
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=96.91 E-value=0.00077 Score=77.54 Aligned_cols=72 Identities=18% Similarity=0.185 Sum_probs=55.5
Q ss_pred EeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEE-EEccc-cchhhhhhcCccccccc-cccccCCCCCCCceeEEE
Q 009150 161 EVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIF-CWGDK-ESEGFWHKQDTSADTAV-SLKFCFPVKPCEKSSLVT 237 (542)
Q Consensus 161 eI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~-l~a~~-~A~~Fw~KqGF~~~~~~-~~~~~~~~~~c~ea~lm~ 237 (542)
-|.-.||+|++|++|||+++++++.++++ .|+..+- -++.. .=-.||.||||.++.-- .|-+.=+++ +++|.
T Consensus 533 RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG~t~~L~rFW~rnGF~pVhls~~rn~~SGey----s~i~l 607 (758)
T COG1444 533 RIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFGYTEELLRFWLRNGFVPVHLSPTRNASSGEY----TAIVL 607 (758)
T ss_pred eEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeeccCCCHHHHHHHHHcCeEEEEecCccCcCCCce----eEEEE
Confidence 47789999999999999999999999997 4555551 12222 35789999999999865 555666776 66666
No 79
>KOG3524 consensus Predicted guanine nucleotide exchange factor (PEBBLE) [Signal transduction mechanisms]
Probab=96.88 E-value=0.001 Score=75.01 Aligned_cols=122 Identities=18% Similarity=0.325 Sum_probs=92.1
Q ss_pred CCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCC
Q 009150 397 KCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDE 475 (542)
Q Consensus 397 k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdE 475 (542)
+....+|||+....+ .+..++..|||.|..+. ..+||+|+.... ..|+-.|+.. .+++.|.||.++++...|++-
T Consensus 120 ~~vvlcfTg~rkk~e--~lv~lvh~mgg~irkd~nsktthli~n~s~-gek~~~a~t~-~~~~rp~wv~~aw~~rn~~yf 195 (850)
T KOG3524|consen 120 KDVVMCFTGERKKKE--ELVDLVHYMGGSIRKDTNSKTTHLIANKVE-GEKQSIALVG-VPTMRPDWVTEAWKHRNDSYF 195 (850)
T ss_pred cCceeeeeccchhhH--HHHHHHHHhcceeEeeeccCceEEEeeccc-ceEEEEEeec-cceechHhhhhhhcCcchhhh
Confidence 346788999987653 78999999999999886 899999999865 4566666555 999999999999998877642
Q ss_pred CCcccCCchhhhhcCCChHHHHHHhhcCCCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEec
Q 009150 476 SSYMLNDDDYVLKYRSELKDSVLRAKARPGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSS 539 (542)
Q Consensus 476 e~YeL~d~~~e~~~g~~L~~sl~rAr~~~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~ 539 (542)
.|..+.+. ..++...|.|..|++.+.-+-..+.+.+.++--||....
T Consensus 196 ---da~~~~f~--------------d~hrl~~feg~~~~f~gF~~ee~~~m~~sle~~gg~~a~ 242 (850)
T KOG3524|consen 196 ---DAMEPCFV--------------DKHRLGVFEGLSLFFHGFKQEEIDDMLRSLENTGGKLAP 242 (850)
T ss_pred ---hhhccchh--------------hhhccccccCCeEeecCCcHHHHHHHHHHHHhcCCcccC
Confidence 22222211 223467899999999877655567788888888987653
No 80
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=96.83 E-value=0.0033 Score=60.04 Aligned_cols=81 Identities=15% Similarity=0.117 Sum_probs=64.0
Q ss_pred CCCCcEEEEEEeeeccCCCce-eEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE---EccccchhhhhhcCcc
Q 009150 139 DDDDVVVAAITYQIVPADTQY-AEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC---WGDKESEGFWHKQDTS 214 (542)
Q Consensus 139 ~~~~~VIg~i~~~i~~~d~~~-aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l---~a~~~A~~Fw~KqGF~ 214 (542)
+.+++|.|-|.+.+.-.+++. +-+--++|.|+||+.|+|+.||+.+++-....+-..|-| ..++-|..||+|+||.
T Consensus 48 ~p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkLGY~ 127 (173)
T KOG3234|consen 48 APTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKLGYS 127 (173)
T ss_pred CCCCceEEEEeeeccccCcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHhcCce
Confidence 356789998888776655432 447779999999999999999999999988876555533 3344599999999999
Q ss_pred ccccc
Q 009150 215 ADTAV 219 (542)
Q Consensus 215 ~~~~~ 219 (542)
+...+
T Consensus 128 ~YR~V 132 (173)
T KOG3234|consen 128 VYRTV 132 (173)
T ss_pred EEEee
Confidence 98876
No 81
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=96.48 E-value=0.035 Score=51.45 Aligned_cols=107 Identities=21% Similarity=0.267 Sum_probs=64.1
Q ss_pred hhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeec
Q 009150 89 KSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVS 168 (542)
Q Consensus 89 ~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~ 168 (542)
-..+-|...|| |--. .++|... ++..+.-..--+ +++++|++-..+.- +.+.|..++|.
T Consensus 12 ~Qd~iDL~KIw----p~~~--------~~~l~~~-l~~~~~l~aArF-----NdRlLgAv~v~~~~---~~~~L~~l~VR 70 (128)
T PF12568_consen 12 EQDRIDLAKIW----PQQD--------PEQLEQW-LDEGHRLFAARF-----NDRLLGAVKVTISG---QQAELSDLCVR 70 (128)
T ss_dssp HHHHHHHHHH-----TTS-------------------SSEEEEEEEE-----TTEEEEEEEEEEET---TEEEEEEEEE-
T ss_pred HHHHHHHHHhC----CCCC--------HHHHHHH-hccCCeEEEEEe-----chheeeeEEEEEcC---cceEEeeEEEe
Confidence 34556777888 5555 5556555 444443333333 67999999666642 58899999999
Q ss_pred cCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc-------chhhhhhcCcccccc
Q 009150 169 SIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE-------SEGFWHKQDTSADTA 218 (542)
Q Consensus 169 ~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~-------A~~Fw~KqGF~~~~~ 218 (542)
+-=|++|+|..|++++.+++ -+|.+..+..... -.+|-.-+||....+
T Consensus 71 evTRrRGVG~yLlee~~rq~--p~i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~~~ 125 (128)
T PF12568_consen 71 EVTRRRGVGLYLLEEVLRQL--PDIKHWWLADEGVEPQDRAVMAAFMQACGFSAQSD 125 (128)
T ss_dssp TT-SSSSHHHHHHHHHHHHS---S--EEEE--TT-S--THHHHHHHHHHHT-EE-SS
T ss_pred eccccccHHHHHHHHHHHHC--CCCcEEEEecCCCcccchHHHHHHHHHcCccccCC
Confidence 99999999999999999998 4567766655532 348999999977654
No 82
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=96.11 E-value=0.014 Score=56.47 Aligned_cols=73 Identities=18% Similarity=0.195 Sum_probs=55.7
Q ss_pred CCCcEEEEEEeeeccCCCceeEeee--eeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc---chhhhhhcC
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPL--AAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE---SEGFWHKQD 212 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~--~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~KqG 212 (542)
+|+++||.|.++-.=.+.-+-+-+| ..|.|+.||+|+|+.+++-.++.++++||.+|.+.++.+ |..-=.++|
T Consensus 76 ~d~~ivG~i~lRh~Ln~~ll~~gGHIGY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI~~NG 153 (174)
T COG3981 76 EDGQIVGFINLRHQLNDFLLEEGGHIGYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVIEANG 153 (174)
T ss_pred cCCcEEEEEEeeeecchHHHhcCCcccceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHHHhcC
Confidence 4789999998776543321111222 479999999999999999999999999999998888873 555555555
No 83
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=96.05 E-value=0.0088 Score=63.51 Aligned_cols=58 Identities=17% Similarity=0.153 Sum_probs=54.6
Q ss_pred ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccc
Q 009150 158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADT 217 (542)
Q Consensus 158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~ 217 (542)
..+.|..+|+.|+|||+|.-++|+.+.++..++.|+.-.+|... +.+||+|-||+.-.
T Consensus 69 ~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~P~--s~~iYrKfGye~as 126 (389)
T COG4552 69 PTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALHPF--SGGIYRKFGYEYAS 126 (389)
T ss_pred eccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEeccC--chhhHhhccccccc
Confidence 67889999999999999999999999999999999999999998 89999999998644
No 84
>PRK06195 DNA polymerase III subunit epsilon; Validated
Probab=95.83 E-value=0.035 Score=57.91 Aligned_cols=73 Identities=14% Similarity=0.061 Sum_probs=59.3
Q ss_pred CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCC--------CCcHHHHHHHhc-----CCeEeCH
Q 009150 395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKV--------RKTLNFLTALCS-----GAWIVSP 460 (542)
Q Consensus 395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~--------~RTlKfL~AIA~-----G~wIVSp 460 (542)
+..+-+|+|||....-.|.+++++++.+||.|.+++ .+||+||++.. .-+-|+-.|... |++|++.
T Consensus 220 ~l~g~~~vfTG~l~~~~R~~~~~~~~~~Gg~v~~sVs~~t~~lV~G~~~~~~~~~~~~~~K~~kA~~l~~~g~~i~ii~E 299 (309)
T PRK06195 220 AFKEEVVVFTGGLASMTRDEAMILVRRLGGTVGSSVTKKTTYLVTNTKDIEDLNREEMSNKLKKAIDLKKKGQNIKFLNE 299 (309)
T ss_pred cccCCEEEEccccCCCCHHHHHHHHHHhCCEecCCcccCceEEEECCCcchhhcccCcChHHHHHHHHHhCCCCcEEecH
Confidence 467789999998765558899999999999999998 78999999852 235688888776 9999998
Q ss_pred HHHHHHH
Q 009150 461 NWLKESF 467 (542)
Q Consensus 461 sWL~dSl 467 (542)
+=+.+-+
T Consensus 300 ~~f~~l~ 306 (309)
T PRK06195 300 EEFLQKC 306 (309)
T ss_pred HHHHHHH
Confidence 7555544
No 85
>KOG0966 consensus ATP-dependent DNA ligase IV [Replication, recombination and repair]
Probab=95.82 E-value=0.022 Score=65.66 Aligned_cols=76 Identities=20% Similarity=0.335 Sum_probs=60.9
Q ss_pred EEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEE--CCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcCCCCCCCCc
Q 009150 402 MLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVT--GKVRKTLNFLTALCSGAWIVSPNWLKESFREGRFVDESSY 478 (542)
Q Consensus 402 lfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt--~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~Gk~LdEe~Y 478 (542)
+|+|...+..+..++++|...||.++.++ +..||.|+ +.. .|..--.|+++++-||.|+||.+|.+..++++-.++
T Consensus 641 Vlsgt~~~~tk~~le~~ivenGG~iv~nv~p~~~~ci~~a~~e-t~~vk~~~~~~~cdVl~p~Wlldcc~~~~l~p~~P~ 719 (881)
T KOG0966|consen 641 VLSGTSETHTKAKLEEIIVENGGKIVQNVGPSDTLCIATAGKE-TTRVKAQAIKRSCDVLKPAWLLDCCKKQRLLPWLPR 719 (881)
T ss_pred EecCCcccccHHHHHHHHHHcCCEEEEcCCCCCcceEEecccc-chHHHHHHHhccCceeeHHHHHHHHhhhhccccccH
Confidence 35777766656789999999999999887 66999885 443 345556778889999999999999999998776653
No 86
>PRK06063 DNA polymerase III subunit epsilon; Provisional
Probab=95.62 E-value=0.037 Score=58.04 Aligned_cols=70 Identities=16% Similarity=0.064 Sum_probs=59.7
Q ss_pred CCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCC-CCcHHHHHHHhcCCeEeCHHHHHHHH
Q 009150 397 KCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKV-RKTLNFLTALCSGAWIVSPNWLKESF 467 (542)
Q Consensus 397 k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~-~RTlKfL~AIA~G~wIVSpsWL~dSl 467 (542)
.+-+|+|||-... .|.++++.++.+||.|.+.+ .+++.||++.. ..+-|.-.|-..|++|++.+=+.+-+
T Consensus 234 ~g~~~v~TG~l~~-~R~e~~~~~~~~G~~v~~sVs~~t~~lv~g~~~~~ssK~~kA~~~gi~ii~e~~f~~ll 305 (313)
T PRK06063 234 QGMRVALSAEVSR-THEELVERILHAGLAYSDSVDRDTSLVVCNDPAPEQGKGYHARQLGVPVLDEAAFLELL 305 (313)
T ss_pred CCCEEEEecCCCC-CHHHHHHHHHHcCCEecCccccCccEEEECCCCCcccHHHHHHHcCCccccHHHHHHHH
Confidence 4679999997764 57899999999999999998 88999999863 43579999999999999998777655
No 87
>PRK14351 ligA NAD-dependent DNA ligase LigA; Provisional
Probab=95.44 E-value=0.055 Score=62.50 Aligned_cols=75 Identities=12% Similarity=0.098 Sum_probs=64.3
Q ss_pred CCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHc
Q 009150 395 NGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFRE 469 (542)
Q Consensus 395 ~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~ 469 (542)
+..+..|+|||....-.|.+++++|+.+||+|.+++ .+|++||++...-.-|+-.|-..|++|++.+-+.+-++.
