BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009157
(542 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana
GN=ULP1D PE=1 SV=1
Length = 584
Score = 358 bits (918), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 223/564 (39%), Positives = 314/564 (55%), Gaps = 77/564 (13%)
Query: 10 KRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELG 69
K+ IDW + + D+VP EL + + PTP SDD +L + D++L
Sbjct: 16 KKDFVIDWSSAM-DKEDEVP-ELEIVNTTKPTPPPPPTFFSDDQTDSPKL---LTDRDLD 70
Query: 70 VRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGA----------------- 112
++ R K + + LPDKG+KI + LE+E +RR L G+
Sbjct: 71 EQLERKKAILT-LGPGLPDKGEKIRLKIADLEEEKQRRVLEGSKMEVDRSSKVVSSTSSG 129
Query: 113 ---VPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAF 169
+P + + S D Q + S+S+F++VF + D + AF
Sbjct: 130 SDVLPQGNAVSKDTSRGNADSKDTSRQGNADSKEVSRSTFSAVFSKP---KTDSQSKKAF 186
Query: 170 DKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKW--------------PFHKGDKSFN 215
KEL L C+RRK ++ GR+ V S W F G K
Sbjct: 187 GKELEDLG-CERRKHKA-------GRKPVTRLSNGWRLLPDVGKAEHSAKQFDSGLKESK 238
Query: 216 SNGSQKDRASLTCPSHQSG---------------ENSSSCLPKKKESFEVLPSKNPRLRK 260
N K+ P S ++S ++ S+E PS++ R RK
Sbjct: 239 GNKKSKEPYGKKRPMESSTYSLIDDDDDDDDDDDNDTSGHETPREWSWEKSPSQSSRRRK 298
Query: 261 EQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICY 320
+ +++ DE EE++ S EQA E E + + I YP+R DP V++C
Sbjct: 299 KSEDTVINVDE-------EEAQPST---VAEQAAELPEGLQE-DICYPTRDDPHFVQVCL 347
Query: 321 TDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDK 380
D+ LAP YLTSP+MNFY+R+LQ Q S +N+ DCHFFNTYFY KL +AV++KG DK
Sbjct: 348 KDLECLAPREYLTSPVMNFYMRFLQQQISSSNQISADCHFFNTYFYKKLSDAVTYKGNDK 407
Query: 381 DSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHC 440
D+FF++FRRWWKG+++F+K+Y+ IPIHED+HWSLVI+CIPDK+DESG ILHLDSL LH
Sbjct: 408 DAFFVRFRRWWKGIDLFRKAYIFIPIHEDLHWSLVIVCIPDKKDESGLTILHLDSLGLHS 467
Query: 441 SLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGL 500
SI N++ FLK+EWNYL Q+ DLPI+E++W++LPRRI + ++ VPQQKND+DCG
Sbjct: 468 RKSIVENVKRFLKDEWNYLNQDDYSLDLPISEKVWKNLPRRISEAVVQVPQQKNDFDCGP 527
Query: 501 FVLFFMERFMEEAPERLKKKDLAM 524
FVLFF++RF+EEAP+RLK+KDL M
Sbjct: 528 FVLFFIKRFIEEAPQRLKRKDLGM 551
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana
GN=ULP1C PE=1 SV=1
Length = 571
Score = 311 bits (797), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 210/569 (36%), Positives = 297/569 (52%), Gaps = 96/569 (16%)
Query: 10 KRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELD---RQIPDQ 66
K LNIDW++ L +++VP I+ A +P + SG E R + D
Sbjct: 14 KTMLNIDWDDALG--DEEVPELEII--------ATDKIPPREPTLSGYEPAVSVRSLRDN 63
Query: 67 ELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLT 126
EL + R + +++ L DKG+KI + LE E +RR + +GC L
Sbjct: 64 ELDDHLKRQRSLLTRLGDKLADKGEKIRNRIGELEYEKQRRMFQQRTKMQDADNGCQILE 123
Query: 127 QSPSSDCFT-----------QRTPSPQIQSKSSFTSVFREKM------------------ 157
+ SSD F Q T + S+S+F + F + +
Sbjct: 124 KPKSSDVFMRASTASKDTSGQGTSGSKDVSRSTFAAHFSDNLKMGPQPVKLVNDKLQDLG 183
Query: 158 ------EENRD-CREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKG 210
+ NRD E N + L L+ C + +N S S+ KG
Sbjct: 184 RGSWISKANRDSIIEKNNVWRSLPRLSKC------------KVSLKNFYSESKD---PKG 228
Query: 211 DKSFN-SNGSQKDRAS----LTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQN-- 263
D+ N + G K S L + + S + P ++ RK+ +
Sbjct: 229 DRRPNEAYGKGKPNESSPYLLVDDDDGDDDKVIGYETPRHWSLKASPLQSSSCRKKSDDK 288
Query: 264 LVLLDEDE--SP--VEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPES---V 316
++ LDEDE SP VE+A E EG + IYYPS + V
Sbjct: 289 VINLDEDEPLSPMVVEEACELPEG-----------------LPEDIYYPSSDQSDGRDLV 331
Query: 317 EICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHK 376
++ D+ L+P YLTSP++NFYIRY+Q ++ +CHFFNT+FY KL EAVS+K
Sbjct: 332 QVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANCHFFNTFFYKKLTEAVSYK 391
Query: 377 GGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSL 436
G D+D++F+KFRRWWKG ++F KSY+ IPIHED+HWSLVIICIPDKEDESG I+HLDSL
Sbjct: 392 GNDRDAYFVKFRRWWKGFDLFCKSYIFIPIHEDLHWSLVIICIPDKEDESGLTIIHLDSL 451
Query: 437 KLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDY 496
LH IF+N++ FL+EEWNYL Q+ +P DLPI+ ++W+ LP I++ + VPQQKND+
Sbjct: 452 GLHPRNLIFNNVKRFLREEWNYLNQD-APLDLPISAKVWRDLPNMINEAEVQVPQQKNDF 510
Query: 497 DCGLFVLFFMERFMEEAPERLKKKDLAMV 525
