Query 009167
Match_columns 541
No_of_seqs 559 out of 3527
Neff 7.4
Searched_HMMs 46136
Date Thu Mar 28 21:14:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009167.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009167hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0626 MetC Cystathionine bet 100.0 5.5E-78 1.2E-82 626.1 41.3 387 152-541 7-395 (396)
2 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 2.9E-75 6.3E-80 612.2 41.0 383 154-539 1-386 (386)
3 COG2873 MET17 O-acetylhomoseri 100.0 3.3E-75 7.1E-80 581.2 35.0 386 152-541 7-426 (426)
4 PRK08114 cystathionine beta-ly 100.0 4.6E-71 9.9E-76 581.6 41.4 382 153-541 6-394 (395)
5 PRK08861 cystathionine gamma-s 100.0 1.6E-70 3.4E-75 579.0 41.9 379 152-541 5-384 (388)
6 PRK06702 O-acetylhomoserine am 100.0 1.3E-69 2.8E-74 576.7 41.5 383 153-539 7-423 (432)
7 PRK09028 cystathionine beta-ly 100.0 1.8E-69 3.9E-74 570.8 42.1 382 152-540 4-387 (394)
8 KOG0053 Cystathionine beta-lya 100.0 4.2E-70 9.1E-75 560.0 35.5 389 148-541 17-407 (409)
9 PRK08249 cystathionine gamma-s 100.0 5.3E-69 1.2E-73 570.4 43.7 386 152-540 8-393 (398)
10 PRK05967 cystathionine beta-ly 100.0 1.4E-68 3E-73 563.3 41.6 376 153-541 13-392 (395)
11 PRK08248 O-acetylhomoserine am 100.0 7.8E-68 1.7E-72 566.0 42.4 386 153-541 9-428 (431)
12 TIGR01328 met_gam_lyase methio 100.0 1.9E-67 4E-72 557.9 43.2 386 153-541 4-391 (391)
13 PRK08045 cystathionine gamma-s 100.0 1.6E-67 3.6E-72 556.9 42.7 379 152-541 4-383 (386)
14 PRK05613 O-acetylhomoserine am 100.0 1.8E-67 3.8E-72 563.1 42.0 386 153-541 14-437 (437)
15 PRK07812 O-acetylhomoserine am 100.0 2.5E-67 5.4E-72 561.7 43.0 386 153-541 14-432 (436)
16 PRK08134 O-acetylhomoserine am 100.0 8.2E-67 1.8E-71 558.1 43.3 386 152-540 8-427 (433)
17 PRK06084 O-acetylhomoserine am 100.0 9.4E-67 2E-71 557.1 42.6 385 153-540 3-422 (425)
18 PRK07810 O-succinylhomoserine 100.0 1.3E-66 2.8E-71 553.1 43.0 383 152-538 15-402 (403)
19 TIGR02080 O_succ_thio_ly O-suc 100.0 5.8E-66 1.2E-70 544.7 42.6 378 152-540 3-381 (382)
20 PRK08133 O-succinylhomoserine 100.0 6.2E-66 1.3E-70 546.3 42.9 384 153-540 7-390 (390)
21 PRK07049 methionine gamma-lyas 100.0 7.3E-66 1.6E-70 550.9 43.0 386 153-540 18-426 (427)
22 PRK08574 cystathionine gamma-s 100.0 6.5E-66 1.4E-70 544.8 41.7 380 153-541 3-385 (385)
23 PRK07504 O-succinylhomoserine 100.0 1.1E-65 2.4E-70 545.6 43.3 385 153-541 11-396 (398)
24 PRK07503 methionine gamma-lyas 100.0 1.4E-65 3.1E-70 545.5 43.0 385 153-540 10-396 (403)
25 PRK05939 hypothetical protein; 100.0 1.2E-65 2.7E-70 544.3 41.7 370 168-540 5-396 (397)
26 PRK06176 cystathionine gamma-s 100.0 1.4E-65 3.1E-70 541.3 41.9 376 153-541 3-379 (380)
27 TIGR01324 cysta_beta_ly_B cyst 100.0 3.9E-65 8.5E-70 537.0 43.3 375 155-541 1-377 (377)
28 PRK08776 cystathionine gamma-s 100.0 4.4E-65 9.5E-70 541.4 42.8 378 153-541 13-391 (405)
29 TIGR01325 O_suc_HS_sulf O-succ 100.0 4.4E-65 9.5E-70 538.3 41.9 380 154-538 1-380 (380)
30 PRK05994 O-acetylhomoserine am 100.0 8.9E-65 1.9E-69 542.8 43.1 385 153-540 8-426 (427)
31 PRK06234 methionine gamma-lyas 100.0 1.3E-64 2.8E-69 537.9 43.4 386 153-541 9-398 (400)
32 PRK06767 methionine gamma-lyas 100.0 1.6E-64 3.4E-69 535.2 42.6 381 152-541 5-386 (386)
33 PRK07671 cystathionine beta-ly 100.0 2E-64 4.3E-69 532.3 42.7 374 153-539 3-377 (377)
34 PLN02509 cystathionine beta-ly 100.0 3E-64 6.6E-69 540.0 41.8 374 153-540 87-461 (464)
35 PRK06460 hypothetical protein; 100.0 5.2E-64 1.1E-68 529.2 42.5 373 153-541 3-375 (376)
36 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 3.3E-64 7.1E-69 537.7 41.0 384 153-539 2-418 (418)
37 cd00614 CGS_like CGS_like: Cys 100.0 8.9E-64 1.9E-68 526.6 41.4 368 171-539 1-369 (369)
38 PRK06434 cystathionine gamma-l 100.0 8.2E-64 1.8E-68 526.5 39.9 376 152-540 8-384 (384)
39 TIGR01329 cysta_beta_ly_E cyst 100.0 1.8E-63 3.9E-68 525.4 41.8 374 154-541 2-376 (378)
40 PRK07811 cystathionine gamma-s 100.0 2.1E-63 4.6E-68 526.6 42.3 375 153-540 13-388 (388)
41 PRK07050 cystathionine beta-ly 100.0 9.1E-63 2E-67 522.4 41.2 380 152-540 9-391 (394)
42 PRK08064 cystathionine beta-ly 100.0 6E-62 1.3E-66 515.8 41.9 376 153-541 7-383 (390)
43 PLN02242 methionine gamma-lyas 100.0 2.7E-61 5.8E-66 514.1 41.8 381 153-540 18-415 (418)
44 PRK07269 cystathionine gamma-s 100.0 3.9E-60 8.5E-65 497.1 39.3 356 153-539 7-363 (364)
45 PRK05968 hypothetical protein; 100.0 4.5E-59 9.9E-64 493.7 40.7 374 155-540 11-386 (389)
46 PRK07582 cystathionine gamma-l 100.0 3.9E-59 8.4E-64 490.5 39.5 363 152-541 3-366 (366)
47 PRK08247 cystathionine gamma-s 100.0 1.5E-57 3.3E-62 478.7 40.6 362 150-540 2-364 (366)
48 COG1104 NifS Cysteine sulfinat 100.0 5.4E-31 1.2E-35 270.9 26.8 319 193-540 27-373 (386)
49 COG0520 csdA Selenocysteine ly 100.0 2.7E-26 5.8E-31 243.3 31.5 308 200-541 56-402 (405)
50 PRK10874 cysteine sulfinate de 100.0 3.3E-26 7.1E-31 243.5 30.4 297 206-540 59-394 (401)
51 PRK09295 bifunctional cysteine 100.0 5.8E-26 1.3E-30 242.2 29.8 300 205-541 62-401 (406)
52 TIGR03392 FeS_syn_CsdA cystein 99.9 1.4E-25 2.9E-30 238.6 30.1 294 209-540 59-391 (398)
53 PRK05957 aspartate aminotransf 99.9 1.1E-24 2.3E-29 231.3 32.2 287 210-540 69-385 (389)
54 PLN02855 Bifunctional selenocy 99.9 9E-25 1.9E-29 234.3 31.2 299 210-540 76-414 (424)
55 COG0079 HisC Histidinol-phosph 99.9 4.9E-25 1.1E-29 230.1 28.2 289 203-539 50-353 (356)
56 COG0436 Aspartate/tyrosine/aro 99.9 1.9E-24 4E-29 229.1 32.5 276 208-526 63-375 (393)
57 cd06453 SufS_like Cysteine des 99.9 8.7E-25 1.9E-29 230.0 29.4 294 209-538 42-373 (373)
58 TIGR01979 sufS cysteine desulf 99.9 1.1E-24 2.3E-29 231.9 30.0 299 208-540 60-397 (403)
59 PRK06207 aspartate aminotransf 99.9 1.8E-24 4E-29 230.7 31.8 282 213-539 85-401 (405)
60 PLN03227 serine palmitoyltrans 99.9 1.6E-24 3.4E-29 230.2 30.6 299 204-539 39-377 (392)
61 PRK07324 transaminase; Validat 99.9 2.5E-24 5.5E-29 227.2 31.0 281 202-532 56-359 (373)
62 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2.4E-24 5.3E-29 227.1 30.2 282 209-540 50-368 (370)
63 PRK14807 histidinol-phosphate 99.9 3.9E-24 8.6E-29 223.8 31.3 282 204-536 53-348 (351)
64 PLN03026 histidinol-phosphate 99.9 2.4E-24 5.2E-29 228.0 29.6 282 205-540 81-378 (380)
65 PRK07681 aspartate aminotransf 99.9 3.7E-24 8E-29 227.8 31.0 269 210-524 69-370 (399)
66 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.9E-24 6.4E-29 227.8 30.1 225 201-431 54-303 (387)
67 TIGR03403 nifS_epsilon cystein 99.9 2.3E-24 5.1E-29 227.9 28.8 314 198-540 30-371 (382)
68 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 6.2E-24 1.3E-28 223.0 31.4 222 204-431 38-284 (361)
69 PRK07179 hypothetical protein; 99.9 7E-24 1.5E-28 226.3 32.2 283 209-540 98-394 (407)
70 TIGR01977 am_tr_V_EF2568 cyste 99.9 7.8E-24 1.7E-28 222.8 31.8 301 210-541 44-376 (376)
71 TIGR01822 2am3keto_CoA 2-amino 99.9 1.1E-23 2.3E-28 223.4 33.0 285 209-540 82-385 (393)
72 PLN02651 cysteine desulfurase 99.9 2.3E-24 5E-29 226.6 27.6 301 202-531 35-363 (364)
73 PLN02721 threonine aldolase 99.9 5.7E-24 1.2E-28 221.7 30.3 285 207-539 37-347 (353)
74 PRK02948 cysteine desulfurase; 99.9 3.7E-24 8E-29 226.2 28.8 312 201-540 34-370 (381)
75 TIGR03402 FeS_nifS cysteine de 99.9 5E-24 1.1E-28 225.0 29.6 301 209-540 41-368 (379)
76 PRK06225 aspartate aminotransf 99.9 9.6E-24 2.1E-28 223.1 31.9 294 204-540 59-376 (380)
77 PRK06290 aspartate aminotransf 99.9 8.3E-24 1.8E-28 226.0 31.4 286 206-540 77-405 (410)
78 PRK04870 histidinol-phosphate 99.9 6.5E-24 1.4E-28 222.4 28.9 283 204-540 57-354 (356)
79 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.2E-23 2.5E-28 223.3 30.5 295 210-538 60-397 (397)
80 TIGR03540 DapC_direct LL-diami 99.9 2E-23 4.3E-28 220.8 31.8 276 204-525 60-369 (383)
81 PRK08960 hypothetical protein; 99.9 2.6E-23 5.7E-28 220.3 32.6 283 209-535 68-379 (387)
82 cd06454 KBL_like KBL_like; thi 99.9 3.1E-23 6.8E-28 215.6 32.5 286 208-540 44-347 (349)
83 PRK04781 histidinol-phosphate 99.9 1.6E-23 3.4E-28 220.5 30.3 284 204-537 53-360 (364)
84 PRK06425 histidinol-phosphate 99.9 6.4E-24 1.4E-28 220.6 27.0 279 204-538 34-331 (332)
85 PRK15481 transcriptional regul 99.9 1E-23 2.2E-28 226.7 29.1 285 206-538 116-429 (431)
86 PRK05764 aspartate aminotransf 99.9 4.1E-23 8.8E-28 219.0 32.7 284 210-539 68-390 (393)
87 PRK01688 histidinol-phosphate 99.9 3.7E-24 8E-29 224.1 24.2 280 204-538 51-350 (351)
88 PRK08361 aspartate aminotransf 99.9 1.7E-23 3.8E-28 222.0 29.5 273 208-524 68-372 (391)
89 PRK07682 hypothetical protein; 99.9 1.3E-23 2.8E-28 221.9 27.8 286 209-539 56-375 (378)
90 PLN02187 rooty/superroot1 99.9 5.9E-23 1.3E-27 222.5 33.4 287 208-539 106-437 (462)
91 TIGR01141 hisC histidinol-phos 99.9 1.5E-23 3.2E-28 218.5 27.5 280 205-538 49-345 (346)
92 PRK06348 aspartate aminotransf 99.9 3.9E-23 8.4E-28 218.9 31.1 285 205-534 60-376 (384)
93 TIGR03537 DapC succinyldiamino 99.9 4.3E-23 9.3E-28 215.8 30.9 279 205-530 30-340 (350)
94 PRK06108 aspartate aminotransf 99.9 7.5E-23 1.6E-27 215.9 32.8 274 211-530 62-369 (382)
95 PRK03158 histidinol-phosphate 99.9 1.4E-23 3.1E-28 219.9 27.1 278 205-535 59-356 (359)
96 PRK02731 histidinol-phosphate 99.9 1E-23 2.3E-28 221.5 25.7 285 204-539 61-365 (367)
97 PRK08068 transaminase; Reviewe 99.9 4.8E-23 1E-27 218.5 30.8 284 204-534 63-380 (389)
98 PRK07366 succinyldiaminopimela 99.9 6.2E-23 1.3E-27 217.5 31.4 274 210-530 68-377 (388)
99 PRK05942 aspartate aminotransf 99.9 5.3E-23 1.1E-27 218.6 30.9 285 206-537 68-386 (394)
100 PRK12414 putative aminotransfe 99.9 1.2E-22 2.6E-27 215.1 33.6 279 212-534 72-378 (384)
101 PRK09276 LL-diaminopimelate am 99.9 5.4E-23 1.2E-27 217.7 30.9 283 205-534 63-379 (385)
102 PRK00950 histidinol-phosphate 99.9 2.1E-23 4.5E-28 218.7 26.9 283 205-537 64-359 (361)
103 PTZ00433 tyrosine aminotransfe 99.9 7.1E-23 1.5E-27 218.9 31.5 274 205-525 69-391 (412)
104 PRK02610 histidinol-phosphate 99.9 3.8E-23 8.3E-28 218.2 28.5 282 205-540 61-371 (374)
105 PRK07337 aminotransferase; Val 99.9 6.8E-23 1.5E-27 217.2 30.6 280 211-534 68-380 (388)
106 PRK09147 succinyldiaminopimela 99.9 5.6E-23 1.2E-27 218.5 29.5 278 205-525 59-379 (396)
107 TIGR02006 IscS cysteine desulf 99.9 1.7E-23 3.6E-28 223.1 25.5 303 207-540 44-373 (402)
108 TIGR00858 bioF 8-amino-7-oxono 99.9 1.7E-22 3.6E-27 210.7 32.5 282 209-538 60-359 (360)
109 cd06502 TA_like Low-specificit 99.9 8.4E-23 1.8E-27 211.6 29.7 283 208-540 30-337 (338)
110 PLN00145 tyrosine/nicotianamin 99.9 1.3E-22 2.7E-27 218.2 32.0 282 206-534 89-415 (430)
111 PRK07550 hypothetical protein; 99.9 7.8E-23 1.7E-27 216.6 29.8 275 210-529 67-373 (386)
112 TIGR00474 selA seryl-tRNA(sec) 99.9 8.2E-24 1.8E-28 227.1 22.4 212 210-427 122-371 (454)
113 TIGR01140 L_thr_O3P_dcar L-thr 99.9 4.5E-23 9.7E-28 214.1 27.1 277 203-538 40-329 (330)
114 PLN02483 serine palmitoyltrans 99.9 2.8E-22 6E-27 218.5 34.5 284 209-539 145-461 (489)
115 PLN02656 tyrosine transaminase 99.9 1.6E-22 3.4E-27 216.1 31.7 277 209-532 72-392 (409)
116 PRK04635 histidinol-phosphate 99.9 3E-23 6.5E-28 217.4 25.4 278 204-539 54-350 (354)
117 PRK05958 8-amino-7-oxononanoat 99.9 3.2E-22 7E-27 210.8 33.4 287 206-540 80-383 (385)
118 PLN00143 tyrosine/nicotianamin 99.9 1.9E-22 4.1E-27 215.5 31.5 284 209-538 73-402 (409)
119 TIGR01264 tyr_amTase_E tyrosin 99.9 1.6E-22 3.5E-27 215.4 30.7 286 208-540 71-399 (401)
120 PRK01533 histidinol-phosphate 99.9 2.2E-23 4.9E-28 219.5 23.7 275 205-539 59-354 (366)
121 PRK13392 5-aminolevulinate syn 99.9 1.8E-22 3.9E-27 215.6 30.9 282 210-539 91-392 (410)
122 PF00266 Aminotran_5: Aminotra 99.9 1.1E-22 2.3E-27 214.3 28.7 299 202-534 35-371 (371)
123 PRK08153 histidinol-phosphate 99.9 9.2E-23 2E-27 215.0 27.8 285 206-539 63-364 (369)
124 PRK05387 histidinol-phosphate 99.9 1.2E-22 2.5E-27 212.4 28.1 281 205-539 55-352 (353)
125 TIGR01265 tyr_nico_aTase tyros 99.9 3.7E-22 8E-27 212.8 32.3 271 208-525 71-384 (403)
126 TIGR03538 DapC_gpp succinyldia 99.9 1.9E-22 4.1E-27 214.2 29.4 282 205-530 58-382 (393)
127 PRK08056 threonine-phosphate d 99.9 1.6E-22 3.5E-27 212.0 28.0 282 206-539 51-354 (356)
128 PLN00175 aminotransferase fami 99.9 1E-21 2.2E-26 210.2 34.3 272 211-524 92-395 (413)
129 cd06451 AGAT_like Alanine-glyo 99.9 3.4E-22 7.3E-27 209.0 30.0 288 210-540 32-353 (356)
130 PRK08912 hypothetical protein; 99.9 3.7E-22 8.1E-27 211.5 30.5 278 205-525 57-369 (387)
131 PRK07309 aromatic amino acid a 99.9 3.8E-22 8.1E-27 211.9 30.5 285 211-539 68-387 (391)
132 COG1168 MalY Bifunctional PLP- 99.9 1.2E-21 2.7E-26 198.4 32.4 313 183-540 35-386 (388)
133 COG1167 ARO8 Transcriptional r 99.9 5.3E-22 1.1E-26 214.7 31.0 284 210-536 132-448 (459)
134 PRK05166 histidinol-phosphate 99.9 2.2E-22 4.9E-27 212.1 27.1 281 205-538 66-369 (371)
135 PRK09105 putative aminotransfe 99.9 3.4E-22 7.3E-27 210.8 28.2 278 205-538 73-368 (370)
136 PRK09148 aminotransferase; Val 99.9 6.5E-22 1.4E-26 211.1 30.7 284 205-534 62-381 (405)
137 PRK09265 aminotransferase AlaT 99.9 8.5E-22 1.8E-26 210.1 31.3 289 206-539 67-400 (404)
138 PRK09082 methionine aminotrans 99.9 7.4E-22 1.6E-26 209.3 30.6 274 212-529 73-375 (386)
139 PRK07683 aminotransferase A; V 99.9 1.8E-21 4E-26 206.4 33.5 276 209-530 64-370 (387)
140 cd00616 AHBA_syn 3-amino-5-hyd 99.9 5.3E-22 1.1E-26 206.8 28.8 304 207-539 15-352 (352)
141 TIGR01821 5aminolev_synth 5-am 99.9 1.3E-21 2.7E-26 208.5 31.7 284 208-539 88-391 (402)
142 PRK05664 threonine-phosphate d 99.9 7.7E-22 1.7E-26 204.9 29.2 268 206-537 46-325 (330)
143 PRK06358 threonine-phosphate d 99.9 7.9E-22 1.7E-26 206.8 29.3 281 204-538 48-353 (354)
144 PRK04311 selenocysteine syntha 99.9 9.5E-23 2.1E-27 219.4 22.8 213 210-428 127-377 (464)
145 PRK13355 bifunctional HTH-doma 99.9 1.9E-21 4.1E-26 213.8 33.4 286 206-538 180-512 (517)
146 PRK07777 aminotransferase; Val 99.9 2.2E-21 4.8E-26 205.6 32.8 281 210-533 61-376 (387)
147 PRK07568 aspartate aminotransf 99.9 1.2E-21 2.5E-26 208.2 30.7 286 210-539 66-391 (397)
148 PRK03967 histidinol-phosphate 99.9 4.2E-22 9E-27 207.5 26.7 271 203-539 48-333 (337)
149 PRK03321 putative aminotransfe 99.9 1.8E-22 3.8E-27 211.1 23.9 279 205-540 52-351 (352)
150 PLN02450 1-aminocyclopropane-1 99.9 8.7E-22 1.9E-26 213.7 30.0 290 205-539 80-429 (468)
151 TIGR01437 selA_rel uncharacter 99.9 5.7E-22 1.2E-26 208.5 27.6 295 208-541 43-362 (363)
152 PRK08363 alanine aminotransfer 99.9 1.6E-21 3.6E-26 207.4 31.4 287 209-539 69-393 (398)
153 PRK13393 5-aminolevulinate syn 99.9 2E-21 4.4E-26 207.3 31.8 284 209-540 89-392 (406)
154 PRK06939 2-amino-3-ketobutyrat 99.9 2.5E-21 5.5E-26 204.9 32.1 249 209-484 86-353 (397)
155 PRK14012 cysteine desulfurase; 99.9 6.4E-22 1.4E-26 211.0 27.5 300 209-540 48-375 (404)
156 TIGR03235 DNA_S_dndA cysteine 99.9 5E-22 1.1E-26 207.8 26.2 283 209-522 41-353 (353)
157 PRK03317 histidinol-phosphate 99.9 6E-22 1.3E-26 208.5 26.5 217 204-427 59-298 (368)
158 PRK14809 histidinol-phosphate 99.9 6.3E-22 1.4E-26 207.5 26.4 275 206-538 61-355 (357)
159 PRK08175 aminotransferase; Val 99.9 1.4E-21 3.1E-26 207.7 29.1 276 211-531 68-377 (395)
160 PRK09064 5-aminolevulinate syn 99.9 2.9E-21 6.2E-26 206.1 31.5 285 208-540 89-393 (407)
161 PRK08636 aspartate aminotransf 99.9 3.2E-21 7E-26 205.6 31.3 275 211-530 72-387 (403)
162 TIGR03539 DapC_actino succinyl 99.9 1.8E-21 4E-26 204.1 28.8 268 205-525 50-345 (357)
163 PRK06107 aspartate aminotransf 99.9 5.7E-21 1.2E-25 203.6 33.0 282 213-540 77-400 (402)
164 PF00155 Aminotran_1_2: Aminot 99.9 1E-21 2.3E-26 205.6 26.7 275 204-528 37-354 (363)
165 TIGR01825 gly_Cac_T_rel pyrido 99.9 6E-21 1.3E-25 201.7 32.6 252 205-484 73-341 (385)
166 PRK07392 threonine-phosphate d 99.9 2.3E-21 5E-26 203.5 29.0 281 205-538 52-357 (360)
167 PRK07865 N-succinyldiaminopime 99.9 1.9E-21 4.1E-26 204.4 28.2 266 206-524 57-350 (364)
168 COG0156 BioF 7-keto-8-aminopel 99.9 4.3E-21 9.4E-26 200.7 30.2 286 208-541 82-387 (388)
169 PTZ00377 alanine aminotransfer 99.9 5.5E-21 1.2E-25 208.4 32.3 286 211-539 116-474 (481)
170 KOG1549 Cysteine desulfurase N 99.9 3.7E-22 8.1E-27 206.5 21.5 177 192-374 68-257 (428)
171 TIGR03576 pyridox_MJ0158 pyrid 99.9 6.1E-21 1.3E-25 199.3 30.5 274 208-538 52-345 (346)
172 PLN02822 serine palmitoyltrans 99.9 6.9E-21 1.5E-25 207.2 31.6 289 208-539 152-472 (481)
173 PRK06959 putative threonine-ph 99.9 2.2E-21 4.9E-26 202.2 26.6 271 204-540 48-333 (339)
174 PRK10534 L-threonine aldolase; 99.9 7.3E-21 1.6E-25 197.3 30.2 254 205-486 28-304 (333)
175 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.1E-20 2.4E-25 199.9 31.3 304 209-540 28-378 (380)
176 cd00609 AAT_like Aspartate ami 99.9 1E-20 2.2E-25 195.6 30.2 289 204-539 30-349 (350)
177 PRK06836 aspartate aminotransf 99.9 1.1E-20 2.3E-25 201.0 30.8 281 208-539 71-390 (394)
178 PLN02376 1-aminocyclopropane-1 99.9 1.7E-20 3.6E-25 204.8 31.0 283 211-538 95-436 (496)
179 PRK07908 hypothetical protein; 99.9 1.5E-20 3.3E-25 196.5 29.4 276 205-539 52-346 (349)
180 PRK05839 hypothetical protein; 99.9 1.2E-20 2.6E-25 199.3 28.6 273 204-530 53-361 (374)
181 PRK14808 histidinol-phosphate 99.9 5.9E-21 1.3E-25 198.8 25.6 244 204-484 50-308 (335)
182 PRK09440 avtA valine--pyruvate 99.9 7.9E-21 1.7E-25 203.2 27.2 299 206-539 69-410 (416)
183 PRK11658 UDP-4-amino-4-deoxy-L 99.9 2.1E-20 4.5E-25 197.8 29.9 254 208-484 31-321 (379)
184 PRK00854 rocD ornithine--oxo-a 99.9 2.7E-20 5.9E-25 198.2 30.7 285 207-539 80-396 (401)
185 TIGR02379 ECA_wecE TDP-4-keto- 99.9 4.5E-20 9.7E-25 195.0 31.4 307 209-540 30-373 (376)
186 TIGR02326 transamin_PhnW 2-ami 99.9 3.9E-20 8.4E-25 194.3 30.2 258 210-486 35-328 (363)
187 KOG1368 Threonine aldolase [Am 99.9 8.7E-21 1.9E-25 185.4 23.1 312 178-538 26-362 (384)
188 TIGR03542 DAPAT_plant LL-diami 99.9 3.2E-20 6.9E-25 197.9 29.7 276 208-530 73-391 (402)
189 PRK07590 L,L-diaminopimelate a 99.9 3E-20 6.4E-25 198.5 29.2 256 208-488 74-378 (409)
190 PRK06855 aminotransferase; Val 99.9 5.5E-20 1.2E-24 198.0 31.4 214 210-429 73-327 (433)
191 PLN02607 1-aminocyclopropane-1 99.9 3.1E-20 6.7E-25 200.4 29.4 284 211-539 96-436 (447)
192 PLN02955 8-amino-7-oxononanoat 99.9 6.5E-20 1.4E-24 196.0 31.4 280 210-540 147-457 (476)
193 PRK13034 serine hydroxymethylt 99.9 4.9E-20 1.1E-24 197.2 30.6 221 200-427 58-305 (416)
194 PRK13479 2-aminoethylphosphona 99.9 5.9E-20 1.3E-24 193.1 29.7 258 210-486 37-329 (368)
195 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.1E-19 2.4E-24 189.3 31.4 288 210-540 31-353 (355)
196 PRK08354 putative aminotransfe 99.9 4.1E-20 8.9E-25 190.4 27.8 159 212-384 42-205 (311)
197 PLN02409 serine--glyoxylate am 99.9 7E-20 1.5E-24 195.3 30.0 170 209-382 41-224 (401)
198 PRK05937 8-amino-7-oxononanoat 99.9 8.3E-20 1.8E-24 192.6 30.0 278 208-540 54-346 (370)
199 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 1.5E-19 3.3E-24 191.0 31.8 258 209-486 30-319 (375)
200 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.7E-19 3.6E-24 189.7 31.0 277 210-541 59-373 (373)
201 PRK13520 L-tyrosine decarboxyl 99.9 9.7E-20 2.1E-24 191.3 28.9 276 211-540 60-367 (371)
202 cd00613 GDC-P Glycine cleavage 99.9 1.6E-19 3.4E-24 191.7 30.2 286 210-538 64-398 (398)
203 cd00378 SHMT Serine-glycine hy 99.9 1.2E-19 2.5E-24 193.2 29.1 247 216-485 71-339 (402)
204 COG2008 GLY1 Threonine aldolas 99.9 1.6E-19 3.5E-24 182.7 28.2 309 178-540 4-339 (342)
205 PF01041 DegT_DnrJ_EryC1: DegT 99.9 4.7E-20 1E-24 194.1 24.9 304 209-538 24-362 (363)
206 COG0399 WecE Predicted pyridox 99.9 1.1E-19 2.3E-24 189.0 27.0 251 209-482 33-311 (374)
207 cd06450 DOPA_deC_like DOPA dec 99.9 4E-20 8.6E-25 192.3 23.6 268 209-541 37-345 (345)
208 KOG0257 Kynurenine aminotransf 99.9 4.4E-20 9.5E-25 189.0 23.0 221 201-427 62-326 (420)
209 PRK03244 argD acetylornithine 99.9 1.8E-19 3.9E-24 191.7 28.7 287 203-539 78-393 (398)
210 TIGR01814 kynureninase kynuren 99.9 2.1E-19 4.5E-24 191.9 29.1 281 212-540 73-403 (406)
211 PLN02724 Molybdenum cofactor s 99.9 9E-20 2E-24 209.7 26.3 325 197-540 65-484 (805)
212 PRK00011 glyA serine hydroxyme 99.9 3.6E-19 7.9E-24 190.4 28.9 254 209-485 66-343 (416)
213 PLN02231 alanine transaminase 99.9 1.4E-18 3.1E-23 190.9 34.0 218 210-431 168-441 (534)
214 PRK04073 rocD ornithine--oxo-a 99.8 7.4E-19 1.6E-23 187.1 28.6 283 207-539 79-392 (396)
215 cd00610 OAT_like Acetyl ornith 99.8 1.7E-18 3.8E-23 184.5 30.4 288 208-540 77-411 (413)
216 PRK15407 lipopolysaccharide bi 99.8 2.2E-18 4.8E-23 185.4 31.3 255 209-485 62-376 (438)
217 PLN02368 alanine transaminase 99.8 7.8E-19 1.7E-23 187.3 26.9 221 205-431 101-381 (407)
218 TIGR00707 argD acetylornithine 99.8 1.3E-18 2.8E-23 183.4 28.4 287 204-540 63-377 (379)
219 PTZ00376 aspartate aminotransf 99.8 1.5E-18 3.3E-23 185.1 28.4 214 209-427 71-337 (404)
220 PLN02672 methionine S-methyltr 99.8 2.4E-18 5.2E-23 198.3 31.7 212 211-427 735-989 (1082)
221 PRK13238 tnaA tryptophanase/L- 99.8 8.4E-18 1.8E-22 181.8 32.2 211 208-427 76-335 (460)
222 PTZ00125 ornithine aminotransf 99.8 4.2E-18 9.1E-23 181.2 29.2 285 208-540 71-395 (400)
223 PTZ00094 serine hydroxymethylt 99.8 2.3E-18 5.1E-23 186.3 27.2 301 198-539 67-403 (452)
224 PRK01278 argD acetylornithine 99.8 3.4E-18 7.3E-23 181.4 27.2 287 207-541 70-389 (389)
225 cd00615 Orn_deC_like Ornithine 99.8 5.7E-19 1.2E-23 180.5 20.3 166 202-374 51-235 (294)
226 PRK00451 glycine dehydrogenase 99.8 6.5E-18 1.4E-22 182.5 29.2 284 212-541 114-445 (447)
227 PRK08637 hypothetical protein; 99.8 2.7E-17 5.9E-22 174.5 32.9 290 201-540 37-386 (388)
228 PRK09275 aspartate aminotransf 99.8 6.3E-18 1.4E-22 184.2 28.5 161 211-375 135-328 (527)
229 PRK02627 acetylornithine amino 99.8 7E-18 1.5E-22 179.0 27.3 288 204-540 75-394 (396)
230 PRK07505 hypothetical protein; 99.8 4.9E-17 1.1E-21 173.4 32.2 192 206-404 87-297 (402)
231 PRK09257 aromatic amino acid a 99.8 2.6E-17 5.6E-22 175.1 28.7 213 210-427 69-332 (396)
232 PLN02397 aspartate transaminas 99.8 2.3E-17 5E-22 177.1 27.4 214 209-427 90-355 (423)
233 cd00617 Tnase_like Tryptophana 99.8 4.1E-17 8.8E-22 174.5 28.4 212 208-427 51-310 (431)
234 TIGR03801 asp_4_decarbox aspar 99.8 2.2E-17 4.8E-22 179.7 26.3 145 227-375 157-327 (521)
235 KOG0259 Tyrosine aminotransfer 99.8 1.8E-16 3.9E-21 160.1 30.4 223 208-436 101-361 (447)
236 PRK02936 argD acetylornithine 99.8 1.3E-16 2.9E-21 168.4 29.0 281 206-539 67-374 (377)
237 TIGR01788 Glu-decarb-GAD gluta 99.8 8.9E-17 1.9E-21 172.2 27.4 292 204-541 75-430 (431)
238 cd01494 AAT_I Aspartate aminot 99.8 1.2E-17 2.5E-22 154.3 17.4 156 212-373 2-170 (170)
239 PLN03032 serine decarboxylase; 99.8 1.3E-16 2.9E-21 167.6 27.2 225 196-427 52-314 (374)
240 COG4992 ArgD Ornithine/acetylo 99.8 4.5E-17 9.7E-22 168.1 22.9 290 202-540 76-398 (404)
241 TIGR03246 arg_catab_astC succi 99.8 3.9E-16 8.5E-21 166.3 30.6 257 206-481 73-359 (397)
242 PRK05093 argD bifunctional N-s 99.8 3.2E-16 7E-21 167.2 30.0 256 208-483 80-366 (403)
243 PRK04366 glycine dehydrogenase 99.8 1.2E-16 2.5E-21 174.2 27.0 165 210-380 113-297 (481)
244 PRK02769 histidine decarboxyla 99.8 3.2E-16 6.8E-21 165.6 27.1 234 198-436 53-319 (380)
245 TIGR01885 Orn_aminotrans ornit 99.8 7.7E-16 1.7E-20 164.2 30.2 287 207-539 76-397 (401)
246 PRK12381 bifunctional succinyl 99.8 9.5E-16 2.1E-20 163.8 30.3 258 206-483 77-365 (406)
247 PLN02624 ornithine-delta-amino 99.8 5.7E-16 1.2E-20 168.5 28.9 264 204-483 111-410 (474)
248 KOG0633 Histidinol phosphate a 99.7 1.6E-16 3.6E-21 153.0 20.7 289 206-537 65-374 (375)
249 PRK13580 serine hydroxymethylt 99.7 1.1E-15 2.4E-20 163.9 27.6 245 216-484 101-398 (493)
250 PRK03080 phosphoserine aminotr 99.7 6.4E-16 1.4E-20 163.6 25.5 279 210-540 48-369 (378)
251 COG0075 Serine-pyruvate aminot 99.7 4.4E-15 9.6E-20 154.5 29.4 215 210-428 38-285 (383)
252 PLN00144 acetylornithine trans 99.7 2.1E-15 4.6E-20 159.8 26.9 283 207-540 54-380 (382)
253 PF01212 Beta_elim_lyase: Beta 99.7 2E-17 4.3E-22 168.4 10.8 221 203-429 24-272 (290)
254 KOG0256 1-aminocyclopropane-1- 99.7 3.5E-15 7.6E-20 152.1 26.8 270 212-529 123-447 (471)
255 PLN03226 serine hydroxymethylt 99.7 6.1E-15 1.3E-19 160.0 29.6 214 208-427 74-333 (475)
256 cd00611 PSAT_like Phosphoserin 99.7 2.2E-15 4.7E-20 158.2 24.9 277 210-541 44-353 (355)
257 PRK04260 acetylornithine amino 99.7 5.5E-15 1.2E-19 156.1 27.6 277 211-540 67-373 (375)
258 PLN02414 glycine dehydrogenase 99.7 4.1E-15 8.8E-20 171.4 28.4 166 211-380 569-755 (993)
259 TIGR01364 serC_1 phosphoserine 99.7 7.3E-15 1.6E-19 153.8 26.0 285 201-540 25-344 (349)
260 TIGR00713 hemL glutamate-1-sem 99.7 1.3E-14 2.8E-19 155.8 28.2 285 207-541 85-423 (423)
261 KOG1360 5-aminolevulinate synt 99.7 3.8E-15 8.2E-20 150.9 21.8 283 209-539 215-519 (570)
262 KOG1359 Glycine C-acetyltransf 99.7 2.8E-15 6E-20 146.8 19.9 280 208-539 110-407 (417)
263 TIGR03531 selenium_SpcS O-phos 99.7 9.8E-15 2.1E-19 156.2 25.3 212 210-427 105-344 (444)
264 PRK05355 3-phosphoserine/phosp 99.7 8.4E-15 1.8E-19 154.0 24.3 276 210-540 48-354 (360)
265 TIGR03372 putres_am_tran putre 99.7 5.1E-14 1.1E-18 151.5 30.0 292 207-540 114-440 (442)
266 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 2E-15 4.3E-20 159.3 18.2 176 208-390 64-274 (417)
267 PRK04013 argD acetylornithine/ 99.7 1.5E-14 3.3E-19 152.0 24.7 277 204-540 60-360 (364)
268 PF06838 Met_gamma_lyase: Meth 99.7 1.4E-14 3.1E-19 146.8 23.0 254 207-478 51-332 (403)
269 PLN02271 serine hydroxymethylt 99.7 6.8E-14 1.5E-18 151.0 29.6 214 208-427 188-454 (586)
270 PRK04612 argD acetylornithine 99.7 2.4E-14 5.3E-19 152.9 26.1 290 207-540 79-403 (408)
271 COG1103 Archaea-specific pyrid 99.6 4.3E-14 9.4E-19 137.1 23.8 218 208-431 59-302 (382)
272 PRK03715 argD acetylornithine 99.6 8.5E-14 1.8E-18 148.2 28.3 235 207-464 75-339 (395)
273 TIGR01366 serC_3 phosphoserine 99.6 2.2E-14 4.9E-19 150.9 22.8 284 210-540 41-356 (361)
274 PRK05964 adenosylmethionine--8 99.6 1.5E-13 3.2E-18 147.7 29.1 258 206-481 81-387 (423)
275 KOG0634 Aromatic amino acid am 99.6 2E-13 4.3E-18 140.4 27.7 285 214-536 104-459 (472)
276 PRK11522 putrescine--2-oxoglut 99.6 1.8E-13 3.9E-18 148.2 29.1 291 207-539 121-450 (459)
277 TIGR02618 tyr_phenol_ly tyrosi 99.6 4.2E-14 9.1E-19 149.9 23.4 215 203-427 66-328 (450)
278 PRK08117 4-aminobutyrate amino 99.6 2E-13 4.4E-18 147.1 27.4 293 205-540 81-429 (433)
279 PRK09792 4-aminobutyrate trans 99.6 2.6E-13 5.6E-18 145.7 28.0 258 204-483 77-385 (421)
280 PRK00062 glutamate-1-semialdeh 99.6 1.6E-13 3.5E-18 147.5 25.2 287 207-540 87-424 (426)
281 PRK08088 4-aminobutyrate amino 99.6 5.9E-13 1.3E-17 143.2 28.2 289 207-540 81-423 (425)
282 PRK08593 4-aminobutyrate amino 99.6 1E-12 2.2E-17 142.0 30.1 254 206-481 81-393 (445)
283 PRK08360 4-aminobutyrate amino 99.6 1.3E-12 2.8E-17 141.0 30.9 252 208-481 82-390 (443)
284 TIGR00700 GABAtrnsam 4-aminobu 99.6 1.3E-12 2.8E-17 140.3 30.6 261 204-486 70-387 (420)
285 COG0160 GabT 4-aminobutyrate a 99.6 4.5E-13 9.8E-18 142.2 26.3 281 210-540 99-445 (447)
286 PRK06777 4-aminobutyrate amino 99.6 1.7E-12 3.6E-17 139.5 30.4 288 204-538 77-419 (421)
287 TIGR02407 ectoine_ectB diamino 99.6 1.2E-12 2.6E-17 140.1 28.8 284 207-539 75-407 (412)
288 PRK07495 4-aminobutyrate amino 99.6 1.1E-12 2.3E-17 141.0 27.7 288 206-540 79-421 (425)
289 COG0112 GlyA Glycine/serine hy 99.6 6.1E-13 1.3E-17 136.0 23.9 221 201-428 57-304 (413)
290 PRK05367 glycine dehydrogenase 99.6 9.4E-13 2E-17 152.5 28.1 289 211-540 543-871 (954)
291 PRK06058 4-aminobutyrate amino 99.6 2.5E-12 5.4E-17 139.0 29.6 289 206-541 95-443 (443)
292 PRK05965 hypothetical protein; 99.6 2.8E-12 6E-17 139.1 29.1 289 207-540 87-447 (459)
293 PLN02760 4-aminobutyrate:pyruv 99.6 3E-12 6.5E-17 140.1 29.4 240 207-464 130-429 (504)
294 PRK06105 aminotransferase; Pro 99.6 2E-12 4.4E-17 140.2 27.9 242 204-463 86-386 (460)
295 PRK15029 arginine decarboxylas 99.5 3E-13 6.5E-18 152.3 21.6 176 208-390 203-421 (755)
296 COG0001 HemL Glutamate-1-semia 99.5 9.6E-13 2.1E-17 137.5 23.7 222 200-426 84-341 (432)
297 PRK09221 beta alanine--pyruvat 99.5 2.8E-12 6E-17 138.6 28.1 288 207-540 89-443 (445)
298 PRK12403 putative aminotransfe 99.5 3.2E-12 6.9E-17 138.7 28.6 235 208-463 96-389 (460)
299 PRK05367 glycine dehydrogenase 99.5 1.9E-12 4.1E-17 150.1 28.2 159 212-380 123-292 (954)
300 TIGR03799 NOD_PanD_pyr putativ 99.5 5.3E-12 1.2E-16 138.3 30.2 203 228-436 162-428 (522)
301 PF00464 SHMT: Serine hydroxym 99.5 3.1E-13 6.7E-18 142.1 19.5 239 216-477 72-355 (399)
302 PRK13237 tyrosine phenol-lyase 99.5 1E-12 2.2E-17 139.7 23.0 214 203-427 73-335 (460)
303 PLN02880 tyrosine decarboxylas 99.5 3.6E-12 7.8E-17 139.1 27.9 230 212-464 124-419 (490)
304 PRK09264 diaminobutyrate--2-ox 99.5 3.3E-12 7.2E-17 137.4 27.2 288 207-539 79-415 (425)
305 PRK07046 aminotransferase; Val 99.5 6.3E-12 1.4E-16 136.0 29.5 215 207-425 112-362 (453)
306 PRK13360 omega amino acid--pyr 99.5 7.9E-12 1.7E-16 135.0 29.9 288 207-540 86-440 (442)
307 PRK07678 aminotransferase; Val 99.5 1.1E-11 2.3E-16 134.4 30.5 294 206-541 85-450 (451)
308 PRK06541 hypothetical protein; 99.5 7.8E-12 1.7E-16 135.6 29.2 240 206-463 91-386 (460)
309 PRK07482 hypothetical protein; 99.5 1.5E-11 3.2E-16 133.6 31.3 238 205-463 89-389 (461)
310 PRK06943 adenosylmethionine--8 99.5 5.7E-12 1.2E-16 136.4 28.0 289 206-540 93-446 (453)
311 PRK12389 glutamate-1-semialdeh 99.5 1.2E-11 2.7E-16 133.1 30.4 215 207-425 90-339 (428)
312 PRK06082 4-aminobutyrate amino 99.5 5.1E-12 1.1E-16 137.0 27.6 291 202-540 105-451 (459)
313 PLN02414 glycine dehydrogenase 99.5 3E-12 6.5E-17 148.0 27.1 163 211-380 149-320 (993)
314 TIGR00709 dat 2,4-diaminobutyr 99.5 1E-11 2.2E-16 134.2 29.5 232 207-463 79-366 (442)
315 PLN02590 probable tyrosine dec 99.5 1.3E-11 2.8E-16 135.4 30.5 243 203-464 159-467 (539)
316 PRK07986 adenosylmethionine--8 99.5 4.9E-12 1.1E-16 135.9 26.1 288 206-540 82-423 (428)
317 PRK06918 4-aminobutyrate amino 99.5 1.4E-11 3E-16 133.5 29.8 287 206-539 93-442 (451)
318 PRK06173 adenosylmethionine--8 99.5 4.6E-12 9.9E-17 136.2 25.3 287 206-540 83-425 (429)
319 PRK06062 hypothetical protein; 99.5 1.2E-11 2.5E-16 134.0 28.2 203 202-407 87-334 (451)
320 KOG1357 Serine palmitoyltransf 99.5 1.6E-13 3.5E-18 141.4 13.0 211 209-427 181-424 (519)
321 KOG2862 Alanine-glyoxylate ami 99.5 1.9E-11 4.2E-16 121.1 26.7 213 212-428 52-302 (385)
322 PRK05639 4-aminobutyrate amino 99.5 2.9E-11 6.3E-16 131.0 30.8 284 208-539 94-442 (457)
323 PRK07481 hypothetical protein; 99.5 1.7E-11 3.8E-16 132.6 28.8 289 207-540 83-445 (449)
324 PRK05769 4-aminobutyrate amino 99.5 3.8E-11 8.1E-16 129.7 31.0 252 206-481 93-403 (441)
325 PRK05630 adenosylmethionine--8 99.5 7.4E-12 1.6E-16 134.4 25.3 257 206-482 79-386 (422)
326 TIGR00461 gcvP glycine dehydro 99.5 5.4E-12 1.2E-16 144.3 25.0 212 212-428 532-786 (939)
327 PRK13578 ornithine decarboxyla 99.5 1.6E-12 3.4E-17 145.2 20.1 176 208-390 172-395 (720)
328 COG0161 BioA Adenosylmethionin 99.5 9.4E-12 2E-16 131.5 24.5 292 203-540 81-443 (449)
329 PRK06938 diaminobutyrate--2-ox 99.5 2.9E-11 6.3E-16 131.2 29.0 233 206-463 102-391 (464)
330 PRK07480 putative aminotransfe 99.5 1.7E-11 3.7E-16 132.8 26.8 240 206-463 90-385 (456)
331 PLN02482 glutamate-1-semialdeh 99.5 1.8E-11 3.9E-16 132.9 26.9 215 208-426 137-386 (474)
332 PLN02263 serine decarboxylase 99.5 4.9E-11 1.1E-15 128.0 29.7 230 200-436 120-389 (470)
333 PRK08742 adenosylmethionine--8 99.5 1.2E-11 2.6E-16 134.4 25.3 241 206-463 103-404 (472)
334 PRK12566 glycine dehydrogenase 99.5 1.8E-11 3.9E-16 139.4 26.9 148 211-362 544-709 (954)
335 PRK07036 hypothetical protein; 99.5 4.4E-11 9.6E-16 130.0 28.6 239 207-463 92-389 (466)
336 PRK06149 hypothetical protein; 99.4 9.3E-11 2E-15 137.9 33.1 288 204-540 618-970 (972)
337 PRK00615 glutamate-1-semialdeh 99.4 3.7E-11 8E-16 129.3 26.4 215 207-425 90-340 (433)
338 PRK06916 adenosylmethionine--8 99.4 2.6E-11 5.7E-16 131.6 25.4 239 207-463 96-392 (460)
339 PF00202 Aminotran_3: Aminotra 99.4 6.4E-12 1.4E-16 131.2 19.9 237 205-463 54-338 (339)
340 PRK07030 adenosylmethionine--8 99.4 4.2E-11 9E-16 130.1 26.5 240 206-463 86-383 (466)
341 COG0076 GadB Glutamate decarbo 99.4 2E-11 4.3E-16 131.7 23.6 229 212-464 103-381 (460)
342 COG3977 Alanine-alpha-ketoisov 99.4 2.2E-11 4.8E-16 120.0 21.4 295 210-539 78-410 (417)
343 TIGR03251 LAT_fam L-lysine 6-t 99.4 5.9E-11 1.3E-15 127.9 26.6 288 206-541 81-431 (431)
344 PRK06931 diaminobutyrate--2-ox 99.4 1.9E-10 4.1E-15 124.8 30.0 233 206-463 97-385 (459)
345 PF03841 SelA: L-seryl-tRNA se 99.4 4.3E-13 9.3E-18 137.7 8.9 165 214-384 51-237 (367)
346 PRK07483 hypothetical protein; 99.4 5.6E-11 1.2E-15 128.4 24.9 293 207-540 70-437 (443)
347 COG4100 Cystathionine beta-lya 99.4 4.9E-11 1.1E-15 117.6 21.7 178 200-381 58-257 (416)
348 PRK06917 hypothetical protein; 99.4 4.8E-10 1E-14 121.3 31.3 294 206-540 70-437 (447)
349 PRK15400 lysine decarboxylase 99.4 4.1E-11 8.8E-16 133.9 23.1 173 208-389 193-398 (714)
350 PRK06148 hypothetical protein; 99.4 3.3E-10 7.2E-15 133.5 31.6 288 205-540 658-1010(1013)
351 TIGR00508 bioA adenosylmethion 99.4 4.5E-10 9.7E-15 120.9 28.9 257 206-481 84-391 (427)
352 PRK08297 L-lysine aminotransfe 99.3 2.1E-10 4.7E-15 123.9 24.2 255 206-482 88-406 (443)
353 PRK15399 lysine decarboxylase 99.3 8.1E-11 1.8E-15 131.5 21.2 171 209-389 194-398 (713)
354 KOG1402 Ornithine aminotransfe 99.3 3.8E-10 8.2E-15 112.7 23.3 252 209-480 100-390 (427)
355 PF12897 Aminotran_MocR: Alani 99.3 1.2E-09 2.5E-14 112.1 27.2 283 210-535 69-407 (425)
356 PF00282 Pyridoxal_deC: Pyrido 99.3 9.6E-11 2.1E-15 123.8 19.8 223 208-436 73-363 (373)
357 PLN02974 adenosylmethionine-8- 99.3 1.2E-09 2.6E-14 125.1 29.4 238 206-464 405-758 (817)
358 KOG1404 Alanine-glyoxylate ami 99.3 3.4E-10 7.4E-15 115.5 21.9 261 202-488 84-407 (442)
359 COG3844 Kynureninase [Amino ac 99.3 3.8E-10 8.2E-15 112.7 21.0 161 212-373 78-244 (407)
360 TIGR00699 GABAtrns_euk 4-amino 99.3 6E-10 1.3E-14 120.6 23.8 278 207-540 98-462 (464)
361 COG1921 SelA Selenocysteine sy 99.3 1.5E-10 3.2E-15 120.0 17.4 183 214-405 72-268 (395)
362 TIGR01365 serC_2 phosphoserine 99.3 1.4E-09 2.9E-14 114.8 25.0 249 210-486 39-338 (374)
363 TIGR02617 tnaA_trp_ase tryptop 99.3 3E-10 6.6E-15 119.8 19.6 238 178-427 46-344 (467)
364 COG1982 LdcC Arginine/lysine/o 99.2 1.4E-09 3E-14 117.5 23.0 157 210-373 70-246 (557)
365 TIGR00461 gcvP glycine dehydro 99.2 1.6E-09 3.4E-14 124.4 24.7 162 212-380 111-280 (939)
366 COG0403 GcvP Glycine cleavage 99.2 1.4E-08 3.1E-13 105.2 28.2 161 213-378 123-295 (450)
367 PRK06209 glutamate-1-semialdeh 99.2 3.3E-09 7.1E-14 114.4 24.6 211 210-425 88-327 (431)
368 KOG1358 Serine palmitoyltransf 99.2 6.4E-10 1.4E-14 113.4 17.3 182 211-400 140-345 (467)
369 PLN02452 phosphoserine transam 99.2 5.4E-09 1.2E-13 110.1 23.8 244 210-483 52-327 (365)
370 PF02347 GDC-P: Glycine cleava 99.2 4.9E-09 1.1E-13 111.1 23.0 210 211-427 111-364 (429)
371 KOG1401 Acetylornithine aminot 99.1 7.8E-09 1.7E-13 106.4 22.3 220 201-424 89-345 (433)
372 TIGR03811 tyr_de_CO2_Ent tyros 99.0 1.1E-06 2.3E-11 97.9 33.7 219 203-427 116-475 (608)
373 PRK12462 phosphoserine aminotr 98.9 3.8E-07 8.2E-12 95.7 26.0 241 211-481 50-324 (364)
374 PRK12566 glycine dehydrogenase 98.9 2.7E-07 5.7E-12 105.8 23.8 157 212-380 126-294 (954)
375 KOG2467 Glycine/serine hydroxy 98.9 4.8E-07 1E-11 92.0 22.6 255 200-477 70-376 (477)
376 COG1448 TyrB Aspartate/tyrosin 98.9 2E-06 4.4E-11 88.4 26.5 214 210-427 69-332 (396)
377 COG1003 GcvP Glycine cleavage 98.7 9E-07 2E-11 92.0 19.0 144 211-360 110-270 (496)
378 PF04864 Alliinase_C: Allinase 98.6 2.2E-06 4.8E-11 87.3 18.7 272 211-524 44-347 (363)
379 KOG0258 Alanine aminotransfera 98.6 2.3E-05 5.1E-10 80.6 24.5 165 203-370 105-309 (475)
380 KOG0628 Aromatic-L-amino-acid/ 98.6 1E-05 2.2E-10 84.9 21.3 265 192-478 91-427 (511)
381 KOG1403 Predicted alanine-glyo 98.4 4.9E-06 1.1E-10 82.7 14.1 291 205-539 81-436 (452)
382 KOG1383 Glutamate decarboxylas 98.4 1.5E-05 3.3E-10 83.7 18.3 279 214-541 124-447 (491)
383 PF05889 SLA_LP_auto_ag: Solub 98.1 4.1E-05 8.9E-10 80.0 13.4 156 221-382 67-247 (389)
384 KOG1405 4-aminobutyrate aminot 97.9 0.00018 4E-09 73.3 13.1 178 285-488 255-452 (484)
385 KOG3846 L-kynurenine hydrolase 97.8 0.0032 6.9E-08 63.3 19.3 161 214-374 115-293 (465)
386 KOG2040 Glycine dehydrogenase 97.7 0.001 2.2E-08 72.5 15.8 145 211-360 583-746 (1001)
387 KOG0629 Glutamate decarboxylas 97.7 0.00083 1.8E-08 70.2 14.5 211 217-433 148-419 (510)
388 COG1932 SerC Phosphoserine ami 97.6 0.011 2.5E-07 61.0 20.3 237 211-480 51-324 (365)
389 KOG1412 Aspartate aminotransfe 97.5 0.022 4.8E-07 57.6 20.8 197 170-381 45-279 (410)
390 KOG2040 Glycine dehydrogenase 97.5 0.017 3.7E-07 63.3 20.9 138 215-358 168-309 (1001)
391 COG3033 TnaA Tryptophanase [Am 97.1 0.014 2.9E-07 60.2 15.2 216 203-427 74-346 (471)
392 KOG1411 Aspartate aminotransfe 96.0 0.36 7.7E-06 49.8 16.4 240 182-427 69-359 (427)
393 PLN02994 1-aminocyclopropane-1 96.0 0.02 4.4E-07 52.9 6.9 50 212-261 94-153 (153)
394 KOG3843 Predicted serine hydro 93.5 0.34 7.3E-06 48.2 8.3 163 214-384 61-251 (432)
395 PF02310 B12-binding: B12 bind 85.5 2.1 4.6E-05 37.1 5.9 89 263-353 17-110 (121)
396 cd02067 B12-binding B12 bindin 79.0 10 0.00022 33.0 7.7 89 264-354 17-109 (119)
397 PF01596 Methyltransf_3: O-met 66.0 29 0.00062 33.7 8.1 124 208-337 29-159 (205)
398 cd00532 MGS-like MGS-like doma 64.5 29 0.00063 29.9 7.1 83 242-333 18-106 (112)
399 PF05368 NmrA: NmrA-like famil 64.4 35 0.00075 33.0 8.5 60 269-330 39-98 (233)
400 PLN02476 O-methyltransferase 60.4 68 0.0015 32.7 9.9 123 208-336 102-231 (278)
401 PRK13396 3-deoxy-7-phosphohept 59.4 90 0.002 32.9 10.8 44 296-339 236-284 (352)
402 PRK13397 3-deoxy-7-phosphohept 59.4 1.7E+02 0.0037 29.3 12.3 43 296-338 150-196 (250)
403 cd02068 radical_SAM_B12_BD B12 57.4 43 0.00092 29.3 7.1 83 267-352 9-95 (127)
404 TIGR02026 BchE magnesium-proto 56.0 29 0.00063 38.3 7.0 85 266-353 28-121 (497)
405 PRK05096 guanosine 5'-monophos 55.9 2.7E+02 0.0058 29.3 14.1 133 228-363 98-249 (346)
406 COG1066 Sms Predicted ATP-depe 55.9 1.4E+02 0.0029 32.3 11.3 85 244-331 116-215 (456)
407 TIGR01305 GMP_reduct_1 guanosi 54.0 1.7E+02 0.0038 30.6 11.6 124 228-352 97-239 (343)
408 COG1606 ATP-utilizing enzymes 53.6 57 0.0012 32.7 7.7 111 214-336 6-123 (269)
409 KOG1663 O-methyltransferase [S 53.4 1.7E+02 0.0038 28.9 10.9 120 208-334 57-184 (237)
410 PLN02589 caffeoyl-CoA O-methyl 52.0 2.1E+02 0.0045 28.6 11.6 123 209-337 64-194 (247)
411 cd01078 NAD_bind_H4MPT_DH NADP 50.7 1.8E+02 0.0039 27.3 10.7 104 227-339 30-134 (194)
412 COG0552 FtsY Signal recognitio 49.5 85 0.0018 32.8 8.5 131 236-372 154-305 (340)
413 cd04736 MDH_FMN Mandelate dehy 47.7 68 0.0015 34.0 7.8 81 271-352 233-316 (361)
414 cd05013 SIS_RpiR RpiR-like pro 46.8 1.6E+02 0.0034 25.3 9.1 30 297-330 62-91 (139)
415 PF13460 NAD_binding_10: NADH( 45.9 99 0.0021 28.3 8.0 84 233-327 7-90 (183)
416 cd02071 MM_CoA_mut_B12_BD meth 45.7 82 0.0018 27.5 6.9 69 263-333 16-88 (122)
417 COG0036 Rpe Pentose-5-phosphat 45.4 2.5E+02 0.0055 27.6 10.6 127 241-384 76-214 (220)
418 PLN02781 Probable caffeoyl-CoA 45.0 3.1E+02 0.0067 26.9 12.0 122 209-336 53-181 (234)
419 TIGR00511 ribulose_e2b2 ribose 44.6 2E+02 0.0043 29.6 10.5 103 222-331 112-222 (301)
420 PRK05234 mgsA methylglyoxal sy 44.6 1E+02 0.0022 28.1 7.4 47 286-333 65-113 (142)
421 CHL00200 trpA tryptophan synth 43.6 1.2E+02 0.0025 30.7 8.4 89 242-332 112-208 (263)
422 PRK08535 translation initiatio 43.3 2E+02 0.0044 29.7 10.4 103 222-331 117-227 (310)
423 PRK12595 bifunctional 3-deoxy- 43.0 1.8E+02 0.004 30.7 10.2 69 270-338 221-299 (360)
424 TIGR00640 acid_CoA_mut_C methy 42.9 1.1E+02 0.0024 27.4 7.4 72 258-331 14-89 (132)
425 TIGR03573 WbuX N-acetyl sugar 41.8 1.4E+02 0.003 31.3 9.1 116 213-335 43-169 (343)
426 PRK08883 ribulose-phosphate 3- 41.7 1.1E+02 0.0024 29.9 7.8 80 270-352 102-193 (220)
427 TIGR00524 eIF-2B_rel eIF-2B al 41.7 2.5E+02 0.0055 28.9 10.7 88 241-332 142-237 (303)
428 cd01422 MGS Methylglyoxal synt 41.2 1.7E+02 0.0036 25.4 8.1 45 286-331 60-106 (115)
429 PRK08335 translation initiatio 41.1 2.6E+02 0.0057 28.4 10.5 104 220-331 104-216 (275)
430 COG2099 CobK Precorrin-6x redu 40.3 83 0.0018 31.5 6.6 93 229-331 5-98 (257)
431 TIGR00262 trpA tryptophan synt 40.1 1.7E+02 0.0036 29.4 8.9 89 242-332 108-204 (256)
432 PRK05567 inosine 5'-monophosph 38.5 98 0.0021 34.1 7.6 110 242-352 233-358 (486)
433 PRK08091 ribulose-phosphate 3- 38.2 2.6E+02 0.0057 27.6 9.8 69 281-352 127-205 (228)
434 cd04726 KGPDC_HPS 3-Keto-L-gul 37.5 2.4E+02 0.0053 26.5 9.4 105 245-352 73-184 (202)
435 PF14258 DUF4350: Domain of un 36.5 1.6E+02 0.0034 22.8 6.6 59 268-332 12-70 (70)
436 cd04795 SIS SIS domain. SIS (S 35.7 1.6E+02 0.0035 23.1 6.8 53 274-331 25-79 (87)
437 COG1954 GlpP Glycerol-3-phosph 35.6 55 0.0012 30.8 4.2 47 284-336 12-60 (181)
438 COG1184 GCD2 Translation initi 35.2 4.1E+02 0.0089 27.4 10.8 103 222-331 116-226 (301)
439 cd02070 corrinoid_protein_B12- 34.9 2.9E+02 0.0063 26.3 9.5 88 263-354 99-191 (201)
440 cd02065 B12-binding_like B12 b 34.5 2.6E+02 0.0056 23.7 8.4 84 264-352 17-103 (125)
441 PF07085 DRTGG: DRTGG domain; 34.0 96 0.0021 26.2 5.3 46 279-331 45-90 (105)
442 smart00851 MGS MGS-like domain 33.7 1.6E+02 0.0034 24.1 6.4 43 286-330 45-89 (90)
443 PF03435 Saccharop_dh: Sacchar 33.4 2E+02 0.0043 30.4 8.8 93 229-332 2-96 (386)
444 PRK02261 methylaspartate mutas 33.4 1.4E+02 0.0031 26.8 6.6 61 263-325 20-81 (137)
445 PLN02274 inosine-5'-monophosph 32.9 2E+02 0.0044 31.9 8.9 109 243-352 254-378 (505)
446 PLN02591 tryptophan synthase 32.8 3E+02 0.0064 27.6 9.3 91 239-331 96-194 (250)
447 PF01008 IF-2B: Initiation fac 32.8 1.9E+02 0.0042 29.0 8.3 101 226-332 108-216 (282)
448 TIGR00715 precor6x_red precorr 32.6 1.4E+02 0.0031 30.0 7.0 92 229-330 3-96 (256)
449 PF10087 DUF2325: Uncharacteri 31.8 1.3E+02 0.0029 25.0 5.8 60 266-332 15-81 (97)
450 TIGR03649 ergot_EASG ergot alk 31.4 2E+02 0.0043 28.5 8.1 53 274-327 40-97 (285)
451 COG0296 GlgB 1,4-alpha-glucan 31.2 43 0.00093 38.0 3.3 34 304-337 205-238 (628)
452 PTZ00314 inosine-5'-monophosph 31.0 1.9E+02 0.0041 32.0 8.3 111 241-352 245-371 (495)
453 COG0159 TrpA Tryptophan syntha 30.6 3.1E+02 0.0067 27.8 8.9 17 367-383 210-226 (265)
454 cd07018 S49_SppA_67K_type Sign 30.5 2E+02 0.0043 28.0 7.6 37 286-323 36-72 (222)
455 cd01121 Sms Sms (bacterial rad 30.5 2.5E+02 0.0054 29.9 8.8 53 279-331 141-205 (372)
456 PF02142 MGS: MGS-like domain 30.4 24 0.00053 29.4 1.0 42 288-330 52-94 (95)
457 COG1058 CinA Predicted nucleot 29.7 1.1E+02 0.0024 30.8 5.6 84 247-334 8-95 (255)
458 PRK08745 ribulose-phosphate 3- 29.5 4E+02 0.0086 26.2 9.4 80 270-352 106-197 (223)
459 smart00642 Aamy Alpha-amylase 29.5 49 0.0011 30.8 3.0 29 308-336 65-93 (166)
460 cd00150 PlantTI Plant trypsin 29.4 25 0.00054 22.4 0.6 15 8-30 1-15 (27)
461 cd00381 IMPDH IMPDH: The catal 29.1 6.7E+02 0.014 26.0 13.9 137 213-352 70-224 (325)
462 COG2870 RfaE ADP-heptose synth 29.1 82 0.0018 33.8 4.7 45 286-334 135-179 (467)
463 cd01424 MGS_CPS_II Methylglyox 28.9 2.8E+02 0.006 23.5 7.4 86 237-332 14-101 (110)
464 cd01018 ZntC Metal binding pro 28.7 2.4E+02 0.0053 28.1 8.1 70 248-331 169-245 (266)
465 PRK06843 inosine 5-monophospha 28.6 2.3E+02 0.0049 30.6 8.1 111 241-352 157-283 (404)
466 COG0514 RecQ Superfamily II DN 28.3 2.7E+02 0.0057 31.6 8.8 99 226-335 34-141 (590)
467 TIGR01501 MthylAspMutase methy 28.3 1.7E+02 0.0036 26.4 6.0 66 259-326 14-80 (134)
468 cd01017 AdcA Metal binding pro 28.1 2.2E+02 0.0048 28.7 7.7 69 248-330 170-247 (282)
469 cd02072 Glm_B12_BD B12 binding 28.0 1.8E+02 0.0038 26.1 6.1 62 263-326 16-78 (128)
470 cd01137 PsaA Metal binding pro 27.9 1.5E+02 0.0032 30.1 6.4 67 249-329 177-252 (287)
471 COG1587 HemD Uroporphyrinogen- 27.7 4.1E+02 0.0089 26.1 9.4 113 215-337 41-157 (248)
472 PRK13307 bifunctional formalde 27.7 4.8E+02 0.01 28.0 10.3 83 268-352 270-356 (391)
473 COG1091 RfbD dTDP-4-dehydrorha 27.2 2.4E+02 0.0051 28.9 7.5 52 280-331 34-97 (281)
474 PRK02705 murD UDP-N-acetylmura 27.0 3.4E+02 0.0074 29.2 9.5 75 228-306 3-77 (459)
475 TIGR00649 MG423 conserved hypo 26.6 3.2E+02 0.007 29.3 9.1 76 247-327 317-401 (422)
476 PRK06372 translation initiatio 26.5 6.7E+02 0.015 25.2 10.6 97 227-331 88-190 (253)
477 PF08423 Rad51: Rad51; InterP 26.4 1.6E+02 0.0035 29.4 6.2 39 295-333 132-185 (256)
478 TIGR00160 MGSA methylglyoxal s 26.3 1.1E+02 0.0024 27.9 4.5 49 286-334 63-112 (143)
479 TIGR01470 cysG_Nterm siroheme 26.1 5.9E+02 0.013 24.4 10.9 92 226-334 10-103 (205)
480 PF00834 Ribul_P_3_epim: Ribul 26.0 1.5E+02 0.0032 28.6 5.7 81 270-353 101-193 (201)
481 PF13407 Peripla_BP_4: Peripla 25.8 1.2E+02 0.0026 29.3 5.3 62 264-331 18-85 (257)
482 COG0616 SppA Periplasmic serin 25.8 2.2E+02 0.0049 29.4 7.4 87 288-382 89-179 (317)
483 PRK11889 flhF flagellar biosyn 25.7 6.2E+02 0.013 27.5 10.5 90 245-336 265-363 (436)
484 PF07279 DUF1442: Protein of u 25.6 6.1E+02 0.013 24.9 9.7 121 207-336 24-152 (218)
485 COG1087 GalE UDP-glucose 4-epi 25.6 3.7E+02 0.0081 27.9 8.5 97 228-328 2-111 (329)
486 PF03652 UPF0081: Uncharacteri 25.3 1.1E+02 0.0023 27.6 4.3 56 283-338 38-100 (135)
487 COG1737 RpiR Transcriptional r 25.2 5.5E+02 0.012 25.9 10.0 43 308-354 186-228 (281)
488 COG1748 LYS9 Saccharopine dehy 25.1 4.4E+02 0.0095 28.3 9.4 107 227-338 3-128 (389)
489 PRK12724 flagellar biosynthesi 25.0 3.2E+02 0.007 29.7 8.5 99 237-337 240-346 (432)
490 PRK14057 epimerase; Provisiona 25.0 4.6E+02 0.0099 26.4 9.0 69 281-352 141-219 (254)
491 PLN02672 methionine S-methyltr 24.9 3.7E+02 0.008 32.9 9.7 117 211-334 427-565 (1082)
492 PF00128 Alpha-amylase: Alpha 24.9 52 0.0011 32.7 2.4 63 269-335 12-74 (316)
493 KOG4589 Cell division protein 24.9 3.6E+02 0.0078 26.1 7.7 42 283-324 120-165 (232)
494 PF01408 GFO_IDH_MocA: Oxidore 24.8 1.4E+02 0.0029 25.4 4.8 31 299-331 88-118 (120)
495 PRK07807 inosine 5-monophospha 24.7 2.8E+02 0.0061 30.6 8.2 112 240-352 230-357 (479)
496 PRK00414 gmhA phosphoheptose i 24.6 4.3E+02 0.0093 25.1 8.6 42 308-353 120-161 (192)
497 PF15608 PELOTA_1: PELOTA RNA 24.4 2.3E+02 0.005 24.2 5.8 65 264-334 23-88 (100)
498 KOG3974 Predicted sugar kinase 24.4 3.3E+02 0.0071 27.6 7.6 46 284-334 91-140 (306)
499 PF03279 Lip_A_acyltrans: Bact 24.4 6.4E+02 0.014 25.3 10.4 20 315-334 181-201 (295)
500 KOG2741 Dimeric dihydrodiol de 24.3 1.6E+02 0.0034 31.0 5.7 73 258-339 60-135 (351)
No 1
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=5.5e-78 Score=626.06 Aligned_cols=387 Identities=43% Similarity=0.708 Sum_probs=363.7
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
++.|+++|.|...+ ..+++++||||+||||.|++.++..+.+.....+|.|+|++||+.+.||+++++++|++.++.|
T Consensus 7 ~~~T~~v~~g~~~~--~~~gav~~PI~~tStf~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~lE~~~a~LEg~~~~~af 84 (396)
T COG0626 7 SLTTRLVHAGRRPD--DLTGAVNPPIYLTSTFVFDSAGEGLDAFAGEEGGYDYSRTGNPTRDALEEALAELEGGEDAFAF 84 (396)
T ss_pred ccceeeEEcccccc--cCCCcccCCeeeeeeecccChhhhhhhccccccCcccccCCCccHHHHHHHHHHhhCCCcEEEe
Confidence 57899999997653 4689999999999999999998876666666778999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+|||+||.+++.+++++||+|++++..|++++.++...++++|+++.++|..+.+++++++.+.+|++||+|+|+||+..
T Consensus 85 sSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~ 164 (396)
T COG0626 85 SSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLLE 164 (396)
T ss_pred cCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999988888888877435999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhh-hcCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHH-VLGG 389 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~-~~G~ 389 (541)
+.||++|+++|+++|+++||||||++|+.++|+++|+|||++|+|||++||+|+++|+++++. ++.+.+....+ .+|.
T Consensus 165 v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~ 244 (396)
T COG0626 165 VPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGA 244 (396)
T ss_pred cccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999888655 45555544444 5999
Q ss_pred CchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHH
Q 009167 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 469 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~ 469 (541)
.++|+++|+++|+++||..||+++++|+..+++||++||.|++|+||++++||+|++++||++|+|+|+||+++++ +.+
T Consensus 245 ~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-~~~ 323 (396)
T COG0626 245 VLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-EAA 323 (396)
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-HHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987 889
Q ss_pred HHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
.+|+++|+++.+++||||++|++++|+.++|..++.+.+.+.|+.+++||||||+|+.+|||+||++||+++
T Consensus 324 ~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 324 KKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGLEDVEDLIADLEQALAKA 395 (396)
T ss_pred HHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864
No 2
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=2.9e-75 Score=612.24 Aligned_cols=383 Identities=45% Similarity=0.772 Sum_probs=342.3
Q ss_pred cccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeCC
Q 009167 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 233 (541)
Q Consensus 154 ~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sS 233 (541)
+|++||+|...++ ..+++++||||+|+||.|++.+++ +.+.+...+|.|+|++||+...||++||+++|++.+++++|
T Consensus 1 ~T~~vh~g~~~~~-~~~~~v~~pi~~sstf~~~~~~~~-~~~~~~~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~S 78 (386)
T PF01053_consen 1 ETLLVHAGRDPDE-DQTGAVNPPIYQSSTFVFDSAEEL-DAFAGEEKGYIYSRYGNPTVRALEQRLAALEGGEDALLFSS 78 (386)
T ss_dssp HHHHHHTTTTGGT-STTTBSS--B---SBBBBSSHHHH-HHHTTSSSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEESS
T ss_pred CcceEeCCCCCCC-CCCCCeeCCccccccCcccchHHH-HhhcCCCCCcceeccccccHHHHHHHHHHhhcccceeeccc
Confidence 4899999987642 358999999999999999999998 77777788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccc
Q 009167 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 313 (541)
Q Consensus 234 Gs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~ 313 (541)
||+|+.+++.+++++||+|++++..|++++.+++..+.++|+++.++|..|+++|++++++ +|++||+|+|+||++.+.
T Consensus 79 GmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~ 157 (386)
T PF01053_consen 79 GMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRP-NTKLVFLESPSNPTLEVP 157 (386)
T ss_dssp HHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCT-TEEEEEEESSBTTTTB--
T ss_pred hHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhccc-cceEEEEEcCCCcccccc
Confidence 9999999999999999999999999999999999889999999999999999999999998 599999999999999999
Q ss_pred cHHHHHHHHHhCC-CEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh--HHHHHHHHHhhhcCCC
Q 009167 314 DVKLVSDLCHKKG-AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRNLHHVLGGA 390 (541)
Q Consensus 314 dl~~Ia~la~~~g-i~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~--~li~~l~~~~~~~G~~ 390 (541)
|+++|+++||++| +++|||+|+++++.++|+.+|+|++++|+|||++||+|+++|+++.++ ++.++++.....+|..
T Consensus 158 Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~ 237 (386)
T PF01053_consen 158 DLEAIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGAT 237 (386)
T ss_dssp -HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B
T ss_pred cHHHHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCcc
Confidence 9999999999998 999999999999999999999999999999999999999999999764 7888899888999999
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~ 470 (541)
++|+++|+++++++|+..|++++.+|+++++++|++||.|++|+||++++||+|+++++|++|+|+|++|+++++.+.+.
T Consensus 238 ~~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~ 317 (386)
T PF01053_consen 238 LSPFDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAAR 317 (386)
T ss_dssp --HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHH
T ss_pred chHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997656899
Q ss_pred HHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
+|+++|+++.+++|||+++|++++|+.++|..++++++.+.|+.+++||||||+||++|||+||++||+
T Consensus 318 ~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 318 RFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLEDPDDLIADLEQALE 386 (386)
T ss_dssp HHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHHH
T ss_pred hHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEeccCCHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999996
No 3
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-75 Score=581.18 Aligned_cols=386 Identities=38% Similarity=0.619 Sum_probs=365.5
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|++||+|+. + +.+++...|||+|++|.|++.++..+.|+.+..++.|+|..||+.+.||++||.++|+-.++.+
T Consensus 7 ~f~T~~vHag~~-d--~~t~ara~PIyqtTsy~F~d~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~ 83 (426)
T COG2873 7 GFETLAVHAGQE-D--PTTGARAVPIYQTTSYVFDDTDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAV 83 (426)
T ss_pred CcchhhhcCCCC-C--CCCCceecceeeeeeeecCCHHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcchhhhhh
Confidence 699999999987 3 4689999999999999999999999999988889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
.|||+|+..++..++++||+|+.+...|++++.++...++++|++++++|.+|++.++++|++ +||+||+|+..||-+.
T Consensus 84 aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~-nTkavf~EtigNP~~~ 162 (426)
T COG2873 84 ASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDE-NTKAVFAETIGNPGLD 162 (426)
T ss_pred ccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCc-ccceEEEEeccCCCcc
Confidence 999999999999999999999999999999999998889999999999999999999999998 4999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh--HH-------------
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KL------------- 376 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~--~l------------- 376 (541)
+.|+++|+++||++|+++|||+|+++++.++|+++|+|||++|+|||+||||..+||+++-.. +|
T Consensus 163 v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~ 242 (426)
T COG2873 163 VLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPD 242 (426)
T ss_pred ccCHHHHHHHHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999997421 11
Q ss_pred --------HH---------HHH-HHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009167 377 --------VT---------QIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (541)
Q Consensus 377 --------i~---------~l~-~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l 438 (541)
.+ +.| ...+.+|.+++|+.+|+.+.+++||.+||+|+++|+.++++||++||+|.+|+||+|
T Consensus 243 p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL 322 (426)
T COG2873 243 PSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGL 322 (426)
T ss_pred ccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCC
Confidence 11 222 345678999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhhc-cCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009167 439 KSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 517 (541)
Q Consensus 439 ~s~p~~~l~~~~~-~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~ 517 (541)
++||.|.+++|++ +|.|++++|+++++.+...+|+++|+++....+.|++.|+++||++++|+.++++++.++|+.+++
T Consensus 323 ~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~ 402 (426)
T COG2873 323 ASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDL 402 (426)
T ss_pred CCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCc
Confidence 9999999999998 799999999999988999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHhhC
Q 009167 518 VRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 518 IRlSvG~e~~edli~dL~~AL~~i 541 (541)
||+|||+||.+|+|+||+|||+++
T Consensus 403 IRlSVGIEd~~DiiaDl~qAl~~~ 426 (426)
T COG2873 403 IRLSVGIEDIDDIIADLEQALEAA 426 (426)
T ss_pred EEEEeccCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999864
No 4
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.6e-71 Score=581.59 Aligned_cols=382 Identities=27% Similarity=0.458 Sum_probs=349.9
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhccc-CCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~-~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
++|.++|.|... ...+++++||||+|+||.|++.+++.+.+.++. .+|.|+|.+||+.+.||++||+++|++.+++|
T Consensus 6 ~~t~~~~~~~~~--~~~~~~v~~pi~~sstf~f~~~~~~~~~~~~~~~~~~~YsR~~nPt~~~le~~la~LEg~~~a~~~ 83 (395)
T PRK08114 6 LDTQLVNAGRSK--KYTQGSVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQEAMCELEGGAGCALY 83 (395)
T ss_pred cchheEeCCCCC--CCCCCCccCCeeCCCceecCCHHHHHHhhccCcCCCccccCCCChhHHHHHHHHHHHhCCCeEEEE
Confidence 679999999532 223489999999999999999998877665443 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+|||+|+.+++.+++++||+||+++..|++++.+++..++++|+++.+++..|.+++++++++ +||+|++|+|+||+|.
T Consensus 84 ~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~ 162 (395)
T PRK08114 84 PCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADIAKLIQP-NTKVVFLESPGSITME 162 (395)
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCE
Confidence 999999999999999999999999999999999988888999999999999999999999987 4999999999999999
Q ss_pred cccHHHHHHHHHhCC--CEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCC
Q 009167 312 CVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG 389 (541)
Q Consensus 312 i~dl~~Ia~la~~~g--i~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~ 389 (541)
+.|+++|+++||++| ++++||+||+.++.++|+++|+|++++|+|||++||+|+++|+++.++++++.++......|.
T Consensus 163 v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~ 242 (395)
T PRK08114 163 VHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQ 242 (395)
T ss_pred eecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccC
Confidence 999999999999984 999999999999999999999999999999999999999999998888887878877778899
Q ss_pred CchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC--CHH
Q 009167 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DLT 467 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~--~~~ 467 (541)
.++|+++|+++|+++|+..|++++++|+..+++||++||.|++|+||+|++||+|+++++|++|+|+|++|++++ +.+
T Consensus 243 ~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~ 322 (395)
T PRK08114 243 MVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDE 322 (395)
T ss_pred CCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999986 367
Q ss_pred HHHHHHHHccCcCeecccCCcccccc--cCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 468 ATIKFIDALKIPYIAPSFGGCESIVD--QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 468 ~~~~~l~~L~~~~iavS~G~~~sl~~--~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
.+.+|+++|+++.+++|||+++|+++ +|..++|.. +++ ..++.+++||||||+||++|||+||++||+++
T Consensus 323 ~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~-~~~---~~~~~~~liRlSvGlEd~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 323 QLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIR-PAG---EVDFTGTLIRLHIGLEDVDDLIADLAAGFARI 394 (395)
T ss_pred HHHHHHHhCCcceeecccCCccceeccCCchhhhccC-Chh---HhcCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 89999999999999999999999998 455555544 332 34667799999999999999999999999864
No 5
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.6e-70 Score=578.99 Aligned_cols=379 Identities=32% Similarity=0.531 Sum_probs=352.7
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|.|...+ ..+++++||||+|+||.|++.. ...+|.|+||+||+.+.|+++||+++|++.++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~--------~~~~~~Y~R~~npt~~~Le~~lA~leg~e~ivvt 74 (388)
T PRK08861 5 KPATIAVRTGIESD--SQYHAVVPPIYLSTNYGFPAFG--------EVPKYDYTRSGNPNRGLLEQTLSELESGKGAVVT 74 (388)
T ss_pred CcccceeECCCCCC--CCCCCccCCcccCcceEeCCcC--------ccCCccccCCCCchHHHHHHHHHHHhCCCeEEEE
Confidence 36799999996543 2368999999999999999742 2347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++.+.|++++.++...+...|+++.+++..|++++++++++ +|++|++|+|+||||.
T Consensus 75 ~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~i~~-~tklV~lesP~NPtG~ 153 (388)
T PRK08861 75 NCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALDAALAK-KPKLILLETPSNPLVR 153 (388)
T ss_pred CCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999998887776666677899999998899999999987 5999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~ 390 (541)
++|+++|.++|+++|+++|+|++|+.++..+++++|+|++++|+||+++||+|+++|+++++ +++.++++..+..+|..
T Consensus 154 v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~ 233 (388)
T PRK08861 154 VVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGAT 233 (388)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999888889999999999999999999999999999874 56778888888889999
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~ 470 (541)
++|+++|+++++++|+..|++++++|+..+++||++||.|.+|+||++++||+|+++++|++|+|+|++|+++++.+.+.
T Consensus 234 ~~p~~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~ 313 (388)
T PRK08861 234 GTPFDSYMTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLK 313 (388)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987678889
Q ss_pred HHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+|+++|+++.+++|||+++|++++|+.++|..++++++...|+.+++||||||+||.+|||+||++||+++
T Consensus 314 ~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE~~~dli~Dl~~al~~~ 384 (388)
T PRK08861 314 VFVKALALFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLEDAQDLIADLDQAFAKA 384 (388)
T ss_pred HHHhcCCcceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999863
No 6
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.3e-69 Score=576.69 Aligned_cols=383 Identities=30% Similarity=0.515 Sum_probs=353.1
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|.++|.|... .. +++++||||+|+||.|++.+++...+.....+|.|+|.++|++++||+.||+++|++.+++++
T Consensus 7 ~~t~~~~~g~~~--~~-~~~~~~PI~~sst~~f~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~leg~~~av~~~ 83 (432)
T PRK06702 7 KGTICVQGGYTP--KN-GEPRVLPLYQSTTYKYDTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELEGGVGAVATA 83 (432)
T ss_pred cchHheeCCCCC--CC-CCCccCCccCCcceecCCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHhCCCcEEEEC
Confidence 689999999633 22 689999999999999999988777665445678999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
|||+|+.+++.+++++||+||++.+.|+++..++...+..+|++++++|.. |+++++++|++ +||+|++|+|+||++.
T Consensus 84 SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~ 162 (432)
T PRK06702 84 SGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAESLGNPAMN 162 (432)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEcCCCcccc
Confidence 999999999999999999999999999999988877778899999999984 89999999998 5999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh----------HH-----
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG----------KL----- 376 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~----------~l----- 376 (541)
++|+++|+++|+++|+++|+|+||++++.++|+++|+||+++|+|||++||+++++|+++... ++
T Consensus 163 v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~ 242 (432)
T PRK06702 163 VLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDP 242 (432)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999988422 11
Q ss_pred ----------------HHHHH-HHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCC
Q 009167 377 ----------------VTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 439 (541)
Q Consensus 377 ----------------i~~l~-~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~ 439 (541)
+.+.+ ...+.+|..++|+.+|+++++|+++..|++++.+|+.+++++|+++|.|.+|+||+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~ 322 (432)
T PRK06702 243 SYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLD 322 (432)
T ss_pred cccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC
Confidence 11122 3455778999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhHhhhc-cCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeE
Q 009167 440 SHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 518 (541)
Q Consensus 440 s~p~~~l~~~~~-~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~I 518 (541)
+||+|+++++|| .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++.+|+.++|..++.+.++..|+++++|
T Consensus 323 ~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~li 402 (432)
T PRK06702 323 SNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLI 402 (432)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeE
Confidence 999999999999 7899999999987778889999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHh
Q 009167 519 RFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 519 RlSvG~e~~edli~dL~~AL~ 539 (541)
|||||+||.||||+||++||+
T Consensus 403 RlSvGlEd~eDLi~Dl~~Al~ 423 (432)
T PRK06702 403 RLSVGIEDVSDIIADLEAALV 423 (432)
T ss_pred EEEeccCCHHHHHHHHHHHHh
Confidence 999999999999999999997
No 7
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.8e-69 Score=570.77 Aligned_cols=382 Identities=29% Similarity=0.521 Sum_probs=349.5
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhccc-CCCccCCCCchhHHHHHHHHHHHhCCCcEEE
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~-~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~ 230 (541)
+++|+++|.|... ...+++++||||+|+||.|++.+++.+.+.+.. ..|.|+|+++|+...||++||++++++++++
T Consensus 4 ~~~t~~~~~~~~~--~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~ 81 (394)
T PRK09028 4 KKATKIVSAGRDK--KWTKGVINPPVFRASTVVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGGAGTAL 81 (394)
T ss_pred CccceeEEcCCCC--CCCCCCccCCeeCCCCcccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 3679999999433 223589999999999999999988776554332 4589999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCC
Q 009167 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (541)
Q Consensus 231 ~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG 310 (541)
++||++|+.+++.+++++||+||++++.|+++..++...++++|+++.+++..+.+++++++++ +||+|++|+|+||+|
T Consensus 82 ~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l~~-~TklV~lespsNPtg 160 (394)
T PRK09028 82 YPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELIRP-NTKVLFLESPGSITM 160 (394)
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCC
Confidence 9999999999999999999999999999999988777777889999999988888999999987 599999999999999
Q ss_pred ccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCC
Q 009167 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 311 ~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~ 390 (541)
.+.|+++|+++||++|+++++|++|+.++.++|+++|+|++++|+|||++||+|+++|+++.++++.++++......|..
T Consensus 161 ~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~ 240 (394)
T PRK09028 161 EVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQC 240 (394)
T ss_pred cHHHHHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999998899999999999999999999999999999988888888888777788999
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc-CCHHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD-GDLTAT 469 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~-~~~~~~ 469 (541)
++|+++|+++|+++|+..|++++++|+..+++||++||.|.+|+||+|++||+|+++++|++|+|+|++|+++ ++.+.+
T Consensus 241 ~~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~ 320 (394)
T PRK09028 241 TSPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAV 320 (394)
T ss_pred CCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 456788
Q ss_pred HHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.+|+++|+++.+++|||+++|++.+|+.++|... .+..|+.+++||||||+||.+|||+||++||++
T Consensus 321 ~~f~~~l~l~~~~~slG~~~sLv~~p~~~~~~~~----~~~~~~~~~liR~svGlEd~~dLi~Dl~~Al~~ 387 (394)
T PRK09028 321 TALVEGMQHFKMGFSWGGFESLILGVFGINKLRT----ATNWDFSKPLIRLHIGLEDVDDLIADLEAGFER 387 (394)
T ss_pred HHHHHhCCcceEecccCCCcceeECCCCcCccCc----hhhhcCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988776533 234778889999999999999999999999975
No 8
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-70 Score=560.00 Aligned_cols=389 Identities=43% Similarity=0.657 Sum_probs=361.8
Q ss_pred ccCCCccccccccCCcCCCCCCCCcccCCccccCccccCCh-HHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCC
Q 009167 148 SFLSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKT-AELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAE 226 (541)
Q Consensus 148 ~~~~~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~-~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e 226 (541)
++..+++|.++|+|+..+. +..++|.|||+.+.+++|++. .......+ ..+|.|+|.+||+...|++.|++++|++
T Consensus 17 ~~~~~~~t~~~~~g~~~~~-~~~~~v~~pI~~~~s~tfk~~~~~~~~~~~--~~~~~Ysr~~nPt~~~le~~iaal~ga~ 93 (409)
T KOG0053|consen 17 SRLSHLDTNLLHAGQDPEK-AIHNAVAPPIYATLSTTFKQDLNEGEHGGN--LDGYDYSRSGNPTRDVLESGIAALEGAA 93 (409)
T ss_pred hhccccchhhhhcccccch-hccccccCceecccceeecccCcccccccc--ccccccccCCCCchHHHHHHHHHHhCCc
Confidence 3446799999999987643 257899999998777887765 22211111 1259999999999999999999999999
Q ss_pred cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCC
Q 009167 227 STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (541)
Q Consensus 227 ~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~ 306 (541)
.+++++|||+|+..+++.++++|++|++.+..|++|+++++..++++|++..++|.+|++.+++++++ +|++||+|+|+
T Consensus 94 ~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~~~i~~-~t~~V~~ESPs 172 (409)
T KOG0053|consen 94 HALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKILKAIKE-NTKAVFLESPS 172 (409)
T ss_pred eEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHHHhhcc-CceEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 59999999999
Q ss_pred CCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhh
Q 009167 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHH 385 (541)
Q Consensus 307 NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~ 385 (541)
||++.+.||++|+++||++|+++|||+||++++.++++.+|+|||++|+|||++||+|+++|.++.+ +++..+++..+.
T Consensus 173 NPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~ 252 (409)
T KOG0053|consen 173 NPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQE 252 (409)
T ss_pred CCccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999996 889999999999
Q ss_pred hcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC
Q 009167 386 VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD 465 (541)
Q Consensus 386 ~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~ 465 (541)
..|+.++|+.+|+..|+++++..|++++.+|+..++++|+++|.+++|+||+|++||+|++++++++|.+|.++|.+.+.
T Consensus 253 ~lg~~~~p~~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~ 332 (409)
T KOG0053|consen 253 DLGWCEDPFDLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGN 332 (409)
T ss_pred HhcCCCCHHHHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987777688878788
Q ss_pred HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 466 LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 466 ~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
.+.+.+|+++|+++..++|+|+++||+++|+.|+|+. +.+++.+.|+.+++||+|||+|+.+||+.||.+||+++
T Consensus 333 ~~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~~mth~~-~~e~~~~~Gi~~~LVRvSVGiEd~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 333 EEHAKKFYDALKLFTKAPSLGGNESLAEPPAIMTHAS-ELEEREKFGIDPNLVRVSVGIEDIEDLIKDFQQALEKA 407 (409)
T ss_pred HHHHHHHHHhhhhhhcccCcCccchhhcchhhhccCC-CHHHHHhcCCCCCcEEEEeccCCHHHHHHHHHHHHHhh
Confidence 8899999999999999999999999999999999999 99999999999999999999999999999999999863
No 9
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=5.3e-69 Score=570.45 Aligned_cols=386 Identities=40% Similarity=0.658 Sum_probs=361.1
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|+++|++++||++||+++|++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~ 85 (398)
T PRK08249 8 GVGTKAVWAGEKEY--LPYGATQVPVVLSVAYGYDDIDEWYDVALGKKPGHIYSRNTNPTVQAFEEKVRILEGAEAATAF 85 (398)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCCHHHHHHhhcCCcCCccccCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 36799999996542 2368999999999999999998777666555567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++.++|+++...+...++..|+++.+++..|++++++++++ +|++|++|+|+||+|.
T Consensus 86 ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i~~-~tklV~ie~p~NPtg~ 164 (398)
T PRK08249 86 STGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEIAK-GCDLLYLETPTNPTLK 164 (398)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhcCC-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999887777677888999999999999999999987 5999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~ 391 (541)
++|+++|.++|+++|+++|+|++|+.++...++.+++|++++|+||+++||++.++|+++++++++++++..+...|..+
T Consensus 165 v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~ 244 (398)
T PRK08249 165 IVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATM 244 (398)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999998877777788999999999999999999999999999999999988888889999
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHH
Q 009167 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~ 471 (541)
++..+++++++++++..|++++.+|++.++++|+++|.|.+|+||+|++||+|+++++|++|+|+|++|+++++.+.+.+
T Consensus 245 s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~ 324 (398)
T PRK08249 245 DPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKR 324 (398)
T ss_pred CHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778899
Q ss_pred HHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
|+++|+++.+++|||+++|++++|+.++|..++++.++..|+.+++||||||+||.+|||+||++||++
T Consensus 325 f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 393 (398)
T PRK08249 325 LLPKLRYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGIEDTEDLIADLEQAFAH 393 (398)
T ss_pred HHHhCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999985
No 10
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.4e-68 Score=563.32 Aligned_cols=376 Identities=32% Similarity=0.545 Sum_probs=344.6
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|.++|.|...+ ..+++++||||+|+||.|++.+++.. ...+|.|+|.+||+.+.|++.|+.+++++.+++++
T Consensus 13 ~~t~~~~~~~~~~--~~~~~~~~Pi~~sst~~~~~~~~~~~----~~~~y~YsR~gnPt~~~Le~~la~le~~~~~v~~s 86 (395)
T PRK05967 13 INTRLAHDGNDPG--DYHGFVNPPVVHASTVLFPDAETMAT----RGQKYTYGTRGTPTTDALCKAIDALEGSAGTILVP 86 (395)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCChHHhhc----ccCCCccCCCCChHHHHHHHHHHHHhCCCCEEEEC
Confidence 6799999985542 24689999999999999999887642 23579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
|||+|+.+++.+++++||+||++++.|++++.++...++++|+++++++..+.+++++++++ +||+|++|+|+||++.+
T Consensus 87 SG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al~~-~TklV~lesPsNP~l~v 165 (395)
T PRK05967 87 SGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLMRP-NTKVVHTEAPGSNTFEM 165 (395)
T ss_pred cHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhcCc-CceEEEEECCCCCCCcH
Confidence 99999999999999999999999999999988887788899999999998888899999987 49999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCch
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN 392 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s 392 (541)
.|+++|+++|+++|+++|+|++|+.++.++|+++|+|++++|++||++||+|+++|+++.+++..++++......|..++
T Consensus 166 ~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~ 245 (395)
T PRK05967 166 QDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAG 245 (395)
T ss_pred HHHHHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998888887888777778899999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC----HHH
Q 009167 393 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTA 468 (541)
Q Consensus 393 ~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~----~~~ 468 (541)
|+++|+++++++|+..|++++.+|+..+++||++||.|.+|+||+|++||+|+++++|++|+|+|++|+++++ .+.
T Consensus 246 p~da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~ 325 (395)
T PRK05967 246 PDDTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAK 325 (395)
T ss_pred HHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999843 678
Q ss_pred HHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 469 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 469 ~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+.+|+++|+++.+++|||+++|+++|+ .+ +.+.+...|+.+++||||+|+||++|||+||++||+++
T Consensus 326 ~~~f~~~l~l~~~~~slG~~~sLi~~~-~~-----~~~~~~~~~~~~~liRlSvGlEd~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 326 AHAFLDALEIFGLGYSWGGYESLALHV-KL-----GDRTVAKAPYAGPVIRLQIGLEDVPDLKADLERGFAAA 392 (395)
T ss_pred HHHHHHhCCcceEccCCCCcceeeeeC-CC-----ChhHhhhccCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 899999999999999999999999874 23 33334445788899999999999999999999999863
No 11
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=7.8e-68 Score=566.03 Aligned_cols=386 Identities=35% Similarity=0.586 Sum_probs=354.9
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|.|...+ ..++++.||||+|+||.|++.+++.+.+.....+|.|+|+++|+.+.|+++||+++|++.+++++
T Consensus 9 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~leg~~~al~~~ 86 (431)
T PRK08248 9 LETLAIHAGQEID--PTTGSRAVPIYQTTSYGFRDSEHAANLFSLKEFGNIYTRIMNPTTDVFEKRIAALEGGIGALAVS 86 (431)
T ss_pred cchhheeCCcCCC--CCCCCccCCeeCCCccccCCHHHHHhhhccccCCceeECCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 5799999996542 23689999999999999999998887766555679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+..++.+++++||+|+++.+.|++++..+...++..|+++++++..|++++++++++ ++++|++++|+||||.+
T Consensus 87 sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai~~-~tklV~l~sp~NPtG~v 165 (431)
T PRK08248 87 SGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAITD-KTKALFAETIGNPKGDV 165 (431)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCCcc
Confidence 99999999999999999999999999999988887778889999999999999999999987 59999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHH----------------
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL---------------- 376 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l---------------- 376 (541)
.|+++|+++|+++|+++|+|++++.+....++++|+|++++|+||+++|||+++||+++.+.+.
T Consensus 166 ~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~ 245 (431)
T PRK08248 166 LDIEAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDP 245 (431)
T ss_pred cCHHHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCcc
Confidence 9999999999999999999999998877888889999999999999999999999988864321
Q ss_pred -----------------HHHHHHHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCC
Q 009167 377 -----------------VTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 439 (541)
Q Consensus 377 -----------------i~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~ 439 (541)
....+.....+|..++|+++|+++++++|+..|++++++|+.+++++|++||.|++|+||+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~ 325 (431)
T PRK08248 246 SYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLP 325 (431)
T ss_pred ccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC
Confidence 111223456789999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhHhhhc-cCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeE
Q 009167 440 SHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 518 (541)
Q Consensus 440 s~p~~~l~~~~~-~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~I 518 (541)
+||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|++++|..+++++++++|+++++|
T Consensus 326 s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~li 405 (431)
T PRK08248 326 SHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLV 405 (431)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeE
Confidence 999999999999 6899999999987777899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHhhC
Q 009167 519 RFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 519 RlSvG~e~~edli~dL~~AL~~i 541 (541)
|||||+||.+|||+||+|||+++
T Consensus 406 RlsvGlEd~~dL~~Dl~~Al~~~ 428 (431)
T PRK08248 406 RLSVGTEAIDDILDDLRQAIRQS 428 (431)
T ss_pred EEEeccCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999863
No 12
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=1.9e-67 Score=557.89 Aligned_cols=386 Identities=37% Similarity=0.624 Sum_probs=358.7
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+||++|+.++||++||+++|.+.+++++
T Consensus 4 ~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~av~~~ 81 (391)
T TIGR01328 4 FATRAIHAGYPPK--DQFGALTPPIYQTSTFVFDSCEQGGNRFAGQESGYIYSRLGNPTVSNLEGRIAFLEGTEAAVATS 81 (391)
T ss_pred cccceeeCCccCC--CCCCCccCCcccCcceecCChHHHHHhhcCCcCCCceeCCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 6799999995442 24689999999999999999988887776555679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+.+++.+++++||+|+++.+.|++++..+...+..+|+++.++|.+|++++++++++ +|++|++|+|+||+|.+
T Consensus 82 sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~~~i~~-~tklV~le~p~Np~G~v 160 (391)
T TIGR01328 82 SGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVKAHIKD-NTKIVYFETPANPTMKL 160 (391)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhhcc-CCeEEEEECCCCCCCcc
Confidence 99999999999999999999999999999888887778889999999999999999999987 49999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCC
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA 390 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~ 390 (541)
.|+++|.++|+++|+++|+|++|+.+....+...++|++++|++|+++++++.++|+++++++++++++... ...|..
T Consensus 161 ~dl~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~ 240 (391)
T TIGR01328 161 IDMERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSV 240 (391)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999887777888899999999999999999988999999999988887532 245778
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~ 470 (541)
+++..+++++++++++..|++++.++++.++++|+++|.|.+|+||++++||+|+++++|++|+|+|++|+++++.+.+.
T Consensus 241 l~~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~ 320 (391)
T TIGR01328 241 ISPFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAK 320 (391)
T ss_pred CCcHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999987677889
Q ss_pred HHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+|+++|+++.+++|||+++|++++|.+++|..+++++++..|+.+++||||||+||.+|||+||++||+++
T Consensus 321 ~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 391 (391)
T TIGR01328 321 KLLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGLEDADDLIADLKQALDAL 391 (391)
T ss_pred HHHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875
No 13
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.6e-67 Score=556.94 Aligned_cols=379 Identities=33% Similarity=0.554 Sum_probs=351.2
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
.++|+++|.|...+ ..+++++||||+|++|.|++.++ ..+|.|+||++|+.+.|+++||+++|.++++++
T Consensus 4 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~--------~~~~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~~ 73 (386)
T PRK08045 4 KQATIAVRSGLNDD--EQYGCVVPPIHLSSTYNFTGFNE--------PRAHDYSRRGNPTRDVVQRALAELEGGAGAVLT 73 (386)
T ss_pred CcccceeEcCCCCC--CCCCCccCCccCCcceecCCccc--------cCCceeeCCCCccHHHHHHHHHHHhCCCeEEEE
Confidence 47899999996542 23689999999999999988542 246899999999999999999999999889999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+||++|+.+++.+++++||+|++++++|++++..+...+...++++.+++..|++++++++++ ++++|++|+|+||||.
T Consensus 74 ~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~l~~-~tklV~l~sP~NPtG~ 152 (386)
T PRK08045 74 NTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAE-KPKLVLVESPSNPLLR 152 (386)
T ss_pred CCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHhccc-CCeEEEEECCCCCCCE
Confidence 999999999999999999999999999998887777666667788888888899999999987 5999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~ 390 (541)
++|+++|.++|+++|+++|+|++|+.+....++.+|+|++++|+||+++|++++++|+++. +++++++++......|..
T Consensus 153 v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~ 232 (386)
T PRK08045 153 VVDIAKICHLAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVT 232 (386)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999887788889999999999999999999999998877 577888888778888999
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~ 470 (541)
++++.+|+++++++++..|++++.+|+..++++|++||.|.+|+||+|++||+|+++++|++|+|+|++|+++++.+.+.
T Consensus 233 ~~p~~~~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~ 312 (386)
T PRK08045 233 GGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLR 312 (386)
T ss_pred CCHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987777789
Q ss_pred HHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+|+++|+++.+++|||+++|++++|++++|..++++.+.+.|+++++||||||+||++|||+||++||+++
T Consensus 313 ~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 383 (386)
T PRK08045 313 RFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_pred HHHHhccceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999863
No 14
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.8e-67 Score=563.06 Aligned_cols=386 Identities=32% Similarity=0.480 Sum_probs=352.3
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.....+|.|+|+.+|+.+.+|++||+++|++.+++++
T Consensus 14 ~~t~~~~~~~~~~--~~~~~~~~Pi~~sstf~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~le~~la~l~g~~~~v~fs 91 (437)
T PRK05613 14 FETRSIHAGQSVD--SDTSARNLPIYQTTSYVFDSAEHAKQRFALEDLGPIYSRLTNPTVEALENRIASLEGGVHAVAFA 91 (437)
T ss_pred cchHheeCCCCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCceeeCccChHHHHHHHHHHHHhCCCeEEEeC
Confidence 6799999996542 23689999999999999999988776654445679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC-CCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd-~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
||++|+.+++.+++++||+||+++.+|+++...+...++++|+++.++| ..|+++++++++++ |++|++++++||+|.
T Consensus 92 SG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~~-tk~V~~e~~~Np~~~ 170 (437)
T PRK05613 92 SGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQPN-TKAFFGETFANPQAD 170 (437)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCcc-CeEEEEECCCCCCCc
Confidence 9999999999999999999999999999997777677788999999997 56899999999884 999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHH---------------
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL--------------- 376 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l--------------- 376 (541)
++|+++|+++|+++|+++|+|++++.+..++++++|+|++++|+||+++|+|+.+||+++.+.++
T Consensus 171 v~di~~I~~la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~ 250 (437)
T PRK05613 171 VLDIPAVAEVAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYF 250 (437)
T ss_pred ccCHHHHHHHHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCC
Confidence 99999999999999999999999988887889999999999999999999999999998864220
Q ss_pred --------------------H-HHHHHHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeC
Q 009167 377 --------------------V-TQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHY 435 (541)
Q Consensus 377 --------------------i-~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~ 435 (541)
. +........+|..++|+++|+++++++|+..|++++++|+.+++++|++||+|.+|+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~y 330 (437)
T PRK05613 251 VTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNF 330 (437)
T ss_pred CCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEEC
Confidence 0 1122355678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchhhhHhhhc-cCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCC
Q 009167 436 PGLKSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM 514 (541)
Q Consensus 436 P~l~s~p~~~l~~~~~-~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~ 514 (541)
|++++||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|++++|..++.+.++..|++
T Consensus 331 Pgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~ 410 (437)
T PRK05613 331 AGLKDSPWYATKEKLGLKYTGSVLSFDIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGIT 410 (437)
T ss_pred CCCCCCccHHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCC
Confidence 9999999999999997 789999999998777889999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 515 DNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 515 ~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+++||||||+||++|||+||++||++|
T Consensus 411 ~~liRlsvGlE~~~dLi~Dl~~Al~~~ 437 (437)
T PRK05613 411 QATVRLSVGIEDIDDIIADLEGGFAAI 437 (437)
T ss_pred CCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999875
No 15
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.5e-67 Score=561.71 Aligned_cols=386 Identities=35% Similarity=0.558 Sum_probs=353.2
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|.|...+ ..+++++||||+|++|.|++.+++.+.++....+|.|+|+.+|+.+.||++||+++|++.+++++
T Consensus 14 ~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Ysr~~~p~~~~Le~~lA~l~g~~~av~~s 91 (436)
T PRK07812 14 FETKQIHAGQTPD--PATNARALPIYQTTSYTFDDTDHAAALFGLAEPGNIYTRIMNPTQDVVEQRIAALEGGVAALLLA 91 (436)
T ss_pred cchhheeCCCCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhcCCcCCccccCCCCchHHHHHHHHHHHhCCCeEEEEc
Confidence 6799999995432 23689999999999999999988777666555678999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC-CCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd-~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
|||+|+.+++.+++++||+|+++...|++++.++...+++.|+++.+++ ..|++++++++++ ++++|++|+|+||+|.
T Consensus 92 SG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~l~~ai~~-~tklV~ie~~sNp~G~ 170 (436)
T PRK07812 92 SGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDAWRAAVRP-NTKAFFAETISNPQID 170 (436)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHHHHHhCCC-CCeEEEEECCCCCCCe
Confidence 9999999999999999999999999999998877777788899999995 6689999999987 4999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChH----------------
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 375 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~---------------- 375 (541)
+.|+++|.++||++|+++|||++++.++.++++.+|+|++++|+||+++|+|++++|+++.+..
T Consensus 171 v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~ 250 (436)
T PRK07812 171 VLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDP 250 (436)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCc
Confidence 9999999999999999999999999988889999999999999999999999999999886321
Q ss_pred --------------HHHHHH-HHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCC
Q 009167 376 --------------LVTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKS 440 (541)
Q Consensus 376 --------------li~~l~-~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s 440 (541)
++.+++ ...+..|..++|+++|+++++++|+..|++++++|+.+++++|++||.|.+|+||++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s 330 (436)
T PRK07812 251 SYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPS 330 (436)
T ss_pred ccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 111222 34557899999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhHhhhc-cCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEE
Q 009167 441 HPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR 519 (541)
Q Consensus 441 ~p~~~l~~~~~-~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IR 519 (541)
||+|+++++|+ +|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|+.++|..+++++++..|+++++||
T Consensus 331 ~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liR 410 (436)
T PRK07812 331 SPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVR 410 (436)
T ss_pred CccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEE
Confidence 99999999999 78999999999877778999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHhhC
Q 009167 520 FSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 520 lSvG~e~~edli~dL~~AL~~i 541 (541)
||||+||.+|||+||++||+++
T Consensus 411 lSvGlEd~~dli~dl~~Al~~~ 432 (436)
T PRK07812 411 LAVGIEGIDDILADLEAGFAAA 432 (436)
T ss_pred EEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999853
No 16
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=8.2e-67 Score=558.09 Aligned_cols=386 Identities=33% Similarity=0.568 Sum_probs=352.6
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|+.+|++++||+++|+++|++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~y~R~~~p~~~~le~~lA~l~g~~~av~~ 85 (433)
T PRK08134 8 GFDTLALHAGAAPD--PATGARAVPIHLTTSFVFRDSDHAAALFNLERAGHVYSRISNPTVAVLEERVAALEGGVGAIAT 85 (433)
T ss_pred CcchhheeCCCCCC--CCCCCccCCccCCCccccCCHHHHHHhhcccccCceeecCcChHHHHHHHHHHHHhCCCcEEEe
Confidence 36799999996442 2468999999999999999998888766555568999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+|||+|+++++.+++++||+||++..+|+++..++...++++|++++++|.+|++++++++++ +||+|++++|+||+|.