T Consensus 609 ~l~g~~~v~TG~l~~~~R~~~~~~i~~~Gg~v~~sVs~kt~~Lv~G~~~g~sKl~kA~~lgi~ii~E~~f~~ll~~ 684 (689)
T PRK14351 609 ALDGLTFVFTGSLSGYTRSEAQELVEAHGGNATGSVSGNTDYLVVGENPGQSKRDDAEANDVPTLDEEEFEELLAE 684 (689)
T ss_pred CCCCcEEEEccCCCCCCHHHHHHHHHHcCCEEcCCcCCCccEEEEcCCCChhHHHHHHHCCCeEecHHHHHHHHHh
Confidence 466799999998866558899999999999999998 789999999754346999999999999999988876664
No 88
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=95.43 E-value=0.015 Score=63.59 Aligned_cols=50 Identities=22% Similarity=0.345 Sum_probs=46.8
Q ss_pred ccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccc
Q 009150 168 SSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADT 217 (542)
Q Consensus 168 ~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~ 217 (542)
...+|.+|+|+.||.+++.-+++.|..+|...+.-++..||+|.||+..+
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgiG~ReYy~k~GY~~~g 508 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREEGAKKILVISGIGVREYYRKLGYELDG 508 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhhccccEEEEecccHHHHHHHhCccccC
Confidence 46799999999999999999999999999999999999999999998765
No 89
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=95.38 E-value=0.059 Score=55.51 Aligned_cols=75 Identities=15% Similarity=0.097 Sum_probs=58.1
Q ss_pred CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccccc
Q 009150 141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTA 218 (542)
Q Consensus 141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~ 218 (542)
+|+||+++.....+.+ .+||. .+..++|||||+++.+...+.....+.|+.=.+...+..|...=+|+||+-..+
T Consensus 173 ~~~iVs~~~s~~~~~~--~~EI~-I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~WDc~N~~S~~lA~kLGf~~~~~ 247 (265)
T PF12746_consen 173 DGEIVSGCSSYFVYEN--GIEID-IETHPEYRGKGLATAVAAAFILECLENGLYPSWDCHNLASIALAEKLGFHFDFE 247 (265)
T ss_dssp TTEEEEEEEEEEEETT--EEEEE-EEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE-EESSHHHHHHHHHCT--EEEE
T ss_pred CCEEEEEEEEEEEECC--EEEEE-EEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCeeCCCHHHHHHHHHcCCcccce
Confidence 5678876666666655 67764 566999999999999999999999999999998887778999999999987653
No 90
>PF00533 BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IPR001357 The BRCT domain (after the C_terminal domain of a breast cancer susceptibility protein) is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage [], for example as found in the breast cancer DNA-repair protein BRCA1. The domain is an approximately 100 amino acid tandem repeat, which appears to act as a phospho-protein binding domain []. A chitin biosynthesis protein from yeast also seems to belong to this group. ; GO: 0005622 intracellular; PDB: 3L46_A 3AL3_A 3AL2_A 1WF6_A 3II6_X 2NTE_B 3FA2_A 2R1Z_A 2COK_A 2K7F_A ....
Probab=95.36 E-value=0.026 Score=45.31 Aligned_cols=38 Identities=16% Similarity=0.384 Sum_probs=31.9
Q ss_pred CCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150 504 PGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY 541 (542)
Q Consensus 504 ~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L 541 (542)
+.++|+|+.|||.......++.|+++|+..||++...+
T Consensus 2 ~~~~F~g~~f~i~~~~~~~~~~l~~~i~~~GG~v~~~~ 39 (78)
T PF00533_consen 2 KPKIFEGCTFCISGFDSDEREELEQLIKKHGGTVSNSF 39 (78)
T ss_dssp STTTTTTEEEEESSTSSSHHHHHHHHHHHTTEEEESSS
T ss_pred CCCCCCCEEEEEccCCCCCHHHHHHHHHHcCCEEEeec
Confidence 46799999999966666678999999999999996543
No 91
>PRK07956 ligA NAD-dependent DNA ligase LigA; Validated
Probab=95.16 E-value=0.074 Score=61.25 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=63.5
Q ss_pred CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHcC
Q 009150 396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFREG 470 (542)
Q Consensus 396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~G 470 (542)
..+.+|+|||....-.|++++++++.+||.|.+++ ..|+.||++... +-|+-.|-..|++|++.+-+.+.++++
T Consensus 591 ~~g~~~v~TG~l~~~~R~e~~~~i~~~G~~v~~sVs~kt~~lv~G~~~-gsK~~kA~~lgI~ii~E~~f~~~l~~~ 665 (665)
T PRK07956 591 LAGKTVVLTGTLEQLSRDEAKEKLEALGAKVSGSVSKKTDLVVAGEAA-GSKLAKAQELGIEVLDEEEFLRLLGEG 665 (665)
T ss_pred ccccEEEEeCCCCCCCHHHHHHHHHHcCCEEeCcccCCCCEEEECCCC-ChHHHHHHHcCCeEEcHHHHHHHHhcC
Confidence 56799999998866458899999999999999998 789999999743 479999999999999999888876543
No 92
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=94.74 E-value=0.036 Score=49.13 Aligned_cols=72 Identities=22% Similarity=0.152 Sum_probs=45.6
Q ss_pred cEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCC-----cEEEEEccccchhhhhhcCcc
Q 009150 143 VVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGI-----RTIFCWGDKESEGFWHKQDTS 214 (542)
Q Consensus 143 ~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI-----~~I~l~a~~~A~~Fw~KqGF~ 214 (542)
...||+.....+++...+++.-|||+++.||+|+|..|++.+.+.-.++=. ..+.-|=+..|.|+|.+.|+.
T Consensus 18 ~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~~~L~Wrsr~~n~~n~Wyf~rs~Gs~~~~~~~ 94 (99)
T cd04264 18 GYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRDFPKLFWRSRKTNPINPWYFKRSDGSFKNGQWK 94 (99)
T ss_pred CceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhCCceEEEeCCCCcccceEEEeeEEEEEcCCeE
Confidence 344444332222235799999999999999999999999998877433211 111222223467777776654
No 93
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=94.69 E-value=0.2 Score=49.00 Aligned_cols=91 Identities=20% Similarity=0.243 Sum_probs=65.3
Q ss_pred cccceeEEEeeecccCCCCcEEEEEEeeecc-----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 009150 124 LNGKYCTLLLKSSFMDDDDVVVAAITYQIVP-----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC 198 (542)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~-----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l 198 (542)
|+..|.=.+.... +.++||+...+..+. +|.-+.+|+++-++|+|||+|+++.+-.-+.+.++..+-+-+.
T Consensus 41 f~~~Y~l~~~~~K---gT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~~~N~~~- 116 (181)
T PF06852_consen 41 FDDDYWLVLTCLK---GTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSVDDNSVA- 116 (181)
T ss_pred hccCeEEEEEEEc---CCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccCCCceee-
Confidence 5554533333322 567899988887665 3567999999999999999999976666667778776666555
Q ss_pred Eccccchhhhhh-cCcccccc
Q 009150 199 WGDKESEGFWHK-QDTSADTA 218 (542)
Q Consensus 199 ~a~~~A~~Fw~K-qGF~~~~~ 218 (542)
.++..+..||+| .||...+.
T Consensus 117 ~~~~~~~~~w~k~~G~~~~~h 137 (181)
T PF06852_consen 117 QGNVKMSNFWHKMFGFDDYGH 137 (181)
T ss_pred ecCHHHHHHHHHHhCCCCCcc
Confidence 455566677776 58777665
No 94
>TIGR00575 dnlj DNA ligase, NAD-dependent. The member of this family from Treponema pallidum differs in having three rather than just one copy of the BRCT (BRCA1 C Terminus) domain (pfam00533) at the C-terminus. It is included in the seed.
Probab=94.69 E-value=0.073 Score=61.16 Aligned_cols=66 Identities=18% Similarity=0.186 Sum_probs=56.2
Q ss_pred CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHH
Q 009150 396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNW 462 (542)
Q Consensus 396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsW 462 (542)
..+-.|+|||......|.+++++++.+||+|.+++ .++++||++...- -|+-.|...|++|++.+.
T Consensus 585 l~gk~~v~TG~l~~~~R~~~~~~i~~~G~~v~~sVs~kt~~lv~G~~~g-sKl~kA~~lgi~ii~E~~ 651 (652)
T TIGR00575 585 LAGKTFVLTGTLSQMSRDEAKELLENLGGKVASSVSKKTDYVIAGEKAG-SKLAKAQELGIPIINEEE 651 (652)
T ss_pred ccCcEEEEeccCCCCCHHHHHHHHHHcCCEEeCCcCCCccEEEECCCCC-hHHHHHHHcCCcEechhh
Confidence 45679999998765558899999999999999998 7899999997443 499999999999998764
No 95
>PRK14350 ligA NAD-dependent DNA ligase LigA; Provisional
Probab=94.58 E-value=0.11 Score=59.88 Aligned_cols=71 Identities=13% Similarity=0.011 Sum_probs=60.1
Q ss_pred CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHH
Q 009150 396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESF 467 (542)
Q Consensus 396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSl 467 (542)
..+-.|+|||......|.+++++|+++||+|.+++ .+|++||++... .-|+--|-..|++|++.+.+.+-+
T Consensus 594 l~gktfV~TG~l~~~~R~e~~~lie~~Ggkv~ssVSkktd~LV~G~~a-GsKl~KA~~LGI~Ii~e~~f~~~l 665 (669)
T PRK14350 594 LFGKKFCITGSFNGYSRSVLIDKLTKKGAIFNTCVTKYLDFLLVGEKA-GLKLKKANNLGIKIMSLFDIKSYV 665 (669)
T ss_pred cCCcEEEEecccCCCCHHHHHHHHHHcCCEEeccccCCCcEEEECCCC-CchHHHHHHcCCEEecHHHHHHHh
Confidence 55779999997655458899999999999999998 789999999643 358999999999999999887743
No 96
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=94.53 E-value=0.035 Score=53.16 Aligned_cols=68 Identities=13% Similarity=0.103 Sum_probs=55.9
Q ss_pred eEeeeeeeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEccccchhhhhhcCccccccc---cccccCCC
Q 009150 160 AEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG-IRTIFCWGDKESEGFWHKQDTSADTAV---SLKFCFPV 227 (542)
Q Consensus 160 aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~G-I~~I~l~a~~~A~~Fw~KqGF~~~~~~---~~~~~~~~ 227 (542)
+-|..++|.|+||.||+|+.|+.+-++.|.+.- .++++|.+-.-=+.||++.||..++.. ..+..|.+
T Consensus 102 i~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvPFYEr~gFk~vgp~~~~~~~k~F~e 173 (190)
T KOG4144|consen 102 IHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVPFYERFGFKAVGPCAITVGSKTFME 173 (190)
T ss_pred eeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccchhHhcCceeecccccccccchhHH
Confidence 559999999999999999999988777777665 467788888888999999999999874 44444544
No 97
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=94.25 E-value=0.14 Score=58.52 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=62.3
Q ss_pred CCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHH
Q 009150 394 SNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKES 466 (542)
Q Consensus 394 s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dS 466 (542)
++-.+-.|+|||..+.-.|.+++..|++|||+|..++ .+++.||++..--+ |+--|...|+.|++.+++.+-
T Consensus 593 ~~l~gkt~V~TGtL~~~sR~eak~~le~lGakv~~SVSkktD~vvaG~~aGS-Kl~kA~eLgv~i~~E~~~~~l 665 (667)
T COG0272 593 SPLAGKTFVLTGTLEGMSRDEAKALLEALGAKVSGSVSKKTDYVVAGENAGS-KLAKAQELGVKIIDEEEFLAL 665 (667)
T ss_pred cccCCCEEEEeccCCCCCHHHHHHHHHHcCCEEeceecccccEEEEcCCCCh-HHHHHHHcCCeEecHHHHHHh
Confidence 5567789999998876668899999999999999998 78888999975544 999999999999999998764
No 98
>smart00292 BRCT breast cancer carboxy-terminal domain.
