Query 009158
Match_columns 542
No_of_seqs 120 out of 138
Neff 3.6
Searched_HMMs 46136
Date Thu Mar 28 21:07:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009158.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009158hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04765 DUF616: Protein of un 100.0 1E-114 3E-119 872.2 28.1 304 145-458 1-305 (305)
2 cd04194 GT8_A4GalT_like A4GalT 94.4 0.069 1.5E-06 51.7 5.5 97 242-341 29-131 (248)
3 cd00505 Glyco_transf_8 Members 92.1 0.88 1.9E-05 44.5 9.1 160 242-433 29-200 (246)
4 PF01501 Glyco_transf_8: Glyco 90.2 0.47 1E-05 44.4 4.9 115 290-432 85-204 (250)
5 PF03407 Nucleotid_trans: Nucl 70.2 11 0.00023 35.9 5.8 90 303-434 66-156 (212)
6 cd06429 GT8_like_1 GT8_like_1 63.0 11 0.00025 38.2 4.8 96 242-340 28-148 (257)
7 cd02537 GT8_Glycogenin Glycoge 56.9 73 0.0016 31.4 9.1 53 273-326 53-112 (240)
8 PF15471 TMEM171: Transmembran 51.1 17 0.00037 38.4 3.7 34 66-99 205-238 (319)
9 cd06432 GT8_HUGT1_C_like The C 49.9 16 0.00034 36.8 3.2 44 295-340 86-130 (248)
10 PF03452 Anp1: Anp1; InterPro 49.5 14 0.00031 38.4 2.9 47 294-343 133-179 (269)
11 PLN02742 Probable galacturonos 48.2 25 0.00054 40.0 4.7 95 242-339 255-386 (534)
12 PF05637 Glyco_transf_34: gala 47.2 13 0.00029 37.2 2.3 44 388-432 143-192 (239)
13 cd06430 GT8_like_2 GT8_like_2 43.2 51 0.0011 34.9 5.9 34 294-327 87-120 (304)
14 PLN02718 Probable galacturonos 39.8 68 0.0015 37.1 6.5 96 242-340 341-452 (603)
15 PLN03181 glycosyltransferase; 39.7 35 0.00075 38.0 4.1 122 285-449 176-322 (453)
16 cd06431 GT8_LARGE_C LARGE cata 39.2 29 0.00063 35.7 3.3 99 241-340 28-135 (280)
17 PF03314 DUF273: Protein of un 30.1 41 0.00089 34.4 2.6 41 297-339 35-75 (222)
18 PLN02769 Probable galacturonos 23.1 1.6E+02 0.0034 34.5 5.8 49 289-339 431-485 (629)
19 cd02515 Glyco_transf_6 Glycosy 21.4 63 0.0014 34.0 2.2 114 199-321 18-141 (271)
No 1
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=100.00 E-value=1.4e-114 Score=872.25 Aligned_cols=304 Identities=59% Similarity=1.005 Sum_probs=297.2
Q ss_pred ceeeeecCCccccccCCCCCCCCCCChhhcccccccCCCeeeecccccCCCCCCCCccCChhhHHHHhccCcEEEEEeee
Q 009158 145 NLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIF 224 (542)
Q Consensus 145 ~l~Yi~~~~~~~~~~~~~~~FgG~~s~~~R~~sf~~~~~~~vhCGF~~g~pg~~~Gf~i~e~D~~~m~~CkkVVVYTAIF 224 (542)
||+||.+|+++. +.++++|||||||+||++||+++++|+|||||++ ||||||+|.|+.||++|+ ||||||||
T Consensus 1 nl~y~~~~~~~~--~~~~~~f~g~~s~~~R~~sf~~~~~~~v~Cgf~~-----~~gf~i~~~d~~~m~~c~-vvV~saIF 72 (305)
T PF04765_consen 1 NLTYIEEENKPE--SGRGPSFGGNQSLEERESSFDIQEDMTVHCGFVK-----NTGFDISESDRRYMEKCR-VVVYSAIF 72 (305)
T ss_pred CCcccccccccc--cCCCCCcCCcCCHHHHHHhcCCCCCceecccccc-----CCCCCCCHHHHHHHhcCC-EEEEEEec
Confidence 799999998765 7889999999999999999999999999999999 799999999999999999 99999999
Q ss_pred CCCcccCCCCCCCcccCCCeeEEEEechhhHHHHhhccCC-CCCccccceEEEEcCCCCCCCccccCCcceecccccCCC
Q 009158 225 GAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGL-DRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPN 303 (542)