T Consensus 86 sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~~~i~~-~TklV~~e~~~np~g~ 164 (433)
T PRK08134 86 ASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWRAAIRP-NTRLLFGETLGNPGLE 164 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCcccCc
Confidence 999999999999999999999999999999988876667789999999999899999999988 5999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChH----------------
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 375 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~---------------- 375 (541)
++|+++|+++|+++|+++|+|++++.++.+.++.+|+|++++|+||+++|+|+++||+++....
T Consensus 165 v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~ 244 (433)
T PRK08134 165 VLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPY 244 (433)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCc
Confidence 9999999999999999999999999988888899999999999999999999999998874211
Q ss_pred ----------------HHHHH-HHHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009167 376 ----------------LVTQI-RNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (541)
Q Consensus 376 ----------------li~~l-~~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l 438 (541)
+..+. ......+|..+++.++|+++++|+++..|++++.+|+.+++++|++||.|.+|+||++
T Consensus 245 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l 324 (433)
T PRK08134 245 AGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPEL 324 (433)
T ss_pred ccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 00111 1233567889999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhhc-cCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009167 439 KSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 517 (541)
Q Consensus 439 ~s~p~~~l~~~~~-~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~ 517 (541)
++||+|+++++++ .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|+.++|..++.++++..|+.+++
T Consensus 325 ~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~l 404 (433)
T PRK08134 325 ESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGT 404 (433)
T ss_pred CCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCe
Confidence 9999999999999 789999999998767788999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHhh
Q 009167 518 VRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 518 IRlSvG~e~~edli~dL~~AL~~ 540 (541)
||||||+||++|||+||+|||++
T Consensus 405 iRlsvGlE~~~dli~dl~~Al~~ 427 (433)
T PRK08134 405 IRLSIGLEDADDLIDDLKRALKA 427 (433)
T ss_pred EEEEeccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999986
No 17
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=9.4e-67 Score=557.11 Aligned_cols=385 Identities=35% Similarity=0.560 Sum_probs=351.5
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|+++|+.++||++||+++|.+.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~g~~~~l~~s 80 (425)
T PRK06084 3 LETLAIHAGYSPD--PTTKAVAVPIYQTTSYAFDDTQHGADLFDLKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAVA 80 (425)
T ss_pred cchhheeCCcCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCccccCCCCchHHHHHHHHHHHhCCCceeEeh
Confidence 5688999985432 23689999999999999999988877665455579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+.+++.+++++||+|+++.+.|++++..+...++..|+++.+++..|++++++++++ ++++|++|+|+||+|.+
T Consensus 81 sG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~-~tklV~lesp~NPtG~v 159 (425)
T PRK06084 81 SGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDE-RTKAVFCESIGNPAGNI 159 (425)
T ss_pred hHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhcc-CCcEEEEeCCCCCCCee
Confidence 99999999999999999999999999999888777667778999999999999999999987 49999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChH--HH-------------
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--LV------------- 377 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~--li------------- 377 (541)
+|+++|.++|+++|++||+|++++.+...+++.+|+|++++|+||+++||++++||+++.+.. +.
T Consensus 160 ~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~ 239 (425)
T PRK06084 160 IDIQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPD 239 (425)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCC
Confidence 999999999999999999999999988888889999999999999999999999999986432 10
Q ss_pred ------------------HH-HHHHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009167 378 ------------------TQ-IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (541)
Q Consensus 378 ------------------~~-l~~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l 438 (541)
.. .......+|..++|+++|+++++++++..|++++++|+.+++++|++||.|.+|+||++
T Consensus 240 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l 319 (425)
T PRK06084 240 PSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGL 319 (425)
T ss_pred cccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 00 11224467899999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhhccC-cccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009167 439 KSHPEHHIATQQMTG-FGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 517 (541)
Q Consensus 439 ~s~p~~~l~~~~~~g-~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~ 517 (541)
++||+|.++++|+.| +|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|..++|..++++++++.|+++++
T Consensus 320 ~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~l 399 (425)
T PRK06084 320 PDHPEHELARRYMGGKPASILSFGIKGGQAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDM 399 (425)
T ss_pred CCcccHHHHHHhCCCCcceEEEEEecCCHHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCe
Confidence 999999999999987 8999999998776778999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHhh
Q 009167 518 VRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 518 IRlSvG~e~~edli~dL~~AL~~ 540 (541)
||||||+||.+|||+||++||++
T Consensus 400 iR~svGlEd~~dLi~dl~~Al~~ 422 (425)
T PRK06084 400 VRLSIGIEHIDDIIADLAQALDA 422 (425)
T ss_pred EEEEeccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999985
No 18
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=1.3e-66 Score=553.08 Aligned_cols=383 Identities=36% Similarity=0.575 Sum_probs=356.3
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|+|... . .+++++||||+++||.|++.+++.+.+.+....|.|+||++|+.++||++||+++|.++++++
T Consensus 15 ~~~t~~~~~~~~~--~-~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~al~~ 91 (403)
T PRK07810 15 SQATIGVRGGLLR--S-GFEETAEALYLTSGYVYESAAAAEAAFTGELDRFVYSRYGNPTVSMFEERLRLIEGAEACFAT 91 (403)
T ss_pred CcchhheeCCCCC--C-CCCCccCCccCCCccccCCHHHHHHHhccCcCCcceeCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 3679999999543 2 368899999999999999998877666555567899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+||++|+..++.+++++||+|++++..|++++..+...++..|+++.+++..|++++++++++ +|++|++|+|+||+|.
T Consensus 92 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~-~tklV~~esp~Nptg~ 170 (403)
T PRK07810 92 ASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWEEALSV-PTQAVFFETPSNPMQS 170 (403)
T ss_pred CChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCe
Confidence 999999999999999999999999999999988887778889999999999999999999987 4999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHH-HHHHHhhhcCCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGA 390 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~l~~~~~~~G~~ 390 (541)
+.|+++|+++|+++|++||+|++|+.++..+++.+|+|++++|++|+++|+|++++|+++++++.+. +++......|..
T Consensus 171 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~ 250 (403)
T PRK07810 171 LVDIAAVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPA 250 (403)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999988888888999999999999999999999999999887654 566666778889
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC----CH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DL 466 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~----~~ 466 (541)
++++.+|+++++++++..|++++.+++.+++++|+++|.|.+|+||++++||+|+++++|++|+|+|++|++++ +.
T Consensus 251 ~s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~ 330 (403)
T PRK07810 251 LSAFNAWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAK 330 (403)
T ss_pred CCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986 46
Q ss_pred HHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 467 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 467 ~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
+.+.+|+++|+++.+++|||+.+|++++|+.++|..++.+.+.+.|+.+++||||+|+|+.+|||+||++||
T Consensus 331 ~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGlE~~~dli~dl~~Al 402 (403)
T PRK07810 331 KRAFEVLDKLRVIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGLEDTDDLIADLDRAL 402 (403)
T ss_pred HHHHHHHHhCCceEEeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHhh
Confidence 778999999999999999999999999999999999999999999999999999999999999999999998
No 19
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=5.8e-66 Score=544.71 Aligned_cols=378 Identities=34% Similarity=0.593 Sum_probs=348.9
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
.++|+++|.|...+ ..+++++|||+++++|.|++.. +..+|.|+||++|+.++|+++||+++|.+.++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~Y~R~~~p~~~~le~~lA~l~g~~~v~~~ 72 (382)
T TIGR02080 3 KQATIAVRSGLNSD--TQYGCVVPPIYLSTTYNFTGFN--------EPRAYDYSRSGNPTRDLLQQALAELEGGAGAVVT 72 (382)
T ss_pred CcccceeecCCCCC--CCCCCccCCeeCCceeEeCCcC--------ccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 36799999986542 2368999999999999987532 1236889999999999999999999999899999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++.++|++++..+...+...++++.+++..|++++++++++ ++|+|++|+|+||||.
T Consensus 73 ~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~-~tklV~l~~p~NPtG~ 151 (382)
T TIGR02080 73 NTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQ-KPKLVLIETPSNPLLR 151 (382)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCE
Confidence 999999999999999999999999999999888776666677889999888899999999987 4999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~ 390 (541)
+.|+++|.++|+++|+++|+|++|+.+....++..|+|++++|+||+++|++++++|+++. +++++++++..+...|..
T Consensus 152 ~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~ 231 (382)
T TIGR02080 152 VVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVT 231 (382)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999887777888899999999999999999999999876 567888888888888999
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~ 470 (541)
++++.+|+++++++++..|++++.+|+..+++||++||.|++|+||+|++||+|+++++|+.|+|+|++|+++++.+.+.
T Consensus 232 ~sp~~a~l~lr~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~ 311 (382)
T TIGR02080 232 GGAFDSYLTLRGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVR 311 (382)
T ss_pred CCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987667788
Q ss_pred HHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+|+++|+++.+++|||+++|++++|++++|..++++++...|+++++||||||+||.+|||+||++||++
T Consensus 312 ~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 312 RFLGGLSLFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGLEDADDLIADLEQGLRA 381 (382)
T ss_pred HHHHcCCcceEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999975
No 20
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=6.2e-66 Score=546.29 Aligned_cols=384 Identities=36% Similarity=0.620 Sum_probs=358.0
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|.|... ..++++.+|||++++|.|++.++....+.+...+|.|+|+.+|+.++||++||+++|++++++++
T Consensus 7 ~~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~v~~s 83 (390)
T PRK08133 7 FDTLAVRAGQLR---SPFGEHSEALFLTSSFVFESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALEGAEACVATA 83 (390)
T ss_pred cchhheeCCCCC---CCCCCccCCccCCCCcccCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 679999999543 23688999999999999999887766555445568899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+.+++.+++++||+||++++.|++++..+...+..+|+++++++..|++++++++++ +||+|++|+|+||+|.+
T Consensus 84 sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~-~tklV~ie~p~NptG~v 162 (390)
T PRK08133 84 SGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRP-NTKLFFLETPSNPLTEL 162 (390)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCCc
Confidence 99999999999999999999999999999988887777888999999999999999999987 59999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCch
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN 392 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s 392 (541)
.|+++|.++|+++|+++|+|++++.+....++..|+|++++|+||+++|+++++||++++++++++++.......|..++
T Consensus 163 ~dl~~I~~la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~ 242 (390)
T PRK08133 163 ADIAALAEIAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLS 242 (390)
T ss_pred CCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999888777888889999999999999999999999999998888888877778888999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHH
Q 009167 393 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 472 (541)
Q Consensus 393 ~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~ 472 (541)
+..+++++++++++..|++++.+|+..++++|+++|.|.+|+||+++++|+|+++++|+.|+|+|++|+++++.+.+.+|
T Consensus 243 ~~~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f 322 (390)
T PRK08133 243 PFNAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRV 322 (390)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998777788999
Q ss_pred HHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 473 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 473 l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+++|+++.+++|||+++|++++|++++|..++++.++..|+++++||||||+||.||||+||++||+.
T Consensus 323 ~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 390 (390)
T PRK08133 323 IDATRLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGLEDVADIKADLARGLAA 390 (390)
T ss_pred HHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999973
No 21
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=7.3e-66 Score=550.89 Aligned_cols=386 Identities=33% Similarity=0.550 Sum_probs=351.3
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhc----------ccCCCccCCCCchhHHHHHHHHHHH
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEK----------RRASFEYGRYGNPTTVVVEEKMSAL 222 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~----------~~~~~~Y~R~~~p~~~~Le~~LA~l 222 (541)
++|.++|.|...+ ..+++++||||+|+||.|++.+++.+.+.. ...+|.|+||++|+...|+++||++
T Consensus 18 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~Pt~~~Le~~lA~l 95 (427)
T PRK07049 18 PETQMLNYGYDPE--LSEGAVKPPVFLTSTFVFRSAEDGRDFFDYVSGRKEPPAGEGAGLVYSRFNHPNSEIVEDRLAVY 95 (427)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCccceecCChHHHHhhhhccccccccccccccCccccCCCCcCHHHHHHHHHHH
Confidence 5789999985432 236899999999999999999887765421 1345899999999999999999999
Q ss_pred hCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE-EEEeCCCCHHHHHHhcc----CCCc
Q 009167 223 EGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT-ATVIDPADMEGLEAALN----NNNV 297 (541)
Q Consensus 223 ~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~-v~~vd~~d~e~Le~al~----~~~t 297 (541)
+|.+++++++||++|+.+++.+++++||+|+++.+.|+++..++...++.+|++ +.+.+..|++++++++. +.++
T Consensus 96 eg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~t 175 (427)
T PRK07049 96 EGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRV 175 (427)
T ss_pred hCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCc
Confidence 999999999999999999999999999999999999999887776667788998 45555667888877664 2259
Q ss_pred eEEEEeCCCCCCCccccHHHHHHHHHh------CCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEE
Q 009167 298 SLFFTESPTNPFLRCVDVKLVSDLCHK------KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS 371 (541)
Q Consensus 298 klV~lesP~NPtG~i~dl~~Ia~la~~------~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv 371 (541)
++||+|+|+||||.++|+++|.+++++ +++++|+||+|..++...++.+|+|++++|+||+++|++++++|+++
T Consensus 176 klv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~G~vv 255 (427)
T PRK07049 176 SLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVL 255 (427)
T ss_pred eEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEEEEEE
Confidence 999999999999999999999999987 79999999999888777888889999999999999999999999999
Q ss_pred eChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC--CCCchhhhHhh
Q 009167 372 GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL--KSHPEHHIATQ 449 (541)
Q Consensus 372 ~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l--~s~p~~~l~~~ 449 (541)
+++++++.++..+..+|..+++..+|+++++++++..|++++.++++.++++|+++|.|.+|+||++ ++||+|+++++
T Consensus 256 ~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~ 335 (427)
T PRK07049 256 GRKALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKR 335 (427)
T ss_pred CCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHh
Confidence 9999999999888888999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred hccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009167 450 QMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 529 (541)
Q Consensus 450 ~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~ed 529 (541)
|+.|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|.+++|..++.+++...|+.+++||||||+|+++|
T Consensus 336 ~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~d 415 (427)
T PRK07049 336 QCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGIEHPDD 415 (427)
T ss_pred hCCCCccEEEEEEcCCHHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHH
Confidence 99999999999998777788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 009167 530 LKADVLQALHA 540 (541)
Q Consensus 530 li~dL~~AL~~ 540 (541)
||+||++||++
T Consensus 416 l~~dl~~al~~ 426 (427)
T PRK07049 416 LIADLAQALDA 426 (427)
T ss_pred HHHHHHHHHhc
Confidence 99999999975
No 22
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=6.5e-66 Score=544.83 Aligned_cols=380 Identities=36% Similarity=0.581 Sum_probs=346.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
.+|.++|.|... ..+++++||||+|+||.|++.+. +.+...+|.|+|+++|+.++||+++|+++|.+++++++
T Consensus 3 ~~t~~~~~~~~~---~~~~~~~~pi~~~st~~~~~~~~----~~~~~~~~~y~r~~np~~~~lE~~lA~l~g~~~~l~~~ 75 (385)
T PRK08574 3 RGTDAVRGYRGS---DPYGSLQPPIYLTALFRQEGEAY----PSDRGFDLKYSREENPTLRPLEEALAKLEGGVDALAFN 75 (385)
T ss_pred ccceeeecCCCC---CCCCCccCCccCCcceecCcchh----hcCCcCCceEECCCCccHHHHHHHHHHHhCCCcEEEeC
Confidence 568889987443 23689999999999999887532 22233469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+.+++.+++++||+|+++.+.|+++...++. +...|+++.+++. |++++++++++.++++|++|+|+||+|.+
T Consensus 76 sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~-~~~~g~~v~~~~~-d~~~l~~~i~~~~tklV~ie~p~NPtG~v 153 (385)
T PRK08574 76 SGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKS-LEKFGVKVVLAYP-STEDIIEAIKEGRTKLVFIETMTNPTLKV 153 (385)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHH-hhccCcEEEEECC-CHHHHHHhcCccCceEEEEECCCCCCCEe
Confidence 999999999999999999999999999998877754 3678999988765 68999999986349999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEE-eChHHHHHHHHHhhhcCCCc
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv-~~~~li~~l~~~~~~~G~~~ 391 (541)
+|+++|+++|+++|++||+|++|+.++..+++.+|+|++++|+||+++||+|+++|+++ .++++.++++..+..+|..+
T Consensus 154 ~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~ 233 (385)
T PRK08574 154 IDVPEVAKAAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIM 233 (385)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999988878888899999999999999999999899554 56788888887777789999
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcc--CcccEEEEEEcCCHHHH
Q 009167 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT--GFGGVVSFEVDGDLTAT 469 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~--g~g~~vsf~l~~~~~~~ 469 (541)
++..+++++++++++..|++++.+|+.+++++|+++|.|.+|+||++++||+|+++++||+ |+|+|++|+++++.+.+
T Consensus 234 ~p~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~ 313 (385)
T PRK08574 234 QPFEAYLVLRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAV 313 (385)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999996 79999999998777889
Q ss_pred HHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
.+|+++|+++.+++|||+.+|++++|+.++|..+++++++..|+++++||||||+||.+|||+||++||++|
T Consensus 314 ~~~~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~ 385 (385)
T PRK08574 314 LKFLRSLKLIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGLEDVEDLIEDLDQALGSI 385 (385)
T ss_pred HHHHHcCCcceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999875
No 23
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=1.1e-65 Score=545.58 Aligned_cols=385 Identities=36% Similarity=0.591 Sum_probs=355.5
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|.|... ..++++.+|||++++|.|++.+++.+.+.+...+|.|+||++|+.++||++||+++|.+.+++++
T Consensus 11 ~~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~~~~~ 87 (398)
T PRK07504 11 PATRLVHSGTLR---SQFGETSEALFLTQGFVYDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDARATA 87 (398)
T ss_pred cccceeeCCCCC---CCCCCCcCCeECCCCccCCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCeeeEec
Confidence 679999999632 23678999999999999999887766555555679999999999999999999999999889999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+..++.+++++||+|+++.+.|+++...+...++..|+++++++..|++++++++++ +||+|++|+|+||+|.+
T Consensus 88 sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~ai~~-~tklV~lesp~NptG~v 166 (398)
T PRK07504 88 SGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWEKAVRP-NTKVFFLESPTNPTLEV 166 (398)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCcEe
Confidence 99999998888899999999999999999887776667788999999998899999999987 49999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHH-HHHHHhhhcCCCc
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~l~~~~~~~G~~~ 391 (541)
.|+++|.++|+++|+++|+|++|+.+....+..+|+|++++|+||+++|+|+.+||+++++++++. .++......|..+
T Consensus 167 ~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~ 246 (398)
T PRK07504 167 IDIAAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSL 246 (398)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999887778888899999999999999999999999999887665 4666667788899
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHH
Q 009167 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~ 471 (541)
++..+++++++++++..|++++.+|++.++++|+++|.|.+|+||++++||+|+++++||+|+|+|++|+++++.+.+.+
T Consensus 247 s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~ 326 (398)
T PRK07504 247 SPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFR 326 (398)
T ss_pred CHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877788899
Q ss_pred HHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
|+++|+++.+++|||+++|++++|++++|..++++.++..|+++++||||+|+||++|||+||++||+++
T Consensus 327 ~~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 396 (398)
T PRK07504 327 FLNALKIVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGLEDTDDLIEDLAAALKKV 396 (398)
T ss_pred HHHhCCcceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999863
No 24
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.4e-65 Score=545.53 Aligned_cols=385 Identities=37% Similarity=0.596 Sum_probs=358.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|.++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+||++|+.++||++||+++|++.+++++
T Consensus 10 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~~ 87 (403)
T PRK07503 10 FSTRAIHHGYDPL--DHGGALVPPVYLTATFAFPTAEYGAECFAGEEEGHFYSRISNPTLALLEQRMASLEGGEAAVALA 87 (403)
T ss_pred ccchheeCCCCCC--CCCCCccCCcccCcceecCChHHHHHhhccccCCceeeCCCCchHHHHHHHHHHHhCCCcEEEEc
Confidence 6799999996542 24689999999999999999998888776666679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+.+++.+++++||+||++.+.|+.++.++...+...|++++++|..|++++++++++ +|++|++|+|+||+|.+
T Consensus 88 sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~-~tklV~le~p~NPtG~~ 166 (403)
T PRK07503 88 SGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALKAAISD-KTRMVYFETPANPNMRL 166 (403)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHHHhcCc-cCcEEEEeCCCCCCCee
Confidence 99999999999999999999999999998887776677888999999999999999999987 59999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH--HhhhcCCC
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHHVLGGA 390 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~--~~~~~G~~ 390 (541)
.|+++|.++|+++|++||+|++|+.++...++.+++|++++|+||+++|++++++|+++++++++++++. .....|..
T Consensus 167 ~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~ 246 (403)
T PRK07503 167 VDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAV 246 (403)
T ss_pred eCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCC
Confidence 9999999999999999999999998877778888999999999999999999999999998998888874 35566888
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~ 470 (541)
+++..+++++++++++..|++++.+++..++++|++||.|++|+||++++||+|+++++|+.|+|+|++|+++++.+.+.
T Consensus 247 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~ 326 (403)
T PRK07503 247 MSPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGR 326 (403)
T ss_pred CCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987777889
Q ss_pred HHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+|++.|+++..++|||+++|++++|.+++|..+++++++..|+++++||||||+||++|||+||++||++
T Consensus 327 ~~~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~Al~~ 396 (403)
T PRK07503 327 RFMNALQLFARAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGLEDVADILADLAQALDA 396 (403)
T ss_pred HHHHhCCcceeecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999975
No 25
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-65 Score=544.28 Aligned_cols=370 Identities=35% Similarity=0.607 Sum_probs=339.6
Q ss_pred CCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc
Q 009167 168 IVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP 247 (541)
Q Consensus 168 ~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~ 247 (541)
+.+++++||||+|+||.|++.+++.+.+.+...+|.|+|++||++++||++||+++|++.+++++||++|+..++.++++
T Consensus 5 ~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~ 84 (397)
T PRK05939 5 IEHGAVHKPIHTSVTYGYEDARDLIDVFQGKKPGFTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLR 84 (397)
T ss_pred CCCCCccCCccCCCCeecCCHHHHHHhhcCCcCCCCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcC
Confidence 34689999999999999999988887776655679999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCC
Q 009167 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 327 (541)
Q Consensus 248 pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi 327 (541)
+||+||++++.|+++..++. .++..|+++++++..|+++|++++++ +|++|++|+|+||+|.+.|+++|+++|+++|+
T Consensus 85 ~Gd~Vv~~~~~y~~t~~~~~-~l~~~G~~v~~v~~~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi 162 (397)
T PRK05939 85 AGDHLVSSQFLFGNTNSLFG-TLRGLGVEVTMVDATDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGL 162 (397)
T ss_pred CCCEEEECCCccccHHHHHH-HHHhcCCEEEEECCCCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCC
Confidence 99999999999998877664 46778999999999999999999987 59999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChH--------H-------------HHHHH-HHhh
Q 009167 328 IVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------L-------------VTQIR-NLHH 385 (541)
Q Consensus 328 ~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~--------l-------------i~~l~-~~~~ 385 (541)
++|+|++|+.+..+++..+|+|++++|+||+++|||++++|+++.+.. + +.+++ ....
T Consensus 163 ~livD~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (397)
T PRK05939 163 LYVVDNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLR 242 (397)
T ss_pred EEEEECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHH
Confidence 999999999888788888999999999999999999999998874321 1 11222 2334
Q ss_pred hcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC
Q 009167 386 VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD 465 (541)
Q Consensus 386 ~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~ 465 (541)
.+|..++|+++|+++++++|+..|++++.+|+..+++||++||.|.+|+||+|++||+|+++++++.|+|+|++|+++++
T Consensus 243 ~~G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~ 322 (397)
T PRK05939 243 DMGATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADG 322 (397)
T ss_pred hcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999854
Q ss_pred HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 466 LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 466 ~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+.+|+++|+++.+++|||+++|++++|+.++|..++++.++..|+++++||||+|+||++|||+||++||++
T Consensus 323 -~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGlEd~~dLi~dl~~Al~~ 396 (397)
T PRK05939 323 -IDCFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGIEDEADLIADFEQALDA 396 (397)
T ss_pred -HHHHHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHhc
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999975
No 26
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=1.4e-65 Score=541.34 Aligned_cols=376 Identities=37% Similarity=0.650 Sum_probs=347.6
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|.++|.|...+ ..+++++||||+|+||.|++.+ +..+|.|+|+++|+...||+++|+++|++.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~la~l~g~~~al~~~ 72 (380)
T PRK06176 3 MQTKLIHGGISED--TTTGAVSVPIYQTSTYRQDAIG--------RPKGYEYSRSGNPTRFALEELIADLEGGVKGFAFA 72 (380)
T ss_pred ccceeeECCCCCC--CCCCCccCCcccCCceecCCCC--------CcCCCcccCCCChhHHHHHHHHHHHhCCCCEEEEC
Confidence 5688999996542 2368999999999999998732 23479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
|||.|+.+++ .++++||+|+++++.|++++..+...+...|++++++|..|++++++++++ ++++|++|+|+||+|.+
T Consensus 73 SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~ 150 (380)
T PRK06176 73 SGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAIKP-NTKALYLETPSNPLLKI 150 (380)
T ss_pred CHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhcCc-CceEEEEECCCCCCcee
Confidence 9999998766 578999999999999999988887778889999999999999999999987 49999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~ 391 (541)
.|+++|.++|+++|+++|+|++|+.++..++..+|+|++++|++|+++|++++++|+++.+ +++.++++..+...|..+
T Consensus 151 ~di~~I~~la~~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~ 230 (380)
T PRK06176 151 TDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVL 230 (380)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998877788889999999999999999999999988874 567788887777788889
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHH
Q 009167 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~ 471 (541)
++..+|+++++++++..|++++++++.+++++|+++|.|.+|+||+|+++|+|+++++|++|+|+|++|++++ .+.+.+
T Consensus 231 ~~~~~~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~ 309 (380)
T PRK06176 231 GPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN-DSEAVA 309 (380)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999985 578899
Q ss_pred HHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
|+++|+++.+++|||+++|++++|+.++|..++++.++..|+++++||||||+||++|||+||++||+++
T Consensus 310 f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 310 FVESLKLFILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKI 379 (380)
T ss_pred HHHcCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999874
No 27
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=3.9e-65 Score=537.00 Aligned_cols=375 Identities=29% Similarity=0.510 Sum_probs=339.3
Q ss_pred ccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeCCH
Q 009167 155 SLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASG 234 (541)
Q Consensus 155 t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSG 234 (541)
|+++|.|...+ ..+++++||||+|+||.|++.++.. ....+|.|+|.+||+...||++||+++|++++++++||
T Consensus 1 t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~----~~~~~~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG 74 (377)
T TIGR01324 1 TRLIHSGRQPR--FSQGSVNPPLQRASTVLFDSHAAQR----RAKGELTYGRRGTLTHFALQDAMCELEGGAGCYLYPSG 74 (377)
T ss_pred CeeEECCCCCC--CCCCCccCCeeCCCceeeCChhhhc----CCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEECcH
Confidence 56789885432 2368999999999999999864432 23457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc
Q 009167 235 MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 314 (541)
Q Consensus 235 s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d 314 (541)
++|+.+++.+++++||+||++++.|+++..++...++.+|+++.+++..+.+++++++++ +||+|++|+|+||+|.+.|
T Consensus 75 ~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~~~i~~-~tklV~lesp~Np~g~~~d 153 (377)
T TIGR01324 75 LAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIATLIQP-NTKVLFLEAPSSITFEIQD 153 (377)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCcHHH
Confidence 999999999999999999999999999887766567778999999987766899999987 4999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHH
Q 009167 315 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 394 (541)
Q Consensus 315 l~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~ 394 (541)
+++|+++|+++|+++|+|++|+.+..++++++|+|++++|++|+++||+|+++|+++++++.+++++.....+|..++|.
T Consensus 154 l~~I~~la~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~ 233 (377)
T TIGR01324 154 IPAIAKAARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDAD 233 (377)
T ss_pred HHHHHHHHHHcCCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHH
Confidence 99999999999999999999999988889999999999999999999999999999999988888887777889999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-CHHHHHHHH
Q 009167 395 AAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFI 473 (541)
Q Consensus 395 ~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-~~~~~~~~l 473 (541)
.+|+++++++++..|++++++|+.+++++|++||.|.+|+||+|++||+|+++++|++|+|+|++|++++ +.+.+.+|+
T Consensus 234 ~a~~~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~ 313 (377)
T TIGR01324 234 DAYTTLRGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFL 313 (377)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986 567889999
Q ss_pred HHccCcCeecccCCcccccccCc-cccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 474 DALKIPYIAPSFGGCESIVDQPA-IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 474 ~~L~~~~iavS~G~~~sl~~~pa-~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
++|+++++++|||+++|++++|. .++|. .+...|+.+++||||||+||.+|||+||++||++|
T Consensus 314 ~~l~~~~~~~slG~~~sl~~~~~~~~~~~-----~~~~~~~~~~liR~svGlE~~~dl~~dl~~al~~~ 377 (377)
T TIGR01324 314 DHLQLFGLGYSWGGYESLALCNQPELGHR-----PNIKRNLEGPLIRVHIGLENVDDLKADLKAGFEAI 377 (377)
T ss_pred HhCCcceEeccCCCccceeecCCCCCCHH-----HHHhccCCCCEEEEEeCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999987322 45553 34467888899999999999999999999999976
No 28
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=4.4e-65 Score=541.39 Aligned_cols=378 Identities=36% Similarity=0.589 Sum_probs=348.9
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
.+|+++|.|...+ ..+++++|||+.+++|.|++.. ...+|.|+|+++|+.++|+++||+++|++++++++
T Consensus 13 ~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~y~R~~~p~~~~Le~~lA~l~g~~~~v~~~ 82 (405)
T PRK08776 13 AATAAVRAGIDRD--TAYGAVTPPIVLSSNFSFDGFG--------NKRQYDYTRSGNPTRDLLGEALAELEGGAGGVITA 82 (405)
T ss_pred ccchheeCCCCCC--CCCCCccCCEeccceEEeCCCC--------cccCCcccCCCChHHHHHHHHHHHHhCCCceEEEc
Confidence 6788999996542 3468999999999999998742 12368999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+.+++.+++++||+|+++.+.|+++..++...++..|+++..++..|+++|++++++ ++++|++|+|+||||.+
T Consensus 83 sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v 161 (405)
T PRK08776 83 TGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADALAQ-SPKLVLIETPSNPLLRI 161 (405)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCcc
Confidence 99999999999999999999999999999888777777778999999998899999999987 59999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCc
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~ 391 (541)
.|+++|+++|+++|+++|+|++|+.+....++.+|+|++++|+||+++|++++++|+++. ++++.++++......|..+
T Consensus 162 ~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~ 241 (405)
T PRK08776 162 TDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTG 241 (405)
T ss_pred CCHHHHHHHHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999877677888899999999999999999988998876 5678788877777778888
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHH
Q 009167 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~ 471 (541)
+++.+++++++++++..|++++.+|+..++++|+++|.|.+|+||++++||+|++++++++|+|+|++|+++++.+.+.+
T Consensus 242 s~~~a~l~~~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~ 321 (405)
T PRK08776 242 SPFDAFLTLRGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRA 321 (405)
T ss_pred CHHHHHHHHhhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778899
Q ss_pred HHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
|+++|+++.+++|||+.+|++++|+.++|..++++.+...|+++++||||||+||++|||+||++||+++
T Consensus 322 f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~ 391 (405)
T PRK08776 322 FVDGLRYFTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLARA 391 (405)
T ss_pred HHHhCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999863
No 29
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=4.4e-65 Score=538.32 Aligned_cols=380 Identities=38% Similarity=0.634 Sum_probs=353.9
Q ss_pred cccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeCC
Q 009167 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 233 (541)
Q Consensus 154 ~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sS 233 (541)
.|.++|.|... ..++++.+|||++++|.|++.++..+.+.+...+|.|+||++|+..+||++||+++|++.+++++|
T Consensus 1 ~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~~~~~s 77 (380)
T TIGR01325 1 ATLAIRGGKER---TEFREHAEALFLTSSFVYDSAAHAADRFAGEIPGFVYSRYANPTVAAFEERIAALEGAERAVATAT 77 (380)
T ss_pred CceeEECCCCC---CCCCCccCCeeCCcceecCCHHHHHHhhccccCCcceecCCCchHHHHHHHHHHHhCCCcEEEECC
Confidence 36788998533 236889999999999999998776665555556799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccc
Q 009167 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 313 (541)
Q Consensus 234 Gs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~ 313 (541)
|++|+.+++.+++++||+|+++.+.|++++..+...++.+|+++.+++..|++++++++++ ++++|++|+|+||+|.+.
T Consensus 78 G~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~-~tklV~le~p~np~g~~~ 156 (380)
T TIGR01325 78 GMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKP-NTKLVFVETPSNPLGELV 156 (380)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCeee
Confidence 9999999999999999999999999999888777778889999999999899999999987 499999999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchH
Q 009167 314 DVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP 393 (541)
Q Consensus 314 dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~ 393 (541)
|+++|.++|+++|+++|+|++|+.+...+++.+|+|++++|+||+++|+++.++|++++++++++.++.....+|..+++
T Consensus 157 dl~~I~~la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p 236 (380)
T TIGR01325 157 DIAALAELAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSP 236 (380)
T ss_pred CHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCH
Confidence 99999999999999999999999887778888899999999999999999999999999999999888877778999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHH
Q 009167 394 NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFI 473 (541)
Q Consensus 394 ~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l 473 (541)
..+++++++++++..|++++.+++.+++++|+++|.|.+|+||+++++|+|+++++|+.|+|+|++|+++ +.+.+.+|+
T Consensus 237 ~~a~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~-~~~~~~~f~ 315 (380)
T TIGR01325 237 FNAWVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA-DRAAAWKVL 315 (380)
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-CHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 667889999
Q ss_pred HHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 474 DALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 474 ~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
++|+++.+++|||+++|++.+|++++|..+++++++..|+.+++||||||+||++|||+||++||
T Consensus 316 ~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al 380 (380)
T TIGR01325 316 DAVELVSITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVGLEDVDDLIADLKRAL 380 (380)
T ss_pred HcCCcceEcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999986
No 30
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=8.9e-65 Score=542.79 Aligned_cols=385 Identities=31% Similarity=0.494 Sum_probs=350.8
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|.|...+ ..+++++||||++++|.|++.+++...+.....++.|+|.++|+...||++||+++|.+.+++++
T Consensus 8 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~al~~~ 85 (427)
T PRK05994 8 FATLAVHAGAQPD--PTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRITNPTNAVLEERVAALEGGTAALAVA 85 (427)
T ss_pred cchhheECCcCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhccccCCcceECCCCccHHHHHHHHHHHhCCCcEEEEc
Confidence 6799999995432 23589999999999999999887777665444568999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+.+++.+++++||+||++.+.|+++...+...+...|++++++|..|++++++++++ +|++|++|+|+||+|.+
T Consensus 86 SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~-~tklV~vesp~NptG~v 164 (427)
T PRK05994 86 SGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAITP-RTKAIFIESIANPGGTV 164 (427)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCee
Confidence 99999999999999999999999999999887776667888999999999999999999987 59999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh------------------
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG------------------ 374 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~------------------ 374 (541)
+|+++|.++|+++|+++|+|++++.++..+++++|+|++++|+||+++||++.+||+++...
T Consensus 165 ~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~ 244 (427)
T PRK05994 165 TDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRP 244 (427)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcc
Confidence 99999999999999999999999998888899999999999999999999999999888422
Q ss_pred H-----HHHH----------HHHHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCC
Q 009167 375 K-----LVTQ----------IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 439 (541)
Q Consensus 375 ~-----li~~----------l~~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~ 439 (541)
+ +.+. .....+..|..++++.+|+++++|+++..|++++++|+..++++|++||.|.+|+||+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~ 324 (427)
T PRK05994 245 EYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLP 324 (427)
T ss_pred hhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCC
Confidence 1 1111 112345678999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhHhhhc-cCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeE
Q 009167 440 SHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 518 (541)
Q Consensus 440 s~p~~~l~~~~~-~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~I 518 (541)
+||+|+++++|+ +|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|+.++|..+++++++..|+++++|
T Consensus 325 ~~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~li 404 (427)
T PRK05994 325 DDPYHALAQKYSPKGAGAVFTFGLKGGYEAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVV 404 (427)
T ss_pred CCccHHHHHHhcCCCceEEEEEEecCCHHHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcE
Confidence 999999999997 7899999999987777899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHhh
Q 009167 519 RFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 519 RlSvG~e~~edli~dL~~AL~~ 540 (541)
|||||+||++|||+||++||++
T Consensus 405 RlsvGlE~~~dli~dl~~Al~~ 426 (427)
T PRK05994 405 RLSIGIEDVDDIIADLEQALAK 426 (427)
T ss_pred EEEeccCCHHHHHHHHHHHHhh
Confidence 9999999999999999999985
No 31
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.3e-64 Score=537.91 Aligned_cols=386 Identities=36% Similarity=0.616 Sum_probs=356.6
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
.+|+++|.|...+ ..++++++||+.+++|.|++.+++.+.+..+..+|.|+||++|+..+||++||+++|.+++++++
T Consensus 9 ~~t~~~~~~~~~~--~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~iA~~~g~~~~l~~~ 86 (400)
T PRK06234 9 FATKAIHGGHIGD--KQFGSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGEAAVVAA 86 (400)
T ss_pred ccchheECCCCCC--CCCCCccCCcccccceecCChHHHHHhhccCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEEc
Confidence 5799999996532 23689999999999999999887766554434578899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+.+++.+++++||+|+++.+.|+.++..+...++..|+++++++..|++++++++++ +|++|++|+|+||||.+
T Consensus 87 sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~~i~~-~tklI~iesP~NPtG~v 165 (400)
T PRK06234 87 SGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVRNALKA-NTKVVYLETPANPTLKV 165 (400)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHHHHhcc-CCeEEEEECCCCCCCCc
Confidence 99999999999999999999999999999888777777888999999999999999999987 49999999999999999
Q ss_pred ccHHHHHHHHHhC--CCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH--hhhcC
Q 009167 313 VDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLG 388 (541)
Q Consensus 313 ~dl~~Ia~la~~~--gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~--~~~~G 388 (541)
.|+++|.++|+++ |+++|+|++|+.++...++..++|++++|+||+++|++++++|+++++++++++++.. ...+|
T Consensus 166 ~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g 245 (400)
T PRK06234 166 TDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTG 245 (400)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcC
Confidence 9999999999997 9999999999988777788889999999999999999998899999999988888753 34578
Q ss_pred CCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHH
Q 009167 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA 468 (541)
Q Consensus 389 ~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~ 468 (541)
..+++..+++++++++++..|++++.+|+++++++|+++|.|.+|+||+|++||+|++++++++|+|+|++|+++++.+.
T Consensus 246 ~~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~ 325 (400)
T PRK06234 246 SVIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEE 325 (400)
T ss_pred CCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999876677
Q ss_pred HHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 469 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 469 ~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+.+|+++|+++++++|||+++|++++|++++|..+++++++..|+++++||||+|+||.+|||+||++||+++
T Consensus 326 ~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 326 GKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALDLI 398 (400)
T ss_pred HHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999863
No 32
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.6e-64 Score=535.19 Aligned_cols=381 Identities=35% Similarity=0.567 Sum_probs=351.3
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+||++|+.++||++||+++|.++++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al~~ 82 (386)
T PRK06767 5 HMETALIHHGYTSE--EHKGSLTPPLFQTSTFTFETAQQGEASFAGVDPSYIYSRLGNPTVKLFEERMAVLEGGEEALAF 82 (386)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCccceecCCHHHHHHhhccCcCCccccCCCCcchHHHHHHHHHHhCCCcEEEE
Confidence 36799999995542 2368999999999999999998888777666667999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++.+.|++++..+....+.+|+++.+++..|++++++++++ ++++|++|+|+||+|.
T Consensus 83 ~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~~~i~~-~tklV~lesp~NptG~ 161 (386)
T PRK06767 83 GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIENKIRP-NTKLIFVETPINPTMK 161 (386)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhhCc-CceEEEEeCCCCCCce
Confidence 999999999999999999999999999999988887667778999999988899999999987 4999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHH-HHhhhcCCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR-NLHHVLGGA 390 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~-~~~~~~G~~ 390 (541)
+.|+++|.++|+++|+++|+|++|+.+....++..|+|++++|+||+++|++++++|++++++++++++. ..+..+|+.
T Consensus 162 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~ 241 (386)
T PRK06767 162 LIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGI 241 (386)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999887777888899999999999999999988999999988877654 455667888
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~ 470 (541)
++++.+|+++++++++..|++++.+++..++++|+++|+|+.|.|| +|+++++|++++|+|++|+++++.+.+.
T Consensus 242 ~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~~~gg~vsf~l~~~~~~~~ 315 (386)
T PRK06767 242 MAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMKRGGGVISFSIKGGKEETQ 315 (386)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCCCCCceEEEEEcCCHHHHH
Confidence 8999999999999999999999999999999999999999999998 6899999999999999999987667889
Q ss_pred HHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+|+++|+++++++|||+++|++++|..++|..++++++...|+++++||||||+||.+|||+||++||++|
T Consensus 316 ~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 386 (386)
T PRK06767 316 AFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQALKKI 386 (386)
T ss_pred HHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999876
No 33
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2e-64 Score=532.32 Aligned_cols=374 Identities=38% Similarity=0.659 Sum_probs=345.1
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|+|...+ ..+++++||||+|+||.|++.+ ...+|.|+|+++|+..+||++||+++|.+.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~lA~l~g~~~~~~~~ 72 (377)
T PRK07671 3 AKTKLIHGGIIGD--PSTGAVSVPIYQVSTYKQEAVG--------KHQGYEYSRTGNPTRAALEELIAVLEGGHAGFAFG 72 (377)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCCC--------CcCCCCcCCCCChHHHHHHHHHHHHhCCCceEEeC
Confidence 5799999996542 2368999999999999988742 23468999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+..++ .++++||+|+++++.|++++..+...+..+|+++++++..|++++++++++ +|++|++|+|+||+|.+
T Consensus 73 sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~-~tklV~le~P~NPtg~~ 150 (377)
T PRK07671 73 SGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRP-NTKAIYVETPTNPLLKI 150 (377)
T ss_pred CHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCCcc
Confidence 9999887765 578999999999999998887776677888999999998899999999987 49999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCc
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~ 391 (541)
.|+++|.++|+++|+++|+|++|+.++..++..+|+|++++|++|+++|++++++|+++. +++++++++..+...|..+
T Consensus 151 ~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~ 230 (377)
T PRK07671 151 TDIKKISTIAKEKGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGIL 230 (377)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999998877777888899999999999999999988998776 5678888888888889999
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHH
Q 009167 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~ 471 (541)
++..+|+++++++++..|++++++|+..++++|+++|.|.+|+||+++++|+|+++++|+.|+|+|++|++ ++.+.+.+
T Consensus 231 ~~~~a~l~~~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~-~~~~~~~~ 309 (377)
T PRK07671 231 GPQDSWLLLRGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV-GSEETANK 309 (377)
T ss_pred CHHHHHHHHcCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe-CCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 56788999
Q ss_pred HHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
|+++|+++.+++|||+++|++++|+.++|..++.+.+..+|+.+++||||||+||++|||+||++||+
T Consensus 310 f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 377 (377)
T PRK07671 310 VLERLQYFTLAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGIEDGEDLIEDLAQALA 377 (377)
T ss_pred HHHhCCcceEccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999985
No 34
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=3e-64 Score=539.97 Aligned_cols=374 Identities=33% Similarity=0.586 Sum_probs=342.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|.|...+ .+++++||||+|+||.|++.. ....|.|+|+++|+.++|++++|+++|.+.+++++
T Consensus 87 ~~t~~~~~~~~~~---~~~~~~~Pi~~sst~~~~~~~--------~~~~~~Y~r~gnpt~~aLE~~lA~leg~e~ai~~~ 155 (464)
T PLN02509 87 VSTLLVNLDNKFD---PFDAMSTPLYQTATFKQPSAI--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFT 155 (464)
T ss_pred cchHheeCCCCCC---CCCCccCCccccceecCcccc--------ccCCCccCCCCCHHHHHHHHHHHHHhCCCEEEEeC
Confidence 7899999995432 357999999999999887631 22468999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+.+++ .++++||+||++++.|+++..++...+...|+++.+++..|++++++++++ +||+|++|+|+||+|.+
T Consensus 156 SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~~ai~~-~TklV~lesPsNPtG~i 233 (464)
T PLN02509 156 SGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVAAAIGP-QTKLVWLESPTNPRQQI 233 (464)
T ss_pred cHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHHHhCCc-CCeEEEEECCCCCCCCH
Confidence 9999986655 578999999999999999887776667788999999998899999999987 49999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~ 391 (541)
.|+++|+++|+++|+++|+|++++.++..++..+|+|++++|++|+++||+++++|+++.+ +.+.++++..+...|..+
T Consensus 234 ~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l 313 (464)
T PLN02509 234 SDIRKIAEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGL 313 (464)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999998887888889999999999999999999999999875 445566666666667788
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHH
Q 009167 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~ 471 (541)
+|..+|+++++++++..|++++.+++++++++|++||.|++|+||+|++||+|+++++|++|+|+|++|++ ++.+.+.+
T Consensus 314 ~p~~A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~-~~~~~~~~ 392 (464)
T PLN02509 314 APFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT-GSVALSKH 392 (464)
T ss_pred CHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe-CCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 56778899
Q ss_pred HHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
|+++|+++.+++|||+++|++++|+.++|..++++++++.|+++++||||||+||.+|||+||++||+.
T Consensus 393 f~~~l~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGlE~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 393 LVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFRT 461 (464)
T ss_pred HHHcCCcceEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999974
No 35
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=5.2e-64 Score=529.17 Aligned_cols=373 Identities=41% Similarity=0.685 Sum_probs=345.3
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|.++|.|.. ..++++.||||+|+||.|++. .+|.|+|..+|+.++||++||+++|.+.+++++
T Consensus 3 ~~t~~~~~~~~----~~~~~~~~pi~~~~~~~~~~~-----------~~~~y~r~~~p~~~~L~~~lA~l~g~~~~v~~~ 67 (376)
T PRK06460 3 DATRTVREDID----EATGAITTPIYQTTAYHYPEG-----------EKYRYSREANPTVLELTKKIVELENAEMGVAFS 67 (376)
T ss_pred cceeeeecCCC----CCCCCccCCccCCcceeeCCC-----------CCcceeCCCCccHHHHHHHHHHHhCCCcEEEeC
Confidence 68899999842 236899999999999999863 268999999999999999999999998899999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
+|++|+..++.+++++||+|+++.+.|++++..+...++..|+++..++.++.+.+++.+++ ++++|++|+|+||||.+
T Consensus 68 sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l~~~~~~-~tklV~l~sp~NPtG~v 146 (376)
T PRK06460 68 SGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNIIEKAKSK-RYDVVFVENITNPLLRV 146 (376)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCcc
Confidence 99999999999999999999999999998888887778888999999987776666666655 59999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCch
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN 392 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s 392 (541)
+|+++|.++|+++|+++|+|++|+.++...++..++|++++|+||+++|++|.++|+++++++++++++..+..+|..++
T Consensus 147 ~d~~~I~~la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~ 226 (376)
T PRK06460 147 VDITELSKVCKENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLD 226 (376)
T ss_pred cCHHHHHHHHHHcCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999887666667778999999999999999988999999999999999888888888889
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHH
Q 009167 393 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 472 (541)
Q Consensus 393 ~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~ 472 (541)
+..+++++++++++..|++++.+|+++++++|+++|.|.+|+||+|++||+|+++++|++|+|+|++|+++++.+.+.+|
T Consensus 227 ~~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~ 306 (376)
T PRK06460 227 PHAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKV 306 (376)
T ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998777789999
Q ss_pred HHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 473 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 473 l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+++|+++.+++||||++|++.+|++++|..++.+.+.+.|+.+++||||||+||++|||+||++||+++
T Consensus 307 ~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 307 MKSLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGIEDVNDLIEDLDRALSTL 375 (376)
T ss_pred HHhCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999864
No 36
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=3.3e-64 Score=537.72 Aligned_cols=384 Identities=38% Similarity=0.624 Sum_probs=347.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|.++|+|...+ ..+++++||||++++|.|++.+++.+.++....+|.|+|+++|+.++||++||+++|.+.+++++
T Consensus 2 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~ysr~~~p~~~~le~~lA~l~g~~~~v~~~ 79 (418)
T TIGR01326 2 FETLQLHAGQEPD--PTTGSRAVPIYQTTSYVFDSTEHAAALFGLQEAGNIYSRLMNPTTDVLEQRIAALEGGVAALAVA 79 (418)
T ss_pred ccceeEECCCCCC--CCCCCccCCccCCCCeecCCHHHHHHhhccCcCCceeECCCChhHHHHHHHHHHHhCCCeEEEEc
Confidence 5688999986542 23689999999999999999987666554344568999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+..++.+++++||+|+++.+.|++++..+...++..|+++++++..|++++++++++ ++++|++|+|+||+|.+
T Consensus 80 sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~-~t~~V~le~p~NPtg~v 158 (418)
T TIGR01326 80 SGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFEKAIDE-NTKAVFAETIGNPAINV 158 (418)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCee
Confidence 99999999999999999999999999999888877777888999999998899999999987 49999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHH---------------
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV--------------- 377 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li--------------- 377 (541)
.|+++|.++|+++|+++|+|++|+.+...+++..|+|++++|+||+++|+|+++||+++.++++.
T Consensus 159 ~dl~~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~ 238 (418)
T TIGR01326 159 PDIEAIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPS 238 (418)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCc
Confidence 99999999999999999999999887777788889999999999999999999888888543211
Q ss_pred -----------------HHHHHHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCC
Q 009167 378 -----------------TQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKS 440 (541)
Q Consensus 378 -----------------~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s 440 (541)
+......+..|..++|..+|+++++++++..|++++.+|+..++++|.++|+|..|+||++++
T Consensus 239 q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~ 318 (418)
T TIGR01326 239 YHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLAS 318 (418)
T ss_pred cccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 111123445688889999999999999999999999999999999999999999999999999
Q ss_pred CchhhhHhhhc-cCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEE
Q 009167 441 HPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR 519 (541)
Q Consensus 441 ~p~~~l~~~~~-~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IR 519 (541)
||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++++|..++|..++++++...|+++++||
T Consensus 319 ~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR 398 (418)
T TIGR01326 319 HPHHALAKKYLPKGFGAVLSFEIKGGREAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIR 398 (418)
T ss_pred CccHHHHHHhccCCCcceEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEE
Confidence 99999999999 78999999999877777899999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHh
Q 009167 520 FSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 520 lSvG~e~~edli~dL~~AL~ 539 (541)
||||+||++|||+||++||+
T Consensus 399 ~svGlE~~~dl~~dl~~Al~ 418 (418)
T TIGR01326 399 LSVGIENIDDIIADLEQALE 418 (418)
T ss_pred EEecCCCHHHHHHHHHHhhC
Confidence 99999999999999999985
No 37
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=8.9e-64 Score=526.62 Aligned_cols=368 Identities=48% Similarity=0.808 Sum_probs=348.0
Q ss_pred CcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCC
Q 009167 171 DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG 250 (541)
Q Consensus 171 ~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd 250 (541)
++++||||+|+||.|++.+++.+.+.+...+|.|+|+++|+.++||++||+++|.+++++++||++|+..++.+++++||
T Consensus 1 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd 80 (369)
T cd00614 1 GAVAPPIYQTSTFVFPSPAEAADLFALREGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGD 80 (369)
T ss_pred CCcCCCccCCCceecCCHHHHHHhhcCCcCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCC
Confidence 46899999999999999998887776666789999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEE
Q 009167 251 HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 251 ~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lI 330 (541)
+|+++.+.|+++...+...++..|+++.+++.+|++++++++++ ++++|++|+|+||+|.+.|+++|+++|+++|+++|
T Consensus 81 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~li 159 (369)
T cd00614 81 HVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLV 159 (369)
T ss_pred EEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEE
Confidence 99999999999988777777788999999999999999999987 59999999999999999999999999999999999
Q ss_pred EeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHHH
Q 009167 331 IDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLR 409 (541)
Q Consensus 331 vDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~r 409 (541)
+|++|+.++..+++.+|+|++++|+||+++|++++++|++++++ +++++++.....+|..+++..+++++++++++..|
T Consensus 160 vD~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~r 239 (369)
T cd00614 160 VDNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPLR 239 (369)
T ss_pred EECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHHH
Confidence 99999988877888899999999999999999999999999987 88899988877789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcc
Q 009167 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 489 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~ 489 (541)
++++.+|+++++++|+++|.|.+|.||+++++|+|+++++++.|+|+|++|+++++.+.+.+|+++|+++.+++|||+++
T Consensus 240 ~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~ 319 (369)
T cd00614 240 MERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVE 319 (369)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999866788999999999999999999999
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
|++++|+.++|..++.+.+...|+++++||||||+||.+|||+||++||+
T Consensus 320 sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGlE~~~dl~~dl~~al~ 369 (369)
T cd00614 320 SLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGIEDVEDLIADLEQALK 369 (369)
T ss_pred eeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999984
No 38
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=8.2e-64 Score=526.55 Aligned_cols=376 Identities=38% Similarity=0.647 Sum_probs=341.3
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|.++|.|...+ ..+++++||||++++|.|++.+++...+.....+|.|+|.++|++++||+++|+++|++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pI~~ss~~~~~~~~~~~~~~~~~~~~~~Y~r~~~P~~~~lE~~la~leg~~~av~~ 85 (384)
T PRK06434 8 GFNTRAVQSGELRD--PRFGNVTTPIFETSTFVYPNSEKEAYMDSTRGMPYIYTRWGNPTVQAFEEKYAVLENAEHALSF 85 (384)
T ss_pred CcccceeECCCCCC--CCCCCccCCeeCCcceecCChHHhhhccccccCCcceeCCCChhHHHHHHHHHHHhCCCcEEEe
Confidence 47899999985442 3468999999999999999987655322222346999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+|||+|+.+++.+++++||+||++...|++++.++...+..+|++++++|.++.+.++ +++.++++|++|+|+||++.
T Consensus 86 sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~~ 163 (384)
T PRK06434 86 SSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTLK 163 (384)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCce
Confidence 9999999999999999999999999999999988877788899999999987666655 44435999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~ 390 (541)
+.|+++|+++|++++ +++|+++++++..+++.+|+|++++|.+|+++||++++||+++. ++++.++++..+..+|..
T Consensus 164 v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~ 241 (384)
T PRK06434 164 VPDIKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSN 241 (384)
T ss_pred eecHHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCC
Confidence 999999999999998 56799999998899999999999999999999999999999877 456777787776678999
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~ 470 (541)
++++.+|+++++++++..|+++++++++.++++|+.||.|++|+||+|+ ++++|++|+|+|++|++++ .+.+.
T Consensus 242 ~~~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~g~g~~~sf~l~~-~~~~~ 314 (384)
T PRK06434 242 PDPIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLRGFGGMLSFELRS-MEDVH 314 (384)
T ss_pred CCHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcCCCCceEEEEECC-HHHHH
Confidence 9999999999999999999999999999999999999999999999984 7899999999999999985 67889
Q ss_pred HHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+|+++|+++.+++|||+++|++++|+.++|..++++++...|+++++||||||+||++|||+||++||++
T Consensus 315 ~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGlEd~~dLi~dl~~Al~~ 384 (384)
T PRK06434 315 KFIRNLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGIEDIDDLIKDIENALSK 384 (384)
T ss_pred HHHHhCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999974
No 39
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=1.8e-63 Score=525.41 Aligned_cols=374 Identities=34% Similarity=0.598 Sum_probs=344.0
Q ss_pred cccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeCC
Q 009167 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 233 (541)
Q Consensus 154 ~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sS 233 (541)
+|+++|.|... . .+++++||||+|++|.|++.+ ...+|.|+|+++|+.++||+++|+++|++++++++|
T Consensus 2 ~t~~~~~~~~~--~-~~~~~~~pi~~~~~~~~~~~~--------~~~~~~Y~r~~~p~~~~le~~la~l~g~~~~l~~~s 70 (378)
T TIGR01329 2 STLLVNTDNKN--D-PYDASSMPIYQTATFKQPLAI--------ENGPYDYTRSGNPTRTALESLLAKLDKADRAFAFSS 70 (378)
T ss_pred CceeEeCCCCC--C-CCCCcCCCeecCcceecCCcc--------ccCCCccCCCCChHHHHHHHHHHHHhCCCcEEEECC
Confidence 68889998542 2 368999999999999987643 124699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccc
Q 009167 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 313 (541)
Q Consensus 234 Gs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~ 313 (541)
|++|+.+++. ++++||+|+++++.|+++..++...++.+|+++++++..|++++++++++ ++|+|++|+|+||+|.+.
T Consensus 71 G~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i~~-~tklv~le~psnptg~v~ 148 (378)
T TIGR01329 71 GMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAALGP-KTKLVLLESPTNPLQKIV 148 (378)
T ss_pred HHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCc-CceEEEEECCCCCCCeee
Confidence 9999988775 78999999999999999887777777888999999999999999999987 599999999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCCch
Q 009167 314 DVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALN 392 (541)
Q Consensus 314 dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~s 392 (541)
|+++|+++|+++|+++|+|++++.+....++.+|+|++++|++|+++|++++++|+++.+ +++.++++..+...|..++
T Consensus 149 dl~~I~~la~~~g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~ 228 (378)
T TIGR01329 149 DIRKISEMAHAQNALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLA 228 (378)
T ss_pred cHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCC
Confidence 999999999999999999999988887888888999999999999999998889999874 5566778877776788899
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHH
Q 009167 393 PNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 472 (541)
Q Consensus 393 ~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~ 472 (541)
+..+++++++++++..|++++.+|+..++++|++||.+.+|.||+|+++|+|+++++++.|+|+|++|++ ++.+.+.+|
T Consensus 229 ~~~a~l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~~~~~~~~ 307 (378)
T TIGR01329 229 PFDCWLLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GSVALSKRL 307 (378)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE-CCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 566668999
Q ss_pred HHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 473 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 473 l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
++.|+++++++|+|+++|++++|+.++|..++++++++.|+++++||||||+||++|||+||++||+++
T Consensus 308 ~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 308 VEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFVTA 376 (378)
T ss_pred HHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999863
No 40
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.1e-63 Score=526.58 Aligned_cols=375 Identities=39% Similarity=0.636 Sum_probs=343.6
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|.|...+ ..+++++||||+|+||.|++.+. ...+|.|+|+++|+..+||++||+++|.+.+++++
T Consensus 13 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~-------~~~~~~Y~r~~~p~~~~Le~~lA~~~g~~~~i~~~ 83 (388)
T PRK07811 13 FATRAIHAGYEPD--PATGAVNPPIYASSTFAQDGVGG-------LRGGYEYARTGNPTRTALEEQLAALEGGAYGRAFS 83 (388)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCccc-------ccCCCcccCCCCccHHHHHHHHHHHhCCCceEEeC
Confidence 6799999986542 34689999999999999887532 12468999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+.+++.+++++||+|+++.+.|++++..+...++.+|+++.+++..|+++|++++++ ++|+|++|+|+||+|.+
T Consensus 84 sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~ 162 (388)
T PRK07811 84 SGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAITP-RTKLIWVETPTNPLLSI 162 (388)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhcCc-CCeEEEEECCCCCccee
Confidence 99999999999999999999999999999887777777888999999999999999999987 59999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~ 391 (541)
.|+++|.++|+++|++||+|++|+.+....+...|+|++++|++|+++|++++++|+++.+ +++.++++..+...|..+
T Consensus 163 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~ 242 (388)
T PRK07811 163 TDIAALAELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVP 242 (388)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998877778888999999999999999999889988874 667777777666678888
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHH
Q 009167 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~ 471 (541)
++..+++++++++++..|++++.+|+..++++|+++|.|.+|+||++++||+|+++++|++|+|+|++|+++++.+.+.+
T Consensus 243 s~~~a~l~~~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~ 322 (388)
T PRK07811 243 GPFDAYLTLRGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARD 322 (388)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778899
Q ss_pred HHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
|+++|+++.+++|||+++|++++|..++|..++.+ ..|+.+++||||||+||++|||+||++||++
T Consensus 323 f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 388 (388)
T PRK07811 323 FCARTKVFTLAESLGGVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLADLEQALGQ 388 (388)
T ss_pred HHHhCCcceeeccCCCCcceEeCCcccCcccCCHh---hcCCCCCEEEEEeCCCCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999998854 4699999999999999999999999999974
No 41
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=9.1e-63 Score=522.37 Aligned_cols=380 Identities=26% Similarity=0.431 Sum_probs=345.5
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+||+||+.++||+++|+++|.+.++++
T Consensus 9 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~~ 86 (394)
T PRK07050 9 ALQTRIVQPDDQIP--PGFRSFVTPVARASTVVFPDLATMRALDWRQDVQWRYGLHATPTSLALAQRLAEIEGGRHALLQ 86 (394)
T ss_pred CccchheECCCCCC--CCCCCccCCeeCCcceecCCHHHHHhhcccccCCcccCCCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 47899999996542 2368999999999999999998877655444567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+||++|+.+++.+++++||+||++++.|+++..++...+..+|+++.+++..+.+++++++++ +||+|++|+|+||+|.
T Consensus 87 ~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~~~i~~-~tklV~le~p~Np~~~ 165 (394)
T PRK07050 87 PSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIADLIQP-NTRLIWLEAPGSVTME 165 (394)
T ss_pred ccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCcc
Confidence 999999999999999999999999999999887776667888999999988788899999987 4999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~ 390 (541)
+.|+++|+++|+++|++||+|++|+.+..++++.+|+|++++|++|+++|++++++|+++. +++++++++..+...|..
T Consensus 166 ~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~ 245 (394)
T PRK07050 166 VPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIG 245 (394)
T ss_pred HhhHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999998889999999999999999999999998997776 678888898888888999
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC--CHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DLTA 468 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~--~~~~ 468 (541)
++++++++++++++++..|++++.+++.+++++|+++|.|.+|+||+++++|+|.++++++.++|++++|++++ +.+.
T Consensus 246 ~~~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~ 325 (394)
T PRK07050 246 VSADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQ 325 (394)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986 3578
Q ss_pred HHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 469 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 469 ~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+|++.|+.+++++|||+++|+++ |..++|.... ...+.+++||||||+||.+|||+||++||++
T Consensus 326 ~~~~~~~l~~~~~~~s~G~~~sl~~-~~~~~~~~~~-----~~~~~~~~iR~svGlE~~~dl~~dl~~al~~ 391 (394)
T PRK07050 326 VDAFVEALELFAIGWSWGGACSLAM-PYDVASMRTA-----KWPHRGTLVRLYIGLEDEADLIADLEQALEA 391 (394)
T ss_pred HHHHHHcCCCCeeccccCCccceEe-eCcccccchh-----hcCCCCCEEEEEeCcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999997 7766665432 2336679999999999999999999999985
No 42
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=6e-62 Score=515.85 Aligned_cols=376 Identities=37% Similarity=0.610 Sum_probs=347.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|.|...+ ..+++++||||++++|.|++.++ ..+|.|+|..+|+.++||++||+++|++.+++++
T Consensus 7 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~ 76 (390)
T PRK08064 7 IDTLLLHNQYKHD--KQTGAVNVPIYHASTFHQFDFDT--------FGKYDYSRSGNPTREALEDIIAELEGGTKGFAFA 76 (390)
T ss_pred cccceeeCCCCCC--CCCCCccCCcccCcceecCcccc--------cCCCcccCCCChhHHHHHHHHHHHhCCCCeEEEC
Confidence 6789999986542 23689999999999999887543 2468899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
|||.|+.+++. ++++||+||++++.|++++..+...++..|+++.+++..|++++++++++ +|++|++|+|+||||.+
T Consensus 77 sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~-~tklV~l~~p~NptG~~ 154 (390)
T PRK08064 77 SGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEVAQNIKP-NTKLFYVETPSNPLLKV 154 (390)
T ss_pred CHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCcEe
Confidence 99999988886 78999999999999999888777777888999999999899999999987 49999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~ 391 (541)
.|+++|.++|+++|+++|+|++|+.+....+.++|+|++++|+||+++|++++++|+++.+ ++++++++..+..+|..+
T Consensus 155 ~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~ 234 (390)
T PRK08064 155 TDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVL 234 (390)
T ss_pred ccHHHHHHHHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998877777788999999999999999999889988775 678899988888889999
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHH
Q 009167 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~ 471 (541)
++..+|+++++++++..|++++.+++..++++|+++|.|.+|+||+|+++|+|++++++++|+|+|++|++++ .+.+.+
T Consensus 235 ~~~~a~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~-~~~~~~ 313 (390)
T PRK08064 235 GVQDCWLVLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS-EEAVRQ 313 (390)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999974 678899
Q ss_pred HHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
|+++|+++.+++|+|+.+|++++|+.++|+.++.+.+...|+++++||||+|+||++|+|+||++||+++
T Consensus 314 f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 314 FVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred HHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999863
No 43
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=2.7e-61 Score=514.07 Aligned_cols=381 Identities=30% Similarity=0.513 Sum_probs=343.5
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhccc----CCCccCCCCchhHHHHHHHHHHHhCCCcE
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR----ASFEYGRYGNPTTVVVEEKMSALEGAEST 228 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~----~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~ 228 (541)
..+.++|+|...+ .+++++||||+|+||.|++.+++.+.+.+.. .+|.|+|++||+.++||++||+++|.+.+
T Consensus 18 ~~~~~~~~~~~~~---~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~lA~l~g~~~~ 94 (418)
T PLN02242 18 PAAALASARHEFG---EHGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQMAALEGTEAA 94 (418)
T ss_pred hHHHHhcCCCCCC---CCCCccCCcccCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHHHHHHhCCCeE
Confidence 5678899997653 2467899999999999999988877665432 35899999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcc-cCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCC
Q 009167 229 VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 307 (541)
Q Consensus 229 i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~-~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~N 307 (541)
++++||++|+.+++.+++++||+|+++.+.|+++...+...+. ..|+++++++..|+++++++++++++++|++++|+|
T Consensus 95 l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~N 174 (418)
T PLN02242 95 YCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESISN 174 (418)
T ss_pred EEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCCC
Confidence 9999999999999999999999999999999988776655443 479999999988999999999763499999999999
Q ss_pred CCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh---
Q 009167 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--- 384 (541)
Q Consensus 308 PtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--- 384 (541)
|||.+.|+++|+++|+++|++||+|++|. .+..++..+|+|++++|+||+++|++++++|++++++++++.++...
T Consensus 175 PtG~v~dl~~I~~la~~~gi~livDea~~-~~~~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~ 253 (418)
T PLN02242 175 PTLTVADIPELARIAHEKGVTVVVDNTFA-PMVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGA 253 (418)
T ss_pred CCCcccCHHHHHHHHHHhCCEEEEECCCC-ccCCCHHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhh
Confidence 99999999999999999999999999996 44467777899999999999999999999999999999988887653
Q ss_pred -hhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhc---cCcccEEEE
Q 009167 385 -HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM---TGFGGVVSF 460 (541)
Q Consensus 385 -~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~---~g~g~~vsf 460 (541)
...|..+++..++++.++++++..|++++.+++..++++|++++ + +|.||+|++||+|+++++|+ .|+|+|++|
T Consensus 254 ~~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~-~-~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf 331 (418)
T PLN02242 254 LMLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG-L-KVIYPGLEDHPQHALLKSMANKGYGFGGLLCL 331 (418)
T ss_pred hhccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC-C-EEECCCCCCCccHHHHHHhcccCCCceeEEEE
Confidence 34677888999999999999999999999999999999999996 3 89999999999999999999 589999999
Q ss_pred EEcCCHHHHHHHHHHccCc----CeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHH
Q 009167 461 EVDGDLTATIKFIDALKIP----YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED-FEDLKADVL 535 (541)
Q Consensus 461 ~l~~~~~~~~~~l~~L~~~----~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~-~edli~dL~ 535 (541)
+++ +.+.+.+|+++|+++ .+++|||+++|++++|+.++|..++.+++...|+++++||||+|+|+ .+|||+||+
T Consensus 332 ~l~-~~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~~dli~dl~ 410 (418)
T PLN02242 332 DMD-TEERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYTGTLEQRWSQFE 410 (418)
T ss_pred EEC-CHHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCCCCHHHHHHHHH
Confidence 996 467899999999977 88999999999999999999999999999999999999999999995 999999999
Q ss_pred HHHhh
Q 009167 536 QALHA 540 (541)
Q Consensus 536 ~AL~~ 540 (541)
+||++
T Consensus 411 ~al~~ 415 (418)
T PLN02242 411 KALSA 415 (418)
T ss_pred HHHHH
Confidence 99986
No 44
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=3.9e-60 Score=497.07 Aligned_cols=356 Identities=35% Similarity=0.569 Sum_probs=322.7
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|.++|.|...+ ..+++++||||+|+||.|++.. ...+|.|+|+++|+.++||++||+++|++.+++++
T Consensus 7 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~--------~~~~~~Y~R~~~p~~~~le~~lA~leg~~~~v~~~ 76 (364)
T PRK07269 7 INTILAQAGIKSD--EATGALVTPLHFSTTYQHPEFG--------QSTGFDYTRTKNPTRAKLEETLAAIESADYALATS 76 (364)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCCC--------CcCCcceeCCCCccHHHHHHHHHHHhCCCeEEEeC
Confidence 6799999996542 2368999999999999988731 23479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+.+++ .++++||+||++.+.|+++..++....+..++++.+. .|++++++++++ +||+|++|+|+||+|.+
T Consensus 77 sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~--~d~~~l~~~i~~-~TklV~lesP~NPtg~~ 152 (364)
T PRK07269 77 SGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYA--NTEEELIAAIEE-DTDIVYIETPTNPLMVE 152 (364)
T ss_pred CHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEec--CCHHHHHHhcCc-CceEEEEECCCCCCCee
Confidence 9999999988 4679999999999999998877665555556665543 589999999987 49999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCc
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~ 391 (541)
.|+++|+++|+++|+++|+|++|+.++..+++.+|+|++++|+||+++||+|+++|+++. ++++.++++..+...|..+
T Consensus 153 ~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~ 232 (364)
T PRK07269 153 FDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVL 232 (364)
T ss_pred eCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999888788899999999999999999999999999887 4678888887776778899
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHH
Q 009167 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~ 471 (541)
+++.+|+++++|+++..|++++.+|+..++++|++||.|.+|.||+ .|++++|++. +.+.+.+
T Consensus 233 s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg----------------~gg~~sf~~~-~~~~~~~ 295 (364)
T PRK07269 233 SPFDSYLLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG----------------KGGMISFKVA-DETRIPH 295 (364)
T ss_pred CHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC----------------cCcEEEEEEC-CHHHHHH
Confidence 9999999999999999999999999999999999999999999997 4899999997 4677899
Q ss_pred HHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
|++.++.+.+++|||+.+|++++|+.++|..++.+.|...|+.+++||||||+||.+|||+||++||+
T Consensus 296 f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE~~~dli~dl~~al~ 363 (364)
T PRK07269 296 ILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIEDARDLIADLKQALE 363 (364)
T ss_pred HHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999996
No 45
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=4.5e-59 Score=493.68 Aligned_cols=374 Identities=35% Similarity=0.553 Sum_probs=340.4
Q ss_pred ccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeCCH
Q 009167 155 SLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASG 234 (541)
Q Consensus 155 t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSG 234 (541)
..++|++... ..+++++||||+|+||.|++.+++.+.+.+....|.|+|+++|+.++||+++|+++|++.+++++||
T Consensus 11 ~~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG 87 (389)
T PRK05968 11 AALITAHDEG---NAFDAVVPPIFQTSLFTFDSYDEMEDVYAGEKVRPIYSRGDNPTVRAFEEMLAKLEGAEDARGFASG 87 (389)
T ss_pred hheeecCCCc---cCCCCccCCccCCcceecCCHHHHHHhhcCCCCCccccCCCChhHHHHHHHHHHHhCCCcEEEECCH
Confidence 3467887543 3478999999999999999998888777666667999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc
Q 009167 235 MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 314 (541)
Q Consensus 235 s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d 314 (541)
++|+.+++.+++++||+|+++.+.|++++..+...++..|++++++|..|++++++++ + ++++|++|+|+|+++.+.|
T Consensus 88 ~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~d 165 (389)
T PRK05968 88 MAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKAL-P-GAKLLYLESPTSWVFELQD 165 (389)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhc-c-cCCEEEEECCCCCCCcHHH
Confidence 9999999999999999999999999999888877778889999999999999999998 4 4899999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-hcCCCchH
Q 009167 315 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGALNP 393 (541)
Q Consensus 315 l~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G~~~s~ 393 (541)
+++|+++|+++|+++|+|++|+.+...++..+|+|++++|+||+++|++++++|+++++++++++++.... .+|..+++
T Consensus 166 l~~i~~la~~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~ 245 (389)
T PRK05968 166 VAALAALAKRHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSP 245 (389)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCCh
Confidence 99999999999999999999998877778888999999999999999998889999999998888876443 46778999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHH
Q 009167 394 NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFI 473 (541)
Q Consensus 394 ~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l 473 (541)
..+++++++++++..|++++.+++++++++|+++|.|..|.||++++||. +++.|+|+|++|+++++ ....+|+
T Consensus 246 ~~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~-----~~~~g~g~~~sf~~~~~-~~~~~f~ 319 (389)
T PRK05968 246 FEAWLLLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPP-----AGLSGTSGLFSFIFREG-IDVRAFA 319 (389)
T ss_pred HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChH-----HhCCCCceEEEEEECCH-HHHHHHH
Confidence 99999999999999999999999999999999999999999999999983 55688999999999853 5788999
Q ss_pred HHccCcCeecccCCcccccccCccccccC-CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 474 DALKIPYIAPSFGGCESIVDQPAIMSYWD-LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 474 ~~L~~~~iavS~G~~~sl~~~pa~~~~~~-~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
++|+.+++++|+|+.+|+++ |+.++|.. .+.+.+...|+++++||||+|+||++|||+||++||++
T Consensus 320 ~~L~~~~~~~s~G~~~slv~-p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 320 DALKLFRLGVSWGGHESLVV-PAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred HhCCccEEecCCCCCCceee-eCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999 99988887 45778888999999999999999999999999999985
No 46
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=3.9e-59 Score=490.54 Aligned_cols=363 Identities=35% Similarity=0.564 Sum_probs=322.0
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
++.|+++|.|...+ ..+++++||||+|+||.|++.+ +..+|.|+||++|+..+|+++||+++ .++++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~ry~~p~~~~Le~~lA~l~-~~~~v~~ 71 (366)
T PRK07582 3 GDGTRSVHAGGPEA--VPGEPVLPGPVFAAPYHLSPGE--------PTGPDTYGRASNPTWRALEAALGELE-GAEALVF 71 (366)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccccceEEccCcc--------ccCCceeECCCCccHHHHHHHHHHHc-CCCEEEE
Confidence 47899999985432 2368999999999999998531 22468899999999999999999999 6789999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++++.|+++..++...++.+|+++++++..+... .+.+ ++++|++|+|+||+|.
T Consensus 72 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~---~~~~-~t~lV~le~p~NPtg~ 147 (366)
T PRK07582 72 PSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE---AALA-GADLVLAETPSNPGLD 147 (366)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH---Hhcc-CceEEEEECCCCCCCC
Confidence 99999999999999999999999999999987776666777899999998765432 2334 4999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~ 390 (541)
+.|+++|+++|+++|+++|+|++|+.+....++++|+|++++|+||+++|++++++|++++ +++++++++..+...|..
T Consensus 148 v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~ 227 (366)
T PRK07582 148 VCDLAALAAAAHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAI 227 (366)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998777677888899999999999999999999999987 478888888888888889
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~ 470 (541)
++++.+|+++++++++..|++++++|+..++++|+++|.|.+|+||+|++||+|+++++||+|+|+|++|+++ +.+.+.
T Consensus 228 ~~~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~~~~~~ 306 (366)
T PRK07582 228 PGPFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-DAAAAE 306 (366)
T ss_pred CCHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-CHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 567899
Q ss_pred HHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+|+++++++.+++|||+++|++.++... ..++++++||||+|+||++|+|+||++||+++
T Consensus 307 ~~~~~l~~~~~~~s~G~~~sl~~~~~~~-----------~~~~~~~liR~svGlE~~~dli~dl~~al~~~ 366 (366)
T PRK07582 307 RFVAASRLVVAATSFGGVHTSADRRARW-----------GDAVPEGFVRLSCGIEDTDDLVADLERALDAL 366 (366)
T ss_pred HHHHhCCcceecccCCCccchhhhHHHc-----------CCCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999986543221 12367899999999999999999999999875
No 47
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=1.5e-57 Score=478.67 Aligned_cols=362 Identities=34% Similarity=0.592 Sum_probs=330.0
Q ss_pred CCCccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEE
Q 009167 150 LSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTV 229 (541)
Q Consensus 150 ~~~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i 229 (541)
|++++|.++|.|...+ ..+++++||||+|+||.|++.+ +..+|.|+||+||+.++||++||+++|++.++
T Consensus 2 ~~~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~pt~~~le~~la~l~g~~~~~ 71 (366)
T PRK08247 2 MSTIETKLAQIGNRSD--ERTGTVNPPVYFSTAYRHEGIG--------ESTGFDYSRTGNPTRGVLEQAIADLEGGDQGF 71 (366)
T ss_pred CCCcchhheeCCCCCC--CCCCCccCCcccCcccccCCCC--------CcCCccccCCCCchHHHHHHHHHHHhCCCcEE
Confidence 4568899999995542 2468999999999999887632 23479999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCC
Q 009167 230 IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPF 309 (541)
Q Consensus 230 ~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPt 309 (541)
+++||++|+.+++ .++++||+|+++++.|++++..+...++.+|+++.+++..|++++++++++ ++++|++|+|+||+
T Consensus 72 ~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~-~tklv~le~P~NP~ 149 (366)
T PRK08247 72 ACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIEQAITP-NTKAIFIETPTNPL 149 (366)
T ss_pred EEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHHHHhccc-CceEEEEECCCCCC
Confidence 9999999998765 678999999999999999988887778889999999999999999999987 59999999999999
Q ss_pred CccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcC
Q 009167 310 LRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG 388 (541)
Q Consensus 310 G~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G 388 (541)
|.+.|+++|+++|+++|+++|+|++|+.++...+...|+|++++|+||+++|++++++|+++++ +++.++++..+...|
T Consensus 150 ~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g 229 (366)
T PRK08247 150 MQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAG 229 (366)
T ss_pred CcHHHHHHHHHHHHHcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999988887788888999999999999999999999999986 678888887777778
Q ss_pred CCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHH
Q 009167 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA 468 (541)
Q Consensus 389 ~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~ 468 (541)
..+++..+++++++++++..|++++.+++..++++|+++|.+..|.||+ .|++++|++++ .+.
T Consensus 230 ~~~s~~~a~l~~~~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~----------------~gg~~sf~~~~-~~~ 292 (366)
T PRK08247 230 AVLSPFDSWLLIRGMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPG----------------RGGMLSFRLQD-EEW 292 (366)
T ss_pred CCCChHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCC----------------cCcEEEEEECC-HHH
Confidence 8889999999999999999999999999999999999999999999986 47899999974 566
Q ss_pred HHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 469 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 469 ~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+|++.++.+.+++|||+.++++++|+.++|..++.+.|...|+.+++||||+|+|+.+|||+||++||++
T Consensus 293 ~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGlE~~~dl~~dl~~al~~ 364 (366)
T PRK08247 293 VNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGIENVEDLIADLKQAFKQ 364 (366)
T ss_pred HHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 789999999999999999999999999999999999999999999999999999999999999999999985
No 48
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-31 Score=270.89 Aligned_cols=319 Identities=19% Similarity=0.196 Sum_probs=240.8
Q ss_pred HHHhcccCCCccCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh--c----cCCCEEEEcCCCCcchHH
Q 009167 193 DFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL--V----PAGGHIVTTTDCYRKTRI 264 (541)
Q Consensus 193 ~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~al--l----~pGd~Vlv~~~~y~~~~~ 264 (541)
..|+|+++.|.|||......++.|+++|+++|++ +.+|+++|+++++++|.+. . +.|.|||++..+|+++..
T Consensus 27 ~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~ 106 (386)
T COG1104 27 EVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLN 106 (386)
T ss_pred hhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHH
Confidence 3567888899999999999999999999999984 4555556679999999873 2 247899999999999998
Q ss_pred HHHhhcccCCeEEEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-
Q 009167 265 FIETVLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP- 338 (541)
Q Consensus 265 ~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~- 338 (541)
.++.+ +..|.+|++++++ |+++|+++|+++ |.+|.+...||.+|.++|+++|.++|+++|+++++|.+++.+
T Consensus 107 ~~~~L-e~~g~~Vtyl~V~~~G~v~~e~L~~al~~~-T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gk 184 (386)
T COG1104 107 TCRYL-ERQGFEVTYLPVDSNGLVDLEQLEEALRPD-TILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGK 184 (386)
T ss_pred HHHHH-HhcCCeEEEeCCCCCCeEcHHHHHHhcCCC-ceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCc
Confidence 88655 7789999998865 899999999985 999999999999999999999999999999999999998874
Q ss_pred CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHH-H-HHHHHhh---hcCCCchHHH--H--HHHHHhHHHHHHH
Q 009167 339 LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV-T-QIRNLHH---VLGGALNPNA--A--YLIIRGMKTLHLR 409 (541)
Q Consensus 339 ~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li-~-~l~~~~~---~~G~~~s~~~--a--~l~l~~l~tl~~r 409 (541)
++.+...+++|++..|.||++|+.| .|+++.++... . .+..-.+ ...++.+... + .++....+.+...
T Consensus 185 ipi~~~~~~vD~ls~SaHK~~GpkG---iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~ 261 (386)
T COG1104 185 IPIDLEELGVDLLSFSAHKFGGPKG---IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEE 261 (386)
T ss_pred eeccccccCcceEEeehhhccCCCc---eEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 5677777789999999999999988 67777654321 1 1111111 1112222211 1 1122234455556
Q ss_pred HHHHHHHHHHHHHHHHhC-CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCc
Q 009167 410 VQQQNSTALRMAKILEAH-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~~-p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
.++....+.++.+.|.+. |.+.-...+ . ...++++.|.+++ .+.+.++..|+..+|++|.|++
T Consensus 262 ~~~~~~lr~~l~~~l~~~~p~~~~~g~~------~--------~rlP~~~~~~f~g--v~gE~ll~~L~~~gI~vStGSA 325 (386)
T COG1104 262 NARLRKLRDRLEDGLLEIIPDVYLNGDD------E--------PRLPNILNFSFPG--VEGESLLLALDLAGIAVSTGSA 325 (386)
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEcCCc------c--------cCCCCeEEEEeCC--CcHHHHHHhccccCeEEecccc
Confidence 666667777788888765 544221111 1 1246789999987 4678888899999999999988
Q ss_pred ccccccCccccccCCCHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 489 ESIVDQPAIMSYWDLSQSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~----~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
|+.. ..-+.+.+.++|++ .+.||||+|..++++.++.+.++|.+
T Consensus 326 CsS~--------~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~ 373 (386)
T COG1104 326 CSSG--------SLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKE 373 (386)
T ss_pred ccCC--------CCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHH
Confidence 7642 12245677888886 37899999999998888888777764
No 49
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=2.7e-26 Score=243.28 Aligned_cols=308 Identities=20% Similarity=0.229 Sum_probs=226.2
Q ss_pred CCCccCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHH-HHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009167 200 ASFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 200 ~~~~Y~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs-~Ai~~al~al---l~pGd~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
+.|..+.+.....++.|+++|+++|++ +.|+|+.|+ ++++++..++ +++||+||++..+|++....++...++.
T Consensus 56 ~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~ 135 (405)
T COG0520 56 GAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRT 135 (405)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhc
Confidence 344555555567889999999999985 567776665 9999999988 6999999999999999988888878888
Q ss_pred CeEEEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccC
Q 009167 274 GITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLG 347 (541)
Q Consensus 274 Gi~v~~vd~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~g 347 (541)
|+++++++.+ ++++++..+++ +||+|.+.+.+|.||.+.|+++|+++||++|++++||.+++.+ .+.+..++|
T Consensus 136 Ga~v~~i~~~~~g~~~~~~~~~~i~~-~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~ 214 (405)
T COG0520 136 GAKVRVIPLDDDGLLDLDALEKLITP-KTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELG 214 (405)
T ss_pred CcEEEEEecCCCCCcCHHHHHHhcCC-CceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcC
Confidence 9999988743 68999998887 5999999999999999999999999999999999999998875 456777889
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh----------------------hcCCCchHHHHHHHHHhHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH----------------------VLGGALNPNAAYLIIRGMKT 405 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~----------------------~~G~~~s~~~a~l~l~~l~t 405 (541)
+|++++|.|||+.|+. ..|++++++++.+.+..... .-.++++....+.+..+++.
T Consensus 215 ~Df~afsgHKwl~gP~--GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~ 292 (405)
T COG0520 215 CDFLAFSGHKWLLGPT--GIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDY 292 (405)
T ss_pred CCEEEEcccccccCCC--ceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHH
Confidence 9999999999666663 27999999999887732211 11122222222222223332
Q ss_pred HH-----HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcC
Q 009167 406 LH-----LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 480 (541)
Q Consensus 406 l~-----~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~ 480 (541)
+. ...++..+..+++.+.|++.|.++-. .|.. ...+++++|.+++. ....+...|...+
T Consensus 293 ~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~-g~~~-------------~~r~~~vsF~v~~~--~~~dv~~~L~~~g 356 (405)
T COG0520 293 LLEIGMEAIEAHERELTEYLLEGLSELPGVEIY-GPPD-------------ADRGGIVSFNVKGI--HPHDVATLLDEKG 356 (405)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCCc-------------ccCceEEEEEeCCC--CHHHHHHHHHhCC
Confidence 21 12233335667777888888887543 3321 01578999999873 2344445555567
Q ss_pred eecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 481 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 481 iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
|++..|..+.. |. .+..++ ++.+|+|++..++++.++.|.++|+++
T Consensus 357 I~vr~g~~ca~---p~-----------~~~~~~-~~~iR~S~~~YNt~edid~l~~aL~~~ 402 (405)
T COG0520 357 IAVRAGHHCAQ---PL-----------HRLLGV-DATIRASLHLYNTEEDVDRLLEALKKA 402 (405)
T ss_pred eEEEecccccc---HH-----------HHhcCC-CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 88888865432 11 122333 345999999999999999999999863
No 50
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=3.3e-26 Score=243.55 Aligned_cols=297 Identities=15% Similarity=0.164 Sum_probs=208.2
Q ss_pred CCCchhHHHHHHHHHHHhCC-C-cEE-EeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEE
Q 009167 206 RYGNPTTVVVEEKMSALEGA-E-STV-IMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~-e-~~i-~~sSGs~Ai~~al~al----l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~ 278 (541)
+......+++|++||+++|+ + +.| +++|+++++++++.++ +++||+|++++++|++.+..+....+..|++++
T Consensus 59 ~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~ 138 (401)
T PRK10874 59 QRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVV 138 (401)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEE
Confidence 33345678899999999998 3 344 4555669999999887 479999999999999876666566677899888
Q ss_pred EeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEE
Q 009167 279 VIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (541)
Q Consensus 279 ~vd~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv 352 (541)
.++. .|++++++++++ +|++|++++|+||||.++|+++|.++|+++|+++|+|++++.+ .+.+...+++|+++
T Consensus 139 ~v~~~~~~~~d~~~l~~~i~~-~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~ 217 (401)
T PRK10874 139 KLPLGADRLPDVDLLPELITP-RTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYA 217 (401)
T ss_pred EEecCCCCcCCHHHHHHhcCc-CcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEE
Confidence 8764 378999999987 4999999999999999999999999999999999999998743 33444456899999
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHhh---------------------hcCCCchHHHHHHHHHhHHHHHH---
Q 009167 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTLHL--- 408 (541)
Q Consensus 353 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~s~~~a~l~l~~l~tl~~--- 408 (541)
.|+||++|++| .|+++.++++++.+..... ...++.+......+..+++.+..
T Consensus 218 ~s~~K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~ 294 (401)
T PRK10874 218 FSGHKLYGPTG---IGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDI 294 (401)
T ss_pred EecccccCCCc---cEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCH
Confidence 99999888776 5899999888776543210 00112232223233333433321
Q ss_pred --HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccC
Q 009167 409 --RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 409 --r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G 486 (541)
..++..+.++++.+.|+++|.+..+..| .+++++|.+++- ....+.+.|...++.++.|
T Consensus 295 ~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~-----------------~~~i~~~~~~~~--~~~~~~~~L~~~gI~v~~g 355 (401)
T PRK10874 295 NQAESWSRSLATLAEDALAKLPGFRSFRCQ-----------------DSSLLAFDFAGV--HHSDLVTLLAEYGIALRAG 355 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEeCCC-----------------CCcEEEEEECCc--CHHHHHHHHHHCCcEEecc
Confidence 1233345567777777777665422111 245888888642 2345556666668888877
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 487 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 487 ~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..++. .....+|. .+.||+|++..++++.++.+.++|++
T Consensus 356 ~~~~~--------------~~~~~~g~-~~~iRiS~~~~nt~edid~ll~al~~ 394 (401)
T PRK10874 356 QHCAQ--------------PLLAALGV-TGTLRASFAPYNTQSDVDALVNAVDR 394 (401)
T ss_pred ccchH--------------HHHHHhCC-CCEEEEEecccCCHHHHHHHHHHHHH
Confidence 54321 11122343 47999999998888888888777764
No 51
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=5.8e-26 Score=242.16 Aligned_cols=300 Identities=16% Similarity=0.165 Sum_probs=210.9
Q ss_pred CCCCchhHHHHHHHHHHHhCC-C-cEEE-eCCHHHHHHHHHHH----hccCCCEEEEcCCCCcchHHHHHhhcccCCeEE
Q 009167 205 GRYGNPTTVVVEEKMSALEGA-E-STVI-MASGMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~-e-~~i~-~sSGs~Ai~~al~a----ll~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v 277 (541)
++......+++|++||+++|. + +.|+ +++++++++.++.+ ++++||+|++++++|++....+...++..|+++
T Consensus 62 ~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v 141 (406)
T PRK09295 62 SAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAEL 141 (406)
T ss_pred HHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEE
Confidence 333445678899999999996 2 3444 44556999988876 468999999999999987766666667789988
Q ss_pred EEeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEE
Q 009167 278 TVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLV 351 (541)
Q Consensus 278 ~~vd~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDiv 351 (541)
+.++. .|+++|++++++ ++++|++++|+||||.++|+++|.++|+++|+++++|++++.+. ..+...+++|++
T Consensus 142 ~~v~~~~~~~~d~~~l~~~i~~-~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~ 220 (406)
T PRK09295 142 RVIPLNPDGTLQLETLPALFDE-RTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY 220 (406)
T ss_pred EEEecCCCCCCCHHHHHHhcCC-CcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEE
Confidence 88763 378999999987 49999999999999999999999999999999999999987653 334445789999
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhh----------------------hcCCCchHHHHHHHHHhHHHHH--
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH----------------------VLGGALNPNAAYLIIRGMKTLH-- 407 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~----------------------~~G~~~s~~~a~l~l~~l~tl~-- 407 (541)
+.|+||++|++| .|+++.++++++.+..... ...++.+....+.+..+++.+.
T Consensus 221 ~~s~~K~~gp~G---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~ 297 (406)
T PRK09295 221 VFSGHKLYGPTG---IGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSAL 297 (406)
T ss_pred EeehhhccCCCC---cEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHh
Confidence 999999888776 5888888887665432110 0112333333333333343322
Q ss_pred ---HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecc
Q 009167 408 ---LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 484 (541)
Q Consensus 408 ---~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS 484 (541)
...++..+.+.++.+.|.+.+.++ +..|. ..+++++|.+++. ....+...|...+|.++
T Consensus 298 g~~~i~~~~~~l~~~l~~~l~~~~~~~-~~~~~---------------~~~~iv~~~~~~~--~~~~~~~~L~~~gI~v~ 359 (406)
T PRK09295 298 GLNNIAEYEQNLMHYALSQLESVPDLT-LYGPQ---------------NRLGVIAFNLGKH--HAYDVGSFLDNYGIAVR 359 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCCC---------------CCceEEEEEECCc--CHHHHHHHHHhCCeEEe
Confidence 122334455666777777766653 32221 0256899998752 23345556666788888
Q ss_pred cCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 485 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 485 ~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
.|..++. + ....+|. ++.||+|++..++++.++.|.++|+++
T Consensus 360 ~g~~c~~---~-----------~~~~~~~-~~~iRiS~~~ynt~~did~l~~~l~~i 401 (406)
T PRK09295 360 TGHHCAM---P-----------LMAYYNV-PAMCRASLAMYNTHEEVDRLVAGLQRI 401 (406)
T ss_pred ccccchH---H-----------HHHHHCC-CCEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 8865431 1 1122343 468999999999999999999998753
No 52
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=1.4e-25 Score=238.56 Aligned_cols=294 Identities=16% Similarity=0.165 Sum_probs=206.5
Q ss_pred chhHHHHHHHHHHHhCCC--c-EEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 209 NPTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e--~-~i~~sSGs~Ai~~al~al----l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
....+++|+.+|+++|.+ + +++++++++++++++.++ +++||+|++++++|++.+..+...++..|++++.++
T Consensus 59 ~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 138 (398)
T TIGR03392 59 TARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLP 138 (398)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEe
Confidence 345678999999999973 3 455556669999999887 589999999999999866555556677899988876
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEEECC
Q 009167 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 355 (541)
Q Consensus 282 ~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv~S~ 355 (541)
. .|++++++++++ +|++|++++|+||||.++|+++|.++|+++|+++++|++++.+ ...+....++|+++.|+
T Consensus 139 ~~~~~~~~~~~l~~~i~~-~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~ 217 (398)
T TIGR03392 139 IGADLLPDIRQLPELLTP-RTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSG 217 (398)
T ss_pred cCCCCCcCHHHHHHHhcc-CceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEec
Confidence 4 278999999987 4999999999999999999999999999999999999998654 23344456899999999
Q ss_pred ccccCCCCCceEEEEEeChHHHHHHHHHhh---------------------hcCCCchHHHHHHHHHhHHHH-----HHH
Q 009167 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLR 409 (541)
Q Consensus 356 sK~lgg~gd~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~s~~~a~l~l~~l~tl-----~~r 409 (541)
||++|+.| .|+++.++++++.+..... .-.++.+......+..+++.+ ...
T Consensus 218 ~K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i 294 (398)
T TIGR03392 218 HKLYGPTG---IGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAA 294 (398)
T ss_pred ccccCCCc---eEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHH
Confidence 99888765 6899998888776643210 001222222222222333322 122
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcc
Q 009167 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 489 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~ 489 (541)
.++..+.++++.+.|.+.+.+.-...| .+++++|.+++. ....+.+.|+..+|.++.|..+
T Consensus 295 ~~~~~~l~~~l~~~l~~l~g~~~~~~~-----------------~~~i~~~~~~~~--~~~~l~~~L~~~gI~v~~g~~~ 355 (398)
T TIGR03392 295 EAWSVSLADLAEERLAQLPGFRSFRCP-----------------GSSLLAFDFAGV--HHSDLAALLAESGIALRAGQHC 355 (398)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEeCCC-----------------CCcEEEEEeCCc--CHHHHHHHHHhCCEEEecCccc
Confidence 233445666777777776665422111 245888888742 2345666777778888887654
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+. .....+|. ++.||+|++..++++.++.+.++|++
T Consensus 356 ~~--------------~~~~~~g~-~~~iRvS~~~~~t~~ei~~l~~~l~~ 391 (398)
T TIGR03392 356 AQ--------------PLMAALGV-SGTLRASFAPYNTQQDVDALVDAVGA 391 (398)
T ss_pred hH--------------HHHHHhCC-CCEEEEEeeccCCHHHHHHHHHHHHH
Confidence 31 11122333 47999999998888878888777754
No 53
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-24 Score=231.29 Aligned_cols=287 Identities=16% Similarity=0.179 Sum_probs=198.5
Q ss_pred hhHHHHHHHHHHHhCC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC--
Q 009167 210 PTTVVVEEKMSALEGA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~----e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~-- 282 (541)
+..+.+++.+++..|. ++.|++++|+ +++..++.+++++||+|++++|+|..... .++..|+++.+++.
T Consensus 69 ~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~~~~ 144 (389)
T PRK05957 69 PLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM----AITMAGCQPILVPTDD 144 (389)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH----HHHhcCCEEEEeecCC
Confidence 5567778888888775 3456666555 89999999999999999999999987543 23456888877754
Q ss_pred ---CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-----ccc----ccC
Q 009167 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL----SLG 347 (541)
Q Consensus 283 ---~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-----~~~----~~g 347 (541)
.|++++++++++ ++|+|++.+|+||||.+++ +++|+++|+++|+++|+|++|...... ... ...
T Consensus 145 ~~~~d~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 223 (389)
T PRK05957 145 NYQLQPEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGN 223 (389)
T ss_pred CCCcCHHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccC
Confidence 378999999987 4999999999999999998 788999999999999999998743321 111 112
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~a~~la~~ 423 (541)
..+++.|+||.+|.+| .+.|++++++++++++.......+...+......+...++. +....++..++++.+.+.
T Consensus 224 ~~i~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~ 302 (389)
T PRK05957 224 HTISLYSLSKAYGFAS-WRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKS 302 (389)
T ss_pred cEEEEecchhhccCcc-ceeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 4588999999998666 45899999999999998776655544444444444444432 344445556677778888
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCcccccccCccccccC
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
|++.+.+..+..| ..|.++|++++.+ ....+|.+.|. ..++.+..|..+..
T Consensus 303 L~~~~~~~~~~~~----------------~gg~~~~~~~~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~----------- 354 (389)
T PRK05957 303 LGQLQDRCTLHPA----------------NGAFYCFLKVNTD-LNDFELVKQLIREYRVAVIPGTTFGM----------- 354 (389)
T ss_pred HHhcCCCccccCC----------------CeeEEEEEeCCCC-CChHHHHHHHHHHCCEEEccchhhCC-----------
Confidence 8765443222111 1355778888643 23455666653 46888887754321
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHH---HHHHHHHHHhh
Q 009167 503 LSQSERLKYGIMDNLVRFSFGVEDFED---LKADVLQALHA 540 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~e~~ed---li~dL~~AL~~ 540 (541)
..++++|||+|..+.++ .++.|.+.+++
T Consensus 355 ----------~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 355 ----------KNGCYLRIAYGALQKATAKEGIERLVQGLKT 385 (389)
T ss_pred ----------CCCCEEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 01468999999766544 44445554443
No 54
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=9e-25 Score=234.35 Aligned_cols=299 Identities=18% Similarity=0.202 Sum_probs=209.0
Q ss_pred hhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHH----hccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e---~~i~~sSGs~Ai~~al~a----ll~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...+++|+.||+++|.+ +++++++++++++.++.+ .+++||+|+++.++|++.+..+....+..|++++.++.
T Consensus 76 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~ 155 (424)
T PLN02855 76 DAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGL 155 (424)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEec
Confidence 45678999999999972 355555666999998876 36899999999999998776676666778988888764
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCc
Q 009167 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSAT 356 (541)
Q Consensus 283 -----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~s 356 (541)
.|++++++++++ ++++|++++|+||||.++|+++|.++|+++|+++++|++++.+. +.+..++++|+++.|+|
T Consensus 156 ~~~~~~~~~~l~~~i~~-~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 234 (424)
T PLN02855 156 TPDEVLDVEQLKELLSE-KTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSH 234 (424)
T ss_pred CCCCCcCHHHHHHHhcc-CceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecc
Confidence 278999999987 59999999999999999999999999999999999999987543 34455678999999999
Q ss_pred cccCCCCCceEEEEEeChHHHHHHHHHhh---------------------hcCCCchHHHHHHHHHhHHHH-----HHHH
Q 009167 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLRV 410 (541)
Q Consensus 357 K~lgg~gd~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~s~~~a~l~l~~l~tl-----~~r~ 410 (541)
|++|++| .|+++.++++++++..... ...++.+....+.+..+++.+ ....
T Consensus 235 K~~gp~G---~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~ 311 (424)
T PLN02855 235 KMCGPTG---IGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIH 311 (424)
T ss_pred cccCCCc---cEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 9887665 6889888887766542210 001122222222222333322 1122
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCc-CeecccCCcc
Q 009167 411 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCE 489 (541)
Q Consensus 411 ~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~-~iavS~G~~~ 489 (541)
++..+.+.++.+.|++.+.++ +..|. .+++. ..+++++|.+++ .....+.+.|... +|.++.|..+
T Consensus 312 ~~~~~l~~~l~~~L~~~~g~~-i~~~~-~~~~~---------~r~~~v~~~~~~--~~~~~v~~~L~~~~gI~v~~g~~c 378 (424)
T PLN02855 312 EYEVELGTYLYEKLSSVPGVR-IYGPK-PSEGV---------GRAALCAFNVEG--IHPTDLSTFLDQQHGVAIRSGHHC 378 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCC-ccccc---------CcccEEEEEECC--cCHHHHHHHhcccCCEEEechhhh
Confidence 333455666777777776664 33331 11010 136799999975 2345677777655 8888877654
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+. + ....+|+ ++.||+|++..++++.++.|.++|++
T Consensus 379 ~~---~-----------~~~~~g~-~~~iRiS~~~ynt~~di~~l~~~l~~ 414 (424)
T PLN02855 379 AQ---P-----------LHRYLGV-NASARASLYFYNTKEEVDAFIHALKD 414 (424)
T ss_pred hH---H-----------HHHHhCC-CCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 31 0 1123454 46899999999888888888888764
No 55
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.94 E-value=4.9e-25 Score=230.08 Aligned_cols=289 Identities=18% Similarity=0.247 Sum_probs=215.7
Q ss_pred ccCCCCchhHHHHHHHHHHHhC-CC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEE
Q 009167 203 EYGRYGNPTTVVVEEKMSALEG-AE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g-~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
.+.||+++...+|++++|+++| .+ +.|+.++|+ +.|..++++++.+||.|++..|+|.... ..++..|.++..
T Consensus 50 ~~~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~----~~a~~~g~~~~~ 125 (356)
T COG0079 50 KLNRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYE----IAAQLAGAEVVK 125 (356)
T ss_pred hhccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHH----HHHHhcCCeEEE
Confidence 5789999999999999999999 43 678878887 8999999999999999999999997643 345567888877
Q ss_pred eCC----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC--CCEEEEeCCCCCCCcccccc----cCCc
Q 009167 280 IDP----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALS----LGAD 349 (541)
Q Consensus 280 vd~----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~--gi~lIvDea~a~~~~~~~~~----~gaD 349 (541)
++. .|++.+.+++.+ ++++||+++||||||...+.++|.+++... +.+||+||+|..+...+... ...-
T Consensus 126 v~~~~~~~d~~~~~~~~~~-~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nl 204 (356)
T COG0079 126 VPLKEFRLDLDAILAAIRD-KTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNL 204 (356)
T ss_pred ecccccccCHHHHHHhhhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCE
Confidence 775 578999998887 599999999999999999988888887754 88999999998766532222 2235
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 009167 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN-AAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~-~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p 428 (541)
+++.||||.||-.| ++.|+.++++++++.+++.+..+....... .+..+++.-+.+....++..+.++++.+.|++++
T Consensus 205 ivlRTfSKa~gLAG-lRlGy~ia~~~~i~~l~~vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~ 283 (356)
T COG0079 205 IVLRTFSKAFGLAG-LRVGYAIANPELIAALNKVRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG 283 (356)
T ss_pred EEEEecHHhhhcch-hceeeccCCHHHHHHHHHhcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 89999999998766 568999999999999999887665432222 2222223335566677777788999999999876
Q ss_pred CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHH
Q 009167 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
+..+ +|. .++++.+.++. .. ...+.+.|...|+.+..-+.
T Consensus 284 -~~~v-~pS----------------~aNFvlv~~~~-~~-~~~l~~~L~~~giivR~~~~-------------------- 323 (356)
T COG0079 284 -LFGV-FPS----------------QANFVLVRVPD-AE-AAALAEALLKKGILVRDCSS-------------------- 323 (356)
T ss_pred -CCee-cCC----------------CCcEEEEECCC-cc-HHHHHHHHHHCCEEEEeCCC--------------------
Confidence 4333 343 46889998874 23 55667777666665543210
Q ss_pred HhcCCCCCeEEEEecCCC-HHHHHHHHHHHHh
Q 009167 509 LKYGIMDNLVRFSFGVED-FEDLKADVLQALH 539 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~e~-~edli~dL~~AL~ 539 (541)
.+..++++||++|.++ .+.+++.|.+.+.
T Consensus 324 --~~~~~~~lRitvgt~een~~ll~AL~~~~~ 353 (356)
T COG0079 324 --VGLLPGYLRITVGTPEENDRLLAALREVLK 353 (356)
T ss_pred --CCCCCCeEEEEeCCHHHHHHHHHHHHHHHh
Confidence 1234679999999743 3556666665554
No 56
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=1.9e-24 Score=229.15 Aligned_cols=276 Identities=18% Similarity=0.201 Sum_probs=193.8
Q ss_pred CchhHHHHHHHHHHHh----CC----Cc-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEE
Q 009167 208 GNPTTVVVEEKMSALE----GA----ES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~----g~----e~-~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~ 278 (541)
+.....+||++||+.+ |. ++ +++++++++|+..++.+++.|||+|++++|.|...... ....|.++.
T Consensus 63 ~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~----~~~~gg~~v 138 (393)
T COG0436 63 PSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAA----VKLAGGKPV 138 (393)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHH----HHhcCCEEE
Confidence 5556678888888765 31 24 55555556999999999999999999999999986543 334566666
Q ss_pred EeCC--------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc-----
Q 009167 279 VIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----- 342 (541)
Q Consensus 279 ~vd~--------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~----- 342 (541)
.++. .|+++|++++++ +||+|++++||||||.+++ +++|+++|++||++||.||+|.......
T Consensus 139 ~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s 217 (393)
T COG0436 139 PVPLDEEENGFKPDLEDLEAAITP-KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPS 217 (393)
T ss_pred EEeCCcCccCCcCCHHHHHhhcCc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCC
Confidence 6652 169999999998 6999999999999999998 6789999999999999999987543321
Q ss_pred cccc----CCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCCchHHHHHHHHHhHH------HHHHHHH
Q 009167 343 ALSL----GADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQ 411 (541)
Q Consensus 343 ~~~~----gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~------tl~~r~~ 411 (541)
.+.. ..-|+++|+||.++-.| .+.||++++ +++++.+.+.+.....+.+...+.++..+|+ .+....+
T Consensus 218 ~~~~~~~~~~~i~i~s~SK~~~mtG-wRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~ 296 (393)
T COG0436 218 ILELAGARDRTITINSFSKTYGMTG-WRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMRE 296 (393)
T ss_pred HhhcCCCcceEEEEecccccccccc-cceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHH
Confidence 1211 23588999999999666 458999988 7888888766665554444444444444443 2233334
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCccc
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCES 490 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~s 490 (541)
...++++.+.+.|.+.+.+..+..|. ++..++..++.. .....|...| +..++++..|..|.
T Consensus 297 ~~~~rrd~l~~~l~~~~g~~~~~~p~----------------Ga~Y~~~~i~~~-~d~~~f~~~Ll~~~gV~v~PG~~Fg 359 (393)
T COG0436 297 EYRERRDLLVEALNEIGGLSVVKPPE----------------GAFYLFPKIPEL-LDSEEFAKKLLEEAGVAVVPGSGFG 359 (393)
T ss_pred HHHHHHHHHHHHHHhcCCeeeccCCC----------------eeEEEEeecCCC-CCHHHHHHHHHHhCCEEEecccccC
Confidence 56678888889999887665444342 344567777642 1223333332 34578888886643
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC
Q 009167 491 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED 526 (541)
Q Consensus 491 l~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~ 526 (541)
. ...+++||||++..+
T Consensus 360 ~--------------------~~g~~~vRis~~~~~ 375 (393)
T COG0436 360 E--------------------PPGEGYVRLSLATSE 375 (393)
T ss_pred C--------------------CCCCCeEEEEEecCH
Confidence 2 014689999999765
No 57
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=8.7e-25 Score=229.97 Aligned_cols=294 Identities=20% Similarity=0.243 Sum_probs=207.6
Q ss_pred chhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhcc---CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e---~~i~~sSGs~Ai~~al~all~---pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.....++++.+++++|.+ +.++++++++++.+++.++.. +||+|++++++|++.+..+....+..|+++++++.
T Consensus 42 ~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 121 (373)
T cd06453 42 TDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPV 121 (373)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeec
Confidence 345678899999999976 456667777999999999887 89999999999998765555555667888888864
Q ss_pred C-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcEEEECCc
Q 009167 283 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (541)
Q Consensus 283 ~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDivv~S~s 356 (541)
+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|++||+|++++.+.. .+....++|+++.|++
T Consensus 122 ~~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 200 (373)
T cd06453 122 DDDGQLDLEALEKLLTE-RTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGH 200 (373)
T ss_pred CCCCCcCHHHHHHHhcC-CceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccc
Confidence 3 79999999987 599999999999999999999999999999999999999875533 3334568999999999
Q ss_pred cccCCCCCceEEEEEeChHHHHHHHHHhhh--------------------c-CCCchHHHHHHHHHhHHH-----HHHHH
Q 009167 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------------------L-GGALNPNAAYLIIRGMKT-----LHLRV 410 (541)
Q Consensus 357 K~lgg~gd~~gG~lv~~~~li~~l~~~~~~--------------------~-G~~~s~~~a~l~l~~l~t-----l~~r~ 410 (541)
|++++.+ +|+++.++++++.++..... + .++++......+..+++. +..+.