DCGLF+LFF+ RF+EEAP+RL +DL M+
Sbjct: 511 DCGLFLLFFIRRFIEEAPQRLTLQDLKMI 539
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis
thaliana GN=ULP2B PE=2 SV=3
Length = 931
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 114/221 (51%), Gaps = 22/221 (9%)
Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 364
+ YP + DP++V IC D+ L P ++ I++FYI YL+ Q + +
Sbjct: 384 VVYP-KGDPDAVSICKRDVELLQPETFVNDTIIDFYINYLKNQIQTEEKHRFHFFNSFFF 442
Query: 365 FYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDK-- 422
+ D + F++ R+W + V++F K Y+ +P++ ++HWSL++IC P +
Sbjct: 443 RKLADLDKDPSSIADGKAAFLRVRKWTRKVDMFGKDYIFVPVNYNLHWSLIVICHPGEVA 502
Query: 423 --------EDESGPIILHLDSLK-LHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAER 473
+ + P ILH+DS+K H L ++++L EEW +E S I+ R
Sbjct: 503 NRTDLDLDDSKKVPCILHMDSIKGSHAGLKNL--VQTYLCEEWKERHKETSDD---ISSR 557
Query: 474 IWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAP 514
R + + +PQQ+N +DCGLF+L ++E F+ EAP
Sbjct: 558 FMN--LRFVS---LELPQQENSFDCGLFLLHYLELFLAEAP 593
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis
thaliana GN=ULP2A PE=2 SV=2
Length = 774
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 125/241 (51%), Gaps = 25/241 (10%)
Query: 285 LHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYL 344
L T AD F + + YP + +P++V + DI L P ++ I++FYI+YL
Sbjct: 281 LGTSLTNLADSFED------LVYP-QGEPDAVVVRKQDIELLKPRRFINDTIIDFYIKYL 333
Query: 345 QLQASPTNRA-IRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVL 403
+ + SP R + F + L + G ++++ + ++W K V++F+K Y+
Sbjct: 334 KNRISPKERGRFHFFNCFFFRKLANLDKGTPSTCGGREAY-QRVQKWTKNVDLFEKDYIF 392
Query: 404 IPIHEDVHWSLVIICIPD-------KEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEW 456
IPI+ HWSLVIIC P + + P ILHLDS+K + + S+L+EEW
Sbjct: 393 IPINCSFHWSLVIICHPGELVPSHVENPQRVPCILHLDSIKGSHKGGLINIFPSYLREEW 452
Query: 457 NYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPER 516
+ E + +D A + Q + + +PQQ+N +DCGLF+L +++ F+ +AP +
Sbjct: 453 K-ARHENTTNDSSRAPNM-QSIS-------LELPQQENSFDCGLFLLHYLDLFVAQAPAK 503
Query: 517 L 517
Sbjct: 504 F 504
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2
Length = 638
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 42/231 (18%)
Query: 315 SVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAI-RDCHFFNTYFYSKLKEA- 372
S+ I TD+ L +L I++FY+RYL + N ++ D H FNT+FY++L
Sbjct: 346 SIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLANDTHIFNTFFYNRLTSKD 405
Query: 373 -----VSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIIC-------IP 420
+ H+G R+W + V++F K Y+++PI+E HW L IIC +
Sbjct: 406 KDGKRLGHRG---------VRKWTQKVDLFHKKYIIVPINETFHWYLAIICNIDRLMPVD 456
Query: 421 DKEDESGPIIL------------HLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDL 468
K +E I++ + ++ IF ++ + K NYL++ +
Sbjct: 457 TKLEEQDEIVMSSVEQPSASKTRQAELTSNSPAILIFDSLANLHKGALNYLREYLLEEAF 516
Query: 469 PIAERIWQHLPRRIDDRII--PVPQQKNDYDCGLFVLFFMERFMEEAPERL 517
ER HL + D R VPQQ N DCG++ L F+E F+ E PE++
Sbjct: 517 ---ERKNVHL-KSTDIRGFHAKVPQQSNFSDCGIYALHFVELFL-ETPEQV 562
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3
Length = 755
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 322 DINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKD 381
D+ L +L ++N Y L + A P HFFN++F+ +L KG
Sbjct: 573 DLATLDGQNWLNDQVINMYGE-LIMDAVPDK-----VHFFNSFFHRQLVT----KG---- 618
Query: 382 SFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCS 441
+ +RW K V++F+KS +LIPIH +VHWSL+ + + ++ II DS +H
Sbjct: 619 --YNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNR------IISFYDSQGIHFK 670
Query: 442 LSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLF 501
+ NIR YL E + P + WQ + +PQQKND DCG+F
Sbjct: 671 FCV-ENIR-------KYLLTEAREKNRPEFLQGWQTAVTKC------IPQQKNDSDCGVF 716
Query: 502 VLFFMERFMEEAPERLKKKDLAMVLPAITNRTC 534
VL + + E P + ++D+ V I C
Sbjct: 717 VLQYCKCLALEQPFQFSQEDMPRVRKRIYKELC 749
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2
SV=1
Length = 755
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 322 DINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKD 381
D+ L +L ++N Y L + A P HFFN++F+ +L KG
Sbjct: 573 DLATLDGQNWLNDQVINMYGE-LIMDAVPDK-----VHFFNSFFHRQLVT----KG---- 618
Query: 382 SFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCS 441
+ +RW K V++F+KS +LIPIH +VHWSL+ + + ++ II DS +H