Q Consensus 225 GnYD~L~qP~~Is~~s~~~VcFicFTDe~tl~~l~~~~~~-~~~~k~G~WrIV~V~~lpy~D~rRngRipKiLpHrLFPn 303 (542)
|+||+|+||++|++++.++|||+||||+.|+++|+++|.+ ++++++|+||||+|+++||+|+|||||+||||+|+||||
T Consensus 73 G~yD~l~qP~~i~~~s~~~vcf~mF~D~~t~~~l~~~~~~~~~~~~ig~WrIv~v~~lp~~d~rr~~r~~K~lpHrlfp~ 152 (305)
T PF04765_consen 73 GNYDKLRQPKNISEYSKKNVCFFMFVDEETLKSLESEGHIPDENKKIGIWRIVVVKNLPYDDPRRNGRIPKLLPHRLFPN 152 (305)
T ss_pred CCCccccCchhhCHHHhcCccEEEEEehhhHHHHHhcCCccccccccCceEEEEecCCCCcchhhcCcccceeccccCCC
Confidence 9999999999999999999999999999999999998865 888999999999999999999999999999999999999
Q ss_pred CCEEEEEeCceEEecCHHHHHHHHhhccCCeEEEecCCCCCCHHHHHHHHHHhccCChHHHHHHHHHHHHcCCCCcccCC
Q 009158 304 ARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAK 383 (542)
Q Consensus 304 yrYSIWIDgkIqL~~DP~~LLe~~Lwr~n~~~AIskHp~R~cVYEEAeac~r~~K~d~~~I~~Qme~Yr~eGLp~~s~~k 383 (542)
|+|||||||||+|++||++||+++||+++++|||++||.|+||||||+||++++||+.+.|++||++|+++|||+|+.+|
T Consensus 153 y~ySIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~~H~~R~cvyeEa~a~~~~~k~~~~~I~~Qm~~Y~~eGlp~~s~~k 232 (305)
T PF04765_consen 153 YDYSIWIDGKIQLIVDPLLLIERFLWRKNADIAISKHPERNCVYEEAEACKRLGKYDPERIDEQMEFYKQEGLPPWSPAK 232 (305)
T ss_pred CceEEEEeeeEEEecCHHHHHHHHHhcCCCcEEEeCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcceEEEcccCCchhHHHHHHHHHHhcCCCCCCchHHHHHhhhccCCCccccccccchhhhhhhhccc
Q 009158 384 LPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYH 458 (542)
Q Consensus 384 lP~~sgLpE~~VIIR~Htp~snlFmclWFnEv~rfS~RDQLSF~YVl~Kl~~~~~~~lnMF~dcerr~~v~~~~h 458 (542)
+|+.+|||||+||||+|++++|+|||+|||||++||+||||||+||+||+++ +|++|||+||||+++|++++|
T Consensus 233 ~~l~s~v~E~~iIiR~H~~~~nlf~clWfnEv~rfs~RDQLSF~Yv~wk~~~--~~~~~mf~~~~~~~~~~~~~h 305 (305)
T PF04765_consen 233 LPLPSDVPEGNIIIRKHNPMSNLFMCLWFNEVERFSPRDQLSFPYVLWKLGP--KFKLNMFKDCERRQLVVLYRH 305 (305)
T ss_pred cccccCCccceEEEecCCchhHHHHHHHHHHHhcCCCcccchHHHHHHHhCC--cccchhhhHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999998 599999999999999999998
No 2
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=94.43 E-value=0.069 Score=51.74 Aligned_cols=97 Identities=19% Similarity=0.219 Sum_probs=59.4
Q ss_pred CCeeEEEEechhhHHHHhhccCCCCCccccceEEEEcCCCCCCCcc-ccCC-----cceecccccCCCCCEEEEEeCceE
Q 009158 242 KTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDAR-RTGK-----IPKLLAHRLFPNARFSLWIDGKLE 315 (542)
Q Consensus 242 ~~VcFicFTDe~tl~~l~~~~~~~~~~k~G~WrIV~V~~lpy~D~r-RngR-----ipKiLpHrLFPnyrYSIWIDgkIq 315 (542)
..++|++++|+.+......-..+.... ....+++.++...+.+.. ...+ +.|++...+||+|+.-||||+-+.
T Consensus 29 ~~~~~~il~~~is~~~~~~L~~~~~~~-~~~i~~~~i~~~~~~~~~~~~~~~~~~~y~rl~l~~ll~~~~rvlylD~D~l 107 (248)
T cd04194 29 RDYDFYILNDDISEENKKKLKELLKKY-NSSIEFIKIDNDDFKFFPATTDHISYATYYRLLIPDLLPDYDKVLYLDADII 107 (248)
T ss_pred CceEEEEEeCCCCHHHHHHHHHHHHhc-CCeEEEEEcCHHHHhcCCcccccccHHHHHHHHHHHHhcccCEEEEEeCCEE
Confidence 478999999875443222111110000 123344544332121111 1222 348899999999999999999999
Q ss_pred EecCHHHHHHHHhhccCCeEEEecCC
Q 009158 316 LVVDPYQILERHLWRKNATFAISRHY 341 (542)
Q Consensus 316 L~~DP~~LLe~~Lwr~n~~~AIskHp 341 (542)
+.+|+..|.+.-+ ++..+|+..|.