T Consensus 201 K~~~~~g---~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~ 277 (373)
T cd06453 201 KMLGPTG---IGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIA 277 (373)
T ss_pred cccCCCC---cEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHH
Confidence 9999854 68998888887766543210 0 112222222222222322 23334
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCccc
Q 009167 411 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCES 490 (541)
Q Consensus 411 ~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~s 490 (541)
++..+.++++.+.|++++.++.+ .+. ...+++++|.+++ ....++.+.|+..++.++.|..+.
T Consensus 278 ~~~~~~~~~l~~~l~~~~~~~~~-~~~--------------~~~~~~~~~~~~~--~~~~~i~~~l~~~gi~i~~g~~~~ 340 (373)
T cd06453 278 AHEHELTAYALERLSEIPGVRVY-GDA--------------EDRAGVVSFNLEG--IHPHDVATILDQYGIAVRAGHHCA 340 (373)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEe-CCc--------------cccCCeEEEEECC--cCHHHHHHHHHHCCEEeccCccch
Confidence 55556677777888777765433 111 0135688998864 234566777766677777664322
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 491 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 491 l~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
. + ....+|. ++.||+|++..++++.++.|.++|
T Consensus 341 ~---~-----------~~~~~~~-~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 341 Q---P-----------LMRRLGV-PGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred h---H-----------HHHHhCC-CCeEEEEecCCCCHHHHHHHHhhC
Confidence 1 0 0112332 478999999988888888877664
No 58
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=1.1e-24 Score=231.85 Aligned_cols=299 Identities=20% Similarity=0.234 Sum_probs=208.3
Q ss_pred CchhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 208 GNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e---~~i~~sSGs~Ai~~al~al----l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.....+++++.||+++|.+ ++++++++++++.+++.++ +++||+|++++++|++....+....+..|++++.+
T Consensus 60 ~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v 139 (403)
T TIGR01979 60 ATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFI 139 (403)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEE
Confidence 3446778999999999975 3555555668998888764 68899999999999987666656666778888887
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEEC
Q 009167 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (541)
Q Consensus 281 d~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S 354 (541)
+. .|++++++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+. +.+....++|+++.|
T Consensus 140 ~~~~~~~~~~~~l~~~i~~-~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s 218 (403)
T TIGR01979 140 PLDDDGTLDLDDLEKLLTE-KTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFS 218 (403)
T ss_pred ecCCCCCCCHHHHHHHhcc-CCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEe
Confidence 64 378999999987 49999999999999999999999999999999999999987653 244455689999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhh---------------------hcCCCchHHHHHHHHHhHHHH-----HH
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HL 408 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~s~~~a~l~l~~l~tl-----~~ 408 (541)
+||++|+.| .|+++.++++++.+..... ...++.+....+.+..+++.+ ..
T Consensus 219 ~~K~~gp~G---~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~ 295 (403)
T TIGR01979 219 GHKMYGPTG---IGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLEN 295 (403)
T ss_pred cccccCCCC---ceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHH
Confidence 999988665 6888888887766532110 001122222222222333322 22
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCc
Q 009167 409 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 409 r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
..++..+.++.+.+.|++.+.++ +..|.- + ...++++.|.+++. ....+.+.|+..++.++.|..
T Consensus 296 ~~~~~~~l~~~l~~~l~~~~g~~-~~~~~~---~---------~~~~~~v~~~~~~~--~~~~~~~~L~~~gI~v~~g~~ 360 (403)
T TIGR01979 296 IEAHEHELTAYALERLGEIPGLR-IYGPRD---A---------EDRGGIISFNVEGV--HPHDVGTILDEEGIAVRSGHH 360 (403)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EeCCCC---c---------cccCceEEEEeCCc--CHHHHHHHHhhCCEEEcchhh
Confidence 33445556677777777776653 333321 0 01367899998742 244566777777888887754
Q ss_pred ccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 489 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
++. | ....+|. ++.||||++..++++.++.|.++|++
T Consensus 361 ~~~---~-----------~~~~~~~-~~~iRiS~~~~~t~~di~~l~~~l~~ 397 (403)
T TIGR01979 361 CAQ---P-----------LMRRFGV-PATCRASFYIYNTEEDIDALVEALKK 397 (403)
T ss_pred hhH---H-----------HHHHhCC-CCEEEEEeccCCCHHHHHHHHHHHHH
Confidence 321 1 1112332 47899999988777777777777654
No 59
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.8e-24 Score=230.69 Aligned_cols=282 Identities=16% Similarity=0.199 Sum_probs=188.5
Q ss_pred HHHHHHHHHHhCC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-----
Q 009167 213 VVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (541)
Q Consensus 213 ~~Le~~LA~l~g~-----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----- 282 (541)
+.+.+.+++++|. +++++++++++++.+++.+++++||+|+++.|+|+.... .++..|.++..++.
T Consensus 85 ~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~----~~~~~g~~v~~v~~~~~~~ 160 (405)
T PRK06207 85 ELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRK----LVEFFEGEMVPVQLDYLSA 160 (405)
T ss_pred HHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHH----HHHHcCCEEEEEeccccCc
Confidence 3344444444473 234444445599999999999999999999999988553 34445666655542
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----c-cc----c
Q 009167 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K-AL----S 345 (541)
Q Consensus 283 -----~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----~-~~----~ 345 (541)
.|+++|++++++ ++++|++++|+||||.+++ +++|+++|+++|++||+||+|...... . .. .
T Consensus 161 ~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~ 239 (405)
T PRK06207 161 DKRAGLDLDQLEEAFKA-GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPID 239 (405)
T ss_pred ccCCCcCHHHHHHhhhh-cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCC
Confidence 278999998877 4999999999999999998 667888899999999999998764321 1 11 1
Q ss_pred cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHHHHHH
Q 009167 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMA 421 (541)
Q Consensus 346 ~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a~~la 421 (541)
....+++.|+||.++-+| ++.||+++++++++++...........+......+...++ .+..++++..+++..+.
T Consensus 240 ~~~vi~i~SfSK~~~lpG-lRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~ 318 (405)
T PRK06207 240 PENVITIMGPSKTESLSG-YRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLL 318 (405)
T ss_pred cCcEEEEecchhhccCcc-cceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 123489999999998554 4689999999999988876655444444333333333332 24555666666777788
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCcccccccCccccc
Q 009167 422 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSY 500 (541)
Q Consensus 422 ~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~~~ 500 (541)
+.|++++.+. +..|. .|.++|++++........|.+.|. ..++.+..|..+..
T Consensus 319 ~~L~~~~~~~-~~~p~----------------gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~--------- 372 (405)
T PRK06207 319 RVLRGVEGVF-VRAPQ----------------AGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSP--------- 372 (405)
T ss_pred HHHhcCCCce-ecCCC----------------eeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCC---------
Confidence 8887654432 22221 467889998742123456666664 46888877754321
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecCCCHHHH---HHHHHHHHh
Q 009167 501 WDLSQSERLKYGIMDNLVRFSFGVEDFEDL---KADVLQALH 539 (541)
Q Consensus 501 ~~~~~~~~~~~gi~~~~IRlSvG~e~~edl---i~dL~~AL~ 539 (541)
..++++|||++. +.+++ ++.|.++|+
T Consensus 373 ------------~~~~~~Ris~~~-~~~~l~~al~rl~~~l~ 401 (405)
T PRK06207 373 ------------HTADSIRLNFSQ-DHAAAVAAAERIAQLIE 401 (405)
T ss_pred ------------CCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 125789999997 33333 444444443
No 60
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.94 E-value=1.6e-24 Score=230.22 Aligned_cols=299 Identities=14% Similarity=0.122 Sum_probs=204.4
Q ss_pred cCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~ 283 (541)
|+|.. ++.+||+++|+++|.+++++++||+.|+..++.+++++||+|+++++.|+++...+ .+. +.++.+++..
T Consensus 39 yg~~~--~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~~--~l~--~~~~~~~~~~ 112 (392)
T PLN03227 39 YGTID--AHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAKRGDLLVVDRGVNEALLVGV--SLS--RANVRWFRHN 112 (392)
T ss_pred cCChH--HHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCCCCCEEEEeccccHHHHHHH--HHc--CCeEEEeCCC
Confidence 77655 78999999999999999999999999988999999999999999999999876543 122 3466667776
Q ss_pred CHHHHHH---hccC----------CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc---------
Q 009167 284 DMEGLEA---ALNN----------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--------- 341 (541)
Q Consensus 284 d~e~Le~---al~~----------~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~--------- 341 (541)
|++++++ .+++ .++++|++|+|.|++|.+.|+++|.++|++||+++|+||+++.+...
T Consensus 113 d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~ 192 (392)
T PLN03227 113 DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEH 192 (392)
T ss_pred CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHH
Confidence 6665554 3321 24899999999999999999999999999999999999998744321
Q ss_pred ---cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH--hhhcCCCchHHHHHHHHHhHHHH---HHHHHHH
Q 009167 342 ---KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLGGALNPNAAYLIIRGMKTL---HLRVQQQ 413 (541)
Q Consensus 342 ---~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~--~~~~G~~~s~~~a~l~l~~l~tl---~~r~~~~ 413 (541)
.| ..++|+++.|++|++++ ++|++++++++++.++.. ...+++.++|..++.++..++.+ +.++++.
T Consensus 193 ~g~~p-~~~~Div~~slsk~~g~----~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l 267 (392)
T PLN03227 193 AGLKP-MVHAEIVTFSLENAFGS----VGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRL 267 (392)
T ss_pred cCCCC-CCCceEEEeechhhhhc----cCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 12 23679999999999874 368888998888766542 23466666676666555444332 3556667
Q ss_pred HHHHHHHHHHHHh--CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHH--------HHHHHHHHccCcCeec
Q 009167 414 NSTALRMAKILEA--HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT--------ATIKFIDALKIPYIAP 483 (541)
Q Consensus 414 ~~~a~~la~~L~~--~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~--------~~~~~l~~L~~~~iav 483 (541)
.++.+++.+.|++ +|.+..+.- ++.- .....|.|+.+++.+... ....+.+.+...|+.+
T Consensus 268 ~~~~~~l~~~L~~~~~~~~~~~rg-~~~~---------~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 337 (392)
T PLN03227 268 HDSIANLYSTLTNSSHPYALKLRN-RLVI---------TSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAV 337 (392)
T ss_pred HHHHHHHHHHHHhcCCcccccccc-cccc---------CCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEE
Confidence 7788888888864 232222221 1100 001247799999954221 1236666665555544
Q ss_pred ccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 484 SFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 484 S~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
..-+.......| -+++..||+++...++++.++.+.++|+
T Consensus 338 ~~~~~~~~~~~~----------------~~P~~~iR~~~~~~~t~eei~~~~~~l~ 377 (392)
T PLN03227 338 VSTGGHVKKFLQ----------------LVPPPCLRVVANASHTREDIDKLLTVLG 377 (392)
T ss_pred EecccccCCcCC----------------CCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 321111110011 1235679999998777666666655554
No 61
>PRK07324 transaminase; Validated
Probab=99.94 E-value=2.5e-24 Score=227.21 Aligned_cols=281 Identities=16% Similarity=0.193 Sum_probs=191.4
Q ss_pred CccCCCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEE
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~ 278 (541)
+.|+. .....+||+.||++++. +++++++++++|+.+++.+++.+||+|+++.|+|.... ..++..|.+++
T Consensus 56 ~~Y~~--~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~g~~v~ 129 (373)
T PRK07324 56 LTYGW--IEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLY----DIPESLGAEVD 129 (373)
T ss_pred ccCCC--CCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCEEE
Confidence 45553 22456899999998753 34555556669999999999999999999999998754 33455677777
Q ss_pred EeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc----cc
Q 009167 279 VIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL 344 (541)
Q Consensus 279 ~vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~----~~ 344 (541)
.++. .|++++++++++ ++|+|++++|+||||.+++ +++|+++|+++|+++|+|++|....... ..
T Consensus 130 ~v~~~~~~~~~~d~~~l~~~~~~-~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~ 208 (373)
T PRK07324 130 YWQLKEENGWLPDLDELRRLVRP-NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIA 208 (373)
T ss_pred EEecccccCCCCCHHHHHHhCCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChh
Confidence 7753 278999988877 5999999999999999999 8889999999999999999986532211 11
Q ss_pred c-cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHH-HHHHHHHHH
Q 009167 345 S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRV-QQQNSTALR 419 (541)
Q Consensus 345 ~-~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~-~~~~~~a~~ 419 (541)
. ....+++.|+||.+|.+| .+.|++++++++++.++..........+....+++...++. +..++ +...+++..
T Consensus 209 ~~~~~~I~~~s~SK~~~~~G-~RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~ 287 (373)
T PRK07324 209 DLYEKGISTNSMSKTYSLPG-IRVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAI 287 (373)
T ss_pred hccCCEEEEecchhhcCCcc-ceeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 1 123588999999998665 45799999999999888776543333444444444444432 22222 333456667
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCcccccccCccc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~ 498 (541)
+.++|++++.+. +..|. .|..+++.++.+ ....+|.+.| +..++.+..|..+.
T Consensus 288 l~~~l~~~~~~~-~~~p~----------------gg~~~~i~~~~~-~~~~~~~~~ll~~~gv~v~pg~~F~-------- 341 (373)
T PRK07324 288 LDEWVAKEPRVS-YVKPK----------------AVSTSFVKLDVD-MPSEDFCLKLLKETGVLLVPGNRFD-------- 341 (373)
T ss_pred HHHHHhcCCCce-EECCC----------------ceEEEEEEeCCC-CCHHHHHHHHHHhcCEEEECccccC--------
Confidence 778887766543 22332 344556666532 2345566664 45577777775431
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHH
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKA 532 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~ 532 (541)
.++++|||++.. .+.+.+
T Consensus 342 ---------------~~~~iRis~~~~-~~~l~~ 359 (373)
T PRK07324 342 ---------------LEGHVRIGYCCD-TETLKK 359 (373)
T ss_pred ---------------CCCeEEEEecCC-HHHHHH
Confidence 146899999963 444433
No 62
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=2.4e-24 Score=227.05 Aligned_cols=282 Identities=15% Similarity=0.168 Sum_probs=196.9
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-----
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~----- 283 (541)
++...++++.+|+++|.+.++++++|++++..++.+++++||+|+++.+.|.+.+. .++..|+++..++.+
T Consensus 50 ~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~----~~~~~g~~~~~~~~~~~~~~ 125 (370)
T TIGR02539 50 KPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYV----AAERAGLNVKEVPHTGHPEY 125 (370)
T ss_pred chHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHH----HHHHcCCEEEEEecCCcccC
Confidence 45778899999999999999999999999999999999999999999999877653 345568888887754
Q ss_pred --CHHHHHHhccC------CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEEC
Q 009167 284 --DMEGLEAALNN------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (541)
Q Consensus 284 --d~e~Le~al~~------~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S 354 (541)
|+++|++++++ .++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. .......++|+++.|
T Consensus 126 ~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s 205 (370)
T TIGR02539 126 KVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGS 205 (370)
T ss_pred CcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEee
Confidence 89999998853 148899999999999999999999999999999999999998753 334445678999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhhhc--------CCCchHHHHHHHHHhHHHHHHH---HHHHHHHHHHHHHH
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL--------GGALNPNAAYLIIRGMKTLHLR---VQQQNSTALRMAKI 423 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~--------G~~~s~~~a~l~l~~l~tl~~r---~~~~~~~a~~la~~ 423 (541)
+||++++++ ..|++++++++++.++.....+ +.+.....+..+...++....+ ..+..++++++.+.
T Consensus 206 ~sK~~~~~g--~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~ 283 (370)
T TIGR02539 206 GHKSMAASG--PCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAE 283 (370)
T ss_pred CcccccCCC--CEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998655 3689999999998887654322 1111111222222233332222 33444556778888
Q ss_pred HHhCCCceEE-eCCCCCCCchhhhHhhhccCcccEEEEEEcCC-------HHHHHHHHHHccCcCee-cccCCccccccc
Q 009167 424 LEAHPKVKRV-HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALKIPYIA-PSFGGCESIVDQ 494 (541)
Q Consensus 424 L~~~p~v~~v-~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-------~~~~~~~l~~L~~~~ia-vS~G~~~sl~~~ 494 (541)
|++.+ +..+ .+|. ..+++.+.++.- ......+.+.|...|+. +..
T Consensus 284 L~~~g-~~~~~~~~s----------------~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~--------- 337 (370)
T TIGR02539 284 LEDIG-FIQLGQKPK----------------EHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRS--------- 337 (370)
T ss_pred HHhCC-cEEEccCCC----------------cCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccC---------
Confidence 88753 2211 1121 356787876531 11234567777655542 111
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEe--c-CCCHHHHHHHHHHHHhh
Q 009167 495 PAIMSYWDLSQSERLKYGIMDNLVRFSF--G-VEDFEDLKADVLQALHA 540 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSv--G-~e~~edli~dL~~AL~~ 540 (541)
+ .++++|+|+ + .++.+.+++.|++.+++
T Consensus 338 -----------------~-~~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 338 -----------------G-QTKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred -----------------C-cceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 1 145899997 3 23455566666655543
No 63
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3.9e-24 Score=223.80 Aligned_cols=282 Identities=15% Similarity=0.207 Sum_probs=194.7
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
+.+|+++...+||+++|++++.+ +.|++++|+ +++..++.+++++||+|++++|+|.... ..++..|.++..++
T Consensus 53 ~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~ 128 (351)
T PRK14807 53 VNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYS----VYSKIAGAVEIPVK 128 (351)
T ss_pred ccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEee
Confidence 45677777889999999999873 556666665 8899999999999999999999998643 23445677776665
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccc---c-ccCCcEEE
Q 009167 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---L-SLGADLVL 352 (541)
Q Consensus 282 ~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~---~-~~gaDivv 352 (541)
. .|++++++++++.++|+|++++|+||||.+++.+++.+++++++.++|+||+|........ . .....+++
T Consensus 129 ~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~ 208 (351)
T PRK14807 129 LKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVL 208 (351)
T ss_pred cCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEE
Confidence 3 3689999998754599999999999999999999999999998889999999865432111 1 12346899
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH--HHHHHHHHHHHHHHHHHHHHHhCCCc
Q 009167 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK--TLHLRVQQQNSTALRMAKILEAHPKV 430 (541)
Q Consensus 353 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~--tl~~r~~~~~~~a~~la~~L~~~p~v 430 (541)
.|+||.++.+| +..||+++++++++.++.....+ .++.....++...++ .+..+++...+++..+.+.|++.+++
T Consensus 209 ~S~SK~~~~~G-lRiG~~v~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~ 285 (351)
T PRK14807 209 RTLSKAFGLAG-LRVGYAVANENILKYLNLVKSPY--NINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGI 285 (351)
T ss_pred ecchHhcccch-hceeeeecCHHHHHHHHHccCCC--CcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999997554 46899999999998887654322 234444444444443 23444455556677777888765554
Q ss_pred eEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHh
Q 009167 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 510 (541)
Q Consensus 431 ~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~ 510 (541)
. + +|. .|+++++.++. ...+.+.|...++.+..++..
T Consensus 286 ~-~-~~~----------------~~~~~~i~~~~----~~~~~~~l~~~gV~v~~~~~~--------------------- 322 (351)
T PRK14807 286 K-V-YPS----------------KTNFILVKFKD----ADYVYQGLLERGILVRDFSKV--------------------- 322 (351)
T ss_pred E-E-CcC----------------CccEEEEEcCC----HHHHHHHHHHCCEEEEECCCC---------------------
Confidence 2 2 231 36678888863 234555555556665432110
Q ss_pred cCCCCCeEEEEecCCC-HHHHHHHHHH
Q 009167 511 YGIMDNLVRFSFGVED-FEDLKADVLQ 536 (541)
Q Consensus 511 ~gi~~~~IRlSvG~e~-~edli~dL~~ 536 (541)
.+ .++++||+++..+ .+.+++.|++
T Consensus 323 ~~-~~~~iRis~~~~~~~~~l~~~l~~ 348 (351)
T PRK14807 323 EG-LEGALRITVSSCEANDYLINGLKE 348 (351)
T ss_pred CC-CCCeEEEEcCCHHHHHHHHHHHHH
Confidence 01 2468999999643 3445555544
No 64
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.4e-24 Score=227.96 Aligned_cols=282 Identities=14% Similarity=0.170 Sum_probs=195.9
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+++...+||++||+++|.+ +.|++++|+ +++..++.+++++||+|++++|+|+... ..++..|+++..++.
T Consensus 81 ~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~----~~~~~~g~~~~~v~~ 156 (380)
T PLN03026 81 YVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYV----FDAAVNGAEVIKVPR 156 (380)
T ss_pred ccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEeec
Confidence 4577778889999999999874 456666665 8999999999999999999999997533 334456888777753
Q ss_pred -----CCHHHHHHhc-cCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc----ccc-ccCCcEE
Q 009167 283 -----ADMEGLEAAL-NNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-SLGADLV 351 (541)
Q Consensus 283 -----~d~e~Le~al-~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~----~~~-~~gaDiv 351 (541)
.|+++|++++ ++ ++++|++++|+||||.+++.+++.++++.. ++||+||+|...... ... .....++
T Consensus 157 ~~~~~~d~~~l~~~~~~~-~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv 234 (380)
T PLN03026 157 TPDFSLDVPRIVEAVETH-KPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIV 234 (380)
T ss_pred CCCCCcCHHHHHHHHhcc-CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEE
Confidence 2689999888 44 599999999999999999999999999865 999999998653321 111 2345689
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCC
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p 428 (541)
+.|+||.+|..| ++.|++++++++++.++.....++ ++.....++...++ .+....+...++++.+.+.|++++
T Consensus 235 ~~SfSK~~glaG-lRiGy~~~~~~~i~~l~~~~~~~~--~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 311 (380)
T PLN03026 235 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVP 311 (380)
T ss_pred EecchHhhcCcc-ccceeeecCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999998555 568999999999998877654333 34343344444442 233334444566777778888765
Q ss_pred CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHH
Q 009167 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
.+. + +|. .|+++++.++.+ ....+|.+.|...++.+..+..
T Consensus 312 ~~~-~-~p~----------------~~~f~~~~~~~~-~~~~~~~~~l~~~gI~v~~~~~-------------------- 352 (380)
T PLN03026 312 FLE-P-YPS----------------DANFILCRVTSG-RDAKKLKEDLAKMGVMVRHYNS-------------------- 352 (380)
T ss_pred CCe-E-CCC----------------CCeEEEEECCCC-CCHHHHHHHHHHCCeEEEECCC--------------------
Confidence 432 2 332 477889988632 1234566666556776654421
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 509 LKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.+ .++++|||+|.. +..+.|.++|++
T Consensus 353 --~~-~~~~lRis~~~~---~~~~~l~~al~~ 378 (380)
T PLN03026 353 --KE-LKGYIRVSVGKP---EHTDALMEALKQ 378 (380)
T ss_pred --CC-CCCEEEEecCCH---HHHHHHHHHHHH
Confidence 01 246899999953 233445555543
No 65
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.7e-24 Score=227.83 Aligned_cols=269 Identities=13% Similarity=0.101 Sum_probs=186.4
Q ss_pred hhHHHHHHHHHHHhC------C-C-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 210 PTTVVVEEKMSALEG------A-E-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 210 p~~~~Le~~LA~l~g------~-e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
....+|++.||++++ . . +.|++++|+ +++.+++.+++++||+|+++.|+|+.... .+...|+++..+
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v 144 (399)
T PRK07681 69 SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYET----GIQMAGATSYYM 144 (399)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHH----HHHhcCCEEEEE
Confidence 456678888888764 1 2 456666665 89999999999999999999999988553 344568877776
Q ss_pred CCC-------CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-----ccc-
Q 009167 281 DPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL- 344 (541)
Q Consensus 281 d~~-------d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-----~~~- 344 (541)
+.+ |++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|++||+||+|...... ...
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~ 223 (399)
T PRK07681 145 PLKKENDFLPDLELIPEEIAD-KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLS 223 (399)
T ss_pred ecCCCCCCcCCHHHHHHhccc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhh
Confidence 532 68889888876 4999999999999999999 668888999999999999998753321 111
Q ss_pred ---ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHH
Q 009167 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (541)
Q Consensus 345 ---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a 417 (541)
.....|++.|+||.++.+| +..||+++++++++.+...........+......+...++ .+....+...++.
T Consensus 224 ~~~~~~~~i~~~S~SK~~~~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 302 (399)
T PRK07681 224 VPGAKEVGVEINSLSKSYSLAG-SRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERR 302 (399)
T ss_pred CCCCcccEEEEeecccccCCcc-ceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 1124588999999998665 5689999999999988876654444444444444444443 2333334445666
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccC-cCeecccCCcccccccCc
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~-~~iavS~G~~~sl~~~pa 496 (541)
..+.+.|+++ .+ .+..|. .|.++|+.++.+ ....+|.+.+.. .++.+..|..+..
T Consensus 303 ~~l~~~L~~~-g~-~~~~p~----------------~g~f~~~~l~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~----- 358 (399)
T PRK07681 303 DTLVDGFRTF-GW-NVDKPA----------------GSMFVWAEIPKG-WTSLSFAYALMDRANVVVTPGHAFGP----- 358 (399)
T ss_pred HHHHHHHHHC-CC-cccCCC----------------eeeEEEEECCCC-CCHHHHHHHHHHhCCEEEeCChhhCc-----
Confidence 7777888775 33 222221 467889998743 223455555533 6777777654310
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecC
Q 009167 497 IMSYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
..++++|||++.
T Consensus 359 ----------------~~~~~iRis~~~ 370 (399)
T PRK07681 359 ----------------HGEGFVRIALVQ 370 (399)
T ss_pred ----------------CCCCeEEEEecC
Confidence 024789999994
No 66
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=2.9e-24 Score=227.78 Aligned_cols=225 Identities=13% Similarity=0.184 Sum_probs=175.8
Q ss_pred CCccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.|.+++...|..+++|+.+|+++|.++++++++|++++..++.+++++||+|+++.++|.+.+.. ++..|+++.++
T Consensus 54 ~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~----~~~~G~~~~~v 129 (387)
T PRK09331 54 PGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVA----AERAGLNVREV 129 (387)
T ss_pred ccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH----HHHcCCEEEEE
Confidence 55667777889999999999999999889988899999999999999999999999999887643 34568888887
Q ss_pred CC-------CCHHHHHHhccCC------CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-ccccccc
Q 009167 281 DP-------ADMEGLEAALNNN------NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSL 346 (541)
Q Consensus 281 d~-------~d~e~Le~al~~~------~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~ 346 (541)
+. .|++++++++++. ++++|++++|+|++|.+.|+++|.++|+++|+++|+|++++.+. +.+...+
T Consensus 130 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~ 209 (387)
T PRK09331 130 PKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKL 209 (387)
T ss_pred eCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHc
Confidence 65 3789999988631 48999999999999999999999999999999999999998753 4555667
Q ss_pred CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--------hcCCCchHHHHHHHHHhHHH---HHHHHHHHHH
Q 009167 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGGALNPNAAYLIIRGMKT---LHLRVQQQNS 415 (541)
Q Consensus 347 gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--------~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~ 415 (541)
|+|+++.|+||++++++ .+|++++++++++.++.... .+|..+.+...+.++.+++. ...++++..+
T Consensus 210 g~D~~~~s~~K~l~~~~--~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~ 287 (387)
T PRK09331 210 GADFIVGSGHKSMAASA--PSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVK 287 (387)
T ss_pred CCCEEEeeCcccccCCC--CEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999998654 37899999988887654322 13333332222222233332 2334556667
Q ss_pred HHHHHHHHHHhCCCce
Q 009167 416 TALRMAKILEAHPKVK 431 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~ 431 (541)
+++++.+.|++.++++
T Consensus 288 ~~~~l~~~L~~l~g~~ 303 (387)
T PRK09331 288 KARWFVDELEKIEGFK 303 (387)
T ss_pred HHHHHHHHHhcCCCEE
Confidence 8888889998886654
No 67
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=2.3e-24 Score=227.85 Aligned_cols=314 Identities=17% Similarity=0.177 Sum_probs=204.0
Q ss_pred ccCCCccCCCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhc-----cC-CCEEEEcCCCCcchHHHHHh
Q 009167 198 RRASFEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV-----PA-GGHIVTTTDCYRKTRIFIET 268 (541)
Q Consensus 198 ~~~~~~Y~R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~all-----~p-Gd~Vlv~~~~y~~~~~~~~~ 268 (541)
..+.+.|++...+..++.++++++..++ +++++++++++++++++.++. ++ ||+|+++..+|++....+.
T Consensus 30 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~- 108 (382)
T TIGR03403 30 PNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCA- 108 (382)
T ss_pred CccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHH-
Confidence 3334445543344444444555555554 345555566699999988762 45 4789999999988766553
Q ss_pred hcccCCeEEEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-Cccc
Q 009167 269 VLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQK 342 (541)
Q Consensus 269 ~l~~~Gi~v~~vd~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~ 342 (541)
.++..|++++.++.+ |+++|++++++ ++++|++++|+||||.++|+++|.++|+++|+++++|++++.+ .+.+
T Consensus 109 ~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~-~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~ 187 (382)
T TIGR03403 109 FLESLGVEVTYLPINEQGTITAEQVREAITE-KTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVD 187 (382)
T ss_pred HHHHCCCEEEEEecCCCCCCCHHHHHHhccc-CCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccC
Confidence 456678998888643 78999999987 4899999999999999999999999999999999999998765 4456
Q ss_pred ccccCCcEEEECCccccCCCCCceEEEEEeChHHH--HHHHH---HhhhcCCCchHHHHHHHHHhHHH----HHHHHHHH
Q 009167 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV--TQIRN---LHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQ 413 (541)
Q Consensus 343 ~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li--~~l~~---~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~ 413 (541)
..++++|+++.|+||++|++| .|+++.++++. ..+.. ......++++....+.+..+++. ++...++.
T Consensus 188 ~~~~~~D~~~~s~~K~~gp~G---~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~ 264 (382)
T TIGR03403 188 VQKAGVDFLSFSAHKFHGPKG---VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHV 264 (382)
T ss_pred ccccCCCEEEEcchhhCCCCc---eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 667789999999999988777 46665544321 11100 00001123333333222333332 23333444
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccc
Q 009167 414 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVD 493 (541)
Q Consensus 414 ~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~ 493 (541)
.+.++++.+.|.+.+.+. +..|.- ...++++.|.+++. ....++..|...+|.++.|..++...
T Consensus 265 ~~l~~~l~~~L~~~~~~~-~~~~~~-------------~~~~~~~~~~~~~~--~~~~~~~~L~~~gI~v~~g~~c~~~~ 328 (382)
T TIGR03403 265 RRLRDRLEDALLELPDVF-VVGDRE-------------HRVPNTILISIKGV--EGEAMLWDLNKAGIAASTGSACASED 328 (382)
T ss_pred HHHHHHHHHHHhcCCCEE-EECCCC-------------CCcCCEEEEEeCCC--CHHHHHHhhccCCEEEEchhccCCCC
Confidence 556667777777777663 322210 01345778888752 24456666777899999887654211
Q ss_pred cCccccccCCCHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 494 QPAIMSYWDLSQSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 494 ~pa~~~~~~~~~~~~~~~gi~----~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
. -+...+..+|.. .+.||+|++..++++.++.+.++|++
T Consensus 329 ~--------~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~ 371 (382)
T TIGR03403 329 L--------EANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK 371 (382)
T ss_pred C--------CcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence 0 012334455543 47899999999888888888888764
No 68
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.93 E-value=6.2e-24 Score=223.04 Aligned_cols=222 Identities=14% Similarity=0.228 Sum_probs=168.6
Q ss_pred cCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~- 282 (541)
.+...+|...++++++|+++|.++++++++|++++.+++.+++++||+|+++.+.|.+.+. .+...|+++..++.
T Consensus 38 ~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~~ 113 (361)
T cd06452 38 LDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYV----AAERAGLNVREVPNT 113 (361)
T ss_pred cccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHH----HHHhcCCEEEEEecC
Confidence 4445678999999999999999777877778899999999999999999999999888653 34556888877753
Q ss_pred ------CCHHHHHHhccC------CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCc
Q 009167 283 ------ADMEGLEAALNN------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGAD 349 (541)
Q Consensus 283 ------~d~e~Le~al~~------~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaD 349 (541)
.|++++++++++ .++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. ......+++|
T Consensus 114 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d 193 (361)
T cd06452 114 GHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGAD 193 (361)
T ss_pred CCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCC
Confidence 378899888852 248999999999999999999999999999999999999988653 3455567899
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhh--------cCCCchHHHHHHHHHhHHHHHH---HHHHHHHHHH
Q 009167 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------LGGALNPNAAYLIIRGMKTLHL---RVQQQNSTAL 418 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--------~G~~~s~~~a~l~l~~l~tl~~---r~~~~~~~a~ 418 (541)
+++.|+||++++++ .+|+++++++++++++..... .+.+......+.++..++.+.. +..+..++++
T Consensus 194 ~~~~s~~K~l~~~~--~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 271 (361)
T cd06452 194 FIVGSGHKSMAASA--PIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKAR 271 (361)
T ss_pred EEEecCCccccCCC--CeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998655 478999999988887654321 2222222223333334433322 3334445667
Q ss_pred HHHHHHHhCCCce
Q 009167 419 RMAKILEAHPKVK 431 (541)
Q Consensus 419 ~la~~L~~~p~v~ 431 (541)
++.+.|++.++++
T Consensus 272 ~l~~~L~~l~g~~ 284 (361)
T cd06452 272 WFVAELEKIEGIK 284 (361)
T ss_pred HHHHHHhcCCCeE
Confidence 8889998887653
No 69
>PRK07179 hypothetical protein; Provisional
Probab=99.93 E-value=7e-24 Score=226.29 Aligned_cols=283 Identities=16% Similarity=0.169 Sum_probs=202.3
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~L 288 (541)
.+...+||++||+++|.+.+++++||++|+.+++.++..+||+|+++...|.+.... +...|+++..++..|+++|
T Consensus 98 ~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~~~l 173 (407)
T PRK07179 98 DSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEG----VRAAGAQAHPFRHNDVDHL 173 (407)
T ss_pred chHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHH----HHHCCCeEEEecCCCHHHH
Confidence 467889999999999999999999999999999999999999999999888876533 3345777777777899999
Q ss_pred HHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-------ccccc--cCCcEEEECCcccc
Q 009167 289 EAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------QKALS--LGADLVLHSATKFI 359 (541)
Q Consensus 289 e~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-------~~~~~--~gaDivv~S~sK~l 359 (541)
+++++++++++|++++|+||+|.++|+++|.++|+++|++||+|++++.+.. ..... .++|+++.|++|.+
T Consensus 174 ~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~ 253 (407)
T PRK07179 174 RRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAF 253 (407)
T ss_pred HHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhh
Confidence 9999753478999999999999999999999999999999999999864321 11111 24699999999999
Q ss_pred CCCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCCCceEEe
Q 009167 360 GGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVH 434 (541)
Q Consensus 360 gg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p~v~~v~ 434 (541)
++. +|++++++++++.++.... .++++..+.....+...++ ....+.++..++.+++.+.|++. ++. +
T Consensus 254 g~~----~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v- 326 (407)
T PRK07179 254 AGR----AGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL-GYN-I- 326 (407)
T ss_pred hcc----CeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC-C-
Confidence 864 6899999888777754332 3455544444333323333 33345566677788888888764 211 1
Q ss_pred CCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCC
Q 009167 435 YPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM 514 (541)
Q Consensus 435 ~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~ 514 (541)
.+.++++++.++. ......+.+.|...++.++ .++.|.. ...
T Consensus 327 -----------------~~~~~i~~l~~~~-~~~~~~~~~~L~~~GI~~~------~~~~p~~--------------~~~ 368 (407)
T PRK07179 327 -----------------RSESQIIALETGS-ERNTEVLRDALEERNVFGA------VFCAPAT--------------PKN 368 (407)
T ss_pred -----------------CCCCCEEEEEeCC-HHHHHHHHHHHHHCCceEe------eecCCCC--------------CCC
Confidence 1135788998753 2345566666665565322 1122221 012
Q ss_pred CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 515 DNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 515 ~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.+.||||++..++++.++.+.++|++
T Consensus 369 ~~~lRis~~~~~t~edi~~~~~~l~~ 394 (407)
T PRK07179 369 RNLIRLSLNADLTASDLDRVLEVCRE 394 (407)
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHH
Confidence 57899999987776666666666543
No 70
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.93 E-value=7.8e-24 Score=222.85 Aligned_cols=301 Identities=20% Similarity=0.239 Sum_probs=208.2
Q ss_pred hhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----
Q 009167 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e---~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
+..+++|+.|++++|.+ +++++++|++++.+++.+++++||+|+++.++|+++...+....+..|++++.++.
T Consensus 44 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 123 (376)
T TIGR01977 44 REVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEG 123 (376)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCC
Confidence 66889999999999974 34556677899999999999999999999999988776665556667888887764
Q ss_pred -CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCccccC
Q 009167 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIG 360 (541)
Q Consensus 283 -~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~sK~lg 360 (541)
.|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+. ..+....++|+++.|++|+++
T Consensus 124 ~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~ 202 (376)
T TIGR01977 124 LISPERIKRAIKT-NTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLL 202 (376)
T ss_pred CcCHHHHHHhcCC-CCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEeccccccc
Confidence 279999999977 49999999999999999999999999999999999999987653 334445789999999999987
Q ss_pred CCCCceEEEEEeChHHHHHHHHH----------------hhhcCCCchHHHHHHHHHhHHHH-----HHHHHHHHHHHHH
Q 009167 361 GHNDVLAGSISGSGKLVTQIRNL----------------HHVLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALR 419 (541)
Q Consensus 361 g~gd~~gG~lv~~~~li~~l~~~----------------~~~~G~~~s~~~a~l~l~~l~tl-----~~r~~~~~~~a~~ 419 (541)
++.+ .|++++.++..+..+... .+...++.+....+.+...++.+ +...++..+.+++
T Consensus 203 ~p~g-~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~ 281 (376)
T TIGR01977 203 GPQG-TGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEK 281 (376)
T ss_pred CCCC-ceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 6542 244555444322111100 00001122222222222333332 2233455567778
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCc-CeecccCCcccccccCccc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~-~iavS~G~~~sl~~~pa~~ 498 (541)
+.+.|++.+.+. +..|.- +. ..+++++|.+++. ....+.+.|... ++.++.|..++...++
T Consensus 282 ~~~~l~~~~~~~-~~~~~~---~~---------~~~~~v~~~~~~~--~~~~~~~~L~~~~gi~v~~g~~~~~~~~~--- 343 (376)
T TIGR01977 282 LLNGLREINKVK-IYGPAD---PA---------NRVGVVSFTVEGI--DSEEVADILDEKFDIATRTGLHCAPLAHK--- 343 (376)
T ss_pred HHHHHhcCCCeE-EeCCCC---cc---------ccCCeEEEEECCC--CHHHHHHHHhccCCEEEEcccccchHHHH---
Confidence 888888777653 322210 10 1356899998742 345666777654 8888877654432211
Q ss_pred cccCCCHHHHHhcC-CCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 499 SYWDLSQSERLKYG-IMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 499 ~~~~~~~~~~~~~g-i~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
.+| ...+.||+|++..++++.++.+.++|..+
T Consensus 344 -----------~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~~ 376 (376)
T TIGR01977 344 -----------TIGTFATGTIRLSLGYFNTEEEIEKLLEALSEI 376 (376)
T ss_pred -----------HhCCCCCCeEEEecCCCCCHHHHHHHHHHHhhC
Confidence 122 23578999999999999999999998764
No 71
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.93 E-value=1.1e-23 Score=223.36 Aligned_cols=285 Identities=18% Similarity=0.159 Sum_probs=197.1
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~L 288 (541)
.+...+||++||+++|.+++++++||++|+..++.+++++||+|+++++.|++....+ ..+. .+...+...|++++
T Consensus 82 ~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~-~~~~---~~~~~~~~~d~~~l 157 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGV-RLCK---AKRYRYANNDMADL 157 (393)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHH-HhcC---CceEEeCCCCHHHH
Confidence 5678899999999999999999999999999999999999999999999999876544 2233 22333456789999
Q ss_pred HHhccC---C--CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc-c------cc--ccCCcEEEEC
Q 009167 289 EAALNN---N--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K------AL--SLGADLVLHS 354 (541)
Q Consensus 289 e~al~~---~--~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~-~------~~--~~gaDivv~S 354 (541)
++++++ . ++++|++++++||||.+.|+++|+++|++||++||+|++|+.++.. . .. ..++|+++.|
T Consensus 158 ~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s 237 (393)
T TIGR01822 158 EAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGT 237 (393)
T ss_pred HHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEE
Confidence 988864 1 4889999999999999999999999999999999999998644321 1 11 2257999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCC
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPK 429 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~ 429 (541)
+||+++|. .+|++++++++++.++.... .++++.++.....+...++.+ ....++..++.+++.+.|++. +
T Consensus 238 ~sK~l~g~---r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 313 (393)
T TIGR01822 238 LGKALGGA---SGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA-G 313 (393)
T ss_pred ChHHhhCC---CcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-C
Confidence 99999864 37999999999888876322 233334444333333444333 233445556677777777653 2
Q ss_pred ceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHH
Q 009167 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 430 v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
+. + .+. .+.++.+.+.+ ......|.+.|...++.++ |..+ |.. +
T Consensus 314 ~~-~-~~~----------------~~~~~~i~~~~-~~~~~~l~~~L~~~gI~v~-~~~~-----~~~------~----- 357 (393)
T TIGR01822 314 FD-I-KPA----------------DHPIIPVMLYD-AVLAQRFARRLLEEGIYVT-GFFY-----PVV------P----- 357 (393)
T ss_pred CC-C-CCC----------------CCCEEEEEeCC-HHHHHHHHHHHHHCCeeEe-eeCC-----CCC------C-----
Confidence 21 1 110 23466776653 2345677777765677665 3221 110 0
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 510 KYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
-....||+|++..++++.++.+.++|.+
T Consensus 358 ---~~~~~iRis~~~~~t~edi~~~~~~l~~ 385 (393)
T TIGR01822 358 ---KGQARIRVQISAAHTEEQLDRAVEAFTR 385 (393)
T ss_pred ---CCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 0124699999887766666666655543
No 72
>PLN02651 cysteine desulfurase
Probab=99.93 E-value=2.3e-24 Score=226.61 Aligned_cols=301 Identities=18% Similarity=0.190 Sum_probs=204.1
Q ss_pred CccCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~al----l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
+.+++......+++++.|++++|.+ ..+++++|++++++++..+ .++||+|+++..+|+++...+.. +...|+
T Consensus 35 ~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~-~~~~g~ 113 (364)
T PLN02651 35 HLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRH-LQQEGF 113 (364)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHH-HHhcCC
Confidence 3344444566889999999999974 4556666779888877654 47899999999999887665543 346788
Q ss_pred EEEEeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCc
Q 009167 276 TATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGAD 349 (541)
Q Consensus 276 ~v~~vd~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaD 349 (541)
+++.++. .|++++++++++ ++++|++++++|+||.++|+++|.++||++|+++++|++++.+ .+.+..++|+|
T Consensus 114 ~v~~v~~~~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D 192 (364)
T PLN02651 114 EVTYLPVKSDGLVDLDELAAAIRP-DTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVD 192 (364)
T ss_pred EEEEEccCCCCcCCHHHHHHhcCC-CcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCCCC
Confidence 8887764 378999999987 4999999999999999999999999999999999999998875 45667778999
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-------hcCCCchHHHHHHHHHhHHHHHHHH----HHHHHHHH
Q 009167 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMKTLHLRV----QQQNSTAL 418 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-------~~G~~~s~~~a~l~l~~l~tl~~r~----~~~~~~a~ 418 (541)
+++.|.||++|++| .|+++.+++....+..... ...++.+....+.+..+++.+..-. ++..+..+
T Consensus 193 ~~~~s~hK~~gp~G---~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~ 269 (364)
T PLN02651 193 LMSISGHKIYGPKG---VGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRE 269 (364)
T ss_pred EEEechhhhCCCCc---eEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999876665 6777777655443332110 1123344333333334444333222 33334555
Q ss_pred HHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcc
Q 009167 419 RMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 419 ~la~~L~~-~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~ 497 (541)
++.+.|++ .|+++ +..|.- +. ....++++|.+++- ....+...|.. |.++.|..|+.....
T Consensus 270 ~l~~~l~~~~~~~~-i~~~~~---~~--------~~~~~i~~~~~~~~--~~~~~~~~L~~--i~v~~g~~c~~~~~~-- 331 (364)
T PLN02651 270 RLLNGLRAKLGGVR-VNGPRD---PE--------KRYPGTLNLSFAYV--EGESLLMGLKE--VAVSSGSACTSASLE-- 331 (364)
T ss_pred HHHHHHHhhCCCEE-EECCCC---cc--------cCcCCEEEEEeCCC--CHHHHHHHhCC--EEEEchhhcCCCCCC--
Confidence 66666654 45553 333311 10 01356899999752 34566677764 889988765432110
Q ss_pred ccccCCCHHHHHhcCCC----CCeEEEEecCCCHHHHH
Q 009167 498 MSYWDLSQSERLKYGIM----DNLVRFSFGVEDFEDLK 531 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~----~~~IRlSvG~e~~edli 531 (541)
+....+.+|+. .+.||+|++..++++.|
T Consensus 332 ------~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~di 363 (364)
T PLN02651 332 ------PSYVLRALGVPEEMAHGSLRLGVGRFTTEEEV 363 (364)
T ss_pred ------cCHHHHHcCCChHHhCceEEEEcCCCCCHHHc
Confidence 11234455654 47999999999888765
No 73
>PLN02721 threonine aldolase
Probab=99.93 E-value=5.7e-24 Score=221.69 Aligned_cols=285 Identities=18% Similarity=0.218 Sum_probs=199.1
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc-CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC---
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~-pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
|.+|...+||++||+++|.+..+++++|++++..++.+++. +||+|++++++|...+... ..+...|+++..++.
T Consensus 37 ~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~ 115 (353)
T PLN02721 37 GYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENG-GISTLGGVHPRTVKNNED 115 (353)
T ss_pred CCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhccc-chhhhcCceeEecCCCcC
Confidence 44677899999999999998889999999888888888777 9999999999986644210 134456888887763
Q ss_pred --CCHHHHHHhccC------CCceEEEEeCC-CCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCC------ccccc
Q 009167 283 --ADMEGLEAALNN------NNVSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL------NQKAL 344 (541)
Q Consensus 283 --~d~e~Le~al~~------~~tklV~lesP-~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~------~~~~~ 344 (541)
.|++++++++++ .++++|+++++ +||+|.++| +++|.++|+++|+++|+|+++.... .....
T Consensus 116 ~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~ 195 (353)
T PLN02721 116 GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRL 195 (353)
T ss_pred CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHH
Confidence 379999999972 15899999885 688999987 6799999999999999999864321 11222
Q ss_pred ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchH--HHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 009167 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP--NAAYLIIRGMKTLHLRVQQQNSTALRMAK 422 (541)
Q Consensus 345 ~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~--~~a~l~l~~l~tl~~r~~~~~~~a~~la~ 422 (541)
..++|.++.|+||+++++ .||++++++++++.+......+++.+.. ..++.+..+++....++++..++++.+.+
T Consensus 196 ~~~~d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 272 (353)
T PLN02721 196 VKAADSVSVCLSKGLGAP---VGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAE 272 (353)
T ss_pred hhhCCEEEEecccccCCc---eeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 336899999999999865 3556778889888877665544433322 22333344555555556666677788888
Q ss_pred HHHhCCCceE-EeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHHHHccCcCeecccCCcccccccCccccc
Q 009167 423 ILEAHPKVKR-VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 500 (541)
Q Consensus 423 ~L~~~p~v~~-v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~ 500 (541)
.|++.+.+.. +..| .++++++.++.. ......+.+.|...++.+..+
T Consensus 273 ~L~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~-------------- 321 (353)
T PLN02721 273 GLNQIKGLRVNVAAV-----------------ETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPG-------------- 321 (353)
T ss_pred HHHhCCCcEEecCCc-----------------cceEEEEEccCCccccHHHHHHHHHhCCcEEecC--------------
Confidence 8888766532 2111 356889988632 123456777776666655433
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 501 WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 501 ~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
..+.||++++....++.++.+.++|+
T Consensus 322 -------------~~~~lR~~~~~~~~~~~i~~~~~~l~ 347 (353)
T PLN02721 322 -------------NSSRIRVVTHHQISDSDVQYTLSCFQ 347 (353)
T ss_pred -------------CCceEEEEecCcCCHHHHHHHHHHHH
Confidence 13589999985555554555554444
No 74
>PRK02948 cysteine desulfurase; Provisional
Probab=99.93 E-value=3.7e-24 Score=226.18 Aligned_cols=312 Identities=17% Similarity=0.197 Sum_probs=208.6
Q ss_pred CCccCCCCchhHHHHHHHHHHHhCC-CcEEEeCCH-HHHHHHHHHHhc----cCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALEGA-ESTVIMASG-MSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g~-e~~i~~sSG-s~Ai~~al~all----~pGd~Vlv~~~~y~~~~~~~~~~l~~~G 274 (541)
.|..++......+++|+.+|+++|. ++.|++++| ++++..++.+++ ++||+|+++..+|++....+. .++..|
T Consensus 34 ~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~-~~~~~g 112 (381)
T PRK02948 34 LHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQ-SLESQG 112 (381)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHH-HHHhCC
Confidence 3444444456688999999999986 345555555 699988887775 578999999999988766553 456678
Q ss_pred eEEEEeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCC
Q 009167 275 ITATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGA 348 (541)
Q Consensus 275 i~v~~vd~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~ga 348 (541)
+++..++. .|+++|++++++ ++++|++++|+||||.++|+++|.++|+++|+++|+|+++..+ ...+...+++
T Consensus 113 ~~v~~v~~~~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~ 191 (381)
T PRK02948 113 YTVTEIPVDKSGLIRLVDLERAITP-DTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGI 191 (381)
T ss_pred CEEEEEeeCCCCCCCHHHHHHhcCC-CCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCCC
Confidence 88877753 378999999977 4899999999999999999999999999999999999886543 2344456789
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHH-HHHHHH----HhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRN----LHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALR 419 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~l-i~~l~~----~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a~~ 419 (541)
|+++.|+||++|++| .|+++.++++ +..+.. ......++++......+..+++ .+....++..+++++
T Consensus 192 d~~~~s~~K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 268 (381)
T PRK02948 192 DSLSVSAHKIYGPKG---VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSY 268 (381)
T ss_pred CEEEecHHhcCCCCc---EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998776 5777766653 111110 0001122333333333333333 334445566677777
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcccc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
+.+.|++.+. . +...+ .+++ ....+++|.+++- ...++...|...+|.++.|..++....+
T Consensus 269 l~~~L~~~~~-~-v~~~~---~~~~--------~~~~i~~~~~~~~--~~~~~~~~l~~~gI~v~~g~~c~~~~~~---- 329 (381)
T PRK02948 269 FLEQIQTLPL-P-IEVEG---HSTS--------CLPHIIGVTIKGI--EGQYTMLECNRRGIAISTGSACQVGKQE---- 329 (381)
T ss_pred HHHHHhcCCC-C-EEEeC---CCcc--------CcCCEEEEEeCCC--CHHHHHHhcccCCEEEEchHhcCCCCCC----
Confidence 8888877642 1 21111 0111 1345788888742 2355666777789999988765331111
Q ss_pred ccCCCHHHHHhcCC----CCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 500 YWDLSQSERLKYGI----MDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 500 ~~~~~~~~~~~~gi----~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+......+|. ..+.||||+|..++++.++.+.++|++
T Consensus 330 ----p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~ 370 (381)
T PRK02948 330 ----PSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALET 370 (381)
T ss_pred ----CCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 1122333443 247899999998888888888887764
No 75
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.93 E-value=5e-24 Score=225.03 Aligned_cols=301 Identities=17% Similarity=0.159 Sum_probs=204.0
Q ss_pred chhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc---cCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-
Q 009167 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all---~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~- 282 (541)
....+++|+.+++++|.+ +++++++|++++++++..++ ++||+|+++..+|++....+. .++..|++++.++.
T Consensus 41 ~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~-~~~~~G~~v~~v~~~ 119 (379)
T TIGR03402 41 GKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQ-HLEKQGYKVTYLPVD 119 (379)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHH-HHHHcCCEEEEEccC
Confidence 445778899999999974 46666677899999888764 467899999999988765554 34557888888863
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCcc
Q 009167 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATK 357 (541)
Q Consensus 283 ----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~sK 357 (541)
.|++++++++++ ++++|++++++||||.++|+++|.++|+++|+++++|++++.+. +.+....++|+++.|.+|
T Consensus 120 ~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K 198 (379)
T TIGR03402 120 EEGRLDLEELRAAITD-DTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHK 198 (379)
T ss_pred CCCcCCHHHHHHhcCC-CcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHH
Confidence 378999999987 49999999999999999999999999999999999999987653 345556789999999999
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHHh-------hhcCCCchHHHHHHHHHhHHHHHHHH----HHHHHHHHHHHHHHHh
Q 009167 358 FIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGMKTLHLRV----QQQNSTALRMAKILEA 426 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~~~li~~l~~~~-------~~~G~~~s~~~a~l~l~~l~tl~~r~----~~~~~~a~~la~~L~~ 426 (541)
++|+.| .|+++.+++.. +.... ....++.+....+.+..+++.+...+ ++..+....+.+.|.+
T Consensus 199 ~~gp~G---~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 273 (379)
T TIGR03402 199 LHGPKG---VGALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA 273 (379)
T ss_pred cCCCCc---eEEEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 777666 67777665431 11100 01122333222222223333332222 3344555666666664
Q ss_pred -CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCH
Q 009167 427 -HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 505 (541)
Q Consensus 427 -~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~ 505 (541)
.+.+.-. .+. . ...++++.|.+++. ....+...|+..+|.++.|..|+..... +.
T Consensus 274 ~~~~~~~~-~~~--~-----------~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~v~~g~~c~~~~~~--------~~ 329 (379)
T TIGR03402 274 RIPDARLN-GDP--T-----------KRLPNTVNISFEYI--EGEAILLLLDMEGICASSGSACTSGSLE--------PS 329 (379)
T ss_pred hCCCEEEe-CCC--c-----------cCCCCEEEEEecCC--CHHHHHHhhccCCEEEEchhhcCCCCCC--------cC
Confidence 5555322 111 0 01245777777642 3456777888889999988765432111 12
Q ss_pred HHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 506 SERLKYGIM----DNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 506 ~~~~~~gi~----~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.....+|.. .+.||+|++..++++.|+.+.++|++
T Consensus 330 ~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~ 368 (379)
T TIGR03402 330 HVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP 368 (379)
T ss_pred HHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 334455543 47899999998888888888777754
No 76
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.93 E-value=9.6e-24 Score=223.08 Aligned_cols=294 Identities=16% Similarity=0.216 Sum_probs=195.5
Q ss_pred cCCCCch-hHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 204 YGRYGNP-TTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p-~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+..|+.+ ...+||+++|+++|. +++++++++++++..++.+++.+||+|++++|+|.... ..++..|.++..+
T Consensus 59 ~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v 134 (380)
T PRK06225 59 YCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIID----NFASRFGAEVIEV 134 (380)
T ss_pred CCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHHhCceEEee
Confidence 3445554 468899999999987 35677777779999999999999999999999998643 3344567777666
Q ss_pred CC--------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----cccc
Q 009167 281 DP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS 345 (541)
Q Consensus 281 d~--------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----~~~~ 345 (541)
+. .|++++++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... ....
T Consensus 135 ~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 213 (380)
T PRK06225 135 PIYSEECNYKLTPELVKENMDE-NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYA 213 (380)
T ss_pred ccccccCCccCCHHHHHhhcCC-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcC
Confidence 42 378999999887 4999999999999999986 778999999999999999997532111 1112
Q ss_pred cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH---HHHHHHHH-HHHHHHHHH
Q 009167 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQ-QNSTALRMA 421 (541)
Q Consensus 346 ~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~---tl~~r~~~-~~~~a~~la 421 (541)
....+++.|+||++|.+| ...|++++++++++.++..... ....+...+..+...+. .+..++.+ ..++...+.
T Consensus 214 ~~~~i~~~s~SK~~g~~G-~RiG~i~~~~~l~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~ 291 (380)
T PRK06225 214 PEHTVTSYSFSKIFGMAG-LRIGAVVATPDLIEVVKSIVIN-DLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIK 291 (380)
T ss_pred CCCEEEEeechhhcCCcc-ceeEEEecCHHHHHHHHHHHhc-ccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 235688899999997555 5689999999998888765421 12223333333333332 22222222 234455566
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcccccc
Q 009167 422 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW 501 (541)
Q Consensus 422 ~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~ 501 (541)
+.|++.+.+....+| ..|+++++.++.......+|.+.|...++.+..|..++ +
T Consensus 292 ~~L~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~----~------ 345 (380)
T PRK06225 292 EAVDEIEGVFLPVYP----------------SHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTS----K------ 345 (380)
T ss_pred HHHHhCcCCccccCC----------------CCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccC----c------
Confidence 777765443211122 14678899886321234566666666677777663321 0
Q ss_pred CCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHhh
Q 009167 502 DLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALHA 540 (541)
Q Consensus 502 ~~~~~~~~~~gi~~~~IRlSvG~--e~~edli~dL~~AL~~ 540 (541)
...++.+|+|++. |+.+.+++.|.+++++
T Consensus 346 ----------~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 346 ----------RFGDRYIRVSFSIPREQVEVFCEEFPDVVET 376 (380)
T ss_pred ----------CCCCceEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 0125689999987 3456666666666654
No 77
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.93 E-value=8.3e-24 Score=225.98 Aligned_cols=286 Identities=15% Similarity=0.149 Sum_probs=194.2
Q ss_pred CCCchhHHHHHHHHHHHh----C---C--CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 206 RYGNPTTVVVEEKMSALE----G---A--ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~----g---~--e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
+|+......|++.+|+++ | . ++.|++++|+ +++..++.+++++||+|+++.|+|..... .++..|.
T Consensus 77 ~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~----~~~~~g~ 152 (410)
T PRK06290 77 GYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGT----HTKYYGG 152 (410)
T ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHH----HHHHcCC
Confidence 455566778999999885 3 2 2357777776 89999999999999999999999988553 3445677
Q ss_pred EEEEeCCC-------CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-c--
Q 009167 276 TATVIDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-K-- 342 (541)
Q Consensus 276 ~v~~vd~~-------d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-~-- 342 (541)
++..++.+ |++++++++.+ ++++|++++||||||.+++ +++|.++|++||++||+||+|...... .
T Consensus 153 ~v~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~ 231 (410)
T PRK06290 153 EVYNLPLLEENNFLPDLDSIPKDIKE-KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPL 231 (410)
T ss_pred EEEEEecCCCcCCcCCHHHHHHhhcc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCc
Confidence 77776532 68888888876 5999999999999999999 568888899999999999998754211 1
Q ss_pred c---c--ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH---HHHHHHHHHH
Q 009167 343 A---L--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQN 414 (541)
Q Consensus 343 ~---~--~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~---tl~~r~~~~~ 414 (541)
+ . ..+.+|++.|+||.++.+| ++.|++++++++++.+...........+.....++...++ .+....++..
T Consensus 232 s~~~~~~~~~~~I~i~SfSK~~g~~G-lRiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~ 310 (410)
T PRK06290 232 SFLSVPGAKEVGVEIHSLSKAYNMTG-WRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYS 310 (410)
T ss_pred ChhcCCCccccEEEEeechhhcCCch-hheEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 1 1 1235699999999997665 4589999999999888776554443333233333333332 2333344455
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH------HHHHHHHHHccCcC-eecccCC
Q 009167 415 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL------TATIKFIDALKIPY-IAPSFGG 487 (541)
Q Consensus 415 ~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~------~~~~~~l~~L~~~~-iavS~G~ 487 (541)
++++.+.+.|++++ +. +..|. .|.++|+.+++.. ....+|.+.|...+ +.+..|+
T Consensus 311 ~~~~~l~~~L~~~g-~~-~~~p~----------------g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~ 372 (410)
T PRK06290 311 RRLDKLVKILNEVG-FK-AEMPG----------------GTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWD 372 (410)
T ss_pred HHHHHHHHHHHhCC-Ce-ecCCC----------------eeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCc
Confidence 67777888887752 21 22121 2345677886421 13455666664332 2221221
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEec-----CCCHHHHHHHHHHHHhh
Q 009167 488 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG-----VEDFEDLKADVLQALHA 540 (541)
Q Consensus 488 ~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG-----~e~~edli~dL~~AL~~ 540 (541)
. .++++||+++ .|+.+.+++.|.++|..
T Consensus 373 ~-------------------------~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 373 D-------------------------AGHFLRFSVTFEAKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred c-------------------------ccCeEEEEEEcccccccchhHHHHHHHHHHhh
Confidence 0 1258999997 35567788888888875
No 78
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=6.5e-24 Score=222.39 Aligned_cols=283 Identities=19% Similarity=0.281 Sum_probs=197.2
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+.+|+++...+||+.||+++|.. +.|++++|+ +++.+++.+++++||+|+++.|+|.... ..++..|+++..+
T Consensus 57 ~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~i 132 (356)
T PRK04870 57 LNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYR----MSAKLAGLEFVGV 132 (356)
T ss_pred cccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHH----HHHHHcCCEEEEe
Confidence 34556666789999999999863 357777776 8999999999999999999999998643 3455678888877
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc----ccccCCcEE
Q 009167 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK----ALSLGADLV 351 (541)
Q Consensus 281 d~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~----~~~~gaDiv 351 (541)
+. .|+++|++++...++++|++++|+||||.+++.+++.++++..++++|+|++|....... .......++
T Consensus 133 ~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~ 212 (356)
T PRK04870 133 PLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLV 212 (356)
T ss_pred cCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEE
Confidence 53 378999999865459999999999999999999988888877789999999986432211 112234589
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCC
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~L~~~p 428 (541)
+.|+|| ++.+| ...|++++++++++.++.....+ ..+....+.+...+ +.+....++..++++.+.+.|++.+
T Consensus 213 ~~S~SK-~~~~G-lRiG~~i~~~~~i~~~~~~~~~~--~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 288 (356)
T PRK04870 213 MRTVSK-LGLAG-LRLGYLAGHPAWIAELDKVRPPY--NVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALP 288 (356)
T ss_pred Eecchh-hhhHH-HhhhhhhCCHHHHHHHHHccCCC--cCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999 66555 45789999999998887654322 23333333322232 3344445556677777888888766
Q ss_pred CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHH
Q 009167 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
++. + +|. .|+++++.++ + ...+.+.|+..++.+..|..+.
T Consensus 289 ~~~-~-~~~----------------~~~~~~~~~~-~---~~~~~~~l~~~gI~v~~~~~f~------------------ 328 (356)
T PRK04870 289 GVT-V-FPS----------------AANFILVRVP-D---AAAVFDGLKTRGVLVKNLSGMH------------------ 328 (356)
T ss_pred CcE-E-CCC----------------CCeEEEEECC-C---HHHHHHHHHHCCEEEEECCCCC------------------
Confidence 552 2 231 4678999886 2 2455666666777777654321
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 509 LKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+..++++|||++.. +..+.|.++|++
T Consensus 329 ---~~~~~~iRis~~~~---~~~~~l~~al~~ 354 (356)
T PRK04870 329 ---PLLANCLRVTVGTP---EENAQFLAALKA 354 (356)
T ss_pred ---CCCCCeEEEeCCCH---HHHHHHHHHHHH
Confidence 01257899999952 334555555554
No 79
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.93 E-value=1.2e-23 Score=223.35 Aligned_cols=295 Identities=19% Similarity=0.174 Sum_probs=199.1
Q ss_pred hhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-
Q 009167 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~al---l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~- 283 (541)
+..+++++.+++++|.+ ..++++++++++..++.++ +++||+|++++++|.+....+...++..|+++.+++.+
T Consensus 60 ~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~ 139 (397)
T TIGR01976 60 QVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDE 139 (397)
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccc
Confidence 45789999999999974 3444555568887776665 68999999999999987766655566778888877542
Q ss_pred -----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCcc
Q 009167 284 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATK 357 (541)
Q Consensus 284 -----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~sK 357 (541)
|++++++++++ ++++|++++|+||||.+.|+++|.++|+++|+++++|+++..+. ..+..++++|+++.|+||
T Consensus 140 ~~~~~~~~~l~~~i~~-~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K 218 (397)
T TIGR01976 140 ATGELHPDDLASLLSP-RTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYK 218 (397)
T ss_pred cCCCcCHHHHHHhcCC-CceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechh
Confidence 68999999987 49999999999999999999999999999999999999975432 334456789999999999
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHHhhh----------cCCCchHHHHHHHHHhHHHHH-------------------H
Q 009167 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHV----------LGGALNPNAAYLIIRGMKTLH-------------------L 408 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~~~li~~l~~~~~~----------~G~~~s~~~a~l~l~~l~tl~-------------------~ 408 (541)
++|+. .|++++++++++.+...... ..++.+......+..+++.+. .
T Consensus 219 ~~g~~----~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~ 294 (397)
T TIGR01976 219 FFGPH----MGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQA 294 (397)
T ss_pred hcCCc----eEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHH
Confidence 99642 68898898887766532211 112222222222222222221 1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCc
Q 009167 409 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 409 r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
..++..+..+++.+.|++.+.++ +..+. . +. ..++++.|.+++. ....+.+.|+..++.++.|..
T Consensus 295 ~~~~~~~l~~~l~~~L~~~~~~~-~~~~~-~--~~---------~~~~~~~~~~~~~--~~~~l~~~L~~~gI~v~~~~~ 359 (397)
T TIGR01976 295 IDAYENRLAEYLLVGLSDLPGVT-LYGVA-R--LA---------ARVPTVSFTVHGL--PPQRVVRRLADQGIDAWAGHF 359 (397)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EeCCC-C--cc---------CCCceEEEEeCCc--CHHHHHHHHHHCCeEEEeCcc
Confidence 11222344555666666655443 32221 0 00 1356888888642 345677777777888876654
Q ss_pred ccccccCccccccCCCHHHHHhcCCC--CCeEEEEecCCCHHHHHHHHHHHH
Q 009167 489 ESIVDQPAIMSYWDLSQSERLKYGIM--DNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~--~~~IRlSvG~e~~edli~dL~~AL 538 (541)
+.. ......+++ .+.||+|++..++++.++.|.++|
T Consensus 360 ~~~--------------~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 360 YAV--------------RLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred chH--------------HHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 321 011223332 468999999999888788777654
No 80
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.93 E-value=2e-23 Score=220.84 Aligned_cols=276 Identities=16% Similarity=0.172 Sum_probs=187.5
Q ss_pred cCCCCch-hHHHHHHHHHHHhC----C----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009167 204 YGRYGNP-TTVVVEEKMSALEG----A----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 204 Y~R~~~p-~~~~Le~~LA~l~g----~----e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
+.+|+.+ ...+||+.+|++++ . ++.+++++| ++++..++..++++||+|++++|+|+.... .++..
T Consensus 60 ~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~----~~~~~ 135 (383)
T TIGR03540 60 NHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRI----GTLFA 135 (383)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHH----HHHhc
Confidence 3455554 35678888888753 2 234666555 599999999999999999999999988553 34456
Q ss_pred CeEEEEeCCC-------CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc---
Q 009167 274 GITATVIDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (541)
Q Consensus 274 Gi~v~~vd~~-------d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~--- 340 (541)
|.++..++.+ |++++++++.+ ++++|++++|+||||.+++ +++|+++|++||+++|+|++|.....
T Consensus 136 G~~v~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~ 214 (383)
T TIGR03540 136 GGEPYEMPLKEENGFLPDFDAIPEDIAK-KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGY 214 (383)
T ss_pred CCEEEEEecCcccCCccCHHHHHhhccc-cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCC
Confidence 7777666431 67889888876 5999999999999999999 67889999999999999999864321
Q ss_pred --cc--ccc--cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHH
Q 009167 341 --QK--ALS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRV 410 (541)
Q Consensus 341 --~~--~~~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~ 410 (541)
.. .+. ....+++.|+||.+|.+| ++.|++++++++++++.......+...+......+...++ .+....
T Consensus 215 ~~~~~~~~~~~~~~~i~~~SfSK~~g~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 293 (383)
T TIGR03540 215 KAPSFLEVDGAKDVGIEFHSLSKTYNMTG-WRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIR 293 (383)
T ss_pred CCcCcccCCCcccCEEEEEecccccCCcc-ceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHH
Confidence 11 111 124588899999997665 5689999999999888776554443333333333333332 233334
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCcc
Q 009167 411 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCE 489 (541)
Q Consensus 411 ~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~ 489 (541)
+...+++..+.+.|+++ ++. +..|. .|.++|+.++++ ....+|.+.| +..++.+..|..+
T Consensus 294 ~~~~~~~~~~~~~L~~~-~~~-~~~~~----------------~~~~~~~~l~~~-~~~~~~~~~ll~~~gi~v~~g~~f 354 (383)
T TIGR03540 294 KIYQRRRDLLLEALKKI-GID-VEKPK----------------ATFYVWVPVPEG-YTSAEFAARLLEETGVVVTPGVGF 354 (383)
T ss_pred HHHHHHHHHHHHHHHhC-CCE-ecCCC----------------cceEEEEECCCC-CCHHHHHHHHHHHCCEEEecchhh
Confidence 45556777888888876 332 22221 344689998743 2345666664 4557777776543
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009167 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 525 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e 525 (541)
.. ..++++|||++..
T Consensus 355 ~~---------------------~~~~~~Ris~~~~ 369 (383)
T TIGR03540 355 GE---------------------YGEGYIRISLTVP 369 (383)
T ss_pred Cc---------------------cCCCeEEEEecCC
Confidence 11 0246899999953
No 81
>PRK08960 hypothetical protein; Provisional
Probab=99.93 E-value=2.6e-23 Score=220.33 Aligned_cols=283 Identities=16% Similarity=0.121 Sum_probs=188.5
Q ss_pred chhHHHHHHHHHHHhC------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 209 NPTTVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g------~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.....+||+.||++++ . +++++++++++++..++..++++||+|++++|+|+.....+. ..|.++..+
T Consensus 68 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~----~~g~~~~~v 143 (387)
T PRK08960 68 ARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLR----LVEGAAQLV 143 (387)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hcCCeEEEE
Confidence 3456789999999863 2 345555555699999999999999999999999998765443 335555544
Q ss_pred CC-------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHH---HHHHHHHhCCCEEEEeCCCCCCCcc----ccccc
Q 009167 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQ----KALSL 346 (541)
Q Consensus 281 d~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~---~Ia~la~~~gi~lIvDea~a~~~~~----~~~~~ 346 (541)
+. .|+++++++++++ +++|++++|+||||.+++.+ +|+++|+++|+++|+||+|...... .....
T Consensus 144 ~~~~~~~~~~d~~~l~~~~~~~-~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~ 222 (387)
T PRK08960 144 PVGPDSRYQLTPALVERHWNAD-TVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEV 222 (387)
T ss_pred ecCcccCCCCCHHHHHHHhCcc-ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhc
Confidence 32 3688999988874 89999999999999999854 6777899999999999998653221 11122
Q ss_pred -CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH-----HHHHHHHHHHHHHHHH
Q 009167 347 -GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRM 420 (541)
Q Consensus 347 -gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~-----tl~~r~~~~~~~a~~l 420 (541)
...+++.|+||.+|.+| ...|++++++++++.+......+....+...+.++...+. .+....+...++++.+
T Consensus 223 ~~~vi~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l 301 (387)
T PRK08960 223 DDDAFVLNSFSKYFGMTG-WRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFL 301 (387)
T ss_pred cCCEEEEeecccccCCcc-cEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHH
Confidence 23478899999998666 5689999999999888776655544444444333333332 2333334445667777
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCcccccccCcccc
Q 009167 421 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 421 a~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
.+.|++++ +..+..|. .|.++|++++........|.+.| +..++.+..|..++.
T Consensus 302 ~~~L~~~~-~~~~~~p~----------------g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------- 356 (387)
T PRK08960 302 LPALRELG-FGIAVEPQ----------------GAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGR-------- 356 (387)
T ss_pred HHHHHhcC-CcCCcCCC----------------eeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCC--------
Confidence 88887753 21111221 46678998863111235565554 446777777754321
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009167 500 YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVL 535 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~ 535 (541)
+..++++||+++. +.+.+.+.++
T Consensus 357 ------------~~~~~~iRi~~~~-~~~~l~~al~ 379 (387)
T PRK08960 357 ------------HQAGQHVRFAYTQ-SLPRLQEAVE 379 (387)
T ss_pred ------------CCCCCeEEEEecC-CHHHHHHHHH
Confidence 0124689999997 4555544443
No 82
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.93 E-value=3.1e-23 Score=215.60 Aligned_cols=286 Identities=20% Similarity=0.209 Sum_probs=203.7
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHH
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~ 287 (541)
..+..+++++.+++++|.++.+++++|++++..++.+++++||+|+++++.|.+.... +...|+++..++..|+++
T Consensus 44 ~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~ 119 (349)
T cd06454 44 TSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDG----IRLSGAKKRIFKHNDMED 119 (349)
T ss_pred CchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHH----HHHcCCceEEecCCCHHH
Confidence 4788899999999999998899999999999988898999999999999999886533 344688888777778888
Q ss_pred HHHhccC----CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc---------ccccccCCcEEEEC
Q 009167 288 LEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---------QKALSLGADLVLHS 354 (541)
Q Consensus 288 Le~al~~----~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~---------~~~~~~gaDivv~S 354 (541)
+++++++ .++++|++++++||+|.+.|+++|+++|+++|+++|+|++++.+.. ......+.|+++.|
T Consensus 120 le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s 199 (349)
T cd06454 120 LEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGT 199 (349)
T ss_pred HHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEee
Confidence 8888864 3478999999999999999999999999999999999999864321 11123578999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCchHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCC
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPK 429 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~s~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~ 429 (541)
+||.+++. +|++++++++++.++..... .++..++.....+...++.+ ..+.++..++++.+.+.|.++.
T Consensus 200 ~sK~~~~~----gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g- 274 (349)
T cd06454 200 LGKAFGAV----GGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKELG- 274 (349)
T ss_pred chhhhccc----CCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC-
Confidence 99999863 48888888888877654332 23345555444444455443 3345556667777777776642
Q ss_pred ceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHH
Q 009167 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 430 v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
+. +..+ + .+.++++.++. .....++.+.|...++.++.++....
T Consensus 275 ~~-~~~~-----~-----------~~~~~~~~~~~-~~~~~~~~~~L~~~gI~~~~~~~~~~------------------ 318 (349)
T cd06454 275 FP-VGGS-----P-----------SHIIPPLIGDD-PAKAVAFSDALLERGIYVQAIRYPTV------------------ 318 (349)
T ss_pred Cc-ccCC-----C-----------CCcEEEEeCCC-hHHHHHHHHHHHhCCceEEEecCCcc------------------
Confidence 21 1001 0 12234444432 23456777777655766654321000
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 510 KYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
....+.||++++...+++.++.+.++|++
T Consensus 319 --~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 347 (349)
T cd06454 319 --PRGTARLRISLSAAHTKEDIDRLLEALKE 347 (349)
T ss_pred --CCCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 01247899999988777888888888765
No 83
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.6e-23 Score=220.47 Aligned_cols=284 Identities=19% Similarity=0.256 Sum_probs=195.5
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC-cEEEeCCH-HHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASG-MSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSG-s~Ai~~al~all~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
..+|+++...+|+++||+++|.+ +.|++++| ++++.+++.+++.+| |.|++++|.|.... ..++..|.++..+
T Consensus 53 ~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~----~~~~~~g~~~~~v 128 (364)
T PRK04781 53 TRRYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA----VCARLQNAPLVEV 128 (364)
T ss_pred hccCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEE
Confidence 56788888899999999999873 35556555 599999999999999 79999999886533 2334557777776
Q ss_pred CC--------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHh--CCCEEEEeCCCCCCCccc-c---c-c
Q 009167 281 DP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK-A---L-S 345 (541)
Q Consensus 281 d~--------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~--~gi~lIvDea~a~~~~~~-~---~-~ 345 (541)
+. .|++++++.+...++++|++++||||||.+++.+++.++++. ++++||+||+|....... . . .
T Consensus 129 ~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~ 208 (364)
T PRK04781 129 PLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLAR 208 (364)
T ss_pred ecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhh
Confidence 53 156777555432359999999999999999998888777764 478999999987543211 1 1 1
Q ss_pred cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH-----HHHHHHHHHHHHHHHHH
Q 009167 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRM 420 (541)
Q Consensus 346 ~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l-----~tl~~r~~~~~~~a~~l 420 (541)
...-+++.||||.+|-+| ++.||+++++++++.+++....++. +.....++...+ ..+..++++..++++.+
T Consensus 209 ~~~vi~~~SfSK~~gl~G-lRvGy~v~~~~l~~~l~~~~~~~~~--~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l 285 (364)
T PRK04781 209 YDNLAVLRTLSKAHALAA-ARIGSLIANAELIAVLRRCQAPYPV--PTPCAALAEQALSAPALAVTARRVAEVRAERERL 285 (364)
T ss_pred CCCEEEEecChhhccccc-ceeeeeeCCHHHHHHHHhccCCCCC--CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 234588999999998554 4689999999999998877654443 333222333333 23344455566777888
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccc
Q 009167 421 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 500 (541)
Q Consensus 421 a~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~ 500 (541)
.+.|++++.+..+ +|. .|++++++++. ...+.+.+...++.+..|..+ +
T Consensus 286 ~~~L~~~~~~~~~-~p~----------------~g~f~~~~~~~----~~~~~~~l~~~gI~v~~~~~~-----~----- 334 (364)
T PRK04781 286 HAALAQLPGVRRV-YPS----------------QGNFLLVRFDD----AEAAFQALLAAGVVVRDQRAA-----P----- 334 (364)
T ss_pred HHHHHhCCCCCeE-CCC----------------CCcEEEEEcCC----HHHHHHHHHHCCeEEeeCCCC-----C-----
Confidence 8888877654333 332 57889999863 245566666667777665321 0
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHH
Q 009167 501 WDLSQSERLKYGIMDNLVRFSFGVED-FEDLKADVLQA 537 (541)
Q Consensus 501 ~~~~~~~~~~~gi~~~~IRlSvG~e~-~edli~dL~~A 537 (541)
+ .++++||++|..+ .+.+++.|++.
T Consensus 335 -----------~-~~~~~Ris~~~~~~~~~l~~al~~~ 360 (364)
T PRK04781 335 -----------R-LSDALRITLGTPEQNDRVLAALQRT 360 (364)
T ss_pred -----------C-CCCeEEEeCCCHHHHHHHHHHHHHH
Confidence 1 2568999999743 35555555543
No 84
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=6.4e-24 Score=220.62 Aligned_cols=279 Identities=18% Similarity=0.213 Sum_probs=184.6
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
+.||+++...+|+++||+++|.+ ..|++++|+ +++.+++. ++.+|+ |++..|+|.... ..++..|+++..++
T Consensus 34 ~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~----~~~~~~G~~v~~vp 107 (332)
T PRK06425 34 ISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYK----GYAFTHGIRISALP 107 (332)
T ss_pred cccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHH----HHHHHcCCeEEEEe
Confidence 57899999999999999999973 456666666 89988886 567765 666689998754 44556688888776
Q ss_pred CC----CHHHHHHhccCCCceEEEEeCCCCCCCccccH---HHHHHHHHhCCCEEEEeCCCCCCCccc--c-c----ccC
Q 009167 282 PA----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQK--A-L----SLG 347 (541)
Q Consensus 282 ~~----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl---~~Ia~la~~~gi~lIvDea~a~~~~~~--~-~----~~g 347 (541)
.+ |++.++ ..++++|++++||||||.+++. ++|+++|+++|++||+||+|....... + . ..+
T Consensus 108 ~~~~~~~~~~l~----~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~ 183 (332)
T PRK06425 108 FNLINNNPEILN----NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYG 183 (332)
T ss_pred CCcccCcHHHHh----hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCC
Confidence 53 333332 2258999999999999999984 567777889999999999987653211 1 1 123
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHH-hHHHH-HHHHHHHHHHHHHHHHHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR-GMKTL-HLRVQQQNSTALRMAKILE 425 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~-~l~tl-~~r~~~~~~~a~~la~~L~ 425 (541)
..+++.||||.++-+| ++.||+++++++++.+......+. ++......+.. ..+.+ ....+...+.++.+.+.|+
T Consensus 184 ~vi~~~SfSK~~~l~G-lRiGy~v~~~~li~~l~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 260 (332)
T PRK06425 184 NVIIGRSLTKILGIPS-LRIGYIATDDYNMKISRKITEPWS--VCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLE 260 (332)
T ss_pred CEEEEeecHHhcCCch-hhheeeecCHHHHHHHHHcCCCCc--cCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999998555 457999999999988876543332 22222222111 11222 2233444566777788887
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCH
Q 009167 426 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 505 (541)
Q Consensus 426 ~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~ 505 (541)
++. +. +..|. .|+++++.++ + ..+|.+.|...++.+..|..+.
T Consensus 261 ~~g-~~-~~~~~----------------~g~f~~~~~~-~---~~~~~~~l~~~gi~v~~~~~f~--------------- 303 (332)
T PRK06425 261 AMG-FR-AAGDP----------------SANFITFMIP-D---AHDFYSYLLKNGILVRLLDDYE--------------- 303 (332)
T ss_pred HCC-CE-ECCCC----------------CceEEEEEcC-C---HHHHHHHHHHCCeEEEECCCCC---------------
Confidence 652 32 22121 4678999886 2 3455666655677777664421
Q ss_pred HHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHH
Q 009167 506 SERLKYGIMDNLVRFSFGVE-DFEDLKADVLQAL 538 (541)
Q Consensus 506 ~~~~~~gi~~~~IRlSvG~e-~~edli~dL~~AL 538 (541)
+..+++||||+|.. +.+.+++.|++.+
T Consensus 304 ------~~~~~~iRis~~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 304 ------CLGEQYIRIAIRRRSFNIKLVNALRNFL 331 (332)
T ss_pred ------CCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 01247999999974 3445555555443
No 85
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.93 E-value=1e-23 Score=226.67 Aligned_cols=285 Identities=16% Similarity=0.169 Sum_probs=195.3
Q ss_pred CCCchh-HHHHHHHHHHHhCC----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEE
Q 009167 206 RYGNPT-TVVVEEKMSALEGA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 206 R~~~p~-~~~Le~~LA~l~g~----e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
+|+.+. ..+|++.++++++. ++.|++++| ++|+.+++.++++|||.|++++|+|..... .++..|+++..
T Consensus 116 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~----~~~~~g~~~~~ 191 (431)
T PRK15481 116 LYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSIN----MLRYAGFSASP 191 (431)
T ss_pred hcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH----HHHHcCCeEEe
Confidence 344443 46788999988752 335555555 499999999999999999999999988653 34456777777
Q ss_pred eCC----CCHHHHHHhccCCCceEEEEe-CCCCCCCccccHH---HHHHHHHhC-CCEEEEeCCCCCCCc---cccc--c
Q 009167 280 IDP----ADMEGLEAALNNNNVSLFFTE-SPTNPFLRCVDVK---LVSDLCHKK-GAIVCIDGTFATPLN---QKAL--S 345 (541)
Q Consensus 280 vd~----~d~e~Le~al~~~~tklV~le-sP~NPtG~i~dl~---~Ia~la~~~-gi~lIvDea~a~~~~---~~~~--~ 345 (541)
++. .|+++|++++++ ++|+++++ +||||||.+++.+ +|.++|+++ +++||+||+|..... ..++ .
T Consensus 192 v~~~~~g~~~~~l~~~~~~-~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 270 (431)
T PRK15481 192 VSVDAEGMQPEKLERALAQ-GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQT 270 (431)
T ss_pred eccCCCCCCHHHHHHHHhc-CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCC
Confidence 653 378999998876 48998887 9999999999976 899999999 999999999875321 1111 1
Q ss_pred cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH------HHHHHHHHHHHHHH
Q 009167 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTALR 419 (541)
Q Consensus 346 ~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t------l~~r~~~~~~~a~~ 419 (541)
....+++.||||.++ +| ...||+++++++++.+..........++...+.++...++. +....+...++.+.
T Consensus 271 ~~~vi~~~SfSK~~~-~G-lRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~ 348 (431)
T PRK15481 271 TQRWALIRSVSKALG-PD-LRLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQK 348 (431)
T ss_pred CCCEEEEeeeccccC-CC-ceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 234589999999999 55 56899999999998887654433333455555544444432 22333445566777
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcccc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
+.+.|+++ .+. +..|. .|.++|+.++.+ ...+.+.|...++.+..|..+.. +
T Consensus 349 ~~~~L~~~-~~~-~~~p~----------------gg~f~~~~l~~~---~~~~~~~l~~~gV~v~pg~~f~~---~---- 400 (431)
T PRK15481 349 LARALQQY-GIA-IPSPG----------------DGLNLWLPLDTD---SQATALTLAKSGWLVREGEAFGV---S---- 400 (431)
T ss_pred HHHHHHHc-CCc-cccCC----------------CeEEEEEECCCC---HHHHHHHHHHCCcEEecCCcccc---C----
Confidence 77888765 221 21222 577899999742 34555666556888877755421 0
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHH
Q 009167 500 YWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQAL 538 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~~~~IRlSvG~e~~---edli~dL~~AL 538 (541)
...+++|||++..+. ++.++.|.+++
T Consensus 401 -------------~~~~~iRis~~~~~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 401 -------------APSHGLRITLSTLNDAEINRLAADLHQAL 429 (431)
T ss_pred -------------CCCCeEEEEcCCCChHHHHHHHHHHHHHh
Confidence 013589999997543 44455555554
No 86
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.1e-23 Score=219.02 Aligned_cols=284 Identities=16% Similarity=0.173 Sum_probs=195.0
Q ss_pred hhHHHHHHHHHHHh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 210 PTTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g~----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
.....||+.||+++ |. ++.++++++++|+..++.+++++||+|++++|+|..... .++..|+++..++
T Consensus 68 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~~~ 143 (393)
T PRK05764 68 AGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPE----MVKLAGGVPVFVP 143 (393)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCCEEEEEe
Confidence 44678999999887 32 345666666799999999999999999999999987543 3445678877776
Q ss_pred CC-------CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc----c----
Q 009167 282 PA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A---- 343 (541)
Q Consensus 282 ~~-------d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~----~---- 343 (541)
.+ |++++++++++ ++++|++++|+||||.+++ +++|.++|++||+++|+|++|....... +
T Consensus 144 ~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 222 (393)
T PRK05764 144 TGEENGFKLTVEQLEAAITP-KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASL 222 (393)
T ss_pred cCcccCCcCCHHHHHHhhCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHc
Confidence 42 57899999876 4999999999999999986 7789999999999999999987533210 1
Q ss_pred --cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHH
Q 009167 344 --LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (541)
Q Consensus 344 --~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a 417 (541)
...+.++++.|+||.++.+| ...|++++++++++.++......+..+++..++.+.+.++ .+....++..+++
T Consensus 223 ~~~~~~~~i~~~s~SK~~~~~G-~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 301 (393)
T PRK05764 223 SPELRDRTITVNGFSKAYAMTG-WRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERR 301 (393)
T ss_pred CCCCcCCEEEEecCcccccCcc-ceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 11246799999999998665 3579999999999988876655555566666555555553 2223334444566
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHH----HHHHHHHHc-cCcCeecccCCccccc
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT----ATIKFIDAL-KIPYIAPSFGGCESIV 492 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~----~~~~~l~~L-~~~~iavS~G~~~sl~ 492 (541)
..+.+.|++++.+. +..| ..|.++|+.++.... ...++.+.+ +..++.+..|..+.
T Consensus 302 ~~l~~~L~~~~g~~-~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~-- 362 (393)
T PRK05764 302 DLMVDGLNEIPGLE-CPKP----------------EGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFG-- 362 (393)
T ss_pred HHHHHHHhhCCCCc-ccCC----------------CcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccC--
Confidence 77778887765432 1111 134467888764211 124555544 44577777664421
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009167 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~ 539 (541)
. +++||||++.. +.++.++.|.++++
T Consensus 363 --------------------~-~~~vRis~~~~~~~~~~~i~~l~~~~~ 390 (393)
T PRK05764 363 --------------------A-PGYVRLSYATSLEDLEEGLERIERFLE 390 (393)
T ss_pred --------------------C-CCEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1 47899999862 23444555555544
No 87
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=3.7e-24 Score=224.12 Aligned_cols=280 Identities=17% Similarity=0.224 Sum_probs=194.3
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.+||+++...+|++++|+++|.+ +.|++++|+ +++.+++.+++++| |+|+++.|+|.... ..++..|+++..+
T Consensus 51 ~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~----~~~~~~G~~~~~v 126 (351)
T PRK01688 51 LNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS----VSAETIGVEIRTV 126 (351)
T ss_pred cccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH----HHHHHcCCEEEEe
Confidence 67889999999999999999973 455566665 99999999999997 89999999997643 3445568887776
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHh--CCCEEEEeCCCCCCCccc-c----cccCC
Q 009167 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK-A----LSLGA 348 (541)
Q Consensus 281 d~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~--~gi~lIvDea~a~~~~~~-~----~~~ga 348 (541)
+. .|++++++++ + ++++|++++||||||.+++.++|.++++. .+++||+||+|....... . ...+.
T Consensus 127 ~~~~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n 204 (351)
T PRK01688 127 PTLDNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPH 204 (351)
T ss_pred ecCCCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCC
Confidence 53 2688998887 3 48999999999999999997777766653 268999999987654211 1 12334
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l-----~tl~~r~~~~~~~a~~la~~ 423 (541)
-+++.|+||.+|..| +..|++++++++++.+++....++ ++...+..+...+ +.+..+.+...++++++.+.
T Consensus 205 ~iv~rSfSK~~glaG-lRiGy~i~~~~~i~~l~~~~~~~~--v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~ 281 (351)
T PRK01688 205 LVILRTLSKAFALAG-LRCGFTLANEEVINLLLKVIAPYP--LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAA 281 (351)
T ss_pred EEEEecchHhhcCHH-HHHhHHhCCHHHHHHHHhccCCCC--CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999998555 457899999999988887654433 2222222222222 34445556666777888888
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCC
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 503 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~ 503 (541)
|++++.+..+ +|. .++++++.++. ...+.+.|...++.+..++.+
T Consensus 282 L~~~~~~~~~-~ps----------------~~nfi~~~~~~----~~~l~~~L~~~gi~vr~~~~~-------------- 326 (351)
T PRK01688 282 LKEIPCVEQV-FDS----------------ETNYILARFTA----SSAVFKSLWDQGIILRDQNKQ-------------- 326 (351)
T ss_pred HHhCCCCCeE-CCC----------------CCcEEEEEcCC----HHHHHHHHHHCCeEEEECCCc--------------
Confidence 8877654322 332 46788888852 345566665567766543211
Q ss_pred CHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 504 SQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 504 ~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
.|. ++++|||+|.+ +..+.|.++|
T Consensus 327 -------~~~-~~~iRis~~~~---~e~~~l~~al 350 (351)
T PRK01688 327 -------PGL-SNCLRITIGTR---EECQRVIDAL 350 (351)
T ss_pred -------CCC-CCeEEEeCCCH---HHHHHHHHhh
Confidence 122 56899999953 3445555554
No 88
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.7e-23 Score=222.01 Aligned_cols=273 Identities=14% Similarity=0.168 Sum_probs=187.4
Q ss_pred CchhHHHHHHHHHHHh----C--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEE
Q 009167 208 GNPTTVVVEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~----g--~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
+.+...+||+++|+++ | . ++++++++|++|+.+++.+++++||+|++++|+|.+... .+...|+++..
T Consensus 68 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~----~~~~~g~~~~~ 143 (391)
T PRK08361 68 PNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVE----DAKIAEAKPIR 143 (391)
T ss_pred CCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH----HHHHcCCEEEE
Confidence 3456778999999986 3 2 355666666799999999999999999999999988653 33445777766
Q ss_pred eCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc----c--
Q 009167 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A-- 343 (541)
Q Consensus 280 vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~----~-- 343 (541)
++. .|++++++.+++ ++++|++++|+||||.++| +++|+++|+++++++|+||+|....... +
T Consensus 144 v~~~~~~~~~~d~~~l~~~i~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 222 (391)
T PRK08361 144 IPLREENEFQPDPDELLELITK-RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMI 222 (391)
T ss_pred EecCCccCCCCCHHHHHHhccc-ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHh
Confidence 642 478999999987 4999999999999999999 7889999999999999999987543211 1
Q ss_pred -cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH------HHHHHHHHHHHH
Q 009167 344 -LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNST 416 (541)
Q Consensus 344 -~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~------tl~~r~~~~~~~ 416 (541)
.....++++.|+||.+|.+| ...|++++++++++.+...........+.....++...++ .+....++..++
T Consensus 223 ~~~~~~~i~~~s~SK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 301 (391)
T PRK08361 223 KYAPDNTILANSFSKTFAMTG-WRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNER 301 (391)
T ss_pred hcCCCCEEEEecCchhcCCcH-hhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHH
Confidence 12245789999999998665 4579999999998888765543333444444444333332 133333444566
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCcccccccC
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~p 495 (541)
.+.+.+.|++.+.+. +..|. .|.++|+.++.......+|.+.| +..++.+..|..+..
T Consensus 302 ~~~~~~~L~~~~~~~-~~~p~----------------g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~---- 360 (391)
T PRK08361 302 RKLVLKRLKEMPHIK-VFEPK----------------GAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGK---- 360 (391)
T ss_pred HHHHHHHHHhCCCCe-ecCCC----------------EEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCC----
Confidence 677788888765542 32221 34468888863111234555554 345777776644310
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009167 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
..++++||+++.
T Consensus 361 -----------------~~~~~iRi~~~~ 372 (391)
T PRK08361 361 -----------------AGEGYIRISYAT 372 (391)
T ss_pred -----------------CCCCEEEEEecC
Confidence 124789999996
No 89
>PRK07682 hypothetical protein; Validated
Probab=99.93 E-value=1.3e-23 Score=221.90 Aligned_cols=286 Identities=11% Similarity=0.136 Sum_probs=190.1
Q ss_pred chhHHHHHHHHHHHhC----C----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEE
Q 009167 209 NPTTVVVEEKMSALEG----A----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g----~----e-~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
.+...+||+++|++++ . + +++++++|++|+.+++.+++++||+|++++|+|+.....+ +..|.++..
T Consensus 56 ~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~ 131 (378)
T PRK07682 56 NAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLV----TLAGGVPVP 131 (378)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHH----HHcCCEEEE
Confidence 4567788999998874 2 2 3555555569999999999999999999999998754333 334555555
Q ss_pred eCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc------c
Q 009167 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK------A 343 (541)
Q Consensus 280 vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~------~ 343 (541)
++. .|++++++++.+ ++++|++++|+||||.+++ +++|+++|++|++++|+||+|....... .
T Consensus 132 ~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 210 (378)
T PRK07682 132 VATTLENEFKVQPAQIEAAITA-KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFAS 210 (378)
T ss_pred eecCCccCCCCCHHHHHhhcCc-ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhh
Confidence 532 378999999877 4999999999999999987 7789999999999999999987543211 1
Q ss_pred c-c-cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----HHHHHHHHHHHH
Q 009167 344 L-S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTA 417 (541)
Q Consensus 344 ~-~-~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~a 417 (541)
+ . ....+++.|+||.++.+| ...|++++++++++.+...........+...+..+.+.++. +....+...+++
T Consensus 211 ~~~~~~~~i~~~S~SK~~~~~G-lR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 289 (378)
T PRK07682 211 IKGMRERTILISGFSKGFAMTG-WRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRR 289 (378)
T ss_pred cccccCCEEEEecCcccccChh-hhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 1 1 134689999999998554 45799999999999887665433334444444444444432 333344455667
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCcccccccCc
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa 496 (541)
..+.+.|+++ ++ .+..|. .|.++|+.++........|.+.+ +..++.+..|..+..
T Consensus 290 ~~~~~~L~~~-~~-~~~~p~----------------g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~----- 346 (378)
T PRK07682 290 NFFVTSFNEI-GL-TCHVPG----------------GAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGE----- 346 (378)
T ss_pred HHHHHHHHHC-CC-ccCCCC----------------eeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCc-----
Confidence 7778888775 22 121121 34466777742112345566554 355787777754310
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009167 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~ 539 (541)
-.++++|||++.+ +.++.++.|.++++
T Consensus 347 ----------------~~~~~iRis~~~~~~~l~~~l~~l~~~l~ 375 (378)
T PRK07682 347 ----------------SGEGFIRCSYATSLEQLQEAMKRMKRFVE 375 (378)
T ss_pred ----------------CCCCeEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 0257899999973 22334455555544
No 90
>PLN02187 rooty/superroot1
Probab=99.93 E-value=5.9e-23 Score=222.53 Aligned_cols=287 Identities=15% Similarity=0.141 Sum_probs=187.0
Q ss_pred CchhHHHHHHHHHHHhC------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEE
Q 009167 208 GNPTTVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g------~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
+......||++||++++ . +++++++++++|+.+++.++++|||+|++++|+|+.... .+...|+++..
T Consensus 106 ~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~----~~~~~g~~~~~ 181 (462)
T PLN02187 106 PGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDA----RAAYSGLEVRK 181 (462)
T ss_pred CCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHH----HHHHcCCEEEE
Confidence 34557789999999873 1 344455455699999999999999999999999998542 34456777776
Q ss_pred eCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc----cc-
Q 009167 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL- 344 (541)
Q Consensus 280 vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~----~~- 344 (541)
++. .|+++|++++++ ++++|++++|+||||.+++ +++|+++|+++|++||+||+|....... +.
T Consensus 182 ~~l~~~~~~~~d~~~l~~~~~~-~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~ 260 (462)
T PLN02187 182 FDLLPEKEWEIDLEGIEAIADE-NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMG 260 (462)
T ss_pred EeCccccCCccCHHHHHHhcCC-CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHH
Confidence 643 278999998877 4899999999999999998 6788889999999999999987643211 11
Q ss_pred cc---CCcEEEECCccccCCCCCceEEEEEeC-hH----HHHHHHHHhhhcCC--CchHHHHHHHHHhHH-----HHHHH
Q 009167 345 SL---GADLVLHSATKFIGGHNDVLAGSISGS-GK----LVTQIRNLHHVLGG--ALNPNAAYLIIRGMK-----TLHLR 409 (541)
Q Consensus 345 ~~---gaDivv~S~sK~lgg~gd~~gG~lv~~-~~----li~~l~~~~~~~G~--~~s~~~a~l~l~~l~-----tl~~r 409 (541)
.+ ...+++.|+||.|+.+| .+.||++++ ++ +++.+......++. ..+.....++...++ .+...
T Consensus 261 ~~~~~~~vi~l~SfSK~f~~pG-lRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~ 339 (462)
T PLN02187 261 KFASIVPVLTLAGISKGWVVPG-WKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKK 339 (462)
T ss_pred HhccCCcEEEEecchhhcCCcc-ceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHH
Confidence 11 12588899999998777 568888873 32 23455544443332 223444333333332 23444
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC----CHHHHHHHH-HHccCcCeecc
Q 009167 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DLTATIKFI-DALKIPYIAPS 484 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~----~~~~~~~~l-~~L~~~~iavS 484 (541)
.+...++++.+.+.|++++.+..+..|. .|.++++.++. +......++ ..++..++.+.
T Consensus 340 ~~~l~~~r~~l~~~L~~~~~~~~~~~P~----------------gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~ 403 (462)
T PLN02187 340 NKILKHNVDLVCDRLKDIPCVVCPKKPE----------------SCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFL 403 (462)
T ss_pred HHHHHHHHHHHHHHHhhCCCCcCCCCCC----------------EeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEE
Confidence 4555667778888888765432111221 46677887742 110122333 33355677777
Q ss_pred cCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC--HHHHHHHHHHHHh
Q 009167 485 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED--FEDLKADVLQALH 539 (541)
Q Consensus 485 ~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~--~edli~dL~~AL~ 539 (541)
.|..+ | .+++|||+++... .++-++.|.+.++
T Consensus 404 pG~~f----------------------g-~~~~iRis~~~~~e~l~~al~rL~~~l~ 437 (462)
T PLN02187 404 PGDAL----------------------G-LKNWMRITIGVEAHMLEDALERLKGFCT 437 (462)
T ss_pred Ccccc----------------------C-CCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 77543 1 1578999999742 2344455555443
No 91
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.92 E-value=1.5e-23 Score=218.48 Aligned_cols=280 Identities=17% Similarity=0.255 Sum_probs=196.3
Q ss_pred CCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 205 GRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+.+...++|+.+|++++.+ +.++++++++++..++.+++++||+|++++|+|+... ..++..|+++..++.
T Consensus 49 ~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~ 124 (346)
T TIGR01141 49 HRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYE----ISAKIHGAEVVKVPL 124 (346)
T ss_pred hcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEecc
Confidence 4566677789999999999863 4454455558999999999999999999999986532 334556888877763
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC--CCEEEEeCCCCCCCcc-cc---c-ccCCcE
Q 009167 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-KA---L-SLGADL 350 (541)
Q Consensus 283 -----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~--gi~lIvDea~a~~~~~-~~---~-~~gaDi 350 (541)
.|++++++++.+ ++++|++++|+||||.++|++++.++|+.+ |+++|+|++|...... .+ . ....++
T Consensus 125 ~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i 203 (346)
T TIGR01141 125 DEDGQLDLEDILVAIDD-KPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLI 203 (346)
T ss_pred CCCCCCCHHHHHHhcCC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEE
Confidence 478999988876 499999999999999999999999998877 9999999998743221 11 1 123458
Q ss_pred EEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhC
Q 009167 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 351 vv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
++.|+||+++.+| ...|+++++++++++++.....++ .++.....+...++ .+....++..+++..+.+.|+++
T Consensus 204 ~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 280 (346)
T TIGR01141 204 VLRTLSKAFGLAG-LRIGYAIANAEIIDALNKVRAPFN--LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL 280 (346)
T ss_pred EEehhhHhhhchh-hhceeeecCHHHHHHHHhccCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8899999997655 457999999999888876554333 23333333333332 23344455667778888888877
Q ss_pred CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHH
Q 009167 428 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 507 (541)
Q Consensus 428 p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~ 507 (541)
+++. + .|. .|.+++|++++ ..+++.+.|...++.+..|..+.
T Consensus 281 ~g~~-~-~~~----------------~g~~~~~~~~~---~~~~~~~~L~~~gI~v~~g~~f~----------------- 322 (346)
T TIGR01141 281 PGLE-V-YPS----------------DANFVLIRFPR---DADALFEALLEKGIIVRDLNSYP----------------- 322 (346)
T ss_pred CCCE-E-CCC----------------cCCEEEEecCC---CHHHHHHHHHHCCeEEEeCCCcC-----------------
Confidence 6553 2 221 36789999874 34566666766677777664321
Q ss_pred HHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 508 RLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 508 ~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
+. ++.+|+|++. ++.++.+.++|
T Consensus 323 ----~~-~~~iRls~~~---~~~i~~~~~~l 345 (346)
T TIGR01141 323 ----GL-PNCLRITVGT---REENDRFLAAL 345 (346)
T ss_pred ----CC-CCeEEEecCC---HHHHHHHHHHh
Confidence 12 5789999982 34455665554
No 92
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.92 E-value=3.9e-23 Score=218.89 Aligned_cols=285 Identities=13% Similarity=0.143 Sum_probs=188.5
Q ss_pred CCCCchh-HHHHHHHHHHHh----C--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 205 GRYGNPT-TVVVEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 205 ~R~~~p~-~~~Le~~LA~l~----g--~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
.+|+++. ..+||++||+++ | . ++.++++++++|+..++.+++++||+|+++.|+|......+ ...|.
T Consensus 60 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~----~~~g~ 135 (384)
T PRK06348 60 TRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQI----EMVGG 135 (384)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHH----HHcCC
Confidence 4455553 467899999876 2 2 34555555569999999999999999999999998866444 33465
Q ss_pred EEEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc---
Q 009167 276 TATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK--- 342 (541)
Q Consensus 276 ~v~~vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~--- 342 (541)
++..++. .|+++|++++++ ++++|++++|+||||.+++ +++|.++|+++|++||+||+|.......
T Consensus 136 ~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 214 (384)
T PRK06348 136 KPIILETYEEDGFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV 214 (384)
T ss_pred EEEEecCCcCcCCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCcc
Confidence 6555532 378999998876 4899999999999999997 5688888999999999999987643211
Q ss_pred c---cc--cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----HHHHHHHH
Q 009167 343 A---LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQ 413 (541)
Q Consensus 343 ~---~~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~ 413 (541)
+ +. .+..+++.|+||.++.+| ++.|++++++++++.+...........+......+...+.. +....+..
T Consensus 215 ~~~~~~~~~~~vi~~~SfSK~~~l~G-lRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 293 (384)
T PRK06348 215 PMATLAGMPERTITFGSFSKDFAMTG-WRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEF 293 (384)
T ss_pred chhhcCCCcCcEEEEecchhccCCcc-ccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 1 11 234688999999998555 46899999999988887766544444455444444333322 22222333
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCccccc
Q 009167 414 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIV 492 (541)
Q Consensus 414 ~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~sl~ 492 (541)
.++++.+.+.|++.+.+ .+..|. .|.++|++++........|.+.+ +..++.+..|..+..
T Consensus 294 ~~r~~~~~~~L~~~~~~-~~~~p~----------------gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~- 355 (384)
T PRK06348 294 QKRLEYAYKRIESIPNL-SLHPPK----------------GSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGE- 355 (384)
T ss_pred HHHHHHHHHHHhcCCCc-eeccCC----------------eeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhcc-
Confidence 45556677777765443 222221 24467888863111234555554 345777777755321
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009167 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL 534 (541)
..++.|||+++. +.+++.+.+
T Consensus 356 --------------------~~~~~iRi~~~~-~~~~l~~al 376 (384)
T PRK06348 356 --------------------SGEGYIRLACTV-GIEVLEEAF 376 (384)
T ss_pred --------------------CCCCeEEEEecC-CHHHHHHHH
Confidence 124789999985 555544444
No 93
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.92 E-value=4.3e-23 Score=215.85 Aligned_cols=279 Identities=17% Similarity=0.181 Sum_probs=189.9
Q ss_pred CCCCch-hHHHHHHHHHHHh----CC---Cc-EEEeCCHH-HHHHHHHHHhccCC---CEEEEcCCCCcchHHHHHhhcc
Q 009167 205 GRYGNP-TTVVVEEKMSALE----GA---ES-TVIMASGM-SASTVMLLALVPAG---GHIVTTTDCYRKTRIFIETVLP 271 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~----g~---e~-~i~~sSGs-~Ai~~al~all~pG---d~Vlv~~~~y~~~~~~~~~~l~ 271 (541)
.+|+.+ ....||+.+++++ |. .+ .|++++|+ +++..++.+++++| |+|++++|+|...... ++
T Consensus 30 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~----~~ 105 (350)
T TIGR03537 30 SQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERG----AL 105 (350)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHH----HH
Confidence 345554 3568888888876 52 22 56666665 89999999999887 6999999999986543 44
Q ss_pred cCCeEEEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc
Q 009167 272 KMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ 341 (541)
Q Consensus 272 ~~Gi~v~~vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~ 341 (541)
..|+++..++. .|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+.....
T Consensus 106 ~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~ 184 (350)
T TIGR03537 106 FAGGEPTAVKLKKEDGFLLRLEKVEKSILE-ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFG 184 (350)
T ss_pred hcCCEEEEcccCcccCCccCHHHHHHhhhh-ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccC
Confidence 56788777653 278999998877 4999999999999999999 778999999999999999998754221
Q ss_pred cc----c--ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHHHHHH
Q 009167 342 KA----L--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQ 412 (541)
Q Consensus 342 ~~----~--~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~r~~~ 412 (541)
.. . .....+++.|+||.+|.+| ...|++++++++++.++.....++...+.....++...+ +.+..+.++
T Consensus 185 ~~~~~~~~~~~~~~i~~~s~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~ 263 (350)
T TIGR03537 185 EPPHSALEVGIENVLAFHSLSKRSGMTG-YRSGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKI 263 (350)
T ss_pred CCCCchhhcCcCCEEEEeecccccCCcc-ccceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHH
Confidence 11 1 2234588999999997665 457899999999988887665555444433333332222 223333444
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCccccc
Q 009167 413 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 492 (541)
Q Consensus 413 ~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~ 492 (541)
..++...+.+.|+++ ++ .+..|. .|.++|+.++.. ....++.+.|...++.+..|..+..