Sbjct: 619 --YNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNR------IISFYDSQGIHFK 670
Query: 442 LSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLF 501
+ NIR YL E + P + WQ + +PQQKND DCG+F
Sbjct: 671 FCV-ENIR-------KYLLTEAREKNRPEFLQGWQTAVTKC------IPQQKNDSDCGVF 716
Query: 502 VLFFMERFMEEAPERLKKKDLAMVLPAITNRTC 534
VL + + E P + ++D+ V I C
Sbjct: 717 VLQYCKCLALEQPFQFSQEDMPRVRKRIYKELC 749
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1
Length = 749
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 36/213 (16%)
Query: 322 DINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKD 381
D+ L +L ++N Y L + A P HFFN++F+ +L KG
Sbjct: 567 DLATLDGQNWLNDQVINMYGE-LIMDAVPDK-----VHFFNSFFHRQLVT----KG---- 612
Query: 382 SFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCS 441
+ +RW K V++F+KS +LIPIH +VHWSL+ + + S II DS +H
Sbjct: 613 --YNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTL------SSRIISFYDSQGIHFK 664
Query: 442 LSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLF 501
+ NIR YL E + P + WQ + +PQQKND DCG+F
Sbjct: 665 FCV-ENIR-------KYLLTEAREKNRPEFLQGWQTAVTKC------IPQQKNDSDCGVF 710
Query: 502 VLFFMERFMEEAPERLKKKDLAMVLPAITNRTC 534
VL + + E P + ++D+ V I C
Sbjct: 711 VLQYCKCLALEQPFQFSQEDMPRVRKRIYKELC 743
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana
GN=ESD4 PE=1 SV=1
Length = 489
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 30/199 (15%)
Query: 315 SVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVS 374
+++I + L P+A+L ++N Y+ L+ + + + CH+FNT+FY KL VS
Sbjct: 287 NIDITGEVLQCLTPSAWLNDEVINVYLELLKERETREPKKYLKCHYFNTFFYKKL---VS 343
Query: 375 HKGGDKDSFFIKFRRWWK----GVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPII 430
G + F RRW G + + +PIH VHW+L + I ++E + +
Sbjct: 344 DSGYN----FKAVRRWTTQRKLGYALIDCDMIFVPIHRGVHWTLAV--INNRESK----L 393
Query: 431 LHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVP 490
L+LDSL I + + ++ +E N S I W + + +P
Sbjct: 394 LYLDSLN-GVDPMILNALAKYMGDEAN------EKSGKKIDANSWDM------EFVEDLP 440
Query: 491 QQKNDYDCGLFVLFFMERF 509
QQKN YDCG+F+L +++ F
Sbjct: 441 QQKNGYDCGMFMLKYIDFF 459
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3
Length = 589
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 41/205 (20%)
Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYL----QLQASPTNRAIRDCHFFNTYFYSKLKE 371
+ I DI L +L ++NFY+ L + Q P H F+T+FY KLK
Sbjct: 395 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPA------LHVFSTFFYPKLKS 448
Query: 372 AVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIIL 431
GG + +RW KGVN+F++ +L+PIH VHWSLV+I + K +
Sbjct: 449 -----GG-----YQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVIDLRKK------CLK 492
Query: 432 HLDSL--KLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPV 489
+LDS+ K H I + +L++E + SDL + E W H + + +
Sbjct: 493 YLDSMGQKGH---RICEILLQYLQDE----SKTKRNSDLNLLE--WTHHSMKPHE----I 539
Query: 490 PQQKNDYDCGLFVLFFMERFMEEAP 514
PQQ N DCG+F + + + P
Sbjct: 540 PQQLNGSDCGMFTCKYADYISRDKP 564
>sp|Q5R7K7|SENP2_PONAB Sentrin-specific protease 2 OS=Pongo abelii GN=SENP2 PE=2 SV=1
Length = 589
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 41/205 (20%)
Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYL----QLQASPTNRAIRDCHFFNTYFYSKLKE 371
+ I DI L +L ++NFY+ L + Q P H F+T+FY KLK
Sbjct: 395 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPA------LHVFSTFFYPKLKS 448
Query: 372 AVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIIL 431
GG + +RW KGVN+F++ +L+PIH VHWSLV+I + K +
Sbjct: 449 -----GG-----YQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVIDLRKK------CLK 492
Query: 432 HLDSL--KLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPV 489
+LDS+ K H I + +L++E + K+ + DL + E W H + + +
Sbjct: 493 YLDSMGQKGH---RICEILLQYLQDE-SKTKRNI---DLNLLE--WTHYSMKPHE----I 539
Query: 490 PQQKNDYDCGLFVLFFMERFMEEAP 514
PQQ N DCG+F + + + P
Sbjct: 540 PQQLNGSDCGMFTCKYADYISRDKP 564
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2
Length = 588
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
+ I DI L +L ++NFY+ L ++ + H F+T+FY KLK
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERSK--KQGYPALHAFSTFFYPKLKS---- 447
Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 435
GG + +RW KGVN+F++ VL+PIH VHWSLV++ + K + +LDS