T Consensus 108 v~~di~~L~~~~~--~~~~~aa~~d~ 131 (248)
T cd04194 108 VLGDLSELFDIDL--GDNLLAAVRDP 131 (248)
T ss_pred ecCCHHHHhcCCc--CCCEEEEEecc
Confidence 9999999987544 56778887764
No 3
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=92.10 E-value=0.88 Score=44.47 Aligned_cols=160 Identities=13% Similarity=0.191 Sum_probs=93.0
Q ss_pred CCeeEEEEechhhHHHHhhccCCCCCccccceEEEEcCCCCCC------CccccCCcceecccccCCCCCEEEEEeCceE
Q 009158 242 KTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYS------DARRTGKIPKLLAHRLFPNARFSLWIDGKLE 315 (542)
Q Consensus 242 ~~VcFicFTDe~tl~~l~~~~~~~~~~k~G~WrIV~V~~lpy~------D~rRngRipKiLpHrLFPnyrYSIWIDgkIq 315 (542)
+.+.|+.++|..+....+.-..+... .....+++.++...+. ......-+.|++...|||+++--||+|+-+.
T Consensus 29 ~~~~~~il~~~is~~~~~~L~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~D~i 107 (246)
T cd00505 29 KPLRFHVLTNPLSDTFKAALDNLRKL-YNFNYELIPVDILDSVDSEHLKRPIKIVTLTKLHLPNLVPDYDKILYVDADIL 107 (246)
T ss_pred CCeEEEEEEccccHHHHHHHHHHHhc-cCceEEEEeccccCcchhhhhcCccccceeHHHHHHHHhhccCeEEEEcCCee
Confidence 47889999988554322211111000 0123445555422221 2223445789999999999999999999999
Q ss_pred EecCHHHHHHHHhhccCCeEEEecCCCCCCHHHHHHHHHHhccCChHHHHHHHHHH-HHcCCCCcccCCCCCCCCCCcce
Q 009158 316 LVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY-KNEGLTPYSEAKLPITSDVPEGC 394 (542)
Q Consensus 316 L~~DP~~LLe~~Lwr~n~~~AIskHp~R~cVYEEAeac~r~~K~d~~~I~~Qme~Y-r~eGLp~~s~~klP~~sgLpE~~ 394 (542)
+..|+..|.+--+ ++..+|+..-.. . .... +.| +..|++. ....+-++
T Consensus 108 v~~di~~L~~~~l--~~~~~aav~d~~----~------~~~~-----------~~~~~~~~~~~--------~~~yfNsG 156 (246)
T cd00505 108 VLTDIDELWDTPL--GGQELAAAPDPG----D------RREG-----------KYYRQKRSHLA--------GPDYFNSG 156 (246)
T ss_pred eccCHHHHhhccC--CCCeEEEccCch----h------hhcc-----------chhhcccCCCC--------CCCceeee
Confidence 9999999998666 566788864321 0 0000 111 1223321 22345567
Q ss_pred EEEcccCC-----chhHHHHHHHHHHhcCCCCCCchHHHHHhhh
Q 009158 395 VIIREHVP-----ISNLFVCLWFNEVDRFTSRDQISFSTVRDKL 433 (542)
Q Consensus 395 VIIR~Htp-----~snlFmclWFnEv~rfS~RDQLSF~YVl~Kl 433 (542)
|++=+-.. +.......|.+...+..--||=.++.++...
T Consensus 157 Vmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~ 200 (246)
T cd00505 157 VFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQV 200 (246)
T ss_pred eEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcC
Confidence 77732221 2222234455556678889999999998874
No 4
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=90.22 E-value=0.47 Score=44.39 Aligned_cols=115 Identities=15% Similarity=0.166 Sum_probs=65.0
Q ss_pred CCcceecccccCCCCCEEEEEeCceEEecCHHHHHHHHhhccCCeEEEecCCCCCCHHHHHHHHHHhccCChHHHHHHHH
Q 009158 290 GKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIE 369 (542)
Q Consensus 290 gRipKiLpHrLFPnyrYSIWIDgkIqL~~DP~~LLe~~Lwr~n~~~AIskHp~R~cVYEEAeac~r~~K~d~~~I~~Qme 369 (542)
.-+.|++.+.+|++|+--||+|+-+.+.+|+..|.+.-+ ++..+|+... ....
T Consensus 85 ~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~--~~~~~~a~~~-------------------------~~~~ 137 (250)
T PF01501_consen 85 ATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDL--QGKYLAAVED-------------------------ESFD 137 (250)
T ss_dssp GGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC-----TTSSEEEEE-----------------------------H
T ss_pred HHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccc--hhhhcccccc-------------------------chhh
Confidence 344699999999999999999999999999999998666 3566777665 0001
Q ss_pred HHHHcCCCCcccCCCCCCCCCCcceEEEcccCCch-hHHHHHHHHHHh----cCCCCCCchHHHHHhh
Q 009158 370 FYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPIS-NLFVCLWFNEVD----RFTSRDQISFSTVRDK 432 (542)
Q Consensus 370 ~Yr~eGLp~~s~~klP~~sgLpE~~VIIR~Htp~s-nlFmclWFnEv~----rfS~RDQLSF~YVl~K 432 (542)
.+ ..+-........+...+.+-++|++=+-.... +.+...+.+.+. +..-.||=-|++++..