T Consensus 264 l~~~~~~~~~~l~~~-g~-~~~~~~----------------g~~~~~~~~~~~-~~~~~l~~~L~~~gv~v~~g~~f~~- 323 (350)
T TIGR03537 264 FKRKRDLFIEFFNKV-GL-EYLYPD----------------ATFYLWVKVPSG-IDAKDYALRLLENGIVVAPGENFGS- 323 (350)
T ss_pred HHHHHHHHHHHHHHC-CC-cccCCC----------------eEEEEEEECCCC-CCHHHHHHHHHHCCEEEcCchhhCC-
Confidence 556666777777765 22 122221 344688988743 2345667776666777766644310
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009167 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 530 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edl 530 (541)
..++++||+++ .+.+++
T Consensus 324 --------------------~~~~~~Ri~~~-~~~~~~ 340 (350)
T TIGR03537 324 --------------------GEEGYVRVALV-PTLEEC 340 (350)
T ss_pred --------------------CCCCEEEEEec-CCHHHH
Confidence 02478999997 344443
No 94
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.92 E-value=7.5e-23 Score=215.95 Aligned_cols=274 Identities=18% Similarity=0.205 Sum_probs=184.4
Q ss_pred hHHHHHHHHHHHh----C--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 211 TTVVVEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g--~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...+||+.+|+++ | . ++.+++++|++++.+++..++++||+|++++|+|..... .++..|+++..++.
T Consensus 62 G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~v~~ 137 (382)
T PRK06108 62 GIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVA----APKILGARVVCVPL 137 (382)
T ss_pred CCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHH----HHHHCCCEEEEeeC
Confidence 3456777777654 5 2 345555666799999999999999999999999987543 34556787777653
Q ss_pred --------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc------ccc-
Q 009167 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ------KAL- 344 (541)
Q Consensus 283 --------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~------~~~- 344 (541)
.|+++|++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... ...
T Consensus 138 ~~~~~~~~~d~~~l~~~~~~-~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 216 (382)
T PRK06108 138 DFGGGGWTLDLDRLLAAITP-RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLD 216 (382)
T ss_pred CCCCCCccCCHHHHHHhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhh
Confidence 368999998876 4999999999999999986 568889999999999999997654321 001
Q ss_pred --c-cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHH
Q 009167 345 --S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (541)
Q Consensus 345 --~-~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a 417 (541)
. ....+++.|+||.++.+| ...|++++++++++.+...........+...+.++...++ .+....++..++.
T Consensus 217 ~~~~~~~~i~~~S~SK~~g~~G-~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 295 (382)
T PRK06108 217 IAEPDDRIIFVNSFSKNWAMTG-WRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSR 295 (382)
T ss_pred cCCCcCCEEEEeechhhccCcc-cceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 1 134588999999997555 4579999999999888765543333344444333333332 2333344455666
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCcccccccCc
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa 496 (541)
+.+.+.|++.+.+. +..|. .|.++++.+++. .....|.+.| +..++.+..|..+. +
T Consensus 296 ~~l~~~L~~~~~~~-~~~p~----------------~g~~~~~~l~~~-~~~~~~~~~ll~~~gV~v~pg~~f~----~- 352 (382)
T PRK06108 296 DHLVDALRALPGVE-VAKPD----------------GAMYAFFRIPGV-TDSLALAKRLVDEAGLGLAPGTAFG----P- 352 (382)
T ss_pred HHHHHHHHhCCCCc-ccCCC----------------eeEEEEEeCCCC-CCHHHHHHHHHHhCCEEEeCchhhC----C-
Confidence 77778887665432 11111 345678888642 1334565554 44577776664321 0
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009167 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 530 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edl 530 (541)
..++++|||++. +.+++
T Consensus 353 ----------------~~~~~~Ris~~~-~~~~l 369 (382)
T PRK06108 353 ----------------GGEGFLRWCFAR-DPARL 369 (382)
T ss_pred ----------------CCCCEEEEEecC-CHHHH
Confidence 125789999998 54443
No 95
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.4e-23 Score=219.91 Aligned_cols=278 Identities=15% Similarity=0.197 Sum_probs=190.2
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+.+...++++++|++++.+ +.|++++| ++++..++.+++++||+|++++|+|+.... .+...|.++..++.
T Consensus 59 ~~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~----~~~~~g~~~~~~~~ 134 (359)
T PRK03158 59 ALYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRH----NAIIEGAEVREVPL 134 (359)
T ss_pred hcCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHH----HHHHcCCeEEEEec
Confidence 3456667889999999999863 44555555 589999999999999999999999987543 23345777776653
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHh--CCCEEEEeCCCCCCCcc----ccc----ccCC
Q 009167 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----SLGA 348 (541)
Q Consensus 283 ----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~--~gi~lIvDea~a~~~~~----~~~----~~ga 348 (541)
.|++++++++++ ++++|++++|+||||.+++.++|.++++. +|+++|+||+|...... ... ..+.
T Consensus 135 ~~~~~d~~~l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 213 (359)
T PRK03158 135 KDGGHDLEAMLKAIDE-QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYEN 213 (359)
T ss_pred CCCCcCHHHHHHhcCC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCC
Confidence 378999988876 59999999999999999999998888876 59999999998653321 111 2345
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILE 425 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~ 425 (541)
.+++.|+||.+|.+| +..|++++++++++.+......++ .+.....++...++. +....+...++.+.+.+.|+
T Consensus 214 vi~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 290 (359)
T PRK03158 214 LIVLRTFSKAYGLAA-LRVGYGIASEELIEKLNIARPPFN--TTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCK 290 (359)
T ss_pred EEEEEechHhhcCcc-hhhehhcCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999998665 457999999999998877654333 344444444444432 22223333455566667776
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCH
Q 009167 426 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 505 (541)
Q Consensus 426 ~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~ 505 (541)
++ .+. + +|. .|+++++.++.+ ...+.+.|...++.+..|..+
T Consensus 291 ~~-~~~-~-~~~----------------~g~~i~~~~~~~---~~~~~~~l~~~gv~v~~g~~f---------------- 332 (359)
T PRK03158 291 EY-GLF-Y-YPS----------------QTNFIFVDTGRD---ANELFEALLKKGYIVRSGAAL---------------- 332 (359)
T ss_pred HC-CCe-e-CCC----------------cCcEEEEECCCC---HHHHHHHHHHCCeEEeeCCCC----------------
Confidence 65 221 1 222 466888887422 345556665567777776432
Q ss_pred HHHHhcCCCCCeEEEEecCC-CHHHHHHHHH
Q 009167 506 SERLKYGIMDNLVRFSFGVE-DFEDLKADVL 535 (541)
Q Consensus 506 ~~~~~~gi~~~~IRlSvG~e-~~edli~dL~ 535 (541)
+ .+++|||+++.. +.+.+++.|+
T Consensus 333 ------~-~~~~iRi~~~~~~~~~~l~~al~ 356 (359)
T PRK03158 333 ------G-FPTGVRITIGLKEQNDKIIELLK 356 (359)
T ss_pred ------C-CCCeEEEecCCHHHHHHHHHHHH
Confidence 1 146899999953 2344444443
No 96
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=1e-23 Score=221.54 Aligned_cols=285 Identities=14% Similarity=0.224 Sum_probs=194.4
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
+.+|+.+...+||+.+|+++|.+ +.|++++|+ +++..++.+++++||+|++++|+|..... .....|+++..++
T Consensus 61 ~~~y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~~~ 136 (367)
T PRK02731 61 LHRYPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPI----AAQAVGAKPVEVP 136 (367)
T ss_pred hcCCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHH----HHHHcCCeEEEec
Confidence 45666666789999999999874 456677766 78888888999999999999999965432 2345688887776
Q ss_pred C----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC--CCEEEEeCCCCCCCcc-------cccc-cC
Q 009167 282 P----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-------KALS-LG 347 (541)
Q Consensus 282 ~----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~--gi~lIvDea~a~~~~~-------~~~~-~g 347 (541)
. .|++++++++++ ++++|++++|+||||.+++.++|.++++.+ |+++|+|++|...... ...+ ..
T Consensus 137 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 215 (367)
T PRK02731 137 AKDYGHDLDAMLAAVTP-RTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFP 215 (367)
T ss_pred ccCCCCCHHHHHHHhCC-CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcC
Confidence 4 378999999976 599999999999999999999999998874 8999999997643321 1111 12
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKIL 424 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L 424 (541)
..+++.|+||.+|.+| ...|++++++++++.+......++ .+....+.+...++. +....+...++...+.+.|
T Consensus 216 ~~i~~~S~SK~~g~~G-~RiG~l~~~~~~~~~l~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L 292 (367)
T PRK02731 216 NVVVTRTFSKAYGLAG-LRVGYGIAPPEIIDALNRVRQPFN--VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFL 292 (367)
T ss_pred CEEEEeeehHhhcCcc-cceeeeeCCHHHHHHHHHccCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578899999997555 457999999999988876554333 234444444444432 2222333345556667777
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCC
Q 009167 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 504 (541)
Q Consensus 425 ~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~ 504 (541)
+++ ++. + +|. .|+++|+.++.. ....+|.+.|...++.+..|..+
T Consensus 293 ~~~-g~~-~-~~~----------------~g~~~~i~~~~~-~~~~~~~~~L~~~gI~v~~~~~~--------------- 337 (367)
T PRK02731 293 AEL-GLE-Y-IPS----------------VGNFILVDFDDG-KDAAEAYQALLKRGVIVRPVAGY--------------- 337 (367)
T ss_pred HHC-CCc-c-CCC----------------CceEEEEECCCC-CCHHHHHHHHHHCCEEEEeCCCC---------------
Confidence 765 221 1 121 467899998532 23556677776667777665321
Q ss_pred HHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009167 505 QSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALH 539 (541)
Q Consensus 505 ~~~~~~~gi~~~~IRlSvG~e-~~edli~dL~~AL~ 539 (541)
+ .+++||||++.. +.+.+++.|.+.++
T Consensus 338 -------~-~~~~iRis~~~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 338 -------G-LPNALRITIGTEEENRRFLAALKEFLA 365 (367)
T ss_pred -------C-CCCeEEEecCCHHHHHHHHHHHHHHHh
Confidence 1 146899999842 34445555555443
No 97
>PRK08068 transaminase; Reviewed
Probab=99.92 E-value=4.8e-23 Score=218.49 Aligned_cols=284 Identities=15% Similarity=0.095 Sum_probs=188.5
Q ss_pred cCCCC-chhHHHHHHHHHHHh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009167 204 YGRYG-NPTTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 204 Y~R~~-~p~~~~Le~~LA~l~----g~----e-~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
+.+|+ .+...+||+++|+++ |. + +.+++++|++++..++.+++++||+|++++|+|..... .++..
T Consensus 63 ~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~----~~~~~ 138 (389)
T PRK08068 63 NHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLS----GVALA 138 (389)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH----HHHhc
Confidence 34553 455778999999986 42 2 34455555699999999999999999999999987553 34456
Q ss_pred CeEEEEeCCC-------CHHHHHHhccCCCceEEEEeCCCCCCCccccH---HHHHHHHHhCCCEEEEeCCCCCCCcc--
Q 009167 274 GITATVIDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (541)
Q Consensus 274 Gi~v~~vd~~-------d~e~Le~al~~~~tklV~lesP~NPtG~i~dl---~~Ia~la~~~gi~lIvDea~a~~~~~-- 341 (541)
|+++..++.+ |++++++++++ ++++|++++||||||.+++. ++|+++|+++++++|+||+|......
T Consensus 139 g~~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~ 217 (389)
T PRK08068 139 RAQFETMPLIAENNFLPDYTKIPEEVAE-KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQ 217 (389)
T ss_pred CCEEEEeecccccCCCCCHHHHHHhccc-cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCC
Confidence 7777666532 57889888876 49999999999999999996 47778899999999999998642211
Q ss_pred c--c-cc----cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH----HHHHHHH
Q 009167 342 K--A-LS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRV 410 (541)
Q Consensus 342 ~--~-~~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l----~tl~~r~ 410 (541)
. . .. ....+++.|+||.+|.+| .+.|++++++++++.+......+....++..+..+...+ +.+....
T Consensus 218 ~~~s~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 296 (389)
T PRK08068 218 KPVSFLQTPGAKDVGIELYTLSKTFNMAG-WRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELV 296 (389)
T ss_pred CCcChhhCCCccCCEEEEecchhccCCcc-ceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHH
Confidence 1 1 11 124589999999997655 568999999999998887665544443332222222222 2334444
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccC-cCeecccCCcc
Q 009167 411 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCE 489 (541)
Q Consensus 411 ~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~-~~iavS~G~~~ 489 (541)
++..++++.+.+.|+++. + .+..|. .|.++|+.+++. .....|.+.|.. .++.+..|..+
T Consensus 297 ~~~~~~r~~~~~~L~~~g-~-~~~~~~----------------g~~~~~v~~~~~-~~~~~~~~~l~~~~gi~v~pg~~f 357 (389)
T PRK08068 297 ARYESRRNAFISACREIG-W-EVDAPK----------------GSFFAWMPVPKG-YTSEQFADLLLEKAHVAVAPGNGF 357 (389)
T ss_pred HHHHHHHHHHHHHHHHCC-C-cccCCC----------------eeEEEEEECCCC-CCHHHHHHHHHHhCCEEEecchHh
Confidence 555566777778887652 2 122111 234579998743 234556666543 57777666432
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009167 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL 534 (541)
.. ..+++|||+++.. .+.+.+.+
T Consensus 358 ~~---------------------~~~~~iRi~~~~~-~~~l~~al 380 (389)
T PRK08068 358 GE---------------------HGEGYVRVGLLTD-EERLREAV 380 (389)
T ss_pred Cc---------------------cCCCeEEEEEcCC-HHHHHHHH
Confidence 10 1257899999864 34433333
No 98
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.92 E-value=6.2e-23 Score=217.50 Aligned_cols=274 Identities=15% Similarity=0.119 Sum_probs=181.9
Q ss_pred hhHHHHHHHHHHHh----C--C-Cc-EEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 210 PTTVVVEEKMSALE----G--A-ES-TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g--~-e~-~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
....+||++||+++ | . .+ .|++++|+ +++.+++.+++.+||+|++++|+|..... .++..|.++..+
T Consensus 68 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v 143 (388)
T PRK07366 68 HGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAG----GVYLAGGQIYPM 143 (388)
T ss_pred CCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH----HHHhcCCEEEEE
Confidence 44667889999877 4 2 23 57766665 89999999999999999999999988653 344467777766
Q ss_pred CCC-------CHHHHHHhccCCCceEEEEeCCCCCCCccccHH---HHHHHHHhCCCEEEEeCCCCCCCcc------ccc
Q 009167 281 DPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQ------KAL 344 (541)
Q Consensus 281 d~~-------d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~---~Ia~la~~~gi~lIvDea~a~~~~~------~~~ 344 (541)
+.+ |++++++.+.+ ++++|++++||||||.+++.+ +|+++|+++|++||+||+|...... ...
T Consensus 144 ~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 222 (388)
T PRK07366 144 PLRAENDFLPVFADIPTEVLA-QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSIL 222 (388)
T ss_pred ECCCccCCCCCHHHHHHhhcc-cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChh
Confidence 432 56777777765 489999999999999999854 6777899999999999998754321 111
Q ss_pred cc----CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc-hHHHHHHHHHhH----HHHHHHHHHHHH
Q 009167 345 SL----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL-NPNAAYLIIRGM----KTLHLRVQQQNS 415 (541)
Q Consensus 345 ~~----gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~-s~~~a~l~l~~l----~tl~~r~~~~~~ 415 (541)
.. ...+++.|+||.+|.+| ...||+++++++++.+.......+... +..... +...+ +.+....+...+
T Consensus 223 ~~~~~~~~vi~~~SfSK~~g~~G-lRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~-a~~~l~~~~~~l~~~~~~~~~ 300 (388)
T PRK07366 223 QADPEKSVSIEFFTLSKSYNMGG-FRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNG-AIAALTGPQATVQQTVQIFRQ 300 (388)
T ss_pred hCCCCcccEEEEeecccccCCcc-hhheehcCCHHHHHHHHHHHhhcccCCCHHHHHH-HHHHHhCcHHHHHHHHHHHHH
Confidence 11 12478899999997665 468999999999998887665444322 221111 11222 223333444556
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-HHHHHHHHHc-cCcCeecccCCcccccc
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDAL-KIPYIAPSFGGCESIVD 493 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-~~~~~~l~~L-~~~~iavS~G~~~sl~~ 493 (541)
++..+.+.|+++. + .+..|. .|.++|+.+++.. ....+|.+.+ +..++.+..|..+..
T Consensus 301 ~r~~l~~~L~~~~-~-~~~~p~----------------~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~-- 360 (388)
T PRK07366 301 RRDAFINALHQIG-W-PVPLPE----------------ATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGK-- 360 (388)
T ss_pred HHHHHHHHHHHCC-C-cccCCC----------------eeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCc--
Confidence 6677778887652 2 122231 5778899987421 1234555554 455777777654310
Q ss_pred cCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009167 494 QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 530 (541)
Q Consensus 494 ~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edl 530 (541)
...++|||+++. +.+++
T Consensus 361 -------------------~~~~~iRi~~~~-~~~~l 377 (388)
T PRK07366 361 -------------------SGEGYVRFALVH-DPDIL 377 (388)
T ss_pred -------------------CCCCeEEEEecC-CHHHH
Confidence 124789999985 44443
No 99
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.92 E-value=5.3e-23 Score=218.60 Aligned_cols=285 Identities=13% Similarity=0.104 Sum_probs=186.0
Q ss_pred CCCch-hHHHHHHHHHHHh----CC----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 206 RYGNP-TTVVVEEKMSALE----GA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 206 R~~~p-~~~~Le~~LA~l~----g~----e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
+|+++ ...+||+++|+++ |. ++.+++++| ++++..++.+++++||+|++++|+|+.....+ ...|+
T Consensus 68 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~----~~~g~ 143 (394)
T PRK05942 68 GYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGP----LIAGA 143 (394)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCC
Confidence 34443 3568888888876 42 234555555 59999999999999999999999998865333 34577
Q ss_pred EEEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----
Q 009167 276 TATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 276 ~v~~vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~---- 341 (541)
++..++. .|++++++.+.+ ++++|++++|+||||.+++ +++|.++|+++|++||+||+|......
T Consensus 144 ~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~ 222 (394)
T PRK05942 144 QIYPIILKPENDWLIDLSSIPEEVAQ-QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQP 222 (394)
T ss_pred EEEEeecCCccCCccCHHHHHHhccc-cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCC
Confidence 7766643 368899988876 5999999999999999998 678888999999999999997643211
Q ss_pred cc---cc--cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----HHHHHHH
Q 009167 342 KA---LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQ 412 (541)
Q Consensus 342 ~~---~~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~ 412 (541)
.+ .. .+..+++.|+||.++.+| +..|++++++++++.++......+...+...+.++...++. +....++
T Consensus 223 ~~~~~~~~~~~~~i~~~SfSK~~~~~G-lRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 301 (394)
T PRK05942 223 TSLLEIPGAKDIGVEFHTLSKTYNMAG-WRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQER 301 (394)
T ss_pred CChhhCCCccccEEEEecchhccCChh-hheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 01 11 124578899999997555 45799999999999988766543333343333333333332 2222333
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHH-HccCcCeecccCCcccc
Q 009167 413 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID-ALKIPYIAPSFGGCESI 491 (541)
Q Consensus 413 ~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~-~L~~~~iavS~G~~~sl 491 (541)
..++...+.+.|++. .+ .+.-|. .|.++|+.++... ...++.. .++..++.+..|..+..
T Consensus 302 ~~~~~~~~~~~L~~~-~~-~~~~~~----------------~~~f~~~~~~~~~-~~~~~~~~~l~~~gV~v~~g~~f~~ 362 (394)
T PRK05942 302 YRTRRDFLIQGLGEL-GW-NIPPTK----------------ATMYLWVPCPVGM-GSTDFALNVLQKTGVVVTPGNAFGE 362 (394)
T ss_pred HHHHHHHHHHHHHHC-CC-eecCCC----------------eeeEEEEECCCCC-CHHHHHHHHHHHCCEEEeCChhhCc
Confidence 445566667777654 22 121111 3447889987431 1223333 34445777766644310
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHH
Q 009167 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQA 537 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~A 537 (541)
..+++|||+++ .+.+.+.+.|++.
T Consensus 363 ---------------------~~~~~iRis~~-~~~~~l~~~l~~l 386 (394)
T PRK05942 363 ---------------------GGEGYVRISLI-ADCDRLGEALDRL 386 (394)
T ss_pred ---------------------CCCCeEEEEec-CCHHHHHHHHHHH
Confidence 12479999998 4455555555443
No 100
>PRK12414 putative aminotransferase; Provisional
Probab=99.92 E-value=1.2e-22 Score=215.15 Aligned_cols=279 Identities=14% Similarity=0.130 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHhCC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----
Q 009167 212 TVVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 212 ~~~Le~~LA~l~g~-----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
.+.+++.+++++|. ++++++++|++++..++.+++.+||+|+++.|+|...... ++..|.++..++.
T Consensus 72 r~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~~~ 147 (384)
T PRK12414 72 REALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPI----VRLQGATPVAIKLSPED 147 (384)
T ss_pred HHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHH----HHHcCCEEEEEecCccc
Confidence 34444445455675 2466676777999999999999999999999999875433 3335666666543
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----ccc-c----cCC
Q 009167 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-S----LGA 348 (541)
Q Consensus 283 --~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----~~~-~----~ga 348 (541)
.|+++|++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .++ . .+.
T Consensus 148 ~~~d~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 226 (384)
T PRK12414 148 FRVNWDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAER 226 (384)
T ss_pred cccCHHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCc
Confidence 378999999876 5999999999999999975 668888999999999999998653211 111 1 123
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILE 425 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~ 425 (541)
.+++.|+||.+|.+| .+.||+++++++++.+...........+...+.++...++. .....+...++++.+.+.|+
T Consensus 227 ~i~~~SfSK~~~~pG-lRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 305 (384)
T PRK12414 227 SVIVSSFGKSYHVTG-WRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELA 305 (384)
T ss_pred EEEEecccccccCcc-ceEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999997555 46899999999998887765433333333333333333321 12222344566677778887
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC--CHHHHHHHHHHccCcCeecccCCcccccccCccccccCC
Q 009167 426 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 503 (541)
Q Consensus 426 ~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~--~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~ 503 (541)
++. +. +..|. .|-++|+.++. +....+.+.+.++..++.+..|..+..
T Consensus 306 ~~g-~~-~~~~~----------------gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~------------ 355 (384)
T PRK12414 306 GSR-FE-LLPSE----------------GSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYT------------ 355 (384)
T ss_pred hCC-Ce-ecCCC----------------cceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcC------------
Confidence 752 22 22121 23456667653 111222222445556888877754421
Q ss_pred CHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009167 504 SQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 504 ~~~~~~~~gi~~~~IRlSvG~e~~edli~dL 534 (541)
.+..+++|||+++. +.+++.+.+
T Consensus 356 -------~~~~~~~iRis~~~-~~~~~~~~~ 378 (384)
T PRK12414 356 -------DGTDTGLIRLSFSK-DDATLVEGA 378 (384)
T ss_pred -------CCCCCCEEEEEecC-CHHHHHHHH
Confidence 01125789999997 444444443
No 101
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.92 E-value=5.4e-23 Score=217.67 Aligned_cols=283 Identities=16% Similarity=0.169 Sum_probs=186.0
Q ss_pred CCCCchh-HHHHHHHHHHHh----CC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009167 205 GRYGNPT-TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 205 ~R~~~p~-~~~Le~~LA~l~----g~----e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~G 274 (541)
.+|+.+. ..+|+++||+++ |. ++.|++++|+ +++..++..++++||+|++++|+|+.... .++..|
T Consensus 63 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~----~~~~~g 138 (385)
T PRK09276 63 HQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKI----GTIFAG 138 (385)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHH----HHHHcC
Confidence 3454443 578888888887 32 2346666665 99999999999999999999999987543 334457
Q ss_pred eEEEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCccccH---HHHHHHHHhCCCEEEEeCCCCCCCcc---
Q 009167 275 ITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (541)
Q Consensus 275 i~v~~vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl---~~Ia~la~~~gi~lIvDea~a~~~~~--- 341 (541)
.++..++. .|++++++.+.+ ++++|++++|+||||.+++. ++|+++|+++|++||+||+|......
T Consensus 139 ~~~~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 217 (385)
T PRK09276 139 GEPYFMPLKEENGFLPDLDAIPEDVAK-KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYK 217 (385)
T ss_pred CEEEEEecCCCCCCcCCHHHHHHhccc-cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCC
Confidence 77666542 267888888876 59999999999999999984 68888899999999999998753211
Q ss_pred --cc--cc--cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHH
Q 009167 342 --KA--LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQ 411 (541)
Q Consensus 342 --~~--~~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~ 411 (541)
.. +. .+..+++.|+||.+|.+| ...|++++++++++.++..........+......+...+. .+....+
T Consensus 218 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 296 (385)
T PRK09276 218 PPSFLEVPGAKDVGIEFHSLSKTYNMTG-WRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRK 296 (385)
T ss_pred CCChhccCCCcCCEEEEecchhhcCCcc-hhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHH
Confidence 11 11 234688999999998666 4578999999999988876554443344333333333332 2223333
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCccc
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCES 490 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~s 490 (541)
+..++++.+.+.|+++ .+ .+..|. .|.++++.+++. ....++.+.| +..++.+..|..+.
T Consensus 297 ~~~~~~~~l~~~L~~~-~~-~~~~~~----------------~~~~~~v~~~~~-~~~~~l~~~ll~~~gi~v~~g~~f~ 357 (385)
T PRK09276 297 IYQERRDILVEGLRKL-GL-EVEPPK----------------ATFYVWAPVPKG-YTSAEFATLLLDKAGVVVTPGNGFG 357 (385)
T ss_pred HHHHHHHHHHHHHHhC-CC-cccCCC----------------cceEEEEECCCC-CCHHHHHHHHHHhCCEEECCchhhC
Confidence 4445667777888765 22 122121 234578888643 1234555554 34577776664321
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009167 491 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 491 l~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL 534 (541)
. ..++++|||++. +.+++.+.|
T Consensus 358 ~---------------------~~~~~~Ris~~~-~~~~l~~~l 379 (385)
T PRK09276 358 E---------------------YGEGYFRIALTV-PDERIEEAV 379 (385)
T ss_pred C---------------------CCCCeEEEEeCC-CHHHHHHHH
Confidence 0 124689999995 444444333
No 102
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=2.1e-23 Score=218.67 Aligned_cols=283 Identities=14% Similarity=0.194 Sum_probs=187.4
Q ss_pred CCCCchhHHHHHHHHHHHhCCC--cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 205 GRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
.+|+.+...+||+.+|+++|.+ ..+++++|+ +++..++..++++||+|++++|+|.... ..++..|+++..++
T Consensus 64 ~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~~~ 139 (361)
T PRK00950 64 HRYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYE----ISAKAHGAKPVYAK 139 (361)
T ss_pred cCCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEee
Confidence 4566677799999999999873 344547886 7888888888999999999999987643 23455688877775
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc--cc--ccCCcEEE
Q 009167 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--AL--SLGADLVL 352 (541)
Q Consensus 282 ~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~--~~--~~gaDivv 352 (541)
. .|++++++++++ ++++|++++|+||||.++|.++|.++|+++|+++|+|++|....... .+ .....+++
T Consensus 140 ~~~~~~~~~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~ 218 (361)
T PRK00950 140 REEDFSLDVDSVLNAITE-KTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIG 218 (361)
T ss_pred cCCCCCcCHHHHHHHhcc-CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEE
Confidence 2 368899998876 48999999999999999999999999999999999999986543211 11 12334788
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Q 009167 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (541)
Q Consensus 353 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~ 432 (541)
.|+||.+|.+| +..|++++++++++.++.....++ ++......+...++.. ..+++..+..+...+.|.+.-.+ .
T Consensus 219 ~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~r~~l~~~l~~-~ 293 (361)
T PRK00950 219 RTFSKVFGLAG-LRIGYGFVPEWLIDYYMRAKTPFS--LTRLSQAAAIAALSDK-EYIEKSIEHGIKSREYLYNELPF-K 293 (361)
T ss_pred EeehHhhcCch-hhcchhcCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHhhcCe-e
Confidence 99999998655 457999999999888877654443 3344444444444321 11222222222333333221111 1
Q ss_pred EeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcC
Q 009167 433 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 512 (541)
Q Consensus 433 v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~g 512 (541)
+ +|. .|+++++.+++ ....+|.+.|...++.+..|..+. +
T Consensus 294 ~-~~~----------------~~~~i~~~~~~--~~~~~~~~~l~~~gv~v~~~~~f~---------------------~ 333 (361)
T PRK00950 294 V-YPS----------------EANFVLVDVTP--MTAKEFCEELLKRGVIVRDCTSFR---------------------G 333 (361)
T ss_pred E-CCC----------------cceEEEEECCC--CCHHHHHHHHHHCCEEEeeCCccC---------------------C
Confidence 1 221 46788998853 234566666655677776653210 1
Q ss_pred CCCCeEEEEecCC-CHHHHHHHHHHH
Q 009167 513 IMDNLVRFSFGVE-DFEDLKADVLQA 537 (541)
Q Consensus 513 i~~~~IRlSvG~e-~~edli~dL~~A 537 (541)
..+++||||++.+ +.+.+++.|++.
T Consensus 334 ~~~~~lRis~~~~~~~~~l~~~L~~i 359 (361)
T PRK00950 334 LGDYYIRVSIGTFEENERFLEILKEI 359 (361)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHHH
Confidence 1357899999942 234444444443
No 103
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.92 E-value=7.1e-23 Score=218.95 Aligned_cols=274 Identities=14% Similarity=0.144 Sum_probs=182.8
Q ss_pred CCCCch-hHHHHHHHHHHHhC------------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhh
Q 009167 205 GRYGNP-TTVVVEEKMSALEG------------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV 269 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~g------------~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~ 269 (541)
.+|+++ ...+||++||++++ . ++.++++++++++.+++.+++++||+|+++.|+|..... .
T Consensus 69 ~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~----~ 144 (412)
T PTZ00433 69 NGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET----V 144 (412)
T ss_pred CCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH----H
Confidence 456655 47789999999875 1 234444445699999999999999999999999988543 3
Q ss_pred cccCCeEEEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCC
Q 009167 270 LPKMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 270 l~~~Gi~v~~vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~ 339 (541)
++..|+++..++. .|+++|++++++ ++++|++++||||||.+++ +++|+++|+++|++||+||+|....
T Consensus 145 ~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 223 (412)
T PTZ00433 145 CKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMV 223 (412)
T ss_pred HHHcCCEEEEEecCccccCcCCHHHHHHHhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccc
Confidence 4556777776653 268999988877 4999999999999999987 6677888999999999999987543
Q ss_pred ccc----c-cc---cCCcEEEECCccccCCCCCceEEEEEe--C----hHHHHHHHHHhhhcCCCchHHHHHHHHHhHH-
Q 009167 340 NQK----A-LS---LGADLVLHSATKFIGGHNDVLAGSISG--S----GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK- 404 (541)
Q Consensus 340 ~~~----~-~~---~gaDivv~S~sK~lgg~gd~~gG~lv~--~----~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~- 404 (541)
... . .. ....+++.|+||.++.+| ...||+++ + +++++.++..... ....+...+.++...+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG-lRlG~~i~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~ 301 (412)
T PTZ00433 224 FNGATFTSVADFDTTVPRVILGGTAKNLVVPG-WRLGWLLLVDPHGNGGDFLDGMKRLGML-VCGPCSVVQAALGEALLN 301 (412)
T ss_pred cCCCCccchhhccCCCceEEEccchhhcCCCC-eeEEEEEEeCCcccHHHHHHHHHHHhhc-cCCCChHHHHHHHHHHhc
Confidence 211 1 11 112478899999997666 46788886 2 3566666654332 22334444433333332
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC----HHHHHHHHHHc
Q 009167 405 ----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL 476 (541)
Q Consensus 405 ----tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~----~~~~~~~l~~L 476 (541)
.+....++..++.+.+.+.|+++..+. +..|. .|.++|+.++.. .....+|.+.|
T Consensus 302 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~----------------gg~f~~~~l~~~~~~~~~~~~~~~~~l 364 (412)
T PTZ00433 302 TPQEHLEQIVAKLEEGAMVLYNHIGECIGLS-PTMPR----------------GSMFLMSRLDLEKFRDIKSDVEFYEKL 364 (412)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCC----------------eeEEEEEEechhhcCCCCCHHHHHHHH
Confidence 233333445566777778887654331 22221 466789888631 11235666666
Q ss_pred c-CcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009167 477 K-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 525 (541)
Q Consensus 477 ~-~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e 525 (541)
. ..++.+..|..+. .++++||+++..
T Consensus 365 l~~~gV~v~pg~~f~-----------------------~~~~iRis~~~~ 391 (412)
T PTZ00433 365 LEEENVQVLPGEIFH-----------------------MPGFTRLTISRP 391 (412)
T ss_pred HHhcCEEEeCccccC-----------------------CCCeEEEEecCC
Confidence 4 4677777765431 146899999964
No 104
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3.8e-23 Score=218.23 Aligned_cols=282 Identities=15% Similarity=0.196 Sum_probs=189.9
Q ss_pred CCCCchhHHHHHHHHHHHhC--------C-CcEEEeCCHH-HHHHHHHHHhccCCC-EEEEcCCCCcchHHHHHhhcccC
Q 009167 205 GRYGNPTTVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGG-HIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g--------~-e~~i~~sSGs-~Ai~~al~all~pGd-~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
.+|+.+...+||++||++++ . .+.|++++|+ +++..++.+++.+|| +|+++.|+|.... ..++..
T Consensus 61 ~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~----~~~~~~ 136 (374)
T PRK02610 61 NRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYG----ILAQTL 136 (374)
T ss_pred cCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHH----HHHHHc
Confidence 45666677899999999987 2 2346666665 899888888888886 8999999998754 344556
Q ss_pred CeEEEEeCC------CCHHHHHHhccC---CCceEEEEeCCCCCCCccccHHHHHHHHHh-CCCEEEEeCCCCCCCcccc
Q 009167 274 GITATVIDP------ADMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKA 343 (541)
Q Consensus 274 Gi~v~~vd~------~d~e~Le~al~~---~~tklV~lesP~NPtG~i~dl~~Ia~la~~-~gi~lIvDea~a~~~~~~~ 343 (541)
|+++..++. .|+++|++++++ .++++|++++||||||.+++.+++.++++- ++++||+||+|........
T Consensus 137 g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~ 216 (374)
T PRK02610 137 GIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTL 216 (374)
T ss_pred CCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccch
Confidence 787777653 268999988863 359999999999999999997776666532 4899999999875422111
Q ss_pred ---c-ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHHHHHHHHHH
Q 009167 344 ---L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNST 416 (541)
Q Consensus 344 ---~-~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~r~~~~~~~ 416 (541)
+ .....+++.|+||.+|.+| ++.||+++++++++.+......++ .+.....++...+ +.+..++++..+.
T Consensus 217 ~~~~~~~~~~ivi~SfSK~~g~~G-lRiG~~v~~~~l~~~l~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 293 (374)
T PRK02610 217 VGELAQHPNWVILRTFSKAFRLAA-HRVGYAIGHPELIAVLEKVRLPYN--LPSFSQLAAQLALEHRQELLAAIPEILQE 293 (374)
T ss_pred HHHHhcCCCEEEEEecchhccCcc-cceeeeecCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 1 1123488999999998666 568999999999998877653333 3333333333333 3333344444455
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCc
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa 496 (541)
+..+.+.|++++.+. + +|. .|+++|++++.+ .....|.+.|...++.+..
T Consensus 294 r~~l~~~L~~~~~~~-~-~p~----------------~g~f~~~~l~~~-~~~~~~~~~l~~~gi~v~~----------- 343 (374)
T PRK02610 294 RDRLYQALQELPQLR-V-WPS----------------AANFLYLRLSQD-AALAALHQALKAQGTLVRH----------- 343 (374)
T ss_pred HHHHHHHHHhCCCcE-e-CCC----------------cceEEEEeCCCC-CCHHHHHHHHHHCCEEEEe-----------
Confidence 666777777665542 2 232 467899998743 2345666666555554421
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHhh
Q 009167 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALHA 540 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~e-~~edli~dL~~AL~~ 540 (541)
.++.+|||++.+ +.++.++.|.++|.+
T Consensus 344 -----------------~~~~lRls~~~~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 344 -----------------TGGGLRITIGTPEENQRTLERLQAALTQ 371 (374)
T ss_pred -----------------CCCeEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 136899999853 345566666666654
No 105
>PRK07337 aminotransferase; Validated
Probab=99.92 E-value=6.8e-23 Score=217.19 Aligned_cols=280 Identities=19% Similarity=0.187 Sum_probs=187.6
Q ss_pred hHHHHHHHHHHHh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 211 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...+|++.+|+++ |. +++++++++++|+.+++.+++++||+|++++|+|.+....+ ...|.++..++.
T Consensus 68 g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~ 143 (388)
T PRK07337 68 GLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFV----AAAEGRPVLVPS 143 (388)
T ss_pred CCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEeec
Confidence 4678999999886 32 34555555669999999999999999999999999865443 334666665543
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----cccccCC
Q 009167 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLGA 348 (541)
Q Consensus 283 -------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----~~~~~ga 348 (541)
.|++++++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|...... .....+.
T Consensus 144 ~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 222 (388)
T PRK07337 144 GPAERFQLTAADVEAAWGE-RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGD 222 (388)
T ss_pred CCccCCcCCHHHHHhhcCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccC
Confidence 268999998887 4899999999999999997 568888999999999999998753221 1122233
Q ss_pred c-EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHH
Q 009167 349 D-LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAK 422 (541)
Q Consensus 349 D-ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~-----tl~~r~~~~~~~a~~la~ 422 (541)
+ +++.|+||.++.+| ...|++++++++++++.......+...+.....++...+. .+....++..++++.+.+
T Consensus 223 ~vi~~~S~SK~~~~~G-~RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~ 301 (388)
T PRK07337 223 DVITINSFSKYFNMTG-WRLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVP 301 (388)
T ss_pred CEEEEEechhhcCCch-hheeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHH
Confidence 3 56889999998666 4589999999999888876655544444444443333332 233333344456677777
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC----HHHHHHHHHH-ccCcCeecccCCcccccccCcc
Q 009167 423 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDA-LKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 423 ~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~----~~~~~~~l~~-L~~~~iavS~G~~~sl~~~pa~ 497 (541)
.|+++. +.....|. .|.++|++++.. ......|.+. ++..++.+..|..+..
T Consensus 302 ~L~~~~-~~~~~~p~----------------~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~------ 358 (388)
T PRK07337 302 ALESLG-FKVPVMPD----------------GAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGP------ 358 (388)
T ss_pred HHHhcC-CccccCCC----------------eeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCC------
Confidence 887752 21111221 467889998631 1123455544 4456777777754321
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009167 498 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL 534 (541)
.-.++++||+++. +.+.+.+.+
T Consensus 359 --------------~~~~~~~Ri~~~~-~~~~l~~~l 380 (388)
T PRK07337 359 --------------HAPRDYIRLSYAT-SMSRLEEAV 380 (388)
T ss_pred --------------CCCCCEEEEEecC-CHHHHHHHH
Confidence 0025799999997 444444443
No 106
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.92 E-value=5.6e-23 Score=218.50 Aligned_cols=278 Identities=17% Similarity=0.183 Sum_probs=183.9
Q ss_pred CCCCchh-HHHHHHHHHHHh----CC-----CcEEEeCCHH-HHHHHHHHHhccC---CCEEEEcCCCCcchHHHHHhhc
Q 009167 205 GRYGNPT-TVVVEEKMSALE----GA-----ESTVIMASGM-SASTVMLLALVPA---GGHIVTTTDCYRKTRIFIETVL 270 (541)
Q Consensus 205 ~R~~~p~-~~~Le~~LA~l~----g~-----e~~i~~sSGs-~Ai~~al~all~p---Gd~Vlv~~~~y~~~~~~~~~~l 270 (541)
.+|+.+. ..+|++.||+++ |. ++.|++++|+ +++.+++.+++++ ||.|+++.|.|..... .+
T Consensus 59 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~----~~ 134 (396)
T PRK09147 59 ASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG----AA 134 (396)
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH----HH
Confidence 3344432 467888888765 53 2356666665 9999999999999 9999999999987543 34
Q ss_pred ccCCeEEEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc
Q 009167 271 PKMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN 340 (541)
Q Consensus 271 ~~~Gi~v~~vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~ 340 (541)
...|+++..++. .|++++++.+.+ ++++|++++|+||||.+++ +++|+++|++|+++||+||+|.....
T Consensus 135 ~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~ 213 (396)
T PRK09147 135 LLAGAEPYFLNCDPANNFAPDFDAVPAEVWA-RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYF 213 (396)
T ss_pred HhcCCEEEEeccCccccCccCHHHHHHHHhh-ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeecccccccc
Confidence 456777777753 367889887766 5999999999999999997 56788889999999999999876432
Q ss_pred cc---c---c----c-----cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH-
Q 009167 341 QK---A---L----S-----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK- 404 (541)
Q Consensus 341 ~~---~---~----~-----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~- 404 (541)
.. + . . ....+++.|+||.++.+| +..||+++++++++.+.......+..++......+...+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~ 292 (396)
T PRK09147 214 DEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPG-LRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWND 292 (396)
T ss_pred CCCCCCchhhhhccccCccccccEEEEeccccccCCcc-ceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc
Confidence 11 0 1 1 123489999999887766 5689999999999888776554444455444443333332
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCe
Q 009167 405 --TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYI 481 (541)
Q Consensus 405 --tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~i 481 (541)
.+....+...+.++.+.+.|.++ + .+..| ..|.++|++++.+ ...|.+.| +..++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~L~~~--~-~~~~p----------------~~g~f~~~~~~~~---~~~~~~~ll~~~gv 350 (396)
T PRK09147 293 EAHVRENRALYREKFDAVTPILAPV--L-DVQLP----------------DAGFYLWAKVPGD---DTEFARRLYADYNV 350 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHh--c-CCCCC----------------CeeEEEEEECCCC---HHHHHHHHHHhCCE
Confidence 23333344445566666677653 1 11122 1577899998722 24455554 34577
Q ss_pred ecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009167 482 APSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 525 (541)
Q Consensus 482 avS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e 525 (541)
.+..|..+..-... ..-..+++||+++..
T Consensus 351 ~v~pg~~f~~~~~~---------------~~~~~~~iRi~~~~~ 379 (396)
T PRK09147 351 TVLPGSYLAREAHG---------------VNPGAGRVRIALVAP 379 (396)
T ss_pred EEeCCccccccccC---------------CCCCCCeEEEEecCC
Confidence 77777654320000 001257999999964
No 107
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.92 E-value=1.7e-23 Score=223.07 Aligned_cols=303 Identities=16% Similarity=0.170 Sum_probs=197.4
Q ss_pred CCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 207 YGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~al----l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
......+++|+.|++++|.+ +++++++|++++++++.++ .++||+|+++.++|++....+. .++..|++++.+
T Consensus 44 ~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~-~~~~~g~~v~~v 122 (402)
T TIGR02006 44 EAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCR-YLEREGFEVTYL 122 (402)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHH-HHHhcCCEEEEE
Confidence 33456888999999999974 4566666679999888765 3689999999999998766553 345568888887
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEEC
Q 009167 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (541)
Q Consensus 281 d~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S 354 (541)
+. .|++++++++++ ++++|++++++||||.+.|+++|.++|+++|+++++|++++.+. +.+..+.++|+++.|
T Consensus 123 ~~~~~~~~d~~~l~~~l~~-~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s 201 (402)
T TIGR02006 123 PPKSNGLIDLEELKAAIRD-DTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSIS 201 (402)
T ss_pred ccCCCCcCCHHHHHHhcCC-CCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEe
Confidence 64 379999999987 49999999999999999999999999999999999999987653 345556789999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHh-------hhcCCCchHHHHHHHHHhHHHH----HHHHHHHHHHHHHHHHH
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGMKTL----HLRVQQQNSTALRMAKI 423 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-------~~~G~~~s~~~a~l~l~~l~tl----~~r~~~~~~~a~~la~~ 423 (541)
++|++|++| .|+++.+++....+.... +...++.+......+...++.+ ..+.++..+.+..+.+.
T Consensus 202 ~~K~~gp~G---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~ 278 (402)
T TIGR02006 202 GHKIYGPKG---IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNG 278 (402)
T ss_pred hhhhcCCCc---eEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999988766 455555543322222111 1111233332222222333333 22333444556666667
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCC
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 503 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~ 503 (541)
|++.+.+.-. .+. .. ....++.|.+++. ....++..|+ ++.++.|..++.... -
T Consensus 279 l~~~~~v~~~-~~~-~~------------~~p~~~~v~f~~~--~~~~~~~~l~--~i~v~~G~~c~~~~~--------~ 332 (402)
T TIGR02006 279 IKSIEEVYLN-GDL-EH------------RVPGNLNVSFNYV--EGESLIMALK--DLAVSSGSACTSASL--------E 332 (402)
T ss_pred HhcCCCEEEe-CCc-cc------------cCCCeEEEEEeCc--CHHHHHHhcC--CEEEechhhcCCCCC--------C
Confidence 7666665322 111 00 0112223333321 1234455554 677887765432110 0
Q ss_pred CHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 504 SQSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 504 ~~~~~~~~gi~----~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+......+|+. .+.||+|++..++++.++.|.++|++
T Consensus 333 ~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~ 373 (402)
T TIGR02006 333 PSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKS 373 (402)
T ss_pred ccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 11233455654 47999999999888888888888764
No 108
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.92 E-value=1.7e-22 Score=210.68 Aligned_cols=282 Identities=18% Similarity=0.204 Sum_probs=202.4
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~L 288 (541)
.+...+++++|+++++.++.+++++|++++..++.+++++||+|+++++.|...... +...|.++..++..|+++|
T Consensus 60 ~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l 135 (360)
T TIGR00858 60 SPLHEELEEELAEWKGTEAALLFSSGYLANVGVISALVGKGDLILSDALNHASLIDG----CRLSGARVRRYRHNDVEHL 135 (360)
T ss_pred cHHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHhCCCCCEEEEEccccHHHHHH----HHhcCCceEEecCCCHHHH
Confidence 366889999999999988899999999888778888899999999999999876543 3445778877887899999
Q ss_pred HHhccCC---CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-cc--c------c-ccCCcEEEECC
Q 009167 289 EAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QK--A------L-SLGADLVLHSA 355 (541)
Q Consensus 289 e~al~~~---~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~--~------~-~~gaDivv~S~ 355 (541)
++.+++. ++++|++++++|++|.+.|+++|.++|+++|++||+||+|..+.. .. . . ..+.|+++.|+
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 215 (360)
T TIGR00858 136 ERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTL 215 (360)
T ss_pred HHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEec
Confidence 9988642 478999999999999999999999999999999999999865321 11 0 1 23678999999
Q ss_pred ccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCchHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCCCc
Q 009167 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKV 430 (541)
Q Consensus 356 sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~s~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p~v 430 (541)
||++++. ||++++++++++.++..... ++...++.....+...++ ......++..++.+.+.+.|++++ +
T Consensus 216 sK~~~~~----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~ 290 (360)
T TIGR00858 216 SKALGSY----GAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG-F 290 (360)
T ss_pred hhhhhcc----CcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-C
Confidence 9999874 48999998888887643322 223334443333333333 223345566677888888887753 2
Q ss_pred eEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHh
Q 009167 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 510 (541)
Q Consensus 431 ~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~ 510 (541)
. + +| ..++++++.++.. ....+|.+.|...++.+..+..... +
T Consensus 291 ~-~-~~----------------~~~~~~~~~~~~~-~~~~~~~~~l~~~gI~v~~~~~~~~---~--------------- 333 (360)
T TIGR00858 291 T-L-MP----------------SCTPIVPVIIGDN-ASALALAEELQQQGIFVGAIRPPTV---P--------------- 333 (360)
T ss_pred c-c-CC----------------CCCCEEEEEeCCH-HHHHHHHHHHHHCCeeEeeeCCCCC---C---------------
Confidence 1 1 11 1467899998642 3456777777766776665422110 0
Q ss_pred cCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 511 YGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 511 ~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
-..+.||||++..+.++.++.+.++|
T Consensus 334 --~~~~~iRis~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 334 --AGTSRLRLTLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred --CCCceEEEEEcCCCCHHHHHHHHHhh
Confidence 02358999999877777677666665
No 109
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=8.4e-23 Score=211.63 Aligned_cols=283 Identities=20% Similarity=0.179 Sum_probs=198.3
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----C
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----~ 283 (541)
+.+..+++++.+++++|.++.+++++|++++.+++.+++++||+|+++++.|....... ......|+++..++. .
T Consensus 30 ~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 108 (338)
T cd06502 30 EDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAG-APEFLSGVKLLPVPGENGKL 108 (338)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCC-cHHHHcCceEEeecCCCCcC
Confidence 57889999999999999778899999999999999999999999999999997643211 112235788777764 4
Q ss_pred CHHHHHHhccC------CCceEEEEeCCCCCCCc--cccHHHHHHHHHhCCCEEEEeCCCCC------CCcccccccCCc
Q 009167 284 DMEGLEAALNN------NNVSLFFTESPTNPFLR--CVDVKLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGAD 349 (541)
Q Consensus 284 d~e~Le~al~~------~~tklV~lesP~NPtG~--i~dl~~Ia~la~~~gi~lIvDea~a~------~~~~~~~~~gaD 349 (541)
|+++|++++++ .++++|++++|+||++. ..++++|+++|+++|+++|+|++|.. +........++|
T Consensus 109 d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d 188 (338)
T cd06502 109 TPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVD 188 (338)
T ss_pred CHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCC
Confidence 78999999864 14899999999998442 23467899999999999999998632 111222335789
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCC--chHHHHHHHHHhHHH--HHHHHHHHHHHHHHHHHHHH
Q 009167 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKT--LHLRVQQQNSTALRMAKILE 425 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~--~s~~~a~l~l~~l~t--l~~r~~~~~~~a~~la~~L~ 425 (541)
+++.|+||+++.++ |+++++++++++.++.....++.. .++..++.+...++. ...+.++..++++++.+.|+
T Consensus 189 ~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~ 265 (338)
T cd06502 189 SVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALE 265 (338)
T ss_pred EEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998764 456678888988887765544432 344555555555543 34455666777888888888
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc---CcCeecccCCcccccccCccccccC
Q 009167 426 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK---IPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 426 ~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~---~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
+++. . .+|. .++++.+.++++.....++.+.+. ..++.+. +
T Consensus 266 ~~~~--~-~~~~----------------~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~----------~------- 309 (338)
T cd06502 266 ELGG--L-ESEV----------------QTNIVLLDPVEANAVFVELSKEAIERRGEGVLFY----------A------- 309 (338)
T ss_pred hcCC--C-cccc----------------cCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEE----------e-------
Confidence 7643 1 1221 367777777543344445554442 1232111 0
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 503 LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
. ..+.||++++..++++.++.+.+++++
T Consensus 310 --------~--~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 310 --------W--GEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred --------c--CCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 0 126899999998888888888888765
No 110
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=1.3e-22 Score=218.17 Aligned_cols=282 Identities=17% Similarity=0.174 Sum_probs=183.0
Q ss_pred CCCc-hhHHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE
Q 009167 206 RYGN-PTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 206 R~~~-p~~~~Le~~LA~l~g~--------e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
.|+. ....+||+++|++++. +++++++++++|+.+++..++++||+|++++|.|+.... .....|++
T Consensus 89 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~----~~~~~g~~ 164 (430)
T PLN00145 89 SYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEA----RAVFSGLE 164 (430)
T ss_pred CCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHH----HHHHcCCE
Confidence 4443 3567899999998742 346666666799999999999999999999999987442 23344677
Q ss_pred EEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----c
Q 009167 277 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K 342 (541)
Q Consensus 277 v~~vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----~ 342 (541)
+..++. .|++++++++++ +++++++++|+||||.+++ +++|+++|+++|++||+||+|...... .
T Consensus 165 ~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~ 243 (430)
T PLN00145 165 VRHFDLLPERGWEVDLEGVEALADE-NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFV 243 (430)
T ss_pred EEEeeCCcccCCcCCHHHHHHHhCc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCcc
Confidence 776652 278999998887 4999999999999999998 778888899999999999998754321 1
Q ss_pred cc----ccCCcEEEECCccccCCCCCceEEEEEe--ChHHHH------HHHHHhhhcCCCchHHHHHHHHHhHH-----H
Q 009167 343 AL----SLGADLVLHSATKFIGGHNDVLAGSISG--SGKLVT------QIRNLHHVLGGALNPNAAYLIIRGMK-----T 405 (541)
Q Consensus 343 ~~----~~gaDivv~S~sK~lgg~gd~~gG~lv~--~~~li~------~l~~~~~~~G~~~s~~~a~l~l~~l~-----t 405 (541)
+. .....+++.|+||.++.+| .+.||+++ ++.+++ .++.... .....+...+.++...++ .
T Consensus 244 ~~~~~~~~~~vi~~~S~SK~~~~pG-~RlG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~ 321 (430)
T PLN00145 244 PMGVFGEVAPVLTLGSISKRWVVPG-WRLGWIATCDPNGILKETKVVDSIRNYLN-ISTDPATFVQGAIPQIIANTKEEF 321 (430)
T ss_pred chhhhcccCcEEEEeccccccCCCC-eeEEEEEEecchhhhhhhHHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCHHHH
Confidence 11 1124588999999988777 45788886 334433 2333322 222233333333333332 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC----HHHHHHHHH-HccCcC
Q 009167 406 LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFID-ALKIPY 480 (541)
Q Consensus 406 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~----~~~~~~~l~-~L~~~~ 480 (541)
+....++..++++.+.+.|++++.+..+..|. .|..+++.++.. ......|+. .++..+
T Consensus 322 ~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~----------------ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~g 385 (430)
T PLN00145 322 FTKTLGLLKETADICYEKIKEIKCITCPHKPE----------------GSMFVMVKLDLSCLSGIKDDMDFCCKLAKEES 385 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCC----------------eeeEEEeccChhhcCCCCCHHHHHHHHHHhCC
Confidence 34445555567777788887765543222332 456778887521 112234443 334446
Q ss_pred eecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009167 481 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 481 iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL 534 (541)
+.+..|..+ | .++++|||++. +.+++.+.+
T Consensus 386 V~v~pG~~f----------------------g-~~~~lRis~~~-~~~~l~~al 415 (430)
T PLN00145 386 VVVLPGSAL----------------------G-MKNWLRITFAI-DPPSLEDGL 415 (430)
T ss_pred EEEeCcccc----------------------C-CCCeEEEEeCC-CHHHHHHHH
Confidence 666665432 2 14799999996 444443333
No 111
>PRK07550 hypothetical protein; Provisional
Probab=99.92 E-value=7.8e-23 Score=216.62 Aligned_cols=275 Identities=15% Similarity=0.106 Sum_probs=186.9
Q ss_pred hhHHHHHHHHHHHhC----C---CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 210 PTTVVVEEKMSALEG----A---ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 210 p~~~~Le~~LA~l~g----~---e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
+...+||+.++++++ . .+.|++++| ++|+..++.+++++||+|+++.|+|..... .++..|+++..++
T Consensus 67 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~ 142 (386)
T PRK07550 67 EGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKM----WLDMLGIRPVYLP 142 (386)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhcCCEEEEEe
Confidence 356677777777653 2 245666666 589999999999999999999999987553 3455688877776
Q ss_pred CC-------CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-----cccc-
Q 009167 282 PA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS- 345 (541)
Q Consensus 282 ~~-------d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-----~~~~- 345 (541)
.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|+++|++||+|++|+..... ....
T Consensus 143 ~~~~~~~~~~~~~l~~~~~~-~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~ 221 (386)
T PRK07550 143 CDEGPGLLPDPAAAEALITP-RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFAD 221 (386)
T ss_pred cCCCcCCCCCHHHHHHHhcc-cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhC
Confidence 42 67889999987 4899999999999999998 678999999999999999998653211 1111
Q ss_pred ---cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH---HH-HHHHHHHHH
Q 009167 346 ---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH---LR-VQQQNSTAL 418 (541)
Q Consensus 346 ---~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~---~r-~~~~~~~a~ 418 (541)
....+++.|+||.++.+| ..+|++++++++++.+.......+...+...+..+...++.+. .+ .+...++++
T Consensus 222 ~~~~~~~i~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 300 (386)
T PRK07550 222 PDWDDTLVHLYSFSKSYALTG-HRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRD 300 (386)
T ss_pred CCccccEEEEecchhhccCcc-cceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 123477999999997454 4589999999998888876655554445554444444443322 22 233445666
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCcccccccCcc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~ 497 (541)
.+.+.|.+++.+. + .| ..|.++|+.++.......++.+.| +..++.+..|..+..
T Consensus 301 ~l~~~L~~~~~~~-~-~~----------------~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~------ 356 (386)
T PRK07550 301 AFRAVFARLPGWE-L-LA----------------SGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGP------ 356 (386)
T ss_pred HHHHHHHhCCCce-e-CC----------------CceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCC------
Confidence 7778887654321 1 11 135678888864112345566654 456777777754310
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009167 498 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 529 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~ed 529 (541)
..+++|||+++..+.++
T Consensus 357 ---------------~~~~~iRis~~~~~~~~ 373 (386)
T PRK07550 357 ---------------GQEGYLRLAFANADVAG 373 (386)
T ss_pred ---------------CCCCEEEEEeecCCHHH
Confidence 12468999999765443
No 112
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.92 E-value=8.2e-24 Score=227.10 Aligned_cols=212 Identities=23% Similarity=0.305 Sum_probs=177.7
Q ss_pred hhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCC---CcchHHHHHhhcccCCeEEEEeCC---C
Q 009167 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC---YRKTRIFIETVLPKMGITATVIDP---A 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~---y~~~~~~~~~~l~~~Gi~v~~vd~---~ 283 (541)
...+.+|+.+|+++|++++++++||++|+.+++. .+.+||+||+++.. |++++.+. ..++..|+++.+++. .
T Consensus 122 ~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~-~l~~GdeVIvs~~e~v~~ggs~~i~-~~~~~~G~~~~~v~~~~~~ 199 (454)
T TIGR00474 122 SRYSHVEGLLCELTGAEDALVVNNNAAAVLLALN-TLAKGKEVIVSRGELVEIGGSFRIP-DVMEQSGAKLVEVGTTNRT 199 (454)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCCcCEEEECCChhhhhcchhhHH-HHHHHcCCEEEEeCCCCCC
Confidence 4578999999999999999999999999988885 46899999999877 55655543 456778999999976 4
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCC--C--ccccHHHHHHHHHhCCCEEEEeCCCCC------------CCcccccccC
Q 009167 284 DMEGLEAALNNNNVSLFFTESPTNPF--L--RCVDVKLVSDLCHKKGAIVCIDGTFAT------------PLNQKALSLG 347 (541)
Q Consensus 284 d~e~Le~al~~~~tklV~lesP~NPt--G--~i~dl~~Ia~la~~~gi~lIvDea~a~------------~~~~~~~~~g 347 (541)
+++++++++++ +|++|++++++|++ | .+.|+++|+++||++|+++++|++.+. +...++.++|
T Consensus 200 ~l~dle~aI~~-~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~G 278 (454)
T TIGR00474 200 HLKDYEDAITE-NTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAG 278 (454)
T ss_pred CHHHHHHhcCc-CCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcC
Confidence 78999999987 49999999999995 5 588999999999999999999997332 2234667889
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHH----------------HHhhhcCCCchHHHHHHHHHhHHHHHHHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR----------------NLHHVLGGALNPNAAYLIIRGMKTLHLRVQ 411 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~----------------~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~ 411 (541)
+|++++|++|+++|+. +|+++++++++++++ .....+|..+++..+|..+++++++..|++
T Consensus 279 aDiv~fSg~K~LgGp~---~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~ 355 (454)
T TIGR00474 279 VDLVTFSGDKLLGGPQ---AGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPE 355 (454)
T ss_pred CCEEEecCccccCCCe---EEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHH
Confidence 9999999999999883 899999988775532 122345666788889999999999999999
Q ss_pred HHHHHHHHHHHHHHhC
Q 009167 412 QQNSTALRMAKILEAH 427 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~ 427 (541)
++.+++++++++|++.
T Consensus 356 ~~~~~A~~la~~L~~~ 371 (454)
T TIGR00474 356 ELRARAERLAKRLKAA 371 (454)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999874
No 113
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.92 E-value=4.5e-23 Score=214.10 Aligned_cols=277 Identities=18% Similarity=0.212 Sum_probs=195.8
Q ss_pred ccCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 203 EYGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.|.+|+++...+||+.+++++|.+ +.|++++|+ +++..+... +.+| .|++++|+|.... ..++..|+++..+
T Consensus 40 ~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~~----~~~~~~g~~~~~~ 113 (330)
T TIGR01140 40 AWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRL-LAPG-RVLVLAPTYSEYA----RAWRAAGHEVVEL 113 (330)
T ss_pred HHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH-hCCC-eEEEeCCCcHHHH----HHHHHcCCEEEEe
Confidence 467888888899999999999974 567777776 777776544 6778 6999999998754 3455678898888
Q ss_pred CCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc-cc----ccCCcEEE
Q 009167 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-AL----SLGADLVL 352 (541)
Q Consensus 281 d~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~-~~----~~gaDivv 352 (541)
+ |++++++.++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|....... .. ..+.++++
T Consensus 114 ~--d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~ 189 (330)
T TIGR01140 114 P--DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVL 189 (330)
T ss_pred C--CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEE
Confidence 7 8999999884 3789999999999999999 5577788899999999999987544321 11 12467999
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHhCCC
Q 009167 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPK 429 (541)
Q Consensus 353 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~~~p~ 429 (541)
.|+||.+|.+| ++.|++++++++++.+......+ ..+...+..+.+.++. .....++..++.+.+.+.|++++.
T Consensus 190 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 266 (330)
T TIGR01140 190 RSLTKFFGLAG-LRLGFVVAHPALLARLREALGPW--TVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGG 266 (330)
T ss_pred EecchhhcCch-hhhhheeCCHHHHHHHHhcCCCC--CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999998665 45799999999988887665433 2344444444444432 223344555677778888887764
Q ss_pred ceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHH
Q 009167 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 430 v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
+. + .|. .|.++|+.++. ...|.+.|...++.+..|..+.
T Consensus 267 ~~-~-~~~----------------~~~f~~~~~~~----~~~l~~~l~~~gi~v~pg~~f~------------------- 305 (330)
T TIGR01140 267 LE-V-VGG----------------TALFLLVRTPD----AAALHEALARRGILIRDFDNFP------------------- 305 (330)
T ss_pred ce-E-CCC----------------CCeEEEEEcCC----HHHHHHHHHHCCEEEEECCCCC-------------------
Confidence 32 1 221 46788998864 2356666655677777765431
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 510 KYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
+...++|||+++..+ + . +.|.++|
T Consensus 306 --~~~~~~iRi~~~~~~-~-~-~~~~~~l 329 (330)
T TIGR01140 306 --GLDPRYLRFALPTDE-E-N-DRLEEAL 329 (330)
T ss_pred --CCCCCEEEEEecCHH-H-H-HHHHHhh
Confidence 123468999999654 2 2 6666665
No 114
>PLN02483 serine palmitoyltransferase
Probab=99.92 E-value=2.8e-22 Score=218.49 Aligned_cols=284 Identities=16% Similarity=0.179 Sum_probs=198.0
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~L 288 (541)
.+..++||++||+++|.++++++++|+.++..++.+++++||+|+++++.|.+... .++..|++++.++.+|++++
T Consensus 145 ~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~----~~~~~Ga~v~~~~~~d~~~l 220 (489)
T PLN02483 145 TKLHRELEELVARFVGKPAAIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (489)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHH----HHHHcCCeEEEEeCCCHHHH
Confidence 67899999999999999999999999998888899999999999999999998654 34556889998988888888
Q ss_pred HHhccC------CCc-----e-EEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc----------ccccc
Q 009167 289 EAALNN------NNV-----S-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----------KALSL 346 (541)
Q Consensus 289 e~al~~------~~t-----k-lV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~----------~~~~~ 346 (541)
++.+++ .++ + +|+++...|++|.+.++++|.++|++||++||+||+++.+... .....
T Consensus 221 e~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~ 300 (489)
T PLN02483 221 EEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPA 300 (489)
T ss_pred HHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcc
Confidence 776541 112 4 6677777899999999999999999999999999998643211 11123
Q ss_pred CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHHHH---------HHHHHHHHH
Q 009167 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---------HLRVQQQNS 415 (541)
Q Consensus 347 gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~tl---------~~r~~~~~~ 415 (541)
++||++.|+||.+|+. ||++++++++++.++.... .++..+++..+..+...++.+ ..+.++..+
T Consensus 301 ~~dI~~~SfSKs~g~~----GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~ 376 (489)
T PLN02483 301 DVDIMMGTFTKSFGSC----GGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRE 376 (489)
T ss_pred cCcEEEEecchhcccC----ceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHH
Confidence 5799999999999865 5999999999999886532 234444444433344444322 234566777
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccC
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
+++.+.+.|+++ ++ .+..+. .+.++++.+.. ......|.+.|...++.+...+. |
T Consensus 377 ~~~~l~~~L~~~-G~-~v~~~~----------------~sp~~~l~l~~-~~~~~~~~~~Ll~~GI~v~~~~f------p 431 (489)
T PLN02483 377 NSNFFRSELQKM-GF-EVLGDN----------------DSPVMPIMLYN-PAKIPAFSRECLKQNVAVVVVGF------P 431 (489)
T ss_pred HHHHHHHHHHHC-CC-cccCCC----------------CCCEEEEEECC-HHHHHHHHHHHHHCCcEEeeeCC------C
Confidence 888888888875 22 121110 23466776643 23455666666555766653211 1
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
+. ....+.+||+++..++++.++.+.++|+
T Consensus 432 ~~--------------p~~~~~vRi~isa~~t~edId~~l~~L~ 461 (489)
T PLN02483 432 AT--------------PLLLARARICISASHSREDLIKALEVIS 461 (489)
T ss_pred CC--------------CCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 10 0123679999987555554554444443
No 115
>PLN02656 tyrosine transaminase
Probab=99.92 E-value=1.6e-22 Score=216.10 Aligned_cols=277 Identities=16% Similarity=0.168 Sum_probs=182.1
Q ss_pred chhHHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 209 NPTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~--------e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.....+||++++++++. +++++++++++|+.+++.+++++||+|++++|+|+.... .....|+++..+
T Consensus 72 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~i 147 (409)
T PLN02656 72 TVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYEL----CAAFRHLEVRYV 147 (409)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHH----HHHHcCCEEEEE
Confidence 34567889999988741 345556566699999999999999999999999976432 233357777766
Q ss_pred CC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----ccc--
Q 009167 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-- 344 (541)
Q Consensus 281 d~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----~~~-- 344 (541)
+. .|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|++||+|++|...... .++
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 226 (409)
T PLN02656 148 DLLPEKGWEVDLDAVEALADQ-NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGV 226 (409)
T ss_pred eCCCcCCCCCCHHHHHHHhcc-CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHH
Confidence 53 278899988877 4899999999999999975 778899999999999999998754321 111
Q ss_pred --ccCCcEEEECCccccCCCCCceEEEEEeC--------hHHHHHHHHHhhhcCCCchHHHHHHHHHhHH-----HHHHH
Q 009167 345 --SLGADLVLHSATKFIGGHNDVLAGSISGS--------GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLR 409 (541)
Q Consensus 345 --~~gaDivv~S~sK~lgg~gd~~gG~lv~~--------~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~-----tl~~r 409 (541)
.....+++.||||.|+.+| .+.||++++ +++++.+.......+ ..+...+.++...++ .+...
T Consensus 227 ~~~~~~vi~~~SfSK~f~~pG-lRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~~~~~~~~~~ 304 (409)
T PLN02656 227 FGSIVPVLTLGSLSKRWIVPG-WRLGWFVTTDPSGSFRDPKIVERIKKYFDILG-GPATFIQAAVPTILEQTDESFFKKT 304 (409)
T ss_pred hcccCcEEEEcccchhccCcc-eeEEEEEEeCcccccccHHHHHHHHHHHhhhc-CCCHHHHHHHHHHHhcCcHHHHHHH
Confidence 1124588999999987766 568999873 477787776544332 234444444444443 23333
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC----HHHHHHH-HHHccCcCeecc
Q 009167 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKF-IDALKIPYIAPS 484 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~----~~~~~~~-l~~L~~~~iavS 484 (541)
.++..+++..+.+.|+.++.+..+..|. .|..+|+.++.. ......+ ...+...++.+.
T Consensus 305 ~~~~~~~r~~~~~~L~~~~~~~~~~~p~----------------gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~ 368 (409)
T PLN02656 305 INILKQSSDICCDRIKEIPCITCPHKPE----------------GSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIIL 368 (409)
T ss_pred HHHHHHHHHHHHHHHhhCCCCcCCcCCC----------------eEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEe
Confidence 4445566677777887654321111121 355688888521 0112222 344455577777
Q ss_pred cCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHH
Q 009167 485 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKA 532 (541)
Q Consensus 485 ~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~ 532 (541)
.|..+ | .++++||+++. +.+++.+
T Consensus 369 pg~~f----------------------g-~~~~iRi~~~~-~~e~l~e 392 (409)
T PLN02656 369 PGTAV----------------------G-LKNWLRITFAA-DPSSLEE 392 (409)
T ss_pred cchhc----------------------C-CCCeEEEEeCC-CHHHHHH
Confidence 66442 1 14689999996 4444433
No 116
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3e-23 Score=217.39 Aligned_cols=278 Identities=18% Similarity=0.223 Sum_probs=188.0
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+.||+++...+|++++|+++|.+ +.|++++|+ +++.+++.+++++| |+|+++.|+|.... ..++..|+++..+
T Consensus 54 ~~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~----~~~~~~g~~v~~v 129 (354)
T PRK04635 54 LNRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA----ISAETFNVGVKAL 129 (354)
T ss_pred hccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEE
Confidence 57788888899999999999973 455666665 99999999999999 89999999997643 3445668888777
Q ss_pred CCC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC-CCEEEEeCCCCCCCcccc----c-ccCCc
Q 009167 281 DPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKA----L-SLGAD 349 (541)
Q Consensus 281 d~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~-gi~lIvDea~a~~~~~~~----~-~~gaD 349 (541)
+.+ |++.++ .+ + ++++|++++||||||.+++.+++.++++.. +++||+||+|........ . ....-
T Consensus 130 ~~~~~~~~~~~~l~-~~-~-~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~ 206 (354)
T PRK04635 130 PLTADYQLPLDYIE-QL-D-GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNL 206 (354)
T ss_pred ecCCCCCCCHHHHH-hc-c-CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCE
Confidence 642 567776 34 4 599999999999999999999999988763 799999999865432111 1 11234
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHH
Q 009167 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG-----MKTLHLRVQQQNSTALRMAKIL 424 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~-----l~tl~~r~~~~~~~a~~la~~L 424 (541)
+++.|+||++|.+| .+.|++++++++++.+......++ .+......+... .+.+..+.++..++++.+.+.|
T Consensus 207 iv~~S~SK~~~l~G-lRlG~~i~~~~~~~~l~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 283 (354)
T PRK04635 207 VVLRTLSKAFALAG-ARCGFTLANEELIEILMRVIAPYP--VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAAL 283 (354)
T ss_pred EEEechHHHhhhhH-HHHhhhhCCHHHHHHHHhhcCCCC--CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999998555 347899999999988876443332 222222222222 2334444555666778888888
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCC
Q 009167 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 504 (541)
Q Consensus 425 ~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~ 504 (541)
++++.+. + +|. .|+++++.+++ . ..+.+.|...++.+..++. +
T Consensus 284 ~~~~~~~-~-~~~----------------~g~f~~~~~~~-~---~~~~~~l~~~gv~v~~~~~------~--------- 326 (354)
T PRK04635 284 SMYGGAK-V-LEG----------------NGNYVLAKFDD-V---DAVFKALWDAGIVARAYKD------P--------- 326 (354)
T ss_pred HhCCCce-E-CCC----------------CCcEEEEECCC-H---HHHHHHHHHCCEEEEECCC------C---------
Confidence 8775442 2 232 35688888863 2 2344445455665543210 0
Q ss_pred HHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 505 QSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 505 ~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
+ .+++||||++.+ +.++.|.++|+
T Consensus 327 -------~-~~~~lRis~~~~---e~~~~l~~al~ 350 (354)
T PRK04635 327 -------R-LANCIRFSFSNR---AETDKLIGLIR 350 (354)
T ss_pred -------C-CCCeEEEEeCCH---HHHHHHHHHHH
Confidence 0 246899999852 33455555554
No 117
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.92 E-value=3.2e-22 Score=210.81 Aligned_cols=287 Identities=18% Similarity=0.159 Sum_probs=204.4
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCH
Q 009167 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~ 285 (541)
++..+..+++++.++++++.++.+++++|++++..++..++++||+|+++++.|+.+...+ ...|.++..++..|+
T Consensus 80 ~g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~----~~~g~~~~~~~~~d~ 155 (385)
T PRK05958 80 TGNSPAHEALEEELAEWFGAERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDGA----RLSRARVRRYPHNDV 155 (385)
T ss_pred cCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHH----HhcCCceEEeCCCCH
Confidence 3456788999999999999888999999998888888888999999999999998765433 345777777887899
Q ss_pred HHHHHhccCC--CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc-c--------ccc-cCCcEEEE
Q 009167 286 EGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K--------ALS-LGADLVLH 353 (541)
Q Consensus 286 e~Le~al~~~--~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~-~--------~~~-~gaDivv~ 353 (541)
+++++.+++. +++++++++++|++|.+.++++|.++|+++|+++|+|++|+.+... . ... ...++++.
T Consensus 156 ~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~ 235 (385)
T PRK05958 156 DALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVG 235 (385)
T ss_pred HHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEE
Confidence 9999988652 3678888889999999999999999999999999999998654211 0 111 23458899
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCC
Q 009167 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 354 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p 428 (541)
|+||++++. ||++++++++++.+..... ..+...++..+..+...++.+ ....++..++.+.+.+.|++.+
T Consensus 236 s~sK~~~~~----Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 311 (385)
T PRK05958 236 TLGKALGSS----GAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG 311 (385)
T ss_pred echhhcccC----CcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999864 4888888888877754322 222334444444444444433 2344555667777888887642
Q ss_pred CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHH
Q 009167 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
++ + . .+.|++++|.+++ .....+|.+.|...++.+..++....
T Consensus 312 -~~-~-~----------------~~~~~~~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~~----------------- 354 (385)
T PRK05958 312 -FQ-L-M----------------DSQSAIQPLIVGD-NERALALAAALQEQGFWVGAIRPPTV----------------- 354 (385)
T ss_pred -CC-c-C----------------CCCCCEEEEEeCC-HHHHHHHHHHHHHCCceEecccCCCC-----------------
Confidence 21 1 1 1246789999864 24566778887766777654321100
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 509 LKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
....+.||||++....++.++.+.++|++
T Consensus 355 ---~~~~~~lRis~~~~~~~~~i~~~l~~l~~ 383 (385)
T PRK05958 355 ---PAGTSRLRITLTAAHTEADIDRLLEALAE 383 (385)
T ss_pred ---CCCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence 01246899999987777777777777765
No 118
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=1.9e-22 Score=215.49 Aligned_cols=284 Identities=13% Similarity=0.097 Sum_probs=179.4
Q ss_pred chhHHHHHHHHHHHhC------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 209 NPTTVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g------~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.....+|+++||++++ . ++.++++++++++.+++.+++.+||.|+++.|+|+..... +...|+++..+
T Consensus 73 ~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~----~~~~g~~~~~~ 148 (409)
T PLN00143 73 TGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETY----AIFHHLEIRHF 148 (409)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHH----HHHcCCEEEEE
Confidence 3456679999999873 2 3344444445999999999999999999999999885533 34456776666
Q ss_pred CC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----ccc--
Q 009167 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-- 344 (541)
Q Consensus 281 d~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----~~~-- 344 (541)
+. .|+++|++++++ +++++++++||||||.+++ +++|+++|++|+++||+||+|...... .+.
T Consensus 149 ~~~~~~~~~~d~~~l~~~~~~-~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~ 227 (409)
T PLN00143 149 DLLPEKGWEVDLDAVEAIADE-NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGL 227 (409)
T ss_pred eccCCCCCcCCHHHHHHhccc-CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhh
Confidence 42 278999998876 4899999999999999998 667888899999999999998754321 111
Q ss_pred -c-cCCcEEEECCccccCCCCCceEEEEEeC-h-HHH------HHHHHHhhhcCCCchHHHHHHHHHhHH-----HHHHH
Q 009167 345 -S-LGADLVLHSATKFIGGHNDVLAGSISGS-G-KLV------TQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLR 409 (541)
Q Consensus 345 -~-~gaDivv~S~sK~lgg~gd~~gG~lv~~-~-~li------~~l~~~~~~~G~~~s~~~a~l~l~~l~-----tl~~r 409 (541)
. ....+++.|+||.|+.+| ...||++++ + .++ +.+...... ....+...+.++...++ .+...
T Consensus 228 ~~~~~~vi~~~SfSK~f~~pG-lRvG~~v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~ 305 (409)
T PLN00143 228 FASIVPVITLGSISKRWMIPG-WGLGWLVTCDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILEKTTEDFFSKT 305 (409)
T ss_pred hcccCcEEEEccchhhcCCCc-cceEEEEeeCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcChHHHHHHH
Confidence 1 123488999999988776 468888873 3 333 233332221 11123333333333332 34444
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC----CHHHHHHHHH-HccCcCeecc
Q 009167 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DLTATIKFID-ALKIPYIAPS 484 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~----~~~~~~~~l~-~L~~~~iavS 484 (541)
.++..++.+.+.+.|.+++.......| ..|.++|+.++. +......++. .++..++.+.
T Consensus 306 ~~~~~~~~~~~~~~L~~~~~~~~~~~p----------------~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~ 369 (409)
T PLN00143 306 INILRAALAFCYDKLKEIPCIMCPQKA----------------EGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIIL 369 (409)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCC----------------CeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEe
Confidence 555556666677777665422101111 146788999862 1112334443 3355677777
Q ss_pred cCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHH
Q 009167 485 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQAL 538 (541)
Q Consensus 485 ~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL 538 (541)
.|..+ | .++++||+++.. +.++-++.|.+.|
T Consensus 370 pg~~f----------------------~-~~~~iRi~~~~~~~~l~~al~rl~~~l 402 (409)
T PLN00143 370 PGVTV----------------------G-LKNWLRITFAVEQSSLEDGLGRLKSFC 402 (409)
T ss_pred Ccccc----------------------C-CCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 76442 1 147899999953 2233344444444
No 119
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.92 E-value=1.6e-22 Score=215.37 Aligned_cols=286 Identities=14% Similarity=0.120 Sum_probs=187.0
Q ss_pred CchhHHHHHHHHHHHhC-----C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 208 GNPTTVVVEEKMSALEG-----A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g-----~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+.+...+|++++|++++ . +++++++++++++.+++.+++++||+|+++.|+|.... ..++..|+++..+
T Consensus 71 ~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~----~~~~~~g~~v~~~ 146 (401)
T TIGR01264 71 PTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE----TLAESMGIEVKLY 146 (401)
T ss_pred CCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH----HHHHHcCCEEEEe
Confidence 34566789999999986 2 34555555669999999999999999999999998754 3445567777766
Q ss_pred CC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc----c-cc
Q 009167 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A-LS 345 (541)
Q Consensus 281 d~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~----~-~~ 345 (541)
+. .|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|++||+||+|....... + ..
T Consensus 147 ~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 225 (401)
T TIGR01264 147 NLLPDKSWEIDLKQLESLIDE-KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLAS 225 (401)
T ss_pred ecCCccCCCCCHHHHHHHhcc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHH
Confidence 42 368999988876 4899999999999999987 6788899999999999999987543211 1 11
Q ss_pred c---CCcEEEECCccccCCCCCceEEEEEeCh------HHHHHHHHHhhhcCCCchHHHHHHHHHhHH-----HHHHHHH
Q 009167 346 L---GADLVLHSATKFIGGHNDVLAGSISGSG------KLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQ 411 (541)
Q Consensus 346 ~---gaDivv~S~sK~lgg~gd~~gG~lv~~~------~li~~l~~~~~~~G~~~s~~~a~l~l~~l~-----tl~~r~~ 411 (541)
. ...+++.|+||.++.+| .+.||+++++ ++++.++..... ....+......+...+. .+....+
T Consensus 226 ~~~~~~vi~~~SfSK~~~~~G-lRiG~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~l~~~~~ 303 (401)
T TIGR01264 226 LSSTVPILSCGGLAKRWLVPG-WRLGWIIIHDRRGILRDIRDGLVKLSQR-ILGPCTIVQGALPSILLRTPQEYFDGTLS 303 (401)
T ss_pred cCCCCcEEEEccCcccCCCcc-ceEEEEEecCcchhHHHHHHHHHHHhhc-cCCCCcHHHHHHHHHHHhCcHHHHHHHHH
Confidence 1 12478999999987766 5688888763 344444443321 11223333333333332 2333344
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC----HHHHHHHHHHc-cCcCeecccC
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL-KIPYIAPSFG 486 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~----~~~~~~~l~~L-~~~~iavS~G 486 (541)
+..++++.+.+.|++++.+. +..|. .|.++|+.++.. ......+.+.+ +..++.+..|
T Consensus 304 ~~~~~r~~l~~~L~~~~~~~-~~~p~----------------~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg 366 (401)
T TIGR01264 304 VLESNAMLCYGALAAVPGLR-PVMPS----------------GAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPG 366 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCc-ccCCC----------------eeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCc
Confidence 55566777888888765432 22231 577889987521 11234555554 3567777766
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009167 487 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 540 (541)
Q Consensus 487 ~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~~ 540 (541)
+.+. .++++|||++.. +.++.++.|.+.+++
T Consensus 367 ~~f~-----------------------~~~~iRis~~~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 367 SCFE-----------------------YPGFFRVVLTVPVVMMEEACSRIQEFCER 399 (401)
T ss_pred hhcC-----------------------CCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 4421 146899999963 234445555555543
No 120
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=2.2e-23 Score=219.47 Aligned_cols=275 Identities=15% Similarity=0.194 Sum_probs=191.1
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+++...+|++.||+++|.+ +.|++++|+ +++.+++.+++++||+|+++.|+|..... .+...|+++..++.
T Consensus 59 ~~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~----~~~~~g~~v~~v~~ 134 (366)
T PRK01533 59 ALYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRH----HAIIEGCEVKEVAL 134 (366)
T ss_pred CcCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHH----HHHHcCCEEEEeec
Confidence 3567777889999999999873 466666665 99999999999999999999999987553 34556888877764
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHH---HhCCCEEEEeCCCCCCCcc----cc---c-ccC
Q 009167 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLC---HKKGAIVCIDGTFATPLNQ----KA---L-SLG 347 (541)
Q Consensus 283 ----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la---~~~gi~lIvDea~a~~~~~----~~---~-~~g 347 (541)
.|+++|++++++ ++++|++++||||||.+++.+++.+++ ++++ ++|+||+|...... .. . ..+
T Consensus 135 ~~~~~d~~~l~~~~~~-~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~ 212 (366)
T PRK01533 135 NNGVYDLDEISSVVDN-DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHK 212 (366)
T ss_pred CCCCcCHHHHHHHhCc-CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCC
Confidence 379999998876 489999999999999999977655554 4444 67889997643211 11 1 123
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKIL 424 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L 424 (541)
..+++.|+||.+|.+| +..||+++++++++.++..... ..++.....++...++. +....+...++++++.+.|
T Consensus 213 ~vi~~~SfSK~~~l~G-lRiG~~i~~~~~~~~l~~~~~~--~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l 289 (366)
T PRK01533 213 NILVLRTFSKAYGLAS-FRVGYAVGHEELIEKLNVVRLP--FNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFC 289 (366)
T ss_pred CEEEEeCchHHhcChH-HHHhHHhCCHHHHHHHHHhcCC--CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999998665 3578999999999988876532 34555555555444432 2233334445566666777
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCC
Q 009167 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 504 (541)
Q Consensus 425 ~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~ 504 (541)
+.+. +. + +| ..|+++++.+++ ...+.+.|...|+.+.. +
T Consensus 290 ~~~g-~~-~-~~----------------~~~nf~~~~~~~----~~~~~~~l~~~GI~Vr~--~---------------- 328 (366)
T PRK01533 290 KENE-IP-F-YQ----------------SQTNFIFLPVEN----GGEIYEACAHAGFIIRP--F---------------- 328 (366)
T ss_pred HhCC-Cc-c-CC----------------CcCcEEEEeCCC----HHHHHHHHHHCCcEEcc--C----------------
Confidence 6542 21 1 11 147899999853 23566666666665542 0
Q ss_pred HHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009167 505 QSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 539 (541)
Q Consensus 505 ~~~~~~~gi~~~~IRlSvG~-e~~edli~dL~~AL~ 539 (541)
+++||||+|. ++.+.+++.|++.++
T Consensus 329 ----------~~~iRis~~~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 329 ----------PNGVRITVGTREQNEGVISVLQQHFE 354 (366)
T ss_pred ----------CCceEEeCCCHHHHHHHHHHHHHHHH
Confidence 2579999996 455677777776654
No 121
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=1.8e-22 Score=215.62 Aligned_cols=282 Identities=20% Similarity=0.193 Sum_probs=193.7
Q ss_pred hhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHH
Q 009167 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~--pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~ 287 (541)
+...+||++||+++|.++.++++||++|+..++..+.+ +||.|+++...|..... .++..|.++..++.+|.+.
T Consensus 91 ~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~----~~~~~g~~~~~~~~~d~~~ 166 (410)
T PRK13392 91 HPHVLLERELADLHGKESALLFTSGYVSNDAALSTLGKLLPGCVILSDALNHASMIE----GIRRSGAEKQVFRHNDLAD 166 (410)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHH----HHHHcCCeEEEEeCCCHHH
Confidence 36789999999999999999999999999888887754 89988887777766543 2344577777776667777
Q ss_pred HHHhcc---CCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc-c--------ccccCCcEEEECC
Q 009167 288 LEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K--------ALSLGADLVLHSA 355 (541)
Q Consensus 288 Le~al~---~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~-~--------~~~~gaDivv~S~ 355 (541)
+++.++ ..++++|++++|+||+|.+.|+++|.++|+++|+++|+||+|+.+... . ......|+++.|+
T Consensus 167 l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tl 246 (410)
T PRK13392 167 LEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTL 246 (410)
T ss_pred HHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEC
Confidence 766653 225899999999999999999999999999999999999998744321 1 1112468999999
Q ss_pred ccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCchHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHhCCCc
Q 009167 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPKV 430 (541)
Q Consensus 356 sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~~~p~v 430 (541)
+|.+|.. ||++++++++++.++..... ++...++..++.+...++. .....++..++++++.+.|++. ++
T Consensus 247 sK~~g~~----GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 321 (410)
T PRK13392 247 AKAFGCL----GGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN-GI 321 (410)
T ss_pred hHhhhcc----cchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 9999864 48998999998888765542 3344455444444444443 3334455667778888888764 22
Q ss_pred eEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCcccccccCccccccCCCHHHHH
Q 009167 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 431 ~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
. + +| +.++++.+.++ ......++.+.|. ..++.++.+.. |.. +
T Consensus 322 ~-~-~~----------------~~~~~~~i~~~-~~~~~~~~~~~L~~~~GI~v~~~~~------p~~------~----- 365 (410)
T PRK13392 322 P-V-MP----------------SPSHIVPVMVG-DPTLCKAISDRLMSEHGIYIQPINY------PTV------P----- 365 (410)
T ss_pred C-C-CC----------------CCCCEEEEEeC-CHHHHHHHHHHHHHhCCEEEeeeCC------CCC------C-----
Confidence 1 1 11 13566666664 3234566777763 45766654321 110 0
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 510 KYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
.....|||++...++++.++.+.++|+
T Consensus 366 ---~~~~~lRis~~~~~t~edid~l~~aL~ 392 (410)
T PRK13392 366 ---RGTERLRITPTPLHDDEDIDALVAALV 392 (410)
T ss_pred ---CCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 123689999976665555566655554
No 122
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.92 E-value=1.1e-22 Score=214.34 Aligned_cols=299 Identities=22% Similarity=0.243 Sum_probs=211.3
Q ss_pred CccCCCCchhHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGAES---TVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~e~---~i~~sSGs~Ai~~al~al---l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
+.+++......+++++.+++++|++. .+++++++.+++.++.++ +++||+|++....|++....+....++.|+
T Consensus 35 ~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~ 114 (371)
T PF00266_consen 35 SHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGA 114 (371)
T ss_dssp STTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTE
T ss_pred cchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchh
Confidence 34444456778899999999999854 566677779999999998 799999999999999988777777778899
Q ss_pred EEEEeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCc
Q 009167 276 TATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGAD 349 (541)
Q Consensus 276 ~v~~vd~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaD 349 (541)
+++.++. .|++++++++++ ++++|++.+.+|.+|.+.|+++|.++||++|+++++|.+++.+. +.+..++++|
T Consensus 115 ~v~~i~~~~~~~~~~~~~~~~l~~-~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D 193 (371)
T PF00266_consen 115 EVRVIPADPGGSLDLEDLEEALNP-DTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELGAD 193 (371)
T ss_dssp EEEEEEEGTTSSCSHHHHHHHHHT-TESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTES
T ss_pred hhccccccccchhhhhhhhhhhcc-ccceEEeecccccccEEeeeceehhhhhccCCceeEechhccccccccccccccc
Confidence 9887753 378999999987 59999999999999999999999999999999999999987653 4666678999
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh---------------------hcCCCchHHHHHHHHHhHHHH--
Q 009167 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-- 406 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~s~~~a~l~l~~l~tl-- 406 (541)
+++.|.+|++||+| .|+++.+++++++++.... ..+++.+....+.+..+++.+
T Consensus 194 ~~~~s~~Kl~gp~G---~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~ 270 (371)
T PF00266_consen 194 FLVFSSHKLGGPPG---LGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEE 270 (371)
T ss_dssp EEEEESTSTTSSST---EEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHH
T ss_pred eeeecccccCCCCc---hhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhc
Confidence 99999999666555 6889999988887742111 112334333333223333332
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeec
Q 009167 407 ---HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 483 (541)
Q Consensus 407 ---~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iav 483 (541)
+...++..+..+++.+.|++.+.+. +..|.- + ...+++++|.+++. ....+...|+..+|.+
T Consensus 271 ~g~~~i~~~~~~l~~~~~~~l~~~~~~~-~~~~~~---~---------~~~~~i~~~~~~~~--~~~~~~~~L~~~~I~~ 335 (371)
T PF00266_consen 271 IGIERIRERIRELAEYLREALEELPGIE-VLGPDD---E---------PRRPSIVSFNLPGS--DADDVVKYLEERGIAV 335 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTEE-ESSSSC---G---------GBGTTEEEEEETTS--SHHHHHHHHHHHTEEE
T ss_pred cccccchhhhhhHHHHHHhhhhcCCcee-Eeeecc---c---------ccccceEEEeecCC--CHHHHHHHHhhcCEEE
Confidence 2223445567778888888887764 322211 1 12578999999753 2344455555557788
Q ss_pred ccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009167 484 SFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 484 S~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL 534 (541)
+.|..+.. | .....+. ++.||+|++..++++.++.|
T Consensus 336 ~~G~~~~~---~-----------~~~~~~~-~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 336 STGSACAG---P-----------SLDILGM-GGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EESTTTCH---H-----------HHHHHHT-TTEEEEE-GTTSSHHHHHHH
T ss_pred eccCcccH---H-----------HHHHhCC-CCEEEEeccCCCCHHHHhhC
Confidence 87755431 1 0011112 38999999999998877765
No 123
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=9.2e-23 Score=214.98 Aligned_cols=285 Identities=17% Similarity=0.270 Sum_probs=189.8
Q ss_pred CCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-
Q 009167 206 RYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~- 282 (541)
+|+.+....||++||++++.+ +.|++++|+ +++..++..++++||.|++++|+|+.....+ ...|.++..++.
T Consensus 63 ~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~----~~~g~~~~~vp~~ 138 (369)
T PRK08153 63 KYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHV----AGFGGRLVTVPYR 138 (369)
T ss_pred cCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHH----HHcCCeEEEeeCC
Confidence 355556789999999999873 456666666 8999999999999999999999998755333 335666665543
Q ss_pred ---CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHh--CCCEEEEeCCCCCCCccc---cc--ccCCcEEE
Q 009167 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK---AL--SLGADLVL 352 (541)
Q Consensus 283 ---~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~--~gi~lIvDea~a~~~~~~---~~--~~gaDivv 352 (541)
.|++++++.+...++++|++++|+||||.+++.+++.++++. ++++||+||+|....... .+ .....+++
T Consensus 139 ~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~ 218 (369)
T PRK08153 139 DDREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRM 218 (369)
T ss_pred CCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEE
Confidence 367888776654358999999999999999998877777654 389999999987543211 11 11234889
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHhCCC
Q 009167 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPK 429 (541)
Q Consensus 353 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~~~p~ 429 (541)
.||||.+|.+| +..||+++++++++.+......++ +++..++++...++. +....+...++++.+.+.|++.+
T Consensus 219 ~SfSK~~g~~G-lRiG~~v~~~~~~~~l~~~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g- 294 (369)
T PRK08153 219 RTFSKAYGLAG-ARVGYAIGAPGTIKAFDKVRNHFG--MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANG- 294 (369)
T ss_pred ecchHhccCcc-hheeeeecCHHHHHHHHHhhcCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-
Confidence 99999998555 457999999999988877654433 455555554444432 22233344456666777776542
Q ss_pred ceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHH
Q 009167 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 430 v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
+. .+|. .|+++++.++.+...+..+.+.|...|+.+...+.
T Consensus 295 ~~--~~p~----------------~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~--------------------- 335 (369)
T PRK08153 295 LT--PLPS----------------ATNFVAIDCGRDGAFARAVLDGLIARDIFVRMPGV--------------------- 335 (369)
T ss_pred Cc--cCCC----------------cCcEEEEECCCCcccHHHHHHHHHHCCeEEeeCCC---------------------
Confidence 21 1221 46678888753224466778777666766531111
Q ss_pred hcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009167 510 KYGIMDNLVRFSFGV-EDFEDLKADVLQALH 539 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~-e~~edli~dL~~AL~ 539 (541)
+-.++++|||++. ++.+.+++.|.+.+.
T Consensus 336 --~~~~~~iRis~~~~~~~~~~~~al~~~~~ 364 (369)
T PRK08153 336 --APLDRCIRVSCGPDEELDLFAEALPEALE 364 (369)
T ss_pred --CCCCCeEEEecCCHHHHHHHHHHHHHHHH
Confidence 0024689999994 234455555555543
No 124
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.2e-22 Score=212.36 Aligned_cols=281 Identities=16% Similarity=0.178 Sum_probs=188.0
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCC-HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 205 GRYGNPTTVVVEEKMSALEGAE-STVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e-~~i~~sS-Gs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+++...+||++||++++.+ +.|++++ +++++.+++.+++++||+|++++|+|.... ..++..|+++..++.
T Consensus 55 ~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~v~~ 130 (353)
T PRK05387 55 RLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYP----VYAGLYGIPYEEIPL 130 (353)
T ss_pred hcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHH----HHHHHcCCEEEEeec
Confidence 4566666789999999999863 3445555 559999999999999999999999996643 234455777777653
Q ss_pred C-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC-CCEEEEeCCCCCCCcccc---c-ccCCcEEE
Q 009167 283 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKA---L-SLGADLVL 352 (541)
Q Consensus 283 ~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~-gi~lIvDea~a~~~~~~~---~-~~gaDivv 352 (541)
+ |++++++ ++++|++++|+||||.+++.+++.++++.+ ++++|+||+|........ . ....++++
T Consensus 131 ~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~ 205 (353)
T PRK05387 131 DDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVV 205 (353)
T ss_pred CCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEE
Confidence 2 5666652 267899999999999999999999999875 999999999864321111 1 12456999
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcC-CCchHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCC
Q 009167 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 353 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G-~~~s~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p 428 (541)
.|+||.++.+| +..|++++++++++.++......+ ..++......+...++ .+....++..+++..+.+.|+++
T Consensus 206 ~S~SK~~~~~G-lR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~- 283 (353)
T PRK05387 206 QTFSKSRSLAG-LRVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL- 283 (353)
T ss_pred EehhHhhcchh-hhceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 99999998554 357999999999988877654332 2344444444333332 23344455556777788888876
Q ss_pred CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHH
Q 009167 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
++. + +|. .|+++++.+++ ....++.+.|...++.+... ..+
T Consensus 284 g~~-~-~~~----------------~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~~------~~~------------- 324 (353)
T PRK05387 284 GFE-V-LPS----------------KANFVFARHPS--HDAAELAAKLRERGIIVRHF------NKP------------- 324 (353)
T ss_pred CCe-E-CCC----------------cCcEEEEECCC--CCHHHHHHHHHHCCEEEEEC------CCC-------------
Confidence 332 2 232 35688888764 23455666665556655311 000
Q ss_pred HhcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009167 509 LKYGIMDNLVRFSFGVE-DFEDLKADVLQALH 539 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~e-~~edli~dL~~AL~ 539 (541)
+ .++++|||++.+ +.+.+++.|.+++.
T Consensus 325 ---~-~~~~iRis~~~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 325 ---R-IDQFLRITIGTDEEMEALVDALKEILA 352 (353)
T ss_pred ---C-CCCeEEEEeCCHHHHHHHHHHHHHHhh
Confidence 0 247899999853 33555555555543
No 125
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.91 E-value=3.7e-22 Score=212.78 Aligned_cols=271 Identities=15% Similarity=0.144 Sum_probs=183.3
Q ss_pred CchhHHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEE
Q 009167 208 GNPTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~--------e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
+.....++|+.+|++++. ++.+++++|++|+.+++.+++.+||+|+++.|+|.... ..+...|+++..
T Consensus 71 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~ 146 (403)
T TIGR01265 71 PSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYD----TRAAFSGLEVRL 146 (403)
T ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHHcCCEEEE
Confidence 345577899999999873 34666666779999999999999999999999998644 334456777776
Q ss_pred eCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc----c-c
Q 009167 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A-L 344 (541)
Q Consensus 280 vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~----~-~ 344 (541)
++. .|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... + .
T Consensus 147 ~~~~~~~~~~~d~~~l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 225 (403)
T TIGR01265 147 YDLLPEKDWEIDLDGLEALADE-KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMA 225 (403)
T ss_pred ecCCcccCCccCHHHHHHHhCc-CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchh
Confidence 642 368999998876 4899999999999999987 7789999999999999999987543211 1 1
Q ss_pred cc---CCcEEEECCccccCCCCCceEEEEEeC-h-H-----HHHHHHHHhhhcCCCchHHHHHHHHHhHH-----HHHHH
Q 009167 345 SL---GADLVLHSATKFIGGHNDVLAGSISGS-G-K-----LVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLR 409 (541)
Q Consensus 345 ~~---gaDivv~S~sK~lgg~gd~~gG~lv~~-~-~-----li~~l~~~~~~~G~~~s~~~a~l~l~~l~-----tl~~r 409 (541)
.+ ..-+++.|+||.++.+| ...|++++. + + +++.+..... .....+...+..+...++ .+...
T Consensus 226 ~~~~~~~vi~~~S~SK~~~~pG-lRiG~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 303 (403)
T TIGR01265 226 SFASIVPVLSLGGISKRWVVPG-WRLGWIIIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENTPQEFFDGK 303 (403)
T ss_pred hhccCCcEEEEeecccccCCCc-ceEEEEEEeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhChHHHHHHH
Confidence 11 12478899999987776 457888763 2 2 3333433322 112234444333333332 23344
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC----HHHHHHHHHHc-cCcCeecc
Q 009167 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL-KIPYIAPS 484 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~----~~~~~~~l~~L-~~~~iavS 484 (541)
.++..+++..+.+.|+.++.+. +..|. .|..+|++++.. ......+.+.+ +..++.+.
T Consensus 304 ~~~~~~~~~~l~~~L~~~~~~~-~~~p~----------------~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~ 366 (403)
T TIGR01265 304 ISVLKSNAELCYEELKDIPGLV-CPKPE----------------GAMYLMVKLELELFPEIKDDVDFCEKLVREESVICL 366 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCce-ecCCC----------------ceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEe
Confidence 5555667778888888765542 22332 577889998632 01234555553 45677777
Q ss_pred cCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009167 485 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 525 (541)
Q Consensus 485 ~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e 525 (541)
.|..+. .+++|||+++.+
T Consensus 367 pg~~f~-----------------------~~~~iRis~~~~ 384 (403)
T TIGR01265 367 PGSAFG-----------------------LPNWVRITITVP 384 (403)
T ss_pred CccccC-----------------------CCCeEEEEecCC
Confidence 765421 147899999964
No 126
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.91 E-value=1.9e-22 Score=214.20 Aligned_cols=282 Identities=17% Similarity=0.190 Sum_probs=187.7
Q ss_pred CCCCchh-HHHHHHHHHHHh----C----C--CcEEEeCCHH-HHHHHHHHHhccCCCE--EEEcCCCCcchHHHHHhhc
Q 009167 205 GRYGNPT-TVVVEEKMSALE----G----A--ESTVIMASGM-SASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVL 270 (541)
Q Consensus 205 ~R~~~p~-~~~Le~~LA~l~----g----~--e~~i~~sSGs-~Ai~~al~all~pGd~--Vlv~~~~y~~~~~~~~~~l 270 (541)
.+|+.+. ..+|++++|+++ | . ++.|++++|+ +++.+++.+++++||+ |+++.|+|..... .+
T Consensus 58 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~----~~ 133 (393)
T TIGR03538 58 STYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEG----AA 133 (393)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHH----HH
Confidence 3455443 578888888876 2 2 2356666665 9999999999999986 9999999987543 34
Q ss_pred ccCCeEEEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc
Q 009167 271 PKMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN 340 (541)
Q Consensus 271 ~~~Gi~v~~vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~ 340 (541)
...|+++..++. .|++++++++.+ ++|+|++++|+||||.+++ +++|+++|++||++||+||+|.....
T Consensus 134 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~ 212 (393)
T TIGR03538 134 LLAGAEPYFLNCTAENGFLPDFDAVPESVWR-RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYF 212 (393)
T ss_pred HhcCCeEEEeeccccCCCCCCHHHHHHHHhh-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhccc
Confidence 456777776653 267889888866 4999999999999999998 66888899999999999999875432
Q ss_pred c---cc---c----c-----cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH-
Q 009167 341 Q---KA---L----S-----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK- 404 (541)
Q Consensus 341 ~---~~---~----~-----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~- 404 (541)
. .+ . . ....+++.|+||.++.+| +..|++++++++++++.......+...+...+..+...+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~G-lRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 291 (393)
T TIGR03538 213 DEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPG-LRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWND 291 (393)
T ss_pred CCCCCCcCHHHhcccccccccccEEEEecchhhcCCcc-cceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC
Confidence 1 01 0 1 123488999999877666 5689999999999888776654454445544444333332
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCe
Q 009167 405 --TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYI 481 (541)
Q Consensus 405 --tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~i 481 (541)
.+....+...++...+.+.|+++ + .+..|. .|.++|++++.+ ..+|.+.| +..++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~L~~~--~-~~~~p~----------------gg~f~~~~~~~~---~~~~~~~l~~~~gV 349 (393)
T TIGR03538 292 EQHVRENRALYREKFAAVLEILGQV--L-DLELPD----------------AGFYLWPKVPGD---DEAFARALYEEENV 349 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh--C-cccCCC----------------eeEEEEEECCCC---HHHHHHHHHHHCCE
Confidence 23333334445566667777653 1 112221 577889999722 24566555 45688
Q ss_pred ecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009167 482 APSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 530 (541)
Q Consensus 482 avS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edl 530 (541)
.+..|..+..-... ..-..++||||++. +.+++
T Consensus 350 ~v~pg~~f~~~~~~---------------~~~~~~~~Ris~~~-~~~~l 382 (393)
T TIGR03538 350 TVLPGRFLAREAEG---------------VNPGEGRVRIALVA-PLEEC 382 (393)
T ss_pred EEeCCccccccccC---------------CCCCCCEEEEEecC-CHHHH
Confidence 88888654320000 00124689999986 34443
No 127
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.91 E-value=1.6e-22 Score=212.04 Aligned_cols=282 Identities=17% Similarity=0.193 Sum_probs=187.9
Q ss_pred CCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC
Q 009167 206 RYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~ 283 (541)
+|+.+....||++||++++.+ +.|++++|+ +++..++..+ .+|+ +++..|.|.... ..++..|+++..++..
T Consensus 51 ~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~----~~~~~~g~~~~~v~~~ 124 (356)
T PRK08056 51 RYPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYR----RALQQVGCEIRRYSLR 124 (356)
T ss_pred cCcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHH----HHHHHcCCeEEEEecc
Confidence 456666889999999999873 455565665 8998888876 6776 666788887643 3445568887777532
Q ss_pred -----CH-HHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc-----cc-ccCC
Q 009167 284 -----DM-EGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-----AL-SLGA 348 (541)
Q Consensus 284 -----d~-e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~-----~~-~~ga 348 (541)
++ +++.+.+.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|....... .. ....
T Consensus 125 ~~~~~~~~~~~~~~~~~-~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 203 (356)
T PRK08056 125 EADGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPH 203 (356)
T ss_pred cccCCCccHHHHHhccC-CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCC
Confidence 22 355566665 5999999999999999999 7788999999999999999986543211 11 2346
Q ss_pred cEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKIL 424 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L 424 (541)
++++.|+||+++.+| .+.|++++ ++++++.++..... ...+...+..+...++ .+....++..++++.+.+.|
T Consensus 204 ~i~~~S~SK~~~~~G-~RiG~~v~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L 280 (356)
T PRK08056 204 LWVLRSLTKFYAIPG-LRLGYLVNSDDAAVARMRRQQMP--WSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQAL 280 (356)
T ss_pred EEEEEechhhccCcc-hhheeeecCCHHHHHHHHHhCCC--CchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999666 45788887 45677777654322 2334444444333332 22233344556777788888
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCC
Q 009167 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 504 (541)
Q Consensus 425 ~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~ 504 (541)
++.+.+. + +|. .|+.+|+.++.+ ...|.+.|...++.+..|..+.
T Consensus 281 ~~~~~~~-~-~~~----------------~~~~~~~~~~~~---~~~~~~~l~~~gI~v~~~~~f~-------------- 325 (356)
T PRK08056 281 CALPLLT-V-WPG----------------RANYLFLRCERP---DIDLQRALLTQRILIRSCANYP-------------- 325 (356)
T ss_pred hcCCCcE-E-cCC----------------CCcEEEEEcCCC---hHHHHHHHHHCCeEEEECCCCC--------------
Confidence 7765542 2 221 366788888632 2355666655677777664321
Q ss_pred HHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009167 505 QSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 539 (541)
Q Consensus 505 ~~~~~~~gi~~~~IRlSvG~-e~~edli~dL~~AL~ 539 (541)
+...++|||+++. ++.+.+++.|.+.++
T Consensus 326 -------~~~~~~iRis~~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 326 -------GLDSRYYRVAIRSAAENERLLAALRNVLT 354 (356)
T ss_pred -------CCCCCEEEEEEcCHHHHHHHHHHHHHHHc
Confidence 1235699999997 456667777766543
No 128
>PLN00175 aminotransferase family protein; Provisional
Probab=99.91 E-value=1e-21 Score=210.19 Aligned_cols=272 Identities=16% Similarity=0.164 Sum_probs=184.2
Q ss_pred hHHHHHHHHHHHh----CC----CcEEEeCC-HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALE----GA----ESTVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----e~~i~~sS-Gs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+||+.+++++ |. +..|++++ +++|+.+++.+++++||+|++++|.|..... .++..|.++..++
T Consensus 92 G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~ 167 (413)
T PLN00175 92 GVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA----TLSMAGAKIKTVT 167 (413)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHH----HHHHcCCEEEEEE
Confidence 3567888888766 32 22355555 5699999999999999999999999987543 3445677777765
Q ss_pred C------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc----ccc---
Q 009167 282 P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----ALS--- 345 (541)
Q Consensus 282 ~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~----~~~--- 345 (541)
. .|+++|++++.+ ++|+|++++|+||||.+++ +++|+++|++||++||+||+|....... ...
T Consensus 168 ~~~~~~~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~ 246 (413)
T PLN00175 168 LRPPDFAVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPG 246 (413)
T ss_pred CCcccCCCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCC
Confidence 3 268999999877 4999999999999999997 6678899999999999999987543211 111
Q ss_pred -cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q 009167 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRM 420 (541)
Q Consensus 346 -~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~a~~l 420 (541)
.+..|++.|+||.++.+| ...||+++++++++.+...........+....+++...++. +....+...++++.+
T Consensus 247 ~~~~vi~i~SfSK~~~~~G-~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l 325 (413)
T PLN00175 247 MYERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDIL 325 (413)
T ss_pred CcCcEEEEecchhhccCcc-hheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 234689999999998555 45799999999999888766544444555555554545532 333344555677778
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-CHHHHHHHHHHc-cCcCeecccCCcccccccCccc
Q 009167 421 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 421 a~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~ 498 (541)
.+.|+++. +. +..|. .|.++|+.+.. +......|.+.| +..++.+..|..+..-
T Consensus 326 ~~~L~~~g-~~-~~~p~----------------g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~------ 381 (413)
T PLN00175 326 VEGLKEVG-FK-VYPSS----------------GTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLN------ 381 (413)
T ss_pred HHHHHHCC-Ce-ecCCC----------------eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCC------
Confidence 88888752 32 22221 34457887742 211234566655 3457777666543110
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecC
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
.+..+++|||+++.
