BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 009164
         (541 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q84ZT9|WVD2_ARATH Protein WAVE-DAMPENED 2 OS=Arabidopsis thaliana GN=WVD2 PE=2 SV=1
          Length = 202

 Score = 68.2 bits (165), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 4/110 (3%)

Query: 373 DCSKFLSACRNKLQSPNSFTPFRLRTEERAARRKE---KLEEKFNANQIQKLQKQVTLKE 429
           DCS   S+ +N        T  R R+ +RA +RKE   KLEEK  A + ++++ +   KE
Sbjct: 67  DCS-VASSMKNAKSKVTHGTAPRFRSAQRAEKRKEYYQKLEEKHQALEAERIELEQRQKE 125

Query: 430 KAETEIRKLRQTLCFKARPLPHFYKERAIPKSQMNKDPPTRPQSPKLTAS 479
           + E  I++LR+ L FKA P+P FY +R   K ++ K P TRP+SPKL  S
Sbjct: 126 EQEAAIKQLRKNLKFKANPVPDFYYQRPPVKPELKKFPLTRPKSPKLNLS 175


>sp|Q8GYX9|WDL1_ARATH Protein WVD2-like 1 OS=Arabidopsis thaliana GN=WDL1 PE=2 SV=1
          Length = 286

 Score = 60.1 bits (144), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 3/87 (3%)

Query: 396 LRTEERAARRKE---KLEEKFNANQIQKLQKQVTLKEKAETEIRKLRQTLCFKARPLPHF 452
            R+ +RA +RKE   KLEEK  A + ++ + +   K++ E  +++LR+ L FKA+P+P+F
Sbjct: 128 FRSAQRAEKRKEYYQKLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKAKPVPNF 187

Query: 453 YKERAIPKSQMNKDPPTRPQSPKLTAS 479
           Y E    K ++ K P TRP+SPKL  S
Sbjct: 188 YYEAPPAKPELKKLPLTRPKSPKLILS 214


>sp|E2RYF8|TPX2_ASTPE Targeting protein for Xklp2 homolog OS=Asterina pectinifera GN=TPX2
           PE=2 SV=1
          Length = 891

 Score = 33.1 bits (74), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 17/115 (14%)

Query: 369 FLPTDCSKFLSACRNKLQSPNSFTPFRLRTEERAARRKEKLEEKFN---ANQIQKLQKQV 425
           F+P   +K ++   N          F L TE RA  RK   + K+    A    + Q++ 
Sbjct: 784 FVPEKSTKPMTDISN----------FSLNTERRAEDRKGYEQAKYERQLAQDTAQAQREA 833

Query: 426 TLKEKAETEIRKLRQTLCFKARPLPHFYKERAIPKSQMNKDPPTRPQSPKLTAST 480
             +E+   +I K R     KA+P+ H+     +P ++    P T+P++PK +  T
Sbjct: 834 EKEEELRQQISKQRADSIHKAKPVRHYKAVEVLPSTK----PLTQPKTPKFSDRT 884


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.308    0.121    0.338 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 194,691,505
Number of Sequences: 539616
Number of extensions: 8072518
Number of successful extensions: 31220
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 725
Number of HSP's that attempted gapping in prelim test: 29558
Number of HSP's gapped (non-prelim): 2122
length of query: 541
length of database: 191,569,459
effective HSP length: 122
effective length of query: 419
effective length of database: 125,736,307
effective search space: 52683512633
effective search space used: 52683512633
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)