T Consensus 138 ~~-~~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~ 204 (250)
T PF01501_consen 138 NF-PNKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYG 204 (250)
T ss_dssp HH-HTSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTT
T ss_pred hh-hhcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccc
Confidence 11 11111111222334566777887774332211 112222222222 2455899999999884
No 5
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=70.18 E-value=11 Score=35.87 Aligned_cols=90 Identities=14% Similarity=0.147 Sum_probs=62.8
Q ss_pred CCCEEEEEeCceEEecCHHHHHHHHhhccCCeEEEecCCCCCCHHHHHHHHHHhccCChHHHHHHHHHHHHcCCCCcccC
Q 009158 303 NARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEA 382 (542)
Q Consensus 303 nyrYSIWIDgkIqL~~DP~~LLe~~Lwr~n~~~AIskHp~R~cVYEEAeac~r~~K~d~~~I~~Qme~Yr~eGLp~~s~~ 382 (542)
+|+ -+++|+=+.+..||..+++ ..++++.++.-...... .+.
T Consensus 66 G~~-vl~~D~Dvv~~~dp~~~~~----~~~~Di~~~~d~~~~~~-----------------------~~~---------- 107 (212)
T PF03407_consen 66 GYD-VLFSDADVVWLRDPLPYFE----NPDADILFSSDGWDGTN-----------------------SDR---------- 107 (212)
T ss_pred CCc-eEEecCCEEEecCcHHhhc----cCCCceEEecCCCcccc-----------------------hhh----------
Confidence 444 5689999999999999981 15677777652210000 000
Q ss_pred CCCCCCCCCcceEEEcccCCchhHHHHHHHHHHhcCCC-CCCchHHHHHhhhc
Q 009158 383 KLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTS-RDQISFSTVRDKLW 434 (542)
Q Consensus 383 klP~~sgLpE~~VIIR~Htp~snlFmclWFnEv~rfS~-RDQLSF~YVl~Kl~ 434 (542)
..+.+-+++++=+.++.+..|+..|-......+. .||-.|..++....
T Consensus 108 ----~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~~~~ 156 (212)
T PF03407_consen 108 ----NGNLVNTGFYYFRPTPRTIAFLEDWLERMAESPGCWDQQAFNELLREQA 156 (212)
T ss_pred ----cCCccccceEEEecCHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHhcc
Confidence 0112235666666689999999999999999955 79999999999865
No 6
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=63.05 E-value=11 Score=38.22 Aligned_cols=96 Identities=13% Similarity=0.242 Sum_probs=61.2
Q ss_pred CCeeEEEEechhhHHHHhhccCCCCCccccceEEEEcCCCCCCC-----c---------------cccC-----Ccceec
Q 009158 242 KTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSD-----A---------------RRTG-----KIPKLL 296 (542)
Q Consensus 242 ~~VcFicFTDe~tl~~l~~~~~~~~~~k~G~WrIV~V~~lpy~D-----~---------------rRng-----RipKiL 296 (542)
.++.|..|||..+...++.--.. .....-..+++.+++..+.+ + .+.. -+.+++
T Consensus 28 ~~~~fhvvtd~~s~~~~~~~~~~-~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ 106 (257)
T cd06429 28 SNLVFHIVTDNQNYGAMRSWFDL-NPLKIATVKVLNFDDFKLLGKVKVDSLMQLESEADTSNLKQRKPEYISLLNFARFY 106 (257)
T ss_pred CceEEEEecCccCHHHHHHHHHh-cCCCCceEEEEEeCcHHhhcccccchhhhhhccccccccccCCccccCHHHHHHHH
Confidence 57899999998876655432111 01112356666664422211 1 0111 145666
Q ss_pred ccccCCCCCEEEEEeCceEEecCHHHHHHHHhhccCCeEEEecC
Q 009158 297 AHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRH 340 (542)
Q Consensus 297 pHrLFPnyrYSIWIDgkIqL~~DP~~LLe~~Lwr~n~~~AIskH 340 (542)
.-.+||+++--||+|+-+.+.+|...|.+.=+ ++..+|+...