T Consensus 382 ------------~~~~~~~iRls~~~ 395 (413)
T PLN00175 382 ------------PEDGKNLVRFAFCK 395 (413)
T ss_pred ------------CCCCCCEEEEEEcC
Confidence 00125789999996
No 129
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.91 E-value=3.4e-22 Score=208.99 Aligned_cols=288 Identities=16% Similarity=0.134 Sum_probs=196.5
Q ss_pred hhHHHHHHHHHHHhCCC--c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----
Q 009167 210 PTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e--~-~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
...+++++.+++++|.+ + .++++||++|+.+++.+++++||+|+++.+.|.+.. +...++..|.++++++.
T Consensus 32 ~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 109 (356)
T cd06451 32 ALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDR--WADMAERYGADVDVVEKPWGE 109 (356)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHH--HHHHHHHhCCCeEEeecCCCC
Confidence 44789999999999973 3 456777799999999999999999999988887631 22345566777777753
Q ss_pred -CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCccccC
Q 009167 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIG 360 (541)
Q Consensus 283 -~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~sK~lg 360 (541)
.|++++++.++++++++|++++|+||+|.+.|+++|.++|+++|+++++|++++.+. ..+....++|+++.|++|+++
T Consensus 110 ~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~ 189 (356)
T cd06451 110 AVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALG 189 (356)
T ss_pred CCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhcc
Confidence 378999999976359999999999999999999999999999999999999976432 344445689999999999999
Q ss_pred CCCCceEEEEEeChHHHHHHHH---Hhh----------------hcCCCchHHHHHHHHHhHHH-----HHHHHHHHHHH
Q 009167 361 GHNDVLAGSISGSGKLVTQIRN---LHH----------------VLGGALNPNAAYLIIRGMKT-----LHLRVQQQNST 416 (541)
Q Consensus 361 g~gd~~gG~lv~~~~li~~l~~---~~~----------------~~G~~~s~~~a~l~l~~l~t-----l~~r~~~~~~~ 416 (541)
++.+ +|+++.++++++.+.. ... ..+++.++...+.+..+++. +....++..++
T Consensus 190 ~p~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~ 267 (356)
T cd06451 190 APPG--LGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRL 267 (356)
T ss_pred CCCC--cceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 7642 6899999888777653 000 11222333322222233332 22334444566
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCc-CeecccCCcccccccC
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIVDQP 495 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~-~iavS~G~~~sl~~~p 495 (541)
+.++.+.|++. .+. +..+ +. ...+.++++.++.+ .....+.+.|... ++.++.|.. +
T Consensus 268 ~~~l~~~L~~~-g~~-~~~~--~~-----------~~~~~~~~~~~~~~-~~~~~~~~~L~~~~gI~~~~g~~------~ 325 (356)
T cd06451 268 AKALREGLEAL-GLK-LLAK--PE-----------LRSPTVTAVLVPEG-VDGDEVVRRLMKRYNIEIAGGLG------P 325 (356)
T ss_pred HHHHHHHHHHc-CCe-eccC--cc-----------cCCCceEEEECCCC-CCHHHHHHHHHHhCCEEEecccc------c
Confidence 77777777764 232 2111 00 01234556666532 2345667777655 666655421 0
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
...+.||+|++..++++.++.+.++|++
T Consensus 326 -----------------~~~~~iRis~~~~~~~e~v~~~~~~l~~ 353 (356)
T cd06451 326 -----------------TAGKVFRIGHMGEATREDVLGVLSALEE 353 (356)
T ss_pred -----------------ccCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 0236899999988877777888777764
No 130
>PRK08912 hypothetical protein; Provisional
Probab=99.91 E-value=3.7e-22 Score=211.49 Aligned_cols=278 Identities=17% Similarity=0.181 Sum_probs=184.9
Q ss_pred CCCCch-hHHHHHHHHHHHh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009167 205 GRYGNP-TTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~----g~----e-~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~G 274 (541)
.+|+.+ ...+||+++++++ |. + +.++++++++++.+++.+++++||+|+++.|+|+.... .++..|
T Consensus 57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g 132 (387)
T PRK08912 57 NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP----LIRRAG 132 (387)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH----HHHHcC
Confidence 445554 3568888888875 32 3 44555555699999999999999999999999987543 345567
Q ss_pred eEEEEeCC------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----
Q 009167 275 ITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 275 i~v~~vd~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~---- 341 (541)
+++..++. .|++++++.+.+ ++++|++++|+||||.+++ +++|.++|+++++++|+|++|......
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 211 (387)
T PRK08912 133 GVPRLVRLEPPHWRLPRAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRH 211 (387)
T ss_pred CEEEEEecCcccCcCCHHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCC
Confidence 77766643 268999998876 4999999999999999998 567889999999999999997643211
Q ss_pred cc---c-c-cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH----HHHHHHHHH
Q 009167 342 KA---L-S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQ 412 (541)
Q Consensus 342 ~~---~-~-~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l----~tl~~r~~~ 412 (541)
.+ . . .+.++++.|+||.+|.+| ...|++++++++++.+.......+...++.....+...+ +.+....++
T Consensus 212 ~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 290 (387)
T PRK08912 212 IPLMTLPGMRERTVKIGSAGKIFSLTG-WKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRAD 290 (387)
T ss_pred cChhhCCCccCceEEEeechhhccCcC-ceeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHH
Confidence 11 1 1 245799999999998555 467999999999988876655433333333332222222 222333344
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-C-HHHHHHHHHHc-cCcCeecccCCcc
Q 009167 413 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-D-LTATIKFIDAL-KIPYIAPSFGGCE 489 (541)
Q Consensus 413 ~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-~-~~~~~~~l~~L-~~~~iavS~G~~~ 489 (541)
..++++.+.+.|+++. +. +..|. .|.++|+.++. + .....+|.+.+ +..++.+..|..+
T Consensus 291 ~~~~~~~l~~~L~~~g-~~-~~~~~----------------g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 352 (387)
T PRK08912 291 LARSRDRLAAGLRRIG-FP-VLPSQ----------------GTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAF 352 (387)
T ss_pred HHHHHHHHHHHHHhCC-Cc-ccCCC----------------cceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhh
Confidence 5566777778887652 21 21111 34467888863 1 12345566654 4567777776543
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009167 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 525 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e 525 (541)
... +-..+++||+++..
T Consensus 353 ~~~-------------------~~~~~~iRl~~~~~ 369 (387)
T PRK08912 353 YEE-------------------DPVTSVVRFCFAKR 369 (387)
T ss_pred CCC-------------------CCCCCEEEEEEeCC
Confidence 210 01247999999974
No 131
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.91 E-value=3.8e-22 Score=211.91 Aligned_cols=285 Identities=13% Similarity=0.139 Sum_probs=186.6
Q ss_pred hHHHHHHHHHHHhC----C-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALEG----A-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g----~-----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+|+++++++++ . +++++++++++|+.+++.+++.+||+|++++|+|.+.... ++..|+++..++
T Consensus 68 g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~~~ 143 (391)
T PRK07309 68 GLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPI----VNLVGAEIVEID 143 (391)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHH----HHHcCCEEEEEe
Confidence 46788888888763 2 2455555667999999999999999999999999986533 344677777765
Q ss_pred C------CCHHHHHHhccC--CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-----ccc-
Q 009167 282 P------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL- 344 (541)
Q Consensus 282 ~------~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-----~~~- 344 (541)
. .|++++++++++ .++++|++++|+||||.+++ +++|+++|++||+++|+|++|...... ...
T Consensus 144 ~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~ 223 (391)
T PRK07309 144 TTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAE 223 (391)
T ss_pred cCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHH
Confidence 3 268899988864 24899999999999999987 778889999999999999998754321 111
Q ss_pred -ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----HHHHHHHHHHHHHH
Q 009167 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALR 419 (541)
Q Consensus 345 -~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~a~~ 419 (541)
.....+++.|+||.+|.+| +..|++++++++++.+...........+......+...++. .....++..+++..
T Consensus 224 ~~~~~~i~~~S~SK~~g~~G-lRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (391)
T PRK07309 224 YLPDQTILINGLSKSHAMTG-WRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDY 302 (391)
T ss_pred hccCCEEEEecChhhccCcc-ceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Confidence 1234589999999998565 56899999999998887654433333444444444444432 11112333455666
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-HHHHHHHHH-ccCcCeecccCCcccccccCcc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDA-LKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-~~~~~~l~~-L~~~~iavS~G~~~sl~~~pa~ 497 (541)
+.+.|+++. + .+..|. .|..+|+.++.+. .....+.+. ++..++.+..|..+..
T Consensus 303 ~~~~l~~~~-~-~~~~p~----------------gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~------ 358 (391)
T PRK07309 303 IIEKMTDLG-F-KIIKPD----------------GAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGP------ 358 (391)
T ss_pred HHHHHHHCC-C-eecCCC----------------eeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCC------
Confidence 667777652 2 122221 3445688876421 123344544 2345777776654310
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009167 498 MSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~ 539 (541)
..++++||+++.+ +.++.++.|.+.++
T Consensus 359 ---------------~~~~~iRi~~~~~~~~l~~~i~~l~~~~~ 387 (391)
T PRK07309 359 ---------------YGEGYVRLSYAASMETIKEAMKRLKEYME 387 (391)
T ss_pred ---------------CCCCEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1257999999863 23444555555554
No 132
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.91 E-value=1.2e-21 Score=198.44 Aligned_cols=313 Identities=20% Similarity=0.198 Sum_probs=213.3
Q ss_pred cccCChHHHHHHHhc--ccCCCccCCCCch-hHHHHHHHHHHHhCC---CcEEEeCCH-HHHHHHHHHHhccCCCEEEEc
Q 009167 183 YFFKKTAELIDFKEK--RRASFEYGRYGNP-TTVVVEEKMSALEGA---ESTVIMASG-MSASTVMLLALVPAGGHIVTT 255 (541)
Q Consensus 183 ~~~~~~~~~~~~~~~--~~~~~~Y~R~~~p-~~~~Le~~LA~l~g~---e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~ 255 (541)
..|+.+..+.+.... .++.|.|+ +.+. ..+++.+...+.++. ++.++++.| +.++..+++.+.++||.|++.
T Consensus 35 MDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~ 113 (388)
T COG1168 35 MDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQ 113 (388)
T ss_pred ccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEec
Confidence 345555444433322 35678888 5544 788888888888875 345666655 599999999999999999999
Q ss_pred CCCCcchHHHHHhhcccCCeEEEEeCC--------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHh
Q 009167 256 TDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK 324 (541)
Q Consensus 256 ~~~y~~~~~~~~~~l~~~Gi~v~~vd~--------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~ 324 (541)
.|.|++.++.+ +..|.++...+. .|.++||+++.+.+++++++|+|+||+|++.. +.+|.++|.+
T Consensus 114 tPvY~PF~~~i----~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~k 189 (388)
T COG1168 114 TPVYPPFYNAI----KLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLR 189 (388)
T ss_pred CCCchHHHHHH----hhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHH
Confidence 99999977554 334555554432 28999999998766899999999999999986 7788999999
Q ss_pred CCCEEEEeCCCCCCCccc-------cc-cc--CCcEEEECCccccCCCCCceEEEEEeChHHHHHHH-HHhhhcCCCchH
Q 009167 325 KGAIVCIDGTFATPLNQK-------AL-SL--GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR-NLHHVLGGALNP 393 (541)
Q Consensus 325 ~gi~lIvDea~a~~~~~~-------~~-~~--gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~-~~~~~~G~~~s~ 393 (541)
||++||.||.++..+... .+ .. ..-+.+.|.||.|+-.|...+-+++.++++.++.. .+.......++.
T Consensus 190 h~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~ 269 (388)
T COG1168 190 HGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSA 269 (388)
T ss_pred cCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCch
Confidence 999999999977643221 11 11 23478889999999776444456666777655543 333333333443
Q ss_pred HHHH---HH-HHhHHHHHHHHHHHHHHHHHHHHHHHhC-CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC---C
Q 009167 394 NAAY---LI-IRGMKTLHLRVQQQNSTALRMAKILEAH-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---D 465 (541)
Q Consensus 394 ~~a~---l~-l~~l~tl~~r~~~~~~~a~~la~~L~~~-p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~---~ 465 (541)
+... .+ ..+-..|....+-...|...+.+.|.++ |+|+ +.-|. +..++|+++.. +
T Consensus 270 lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~-v~~p~----------------gTYL~WLD~r~l~l~ 332 (388)
T COG1168 270 LGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVK-VTEPQ----------------GTYLAWLDCRELGLD 332 (388)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EecCC----------------CceeeeeeccccCCC
Confidence 3222 11 2344456666677778999999999876 6764 43342 34588998864 2
Q ss_pred HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009167 466 LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 540 (541)
Q Consensus 466 ~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~~ 540 (541)
.....+++. ...+++++.|..|.- -..+++|+.++.. ..++-+++|.++|+.
T Consensus 333 d~~l~~~ll--~~akVal~~G~~FG~---------------------~g~gf~RlN~acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 333 DSELAEFLL--EEAKVALSPGSTFGE---------------------EGSGFVRLNFACPRAILEEALERLKRALKK 386 (388)
T ss_pred hHHHHHHHH--HhhcEeccCCCccCc---------------------CCCceEEEecCCCHHHHHHHHHHHHHHHhc
Confidence 234445543 234678888865421 1368999999974 457777888888765
No 133
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.91 E-value=5.3e-22 Score=214.67 Aligned_cols=284 Identities=18% Similarity=0.209 Sum_probs=198.8
Q ss_pred hhHHHHHHHHHHHh----CC---CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 210 PTTVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g~---e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
.....||+.|++++ |. .+.|+.|+|+ +|+.++++.+++|||.|++.+|+|.+..+ .++..|+++..++
T Consensus 132 ~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~----~~~~~g~~~~~vp 207 (459)
T COG1167 132 AGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ----ALEALGARVIPVP 207 (459)
T ss_pred CCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH----HHHHcCCcEEecC
Confidence 44556777777765 32 2456666666 99999999999999999999999999764 4455677777775
Q ss_pred CC----CHHHHHHhccCCCceEEEEeCCC--CCCCccccHH---HHHHHHHhCCCEEEEeCCCCCCCcc-------ccc-
Q 009167 282 PA----DMEGLEAALNNNNVSLFFTESPT--NPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQ-------KAL- 344 (541)
Q Consensus 282 ~~----d~e~Le~al~~~~tklV~lesP~--NPtG~i~dl~---~Ia~la~~~gi~lIvDea~a~~~~~-------~~~- 344 (541)
.+ |+++|++.+++.++|++|+ +|+ ||||.+++++ +|.++|++||+++|+|+.|+..... ..+
T Consensus 208 ~d~~G~~~e~le~~~~~~~~k~~y~-~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld 286 (459)
T COG1167 208 VDEDGIDPEALEEALAQWKPKAVYV-TPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALD 286 (459)
T ss_pred CCCCCCCHHHHHHHHhhcCCcEEEE-CCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhC
Confidence 43 8999999998767999998 664 9999999976 8999999999999999998753221 111
Q ss_pred ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHH----Hh-HHHHHHHHHHHH-HHHH
Q 009167 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII----RG-MKTLHLRVQQQN-STAL 418 (541)
Q Consensus 345 ~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l----~~-l~tl~~r~~~~~-~~a~ 418 (541)
..+..|++.||||.+.++- ..||+++++++++++...........+.+.+..+. .+ ++..-.++++.. +..+
T Consensus 287 ~~~rViy~gSFSK~l~Pgl--RlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~ 364 (459)
T COG1167 287 APGRVIYLGSFSKTLAPGL--RLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRD 364 (459)
T ss_pred CCCCEEEEeeehhhccccc--ceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 2366799999999999764 68999999999999887666555555544422222 22 333333443333 4556
Q ss_pred HHHHHHHhC-CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeeccc-CCcccccccCc
Q 009167 419 RMAKILEAH-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF-GGCESIVDQPA 496 (541)
Q Consensus 419 ~la~~L~~~-p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~-G~~~sl~~~pa 496 (541)
.+.+.|+++ |....+..|. .|-++|++++.+ .+...++..+...++.+.. |..+..-
T Consensus 365 ~l~~~L~~~~~~~~~~~~p~----------------gG~flwl~l~~~-~~~~~l~~~a~~~gv~i~~~g~~f~~~---- 423 (459)
T COG1167 365 ALLEALAEYLPELATWTRPE----------------GGLFLWLELPEG-IDARELLAAALEKGVVVTPLGSAFSAD---- 423 (459)
T ss_pred HHHHHHHHhCCCCeeeecCC----------------ceEEEEEEcCCC-CCHHHHHHHHHHCCCEEEcCCccccCC----
Confidence 677788776 3344444442 467899999865 3455666666666776666 5443220
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHH
Q 009167 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQ 536 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~ 536 (541)
+-..+.+||+++..+.+++.+.+..
T Consensus 424 ---------------~~~~~~~Rl~~s~~~~e~i~~gi~~ 448 (459)
T COG1167 424 ---------------GDPRNGLRLSFSSPSEEEIEEGIKR 448 (459)
T ss_pred ---------------CCCCCeEEEEcCCCCHHHHHHHHHH
Confidence 0024689999998877766555543
No 134
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=2.2e-22 Score=212.12 Aligned_cols=281 Identities=18% Similarity=0.235 Sum_probs=190.1
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+++....|+++||+++|.+ +.|++++|+ +++..++.+++++||+|+++.|+|+... ..++..|+++..++.
T Consensus 66 ~~Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~----~~~~~~g~~~~~v~~ 141 (371)
T PRK05166 66 RLYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHE----DYPTMMGARVERVTV 141 (371)
T ss_pred hcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCeEEEeec
Confidence 4566666668999999999873 456666665 8999999999999999999999998754 334556888877754
Q ss_pred C-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHh--CCCEEEEeCCCCCCCcc----cc---cc-c-
Q 009167 283 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KA---LS-L- 346 (541)
Q Consensus 283 ~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~--~gi~lIvDea~a~~~~~----~~---~~-~- 346 (541)
+ |++++++++++ ++++|++++|+||||.+++.+++.++++. +++++|+||+|...... .. .. .
T Consensus 142 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 220 (371)
T PRK05166 142 TPDLGFDLDALCAAVAR-APRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARG 220 (371)
T ss_pred CCCCCCCHHHHHHhhhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcC
Confidence 2 68999998877 48999999999999999998777666653 47899999997643311 11 11 1
Q ss_pred CCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHH
Q 009167 347 GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAK 422 (541)
Q Consensus 347 gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~ 422 (541)
...+++.|+||.++-+| +..||++. ++++++.++.....++ .+.....++...+ +.+....+...++++.+.+
T Consensus 221 ~~vi~i~SfSK~~~l~G-lRiG~~i~~~~~l~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 297 (371)
T PRK05166 221 LPWIVLRTFSKAYGLAG-LRVGYGLVSDPELVGLLDRVRTPFN--VNGAAQAAALAALDDEEHLAKGVALALAERERLKK 297 (371)
T ss_pred CCEEEEeechHhhhcch-hheeeeecCCHHHHHHHHHhccCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 23588999999998555 45788665 6788887766543333 3433333323222 2334344455566777888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccC
Q 009167 423 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 423 ~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
.|+++ ++. + +|. .|+++|+.++.+ ..+|.+.|...++.+..|.. +
T Consensus 298 ~L~~~-g~~-~-~p~----------------~g~fl~~~~~~~---~~~l~~~l~~~gi~v~p~~~------~------- 342 (371)
T PRK05166 298 ELAEM-GYR-I-APS----------------RANFLFFDARRP---ASAVAEALLRQGVIVKPWKQ------P------- 342 (371)
T ss_pred HHHHC-cCe-e-CCC----------------cCCEEEEeCCCC---HHHHHHHHHHCCeEEecCCC------C-------
Confidence 88876 232 2 221 467888887532 34566666555777665521 0
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHH
Q 009167 503 LSQSERLKYGIMDNLVRFSFGVED-FEDLKADVLQAL 538 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~e~-~edli~dL~~AL 538 (541)
+ .+++|||+++..+ .+++++.|+..+
T Consensus 343 ---------~-~~~~iRi~~~~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 343 ---------G-FETFIRVSIGSPEENDHFVAALDKVL 369 (371)
T ss_pred ---------C-CCCeEEEEcCCHHHHHHHHHHHHHHh
Confidence 1 2578999999754 455666555543
No 135
>PRK09105 putative aminotransferase; Provisional
Probab=99.91 E-value=3.4e-22 Score=210.83 Aligned_cols=278 Identities=18% Similarity=0.226 Sum_probs=183.2
Q ss_pred CCCCchhHHHHHHHHHHHhCC-CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~-e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
++|+.+...+|++.||+++|. .+.|++++| ++++.+++.+++++||+|++++|+|..... .++..|+++..++.
T Consensus 73 ~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~----~~~~~g~~~~~v~~ 148 (370)
T PRK09105 73 GRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWR----AADAQGAPVAKVPL 148 (370)
T ss_pred cCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHH----HHHHcCCeEEEecC
Confidence 456666788999999999986 244555555 599999999999999999999999987643 34556787777653
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHh--CCCEEEEeCCCCCCCcc----ccccc-CCcE
Q 009167 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KALSL-GADL 350 (541)
Q Consensus 283 -----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~--~gi~lIvDea~a~~~~~----~~~~~-gaDi 350 (541)
.|++++++. .+ ++++|++++||||||.+++.++|.++++. +++++|+||+|...... +..+. ...+
T Consensus 149 ~~~~~~d~~~l~~~-~~-~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi 226 (370)
T PRK09105 149 RADGAHDVKAMLAA-DP-NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLI 226 (370)
T ss_pred CCCCCCCHHHHHhc-CC-CCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEE
Confidence 367888776 34 48999999999999999998888877653 48999999998543211 11111 2347
Q ss_pred EEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 351 vv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
++.|+||.+|..| ...|++++++++++.++.. . ....+......+...+ +.+....+...++++.+.+.|+++
T Consensus 227 ~~~SfSK~~g~~G-lRiG~~v~~~~~i~~l~~~-~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 302 (370)
T PRK09105 227 VLRTFSKLYGMAG-MRLGLAAARPDLLAKLARF-G--HNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK 302 (370)
T ss_pred EEecccHhhcCCc-cceeeeecCHHHHHHHHhc-C--CCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8899999998776 4579999999999888765 2 1223333333333333 223333445556677777888765
Q ss_pred CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHH
Q 009167 428 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 507 (541)
Q Consensus 428 p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~ 507 (541)
++. + +| ..|+++.+.++.+ ..++.+.|...++.+ |..+ +
T Consensus 303 -g~~-~-~~----------------~~~~f~~~~~~~~---~~~l~~~L~~~gI~v--~~~~-----~------------ 341 (370)
T PRK09105 303 -GYK-C-TP----------------SQANCFMVDVKRP---AKAVADAMAKQGVFI--GRSW-----P------------ 341 (370)
T ss_pred -CCC-c-CC----------------CCCcEEEEeCCCC---HHHHHHHHHHCCcEE--ecCC-----C------------
Confidence 221 1 11 1356777776532 345555554446555 3211 0
Q ss_pred HHhcCCCCCeEEEEecCCC-HHHHHHHHHHHH
Q 009167 508 RLKYGIMDNLVRFSFGVED-FEDLKADVLQAL 538 (541)
Q Consensus 508 ~~~~gi~~~~IRlSvG~e~-~edli~dL~~AL 538 (541)
..++++||+++.++ .+.+++.|++.+
T Consensus 342 -----~~~~~~Ris~~~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 342 -----IWPNWVRVTVGSEEEMAAFRSAFAKVM 368 (370)
T ss_pred -----CCCCeEEEEcCCHHHHHHHHHHHHHHh
Confidence 12578999999642 344555555443
No 136
>PRK09148 aminotransferase; Validated
Probab=99.91 E-value=6.5e-22 Score=211.08 Aligned_cols=284 Identities=14% Similarity=0.126 Sum_probs=185.2
Q ss_pred CCCCch-hHHHHHHHHHHHh----CC----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009167 205 GRYGNP-TTVVVEEKMSALE----GA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~----g~----e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~G 274 (541)
.+|+.+ ...+||+++|+++ |. ++.|++++| ++++.+++..++.+||+|++++|+|...... +...|
T Consensus 62 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~g 137 (405)
T PRK09148 62 HRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFG----FIMAG 137 (405)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHH----HHhcC
Confidence 455544 3568888888876 42 324555555 5999999999999999999999999986433 34468
Q ss_pred eEEEEeCCC----CHHHHHHhcc---CCCceEEEEeCCCCCCCccccH---HHHHHHHHhCCCEEEEeCCCCCCCcc---
Q 009167 275 ITATVIDPA----DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (541)
Q Consensus 275 i~v~~vd~~----d~e~Le~al~---~~~tklV~lesP~NPtG~i~dl---~~Ia~la~~~gi~lIvDea~a~~~~~--- 341 (541)
+++..++.. .+++++++++ + ++++|++++||||||.+++. ++|.++|+++|++||+||+|......
T Consensus 138 ~~v~~v~~~~~~~~~~~l~~~~~~~~~-~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (405)
T PRK09148 138 GVIRSVPAEPDEEFFPALERAVRHSIP-KPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNP 216 (405)
T ss_pred CEEEEEeCCCCCCCccCHHHHHhhccc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCC
Confidence 887777532 3444555443 3 58999999999999999996 57888999999999999998753211
Q ss_pred --cccc----cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHH
Q 009167 342 --KALS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQ 411 (541)
Q Consensus 342 --~~~~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~ 411 (541)
.... .+..+++.|+||.++.+| .+.||+++++++++.+...........+......+...++ .+....+
T Consensus 217 ~~s~~~~~~~~~~~i~~~SfSK~~~~pG-lR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~ 295 (405)
T PRK09148 217 PPSVLQVPGAKDVTVEFTSMSKTFSMAG-WRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRE 295 (405)
T ss_pred CCChhhCCCccCcEEEEeccccccCCcc-hheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHH
Confidence 1111 123467899999998666 5689999999999988876654443333333333333332 2233334
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH--HHHHHHHHHc-cCcCeecccCCc
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDAL-KIPYIAPSFGGC 488 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~--~~~~~~l~~L-~~~~iavS~G~~ 488 (541)
...+++..+.+.|+++. + .+..|. .|.++|+.++... ....+|.+.+ +..++.+..|..
T Consensus 296 ~~~~~r~~l~~~L~~~~-~-~~~~p~----------------~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~ 357 (405)
T PRK09148 296 LYKKRRDVLVESFGRAG-W-DIPPPA----------------ASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVG 357 (405)
T ss_pred HHHHHHHHHHHHHHHcC-C-ccCCCC----------------eeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchh
Confidence 44566677777887642 2 111121 4667899987421 1234555543 356777777754
Q ss_pred ccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009167 489 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL 534 (541)
+.. ..++++||+++ ++.+++.+.|
T Consensus 358 f~~---------------------~~~~~~Ri~~~-~~~~~l~~al 381 (405)
T PRK09148 358 FGE---------------------HGDGYVRIALV-ENEQRIRQAA 381 (405)
T ss_pred hCC---------------------CCCCeEEEEec-CCHHHHHHHH
Confidence 311 02478999998 4555544443
No 137
>PRK09265 aminotransferase AlaT; Validated
Probab=99.91 E-value=8.5e-22 Score=210.06 Aligned_cols=289 Identities=13% Similarity=0.096 Sum_probs=181.4
Q ss_pred CCCchh-HHHHHHHHHHHh------CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE
Q 009167 206 RYGNPT-TVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 206 R~~~p~-~~~Le~~LA~l~------g~-e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
+|+.+. ...|++.+|+++ +. .+.|++++|+ +++.+++.+++++||+|++++|+|......+ ...|..
T Consensus 67 ~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~ 142 (404)
T PRK09265 67 GYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAV----SLSGGK 142 (404)
T ss_pred CCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHH----HHcCCE
Confidence 344443 468999999987 33 2456666665 8899999999999999999999998755433 334555
Q ss_pred EEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-----
Q 009167 277 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (541)
Q Consensus 277 v~~vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----- 341 (541)
+..++. .|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|++||+||+|......
T Consensus 143 ~v~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 221 (404)
T PRK09265 143 PVHYLCDEEAGWFPDLDDIRSKITP-RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHI 221 (404)
T ss_pred EEEEecccccCCCCCHHHHHHhccc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcC
Confidence 444321 368899998876 4999999999999999999 888999999999999999997643211
Q ss_pred ccccc---CCcEEEECCccccCCCCCceEEEEEe--ChHH----HHHHHHHhhhcCCCchHHHHHHHHHhHH---HHHHH
Q 009167 342 KALSL---GADLVLHSATKFIGGHNDVLAGSISG--SGKL----VTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLR 409 (541)
Q Consensus 342 ~~~~~---gaDivv~S~sK~lgg~gd~~gG~lv~--~~~l----i~~l~~~~~~~G~~~s~~~a~l~l~~l~---tl~~r 409 (541)
....+ ...+++.|+||.++.+| +..|+++. ++++ ++.+... .......+.....++...+. .+...
T Consensus 222 ~~~~~~~~~~vi~~~S~SK~~~~pG-lRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 299 (404)
T PRK09265 222 SIASLAPDLLCVTFNGLSKAYRVAG-FRVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINEL 299 (404)
T ss_pred CHHHcCCCceEEEEecchhhccCcc-cceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHH
Confidence 11111 12467899999997666 45788874 4443 3333222 11122233333333333332 11111
Q ss_pred ---HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH----HHHHHHHHHccCcCee
Q 009167 410 ---VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL----TATIKFIDALKIPYIA 482 (541)
Q Consensus 410 ---~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~----~~~~~~l~~L~~~~ia 482 (541)
.++..+++..+.+.|++++.+. +..|. .|.++|+.++... ...+.+.+.+...++.
T Consensus 300 ~~~~~~~~~~r~~~~~~L~~~~~~~-~~~p~----------------~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~ 362 (404)
T PRK09265 300 ILPGGRLYEQRDRAWELLNAIPGVS-CVKPK----------------GALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVL 362 (404)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCc-ccCCC----------------cceEEEEEecccccCCCCHHHHHHHHHHhCCEE
Confidence 1234455666777777665432 22221 4668888886421 1233445556666777
Q ss_pred cccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009167 483 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 539 (541)
Q Consensus 483 vS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~--e~~edli~dL~~AL~ 539 (541)
+..|..+.. ..++++||+++. |..++.++.|.++|+
T Consensus 363 v~pg~~F~~---------------------~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~ 400 (404)
T PRK09265 363 LVQGTGFNW---------------------PEPDHFRIVTLPRVDDLEEAIGRIGRFLS 400 (404)
T ss_pred EECchhhCC---------------------CCCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 777654311 124789999974 234455666666654
No 138
>PRK09082 methionine aminotransferase; Validated
Probab=99.91 E-value=7.4e-22 Score=209.26 Aligned_cols=274 Identities=17% Similarity=0.131 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHhCC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC---
Q 009167 212 TVVVEEKMSALEGA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 212 ~~~Le~~LA~l~g~----e-~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
.+.+.+.+.+++|. + +.+++++|++|+.+++.+++.+||+|++++|+|......+ +..|.++..++.+
T Consensus 73 r~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~----~~~g~~~~~~~~~~~~ 148 (386)
T PRK09082 73 REAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAI----ELAGGRAVRVALQPPD 148 (386)
T ss_pred HHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEEecCccc
Confidence 34445555555665 2 3444455569999999999999999999999999865443 3457777766542
Q ss_pred ---CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-----ccc---c-cCC
Q 009167 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL---S-LGA 348 (541)
Q Consensus 284 ---d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-----~~~---~-~ga 348 (541)
|++++++++++ ++++|++++|+||||.+++ +++|.++|++||+++|+|++|...... ... . .+.
T Consensus 149 ~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~ 227 (386)
T PRK09082 149 FRVDWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRER 227 (386)
T ss_pred ccCCHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCc
Confidence 78999999977 4999999999999999864 678899999999999999997643211 111 1 235
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKIL 424 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a~~la~~L 424 (541)
.+++.|+||.+|..| .+.|++++++++++.++..........+...+..+...++ .+....+...++...+.+.|
T Consensus 228 ~i~~~S~SK~~~~~G-~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L 306 (386)
T PRK09082 228 AFVVSSFGKTYHVTG-WKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAAL 306 (386)
T ss_pred EEEEeechhhccchh-hhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999997555 4579999999999888876544333344444333333332 22222334456677777888
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-CHHHHHHHHHHc-cCcCeecccCCcccccccCccccccC
Q 009167 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 425 ~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
+++ .+. + +|. ..|.++|+.++. .......|.+.| +..++.+..|+.+...
T Consensus 307 ~~~-~~~-~-~~~---------------~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~---------- 358 (386)
T PRK09082 307 ANS-RFK-L-LPC---------------EGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYAD---------- 358 (386)
T ss_pred HhC-CCc-c-cCC---------------CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCC----------
Confidence 763 221 1 111 134467888762 111234555543 4557777777543210
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009167 503 LSQSERLKYGIMDNLVRFSFGVEDFED 529 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~e~~ed 529 (541)
+...+++|||++. +.+.
T Consensus 359 ---------~~~~~~~Ri~~~~-~~~~ 375 (386)
T PRK09082 359 ---------PFPHRLVRLCFAK-QEET 375 (386)
T ss_pred ---------CCCCCEEEEEecC-CHHH
Confidence 1135789999997 4443
No 139
>PRK07683 aminotransferase A; Validated
Probab=99.91 E-value=1.8e-21 Score=206.35 Aligned_cols=276 Identities=14% Similarity=0.155 Sum_probs=182.1
Q ss_pred chhHHHHHHHHHHHh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEE
Q 009167 209 NPTTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~----g~----e-~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
.+...+||+.+|+++ |. + +.++++++++|+.+++..++++||+|+++.|+|...... ++..|+++.+
T Consensus 64 ~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~ 139 (387)
T PRK07683 64 NAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPI----IRLCGAKPVF 139 (387)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHH----HHHcCCEEEE
Confidence 455678999999887 32 2 445555556999999999999999999999999886543 3445888877
Q ss_pred eCCC------CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc---c-cc-
Q 009167 280 IDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LS- 345 (541)
Q Consensus 280 vd~~------d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~---~-~~- 345 (541)
++.+ |++++++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|....... + ..
T Consensus 140 ~~~~~~~~~~~~~~l~~~~~~-~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 218 (387)
T PRK07683 140 IDTRSTGFRLTAEALENAITE-KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHF 218 (387)
T ss_pred eecCcccCCCCHHHHHHhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhc
Confidence 7643 56889988876 4899999999999999987 6788999999999999999987543211 1 11
Q ss_pred ---cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHHH
Q 009167 346 ---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTAL 418 (541)
Q Consensus 346 ---~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a~ 418 (541)
.+..+++.|+||.+|.+| +..|++++++++++++...........+...+.++...++ .+....++..++++
T Consensus 219 ~~~~~~vi~~~s~SK~~~~pG-lRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 297 (387)
T PRK07683 219 PEMREKTIVINGLSKSHSMTG-WRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRD 297 (387)
T ss_pred cCCcCCeEEEeeccccccCcc-ceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 134688999999998555 5689999999999888765433223333333333333332 22222333445666
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHH-ccCcCeecccCCcccccccCcc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA-LKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~-L~~~~iavS~G~~~sl~~~pa~ 497 (541)
.+.+.|.+. .+. +..|. .|.+++..+++.......+... ++..++.+..|..+..
T Consensus 298 ~~~~~l~~~-~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~------ 353 (387)
T PRK07683 298 YVYNRLISM-GLD-VEKPT----------------GAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSE------ 353 (387)
T ss_pred HHHHHHHHc-CCc-ccCCC----------------eeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCC------
Confidence 677777654 221 11111 3445666665311122344433 4556777777654311
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009167 498 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 530 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edl 530 (541)
..++++||+++. +.+++
T Consensus 354 ---------------~~~~~~Ri~~~~-~~~~~ 370 (387)
T PRK07683 354 ---------------YGEGYVRLSYAY-SIETL 370 (387)
T ss_pred ---------------CCCCeEEEEecC-CHHHH
Confidence 125799999996 44433
No 140
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.91 E-value=5.3e-22 Score=206.78 Aligned_cols=304 Identities=17% Similarity=0.160 Sum_probs=208.8
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC--
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-- 283 (541)
+..+...++|++|++++|.+++++++||++|+..++.++ +++||+|+++.++|.++...+ ...|+++.+++.+
T Consensus 15 ~~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~ 90 (352)
T cd00616 15 TLGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAI----LLLGATPVFVDIDPD 90 (352)
T ss_pred cCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHH----HHcCCeEEEEecCCC
Confidence 346889999999999999988999999999999999988 689999999999999876443 3457887777532
Q ss_pred ----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc--ccccCCcEEEECCc-
Q 009167 284 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--ALSLGADLVLHSAT- 356 (541)
Q Consensus 284 ----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~--~~~~gaDivv~S~s- 356 (541)
|++++++++++ ++++|+++ |++|.+.|+++|.++|+++|+++|+|++++.+.... ......|+.+.|++
T Consensus 91 ~~~~d~~~l~~~i~~-~~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~ 166 (352)
T cd00616 91 TYNIDPELIEAAITP-RTKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHP 166 (352)
T ss_pred cCCcCHHHHHHhcCc-CCeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCC
Confidence 68999999976 59999984 578999999999999999999999999987654322 12223688999976
Q ss_pred -cccCCCCCceEEEEEeC-hHHHHHHHHHhhh---------------cCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 009167 357 -KFIGGHNDVLAGSISGS-GKLVTQIRNLHHV---------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALR 419 (541)
Q Consensus 357 -K~lgg~gd~~gG~lv~~-~~li~~l~~~~~~---------------~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~ 419 (541)
|+++++. ||+++.+ +++.++++..... +...+++..+++.+..++.+....++..++++.
T Consensus 167 ~K~~~~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~ 243 (352)
T cd00616 167 TKNLTTGE---GGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAER 243 (352)
T ss_pred CCCCcccC---ceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9996442 6777765 5777766543221 112345666777766777777777888889999
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHHHHccCcCeecccCCcccccccCccc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
+.+.|.+.++++-+ .+.-.. .....++.|.+++. .....++.+.|...++.++. .+....+....
T Consensus 244 ~~~~L~~~~g~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~--~~~~~~~~~~~ 309 (352)
T cd00616 244 YKELLADLPGIRLP-DVPPGV-----------KHSYHLYVIRLDPEAGESRDELIEALKEAGIETRV--HYPPLHHQPPY 309 (352)
T ss_pred HHHHhcCCCCccCC-CCCCCC-----------ceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeee--ecCccccCHhh
Confidence 99999887765422 111000 01245788888630 12345566666555553331 11111100000
Q ss_pred c------ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 499 S------YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 499 ~------~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
. ...++.. ..+..+.|||+++...+++.++.+.++|+
T Consensus 310 ~~~~~~~~~~~~~a----~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 310 KKLLGYPPGDLPNA----EDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred hhccCCCcCCChHH----HHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 0 0001111 11235789999999999999999988874
No 141
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.91 E-value=1.3e-21 Score=208.53 Aligned_cols=284 Identities=21% Similarity=0.210 Sum_probs=194.2
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCH
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~--pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~ 285 (541)
.++...+|+++||+++|.+.+++++||++|+..++..+.. +|+.|+.+...|..+... +...|+++..++..|+
T Consensus 88 ~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~ 163 (402)
T TIGR01821 88 TNIPHVELEAELADLHGKESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEG----IRHSGAEKFIFRHNDV 163 (402)
T ss_pred CcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHH----HHHcCCeEEEECCCCH
Confidence 3677899999999999998999999999999999988765 677777766666554432 2345677666777788
Q ss_pred HHHHHhcc---CCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc---------ccccCCcEEEE
Q 009167 286 EGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLH 353 (541)
Q Consensus 286 e~Le~al~---~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~---------~~~~gaDivv~ 353 (541)
+++++.++ +.++++|++|+|+||+|.+.|+++|.++|+++|+++|+||+++.++... ......|+++.
T Consensus 164 ~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~ 243 (402)
T TIGR01821 164 AHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEG 243 (402)
T ss_pred HHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEE
Confidence 88887775 2248999999999999999999999999999999999999977432110 01123689999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCchHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHhCC
Q 009167 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 354 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~s~~~a~l~l~~l~tl~---~r~~~~~~~a~~la~~L~~~p 428 (541)
|++|.+|+. ||++++++++++.++..... +....++..++.++..++.+. .+.++..++.+++.+.|+++.
T Consensus 244 t~sKa~g~~----GG~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g 319 (402)
T TIGR01821 244 TLAKAFGVV----GGYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALG 319 (402)
T ss_pred echhhhccC----CceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999865 48899999988888754432 334456655555555555432 333445567778888887642
Q ss_pred CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCcccccccCccccccCCCHHH
Q 009167 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSE 507 (541)
Q Consensus 429 ~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~~~~~~~~~~ 507 (541)
+ +.++ ..++++.+.++ ....+..+.+.|. ..++.++... .|.. +
T Consensus 320 -~-----~~~~-------------~~~~i~~i~~~-~~~~a~~~~~~L~~~~Gi~v~~~~------~p~~------~--- 364 (402)
T TIGR01821 320 -I-----PVIP-------------NPSHIVPVIIG-DAALCKKVSDLLLNKHGIYVQPIN------YPTV------P--- 364 (402)
T ss_pred -C-----CcCC-------------CCCCEEEEEeC-CHHHHHHHHHHHHhcCCEEEEeEC------CCCC------C---
Confidence 1 1111 13567888774 3334566777764 3465554321 1110 0
Q ss_pred HHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 508 RLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 508 ~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
...+.||||+....+++.++.+.++|+
T Consensus 365 -----~g~~~lRis~~~~~t~edi~~~~~~l~ 391 (402)
T TIGR01821 365 -----RGTERLRITPTPAHTDKMIDDLVEALL 391 (402)
T ss_pred -----CCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 123589999977655555555555554
No 142
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.91 E-value=7.7e-22 Score=204.88 Aligned_cols=268 Identities=19% Similarity=0.230 Sum_probs=176.9
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCH
Q 009167 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~ 285 (541)
+|+.+. ..|+++||+++|.++.++++++.+++.+++ .+.+||+|++++|+|+... ..++..|+++..++.
T Consensus 46 ~yp~~~-~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~----~~~~~~g~~~~~v~~--- 115 (330)
T PRK05664 46 RLPETD-DGLEAAARAYYGAPQLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHA----HAWRRAGHQVRELDE--- 115 (330)
T ss_pred hCCCCh-HHHHHHHHHHhCCCCEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHH----HHHHHcCCeEEEech---
Confidence 455555 799999999999876555554558988775 3579999999999998865 345567888888875
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCCccccHH---HHHHHHHhCCCEEEEeCCCCCCCccc---cc-ccCCcEEEECCccc
Q 009167 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQK---AL-SLGADLVLHSATKF 358 (541)
Q Consensus 286 e~Le~al~~~~tklV~lesP~NPtG~i~dl~---~Ia~la~~~gi~lIvDea~a~~~~~~---~~-~~gaDivv~S~sK~ 358 (541)
++++++++ +++++++++||||||.+++.+ +|+++|+++|++||+||+|....... .+ .....+++.||||.
T Consensus 116 ~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~ 193 (330)
T PRK05664 116 AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKF 193 (330)
T ss_pred hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeecccc
Confidence 35566664 378999999999999999855 55666788999999999986543211 11 11234889999999
Q ss_pred cCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHhCCCceEEeC
Q 009167 359 IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEAHPKVKRVHY 435 (541)
Q Consensus 359 lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~~~p~v~~v~~ 435 (541)
+|.+| +..||+++++++++.+......++ ++.....++...+.. .....++..++++.+.+.|+++. + .
T Consensus 194 ~gl~G-lRiG~~v~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~----~ 265 (330)
T PRK05664 194 FGLAG-ARLGFVLAEPALLRALAELLGPWT--VSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHG-L----T 265 (330)
T ss_pred ccCCC-cceEEEEeCHHHHHHHHHhcCCCC--CCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCC-C----c
Confidence 98555 468999999999998877654332 333433343444432 22333444556777888887652 1 0
Q ss_pred CCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCC
Q 009167 436 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 515 (541)
Q Consensus 436 P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~ 515 (541)
|. .+.+.++++.++ + ...+.+.|...++.+.. + + ..
T Consensus 266 ~~--------------~~~~~f~~~~~~-~---~~~~~~~l~~~gi~v~~---f----------------------~-~~ 301 (330)
T PRK05664 266 PA--------------GGCALFQWVRTE-D---AAALHEFLARRGILTRL---F----------------------E-QP 301 (330)
T ss_pred cc--------------CCcceEEEEecC-C---HHHHHHHHHHCCeEEEE---C----------------------C-CC
Confidence 10 123356777764 2 34555666555665531 0 0 13
Q ss_pred CeEEEEecC--CCHHHHHHHHHHH
Q 009167 516 NLVRFSFGV--EDFEDLKADVLQA 537 (541)
Q Consensus 516 ~~IRlSvG~--e~~edli~dL~~A 537 (541)
++||||+|. ++.+.+++.|++.
T Consensus 302 ~~iRis~~~~~~~~~~l~~al~~~ 325 (330)
T PRK05664 302 ASLRFGLPADEADWARLDQALLAY 325 (330)
T ss_pred CeEEEECCCCHHHHHHHHHHHHHH
Confidence 589999995 2344555554443
No 143
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.90 E-value=7.9e-22 Score=206.77 Aligned_cols=281 Identities=16% Similarity=0.197 Sum_probs=189.7
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
..+|+++...+||+++|++++.+ +.|++++|+ +++..++.++ .+ +.|+++.|+|+.... .++..|.++..++
T Consensus 48 ~~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~----~~~~~g~~~~~~~ 121 (354)
T PRK06358 48 LVEYPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT-KP-KKVLILAPTFAEYER----ALKAFDAEIEYAE 121 (354)
T ss_pred hhcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh-CC-CcEEEecCChHHHHH----HHHHcCCeeEEEe
Confidence 34567777789999999999873 456666665 8999988875 44 689999999987543 3445577766664
Q ss_pred C-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc----cc---
Q 009167 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL--- 344 (541)
Q Consensus 282 ~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~----~~--- 344 (541)
. .| +++.+.+.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|....... .+
T Consensus 122 ~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 199 (354)
T PRK06358 122 LTEETNFAAN-EIVLEEIKE-EIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYL 199 (354)
T ss_pred CccccCCCcc-HHHHHhhcc-CCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhc
Confidence 3 23 445555555 4899999999999999998 6688888999999999999987543211 11
Q ss_pred -ccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH---HHHHHHHHHHHHHHH
Q 009167 345 -SLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALR 419 (541)
Q Consensus 345 -~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~---tl~~r~~~~~~~a~~ 419 (541)
.....+++.|+||.+|-+| +..||+++ ++.+++.+...... ..++....+++...++ .+....+...++++.
T Consensus 200 ~~~~~vi~~~S~SK~~gl~G-~RiG~lv~~~~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 276 (354)
T PRK06358 200 ENFKNLIIIRAFTKFFAIPG-LRLGYGLTSNKNLAEKLLQMREP--WSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDF 276 (354)
T ss_pred cCCCCEEEEEechhhccCcc-hhheeeecCCHHHHHHHHHhCCC--CcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 1234588999999998555 46788887 46777888765542 2334444444444442 233444555567777
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcccc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
+.+.|++++.+ .+..| .|++++++++.. ..|.+.|...++.+..|..+.
T Consensus 277 l~~~L~~~~~~-~~~~~-----------------~g~f~~~~~~~~----~~~~~~l~~~gI~v~~~~~f~--------- 325 (354)
T PRK06358 277 LYNGLSEFKGI-KVYKP-----------------SVNFIFFKLEKP----IDLRKELLKKGILIRSCSNYR--------- 325 (354)
T ss_pred HHHHHhcCCCc-EEcCC-----------------cceEEEEEcCch----HHHHHHHHHCCeEEEECCCCC---------
Confidence 88888776543 22222 366889998742 456666656677777765431
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 009167 500 YWDLSQSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQAL 538 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~~~~IRlSvG~-e~~edli~dL~~AL 538 (541)
+..+++|||++|. ++.+.+++.|++.+
T Consensus 326 ------------~~~~~~iRls~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 326 ------------GLDENYYRVAVKSREDNKKLLKALEVIL 353 (354)
T ss_pred ------------CCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 1135789999997 55666777666543
No 144
>PRK04311 selenocysteine synthase; Provisional
Probab=99.90 E-value=9.5e-23 Score=219.45 Aligned_cols=213 Identities=23% Similarity=0.301 Sum_probs=169.9
Q ss_pred hhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCc---chHHHHHhhcccCCeEEEEeCC---C
Q 009167 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYR---KTRIFIETVLPKMGITATVIDP---A 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~---~~~~~~~~~l~~~Gi~v~~vd~---~ 283 (541)
+..+.+|+.+|+++|++++++++||++|+.+++.+ +.+||+||+++.+|. +.+.+ ...++..|+++.+++. .
T Consensus 127 ~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e~~~~ggs~~i-~~~~~~~G~~l~~v~~~~~t 204 (464)
T PRK04311 127 SRDRALAALLCALTGAEDALVVNNNAAAVLLALNA-LAAGKEVIVSRGELVEIGGAFRI-PDVMRQAGARLVEVGTTNRT 204 (464)
T ss_pred hHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHH-hCCCCEEEEcchhhhhcCcchhh-HHHHHHCCcEEEEECCCCCC
Confidence 45679999999999999999999999999988865 589999999987553 33433 2345677999988875 4
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCC----CccccHHHHHHHHHhCCCEEEEeCCCC------------CCCcccccccC
Q 009167 284 DMEGLEAALNNNNVSLFFTESPTNPF----LRCVDVKLVSDLCHKKGAIVCIDGTFA------------TPLNQKALSLG 347 (541)
Q Consensus 284 d~e~Le~al~~~~tklV~lesP~NPt----G~i~dl~~Ia~la~~~gi~lIvDea~a------------~~~~~~~~~~g 347 (541)
+++++++++++ +|++|++++++|++ +...|+++|+++||+||+++++|+..+ .+...+++++|
T Consensus 205 ~~~dle~aI~~-~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~G 283 (464)
T PRK04311 205 HLRDYEQAINE-NTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAG 283 (464)
T ss_pred CHHHHHHhcCc-cCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcC
Confidence 68999999987 49999999999983 467899999999999999999999421 22234567789
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHH--Hhh---hcCCCchHHHH-----------HHHHHhHHHHHHHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHH---VLGGALNPNAA-----------YLIIRGMKTLHLRVQ 411 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~--~~~---~~G~~~s~~~a-----------~l~l~~l~tl~~r~~ 411 (541)
+|++++|++|++||+. +|+++++++++++++. ..+ .-+.+++++.+ +..++.++++..|++
T Consensus 284 aDiv~fSg~K~LgGp~---~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~ 360 (464)
T PRK04311 284 VDLVTFSGDKLLGGPQ---AGIIVGKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPE 360 (464)
T ss_pred CcEEEecCcccccCCc---eEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHH
Confidence 9999999999999884 8999999999887763 222 22344444443 344556777899999
Q ss_pred HHHHHHHHHHHHHHhCC
Q 009167 412 QQNSTALRMAKILEAHP 428 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p 428 (541)
++.++++.++++|+.++
T Consensus 361 ~~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 361 ELRARAERLAAALKAAL 377 (464)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999875
No 145
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.90 E-value=1.9e-21 Score=213.83 Aligned_cols=286 Identities=13% Similarity=0.125 Sum_probs=178.5
Q ss_pred CCCch-hHHHHHHHHHHHh------CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE
Q 009167 206 RYGNP-TTVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 206 R~~~p-~~~~Le~~LA~l~------g~-e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
+|+.+ ...+||++||+++ +. .+.|++++|+ +++.+++.+++++||+|+++.|+|..... .+...|.+
T Consensus 180 ~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~----~~~~~g~~ 255 (517)
T PRK13355 180 GYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTA----CVNLAGGT 255 (517)
T ss_pred CCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHH----HHHHCCCE
Confidence 35554 3789999999988 33 2445565554 99999999999999999999999987553 33445666
Q ss_pred EEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-----
Q 009167 277 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (541)
Q Consensus 277 v~~vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----- 341 (541)
+..++. .|+++|++++++ ++++|++++||||||.+++ +++|+++|++||++||+||+|......
T Consensus 256 ~v~~~~~~~~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~ 334 (517)
T PRK13355 256 AVHYRCDEQSEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHT 334 (517)
T ss_pred EEEeecCcccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcc
Confidence 666542 378999999987 4999999999999999998 778899999999999999998753321
Q ss_pred cccccCC---cEEEECCccccCCCCCceEEEEE--eChHH----HHHHHHHhhhcCCCchHHHHHHHHHhHH------HH
Q 009167 342 KALSLGA---DLVLHSATKFIGGHNDVLAGSIS--GSGKL----VTQIRNLHHVLGGALNPNAAYLIIRGMK------TL 406 (541)
Q Consensus 342 ~~~~~ga---Divv~S~sK~lgg~gd~~gG~lv--~~~~l----i~~l~~~~~~~G~~~s~~~a~l~l~~l~------tl 406 (541)
....... .+++.|+||.++..| ...||++ +++++ ++.+..... .....+....+++...+. ..
T Consensus 335 s~~~~~~~~~vi~~~S~SK~~~~~G-~RiG~~i~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~aL~~~~~~~~~ 412 (517)
T PRK13355 335 SIASLAPDLFCVTFSGLSKSHMIAG-YRIGWMILSGNKRIAKDYIEGLNMLAN-MRLCSNVPAQSIVQTALGGHQSVKDY 412 (517)
T ss_pred cHHHhCCCCeEEEEecchhhccCcc-cceEEEEeeCchhhHHHHHHHHHHHhc-CcCCcChHHHHHHHHHhcCCccHHHH
Confidence 1112212 245699999997666 4578887 44443 333332221 212233333333333332 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCccc-EEEEEEcCC----HHHHHHHHHHccCcCe
Q 009167 407 HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGG-VVSFEVDGD----LTATIKFIDALKIPYI 481 (541)
Q Consensus 407 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~-~vsf~l~~~----~~~~~~~l~~L~~~~i 481 (541)
....++..+++..+.+.|++.|++. +..| .|+ ++++.++.. ......+.+.|...++
T Consensus 413 ~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p-----------------~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV 474 (517)
T PRK13355 413 LVPGGRVYEQRELVYNALNAIPGIS-AVKP-----------------KAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKV 474 (517)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcc-cCCC-----------------CeeeEEEeecCcccCCCCCHHHHHHHHHHhCCE
Confidence 1112334455667777887665542 2222 244 456577531 0122233344556678
Q ss_pred ecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH---HHHHHHHH
Q 009167 482 APSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL---KADVLQAL 538 (541)
Q Consensus 482 avS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edl---i~dL~~AL 538 (541)
.+..|..+.. -.++++|||+. .+.+++ ++.|.+.+
T Consensus 475 ~v~pg~~F~~---------------------~~~~~~Ris~~-~~~~~l~~a~~rl~~~~ 512 (517)
T PRK13355 475 LIVQGTGFNW---------------------DKPDHFRVVYL-PRLEDLEDAMDRLADFF 512 (517)
T ss_pred EEeCcchhCC---------------------CCcCEEEEEeC-CCHHHHHHHHHHHHHHH
Confidence 7777754321 02578999996 444444 34444444
No 146
>PRK07777 aminotransferase; Validated
Probab=99.90 E-value=2.2e-21 Score=205.60 Aligned_cols=281 Identities=16% Similarity=0.161 Sum_probs=182.8
Q ss_pred hhHHHHHHHHHHH----hCC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 210 PTTVVVEEKMSAL----EGA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 210 p~~~~Le~~LA~l----~g~----e-~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+...+|++.++++ +|. + +.+++++|++|+.+++.+++.+||+|++..|+|+.....+ ...|.++..+
T Consensus 61 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~----~~~g~~~~~~ 136 (387)
T PRK07777 61 PGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVI----AMAGAHRVPV 136 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH----HHCCCEEEEe
Confidence 3466788888875 454 2 3566666679999999999999999999999998755333 3345555544
Q ss_pred CC--------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----ccc-
Q 009167 281 DP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL- 344 (541)
Q Consensus 281 d~--------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----~~~- 344 (541)
+. .|+++|++++++ ++++|++++|+||||.+++ +++|.++|+++++++|+|++|...... .+.
T Consensus 137 ~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~ 215 (387)
T PRK07777 137 PLVPDGRGFALDLDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLA 215 (387)
T ss_pred ecCCccCCCcCCHHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHh
Confidence 32 478999998876 4999999999999999986 778899999999999999998643211 011
Q ss_pred ----ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH----HHHHHHHHHHHHH
Q 009167 345 ----SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNST 416 (541)
Q Consensus 345 ----~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l----~tl~~r~~~~~~~ 416 (541)
..+.++++.|+||.+|.+| ...|++++++++++.+...........+.....++...+ +.+....+...++
T Consensus 216 ~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 294 (387)
T PRK07777 216 TLPGMRERTVTISSAAKTFNVTG-WKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAK 294 (387)
T ss_pred hCCCCcCcEEEEeechhhccCcC-ceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 1346799999999998555 467899999998888876554333222222222222222 2223333445566
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-CHHHHHHHHHHc-cCcCeecccCCccccccc
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDAL-KIPYIAPSFGGCESIVDQ 494 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~ 494 (541)
++.+.+.|+++ .+. + +|. ..|.++|+.+++ +......|.+.| +..++.+..|..+...
T Consensus 295 ~~~l~~~L~~~-~~~-~-~~~---------------~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~-- 354 (387)
T PRK07777 295 RDRLAAGLAEA-GFE-V-HDS---------------AGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDP-- 354 (387)
T ss_pred HHHHHHHHHhC-CCC-c-cCC---------------CcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCC--
Confidence 77777788764 221 1 111 134467777652 112345667776 3568888887554210
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHH
Q 009167 495 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKAD 533 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~d 533 (541)
+ .-.++.+||+++. ..+++.+.
T Consensus 355 ~----------------~~~~~~~Ri~~~~-~~~~l~~~ 376 (387)
T PRK07777 355 A----------------DAWNHLVRFAFCK-RDDTLDEA 376 (387)
T ss_pred C----------------cCCCCeEEEEecC-CHHHHHHH
Confidence 0 0124689999997 34444333
No 147
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.2e-21 Score=208.17 Aligned_cols=286 Identities=13% Similarity=0.128 Sum_probs=184.8
Q ss_pred hhHHHHHHHHHHHhC-----C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 210 PTTVVVEEKMSALEG-----A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g-----~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
....++++.++++++ . ++++++++|++|+.+++..++++||+|++++|.|..... .++..|+++..++.
T Consensus 66 ~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~ 141 (397)
T PRK07568 66 QGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNG----FATSAGVKIVPVTT 141 (397)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHH----HHHHcCCEEEEeec
Confidence 346789999999873 2 455666666799999999999999999999999987543 33456777776653
Q ss_pred --------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-----cccc-
Q 009167 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS- 345 (541)
Q Consensus 283 --------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-----~~~~- 345 (541)
.++++|++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... ....
T Consensus 142 ~~~~g~~~~~~~~l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~ 220 (397)
T PRK07568 142 KIEEGFHLPSKEEIEKLITP-KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSL 220 (397)
T ss_pred CcccCCCCCCHHHHHHhcCc-cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhc
Confidence 146889988876 4999999999999999996 678999999999999999998653211 1111
Q ss_pred ---cCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHH
Q 009167 346 ---LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (541)
Q Consensus 346 ---~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a 417 (541)
....+++.|+||.++.+| ...|++++ ++++++.+...... ....+...+..+...++ .+....+...+++
T Consensus 221 ~~~~~~~i~~~S~SK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 298 (397)
T PRK07568 221 EGLEDRVIIIDSVSKRYSACG-ARIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDTPESYFDEVREEYKKRR 298 (397)
T ss_pred CCCcCCEEEEecchhhccCCC-cceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 123488999999998666 45788887 46787776544322 22233333333333332 2233334455667
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc------CcCeecccCCcccc
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK------IPYIAPSFGGCESI 491 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~------~~~iavS~G~~~sl 491 (541)
..+.+.|++++.+ .+..|. .|.++|++++.. ....|.+.+. ..++.+..|..+..
T Consensus 299 ~~l~~~L~~~~~~-~~~~p~----------------g~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~ 359 (397)
T PRK07568 299 DILYEELNKIPGV-VCEKPK----------------GAFYIIAKLPVD--DAEDFAKWLLTDFNYNGETVMVAPASGFYA 359 (397)
T ss_pred HHHHHHHhcCCCc-eecCCC----------------cceEEEEecCCC--CHHHHHHHHHhhcccccceEEEeCchHhcC
Confidence 7778888776543 222221 344578888642 2334444432 23566666644311
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009167 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~ 539 (541)
. .+...++||||++.. +.++.++.|.++|+
T Consensus 360 --~----------------~~~~~~~iRls~~~~~~~~~~~~~~l~~~l~ 391 (397)
T PRK07568 360 --T----------------PGLGKNEIRIAYVLNEEDLKRAMEILKEALE 391 (397)
T ss_pred --C----------------CCCCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 0 012347899999853 33445555666554
No 148
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=4.2e-22 Score=207.48 Aligned_cols=271 Identities=17% Similarity=0.216 Sum_probs=183.1
Q ss_pred ccCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 203 EYGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.+.+|+.+...+||+++|+++|.+ +.|++++|+ +++..++..+ +||+|+++.|+|.... ...+..|+++..+
T Consensus 48 ~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~----~~~~~~g~~~~~v 121 (337)
T PRK03967 48 PFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGKHIVITPPTFGMYS----FYAKLNGIPVIDV 121 (337)
T ss_pred ccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCCeEEEeCCChHHHH----HHHHHcCCeEEEe
Confidence 356777777889999999999863 556666665 8888877765 7999999999997533 2344567777777
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccc---c-ccCCcEE
Q 009167 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---L-SLGADLV 351 (541)
Q Consensus 281 d~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~---~-~~gaDiv 351 (541)
+. .|++++++.+. +++++++++|+||||.+++.++|.++++ +++++|+||+|........ . .....++
T Consensus 122 ~~~~~~~~d~~~l~~~~~--~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~ 198 (337)
T PRK03967 122 PLKEDFTIDGERIAEKAK--NASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLIL 198 (337)
T ss_pred ecCCCCCcCHHHHHHhcc--CCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEE
Confidence 53 36788887653 4889999999999999999999999995 7999999999875422111 1 1123588
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCC
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~L~~~p 428 (541)
+.|+||.++-+| +..|++++++++++.++.....++ .+.....++...+ +.+..+++...+++..+.+.|.++
T Consensus 199 l~S~SK~~~l~G-lRiG~iv~~~~~i~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~- 274 (337)
T PRK03967 199 LRTFSKAFGLAG-IRAGYAIANEEIIDALYRIKPPFS--LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY- 274 (337)
T ss_pred EecchHhhcchh-hhheeeecCHHHHHHHHhhcCCCC--CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 999999998555 468999999999988887654332 3444444444333 333334444455566666666542
Q ss_pred CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHH
Q 009167 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
.+| +.|..+|+.++ +.+.|...++.+..++
T Consensus 275 -----~~~----------------~~~~~~~~~~~--------~~~~l~~~gi~v~~~~--------------------- 304 (337)
T PRK03967 275 -----AYP----------------SDANFLLLKLD--------AYDYLLENGIVVRKLS--------------------- 304 (337)
T ss_pred -----cCC----------------CCCcEEEEhHH--------HHHHHHHCCEEEEeCC---------------------
Confidence 122 14667777663 2334333455554321
Q ss_pred HhcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009167 509 LKYGIMDNLVRFSFGVE-DFEDLKADVLQALH 539 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~e-~~edli~dL~~AL~ 539 (541)
+..++++||+++.. +.+.+++.|++.++
T Consensus 305 ---~~~~~~~Ri~~~~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 305 ---GRLEGHIRVTVGKREENDEFIKALKEIKE 333 (337)
T ss_pred ---CCCCCeEEEecCCHHHHHHHHHHHHHHHH
Confidence 01256899999974 56667777766554
No 149
>PRK03321 putative aminotransferase; Provisional
Probab=99.90 E-value=1.8e-22 Score=211.14 Aligned_cols=279 Identities=18% Similarity=0.224 Sum_probs=194.8
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+.+...++|+.+|++++.+ +.|++++|+ +++..++..++++||+|+++.++|..... .++..|.++..++.
T Consensus 52 ~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~----~~~~~g~~~~~v~~ 127 (352)
T PRK03321 52 NRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPI----LVQVAGATPVQVPL 127 (352)
T ss_pred CcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHH----HHHHcCCEEEEccC
Confidence 4456678899999999999874 456677776 77888888889999999999999875432 34456777777764
Q ss_pred C-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHh--CCCEEEEeCCCCCCCcc----ccc----ccC
Q 009167 283 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----SLG 347 (541)
Q Consensus 283 ~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~--~gi~lIvDea~a~~~~~----~~~----~~g 347 (541)
+ |++++++++++ ++++|++++|+||||.++|.++|.++|+. +++++|+|++|...... .+. ...
T Consensus 128 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 206 (352)
T PRK03321 128 TPDHTHDLDAMAAAITD-RTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHP 206 (352)
T ss_pred CCCCCCCHHHHHHhhcc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCC
Confidence 3 68999999877 59999999999999999999999999987 59999999997643321 111 123
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKIL 424 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~L 424 (541)
..+++.|+||.+|.+| ++.|++++++++++.++.... ....+.....++...+ +.+..++++..++...+.+.|
T Consensus 207 ~vi~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~~~~--~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L 283 (352)
T PRK03321 207 NVVVLRTFSKAYGLAG-LRVGYAVGHPEVIAALRKVAV--PFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAAL 283 (352)
T ss_pred CEEEEecchHHhhhHH-HhhhhhcCCHHHHHHHHHhcC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4588899999998544 457999999999998876543 2334444443333333 344445555555566677777
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCC
Q 009167 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 504 (541)
Q Consensus 425 ~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~ 504 (541)
++.. +. + .| ..|+++++.++.. ...|.+.|+..++.+..
T Consensus 284 ~~~~-~~-~-~~----------------~~g~~i~i~l~~~---~~~~~~~l~~~gI~v~~------------------- 322 (352)
T PRK03321 284 RAAG-WT-V-PP----------------SQANFVWLPLGER---TADFAAAAAEAGVVVRP------------------- 322 (352)
T ss_pred HHCC-Cc-c-CC----------------CCCCEEEEeCCCC---HHHHHHHHHHCCEEEEc-------------------
Confidence 7642 21 1 11 1467889888532 45666777666665432
Q ss_pred HHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHhh
Q 009167 505 QSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALHA 540 (541)
Q Consensus 505 ~~~~~~~gi~~~~IRlSvG~-e~~edli~dL~~AL~~ 540 (541)
+ .+..|||+++. ++.+.+++.|++.++.
T Consensus 323 ------~--~~~~iRi~~~~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 323 ------F--AGEGVRVTIGAPEENDAFLRAARAWRAG 351 (352)
T ss_pred ------c--CCCcEEEeeCCHHHHHHHHHHHHHHhcc
Confidence 0 12359999986 4567778888777653
No 150
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=8.7e-22 Score=213.74 Aligned_cols=290 Identities=14% Similarity=0.169 Sum_probs=185.2
Q ss_pred CCCCch-hHHHHHHHHHHHhC--------C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009167 205 GRYGNP-TTVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~g--------~-e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
.+|+++ ...+|+++||++++ . .+.|++++|+ +++..++.+++.|||.|++++|.|.+....+. ...
T Consensus 80 ~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~---~~~ 156 (468)
T PLN02450 80 ALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLK---WRT 156 (468)
T ss_pred hcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHh---hcC
Confidence 445554 45679999999874 1 2346666665 89999999999999999999999988643332 135
Q ss_pred CeEEEEeCCC-------CHHHHHHhccC-----CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCC
Q 009167 274 GITATVIDPA-------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 338 (541)
Q Consensus 274 Gi~v~~vd~~-------d~e~Le~al~~-----~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~ 338 (541)
|+++..++.+ |++++++++++ .++++|++++|+||||.+++ +++|.++|+++|++||+||+|+..
T Consensus 157 g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~ 236 (468)
T PLN02450 157 GVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGT 236 (468)
T ss_pred CcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcccccc
Confidence 7777766531 56888887753 25899999999999999998 457788899999999999998753
Q ss_pred Ccc-----ccc------------ccCCcEEEECCccccCCCCCceEEEEEeChH-HHHHHHHHhhhcCCCchHHHHHHHH
Q 009167 339 LNQ-----KAL------------SLGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHVLGGALNPNAAYLII 400 (541)
Q Consensus 339 ~~~-----~~~------------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~-li~~l~~~~~~~G~~~s~~~a~l~l 400 (541)
... ..+ .....+++.|+||.++-+| ...|+++++++ +++.+.... .++. .+.....++.
T Consensus 237 ~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~G-lRiG~li~~~~~l~~~~~~~~-~~~~-~s~~~Q~a~~ 313 (468)
T PLN02450 237 VFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPG-FRVGAIYSNDEMVVSAATKMS-SFGL-VSSQTQYLLS 313 (468)
T ss_pred ccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCC-ccEEEEEECCHHHHHHHHHHh-hcCC-CCHHHHHHHH
Confidence 211 111 1223588999999997555 46889998754 455555443 2332 3444444433
Q ss_pred HhHHH-------HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-----HHH
Q 009167 401 RGMKT-------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LTA 468 (541)
Q Consensus 401 ~~l~t-------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-----~~~ 468 (541)
..++. +....++..+.++.+.+.|+++ ++. +..| ..|.++|+.++.. .+.
T Consensus 314 ~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~-~~~~----------------~~g~flwi~l~~~~~~~~~~~ 375 (468)
T PLN02450 314 ALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIK-CLKS----------------NAGLFCWVDMRHLLKSNTFEA 375 (468)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCC----------------CceEEEEEEchHhcCcCCchH
Confidence 33322 2333445556667777788765 321 1111 1344788888621 112
Q ss_pred HHHHHHHc-cCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHHh
Q 009167 469 TIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQALH 539 (541)
Q Consensus 469 ~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~---edli~dL~~AL~ 539 (541)
..++.+.| +..++.+..|..+.. ..++++||+++..+. ++.++.|.+++.
T Consensus 376 ~~~l~~~ll~~~gV~v~PG~~f~~---------------------~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~ 429 (468)
T PLN02450 376 EMELWKKIVYEVKLNISPGSSCHC---------------------TEPGWFRVCFANMSEETLDLAMKRLKSFVE 429 (468)
T ss_pred HHHHHHHHHHhCCEEEeCccccCC---------------------CCCCEEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 23344444 345788887755321 125799999996333 344555555554
No 151
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.90 E-value=5.7e-22 Score=208.54 Aligned_cols=295 Identities=16% Similarity=0.151 Sum_probs=194.5
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCC---------------EEEEcCCCCcchHHHHHhhccc
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG---------------HIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd---------------~Vlv~~~~y~~~~~~~~~~l~~ 272 (541)
..+..+++++.+|+++|.++++++++|++|+.+++.+++++|| +||++.+.|......+...+..
T Consensus 43 ~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~ 122 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRL 122 (363)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHh
Confidence 4567889999999999999999999999999999999999998 8888885554321111233445
Q ss_pred CCeEEEEeCC---CCHHHHHHhccCCCceEEE-EeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCC
Q 009167 273 MGITATVIDP---ADMEGLEAALNNNNVSLFF-TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA 348 (541)
Q Consensus 273 ~Gi~v~~vd~---~d~e~Le~al~~~~tklV~-lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~ga 348 (541)
.|.++++++. .|+++++++++++ |++|+ +++|+||+|.++|+++|+++|+++|+++|+|++++..+ .....+|+
T Consensus 123 ~g~~~v~v~~~~~~d~~~le~ai~~~-t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-~~~~~~g~ 200 (363)
T TIGR01437 123 GGGKVVEAGYANECSAEQLEAAITEK-TAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-QKYYRLGA 200 (363)
T ss_pred cCCeEEEEcCCCCCCHHHHHHhcChh-ceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-HHHHHcCC
Confidence 5777777763 4899999999874 88655 67889999999999999999999999999999997332 22345689
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc--hHHHHHHHHHhHHHH----HHHHHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTL----HLRVQQQNSTALRMAK 422 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~--s~~~a~l~l~~l~tl----~~r~~~~~~~a~~la~ 422 (541)
|++++|+||+++|+. +|++++++++++.++......+..+ .......+..+++.+ ..+.++..+++..+.+
T Consensus 201 D~~~~S~~K~l~gp~---~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~ 277 (363)
T TIGR01437 201 DLVIYSGAKAIEGPT---SGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIE 277 (363)
T ss_pred CEEEEeCCcccCCCc---eEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHH
Confidence 999999999988763 7899998888877654322211111 001111111122222 2233444456677888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccC
Q 009167 423 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 423 ~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
.|.+.|++.....+... .+.+ .-..+.|...........+.+.|+..++.+..- +
T Consensus 278 ~L~~i~g~~~~~~~~~~---~~~~-------~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r--------~------- 332 (363)
T TIGR01437 278 ALNTLKGVSASIVQDEA---GRDI-------ARAEIRFDESELGMTAADVVQALRQGEPAIYTR--------G------- 332 (363)
T ss_pred HHhcCCCeEEEEecCCC---CCcC-------ceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEe--------e-------
Confidence 88888776544222110 0000 112356665311124566677775434222110 0
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 503 LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
.....+.+||++..-+ ++.++.|.++|.++
T Consensus 333 --------~~~~~~~~~l~~~~~~-~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 333 --------YKANEGIIEIDPRSVT-GGQLDIIVERIREI 362 (363)
T ss_pred --------eeecCCeEEEEeecCC-HHHHHHHHHHHHHh
Confidence 1124678999998755 66778888888764
No 152
>PRK08363 alanine aminotransferase; Validated
Probab=99.90 E-value=1.6e-21 Score=207.39 Aligned_cols=287 Identities=14% Similarity=0.106 Sum_probs=181.3
Q ss_pred chhHHHHHHHHHHHhC----C----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 209 NPTTVVVEEKMSALEG----A----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g----~----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.+...+||++|+++++ . ++.++++++++|+.+++.+++++||+|+++.|+|......+ ...|..+..+
T Consensus 69 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~v~~ 144 (398)
T PRK08363 69 SEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLV----KFYGGVPVEY 144 (398)
T ss_pred CCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCEEEEe
Confidence 4567789999999873 1 24555555679999999999999999999999999865433 3345554444
Q ss_pred -CC------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc----cc--
Q 009167 281 -DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL-- 344 (541)
Q Consensus 281 -d~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~----~~-- 344 (541)
+. .|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... ..
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~ 223 (398)
T PRK08363 145 RTIEEEGWQPDIDDIRKKITE-KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSL 223 (398)
T ss_pred ccccccCCcCCHHHHHhhCCc-ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHc
Confidence 21 368889988876 4899999999999999998 7789999999999999999986532111 11
Q ss_pred c-cCCcEEEECCccccCCCCCceEEEEEe--ChHHHHHHHHHhhhc---CCCchHHHHHHHHHhH----HHHHHHHHHHH
Q 009167 345 S-LGADLVLHSATKFIGGHNDVLAGSISG--SGKLVTQIRNLHHVL---GGALNPNAAYLIIRGM----KTLHLRVQQQN 414 (541)
Q Consensus 345 ~-~gaDivv~S~sK~lgg~gd~~gG~lv~--~~~li~~l~~~~~~~---G~~~s~~~a~l~l~~l----~tl~~r~~~~~ 414 (541)
. ....+++.|+||.++.+| +..|++++ ++++++.++...... ....+.....++...+ +.+....++..
T Consensus 224 ~~~~~vi~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~ 302 (398)
T PRK08363 224 TKDVPVIVMNGLSKVYFATG-WRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLK 302 (398)
T ss_pred CcCCcEEEEecchhccCCcc-ceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 1 123477899999987666 45788886 666766665433211 1223333333323223 23333444555
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHH-HHccCcCeecccCCccccc
Q 009167 415 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFI-DALKIPYIAPSFGGCESIV 492 (541)
Q Consensus 415 ~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l-~~L~~~~iavS~G~~~sl~ 492 (541)
++...+.+.|++++.+. +..|. .|.++|+.+++. ......++ ..|+..++.+..|..+..
T Consensus 303 ~~~~~l~~~L~~~~~~~-~~~p~----------------g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~- 364 (398)
T PRK08363 303 ERRDYIYKRLNEIPGIS-TTKPQ----------------GAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGE- 364 (398)
T ss_pred HHHHHHHHHHhcCCCCE-ecCCC----------------eEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCC-
Confidence 66777778887765542 32221 233455577641 00122333 334556777776654311
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009167 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~ 539 (541)
..++++|||++.. +.++.++.|.+.++
T Consensus 365 --------------------~~~~~iRis~~~~~~~l~~~l~~l~~~~~ 393 (398)
T PRK08363 365 --------------------YGAGHFRLVFLPPVEILEEAMDRFEEFMR 393 (398)
T ss_pred --------------------CCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1257899999853 12333444444443
No 153
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=2e-21 Score=207.34 Aligned_cols=284 Identities=20% Similarity=0.184 Sum_probs=197.7
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~--pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e 286 (541)
.+..++||++||+++|.+.+++++||++|+..++..+.+ +||.|++....|+.+...+ ...|.++..++..|++
T Consensus 89 ~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~----~~~g~~~~~~~~~d~~ 164 (406)
T PRK13393 89 NHYHVLLEAELADLHGKEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGI----RHSRAEKRIFRHNDPA 164 (406)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHH----HHcCCeEEEeCCCCHH
Confidence 457899999999999999999999999999999987765 7888888777777665443 2246677777778888
Q ss_pred HHHHhcc---CCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc---------ccccCCcEEEEC
Q 009167 287 GLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHS 354 (541)
Q Consensus 287 ~Le~al~---~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~---------~~~~gaDivv~S 354 (541)
++++.++ +.++++|++|+++|++|.+.|+++|.++|+++|+++|+|++++.++... ......|+++.|
T Consensus 165 ~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~t 244 (406)
T PRK13393 165 DLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGT 244 (406)
T ss_pred HHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEe
Confidence 8887764 2247899999999999999999999999999999999999986433110 011235888899
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCchHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHhCCC
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKILEAHPK 429 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~s~~~a~l~l~~l~tl~---~r~~~~~~~a~~la~~L~~~p~ 429 (541)
++|.+|.. ||++++++++++.++..... ++...++..+..+...++.+. ...++..++.+++.+.|++. +
T Consensus 245 lsKa~g~~----GG~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 319 (406)
T PRK13393 245 LAKAFGVM----GGYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA-G 319 (406)
T ss_pred Cchhhccc----CceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-C
Confidence 99999864 58999999988888765433 344455555554455554432 22344456677778877753 1
Q ss_pred ceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccC-cCeecccCCcccccccCccccccCCCHHHH
Q 009167 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 430 v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~-~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
. +.+ ++.|+++.+.+. +......+.+.|.. .++.++.+.. |.. +
T Consensus 320 ~-----~~~-------------~~~~~i~~v~~~-~~~~~~~l~~~L~~~~Gi~v~~~~~------p~~------p---- 364 (406)
T PRK13393 320 I-----PHL-------------PNPSHIVPVMVG-DPVLCKQISDELLDRYGIYVQPINY------PTV------P---- 364 (406)
T ss_pred C-----CcC-------------CCCCCeEEEEeC-CHHHHHHHHHHHHHhCCEEEEeECC------CCC------C----
Confidence 1 111 124678888764 33345667776654 4666554311 110 0
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 509 LKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
...+.||||++..++++.++.+.++|++
T Consensus 365 ----~g~~~iRis~~~~~t~edid~l~~~l~~ 392 (406)
T PRK13393 365 ----RGTERLRITPSPLHTDADIEHLVQALSE 392 (406)
T ss_pred ----CCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 1236899999887776666666666653
No 154
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.90 E-value=2.5e-21 Score=204.95 Aligned_cols=249 Identities=17% Similarity=0.160 Sum_probs=176.0
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~L 288 (541)
.+..+++++.+++++|.++.+++++|++++..++.+++++||+|+++++.|++....+ ...+.++..++..|++++
T Consensus 86 ~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~l 161 (397)
T PRK06939 86 QDLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGV----RLCKAKRYRYANNDMADL 161 (397)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHH----HhcCCceEEeCCCCHHHH
Confidence 3567899999999999888999999999999999999999999999999998865443 233556666666788888
Q ss_pred HHhccC---C--CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc-------c--cccCCcEEEEC
Q 009167 289 EAALNN---N--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------A--LSLGADLVLHS 354 (541)
Q Consensus 289 e~al~~---~--~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~-------~--~~~gaDivv~S 354 (541)
++.+++ . ++++|++++..|++|.+.++++|.++|+++|++||+|++|..++... . ...++|+++.|
T Consensus 162 ~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S 241 (397)
T PRK06939 162 EAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGT 241 (397)
T ss_pred HHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEE
Confidence 888753 1 48899988889999999999999999999999999999986432111 1 11256899999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCC
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPK 429 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~ 429 (541)
+||+++|. .+|++++++++++.++.... .+++...+..+..+...++.+ ....++..++.+.+.+.|+++.
T Consensus 242 ~sK~~~g~---r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~- 317 (397)
T PRK06939 242 LGKALGGA---SGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAAG- 317 (397)
T ss_pred CHHHhCcc---CceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-
Confidence 99999654 37999999999888875432 223333343333333344333 2334455567777777777642
Q ss_pred ceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecc
Q 009167 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 484 (541)
Q Consensus 430 v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS 484 (541)
+. + .+ +.++++.+.++. .....+|.+.|...++.+.
T Consensus 318 ~~-~-~~----------------~~~~~~~~~~~~-~~~~~~~~~~L~~~gI~v~ 353 (397)
T PRK06939 318 FT-L-GP----------------GEHPIIPVMLGD-AKLAQEFADRLLEEGVYVI 353 (397)
T ss_pred CC-c-CC----------------CCCCEEEEEECC-HHHHHHHHHHHHHCCceEe
Confidence 11 1 11 134566666643 2345677777765577665
No 155
>PRK14012 cysteine desulfurase; Provisional
Probab=99.90 E-value=6.4e-22 Score=210.96 Aligned_cols=300 Identities=19% Similarity=0.205 Sum_probs=193.0
Q ss_pred chhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all----~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+..+++|+.+|+++|.+ +++++++|++++++++.++. ++||+|+++..+|+++...+.. ++..|+++++++.
T Consensus 48 ~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~-~~~~g~~~~~v~~ 126 (404)
T PRK14012 48 EEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQ-LEREGFEVTYLDP 126 (404)
T ss_pred HHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHH-HHhCCCEEEEEcc
Confidence 356788999999999984 47777778899999887763 7899999999999887655533 4456888888764
Q ss_pred C-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcEEEECCc
Q 009167 283 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (541)
Q Consensus 283 ~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDivv~S~s 356 (541)
+ |+++|++++++ ++++|++++++||||.+.|+++|.++|+++|+++|+|++++.+.. .+....++|++++|++
T Consensus 127 ~~~g~~d~~~l~~~i~~-~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~ 205 (404)
T PRK14012 127 QSNGIIDLEKLEAAMRD-DTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAH 205 (404)
T ss_pred CCCCcCCHHHHHHhcCC-CCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehh
Confidence 2 89999999987 499999999999999999999999999999999999999876543 3445668999999999
Q ss_pred cccCCCCCceEEEEEeChHHHHHHHHHhh-------hcCCCchHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHH
Q 009167 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKILE 425 (541)
Q Consensus 357 K~lgg~gd~~gG~lv~~~~li~~l~~~~~-------~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~a~~la~~L~ 425 (541)
|.+|++| .|+++.+++...++..... ...++.+.........+++. .....++..+.++.+.+.|+
T Consensus 206 K~~gp~g---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~ 282 (404)
T PRK14012 206 KIYGPKG---IGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIK 282 (404)
T ss_pred hccCCCc---eEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 9887654 3544444332222211100 00111121111111122222 22334455566677777777
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCccccc-ccCccccccCCC
Q 009167 426 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV-DQPAIMSYWDLS 504 (541)
Q Consensus 426 ~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~-~~pa~~~~~~~~ 504 (541)
+.+.+... .+.-... .....++|.+.+. ..++..|+ +++++.|..+... .+|.
T Consensus 283 ~~~~i~~~-~~~~~~~-----------~~~~~~~~~~~~~----~~~~~~l~--~~~i~~g~~~~~~~~~~~-------- 336 (404)
T PRK14012 283 DIEEVYLN-GDLEQRV-----------PGNLNVSFNYVEG----ESLIMALK--DLAVSSGSACTSASLEPS-------- 336 (404)
T ss_pred cCCCEEEe-CCccccC-----------CCEEEEEEeCcCH----HHHHHhCC--CeEEEchhhhCCCCCCCC--------
Confidence 77765422 1100000 0122456665321 34566665 5677777543221 1111
Q ss_pred HHHHHhcCC----CCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 505 QSERLKYGI----MDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 505 ~~~~~~~gi----~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.....+++ ..+.||||++..++++.++.+.++|++
T Consensus 337 -~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~ 375 (404)
T PRK14012 337 -YVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRK 375 (404)
T ss_pred -HHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 11122343 357999999998777777777776654
No 156
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.90 E-value=5e-22 Score=207.76 Aligned_cols=283 Identities=16% Similarity=0.166 Sum_probs=189.7
Q ss_pred chhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhcc----CC-CEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP----AG-GHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~----pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
....+++|++||+++|.+ +++++++++++++.++.++.. +| ++|+++..+|++....+. .++..|++++.++
T Consensus 41 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~-~~~~~G~~v~~v~ 119 (353)
T TIGR03235 41 KKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIR-ALERNGFTVTYLP 119 (353)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHH-HHHhcCCEEEEEc
Confidence 355788999999999984 344455556899998888753 56 789999999988766553 3456688888876
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECC
Q 009167 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSA 355 (541)
Q Consensus 282 ~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~ 355 (541)
. .|+++|++++++ ++++|++++++||||.+.|+++|.++|+++|+++|+|++++.+. ..+....++|+++.|+
T Consensus 120 ~~~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~ 198 (353)
T TIGR03235 120 VDESGRIDVDELADAIRP-DTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSG 198 (353)
T ss_pred cCCCCcCCHHHHHHhCCC-CCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeeh
Confidence 4 378999999987 49999999999999999999999999999999999999977643 3444557899999999
Q ss_pred ccccCCCCCceEEEEEeChHHHHH--HHHHh-------hhcCCCchHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHH
Q 009167 356 TKFIGGHNDVLAGSISGSGKLVTQ--IRNLH-------HVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAK 422 (541)
Q Consensus 356 sK~lgg~gd~~gG~lv~~~~li~~--l~~~~-------~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~a~~la~ 422 (541)
+|+++++| .|+++.+++.... ++... ....++.+....+.+..+++. ++.+.+++.+.+..+.+
T Consensus 199 ~K~~gp~g---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~ 275 (353)
T TIGR03235 199 HKIYGPKG---IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRD 275 (353)
T ss_pred hhcCCCCc---eEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99987665 6777777654322 11100 011223332222222223332 23344555566666666
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccC
Q 009167 423 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 423 ~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
.|++ ++++-+.-|. ....++++|.+++. ....+...|+. +++++.|..++.-. .
T Consensus 276 ~l~~-~g~~~~~~~~--------------~~~~~i~~~~~~~~--~~~~v~~~L~~-~i~v~~g~~~~~~~--------~ 329 (353)
T TIGR03235 276 ALQT-LGVKLNGDPA--------------ETIPHILNFSIDGV--NSEALIVNLRA-DAAVSTGSACSSSK--------Y 329 (353)
T ss_pred Hhcc-CCeEEeCCcc--------------cccCCEEEEEeCCc--CHHHHHHHHhC-CeEEEchhhcCCCC--------C
Confidence 6655 4553221111 01356888888752 34556666654 78888887653210 1
Q ss_pred CCHHHHHhcCCCC----CeEEEEe
Q 009167 503 LSQSERLKYGIMD----NLVRFSF 522 (541)
Q Consensus 503 ~~~~~~~~~gi~~----~~IRlSv 522 (541)
-+...+.++|+.+ +.||+|+
T Consensus 330 ~~~~~l~~~g~~~~~~~~~~r~s~ 353 (353)
T TIGR03235 330 EPSHVLQAMGLDTDRARGAIRFSW 353 (353)
T ss_pred CCCHHHHHcCCCHHHhCccEEEeC
Confidence 1235677788864 7899985
No 157
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=6e-22 Score=208.50 Aligned_cols=217 Identities=18% Similarity=0.171 Sum_probs=157.2
Q ss_pred cCCCCchhHHHHHHHHHHHh----C--C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 204 YGRYGNPTTVVVEEKMSALE----G--A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~----g--~-e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
+.+|+++....|++.||+++ | . .+.|++++|+ +++.+++.+++++||.|+++.|+|..... .+...|+
T Consensus 59 ~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~----~~~~~g~ 134 (368)
T PRK03317 59 LNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPI----IARGTHT 134 (368)
T ss_pred hccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH----HHHhcCC
Confidence 45667777788999999998 3 2 2456666665 99999999999999999999999987543 3344566
Q ss_pred EEEEeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc---ccc---
Q 009167 276 TATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KAL--- 344 (541)
Q Consensus 276 ~v~~vd~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~---~~~--- 344 (541)
++..++. .|++++++++++.++++|++++|+||||.+++.+++.++++.++++||+||+|...... ...
T Consensus 135 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~ 214 (368)
T PRK03317 135 EWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLL 214 (368)
T ss_pred eeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHH
Confidence 6665532 37899999887545899999999999999999999999999999999999998753211 111
Q ss_pred c-cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH---HHHHHHHHHHHHHHHH
Q 009167 345 S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRM 420 (541)
Q Consensus 345 ~-~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~---tl~~r~~~~~~~a~~l 420 (541)
. ....+++.|+||.+|.+| +..|++++++++++.++.....+ ..++..+.++...++ .+..++++..++.+.+
T Consensus 215 ~~~~~~i~~~SfSK~~g~~G-lRiG~~~~~~~~~~~l~~~~~~~--~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 291 (368)
T PRK03317 215 PEYPRLVVSRTMSKAFAFAG-GRLGYLAAAPAVVDALRLVRLPY--HLSAVTQAAARAALRHADELLASVAALRAERDRV 291 (368)
T ss_pred HhCCCEEEEEechhhhccch-hhhhhhhCCHHHHHHHHhcCCCC--CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 1 123478899999998555 46799999999999887654322 344554444444443 3333444455666677
Q ss_pred HHHHHhC
Q 009167 421 AKILEAH 427 (541)
Q Consensus 421 a~~L~~~ 427 (541)
.+.|+++
T Consensus 292 ~~~L~~~ 298 (368)
T PRK03317 292 VAWLREL 298 (368)
T ss_pred HHHHHHC
Confidence 7777765
No 158
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=6.3e-22 Score=207.52 Aligned_cols=275 Identities=13% Similarity=0.121 Sum_probs=177.2
Q ss_pred CCCchhHHHHHHHHHHHhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-
Q 009167 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~-e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~- 282 (541)
+|+++....|++.||++++. .+.|++++|+ +++.+++.+++++||.|++++|+|..... .....|..+..++.
T Consensus 61 ~Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~----~~~~~g~~~~~~~l~ 136 (357)
T PRK14809 61 SYPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGM----SARYHHGEVREYPVS 136 (357)
T ss_pred cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH----HHHHcCCeEEEEecc
Confidence 34555678999999999986 3456666665 99999999999999999999999975332 22334555554432
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC--CCEEEEeCCCCCCCcccc----cc-cCCc
Q 009167 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKA----LS-LGAD 349 (541)
Q Consensus 283 ------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~--gi~lIvDea~a~~~~~~~----~~-~gaD 349 (541)
.+++++++... ++++|++++|+||||.+++.+++.++++.. +++||+||+|........ .. ....
T Consensus 137 ~~~~~~~~~~~~~~~~~--~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~v 214 (357)
T PRK14809 137 KADDFEQTADTVLDAYD--GERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDV 214 (357)
T ss_pred cCcCCCcCHHHHHHhhc--CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCE
Confidence 14566665543 389999999999999999988777776643 789999999875432111 11 2345
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHh
Q 009167 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKILEA 426 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L~~ 426 (541)
+++.|+||.++.+| +..|++++++++++++......+ .++.....++...+.. +....+...+..+.+.+.|..
T Consensus 215 i~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 291 (357)
T PRK14809 215 AVLRTFSKAYGLAG-LRLGYAVVPEEWADAYARVNTPF--AASELACRAGLAALDDDEHVERTVETARWAREYIREELDA 291 (357)
T ss_pred EEEecchhHhcCcc-hhheeeecCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88899999998555 45799999999998887754322 2344444444444422 222222233334444444432
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHH
Q 009167 427 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQS 506 (541)
Q Consensus 427 ~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~ 506 (541)
. .+| ..|+++++++++ ..+|.+.|...++.+..|..+.
T Consensus 292 ~------~~~----------------~~g~f~~~~~~~----~~~~~~~l~~~gv~v~~g~~f~---------------- 329 (357)
T PRK14809 292 P------TWE----------------SAGNFVLAEVGD----ASAVAEAAQERGVIVRDCTSFG---------------- 329 (357)
T ss_pred c------cCC----------------CCCCEEEEECCC----HHHHHHHHHHCCEEEEECccCC----------------
Confidence 1 122 147788998852 3456666666677777764421
Q ss_pred HHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 009167 507 ERLKYGIMDNLVRFSFGV-EDFEDLKADVLQAL 538 (541)
Q Consensus 507 ~~~~~gi~~~~IRlSvG~-e~~edli~dL~~AL 538 (541)
.+++|||+++. ++.++.++.|.+++
T Consensus 330 -------~~~~iRls~~~~~~~~~~l~~L~~~l 355 (357)
T PRK14809 330 -------LPECIRITCGTREETERAVEVLNEVL 355 (357)
T ss_pred -------CCCeEEEecCCHHHHHHHHHHHHHHh
Confidence 13689999984 23344444554444
No 159
>PRK08175 aminotransferase; Validated
Probab=99.90 E-value=1.4e-21 Score=207.75 Aligned_cols=276 Identities=16% Similarity=0.151 Sum_probs=181.3
Q ss_pred hHHHHHHHHHHHh----CC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+||+++++++ |. ++.+++++|+ +++..++..+++|||+|++++|+|+.....+ ...|+++..++
T Consensus 68 G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~ 143 (395)
T PRK08175 68 GIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGA----VIAGAQVRSVP 143 (395)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCeEEEEe
Confidence 3668888888875 32 2246666665 8999999999999999999999998754333 34577777665
Q ss_pred CC----CHHHHHHhccC--CCceEEEEeCCCCCCCccccH---HHHHHHHHhCCCEEEEeCCCCCCCcc-----cc--cc
Q 009167 282 PA----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-----KA--LS 345 (541)
Q Consensus 282 ~~----d~e~Le~al~~--~~tklV~lesP~NPtG~i~dl---~~Ia~la~~~gi~lIvDea~a~~~~~-----~~--~~ 345 (541)
.+ ++++++++++. .++++|++++|+||||.+++. ++|+++|+++|+++|+|++|...... .. +.
T Consensus 144 ~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~ 223 (395)
T PRK08175 144 LVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVP 223 (395)
T ss_pred cccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCC
Confidence 42 47888887763 258999999999999999997 68889999999999999997643211 11 11
Q ss_pred --cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHHHH
Q 009167 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALR 419 (541)
Q Consensus 346 --~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a~~ 419 (541)
.+..+++.|+||.+|.+| ...|++++++++++.+.+.........+......+...+. .+....+...+++..
T Consensus 224 ~~~~~~i~~~S~SK~~g~pG-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (395)
T PRK08175 224 GAKDVAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDV 302 (395)
T ss_pred CcccCEEEEeeccccccCcc-hhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 123477899999997665 4578999999999988876554333322222222222232 122233344456677
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH--HHHHHHHHHc-cCcCeecccCCcccccccCc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDAL-KIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~--~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa 496 (541)
+.+.|++++ + .+..|. .|.++|++++... .....|.+.+ +..++.+..|..+..
T Consensus 303 ~~~~L~~~~-~-~~~~p~----------------~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~----- 359 (395)
T PRK08175 303 LVKGLHEAG-W-MVEMPK----------------ASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGD----- 359 (395)
T ss_pred HHHHHHHcC-C-cccCCC----------------EEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCc-----
Confidence 777887652 2 122221 4778999997531 1245565543 456777776644310
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHH
Q 009167 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLK 531 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli 531 (541)
..++++||+++. +.+.+.
T Consensus 360 ----------------~~~~~lRis~~~-~~~~~~ 377 (395)
T PRK08175 360 ----------------YGDTHVRFALIE-NRDRIR 377 (395)
T ss_pred ----------------CCCCeEEEEeCC-CHHHHH
Confidence 124689999984 444433
No 160
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.90 E-value=2.9e-21 Score=206.08 Aligned_cols=285 Identities=19% Similarity=0.182 Sum_probs=196.2
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCH
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~--pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~ 285 (541)
.++...+|+++||+++|.++.++++||++|+..++..+.. +++.|+.....|.+....+ ...++++..++..|+
T Consensus 89 ~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~----~~~~~~~~~~~~~d~ 164 (407)
T PRK09064 89 TNHYHVELERELADLHGKEAALVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGI----RRSRCEKHIFRHNDV 164 (407)
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHH----HHcCCcEEEECCCCH
Confidence 4778999999999999988899999999998888887654 7777777766666544322 234566666777788
Q ss_pred HHHHHhccC---CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc-------c--ccccCCcEEEE
Q 009167 286 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------K--ALSLGADLVLH 353 (541)
Q Consensus 286 e~Le~al~~---~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~-------~--~~~~gaDivv~ 353 (541)
+++++.++. .++++|++|+|+|++|.+.|+++|.++|+++|++||+||+|+.+... . ......|+++.
T Consensus 165 ~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~ 244 (407)
T PRK09064 165 AHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEG 244 (407)
T ss_pred HHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEE
Confidence 888887752 25899999999999999999999999999999999999998643211 1 01124589999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCchHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHhCC
Q 009167 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 354 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~s~~~a~l~l~~l~tl~---~r~~~~~~~a~~la~~L~~~p 428 (541)
|++|.+|.. ||++++++++++.++..... +....++..+..++..++.+. ...++..++.+++.+.|++..
T Consensus 245 t~sKa~g~~----GG~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g 320 (407)
T PRK09064 245 TLAKAFGVM----GGYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAG 320 (407)
T ss_pred ecchhhhcc----CceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999865 48899999988887654432 233455655555555665543 224556677778888887642
Q ss_pred CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCcccccccCccccccCCCHHH
Q 009167 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSE 507 (541)
Q Consensus 429 ~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~~~~~~~~~~ 507 (541)
+ +.++ ..++++.|.++. ...+..+.+.|. ..++.+.... .|.. +
T Consensus 321 -~-----~~~~-------------~~~~iv~i~~~~-~~~~~~l~~~L~~~~gi~v~~~~------~p~~------~--- 365 (407)
T PRK09064 321 -I-----PVMP-------------NESHIVPVMVGD-PEKCKKASDMLLEEHGIYVQPIN------YPTV------P--- 365 (407)
T ss_pred -C-----CCCC-------------CCCCEEEEEeCC-HHHHHHHHHHHHHhCCEEEeeEC------CCCC------C---
Confidence 1 1111 135678888753 234566666653 3466554321 1110 0
Q ss_pred HHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 508 RLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 508 ~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
...+.||||++..++++.++.+.++|++
T Consensus 366 -----~~~~~lRis~~~~~t~edi~~l~~~l~~ 393 (407)
T PRK09064 366 -----RGTERLRITPTPFHTDEMIDHLVEALVE 393 (407)
T ss_pred -----CCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 1235799999987776666666666653
No 161
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.90 E-value=3.2e-21 Score=205.55 Aligned_cols=275 Identities=14% Similarity=0.108 Sum_probs=176.1
Q ss_pred hHHHHHHHHHHHh----CC---Cc-EEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALE----GA---ES-TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~---e~-~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
....||+.+|+++ |. .+ .|++++|+ +++.+++.+++++||.|++++|+|+.... .++..|.++..++
T Consensus 72 G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~ 147 (403)
T PRK08636 72 GIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQ----AFILAGGNVHKMP 147 (403)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH----HHHhcCCEEEEEe
Confidence 4567888888775 53 23 46666665 99999999999999999999999988653 3444677776653
Q ss_pred C-------CCHH----HHHHhccC--CCceEEEEeCCCCCCCccccH---HHHHHHHHhCCCEEEEeCCCCCCCcc----
Q 009167 282 P-------ADME----GLEAALNN--NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 282 ~-------~d~e----~Le~al~~--~~tklV~lesP~NPtG~i~dl---~~Ia~la~~~gi~lIvDea~a~~~~~---- 341 (541)
. .|++ .+++++++ .++++|++++|+||||.+++. ++|+++|++|+++||+||+|......
T Consensus 148 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~ 227 (403)
T PRK08636 148 LEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKT 227 (403)
T ss_pred ccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCC
Confidence 2 2444 45666642 258999999999999999985 58888899999999999998753211
Q ss_pred cc---ccc--CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchH---HHHHHHHHhHHH-HHHHHHH
Q 009167 342 KA---LSL--GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP---NAAYLIIRGMKT-LHLRVQQ 412 (541)
Q Consensus 342 ~~---~~~--gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~---~~a~l~l~~l~t-l~~r~~~ 412 (541)
.+ ++. ...+++.|+||.+|.+| ...||+++++++++.+...........+. ..+..++.+.+. +....+.
T Consensus 228 ~~~~~~~~~~~~~i~~~S~SK~~~~~G-lRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~ 306 (403)
T PRK08636 228 PSILEVEGAKDVAVESYTLSKSYNMAG-WRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRET 306 (403)
T ss_pred CChhcCCCccccEEEEEecccccCCcc-ceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHH
Confidence 11 111 23356789999997555 56899999999998887765432222222 222222222122 2223334
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH--HHHHHHHHH-ccCcCeecccCCcc
Q 009167 413 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDA-LKIPYIAPSFGGCE 489 (541)
Q Consensus 413 ~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~--~~~~~~l~~-L~~~~iavS~G~~~ 489 (541)
..++++.+.+.|+++ .+ .+..| ..|.++|+.++... ....+|.+. ++..++.+..|..+
T Consensus 307 ~~~~~~~l~~~L~~~-~~-~~~~p----------------~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f 368 (403)
T PRK08636 307 YRKRRDVLIESFANA-GW-ELQKP----------------RASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGF 368 (403)
T ss_pred HHHHHHHHHHHHHHC-CC-cccCC----------------CcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhh
Confidence 445666777788764 22 12222 14678899987421 123455544 44457777766443
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009167 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 530 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edl 530 (541)
.. ..++++||+++. +.+++
T Consensus 369 ~~---------------------~~~~~iRi~~~~-~~~~l 387 (403)
T PRK08636 369 GE---------------------YGDEYVRIALIE-NENRI 387 (403)
T ss_pred Cc---------------------CCCCeEEEEecC-CHHHH
Confidence 10 124799999994 44443
No 162
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.90 E-value=1.8e-21 Score=204.14 Aligned_cols=268 Identities=17% Similarity=0.169 Sum_probs=174.0
Q ss_pred CCCCchh-HHHHHHHHHHHh----C---C-CcEEEeCCH-HHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009167 205 GRYGNPT-TVVVEEKMSALE----G---A-ESTVIMASG-MSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 205 ~R~~~p~-~~~Le~~LA~l~----g---~-e~~i~~sSG-s~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
.+|+++. ..+|++++++++ | . .+.|++++| ++++..++..+ +++||+|++++|+|.+.... +...
T Consensus 50 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~----~~~~ 125 (357)
T TIGR03539 50 PGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVG----ALLA 125 (357)
T ss_pred CCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHH----HHhc
Confidence 3455443 557777887776 3 3 245666666 58999888877 79999999999999875432 3456
Q ss_pred CeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-cc---c--
Q 009167 274 GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-KA---L-- 344 (541)
Q Consensus 274 Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-~~---~-- 344 (541)
|.++..++ +++++. .+ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|...... .+ +
T Consensus 126 g~~~~~v~--~~~~l~---~~-~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 199 (357)
T TIGR03539 126 GATPVAAD--DPTELD---PV-GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDP 199 (357)
T ss_pred CCEEeccC--ChhhcC---cc-CccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceec
Confidence 77776664 444332 23 5899999999999999997 557888999999999999998642211 11 1
Q ss_pred -----ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHHHHHHHH
Q 009167 345 -----SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNST 416 (541)
Q Consensus 345 -----~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~ 416 (541)
.....+++.|+||.++.+| ..+|+++++++++++++......+...+......+...++. +....+...++
T Consensus 200 ~~~~~~~~~vi~~~S~SK~~~~~G-~R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 278 (357)
T TIGR03539 200 RVCGGDHTGLLAVHSLSKRSNLAG-YRAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAAR 278 (357)
T ss_pred ccCCCccccEEEEeccccccCCCc-eeEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 1123488999999987655 56899999999999888766555555555444444444422 22223333455
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCc
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa 496 (541)
++.+.+.|++++ +. +..|. .|-++++.++.+ ...+.+.|...++.+..|..+..
T Consensus 279 ~~~~~~~L~~~g-~~-~~~p~----------------~~~~~~~~~~~~---~~~~~~~l~~~gV~v~pg~~f~~----- 332 (357)
T TIGR03539 279 RAQLKPALEKAG-FR-IDHSE----------------AGLYLWATRGED---AWDTVDRLAELGILVAPGDFYGP----- 332 (357)
T ss_pred HHHHHHHHHHcC-CC-CcCCC----------------ccEEEEEECCCC---HHHHHHHHHhCCEEECCccccCC-----
Confidence 666777777642 21 11111 234667776532 34455666666777776643210
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009167 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVE 525 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~e 525 (541)
..+++||||++.+
T Consensus 333 ----------------~~~~~iRis~~~~ 345 (357)
T TIGR03539 333 ----------------AGSQHVRVALTAT 345 (357)
T ss_pred ----------------CCCCeEEEEecCC
Confidence 0247999999973
No 163
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.90 E-value=5.7e-21 Score=203.62 Aligned_cols=282 Identities=16% Similarity=0.174 Sum_probs=179.4
Q ss_pred HHHHHHHHHHhCC---CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC------
Q 009167 213 VVVEEKMSALEGA---ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 282 (541)
Q Consensus 213 ~~Le~~LA~l~g~---e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~------ 282 (541)
+.+.+.+++..|. .+.|++++| ++|+..++.+++++||+|++++|+|......+. ..+..+..++.
T Consensus 77 ~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~----~~~~~~~~v~~~~~~~~ 152 (402)
T PRK06107 77 KAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVL----ANDGTPVIVACPEEQGF 152 (402)
T ss_pred HHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHH----HcCCEEEEecCCcccCC
Confidence 3444444444454 233555555 699999999999999999999998887543332 22333333332
Q ss_pred -CCHHHHHHhccCCCceEEEEeCCCCCCCccccH---HHHHHHHHhC-CCEEEEeCCCCCCCcc-----cccc-----cC
Q 009167 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKK-GAIVCIDGTFATPLNQ-----KALS-----LG 347 (541)
Q Consensus 283 -~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl---~~Ia~la~~~-gi~lIvDea~a~~~~~-----~~~~-----~g 347 (541)
.|++++++++++ ++++|++++|+||||.+++. ++|+++|+++ |+++|+|++|...... .... .+
T Consensus 153 ~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~ 231 (402)
T PRK06107 153 KLTPEALEAAITP-RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRD 231 (402)
T ss_pred CCCHHHHHhhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccC
Confidence 357899998876 48999999999999999974 5778888998 9999999998642111 1111 12
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a~~la~~ 423 (541)
..+++.|+||.++.+| ...||+++++++++.+.......+...+...++++...++ .+....+...+++..+.+.
T Consensus 232 ~vi~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 310 (402)
T PRK06107 232 RVLVTNGVSKTYAMTG-WRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALAL 310 (402)
T ss_pred CEEEEeccchhhcCcc-cceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 4588999999997565 4689999999999998887765555556555555544442 2333344455667777788
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC--------CH--HHHHHHHHH-ccCcCeecccCCccccc
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--------DL--TATIKFIDA-LKIPYIAPSFGGCESIV 492 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~--------~~--~~~~~~l~~-L~~~~iavS~G~~~sl~ 492 (541)
|++++.+. +.-|. .|..+|+.++. +. .....++.. ++..++.+..|..+
T Consensus 311 L~~~~g~~-~~~p~----------------gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~F--- 370 (402)
T PRK06107 311 LNAIPGLS-CLVPD----------------GAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAY--- 370 (402)
T ss_pred HhcCCCCc-ccCCC----------------cceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCcccc---
Confidence 87754432 21111 34456777631 10 022344433 34557777766442
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009167 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 540 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~~ 540 (541)
|. ++++|||++.+ +.++.++.|.+.|++
T Consensus 371 -------------------g~-~~~iRis~~~~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 371 -------------------GL-SPYFRLSIATSLETLEEACARIERAVAA 400 (402)
T ss_pred -------------------CC-CCeEEEEeCCCHHHHHHHHHHHHHHHHh
Confidence 11 46899999974 223344555555543
No 164
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.90 E-value=1e-21 Score=205.58 Aligned_cols=275 Identities=17% Similarity=0.228 Sum_probs=187.3
Q ss_pred cCCCCchh-HHHHHHHHHHHhC--------CCcEEEeCCHH-HHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhccc
Q 009167 204 YGRYGNPT-TVVVEEKMSALEG--------AESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 204 Y~R~~~p~-~~~Le~~LA~l~g--------~e~~i~~sSGs-~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~ 272 (541)
..+|+.+. ...||++||++++ .+..+++++|+ +++..++..+ .++||.|++++|+|+.....+ +.