Probab=94.08 E-value=0.1 Score=40.81 Aligned_cols=36 Identities=19% Similarity=0.402 Sum_probs=30.9
Q ss_pred CCCCCeEEEEeC-CCCCCHHHHHHHHHhCCCEEeccC
Q 009150 506 GLLRGYNIIMAA-HIQPPIKTLSAIVRSAGGNVSSKY 541 (542)
Q Consensus 506 ~LF~G~~f~Is~-~v~p~~~~L~~LIeagGG~V~~~L 541 (542)
++|+|+.||+.+ .....++.++++|+.+||+++..+
T Consensus 1 ~~f~g~~~~~~g~~~~~~~~~l~~~i~~~Gg~~~~~~ 37 (80)
T smart00292 1 KLFKGKVFVITGKFDKNERDELKELIEALGGKVTSSL 37 (80)
T ss_pred CccCCeEEEEeCCCCCccHHHHHHHHHHcCCEEeccc
Confidence 479999999997 455678999999999999998754
No 99
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=93.91 E-value=0.072 Score=46.54 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=50.6
Q ss_pred CceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcc--ccchhhhhhcCcccc
Q 009150 157 TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGD--KESEGFWHKQDTSAD 216 (542)
Q Consensus 157 ~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~--~~A~~Fw~KqGF~~~ 216 (542)
++++|+....--|+|||||+.+.++-.+.++|.++|+.--.=+.+ ..+...-++.||...
T Consensus 17 dqtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P~Y~hv~~~N~~~~r~~~~lg~~~~ 78 (89)
T PF08444_consen 17 DQTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFPFYGHVDEDNEASQRLSKSLGFIFM 78 (89)
T ss_pred cccccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCCeEeehHhccHHHHHHHHHCCCeec
Confidence 379999999999999999999999999999999999986533332 248888999999764
No 100
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=93.83 E-value=0.15 Score=47.11 Aligned_cols=84 Identities=12% Similarity=0.104 Sum_probs=60.1
Q ss_pred CCcEEEEEEeeecc---CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-cchhhhhhcCcccc
Q 009150 141 DDVVVAAITYQIVP---ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-ESEGFWHKQDTSAD 216 (542)
Q Consensus 141 ~~~VIg~i~~~i~~---~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-~A~~Fw~KqGF~~~ 216 (542)
+|.+||-+++.-.+ -.-.++ |..|.+-..||++|+|++..+.+....+ |+-.|+.+-.| -|..||+|--++..
T Consensus 45 ~~~~igf~l~L~~~~~~~~iD~~-~~efFIi~k~~~~GvGR~aaK~If~~~~--g~w~Va~i~EN~PA~~fwK~~~~t~~ 121 (143)
T COG5628 45 GGLPVGFALVLDLAHSPTPIDRA-VAEFFIVRKHRRRGVGRAAAKAIFGSAW--GVWQVATVRENTPARAFWKRVAETYP 121 (143)
T ss_pred CCceeeeeeeecccCCCCccccc-chheEeeehhhccchhHHHHHHHHHHhh--ceEEEEEeccCChhHHHHHhhhcccc
Confidence 56788877665544 122477 8899999999999999999999988765 56777666665 49999999766543
Q ss_pred c--cccccccCCC
Q 009150 217 T--AVSLKFCFPV 227 (542)
Q Consensus 217 ~--~~~~~~~~~~ 227 (542)
- +.++-.-+|+
T Consensus 122 i~~E~r~d~~~d~ 134 (143)
T COG5628 122 VVEEDRQDARWDG 134 (143)
T ss_pred cchhhhhcccCCC
Confidence 3 2244444555
No 101
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=93.65 E-value=0.2 Score=46.97 Aligned_cols=62 Identities=21% Similarity=0.224 Sum_probs=56.1
Q ss_pred ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc-----cchhhhhhcCccccccc
Q 009150 158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK-----ESEGFWHKQDTSADTAV 219 (542)
Q Consensus 158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~-----~A~~Fw~KqGF~~~~~~ 219 (542)
.|.||.-..|....||+|+|++|+..+..+++..|...+-|-.+- .|..|---.||.++++.
T Consensus 83 ~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaalGF~eVG~a 149 (167)
T COG3818 83 NFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAALGFHEVGQA 149 (167)
T ss_pred ceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhcCceEccce
Confidence 499999999999999999999999999999999999999776554 38899999999999865
No 102
>KOG2481 consensus Protein required for normal rRNA processing [RNA processing and modification]
Probab=93.55 E-value=0.086 Score=58.35 Aligned_cols=77 Identities=19% Similarity=0.349 Sum_probs=59.0
Q ss_pred CeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-----------CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHH
Q 009150 398 CFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-----------STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKES 466 (542)
Q Consensus 398 ~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-----------~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dS 466 (542)
++.+.++--.+ ++.|.-+|+.+||.|.-+. +.+||=|+..+.-+.+ ..|---|.|+||.||
T Consensus 330 glkFfl~reVP---resL~fiI~s~GG~V~wd~~~~g~~~~~~d~~ITH~IvDrP~~~~~-----v~gR~YvQPQWvfDs 401 (570)
T KOG2481|consen 330 GLKFFLNREVP---RESLEFIIRSFGGKVSWDPLGIGATYDESDERITHQIVDRPGQQTS-----VIGRTYVQPQWVFDS 401 (570)
T ss_pred cceeeeeccCc---hHHHHHHHHHcCCceecCccCCCCcccccccceeeeeecccCccce-----eeeeeeecchhhhhh
Confidence 45666654444 4578999999999998662 4579999998765444 346677999999999
Q ss_pred HHcCCCCCCCCcccCC
Q 009150 467 FREGRFVDESSYMLND 482 (542)
Q Consensus 467 lk~Gk~LdEe~YeL~d 482 (542)
+.++.+++.+.|....
T Consensus 402 vNar~llpt~~Y~~G~ 417 (570)
T KOG2481|consen 402 VNARLLLPTEKYFPGK 417 (570)
T ss_pred ccchhhccHhhhCCCc
Confidence 9999999998887554
No 103
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=93.01 E-value=0.19 Score=48.06 Aligned_cols=61 Identities=13% Similarity=-0.055 Sum_probs=50.9
Q ss_pred ceeEeeeeeeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEccc---cchhhhhhcCcccccc
Q 009150 158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS-VGIRTIFCWGDK---ESEGFWHKQDTSADTA 218 (542)
Q Consensus 158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~KqGF~~~~~ 218 (542)
-.+|+.-+--.|..||+|||+..|...+.++.+ +++.+....... -+..||+|.+|+....
T Consensus 106 ~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~ 170 (185)
T KOG4135|consen 106 ITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFY 170 (185)
T ss_pred eeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheeeee
Confidence 467777777789999999999999999999987 488888777633 4999999999987654
No 104
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=92.77 E-value=0.049 Score=62.08 Aligned_cols=88 Identities=25% Similarity=0.348 Sum_probs=69.5
Q ss_pred CCCeEEEEcccCChhh---HHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcC-CeEeCHHHHHHHHHcC
Q 009150 396 GKCFRIMLMNIADDSK---KVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSG-AWIVSPNWLKESFREG 470 (542)
Q Consensus 396 ~k~~rVlfSG~~de~k---k~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G-~wIVSpsWL~dSlk~G 470 (542)
.+...++|||..+..- +...-.+...+|..+..++ ..+||+|+-++ +|.|...|...+ ++||.+.||..|++.-
T Consensus 442 ~~~~~~vfSg~~P~~~~~~~s~~~~~~~~~g~vs~~~~~~~~th~i~~~~-gt~k~~~a~~~~~~~Vv~~~wl~~~~e~w 520 (635)
T KOG0323|consen 442 LKGSQIVFSGLHPTGSTDESADILGVAQQLGAVSAPDVSDKTTHLIAANA-GTKKVYKAVVSGSAKVVNAAWLWRSLEKW 520 (635)
T ss_pred hhccceeecccccCcCCcchhhhhhhhhcccceecccccchhhhHHhhcc-CcceeeccccccceeEechhHHHHHHHHh
Confidence 3467889999775431 2334456677888777776 88999999885 588988888877 9999999999999999
Q ss_pred CCCCCCCcccCCch
Q 009150 471 RFVDESSYMLNDDD 484 (542)
Q Consensus 471 k~LdEe~YeL~d~~ 484 (542)
..++|..|-+.+..
T Consensus 521 ~~v~ek~~~l~~~~ 534 (635)
T KOG0323|consen 521 GKVEEKLEPLDDDQ 534 (635)
T ss_pred cchhcccccccccc
Confidence 99999988876653
No 105
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=92.73 E-value=0.12 Score=55.20 Aligned_cols=92 Identities=22% Similarity=0.298 Sum_probs=63.9
Q ss_pred cccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeE-------e-----eeeee--c----cCccccChHHHHHHHHH
Q 009150 124 LNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAE-------V-----PLAAV--S----SIYQHKGVGRLLYLELR 185 (542)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~ae-------I-----~~~AV--~----~~~QgkGiG~~Lv~~l~ 185 (542)
-|+-+||.+-+... +.+.+||..-++-.-.+.-+-| + +--+| + ..||.||+|+.||++++
T Consensus 436 ANgGWETFlSYEDp--kqDILiGLLRLRkcs~~~~~~el~g~~SivRELHVYGs~vpv~~rDp~KfQHQG~GtLLmeEAE 513 (554)
T KOG2535|consen 436 ANGGWETFLSYEDP--KQDILIGLLRLRKCSKKTTRPELFGSQSIVRELHVYGSVVPVHSRDPTKFQHQGFGTLLMEEAE 513 (554)
T ss_pred ccCChheeecccCc--chhHHHHHHHHhhcccccccchhcCccchheeeeecceeeecccCCchhhhhcchhhHHHHHHH
Confidence 36677777666543 4667777654443322211111 1 11222 2 36999999999999999
Q ss_pred HHHHH-cCCcEEEEEccccchhhhhhcCccccc
Q 009150 186 KRLQS-VGIRTIFCWGDKESEGFWHKQDTSADT 217 (542)
Q Consensus 186 ~~lk~-~GI~~I~l~a~~~A~~Fw~KqGF~~~~ 217 (542)
.-+++ .|-.+|...+.-+...||.|.||+..+
T Consensus 514 RIAr~EHgS~KiavISGVGtR~YY~klGY~LdG 546 (554)
T KOG2535|consen 514 RIAREEHGSGKIAVISGVGTRNYYRKLGYELDG 546 (554)
T ss_pred HHHHHhcCCCceEEEeccchHHHHHhhCeeecC
Confidence 99986 588999999988999999999998754
No 106
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=92.65 E-value=0.12 Score=45.92 Aligned_cols=57 Identities=25% Similarity=0.258 Sum_probs=39.2
Q ss_pred ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCC-----cEEEEEccccchhhhhhcCcc
Q 009150 158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGI-----RTIFCWGDKESEGFWHKQDTS 214 (542)
Q Consensus 158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI-----~~I~l~a~~~A~~Fw~KqGF~ 214 (542)
...+|.-|||+++.||+|+|..|++.+++...++=. ..+.-|=+..|.|+|++.|+.
T Consensus 33 ~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~~~L~Wrsr~~n~~n~Wyf~~s~Gs~~~~~~~ 94 (99)
T cd04265 33 GVPYLDKFAVSSSAQGEGTGEALWRRLRRDFPKLFWRSRSTNPINPWYFKRCDGSFKNGHWT 94 (99)
T ss_pred CceEEEEEEEchhhhhcChHHHHHHHHHhhCCceEEEeCCCCcccceEEEeeEEEEEcCCeE
Confidence 588999999999999999999999998877432211 001112222367777776654
No 107
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=91.99 E-value=0.48 Score=45.61 Aligned_cols=57 Identities=18% Similarity=0.216 Sum_probs=46.8
Q ss_pred CCCcEEEEEEeeecc-----CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEE
Q 009150 140 DDDVVVAAITYQIVP-----ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTI 196 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~-----~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I 196 (542)
..+++||-|++...- ...+.+||-|+||+...|.++++.-|++|+..++...||-..