T Consensus 107 ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl--~~~~~aav~d 148 (257)
T cd06429 107 LPELFPKLEKVIYLDDDVVVQKDLTELWNTDL--GGGVAGAVET 148 (257)
T ss_pred HHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCC--CCCEEEEEhh
Confidence 77889999999999999999999999998655 4666776554
No 7
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=56.93 E-value=73 Score=31.44 Aligned_cols=53 Identities=11% Similarity=0.162 Sum_probs=38.9
Q ss_pred eEEEEcCCCCCC-------CccccCCcceecccccCCCCCEEEEEeCceEEecCHHHHHHH
Q 009158 273 WRIVVIHNPPYS-------DARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILER 326 (542)
Q Consensus 273 WrIV~V~~lpy~-------D~rRngRipKiLpHrLFPnyrYSIWIDgkIqL~~DP~~LLe~ 326 (542)
++++.|+.+... +.+-.+-+.|+..-.+ .+|+--||||+-+.+..|+..|.+.
T Consensus 53 ~~~~~v~~i~~~~~~~~~~~~~~~~~~~kl~~~~l-~~~drvlylD~D~~v~~~i~~Lf~~ 112 (240)
T cd02537 53 WIVREVEPIDPPDSANLLKRPRFKDTYTKLRLWNL-TEYDKVVFLDADTLVLRNIDELFDL 112 (240)
T ss_pred CEEEecCccCCcchhhhccchHHHHHhHHHHhccc-cccceEEEEeCCeeEccCHHHHhCC
Confidence 677777654322 2233445778887776 5799999999999999998888764
No 8
>PF15471 TMEM171: Transmembrane protein family 171
Probab=51.12 E-value=17 Score=38.39 Aligned_cols=34 Identities=24% Similarity=0.457 Sum_probs=25.1
Q ss_pred hccccccccccceecCCCCCCccCCCCCCCCCCC
Q 009158 66 MDKMVSVRPIESTVFPPPPPSYFLGYTLPPGHPC 99 (542)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~c 99 (542)
+....--.+..+|++|||||+||...+.+..-+|
T Consensus 205 ~Ep~qVTVGDaViiFPPPPPPYF~ess~~a~t~~ 238 (319)
T PF15471_consen 205 TEPVQVTVGDAVIIFPPPPPPYFPESSASAVTRS 238 (319)
T ss_pred CCCEEEEecCEEEEcCCccCCCCCCCCcccccCC
Confidence 4444555677899999999999998877754444
No 9
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=49.94 E-value=16 Score=36.81 Aligned_cols=44 Identities=23% Similarity=0.428 Sum_probs=36.7
Q ss_pred ecccccCC-CCCEEEEEeCceEEecCHHHHHHHHhhccCCeEEEecC
Q 009158 295 LLAHRLFP-NARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRH 340 (542)
Q Consensus 295 iLpHrLFP-nyrYSIWIDgkIqL~~DP~~LLe~~Lwr~n~~~AIskH 340 (542)
+++..||| +++--||+|+-+.+++|...|.+-=+ ++.-+|+..|
T Consensus 86 L~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl--~~~~~Aav~d 130 (248)
T cd06432 86 LFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDL--KGAPYGYTPF 130 (248)
T ss_pred HHHHHhhhhccCEEEEEcCCceecccHHHHHhcCc--CCCeEEEeec
Confidence 66777899 69999999999999999999887655 5777888765
No 10
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=49.52 E-value=14 Score=38.41 Aligned_cols=47 Identities=19% Similarity=0.430 Sum_probs=37.3
Q ss_pred eecccccCCCCCEEEEEeCceEEecCHHHHHHHHhhccCCeEEEecCCCC
Q 009158 294 KLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKR 343 (542)
Q Consensus 294 KiLpHrLFPnyrYSIWIDgkIqL~~DP~~LLe~~Lwr~n~~~AIskHp~R 343 (542)
-+|.|-|=|...+.+|+|+-|. .-|-.||+.++. .+.+|-+++=..+
T Consensus 133 ~LL~~aL~p~~swVlWlDaDIv--~~P~~lI~dli~-~~kdIivPn~~~~ 179 (269)
T PF03452_consen 133 FLLSSALGPWHSWVLWLDADIV--ETPPTLIQDLIA-HDKDIIVPNCWRR 179 (269)
T ss_pred HHHHhhcCCcccEEEEEecCcc--cCChHHHHHHHh-CCCCEEccceeec
Confidence 3667777789999999999887 889999999995 5777877544333
No 11
>PLN02742 Probable galacturonosyltransferase
Probab=48.25 E-value=25 Score=39.96 Aligned_cols=95 Identities=14% Similarity=0.139 Sum_probs=60.1
Q ss_pred CCeeEEEEechhhHHHHhhccCCCCCccccceEEEEcCCCCCCCc--------------------------c--ccCCcc
Q 009158 242 KTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDA--------------------------R--RTGKIP 293 (542)
Q Consensus 242 ~~VcFicFTDe~tl~~l~~~~~~~~~~k~G~WrIV~V~~lpy~D~--------------------------r--RngRip 293 (542)
.++-|..+||..+...++.==. ....+.-.|.|..+++..+... . ...|-+
T Consensus 255 ~~~VFHiVTD~~n~~aM~~WF~-~n~~~~a~v~V~n~e~f~wl~~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p 333 (534)
T PLN02742 255 DQLVFHLVTDEVNYGAMQAWFA-MNDFKGVTVEVQKIEEFSWLNASYVPVLKQLQDSDTQSYYFSGSQDDGKTEIKFRNP 333 (534)
T ss_pred CcEEEEEeechhhHHHHHHHHh-hCCCCccEEEEEEeccccccccccchHHHHhhhhhhhhhhcccccccccccccccCc
Confidence 4588999999999887753100 1122335677777765322110 0 011212
Q ss_pred ee---------cccccCCCCCEEEEEeCceEEecCHHHHHHHHhhccCCeEEEec
Q 009158 294 KL---------LAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISR 339 (542)
Q Consensus 294 Ki---------LpHrLFPnyrYSIWIDgkIqL~~DP~~LLe~~Lwr~n~~~AIsk 339 (542)
|+ +.-++||+.+--||+|+-+.+.+|+..|.+-=| ++.-+|+..