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~----~~ 112 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAA----RL 112 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHH----HH
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccccccccceecCCccccccccc----cc
Confidence 34455554 8899999999998 34378888887 6677777777 679999999999999876444 44
Q ss_pred CCeEEEEeC-------CCCHHHHHHhccCC-----CceEEEEeCCCCCCCccccHHH---HHHHHHhCCCEEEEeCCCCC
Q 009167 273 MGITATVID-------PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKL---VSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 273 ~Gi~v~~vd-------~~d~e~Le~al~~~-----~tklV~lesP~NPtG~i~dl~~---Ia~la~~~gi~lIvDea~a~ 337 (541)
.|+++..++ ..|+++|++.+++. ++++|++++|+||||.+++.++ |+++|+++|+++|+||+|..
T Consensus 113 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~ 192 (363)
T PF00155_consen 113 LGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSD 192 (363)
T ss_dssp TTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTT
T ss_pred cCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceec
Confidence 577777666 34899999988762 3789999999999999998665 45559999999999999886
Q ss_pred CCcccc--------cccCC-cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----
Q 009167 338 PLNQKA--------LSLGA-DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---- 404 (541)
Q Consensus 338 ~~~~~~--------~~~ga-Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~---- 404 (541)
...... .+.+. .+++.|+||.+|..| +..|++++++++++.++.....+.. +...+.++...+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRvG~i~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~ 269 (363)
T PF00155_consen 193 LIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPG-LRVGYIVAPPELIERLRRFQRSGLS--SSPMQAAAAAALSDPEL 269 (363)
T ss_dssp GBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGG-GTEEEEEEEHHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHH
T ss_pred cccCCCccCcccccccccccceeeeeccccccccc-cccccccchhhhhhhhhhccccccc--cchhhHHHHHhhhcccc
Confidence 543311 12233 489999999998665 3478898898999998877665444 3222222222221
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCc-C
Q 009167 405 ---TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-Y 480 (541)
Q Consensus 405 ---tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~-~ 480 (541)
.+..+.++..+++..+.+.|++. .+... .+ ..|.++++.++. .....|.+.|... +
T Consensus 270 ~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~-~~----------------~~~~~~~~~~~~--~~~~~l~~~L~~~~g 329 (363)
T PF00155_consen 270 VEKWLEELRERLRENRDLLREALEEI-GITVL-PP----------------EAGFFLWVRLDP--NDAEELAQELLEEYG 329 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEE-HH----------------SBSSEEEEEESH--HHHHHHHHHHHHHHT
T ss_pred cccccccchhhHHHHHHHHHHHHHHh-hhhee-ec----------------cCccEEEEEccc--chHHHHHHHHHHhCC
Confidence 44555666677888888888776 33222 11 134567777753 2455666666554 7
Q ss_pred eecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHH
Q 009167 481 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFE 528 (541)
Q Consensus 481 iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~e 528 (541)
+.+..|..+ +. +++|||+++.-+.+
T Consensus 330 i~v~pg~~~----------------------~~-~~~iRi~~a~~~~e 354 (363)
T PF00155_consen 330 ILVRPGSYF----------------------GV-PGYIRISLASHSEE 354 (363)
T ss_dssp EEEEEGGGG----------------------TS-TTEEEEEGGCSCHH
T ss_pred EEEEecCCC----------------------CC-CCEEEEEeccCCHH
Confidence 766665432 22 57999999444444
No 165
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.90 E-value=6e-21 Score=201.66 Aligned_cols=252 Identities=15% Similarity=0.131 Sum_probs=176.8
Q ss_pred CCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCC
Q 009167 205 GRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD 284 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d 284 (541)
.+...+..+++++++++++|.+..+++++|++++..++.+++++||.|+++.+.|+.....+ ...|+++..++..|
T Consensus 73 ~~g~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~----~~~g~~~~~~~~~d 148 (385)
T TIGR01825 73 IAGTLRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGL----RLTKATKKIYKHAD 148 (385)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHH----HhcCCceEEeCCCC
Confidence 33345678999999999999888899999999999999999999999999999998765333 23466776677778
Q ss_pred HHHHHHhccC---CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc---------cccccCCcEEE
Q 009167 285 MEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVL 352 (541)
Q Consensus 285 ~e~Le~al~~---~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~---------~~~~~gaDivv 352 (541)
++++++.+++ .++++|++++++||+|.+.|+++|.++|++||+++|+||+|+.+... -....+.|+++
T Consensus 149 ~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 228 (385)
T TIGR01825 149 MDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQV 228 (385)
T ss_pred HHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEE
Confidence 8888887653 14899999999999999999999999999999999999998654221 01224678999
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHhC
Q 009167 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 353 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~tl~---~r~~~~~~~a~~la~~L~~~ 427 (541)
.|+||++++. +|++++++++++.+..... .+++..++...+.+..+++.+. ...++..++.+.+.+.|++.
T Consensus 229 ~s~sK~~~~~----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 304 (385)
T TIGR01825 229 GTLSKAIGVV----GGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL 304 (385)
T ss_pred EeccHHhhcC----CCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999754 4889999888888865432 2233334443333344444332 23444556667777777653
Q ss_pred CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecc
Q 009167 428 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 484 (541)
Q Consensus 428 p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS 484 (541)
++. +..| .++++.+.++. ......|.+.|...++.++
T Consensus 305 -g~~-~~~~-----------------~~~~~~~~~~~-~~~~~~~~~~L~~~gi~v~ 341 (385)
T TIGR01825 305 -GYD-TGGS-----------------ETPITPVVIGD-EKAAQEFSRRLFDEGIFAQ 341 (385)
T ss_pred -CCC-CCCC-----------------CCCEEEEEECC-HHHHHHHHHHHHHCCcEEc
Confidence 221 1111 23466666643 2345567676655566554
No 166
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.90 E-value=2.3e-21 Score=203.54 Aligned_cols=281 Identities=15% Similarity=0.117 Sum_probs=187.0
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+.+....|++.||++++.+ +.|++++|+ +++.+++.++. +||.|+++.|+|..... .++..|.++..++.
T Consensus 52 ~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~----~~~~~g~~~~~v~~ 126 (360)
T PRK07392 52 RHYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRR----ALRAFGATVKELPL 126 (360)
T ss_pred hcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHH----HHHHcCCeEEEEec
Confidence 4456666679999999999763 445555555 89999988864 68999999999988553 34456777766643
Q ss_pred C----------CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc----cc---cc
Q 009167 283 A----------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KA---LS 345 (541)
Q Consensus 283 ~----------d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~----~~---~~ 345 (541)
+ +++++++.. + +++++++++||||||.+++.++|.++++++++ +|+||+|...... .. ..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~ 203 (360)
T PRK07392 127 PLDQPSPGLTLRLQTLPPQL-T-PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLA 203 (360)
T ss_pred ccccCCcccccCHHHHHHhc-c-CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhh
Confidence 2 345555443 2 47999999999999999999999999999985 6679998754321 11 11
Q ss_pred -cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHHHHHHHHHHHHH
Q 009167 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMA 421 (541)
Q Consensus 346 -~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~a~~la 421 (541)
...-+++.|+||.++-+| +..|++++++++++.+..... ...++.....++...++. .....+...+++..+.
T Consensus 204 ~~~~vi~i~S~SK~~~l~G-lRiG~~v~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 280 (360)
T PRK07392 204 EYPNLIILRSLTKFYSLPG-LRLGYAIAHPDRLQRWQQWRD--PWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALF 280 (360)
T ss_pred cCCCEEEEEechhhhcCCc-hheeeeeCCHHHHHHHHhhCC--CCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 123588999999998555 468999999988888776543 233455555554444432 1112233445667777
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHH-ccCcCeecccCCcccccccCccccc
Q 009167 422 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA-LKIPYIAPSFGGCESIVDQPAIMSY 500 (541)
Q Consensus 422 ~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~-L~~~~iavS~G~~~sl~~~pa~~~~ 500 (541)
+.|+.++.+. + +| +.|+++++.++. ...++.+. ++..++.+..|..+.
T Consensus 281 ~~L~~~~~~~-~-~~----------------~~~~fl~~~~~~---~~~~l~~~ll~~~gv~v~pg~~f~---------- 329 (360)
T PRK07392 281 QGLASLPGLT-P-LP----------------SAANFLLVQSQG---SALQLQEKLLQQHRILIRDCLSFP---------- 329 (360)
T ss_pred HHHHhCCCcE-E-CC----------------CCCCEEEEEcCC---CHHHHHHHHHhhCCEEEEeCCCCC----------
Confidence 8887665542 1 22 146788888763 23455555 355677777765431
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHH
Q 009167 501 WDLSQSERLKYGIMDNLVRFSFGVED-FEDLKADVLQAL 538 (541)
Q Consensus 501 ~~~~~~~~~~~gi~~~~IRlSvG~e~-~edli~dL~~AL 538 (541)
+..+++|||+++..+ .+++.+.|++.+
T Consensus 330 -----------~~~~~~iRi~~~~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 330 -----------ELGDRYFRVAVRTEAENQRLLEALAAIL 357 (360)
T ss_pred -----------CCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 013579999999854 466666666544
No 167
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.90 E-value=1.9e-21 Score=204.44 Aligned_cols=266 Identities=18% Similarity=0.180 Sum_probs=174.7
Q ss_pred CCCch-hHHHHHHHHHHHh----C---C-CcEEEeCCHH-HHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009167 206 RYGNP-TTVVVEEKMSALE----G---A-ESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 206 R~~~p-~~~~Le~~LA~l~----g---~-e~~i~~sSGs-~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~G 274 (541)
+|+.+ ...+|++++|+++ | . .+.|++++|+ +++..++..+ +++||+|++++|+|..... .+...|
T Consensus 57 ~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~----~~~~~g 132 (364)
T PRK07865 57 GYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV----GARLAG 132 (364)
T ss_pred CCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH----HHHhcC
Confidence 34433 3457778888776 3 3 3456666665 8998887777 7999999999999987543 334568
Q ss_pred eEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----ccc---
Q 009167 275 ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL--- 344 (541)
Q Consensus 275 i~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----~~~--- 344 (541)
+++..++ ++++++. . ++++|++++|+||||.+++ +++|.++|+++|++||+||+|...... ..+
T Consensus 133 ~~~~~~~--~~~~l~~---~-~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 206 (364)
T PRK07865 133 ATVVRAD--SLTELGP---Q-RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPR 206 (364)
T ss_pred CEEEecC--ChhhCCc---c-cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCcccccc
Confidence 8877664 3444332 3 5899999999999999998 457888899999999999998753211 111
Q ss_pred ----ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHHHHHHHHH
Q 009167 345 ----SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTA 417 (541)
Q Consensus 345 ----~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~a 417 (541)
.....+++.|+||.++.+| ..+||+++++++++.++......+...+......+...++. +....+...++.
T Consensus 207 ~~~~~~~~~i~~~S~SK~~~~~G-lRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 285 (364)
T PRK07865 207 VCGGDHTGLLAVHSLSKQSNLAG-YRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRR 285 (364)
T ss_pred ccCCccceEEEEeechhccCCCc-eeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 1123589999999997555 56899999999999888766555555555554444444432 223333444566
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcc
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~ 497 (541)
..+.+.|+++. +. +..|. .|.++|+.++.+ ...+.+.|...++.+..|..+. +
T Consensus 286 ~~l~~~L~~~g-~~-~~~~~----------------~~~~~~~~~~~~---~~~~~~~l~~~gv~v~pg~~f~----~-- 338 (364)
T PRK07865 286 AVLRPALEAAG-FR-VDHSE----------------AGLYLWATRGED---CWDTVAWLAERGILVAPGDFYG----P-- 338 (364)
T ss_pred HHHHHHHHHcC-Cc-ccCCC----------------ccEEEEEeCCCC---HHHHHHHHHHCCEEEeCccccC----c--
Confidence 66777777642 21 11111 233577776432 2345555656677777664321 0
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecC
Q 009167 498 MSYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
-.++++||+++.
T Consensus 339 ---------------~~~~~iRi~~~~ 350 (364)
T PRK07865 339 ---------------AGAQHVRVALTA 350 (364)
T ss_pred ---------------CCCCEEEEEecC
Confidence 024789999986
No 168
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.90 E-value=4.3e-21 Score=200.68 Aligned_cols=286 Identities=21% Similarity=0.222 Sum_probs=216.8
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHH
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~ 287 (541)
..+.+.+||++||+++|.+.+++|+||-.|+..++.+++++||.|+.....|.+....+ +.-+.++..+..+|+++
T Consensus 82 ~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~----rls~a~~~~f~HnD~~~ 157 (388)
T COG0156 82 TSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGI----RLSRAEVRRFKHNDLDH 157 (388)
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHH----HhCCCcEEEecCCCHHH
Confidence 45789999999999999999999999999999999999999999999999998865433 33466777888999999
Q ss_pred HHHhccCC-----CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccc-------c---ccCCcEEE
Q 009167 288 LEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA-------L---SLGADLVL 352 (541)
Q Consensus 288 Le~al~~~-----~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~-------~---~~gaDivv 352 (541)
||+.+++. +.++|++|......|.+.|+++|.+++++||++++|||+++.++...- . ...+||++
T Consensus 158 Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~ 237 (388)
T COG0156 158 LEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIV 237 (388)
T ss_pred HHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEE
Confidence 99999651 158999999999999999999999999999999999999887654311 1 12348999
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCCchHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhC
Q 009167 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 353 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~s~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~ 427 (541)
.|++|.+|.. ||++.++..+++.++... ..+.+.++|..+..+...++.+ ..+.++..++...+.+.+...
T Consensus 238 gTlsKAlGs~----Gg~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~ 313 (388)
T COG0156 238 GTLGKALGSS----GGYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL 313 (388)
T ss_pred EEchhhhccc----CceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999954 699999999999887643 3567788888766555555554 456666666666666444432
Q ss_pred CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHH
Q 009167 428 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 507 (541)
Q Consensus 428 p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~ 507 (541)
. ++..++ ...++.+.+. +...+.++.+.|...|+.++. +.+|...
T Consensus 314 ~------~~~~~s-------------~s~I~pv~~g-d~~~a~~~s~~l~~~Gi~v~~------i~~PTVp--------- 358 (388)
T COG0156 314 G------LVLLPS-------------ESPIIPVILG-DEERALEASRALLEEGIYVSA------IRPPTVP--------- 358 (388)
T ss_pred C------CccCCC-------------CCCeeeeEeC-CHHHHHHHHHHHHHCCeeEee------ecCCCCC---------
Confidence 2 221111 3457888884 556677777777655654432 2334321
Q ss_pred HHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 508 RLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 508 ~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
.....||+++...++++.|+.+.++|.++
T Consensus 359 -----~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 359 -----KGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred -----CCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 12467999999999999999999998763
No 169
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.90 E-value=5.5e-21 Score=208.40 Aligned_cols=286 Identities=14% Similarity=0.099 Sum_probs=179.9
Q ss_pred hHHHHHHHHHHHhC----C---CcEEEeCCH-HHHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALEG----A---ESTVIMASG-MSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g----~---e~~i~~sSG-s~Ai~~al~all-~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+||++||++++ . .+.|++++| ++++.+++.+++ .+||+|+++.|+|......+ +..|.++..++
T Consensus 116 G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~----~~~g~~~v~v~ 191 (481)
T PTZ00377 116 GYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAI----TLLGGKQVPYY 191 (481)
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHH----HHcCCEEEEEE
Confidence 46788999998864 1 234555555 599999999998 79999999999999865433 34566665553
Q ss_pred C-------CCHHHHHHhccC-----CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc---c-
Q 009167 282 P-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---K- 342 (541)
Q Consensus 282 ~-------~d~e~Le~al~~-----~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~---~- 342 (541)
. .|+++|++++++ .++|+|++++|+||||.+++ +++|+++|+++|++||+||+|...... .
T Consensus 192 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~ 271 (481)
T PTZ00377 192 LDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPF 271 (481)
T ss_pred eccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCc
Confidence 2 367999988863 14899999999999999998 778999999999999999998753220 0
Q ss_pred -cc-----ccC-------CcEEEECCcccc-CCCCCceEEEEEe---ChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH-
Q 009167 343 -AL-----SLG-------ADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK- 404 (541)
Q Consensus 343 -~~-----~~g-------aDivv~S~sK~l-gg~gd~~gG~lv~---~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~- 404 (541)
.+ .+. ..+++.|+||.+ +-.| .+.||+++ ++++++++....... ...+.....++...++
T Consensus 272 ~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~G-lRiG~~~~~~~p~~li~~l~~~~~~~-~~~~~~~Q~a~~~~l~~ 349 (481)
T PTZ00377 272 ISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECG-RRGGYFELTNIPPEVREQIYKLASIN-LCSNVVGQLMTGLMCNP 349 (481)
T ss_pred ccHHHHHHhhcccccCCeEEEEEecCCcccccCCc-CceEEEEEeCCCHHHHHHHHHHhhee-cCCChHHHHHHHHHhCC
Confidence 10 111 237889999975 4333 46889886 888998887755422 2234433333333331
Q ss_pred ---------HHHHHHH----HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHH----
Q 009167 405 ---------TLHLRVQ----QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT---- 467 (541)
Q Consensus 405 ---------tl~~r~~----~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~---- 467 (541)
.....++ ...+++..+.+.|++++.+. +..|. .|..+|+.++....
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~-~~~p~----------------gg~fl~~~~~l~~~~~~~ 412 (481)
T PTZ00377 350 PREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS-CQPVE----------------GAMYAFPRIELPEKAIQE 412 (481)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-eecCC----------------eeEEEEeeccCchhhHHH
Confidence 1212222 23456667778887766543 22221 34456655531100
Q ss_pred --------HHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHH
Q 009167 468 --------ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQA 537 (541)
Q Consensus 468 --------~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~A 537 (541)
....+...++..++.+..|..+.. .-.++++|||++.+ +.++.++.|.+.
T Consensus 413 ~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~--------------------~~~~~~~Rls~~~~~e~l~~~l~rl~~~ 472 (481)
T PTZ00377 413 AKERGLAPDVLYCLELLESTGIVVVPGSGFGQ--------------------KPGTYHFRITILPPEEQIEEMVKKIKEF 472 (481)
T ss_pred HHhcCCCcHHHHHHHHHHHcCEEEeCCcccCC--------------------CCCCCEEEEEECCCHHHHHHHHHHHHHH
Confidence 111123444556788888765421 00246899999943 233445555555
Q ss_pred Hh
Q 009167 538 LH 539 (541)
Q Consensus 538 L~ 539 (541)
++
T Consensus 473 ~~ 474 (481)
T PTZ00377 473 HE 474 (481)
T ss_pred HH
Confidence 54
No 170
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.89 E-value=3.7e-22 Score=206.46 Aligned_cols=177 Identities=19% Similarity=0.248 Sum_probs=150.1
Q ss_pred HHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh-ccCCC----EEEEcCCCCcchHH
Q 009167 192 IDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAGG----HIVTTTDCYRKTRI 264 (541)
Q Consensus 192 ~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~al-l~pGd----~Vlv~~~~y~~~~~ 264 (541)
..+++|++.. .|++...+..++.|+.+|++.|++ +++|+.++|++++++++.+ ...+| +||+...+|++...
T Consensus 68 ~~~~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~ 146 (428)
T KOG1549|consen 68 LEYLGNPHSR-SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLD 146 (428)
T ss_pred HHhhcCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhH
Confidence 3445565544 688888888999999999999994 5555555669999999987 34567 99999999999776
Q ss_pred HHHhhcccCCeEEEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-
Q 009167 265 FIETVLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP- 338 (541)
Q Consensus 265 ~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~- 338 (541)
.+ ..++..|+++++++.. |++.++++|++ +|++|.+.+.||.+|.++|+++|.++|+++|+.+++|.+++.+
T Consensus 147 s~-~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~-~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~ 224 (428)
T KOG1549|consen 147 SC-RALQEEGLEVTYLPVEDSGLVDISKLREAIRS-KTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGK 224 (428)
T ss_pred HH-HHHHhcCeEEEEeccCccccccHHHHHHhcCC-CceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCC
Confidence 66 3566678999998753 78999999998 5999999999999999999999999999999999999999875
Q ss_pred CcccccccCCcEEEECCccccCCCCCceEEEEEeCh
Q 009167 339 LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG 374 (541)
Q Consensus 339 ~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~ 374 (541)
...+..++++|+++.|.||+||+++ .|+++.++
T Consensus 225 i~vDV~eln~D~~s~s~HK~ygp~~---iGaLYvr~ 257 (428)
T KOG1549|consen 225 IPVDVQELNADFLSISAHKIYGPPG---IGALYVRR 257 (428)
T ss_pred ccccHHHcCchheeeecccccCCCc---ceEEEEcc
Confidence 5678888999999999999999997 68888875
No 171
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.89 E-value=6.1e-21 Score=199.34 Aligned_cols=274 Identities=21% Similarity=0.236 Sum_probs=183.6
Q ss_pred CchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEc---CCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTT---TDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~---~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
..+..++||+++|+++|. ++++++++|.+|+..++.+++++||+|+++ .+.|.... ...+..|.++ +..
T Consensus 52 ~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~----~~~~l~ga~~--~~~ 125 (346)
T TIGR03576 52 PAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIP----RSCKLAGAEY--FES 125 (346)
T ss_pred CHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHH----HHHHHcCCEE--ecc
Confidence 347789999999999998 788999999999999999999999999975 35665543 2334446654 333
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCCcc---ccHHHHHHHHHhCCCEEEEeCCCCCCCc----c-cccccCCcEEEEC
Q 009167 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----Q-KALSLGADLVLHS 354 (541)
Q Consensus 283 ~d~e~Le~al~~~~tklV~lesP~NPtG~i---~dl~~Ia~la~~~gi~lIvDea~a~~~~----~-~~~~~gaDivv~S 354 (541)
.++++++. . + ++++|++ +++|++|.+ .|+++|+++|+++|++|++||+|+.++. . .....+.|+++.|
T Consensus 126 ~~l~~l~~-~-~-~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s 201 (346)
T TIGR03576 126 DELSELKK-I-D-GTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTS 201 (346)
T ss_pred CCHHHHhh-C-c-CceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEec
Confidence 56666543 2 3 4788888 457899998 5788999999999999999999987532 1 1234467999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHhCCCceE
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKR 432 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~~p~v~~ 432 (541)
+||+++|. .+|++++++++++.++.....++.+.++..++.+..+|+.+. .+.+...++...+.+.+.. + .
T Consensus 202 ~SKalaG~---r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~---~-~ 274 (346)
T TIGR03576 202 TDKLMDGP---RGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK---L-N 274 (346)
T ss_pred cchhcccc---ceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh---C-C
Confidence 99988654 489999999999999887776665555656666666776532 1222222333333444442 1 1
Q ss_pred EeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcC
Q 009167 433 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 512 (541)
Q Consensus 433 v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~g 512 (541)
+ +|. .++++++.+++.. ..+...+.|+..++.+..|..+. +
T Consensus 275 ~-~~~----------------~~~f~~~~~~~~~-~~~~~~~ll~~~gV~v~~~~~f~---------------------~ 315 (346)
T TIGR03576 275 V-ERT----------------PTGFVIKGVEEEK-LIEIGLDLLRNYGIITITAVGMP---------------------G 315 (346)
T ss_pred C-CcC----------------CCeEEEEeCCCCC-HHHHHHHHHHhCCEEEeCCcccC---------------------C
Confidence 1 121 2457888886421 11223344445566666543210 1
Q ss_pred CCCCeEEEEecCCC-----HHHHHHHHHHHH
Q 009167 513 IMDNLVRFSFGVED-----FEDLKADVLQAL 538 (541)
Q Consensus 513 i~~~~IRlSvG~e~-----~edli~dL~~AL 538 (541)
.+++||||++.++ .+.+++.|++.|
T Consensus 316 -~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 316 -ASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred -CCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 2579999999866 556666665544
No 172
>PLN02822 serine palmitoyltransferase
Probab=99.89 E-value=6.9e-21 Score=207.15 Aligned_cols=289 Identities=14% Similarity=0.125 Sum_probs=199.3
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHH
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~ 287 (541)
..+...+||++||++++.++.+++++|..++..++.+++++||.|++....|..+...+ ...+.++.+++.+|.++
T Consensus 152 ~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~----~ls~~~~~~~~~nd~~~ 227 (481)
T PLN02822 152 TIDVHLDCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQNGL----YLSRSTIVYFKHNDMES 227 (481)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHHHH----HHcCCeEEEECCCCHHH
Confidence 45678999999999999988999999988899999999999999998887776653322 22356788888888877
Q ss_pred HHHhccC--------CCc-eEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc-------cccc---cCC
Q 009167 288 LEAALNN--------NNV-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KALS---LGA 348 (541)
Q Consensus 288 Le~al~~--------~~t-klV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~-------~~~~---~ga 348 (541)
++..+++ .++ ++|++|+++|++|.+.|+++|.++|++||+++|+||+++.+... .... ..+
T Consensus 228 l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~ 307 (481)
T PLN02822 228 LRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKI 307 (481)
T ss_pred HHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCC
Confidence 7765531 124 79999999999999999999999999999999999998754321 1111 246
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCCchHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKI 423 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~s~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~ 423 (541)
|+++.|++|.+|.. ||++++++++++.++... ..+++.+++..+..++..++.+ ....++..++.+.+.+.
T Consensus 308 dii~~s~sKalg~~----GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~ 383 (481)
T PLN02822 308 DIITAAMGHALATE----GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKG 383 (481)
T ss_pred eEEEecchhhhhhC----CeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 89999999999854 589999999988876432 2344445566555554555443 34556666778888888
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-------HHHHHHHHHHcc-CcCeecccCCcccccccC
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALK-IPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-------~~~~~~~l~~L~-~~~iavS~G~~~sl~~~p 495 (541)
|++.+++. +..| +.+.++.+.+++. .....+|.+.|- ..|+.++.+.. |
T Consensus 384 L~~~~g~~-~~~~----------------~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~------~ 440 (481)
T PLN02822 384 LSDIPGLS-IGSN----------------TLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKR------S 440 (481)
T ss_pred HHhcCCcc-cCCC----------------CCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCC------C
Confidence 87654322 1111 1456788888531 123466777764 56777665422 1
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
.. . .+-.+..+|+++...++++.|+.+.++|+
T Consensus 441 ~~------~------~~~~~~~lRi~is~~~t~edI~~~~~~l~ 472 (481)
T PLN02822 441 TL------D------KCRLPVGIRLFVSAGHTESDILKASESLK 472 (481)
T ss_pred Cc------C------CCCCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 00 0 01113469999887655555555555544
No 173
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.89 E-value=2.2e-21 Score=202.22 Aligned_cols=271 Identities=18% Similarity=0.197 Sum_probs=181.2
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+.||+++. .+|+++||+++|.. +.|++++|+ +++.++. .++++|| |+++.|+|..... .++..|+++..+
T Consensus 48 ~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~-~~~~~g~-v~v~~P~y~~y~~----~~~~~g~~~~~v 120 (339)
T PRK06959 48 WRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALP-ALLPRGR-VGIAPLAYSEYAP----AFARHGHRVVPL 120 (339)
T ss_pred HHhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHH-HhcCCCe-EEEcCCCcHHHHH----HHHHCCCEEEee
Confidence 45688887 99999999999983 567777776 8887654 4678877 8889999987553 345568888777
Q ss_pred CCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHH---HHhCCCEEEEeCCCCCCCcccc---c-ccCCcEEEE
Q 009167 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDL---CHKKGAIVCIDGTFATPLNQKA---L-SLGADLVLH 353 (541)
Q Consensus 281 d~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~l---a~~~gi~lIvDea~a~~~~~~~---~-~~gaDivv~ 353 (541)
+.++ + .+.+ .++++++++||||||.+++.+++.++ |+++++++|+||+|........ . ....-+++.
T Consensus 121 ~~~~-~----~~~~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~ 194 (339)
T PRK06959 121 DEAA-D----TLPA-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLR 194 (339)
T ss_pred cccc-h----hccc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEe
Confidence 6543 2 2333 36899999999999999997766655 5578999999999886532111 1 122348899
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCCCc
Q 009167 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKV 430 (541)
Q Consensus 354 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p~v 430 (541)
||||.+|-+| ++.||+++++++++.++.....++ ++.....++...++ ......++..++++.+.+.|+++. +
T Consensus 195 SfSK~~gl~G-lRiGy~v~~~~li~~l~~~~~~~~--vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~ 270 (339)
T PRK06959 195 SVGKFFGLAG-VRAGFVLAAPALLAALRDALGAWT--VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHG-F 270 (339)
T ss_pred cChhhcCCcc-hheEEEecCHHHHHHHHHhcCCCC--CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-C
Confidence 9999998555 468999999999999987665433 33444333333332 233334455567777888887752 1
Q ss_pred eEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHh
Q 009167 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 510 (541)
Q Consensus 431 ~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~ 510 (541)
. + ++ .+.++++.++. ..++.+.|...|+.+.. +
T Consensus 271 ~-~-~~-----------------~~~f~~~~~~~----~~~l~~~l~~~GI~vr~---~--------------------- 303 (339)
T PRK06959 271 A-V-HA-----------------TPLFSWTDDPR----AAALHAALARRGIWTRY---F--------------------- 303 (339)
T ss_pred C-c-cC-----------------cceEEEEeCCC----HHHHHHHHHhCCeEEEE---C---------------------
Confidence 1 1 01 24567887742 34566666666766531 0
Q ss_pred cCCCCCeEEEEec-C-CCHHHHHHHHHHHHhh
Q 009167 511 YGIMDNLVRFSFG-V-EDFEDLKADVLQALHA 540 (541)
Q Consensus 511 ~gi~~~~IRlSvG-~-e~~edli~dL~~AL~~ 540 (541)
+ ..++||||++ . ++.+.+++.|++.++.
T Consensus 304 -~-~~~~lRisi~~~~~e~~~l~~al~~~~~~ 333 (339)
T PRK06959 304 -A-PPPSVRFGLPADEAEWQRLEDALAECVPT 333 (339)
T ss_pred -C-CCCeEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 0 1358999994 3 4456777777666553
No 174
>PRK10534 L-threonine aldolase; Provisional
Probab=99.89 E-value=7.3e-21 Score=197.33 Aligned_cols=254 Identities=15% Similarity=0.178 Sum_probs=173.1
Q ss_pred CCC-CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccC-CeEEEEeCC
Q 009167 205 GRY-GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM-GITATVIDP 282 (541)
Q Consensus 205 ~R~-~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~-Gi~v~~vd~ 282 (541)
.+| ++|...+|+++||+++|.+..+++++|++++..++.+++.+||+|+++.+.|...+... ..... ++++..++.
T Consensus 28 ~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 105 (333)
T PRK10534 28 DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYEAG--GAAVLGSIQPQPIDA 105 (333)
T ss_pred cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhcCC--chHHhcCceEEeecC
Confidence 456 79999999999999999988899999999999888889999999999887774322110 01112 245444432
Q ss_pred -----CCHHHHHHhccCC-----CceEEEEeCCCCCCCccccHHH---HHHHHHhCCCEEEEeCCCCCCC------cccc
Q 009167 283 -----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKL---VSDLCHKKGAIVCIDGTFATPL------NQKA 343 (541)
Q Consensus 283 -----~d~e~Le~al~~~-----~tklV~lesP~NPtG~i~dl~~---Ia~la~~~gi~lIvDea~a~~~------~~~~ 343 (541)
.|+++|+++++++ ++++|++++|+ +|.+.|.++ |.++|+++|++|++||+|.... ....
T Consensus 106 ~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~ 183 (333)
T PRK10534 106 AADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKE 183 (333)
T ss_pred CCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHH
Confidence 2799999988652 48999999766 599998664 5678899999999999854211 0111
Q ss_pred cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCch--HHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 009167 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN--PNAAYLIIRGMKTLHLRVQQQNSTALRMA 421 (541)
Q Consensus 344 ~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s--~~~a~l~l~~l~tl~~r~~~~~~~a~~la 421 (541)
.....|.++.|+||.++.. +||++++++++++.++.....++..++ ...+..+...++....++++..++++++.
T Consensus 184 ~~~~~~~~~~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~ 260 (333)
T PRK10534 184 ITQYCDSFTICLSKGLGTP---VGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLA 260 (333)
T ss_pred HHhcCCEEEEEeEcCCCCc---ccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 1123466677999988753 456888999999999877765553332 23344444455544455666666778899
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccC
Q 009167 422 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 422 ~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G 486 (541)
+.|+++ ++. + +|. .++++++.+++ .....+.+.|+..|+.+..|
T Consensus 261 ~~L~~~-g~~-~-~~~----------------~~nfv~~~~~~--~~~~~~~~~l~~~gi~v~~~ 304 (333)
T PRK10534 261 EQLREA-GAD-V-MRQ----------------DTNMLFVRVGE--EQAAALGEYMRERNVLINAS 304 (333)
T ss_pred HHHHhC-CCc-c-CCC----------------CceEEEEECCc--hhHHHHHHHHHHcCeeecCC
Confidence 999875 231 2 221 36788888863 23455666676667666543
No 175
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.89 E-value=1.1e-20 Score=199.91 Aligned_cols=304 Identities=20% Similarity=0.190 Sum_probs=207.8
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-----
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----- 282 (541)
.+...+||+++|+++|.+++++++||++|+.+++.++ +++||+|+++.++|.++... +...|++++++|.
T Consensus 28 g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~----~~~~G~~~~~~~~~~~~~ 103 (380)
T TIGR03588 28 GPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANC----ALYCGAKVDFVDIDPDTG 103 (380)
T ss_pred ChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHH----HHHcCCEEEEEecCCCcC
Confidence 5778999999999999998999999999999999998 89999999999999886533 4456888888765
Q ss_pred -CCHHHHHHhcc----CCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCC----cEEEE
Q 009167 283 -ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA----DLVLH 353 (541)
Q Consensus 283 -~d~e~Le~al~----~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~ga----Divv~ 353 (541)
.|+++++++++ + ++++|++ +|++|...|+++|.++|+++|++||+|++++.+...+....|. |++++
T Consensus 104 ~~d~~~l~~~i~~~~~~-~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~ 179 (380)
T TIGR03588 104 NIDEDALEKKLAAAKGK-LPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVF 179 (380)
T ss_pred CcCHHHHHHHhhcccCC-CceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEE
Confidence 27899999997 5 5899886 5678999999999999999999999999987654333333445 99999
Q ss_pred CCc--cccCCCCCceEEEEEe-ChHHHHHHHHHhhh-------------------------cCCCchHHHHHHHHHhHHH
Q 009167 354 SAT--KFIGGHNDVLAGSISG-SGKLVTQIRNLHHV-------------------------LGGALNPNAAYLIIRGMKT 405 (541)
Q Consensus 354 S~s--K~lgg~gd~~gG~lv~-~~~li~~l~~~~~~-------------------------~G~~~s~~~a~l~l~~l~t 405 (541)
|++ |+++.+. ||+++. ++++.++++..... ++..++...+.+.+..|+.
T Consensus 180 S~~~~K~~~~~~---GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~ 256 (380)
T TIGR03588 180 SFHPVKIITTAE---GGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKK 256 (380)
T ss_pred ecCCCCcccccC---ceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHH
Confidence 987 8887542 676665 56677766543210 1123455666667777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-CHHHHHHHHHHccCcCeecc
Q 009167 406 LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDALKIPYIAPS 484 (541)
Q Consensus 406 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-~~~~~~~~l~~L~~~~iavS 484 (541)
++.+.++..++++++.+.|...|.+. +..+...... ...++.+.++. ......++.+.|+..+|.++
T Consensus 257 l~~~~~~r~~~~~~~~~~L~~~~~~~-~~~~~~~~~~-----------~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~ 324 (380)
T TIGR03588 257 LDRFVAKRREIAARYDRLLKDLPYFT-PLTIPLGSKS-----------AWHLYPILLDQEFGCTRKEVFEALRAAGIGVQ 324 (380)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc-CCCCCCCCEe-----------EEEEEEEEECCcCCCCHHHHHHHHHHCCCCcc
Confidence 88888888999999999998876543 1111100000 01123333431 11234566667766676665
Q ss_pred cCCcccccccCcccc---ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 485 FGGCESIVDQPAIMS---YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 485 ~G~~~sl~~~pa~~~---~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..-. .+..+|.... ...++..+ .+....|+|.++..-+++.++.+.++|++
T Consensus 325 ~~~~-~~~~~~~~~~~~~~~~~p~a~----~~~~~~l~lP~~~~l~~~dv~~i~~~l~~ 378 (380)
T TIGR03588 325 VHYI-PVHLQPYYRQGFGDGDLPSAE----NFYLAEISLPLHPALTLEQQQRVVETLRK 378 (380)
T ss_pred cCCc-ccccChhhhccCCcCCCcHHH----HHHhceEEcCCCCCCCHHHHHHHHHHHHH
Confidence 4321 1112221111 11122211 12357899998877667777888777765
No 176
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.89 E-value=1e-20 Score=195.56 Aligned_cols=289 Identities=17% Similarity=0.182 Sum_probs=195.5
Q ss_pred cCCCCchhHHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 204 YGRYGNPTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~--------e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
+.+...+...++++.++++++. ++.+++++|++++..++.++.++||+|+++.++|.+.... ++..|.
T Consensus 30 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~----~~~~~~ 105 (350)
T cd00609 30 LGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAA----ARLAGA 105 (350)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHCCC
Confidence 3444556677788888887753 3567777778999999999999999999999999986643 344567
Q ss_pred EEEEeCCC-----CH--HHHHHhccCCCceEEEEeCCCCCCCccccHHHH---HHHHHhCCCEEEEeCCCCCCCc-----
Q 009167 276 TATVIDPA-----DM--EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV---SDLCHKKGAIVCIDGTFATPLN----- 340 (541)
Q Consensus 276 ~v~~vd~~-----d~--e~Le~al~~~~tklV~lesP~NPtG~i~dl~~I---a~la~~~gi~lIvDea~a~~~~----- 340 (541)
++..++.. +. +.++..+.+ ++++|++++|+||+|.+.|++++ .++|+++|+++|+|++++.+..
T Consensus 106 ~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~ 184 (350)
T cd00609 106 EVVPVPLDEEGGFLLDLELLEAAKTP-KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPP 184 (350)
T ss_pred EEEEEecccccCCccCHHHHHhhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccc
Confidence 77766543 22 556666555 59999999999999999986655 5899999999999999765321
Q ss_pred ---ccccccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----HHHHHHH
Q 009167 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQ 412 (541)
Q Consensus 341 ---~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~ 412 (541)
......+.|+++.|++|+++.+| ..+|++++++ ++.+.++..........+......+...++. +....++
T Consensus 185 ~~~~~~~~~~~~~~~~s~~K~~~~~g-~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 263 (350)
T cd00609 185 PALALLDAYERVIVLRSFSKTFGLPG-LRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRER 263 (350)
T ss_pred ccccCcCccCcEEEEeecccccCCcc-cceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHH
Confidence 12334568999999999997333 3578999888 7888887766554344444444333333333 3333445
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCccccc
Q 009167 413 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 492 (541)
Q Consensus 413 ~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~ 492 (541)
..++++++.+.|++++.... ..+ ..|.++++.+++. .....+.+.|+..++.+..++.+..
T Consensus 264 ~~~~~~~l~~~L~~~~~~~~-~~~----------------~~g~~~~~~~~~~-~~~~~~~~~l~~~gi~i~~~~~~~~- 324 (350)
T cd00609 264 YRRRRDALLEALKELGPLVV-VKP----------------SGGFFLWLDLPEG-DDEEFLERLLLEAGVVVRPGSAFGE- 324 (350)
T ss_pred HHHHHHHHHHHHHhcCCccc-cCC----------------CccEEEEEecCCC-ChHHHHHHHHHhCCEEEeccccccc-
Confidence 55677888888887654321 111 2467888888653 2334455556555666665533210
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
.....||++++.. ++.++.+.++|+
T Consensus 325 --------------------~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 325 --------------------GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred --------------------CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 1356899999988 555566666654
No 177
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.1e-20 Score=200.98 Aligned_cols=281 Identities=15% Similarity=0.142 Sum_probs=183.9
Q ss_pred CchhHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEE
Q 009167 208 GNPTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g--------~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
.......+++.+|++++ .++.++++++++++..++.+++++||.|++++|+|..... .++..|+++.+
T Consensus 71 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~----~~~~~g~~v~~ 146 (394)
T PRK06836 71 PNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRF----YVDNHGGKLVV 146 (394)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHH----HHHHcCCEEEE
Confidence 34557788888998874 2345566666699999999999999999999999988543 34556888887
Q ss_pred eCC------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHh------CCCEEEEeCCCCCCCcc---
Q 009167 280 IDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK------KGAIVCIDGTFATPLNQ--- 341 (541)
Q Consensus 280 vd~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~------~gi~lIvDea~a~~~~~--- 341 (541)
++. .|++++++++++ ++++|++++|+||||.++| +++|+++|++ ||+++|+|++|......
T Consensus 147 v~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~ 225 (394)
T PRK06836 147 VPTDTDTFQPDLDALEAAITP-KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAE 225 (394)
T ss_pred EecCCccCcCCHHHHHhhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCC
Confidence 753 268999999977 5999999999999999998 5577778888 89999999998753221
Q ss_pred -cc-c-ccCCcEEEECCccccCCCCCceEEEEEeChHHHHH------HHHHhhhcC-CCchHHHHHHHHHhHHHHHHHHH
Q 009167 342 -KA-L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ------IRNLHHVLG-GALNPNAAYLIIRGMKTLHLRVQ 411 (541)
Q Consensus 342 -~~-~-~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~------l~~~~~~~G-~~~s~~~a~l~l~~l~tl~~r~~ 411 (541)
.. . ..+..+++.|+||.++.+| +..|++++++++.+. +.......+ ...+......+.+.+... .+.+
T Consensus 226 ~~~~~~~~~~~i~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~ 303 (394)
T PRK06836 226 VPYIFKYYDNSIVVYSFSKSLSLPG-ERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-VDVS 303 (394)
T ss_pred CCChHHccCcEEEEecchhhccCcc-eeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-HHHH
Confidence 00 1 1234689999999998555 457899988765332 111122222 123444444433344321 1233
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccc
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
...++...+.+.|+++. + .+..|. .|..+|+.++.. ...++.+.|...++.+..|..+.
T Consensus 304 ~~~~~r~~l~~~L~~~g-~-~~~~~~----------------gg~~~~~~~~~~--~~~~~~~~l~~~gv~v~~g~~f~- 362 (394)
T PRK06836 304 IYKRNRDLLYDGLTELG-F-ECVKPQ----------------GAFYLFPKSPEE--DDVAFCEKAKKHNLLLVPGSGFG- 362 (394)
T ss_pred HHHHHHHHHHHHHHhCC-C-EeecCC----------------ceEEEEEeCCCC--CHHHHHHHHHhCCEEEECchhcC-
Confidence 44456677777887652 2 222221 355677777542 33455666666677776664321
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHH---HHHHHHHHHh
Q 009167 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED---LKADVLQALH 539 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~ed---li~dL~~AL~ 539 (541)
..+++||+++. +.++ .++.|.++++
T Consensus 363 ----------------------~~~~iRi~~~~-~~~~~~~~i~~l~~~l~ 390 (394)
T PRK06836 363 ----------------------CPGYFRLSYCV-DTETIERSLPAFEKLAK 390 (394)
T ss_pred ----------------------CCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 13689999984 4433 3444555554
No 178
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.88 E-value=1.7e-20 Score=204.83 Aligned_cols=283 Identities=13% Similarity=0.181 Sum_probs=175.5
Q ss_pred hHHHHHHHHHHHhC--------C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 211 TTVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 211 ~~~~Le~~LA~l~g--------~-e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
...+|+++||++++ . .+.|++++|+ +|+.+++.+++.|||.|++++|.|++....+. ...|+++..+
T Consensus 95 G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~---~~~G~~vv~v 171 (496)
T PLN02376 95 GLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLR---WRTGVEIIPV 171 (496)
T ss_pred CcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHH---hhCCCEEEEE
Confidence 34578888888764 2 2345555555 99999999999999999999999998653221 1357777777
Q ss_pred CC-------CCHHHHHHhcc-----CCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc---
Q 009167 281 DP-------ADMEGLEAALN-----NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK--- 342 (541)
Q Consensus 281 d~-------~d~e~Le~al~-----~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~--- 342 (541)
+. .|+++++++++ ..++|+|++++|+||||.+++ +++|+++|+++|++||+||+|+......
T Consensus 172 ~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~ 251 (496)
T PLN02376 172 PCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDF 251 (496)
T ss_pred eCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCc
Confidence 54 25777765532 125899999999999999998 5578888999999999999987643111
Q ss_pred -c-ccc---------CCc--EEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---
Q 009167 343 -A-LSL---------GAD--LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT--- 405 (541)
Q Consensus 343 -~-~~~---------gaD--ivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t--- 405 (541)
+ ... ..+ +++.|+||.+|.+| ...|+++++ +.+.+.++... .++. ++...++++...++.
T Consensus 252 ~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpG-lRvG~li~~~~~l~~~~~~~~-~~~~-vs~~~Q~a~~~~L~d~~~ 328 (496)
T PLN02376 252 VSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPG-FRVGIVYSFNDSVVSCARKMS-SFGL-VSSQTQLMLASMLSDDQF 328 (496)
T ss_pred ccHHHhhccccccccCCCeEEEEEeccccCCCCc-ceEEEEEECCHHHHHHHHHHh-hcCC-CCHHHHHHHHHHhCChhH
Confidence 1 001 112 45799999998665 467899885 45555544433 3332 344444443333321
Q ss_pred HHHH----HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH------HHHHHHHHH
Q 009167 406 LHLR----VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL------TATIKFIDA 475 (541)
Q Consensus 406 l~~r----~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~------~~~~~~l~~ 475 (541)
+... .++..+..+.+.+.|+++ .+. + .+ . ..|.++|+.++... +...+|.+.
T Consensus 329 ~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~-~-~~---~------------~aG~flwi~l~~~~~~~~~~~~e~~l~~~ 390 (496)
T PLN02376 329 VDNFLMESSRRLGIRHKVFTTGIKKA-DIA-C-LT---S------------NAGLFAWMDLRHLLRDRNSFESEIELWHI 390 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-cC---C------------CceEEEEEEchhhhccCCchhHHHHHHHH
Confidence 1111 223334555566677654 221 1 11 1 14678899986311 122345554
Q ss_pred c-cCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH---HHHHHHHH
Q 009167 476 L-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL---KADVLQAL 538 (541)
Q Consensus 476 L-~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edl---i~dL~~AL 538 (541)
+ +..++.++.|..+.. -.++++||+++..+.+.+ +++|.+++
T Consensus 391 ll~~~gV~v~pGs~F~~---------------------~~~g~~Ri~fa~~~~~~l~~al~rl~~~l 436 (496)
T PLN02376 391 IIDKVKLNVSPGSSFRC---------------------TEPGWFRICFANMDDDTLHVALGRIQDFV 436 (496)
T ss_pred HHHcCCEEEeCccccCC---------------------CCCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 4 335788888755311 025799999996444444 44444444
No 179
>PRK07908 hypothetical protein; Provisional
Probab=99.88 E-value=1.5e-20 Score=196.47 Aligned_cols=276 Identities=17% Similarity=0.170 Sum_probs=182.5
Q ss_pred CCCCch-hHHHHHHHHHHHhCC-CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 205 GRYGNP-TTVVVEEKMSALEGA-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~g~-e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
..|+.+ ...+||++||+++|. .+.|++++| ++++.+++. +++| .+++..|+|.... ..++..|+++..++
T Consensus 52 ~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~-~viv~~P~y~~~~----~~~~~~G~~i~~v~ 124 (349)
T PRK07908 52 AAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR-RAAVVHPSFTEPE----AALRAAGIPVHRVV 124 (349)
T ss_pred hcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-eEEEeCCCChHHH----HHHHHcCCEEEeec
Confidence 345543 577899999999986 345555555 489988887 5675 5666789987644 34455788887775
Q ss_pred CC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc--c---cccCCcEE
Q 009167 282 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--A---LSLGADLV 351 (541)
Q Consensus 282 ~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~--~---~~~gaDiv 351 (541)
.+ |++ .+++ +++++++++|+||||.+++.++|.++|++ +.++|+||+|...+... + ......++
T Consensus 125 ~~~~~~~d~~----~l~~-~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~ 198 (349)
T PRK07908 125 LDPPFRLDPA----AVPD-DADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLV 198 (349)
T ss_pred cCcccCcChh----Hhcc-CCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEE
Confidence 43 333 3344 48999999999999999999999999974 78899999986432111 1 12233578
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHh
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG-----MKTLHLRVQQQNSTALRMAKILEA 426 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~-----l~tl~~r~~~~~~~a~~la~~L~~ 426 (541)
+.|+||.++.+| +..|++++++++++.++.....+. .++.....+... .+.+....++..++++.+.+.|++
T Consensus 199 i~S~SK~~~l~G-lRiG~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 275 (349)
T PRK07908 199 LRSLTKTWSLAG-LRVGYALGAPDVLARLTRGRAHWP--VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA 275 (349)
T ss_pred EeecccccCCcc-ceeeeeecCHHHHHHHHhcCCCCC--ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 889999997555 458999999999988876544322 233222222221 223333344555667777788877
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHH
Q 009167 427 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQS 506 (541)
Q Consensus 427 ~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~ 506 (541)
+ .+. +..|. .|+++|+.+++ ...+.+.|+..++.+..|..+.
T Consensus 276 ~-~~~-~~~p~----------------~g~~~~~~~~~----~~~~~~~l~~~gI~v~~g~~f~---------------- 317 (349)
T PRK07908 276 V-GAR-VVDPA----------------AAPFVLVRVPD----AELLRKRLRERGIAVRRGDTFP---------------- 317 (349)
T ss_pred C-CcE-eccCC----------------CceEEEEECCc----HHHHHHHHHhCCEEEEECCCCC----------------
Confidence 5 332 22221 47789999874 2455556666677777765431
Q ss_pred HHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009167 507 ERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 539 (541)
Q Consensus 507 ~~~~~gi~~~~IRlSvG~-e~~edli~dL~~AL~ 539 (541)
+..+++||||++. ++.+.+++.|++.+.
T Consensus 318 -----~~~~~~vRis~~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 318 -----GLDPDYLRLAVRPRAEVPVLVQALAEILK 346 (349)
T ss_pred -----CCCCCeEEEEeCCCccHHHHHHHHHHHHh
Confidence 1135799999986 466777777776654
No 180
>PRK05839 hypothetical protein; Provisional
Probab=99.88 E-value=1.2e-20 Score=199.29 Aligned_cols=273 Identities=18% Similarity=0.131 Sum_probs=169.4
Q ss_pred cCCCCch-hHHHHHHHHHHHh----CC---CcEEEeCCHH-HHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhhccc
Q 009167 204 YGRYGNP-TTVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 204 Y~R~~~p-~~~~Le~~LA~l~----g~---e~~i~~sSGs-~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~~~l~~ 272 (541)
+.+|+.+ ...+|+++||+++ |. .+.|++++|+ +++..++..++ ++||.|+++.|+|..... .+..
T Consensus 53 ~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~----~~~~ 128 (374)
T PRK05839 53 LNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEG----AAIA 128 (374)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHH----HHHh
Confidence 3455554 3457777776554 52 3556666665 88888887764 579999999999987553 3455
Q ss_pred CCeEEEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc---
Q 009167 273 MGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (541)
Q Consensus 273 ~Gi~v~~vd~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~--- 341 (541)
.|+++..++.+ +++..+..+ + ++++|++++||||||.+++ +++|+++|+++|++||+||+|......
T Consensus 129 ~g~~v~~v~~~~~~~~~~d~~~~~~-~-~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~ 206 (374)
T PRK05839 129 SRAKVLLMPLTKENDFTPSLNEKEL-Q-EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPP 206 (374)
T ss_pred cCCEEEEeecccccCCcCCcchhhh-c-cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCC
Confidence 68888877642 122222223 3 4899999999999999998 557778889999999999998753211
Q ss_pred -ccc---------ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHH
Q 009167 342 -KAL---------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHL 408 (541)
Q Consensus 342 -~~~---------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~ 408 (541)
... ..+.-+++.|+||.++.+| ++.||++++++++++++......+...+......+...+ +.+..
T Consensus 207 ~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G-lRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 285 (374)
T PRK05839 207 PSLLEASILVGNESFKNVLVINSISKRSSAPG-LRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEF 285 (374)
T ss_pred CCHhhhhcccCccccCcEEEEeccccccCCcc-ceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHH
Confidence 101 1134588999999987666 568999999999988877654444333433333322222 12222
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCC
Q 009167 409 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGG 487 (541)
Q Consensus 409 r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~ 487 (541)
..++..++.+.+.+.| .+ ..| ..|.++|+.++.. ..|.+.+. ..++.+..|.
T Consensus 286 ~~~~~~~~~~~~~~~l----~~---~~p----------------~gg~fi~~~~~~~----~~~~~~l~~~~gi~v~pg~ 338 (374)
T PRK05839 286 FRNIYAKNLKLAREIL----GI---TIP----------------PATFYVWLPVDND----EEFTKKLYQNEGIKVLPGS 338 (374)
T ss_pred HHHHHHHHHHHHHHhc----CC---CCC----------------CeeEEEEEeCCCh----HHHHHHHHHHCCEEEeCch
Confidence 2223333333333333 11 122 1577889998642 34555553 3677777764
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009167 488 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 530 (541)
Q Consensus 488 ~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edl 530 (541)
.+.. .+..++++|||++. +.+++
T Consensus 339 ~f~~-------------------~~~~~~~iRis~~~-~~~~~ 361 (374)
T PRK05839 339 FLGR-------------------NGIGKGYVRIALVY-DTPKL 361 (374)
T ss_pred hhCC-------------------CCCCCCeEEEEecC-CHHHH
Confidence 4211 01235899999985 34443
No 181
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=5.9e-21 Score=198.75 Aligned_cols=244 Identities=15% Similarity=0.171 Sum_probs=166.7
Q ss_pred cCCCCchhHHHHHHHHHHHhC---C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEE
Q 009167 204 YGRYGNPTTVVVEEKMSALEG---A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g---~-e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~ 278 (541)
+++|+.+...+|+++||++++ . ++.|++++|+ +++.+++.++ |.|++.+|+|.... ..++..|+++.
T Consensus 50 ~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~----~~~~~~g~~~~ 121 (335)
T PRK14808 50 LRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYR----IFAKAVGAKFL 121 (335)
T ss_pred hhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh----CcEEECCCCHHHHH----HHHHHcCCeEE
Confidence 566777788899999999998 3 3456666665 9999998877 78999999998755 34455688887
Q ss_pred EeCCCC---HHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc---cc-ccCCcEE
Q 009167 279 VIDPAD---MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---AL-SLGADLV 351 (541)
Q Consensus 279 ~vd~~d---~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~---~~-~~gaDiv 351 (541)
.++.++ ++.. .+. ++++|++++||||||.+++.+++.+++ +++++||+||+|....... .. .....++
T Consensus 122 ~v~~~~~~~~~~~--~~~--~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~ 196 (335)
T PRK14808 122 EVPLTKDLRIPEV--NVG--EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAV 196 (335)
T ss_pred EecCCCcCCCChh--Hcc--CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEE
Confidence 776431 1111 232 378999999999999999999999998 5799999999987542111 11 1234588
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI---IRGMKTLHLRVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~---l~~l~tl~~r~~~~~~~a~~la~~L~~~p 428 (541)
+.|+||.++-.| .+.|++++++++++.+......++. +.....++ +...+.+..+.+...++++.+.+.|++++
T Consensus 197 ~~S~SK~~~l~G-lRvG~~v~~~~~~~~l~~~~~~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g 273 (335)
T PRK14808 197 IRTFSKAFSLAA-QRIGYVVSSEKFIDAYNRVRLPFNV--SYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMG 273 (335)
T ss_pred EEechhhccCcc-cceEEEEeCHHHHHHHHHhcCCCCC--CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999998554 4579999999999988776533332 33333332 32333344444555566677778887752
Q ss_pred CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecc
Q 009167 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 484 (541)
Q Consensus 429 ~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS 484 (541)
+. + +|. .|+++|+.+++. ...++.+.|...|+.+.
T Consensus 274 -~~-~-~~~----------------~g~f~~~~l~~~--~~~~~~~~l~~~Gi~V~ 308 (335)
T PRK14808 274 -YR-I-TDS----------------RGNFVFIFMEKE--EKERLLEHLRAKNIAVR 308 (335)
T ss_pred -CE-E-CCC----------------CCeEEEEeCCCc--cHHHHHHHHHHCCeEEE
Confidence 22 2 221 478899998742 23566677766676554
No 182
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.88 E-value=7.9e-21 Score=203.24 Aligned_cols=299 Identities=14% Similarity=0.139 Sum_probs=182.7
Q ss_pred CCCchh-HHHHHHHHHHHh----C--C-CcEEEeCCHH-HHHHHHHHHhcc-----CCCEEEE-cCCCCcchHHHHHh--
Q 009167 206 RYGNPT-TVVVEEKMSALE----G--A-ESTVIMASGM-SASTVMLLALVP-----AGGHIVT-TTDCYRKTRIFIET-- 268 (541)
Q Consensus 206 R~~~p~-~~~Le~~LA~l~----g--~-e~~i~~sSGs-~Ai~~al~all~-----pGd~Vlv-~~~~y~~~~~~~~~-- 268 (541)
+|+++. ..+||++||+++ | . .+.|++++|+ +++.+++.+++. +||.|++ ..|+|++.......
T Consensus 69 ~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~ 148 (416)
T PRK09440 69 NYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEED 148 (416)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccC
Confidence 455443 568888888876 3 2 2456666665 899999999885 6899999 79999886542211
Q ss_pred hcccCCeEEEEeC------CCCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCC
Q 009167 269 VLPKMGITATVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 269 ~l~~~Gi~v~~vd------~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~ 339 (541)
.+...+..+..++ ..|+++|+ +.+ +++++++++|+||||.+++ +++|+++|++++++||+||+|....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~-~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~ 225 (416)
T PRK09440 149 LFVSYRPNIELLPEGQFKYHVDFEHLH--IDE-DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPF 225 (416)
T ss_pred ceeecccccccccccccccCCCHHHcc--cCC-CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccC
Confidence 1122222222222 23677776 344 5899999999999999998 5588888999999999999997532
Q ss_pred cc----c--ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH--HHHH--
Q 009167 340 NQ----K--ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT--LHLR-- 409 (541)
Q Consensus 340 ~~----~--~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t--l~~r-- 409 (541)
.. . +...+..|++.|+||+ +.+| ...||+++++++++.+...........+.....++...++. +...
T Consensus 226 ~~~~~~~~~~~~~~~vI~~~SfSK~-~~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~ 303 (416)
T PRK09440 226 PGIIFSEATPLWNPNIILCMSLSKL-GLPG-VRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSE 303 (416)
T ss_pred CCcchhhcCccccCCeEEEeccccc-CCCc-ceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHH
Confidence 21 1 1112345889999996 5444 67899999999999888766555544555555544444432 1111
Q ss_pred ---HHHHHHHHHHHHHHHHhC-CCce-EEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecc
Q 009167 410 ---VQQQNSTALRMAKILEAH-PKVK-RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 484 (541)
Q Consensus 410 ---~~~~~~~a~~la~~L~~~-p~v~-~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS 484 (541)
.+...++...+.+.|+++ +.+. .+..|. .|.++|+.++.......+|.+.+...++.+.
T Consensus 304 ~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~----------------gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~ 367 (416)
T PRK09440 304 TVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPE----------------GAIFLWLWFKDLPITTEELYQRLKARGVLVV 367 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCeEEecCC----------------CceEEEEECCCCCCCHHHHHHHHHHCCEEEe
Confidence 111233445555666654 2221 122221 4678899987411223566666666788888
Q ss_pred cCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009167 485 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 539 (541)
Q Consensus 485 ~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~--e~~edli~dL~~AL~ 539 (541)
.|..+.. .... ......+++|||++. ++.++.++.|.++++
T Consensus 368 pg~~F~~----~~~~----------~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~ 410 (416)
T PRK09440 368 PGHYFFP----GLDE----------DWPHAHQCIRMNYVQDDEEIEKGIAILAEEVE 410 (416)
T ss_pred chHhhCC----CCcc----------ccCCcCceEEEEecCCHHHHHHHHHHHHHHHH
Confidence 7755421 0000 000013689999974 233444555555554
No 183
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.88 E-value=2.1e-20 Score=197.83 Aligned_cols=254 Identities=19% Similarity=0.227 Sum_probs=182.9
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
..|...+||+++|+++|.+.+++++||++|+.+++.++ +++||+||++.++|.++...+ ...|+++.++|.
T Consensus 31 ~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~----~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 31 TGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMI----VLLGATPVMVDVDRDT 106 (379)
T ss_pred CCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHH----HHcCCEEEEEecCCCc
Confidence 46889999999999999999999999999999999999 899999999999999876433 346888888864
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc---ccccCCcEEEECCcc
Q 009167 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---ALSLGADLVLHSATK 357 (541)
Q Consensus 283 --~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~---~~~~gaDivv~S~sK 357 (541)
.|++++++++++ +|++|+ |+|++|.+.|+++|.++|+++|++||+|++++.+.... ....|.+++.++.+|
T Consensus 107 ~~~d~~~l~~~i~~-~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K 182 (379)
T PRK11658 107 LMVTPEAIEAAITP-RTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIK 182 (379)
T ss_pred CCcCHHHHHHhccc-CCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCC
Confidence 278999999987 499987 57789999999999999999999999999987654332 233455665666678
Q ss_pred ccCCCCCceEEEEEeC-hHHHHHHHHHhhh----------------------cC--CCchHHHHHHHHHhHHHHHHHHHH
Q 009167 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV----------------------LG--GALNPNAAYLIIRGMKTLHLRVQQ 412 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~-~~li~~l~~~~~~----------------------~G--~~~s~~~a~l~l~~l~tl~~r~~~ 412 (541)
.+.++ .||+++.+ +++.++++..+.. .| ..++.+.+++.+..++.++...++
T Consensus 183 ~l~~g---~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~ 259 (379)
T PRK11658 183 NITCA---EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNAR 259 (379)
T ss_pred cCccc---CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 77654 37888764 6777777653310 11 124456677777778888888888
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC--HHHHHHHHHHccCcCeecc
Q 009167 413 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD--LTATIKFIDALKIPYIAPS 484 (541)
Q Consensus 413 ~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~--~~~~~~~l~~L~~~~iavS 484 (541)
..++++.+.+.|++.+.. .+..|..... ....++.|.++.. .....++++.|+..+|.+.
T Consensus 260 r~~~a~~~~~~L~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~ 321 (379)
T PRK11658 260 RREIAARYLQALADLPFQ-PLSLPAWPHQ-----------HAWHLFIIRVDEERCGISRDALMEALKERGIGTG 321 (379)
T ss_pred HHHHHHHHHHHhcCCCCc-cCcCCCCCCc-----------eeEEEEEEEECCccccCCHHHHHHHHHHCCCCCc
Confidence 888888888888776532 2222221100 0113455555421 1234567777776666543
No 184
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.88 E-value=2.7e-20 Score=198.18 Aligned_cols=285 Identities=18% Similarity=0.203 Sum_probs=193.4
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc---------CC-CEEEEcCCCCcchHHHHHhh-------
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRKTRIFIETV------- 269 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~---------pG-d~Vlv~~~~y~~~~~~~~~~------- 269 (541)
+.++...+|+++|+++.|.+.+++++||++|+..+++.+.. +| ++|++....|++........
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~ 159 (401)
T PRK00854 80 FRNDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDAR 159 (401)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcccc
Confidence 45678899999999999988999999999999999987742 23 67888888877743222110
Q ss_pred --cccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCccc-
Q 009167 270 --LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQK- 342 (541)
Q Consensus 270 --l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~~~- 342 (541)
+......+..++..|+++|++++.+ ++++|++|+|+||+|.+.| +++|.++|++||+++|+||++.. +...
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~le~~i~~-~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g-~g~~g 237 (401)
T PRK00854 160 GGFGPFTPGFRVVPFGDAEALEAAITP-NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTG-LGRTG 237 (401)
T ss_pred ccCCCCCCCeEEeCCCCHHHHHHHhCC-CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC-CCCCc
Confidence 1222345667788899999999987 5999999999999999997 99999999999999999999862 2111
Q ss_pred ------ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHH--HHHHHH
Q 009167 343 ------ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQN 414 (541)
Q Consensus 343 ------~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~--r~~~~~ 414 (541)
......|+++. +|+++++. ..+|++++++++++.++..........++..+++++..|+.+.. ..++..
T Consensus 238 ~~~~~~~~g~~~D~~~~--~K~l~gg~-~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~ 314 (401)
T PRK00854 238 KLLAEEHEGIEADVTLI--GKALSGGF-YPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAA 314 (401)
T ss_pred hHhHHhhcCCCCCEEEe--cccccCCc-cCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 12234688875 59998653 34788999998888775322211122367777777777776653 344445
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCccccccc
Q 009167 415 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQ 494 (541)
Q Consensus 415 ~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~ 494 (541)
++.+.+.+.|++.... .+ ...++.|.++.|.+.++......|.+.|...++.+..
T Consensus 315 ~~~~~l~~~L~~~~~~-~~---------------~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~--------- 369 (401)
T PRK00854 315 EMGAYFLEGLRSIRSN-IV---------------REVRGRGLMLAVELEPEAGGARQYCEALKERGLLAKD--------- 369 (401)
T ss_pred HHHHHHHHHHHhhccC-ce---------------EEEeccceEEEEEEecCchhHHHHHHHHHHCCeEEec---------
Confidence 5566666666654210 00 1123467888888854333456777777665654421
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 495 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
...+.||++..+..+++.++.+.++|+
T Consensus 370 ------------------~~~~~lR~~p~~~~t~e~i~~~i~~l~ 396 (401)
T PRK00854 370 ------------------THDHTIRLAPPLVITREQVDWALEQIA 396 (401)
T ss_pred ------------------CCCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 013689999866544444444444443
No 185
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.88 E-value=4.5e-20 Score=194.98 Aligned_cols=307 Identities=15% Similarity=0.125 Sum_probs=203.6
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC----
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
.+..+++++.++++.|.+.+++++||++|+.+++.++ ++|||+||++.++|.++...+ ...|.+++++|.+
T Consensus 30 g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~----~~~G~~~v~vd~d~~~~ 105 (376)
T TIGR02379 30 GPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF----VLRGAKIVFVDIRPDTM 105 (376)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcC
Confidence 5778999999999999999999999999999999887 899999999999999876443 3458888888643
Q ss_pred --CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc--cccccCCcEEEECCc--c
Q 009167 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KALSLGADLVLHSAT--K 357 (541)
Q Consensus 284 --d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~--~~~~~gaDivv~S~s--K 357 (541)
|++++++++++ ++++|+ |+||+|...|+++|.++|+++|++||+|++++.+... .+...-.|+.++|++ |
T Consensus 106 ~~d~~~le~~i~~-~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K 181 (376)
T TIGR02379 106 NIDETLIESAITH-RTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETK 181 (376)
T ss_pred CCCHHHHHHhcCc-CceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCCCCC
Confidence 68899999987 599986 5788999999999999999999999999998765322 233222478888875 4
Q ss_pred ccCCCCCceEEEEEe-ChHHHHHHHHHhhh-------------------cC--CCchHHHHHHHHHhHHHHHHHHHHHHH
Q 009167 358 FIGGHNDVLAGSISG-SGKLVTQIRNLHHV-------------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNS 415 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~-~~~li~~l~~~~~~-------------------~G--~~~s~~~a~l~l~~l~tl~~r~~~~~~ 415 (541)
.+..++ .||+++. ++++.++++..+.. .| ..++...+.+.+..|+.++...++..+
T Consensus 182 ~l~~g~--~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~ 259 (376)
T TIGR02379 182 NYTSGG--EGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLA 259 (376)
T ss_pred cCcccC--CceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHH
Confidence 454322 2576655 57888887765431 11 123456677777788889888888888
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccC
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
+++.+.+.|...+....+..|..+....+ .-.++.+.++.. ....++++.|+..||.+..+- ..+..+|
T Consensus 260 ~~~~y~~~L~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~~~-~~r~~l~~~L~~~gI~~~~~~-~p~~~~~ 328 (376)
T TIGR02379 260 TWQLYQDALKPLEEKGIIELPSIPNGCQH---------NAHMFYIKLKDE-DDRNELIKYLKEQEIMAVFHY-VPLHSSP 328 (376)
T ss_pred HHHHHHHHhccCCcCCeeeCCCCCCCCee---------eeEEEEEEECCc-CCHHHHHHHHHHCCCCccccC-cCCCcch
Confidence 88888888876542111223332211110 113556777532 234677777877777665432 1222223
Q ss_pred ccccc----cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 496 AIMSY----WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 496 a~~~~----~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
....+ ...+..++ +....|.|=+...-.++.++.+.+++.+
T Consensus 329 ~~~~~~~~~~~~p~~~~----~~~~~l~LP~~~~l~~~~~~~i~~~i~~ 373 (376)
T TIGR02379 329 AGRYFGRFHGEDIYTTK----ESERLVRLPLYYGLSKEDQARVIQTICD 373 (376)
T ss_pred hHHhhCCCCCCChHHHH----HHhceEEccCCCCCCHHHHHHHHHHHHH
Confidence 11011 11222211 2245566655554445555666666543
No 186
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.88 E-value=3.9e-20 Score=194.26 Aligned_cols=258 Identities=17% Similarity=0.154 Sum_probs=172.3
Q ss_pred hhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC---
Q 009167 210 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e----~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
...+++++.+++++|++ .+++++||+++++.++.+++.+||++++..+.+.+.. +...++..|++++.++.
T Consensus 35 ~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~a~~~g~~~~~v~~~~~ 112 (363)
T TIGR02326 35 IVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGAR--IVQIAEYLGIPHHVVDTGEV 112 (363)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCC
Confidence 35778899999999984 2556678889999999999989888766555554432 22445667888777654
Q ss_pred --CCHHHHHHhccCC-CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCccc
Q 009167 283 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (541)
Q Consensus 283 --~d~e~Le~al~~~-~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~sK~ 358 (541)
.|+++++++++.+ ++++|.+.++.||||.++|+++|.++||++|+++|+|++++.+. +.+...+++|+++.|++|+
T Consensus 113 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~ 192 (363)
T TIGR02326 113 EPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKC 192 (363)
T ss_pred CCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCccc
Confidence 3789999998743 36788888999999999999999999999999999999876543 3445567899999999999
Q ss_pred cCCCCCceEEEEEeChHHHHHHHHHhh---------------hcC---CCchHHHHHHHHHhHHH------HHHHHHHHH
Q 009167 359 IGGHNDVLAGSISGSGKLVTQIRNLHH---------------VLG---GALNPNAAYLIIRGMKT------LHLRVQQQN 414 (541)
Q Consensus 359 lgg~gd~~gG~lv~~~~li~~l~~~~~---------------~~G---~~~s~~~a~l~l~~l~t------l~~r~~~~~ 414 (541)
++|+.+ .|+++.+++.++++..... ..| .+.+......+..+++. ++.+.++..
T Consensus 193 l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~ 270 (363)
T TIGR02326 193 IQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQ 270 (363)
T ss_pred cccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 865532 5899998887765432100 001 12222222222223322 233455666
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHHHHccCcCeecccC
Q 009167 415 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 415 ~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~~~~iavS~G 486 (541)
+.+.++.+.|+++. +..+..+.. ..+.+++|.++.. ......+.+.|+..++.++.|
T Consensus 271 ~~~~~l~~~L~~~g-~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g 328 (363)
T TIGR02326 271 QNQKTLVAGMRALG-FEPLLDDEI--------------QSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPG 328 (363)
T ss_pred HHHHHHHHHHHHcC-CeeccCccc--------------CCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECC
Confidence 77778888887752 222111110 1234577887642 123456667776667777655
No 187
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.88 E-value=8.7e-21 Score=185.44 Aligned_cols=312 Identities=18% Similarity=0.226 Sum_probs=224.5
Q ss_pred cccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc-CCCEEEEcC
Q 009167 178 VNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTTT 256 (541)
Q Consensus 178 ~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~-pGd~Vlv~~ 256 (541)
.+|.|++.|+.++...+.+..-+.-.|+ .+|+..+||+.+|+++|.|..+|++||+.++.++++..+. +|.+||+.+
T Consensus 26 LRSDTvT~PTdeMr~am~eA~vgDdVyG--eD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd 103 (384)
T KOG1368|consen 26 LRSDTVTVPTDEMRRAMAEASVGDDVYG--EDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGD 103 (384)
T ss_pred cccccccCChHHHHHHHhhcccCccccc--CCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEEecc
Confidence 6788888888777666666656667788 4789999999999999999999999999999999988765 899999999
Q ss_pred CCCcchHHHHHhhcccCCeEEEEeCC-----CCHHHHHHhccCC-------CceEEEEeCCCCCCC-ccccHH---HHHH
Q 009167 257 DCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN-------NVSLFFTESPTNPFL-RCVDVK---LVSD 320 (541)
Q Consensus 257 ~~y~~~~~~~~~~l~~~Gi~v~~vd~-----~d~e~Le~al~~~-------~tklV~lesP~NPtG-~i~dl~---~Ia~ 320 (541)
..|--.+..- .+....|+.++.+.. .++++|++++... .|++|.+|+-+|.+| .++|++ +|.+
T Consensus 104 ~~HI~~~E~g-g~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~ 182 (384)
T KOG1368|consen 104 RAHIHRYEQG-GISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKA 182 (384)
T ss_pred chheeehhcc-ChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHH
Confidence 8875433221 111223566655532 2799999999732 489999999998776 999977 6778
Q ss_pred HHHhCCCEEEEeCC--C----CCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchH-
Q 009167 321 LCHKKGAIVCIDGT--F----ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP- 393 (541)
Q Consensus 321 la~~~gi~lIvDea--~----a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~- 393 (541)
+|+++|+.|++|.+ | +.+++.+-.-.-+|-|-..+||.+|.+ +|.+++|+++++++.+.++..+|+.+-.
T Consensus 183 lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQs 259 (384)
T KOG1368|consen 183 LAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQS 259 (384)
T ss_pred HHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHH
Confidence 89999999999998 2 234444444445787888899999977 4778999999999999888888876543
Q ss_pred -HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHH
Q 009167 394 -NAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 472 (541)
Q Consensus 394 -~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~ 472 (541)
..+.+++-.+..-...+++-.+.+..++++++..+.+ ++..|.. ..+|+.+.+....-.++.+
T Consensus 260 GvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i-~v~v~a~---------------etNiv~~~l~q~~~~~~~l 323 (384)
T KOG1368|consen 260 GVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEI-RVEVPAV---------------ETNIVNMVLCQARLTAEEL 323 (384)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhccccce-eeecchh---------------hcceeeeecccccCCHHHH
Confidence 3444445555543335556667889999999866555 3555543 2467777776544556777
Q ss_pred HHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 473 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 473 l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
.+.++..++.+-.| ....+|+.+...-+++.++.+..++
T Consensus 324 ~~~~~k~gi~lm~~---------------------------~s~r~Rivlh~Qvt~~~ve~~~~~~ 362 (384)
T KOG1368|consen 324 CKFLEKNGILLMGG---------------------------ASRRIRIVLHHQVTDEDVEYVKSVL 362 (384)
T ss_pred HHHHHHCCeEEeec---------------------------cccceEEEEEEecCHHHHHHHHHHH
Confidence 77776655433221 1234899888765555556665555
No 188
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.88 E-value=3.2e-20 Score=197.86 Aligned_cols=276 Identities=14% Similarity=0.129 Sum_probs=167.8
Q ss_pred CchhHHHHHHHHHHHh---CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe-------
Q 009167 208 GNPTTVVVEEKMSALE---GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI------- 275 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~---g~-e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi------- 275 (541)
+.+....|++++|+++ +. .+.|++++|+ +++..+ ..++.+||+|++++|+|......+ +..|+
T Consensus 73 p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~~~~ 147 (402)
T TIGR03542 73 PEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL-QSLFGSDNTVAVQDPVYPAYVDSN----VMAGRAGVLDDD 147 (402)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHH----HHcCCccccccc
Confidence 4456778999999975 33 2456666665 888775 566789999999999998865433 34455
Q ss_pred ----EEEEeCCCCHHHHHHhc-cCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc----c
Q 009167 276 ----TATVIDPADMEGLEAAL-NNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A 343 (541)
Q Consensus 276 ----~v~~vd~~d~e~Le~al-~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~----~ 343 (541)
++..++.++.+.+...+ ...++++|++++|+||||.+++ +++|+++|+++|++||+||+|....... +
T Consensus 148 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~ 227 (402)
T TIGR03542 148 GRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHS 227 (402)
T ss_pred cccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcc
Confidence 66666542111111111 1125899999999999999998 6788899999999999999987543211 1
Q ss_pred c---cc--CCcEEEECCccccCCCCCceEEEEEeChHHH--------HHHHHHhhhcCCCchHHHHHHHHHhH-----HH
Q 009167 344 L---SL--GADLVLHSATKFIGGHNDVLAGSISGSGKLV--------TQIRNLHHVLGGALNPNAAYLIIRGM-----KT 405 (541)
Q Consensus 344 ~---~~--gaDivv~S~sK~lgg~gd~~gG~lv~~~~li--------~~l~~~~~~~G~~~s~~~a~l~l~~l-----~t 405 (541)
. .. ...+++.|+||.+|.+| +..|+++++++++ ..+...........+.....++...+ +.
T Consensus 228 ~~~~~~~~~~vi~~~SfSK~~g~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 306 (402)
T TIGR03542 228 IFEIPGAKECAIEFRSFSKTAGFTG-VRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQP 306 (402)
T ss_pred hhhCCCCcccEEEEecCccccCCCC-cceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhH
Confidence 1 11 23477899999998666 4679999988876 22211111112223433333322222 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecc
Q 009167 406 LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPS 484 (541)
Q Consensus 406 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS 484 (541)
+....+...++++.+.+.|+++. + .+ +++ ..|+++|++++.. ....++.+.+. ..++.+.
T Consensus 307 ~~~~~~~~~~~~~~~~~~L~~~~-~-~~-~~~---------------~~~~f~~v~l~~~-~~~~~l~~~l~~~~gv~v~ 367 (402)
T TIGR03542 307 ILEAISYYMENARILRKALEAAG-F-KV-YGG---------------EHAPYLWVKTPEG-ISSWDFFDFLLYQYHVVGT 367 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-c-ee-cCC---------------CceeEEEEECCCC-CCHHHHHHHHHHhCCEEEe
Confidence 22233344566667778887652 2 11 111 1466899999752 12334555543 4467666
Q ss_pred cCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009167 485 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 530 (541)
Q Consensus 485 ~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edl 530 (541)
.|..+.. ..++++||+++. +.+++
T Consensus 368 pg~~f~~---------------------~~~~~iRis~~~-~~~~l 391 (402)
T TIGR03542 368 PGSGFGP---------------------SGEGFVRFSAFG-KRENI 391 (402)
T ss_pred CchhhCC---------------------CCCCEEEEEecC-CHHHH
Confidence 6644311 024799999865 44443
No 189
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.88 E-value=3e-20 Score=198.54 Aligned_cols=256 Identities=12% Similarity=0.090 Sum_probs=156.1
Q ss_pred CchhHHHHHHHHHHHh------CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE---
Q 009167 208 GNPTTVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--- 276 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~------g~-e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~--- 276 (541)
+.+...+||++||+++ +. .+.|++++|+ +++.++ ..++.+||+|++++|+|......+ +..|.+
T Consensus 74 ~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~~~----~~~g~~~~~ 148 (409)
T PRK07590 74 PEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVDTN----VMAGRTGEA 148 (409)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHH----HHcCCcccc
Confidence 4456678999999875 22 3456666665 888875 456789999999999999866443 333443
Q ss_pred --------EEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccH---HHHHHHHHhCCCEEEEeCCCCCCCcc----
Q 009167 277 --------ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 277 --------v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl---~~Ia~la~~~gi~lIvDea~a~~~~~---- 341 (541)
+..++.+.-+.+...+...++|+|++++|+||||.+++. ++|+++|++||++||+||+|......
T Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~ 228 (409)
T PRK07590 149 NEDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLP 228 (409)
T ss_pred cccccccceeEeecccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCC
Confidence 555543211112211222358999999999999999984 47788899999999999998753221
Q ss_pred ccc---cc--CCcEEEECCccccCCCCCceEEEEEeChHHHHHH------------HHHhhhcCCCchHHHHHHHHHhH-
Q 009167 342 KAL---SL--GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI------------RNLHHVLGGALNPNAAYLIIRGM- 403 (541)
Q Consensus 342 ~~~---~~--gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l------------~~~~~~~G~~~s~~~a~l~l~~l- 403 (541)
.++ +. ...|++.|+||.++.+| +..|++++++++++.+ ..........++...+.++...+
T Consensus 229 ~~~~~~~~~~~~vi~~~SfSK~~~~pG-lRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~ 307 (409)
T PRK07590 229 HSIYEIEGARECAIEFRSFSKTAGFTG-TRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYS 307 (409)
T ss_pred cchhhCCCcccceEEEecCccccCCcC-ceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhc
Confidence 111 11 13477899999997555 4689999998888632 11111111123333333332222
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cC
Q 009167 404 ----KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KI 478 (541)
Q Consensus 404 ----~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~ 478 (541)
+.+....+...+++..+.+.|+++. +. +..| ..|.++|+.++.. ....+|...+ +.
T Consensus 308 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~-~~~~----------------~g~~f~wi~~~~~-~~~~~~~~~l~~~ 368 (409)
T PRK07590 308 PEGKAQIKELIDYYMENAKIIREGLESAG-FE-VYGG----------------VNAPYIWVKTPDG-MSSWDFFDKLLQE 368 (409)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc-eecC----------------CcceEEEEECCCC-CCHHHHHHHHHHH
Confidence 2233334445566777888888752 21 2111 1466889999753 1234455444 34
Q ss_pred cCeecccCCc
Q 009167 479 PYIAPSFGGC 488 (541)
Q Consensus 479 ~~iavS~G~~ 488 (541)
.++.+..|..
T Consensus 369 ~gv~v~pg~~ 378 (409)
T PRK07590 369 ANVVGTPGSG 378 (409)
T ss_pred CCEEEeChhH
Confidence 4666666644
No 190
>PRK06855 aminotransferase; Validated
Probab=99.88 E-value=5.5e-20 Score=197.98 Aligned_cols=214 Identities=15% Similarity=0.156 Sum_probs=136.2
Q ss_pred hhHHHHHHHHHHHh----CC---CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 210 PTTVVVEEKMSALE----GA---ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g~---e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
....+||+.||+++ |. .+.|++++| ++|+.+++. ++.+||.|++++|+|++... .. ....|+++..++
T Consensus 73 ~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~-~~--~~~~g~~~v~v~ 148 (433)
T PRK06855 73 KGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSS-AE--AAHAGYPPVTYR 148 (433)
T ss_pred CCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHH-HH--HHhcCCeEEEEe
Confidence 44567888888876 32 233545555 589988875 78999999999999987432 11 112355444432
Q ss_pred C-------CCHHHHHHhccC-CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc----c-cc
Q 009167 282 P-------ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A-LS 345 (541)
Q Consensus 282 ~-------~d~e~Le~al~~-~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~----~-~~ 345 (541)
. .|+++|+++++. .+++++++++|+||||.+++ +++|+++|+++|++||+||+|....... + ..
T Consensus 149 ~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~ 228 (433)
T PRK06855 149 LDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSE 228 (433)
T ss_pred cccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHH
Confidence 1 378999999863 24799999999999999998 4577888999999999999987543211 1 11
Q ss_pred ---cCCcEEEECCccccCCCCCceEEEEEeC-----hH---HHHHHHHHhhhcCCCchHHHHHHHHHhHH------HHHH
Q 009167 346 ---LGADLVLHSATKFIGGHNDVLAGSISGS-----GK---LVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHL 408 (541)
Q Consensus 346 ---~gaDivv~S~sK~lgg~gd~~gG~lv~~-----~~---li~~l~~~~~~~G~~~s~~~a~l~l~~l~------tl~~ 408 (541)
.+..|++.|+||.++.+| .+.||++++ +. +++.+...... ....+...+.++.+.++ .+..
T Consensus 229 ~~~~~~~I~~~S~SK~~~~pG-lRiG~ii~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Q~a~~~~l~~~~~~~~~~~ 306 (433)
T PRK06855 229 VIGDVPGIALKGISKELPWPG-SRCGWIEVYNADKDEVFKKYINSILNAKMI-EVCSTTLPQMAIPRIMSHPEYKNYLKE 306 (433)
T ss_pred HcCcCCeEEEecCccccCCCc-ceEEEEEEeCCchhhHHHHHHHHHHHhhcc-ccCCChHHHHHHHHhhcCCcHHHHHHH
Confidence 123489999999997555 468898862 22 22333222221 12233444444444442 2233
Q ss_pred HHHHHHHHHHHHHHHHHhCCC
Q 009167 409 RVQQQNSTALRMAKILEAHPK 429 (541)
Q Consensus 409 r~~~~~~~a~~la~~L~~~p~ 429 (541)
..+...++++.+.+.|++.+.
T Consensus 307 ~~~~~~~r~~~~~~~L~~~~~ 327 (433)
T PRK06855 307 RNKRYEKRSNIAYEKLKDVPG 327 (433)
T ss_pred HHHHHHHHHHHHHHHHhcCCC
Confidence 333444566667778876544
No 191
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.88 E-value=3.1e-20 Score=200.40 Aligned_cols=284 Identities=14% Similarity=0.155 Sum_probs=181.9
Q ss_pred hHHHHHHHHHHHhC--------C-CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 211 TTVVVEEKMSALEG--------A-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 211 ~~~~Le~~LA~l~g--------~-e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
....||++||++++ . .+.|++++| ++|+.+++.+++.|||.|+++.|.|++....+. .+.|+++..+
T Consensus 96 G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~---~~~g~~vv~v 172 (447)
T PLN02607 96 GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WRTGVKIVPI 172 (447)
T ss_pred chHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH---hcCCcEEEEE
Confidence 45678888888764 1 234555665 589999999999999999999999988653332 1356776666
Q ss_pred CC-------CCHHHHHHhccC-----CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----
Q 009167 281 DP-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 281 d~-------~d~e~Le~al~~-----~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~---- 341 (541)
+. .|++++++++++ .++|+|++++|+||||.+++ +++|.++|+++|+++|+||+|+.....
T Consensus 173 ~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f 252 (447)
T PLN02607 173 HCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEF 252 (447)
T ss_pred eCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc
Confidence 43 368888888753 25899999999999999998 668888999999999999998753211
Q ss_pred -ccc----c------cCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----
Q 009167 342 -KAL----S------LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---- 405 (541)
Q Consensus 342 -~~~----~------~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---- 405 (541)
... . ....+++.|+||.||..| .+.|++++ ++++++.++.... ++. ++.....++...++.
T Consensus 253 ~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~G-lRvG~ivs~n~~l~~~~~~~~~-~~~-~s~~~q~~~~~~L~d~~~~ 329 (447)
T PLN02607 253 VSVAEIVEARGYKGVAERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSS-FTL-VSSQTQHLLASMLSDEEFT 329 (447)
T ss_pred ccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCc-ceEEEEEEcCHHHHHHHHHHhh-cCC-CCHHHHHHHHHHhCCchhH
Confidence 111 0 123478899999998666 56788887 5667666655432 222 233333333333321
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-----HHHHHHHHHHc-
Q 009167 406 ---LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LTATIKFIDAL- 476 (541)
Q Consensus 406 ---l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-----~~~~~~~l~~L- 476 (541)
+....++..+..+.+.+.|+++ ++. + .+ ...|.++|+.++.. .+...++.+.+
T Consensus 330 ~~~l~~~r~~l~~~~~~~~~~L~~~-gi~-~-~~---------------~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll 391 (447)
T PLN02607 330 ENYIRTNRERLRKRYEMIVQGLRRA-GIE-C-LK---------------GNAGLFCWMNLSPLLETPTREGELALWDSIL 391 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCC-c-cc---------------CCeeEEEEEEchHhhcCCCchhHHHHHHHHH
Confidence 2222334445666777788765 221 1 11 11467889998631 12223455444
Q ss_pred cCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHHh
Q 009167 477 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQALH 539 (541)
Q Consensus 477 ~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~---edli~dL~~AL~ 539 (541)
+..++.+..|..+.. ..++++||+++..+. ++-+++|.++|+
T Consensus 392 ~~~gV~v~pG~~f~~---------------------~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~ 436 (447)
T PLN02607 392 REVKLNISPGSSCHC---------------------SEPGWFRVCFANMSEDTLEVALKRIHRFMD 436 (447)
T ss_pred HhCCEEEcCccccCC---------------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 345777777754310 135899999996444 344555555554
No 192
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.88 E-value=6.5e-20 Score=196.03 Aligned_cols=280 Identities=15% Similarity=0.138 Sum_probs=201.2
Q ss_pred hhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc--------------cCCCEEEEcCCCCcchHHHHHhhcccC-C
Q 009167 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------------PAGGHIVTTTDCYRKTRIFIETVLPKM-G 274 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all--------------~pGd~Vlv~~~~y~~~~~~~~~~l~~~-G 274 (541)
..+++||++||+++|.+++++++||..|+..++.++. ..+|.|++....|.+....++ +.+.. +
T Consensus 147 ~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~-ls~~~~~ 225 (476)
T PLN02955 147 TYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR-LAERQGN 225 (476)
T ss_pred HHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHH-hccccCC
Confidence 4678899999999999999999999999999988772 456789998889988766553 23323 5
Q ss_pred eEEEEeCCCCHHHHHHhccCC--CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc-------c--
Q 009167 275 ITATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-------A-- 343 (541)
Q Consensus 275 i~v~~vd~~d~e~Le~al~~~--~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~-------~-- 343 (541)
.++..++.+|+++|++.++.. +.++|++|...++.|.+.|+++|.++|++||++||+||+++.+.... .
T Consensus 226 a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g 305 (476)
T PLN02955 226 VEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFN 305 (476)
T ss_pred ceEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhC
Confidence 778888999999999888532 35789999999999999999999999999999999999987654321 1
Q ss_pred cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHHHH---HHHHHHHHHHHH
Q 009167 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTAL 418 (541)
Q Consensus 344 ~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~tl---~~r~~~~~~~a~ 418 (541)
.....|+++.|++|.+|.. ||++++++++++.++.... .+++.+++..+..++..++.+ ..+.++..++.+
T Consensus 306 ~~~di~ii~~TLsKA~G~~----GGfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~ 381 (476)
T PLN02955 306 CEADVDLCVGTLSKAAGCH----GGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVK 381 (476)
T ss_pred CCCCCcEEEEeCccchhcc----CceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 1225689999999999865 5999999988888875433 345555555554445555443 234444445554
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
++.+.+ ++.. ...++.+.+. +...+..+.+.|...|+-++. +..|+..
T Consensus 382 ~fr~~~------------G~~~-------------~sPI~pI~ig-~~~~a~~~~~~L~~~Gi~v~~------i~yPtVP 429 (476)
T PLN02955 382 EFKALS------------GVDI-------------SSPIISLVVG-NQEKALKASRYLLKSGFHVMA------IRPPTVP 429 (476)
T ss_pred HHHHhc------------CCCC-------------CCCEEEEEeC-CHHHHHHHHHHHHHCCCEEEE------ECCCCCC
Confidence 444311 1110 1458888884 556677778888766765543 2334321
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.....+||++...++++.|+.|.++|.+
T Consensus 430 --------------~g~~rLRi~lsA~Ht~edId~lv~~L~~ 457 (476)
T PLN02955 430 --------------PNSCRLRVTLSAAHTTEDVKKLITALSS 457 (476)
T ss_pred --------------CCCceEEEeeCCCCCHHHHHHHHHHHHH
Confidence 1245799999998888888888877764
No 193
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.87 E-value=4.9e-20 Score=197.22 Aligned_cols=221 Identities=19% Similarity=0.223 Sum_probs=152.5
Q ss_pred CCCccCCC--CchhHHHHHH----HHHHHhCCCcEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhccc
Q 009167 200 ASFEYGRY--GNPTTVVVEE----KMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 200 ~~~~Y~R~--~~p~~~~Le~----~LA~l~g~e~~i~-~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~ 272 (541)
.++.++|+ ++|.+++||+ ++++++|.+.+++ ++||+.|+.+++.+++++||+|++++..|++....- .....
T Consensus 58 ~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g-~~~~~ 136 (416)
T PRK13034 58 EGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHG-AKVSL 136 (416)
T ss_pred CCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecC-Cccee
Confidence 35667777 6899999999 9999999998865 589999999999999999999999999998732100 00000
Q ss_pred CC--eEEEEeCC------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc----
Q 009167 273 MG--ITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (541)
Q Consensus 273 ~G--i~v~~vd~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~---- 340 (541)
.+ .+...++. .|++++++.++..++++|+++.+. +|...|+++|.++|+++|+++|+|++++.+..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~ 214 (416)
T PRK13034 137 SGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELDFARFREIADEVGALLMVDMAHIAGLVAAGE 214 (416)
T ss_pred ccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccCHHHHHHHHHHcCCEEEEeCcccccCcccCC
Confidence 11 11122332 588999988854458999886654 57888999999999999999999999655432
Q ss_pred -ccccccCCcEEEECCccccCCCCCceEEEEEeChH-HHHHHHHHhhh--cCCCchHHHHHHHHHhHHHH----HHHHHH
Q 009167 341 -QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL----HLRVQQ 412 (541)
Q Consensus 341 -~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~-li~~l~~~~~~--~G~~~s~~~a~l~l~~l~tl----~~r~~~ 412 (541)
..++. ++|++++|++|+++|+. ||+++++++ +.++++..... .+....+..+.++...++.+ ..+.++
T Consensus 215 ~~~~~~-~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~ 290 (416)
T PRK13034 215 HPNPFP-HAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQ 290 (416)
T ss_pred CCCCCC-CceEEEEeCcccCCCCC---CeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHH
Confidence 22333 58999999999997664 687777654 44444443211 11222333333332222222 234567
Q ss_pred HHHHHHHHHHHHHhC
Q 009167 413 QNSTALRMAKILEAH 427 (541)
Q Consensus 413 ~~~~a~~la~~L~~~ 427 (541)
..++++++++.|++.
T Consensus 291 l~~~a~~l~~~L~~~ 305 (416)
T PRK13034 291 VIANAQALAEVLKER 305 (416)
T ss_pred HHHHHHHHHHHHHHc
Confidence 778899999988775
No 194
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.87 E-value=5.9e-20 Score=193.14 Aligned_cols=258 Identities=17% Similarity=0.175 Sum_probs=174.3
Q ss_pred hhHHHHHHHHHHHhCCC---c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC---
Q 009167 210 PTTVVVEEKMSALEGAE---S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e---~-~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
...+++++.+++++|.+ . .++++||++++..++.++..+||+|++..+.|.+.. +...++..|+++..++.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~~~~~g~~~~~i~~~~~ 114 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGAR--IAQIAEYLGIAHVVLDTGED 114 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHH--HHHHHHHcCCcEEEEECCCC
Confidence 36789999999999984 3 446678899999999999999999999888776643 23455667888877753
Q ss_pred --CCHHHHHHhccCC-CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCccc
Q 009167 283 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (541)
Q Consensus 283 --~d~e~Le~al~~~-~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~sK~ 358 (541)
.|+++++++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|+++..+. +.+...+++|+++.|++|+
T Consensus 115 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~ 194 (368)
T PRK13479 115 EPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKC 194 (368)
T ss_pred CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccc
Confidence 3689999988642 46789999999999999999999999999999999998765432 3344456899999999998
Q ss_pred cCCCCCceEEEEEeChHHHHHHHHHhhhc--------------C---CCchHHHHHHHHHhHHH------HHHHHHHHHH
Q 009167 359 IGGHNDVLAGSISGSGKLVTQIRNLHHVL--------------G---GALNPNAAYLIIRGMKT------LHLRVQQQNS 415 (541)
Q Consensus 359 lgg~gd~~gG~lv~~~~li~~l~~~~~~~--------------G---~~~s~~~a~l~l~~l~t------l~~r~~~~~~ 415 (541)
+.|+.+ .|+++.++++++.+......+ + .+.+....+.+..+++. +..+.++..+
T Consensus 195 l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~ 272 (368)
T PRK13479 195 IEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYAN 272 (368)
T ss_pred cccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 754432 499999998887765421100 1 12222222222222222 2344556667
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-HHHHHHHHHccCcCeecccC
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-~~~~~~l~~L~~~~iavS~G 486 (541)
.++.+.+.|++++ +. +..+. .+ ..+.++.|.++... ....++.+.|...++.++.|
T Consensus 273 ~~~~l~~~L~~~g-~~-~~~~~-----~~--------~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g 329 (368)
T PRK13479 273 NQRTLVAGMRALG-FE-PLLDA-----EI--------QSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPG 329 (368)
T ss_pred HHHHHHHHHHHcC-Cc-ccCCc-----hh--------cCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecC
Confidence 7777888887753 21 11111 00 02345666665321 23456777777667777544
No 195
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.87 E-value=1.1e-19 Score=189.31 Aligned_cols=288 Identities=17% Similarity=0.161 Sum_probs=191.3
Q ss_pred hhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC---
Q 009167 210 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e----~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
+..+++++.+++++|.+ ..+++++|++++..++.+++.+||++++..+.+.+.. +...++..|.++..++.
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~~~ 108 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFSEY 108 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhH--HHHHHHHcCCceEEEecCCC
Confidence 67889999999999984 2446788999999999999988888766655544421 22344556777776653
Q ss_pred --CCHHHHHHhccCC-CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCccc
Q 009167 283 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (541)
Q Consensus 283 --~d~e~Le~al~~~-~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~sK~ 358 (541)
.|+++++++++++ ++++|++.+++|++|.+.|+++|.++|+++|+++|+|++++.+. ..+...+++|+++.|++|+
T Consensus 109 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~ 188 (355)
T TIGR03301 109 EPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKC 188 (355)
T ss_pred CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcc
Confidence 2789999988642 46788888999999999999999999999999999999866442 3344456899999999999
Q ss_pred cCCCCCceEEEEEeChHHHHHHHHHhh-----------------hcCCCchHHHHHHHHHhHHH------HHHHHHHHHH
Q 009167 359 IGGHNDVLAGSISGSGKLVTQIRNLHH-----------------VLGGALNPNAAYLIIRGMKT------LHLRVQQQNS 415 (541)
Q Consensus 359 lgg~gd~~gG~lv~~~~li~~l~~~~~-----------------~~G~~~s~~~a~l~l~~l~t------l~~r~~~~~~ 415 (541)
++|+.+ .|++++++++++.++.... ....+.+....+.+...++. +..+.++..+
T Consensus 189 l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~ 266 (355)
T TIGR03301 189 LEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRR 266 (355)
T ss_pred cccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 865432 4899999988877652100 01112333333332333332 3344556667
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHHHHccCcCeecccCCccccccc
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQ 494 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~~~~iavS~G~~~sl~~~ 494 (541)
+++.+.+.|+++ .++ +..|. . ...+.+++|.++.. .....++.+.|...++.++.|+..
T Consensus 267 ~~~~~~~~L~~~-g~~-~~~~~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~----- 326 (355)
T TIGR03301 267 NRELLVDGLRAL-GFQ-PLLPE--R-----------WQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLT----- 326 (355)
T ss_pred HHHHHHHHHHHc-CCe-eecCC--C-----------CCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccc-----
Confidence 778888888765 332 22221 0 01244678888642 123456777776667666554210
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 495 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+.|||++...+.++.++.+.++|++
T Consensus 327 -------------------~~~~iRis~~~~~~~~~i~~~~~~l~~ 353 (355)
T TIGR03301 327 -------------------LADTFRIGTIGEIDAADIERLLEAIKD 353 (355)
T ss_pred -------------------cccEEEEecCCCCCHHHHHHHHHHHHh
Confidence 125899998655556666777766654
No 196
>PRK08354 putative aminotransferase; Provisional
Probab=99.87 E-value=4.1e-20 Score=190.36 Aligned_cols=159 Identities=19% Similarity=0.247 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHhCCCcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHH
Q 009167 212 TVVVEEKMSALEGAESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEA 290 (541)
Q Consensus 212 ~~~Le~~LA~l~g~e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~ 290 (541)
...|++++|+++|. + |++++| ++++..++. ++.+||+|++++|+|..... .++..|.++..++ .|++.+++
T Consensus 42 ~~~l~~~ia~~~~~-~-I~vt~G~~~al~~~~~-~~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~~~-~d~~~l~~ 113 (311)
T PRK08354 42 YEWLEEEFSKLFGE-P-IVITAGITEALYLIGI-LALRDRKVIIPRHTYGEYER----VARFFAARIIKGP-NDPEKLEE 113 (311)
T ss_pred hHHHHHHHHHHHCC-C-EEECCCHHHHHHHHHH-hhCCCCeEEEeCCCcHHHHH----HHHHcCCEEeecC-CCHHHHHH
Confidence 56899999999984 4 555555 589888775 44589999999999988653 4455677776653 57899988
Q ss_pred hccCCCceEEEEeCCCCCCCccccH---HHHHHHHHhCCCEEEEeCCCCCCCcc-cccccCCcEEEECCccccCCCCCce
Q 009167 291 ALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSATKFIGGHNDVL 366 (541)
Q Consensus 291 al~~~~tklV~lesP~NPtG~i~dl---~~Ia~la~~~gi~lIvDea~a~~~~~-~~~~~gaDivv~S~sK~lgg~gd~~ 366 (541)
++++ ++++++++||||||.+++. ++|+++|+++|+++|+||+|...... ........+++.|+||.++-+| ..
T Consensus 114 ~~~~--~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~G-lR 190 (311)
T PRK08354 114 LVER--NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPG-IR 190 (311)
T ss_pred hhcC--CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCcc-ce
Confidence 8763 6789999999999999984 56777788999999999998765432 1122345689999999998555 45
Q ss_pred EEEEEeChHHHHHHHHHh
Q 009167 367 AGSISGSGKLVTQIRNLH 384 (541)
Q Consensus 367 gG~lv~~~~li~~l~~~~ 384 (541)
.|++++ +.+.++...
T Consensus 191 iG~~v~---~~~~l~~~~ 205 (311)
T PRK08354 191 VGYVKG---FEEAFRSVR 205 (311)
T ss_pred eeeeee---hHHHHHHcC
Confidence 788887 455555544
No 197
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.87 E-value=7e-20 Score=195.25 Aligned_cols=170 Identities=16% Similarity=0.184 Sum_probs=139.5
Q ss_pred chhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC---
Q 009167 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e---~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
....+++++.+++++|.+ ..+++++|++++..++..++++||+|+++++.|.+.. +...+++.|++++.++.
T Consensus 41 ~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~ 118 (401)
T PLN02409 41 PALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWG 118 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCC
Confidence 356778899999999873 2566777889999999999999999999998887643 33556777888887753
Q ss_pred --CCHHHHHHhccC---CCceEEEEeCCCCCCCccccHHHHHHH--HHhCCCEEEEeCCCCCC-CcccccccCCcEEEEC
Q 009167 283 --ADMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDL--CHKKGAIVCIDGTFATP-LNQKALSLGADLVLHS 354 (541)
Q Consensus 283 --~d~e~Le~al~~---~~tklV~lesP~NPtG~i~dl~~Ia~l--a~~~gi~lIvDea~a~~-~~~~~~~~gaDivv~S 354 (541)
.|+++|++++++ +++++|++.++.||||.+.|+++|.++ |+++|+++|+|++++.+ .+.+..++++|+++.|
T Consensus 119 ~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s 198 (401)
T PLN02409 119 QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTG 198 (401)
T ss_pred CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEc
Confidence 368999999975 258999999999999999999999999 99999999999998754 3345556799999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHH
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRN 382 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~ 382 (541)
.+|+++++. ..|+++.++++++++..
T Consensus 199 ~~K~l~~P~--G~G~l~~~~~~~~~~~~ 224 (401)
T PLN02409 199 SQKALSLPT--GLGIVCASPKALEASKT 224 (401)
T ss_pred CccccCcCC--CcceeEECHHHHHHHhc
Confidence 999997654 26899999888877653
No 198
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.87 E-value=8.3e-20 Score=192.61 Aligned_cols=278 Identities=17% Similarity=0.131 Sum_probs=180.0
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHH
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~ 287 (541)
.++.++++|++||+++|.+.+++++||+.|+..++..+.++||.|+++...|.++...+.. +. +..+. +...|+++
T Consensus 54 ~~~~~~~~e~~la~~~~~~~~l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~-~~--~~~~~-~~~~d~~~ 129 (370)
T PRK05937 54 PSSLLDDLEHKIAHFHGAPEAFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSV-IS--GWHQS-FRHNDLDH 129 (370)
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHH-cC--CceEE-ecCCCHHH
Confidence 5678999999999999999899999999888776666667889999989999887766543 22 33443 46678999
Q ss_pred HHHhccC-----CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccc----cccC---CcEEEEC
Q 009167 288 LEAALNN-----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKA----LSLG---ADLVLHS 354 (541)
Q Consensus 288 Le~al~~-----~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~----~~~g---aDivv~S 354 (541)
|++.+++ .++++|++++++|++|.++|+++|.++|+++|+++++|++++.+. ..+. ..++ .++++.|
T Consensus 130 l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~t 209 (370)
T PRK05937 130 LESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVT 209 (370)
T ss_pred HHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEe
Confidence 9998862 236688899999999999999999999999999999999988653 2221 1222 2367889
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKR 432 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~ 432 (541)
++|.+|+.| +|+ ++.+++.+.+.... ..+....++.....+..+++.+....++..+..+.+.++|.+. +..
T Consensus 210 lsK~~g~~G---~~v-l~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~--l~~ 283 (370)
T PRK05937 210 YSKALGSMG---AAL-LSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQK--FSS 283 (370)
T ss_pred chhhhhcCc---eEE-EcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh--cCC
Confidence 999998765 444 45566555544211 1223334454444344445444221111222233333444321 100
Q ss_pred EeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcC
Q 009167 433 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 512 (541)
Q Consensus 433 v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~g 512 (541)
.. .+.+..|.+++. ....+.+.|...++.++. .+.|
T Consensus 284 -~~------------------~~~~~~i~~~~~--~~~~~~~~L~~~gi~v~~------~~~~----------------- 319 (370)
T PRK05937 284 -AA------------------PGCVQPIFLPGI--SEQELYSKLVETGIRVGV------VCFP----------------- 319 (370)
T ss_pred -CC------------------CCCEEEEEeCCh--hHHHHHHHHHHCCeeEEe------eCCC-----------------
Confidence 00 112334556532 335566666655664431 1112
Q ss_pred CCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 513 IMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 513 i~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+.||+|++..++++.++.+.++|++
T Consensus 320 -~~~~iRis~~~~~t~edid~l~~~L~~ 346 (370)
T PRK05937 320 -TGPFLRVNLHAFNTEDEVDILVSVLAT 346 (370)
T ss_pred -CCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 135799999998888888888777754
No 199
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.87 E-value=1.5e-19 Score=191.03 Aligned_cols=258 Identities=14% Similarity=0.096 Sum_probs=185.0
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-----
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----- 282 (541)
.+..+++++.+++++|.+++++++||++|+.+++.++ +++||+|+++.++|.++...+ ...|+++.+++.