T Consensus 86 ~~~kLvgfIsaip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~qA 147 (162)
T PF01233_consen 86 SSKKLVGFISAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQA 147 (162)
T ss_dssp TTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EE
T ss_pred CCCEEEEEEccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCceee
Confidence 467899999887664 223789999999999999999999999999999999998664
No 108
>COG5163 NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]
Probab=91.81 E-value=0.17 Score=54.69 Aligned_cols=77 Identities=19% Similarity=0.359 Sum_probs=58.6
Q ss_pred CeEEEEcccCChhhHHHHHHHHHHcCcEEeccC------------CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHH
Q 009150 398 CFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG------------STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKE 465 (542)
Q Consensus 398 ~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~------------~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~d 465 (542)
++.+.+|.-.+- ..|.-+|...||.|..+. ..+||-|+..+.-.-| ..|..-+.|+||.+
T Consensus 353 ~f~FyisreVp~---dsLefiilscGG~V~~~p~~~~i~~~~~vD~~vth~i~drp~~~~k-----vegrtYiQPQw~fD 424 (591)
T COG5163 353 GFKFYISREVPG---DSLEFIILSCGGSVVGSPCEADIHVSEKVDEKVTHQIVDRPVMKNK-----VEGRTYIQPQWLFD 424 (591)
T ss_pred ceEEEEeccccc---hHHHHHHHHcCCcccCchhhccCCchhhccchhhhhhccchhhhhh-----hcceeeechHHHHh
Confidence 455666554443 358889999999988652 4588988887653333 57888899999999
Q ss_pred HHHcCCCCCCCCcccCC
Q 009150 466 SFREGRFVDESSYMLND 482 (542)
Q Consensus 466 Slk~Gk~LdEe~YeL~d 482 (542)
|+.+|.+...+.|....
T Consensus 425 siNkG~l~~~~~Y~~G~ 441 (591)
T COG5163 425 SINKGKLACVENYCVGK 441 (591)
T ss_pred hhccccchhhhhccccc
Confidence 99999999988887654
No 109
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=91.03 E-value=1.1 Score=45.39 Aligned_cols=60 Identities=22% Similarity=0.233 Sum_probs=52.0
Q ss_pred CceeEeeeeeeccCcccc--------C--------------------hHHHHHHHHHHHHHHcCCcEEEEEccccchhhh
Q 009150 157 TQYAEVPLAAVSSIYQHK--------G--------------------VGRLLYLELRKRLQSVGIRTIFCWGDKESEGFW 208 (542)
Q Consensus 157 ~~~aeI~~~AV~~~~Qgk--------G--------------------iG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw 208 (542)
....||--|||+++++++ | +...|+..+.+++...||++++.++...-...+
T Consensus 109 ~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~l~r~l 188 (241)
T TIGR03694 109 SRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSSANGITHWYAIMEPRLARLL 188 (241)
T ss_pred CceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHHHHCCCcEEEEEeCHHHHHHH
Confidence 368999999999999874 3 446799999999999999999999998877788
Q ss_pred hhcCcccc
Q 009150 209 HKQDTSAD 216 (542)
Q Consensus 209 ~KqGF~~~ 216 (542)
.+.||...
T Consensus 189 ~r~G~~~~ 196 (241)
T TIGR03694 189 SRFGIQFR 196 (241)
T ss_pred HHhCCceE
Confidence 99998764
No 110
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=89.97 E-value=1.2 Score=38.89 Aligned_cols=57 Identities=19% Similarity=0.023 Sum_probs=47.1
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEE
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCW 199 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~ 199 (542)
.+|++||+...... .+ ..+.....+++++...+.|..|+-++.+.+.+.|++.+=+-
T Consensus 78 ~~g~~va~~~~~~~-~~--~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g 134 (142)
T PF13480_consen 78 DGGEPVAFALGFRH-GG--TLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFG 134 (142)
T ss_pred ECCEEEEEEEEEEE-CC--EEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEEC
Confidence 36899998855443 34 66688999999999999999999999999999999887443
No 111
>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.
Probab=88.80 E-value=0.73 Score=34.97 Aligned_cols=32 Identities=19% Similarity=0.466 Sum_probs=27.5
Q ss_pred CeEEEEeCCC-CCCHHHHHHHHHhCCCEEeccC
Q 009150 510 GYNIIMAAHI-QPPIKTLSAIVRSAGGNVSSKY 541 (542)
Q Consensus 510 G~~f~Is~~v-~p~~~~L~~LIeagGG~V~~~L 541 (542)
|+.||+++.. ...+..|+++|+..||++...+
T Consensus 1 ~~~~~i~g~~~~~~~~~l~~~i~~~Gg~v~~~~ 33 (72)
T cd00027 1 GLTFVITGDLPSEERDELKELIEKLGGKVTSSV 33 (72)
T ss_pred CCEEEEEecCCCcCHHHHHHHHHHcCCEEeccc
Confidence 5789998877 6779999999999999998754
No 112
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=87.72 E-value=4.2 Score=40.38 Aligned_cols=62 Identities=11% Similarity=0.067 Sum_probs=51.2
Q ss_pred CCceeEeeeeeeccCcccc---C----hHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCccccc
Q 009150 156 DTQYAEVPLAAVSSIYQHK---G----VGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADT 217 (542)
Q Consensus 156 d~~~aeI~~~AV~~~~Qgk---G----iG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~ 217 (542)
..+..||--|||+++++.. + +...|+..+.+++...||++++.++...=+..+++.||....
T Consensus 96 ~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~~~r~l~r~G~~~~~ 164 (207)
T PRK13834 96 HPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGYTEIVTATDLRFERILARAGWPMQR 164 (207)
T ss_pred CCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHcCCCeEE
Confidence 3479999999999985322 2 557899999999999999999999987666778999988743
No 113
>COG5275 BRCT domain type II [General function prediction only]
Probab=87.66 E-value=2.2 Score=43.16 Aligned_cols=72 Identities=13% Similarity=0.028 Sum_probs=56.0
Q ss_pred CCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHH
Q 009150 394 SNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKE 465 (542)
Q Consensus 394 s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~d 465 (542)
....+..|+|||....-.|...+.+++.+||.|+..+ ..+|.||.+.-.---|+-.+-..+++.+..+=++.
T Consensus 155 ~cL~G~~fVfTG~l~TlsR~~a~~lvk~yGgrvT~~pSskTtflvlGdnaGP~K~ekiKqlkIkaidEegf~~ 227 (276)
T COG5275 155 ECLKGKVFVFTGDLKTLSRDDAKTLVKVYGGRVTAVPSSKTTFLVLGDNAGPSKMEKIKQLKIKAIDEEGFDS 227 (276)
T ss_pred ccccccEEEEecccccccchhHHHHHHHhCCeeecccccceeEEEecCCCChHHHHHHHHhCCccccHHHHHH
Confidence 3456789999999987778889999999999999988 78899999874434566666667887776665544
No 114
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=85.02 E-value=0.67 Score=53.49 Aligned_cols=31 Identities=26% Similarity=0.256 Sum_probs=28.2
Q ss_pred eEeeeeeeccCccccChHHHHHHHHHHHHHH
Q 009150 160 AEVPLAAVSSIYQHKGVGRLLYLELRKRLQS 190 (542)
Q Consensus 160 aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~ 190 (542)
|.|.-.||+|+||+.|+|++-++-+.++..-
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG 645 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYFEG 645 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHHHHHHHhc
Confidence 5689999999999999999999999998764
No 115
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=84.06 E-value=3 Score=38.73 Aligned_cols=56 Identities=16% Similarity=0.231 Sum_probs=47.6
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC 198 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l 198 (542)
.+|++||+...-+.+.+ ..-|++|. ||++....+|+..+-.-++.+++.|++++.+
T Consensus 46 ~~~kLiav~v~D~l~~g--lSaVY~fy-DPd~~~~SlG~~~iL~eI~~a~~~~l~y~YL 101 (128)
T PF04377_consen 46 LDGKLIAVAVVDILPDG--LSAVYTFY-DPDYSKRSLGTYSILREIELARELGLPYYYL 101 (128)
T ss_pred eCCeEEEEEEeecccch--hhheeeee-CCCccccCcHHHHHHHHHHHHHHcCCCEEee
Confidence 57899999887777755 44466655 9999999999999999999999999999865
No 116
>KOG3524 consensus Predicted guanine nucleotide exchange factor (PEBBLE) [Signal transduction mechanisms]
Probab=79.77 E-value=1.2 Score=51.40 Aligned_cols=93 Identities=18% Similarity=0.244 Sum_probs=76.3
Q ss_pred ccccCCCCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHHHHc
Q 009150 390 KEFQSNGKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKESFRE 469 (542)
Q Consensus 390 ~~~~s~~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dSlk~ 469 (542)
...-.+-.+..+.|=||.+++ ...+...++.-||....+...|||||.+.-. +.-.-.+......+|..+|.--++..
T Consensus 205 ~hrl~~feg~~~~f~gF~~ee-~~~m~~sle~~gg~~a~~d~~cthvvv~e~~-~~~~p~~~s~~~~~vk~ewfw~siq~ 282 (850)
T KOG3524|consen 205 KHRLGVFEGLSLFFHGFKQEE-IDDMLRSLENTGGKLAPSDTLCTHVVVNEDN-DEVEPLAVSSNQVHVKKEWFWVSIQR 282 (850)
T ss_pred hhccccccCCeEeecCCcHHH-HHHHHHHHHhcCCcccCCCCCceeEeecCCc-cccccccccccceeecccceEEEEec
Confidence 334445567899999999877 5778888999999998877999999999744 34445567788999999999999999
Q ss_pred CCCCCCCCcccCCch
Q 009150 470 GRFVDESSYMLNDDD 484 (542)
Q Consensus 470 Gk~LdEe~YeL~d~~ 484 (542)
|.|..|..|.+.+..
T Consensus 283 g~~a~e~~yl~~~~~ 297 (850)
T KOG3524|consen 283 GCCAIEDNYLLPTGK 297 (850)
T ss_pred chhccccceeccccc
Confidence 999999999988763
No 117
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=77.25 E-value=3.5 Score=36.70 Aligned_cols=59 Identities=20% Similarity=0.120 Sum_probs=40.1
Q ss_pred CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCc-----EEEEEccccchhhhhhcCcc
Q 009150 156 DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIR-----TIFCWGDKESEGFWHKQDTS 214 (542)
Q Consensus 156 d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~-----~I~l~a~~~A~~Fw~KqGF~ 214 (542)
+.+++++.-|||++..++.|++..+-+.+++...++=.+ .+.-|=+..|.|+|.++|+.
T Consensus 30 ~~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d~~~L~Wrsr~~n~~n~Wyf~rs~Gs~~~~~~~ 93 (98)
T cd03173 30 GNSIPYLDKFAVSDHLWLNNVTDNIFNLIRKDFPSLLWRVRENDANLKWYFSKSVGSLDKNGFI 93 (98)
T ss_pred CCCCEEEEEEEEcccccccCHHHHHHHHHHhhCCeeEEEeCCCCCccceEEEeeEEEEEcCCeE
Confidence 346999999999999999999999999887763221100 01112222377888877764
No 118
>KOG0966 consensus ATP-dependent DNA ligase IV [Replication, recombination and repair]
Probab=76.26 E-value=2 Score=50.22 Aligned_cols=74 Identities=18% Similarity=0.311 Sum_probs=50.1
Q ss_pred cccCChhhHHHHHHHHHHcCcEEeccC-------CceeEEEECC---CCCcHHHHHHHhc--CCeEeCHHHHHHHHHcCC
Q 009150 404 MNIADDSKKVHLTKVIEDLGGAVTSDG-------STSTHVVTGK---VRKTLNFLTALCS--GAWIVSPNWLKESFREGR 471 (542)
Q Consensus 404 SG~~de~kk~~L~kiIkkLGG~V~~d~-------~~~THLIt~k---~~RTlKfL~AIA~--G~wIVSpsWL~dSlk~Gk 471 (542)
++..+.++ ..+.-.++.+||.+++.. -..||+|+.- .-+..+...+... ...||.|+|+++|...+.