T Consensus 334 ~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL--~~~viaAVe 386 (534)
T PLN02742 334 KYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDL--HGNVNGAVE 386 (534)
T ss_pred ccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCC--CCCEEEEeC
Confidence 32 333689999999999999999999999887545 466677653
No 12
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=47.23 E-value=13 Score=37.16 Aligned_cols=44 Identities=20% Similarity=0.322 Sum_probs=0.0
Q ss_pred CCCCcceEEEcccCCchhHHHHHHHHHHhcCC------CCCCchHHHHHhh
Q 009158 388 SDVPEGCVIIREHVPISNLFVCLWFNEVDRFT------SRDQISFSTVRDK 432 (542)
Q Consensus 388 sgLpE~~VIIR~Htp~snlFmclWFnEv~rfS------~RDQLSF~YVl~K 432 (542)
.||=-|.+|||.+ +-+..|.+.|+....+.. ..||=+|.|.+..
T Consensus 143 ~gLNtGsFliRns-~ws~~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~ 192 (239)
T PF05637_consen 143 NGLNTGSFLIRNS-PWSRDFLDAWADPLYRNYDWDQLEFDEQSALEHLLQW 192 (239)
T ss_dssp ---------------------------------------------------
T ss_pred ccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence 5666678899986 555668899997654432 3457777777654
No 13
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=43.18 E-value=51 Score=34.88 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=30.9
Q ss_pred eecccccCCCCCEEEEEeCceEEecCHHHHHHHH
Q 009158 294 KLLAHRLFPNARFSLWIDGKLELVVDPYQILERH 327 (542)
Q Consensus 294 KiLpHrLFPnyrYSIWIDgkIqL~~DP~~LLe~~ 327 (542)
.++...+||+.+--||+|+-+.+.+|+..|.+-|
T Consensus 87 RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~ 120 (304)
T cd06430 87 RLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFL 120 (304)
T ss_pred HHHHHHHhhhhceEEEeccceeecCCHHHHHHHH
Confidence 3888999999999999999999999999999863
No 14
>PLN02718 Probable galacturonosyltransferase
Probab=39.82 E-value=68 Score=37.11 Aligned_cols=96 Identities=11% Similarity=0.149 Sum_probs=61.0
Q ss_pred CCeeEEEEechhhHHHHhhccCCCCCccccceEEEEcCCCC-----CCC-----ccccCC------cceecccccCCCCC
Q 009158 242 KTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPP-----YSD-----ARRTGK------IPKLLAHRLFPNAR 305 (542)
Q Consensus 242 ~~VcFicFTDe~tl~~l~~~~~~~~~~k~G~WrIV~V~~lp-----y~D-----~rRngR------ipKiLpHrLFPnyr 305 (542)
.++.|..|||..+...+..--.+.. .....+.|+.+++.. |.+ +..+.+ +.+++.-.+||+++
T Consensus 341 ~~ivFHVvTD~is~~~mk~wf~l~~-~~~a~I~V~~Iddf~~lp~~~~~~lk~l~s~~~~~~S~~~y~Rl~ipellp~l~ 419 (603)
T PLN02718 341 EKIVFHVVTDSLNYPAISMWFLLNP-PGKATIQILNIDDMNVLPADYNSLLMKQNSHDPRYISALNHARFYLPDIFPGLN 419 (603)
T ss_pred CcEEEEEEeCCCCHHHHHHHHHhCC-CCCcEEEEEecchhccccccchhhhhhccccccccccHHHHHHHHHHHHhcccC
Confidence 4689999999988776652111111 113466777665321 111 001112 23556667899999
Q ss_pred EEEEEeCceEEecCHHHHHHHHhhccCCeEEEecC
Q 009158 306 FSLWIDGKLELVVDPYQILERHLWRKNATFAISRH 340 (542)
Q Consensus 306 YSIWIDgkIqL~~DP~~LLe~~Lwr~n~~~AIskH 340 (542)
--||+|+-+.+.+|+..|.+-=+ ++..+|+...