T Consensus 30 ~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~----~~~G~~~v~~d~d~~~~ 105 (375)
T PRK11706 30 GGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF----VLRGAKIVFVDIRPDTM 105 (375)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcC
Confidence 4678999999999999999999999999998887766 799999999999999876443 446888888864
Q ss_pred -CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc--ccccccCCcEEEECCc--c
Q 009167 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKALSLGADLVLHSAT--K 357 (541)
Q Consensus 283 -~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~--~~~~~~gaDivv~S~s--K 357 (541)
.|++++++++++ ++++|++. |++|...|+++|.++|+++|++||+|++++.+.. ..+.....|+.++|++ |
T Consensus 106 ~~d~~~le~~i~~-~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K 181 (375)
T PRK11706 106 NIDETLIEAAITP-KTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETK 181 (375)
T ss_pred CcCHHHHHHhcCC-CCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCCc
Confidence 378999999987 59999874 5789999999999999999999999999876543 2233333588888887 9
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHHhhh-------------------cCC--CchHHHHHHHHHhHHHHHHHHHHHHHH
Q 009167 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHV-------------------LGG--ALNPNAAYLIIRGMKTLHLRVQQQNST 416 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~~~li~~l~~~~~~-------------------~G~--~~s~~~a~l~l~~l~tl~~r~~~~~~~ 416 (541)
.++.+. .|++++.++++.++++..+.. .|. .++...+..++..++.++...++..++
T Consensus 182 ~l~~g~--gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~ 259 (375)
T PRK11706 182 NYTAGE--GGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLAL 259 (375)
T ss_pred cccccC--CeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 997532 244566667888777654421 121 234566666677788888888888888
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccC
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G 486 (541)
+..+.+.|.+.+....+..|..+.... ....++++.++.+ ....++++.|...||.++.+
T Consensus 260 ~~~~~~~L~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~r~~l~~~L~~~gI~~~~~ 319 (375)
T PRK11706 260 WQRYYDALAPLAEAGRIELPSIPDDCK---------HNAHMFYIKLRDL-EDRSALINFLKEAGIMAVFH 319 (375)
T ss_pred HHHHHHHhcCCCcCCeeecCCCCCCCc---------eeeEEEEEEECCc-CCHHHHHHHHHHCCCCcccc
Confidence 888888887765322233332211000 0123567777532 34567777787777766543
No 200
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.87 E-value=1.7e-19 Score=189.75 Aligned_cols=277 Identities=14% Similarity=0.063 Sum_probs=187.0
Q ss_pred hhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc------cCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV------PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all------~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+++++.||+++|.+ ..+++++|++++..++.++. ++||+|++++++|.+.. ..++..|++++.++
T Consensus 59 ~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~----~~~~~~G~~~~~v~ 134 (373)
T TIGR03812 59 KIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFE----KAAEMLGLELRYAP 134 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHH----HHHHHcCCeEEEEe
Confidence 45688999999999984 45778888888888776553 46799999999997743 34456688888776
Q ss_pred C-----CCHHHHHHhccCCCce-EEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-----------cccc
Q 009167 282 P-----ADMEGLEAALNNNNVS-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----------QKAL 344 (541)
Q Consensus 282 ~-----~d~e~Le~al~~~~tk-lV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-----------~~~~ 344 (541)
. .|+++++++++++ +. ++++ +|+||||.+.|+++|.++|+++|+++|+|++|+.+.. .+..
T Consensus 135 ~~~~~~~d~~~l~~~l~~~-~~~vv~~-~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~ 212 (373)
T TIGR03812 135 LDEDYTVDVKDVEDLIDDN-TIGIVGI-AGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFS 212 (373)
T ss_pred eCCCCCcCHHHHHHHHhhC-cEEEEEE-CCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcccc
Confidence 4 3899999999764 54 4555 5899999999999999999999999999999874321 1111
Q ss_pred ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhc-C-------CCchHHHHHHHHHhHHH-----HHHHHH
Q 009167 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL-G-------GALNPNAAYLIIRGMKT-----LHLRVQ 411 (541)
Q Consensus 345 ~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~-G-------~~~s~~~a~l~l~~l~t-----l~~r~~ 411 (541)
..++|.+..|.+|+..++. ..||+++.++++++.++...... + ++.+......+...++. ++.+.+
T Consensus 213 ~~~~d~~~~s~~K~~~~~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~ 291 (373)
T TIGR03812 213 LPGVQSITIDPHKMGLSPI-PAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVA 291 (373)
T ss_pred CCCCCEEEECccccCCCcC-CceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHH
Confidence 2378999999999754332 13567777888777664211111 1 12222222222233332 334556
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccc
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
+..++++++.+.|++.+.. .+ ++. ..+++.|.+++. ..+.+.|...++.++.+.
T Consensus 292 ~~~~~~~~l~~~L~~~g~~-~~-~~~----------------~~~~v~~~~~~~----~~v~~~L~~~gi~v~~~~---- 345 (373)
T TIGR03812 292 ECMENTRYLVEELKKIGFE-PV-IEP----------------VLNIVAFEVDDP----EEVRKKLRDRGWYVSVTR---- 345 (373)
T ss_pred HHHHHHHHHHHHHHhCCCe-EE-cCC----------------CceEEEEEeCCH----HHHHHHHHHCCceeccCC----
Confidence 6777888888888876432 12 221 246788888642 245555554455443210
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
.++.||+|++..++++.++.+.++|++|
T Consensus 346 ----------------------~~~~iRis~~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 346 ----------------------CPKALRIVVMPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred ----------------------CCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence 2458999999888888899999998875
No 201
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.87 E-value=9.7e-20 Score=191.25 Aligned_cols=276 Identities=13% Similarity=0.068 Sum_probs=183.4
Q ss_pred hHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhcc----CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC--
Q 009167 211 TTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP----AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~----pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~-- 282 (541)
..+++++.||+++|.+ ..+++++|++++..++.++.. +||+|+++++.|.+.. ..++..|++++.++.
T Consensus 60 ~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~~~ 135 (371)
T PRK13520 60 LEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFD----KAADMLGVELRRAPLDD 135 (371)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHH----HHHHHcCceEEEecCCC
Confidence 3478999999999974 457778888999888876643 5799999999987643 344556888887763
Q ss_pred ---CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc---c-----cccccCCcEE
Q 009167 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---Q-----KALSLGADLV 351 (541)
Q Consensus 283 ---~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~---~-----~~~~~gaDiv 351 (541)
.|+++|+++++++ +++|++.+++|+||.+.|+++|.++|+++|+++++|++|+.+.. . +....++|.+
T Consensus 136 ~~~~d~~~l~~~i~~~-~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~ 214 (371)
T PRK13520 136 DYRVDVKAVEDLIDDN-TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSI 214 (371)
T ss_pred CCcCCHHHHHHHHhhC-CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceE
Confidence 3899999999874 77777778899999999999999999999999999999874321 1 1112478999
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhh--------cCCCchHHHHHHHHHhHHH-----HHHHHHHHHHHHH
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------LGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTAL 418 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--------~G~~~s~~~a~l~l~~l~t-----l~~r~~~~~~~a~ 418 (541)
..|.+|+..++. ..|++++.++++++.+...... .+++.++.....+...++. +..+.++..++++
T Consensus 215 ~~s~~K~~~a~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~ 293 (371)
T PRK13520 215 TIDPHKMGLAPI-PAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTR 293 (371)
T ss_pred EECCccccCccC-CceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHH
Confidence 999999865432 1345555666677665421111 0111222222222223322 3345566677788
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
++.+.|++. ++..+..| ..+++.|.++. ..++.+.|...++.++.+.
T Consensus 294 ~l~~~L~~~-g~~~~~~~-----------------~~~~v~~~~~~----~~~v~~~L~~~gi~v~~~~----------- 340 (371)
T PRK13520 294 WLAEELKER-GFEPVIEP-----------------VLNIVAFDDPN----PDEVREKLRERGWRVSVTR----------- 340 (371)
T ss_pred HHHHHHHhC-CCEEecCC-----------------CceEEEEecCC----HHHHHHHHHHCCceeccCC-----------
Confidence 888888765 44322211 24578888763 3345555544455544311
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+.||+|++..++++.++.+.++|++
T Consensus 341 ---------------~~~~iRis~~~~~t~edi~~~~~~l~~ 367 (371)
T PRK13520 341 ---------------CPEALRIVCMPHVTREHIENFLEDLKE 367 (371)
T ss_pred ---------------CCCEEEEEEECCCCHHHHHHHHHHHHH
Confidence 135799999877777777777777654
No 202
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.86 E-value=1.6e-19 Score=191.68 Aligned_cols=286 Identities=16% Similarity=0.119 Sum_probs=186.8
Q ss_pred hhHHHHHHHHHHHhCCC--cEEEeCCHHH-HHHHHHHHhccC--CCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-
Q 009167 210 PTTVVVEEKMSALEGAE--STVIMASGMS-ASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e--~~i~~sSGs~-Ai~~al~all~p--Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~- 283 (541)
+..+++++++++++|.+ +++++++|++ ++..++..++.+ ||+|+++++.|+.+...+....+..|.+++.++..
T Consensus 64 ~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~ 143 (398)
T cd00613 64 QALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE 143 (398)
T ss_pred HHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC
Confidence 45678899999999975 6667776764 444555555666 99999999999998766654445566888777643
Q ss_pred ----CHHHHHHhccCCCceEEEEeCCCCCCCccccH-HHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEEECCcc
Q 009167 284 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDV-KLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATK 357 (541)
Q Consensus 284 ----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl-~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv~S~sK 357 (541)
|++++++++.+ +|++|++++|+ ++|.+.|+ ++|.++|+++|+++|+|+++..+ ...++...++|+++.|+||
T Consensus 144 ~~~~d~~~l~~~i~~-~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K 221 (398)
T cd00613 144 GGTVDLEALKEEVSE-EVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQK 221 (398)
T ss_pred CCCcCHHHHHHhcCC-CeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccc
Confidence 68999999987 49999999985 89999985 99999999999999999987542 3344556789999999999
Q ss_pred ccCCC--CCceEEEEEeChHHHHHHHHH-------------------------hhhcCC--Cc--hHH---HHHHHHHhH
Q 009167 358 FIGGH--NDVLAGSISGSGKLVTQIRNL-------------------------HHVLGG--AL--NPN---AAYLIIRGM 403 (541)
Q Consensus 358 ~lgg~--gd~~gG~lv~~~~li~~l~~~-------------------------~~~~G~--~~--s~~---~a~l~l~~l 403 (541)
++.+. |...+|+++.++++++.+... +...|. .. .+. .++..+..+
T Consensus 222 ~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~ 301 (398)
T cd00613 222 TGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYL 301 (398)
T ss_pred cCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHh
Confidence 98432 123478999888777654110 000010 00 111 122211111
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHHHHccCcC
Q 009167 404 --KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPY 480 (541)
Q Consensus 404 --~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~~~~ 480 (541)
+.+....++..+++.++.+.|++.+... .+. . ...++++|.++.. .....++.+.|...+
T Consensus 302 ~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~---~~~---~-----------~~~~~v~~~~~~~~~~~~~~~~~~L~~~g 364 (398)
T cd00613 302 GPEGLKEIAERAHLNANYLAKRLKEVGGVL---PFN---G-----------PFFHEFVLRLPPLYGIRAEDLAKALIDGG 364 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---cCC---C-----------CeeEEEEEEcCCcchHHHHHHHHhhhhcC
Confidence 1233344556667777888887765432 111 0 1234567777631 234566777776544
Q ss_pred eecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 481 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 481 iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
+.+.. ..+ ...+.||+|+...++++.++.+.++|
T Consensus 365 i~~~~-------~~~-----------------~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 365 FHAPT-------MYL-----------------PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred ccccc-------ccc-----------------CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 32110 000 02468999999999998888877654
No 203
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.86 E-value=1.2e-19 Score=193.16 Aligned_cols=247 Identities=21% Similarity=0.188 Sum_probs=161.8
Q ss_pred HHHHHHHhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHH-hhcccCCeEEEEe--CCC------CH
Q 009167 216 EEKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE-TVLPKMGITATVI--DPA------DM 285 (541)
Q Consensus 216 e~~LA~l~g~e~~-i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~-~~l~~~Gi~v~~v--d~~------d~ 285 (541)
++.+++++|.+.. ++++||++|+.+++.+++++||+|+++.++|++...... ..++..|.++..+ +.+ |+
T Consensus 71 ~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~ 150 (402)
T cd00378 71 IERAKKLFGAEYANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDY 150 (402)
T ss_pred HHHHHHHhCCCceeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCH
Confidence 3457789998654 566789999999999999999999999999987543211 1144456554443 222 89
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-----ccccccCCcEEEECCccccC
Q 009167 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATKFIG 360 (541)
Q Consensus 286 e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-----~~~~~~gaDivv~S~sK~lg 360 (541)
+++++++.+.++++|++++|+|| ...|+++|+++|+++|+++|+|+++..+.. ..+.. ++|+++.|+||+++
T Consensus 151 ~~l~~~i~~~~~~~v~~~~~~~~--~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~dv~~~s~sK~l~ 227 (402)
T cd00378 151 DALEKMALEFKPKLIVAGASAYP--RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GADVVTTTTHKTLR 227 (402)
T ss_pred HHHHHHHHhCCCCEEEecCcccC--CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCcEEEeccccCCC
Confidence 99999986435899999888765 567999999999999999999999643221 22334 68999999999996
Q ss_pred CCCCceEEEEEeCh-HHHHHHHHHhhh--cCCCchHHHHH--H-HHHhHH-HHHHHHHHHHHHHHHHHHHHHhCCCceEE
Q 009167 361 GHNDVLAGSISGSG-KLVTQIRNLHHV--LGGALNPNAAY--L-IIRGMK-TLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (541)
Q Consensus 361 g~gd~~gG~lv~~~-~li~~l~~~~~~--~G~~~s~~~a~--l-~l~~l~-tl~~r~~~~~~~a~~la~~L~~~p~v~~v 433 (541)
|+. +|++++++ +++++++..... .+....+..+. . +....+ ....+.++..++++.+.+.|.++ ++..+
T Consensus 228 G~~---gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 303 (402)
T cd00378 228 GPR---GGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVV 303 (402)
T ss_pred CCC---ceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEe
Confidence 553 67777776 888887654321 22211111111 1 111222 34455677778888899999876 33222
Q ss_pred eCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeeccc
Q 009167 434 HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 485 (541)
Q Consensus 434 ~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~ 485 (541)
..|. .+.++|+.+++.......+.+.|+..++.+..
T Consensus 304 ~~~~----------------~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~ 339 (402)
T cd00378 304 SGGT----------------DNHLVLVDLRPKGITGKAAEDALEEAGITVNK 339 (402)
T ss_pred ecCC----------------CCeEEEEeCCccCCCHHHHHHHHHHcCcEEcC
Confidence 1121 35688898863211223444455555666654
No 204
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.86 E-value=1.6e-19 Score=182.73 Aligned_cols=309 Identities=20% Similarity=0.213 Sum_probs=210.3
Q ss_pred cccCccccCChHHHHHHHhcc-cCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcC
Q 009167 178 VNTSAYFFKKTAELIDFKEKR-RASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTT 256 (541)
Q Consensus 178 ~~sst~~~~~~~~~~~~~~~~-~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~ 256 (541)
++|.++.-+..+.++.....+ .+.-.|| .+|...++++++++++|.+.++|++|||+|+.++|.+.++||+.|++..
T Consensus 4 f~SDn~~g~~~~m~eam~~a~~~~~~~YG--~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~ 81 (342)
T COG2008 4 FRSDNVAGPTPEMREALAAANAVGDDVYG--EDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQPGESVICHE 81 (342)
T ss_pred cccCccCCCCHHHHHHHHhccccCCCCCC--CCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCCCCeEEEec
Confidence 566777777777666655444 3344566 5799999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHHhhcccC--CeEEEEeCC----CCHHHHHHhccCC-----CceEEEEeCCCCCCCccccHH---HHHHHH
Q 009167 257 DCYRKTRIFIETVLPKM--GITATVIDP----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVK---LVSDLC 322 (541)
Q Consensus 257 ~~y~~~~~~~~~~l~~~--Gi~v~~vd~----~d~e~Le~al~~~-----~tklV~lesP~NPtG~i~dl~---~Ia~la 322 (541)
..|-.++..- ..+.+ +.++..++. .++++|++.+.++ .+.++++++..|..|+++|++ +|.++|
T Consensus 82 ~aHi~~~E~G--a~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~ 159 (342)
T COG2008 82 TAHIYTDECG--APEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVC 159 (342)
T ss_pred cccceecccC--cHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHH
Confidence 8885543221 11111 234443442 3799999987632 367777888888889999855 777889
Q ss_pred HhCCCEEEEeCCC------CCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHH--
Q 009167 323 HKKGAIVCIDGTF------ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN-- 394 (541)
Q Consensus 323 ~~~gi~lIvDea~------a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~-- 394 (541)
|++|++|++|.+- +.+....-...++|++..++||.++.++ +.+++++.+++++++.++...|+.++..
T Consensus 160 k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~ 236 (342)
T COG2008 160 KEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKARF 236 (342)
T ss_pred HHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhhH
Confidence 9999999999991 1122233345689999999999988663 5677889999999998888888766532
Q ss_pred HHHHHHHhHHHHHHHHHHHHHH--HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHH
Q 009167 395 AAYLIIRGMKTLHLRVQQQNST--ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 472 (541)
Q Consensus 395 ~a~l~l~~l~tl~~r~~~~~~~--a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~ 472 (541)
.+...+..+++-..++....+| +.+|++.|+..|+++ +..|. ..|++.+.++....
T Consensus 237 laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~-~~~~~----------------~tN~vf~~l~~~~i----- 294 (342)
T COG2008 237 LAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVK-LAFPV----------------ETNMVFVRLPESAI----- 294 (342)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCce-eccCC----------------cccEEEEECChHHH-----
Confidence 2222233444433344444455 889999998777764 33331 35788888874211
Q ss_pred HHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCC-C-CeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 473 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM-D-NLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 473 l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~-~-~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+.++..+.-.-.| . .+. . ..+|+-..+...++.++++...+++
T Consensus 295 -~~l~~~~~~~~~~-~-----------------------~~~~~~~~vRfvts~a~~~edv~~~~~~~~~ 339 (342)
T COG2008 295 -EALRLAGALFYRG-V-----------------------LIGAHGEIVRFVTSWATSEEDVDELVAAIKA 339 (342)
T ss_pred -HHHHhhchhheee-e-----------------------eccCCCceEEEEeeccCCHHHHHHHHHHHHH
Confidence 2332222100000 0 001 1 3689988887777777777776654
No 205
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.86 E-value=4.7e-20 Score=194.07 Aligned_cols=304 Identities=20% Similarity=0.218 Sum_probs=208.6
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC----
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
.+.+++||+++++++|.+.++.++||+.|+.+++.++ +++||+|+++..+|.++...+ ...|.+++++|.+
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai----~~~G~~pv~~Di~~~~~ 99 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAI----LWAGAEPVFVDIDPETL 99 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHH----HHTT-EEEEE-BETTTS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHH----HHhccEEEEEeccCCcC
Confidence 5889999999999999999999999999999999998 689999999999999876443 4468999998853
Q ss_pred --CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc--ccccCCcEEEECC--cc
Q 009167 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--ALSLGADLVLHSA--TK 357 (541)
Q Consensus 284 --d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~--~~~~gaDivv~S~--sK 357 (541)
|+++++++++++ |++|++ .+..|...|+++|.++|+++|++||.|.+++.+...+ ....-.|+.++|| +|
T Consensus 100 ~id~~~~~~~i~~~-t~ai~~---~h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~K 175 (363)
T PF01041_consen 100 NIDPEALEKAITPK-TKAILV---VHLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHPTK 175 (363)
T ss_dssp SB-HHHHHHHHHTT-EEEEEE---E-GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESSTTS
T ss_pred CcCHHHHHHHhccC-ccEEEE---ecCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCCCC
Confidence 899999999984 999988 4556999999999999999999999999987765433 2223359999998 58
Q ss_pred ccCCCCCceEEEEEeC-hHHHHHHHHHhhh-----------------cCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 009167 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV-----------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALR 419 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~-~~li~~l~~~~~~-----------------~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~ 419 (541)
.+..+. ||+++.+ +++.++++.++.. +...++.+.+.+++..|+.++.++++..+++..
T Consensus 176 ~i~~ge---GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~ 252 (363)
T PF01041_consen 176 IITTGE---GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQR 252 (363)
T ss_dssp SS-SSS----EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCcCCC---CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 886554 7888875 5677777654321 123467888999999999999999999999999
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-HHHHHHHHHccCcCeecccCCcccccccCccc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
+.+.|...+.+.....+.-... .....+.+.+++.. .....+++.|+..|+.+.......+..+|...
T Consensus 253 y~~~L~~~~~~~~~~~~~~~~~-----------~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~ 321 (363)
T PF01041_consen 253 YREALAGIPGIKPPPIPDGAER-----------SSYYRFPIRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYR 321 (363)
T ss_dssp HHHHHTTGTTEEEEGCGTTTEE-----------BCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGT
T ss_pred HHHHHhcCCCcccccccccccc-----------cccccccccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHH
Confidence 9999999887765544432110 01224556666421 13567778887777777765422232233321
Q ss_pred ccc-----CCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 499 SYW-----DLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 499 ~~~-----~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
.+. .++..+. +.+..|-|-+...-.++.++.+.+++
T Consensus 322 ~~~~~~~~~~P~ae~----l~~r~l~LP~~~~lt~edv~~I~~~i 362 (363)
T PF01041_consen 322 SYPYYAPGDLPNAER----LSQRLLSLPIHPRLTEEDVDYIAEAI 362 (363)
T ss_dssp TGEEEETSSSHHHHH----HHHHEEEEEHSTTSCHHHHHHHHHHH
T ss_pred hcCccccCCCHHHHH----HHhCeEECcCCCCCCHHHHHHHhhcc
Confidence 111 1222211 22456777777665666677776665
No 206
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.86 E-value=1.1e-19 Score=188.98 Aligned_cols=251 Identities=19% Similarity=0.216 Sum_probs=187.6
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC----
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
.|...+||+++|++.|.+.++.++||+.|+.++++++ +.|||+||++..+|..+.+.+ -..|.+..++|.+
T Consensus 33 G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i----~~~Ga~PVFvDid~~T~ 108 (374)
T COG0399 33 GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAV----LLVGAKPVFVDIDPDTL 108 (374)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHH----HHcCCeEEEEecCCccc
Confidence 5788999999999999999999999999999999966 699999999999999887544 2358888898864
Q ss_pred --CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccC--CcEEEECC--cc
Q 009167 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSA--TK 357 (541)
Q Consensus 284 --d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~g--aDivv~S~--sK 357 (541)
|++.||++|++. ||+|+. -+-.|...|+++|.++|++||++||+|.+++.+...+....| .|+.++|| +|
T Consensus 109 nid~~~ie~aIt~~-tKAIip---Vhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K 184 (374)
T COG0399 109 NIDPDLIEAAITPR-TKAIIP---VHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATK 184 (374)
T ss_pred CCCHHHHHHHcccC-CeEEEE---ehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCC
Confidence 899999999985 999986 445699999999999999999999999998776544433333 58888887 68
Q ss_pred ccCCCCCceEEEEEeC-hHHHHHHHHHhhh----------------cCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009167 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV----------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 420 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~-~~li~~l~~~~~~----------------~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~l 420 (541)
.++... ||+++.+ +++.++++.++.. +...++...+++.+..|+.++...++..++++.+
T Consensus 185 ~ittgE---GGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y 261 (374)
T COG0399 185 NLTTGE---GGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIY 261 (374)
T ss_pred CccccC---ceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887553 7888875 5677776644321 1123556778888889999999999999999999
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCee
Q 009167 421 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 482 (541)
Q Consensus 421 a~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~ia 482 (541)
.+.|++.+.+ ..|..+..-.| .-.+..+.++.....-..+++.|+..|+.
T Consensus 262 ~~~l~~~~~~---~~p~~~~~~~~---------~~~~~~i~~~~~~~~R~~l~~~L~~~gi~ 311 (374)
T COG0399 262 AEALKGLPGI---TLPPEPDGAVH---------AWHLYTILVDEEGISRDALMESLKEAGVG 311 (374)
T ss_pred HHHhhcCCCc---cccCCCCCcee---------eeeeeEEEecCCCCCHHHHHHHHHhCCCC
Confidence 9999987653 22221111001 11244555553213345667777666555
No 207
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.86 E-value=4e-20 Score=192.27 Aligned_cols=268 Identities=15% Similarity=0.100 Sum_probs=178.8
Q ss_pred chhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhcc------------CC--CEEEEcCCCCcchHHHHHhhc
Q 009167 209 NPTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP------------AG--GHIVTTTDCYRKTRIFIETVL 270 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e----~~i~~sSGs~Ai~~al~all~------------pG--d~Vlv~~~~y~~~~~~~~~~l 270 (541)
....+++.+.+++++|.+ +.+++++|++|+.+++.++.. +| +.|++++++|.+.....
T Consensus 37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~---- 112 (345)
T cd06450 37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAA---- 112 (345)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHH----
Confidence 344455566667777864 688888899999999887642 33 47888888998754433
Q ss_pred ccCCeEEEEeCC-----CCHHHHHHhccCC-----CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc
Q 009167 271 PKMGITATVIDP-----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN 340 (541)
Q Consensus 271 ~~~Gi~v~~vd~-----~d~e~Le~al~~~-----~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~ 340 (541)
...|.+++.++. .|+++|++++++. ++++|++++|+||+|.+.|+++|+++|+++|+++|+|++|+.+..
T Consensus 113 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~ 192 (345)
T cd06450 113 AYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLL 192 (345)
T ss_pred HHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHh
Confidence 233666666652 3799999998651 378999999999999999999999999999999999999876442
Q ss_pred c-cccc------cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH--HHHHHHHH
Q 009167 341 Q-KALS------LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM--KTLHLRVQ 411 (541)
Q Consensus 341 ~-~~~~------~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l--~tl~~r~~ 411 (541)
. .... .++|+++.|+||+++++. ..|+++.+ ....+.+++.+ ..+..+++
T Consensus 193 ~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~--g~g~~~~~-------------------~~~~~~~l~~l~~~g~~~~~~ 251 (345)
T cd06450 193 PFPEPRHLDFGIERVDSISVDPHKYGLVPL--GCSAVLVR-------------------ALKLWATLRRFGRDGYGEHID 251 (345)
T ss_pred hChhhHHHhcCccccCEEEEchhHhhCCCc--chHHHHHH-------------------HHHHHHHHHHHhHHHHHHHHH
Confidence 1 1111 268999999999887553 24555433 12222222222 23455666
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC---HHHHHHHHHHccCcCeecccCCc
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~---~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
+..+.++++.+.|++.+.+.-+ .+. .++++.|.+++. .....++.+.|...++.+..+
T Consensus 252 ~~~~~~~~l~~~L~~~~~~~~~-~~~----------------~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~-- 312 (345)
T cd06450 252 RIVDLAKYLAELIRADPGFELL-GEP----------------NLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPA-- 312 (345)
T ss_pred HHHHHHHHHHHHHhcCCCeEEe-cCC----------------ceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEe--
Confidence 7777888888888887765322 211 256889988752 134456666665443211111
Q ss_pred ccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHhhC
Q 009167 489 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALHAI 541 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e-~~edli~dL~~AL~~i 541 (541)
. . .+ .++.+|+|++.. ++++.++.|.++|+++
T Consensus 313 -------~--~-----------~~-~~~~lRis~~~~~~t~~di~~l~~~l~~~ 345 (345)
T cd06450 313 -------T--T-----------LG-GPNVLRFVVTNPLTTRDDADALLEDIERA 345 (345)
T ss_pred -------e--E-----------EC-CeEEEEEEecCCCCCHHHHHHHHHHHHhC
Confidence 0 0 00 246899999976 4777788888888753
No 208
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.86 E-value=4.4e-20 Score=188.96 Aligned_cols=221 Identities=19% Similarity=0.242 Sum_probs=158.6
Q ss_pred CCccCC-CCch-hHHHHHHHHHHHhCC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009167 201 SFEYGR-YGNP-TTVVVEEKMSALEGA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 201 ~~~Y~R-~~~p-~~~~Le~~LA~l~g~----e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
.+.|+| |+.| ....|++++++++|. ++.|++|+|. +++..++++++.+||+|++.+|.|....... ...
T Consensus 62 ~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~----~ma 137 (420)
T KOG0257|consen 62 TNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQV----VMA 137 (420)
T ss_pred hccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHH----hhc
Confidence 466776 4555 567788888888775 4556666666 9999999999999999999999998865443 223
Q ss_pred CeEEEEeCC-------------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCC
Q 009167 274 GITATVIDP-------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 274 Gi~v~~vd~-------------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~ 337 (541)
|.+.++++. .|.+.++.++++ +||+|++++||||||.+.+ |++|+++|++||+++|.||+|.-
T Consensus 138 G~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~ 216 (420)
T KOG0257|consen 138 GGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEW 216 (420)
T ss_pred CCcceeeccccccccccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHH
Confidence 444444432 389999999998 5999999999999999997 77999999999999999999753
Q ss_pred CCcc---------cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCC-CchHHH-HH-HHH-Hh--
Q 009167 338 PLNQ---------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG-ALNPNA-AY-LII-RG-- 402 (541)
Q Consensus 338 ~~~~---------~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~-~~s~~~-a~-l~l-~~-- 402 (541)
.+.. .|-.+...+-+.|++|+++-.| ...||+++++.++..++.......- +..+.. +. .+. ..
T Consensus 217 ~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TG-WrlGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~ 295 (420)
T KOG0257|consen 217 LVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTG-WRLGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELA 295 (420)
T ss_pred HhhCCCcceeeecCCchhheEEEeccccceeeeee-eeeeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhh
Confidence 2211 1223346789999999998666 4578999988888777765543331 222221 11 111 11
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 403 ------MKTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 403 ------l~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
......+.+...++++.|++.|.+.
T Consensus 296 ~~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 296 CLQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred ccCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1233335566778889999999876
No 209
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=1.8e-19 Score=191.70 Aligned_cols=287 Identities=14% Similarity=0.145 Sum_probs=188.4
Q ss_pred ccCCCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhh---------
Q 009167 203 EYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETV--------- 269 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~all~pG-d~Vlv~~~~y~~~~~~~~~~--------- 269 (541)
...+|.++...+|+++|+++++. +.+++++||++|+..+++....+| ++|+..++.|++........
T Consensus 78 ~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 157 (398)
T PRK03244 78 VSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAP 157 (398)
T ss_pred ccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccC
Confidence 34567888889999999999875 367788899999999998766666 56777777888753221111
Q ss_pred cccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCC------
Q 009167 270 LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL------ 339 (541)
Q Consensus 270 l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~------ 339 (541)
+...+..+..++..|++++++.+.+ ++++|++|+++||+|.+.| +++|.++|++||+++|+||++....
T Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~~~~-~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~ 236 (398)
T PRK03244 158 FEPLPGGVEHVPYGDVDALAAAVDD-DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF 236 (398)
T ss_pred CCCCCCCceEeCCCCHHHHHHhhcC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH
Confidence 1112234556666789999999865 5999999999999999998 8899999999999999999975311
Q ss_pred cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--HHHHHHHHHH
Q 009167 340 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTA 417 (541)
Q Consensus 340 ~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~~a 417 (541)
.........|++ +++|.++++ ...|++++++++++.+...........++..+..+...++.+. ...++..+..
T Consensus 237 ~~~~~~~~pDi~--t~sK~l~~G--~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~ 312 (398)
T PRK03244 237 AHQHDGVTPDVV--TLAKGLGGG--LPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLG 312 (398)
T ss_pred hhhhhCCCCCEE--EEchhhhCC--cccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 111123346766 578999853 4578888888888776542222222345566655555655432 2234444555
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcc
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~ 497 (541)
+++.+.|++.. +|.. ...++.|.+++++++. .....+.+.+...|+-++..
T Consensus 313 ~~l~~~L~~~~------~~~~----------~~v~g~g~~~~i~~~~--~~~~~~~~~l~~~Gv~~~~~----------- 363 (398)
T PRK03244 313 EQLRAGIEALG------HPLV----------DHVRGRGLLLGIVLTA--PVAKAVEAAAREAGFLVNAV----------- 363 (398)
T ss_pred HHHHHHHHhcC------CCce----------eeEeeccEEEEEEEec--cHHHHHHHHHHHCCeEEeec-----------
Confidence 66666666521 1211 1123468899999964 24566777776556443321
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009167 498 MSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~ 539 (541)
..+.|||++.. ++.+.+++.|++++.
T Consensus 364 ----------------~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~ 393 (398)
T PRK03244 364 ----------------APDVIRLAPPLIITDAQVDAFVAALPAILD 393 (398)
T ss_pred ----------------CCCEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence 13679999776 344555555555554
No 210
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.86 E-value=2.1e-19 Score=191.89 Aligned_cols=281 Identities=14% Similarity=0.120 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhccCCC---EEEEcCCCCcchHHHHHhhcccCCeEE----EEeCC
Q 009167 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGG---HIVTTTDCYRKTRIFIETVLPKMGITA----TVIDP 282 (541)
Q Consensus 212 ~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~pGd---~Vlv~~~~y~~~~~~~~~~l~~~Gi~v----~~vd~ 282 (541)
.+++++ + +++|++ +.++++|++++++.++.+++++|+ +|+++..+|++....+...+++.|+++ ..++.
T Consensus 73 ~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~ 150 (406)
T TIGR01814 73 DESLLK-L-RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP 150 (406)
T ss_pred hhhhcc-c-cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc
Confidence 344444 5 788873 566666777999999998876653 688888999987665544456667775 34432
Q ss_pred -----CCHHHHHHhcc--CCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEEC
Q 009167 283 -----ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (541)
Q Consensus 283 -----~d~e~Le~al~--~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S 354 (541)
.|++++++.++ ..+|++|++++++|.||.++|+++|.++||++|+++++|++++.+. +.+..++|+|+++.|
T Consensus 151 ~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s 230 (406)
T TIGR01814 151 REEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWC 230 (406)
T ss_pred CCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEc
Confidence 26788887774 1259999999999999999999999999999999999999988764 455557799999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHh-h--------------h--------cCCCchHHHHHHHHHhHHHH-----
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH-H--------------V--------LGGALNPNAAYLIIRGMKTL----- 406 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-~--------------~--------~G~~~s~~~a~l~l~~l~tl----- 406 (541)
.+|+++++.+ +|+++.++. ...+.... . . ..++.+....+.+..+++.+
T Consensus 231 ~hK~l~g~pG--~~l~v~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~ 307 (406)
T TIGR01814 231 TYKYLNAGPG--AGAFVHEKH-AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGM 307 (406)
T ss_pred CccccCCCCC--eEEEEehhh-hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCH
Confidence 9999864321 454444433 22221110 0 0 01223333333333344433
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC----CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCee
Q 009167 407 HLRVQQQNSTALRMAKILEAHP----KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 482 (541)
Q Consensus 407 ~~r~~~~~~~a~~la~~L~~~p----~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~ia 482 (541)
....++.....+++.+.|++.+ .+. +..|. .+ ...+++++|.++. ....+.+.|...++.
T Consensus 308 ~~i~~~~~~l~~~l~~~l~~~~~~~~~~~-i~~~~---~~---------~~r~~~v~~~~~~---~~~~~~~~L~~~gi~ 371 (406)
T TIGR01814 308 EALRKKSLLLTDYLEELIKARCGGPPVLT-IITPR---DH---------AQRGCQLSLTHPV---PGKAVFQALIKRGVI 371 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCceE-EeCCC---Ch---------hhcCCeEEEEecC---CHHHHHHHHHHCCEE
Confidence 2222334445555666665532 232 22221 11 1136788998862 234455555544544
Q ss_pred cccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe-cCCCHHHHHHHHHHHHhh
Q 009167 483 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GVEDFEDLKADVLQALHA 540 (541)
Q Consensus 483 vS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv-G~e~~edli~dL~~AL~~ 540 (541)
+.. ..++.||+|+ +..++++.++.+.++|++
T Consensus 372 v~~---------------------------~~~~~iRiS~~~~~nt~~did~l~~~l~~ 403 (406)
T TIGR01814 372 GDK---------------------------REPSVIRVAPVPLYNTFVDVYDAVNVLEE 403 (406)
T ss_pred Eec---------------------------cCCCeEEEechhccCCHHHHHHHHHHHHH
Confidence 321 0235899999 588888888888888865
No 211
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.85 E-value=9e-20 Score=209.70 Aligned_cols=325 Identities=14% Similarity=0.079 Sum_probs=205.0
Q ss_pred cccCCCccCCCCchhHHHHHHHHHHHhCCC--c-EEEeC-CHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcc
Q 009167 197 KRRASFEYGRYGNPTTVVVEEKMSALEGAE--S-TVIMA-SGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLP 271 (541)
Q Consensus 197 ~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e--~-~i~~s-SGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~ 271 (541)
+.++.|..++......++.|+++|+++|++ + .|+|+ +.++|+++++.++ +++||+|+++...|.+...++ ..++
T Consensus 65 np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~-~~a~ 143 (805)
T PLN02724 65 NPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIR-EYAL 143 (805)
T ss_pred CCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHH-HHHH
Confidence 444445556666778899999999999972 3 34555 5569999999887 789999999999998877544 5566
Q ss_pred cCCeEEEEeCCC-------------C--HHHHHHhcc---------CCCceEEEEeCCCCCCCccccHHHHHHHHHhC--
Q 009167 272 KMGITATVIDPA-------------D--MEGLEAALN---------NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-- 325 (541)
Q Consensus 272 ~~Gi~v~~vd~~-------------d--~e~Le~al~---------~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~-- 325 (541)
+.|+++.+++.+ + .++|++.++ ..++++|.+.+.+|.||.++|++.|..+++..
T Consensus 144 ~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~ 223 (805)
T PLN02724 144 EKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHS 223 (805)
T ss_pred HcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhccc
Confidence 779888887643 1 144555431 12478999999999999999999775555432
Q ss_pred ------CCEEEEeCCCCCC-CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhc-----------
Q 009167 326 ------GAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL----------- 387 (541)
Q Consensus 326 ------gi~lIvDea~a~~-~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~----------- 387 (541)
++++++|.+++.+ .+.+..++++|+++.|+||++|++.+ .|+++.++++.+.+.......
T Consensus 224 ~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G--~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~ 301 (805)
T PLN02724 224 NFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTG--LGALLVRRDAAKLLKKKYFGGGTVAASIADID 301 (805)
T ss_pred ccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCC--ceEEEEehhhhhhhcCCccCCCceEEEecccc
Confidence 3689999998765 44566678999999999999994432 688888887776655321111
Q ss_pred -------------CCCchHHHHHHHHHhHHHHHH----HH-HHHHHHHHHHHHHHHhCC------CceEEeCCCCCCCch
Q 009167 388 -------------GGALNPNAAYLIIRGMKTLHL----RV-QQQNSTALRMAKILEAHP------KVKRVHYPGLKSHPE 443 (541)
Q Consensus 388 -------------G~~~s~~~a~l~l~~l~tl~~----r~-~~~~~~a~~la~~L~~~p------~v~~v~~P~l~s~p~ 443 (541)
.++++......+..+++.+.. ++ ++.....+++.+.|.+.+ .| .++-|.-.. +
T Consensus 302 ~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v-~iyg~~~~~-~- 378 (805)
T PLN02724 302 FVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVC-VLYGNHTFK-L- 378 (805)
T ss_pred eeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEE-EEcCCCCCC-C-
Confidence 112222222223334444322 11 223345566666676654 23 233231000 0
Q ss_pred hhhHhhhccCcccEEEEEEcCC------HHHHHHHHHHccCcCeecccCCcccccccCccc-cccCCCHHHHH-------
Q 009167 444 HHIATQQMTGFGGVVSFEVDGD------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIM-SYWDLSQSERL------- 509 (541)
Q Consensus 444 ~~l~~~~~~g~g~~vsf~l~~~------~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~-~~~~~~~~~~~------- 509 (541)
.....+++++|.+.+. ...+..+. ...+|.++.|..|. |... .+..+..++..
T Consensus 379 ------~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~---~~~gI~vR~G~~Ca----~~~~~~~lg~~~~~l~~~~~~~~ 445 (805)
T PLN02724 379 ------EFHIQGPIVTFNLKRADGSWVGHREVEKLA---SLSGIQLRTGCFCN----PGACAKYLGLSHKDLQANFEAGH 445 (805)
T ss_pred ------CcccccCEEEEEEEcCCCCEeCHHHHHHHH---HhcCcEEeeccccC----chHHHHHcCCCHHHHHHHhhcCC
Confidence 0012578999999752 12233332 34588999886643 2211 11111211111
Q ss_pred --------hcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 510 --------KYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 510 --------~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+...+.||+|+|..++.+.++.|.++|++
T Consensus 446 ~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 446 VCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred ccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 0122348999999999999999999998875
No 212
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.85 E-value=3.6e-19 Score=190.43 Aligned_cols=254 Identities=19% Similarity=0.173 Sum_probs=167.6
Q ss_pred chhHHHHHH----HHHHHhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHh-hcccCCeEEEEeCC
Q 009167 209 NPTTVVVEE----KMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVIDP 282 (541)
Q Consensus 209 ~p~~~~Le~----~LA~l~g~e~~-i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~-~l~~~Gi~v~~vd~ 282 (541)
.+..+.+++ .+++++|.+.. ++++||++|+..++.+++++||+|+++.++|++....... .+...|.++..++.
T Consensus 66 ~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (416)
T PRK00011 66 CEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGV 145 (416)
T ss_pred chHHHHHHHHHHHHHHHHhCCCceeeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCc
Confidence 344555555 89999998655 6678999999999999999999999999999764321111 12334566666542
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-----ccccccCCcEE
Q 009167 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLV 351 (541)
Q Consensus 283 ------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-----~~~~~~gaDiv 351 (541)
.|++++++++++.++++|+++.++ +|...|+++|.++|+++|+++|+|++++.+.. ..+.. ++|++
T Consensus 146 ~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~--~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~ 222 (416)
T PRK00011 146 DEETGLIDYDEVEKLALEHKPKLIIAGASA--YSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVV 222 (416)
T ss_pred CcccCCcCHHHHHHHHHhcCCCEEEECCCc--CCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEE
Confidence 379999999975358999986554 45678999999999999999999999754321 12334 68999
Q ss_pred EECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhh--cCCCchHHHHHHHH---HhH-HHHHHHHHHHHHHHHHHHHHH
Q 009167 352 LHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHV--LGGALNPNAAYLII---RGM-KTLHLRVQQQNSTALRMAKIL 424 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~--~G~~~s~~~a~l~l---~~l-~tl~~r~~~~~~~a~~la~~L 424 (541)
+.|+||+++|+ .+|+++++ ++++++++..... .+.......+.+.. ..+ +.+..+.++..++++.+.+.|
T Consensus 223 ~~S~~K~l~g~---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L 299 (416)
T PRK00011 223 TTTTHKTLRGP---RGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEAL 299 (416)
T ss_pred EecCCcCCCCC---CceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999998654 37888885 6888887765432 12111222221111 111 124566778888999999999
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeeccc
Q 009167 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 485 (541)
Q Consensus 425 ~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~ 485 (541)
++. ++. +. +. . ..++++++.+++.......+.+.|+..|+.++.
T Consensus 300 ~~~-g~~-~~-~~---~-----------~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~ 343 (416)
T PRK00011 300 AER-GFR-VV-SG---G-----------TDNHLVLVDLRSKGLTGKEAEAALEEANITVNK 343 (416)
T ss_pred HhC-CCe-ee-ec---C-----------CCCeEEEEeCcccCCCHHHHHHHHHHcCcEEcc
Confidence 875 332 21 10 0 023678888853211234566666656766654
No 213
>PLN02231 alanine transaminase
Probab=99.85 E-value=1.4e-18 Score=190.90 Aligned_cols=218 Identities=16% Similarity=0.192 Sum_probs=142.4
Q ss_pred hhHHHHHHHHHHHh----CC---CcEEEeCCH-HHHHHHHHHHhcc-CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 210 PTTVVVEEKMSALE----GA---ESTVIMASG-MSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g~---e~~i~~sSG-s~Ai~~al~all~-pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.....||+.||+++ |. .+.|++++| ++|+.+++..++. +||.|+++.|.|+.....+ ...|.++..+
T Consensus 168 ~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~----~~~g~~~v~~ 243 (534)
T PLN02231 168 QGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASI----ALHGGTLVPY 243 (534)
T ss_pred CCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHH----HHcCCEEEEE
Confidence 44678888888876 32 234555555 5999999999984 7999999999998865433 3456665555
Q ss_pred CC-------CCHHHHHHhccCC-----CceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc--c-
Q 009167 281 DP-------ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--K- 342 (541)
Q Consensus 281 d~-------~d~e~Le~al~~~-----~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~--~- 342 (541)
+. .|+++|++++++. ++|+|++++|+||||.+++ +++|+++|+++|++||+||+|...... .
T Consensus 244 ~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~ 323 (534)
T PLN02231 244 YLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKK 323 (534)
T ss_pred ecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC
Confidence 32 3789999888541 4899999999999999997 558889999999999999998764321 1
Q ss_pred --cc-c----cC------CcEEEECCccccCCCCCceEEEEEe---ChHHHHHHHHHhhhc-CCC-chHHHHHHHHH---
Q 009167 343 --AL-S----LG------ADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHVL-GGA-LNPNAAYLIIR--- 401 (541)
Q Consensus 343 --~~-~----~g------aDivv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~~~~~~~-G~~-~s~~~a~l~l~--- 401 (541)
.+ . .| .-++++|+||.+.|..+.++||++. ++++++.+.+..... +.. .....+..++.
T Consensus 324 ~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~ 403 (534)
T PLN02231 324 FHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASLVMSPPK 403 (534)
T ss_pred cccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCC
Confidence 10 0 01 2377899999764322256898875 678888887654321 111 11222222221
Q ss_pred ----hHHHH----HHHHHHHHHHHHHHHHHHHhCCCce
Q 009167 402 ----GMKTL----HLRVQQQNSTALRMAKILEAHPKVK 431 (541)
Q Consensus 402 ----~l~tl----~~r~~~~~~~a~~la~~L~~~p~v~ 431 (541)
.++.. ....+...+++..+.+.|++++++.
T Consensus 404 ~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~ 441 (534)
T PLN02231 404 PGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVT 441 (534)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 11111 1113345567777888888766553
No 214
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.84 E-value=7.4e-19 Score=187.06 Aligned_cols=283 Identities=15% Similarity=0.163 Sum_probs=184.0
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc---------CC-CEEEEcCCCCcchHHHHHhhcc-----
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRKTRIFIETVLP----- 271 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~---------pG-d~Vlv~~~~y~~~~~~~~~~l~----- 271 (541)
..++...+|+++|+++.+.+.+++++||++|+..+++.... +| ++||..+..|++..........
T Consensus 79 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~ 158 (396)
T PRK04073 79 FHSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYK 158 (396)
T ss_pred cCCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccc
Confidence 45677889999999999888899999999999999886521 34 6888888888774321111110
Q ss_pred -cCC---eEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCc---
Q 009167 272 -KMG---ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (541)
Q Consensus 272 -~~G---i~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~--- 340 (541)
.++ ..+..++..|++++++++++ ++++|++|+++||+|.+.| +++|.++|+++|+++|+||+|.....
T Consensus 159 ~~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~ 237 (396)
T PRK04073 159 RGFGPMLPGIKKIPYGDLEALKAAITP-NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGK 237 (396)
T ss_pred cCCCCCCCCceEeCCCCHHHHHHhccc-CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcH
Confidence 011 12345677799999999976 4999999999999999987 78999999999999999999764211
Q ss_pred ---ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--HHHHHHHH
Q 009167 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (541)
Q Consensus 341 ---~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~ 415 (541)
........|+++ ++|.+++++ ...|++++++++++.+...........++..+..++..|+.+. ...++..+
T Consensus 238 ~~~~~~~~~~pdi~~--~sK~lg~gg-~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~ 314 (396)
T PRK04073 238 LFACDWDNVTPDMYI--LGKALGGGV-FPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLE 314 (396)
T ss_pred HHHhhhcCCCCCEEE--ecccccCCC-CcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 122233467665 789998754 3468888999888877542221112235666666666665442 12234445
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccC
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
..+++.+.|++.. ++.+ ...++.|.+++++++. ....+.+.|...++.+..
T Consensus 315 ~~~~l~~~L~~l~------~~~i----------~~~~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~~~~---------- 365 (396)
T PRK04073 315 LGEYFKEQLKEID------NPMI----------KEVRGRGLFIGVELNE---PARPYCEALKEEGLLCKE---------- 365 (396)
T ss_pred HHHHHHHHHHhhc------CCcc----------cceecceEEEEEEecc---hHHHHHHHHHHCCeEEec----------
Confidence 5666666666531 1211 1123468889999863 345666666554543321
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
..++.|||+..+-.+++.++.+.++|+
T Consensus 366 -----------------~~~~~iRi~p~l~~t~e~i~~~~~~l~ 392 (396)
T PRK04073 366 -----------------THETVIRFAPPLVITKEELDWAFEKIK 392 (396)
T ss_pred -----------------CCCCEEEEECCcccCHHHHHHHHHHHH
Confidence 024689999665444444555555544
No 215
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.84 E-value=1.7e-18 Score=184.48 Aligned_cols=288 Identities=19% Similarity=0.169 Sum_probs=189.6
Q ss_pred CchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhhcc---------cCC
Q 009167 208 GNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP---------KMG 274 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g--~e~~i~~sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~~~l~---------~~G 274 (541)
..+...+++++|++++| .+.+++++||++|+..++..+. .++++|++.++.|++.......... ...
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL 156 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 46788999999999998 5788899999999999998763 6789999999999885433222111 112
Q ss_pred eEEEEeCCC-----------CHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCC
Q 009167 275 ITATVIDPA-----------DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 275 i~v~~vd~~-----------d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~ 337 (541)
.++..++.+ |+++|++.+++ +++++|+++..+|++|.+.+ +++|.++|++||+++|+||++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g 236 (413)
T cd00610 157 PGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTG 236 (413)
T ss_pred CCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 334556655 78999998875 35788998887888899887 99999999999999999999764
Q ss_pred C-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHH--HHHhhhcCCCchHHHHHHHHHhHHHHH--
Q 009167 338 P-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI--RNLHHVLGGALNPNAAYLIIRGMKTLH-- 407 (541)
Q Consensus 338 ~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l--~~~~~~~G~~~s~~~a~l~l~~l~tl~-- 407 (541)
. .. ........|++ |++|.+++ | ...|++++++++++.+ ...........++..+..+...++.+.
T Consensus 237 ~g~~g~~~~~~~~~~~~d~~--t~sK~l~~-g-~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~ 312 (413)
T cd00610 237 FGRTGKMFAFEHFGVEPDIV--TLGKGLGG-G-LPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEE 312 (413)
T ss_pred CCcCcchhhHhhcCCCCCeE--EEcccccC-c-cccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 2 11 11122234654 67899997 3 4578888898888876 222211122334555444444554443
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-------HHHHHHHHHHccCcC
Q 009167 408 LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALKIPY 480 (541)
Q Consensus 408 ~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-------~~~~~~~l~~L~~~~ 480 (541)
...++..++..++.+.|++.... ++.. ...++.|.++++.+... ......+.+.|...+
T Consensus 313 ~~~~~~~~~~~~l~~~l~~~~~~----~~~~----------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 378 (413)
T cd00610 313 GLLENAAELGEYLRERLRELAEK----HPLV----------GDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERG 378 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhh----CCcE----------EEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCC
Confidence 23445555666666666543110 1100 00134678999998642 134566777776656
Q ss_pred eecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 481 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 481 iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+.+..++ .+.+|+++....+++.++.+.++|++
T Consensus 379 v~v~~~~---------------------------~~~lR~~~~~~~t~~~i~~~~~~l~~ 411 (413)
T cd00610 379 LLLRPSG---------------------------GNVIRLLPPLIITEEEIDEGLDALDE 411 (413)
T ss_pred eEEeecC---------------------------CCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 5544331 35799999887766666777666654
No 216
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.84 E-value=2.2e-18 Score=185.36 Aligned_cols=255 Identities=16% Similarity=0.164 Sum_probs=180.6
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh---------ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEE
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al---------l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
.+...+||++||+++|.+.+++++||++|+.+++.++ +++||+||++.++|.++...+ ...|.++.+
T Consensus 62 G~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v----~~~G~~pv~ 137 (438)
T PRK15407 62 GRFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPI----IQNGLVPVF 137 (438)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHH----HHcCCEEEE
Confidence 4668899999999999999999999999999988875 488999999999998876444 335777777
Q ss_pred eCC------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccc--cccCCcEE
Q 009167 280 IDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA--LSLGADLV 351 (541)
Q Consensus 280 vd~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~--~~~gaDiv 351 (541)
+|. .|++++++++++ +|++|++++ ++|...++++|.++|+++|++||+|++++.+...+. ...-.|+.
T Consensus 138 vdvd~~~~~id~~~le~~i~~-~tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~gd~~ 213 (438)
T PRK15407 138 VDVELPTYNIDASLLEAAVSP-KTKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFGDIA 213 (438)
T ss_pred EecCCCcCCcCHHHHHHHcCc-CCeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccCceE
Confidence 654 278999999987 599999965 467888999999999999999999999876543332 22223899
Q ss_pred EECCc--cccCCCCCceEEEEEeCh-HHHHHHHHHhhh-------------------------------------cC--C
Q 009167 352 LHSAT--KFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-------------------------------------LG--G 389 (541)
Q Consensus 352 v~S~s--K~lgg~gd~~gG~lv~~~-~li~~l~~~~~~-------------------------------------~G--~ 389 (541)
++||+ |.+..+. ||+++.++ ++.++++..+.. .| .
T Consensus 214 ~fSf~~~k~~~~ge---GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~ 290 (438)
T PRK15407 214 TLSFYPAHHITMGE---GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNL 290 (438)
T ss_pred EEeCCCCCCccccC---ceEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccccccccccccc
Confidence 99985 5555332 68887764 455544432210 11 2
Q ss_pred CchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHH
Q 009167 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTA 468 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~ 468 (541)
.++...|++++..|+.++.++++..++++++.+.|...+.+ +..|..+....+ .-.++.+.++.. ...
T Consensus 291 rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~--~~~~~~~~~~~~---------~~~~~~i~~~~~~~~~ 359 (438)
T PRK15407 291 KITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDF--LILPEATPNSDP---------SWFGFPITVKEDAGFT 359 (438)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc--cccCcCCCCCee---------EEEEEEEEECCcCCCC
Confidence 45677888889999999999999999999999999876532 122322111000 011444555421 112
Q ss_pred HHHHHHHccCcCeeccc
Q 009167 469 TIKFIDALKIPYIAPSF 485 (541)
Q Consensus 469 ~~~~l~~L~~~~iavS~ 485 (541)
..++++.|+..+|.+..
T Consensus 360 Rd~l~~~L~~~GI~~~~ 376 (438)
T PRK15407 360 RVELVKYLEENKIGTRL 376 (438)
T ss_pred HHHHHHHHHHCCCCccc
Confidence 45677777766766553
No 217
>PLN02368 alanine transaminase
Probab=99.84 E-value=7.8e-19 Score=187.27 Aligned_cols=221 Identities=14% Similarity=0.170 Sum_probs=150.0
Q ss_pred CCCCch-hHHHHHHHHHHHh----CC---CcEEEeCCHH-HHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009167 205 GRYGNP-TTVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~----g~---e~~i~~sSGs-~Ai~~al~all-~pGd~Vlv~~~~y~~~~~~~~~~l~~~G 274 (541)
.+|+.+ ...+||++||+++ |. .+.|++++|+ +++..++.+++ .+||.|++++|+|...... +...|
T Consensus 101 ~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~----~~~~g 176 (407)
T PLN02368 101 GAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSAT----ISLLG 176 (407)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHH----HHHcC
Confidence 345443 3457888888876 53 2345555554 89999999987 7999999999999986543 34456
Q ss_pred eEEEEeCC-------CCHHHHHHhccC-----CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCC
Q 009167 275 ITATVIDP-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 275 i~v~~vd~-------~d~e~Le~al~~-----~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~ 339 (541)
.++..++. .|+++|++++++ .++|++++++|+||||.+++ +++|+++|++||++||+||+|....
T Consensus 177 ~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~ 256 (407)
T PLN02368 177 GTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNI 256 (407)
T ss_pred CEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 66665532 378999988863 14899999999999999998 5577888999999999999987643
Q ss_pred ccc-----c-c----c-------cCCcEEEECCcccc-CCCCCceEEEEE---eChHHHHHHHHHhhhcCCCchHHHHHH
Q 009167 340 NQK-----A-L----S-------LGADLVLHSATKFI-GGHNDVLAGSIS---GSGKLVTQIRNLHHVLGGALNPNAAYL 398 (541)
Q Consensus 340 ~~~-----~-~----~-------~gaDivv~S~sK~l-gg~gd~~gG~lv---~~~~li~~l~~~~~~~G~~~s~~~a~l 398 (541)
... + . . .+..+++.|+||.+ +-.| .+.||++ +++++++.+...... ....+....++
T Consensus 257 y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~G-lRiGy~i~~~~~~~li~~~~~~~~~-~~~~~~~~Q~a 334 (407)
T PLN02368 257 YQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECG-QRGGYFEMTNIPPKTVEEIYKVASI-ALSPNVSGQIF 334 (407)
T ss_pred cCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCc-cceEEEEEeCCCHHHHHHHHHHhcc-cCCCCcHHHHH
Confidence 211 1 1 1 12458889999998 4444 4688888 478888888775422 22334344433
Q ss_pred HHHhHH--------------HHHHHHHHHHHHHHHHHHHHHhCCCce
Q 009167 399 IIRGMK--------------TLHLRVQQQNSTALRMAKILEAHPKVK 431 (541)
Q Consensus 399 ~l~~l~--------------tl~~r~~~~~~~a~~la~~L~~~p~v~ 431 (541)
+...++ .+....+...+++..+.+.|++.|++.
T Consensus 335 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~ 381 (407)
T PLN02368 335 MGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVV 381 (407)
T ss_pred HHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 333332 111223445566777888888876653
No 218
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.84 E-value=1.3e-18 Score=183.45 Aligned_cols=287 Identities=14% Similarity=0.126 Sum_probs=185.8
Q ss_pred cCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh---cc----CCCEEEEcCCCCcchHHHHHhh-c-----
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---VP----AGGHIVTTTDCYRKTRIFIETV-L----- 270 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al---l~----pGd~Vlv~~~~y~~~~~~~~~~-l----- 270 (541)
..+|.++...+|+++|++++|.+++++++||++|+..+++.+ .. +||+|++.++.|++........ .
T Consensus 63 ~~~~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~ 142 (379)
T TIGR00707 63 SNLYYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQ 142 (379)
T ss_pred ccccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhh
Confidence 355678899999999999999998999999999999988754 22 3799999999998743222111 0
Q ss_pred ---ccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccc-c---HHHHHHHHHhCCCEEEEeCCCCCCCcc-c
Q 009167 271 ---PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATPLNQ-K 342 (541)
Q Consensus 271 ---~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~-d---l~~Ia~la~~~gi~lIvDea~a~~~~~-~ 342 (541)
.....++.+++.+|++++++.+++ ++++|++++++|++|... + +++|.++|+++|+++|+||+|...... .
T Consensus 143 ~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~ 221 (379)
T TIGR00707 143 KGFEPLVPGFSYAPYNDIESLKKAIDD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGK 221 (379)
T ss_pred ccCCCCCCCceeeCCCCHHHHHHHhhh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch
Confidence 111123444555689999999977 499999987777777643 3 789999999999999999998642111 1
Q ss_pred -----ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--HHHHHHHH
Q 009167 343 -----ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (541)
Q Consensus 343 -----~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~ 415 (541)
......|++ +++|.++ .| ...|++++++++++.+...........++..+..+...++.+. ...++..+
T Consensus 222 ~~~~~~~~~~~d~~--t~sK~~~-~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~ 297 (379)
T TIGR00707 222 FFAYEHYGIEPDII--TLAKGLG-GG-VPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKE 297 (379)
T ss_pred hhhHHhcCCCCCEE--EEccccc-CC-cccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 112234655 5899999 33 4578999999888887653222222345555555554554332 23344455
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccC
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
+.+.+.+.|++... .. +.. ...+.|.+++++++.+ ...+.+.|...|+.+..+
T Consensus 298 ~~~~~~~~l~~~~~--~~---~~~----------~~~~~g~~~~~~~~~~---~~~~~~~l~~~Gv~v~~~--------- 350 (379)
T TIGR00707 298 KGDYFKERLEELGK--NY---PNK----------EVRGKGLMLGIELEAP---CKDIVKKALEKGLLVNCA--------- 350 (379)
T ss_pred HHHHHHHHHHHHHh--hC---CCC----------ccccCceEEEEEecCc---HHHHHHHHHHCCcEEeeC---------
Confidence 66666666664311 11 000 0123577899998643 356666666666554431
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+.|||++....+++.++.+.++|++
T Consensus 351 ------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~ 377 (379)
T TIGR00707 351 ------------------GPKVLRFLPPLIITKEEIDEAVSALEE 377 (379)
T ss_pred ------------------CCCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 136899998764445555555555543
No 219
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.83 E-value=1.5e-18 Score=185.09 Aligned_cols=214 Identities=15% Similarity=0.111 Sum_probs=139.8
Q ss_pred chhHHHHHHHHHHHhCC-------CcEEE---eCCHHHHHHHHHH---HhccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 209 NPTTVVVEEKMSALEGA-------ESTVI---MASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~-------e~~i~---~sSGs~Ai~~al~---all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
.....+||+++|+++.. .+.|+ +.+|++|+.+++. +++++||+|++++|+|+.... .++..|.
T Consensus 71 ~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~----~~~~~G~ 146 (404)
T PTZ00376 71 IEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN----IFKSAGL 146 (404)
T ss_pred CCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCC
Confidence 34567899999997521 12344 4455577766654 678999999999999998654 4445677
Q ss_pred EEEEeCC---C----CHHHHHHhccC--CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc-
Q 009167 276 TATVIDP---A----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK- 342 (541)
Q Consensus 276 ~v~~vd~---~----d~e~Le~al~~--~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~- 342 (541)
++..++. + |++.+++++++ .+++++++++||||||.+++ +++|+++|++||++||+||+|.......
T Consensus 147 ~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~ 226 (404)
T PTZ00376 147 NVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDL 226 (404)
T ss_pred ceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCH
Confidence 7776654 2 68889888852 23678888999999999998 5577888999999999999987544311
Q ss_pred -----c-c---cc-CCcEEEECCccccCCCCCceEEEE---EeChHHHHHHH----HHhhhcCCCchHHHHHHHHHhHHH
Q 009167 343 -----A-L---SL-GADLVLHSATKFIGGHNDVLAGSI---SGSGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMKT 405 (541)
Q Consensus 343 -----~-~---~~-gaDivv~S~sK~lgg~gd~~gG~l---v~~~~li~~l~----~~~~~~G~~~s~~~a~l~l~~l~t 405 (541)
+ . .. ...+++.|+||.++..| .+.||+ ++++++++.+. ..........+...+.++...++.
T Consensus 227 ~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~G-lRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 305 (404)
T PTZ00376 227 DKDAYAIRLFAERGVEFLVAQSFSKNMGLYG-ERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSD 305 (404)
T ss_pred HHHHHHHHHHHhcCCcEEEEEeCCCcccccc-cccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCC
Confidence 0 1 11 13588999999998555 347877 56777655443 222222233344444444333321
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHhC
Q 009167 406 ----------LHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 406 ----------l~~r~~~~~~~a~~la~~L~~~ 427 (541)
+....++..++++.+.+.|+++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 337 (404)
T PTZ00376 306 PELRAEWLSELKEMSGRIQNMRQLLYDELKAL 337 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1222234456667777777765
No 220
>PLN02672 methionine S-methyltransferase
Probab=99.83 E-value=2.4e-18 Score=198.30 Aligned_cols=212 Identities=15% Similarity=0.105 Sum_probs=147.3
Q ss_pred hHHHHHHHHHHHhCCC----cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC--
Q 009167 211 TTVVVEEKMSALEGAE----STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e----~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-- 283 (541)
..+.+.+.+++.+|.+ +.|++++|+ +++..++.+++++||+|+++.|+|+..... ++..|.++..++..
T Consensus 735 lr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~----a~~~Ga~vv~Vpl~~e 810 (1082)
T PLN02672 735 PRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSA----AKFLKANFRRIPTKSS 810 (1082)
T ss_pred HHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHH----HHHcCCEEEEEecccc
Confidence 3678888998888762 367777777 788889999999999999999999886543 44557777766532
Q ss_pred -----CHHHHHHhccCCCceEEEEeCCC-CCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-cc---------c
Q 009167 284 -----DMEGLEAALNNNNVSLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-KA---------L 344 (541)
Q Consensus 284 -----d~e~Le~al~~~~tklV~lesP~-NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-~~---------~ 344 (541)
|+++|++++++.+.++|++++|| ||||.+++ +++|+++|++||++||+||+|...... .. .
T Consensus 811 ~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l 890 (1082)
T PLN02672 811 DGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSIL 890 (1082)
T ss_pred cCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHH
Confidence 57889999865334689999998 99999998 557888899999999999998742211 00 0
Q ss_pred -cc------CCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCCC-chHHHHHHHHHhH--------HHHH
Q 009167 345 -SL------GADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA-LNPNAAYLIIRGM--------KTLH 407 (541)
Q Consensus 345 -~~------gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~-~s~~~a~l~l~~l--------~tl~ 407 (541)
.. ...+++.|+||.++.+| ...||+++++ ++++.++......+.. .+...+..++..+ +.+.
T Consensus 891 ~~~~~~sks~nVIvL~SfSKkf~lpG-LRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~ 969 (1082)
T PLN02672 891 SRLKSSNPSFAVALLGGLSTELLSGG-HEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVA 969 (1082)
T ss_pred HHhccccCCceEEEEeCcHHhhccHH-HHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 01 13478889999988776 4578999864 5888887654322221 2222222222111 2233
Q ss_pred HHHHHHHHHHHHHHHHHHhC
Q 009167 408 LRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 408 ~r~~~~~~~a~~la~~L~~~ 427 (541)
...+...++++.+.+.|+++
T Consensus 970 e~r~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 970 EQKKILKSRAERLKETLEAC 989 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHC
Confidence 33445567788888899876
No 221
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.83 E-value=8.4e-18 Score=181.79 Aligned_cols=211 Identities=22% Similarity=0.222 Sum_probs=150.1
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-----
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----- 282 (541)
+++...+||++++++++.+.++++++|++|+.+++.++++||| |+++++.|..+...+ ...|.++.+++.
T Consensus 76 ~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i----~~~G~~~v~v~~~~~~~ 150 (460)
T PRK13238 76 GSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHI----ELNGATAVDLVIDEALD 150 (460)
T ss_pred CCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHH----HHcCCEEEEEecccccc
Confidence 4567889999999999999999999999999999999999999 999988777655333 234666555532
Q ss_pred ----------CCHHHHHHhccC---CCceEEEEeCCCCCCC-cccc---HHHHHHHHHhCCCEEEEeCCCCC----C---
Q 009167 283 ----------ADMEGLEAALNN---NNVSLFFTESPTNPFL-RCVD---VKLVSDLCHKKGAIVCIDGTFAT----P--- 338 (541)
Q Consensus 283 ----------~d~e~Le~al~~---~~tklV~lesP~NPtG-~i~d---l~~Ia~la~~~gi~lIvDea~a~----~--- 338 (541)
.|+++|++++++ .+|++|++++|+||+| .+++ +++|.++|++||++||+|+++.. +
T Consensus 151 ~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~ 230 (460)
T PRK13238 151 TGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQ 230 (460)
T ss_pred ccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhh
Confidence 478999999974 2599999999999997 7776 56899999999999999997521 1
Q ss_pred ----Cccccc-------ccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhh------hcCCCchHHHHHHHH
Q 009167 339 ----LNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHH------VLGGALNPNAAYLII 400 (541)
Q Consensus 339 ----~~~~~~-------~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~------~~G~~~s~~~a~l~l 400 (541)
+..... ....|+++.|++|.+.++ .||+++.+ ++++++++.... .+|+ ++......+.
T Consensus 231 ~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~---~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g-~~~~~~~Ala 306 (460)
T PRK13238 231 REPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVN---IGGLLCFRDEDLFTECRTLCILYEGFPTYGG-LAGRDMEALA 306 (460)
T ss_pred ccccccCCCHHHHhhhhcccCcEEEEecccCCCCc---ceeEEEcChHHHHHHhhhcccccCCcccccC-cHHHHHHHHH
Confidence 111111 124799999999976654 37888887 578888876531 1222 2333223333
Q ss_pred HhHHH--HHHHHHHHHHHHHHHHHHHHhC
Q 009167 401 RGMKT--LHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 401 ~~l~t--l~~r~~~~~~~a~~la~~L~~~ 427 (541)
.+++. -....+...++++.|.+.|.+.
T Consensus 307 ~~l~e~~~~~~~~~~~~~~~~l~~~L~~~ 335 (460)
T PRK13238 307 VGLYEGMDEDYLAYRIGQVEYLGEGLEEA 335 (460)
T ss_pred hhHHHhhChHHHHHHHHHHHHHHHHHHHC
Confidence 33432 1233444455678888988774
No 222
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.82 E-value=4.2e-18 Score=181.15 Aligned_cols=285 Identities=19% Similarity=0.182 Sum_probs=181.7
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc----------CCCEEEEcCCCCcchHHHHHhhcc------
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP----------AGGHIVTTTDCYRKTRIFIETVLP------ 271 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~----------pGd~Vlv~~~~y~~~~~~~~~~l~------ 271 (541)
..+..+.+++.++++.+.+.+++++||++|+..++....+ .+++|++.+..|++.....-....
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~ 150 (400)
T PTZ00125 71 YNDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYN 150 (400)
T ss_pred cCHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhc
Confidence 4567889999999998888899999999999999986531 357888888888874322111110
Q ss_pred ---cCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC-Cc---
Q 009167 272 ---KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LN--- 340 (541)
Q Consensus 272 ---~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~-~~--- 340 (541)
.....+..++..|+++|++.++..++++|++|+++||+|.+.| +++|.++|++||+++|+||++... ..
T Consensus 151 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~ 230 (400)
T PTZ00125 151 NFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKL 230 (400)
T ss_pred cCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh
Confidence 0111234556679999999996335999999999999999998 999999999999999999997532 11
Q ss_pred --ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHH--HHHHHHHH
Q 009167 341 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNST 416 (541)
Q Consensus 341 --~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~--r~~~~~~~ 416 (541)
........|+++ ++|.++++. ...|++++++++++.+...........++..+..+...++.+.. ..++..+.
T Consensus 231 ~~~~~~~~~pd~~~--~sK~l~~g~-~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~ 307 (400)
T PTZ00125 231 LAHDHEGVKPDIVL--LGKALSGGL-YPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRL 307 (400)
T ss_pred hHHHhcCCCCCEEE--EcccccCCC-cCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 111222357776 579998642 24688889999888775432211122345555555555554431 12233334
Q ss_pred HHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-CHHHHHHHHHHccCcCeecccCCcccc
Q 009167 417 ALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 417 a~~la~~L~~~----p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-~~~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
.+.+.+.|++. +.+.. .++.|.+++++++. +......+.+.|...++.+..+
T Consensus 308 ~~~l~~~l~~l~~~~~~~~~------------------~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~----- 364 (400)
T PTZ00125 308 GEVFRDGLKELLKKSPWVKE------------------IRGKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKPT----- 364 (400)
T ss_pred HHHHHHHHHHHHhcCCCeEE------------------EecccEEEEEEEccCcchHHHHHHHHHHHCCeEEeec-----
Confidence 44455555432 21111 12357788998864 2234566777765555443321
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009167 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~~ 540 (541)
.++.|||+... ++.++.++.|.++|.+
T Consensus 365 ----------------------~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 365 ----------------------HDNIIRFAPPLVITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred ----------------------CCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 14689999654 3445555666555543
No 223
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=2.3e-18 Score=186.31 Aligned_cols=301 Identities=17% Similarity=0.082 Sum_probs=179.6
Q ss_pred ccCCCccCCCCchhHHH-HHHHHHHHhCCC-cEE-Ee---CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcc
Q 009167 198 RRASFEYGRYGNPTTVV-VEEKMSALEGAE-STV-IM---ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP 271 (541)
Q Consensus 198 ~~~~~~Y~R~~~p~~~~-Le~~LA~l~g~e-~~i-~~---sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~ 271 (541)
+.+.|..|.......++ .++++++++|++ +.+ +. +||++|+.+++.+++++||+|+++...|++....+....+
T Consensus 67 p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~ 146 (452)
T PTZ00094 67 PGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAK 146 (452)
T ss_pred CCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccc
Confidence 33444444433344443 567999999984 223 33 6899999999999999999999999999886433211110
Q ss_pred ------cCCeEEEEeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc
Q 009167 272 ------KMGITATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN 340 (541)
Q Consensus 272 ------~~Gi~v~~vd~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~ 340 (541)
..++++..++. .|+++|++++++.++++|++. ++.+|.++|+++|.++|+++|+++++|++++.+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i 224 (452)
T PTZ00094 147 KKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLV 224 (452)
T ss_pred cccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccc
Confidence 11233333332 389999999964347777763 34599999999999999999999999999876543
Q ss_pred -----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-----hhcCCCchHHHHHHHHHhHHHH----
Q 009167 341 -----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGALNPNAAYLIIRGMKTL---- 406 (541)
Q Consensus 341 -----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-----~~~G~~~s~~~a~l~l~~l~tl---- 406 (541)
..+.. ++|+++.|+||+++|+. ||+++.++++.+.+.... ..+.+..++...+.+..+++.+
T Consensus 225 ~~~~~~~~~~-~~D~l~~S~hK~l~GP~---Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~ 300 (452)
T PTZ00094 225 AAGVLPSPFP-YADVVTTTTHKSLRGPR---SGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPE 300 (452)
T ss_pred cCCCCCCCCC-CCcEEEcCCccCCCCCC---ceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChh
Confidence 12333 79999999999987664 566666655444332211 1111233333333333344433
Q ss_pred -HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeeccc
Q 009167 407 -HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 485 (541)
Q Consensus 407 -~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~ 485 (541)
....++..+++.++.+.|.+. ++ .+..++-.+ .-.++.|..++ .....+...|+..+|.++.
T Consensus 301 ~~~~~~~i~~l~~~l~~~L~~~-g~-~v~~~~~~~-------------~~~~v~~~~~~--~~~~~~~~~L~~~gI~vs~ 363 (452)
T PTZ00094 301 WKEYAKQVLKNAKALAAALEKR-GY-DLVTGGTDN-------------HLVLVDLRPFG--ITGSKMEKLLDAVNISVNK 363 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-Cc-EEecCCCCC-------------ceEeecCCcCC--CCHHHHHHHHHHCCcEEec
Confidence 234456667888888888764 33 233332111 11344555443 1233444555555666652
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH----HHHHHHHHHHHh
Q 009167 486 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF----EDLKADVLQALH 539 (541)
Q Consensus 486 G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~----edli~dL~~AL~ 539 (541)
-+.. +.+ ....++.||+|++..++ ++.++.+.++|.
T Consensus 364 ~~~p---~~~---------------~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~ 403 (452)
T PTZ00094 364 NTIP---GDK---------------SALNPSGVRLGTPALTTRGAKEKDFKFVADFLD 403 (452)
T ss_pred ccCC---CCC---------------cCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHH
Confidence 2110 000 01125789999965554 555555555554
No 224
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.82 E-value=3.4e-18 Score=181.44 Aligned_cols=287 Identities=16% Similarity=0.155 Sum_probs=183.4
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh----ccCCC----EEEEcCCCCcchHHHHHhhcc--c----
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL----VPAGG----HIVTTTDCYRKTRIFIETVLP--K---- 272 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al----l~pGd----~Vlv~~~~y~~~~~~~~~~l~--~---- 272 (541)
+.++...+++++|+++.+.+.+++++||++|+..+++.. ..+|| +|++.++.|++........-. .
T Consensus 70 ~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 149 (389)
T PRK01278 70 YRIPEQERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEG 149 (389)
T ss_pred cCChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhccc
Confidence 467888999999999987788999999999999998865 45666 899999999885433211100 0
Q ss_pred C---CeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccc----cHHHHHHHHHhCCCEEEEeCCCCCCC-cc---
Q 009167 273 M---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPL-NQ--- 341 (541)
Q Consensus 273 ~---Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~----dl~~Ia~la~~~gi~lIvDea~a~~~-~~--- 341 (541)
+ .-.+..++..|++++++++++ ++++|++|.++|++|... .+++|.++|++||+++|+||+|.... ..
T Consensus 150 ~~~~~~~~~~~~~~d~~~l~~~l~~-~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~ 228 (389)
T PRK01278 150 FGPLVPGFDQVPFGDIEALKAAITP-NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF 228 (389)
T ss_pred CCCCCCCceEeCCCCHHHHHHhhCC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce
Confidence 0 011233455789999999987 599999999889888443 48899999999999999999976321 11
Q ss_pred --cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHH--HHHHHHHHH
Q 009167 342 --KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTA 417 (541)
Q Consensus 342 --~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~--r~~~~~~~a 417 (541)
.......|+ .+++|.++++ ...|++++++++++.+...........++..++.++..++.+.. ..++..+..
T Consensus 229 ~~~~~~~~pdi--~t~sK~l~~G--~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~ 304 (389)
T PRK01278 229 AHEWAGVTPDI--MAVAKGIGGG--FPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMG 304 (389)
T ss_pred eecccCCCCCE--EEEehhccCC--cceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 111223455 4689999843 46788888888877765433222223456666666556655421 233344455
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcc
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~ 497 (541)
+++.+.|++... .+|.+ ....++.|.++++++.. ...+|.+.|...++.+..+
T Consensus 305 ~~l~~~l~~l~~----~~~~~---------~~~v~g~G~~~~i~~~~---~~~~~~~~l~~~GV~~~p~----------- 357 (389)
T PRK01278 305 LYLKQKLEGLVD----RFPDV---------IEEVRGKGLLLGLKCVV---PNRDLVQALRDEGLLTVGA----------- 357 (389)
T ss_pred HHHHHHHHHHHh----hCCCc---------eeeEecccEEEEEEEec---CHHHHHHHHHHCCeEEeec-----------
Confidence 555555543210 01110 01124567788988853 2456666665545543322
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhhC
Q 009167 498 MSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHAI 541 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~~i 541 (541)
..+.|||++.. ++.++.++.|+++|+++
T Consensus 358 ----------------~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 358 ----------------GDNVVRLLPPLIITEEEIDEALERLERAAESL 389 (389)
T ss_pred ----------------CCCEEEEeCCcccCHHHHHHHHHHHHHHHHhC
Confidence 14689998654 34455666666666543
No 225
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.82 E-value=5.7e-19 Score=180.53 Aligned_cols=166 Identities=19% Similarity=0.262 Sum_probs=131.3
Q ss_pred CccCCCCchhHHHHHHHHHHHhCCCcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
..--.++.....++|+.+|+++|+++++++++| ++++..++.+++++||+|++++++|.+....+. ..|+++.++
T Consensus 51 ~d~l~~~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~----~~g~~~~~v 126 (294)
T cd00615 51 LDDLLDPTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLV----LSGAVPVYL 126 (294)
T ss_pred CCCCCCCChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHH----HCCCEEEEe
Confidence 344445667789999999999999888875555 589999999999999999999999998765443 346666666
Q ss_pred CC-----------CCHHHHHHhccC-CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC------ccc
Q 009167 281 DP-----------ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL------NQK 342 (541)
Q Consensus 281 d~-----------~d~e~Le~al~~-~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~------~~~ 342 (541)
+. .|++++++++++ .++++|++++| |++|.+.|+++|+++|+++|+++|+|++++..+ ...
T Consensus 127 ~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~ 205 (294)
T cd00615 127 KPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSS 205 (294)
T ss_pred cCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcc
Confidence 32 378999999863 25899999998 699999999999999999999999999987532 223
Q ss_pred ccccCCcEEEECCccccCCCCCceEEEEEeCh
Q 009167 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSG 374 (541)
Q Consensus 343 ~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~ 374 (541)
....++|+++.|+||+++|.. .+|++..+.
T Consensus 206 ~~~~~~div~~S~hK~l~g~~--~~~~l~~~~ 235 (294)
T cd00615 206 AAMAGADIVVQSTHKTLPALT--QGSMIHVKG 235 (294)
T ss_pred hhhcCCcEEEEchhcccchHh--HHHHHHhCC
Confidence 345689999999999997653 345555443
No 226
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.82 E-value=6.5e-18 Score=182.53 Aligned_cols=284 Identities=19% Similarity=0.241 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC----C
Q 009167 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----D 284 (541)
Q Consensus 212 ~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~----d 284 (541)
..++++.+++++|.+ ..+++++|++++..++.++ ..+||+|+++++.|+.+...+.......|++++.++.+ |
T Consensus 114 ~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d 193 (447)
T PRK00451 114 IFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTD 193 (447)
T ss_pred HHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCC
Confidence 445567889999984 3456667778888888887 47999999999999887776655556678888888754 8
Q ss_pred HHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEE--eCCCCCCCcccccccCCcEEEECCccc----
Q 009167 285 MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI--DGTFATPLNQKALSLGADLVLHSATKF---- 358 (541)
Q Consensus 285 ~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIv--Dea~a~~~~~~~~~~gaDivv~S~sK~---- 358 (541)
+++|++++++ +|++|++++| |+||.+.|+++|+++|+++|+++++ |... .+....+.++++|+++.|.+|+
T Consensus 194 ~~~l~~~i~~-~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~-~g~~~~~~~~~~D~~~~s~~k~~~~~ 270 (447)
T PRK00451 194 LEALEAAVDD-DTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVS-LGLLKPPGEYGADIVVGEGQPLGIPL 270 (447)
T ss_pred HHHHHHhcCC-CeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHH-hccCCCcccCCCCEEEECCCcCCCCC
Confidence 9999999987 4999999999 8999999999999999999999998 5442 2333345577999999977775
Q ss_pred -cCCCCCceEEEEEeChHHHHHHHH-------------------------HhhhcCC-C---chH---HHHHHHHHhH--
Q 009167 359 -IGGHNDVLAGSISGSGKLVTQIRN-------------------------LHHVLGG-A---LNP---NAAYLIIRGM-- 403 (541)
Q Consensus 359 -lgg~gd~~gG~lv~~~~li~~l~~-------------------------~~~~~G~-~---~s~---~~a~l~l~~l-- 403 (541)
++|++ +|+++.++++++.+.. .+...+. . ..+ ..++..++.+
T Consensus 271 ~~~Gpg---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~ 347 (447)
T PRK00451 271 SFGGPY---LGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGP 347 (447)
T ss_pred CCCCCC---chHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCH
Confidence 55554 7888888877776310 0001110 0 011 1222112211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeec
Q 009167 404 KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 483 (541)
Q Consensus 404 ~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iav 483 (541)
+.+....++..++++++.+.|++.+.++-. ++ + +..++.+.++. ...++.+.|...++.+
T Consensus 348 ~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~----~-----------~~~~~~v~~~~---~~~~~~~~L~~~gi~~ 407 (447)
T PRK00451 348 EGLRELAEQNHQKAHYLAERLAEIGGVELF--DG----P-----------FFNEFVVRLPK---PAEEVNEALLEKGILG 407 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CC----C-----------eEEEEEEecCC---CHHHHHHHHHhcCCCC
Confidence 234455566677888888888877655321 11 0 11223344432 2355666665544322
Q ss_pred ccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 484 SFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 484 S~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
.+-. .+ |. + +. .+.+|+|++..++++.++.|.++|+++
T Consensus 408 ~~~~------~~----~~--~-------~~-~~~~rvs~~~~~t~e~i~~l~~~L~~~ 445 (447)
T PRK00451 408 GYDL------GR----YY--P-------EL-GNHLLVCVTEKRTKEDIDALVAALGEV 445 (447)
T ss_pred Cccc------cc----cc--C-------Cc-CCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 1100 00 00 0 11 358999999877888888888888753
No 227
>PRK08637 hypothetical protein; Provisional
Probab=99.82 E-value=2.7e-17 Score=174.52 Aligned_cols=290 Identities=13% Similarity=0.128 Sum_probs=170.1
Q ss_pred CCccCCCCchhHHHHHHHHHHHhC-----C--C--cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhc
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALEG-----A--E--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVL 270 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g-----~--e--~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l 270 (541)
.+.|+. ......||+.+++++. . + +.|++++|+ +++.+++.+++++||+|++++|+|+.....+.
T Consensus 37 ~~~Y~~--~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~--- 111 (388)
T PRK08637 37 IFPYAP--PQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFN--- 111 (388)
T ss_pred ccCCCC--CCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH---
Confidence 445553 2346678888887641 1 2 235566665 99999999999999999999999988653322
Q ss_pred ccCCeEEEEeCC------CCHHHHHHhcc---CCCceEEEEeCCCCCCCccccH---HHHHHHHHh-----CCCEEEEeC
Q 009167 271 PKMGITATVIDP------ADMEGLEAALN---NNNVSLFFTESPTNPFLRCVDV---KLVSDLCHK-----KGAIVCIDG 333 (541)
Q Consensus 271 ~~~Gi~v~~vd~------~d~e~Le~al~---~~~tklV~lesP~NPtG~i~dl---~~Ia~la~~-----~gi~lIvDe 333 (541)
...|.++..++. .|+++++++++ +.+++++++++||||||.+++. ++|+++|++ ++++||+||
T Consensus 112 ~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De 191 (388)
T PRK08637 112 TRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDD 191 (388)
T ss_pred HhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecc
Confidence 124666666543 26899988876 2235678888999999999984 466666664 899999999
Q ss_pred CCCCCCccc----c-c----cc-CCc--EEEECCccccCCCCCceEEEEEe------ChHHHHHHHHHh----hhcCCCc
Q 009167 334 TFATPLNQK----A-L----SL-GAD--LVLHSATKFIGGHNDVLAGSISG------SGKLVTQIRNLH----HVLGGAL 391 (541)
Q Consensus 334 a~a~~~~~~----~-~----~~-gaD--ivv~S~sK~lgg~gd~~gG~lv~------~~~li~~l~~~~----~~~G~~~ 391 (541)
+|....... + . +. +.. +++.|+||.++.+| ...||++. ++++++.+.... .......
T Consensus 192 ~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pG-lRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 270 (388)
T PRK08637 192 AYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWG-FRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNG 270 (388)
T ss_pred cchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcc-cceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCC
Confidence 986542211 1 1 11 111 23459999887666 45788874 357777665321 1111223
Q ss_pred hHHHHHHHHHhHHH--HHHHH----HHHHHHHHHHHHHHHhCCCce-EEeCCCCCCCchhhhHhhhccCcccEEEEEEcC
Q 009167 392 NPNAAYLIIRGMKT--LHLRV----QQQNSTALRMAKILEAHPKVK-RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 392 s~~~a~l~l~~l~t--l~~r~----~~~~~~a~~la~~L~~~p~v~-~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~ 464 (541)
+.....++...++. +...+ ....+....+.+.|++++... ...+| ...|.++|+.+++
T Consensus 271 s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~---------------~~~g~~~~~~l~~ 335 (388)
T PRK08637 271 PHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYP---------------FNSGYFMCLKLKG 335 (388)
T ss_pred CcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc---------------ccceEEEEecCCh
Confidence 33333333333321 11111 122233344455665542100 00111 1145678888863
Q ss_pred CHHHHHHHHHHc-cCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHHhh
Q 009167 465 DLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQALHA 540 (541)
Q Consensus 465 ~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~---edli~dL~~AL~~ 540 (541)
....+|.+.| +..++++.. ...+++||+++..+. ++.++.|.+++.+
T Consensus 336 --~~~~~l~~~l~~~~gv~~~~---------------------------~~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~ 386 (388)
T PRK08637 336 --VDAEELRVHLLEKYGIGTIA---------------------------LNETDLRIAFSCVEEEDIPELFDSIYKAIKD 386 (388)
T ss_pred --HHHHHHHHHHhhhcceEEEe---------------------------ccCCceEEEeecCCHHHHHHHHHHHHHHHHh
Confidence 3456777776 344554321 024679999987544 4455666666654
No 228
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.82 E-value=6.3e-18 Score=184.19 Aligned_cols=161 Identities=18% Similarity=0.267 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHh------CC-----C-cEEEeCCHHHHHHHHHHH-----hccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009167 211 TTVVVEEKMSALE------GA-----E-STVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 211 ~~~~Le~~LA~l~------g~-----e-~~i~~sSGs~Ai~~al~a-----ll~pGd~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
...+++++|++.+ +. + +++++++|++|+..++.+ ++.|||+|++++|.|........ +...
T Consensus 135 g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~--l~g~ 212 (527)
T PRK09275 135 RMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPE--LPRY 212 (527)
T ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHH--HcCC
Confidence 4557777777622 11 2 344444556999988876 68999999999999988654332 3334
Q ss_pred CeEEEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHh--CCCEEEEeCCCCCCCcc
Q 009167 274 GITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK--KGAIVCIDGTFATPLNQ 341 (541)
Q Consensus 274 Gi~v~~vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~--~gi~lIvDea~a~~~~~ 341 (541)
++.+..++. .|+++|++++++ ++|+|++++|+||||.+++ +++|+++|++ ++++||+||+|......
T Consensus 213 ~~~~v~v~~~~~~~f~~d~~~l~~~~~~-~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~ 291 (527)
T PRK09275 213 DLEVVHINADEENEWQYPDSELEKLRDP-SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD 291 (527)
T ss_pred CeEEEEeecCcccCCCCCHHHHHhhcCC-CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc
Confidence 555555532 267899998877 5999999999999999998 6678888854 59999999998764321
Q ss_pred --cccc--cCCcEEEECCccccCCCCCceEEEEEeChH
Q 009167 342 --KALS--LGADLVLHSATKFIGGHNDVLAGSISGSGK 375 (541)
Q Consensus 342 --~~~~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~~ 375 (541)
.... ....+++.|+||.++-.| ...|+++++++
T Consensus 292 ~~s~~~~~~~~~I~v~SfSK~f~mtG-~RlG~i~~~~~ 328 (527)
T PRK09275 292 FRSLFAVLPYNTILVYSFSKYFGATG-WRLGVIALHED 328 (527)
T ss_pred ccCHHHhCCCCEEEEeehhhhccCcH-hHHhhhhcCch
Confidence 1111 124689999999998666 34788888765
No 229
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.81 E-value=7e-18 Score=179.03 Aligned_cols=288 Identities=16% Similarity=0.217 Sum_probs=183.7
Q ss_pred cCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCC-------CEEEEcCCCCcchHHHHHhhc------
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAG-------GHIVTTTDCYRKTRIFIETVL------ 270 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pG-------d~Vlv~~~~y~~~~~~~~~~l------ 270 (541)
...|.++...+|+++|+++.|.+.+++++||++|+.++++.+...+ ++|++.++.|++........-
T Consensus 75 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 154 (396)
T PRK02627 75 SNLYYIEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQ 154 (396)
T ss_pred ccccCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCcccc
Confidence 3456789999999999999988889999999999999998665433 679999999987432211111
Q ss_pred ---ccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc-ccc---HHHHHHHHHhCCCEEEEeCCCCCCCc---
Q 009167 271 ---PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR-CVD---VKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (541)
Q Consensus 271 ---~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~-i~d---l~~Ia~la~~~gi~lIvDea~a~~~~--- 340 (541)
......+..++..|++++++++.+ ++++|++++++||+|. +.+ +++|.++|++||+++|+||+|.....
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~ 233 (396)
T PRK02627 155 EGFEPLVEGFIYVPFNDIEALKAAITD-KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK 233 (396)
T ss_pred ccCCCCCCCceEeCCCCHHHHHHhcCC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc
Confidence 000112344556689999999976 5999999999999994 444 78999999999999999999764211
Q ss_pred ---ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHH--HHHHHHH
Q 009167 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNS 415 (541)
Q Consensus 341 ---~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~--r~~~~~~ 415 (541)
........|++ +++|.+++ | ...|++++++++++.+...........++..+..+...++.+.. ..++..+
T Consensus 234 ~~~~~~~~~~pdi~--t~sK~~~~-G-~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~ 309 (396)
T PRK02627 234 LFAYQHYGIEPDIM--TLAKGLGG-G-VPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAE 309 (396)
T ss_pred eeeehhcCCCCCEE--EEcchhhC-C-cccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 11112234554 58999984 3 56788889888887775422222223456666666666654322 2333344
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccC
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
....+.+.|.+.. . .+|.. ...++.|.+++++++. ...+|.+.+...|+.+..+
T Consensus 310 ~~~~~~~~l~~~~--~--~~~~~----------~~~~~~g~~~~i~~~~---~~~~~~~~l~~~Gv~v~~~--------- 363 (396)
T PRK02627 310 VGEYLRAKLRELL--E--KYPGI----------KEVRGLGLMIGIELDR---PAAEIVKKALEKGLLINVT--------- 363 (396)
T ss_pred HHHHHHHHHHHHH--H--hCCCe----------eeeccCcEEEEEEecC---cHHHHHHHHHHCCeEEeec---------
Confidence 4455555544321 0 01111 1123467889999842 3456666665546544332
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009167 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~~ 540 (541)
..+.||+++.+ ++.++.++.|.++|++
T Consensus 364 ------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 364 ------------------GDNVLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred ------------------CCCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 13579998753 3345556666666553
No 230
>PRK07505 hypothetical protein; Provisional
Probab=99.81 E-value=4.9e-17 Score=173.40 Aligned_cols=192 Identities=20% Similarity=0.198 Sum_probs=134.8
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc----cCCC-EEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV----PAGG-HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all----~pGd-~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
++..+..++++++|++++|. +.++++||++|+..++..+. .+|+ .||+.+..|++.......... .+.++..+
T Consensus 87 ~~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~ 164 (402)
T PRK07505 87 RVRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETI 164 (402)
T ss_pred hhhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEe
Confidence 35677889999999999998 88999999999988875432 2233 355666566654432222222 34678888
Q ss_pred CCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC--------Ccccccc---cCCc
Q 009167 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--------LNQKALS---LGAD 349 (541)
Q Consensus 281 d~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~--------~~~~~~~---~gaD 349 (541)
+..|+++++++++++ ++++++++|+||+|.+.|+++|.++|+++|++||+||+++.. ....... ....
T Consensus 165 ~~~d~~~l~~~~~~~-~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~ 243 (402)
T PRK07505 165 DHNDLDALEDICKTN-KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERT 243 (402)
T ss_pred CCCCHHHHHHHHhcC-CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCe
Confidence 889999999998764 788999999999999999999999999999999999997421 1111111 1234
Q ss_pred EEEECCccccCCCCCceEEEEE-eChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHH
Q 009167 350 LVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMK 404 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv-~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~ 404 (541)
+++.|++|.+++. ||+++ .++++++.++.... .+++.+++..+..+...++
T Consensus 244 i~~~s~sK~~~~~----Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~ 297 (402)
T PRK07505 244 IIAASLGKAFGAS----GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAE 297 (402)
T ss_pred EEEEechhhhhcc----CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHH
Confidence 7788999999865 36765 47788887766433 2334454444444444443
No 231
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.80 E-value=2.6e-17 Score=175.11 Aligned_cols=213 Identities=14% Similarity=0.100 Sum_probs=136.9
Q ss_pred hhHHHHHHHHHHHhCC-------CcEE--EeCCHH-HHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcccCCeEE
Q 009167 210 PTTVVVEEKMSALEGA-------ESTV--IMASGM-SASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~-------e~~i--~~sSGs-~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v 277 (541)
....+||+++++++.. .+.+ ++|+|+ +|+.+++..+ +.|||+|++++|+|...... ++..|.++
T Consensus 69 ~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~----~~~~g~~~ 144 (396)
T PRK09257 69 EGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAI----FEAAGLEV 144 (396)
T ss_pred CCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHH----HHHcCCcE
Confidence 4567889999987521 2233 556664 9999998665 58999999999999986644 44457766
Q ss_pred EEeCC-------CCHHHHHHhccC--CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----
Q 009167 278 TVIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 278 ~~vd~-------~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~---- 341 (541)
..++. .|+++++++++. .+++++++++||||||.+++ +++|+++|++||+++|+|++|......
T Consensus 145 v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~ 224 (396)
T PRK09257 145 KTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEED 224 (396)
T ss_pred EEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHH
Confidence 66542 378899888752 23567777999999999998 557888899999999999998764321
Q ss_pred -cc---cc-c-CCcEEEECCccccCCCCCceEEEEEe---ChHHH----HHHHHHhhhcCCCchHHHHHHHHHhHH----
Q 009167 342 -KA---LS-L-GADLVLHSATKFIGGHNDVLAGSISG---SGKLV----TQIRNLHHVLGGALNPNAAYLIIRGMK---- 404 (541)
Q Consensus 342 -~~---~~-~-gaDivv~S~sK~lgg~gd~~gG~lv~---~~~li----~~l~~~~~~~G~~~s~~~a~l~l~~l~---- 404 (541)
.+ +. . ...+++.|+||.++..| .+.||++. +++.+ .+++..........+...+.++.+.++
T Consensus 225 ~~~~~~~~~~~~~vi~i~SfSK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 303 (396)
T PRK09257 225 AYGLRAFAAAGLELLVASSFSKNFGLYG-ERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPEL 303 (396)
T ss_pred HHHHHHHHhcCCcEEEEEEcCCcCcccc-ccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHH
Confidence 11 11 1 23588999999998765 45788762 44433 333332222222233433333332222
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHhC
Q 009167 405 ------TLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 405 ------tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
.+....++..++++.+.+.|+++
T Consensus 304 ~~~~~~~~~~~r~~~~~rr~~l~~~L~~~ 332 (396)
T PRK09257 304 RAEWEAELEEMRERIKAMRQLLVEALKAK 332 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12222334445666777777765
No 232
>PLN02397 aspartate transaminase
Probab=99.79 E-value=2.3e-17 Score=177.11 Aligned_cols=214 Identities=15% Similarity=0.147 Sum_probs=135.7
Q ss_pred chhHHHHHHHHHHHhCCC-------c-E----EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE
Q 009167 209 NPTTVVVEEKMSALEGAE-------S-T----VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e-------~-~----i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
.....+||+++++++... + + ++.++|+.++...+..++.|||+|++++|+|+..... ++..|.+
T Consensus 90 ~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~----~~~~g~~ 165 (423)
T PLN02397 90 IEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNI----FRDAGVP 165 (423)
T ss_pred cCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHH----HHHcCCe
Confidence 445678999999976321 1 2 2334444455566666667999999999999886533 4445666
Q ss_pred EEEeCC-------CCHHHHHHhccC--CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc--
Q 009167 277 ATVIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-- 342 (541)
Q Consensus 277 v~~vd~-------~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~-- 342 (541)
+..++. .|++.+++.+.. .+++++++.+||||||.+++ +++|+++|++||++||+||+|.......
T Consensus 166 ~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~ 245 (423)
T PLN02397 166 VRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLD 245 (423)
T ss_pred EEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchh
Confidence 666532 368877777642 25889999999999999998 5577888999999999999987654211
Q ss_pred ----c---c-ccC-CcEEEECCccccCCCCCceEEEEE--e-ChHHHHHHH----HHhhhcCCCchHHHHHHHHHhHHH-
Q 009167 343 ----A---L-SLG-ADLVLHSATKFIGGHNDVLAGSIS--G-SGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMKT- 405 (541)
Q Consensus 343 ----~---~-~~g-aDivv~S~sK~lgg~gd~~gG~lv--~-~~~li~~l~----~~~~~~G~~~s~~~a~l~l~~l~t- 405 (541)
+ . ..+ ..+++.||||.++..| .+.||++ . ++++++.+. ..........+...+.++...++.
T Consensus 246 ~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G-~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~ 324 (423)
T PLN02397 246 ADAQSVRMFVEDGHEILVAQSYAKNMGLYG-ERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDP 324 (423)
T ss_pred hhhHHHHHHHhcCCcEEEEEECcccCCCcc-ccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCH
Confidence 1 1 112 2488999999998665 3467774 3 555554433 332222222333333333332221
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHhC
Q 009167 406 ---------LHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 406 ---------l~~r~~~~~~~a~~la~~L~~~ 427 (541)
+....++..++++.+.+.|+++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 325 ELFSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2223344556677777888765
No 233
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.79 E-value=4.1e-17 Score=174.54 Aligned_cols=212 Identities=17% Similarity=0.183 Sum_probs=149.9
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-----
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----- 282 (541)
+++...+||+++++++|.+.++++++|++|+.+++.++++|||.| ++++.|..+...+ ...|.++.+++.
T Consensus 51 ~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i----~~~Ga~pv~v~i~~~~~ 125 (431)
T cd00617 51 GSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHI----EANGAVPVDLVIDEAHD 125 (431)
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHH----HhCCCEeEEEecccccc
Confidence 466788999999999999999999999999999999999999987 5777777765333 233544444432
Q ss_pred ----------CCHHHHHHhccCC---CceEEEEeCCCCCC-Ccccc---HHHHHHHHHhCCCEEEEeCCCCC--------
Q 009167 283 ----------ADMEGLEAALNNN---NVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT-------- 337 (541)
Q Consensus 283 ----------~d~e~Le~al~~~---~tklV~lesP~NPt-G~i~d---l~~Ia~la~~~gi~lIvDea~a~-------- 337 (541)
.|+++|++++++. ++++|++++|+||+ |.+++ +++|.++|++||++||.|++...
T Consensus 126 ~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~ 205 (431)
T cd00617 126 AQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKE 205 (431)
T ss_pred cccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhc
Confidence 3799999999753 38899999999998 88886 45789999999999999999331
Q ss_pred ---CCccccc-------ccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhh-----cCCCchHHHHHHHHH
Q 009167 338 ---PLNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-----LGGALNPNAAYLIIR 401 (541)
Q Consensus 338 ---~~~~~~~-------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~-----~G~~~s~~~a~l~l~ 401 (541)
++..... ....|.+..|++|-.+.+ +||++++++ +++++++..... ..+.++......+..
T Consensus 206 r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~---~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~ 282 (431)
T cd00617 206 REEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN---IGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQ 282 (431)
T ss_pred ccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc---cceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHH
Confidence 1111111 124788899999977654 478999986 588888753311 112223322222222
Q ss_pred hHHHH--HHHHHHHHHHHHHHHHHHHhC
Q 009167 402 GMKTL--HLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 402 ~l~tl--~~r~~~~~~~a~~la~~L~~~ 427 (541)
+++.. ...+++..++++++.+.|++.
T Consensus 283 gL~e~~~~~~l~~~~~~r~~l~~~L~~~ 310 (431)
T cd00617 283 GLREAVEEDYLRHRVEQVRYLGDRLDEA 310 (431)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 44332 244555556778888999876
No 234
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.79 E-value=2.2e-17 Score=179.69 Aligned_cols=145 Identities=17% Similarity=0.255 Sum_probs=107.0
Q ss_pred cEEEeCCHHHHHHHHHHH-----hccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC------------CCHHHHH
Q 009167 227 STVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------------ADMEGLE 289 (541)
Q Consensus 227 ~~i~~sSGs~Ai~~al~a-----ll~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~------------~d~e~Le 289 (541)
+++++.+|++|+..++.+ ++.|||+|+++.|.|........ +...|+++..++. .|+++++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~--l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~ 234 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPE--LPRYDFEVVRIKADEMTEDGTHTWQYPDKELE 234 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHH--HhcCCcEEEEeecccccccccccCCCCHHHHH
Confidence 344555556999988876 78999999999999988654332 3334666655542 2568898
Q ss_pred HhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhC--CCEEEEeCCCCCCCc--cccccc--CCcEEEECCccccC
Q 009167 290 AALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK--GAIVCIDGTFATPLN--QKALSL--GADLVLHSATKFIG 360 (541)
Q Consensus 290 ~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~--gi~lIvDea~a~~~~--~~~~~~--gaDivv~S~sK~lg 360 (541)
+++++ ++|+|++++|+||||.+++ +++|+++|++| +++||+||+|..... ...... ...+++.|+||+++
T Consensus 235 ~~~~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 235 KLRDP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFG 313 (521)
T ss_pred HhcCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhcc
Confidence 88776 5999999999999999998 66778889886 899999999876432 111111 24589999999998
Q ss_pred CCCCceEEEEEeChH
Q 009167 361 GHNDVLAGSISGSGK 375 (541)
Q Consensus 361 g~gd~~gG~lv~~~~ 375 (541)
..| ...|+++++++
T Consensus 314 ~~G-~RlG~i~~~~~ 327 (521)
T TIGR03801 314 ATG-WRLGTIALHKD 327 (521)
T ss_pred Cch-hhhhhhhcCch
Confidence 666 35788888654
No 235
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=1.8e-16 Score=160.12 Aligned_cols=223 Identities=17% Similarity=0.179 Sum_probs=153.2
Q ss_pred CchhHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEE
Q 009167 208 GNPTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g--------~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
+.......|+++|+++. +++++++++..+||..++.++.+||..|++++|.|+-.. ......|+++++
T Consensus 101 ps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~----~~a~~~~lEVR~ 176 (447)
T KOG0259|consen 101 PSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYD----TRAIYSGLEVRY 176 (447)
T ss_pred CccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHH----HhhhhcCceeEe
Confidence 45667788999999853 245555555569999999999999999999999997533 345566899999
Q ss_pred eCCC-------CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc-cccc----
Q 009167 280 IDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-QKAL---- 344 (541)
Q Consensus 280 vd~~-------d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~-~~~~---- 344 (541)
+|.. |++.+|+++++ +|.++++.+|+||.|.++. +++|+++|+++|+++|.||+|...++ .++.
T Consensus 177 ydlLPe~~weIDL~~veal~DE-NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg 255 (447)
T KOG0259|consen 177 YDLLPEKDWEIDLDGVEALADE-NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMG 255 (447)
T ss_pred ecccCcccceechHHHHHhhcc-CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchh
Confidence 8843 89999999988 4999999999999999997 77999999999999999999875432 1111
Q ss_pred ---ccCCcEEEECCccccCCCCCceEEEEEeCh--------HHHHHHHHHhhhcCCCchHHHHHH---HHHhHH-HHHHH
Q 009167 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSG--------KLVTQIRNLHHVLGGALNPNAAYL---IIRGMK-TLHLR 409 (541)
Q Consensus 345 ---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~--------~li~~l~~~~~~~G~~~s~~~a~l---~l~~l~-tl~~r 409 (541)
..-..+.+.+.+|-+--+|.. .||++..+ ..++.+........+...-..+++ +.+.-+ -+..+
T Consensus 256 ~fssiVPVitlggisKrW~VPGWR-lGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~ 334 (447)
T KOG0259|consen 256 KFSSIVPVITLGGISKRWIVPGWR-LGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKK 334 (447)
T ss_pred hccccCceEeecccccccccCCce-eeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHH
Confidence 112357788999977666654 67776532 233444444333222111111111 111111 12334
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCC
Q 009167 410 VQQQNSTALRMAKILEAHPKVKRVHYP 436 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~~p~v~~v~~P 436 (541)
..-...|++...++|++.|.+....-|
T Consensus 335 ~~~lk~na~l~y~~Lk~IP~l~cp~kP 361 (447)
T KOG0259|consen 335 LSFLKSNADLCYSRLKDIPCLTCPVKP 361 (447)
T ss_pred HHHHHhhHHHHHHHHhcCCCcccCcCC
Confidence 445557788888999988876544444
No 236
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.78 E-value=1.3e-16 Score=168.41 Aligned_cols=281 Identities=17% Similarity=0.150 Sum_probs=179.8
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCC-CEEEEcCCCCcchHHHHHhhccc------C---C
Q 009167 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAG-GHIVTTTDCYRKTRIFIETVLPK------M---G 274 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pG-d~Vlv~~~~y~~~~~~~~~~l~~------~---G 274 (541)
.+.++...+|.+.+++..+.+.+++++||++|+..+++.. .-+| ++|++.++.|++........... + .
T Consensus 67 ~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~ 146 (377)
T PRK02936 67 LFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLL 146 (377)
T ss_pred ccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCC
Confidence 3446777788888888777678899999999999999843 2234 67888888887642111111100 0 1
Q ss_pred eEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCc-ccc-----c
Q 009167 275 ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-QKA-----L 344 (541)
Q Consensus 275 i~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~-~~~-----~ 344 (541)
..+.+++.+|++++++.+.+ ++++|++|.+++++|.+.+ +++|.++|++||+++|+||++..... ..+ .
T Consensus 147 ~~~~~~~~~d~~~l~~~~~~-~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~ 225 (377)
T PRK02936 147 PGFTHVPFNDIKALKEVMNE-EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQF 225 (377)
T ss_pred CCceEeCCCCHHHHHHhccC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhh
Confidence 13445666789999999986 4999999999999887753 88999999999999999999753211 111 1
Q ss_pred ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHH
Q 009167 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAK 422 (541)
Q Consensus 345 ~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~ 422 (541)
....|++ +++|.+++ | ..+|++++++++.+.+...........++..+..+...++.+. ..+++..++...+.+
T Consensus 226 ~~~~di~--t~sK~l~~-G-~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~ 301 (377)
T PRK02936 226 GLDPDIV--TVAKGLGN-G-IPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQ 301 (377)
T ss_pred CCCCcEE--EEcccccC-C-CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 2234655 58999984 3 4678999999888877543222222346666666666666542 344555566666666
Q ss_pred HHHhC----CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccc
Q 009167 423 ILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 423 ~L~~~----p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
.|++. +.+..+ ++.|.++++++... ...+.+.|...++.+..+
T Consensus 302 ~L~~~~~~~~~~~~v------------------~~~g~~~~i~~~~~---~~~~~~~l~~~gv~v~~~------------ 348 (377)
T PRK02936 302 KLQEELEHLECVKNI------------------RGKGLMIGIECTEE---VAPVIEQLREEGLLVLSA------------ 348 (377)
T ss_pred HHHHHHhhCCcEEeE------------------eecceEEEEEecch---HHHHHHHHHHCCeEEecC------------
Confidence 66542 222111 23567899999642 455666665555433211
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
..+.|||++....+++.++.+.+.|+
T Consensus 349 ---------------g~~~lRi~p~~~~~~~~i~~~i~~l~ 374 (377)
T PRK02936 349 ---------------GPNVIRLLPPLVVTKEELDQAVYLLK 374 (377)
T ss_pred ---------------CCCEEEEECCcccCHHHHHHHHHHHH
Confidence 13689999754444444455444444
No 237
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.78 E-value=8.9e-17 Score=172.17 Aligned_cols=292 Identities=15% Similarity=0.033 Sum_probs=188.8
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC----cEEE--eCCHHHHHHHHHHHhc--------cCC-----CEEEEcCCCCcchHH
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE----STVI--MASGMSASTVMLLALV--------PAG-----GHIVTTTDCYRKTRI 264 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e----~~i~--~sSGs~Ai~~al~all--------~pG-----d~Vlv~~~~y~~~~~ 264 (541)
+++.. ...++.++.+|+++|.+ +.++ +++|++|+++++.+.. +.| .+|+++..+|.+...