T Consensus 795 ~~~~~se~-~~~~l~~k~~g~~i~~~~~~~~~~~~~~t~~v~~~i~~~h~~~~~~~~~~lt~~rkv~~~~wv~~s~~~~~ 873 (881)
T KOG0966|consen 795 RRKLSSEE-VIIELKLKNFGGRITDAQSECNNIGAKYTHCVLRCIDEDHEKIKEQKKASLTIKRKVVAPSWVDHSINENC 873 (881)
T ss_pred cccccHHH-HHHHHHHHHhcceeeeccchhhhcccceeeeeeeecchHHHHHHHHHHHHhcccccccCHHHHHHhhcccc
Confidence 44444432 345667888899998763 4579999862 2222333333221 128999999999999999
Q ss_pred CCCCCCc
Q 009150 472 FVDESSY 478 (542)
Q Consensus 472 ~LdEe~Y 478 (542)
.++|++|
T Consensus 874 ~~~e~~~ 880 (881)
T KOG0966|consen 874 LLPEEDF 880 (881)
T ss_pred cCccccC
Confidence 9999988
No 119
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=72.96 E-value=8.1 Score=37.66 Aligned_cols=78 Identities=21% Similarity=0.116 Sum_probs=60.0
Q ss_pred CCcEEEEEEeeec-------------------cCCCceeEeeeeeeccCccc------cChHHHHHHHHHHHHHHcCCcE
Q 009150 141 DDVVVAAITYQIV-------------------PADTQYAEVPLAAVSSIYQH------KGVGRLLYLELRKRLQSVGIRT 195 (542)
Q Consensus 141 ~~~VIg~i~~~i~-------------------~~d~~~aeI~~~AV~~~~Qg------kGiG~~Lv~~l~~~lk~~GI~~ 195 (542)
+|+|+|++=+..- |.....-|+--|||+++..+ .-+...|+..+.+++...||++
T Consensus 53 ~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~~ 132 (182)
T PF00765_consen 53 DGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIRH 132 (182)
T ss_dssp TTEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-SE
T ss_pred CCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCCE
Confidence 4899999855421 12257899999999998532 2467889999999999999999
Q ss_pred EEEEccccchhhhhhcCcccccc
Q 009150 196 IFCWGDKESEGFWHKQDTSADTA 218 (542)
Q Consensus 196 I~l~a~~~A~~Fw~KqGF~~~~~ 218 (542)
+..++...-+..+++.||...--
T Consensus 133 ~v~V~~~~~~r~l~r~G~~~~~l 155 (182)
T PF00765_consen 133 IVGVVDPAMERILRRAGWPVRRL 155 (182)
T ss_dssp EEEEEEHHHHHHHHHCT-EEEES
T ss_pred EEEEEChHHHHHHHHcCCceEEC
Confidence 99999998999999999987654
No 120
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=71.21 E-value=14 Score=37.82 Aligned_cols=56 Identities=14% Similarity=0.200 Sum_probs=46.8
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC 198 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l 198 (542)
.+|++||+...-+.+.+ .-=|++| -||++...++|+..+-.-++.++++|+.++.+
T Consensus 151 ~~g~LiaVav~D~l~d~--lSAVY~F-yDPd~~~~SLG~~~iL~qI~~ak~~gl~y~YL 206 (240)
T PRK01305 151 GDGKLVAVAVTDVLDDG--LSAVYTF-YDPDEEHRSLGTFAILWQIELAKRLGLPYVYL 206 (240)
T ss_pred eCCeEEEEEEEeccCCc--eeeEEEe-eCCCccccCCHHHHHHHHHHHHHHcCCCeEee
Confidence 47899999877777755 4445544 59999999999999999999999999999865
No 121
>COG5163 NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]
Probab=70.38 E-value=3.3 Score=45.21 Aligned_cols=34 Identities=24% Similarity=0.473 Sum_probs=29.7
Q ss_pred CCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEecc
Q 009150 505 GGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK 540 (542)
Q Consensus 505 ~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~ 540 (542)
..||.|+.|||+..+. .+.|+-||.+|||.|+..
T Consensus 348 ~slFS~f~FyisreVp--~dsLefiilscGG~V~~~ 381 (591)
T COG5163 348 KSLFSGFKFYISREVP--GDSLEFIILSCGGSVVGS 381 (591)
T ss_pred hhhhhceEEEEecccc--chHHHHHHHHcCCcccCc
Confidence 5699999999998763 689999999999999864
No 122
>PRK06063 DNA polymerase III subunit epsilon; Provisional
Probab=69.15 E-value=6.4 Score=41.43 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=33.0
Q ss_pred CCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150 505 GGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY 541 (542)
Q Consensus 505 ~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L 541 (542)
.+||.|.+|.+|+....++++++++|+..||+|.+++
T Consensus 230 ~~l~~g~~~v~TG~l~~~R~e~~~~~~~~G~~v~~sV 266 (313)
T PRK06063 230 RPLVQGMRVALSAEVSRTHEELVERILHAGLAYSDSV 266 (313)
T ss_pred CcccCCCEEEEecCCCCCHHHHHHHHHHcCCEecCcc
Confidence 3589999999999887789999999999999998764
No 123
>KOG2481 consensus Protein required for normal rRNA processing [RNA processing and modification]
Probab=68.54 E-value=3.6 Score=46.13 Aligned_cols=34 Identities=32% Similarity=0.571 Sum_probs=29.8
Q ss_pred CCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEecc
Q 009150 505 GGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSK 540 (542)
Q Consensus 505 ~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~ 540 (542)
..||+|++|||...+ |++.|+-||.++||.|.-.
T Consensus 325 kslF~glkFfl~reV--PresL~fiI~s~GG~V~wd 358 (570)
T KOG2481|consen 325 KSLFSGLKFFLNREV--PRESLEFIIRSFGGKVSWD 358 (570)
T ss_pred HHHhhcceeeeeccC--chHHHHHHHHHcCCceecC
Confidence 579999999999876 4799999999999998643
No 124
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=68.53 E-value=6.7 Score=39.71 Aligned_cols=47 Identities=9% Similarity=0.072 Sum_probs=42.8
Q ss_pred cChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccccccc
Q 009150 174 KGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTAVS 220 (542)
Q Consensus 174 kGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~~~ 220 (542)
.|-...|+..+.+.+++.|+.+|++.+-.....+|.++||...+.+.
T Consensus 20 ~~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~~~~~~~~g~~~e~~i~ 66 (266)
T TIGR03827 20 GNDVEALIPDLDALAKKEGYTKIIAKVPGSDKPLFEERGYLEEAKIP 66 (266)
T ss_pred CccHHHHHHHHHHHHHHcCCcEEEEEccHHHHHHHHHCCCeEEEecc
Confidence 45588999999999999999999999999999999999999988764
No 125
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=68.36 E-value=29 Score=32.12 Aligned_cols=41 Identities=20% Similarity=0.120 Sum_probs=28.3
Q ss_pred eeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccch
Q 009150 162 VPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESE 205 (542)
Q Consensus 162 I~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~ 205 (542)
|--|-|+++.|++|+|++|.++.++ +.++.-.-+--|+-|+
T Consensus 49 vLDFyVhes~QR~G~Gk~LF~~ML~---~e~~~p~~~a~DrPS~ 89 (120)
T PF05301_consen 49 VLDFYVHESRQRRGYGKRLFDHMLQ---EENVSPHQLAIDRPSP 89 (120)
T ss_pred eeeEEEEeceeccCchHHHHHHHHH---HcCCCcccceecCCcH
Confidence 4556799999999999999987654 4555544444444443
No 126
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=65.75 E-value=6 Score=33.22 Aligned_cols=27 Identities=22% Similarity=0.236 Sum_probs=24.0
Q ss_pred eeeeeeccCccccChHHHHHHHHHHHH
Q 009150 162 VPLAAVSSIYQHKGVGRLLYLELRKRL 188 (542)
Q Consensus 162 I~~~AV~~~~QgkGiG~~Lv~~l~~~l 188 (542)
|.-+=|++.+|++||+++|++.+.+..
T Consensus 8 I~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 8 ISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred eEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 677889999999999999999988764
No 127
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=64.09 E-value=33 Score=37.40 Aligned_cols=99 Identities=18% Similarity=0.168 Sum_probs=59.3
Q ss_pred cccceeEEEeeecccCCCCc---EEEEEEeeecc--CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 009150 124 LNGKYCTLLLKSSFMDDDDV---VVAAITYQIVP--ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC 198 (542)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~---VIg~i~~~i~~--~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l 198 (542)
+|...+..+++...+.+..- ++|..++.-++ ++.-=+-|-.+-|-|.||++|+|+.|++.+....... .+|+-
T Consensus 177 tde~w~~~lv~EK~~~d~~~ly~~~gy~tiyk~y~yid~~R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~--p~v~D 254 (403)
T KOG2696|consen 177 TDECWLIYLVYEKKEEDGDTLYAYVGYYTIYKFYEYIDRIRPRISQMLILPPFQGKGLGSQLYEAIARDYLEE--PTVLD 254 (403)
T ss_pred CCCceEEEEeeeecccCCceeEeeeeeEEEeehhhhhhhhhhhhheeEEeccccCCchHHHHHHHHHHhhccC--CceeE
Confidence 45555555555554323333 44444443333 4433345789999999999999999999998655543 66766
Q ss_pred Ecccc-chhhhhhcCccccccccccccCCC
Q 009150 199 WGDKE-SEGFWHKQDTSADTAVSLKFCFPV 227 (542)
Q Consensus 199 ~a~~~-A~~Fw~KqGF~~~~~~~~~~~~~~ 227 (542)
.|... ++.|=.=.-|.. ..+|.+|+.
T Consensus 255 iTVEdPse~F~~LRD~vd---~~r~~sl~~ 281 (403)
T KOG2696|consen 255 ITVEDPSEAFDSLRDRVD---IVRLRSLDV 281 (403)
T ss_pred EEecCchHHHHHHHHHHH---HHHhccccc
Confidence 77765 666633222222 255555543
No 128
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=63.11 E-value=8.2 Score=37.98 Aligned_cols=57 Identities=16% Similarity=0.114 Sum_probs=45.2
Q ss_pred ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhh---hcCccc
Q 009150 158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWH---KQDTSA 215 (542)
Q Consensus 158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~---KqGF~~ 215 (542)
=-||+...+|.|+.+|.|||..| ..+.-.|+++|+...|--....=..++. ++|...
T Consensus 84 LVaElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVPF~FGtVR~al~~Hv~R~~R~gl~t 143 (196)
T PF02474_consen 84 LVAELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVPFGFGTVRHALRNHVERLCRNGLAT 143 (196)
T ss_pred eEEEEEEEEeeccccccccchhh-hhhhhHHHhcCCCeecccchHHHHHHHHHHhccchhh
Confidence 36889999999999999999976 6999999999999988766665444444 455543
No 129
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=61.64 E-value=22 Score=38.56 Aligned_cols=55 Identities=22% Similarity=0.273 Sum_probs=45.4
Q ss_pred CCcEEEEEEeeecc---CCC--ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcE
Q 009150 141 DDVVVAAITYQIVP---ADT--QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRT 195 (542)
Q Consensus 141 ~~~VIg~i~~~i~~---~d~--~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~ 195 (542)
..++||-|..+..- -|+ ..+||-|+||+..-|+++++.-|++|+-.+..-.||=.
T Consensus 144 s~kLVaFIsaiP~~irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gIfq 203 (421)
T KOG2779|consen 144 SKKLVAFISAIPATIRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGIFQ 203 (421)
T ss_pred CCceEEEEeccccEEEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhhhhh
Confidence 45899988776543 232 68999999999999999999999999999988877644
No 130
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=59.47 E-value=8.3 Score=30.33 Aligned_cols=30 Identities=17% Similarity=0.256 Sum_probs=23.7
Q ss_pred EEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150 512 NIIMAAHIQPPIKTLSAIVRSAGGNVSSKY 541 (542)
Q Consensus 512 ~f~Is~~v~p~~~~L~~LIeagGG~V~~~L 541 (542)
.|++++.....++.|..++++.||++...|
T Consensus 2 ~i~~sg~~~~~~~~l~~~i~~~Gg~~~~~l 31 (63)
T PF12738_consen 2 VICFSGFSGKERSQLRKLIEALGGKYSKDL 31 (63)
T ss_dssp EEEEEEB-TTTCCHHHHHHHCTT-EEESSS
T ss_pred EEEECCCCHHHHHHHHHHHHHCCCEEeccc
Confidence 577887766668999999999999998875
No 131
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=58.77 E-value=17 Score=35.24 Aligned_cols=72 Identities=18% Similarity=0.143 Sum_probs=42.8
Q ss_pred cCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHH
Q 009150 112 TGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQS 190 (542)
Q Consensus 112 ~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~ 190 (542)
+-.+..|+.|+ -+..+.-+ .- ++=+.+|.++.---.+...++++.-|||.+..||.|++..+-+.+.+.-..
T Consensus 48 ~~~v~~yl~~l-~~~~~~iy-~d-----~~y~~~AIVt~e~~~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~d~p~ 119 (170)
T PF04768_consen 48 KLDVDHYLDRL-NNRLFKIY-VD-----EDYEGAAIVTPEGPDSNGPVPYLDKFAVSKSAQGSGVADNVFNAIRKDFPK 119 (170)
T ss_dssp SSBHTTHHHHH-HTS-SEEE-EE-----TTSSEEEEEEEE-SCTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHHH-SS
T ss_pred cccHHHHHHHh-hccceEEE-Ee-----CCceEEEEEEecCCCCCCCCeEEEEEEecchhhhcCHHHHHHHHHHHhccc
Confidence 33446677776 22333322 11 222344444332122344799999999999999999999999998766433
No 132
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=57.94 E-value=22 Score=36.47 Aligned_cols=62 Identities=21% Similarity=0.217 Sum_probs=51.0
Q ss_pred CCCcEEEEEEeeecc-CCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc
Q 009150 140 DDDVVVAAITYQIVP-ADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK 202 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~-~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~ 202 (542)
.++++||...+..-. .+.-|-+=..++|.+++++.|+|-.|=..=.+.+.++|+.-| .||+.