T Consensus 420 KvLYLD~DvVV~~DL~eL~~iDl--~~~v~aaVed 452 (603)
T PLN02718 420 KIVLFDHDVVVQRDLSRLWSLDM--KGKVVGAVET 452 (603)
T ss_pred EEEEEECCEEecCCHHHHhcCCC--CCcEEEEecc
Confidence 99999999999999999887545 4566766643
No 15
>PLN03181 glycosyltransferase; Provisional
Probab=39.73 E-value=35 Score=38.05 Aligned_cols=122 Identities=18% Similarity=0.175 Sum_probs=75.9
Q ss_pred CccccCCcceeccc----ccCCCCCEEEEEeCceEEecC-HHHHHHHHhhccCCeEEEecCCCCCCHHHHHHHHHHhccC
Q 009158 285 DARRTGKIPKLLAH----RLFPNARFSLWIDGKLELVVD-PYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKY 359 (542)
Q Consensus 285 D~rRngRipKiLpH----rLFPnyrYSIWIDgkIqL~~D-P~~LLe~~Lwr~n~~~AIskHp~R~cVYEEAeac~r~~K~ 359 (542)
++.+.+.|-|+..- .-||+++|-.|+|...-|+.- ..+=+++|. +. -+..|..=.-+|++
T Consensus 176 d~~~p~~WaKipalRaAM~a~PeAEWfWWLDsDALIMNp~~sLPl~ry~---~~--NLvvhg~p~~vy~~---------- 240 (453)
T PLN03181 176 HPKMNSYWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDMDFKLPLHRYR---DH--NLVVHGWPKLIYEK---------- 240 (453)
T ss_pred CccCchhhhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhhcC---Cc--cccccCCccccccc----------
Confidence 44455566665332 239999999999999988732 111133332 21 12233221112211
Q ss_pred ChHHHHHHHHHHHHcCCCCcccCCCCCCCCCCcceEEEcccCCchhHHHHHHHH------------HHh--------cCC
Q 009158 360 DNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFN------------EVD--------RFT 419 (542)
Q Consensus 360 d~~~I~~Qme~Yr~eGLp~~s~~klP~~sgLpE~~VIIR~Htp~snlFmclWFn------------Ev~--------rfS 419 (542)
.. ..|+--|.++||+| +-+-.|+..||. ++. -|-
T Consensus 241 -----------------qd--------w~GlN~GsFLIRNc-qWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~e 294 (453)
T PLN03181 241 -----------------RS--------WTALNAGVFLIRNC-QWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPE 294 (453)
T ss_pred -----------------cc--------ccccceeeeEEecC-HHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCC
Confidence 11 36777789999987 666668999987 221 144
Q ss_pred CCCCchHHHHHhhhccCCCccccccccchh
Q 009158 420 SRDQISFSTVRDKLWAKTNWTVNMFLDCER 449 (542)
Q Consensus 420 ~RDQLSF~YVl~Kl~~~~~~~lnMF~dcer 449 (542)
+=||=++.|.|-+-+. +|.-..|...++
T Consensus 295 aDDQsaLvyll~~~~~--~w~~k~ylE~~y 322 (453)
T PLN03181 295 SDDQSALVYLLYKHKE--KWGDKIYLEGEY 322 (453)
T ss_pred ccchHHHHHHHHhccc--hhccceeeecce
Confidence 5799999999998765 488888877764
No 16
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=39.20 E-value=29 Score=35.67 Aligned_cols=99 Identities=11% Similarity=0.103 Sum_probs=60.0
Q ss_pred CCCeeEEEEechhhHHHHhhccCCCCCccccceEEEEcCCC--CC---CCccccCCc--ceecccccCC-CCCEEEEEeC
Q 009158 241 RKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNP--PY---SDARRTGKI--PKLLAHRLFP-NARFSLWIDG 312 (542)
Q Consensus 241 ~~~VcFicFTDe~tl~~l~~~~~~~~~~k~G~WrIV~V~~l--py---~D~rRngRi--pKiLpHrLFP-nyrYSIWIDg 312 (542)
...++|+.|+|+.....++.-...-+ .....+.++.+++. .+ ......+.+ .+++.+.+|| +++--||+|+
T Consensus 28 ~~~~~fhii~d~~s~~~~~~l~~~~~-~~~~~i~f~~i~~~~~~~~~~~~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~ 106 (280)
T cd06431 28 RNPLHFHLITDEIARRILATLFQTWM-VPAVEVSFYNAEELKSRVSWIPNKHYSGIYGLMKLVLTEALPSDLEKVIVLDT 106 (280)
T ss_pred CCCEEEEEEECCcCHHHHHHHHHhcc-ccCcEEEEEEhHHhhhhhccCcccchhhHHHHHHHHHHHhchhhcCEEEEEcC
Confidence 35689999999776544332110000 11234555555321 11 111122222 4888999999 7999999999
Q ss_pred ceEEecCHHHHHHHHh-hccCCeEEEecC
Q 009158 313 KLELVVDPYQILERHL-WRKNATFAISRH 340 (542)
Q Consensus 313 kIqL~~DP~~LLe~~L-wr~n~~~AIskH 340 (542)
=+.+.+|+..|.+-+. ..++.-+|+..+
T Consensus 107 Diiv~~di~eL~~~~~~~~~~~~~a~v~~ 135 (280)
T cd06431 107 DITFATDIAELWKIFHKFTGQQVLGLVEN 135 (280)
T ss_pred CEEEcCCHHHHHHHhhhcCCCcEEEEecc
Confidence 9999999999998741 224456676654
No 17
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=30.08 E-value=41 Score=34.42 Aligned_cols=41 Identities=15% Similarity=0.399 Sum_probs=34.6
Q ss_pred ccccCCCCCEEEEEeCceEEecCHHHHHHHHhhccCCeEEEec
Q 009158 297 AHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISR 339 (542)
Q Consensus 297 pHrLFPnyrYSIWIDgkIqL~~DP~~LLe~~Lwr~n~~~AIsk 339 (542)
.+.++|++++-++|||-|-+ ++|...||.|+. .+.++-++.