Sbjct: 448 -GG-----YQAVKRWTKGVNLFEQELVLVPIHRKVHWSLVVMDLRKK------CLKYLDS 495
Query: 436 L--KLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQK 493
+ K H I + +L++E + +DL + E W H + + +PQQ
Sbjct: 496 MGQKGH---RICEILLQYLQDESKTKRN----TDLNLLE--WTHYSMKPHE----IPQQL 542
Query: 494 NDYDCGLFVLFFMERFMEEAP 514
N DCG+F + + + P
Sbjct: 543 NGSDCGMFTCKYADYISRDKP 563
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1
Length = 1047
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 106/273 (38%), Gaps = 80/273 (29%)
Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 364
I YP + + D+ L +L I++FY++YL L+ + ++ + H F+++
Sbjct: 746 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKA-SDELVERSHIFSSF 804
Query: 365 FYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHEDVHWSLVIIC 418
FY L ++ D + + RR W + +NIF K Y+ +P++E HW L +IC
Sbjct: 805 FYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVIC 864
Query: 419 IP------------------------------------------DKEDESGP-------- 428
P ED P
Sbjct: 865 FPWLEEVVYEDFPQTIPQYSQAEESHHDSRTIDNDLHTSSALSSGTEDSQSPEMNVTVPK 924
Query: 429 ------IILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQ---EVSPSDLPIAERIWQHLP 479
IL LDSLK + N+R +L+ EW ++ E S +++
Sbjct: 925 KMCKRPCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMV---------- 974
Query: 480 RRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEE 512
D VP+Q N DCG+++L ++E F ++
Sbjct: 975 ----DLCPKVPKQDNSSDCGVYLLQYVESFFKD 1003
>sp|Q9EQE1|SENP2_RAT Sentrin-specific protease 2 OS=Rattus norvegicus GN=Senp2 PE=1 SV=1
Length = 588
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 33/201 (16%)
Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
+ I DI L +L ++NFY+ L ++ + H +T+FY KLK
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERSK--KQGYPALHALSTFFYPKLKS---- 447
Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 435
GG + +RW KGVN+F + VL+PIH VHWSLV++ + K + +LDS
Sbjct: 448 -GG-----YQAVKRWTKGVNLFDQELVLVPIHRKVHWSLVVMDLRKK------CLKYLDS 495
Query: 436 L--KLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQK 493
+ K H I + +L++E + +DL + E W H + + +PQQ
Sbjct: 496 MGQKGH---RICEILLQYLQDESKTKRN----TDLNLLE--WTHYSMKPHE----IPQQL 542
Query: 494 NDYDCGLFVLFFMERFMEEAP 514
N DCG+F + + + P
Sbjct: 543 NGSDCGMFTCKYADYISRDKP 563
>sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis
thaliana GN=ULP1B PE=5 SV=2
Length = 341
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 29/212 (13%)
Query: 315 SVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVS 374
+++I + L P +L + N Y+ L+ + + + CHFFNT+FY KL VS
Sbjct: 138 NIDISGETLQCLRPNQWLNDDVTNLYLELLKERQTRDPQKYFKCHFFNTFFYVKL---VS 194
Query: 375 HKGGDKDSFFIKFRRWWK----GVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPII 430
G + + RW G ++ + +PIH D+HW+L +I +++
Sbjct: 195 GSGYN----YKAVSRWTTKRKLGYDLIDCDIIFVPIHIDIHWTLGVINNRERK------F 244
Query: 431 LHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVP 490
++LDSL +I + + +L +E +KQ+ S ++ ++ +++ R P
Sbjct: 245 VYLDSLFTGVGHTILNAMAKYLVDE---VKQK-SQKNIDVSSWGMEYVEER--------P 292
Query: 491 QQKNDYDCGLFVLFFMERFMEEAPERLKKKDL 522
QQ+N YDCG+F+L +++ + + +KD+
Sbjct: 293 QQQNGYDCGMFMLKYIDFYSRGLSLQFSQKDM 324
>sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A OS=Arabidopsis thaliana
GN=ULP1A PE=2 SV=2
Length = 502
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 184/433 (42%), Gaps = 81/433 (18%)
Query: 113 VPVCLDIDGCDKLTQSPSSDCF-TQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDK 171
PV + G D+ T+ S + T T + + +++ S R + + RE D
Sbjct: 85 APVRILNSGRDRSTRQGSGNVLGTFLTRNNDMWKRNALDSSLRYRTD-----REVIDVDD 139
Query: 172 ELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSH 231
EL + +M SD D S+ G +NV + +K+ NG + ASL S
Sbjct: 140 ELGDV------EMISD-DTSREGVENVAMEVDEVE----EKAEMGNGLFSEVASLKNGSL 188
Query: 232 QSGE----NSSSCLPKK----KESFE----VLPSKNPRLRKEQNLVLLD----------- 268
+ GE NSSS + + SFE VL S R K ++ +D
Sbjct: 189 RVGECSKANSSSLVVNRPVTDVTSFEAYRKVLESAVNRTSKLKDRGFVDFFKERGRALLR 248
Query: 269 -------EDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYT 321
+DE PVE E+ L E E A A D+ I + +++I
Sbjct: 249 SLSSFWRQDEEPVEVVQREAFVPLSREE-ETAVRRAFSANDSNILVTHK--NSNIDITGK 305
Query: 322 DINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKL-KEAVSHKGGDK 380
+ L P +L ++N Y+ L+ + + + CHFFNT+F++KL A + G