T Consensus 54 ~dg~lVGls~G~pg~r~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~tli-~WTfD 116 (266)
T COG3375 54 ADGRLVGLSYGYPGGRGGSLYLYSHMLGVREEVKGSGLGVALKMKQRERALSMGYTLI-AWTFD 116 (266)
T ss_pred CCCcEEEEEeccCCcCCCceeeeeeehhccccccccchhhhhHHHHHHHHHhcCeeeE-EEecc
Confidence 466999999877633 455588888999999999999999999999999999999876 35554
No 133
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=57.68 E-value=27 Score=34.62 Aligned_cols=37 Identities=22% Similarity=0.125 Sum_probs=29.4
Q ss_pred CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCC
Q 009150 156 DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGI 193 (542)
Q Consensus 156 d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI 193 (542)
.+.|. +.-..|-|.||++|+|+.|+..-=+-.+..|.
T Consensus 78 ~~~~N-LsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~~ 114 (188)
T PF01853_consen 78 WDNNN-LSCILTLPPYQRKGYGRFLIDFSYELSRREGK 114 (188)
T ss_dssp TT-EE-ESEEEE-GGGTTSSHHHHHHHHHHHHHHHTTS
T ss_pred cCCee-EeehhhcchhhhcchhhhhhhhHHHHhhccCc
Confidence 33566 88889999999999999999998888887763
No 134
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=55.62 E-value=9.6 Score=42.83 Aligned_cols=74 Identities=15% Similarity=0.120 Sum_probs=59.5
Q ss_pred CCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccc---c--chhhhhhcCccc
Q 009150 141 DDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDK---E--SEGFWHKQDTSA 215 (542)
Q Consensus 141 ~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~---~--A~~Fw~KqGF~~ 215 (542)
|+-+||++ ++.-.+ .--+|.-|.++-..=|+++=++||+.+.+.+.+.||.+|..+-.+ + -..||+..||..
T Consensus 471 DnGiigvv--iv~kk~-~~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~FyE~mgf~l 547 (574)
T COG3882 471 DNGIIGVV--IVEKKE-SEWFIDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNAPVSDFYERMGFKL 547 (574)
T ss_pred cCceEEEE--EEEecC-CeEEhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecccccCCcHHHHHHHhcccc
Confidence 44588876 333333 455699999999999999999999999999999999999777655 2 679999999994
Q ss_pred cc
Q 009150 216 DT 217 (542)
Q Consensus 216 ~~ 217 (542)
.+
T Consensus 548 ~~ 549 (574)
T COG3882 548 KG 549 (574)
T ss_pred cc
Confidence 44
No 135
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=54.71 E-value=36 Score=35.47 Aligned_cols=99 Identities=15% Similarity=0.006 Sum_probs=61.7
Q ss_pred ccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcE
Q 009150 116 SMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRT 195 (542)
Q Consensus 116 ~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~ 195 (542)
++|+.++ ++..-..+.++.. ...+|++||++.+... .+ ....+..+-+++++..+-+..|+-++++++++.|++.
T Consensus 181 ~~~f~~l-~~~~~~~~~l~~a-~~~~g~~va~~l~~~~-~~--~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~ 255 (330)
T TIGR03019 181 RRYFRLL-KDVFGEDCEVLTV-RLGDGVVASAVLSFYF-RD--EVLPYYAGGLREARDVAANDLMYWELMRRACERGLRV 255 (330)
T ss_pred HHHHHHH-HHhcccCEEEEEE-EeCCCCEEEEEEEEEe-CC--EEEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcE
Confidence 5666665 3322223333322 2246788888654443 24 3333456778999999999999999999999999998
Q ss_pred EEEEccc---cchhhhhhcCccccccc
Q 009150 196 IFCWGDK---ESEGFWHKQDTSADTAV 219 (542)
Q Consensus 196 I~l~a~~---~A~~Fw~KqGF~~~~~~ 219 (542)
.-+-... +...|=++-||+.+.-.
T Consensus 256 fDfG~s~~~~G~~~FK~~~G~~~~~l~ 282 (330)
T TIGR03019 256 FDFGRSKRGTGPFKFKKNWGFEPQPLH 282 (330)
T ss_pred EEcCCCCCCCccHHHHhcCCCeeccce
Confidence 8543211 23344444577766543
No 136
>PRK06195 DNA polymerase III subunit epsilon; Validated
Probab=54.37 E-value=16 Score=38.33 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=31.7
Q ss_pred CCCCCeEEEEeCCCC-CCHHHHHHHHHhCCCEEeccC
Q 009150 506 GLLRGYNIIMAAHIQ-PPIKTLSAIVRSAGGNVSSKY 541 (542)
Q Consensus 506 ~LF~G~~f~Is~~v~-p~~~~L~~LIeagGG~V~~~L 541 (542)
..|.|.+|++|+... .++++++.+|+..||+|.+++
T Consensus 219 ~~l~g~~~vfTG~l~~~~R~~~~~~~~~~Gg~v~~sV 255 (309)
T PRK06195 219 TAFKEEVVVFTGGLASMTRDEAMILVRRLGGTVGSSV 255 (309)
T ss_pred ccccCCEEEEccccCCCCHHHHHHHHHHhCCEecCCc
Confidence 469999999998874 579999999999999998764
No 137
>PHA02769 hypothetical protein; Provisional
Probab=53.11 E-value=14 Score=34.17 Aligned_cols=45 Identities=20% Similarity=0.251 Sum_probs=36.7
Q ss_pred HHHHHHH---HHHHHHHcCCcEEEEEcccc-chhhhhhcCccccccccc
Q 009150 177 GRLLYLE---LRKRLQSVGIRTIFCWGDKE-SEGFWHKQDTSADTAVSL 221 (542)
Q Consensus 177 G~~Lv~~---l~~~lk~~GI~~I~l~a~~~-A~~Fw~KqGF~~~~~~~~ 221 (542)
|-.|++. +.+.+++-|+.-.+++++++ +++.|.|-||..++...|
T Consensus 94 gd~lvnfl~~l~~k~~~dg~evlwtlgfpdhsnaly~kagfk~vg~tsr 142 (154)
T PHA02769 94 GDHLVNFLNDLAEKLKKDGFEVLWTLGFPDHSNALYKKAGFKLVGQTSR 142 (154)
T ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEecCCCcchhHHhhhhhhHhccccc
Confidence 5566654 56677788999999999997 999999999999987733
No 138
>PRK14350 ligA NAD-dependent DNA ligase LigA; Provisional
Probab=50.01 E-value=21 Score=41.67 Aligned_cols=36 Identities=11% Similarity=0.118 Sum_probs=31.5
Q ss_pred CCCCCeEEEEeCCCC-CCHHHHHHHHHhCCCEEeccC
Q 009150 506 GLLRGYNIIMAAHIQ-PPIKTLSAIVRSAGGNVSSKY 541 (542)
Q Consensus 506 ~LF~G~~f~Is~~v~-p~~~~L~~LIeagGG~V~~~L 541 (542)
..|.|.+|++|+... .++++++.+|++.||+|..+.
T Consensus 592 ~~l~gktfV~TG~l~~~~R~e~~~lie~~Ggkv~ssV 628 (669)
T PRK14350 592 SFLFGKKFCITGSFNGYSRSVLIDKLTKKGAIFNTCV 628 (669)
T ss_pred CccCCcEEEEecccCCCCHHHHHHHHHHcCCEEeccc
Confidence 469999999998774 579999999999999998763
No 139
>PLN03122 Poly [ADP-ribose] polymerase; Provisional
Probab=47.25 E-value=26 Score=41.81 Aligned_cols=38 Identities=18% Similarity=0.352 Sum_probs=32.9
Q ss_pred CCCCCCCeEEEEeCCCCCCHHHHHHHHHhCCCEEeccC
Q 009150 504 PGGLLRGYNIIMAAHIQPPIKTLSAIVRSAGGNVSSKY 541 (542)
Q Consensus 504 ~~~LF~G~~f~Is~~v~p~~~~L~~LIeagGG~V~~~L 541 (542)
..+.|.|+.|.|++....+++.++.+|+..||++..++
T Consensus 186 ~~kpL~G~~fviTGtl~~sr~elK~~Ie~~GGkvsssV 223 (815)
T PLN03122 186 PGKPFSGMMISLSGRLSRTHQYWKKDIEKHGGKVANSV 223 (815)
T ss_pred cCCCcCCcEEEEeCCCCCCHHHHHHHHHHcCCEEcccc
Confidence 34579999999999876689999999999999998763
No 140
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=47.16 E-value=67 Score=29.18 Aligned_cols=30 Identities=20% Similarity=0.208 Sum_probs=27.6
Q ss_pred CceeEeeeeeeccCccc-cChHHHHHHHHHH
Q 009150 157 TQYAEVPLAAVSSIYQH-KGVGRLLYLELRK 186 (542)
Q Consensus 157 ~~~aeI~~~AV~~~~Qg-kGiG~~Lv~~l~~ 186 (542)
..++++.-|||.+..|| .|++..+.+.+.+
T Consensus 37 ~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~ 67 (108)
T cd04266 37 EKIAYLDKFAVLPKAQGSDGIADILFNAMLD 67 (108)
T ss_pred CCceEEEEEEEccccccccchHHHHHHHHHH
Confidence 57899999999999997 8999999998887
No 141
>PRK05601 DNA polymerase III subunit epsilon; Validated
Probab=46.43 E-value=57 Score=35.70 Aligned_cols=72 Identities=13% Similarity=-0.003 Sum_probs=55.3
Q ss_pred CCCeEEEEcccCChhhHHHHHHHHHHcCcEEeccCCcee-EEEECC-CCCcHHHHHHHhcCCeEeCHHHHHHHHH
Q 009150 396 GKCFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDGSTST-HVVTGK-VRKTLNFLTALCSGAWIVSPNWLKESFR 468 (542)
Q Consensus 396 ~k~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~~~~T-HLIt~k-~~RTlKfL~AIA~G~wIVSpsWL~dSlk 468 (542)
.++.+|+|++-...+ ++.|.+.+-..|-.|++....-| .|||+. -.-+-|.+.|-..|+|+|+..=+.+.++
T Consensus 295 v~Gm~v~~~~e~~~~-~d~li~~~~~agL~y~~~~~r~tslvv~n~~~~~~gk~~~a~~~gipl~~d~~fl~~~~ 368 (377)
T PRK05601 295 VAGMEVVVAPEITMD-PDIIIQAIVRAGLAYSEKLTRQTSVVVCNQTRDLDGKAMHAQRKGIPLLSDVAFLAAVE 368 (377)
T ss_pred ccCcEEEEeCCccCC-HHHHHHHHHHccchhhhccccceeEEEeCCCCCccchhhhhhhcCCCccCHHHHHHHHH
Confidence 467999999966544 56788888899999999985555 555654 2446799999999999999876666554
No 142
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=45.38 E-value=63 Score=32.64 Aligned_cols=87 Identities=15% Similarity=0.108 Sum_probs=65.1
Q ss_pred CCCcEEEEEEeeec-------------------cCCCceeEeeeeeecc--CccccC----hHHHHHHHHHHHHHHcCCc
Q 009150 140 DDDVVVAAITYQIV-------------------PADTQYAEVPLAAVSS--IYQHKG----VGRLLYLELRKRLQSVGIR 194 (542)
Q Consensus 140 ~~~~VIg~i~~~i~-------------------~~d~~~aeI~~~AV~~--~~QgkG----iG~~Lv~~l~~~lk~~GI~ 194 (542)
.+|+|+||.=+..- |.+..+-|.--|||+. .-++.| ++..|+..+.+++...|++
T Consensus 60 ~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~~ 139 (209)
T COG3916 60 SDGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGIT 139 (209)
T ss_pred CCCcEEEEEEeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCCc
Confidence 58899999844321 2334788888899997 333322 4778999999999999999
Q ss_pred EEEEEccccchhhhhhcCccccccccccccCCC
Q 009150 195 TIFCWGDKESEGFWHKQDTSADTAVSLKFCFPV 227 (542)
Q Consensus 195 ~I~l~a~~~A~~Fw~KqGF~~~~~~~~~~~~~~ 227 (542)
+|.++++..=+..+++.||.....-.- .++++
T Consensus 140 ~IvtVt~~~meril~r~Gw~~~riG~~-~~ig~ 171 (209)
T COG3916 140 GIVTVTDTGMERILRRAGWPLTRIGPP-LTIGN 171 (209)
T ss_pred eEEEEEchHHHHHHHHcCCCeEEcCCc-eeeCC
Confidence 999999999999999999987654322 24555
No 143
>PRK00756 acyltransferase NodA; Provisional
Probab=43.50 E-value=31 Score=33.92 Aligned_cols=60 Identities=17% Similarity=0.137 Sum_probs=46.0
Q ss_pred ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEcccc----chhhhhhcCccccccc
Q 009150 158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKE----SEGFWHKQDTSADTAV 219 (542)
Q Consensus 158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~----A~~Fw~KqGF~~~~~~ 219 (542)
=-||++..+|.|+.+|.||+..| ..+.-.|+++|+..-|--.... -+.| .++|...+-.-
T Consensus 84 LVaElGLygVRpDLEGlGi~~S~-r~m~PvLq~LgVPF~FGtVR~al~~Hv~R~-~r~g~~ti~~g 147 (196)
T PRK00756 84 LVAELGLYGVRPDLEGLGIAHSI-RAMYPVLQELGVPFAFGTVRHALRNHVERL-CRNGLATIVTG 147 (196)
T ss_pred eEEEeeeeeeccccccccchhhH-HHHHHHHHhcCCCeecccchHHHHHHHHHH-hccCcceeccc
Confidence 36889999999999999999877 6889999999999876544432 2334 47887766543
No 144
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=39.28 E-value=59 Score=34.38 Aligned_cols=31 Identities=23% Similarity=0.245 Sum_probs=27.3
Q ss_pred eeeeeeccCccccChHHHHHHHHHHHHHHcC
Q 009150 162 VPLAAVSSIYQHKGVGRLLYLELRKRLQSVG 192 (542)
Q Consensus 162 I~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~G 192 (542)
+.-..|-|.||++|+|+.|++.-=+-.+..|
T Consensus 158 LaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 158 LACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred EEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 7778899999999999999998888777765
No 145
>TIGR00575 dnlj DNA ligase, NAD-dependent. The member of this family from Treponema pallidum differs in having three rather than just one copy of the BRCT (BRCA1 C Terminus) domain (pfam00533) at the C-terminus. It is included in the seed.