T Consensus 35 va~~L~~~~~vlflDaDigV-vNp~~~iEefid-~~~Di~fyd 75 (222)
T PF03314_consen 35 VAKILPEYDWVLFLDADIGV-VNPNRRIEEFID-EGYDIIFYD 75 (222)
T ss_pred HHHHhccCCEEEEEcCCcee-ecCcccHHHhcC-CCCcEEEEe
Confidence 45778999999999999876 789999999994 677777754
No 18
>PLN02769 Probable galacturonosyltransferase
Probab=23.11 E-value=1.6e+02 Score=34.50 Aligned_cols=49 Identities=8% Similarity=0.131 Sum_probs=37.5
Q ss_pred cCCcceeccc------ccCCCCCEEEEEeCceEEecCHHHHHHHHhhccCCeEEEec
Q 009158 289 TGKIPKLLAH------RLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISR 339 (542)
Q Consensus 289 ngRipKiLpH------rLFPnyrYSIWIDgkIqL~~DP~~LLe~~Lwr~n~~~AIsk 339 (542)
+.++..++.| .|||+.+--||+|.-+.+.+|...|.+-=| ++.-+|+..
T Consensus 431 ~~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL--~gkviAAVe 485 (629)
T PLN02769 431 RTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDM--GGKVNGAVQ 485 (629)
T ss_pred CcccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCC--CCCeEEEeh
Confidence 4455555555 689999999999999999999999987544 455677753
No 19
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=21.44 E-value=63 Score=33.96 Aligned_cols=114 Identities=14% Similarity=0.164 Sum_probs=68.3
Q ss_pred CCccCChhhHHHHhccCcEEEEEeeeCCCcccCCCC-------CCCcccCCCeeEEEEechhhHHHHhhccCCCCCcccc
Q 009158 199 TGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPS-------NISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIG 271 (542)
Q Consensus 199 ~Gf~i~e~D~~~m~~CkkVVVYTAIFGnYD~L~qP~-------~Is~~s~~~VcFicFTDe~tl~~l~~~~~~~~~~k~G 271 (542)
+-|+..=-|..|-.+.-+|.+.---+|.|-...+.= .+ ..-.|-|+.|||.... ++.- .++...
T Consensus 18 gtf~~~~l~~~y~~~n~tIgl~vfatGkY~~f~~~F~~SAEk~Fm---~g~~v~YyVFTD~~~~--~p~v-~lg~~r--- 88 (271)
T cd02515 18 GTFNPDVLDEYYRKQNITIGLTVFAVGKYTEFLERFLESAEKHFM---VGYRVIYYIFTDKPAA--VPEV-ELGPGR--- 88 (271)
T ss_pred CcCCHHHHHHHHHhcCCEEEEEEEEeccHHHHHHHHHHHHHHhcc---CCCeeEEEEEeCCccc--Cccc-ccCCCc---
Confidence 346766667777777766776666678886543321 12 1257899999998753 2210 111122
Q ss_pred ceEEEEc-CCCCCCCc--cccCCcceecccccCCCCCEEEEEeCceEEecCHH
Q 009158 272 IWRIVVI-HNPPYSDA--RRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPY 321 (542)
Q Consensus 272 ~WrIV~V-~~lpy~D~--rRngRipKiLpHrLFPnyrYSIWIDgkIqL~~DP~ 321 (542)
.=+++.| ....+.|. +|..-+-+...-+++-++||-...|+++.+..+..
T Consensus 89 ~~~V~~v~~~~~W~~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig 141 (271)
T cd02515 89 RLTVLKIAEESRWQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFG 141 (271)
T ss_pred eeEEEEeccccCCcHHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCC
Confidence 2234444 34555444 33323333333346889999999999999997765
Done!