Sbjct: 306 ILRCLKPGKWLNDEVINLYMVLLKEREAREPKKFLKCHFFNTFFFTKLVNSATGYNYG-- 363
Query: 381 DSFFIKFRRWWK----GVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSL 436
RRW G ++ + IPIH ++HW+L +I I D++ + +LDS
Sbjct: 364 -----AVRRWTSMKRLGYHLKDCDKIFIPIHMNIHWTLAVINIKDQKFQ------YLDSF 412
Query: 437 KLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDY 496
K + + R F+ E ++ S DL ++ W+ + + +P Q+N +
Sbjct: 413 KGREPKILDALARYFVDE-----VRDKSEVDLDVSR--WRQ------EFVQDLPMQRNGF 459
Query: 497 DCGLFVLFFMERF 509
DCG+F++ +++ +
Sbjct: 460 DCGMFMVKYIDFY 472
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 125/295 (42%), Gaps = 56/295 (18%)
Query: 250 VLPSKNPRLRKEQNLVLLD---------EDESPVEDASEESEGSLHIETTEQADEFAECM 300
L +N RL+++++ VL E E PV A E + S + T+ DEF E
Sbjct: 363 ALQLQNQRLQEQEHAVLDSVELHLRVPLEKEIPVTAAQETRKKSHQL--TDSEDEFPEIT 420
Query: 301 --IDAKIYYPSR------VDPESVEICYT--DINHLAPAAYLTSPIMNFYIRYLQLQASP 350
++ +I R V E+ + T DI L +L I+NFY+ L ++
Sbjct: 421 EEMEKEIKNVFRNGNQDEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLMERSK- 479
Query: 351 TNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDV 410
+ H FNT+F++KLK A + +RW K V++F +L+PIH V
Sbjct: 480 -EKGFPSVHAFNTFFFTKLKTAG----------YQAVKRWTKKVDVFSVDILLVPIHLGV 528
Query: 411 HWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSN--IRSFLKEEWNYLKQE-VSPSD 467
HW L ++ K S+ + S+ +N R L+ YLKQE V
Sbjct: 529 HWCLAVVDFRRK------------SITYYDSMGGINNEACRILLQ----YLKQESVDKKR 572
Query: 468 LPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDL 522
WQ ++ + +PQQ N DCG+F + + ++ P ++ +
Sbjct: 573 KEFDTNGWQLFSKKSQE----IPQQMNGSDCGMFACKYADCITKDRPINFTQQHM 623
>sp|Q09353|SENP_CAEEL Sentrin-specific protease OS=Caenorhabditis elegans GN=ulp-1 PE=2
SV=3
Length = 697
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 36/226 (15%)
Query: 311 VDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLK 370
VD S++IC D+ L+ +L I+NFY++ + +++ ++ + + FNT+FYS
Sbjct: 496 VDAFSIQICKKDLATLSGLHWLNDEIINFYLQLICDRSNGDSKYPK-IYAFNTFFYSN-- 552
Query: 371 EAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPII 430
+ KG + +RW + V+IF VL+P+H +HW + +I + +K+ I
Sbjct: 553 --IVSKG------YASVKRWTRKVDIFAFDIVLVPVHLGMHWCMAVIDMGEKK------I 598
Query: 431 LHLDSLKLHCSLSIFSNIRSFLK-EEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPV 489
DSL + ++ +R +L+ E + K ++ S I + + +
Sbjct: 599 EFYDSL-YDGNTAVLPALRGYLEAESLDKKKTAMNFSGWTIQQ-------------MTDI 644
Query: 490 PQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMVLPAITNRTCY 535
P+Q+N DCG+F F E R +K+ +P R Y
Sbjct: 645 PRQQNGSDCGVFSCQFGEWASRRTTPRFTQKN----MPYYRKRMVY 686
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4
Length = 1050
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 300 MIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCH 359
++ I YP + + D+ L +L I++FY++YL L+ + ++ + H
Sbjct: 744 LVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKA-SDELVERSH 802
Query: 360 FFNTYFYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHEDVHWS 413
F+++FY L ++ D + + RR W + +NIF K Y+ +P++E HW
Sbjct: 803 IFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWY 862
Query: 414 LVIICIP 420
L +IC P
Sbjct: 863 LAVICFP 869
Score = 39.3 bits (90), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
Query: 428 PIILHLDSLKLHCSLSIFSNIRSFLKEEWNY-LKQEVSPSDLPIAERIWQHLPRRIDDRI 486
P IL LDSLK + N+R +L+ EW LK Q + D
Sbjct: 933 PCILILDSLKAASVQNTVQNLREYLEVEWEVKLKTHR------------QFSKTNMVDLC 980
Query: 487 IPVPQQKNDYDCGLFVLFFMERFMEE 512
VP+Q N DCG+++L ++E F ++
Sbjct: 981 PKVPKQDNSSDCGVYLLQYVESFFKD 1006
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 364
I YP + + D+ L +L I++FY++YL L+ + ++ + H F+++
Sbjct: 736 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKA-SDELVERSHIFSSF 794
Query: 365 FYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHEDVHWSLVIIC 418
FY L ++ D + RR W + +NIF K Y+ +P++E HW L +IC
Sbjct: 795 FYKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVIC 854
Query: 419 IP 420
P
Sbjct: 855 FP 856
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 428 PIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQ---EVSPSDLPIAERIWQHLPRRIDD 484
P IL LDSLK + N+R +L+ EW ++ E S +++ D
Sbjct: 920 PCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMV--------------D 965
Query: 485 RIIPVPQQKNDYDCGLFVLFFMERFMEE 512