Probab=39.11 E-value=38 Score=39.40 Aligned_cols=36 Identities=17% Similarity=0.339 Sum_probs=31.6
Q ss_pred CCCCCeEEEEeCCCC-CCHHHHHHHHHhCCCEEeccC
Q 009150 506 GLLRGYNIIMAAHIQ-PPIKTLSAIVRSAGGNVSSKY 541 (542)
Q Consensus 506 ~LF~G~~f~Is~~v~-p~~~~L~~LIeagGG~V~~~L 541 (542)
..|.|.+|++|+... .++++++.+|+..||+|..++
T Consensus 583 ~~l~gk~~v~TG~l~~~~R~~~~~~i~~~G~~v~~sV 619 (652)
T TIGR00575 583 SPLAGKTFVLTGTLSQMSRDEAKELLENLGGKVASSV 619 (652)
T ss_pred CCccCcEEEEeccCCCCCHHHHHHHHHHcCCEEeCCc
Confidence 469999999998875 579999999999999998764
No 146
>PRK14351 ligA NAD-dependent DNA ligase LigA; Provisional
Probab=38.43 E-value=39 Score=39.62 Aligned_cols=37 Identities=19% Similarity=0.401 Sum_probs=32.0
Q ss_pred CCCCCCeEEEEeCCCC-CCHHHHHHHHHhCCCEEeccC
Q 009150 505 GGLLRGYNIIMAAHIQ-PPIKTLSAIVRSAGGNVSSKY 541 (542)
Q Consensus 505 ~~LF~G~~f~Is~~v~-p~~~~L~~LIeagGG~V~~~L 541 (542)
...|.|.+|++|+... .++++++.+|+..||+|..++
T Consensus 607 ~~~l~g~~~v~TG~l~~~~R~~~~~~i~~~Gg~v~~sV 644 (689)
T PRK14351 607 GDALDGLTFVFTGSLSGYTRSEAQELVEAHGGNATGSV 644 (689)
T ss_pred CCCCCCcEEEEccCCCCCCHHHHHHHHHHcCCEEcCCc
Confidence 3469999999998875 489999999999999998764
No 147
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=37.72 E-value=1.5e+02 Score=30.78 Aligned_cols=56 Identities=16% Similarity=0.268 Sum_probs=47.3
Q ss_pred CCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 009150 140 DDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC 198 (542)
Q Consensus 140 ~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l 198 (542)
.+|++||+...=+.|.+ .--++ +.-||++....+|+..+-.=+.+++..|+.+++|
T Consensus 158 ~~G~LvAVavtDvL~dG--lSsVY-~FydPd~s~~SLGt~~iL~~I~~aq~~~l~yvYL 213 (253)
T COG2935 158 GEGKLVAVAVTDVLPDG--LSSVY-TFYDPDMSKRSLGTLSILDQIAIAQRLGLPYVYL 213 (253)
T ss_pred CCCcEEEEEeeecccCc--ceeEE-EEeCCChhhhcchHHHHHHHHHHHHHhCCCeEEE
Confidence 47899999888888866 44233 4569999999999999999999999999999976
No 148
>PRK07956 ligA NAD-dependent DNA ligase LigA; Validated
Probab=37.38 E-value=42 Score=39.22 Aligned_cols=35 Identities=14% Similarity=0.275 Sum_probs=31.0
Q ss_pred CCCCeEEEEeCCCCC-CHHHHHHHHHhCCCEEeccC
Q 009150 507 LLRGYNIIMAAHIQP-PIKTLSAIVRSAGGNVSSKY 541 (542)
Q Consensus 507 LF~G~~f~Is~~v~p-~~~~L~~LIeagGG~V~~~L 541 (542)
.|.|.+|++|+.... ++++++.+|+..||+|..++
T Consensus 590 ~~~g~~~v~TG~l~~~~R~e~~~~i~~~G~~v~~sV 625 (665)
T PRK07956 590 DLAGKTVVLTGTLEQLSRDEAKEKLEALGAKVSGSV 625 (665)
T ss_pred CccccEEEEeCCCCCCCHHHHHHHHHHcCCEEeCcc
Confidence 499999999998754 89999999999999998764
No 149
>PRK14852 hypothetical protein; Provisional
Probab=36.86 E-value=81 Score=38.61 Aligned_cols=78 Identities=9% Similarity=-0.075 Sum_probs=66.3
Q ss_pred CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhh-hcCccccccccccccCCCCCCCcee
Q 009150 156 DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWH-KQDTSADTAVSLKFCFPVKPCEKSS 234 (542)
Q Consensus 156 d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~-KqGF~~~~~~~~~~~~~~~~c~ea~ 234 (542)
+..++|+--|||++..+.+-+=-.|++.+.++....++..++.-.+..=..||+ -.||+..++.+.++..... |+
T Consensus 118 Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPkH~~FY~r~l~f~~ig~~r~~p~VnaP----Av 193 (989)
T PRK14852 118 GRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPKHVKFYTDIFLFKPFGEVRHYDTVDAP----AV 193 (989)
T ss_pred CCeEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcchHHHHHHHhCCccccccccCCCCCcc----hh
Confidence 458999999999888777666667777777777888999999999989999999 5799999999888888776 88
Q ss_pred EEE
Q 009150 235 LVT 237 (542)
Q Consensus 235 lm~ 237 (542)
+|.
T Consensus 194 ll~ 196 (989)
T PRK14852 194 ALR 196 (989)
T ss_pred hee
Confidence 888
No 150
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=36.45 E-value=62 Score=31.78 Aligned_cols=57 Identities=19% Similarity=0.251 Sum_probs=50.9
Q ss_pred ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEEEccccchhhhhhcCcccccc
Q 009150 158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFCWGDKESEGFWHKQDTSADTA 218 (542)
Q Consensus 158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~KqGF~~~~~ 218 (542)
+.+||+.||.. ..|.++.|+..+...|...|+++++.-+-..=...+.|.|.....-
T Consensus 86 ~IvEvGnLAs~----~~g~~~~l~~~l~~~L~~~g~~w~vfTaT~~lr~~~~rlgl~~~~L 142 (179)
T PF12261_consen 86 QIVEVGNLASF----SPGAARLLFAALAQLLAQQGFEWVVFTATRQLRNLFRRLGLPPTVL 142 (179)
T ss_pred heeEeechhhc----CcccHHHHHHHHHHHHHHCCCCEEEEeCCHHHHHHHHHcCCCceec
Confidence 68999999977 4899999999999999999999998888878888899999987763
No 151
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=35.03 E-value=70 Score=27.71 Aligned_cols=56 Identities=20% Similarity=0.279 Sum_probs=37.0
Q ss_pred eecccceeEEEeeecccCCCCcEEEEEEeeecc---------------------CCCceeEeeeeeeccCccccChHHHH
Q 009150 122 CVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVP---------------------ADTQYAEVPLAAVSSIYQHKGVGRLL 180 (542)
Q Consensus 122 ~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~---------------------~d~~~aeI~~~AV~~~~QgkGiG~~L 180 (542)
=-||..+.-+++... .. ++||++=++... ....++||.-+||+++||+...-..|
T Consensus 24 D~fD~~~~h~lv~~~---~~-~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L 99 (101)
T PF13444_consen 24 DEFDEHSVHLLVRDK---NT-EVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLL 99 (101)
T ss_pred cCCCCCccEEEEEEC---CC-CEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHH
Confidence 336765555555532 22 599987554432 11378999999999999998776665
Q ss_pred H
Q 009150 181 Y 181 (542)
Q Consensus 181 v 181 (542)
.
T Consensus 100 ~ 100 (101)
T PF13444_consen 100 W 100 (101)
T ss_pred h
Confidence 4
No 152
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=34.87 E-value=49 Score=38.62 Aligned_cols=35 Identities=17% Similarity=0.334 Sum_probs=31.8
Q ss_pred CCCCCeEEEEeCCCC-CCHHHHHHHHHhCCCEEecc
Q 009150 506 GLLRGYNIIMAAHIQ-PPIKTLSAIVRSAGGNVSSK 540 (542)
Q Consensus 506 ~LF~G~~f~Is~~v~-p~~~~L~~LIeagGG~V~~~ 540 (542)
..|.|.+|.+|+... .++++.+.+|++.||+|..+
T Consensus 593 ~~l~gkt~V~TGtL~~~sR~eak~~le~lGakv~~S 628 (667)
T COG0272 593 SPLAGKTFVLTGTLEGMSRDEAKALLEALGAKVSGS 628 (667)
T ss_pred cccCCCEEEEeccCCCCCHHHHHHHHHHcCCEEece
Confidence 679999999998876 68999999999999999865
No 153
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=34.67 E-value=2.2e+02 Score=32.69 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=80.5
Q ss_pred ccchhhhHHHHHHHHhhccCCchhhh--hcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEeeeccCCCceeEe
Q 009150 85 DSCSKSYLQDVLQIYSRELPTMNYAA--NTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQIVPADTQYAEV 162 (542)
Q Consensus 85 ~~~~~~~l~d~~~i~~~~lp~m~~~a--~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~i~~~d~~~aeI 162 (542)
+++..+.+.+.++|.. .|- .+++..+|--. .||..|-....+-.. +.+|+|+|-..+...+.++++- |
T Consensus 352 ~~~~~~~l~eL~~iSD-------~Wl~~~~~rEkgFsLG-~fdp~yl~~~~va~~-~~~g~VvaFa~l~~~~~~~~~S-l 421 (538)
T COG2898 352 PDQSPAELDELRAISD-------EWLDHKTRREKGFSLG-FFDPRYLDIFPVAAV-DNEGEVVAFANLMPTGGKEGYS-L 421 (538)
T ss_pred CccChHHHHHHHHhCH-------HhhhcCCcccceeecc-CCCccccccceeeEE-cCCCCeEEEEeecccCCcceeE-E
Confidence 5667888888888877 453 36667778888 799999888777654 3566799988777766665666 7
Q ss_pred eeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 009150 163 PLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC 198 (542)
Q Consensus 163 ~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l 198 (542)
..+=-+|+. =+|+=..|+.++...+|+.|+.++-+
T Consensus 422 DlMR~sp~a-p~g~mdfLf~~li~~aKe~G~~~fsL 456 (538)
T COG2898 422 DLMRRSPDA-PNGTMDFLFSELILWAKEEGYQRFSL 456 (538)
T ss_pred EeeecCCCC-CchHHHHHHHHHHHHHHHcCCeEEec
Confidence 777777766 57999999999999999999999833
No 154
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=34.44 E-value=17 Score=40.51 Aligned_cols=64 Identities=16% Similarity=0.149 Sum_probs=49.5
Q ss_pred CCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEE-------EEccc-cchhhhhhcCccccccc
Q 009150 156 DTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIF-------CWGDK-ESEGFWHKQDTSADTAV 219 (542)
Q Consensus 156 d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~-------l~a~~-~A~~Fw~KqGF~~~~~~ 219 (542)
++.-|-|.-..|+|+||+-|+|.+-|..+.+...+.-|...+ +.+.- -=..||.|.||.-.-+.
T Consensus 238 ntaaariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfkylwdt 309 (593)
T COG2401 238 NTAAARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKYLWDT 309 (593)
T ss_pred hhhhhheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceeeeeec
Confidence 334567999999999999999999999999999998776552 11111 14689999999876655
No 155
>PLN03239 histone acetyltransferase; Provisional
Probab=32.39 E-value=73 Score=34.55 Aligned_cols=34 Identities=21% Similarity=0.139 Sum_probs=28.2
Q ss_pred eeEeeeeeeccCccccChHHHHHHHHHHHHHHcCC
Q 009150 159 YAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGI 193 (542)
Q Consensus 159 ~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI 193 (542)
|. +.-..|-|.||++|+|+.|++.-=+-.+..|.
T Consensus 214 ~N-LaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg~ 247 (351)
T PLN03239 214 YN-LACILTFPAHQRKGYGRFLIAFSYELSKKEEK 247 (351)
T ss_pred Cc-eEEEEecChhhhcchhhhhHhhhhHhhhhcCC
Confidence 44 77789999999999999999988777776653
No 156
>PTZ00064 histone acetyltransferase; Provisional
Probab=29.00 E-value=77 Score=36.00 Aligned_cols=33 Identities=27% Similarity=0.257 Sum_probs=26.6
Q ss_pred ceeEeeeeeeccCccccChHHHHHHHHHHHHHHc
Q 009150 158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSV 191 (542)
Q Consensus 158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~ 191 (542)
.|. +.-..|-|.||++|+|+.|+..--+..+..
T Consensus 384 ~nN-LACILtLPpyQRKGYGklLIdfSYeLSrrE 416 (552)
T PTZ00064 384 HYN-LACILTLPCYQRKGYGKLLVDLSYKLSLKE 416 (552)
T ss_pred cCc-eEEEEecchhhhcchhhhhhhhhhhhhhhc
Confidence 344 777899999999999999998776665554
No 157
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=27.89 E-value=4.1e+02 Score=27.74 Aligned_cols=98 Identities=24% Similarity=0.338 Sum_probs=62.9
Q ss_pred CceEEeeCCCCccccchhhhHHHHHHHHhhccCCchhhhhcCccccceeeeecccceeEEEeeecccCCCCcEEEEEEee
Q 009150 72 EYIFVLVNPKDAEDSCSKSYLQDVLQIYSRELPTMNYAANTGKRSMFLEKCVLNGKYCTLLLKSSFMDDDDVVVAAITYQ 151 (542)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~d~~~i~~~~lp~m~~~a~~g~~~~~i~r~v~~~~~~~l~~~~~~~~~~~~VIg~i~~~ 151 (542)
+..++.|||.+- ...+-+++|+..+-..||--=. ++.-|. .++.+.+-.++ ...||||+ .
T Consensus 88 ~~rIv~V~~~~s--~~~~kk~~Ev~~~VnnELg~~~----------~~~~~~--~~~k~~lFIS~----rk~~VGcL--v 147 (257)
T KOG3014|consen 88 DGRIVYVNPEDS--PAALKKVEEVMKMVNNELGYQQ----------IENQCW--PKIKTFLFISV----RKIVVGCL--V 147 (257)
T ss_pred CCeEEEEeCCCC--hHHHHHHHHHHHHHHhhcCCcc----------cccccc--cceeEEEEEEe----cceeeeEE--E
Confidence 788999999885 5566677777777776664322 233332 45555544443 33488854 3
Q ss_pred ecc----------CC------------------CceeEeeeeeeccCccccChHHHHHHHHHHHHH
Q 009150 152 IVP----------AD------------------TQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQ 189 (542)
Q Consensus 152 i~~----------~d------------------~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk 189 (542)
+.| ++ ..+.=|--.=|++..|++||+++|+.-+.....
T Consensus 148 aE~Is~a~~~i~~~~~~~~~~s~~~~~~s~~~~~~~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~ 213 (257)
T KOG3014|consen 148 AEPISQAFRVIESPGVTDSYDSQKAWQNSPLPEPAICGISRIWVSSLRRRKGIASLLLDVARCNFV 213 (257)
T ss_pred ehhhhhhhhhccCcCcccchhhHHHhccCCCCCCcEeeeEEEEeehhhhhhhhHHHHHHHHHHhhh
Confidence 222 11 123446677899999999999999988776544
No 158
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=26.13 E-value=5.4e+02 Score=32.13 Aligned_cols=58 Identities=28% Similarity=0.249 Sum_probs=47.2
Q ss_pred cCCCCcEEEEEEeeeccCCCceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 009150 138 MDDDDVVVAAITYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIRTIFC 198 (542)
Q Consensus 138 ~~~~~~VIg~i~~~i~~~d~~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~~I~l 198 (542)
.+.+|+|+|.+.+...+. .++. |.++--+++. =.|+=-.|+.++.+++++.|+..+-|
T Consensus 426 ~d~~G~i~af~s~~p~~~-~g~s-lDLMRr~pda-pnGvmE~L~~~l~~~~k~~G~~~~sL 483 (1094)
T PRK02983 426 HDADGQVVALLSFVPWGR-RGLS-LDLMRRSPDA-PNGVIELMVAELALEAESLGITRISL 483 (1094)
T ss_pred ECCCCeEEEEEEEeeeCC-CCEE-EEecccCCCC-CCCHHHHHHHHHHHHHHHcCCCEEEe
Confidence 356889999998888553 3455 7777777764 89999999999999999999999944
No 159
>KOG3548 consensus DNA damage checkpoint protein RHP9/CRB2/53BP1 [Replication, recombination and repair]
Probab=24.37 E-value=1.5e+02 Score=36.10 Aligned_cols=77 Identities=16% Similarity=0.105 Sum_probs=46.0
Q ss_pred CeEEEEcccCChhhHHHHHHHHHHcCcEEeccC-----------CceeEEEECCCCCcHHHHHHHhcCCeEeCHHHHHHH
Q 009150 398 CFRIMLMNIADDSKKVHLTKVIEDLGGAVTSDG-----------STSTHVVTGKVRKTLNFLTALCSGAWIVSPNWLKES 466 (542)
Q Consensus 398 ~~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d~-----------~~~THLIt~k~~RTlKfL~AIA~G~wIVSpsWL~dS 466 (542)
...|+++|-..... +.-.+.++..|+.+++-. .....+++....|+.-+-+|=..|+++|+++||.+|
T Consensus 1073 ~~~v~q~gp~~~f~-e~~~e~le~G~aa~vd~~hada~~~D~~l~~fdvvl~d~~~~~svmk~ad~l~~pvvs~EWvIQt 1151 (1176)
T KOG3548|consen 1073 AREVTQTGPGGTFI-EIWKEILELGGAAVVDGYHADAETLDETLLKFDVVLVDGTFRDSVMKYADTLGAPVVSSEWVIQT 1151 (1176)
T ss_pred ceeEEEecCCcchH-HHHHHHHHhhchheecccccccccccccccceeEEEecCccHHHHHHHHHHhCCCccChhHhhee
Confidence 35666776544432 223445555555555431 122233344445666666677788999999999999
Q ss_pred HHcCCCCCC
Q 009150 467 FREGRFVDE 475 (542)
Q Consensus 467 lk~Gk~LdE 475 (542)
+-.|.-+-.
T Consensus 1152 iI~~~~i~~ 1160 (1176)
T KOG3548|consen 1152 IILGKAIEP 1160 (1176)
T ss_pred eeccccCCc
Confidence 887775543
No 160
>PRK04531 acetylglutamate kinase; Provisional
Probab=22.73 E-value=73 Score=34.92 Aligned_cols=57 Identities=21% Similarity=0.154 Sum_probs=40.5
Q ss_pred ceeEeeeeeeccCccccChHHHHHHHHHHHHHHcCCc-----EEEEEccccchhhhhhcCcc
Q 009150 158 QYAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVGIR-----TIFCWGDKESEGFWHKQDTS 214 (542)
Q Consensus 158 ~~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~GI~-----~I~l~a~~~A~~Fw~KqGF~ 214 (542)
..+++.-|||.+..||.|++..+.+.+.+...++=++ .+--|=+..|.|+|++.||.
T Consensus 309 ~~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~~~~L~Wrsr~~n~~~~Wyf~~s~G~~~~~~~~ 370 (398)
T PRK04531 309 GGPYLDKFAVLDDARGEGLGRAVWNVMREETPQLFWRSRHNNTINKFYYAESDGCIKQEKWK 370 (398)
T ss_pred CceEeEEEEEccchhhcChHHHHHHHHHhhCCceEEEcCCCCCccceeeecccceEecCCcE
Confidence 4899999999999999999999999888765322110 01112233488888888875
No 161
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=22.29 E-value=80 Score=35.34 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=26.3
Q ss_pred eeEeeeeeeccCccccChHHHHHHHHHHHHHHcC
Q 009150 159 YAEVPLAAVSSIYQHKGVGRLLYLELRKRLQSVG 192 (542)
Q Consensus 159 ~aeI~~~AV~~~~QgkGiG~~Lv~~l~~~lk~~G 192 (542)
|. +.-..|-|.||++|+|+.|+..--+..+..|
T Consensus 307 ~N-LaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 307 YN-LACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred Cc-eEEEEecchhhhcchhheehhheehhhhccC
Confidence 44 7778899999999999999987666555544
No 162
>KOG2093 consensus Translesion DNA polymerase - REV1 deoxycytidyl transferase [Replication, recombination and repair]
Probab=22.20 E-value=1.5e+02 Score=35.95 Aligned_cols=116 Identities=15% Similarity=0.139 Sum_probs=68.3
Q ss_pred eEEEEcccCChhhHHHHHHHHHHcCcEEecc--CCceeEEEECCCCCcHHHHHHHh---cCCeEeCHHHHHHHHHcCCCC
Q 009150 399 FRIMLMNIADDSKKVHLTKVIEDLGGAVTSD--GSTSTHVVTGKVRKTLNFLTALC---SGAWIVSPNWLKESFREGRFV 473 (542)
Q Consensus 399 ~rVlfSG~~de~kk~~L~kiIkkLGG~V~~d--~~~~THLIt~k~~RTlKfL~AIA---~G~wIVSpsWL~dSlk~Gk~L 473 (542)
+-+..-|..++. ..++...-.-.|+..... ...+||+|+.... .++. .+-...+++|+.+|.+.|+.+
T Consensus 51 is~~~ngs~~e~-~nelk~~~~~~t~~~~~~~~rs~T~~ii~~~l~------a~~vk~~~~~~~~~~e~iie~~~~~~~~ 123 (1016)
T KOG2093|consen 51 ISISVNGSTDES-ANELKLQNMFHTGASAASYERSGTENIIAQGLP------ADLVKGFTIPKHISIEWIIECCENGMDV 123 (1016)
T ss_pred eeeccCCccccc-hHHHhhhhhhcccccccccccccceeeecccch------HHHhccccchhhhcHHHHHHHHhccCcc
Confidence 334444544544 345666666667765533 2789999987632 1222 234567899999999999999
Q ss_pred CCCCcccCCch-hhhh-cCCChHHHH--HHhhcCCCCCCCCeEEEEeCCCCC
Q 009150 474 DESSYMLNDDD-YVLK-YRSELKDSV--LRAKARPGGLLRGYNIIMAAHIQP 521 (542)
Q Consensus 474 dEe~YeL~d~~-~e~~-~g~~L~~sl--~rAr~~~~~LF~G~~f~Is~~v~p 521 (542)
+--+|.+.... .+.. +-+...... ++.......+|.+..|+|.+...|
T Consensus 124 ~~~~~~~~t~~~h~q~~~~~~~~~~~~D~q~~~~~~ki~~~n~ikinG~~E~ 175 (1016)
T KOG2093|consen 124 GYYPYQLYTGQSHEQAQLAFPVTSFPKDQQISSQSSKIFKNNVIKINGYNEP 175 (1016)
T ss_pred ccccceeeccchhcccccCCCcccCCccccccccchhccccceeeecCCCCc
Confidence 98888765432 2221 111100000 011223567999999999875443
Done!