VP+Q N DCG+++L ++E F ++
Sbjct: 966 LCPKVPKQDNSSDCGVYLLQYVESFFQD 993
>sp|Q9EP97|SENP3_MOUSE Sentrin-specific protease 3 OS=Mus musculus GN=Senp3 PE=1 SV=1
Length = 568
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 96/231 (41%), Gaps = 36/231 (15%)
Query: 310 RVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKL 369
RV + + D+ L +L +MN Y L + P HFFN++FY KL
Sbjct: 374 RVSYKRHVLTMDDLGTLYGQNWLNDQVMNMYGD-LVMDTVPEK-----VHFFNSFFYDKL 427
Query: 370 KEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPI 429
+ KG D +RW K V+IF K +LIPIH +VHWSL+ + + +
Sbjct: 428 RT----KGYDG------VKRWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRR------T 471
Query: 430 ILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPV 489
I + DS + + R K YL+ E D + W+ + + V
Sbjct: 472 ITYFDSQR--------TLNRRCPKHIAKYLQAEAVKKDRLDFHQGWKGYFK------MNV 517
Query: 490 PQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMVLPAITNRTCYVSYVI 540
+Q ND DCG FVL + + P ++D+ + I C+ +
Sbjct: 518 ARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPKLRRQIYKELCHCKLTV 568
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 364
I YP + + D+ L +L I++FY++YL L+ + ++ + H F+++
Sbjct: 736 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKA-SDELVERSHIFSSF 794
Query: 365 FYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHEDVHWSLVIIC 418
FY L ++ D + RR W + +NIF K Y+ +P++E HW L +IC
Sbjct: 795 FYKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVIC 854
Query: 419 IP 420
P
Sbjct: 855 FP 856
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 18/108 (16%)
Query: 408 EDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQ---EVS 464
ED + V + +P K + P IL LDSLK + N+R +L+ EW ++ E S
Sbjct: 901 EDSQSTEVNMSVPKKMCKR-PCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFS 959
Query: 465 PSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEE 512
+++ D VP+Q N DCG+++L ++E F ++
Sbjct: 960 KTNMV--------------DLCPKVPKQDNSSDCGVYLLQYVESFFQD 993
>sp|Q9H4L4|SENP3_HUMAN Sentrin-specific protease 3 OS=Homo sapiens GN=SENP3 PE=1 SV=2
Length = 574
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 36/219 (16%)
Query: 322 DINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKD 381
D+ L +L +MN Y L + P HFFN++FY KL+ KG D
Sbjct: 392 DLGTLYGQNWLNDQVMNMYGD-LVMDTVPEK-----VHFFNSFFYDKLRT----KGYDG- 440
Query: 382 SFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCS 441
+RW K V+IF K +LIPIH +VHWSL+ + + + I + DS +
Sbjct: 441 -----VKRWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRR------TITYFDSQR---- 485
Query: 442 LSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLF 501
+ R K YL+ E D + W+ + + V +Q ND DCG F
Sbjct: 486 ----TLNRRCPKHIAKYLQAEAVKKDRLDFHQGWKGYFK------MNVARQNNDSDCGAF 535
Query: 502 VLFFMERFMEEAPERLKKKDLAMVLPAITNRTCYVSYVI 540
VL + + P ++D+ + I C+ +
Sbjct: 536 VLQYCKHLALSQPFSFTQQDMPKLRRQIYKELCHCKLTV 574
>sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2
Length = 644
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 31/200 (15%)
Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
+ I DI L +L I+NFY+ L ++ + + H FNT+F++KLK A
Sbjct: 450 LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSK--EKGLPSVHAFNTFFFTKLKTAG-- 505
Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 435
+ +RW K V++F +L+PIH VHW L ++ K I + DS
Sbjct: 506 --------YQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKN------ITYYDS 551
Query: 436 LKLHCSLSIFSNIRSFLKEEWNYLKQE-VSPSDLPIAERIWQHLPRRIDDRIIPVPQQKN 494
+ I + L + YLKQE + WQ ++ + +PQQ N
Sbjct: 552 MG-----GINNEACRILLQ---YLKQESIDKKRKEFDTNGWQLFSKKSQE----IPQQMN 599
Query: 495 DYDCGLFVLFFMERFMEEAP 514
DCG+F + + ++ P
Sbjct: 600 GSDCGMFACKYADCITKDRP 619
>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii GN=SENP1 PE=2 SV=1
Length = 645
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 31/200 (15%)
Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 375
+ I DI L +L I+NFY+ L ++ + + H FNT+F++KLK A
Sbjct: 451 LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSK--EKGLPSVHAFNTFFFTKLKTAG-- 506
Query: 376 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 435
+ +RW K V++F +L+PIH VHW L ++ K I + DS
Sbjct: 507 --------YQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKN------ITYYDS 552
Query: 436 LKLHCSLSIFSNIRSFLKEEWNYLKQE-VSPSDLPIAERIWQHLPRRIDDRIIPVPQQKN 494
+ I + L + YLKQE + WQ ++ + +PQQ N
Sbjct: 553 MG-----GINNEACRILLQ---YLKQESIDKKRKEFDTNGWQLFSKKSQE----IPQQMN 600
Query: 495 DYDCGLFVLFFMERFMEEAP 514
DCG+F + + ++ P
Sbjct: 601 GSDCGMFACKYADCITKDRP 620
>sp|Q6P7W0|SENP6_MOUSE Sentrin-specific protease 6 OS=Mus musculus GN=Senp6 PE=1 SV=3
Length = 1132
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 257 RLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESV 316
+LR +Q L D+DE E + + I E+ I YP +
Sbjct: 644 QLRSKQELQFFDDDEEAGESHT------IFIGPVEKL-----------IVYPPPPAKGGI 686
Query: 317 EICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHK 376
+ D++ L+ +L I++FY++YL L+ A R H F+++FY +L + +
Sbjct: 687 SVTNEDLHCLSEGEFLNDVIIDFYLKYLVLEKLKKEDADR-IHIFSSFFYKRLNQR-ERR 744
Query: 377 GGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKE 423
+ + I+ +R W + V+IF+K ++ +P++E HW L ++C P E
Sbjct: 745 NPETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHWFLAVVCFPGLE 797
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 428 PIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRII 487
P IL +DSL+ ++ +R +L+ EW K S ++ + + +
Sbjct: 990 PCILLMDSLRGPSRSNVVKILREYLEVEWEVKKG----SKRSFSKDVMKGSNPK------ 1039
Query: 488 PVPQQKNDYDCGLFVLFFMERFME 511
VPQQ N DCG++VL ++E F E
Sbjct: 1040 -VPQQNNFSDCGVYVLQYVESFFE 1062
>sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2
Length = 1112
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 301 IDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHF 360
++ I YP + + D++ L +L I++FY++YL L+ A R H
Sbjct: 651 VEKLIVYPPPPAKGGISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLKKEDADR-IHI 709
Query: 361 FNTYFYSKL--KEAVSHKGGD---KDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLV 415
F+++FY +L +E +H+ + + + + W + V+IF+K ++ +P++E HW L
Sbjct: 710 FSSFFYKRLNQRERRNHETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHWFLA 769
Query: 416 IICIPDKE 423
++C P E
Sbjct: 770 VVCFPGLE 777
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 428 PIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRII 487
P IL +DSL+ ++ +R +L+ EW K S ++ + + +
Sbjct: 971 PCILLMDSLRGPSRSNVVKILREYLEVEWEVKKG----SKRSFSKDVMKGSNPK------ 1020
Query: 488 PVPQQKNDYDCGLFVLFFMERFME 511
VPQQ N DCG++VL ++E F E
Sbjct: 1021 -VPQQNNFSDCGVYVLQYVESFFE 1043
>sp|O42957|ULP1_SCHPO Ubiquitin-like-specific protease 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp1 PE=3 SV=1
Length = 568
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 315 SVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVS 374
++ I D++ L +L ++NFY+ + + S + ++ H FNT+FY+ L+
Sbjct: 376 NIPITLKDLHTLRNRQWLNDEVINFYMNLIS-ERSKIDSSLPRVHGFNTFFYTSLQR--- 431
Query: 375 HKGGDKDSFFIKFRRWWKG--VNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILH 432
+G + RRW K VNI V IP+H DVHW + +I K E +
Sbjct: 432 -RG------YAGVRRWAKKARVNIADMDAVFIPVHLDVHWCMAVINKSKKRFE------Y 478
Query: 433 LDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQ 492
DSL +F +R + E K V SD W++ +DD P+Q
Sbjct: 479 WDSLA-GSPGKVFDLLRDYYIAE---TKGAVDVSD-------WENF---MDDN---SPRQ 521
Query: 493 KNDYDCGLFVLFFMERFMEEAPERLKKKDL 522
+N +DCG+F E P + + D+
Sbjct: 522 RNGHDCGVFACKTAECVSRNVPVQFSQNDM 551
>sp|Q09275|ULP4_CAEEL Putative thiol protease ulp-4 OS=Caenorhabditis elegans GN=ulp-4
PE=3 SV=2
Length = 382
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 401 YVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLK 460
Y+++P++E HWSL +IC P I + L+ ++ + I SF+K +
Sbjct: 225 YIVVPVNEWEHWSLAVICHPFTAQARTVIFDSQLTADLNNLQNMATLIESFMKYSYEKRT 284
Query: 461 QEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKK 520
P LP LP+R+ PQQ N++DCG+F+ F RF+ P+ L
Sbjct: 285 GNAMPFPLPCI------LPQRM-------PQQTNNFDCGIFIAEFARRFLLSPPKDLDNF 331
Query: 521 DLAMVLPAITNRT 533
D A P + T
Sbjct: 332 DFAREYPDFSTAT 344
>sp|P40537|ULP2_YEAST Ubiquitin-like-specific protease 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP2 PE=1 SV=1
Length = 1034
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 32/222 (14%)
Query: 312 DPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIR--DCHFFNTYFYSKL 369
D S I D L ++ I++F+ ++ +++S I+ H +++FY+KL
Sbjct: 438 DGSSYTITNQDFKCLFNKDWVNDSILDFFTKFY-IESSIEKSIIKREQVHLMSSFFYTKL 496
Query: 370 KEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDK-----ED 424
+S+ ++ ++W ++F K YV+IPI+ HW II D ++
Sbjct: 497 ---ISNPAD----YYSNVKKWVNNTDLFSKKYVVIPINISYHWFSCIITNLDAILDFHQN 549
Query: 425 ESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHL------ 478
+ ++ D + ++ L NI +F + L+Q S PI E + +
Sbjct: 550 KDKNDAINSDEISINNPL---VNILTF-----DSLRQTHSREIDPIKEFLISYALDKYSI 601
Query: 479 ---PRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERL 517
+I + PVPQQ N DCG+ V+ + +F E E +
Sbjct: 602 QLDKTQIKMKTCPVPQQPNMSDCGVHVILNIRKFFENPVETI 643
>sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP1 PE=1 SV=1
Length = 621
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 47/198 (23%)
Query: 311 VDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLK 370
++ +++EI D LAP +L I+ F+++Y++ +++P A FN++FY+ L
Sbjct: 428 MNRDNIEITVRDFKTLAPRRWLNDTIIEFFMKYIE-KSTPNTVA------FNSFFYTNLS 480
Query: 371 EAVSHKGGDKDSFFIKFRRWW--KGVNIFQKSYVLIPIH-EDVHWSLVIICIPDKEDESG 427
E ++G RRW K I + + PI+ HW+L II + K
Sbjct: 481 ER-GYQG---------VRRWMKRKKTQIDKLDKIFTPINLNQSHWALGIIDLKKK----- 525
Query: 428 PIILHLDSLKLH---CSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDD 484
I ++DSL S +I ++++ ++ EE + E D + HL
Sbjct: 526 -TIGYVDSLSNGPNAMSFAILTDLQKYVMEESKHTIGE----DFDLI-----HL------ 569
Query: 485 RIIPVPQQKNDYDCGLFV 502
PQQ N YDCG++V
Sbjct: 570 ---DCPQQPNGYDCGIYV 584
>sp|P30876|RPB2_HUMAN DNA-directed RNA polymerase II subunit RPB2 OS=Homo sapiens
GN=POLR2B PE=1 SV=1
Length = 1174
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 364
+YYP + + + Y L PA + + Y Y Q + NR+ D FF +
Sbjct: 751 LYYPQKPLVTTRSMEYLRFREL-PAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSV 809
Query: 365 FYSKLKEAVSHKGGDKDSFFIK 386
FY KE S KG D++ F K
Sbjct: 810 FYRSYKEQESKKGFDQEEVFEK 831
>sp|Q8CFI7|RPB2_MOUSE DNA-directed RNA polymerase II subunit RPB2 OS=Mus musculus
GN=Polr2b PE=2 SV=2
Length = 1174
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 305 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 364
+YYP + + + Y L PA + + Y Y Q + NR+ D FF +
Sbjct: 751 LYYPQKPLVTTRSMEYLRFREL-PAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSV 809
Query: 365 FYSKLKEAVSHKGGDKDSFFIK 386
FY KE S KG D++ F K
Sbjct: 810 FYRSYKEQESKKGFDQEEVFEK 831
>sp|P27884|CAC1A_RABIT Voltage-dependent P/Q-type calcium channel subunit alpha-1A
OS=Oryctolagus cuniculus GN=CACNA1A PE=1 SV=1
Length = 2424
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 76 KDTYSKVRHCLPDKGKKILATVTRLEKECERRR 108
+D YS HCLP +G+ A++ RL E +RRR
Sbjct: 2080 QDGYSDSEHCLPMEGQARAASMPRLPAENQRRR 2112
>sp|Q54XR2|SENP8_DICDI Probable sentrin-specific protease 8 OS=Dictyostelium discoideum
GN=senp8 PE=3 SV=1
Length = 243
Score = 33.1 bits (74), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 490 PQQKNDYDCGLFVLFFMERFME 511
PQQ+N YDCGL+VL +E ++
Sbjct: 166 PQQQNGYDCGLYVLSIIEELLK 187
>sp|Q9ZA21|HGPA_HAEIF Hemoglobin and hemoglobin-haptoglobin-binding protein A
OS=Haemophilus influenzae GN=hgpA PE=1 SV=1
Length = 1077
Score = 33.1 bits (74), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 157 MEENRDCREANAFDKELSILAHCDRRKMRSDG---------DLSQRGRQNVRSSSRKWPF 207
++ NRD + A KELS+ H D + + DLS +GR++V S+ PF
Sbjct: 832 IQPNRDLQPETAKTKELSLTVHNDMGYITTSVFDTRYQNFIDLSYQGRRDVHGHSKLIPF 891
Query: 208 H 208
H
Sbjct: 892 H 892
>sp|Q8C633|CABS1_MOUSE Calcium-binding and spermatid-specific protein 1 OS=Mus musculus
GN=Cabs1 PE=1 SV=1
Length = 391
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Query: 60 DRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDI 119
D IP E I D + V C PD TV +L E+ +L DI
Sbjct: 31 DNTIPKSE--TTITSEGDHVTSVNDCTPDG--DFSTTVNKLTPTKEKLKLED------DI 80
Query: 120 DGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVF 153
+GC KLT P + T T +P + K S T F
Sbjct: 81 EGCLKLTTLPEKE-ITTPTETPNSKPKGSITENF 113
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 213,758,384
Number of Sequences: 539616
Number of extensions: 9807319
Number of successful extensions: 24770
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 24597
Number of HSP's gapped (non-prelim): 162
length of query: 542
length of database: 191,569,459
effective HSP length: 122
effective length of query: 420
effective length of database: 125,736,307
effective search space: 52809248940
effective search space used: 52809248940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)