T Consensus 75 ~~~~~-~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~k 153 (431)
T TIGR01788 75 YPQTA-EIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEK 153 (431)
T ss_pred CccHH-HHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHH
Confidence 44433 56777889999999975 3433 5777899999886542 112 379999999988664
Q ss_pred HHHhhcccCCeEEEEeCC------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC------CCEEEEe
Q 009167 265 FIETVLPKMGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCID 332 (541)
Q Consensus 265 ~~~~~l~~~Gi~v~~vd~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~------gi~lIvD 332 (541)
.. +.+|++++.++. .|+++|+++++++ |.+|.+...||.||.+.|+++|+++|+++ |+++++|
T Consensus 154 a~----~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~-t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvD 228 (431)
T TIGR01788 154 FA----RYFDVELREVPMDPGRYVIDPEQVVEAVDEN-TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVD 228 (431)
T ss_pred HH----HHcCceeEEEecCCCceeeCHHHHHHHHhhC-CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEe
Confidence 43 334666665542 2789999999874 89999999999999999999999999999 9999999
Q ss_pred CCCCCCC--------cccccccCCcEEEECCcccc-CCCCCceEEEEEeChH--HHHHHHHHhhhcC----------CCc
Q 009167 333 GTFATPL--------NQKALSLGADLVLHSATKFI-GGHNDVLAGSISGSGK--LVTQIRNLHHVLG----------GAL 391 (541)
Q Consensus 333 ea~a~~~--------~~~~~~~gaDivv~S~sK~l-gg~gd~~gG~lv~~~~--li~~l~~~~~~~G----------~~~ 391 (541)
.+|+.+. ..+....++|.++.|.||++ ++.| .|+++.+++ +.+.+.......+ ...
T Consensus 229 aaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g---~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~ 305 (431)
T TIGR01788 229 AASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPG---VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRP 305 (431)
T ss_pred cccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCC---cEEEEEeChHHcchhheecccccCCCCCCcceecCch
Confidence 9988321 11222347899999999987 6555 577766543 2222211000111 111
Q ss_pred --hHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC--
Q 009167 392 --NPNAAYLIIRGM--KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-- 465 (541)
Q Consensus 392 --s~~~a~l~l~~l--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-- 465 (541)
.....|+.++.+ ..+...+++..+.++++.+.|++.|.++-+. |. | ..++++|.+++.
T Consensus 306 g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~-~~----~-----------~~~iV~Fr~~~~~~ 369 (431)
T TIGR01788 306 ANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIIS-DG----S-----------GIPLVAFKLKDDAD 369 (431)
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEee-CC----C-----------CceEEEEEeCCCCC
Confidence 123345544333 3455667777788999999999888765442 21 1 246899999751
Q ss_pred -HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCC-CCCeEEEEec----CCCHHHHHHHHHHHHh
Q 009167 466 -LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGI-MDNLVRFSFG----VEDFEDLKADVLQALH 539 (541)
Q Consensus 466 -~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi-~~~~IRlSvG----~e~~edli~dL~~AL~ 539 (541)
......+.+.|...++.+..- ..|. ++ ..-.+|+++- .+..+++++||..++.
T Consensus 370 ~~~~~~~l~~~L~~~G~~~~~~------~~p~---------------~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~ 428 (431)
T TIGR01788 370 PGYTLYDLSHRLRERGWIVPAY------TLPK---------------NAEDIVVMRIVVREGFSRDLAELLIEDIEAALA 428 (431)
T ss_pred CCcCHHHHHHHHHHCCCcccCC------CCCC---------------ccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 123445666666545432210 0111 11 1236899884 3456788888888876
Q ss_pred hC
Q 009167 540 AI 541 (541)
Q Consensus 540 ~i 541 (541)
.+
T Consensus 429 ~~ 430 (431)
T TIGR01788 429 YL 430 (431)
T ss_pred hh
Confidence 53
No 238
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.77 E-value=1.2e-17 Score=154.33 Aligned_cols=156 Identities=23% Similarity=0.271 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHh--CCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCC-----
Q 009167 212 TVVVEEKMSALE--GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD----- 284 (541)
Q Consensus 212 ~~~Le~~LA~l~--g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d----- 284 (541)
.+++++.+++++ +.+.++++++|++|+.+++.++.++|++|+++++.|++... ..+...|.++..++.++
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ 78 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW---VAAELAGAKPVPVPVDDAGYGG 78 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh---hHHHhcCCEEEEeccCCCCccc
Confidence 468999999999 77889999999999999999998889999999999998763 23455688888776431
Q ss_pred H--HHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc----cccccCCcEEEECCccc
Q 009167 285 M--EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLGADLVLHSATKF 358 (541)
Q Consensus 285 ~--e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~----~~~~~gaDivv~S~sK~ 358 (541)
. +.+++.....+++++++++++|++|...|+++|.++|+++|+++|+|+++..+... .....++|+++.|++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~K~ 158 (170)
T cd01494 79 LDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKN 158 (170)
T ss_pred hhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEEcccc
Confidence 1 24544443336999999999999999999999999999999999999998765443 35566899999999999
Q ss_pred cCCCCCceEEEEEeC
Q 009167 359 IGGHNDVLAGSISGS 373 (541)
Q Consensus 359 lgg~gd~~gG~lv~~ 373 (541)
+++.+ +|+++.+
T Consensus 159 ~~~~~---~G~l~~~ 170 (170)
T cd01494 159 LGGEG---GGVVIVK 170 (170)
T ss_pred cCCCc---eEEEEeC
Confidence 99854 7888753
No 239
>PLN03032 serine decarboxylase; Provisional
Probab=99.77 E-value=1.3e-16 Score=167.64 Aligned_cols=225 Identities=17% Similarity=0.141 Sum_probs=164.4
Q ss_pred hcccCCCccCCCCchhHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhh
Q 009167 196 EKRRASFEYGRYGNPTTVVVEEKMSALEGAE--S--TVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV 269 (541)
Q Consensus 196 ~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e--~--~i~~sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~~~ 269 (541)
+++...|.|++......+++++.+|+++|.+ + .+++++||+|+..++.... .++++|+++..+|.+....++
T Consensus 52 gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~-- 129 (374)
T PLN03032 52 GDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR-- 129 (374)
T ss_pred CCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHH--
Confidence 4555667888888888999999999999973 3 3888888999998887543 355699999999999775542
Q ss_pred cccCCeEEEEe--CC---CCHHHHHHhccCC--CceEEEEeCCCCCCCccccHHHHHHHHHhCC-----CEEEEeCCCCC
Q 009167 270 LPKMGITATVI--DP---ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-----AIVCIDGTFAT 337 (541)
Q Consensus 270 l~~~Gi~v~~v--d~---~d~e~Le~al~~~--~tklV~lesP~NPtG~i~dl~~Ia~la~~~g-----i~lIvDea~a~ 337 (541)
.+|+.++.+ +. .|+++|+++++++ ++.+|++...+|++|.+.|+++|+++|+++| +++++|.+++.
T Consensus 130 --~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg 207 (374)
T PLN03032 130 --MYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFG 207 (374)
T ss_pred --HcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchh
Confidence 233333333 32 3899999999753 3778888889999999999999999999996 58999999875
Q ss_pred CCc-cc------ccccCCcEEEECCccccC-CCCCceEEEEEeChHHHHHHHHHhh--------hcCCC--chHHHHHHH
Q 009167 338 PLN-QK------ALSLGADLVLHSATKFIG-GHNDVLAGSISGSGKLVTQIRNLHH--------VLGGA--LNPNAAYLI 399 (541)
Q Consensus 338 ~~~-~~------~~~~gaDivv~S~sK~lg-g~gd~~gG~lv~~~~li~~l~~~~~--------~~G~~--~s~~~a~l~ 399 (541)
+.. .. ....++|.++.|.||+++ +.+ .|+++.+++.++.+..... ..|.. ......|..
T Consensus 208 ~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g---~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~ 284 (374)
T PLN03032 208 LMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMP---CGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYT 284 (374)
T ss_pred hhhhccCCCcccCCCcCCcEEEECcccccCCCcC---eEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHH
Confidence 422 10 122468999999999998 555 6888777766654432111 12222 224555655
Q ss_pred HH--hHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 400 IR--GMKTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 400 l~--~l~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
++ +.+.+..++++..++++++.+.|++.
T Consensus 285 l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~ 314 (374)
T PLN03032 285 LRRKGYRGIKRDVQHCMRNAHYLKDRLTEA 314 (374)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44 44667788889999999999999875
No 240
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=4.5e-17 Score=168.10 Aligned_cols=290 Identities=17% Similarity=0.211 Sum_probs=195.7
Q ss_pred CccCCCCchhHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHhcc----C-CCEEEEcCCCCcc-hHHH--------H
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVP----A-GGHIVTTTDCYRK-TRIF--------I 266 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g-~e~~i~~sSGs~Ai~~al~all~----p-Gd~Vlv~~~~y~~-~~~~--------~ 266 (541)
|.-.-|.++...+|.++|+++.+ .+.+++++||+||++.++...-+ + ..+||.....|++ |+.. +
T Consensus 76 h~sn~~~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky 155 (404)
T COG4992 76 HVSNLFYNEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKY 155 (404)
T ss_pred hcccccCChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhh
Confidence 44555778999999999999997 78899999999999999975321 1 2389998888887 1111 1
Q ss_pred HhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCC----C
Q 009167 267 ETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----P 338 (541)
Q Consensus 267 ~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~----~ 338 (541)
+..+..+--.+++++.+|++++++++++ +|.+|++|.++...|.+.+ ++++.++|++||+++|.||++.. +
T Consensus 156 ~~~F~Pl~~g~~~vpfnDi~al~~ai~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG 234 (404)
T COG4992 156 RKGFGPLLPGFRHVPFNDIEALEAAIDE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG 234 (404)
T ss_pred ccCCCCCCCCceecCCCCHHHHHHHhcc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccc
Confidence 1222222224667788999999999998 5999999999999999887 77999999999999999999653 1
Q ss_pred --CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH--hhhcCCCchHHHHHHHHHhHHHHH--HHHHH
Q 009167 339 --LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLGGALNPNAAYLIIRGMKTLH--LRVQQ 412 (541)
Q Consensus 339 --~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~--~~~~G~~~s~~~a~l~l~~l~tl~--~r~~~ 412 (541)
+.........||++ +.|.+||+ ...|+++.++.+.+.+... ...+|+ +|+++..+...++.+. .-+++
T Consensus 235 k~fA~e~~gV~PDI~t--laK~LgGG--~PigA~la~~~~~~~~~~G~HgSTfGG--NpLacAv~~a~l~~l~~e~ll~~ 308 (404)
T COG4992 235 KLFAYEHYGVEPDILT--LAKALGGG--FPIGAMLATEEIASAFTPGDHGSTFGG--NPLACAVALAVLEVLLEEGLLEN 308 (404)
T ss_pred hHHHHHHhCCCCCEEE--eeccccCC--ccceeeEEchhhhhcCCCCcccCCCCc--CHHHHHHHHHHHHHHcchhHHHH
Confidence 11223344568877 88999876 5677777775555544322 223444 5777777666666553 22333
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCccccc
Q 009167 413 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 492 (541)
Q Consensus 413 ~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~ 492 (541)
..+...++.+.|++.. ..||- -+..+|.|.|+.+++.... .+..++..+...++-+...
T Consensus 309 v~~~g~~~~~~L~~l~----~~~~~----------v~~vRG~GLmiGiel~~~~-~a~~~~~~~~~~gvL~~~a------ 367 (404)
T COG4992 309 VREKGEYLLQRLRELK----RRYPL----------VKEVRGRGLMIGIELKEPY-RARDIVRALREEGVLVLPA------ 367 (404)
T ss_pred HHHHHHHHHHHHHHHh----hcCCc----------eeeeecceeEEEEEecCcc-cHHHHHHHHHHCCeEEecC------
Confidence 3344444555554421 12221 1334788999999997532 4667777776655433221
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhh
Q 009167 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALHA 540 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG----~e~~edli~dL~~AL~~ 540 (541)
.++.|||... .|+.++.++.|+++|+.
T Consensus 368 ---------------------~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~ 398 (404)
T COG4992 368 ---------------------GPNVIRFLPPLVITEEEIDEALDALERALAA 398 (404)
T ss_pred ---------------------CCCeEEecCCccCCHHHHHHHHHHHHHHHHH
Confidence 2456777644 46777788888888764
No 241
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.77 E-value=3.9e-16 Score=166.27 Aligned_cols=257 Identities=14% Similarity=0.156 Sum_probs=164.2
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcchHHHHHhhc-------
Q 009167 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVL------- 270 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all--------~pGd~Vlv~~~~y~~~~~~~~~~l------- 270 (541)
.+.++...+|+++|+++.+.+.+++++||++|+..+++... ...++||..+..|++........-
T Consensus 73 ~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~ 152 (397)
T TIGR03246 73 GYTNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQ 152 (397)
T ss_pred ccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccc
Confidence 35678889999999999988899999999999999998541 123578888877877432111110
Q ss_pred --ccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccc-c---HHHHHHHHHhCCCEEEEeCCCCCC----C-
Q 009167 271 --PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP----L- 339 (541)
Q Consensus 271 --~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~-d---l~~Ia~la~~~gi~lIvDea~a~~----~- 339 (541)
......+..++.+|++++++.+.+ ++++|++|.++++.|.+. | +++|.++|++||+++|+||++... .
T Consensus 153 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~ 231 (397)
T TIGR03246 153 GFAPLPGGIKHAPYNDLAAAKALISD-KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGEL 231 (397)
T ss_pred CCCCCCCceEEeCCCCHHHHHHHhcc-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccc
Confidence 011123456777899999999976 499999998777777654 3 889999999999999999996321 1
Q ss_pred -cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--HHHHHHHHH
Q 009167 340 -NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 416 (541)
Q Consensus 340 -~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~~ 416 (541)
........+|++ +++|.+++ | ...|++++++++++.+...........+|..+..++..++.+. ...++..++
T Consensus 232 ~a~~~~gv~pDi~--t~~K~lgg-G-~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~ 307 (397)
T TIGR03246 232 YAYMHYGVTPDIL--TSAKALGG-G-FPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQR 307 (397)
T ss_pred hhhhhcCCCCCEE--EeehhhhC-C-cceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 111122345666 58999974 3 4678888898888777532211111134555555555554432 233444455
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHHHHccCcCe
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYI 481 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~~~~i 481 (541)
.+++.+.|++... .++.. ...+|.|.++.+++... ......|...|...++
T Consensus 308 ~~~l~~~L~~l~~----~~~~~----------~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv 359 (397)
T TIGR03246 308 HDLFVDGLEKINA----RYNVF----------SEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGV 359 (397)
T ss_pred HHHHHHHHHHHHh----cCCCe----------EeeecCceEEEEEEcCchhhHHHHHHHHHHHCCe
Confidence 6666666654311 11110 11245688889988532 2345677777665554
No 242
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.77 E-value=3.2e-16 Score=167.19 Aligned_cols=256 Identities=14% Similarity=0.189 Sum_probs=164.7
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcchHH-HHH--------hhc
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRI-FIE--------TVL 270 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all--------~pGd~Vlv~~~~y~~~~~-~~~--------~~l 270 (541)
.++...+|+++|+++.+.+.+++++||++|+..+++... ...+.|+..+..|++... .+. ..+
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~ 159 (403)
T PRK05093 80 TNEPALRLAKKLIDATFAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGF 159 (403)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcC
Confidence 456678999999999887899999999999999987431 123578888888877432 111 011
Q ss_pred ccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccc-c----HHHHHHHHHhCCCEEEEeCCCCCCCc-ccc-
Q 009167 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D----VKLVSDLCHKKGAIVCIDGTFATPLN-QKA- 343 (541)
Q Consensus 271 ~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~-d----l~~Ia~la~~~gi~lIvDea~a~~~~-~~~- 343 (541)
......+..++.+|++++++.+.+ ++++|++| |.|++|.+. + +++|.++|++||+++|+||+|..... ...
T Consensus 160 ~~~~~~~~~~~~~d~~~l~~~l~~-~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~ 237 (403)
T PRK05093 160 GPKPADITHVPFNDLAAVKAVIDD-HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF 237 (403)
T ss_pred CCCCCCcEEeCCCCHHHHHHHhcC-CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch
Confidence 112234566778899999999976 49999998 666776554 3 88999999999999999999763211 111
Q ss_pred ----cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--HHHHHHHHHH
Q 009167 344 ----LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTA 417 (541)
Q Consensus 344 ----~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~~a 417 (541)
.....| +.|++|.+++ | ...|++++++++++.+...........++..++.++..++.+. ...++..++.
T Consensus 238 ~~~~~~~~pd--i~s~sK~l~~-G-~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~ 313 (403)
T PRK05093 238 AYMHYGVTPD--ILTSAKALGG-G-FPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARR 313 (403)
T ss_pred hhhhcCCCCC--EEEecccccC-C-cceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 122345 4578999984 3 5689999999988877642222222345556655555554432 2334455566
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-HHHHHHHHHccCcCeec
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAP 483 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-~~~~~~l~~L~~~~iav 483 (541)
+.+.+.|++... .++.. ...++.|.+++++++.+. ....+|.+.|...++.+
T Consensus 314 ~~l~~~L~~~~~----~~~~~----------~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v 366 (403)
T PRK05093 314 QRFVDGLQKINQ----KYGVF----------SEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMV 366 (403)
T ss_pred HHHHHHHHHHHh----hCCCe----------EeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEE
Confidence 667777765321 01100 011346778999986431 24567777765555443
No 243
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.77 E-value=1.2e-16 Score=174.24 Aligned_cols=165 Identities=15% Similarity=0.234 Sum_probs=123.5
Q ss_pred hhHHHHHHHHHHHhCCCcE-EEeCCHHHHHHHH---HH-HhccCCC----EEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 210 PTTVVVEEKMSALEGAEST-VIMASGMSASTVM---LL-ALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e~~-i~~sSGs~Ai~~a---l~-all~pGd----~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
....++++.+++++|.+.+ +..++|+.+.... ++ .+.++|| +|+++++.|+.+... +...|++++.+
T Consensus 113 el~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~----~~~~G~~vv~v 188 (481)
T PRK04366 113 ELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPAS----AAMAGFKVVEI 188 (481)
T ss_pred HHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHH----HHHcCCEEEEe
Confidence 3466788999999998654 4445666443322 22 3456776 999999999886643 34568888877
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCCcc-ccHHHHHHHHHhCCCEEEEeCCCCCC-C-cccccccCCcEEE
Q 009167 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP-L-NQKALSLGADLVL 352 (541)
Q Consensus 281 d~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i-~dl~~Ia~la~~~gi~lIvDea~a~~-~-~~~~~~~gaDivv 352 (541)
+. .|+++|++++++ +|++|++++|| |+|.+ .|+++|+++|+++|+++++|+++... + ..++.++|+|+++
T Consensus 189 ~~~~~~~~D~e~L~~~i~~-~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~ 266 (481)
T PRK04366 189 PSNEDGLVDLEALKAAVGE-DTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVH 266 (481)
T ss_pred ecCCCCCcCHHHHHhhccc-CCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEE
Confidence 54 378999999987 49999999988 99987 58999999999999999999997532 1 2366788999999
Q ss_pred ECCccccCCC---CCceEEEEEeChHHHHHH
Q 009167 353 HSATKFIGGH---NDVLAGSISGSGKLVTQI 380 (541)
Q Consensus 353 ~S~sK~lgg~---gd~~gG~lv~~~~li~~l 380 (541)
.|+||+++++ |..-+|+++.++++.+.+
T Consensus 267 ~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~l 297 (481)
T PRK04366 267 LNLHKTFSTPHGGGGPGSGPVGVKEELAPFL 297 (481)
T ss_pred EechhhcCCCCCCCCCCeeeeeehhhhHhhC
Confidence 9999998744 112367888877766655
No 244
>PRK02769 histidine decarboxylase; Provisional
Probab=99.75 E-value=3.2e-16 Score=165.62 Aligned_cols=234 Identities=18% Similarity=0.144 Sum_probs=160.8
Q ss_pred ccCCCccCCCCchhHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc
Q 009167 198 RRASFEYGRYGNPTTVVVEEKMSALEGAE--S--TVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP 271 (541)
Q Consensus 198 ~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e--~--~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l~ 271 (541)
....+.|++......+++++.+|+++|.+ + .+++++|++++..++... +.++++|++++.+|.+....++ .+.
T Consensus 53 p~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~-~lg 131 (380)
T PRK02769 53 PYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIAR-LLR 131 (380)
T ss_pred ccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHH-HcC
Confidence 34455666666667778899999999973 3 467778889987776543 3578999999999999775553 333
Q ss_pred cCCeEEEEeC--CCCHHHHHHhccCC--CceEEEEeCCCCCCCccccHHHHHHHHHhCC---CEEEEeCCCCCCCc----
Q 009167 272 KMGITATVID--PADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCIDGTFATPLN---- 340 (541)
Q Consensus 272 ~~Gi~v~~vd--~~d~e~Le~al~~~--~tklV~lesP~NPtG~i~dl~~Ia~la~~~g---i~lIvDea~a~~~~---- 340 (541)
..+..+...+ ..|+++|+++++++ +|.+|++..++|++|.+.|+++|+++|+++| +++++|.+++.+..
T Consensus 132 ~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~ 211 (380)
T PRK02769 132 IKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVN 211 (380)
T ss_pred CCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccC
Confidence 2233333222 23899999998763 3889999999999999999999999999998 69999999876432
Q ss_pred ----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh--------hhcCCC--chHHHHHHHHHhH--H
Q 009167 341 ----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--------HVLGGA--LNPNAAYLIIRGM--K 404 (541)
Q Consensus 341 ----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--------~~~G~~--~s~~~a~l~l~~l--~ 404 (541)
.+... ++|.++.|.||+++++. ..|+++.+++..+.+.... ...|+. ......|.+++.+ +
T Consensus 212 ~~~~~d~~~-~vDsis~s~HK~~~~P~--g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~ 288 (380)
T PRK02769 212 NPPPFSFAD-GIDSIAISGHKFIGSPM--PCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSK 288 (380)
T ss_pred ccccCCccC-CCCEEEECCcccCCCCC--CcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHH
Confidence 22223 89999999999998443 2677777776665542110 012222 1234445544433 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCC
Q 009167 405 TLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (541)
Q Consensus 405 tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P 436 (541)
.+..+.++..+.++++.+.|++. ++..+..|
T Consensus 289 G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p 319 (380)
T PRK02769 289 GLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNP 319 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCC
Confidence 34556677778888899988764 44444444
No 245
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.75 E-value=7.7e-16 Score=164.15 Aligned_cols=287 Identities=18% Similarity=0.184 Sum_probs=183.4
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc---------cC-CCEEEEcCCCCcch-HHHHHhhc-----
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PA-GGHIVTTTDCYRKT-RIFIETVL----- 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all---------~p-Gd~Vlv~~~~y~~~-~~~~~~~l----- 270 (541)
+..+...+|+++|++++|.+.+++++||++|+..++.... .+ .+.|+.....|++. ...+...-
T Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~ 155 (401)
T TIGR01885 76 FYNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSR 155 (401)
T ss_pred cCCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccc
Confidence 3567789999999999998889999999999999998642 13 45788888888863 33221100
Q ss_pred ccCC---eEEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC-Cc
Q 009167 271 PKMG---ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LN 340 (541)
Q Consensus 271 ~~~G---i~v~~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~-~~ 340 (541)
..++ ..+..++..|+++|+++++. .++.+|++|.+.+++|.+.| +++|.++|++||+++|+||++... ..
T Consensus 156 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~ 235 (401)
T TIGR01885 156 TNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRT 235 (401)
T ss_pred cccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc
Confidence 0112 23455667789999988852 24789999999999999987 999999999999999999996321 11
Q ss_pred -----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHH--HHHHH
Q 009167 341 -----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQ 413 (541)
Q Consensus 341 -----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~--r~~~~ 413 (541)
........|+++ ++|.+++++ ...|++++++++++.++..........+|..+..+...++.+.. ..++.
T Consensus 236 G~~~~~~~~~~~~di~~--~gK~l~~g~-~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~ 312 (401)
T TIGR01885 236 GKLLCVDHENVKPDIVL--LGKALSGGV-YPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENA 312 (401)
T ss_pred chhhHHhhcCCCCCEEE--eeccccCCC-CCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHH
Confidence 111234568776 569998643 24678888888888775422211112245555555556655432 22344
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH--HHHHHHHHHccCcCeecccCCcccc
Q 009167 414 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 414 ~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~--~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
.+..+++.+.|++.+. +-. ...+|.|.|+.+.++.+. ....++.+.|...|+.+..+
T Consensus 313 ~~~~~~~~~~L~~l~~------~~~----------~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~----- 371 (401)
T TIGR01885 313 EKLGEIFRDQLKKLPK------PII----------TEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPT----- 371 (401)
T ss_pred HHHHHHHHHHHHhccC------Cce----------eEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEec-----
Confidence 4455666666665421 100 011346888888886431 24667777776556544221
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
.++.|||+..+..+++.++.+.++|+
T Consensus 372 ----------------------~~~~lRi~p~l~~t~~~i~~~l~~l~ 397 (401)
T TIGR01885 372 ----------------------HGNIIRLAPPLVITEEQLDEGLEIIK 397 (401)
T ss_pred ----------------------CCCEEEEeCCccCCHHHHHHHHHHHH
Confidence 24679999765555555555555444
No 246
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.75 E-value=9.5e-16 Score=163.77 Aligned_cols=258 Identities=13% Similarity=0.144 Sum_probs=165.2
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcchHHHHHhhcc------
Q 009167 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVLP------ 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all--------~pGd~Vlv~~~~y~~~~~~~~~~l~------ 271 (541)
.+.++...+|+++|+++.+.+.+++++||++|+..+++... ..+.+|+..+..|++........-.
T Consensus 77 ~~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~ 156 (406)
T PRK12381 77 GYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQ 156 (406)
T ss_pred ccCCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCccccc
Confidence 45677788999999999888889999999999999998642 2346888888889885322111100
Q ss_pred ---cCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccc-----cHHHHHHHHHhCCCEEEEeCCCCCC-Ccc-
Q 009167 272 ---KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATP-LNQ- 341 (541)
Q Consensus 272 ---~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~-----dl~~Ia~la~~~gi~lIvDea~a~~-~~~- 341 (541)
..--.+..++..|++++++.+++ ++++|++| |.|++|-+. .+++|.++|++||+++|+||++... ...
T Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~ 234 (406)
T PRK12381 157 DFAPLPPDIRHAAYNDLNSASALIDD-QTCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGE 234 (406)
T ss_pred CCCCCCCCeeEeCCCCHHHHHHhccC-CeeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcc
Confidence 00012344566789999999976 48999996 777887543 2779999999999999999997321 111
Q ss_pred ----cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--HHHHHHHH
Q 009167 342 ----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (541)
Q Consensus 342 ----~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~ 415 (541)
.......|+ .+++|.++++ ...|++++++++++.+...........+|..+..+...++.+. ...++..+
T Consensus 235 ~~~~~~~~v~pDi--~t~sK~l~gG--~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~ 310 (406)
T PRK12381 235 LYAYMHYGVTPDV--LTTAKALGGG--FPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQ 310 (406)
T ss_pred hhhhHhhCCCCCE--EEehhhhhCC--CceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 112223565 4789999843 4678888999988877543222112335666655555555442 22344445
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-HHHHHHHHHccCcCeec
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAP 483 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-~~~~~~l~~L~~~~iav 483 (541)
+.+.+.+.|++... .++.. .+.+|.|.+++++++... .....+.+.+...++.+
T Consensus 311 ~~~~l~~~L~~l~~----~~~~~----------~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v 365 (406)
T PRK12381 311 RHDWFVERLNTINA----RYGLF----------SEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMV 365 (406)
T ss_pred HHHHHHHHHHHHHh----hCCCE----------EEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEE
Confidence 55666666654310 01100 112457889999986431 24566667776556543
No 247
>PLN02624 ornithine-delta-aminotransferase
Probab=99.75 E-value=5.7e-16 Score=168.50 Aligned_cols=264 Identities=14% Similarity=0.176 Sum_probs=164.3
Q ss_pred cCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc---------CCC-EEEEcCCCCcchHHHHHhhc---
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AGG-HIVTTTDCYRKTRIFIETVL--- 270 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~---------pGd-~Vlv~~~~y~~~~~~~~~~l--- 270 (541)
..++.++...+|+++|+++.+.+.+++++||++|+..+++.... ++. .|+.....|++........-
T Consensus 111 ~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~ 190 (474)
T PLN02624 111 SRAFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDN 190 (474)
T ss_pred ccccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCc
Confidence 34567888899999999999888899999999999999873321 133 57777777877421111110
Q ss_pred ------ccCCeEEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC
Q 009167 271 ------PKMGITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP 338 (541)
Q Consensus 271 ------~~~Gi~v~~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~ 338 (541)
......+.+++..|++.+++.++. .++++|++|.++|++|.++| +++|.++|++||+++|+||++...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~ 270 (474)
T PLN02624 191 EATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGL 270 (474)
T ss_pred cccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc
Confidence 001112445677789999988852 25899999999999999998 999999999999999999997631
Q ss_pred -C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHH--HH
Q 009167 339 -L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RV 410 (541)
Q Consensus 339 -~-----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~--r~ 410 (541)
. ..+......|+++ ++|.+++++ ...|++++++++++.+...........++..+..+...++.+.. ..
T Consensus 271 GrtG~~~a~~~~~i~pDiv~--lsK~lggG~-~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~ 347 (474)
T PLN02624 271 ARTGKMLACDWEEVRPDVVI--LGKALGGGV-IPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLA 347 (474)
T ss_pred CcCcchhhHHhcCCCCCEEE--ecccccCCC-CcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHH
Confidence 1 1111233467777 679998653 34677788888777664322111112355555555556655432 11
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC---HHHHHHHHHHccCcCeec
Q 009167 411 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPYIAP 483 (541)
Q Consensus 411 ~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~---~~~~~~~l~~L~~~~iav 483 (541)
++..+....+.+.|++... .+|.. ....+|.|.++.++++.. ......+.+.|...++.+
T Consensus 348 ~~~~~~~~~l~~~L~~l~~----~~~~~---------i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v 410 (474)
T PLN02624 348 ERSAKLGQELRDQLQKIQK----QFPKL---------IKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLA 410 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH----hCCCc---------eEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEE
Confidence 2222333444444433100 01100 011235688888888532 244566777776556544
No 248
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=1.6e-16 Score=152.98 Aligned_cols=289 Identities=14% Similarity=0.157 Sum_probs=194.3
Q ss_pred CCCchhHHHHHHHHHHHhCC-CcEEEeCCHH-HHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~-e~~i~~sSGs-~Ai~~al~all~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
+|++|...+++..++.--+- .+.|+++-|+ +.|.++++..+-|| ++|+...|+|.... --+.-.+++|..++.
T Consensus 65 ~~~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~----v~A~iNd~eVvkvpl 140 (375)
T KOG0633|consen 65 VYPDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYV----VDAAINDAEVVKVPL 140 (375)
T ss_pred ccCCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEE----EEeecCCceEEEecC
Confidence 34455555666666654443 4678899898 89999999999999 89999999997631 223445777777753
Q ss_pred C-----CHHHHHHhccCC-CceEEEEeCCCCCCCccccHHHHHHHHHhC-CCEEEEeCCCCCCCcc-c----ccccCCcE
Q 009167 283 A-----DMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQ-K----ALSLGADL 350 (541)
Q Consensus 283 ~-----d~e~Le~al~~~-~tklV~lesP~NPtG~i~dl~~Ia~la~~~-gi~lIvDea~a~~~~~-~----~~~~gaDi 350 (541)
. +.+++.+.++.+ ++|++|+++|+||||.++..+.|.++.+-. +.++|+||+|..+... . ..++..-+
T Consensus 141 ~pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLi 220 (375)
T KOG0633|consen 141 NPDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLI 220 (375)
T ss_pred CCCccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCcee
Confidence 2 788888888644 689999999999999999999888888653 7899999997654331 1 12334458
Q ss_pred EEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchH-HHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP-NAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 351 vv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~-~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
++.++||.+|-.| +..|+-..+.++++.+......+...... ..+..++. .++.++.....+.+.+.+|...|.+.
T Consensus 221 vlqTlSKsfGLAG-iRvG~~~~~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v 299 (375)
T KOG0633|consen 221 VLQTLSKSFGLAG-IRVGYGAFPLSIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEV 299 (375)
T ss_pred ehhhhhhhcCcce-eEeecccccHHHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcC
Confidence 8999999998554 45666666778888777766555533322 22222222 44556666666667788888888887
Q ss_pred CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHH-HHHccCcCeecccCCcccccccCccccccCCCH
Q 009167 428 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKF-IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 505 (541)
Q Consensus 428 p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~-l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~ 505 (541)
|.+.. ||+- ...+++-+++.++ ...+.++ .+.+...++-+.+-+.+-
T Consensus 300 ~~~~~--~~gg--------------~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~--------------- 348 (375)
T KOG0633|consen 300 PFLND--YPGG--------------SDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEE--------------- 348 (375)
T ss_pred ccccC--CCCc--------------ccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCcc---------------
Confidence 76654 4431 1357888888754 2333333 333445566555544321
Q ss_pred HHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHH
Q 009167 506 SERLKYGIMDNLVRFSFGVE-DFEDLKADVLQA 537 (541)
Q Consensus 506 ~~~~~~gi~~~~IRlSvG~e-~~edli~dL~~A 537 (541)
| -.|++|+++|.+ +..-|++-|++.
T Consensus 349 ------~-c~G~lRitvGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 349 ------G-CKGYLRITVGTPEENTVLMKCLKQF 374 (375)
T ss_pred ------c-cceeEEEEcCCcccchHHHHHHHhh
Confidence 1 258999999964 455677766654
No 249
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.73 E-value=1.1e-15 Score=163.89 Aligned_cols=245 Identities=18% Similarity=0.126 Sum_probs=162.0
Q ss_pred HHHHHHHhCCCcE-EEeCCHHHHHHHHHHHhccC-------------------------------CCEEEEcCCCCcchH
Q 009167 216 EEKMSALEGAEST-VIMASGMSASTVMLLALVPA-------------------------------GGHIVTTTDCYRKTR 263 (541)
Q Consensus 216 e~~LA~l~g~e~~-i~~sSGs~Ai~~al~all~p-------------------------------Gd~Vlv~~~~y~~~~ 263 (541)
.++..+++|++.+ +=.-||+.|+..++.++++| ||+|+..+..+++..
T Consensus 101 ~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHl 180 (493)
T PRK13580 101 AEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHL 180 (493)
T ss_pred HHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCee
Confidence 4555668888754 55579999999999999987 899999888776632
Q ss_pred HHH--HhhcccCCeEEEE--eC----CCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCC
Q 009167 264 IFI--ETVLPKMGITATV--ID----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 264 ~~~--~~~l~~~Gi~v~~--vd----~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~ 335 (541)
..- ..... ....+.. ++ ..|.+++++.+++. +++|++...+|- +...|+++|.++|+++|+++++|+++
T Consensus 181 thg~~~n~~~-~~~~~~~y~vd~~~g~iD~d~l~~~~~~~-~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH 257 (493)
T PRK13580 181 THGFRPNISG-KMFHQRSYGVDPDTGLLDYDEIAALAREF-KPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAH 257 (493)
T ss_pred ecCcccchhh-heeeeEecccCcccCccCHHHHHHHHhhc-CCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECch
Confidence 100 00000 0011111 12 23889999999875 677777788877 55889999999999999999999997
Q ss_pred CCCCcc--------cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-hhcCCCchHHHHHHHHHhHHH-
Q 009167 336 ATPLNQ--------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGALNPNAAYLIIRGMKT- 405 (541)
Q Consensus 336 a~~~~~--------~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-~~~G~~~s~~~a~l~l~~l~t- 405 (541)
+.++.. .+. .++|+++.|+||++.|+. ||++++++++++.+.... ..+|+.+.+..+..+....+.
T Consensus 258 ~~Gligg~~~~~~~~~~-~~~D~vtgT~hKaL~GP~---GG~I~~~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~ 333 (493)
T PRK13580 258 FAGLVAGKVFTGDEDPV-PHADIVTTTTHKTLRGPR---GGLVLAKKEYADAVDKGCPLVLGGPLPHVMAAKAVALAEAR 333 (493)
T ss_pred hhceeccccchhhcCCC-CCCcEEEeCChhhccCCC---eEEEEecHHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHh
Confidence 765431 232 368999999999996553 799999999888875332 345666666544443322221
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCee
Q 009167 406 ---LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 482 (541)
Q Consensus 406 ---l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~ia 482 (541)
...+.++..+|++.+++.|.+... . +...+- -..++.+.+.+.......+-+.|...+|-
T Consensus 334 ~~ef~~y~~~l~~Na~~La~~L~~~G~-~-vv~ggT---------------dshIV~V~lg~~~~~g~~a~~~L~e~GI~ 396 (493)
T PRK13580 334 TPEFQKYAQQVVDNARALAEGFLKRGA-R-LVTGGT---------------DNHLVLIDVTSFGLTGRQAESALLDAGIV 396 (493)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhcCC-C-ccCCCC---------------CCCEEEEEeCCHHHHHHHHHHHHHHCCeE
Confidence 234677888999999999987532 1 111111 23588999864322333444566655654
Q ss_pred cc
Q 009167 483 PS 484 (541)
Q Consensus 483 vS 484 (541)
++
T Consensus 397 vn 398 (493)
T PRK13580 397 TN 398 (493)
T ss_pred Ec
Confidence 44
No 250
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.73 E-value=6.4e-16 Score=163.60 Aligned_cols=279 Identities=14% Similarity=0.036 Sum_probs=175.7
Q ss_pred hhHHHHHHHHHHHhCC-C--cEEEeC-CHHHHHHHHHHHhccC-CCEEEEcCCCCcchHHHHHhhcccCCe-EEEEeCCC
Q 009167 210 PTTVVVEEKMSALEGA-E--STVIMA-SGMSASTVMLLALVPA-GGHIVTTTDCYRKTRIFIETVLPKMGI-TATVIDPA 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~-e--~~i~~s-SGs~Ai~~al~all~p-Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi-~v~~vd~~ 283 (541)
...++.++.|++++|. + ++++++ ||+.+++.++.+++++ ++.|++ ...|+.. +.....+++|+ +++.+...
T Consensus 48 ~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~--~~~~~~~~~g~~~v~~~~~~ 124 (378)
T PRK03080 48 ALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSK--WATDVVKQLKLEDPRVLEAD 124 (378)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHH--HHHHHHhhcCCCCceEeccC
Confidence 4567889999999996 2 466675 8899999999999875 455555 4566652 23223356677 77776532
Q ss_pred -----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCcc
Q 009167 284 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATK 357 (541)
Q Consensus 284 -----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~sK 357 (541)
|+++ ++. +++|.+.+..|.||.+.|+++|++ |++|+++++|.+++.+. +.+..+ +|+++.|.+|
T Consensus 125 ~g~~~d~~~----i~~--~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K 194 (378)
T PRK03080 125 YGSLPDLSA----VDF--DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK--LDVYTFSWQK 194 (378)
T ss_pred CCCCCCHhh----cCC--CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH--CcEEEEehhh
Confidence 3443 332 567888899999999999999999 88999999999987653 344433 7999999999
Q ss_pred ccCC-CCCceEEEEEeChHHHHHHHHHhh-------------------hc-CC---CchHHHHHHHHHhHHHH------H
Q 009167 358 FIGG-HNDVLAGSISGSGKLVTQIRNLHH-------------------VL-GG---ALNPNAAYLIIRGMKTL------H 407 (541)
Q Consensus 358 ~lgg-~gd~~gG~lv~~~~li~~l~~~~~-------------------~~-G~---~~s~~~a~l~l~~l~tl------~ 407 (541)
++++ +| .|+++.+++.++++..... .+ ++ +++....+.+..+++.+ +
T Consensus 195 ~l~~P~G---~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e 271 (378)
T PRK03080 195 VLGGEGG---HGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLD 271 (378)
T ss_pred hCCCCCc---eEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHH
Confidence 9977 44 6899999888776653110 00 11 12222222223334333 2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHHHHccCcCeecccC
Q 009167 408 LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 408 ~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~~~~iavS~G 486 (541)
.+.++..+.++.+.++|++.+.+. +..+ .+.+ ..+.+++|.+++. ......++..+...++.+..|
T Consensus 272 ~i~~r~~~l~~~l~~~l~~~~~~~-~~~~----~~~~--------~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g 338 (378)
T PRK03080 272 ALIARTAANASVLYDWAEKTPWAT-PLVA----DPAT--------RSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIE 338 (378)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcc-cccC----Cccc--------cCccEEEEEcCCchHHHHHHHHHHHHHcCCeeccc
Confidence 233445556667777777765432 1111 0110 1245889988751 011123444443335555554
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 487 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 487 ~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+.. ..++.+|+|++..++++.++.|.++|++
T Consensus 339 ~~~-----------------------~~~~~vRis~~~~~t~~di~~l~~al~~ 369 (378)
T PRK03080 339 PYR-----------------------DAPNGLRIWCGPTVEPADVEALTPWLDW 369 (378)
T ss_pred ccc-----------------------CCCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 321 0146799999998887777777777764
No 251
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=4.4e-15 Score=154.47 Aligned_cols=215 Identities=18% Similarity=0.204 Sum_probs=162.3
Q ss_pred hhHHHHHHHHHHHhCCC--cE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----
Q 009167 210 PTTVVVEEKMSALEGAE--ST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e--~~-i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
....++.+.|..+++.+ ++ ++.+||+.++..++.++++|||+|++......+.+ +.++++++|.+++.++.
T Consensus 38 ~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R--~~~ia~~~g~~v~~~~~~wg~ 115 (383)
T COG0075 38 GIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGER--FAEIAERYGAEVVVLEVEWGE 115 (383)
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHH--HHHHHHHhCCceEEEeCCCCC
Confidence 35667788888888875 44 44578999999999999999999999888776643 56788999999888864
Q ss_pred -CCHHHHHHhccCC-CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCC-CCcccccccCCcEEEECCcccc
Q 009167 283 -ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFI 359 (541)
Q Consensus 283 -~d~e~Le~al~~~-~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~-~~~~~~~~~gaDivv~S~sK~l 359 (541)
.|+++++++++++ ..++|.+.+--..||.+.|+++|+++|++||+++|||.+-+. ....+..++|+|+++.+..|.+
T Consensus 116 ~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l 195 (383)
T COG0075 116 AVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKAL 195 (383)
T ss_pred CCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhc
Confidence 3899999999832 477888877767889999999999999999999999999653 4567788899999999999999
Q ss_pred CCCCCceEEEEEeChHHHHHHHHH------------hh------hcCCCchHHHHHHHHHhHHH-----HHHHHHHHHHH
Q 009167 360 GGHNDVLAGSISGSGKLVTQIRNL------------HH------VLGGALNPNAAYLIIRGMKT-----LHLRVQQQNST 416 (541)
Q Consensus 360 gg~gd~~gG~lv~~~~li~~l~~~------------~~------~~G~~~s~~~a~l~l~~l~t-----l~~r~~~~~~~ 416 (541)
+++.+ .|++..+++.++.+... .. .+-.+++....+.+..+++. ++.|.+++..+
T Consensus 196 ~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~ 273 (383)
T COG0075 196 GAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRL 273 (383)
T ss_pred cCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 97763 57787777665554321 11 11122222223333333332 56788899999
Q ss_pred HHHHHHHHHhCC
Q 009167 417 ALRMAKILEAHP 428 (541)
Q Consensus 417 a~~la~~L~~~p 428 (541)
++.+.+.+++..
T Consensus 274 ~~a~r~~~~alG 285 (383)
T COG0075 274 AEALRAGLEALG 285 (383)
T ss_pred HHHHHHHHHHcC
Confidence 999999998763
No 252
>PLN00144 acetylornithine transaminase
Probab=99.72 E-value=2.1e-15 Score=159.81 Aligned_cols=283 Identities=15% Similarity=0.173 Sum_probs=176.4
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc---c------C------CCEEEEcCCCCcchHHHHHhhc-
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---P------A------GGHIVTTTDCYRKTRIFIETVL- 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all---~------p------Gd~Vlv~~~~y~~~~~~~~~~l- 270 (541)
+.++...+|.++|+++.+.+.+++++||++|+..+++... . + ..+|+.....|++........-
T Consensus 54 ~~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~ 133 (382)
T PLN00144 54 YHTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTS 133 (382)
T ss_pred ccCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCC
Confidence 4577788899999988777788999999999999987431 1 0 2478888888888432211110
Q ss_pred --------ccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC
Q 009167 271 --------PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP 338 (541)
Q Consensus 271 --------~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~ 338 (541)
...--.+.+++..|++++++.+..+++++|++|..+||.|...+ +++|.++|++||+++|+||++...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~ 213 (382)
T PLN00144 134 KEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGL 213 (382)
T ss_pred CccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 00011245667779999999886556899999988899555442 779999999999999999996532
Q ss_pred -Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHH--HH
Q 009167 339 -LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RV 410 (541)
Q Consensus 339 -~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~--r~ 410 (541)
.. ........| +.+++|.++++ ...|++++++++++.+...........+|..+.+++..++.+.. ..
T Consensus 214 gr~g~~~~~~~~~~~PD--i~t~sK~l~~G--~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~ 289 (382)
T PLN00144 214 GRTGYLWAHEAYGVEPD--IMTLAKPLAGG--LPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFL 289 (382)
T ss_pred CccchHhhhhhcCCCCC--EEEecccccCC--cceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHH
Confidence 11 112233456 55589999864 46899999998888775432222233456666666645544321 11
Q ss_pred HHHHHHHHHHHH----HHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccC
Q 009167 411 QQQNSTALRMAK----ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 411 ~~~~~~a~~la~----~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G 486 (541)
++..+..+++.+ .+.++|.+.. ++|.|.++|+++.. ....+...+...|+.+..+
T Consensus 290 ~~~~~~g~~l~~~l~~~~~~~~~~~~------------------vrg~G~~~~l~l~~---~~~~~~~~~~~~Gv~i~~~ 348 (382)
T PLN00144 290 ASVAKKGEYLRELLRRKLGGNPHVKE------------------VRGVGLLVGIQLDV---PAGPLVDACRDSGLLVLTA 348 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcee------------------eecCceEEEEEecC---ccHHHHHHHHHCCeEEeec
Confidence 222222223333 3333333222 24578899999942 2345666666556544322
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC-C---CHHHHHHHHHHHHhh
Q 009167 487 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV-E---DFEDLKADVLQALHA 540 (541)
Q Consensus 487 ~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~-e---~~edli~dL~~AL~~ 540 (541)
+ ..+.|||+++. . +.+..++.|+++|.+
T Consensus 349 ~--------------------------~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 349 G--------------------------KGDVVRLVPPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred C--------------------------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHh
Confidence 0 13679999987 3 334445555565543
No 253
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.72 E-value=2e-17 Score=168.36 Aligned_cols=221 Identities=24% Similarity=0.318 Sum_probs=156.6
Q ss_pred ccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.|+ .++...+|++++++++|.+.++++.+|+.|+.++++++++|++.|++....|......- ......|.++..++.
T Consensus 24 ~Yg--~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~g-a~~~~~G~~~~~l~~ 100 (290)
T PF01212_consen 24 AYG--EDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETG-AIEELSGAKLIPLPS 100 (290)
T ss_dssp CTT--SSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTT-HHHHHTTCEEEEEBE
T ss_pred ccC--CChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccc-hhhHhcCcEEEECCC
Confidence 466 58999999999999999999999999999999999999999999999988764322110 011224777766643
Q ss_pred -----CCHHHHHHhccC-----CCceEEEEeCCCCCC-Ccccc---HHHHHHHHHhCCCEEEEeCCCC---C---CCccc
Q 009167 283 -----ADMEGLEAALNN-----NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFA---T---PLNQK 342 (541)
Q Consensus 283 -----~d~e~Le~al~~-----~~tklV~lesP~NPt-G~i~d---l~~Ia~la~~~gi~lIvDea~a---~---~~~~~ 342 (541)
.++++|++++.. .++++|++|+|+|.. |.+++ +++|.++||+||+.|++|.+-. . .....
T Consensus 101 ~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~ 180 (290)
T PF01212_consen 101 DDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLA 180 (290)
T ss_dssp CTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHH
T ss_pred cccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHH
Confidence 378999998864 248999999999864 77776 5688888999999999999921 1 11222
Q ss_pred ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCch---HHHH---H--HHHHhHHHHHHHHHHHH
Q 009167 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN---PNAA---Y--LIIRGMKTLHLRVQQQN 414 (541)
Q Consensus 343 ~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s---~~~a---~--l~l~~l~tl~~r~~~~~ 414 (541)
....++|++..|++|.++.++ +++++++++++++.+.+++.+|+.+. ...+ + ..+..++....++.+-.
T Consensus 181 e~~~~~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~ 257 (290)
T PF01212_consen 181 EIAAGADSVSFGGTKNGGAPG---GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQFAALRALELWLERARHAN 257 (290)
T ss_dssp HHHTTSSEEEEETTSTT-SSS---EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHHHHCHEECSHHHHHCHH
T ss_pred HHhhhCCEEEEEEEccccccc---ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhHHHHHHHHhhHHHHHHHH
Confidence 334689999999999988764 88999999988776666666665432 1222 1 22223333345566666
Q ss_pred HHHHHHHHHHHhCCC
Q 009167 415 STALRMAKILEAHPK 429 (541)
Q Consensus 415 ~~a~~la~~L~~~p~ 429 (541)
++++++++.|+..+.
T Consensus 258 ~~A~~La~~l~~~~~ 272 (290)
T PF01212_consen 258 AMAKRLAAGLEALGG 272 (290)
T ss_dssp HHHHCHHHCHHEECE
T ss_pred HHHHHHHHHHHHCCC
Confidence 788888888887654
No 254
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.72 E-value=3.5e-15 Score=152.07 Aligned_cols=270 Identities=18% Similarity=0.209 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHhC----C------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 212 TVVVEEKMSALEG----A------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 212 ~~~Le~~LA~l~g----~------e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+++++|++.+ . +..+++++++.|++++...|+.|||..+++.|-|++.-+ .+-=+.|++++.+.
T Consensus 123 l~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdr---dl~~rTgveivpv~ 199 (471)
T KOG0256|consen 123 LPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVEIVPVH 199 (471)
T ss_pred chHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccc---cceeccCceEEEEE
Confidence 4467888888762 1 356666677799999999999999999999999998532 12224588887775
Q ss_pred CC-------CHHHHHHhccC-----CCceEEEEeCCCCCCCccccHH---HHHHHHHhCCCEEEEeCCCCCCCcccc---
Q 009167 282 PA-------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQKA--- 343 (541)
Q Consensus 282 ~~-------d~e~Le~al~~-----~~tklV~lesP~NPtG~i~dl~---~Ia~la~~~gi~lIvDea~a~~~~~~~--- 343 (541)
.. +.++||+++.+ .++|.|++.+|+||.|.+.+-+ .+..+|.++++.||+||+|+..++...
T Consensus 200 c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~ 279 (471)
T KOG0256|consen 200 CSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFR 279 (471)
T ss_pred eecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCce
Confidence 32 57888877742 2689999999999999999855 566677899999999999876443221
Q ss_pred --c--------ccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCCCchHHHHHHHHHhHHH-------
Q 009167 344 --L--------SLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------- 405 (541)
Q Consensus 344 --~--------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t------- 405 (541)
+ .....-++.|+||-+|-+| ...|+++... .+....+++. .+|.. ++..++++..-|.+
T Consensus 280 Sv~ev~~~~~~~~~rvHivyslSKD~GlpG-fRvGviYS~ne~VvsaA~kms-sf~~v-Ss~tQ~~la~LLSD~~f~~~y 356 (471)
T KOG0256|consen 280 SVLEVRKDPHLDPDRVHIVYSLSKDFGLPG-FRVGVIYSNNEDVVSAATKMS-SFGLV-SSQTQYLLASLLSDEEFTREY 356 (471)
T ss_pred EHHHHhhccccCCCcEEEEEEeccccCCCc-eEEEEEEecChHHHHHHHHHh-hccCC-cHHHHHHHHHHhchHHHHHHH
Confidence 1 1122357899999999877 4578888754 5555555543 34443 44444443333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-----CHH----HHHHHHHHc
Q 009167 406 LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-----DLT----ATIKFIDAL 476 (541)
Q Consensus 406 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-----~~~----~~~~~l~~L 476 (541)
+.+..+|......++.+.|++. ..|.+++ +.|.++|+++.. +.+ .-++++++.
T Consensus 357 l~en~~Rl~~rh~~~~~gLk~l------gI~cl~s------------~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~v 418 (471)
T KOG0256|consen 357 LRENNKRLRIRHRYIVEGLKAL------GIPCLKS------------NAGLFCWVDLRKLLTSLTFEGELELWERILDNV 418 (471)
T ss_pred HHHHHHHHHHHHHHHHhhHHhc------CCceeec------------CCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhh
Confidence 1122223333344555555543 3454443 256778888752 111 223444443
Q ss_pred cCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009167 477 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 529 (541)
Q Consensus 477 ~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~ed 529 (541)
++-+|+|..+ |.+ .+|+.|+.+.....+.
T Consensus 419 ---klnlSpG~s~----------~C~-----------EpGWFRvcFAn~~~~t 447 (471)
T KOG0256|consen 419 ---KLNLSPGSSC----------HCH-----------EPGWFRVCFANMSEET 447 (471)
T ss_pred ---ccccCCCCcc----------eec-----------CCCeEEEEeccCCHHH
Confidence 4556777542 221 3689999998655443
No 255
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.71 E-value=6.1e-15 Score=160.00 Aligned_cols=214 Identities=16% Similarity=0.096 Sum_probs=138.3
Q ss_pred CchhHHHHHH----HHHHHhCCC-cEEEe----CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHH--HHHhh--cccCC
Q 009167 208 GNPTTVVVEE----KMSALEGAE-STVIM----ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRI--FIETV--LPKMG 274 (541)
Q Consensus 208 ~~p~~~~Le~----~LA~l~g~e-~~i~~----sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~--~~~~~--l~~~G 274 (541)
++...+++|+ +..++++++ ..+.+ .||+.|+..++.++++|||+|+..+..+++... ..... +...+
T Consensus 74 G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~ 153 (475)
T PLN03226 74 GNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATS 153 (475)
T ss_pred CChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccce
Confidence 4456677765 455566764 45545 899999999999999999999996644433221 11111 11122
Q ss_pred eEEE--EeCCC------CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-----c
Q 009167 275 ITAT--VIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----Q 341 (541)
Q Consensus 275 i~v~--~vd~~------d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-----~ 341 (541)
..+. .+..+ |+++|++++...++++|++ ..++ ++...|+++|.++|+++|+++++|+++..++. .
T Consensus 154 ~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~-~~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~ 231 (475)
T PLN03226 154 IYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIA-GASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAA 231 (475)
T ss_pred EEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEE-ecCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC
Confidence 2211 22222 8999999887545787766 3333 78899999999999999999999999776543 1
Q ss_pred cccccCCcEEEECCccccCCCCCceEEEEEeChHHH-----------HH---HHHH-hhhcCCCchHHHHHHHHHhHHHH
Q 009167 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV-----------TQ---IRNL-HHVLGGALNPNAAYLIIRGMKTL 406 (541)
Q Consensus 342 ~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li-----------~~---l~~~-~~~~G~~~s~~~a~l~l~~l~tl 406 (541)
.+.+ ++|+++.|+||++.|+. ||+++++++++ +. +... ...+.+.+++...+.+..+++.+
T Consensus 232 ~p~~-~~Div~~t~hK~L~GP~---Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i 307 (475)
T PLN03226 232 SPFE-YCDVVTTTTHKSLRGPR---GGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA 307 (475)
T ss_pred CCCC-CCeEEEecCcccccCCC---ceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH
Confidence 2333 69999999999996653 68888776543 21 1111 11233344444444444444443
Q ss_pred -----HHHHHHHHHHHHHHHHHHHhC
Q 009167 407 -----HLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 407 -----~~r~~~~~~~a~~la~~L~~~ 427 (541)
..+.++..++++++++.|.+.
T Consensus 308 ~~~~~~~~~~~~~~na~~L~~~L~~~ 333 (475)
T PLN03226 308 MTPEFKAYQKQVKANAAALANRLMSK 333 (475)
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHhC
Confidence 335677778999999998874
No 256
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.71 E-value=2.2e-15 Score=158.24 Aligned_cols=277 Identities=12% Similarity=0.066 Sum_probs=172.8
Q ss_pred hhHHHHHHHHHHHhCC--C-cEEEeCC-HHHHHHHHHHHhcc---CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 210 PTTVVVEEKMSALEGA--E-STVIMAS-GMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~--e-~~i~~sS-Gs~Ai~~al~all~---pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...++.|+.+++++|+ + +++++++ ||+++++++..+++ +||+|++.. |.. + +...+++.|+++++++.
T Consensus 44 ~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g~--~~~--~-~~~~a~~~g~~~~~~~~ 118 (355)
T cd00611 44 AIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTGA--WSA--K-AAKEAKRYGGVVVIVAA 118 (355)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCH--HHH--H-HHHHHHhcCCCcEEEec
Confidence 5677889999999996 2 3566655 88999999999987 566666521 211 1 12355777888887764
Q ss_pred C------C-HHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEEEC
Q 009167 283 A------D-MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHS 354 (541)
Q Consensus 283 ~------d-~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv~S 354 (541)
+ + ++..+..+++ ++++|.+.+-.|.||.+++ ++++.+|++++||.+++.+ .+.+..+++ +++.|
T Consensus 119 ~~~g~~~~~~~~~~~~~~~-~~~lV~~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss 190 (355)
T cd00611 119 KEEGKYTKIPDVETWDLAP-DAAYVHYCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSKFG--VIYAG 190 (355)
T ss_pred ccccCCCCCCCHhhcCCCC-CCCEEEEeCCcccccEEcc-----eecccCCCeEEEEccccccCCCCCHHHhC--EEEee
Confidence 2 3 3333344555 5999999999999999743 4556699999999997764 345554444 56677
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHH-------h---h--hcCCCchHHHHHHHHHhHHHH------HHHHHHHHHH
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNL-------H---H--VLGGALNPNAAYLIIRGMKTL------HLRVQQQNST 416 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~-------~---~--~~G~~~s~~~a~l~l~~l~tl------~~r~~~~~~~ 416 (541)
.+|++|++| .|+++.++++++++... . . ..-++++....+.+..+++.+ +.+.++..+.
T Consensus 191 ~~K~lGP~G---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l 267 (355)
T cd00611 191 AQKNLGPAG---VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQK 267 (355)
T ss_pred cccccCCCc---eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999887 68888888877654421 0 0 011233333344444444443 2334455567
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCc
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa 496 (541)
++++.++|++.|++ +... ..+.. ..+.+++|.+++. ....++++.+...|+....|
T Consensus 268 ~~~l~~~l~~~~gl----~~~~-~~~~~--------rs~~vvsf~~~~~-~l~~~~~~~~~r~G~~~~~~---------- 323 (355)
T cd00611 268 AQLLYDTIDNSNGF----YRGP-VDKRA--------RSRMNVPFRLGKE-ELEKEFLKEAEAAGMIGLKG---------- 323 (355)
T ss_pred HHHHHHHHHhCccc----cccC-CCHHH--------cCceEEEEEcCCh-hhhHHHHHHHHHCCCcccCC----------
Confidence 77778888877652 2111 11110 1245799998752 11133333332233211111
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
| + ..+.||+|++..++++.|+.|.++|+++
T Consensus 324 ---~-----------~-~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 324 ---H-----------R-SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ---C-----------c-ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 1 0 1368999999999999999999998863
No 257
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=5.5e-15 Score=156.15 Aligned_cols=277 Identities=13% Similarity=0.097 Sum_probs=170.0
Q ss_pred hHHHHHHHHHHHhCC--C-cEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchH-HHHHhh-----cccCCe---E
Q 009167 211 TTVVVEEKMSALEGA--E-STVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTR-IFIETV-----LPKMGI---T 276 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~--e-~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~-~~~~~~-----l~~~Gi---~ 276 (541)
....+++.+|+.+.. + .+++++||++|+..+++.. ...+++|++.+..|++.. ..+... ...++. .
T Consensus 67 ~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~ 146 (375)
T PRK04260 67 YLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPH 146 (375)
T ss_pred cCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCC
Confidence 445667777765432 2 2578889999999888765 245678999888888632 222110 011111 1
Q ss_pred EEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCc-ccc-----ccc
Q 009167 277 ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-QKA-----LSL 346 (541)
Q Consensus 277 v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~-~~~-----~~~ 346 (541)
+.+.+.+|++++++.+++ ++++|++|.++|++|.+.+ +++|.++|+++|+++|+||++..... ..+ ...
T Consensus 147 ~~~~~~~dl~~l~~~l~~-~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~ 225 (375)
T PRK04260 147 FSYAIFNDLNSVKALVNK-NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI 225 (375)
T ss_pred eEEeCCCCHHHHHHhcCC-CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC
Confidence 333445689999998876 4899999999999998876 79999999999999999999753211 111 123
Q ss_pred CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHH
Q 009167 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKIL 424 (541)
Q Consensus 347 gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L 424 (541)
..|++ |++|.++++ ...|++++++++.+.+...........++..+..+...++.+. ..+++..+..+.+.+.|
T Consensus 226 ~pdi~--t~sK~l~~G--~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l 301 (375)
T PRK04260 226 EPDIF--TLAKGLANG--VPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQL 301 (375)
T ss_pred CCCEE--EecccccCC--cceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 45655 799999853 4579999998887776532211112224555555555554432 22333334444444444
Q ss_pred H----hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccc
Q 009167 425 E----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 500 (541)
Q Consensus 425 ~----~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~ 500 (541)
. +++.+..+ ++.|.+++++++. ...+|.+.+...|+.+..+
T Consensus 302 ~~~~~~~~~~~~~------------------~~~g~~~~~~~~~---~~~~~~~~l~~~Gi~v~~~-------------- 346 (375)
T PRK04260 302 QKALQDKETVTTV------------------RGLGYMIGIETTA---DLSQLVEAARDKGLIVLTA-------------- 346 (375)
T ss_pred HHHHhhCCCeeEE------------------eccceEEEEEecC---cHHHHHHHHHhCCCEEecC--------------
Confidence 3 33222211 2357899999853 2456667766555433211
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 501 WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 501 ~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+.||++.....+++.++.+.+.|++
T Consensus 347 -------------~~~~lR~~~~~~~t~~~i~~~l~~l~~ 373 (375)
T PRK04260 347 -------------GTNVIRLLPPLTLTKEEIEQGIAILSE 373 (375)
T ss_pred -------------CCCEEEEcCCCccCHHHHHHHHHHHHH
Confidence 136799999665556666666665553
No 258
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.70 E-value=4.1e-15 Score=171.43 Aligned_cols=166 Identities=15% Similarity=0.159 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHHhCCCcEEEeCCHH----HHHHHHHHHhccC-CC----EEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALEGAESTVIMASGM----SASTVMLLALVPA-GG----HIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e~~i~~sSGs----~Ai~~al~all~p-Gd----~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...++|+.|++++|.+.+++..+.+ +|++++++++.++ || +||++...|+.....+. ..|+++++++
T Consensus 569 ~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~----~~G~~vv~v~ 644 (993)
T PLN02414 569 MFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA----MCGMKIVVVG 644 (993)
T ss_pred HHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH----HCCCEEEEec
Confidence 4568899999999998777777666 6999999999877 88 89999999998765443 2588888887
Q ss_pred CC-----CHHHHHHhccC--CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC--CcccccccCCcEEE
Q 009167 282 PA-----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVL 352 (541)
Q Consensus 282 ~~-----d~e~Le~al~~--~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~--~~~~~~~~gaDivv 352 (541)
.+ |+++|++++++ .+|++|++.+|+|.+|...|+++|+++||++|+++++|.++... ...++.++|+|+++
T Consensus 645 ~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~ 724 (993)
T PLN02414 645 TDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCH 724 (993)
T ss_pred cCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEE
Confidence 53 89999999984 24899999999999999999999999999999999999997543 34567789999999
Q ss_pred ECCccccCCC---CCceEEEEEeChHHHHHH
Q 009167 353 HSATKFIGGH---NDVLAGSISGSGKLVTQI 380 (541)
Q Consensus 353 ~S~sK~lgg~---gd~~gG~lv~~~~li~~l 380 (541)
+|.||+|+++ |+...|+++.++.+...+
T Consensus 725 ~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~l 755 (993)
T PLN02414 725 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 755 (993)
T ss_pred ecCCccCCcCcccCCCCeeeEEEchhhcccC
Confidence 9999966632 222367888887665544
No 259
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.69 E-value=7.3e-15 Score=153.80 Aligned_cols=285 Identities=11% Similarity=0.046 Sum_probs=184.8
Q ss_pred CCccCCCCc---hhHHHHHHHHHHHhCC-C--cEEEeC-CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009167 201 SFEYGRYGN---PTTVVVEEKMSALEGA-E--STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 201 ~~~Y~R~~~---p~~~~Le~~LA~l~g~-e--~~i~~s-SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
.+..+.... ...+++++.|.++++. + ++++++ ||+.|+++++..++++||++++....+.+.+ +...++++
T Consensus 25 ~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r--~~~~a~~~ 102 (349)
T TIGR01364 25 VMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKK--AAKEAKKY 102 (349)
T ss_pred ccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHh
Confidence 344444444 5677889999999995 2 366664 4889999999999999999888776666643 34667777
Q ss_pred CeEEEEeC---------CCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-Ccccc
Q 009167 274 GITATVID---------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKA 343 (541)
Q Consensus 274 Gi~v~~vd---------~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~ 343 (541)
|+ +..+. ..++++++ +++ ++++|.+.+-.+.||...+ ++++.++++++||.+.+.+ .+.+.
T Consensus 103 g~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id~ 173 (349)
T TIGR01364 103 GV-VNVVASGKEGNYTKIPDPSTWE--ISE-DAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPIDV 173 (349)
T ss_pred CC-cEEEeccccCCCCCCCCHHhcC--CCC-CCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccCCH
Confidence 87 44433 12444443 334 5899999888899999887 6677789999999997654 34444
Q ss_pred cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-------h-----hhcCCCchHHHHHHHHHhHHH------
Q 009167 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------H-----HVLGGALNPNAAYLIIRGMKT------ 405 (541)
Q Consensus 344 ~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-------~-----~~~G~~~s~~~a~l~l~~l~t------ 405 (541)
.+ .|++++|.+|++|++| .|+++.++++++++... . ...-++++....+.+..+++.
T Consensus 174 ~~--~d~~~~ssqK~lgP~G---lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG 248 (349)
T TIGR01364 174 SK--FGLIYAGAQKNIGPAG---LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGG 248 (349)
T ss_pred HH--ccEEEEecccccCCCc---eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCC
Confidence 44 3599999999999887 78888898887655321 1 011123333333333334433
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeeccc
Q 009167 406 LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 485 (541)
Q Consensus 406 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~ 485 (541)
++.+.+++.+.++++.++|++.+++ ..+.. .|.. ..+.+++|.+++. ....+++..+...|+.+..
T Consensus 249 ~e~i~~r~~~l~~~l~~~l~~~~gl---~~~~~--~~~~--------rs~~v~sf~~~~~-~~~~~~~~~~~~~Gi~~~~ 314 (349)
T TIGR01364 249 VKAIEKRNQAKAQLLYDTIDNSNGF---YRNPV--DPRN--------RSRMNVVFTLGNE-ELEKRFLKEAEERGLVSLK 314 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCe---eccCC--CHHH--------cCCeEEEEecCCh-hHhHHHHHHHHHCCCcccC
Confidence 3444556667788888888887652 11111 1111 1245789998753 1224555555444542222
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 486 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 486 G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
|.. ..+.+|+|++..++++.|+.|.++|++
T Consensus 315 ~~~-------------------------~~g~vRvS~~~~nt~edid~l~~al~~ 344 (349)
T TIGR01364 315 GHR-------------------------SVGGMRASIYNAMPLEGVQALVDFMKE 344 (349)
T ss_pred Ccc-------------------------ccCeeEEECcCCCCHHHHHHHHHHHHH
Confidence 100 135899999999888888888888875
No 260
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.69 E-value=1.3e-14 Score=155.76 Aligned_cols=285 Identities=16% Similarity=0.174 Sum_probs=175.8
Q ss_pred CCchhHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhh-------c------
Q 009167 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV-------L------ 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~-e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~-------l------ 270 (541)
+.++...+|+++|+++.+. +.+++++||++|+..+++.. ....++||+..+.|++....+... .
T Consensus 85 ~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~ 164 (423)
T TIGR00713 85 APTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSP 164 (423)
T ss_pred CCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCC
Confidence 4567788999999998864 57888899999999988753 235689999999999853222110 0
Q ss_pred ---ccCCeEEEEeCCCCHHHHHHhccC--CCceEEEEe-CCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCc
Q 009167 271 ---PKMGITATVIDPADMEGLEAALNN--NNVSLFFTE-SPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN 340 (541)
Q Consensus 271 ---~~~Gi~v~~vd~~d~e~Le~al~~--~~tklV~le-sP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~ 340 (541)
...+..+..++..|+++++++++. .++++|++| .++| +|.+.+ +++|.++|++||+++|+||++.....
T Consensus 165 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~ 243 (423)
T TIGR00713 165 GVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRV 243 (423)
T ss_pred CCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccccc
Confidence 000112334556689999998862 258999998 5566 788877 68999999999999999999753211
Q ss_pred -----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-hcC--CCchHHHHHHHHHhHHHHHH--HH
Q 009167 341 -----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTLHL--RV 410 (541)
Q Consensus 341 -----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G--~~~s~~~a~l~l~~l~tl~~--r~ 410 (541)
........|++ +++|.+++ | ..+|++++++++++.+..... ..+ ...++..+..++..++.+.. ..
T Consensus 244 g~~~~~~~~~~~pDi~--t~sK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~ 319 (423)
T TIGR00713 244 ALGGAQEYFGVEPDLT--TLGKIIGG-G-LPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVY 319 (423)
T ss_pred CcchhHHHhCCCcchh--hhhhhhcC-C-CceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHH
Confidence 11122335655 69999984 3 468999999998888753211 111 13456666665556654432 23
Q ss_pred HHHHHHHHHHHH----HHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC------------HHHHHHHHH
Q 009167 411 QQQNSTALRMAK----ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFID 474 (541)
Q Consensus 411 ~~~~~~a~~la~----~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~------------~~~~~~~l~ 474 (541)
++..+...++.+ .+++++.+..+ ++.|+++.+++..+ ......+.+
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~~v------------------~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (423)
T TIGR00713 320 TELDELAKRLAEGLSEVLEDTGIPHTV------------------NRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFH 381 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEE------------------EeeccEEEEEEecCCCCChhhhhcccHHHHHHHHH
Confidence 333333333333 33444332222 23577888877421 122345666
Q ss_pred HccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec--CCCHHHHHHHHHHHHhhC
Q 009167 475 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG--VEDFEDLKADVLQALHAI 541 (541)
Q Consensus 475 ~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG--~e~~edli~dL~~AL~~i 541 (541)
.|...++.+..++ .+.+||+.. .++.+.+++.|+++|+++
T Consensus 382 ~l~~~Gv~v~~~~---------------------------~~~~~l~~~~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 382 EMLDKGVFLPPSQ---------------------------FEACFLSAAHTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred HHHHCCeEEecCC---------------------------ccceeeECCCCHHHHHHHHHHHHHHHhhC
Confidence 6655555443211 123566664 245566777777777653
No 261
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.68 E-value=3.8e-15 Score=150.93 Aligned_cols=283 Identities=18% Similarity=0.222 Sum_probs=194.9
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e 286 (541)
+....+||+.||++.+.+.+++|+|..-|+...|..|. -||-+|......|.+....+ +.-+++-..+..+|++
T Consensus 215 s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GI----rns~v~K~IFrHND~~ 290 (570)
T KOG1360|consen 215 SKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGI----RNSRVPKHIFRHNDLD 290 (570)
T ss_pred CchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHh----hhcCCcceeeccCCHH
Confidence 45678999999999999999999999988888887774 47888887777776654333 3345555567788999
Q ss_pred HHHHhccCC---CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc---------cccccCCcEEEEC
Q 009167 287 GLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVLHS 354 (541)
Q Consensus 287 ~Le~al~~~---~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~---------~~~~~gaDivv~S 354 (541)
.|+++++.. -+|+|.+|+.+..+|.+.|+++|++++++||++..+||+++.++.. +..-...||+..+
T Consensus 291 hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGT 370 (570)
T KOG1360|consen 291 HLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGT 370 (570)
T ss_pred HHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccc
Confidence 999988642 4799999999999999999999999999999999999996654321 1122347999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHHHHH-----HHHHHHHHHHHHHHHHHHhC
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTLH-----LRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~tl~-----~r~~~~~~~a~~la~~L~~~ 427 (541)
+.|.||. +||++.+...+++.+|.+.. ++.+.++|....-++.+++.+. ...++++++..++.+.|.+.
T Consensus 371 LgKafGc----VGGYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~ 446 (570)
T KOG1360|consen 371 LGKAFGC----VGGYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL 446 (570)
T ss_pred hhhhccc----ccceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 9999985 47999999999999997654 4556677755444444444332 22345667888888888764
Q ss_pred CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCcccccccCccccccCCCHH
Q 009167 428 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQS 506 (541)
Q Consensus 428 p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~~~~~~~~~ 506 (541)
. .|-++ .|. .++-+.+- +.....+..+.| ..++|-+- .+..|...
T Consensus 447 G------iPVi~-~pS------------HIiPv~vg-da~l~~~~sd~Li~~h~iYvQ------aINyPTV~-------- 492 (570)
T KOG1360|consen 447 G------IPVIP-NPS------------HIIPVRVG-DAALAKQASDILISKHNIYVQ------AINYPTVA-------- 492 (570)
T ss_pred C------CcccC-CCc------------ceeeeecc-CHHHHHHHHHHHHHhcCeEEE------eccCCccc--------
Confidence 2 23221 222 36777663 433333333333 11222111 11223211
Q ss_pred HHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 507 ERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 507 ~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
.....+||.....++.++.++|.++|.
T Consensus 493 ------rG~E~LRiaPTP~HT~~mm~~lv~~l~ 519 (570)
T KOG1360|consen 493 ------RGTERLRIAPTPHHTPQMMNILVNALL 519 (570)
T ss_pred ------ccceeeecCCCCCCCHHHHHHHHHHHH
Confidence 134679999888777777777776654
No 262
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.68 E-value=2.8e-15 Score=146.75 Aligned_cols=280 Identities=20% Similarity=0.275 Sum_probs=187.3
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHH-
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME- 286 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e- 286 (541)
....+..||.+||++.+.|++|+++++..|+..++.+++.|.|-|+.....|.+...-+ .++++++ .+|..|++
T Consensus 110 tq~iHk~LE~kiAqfh~rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGi-rLckry~----h~dv~~l~~ 184 (417)
T KOG1359|consen 110 TQDIHKLLESKIAQFHGREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGI-RLCKRYR----HVDVFDLEH 184 (417)
T ss_pred chHHHHHHHHHHHHHhCCCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhh-HHHhhhc----cchhHHHHH
Confidence 45678899999999999999999999999999999999999999999888888866555 2344332 23333332
Q ss_pred HHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccc-------c--ccCCcEEEECCcc
Q 009167 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA-------L--SLGADLVLHSATK 357 (541)
Q Consensus 287 ~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~-------~--~~gaDivv~S~sK 357 (541)
.+.++.+. +.|+|.....-+..|.+.|+++|.+++++||.++++||++++++...- + .-.+|++..+++|
T Consensus 185 ~l~~a~k~-r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgK 263 (417)
T KOG1359|consen 185 CLISACKM-RLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGK 263 (417)
T ss_pred HHHHhhhh-eEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhh
Confidence 22233333 578999988889999999999999999999999999999888654211 1 1247899999999
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCCceE
Q 009167 358 FIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKVKR 432 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~v~~ 432 (541)
.+||.. ||+..++++|++.++...+ .+...++|.....+...++.+ ...+++.+.+.+++.++.+... + .
T Consensus 264 AlGga~---GGyttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~aG-f-t 338 (417)
T KOG1359|consen 264 ALGGAS---GGYTTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAAG-F-T 338 (417)
T ss_pred hhcCCC---CCCccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC-c-e
Confidence 999764 8999999999998886443 455566654333322233222 2223455566777777766532 1 1
Q ss_pred EeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcC---eecccCCcccccccCccccccCCCHHHHH
Q 009167 433 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY---IAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 433 v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~---iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
+. + .+|| +..+-+ |+...+.++-+.|-..| +++|. |.. |+
T Consensus 339 Is--g-~~hP--------------I~pv~l-Gda~lA~~~ad~lLk~Gi~Vigfs~---------PvV------P~---- 381 (417)
T KOG1359|consen 339 IS--G-ASHP--------------ICPVML-GDARLASKMADELLKRGIYVIGFSY---------PVV------PK---- 381 (417)
T ss_pred ec--C-CCCC--------------ccceec-ccHHHHHHHHHHHHhcCceEEeecC---------CcC------CC----
Confidence 11 1 1222 444545 45556666666654333 33222 211 10
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 510 KYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
....||+.+..-++++.|+.+.+|+.
T Consensus 382 ----gkariRVqiSAaHt~edid~~i~Af~ 407 (417)
T KOG1359|consen 382 ----GKARIRVQISAAHTEEDIDRLIEAFS 407 (417)
T ss_pred ----CceEEEEEEehhcCHHHHHHHHHHHH
Confidence 23468888887776666677766664
No 263
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.68 E-value=9.8e-15 Score=156.20 Aligned_cols=212 Identities=15% Similarity=0.151 Sum_probs=152.8
Q ss_pred hhHHHHHHHHHHHhCCC---cEEEeCCHH-HHHHHHHHHhcc---CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 210 PTTVVVEEKMSALEGAE---STVIMASGM-SASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e---~~i~~sSGs-~Ai~~al~all~---pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
....+|++.+++++|.+ .++++++|+ .++.+++.++-. +||+||++...|.++... +...|++++++|.
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kA----i~~~G~~pv~Vd~ 180 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKA----ISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHH----HHHcCCeEEEeee
Confidence 35678999999999987 689999999 688888777642 589999999998887643 4445777777763
Q ss_pred --------CCHHHHHHhccCC--CceEEEEeCCC-CCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc------cccc
Q 009167 283 --------ADMEGLEAALNNN--NVSLFFTESPT-NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALS 345 (541)
Q Consensus 283 --------~d~e~Le~al~~~--~tklV~lesP~-NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~------~~~~ 345 (541)
.|+++|+++|++. ++.++++.+|+ .++|.+.|+++|+++|++||+++|+|++|+..... ....
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~ 260 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIK 260 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcccc
Confidence 2899999999752 35666666665 55668899999999999999999999999864322 2233
Q ss_pred cC-CcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHH--HhHHHHHHHHHHHHHHHHHHH
Q 009167 346 LG-ADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLII--RGMKTLHLRVQQQNSTALRMA 421 (541)
Q Consensus 346 ~g-aDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l--~~l~tl~~r~~~~~~~a~~la 421 (541)
.| +|++++|+||++..+++ ||+++. ++++++.++..............+|+.+ .+.+.+...+++..++++++.
T Consensus 261 ~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~ 338 (444)
T TIGR03531 261 VGRVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLK 338 (444)
T ss_pred ccCCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 43 69999999999986553 677766 6778777765422111111223333332 345667777778888888888
Q ss_pred HHHHhC
Q 009167 422 KILEAH 427 (541)
Q Consensus 422 ~~L~~~ 427 (541)
+.|++.
T Consensus 339 ~~L~~l 344 (444)
T TIGR03531 339 ELLQKL 344 (444)
T ss_pred HHHHHH
Confidence 888764
No 264
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.67 E-value=8.4e-15 Score=154.00 Aligned_cols=276 Identities=12% Similarity=0.027 Sum_probs=180.3
Q ss_pred hhHHHHHHHHHHHhCC-C--cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC---
Q 009167 210 PTTVVVEEKMSALEGA-E--STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~-e--~~i~~-sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
...++.++.|+++++. + +++++ +||+.|+++++..++.+||++++......+.+ +...++++|.. ..+..
T Consensus 48 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r--~~~~a~~~g~~-~~~~~~~~ 124 (360)
T PRK05355 48 AVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKK--AIKEAKKYGEV-NVAASSED 124 (360)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCc-eEEecccc
Confidence 6788899999999996 3 34454 56779999999999999998877766555533 33566777754 33321
Q ss_pred ---CCHHHHHH-hccCCCceEEEEeCCCCCCCccc-cHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCc
Q 009167 283 ---ADMEGLEA-ALNNNNVSLFFTESPTNPFLRCV-DVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSAT 356 (541)
Q Consensus 283 ---~d~e~Le~-al~~~~tklV~lesP~NPtG~i~-dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~s 356 (541)
.+..++++ ++++ ++++|++.+-.+.||.+. |+++| +|++++||.+++.+. +.+..++ |++++|.+
T Consensus 125 ~g~~~~~~~~~~~l~~-~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~~--d~~~~ssq 195 (360)
T PRK05355 125 DGFTYIPPLDEWQLSD-DAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQ 195 (360)
T ss_pred cCCCCCCChhhccCCC-CCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHHHc--cEEEEecc
Confidence 12334444 6766 489999988889999998 77766 899999999976543 3444443 69999999
Q ss_pred cccCCCCCceEEEEEeChHHHHHHHHH-h-----------hhcCCCchHHHHHHHHHhHHH------HHHHHHHHHHHHH
Q 009167 357 KFIGGHNDVLAGSISGSGKLVTQIRNL-H-----------HVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (541)
Q Consensus 357 K~lgg~gd~~gG~lv~~~~li~~l~~~-~-----------~~~G~~~s~~~a~l~l~~l~t------l~~r~~~~~~~a~ 418 (541)
|++|++| .|+++.++++++++... . ...-++++....+.+..+++. ++.+.+++.+.++
T Consensus 196 K~lgP~G---lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~ 272 (360)
T PRK05355 196 KNIGPAG---LTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAA 272 (360)
T ss_pred ccccCCc---eEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 9999877 78899988877665431 1 011133333333433334443 3445556667788
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
++.++|++.+... + +. .+.+ ..+.+++|.+++. ....++++.+...|+.+..|.
T Consensus 273 ~l~~~l~~~~~~~----~-~~-~~~~--------rs~~v~sf~~~~~-~~~~~~~~~~~~~Gi~~~~~~----------- 326 (360)
T PRK05355 273 LLYDAIDSSDFYR----N-PV-APED--------RSRMNVPFTLADE-ELDKKFLAEAKAAGLVGLKGH----------- 326 (360)
T ss_pred HHHHHHHhCCCcc----c-CC-Chhh--------cCCcEEEEEcCCh-HHHHHHHHHHHHCCCcccCCC-----------
Confidence 8888888776211 1 00 1111 1346799998764 233455555544343221110
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+ ..+.||+|++..++.+.|+.|.++|++
T Consensus 327 -~-------------~~g~vRiS~~~~nt~eei~~l~~~l~~ 354 (360)
T PRK05355 327 -R-------------SVGGMRASIYNAMPLEGVQALVDFMKE 354 (360)
T ss_pred -C-------------ccCcEEEECCCCCCHHHHHHHHHHHHH
Confidence 0 246899999999888888888888875
No 265
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.67 E-value=5.1e-14 Score=151.52 Aligned_cols=292 Identities=14% Similarity=0.129 Sum_probs=182.6
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc-----CCCEEEEcCCCCcchHHHHHhh---------c
Q 009167 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-----AGGHIVTTTDCYRKTRIFIETV---------L 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~-----pGd~Vlv~~~~y~~~~~~~~~~---------l 270 (541)
+.++...+|.++|+++.+. +.+++++||++|+.++++.... ...+||+....|++........ .
T Consensus 114 ~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~ 193 (442)
T TIGR03372 114 LLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPF 193 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCC
Confidence 4578888999999998764 4577889999999999874321 2357888888888843211111 0
Q ss_pred ccCCeEEEEeCCCCHHHHHHhcc-----CCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC-C-
Q 009167 271 PKMGITATVIDPADMEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-L- 339 (541)
Q Consensus 271 ~~~Gi~v~~vd~~d~e~Le~al~-----~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~-~- 339 (541)
....-.+..++..|.+++++.++ .+++.+|++|......|.+.| +++|.++|++||+++|+||++... -
T Consensus 194 ~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt 273 (442)
T TIGR03372 194 MPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRT 273 (442)
T ss_pred CCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcc
Confidence 11112245567778888877764 135899999999988898888 999999999999999999996321 1
Q ss_pred ----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc--hHHHHHHHHHhHHHHHHH--HH
Q 009167 340 ----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLR--VQ 411 (541)
Q Consensus 340 ----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~--s~~~a~l~l~~l~tl~~r--~~ 411 (541)
........+|+++ ++|.++++- ...|.+++++++.+.+......++.+. +|..+..++..|+.+... .+
T Consensus 274 G~~~a~e~~gv~PDivt--~gK~lg~G~-~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~ 350 (442)
T TIGR03372 274 GKMFACEHEGVQPDILC--LAKALGGGV-MPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPA 350 (442)
T ss_pred ccchhhhhcCCCCCeee--ehhhhcCCc-ccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 1222333478877 899998531 235667778888877642111234444 577777666666665321 22
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccc
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
+..+.-+++.+.|++.. -.+|.. ....+|.|.|+.+++..+ +....+.+.+...++-++..
T Consensus 351 ~~~~~G~~l~~~L~~l~----~~~~~~---------i~~vRG~Gl~~giel~~~-~~~~~i~~~l~~~Gvl~~~~----- 411 (442)
T TIGR03372 351 QAAIKGDFLLDGFQQLA----AEYPDL---------IIEARGKGLLMAIEFRDN-EIGYAFAKELFQQNILVAGT----- 411 (442)
T ss_pred HHHHHHHHHHHHHHHHH----HhCCCc---------eEEEecceEEEEEEeCCh-HHHHHHHHHHHHCCcEEeec-----
Confidence 22233334444443310 011100 012256789999999643 34566777776555443211
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+...+.|||+..+-.+++.++.+.++|++
T Consensus 412 --------------------~~~~~~lr~~Ppl~~t~~~id~~~~~l~~ 440 (442)
T TIGR03372 412 --------------------LNNAKSIRIEPPLTITIEQCALVIKAAKD 440 (442)
T ss_pred --------------------CCCCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 01236799988877777767777666654
No 266
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.67 E-value=2e-15 Score=159.29 Aligned_cols=176 Identities=23% Similarity=0.370 Sum_probs=130.7
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC---
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
+.....+.++.+|+++|++.++++++|+ .+|..++++++++||.|++++++|.+++..+ ...|+.++++++.
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~al----il~ga~Pvyi~p~~~~ 139 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNAL----ILSGAIPVYIPPEDNE 139 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHH----HHHTEEEEEEEEEE-T
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHH----HHcCCeEEEecCCccc
Confidence 4556889999999999999999999998 8999999999999999999999999987544 2346666666431
Q ss_pred -------CH-----HHHHHhccCC-C---ceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc-----
Q 009167 284 -------DM-----EGLEAALNNN-N---VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK----- 342 (541)
Q Consensus 284 -------d~-----e~Le~al~~~-~---tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~----- 342 (541)
++ +.|+++++++ . .++|++.+|+ ..|.+.|+++|+++|+++|++|+|||+++..+.+.
T Consensus 140 ~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~ 218 (417)
T PF01276_consen 140 YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRS 218 (417)
T ss_dssp TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTT
T ss_pred cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccc
Confidence 34 8888888643 2 3459998887 68999999999999999999999999988754433
Q ss_pred ccccCCc-------EEEECCccccCCCCCceEEEEEeChH---HHHHHHHHhhhcCCC
Q 009167 343 ALSLGAD-------LVLHSATKFIGGHNDVLAGSISGSGK---LVTQIRNLHHVLGGA 390 (541)
Q Consensus 343 ~~~~gaD-------ivv~S~sK~lgg~gd~~gG~lv~~~~---li~~l~~~~~~~G~~ 390 (541)
....|+| +++.|+||.+++.. .+.++..+.+ ..++++.....+.++
T Consensus 219 a~~~gad~~~~~~~~vvqS~HKtL~alt--Qts~lh~~~~~~v~~~~~~~~l~~~~TT 274 (417)
T PF01276_consen 219 ALALGADRPNDPGIIVVQSTHKTLPALT--QTSMLHVKGDRIVDHERVNEALSMHQTT 274 (417)
T ss_dssp CSSTTSS-CTSBEEEEEEEHHHHSSS-T--T-EEEEEETCCCTTHHHHHHHHHHHS-S
T ss_pred hhhccCccccccceeeeechhhcccccc--cceEEEecCCCcccHHHHHHHHHHHcCC
Confidence 3457899 99999999999776 4566665443 246666655555443
No 267
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.66 E-value=1.5e-14 Score=151.98 Aligned_cols=277 Identities=16% Similarity=0.115 Sum_probs=176.6
Q ss_pred cCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCC-CEEEEcCCCCcchHHHHHhh---------ccc
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAG-GHIVTTTDCYRKTRIFIETV---------LPK 272 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pG-d~Vlv~~~~y~~~~~~~~~~---------l~~ 272 (541)
...+.++...+|+++|+++.+.+.+++++||++|+.++++.. ..+| ++||+.+..|++.....-.. +..
T Consensus 60 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p 139 (364)
T PRK04013 60 GPMFEHEEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEP 139 (364)
T ss_pred cCCcCCHHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCC
Confidence 345778889999999999988788999999999999999854 2345 89999999998853221110 111
Q ss_pred CCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccc-c---HHHHHHHHHhCCCEEEEeCCCCCC-----Ccccc
Q 009167 273 MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP-----LNQKA 343 (541)
Q Consensus 273 ~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~-d---l~~Ia~la~~~gi~lIvDea~a~~-----~~~~~ 343 (541)
.-..+..++..|++.+++.+.+ ++++|++|......|... | +++|.++|++||+++|+||++... .....
T Consensus 140 ~~~~~~~~~~~d~~~l~~~i~~-~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~ 218 (364)
T PRK04013 140 LVPGFKHIPFNDVEAAKEAITK-ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEH 218 (364)
T ss_pred CCCCcEEecCCCHHHHHHHhcC-CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHh
Confidence 1123455666789999999976 599999999887767655 4 889999999999999999996522 11222
Q ss_pred cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 009167 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 344 ~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~ 423 (541)
.....|+++ +.|.++++ ...|.++.++++.. . .....+ .-+|..+..++..++.+... ...++++.+.+.
T Consensus 219 ~gv~PDiv~--~gK~lggG--~P~~a~~~~~~~~~-~-~~~~T~--~gnp~~~aaa~a~l~~i~~~--~l~~~~~~~l~~ 288 (364)
T PRK04013 219 YKVEPDIVT--MGKGIGNG--VPVSLTLTNFDVER-G-KHGSTF--GGNPLACKAVAVTLRILRRE--RLVEKAGEKFIE 288 (364)
T ss_pred cCCCCCEEE--ecccccCC--ceeEEEEecccccC-C-CcCCCC--CcCHHHHHHHHHHHHHHHhc--cHHHHHHHHHHH
Confidence 344578887 68999874 45666666655411 0 011112 23567777666666665421 222333332111
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCC
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 503 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~ 503 (541)
+. .+.| ...+|.|.|+.+++... ...+.+.+...++-+...+
T Consensus 289 l~-~~~v------------------~~vRG~Gl~~gve~~~~---~~~i~~~~~~~Gll~~~~g---------------- 330 (364)
T PRK04013 289 IK-GERV------------------VTTRGRGLMIGIVLKKP---VGKYVEELQNRGYLVHTAG---------------- 330 (364)
T ss_pred hc-cCcc------------------eeeeeCcEEEEEEeCCc---HHHHHHHHHhCCcEEeeCC----------------
Confidence 11 1211 23467899999999642 3455555544454332111
Q ss_pred CHHHHHhcCCCCCeEEEEe----cCCCHHHHHHHHHHHHhh
Q 009167 504 SQSERLKYGIMDNLVRFSF----GVEDFEDLKADVLQALHA 540 (541)
Q Consensus 504 ~~~~~~~~gi~~~~IRlSv----G~e~~edli~dL~~AL~~ 540 (541)
.+.|||.. ..++.++.++.|+++|++
T Consensus 331 -----------~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 331 -----------QRVIRLLPPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred -----------CCEEEEeCCcccCHHHHHHHHHHHHHHHHH
Confidence 24566654 346667777888887764
No 268
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.66 E-value=1.4e-14 Score=146.83 Aligned_cols=254 Identities=21% Similarity=0.303 Sum_probs=161.4
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEc-CCCCcchHHHHH------hhcccCCeE
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTT-TDCYRKTRIFIE------TVLPKMGIT 276 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~---~sSGs~Ai~~al~all~pGd~Vlv~-~~~y~~~~~~~~------~~l~~~Gi~ 276 (541)
|.+..++.|++..|+.+|+|++++ +.||+.||.++|.++++|||+++.. ..-|......+. ..|+.+|+.
T Consensus 51 Y~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~ 130 (403)
T PF06838_consen 51 YDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIK 130 (403)
T ss_dssp TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-E
T ss_pred CCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCce
Confidence 346789999999999999999988 5799999999999999999999864 345655444431 135678999
Q ss_pred EEEeCCC-----CHHHHHHhccCCCceEEEEeCCC----CCCCccccHHHHHHHHHh--CCCEEEEeCCCCCCCc-cccc
Q 009167 277 ATVIDPA-----DMEGLEAALNNNNVSLFFTESPT----NPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLN-QKAL 344 (541)
Q Consensus 277 v~~vd~~-----d~e~Le~al~~~~tklV~lesP~----NPtG~i~dl~~Ia~la~~--~gi~lIvDea~a~~~~-~~~~ 344 (541)
+..++.. |.+.+++++++ +||+|++.--. -|...+-+|+++.+++|+ .+++++|||+|+.+.. ..|.
T Consensus 131 Y~~v~L~~dg~~D~~~i~~~~~~-~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~ 209 (403)
T PF06838_consen 131 YREVPLTEDGTIDWEAIKKALKP-NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPT 209 (403)
T ss_dssp EEE--B-TTSSB-HHHHHHHHHT-TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GG
T ss_pred eEEEeecCCCCcCHHHHHHhhcc-CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCcc
Confidence 9988743 79999999997 59999996543 345555667777777776 4799999999999874 5788
Q ss_pred ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh------hcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 009167 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH------VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTAL 418 (541)
Q Consensus 345 ~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~------~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~ 418 (541)
+.|+|++..|+-|-.||.--..||+++++++++++...... ..|.++.. .-...+++---+..+.+..+-+.
T Consensus 210 ~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~--~R~~~QGlFlAP~vV~eAlKgai 287 (403)
T PF06838_consen 210 EVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGT--NRLMFQGLFLAPHVVGEALKGAI 287 (403)
T ss_dssp GGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTT--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcch--HHHHHhHHhhchHHHHHHHHHHH
Confidence 99999999999999988765679999999999998754322 23333332 22234455444444555556666
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccC
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI 478 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~ 478 (541)
..+..+++... +| .|.. +.+..+ -+-++++. +.+...+|.+.++.
T Consensus 288 f~A~~fe~lG~--~v-~P~~-~~~R~D----------iIQai~l~-~~e~l~~FC~~iQ~ 332 (403)
T PF06838_consen 288 FAAALFEKLGF--EV-SPKP-DDPRSD----------IIQAIELG-SPEKLIAFCQGIQA 332 (403)
T ss_dssp HHHHHHHHTT---EE-ES-T-TS--SS----------S-EEEE-S-SHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC--cC-CCCC-CCCCCc----------eEEEEECC-CHHHHHHHHHHHHh
Confidence 66677776532 12 2321 112222 25678885 56888888888764
No 269
>PLN02271 serine hydroxymethyltransferase
Probab=99.66 E-value=6.8e-14 Score=150.97 Aligned_cols=214 Identities=20% Similarity=0.157 Sum_probs=144.0
Q ss_pred CchhHHHH----HHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHH-----hhcccC
Q 009167 208 GNPTTVVV----EEKMSALEGAES-----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE-----TVLPKM 273 (541)
Q Consensus 208 ~~p~~~~L----e~~LA~l~g~e~-----~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~-----~~l~~~ 273 (541)
++...+++ .++..+++|.+. .+-.-||+.|+.+++.++++|||+|+..+..|++...... ......
T Consensus 188 G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~s 267 (586)
T PLN02271 188 GNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGA 267 (586)
T ss_pred CChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccc
Confidence 34444444 344556778543 3555699999999999999999999999999998543221 112334
Q ss_pred CeEEEEeC--C------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-----
Q 009167 274 GITATVID--P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----- 340 (541)
Q Consensus 274 Gi~v~~vd--~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~----- 340 (541)
|+.+..++ . .|.++|++.+...++|+|++....+| ..+|+++|.++|+++|+++++|.++..++.
T Consensus 268 G~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~ 345 (586)
T PLN02271 268 SIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKEC 345 (586)
T ss_pred cceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcC
Confidence 54433332 2 38899998444346999999777777 778999999999999999999999766543
Q ss_pred ccccccCCcEEEECCccccCCCCCceEEEEEeChH--------------------HHHHHHHHh--hhcCCCchHHHHHH
Q 009167 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------------------LVTQIRNLH--HVLGGALNPNAAYL 398 (541)
Q Consensus 341 ~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~--------------------li~~l~~~~--~~~G~~~s~~~a~l 398 (541)
.+|.. ++|+++.|+||++.|+. ||+++.+++ +.+++.... ...|+...-..+.+
T Consensus 346 ~sP~~-~aDvvt~TTHKtLrGPr---GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAal 421 (586)
T PLN02271 346 VNPFD-YCDIVTSTTHKSLRGPR---GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAAL 421 (586)
T ss_pred CCCCc-CCcEEEeCCcccCCCCC---ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHH
Confidence 34555 59999999999998875 577766543 333443221 12233222222222
Q ss_pred H--HH--hHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 399 I--IR--GMKTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 399 ~--l~--~l~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
+ +. .........++..+|++.|++.|.++
T Consensus 422 Avalkea~~~efk~Ya~QVv~NAkaLA~~L~~~ 454 (586)
T PLN02271 422 AIALKQVATPEYKAYMQQVKKNAQALASALLRR 454 (586)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC
Confidence 1 11 11234567788889999999999876
No 270
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.66 E-value=2.4e-14 Score=152.91 Aligned_cols=290 Identities=16% Similarity=0.124 Sum_probs=175.7
Q ss_pred CCchhHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHhcc----C-----CCEEEEcCCCCcchHHHHHhh-------
Q 009167 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALVP----A-----GGHIVTTTDCYRKTRIFIETV------- 269 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~-e~~i~~sSGs~Ai~~al~all~----p-----Gd~Vlv~~~~y~~~~~~~~~~------- 269 (541)
+.++...+|.++|.++.+. +.+++++||++|+..+++.... . ..+|+.....|++........
T Consensus 79 ~~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~ 158 (408)
T PRK04612 79 FYSAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQ 158 (408)
T ss_pred cCCHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccc
Confidence 4566777889999988754 5688889999999999874321 1 236888888888843211111
Q ss_pred --cccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc-----HHHHHHHHHhCCCEEEEeCCCCCC-Ccc
Q 009167 270 --LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-----VKLVSDLCHKKGAIVCIDGTFATP-LNQ 341 (541)
Q Consensus 270 --l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d-----l~~Ia~la~~~gi~lIvDea~a~~-~~~ 341 (541)
.....-.+..++..|++.+++++.++++.+|++|. .+++|.+++ +++|.++|++||+++|+||++... ...
T Consensus 159 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP-~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G 237 (408)
T PRK04612 159 EGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEP-IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG 237 (408)
T ss_pred cCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC
Confidence 01011124556777999999998754577777754 555654443 779999999999999999997532 111
Q ss_pred ---cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHH--HHHHHHHH
Q 009167 342 ---KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNST 416 (541)
Q Consensus 342 ---~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~--r~~~~~~~ 416 (541)
.....+.+..+.+++|.++++ ...|++++++++++.+...........+|..+.++...++.+.. ..++..+.
T Consensus 238 ~~~a~~~~~~~pdi~t~~K~l~~G--~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~ 315 (408)
T PRK04612 238 TLFAHWQEQVTPDIVTLAKALGGG--FPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQ 315 (408)
T ss_pred chhhhhhcCCCCCEEEEcchhcCC--CceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 111234445566789999853 45677788888777665432222222456766666666665532 23333344
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHHHHccCcCeecccCCcccccccC
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
.+++.+.|++... .++. ....+|.|.|+.+++... ...+..+.+.+...|+.+...
T Consensus 316 g~~l~~~l~~l~~----~~~~----------i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~--------- 372 (408)
T PRK04612 316 SAALRAGLEALNA----EFGV----------FAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQA--------- 372 (408)
T ss_pred HHHHHHHHHHHHh----hCCC----------eeeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeC---------
Confidence 4455555543210 0111 012356889999998532 234566777776555433211
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009167 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~~ 540 (541)
..+.||+...+ ++.+..++.|+++|.+
T Consensus 373 ------------------g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 373 ------------------GPDVLRFVPALNLTDAELADGLARLRLALAD 403 (408)
T ss_pred ------------------CCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 12568887543 5556667777776654
No 271
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.65 E-value=4.3e-14 Score=137.12 Aligned_cols=218 Identities=16% Similarity=0.239 Sum_probs=163.3
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC----
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
..|....+-+.||+++|.+.+-++.+.-+|-..++.+++++||.|++....|..++. .+++.|+++..|+..
T Consensus 59 ~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyv----AAEragl~v~eVp~tg~Pe 134 (382)
T COG1103 59 TKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYV----AAERAGLNVAEVPNTGYPE 134 (382)
T ss_pred cCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHH----HHHhcCCeEEecCCCCCCc
Confidence 457788888889999999766665555599999999999999999999999988763 456678888888742
Q ss_pred ---CHHHHHHhcc----C--CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEEE
Q 009167 284 ---DMEGLEAALN----N--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLH 353 (541)
Q Consensus 284 ---d~e~Le~al~----~--~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv~ 353 (541)
+++...+.|+ + ..+.+.++.+|....|.+.|.+.++++|+++|+++++..+|..+ .+.+..+.|+|+++.
T Consensus 135 y~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVg 214 (382)
T COG1103 135 YKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVG 214 (382)
T ss_pred eEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEe
Confidence 4555444442 2 24789999999999999999999999999999999999998865 456777889999999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHh---------hhcCCCchHHHHHHHHHhHHHHHHHHHHHH---HHHHHHH
Q 009167 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLH---------HVLGGALNPNAAYLIIRGMKTLHLRVQQQN---STALRMA 421 (541)
Q Consensus 354 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~---------~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~---~~a~~la 421 (541)
|.||.++..+ ..|++..+.++.+.+-+.. ..+|.+.-......++..+....+|+.+.. +.++++.
T Consensus 215 SGHKsmAAs~--PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv 292 (382)
T COG1103 215 SGHKSMAASA--PIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFV 292 (382)
T ss_pred cCccchhccC--CeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998766 5799998999887764322 134544322222223344555555555443 5677888
Q ss_pred HHHHhCCCce
Q 009167 422 KILEAHPKVK 431 (541)
Q Consensus 422 ~~L~~~p~v~ 431 (541)
+.|++..++.
T Consensus 293 ~elEkigg~~ 302 (382)
T COG1103 293 AELEKIGGVK 302 (382)
T ss_pred HHHHHhhhHH
Confidence 8888765443
No 272
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.65 E-value=8.5e-14 Score=148.20 Aligned_cols=235 Identities=11% Similarity=0.064 Sum_probs=148.4
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc------CC-CEEEEcCCCCcchH-HHHHhhcccC-----
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP------AG-GHIVTTTDCYRKTR-IFIETVLPKM----- 273 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~------pG-d~Vlv~~~~y~~~~-~~~~~~l~~~----- 273 (541)
+.++...+|.++|.+..+.+.+++++||++|+..+++.... +| ++||+.+..|++.. ..+ ......
T Consensus 75 ~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~ 153 (395)
T PRK03715 75 FYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATM-SASGKPGWDTI 153 (395)
T ss_pred ccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHH-hhcCCcccccC
Confidence 44566667777777765567899999999999999986531 23 57888888887742 222 111100
Q ss_pred ----CeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC----C--
Q 009167 274 ----GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----L-- 339 (541)
Q Consensus 274 ----Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~----~-- 339 (541)
-..+..++..|++++++.+.+ ++++|++|.+++..|.+.| +++|.++|++||+++|+||++... .
T Consensus 154 ~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~ 232 (395)
T PRK03715 154 FAPQVPGFPKAELNDIASVEKLITD-KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLF 232 (395)
T ss_pred CCCCCCCceeeCCchHHHHHHHcCC-CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchh
Confidence 011223345689999999976 4999999999888898887 999999999999999999997531 1
Q ss_pred cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-hhhcCCCchHHHHHHHHHhHHHHHH--HHHHHHHH
Q 009167 340 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-HHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNST 416 (541)
Q Consensus 340 ~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-~~~~G~~~s~~~a~l~l~~l~tl~~--r~~~~~~~ 416 (541)
........+|+++ ++|.++++ ...|.+++++++....... ...+ ..+|..+..++..++.+.. ..++..+.
T Consensus 233 a~~~~gv~PDi~t--~gK~lg~G--~p~~av~~~~~i~~~~~~~~~~T~--~g~pl~~aaala~L~~l~~~~l~~~~~~~ 306 (395)
T PRK03715 233 AYELSGIEPDIMT--LGKGIGGG--VPLAALLAKAEVAVFEAGDQGGTY--NGNPLMTAVGVAVISQLLAPGFLEGVRAR 306 (395)
T ss_pred hHhhcCCCCceee--ehhhhhCC--cceEEEEEccccccccCCCcCCCC--CCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 1122334568765 67999864 3467777777765211111 1112 2246666666666665542 23344444
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~ 464 (541)
..++.+.|++... .++ + ...+|.|.|+.+++..
T Consensus 307 g~~l~~~L~~l~~----~~~-i----------~~vrG~Glm~~i~l~~ 339 (395)
T PRK03715 307 GEYLKEKLLELSE----ERG-L----------EGERGEGLLRALLLGK 339 (395)
T ss_pred HHHHHHHHHHHhh----cCC-c----------CeEEcceeEEEEEecC
Confidence 5555555543210 011 1 1135678999999964
No 273
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.64 E-value=2.2e-14 Score=150.90 Aligned_cols=284 Identities=12% Similarity=0.054 Sum_probs=170.8
Q ss_pred hhHHHHHHHHHHHhCC-C--cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCH
Q 009167 210 PTTVVVEEKMSALEGA-E--STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~-e--~~i~~-sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~ 285 (541)
...++.++.++++++. + +++++ +||+.++++++.+++.+ +.+++..-.|+....-........+ ++..++....
T Consensus 41 ~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~ 118 (361)
T TIGR01366 41 NLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPG 118 (361)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccC-CceEEecCCC
Confidence 4677889999999997 2 35554 45889999999998743 3444445566554333323222233 4555543322
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCccccCCCCC
Q 009167 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHND 364 (541)
Q Consensus 286 e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~sK~lgg~gd 364 (541)
+.++..+.+ ++++|.+.+-.|.||.+.|+++| +|++|++++||.+++.+. +.+..+ +|++++|.+|+++++++
T Consensus 119 ~~~~~~~~~-~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~~G 192 (361)
T TIGR01366 119 SAPEPQADP-GVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASDGG 192 (361)
T ss_pred CCCCCccCC-CCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCCCc
Confidence 344444555 59999999999999999999988 588999999999977653 333332 89999999999999862
Q ss_pred ceEEEEEeChHHHHHHHHHhh---------------------hcCCCchHHHHHHHHHhHHHH------HHHHHHHHHHH
Q 009167 365 VLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL------HLRVQQQNSTA 417 (541)
Q Consensus 365 ~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~s~~~a~l~l~~l~tl------~~r~~~~~~~a 417 (541)
.++++.++++++++..... ....+++....+.+..+++.+ +.+.+++.+.+
T Consensus 193 --l~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~ 270 (361)
T TIGR01366 193 --LWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSS 270 (361)
T ss_pred --eEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 4556678877766542110 001222222222223333332 33445666777
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcc
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~ 497 (541)
+++.++|++.+.++.+ .+. +.+. ...-.+++| +.+ .....+.+.|+..++.+..|.
T Consensus 271 ~~l~~~l~~~~~~~~~-~~~----~~~~------s~~v~~v~~--~~g-~~~~~v~~~L~~~gI~i~~~~---------- 326 (361)
T TIGR01366 271 SRLYSWAQERPYATPF-VTD----PGKR------SQVVGTIDF--VDD-IDAATVAKILRANGIVDTEPY---------- 326 (361)
T ss_pred HHHHHHHHhCCCcccC-CCC----hhhc------ccceEEEEC--CCc-cCHHHHHHHHHHCCCeeccCc----------
Confidence 7888888887643211 111 1100 001134555 322 234455555655565543210
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 498 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
. .. .++.+|+|+...++++.++.|.++|+.
T Consensus 327 ---~--------~l--~~~~vRis~~~~~t~~di~~l~~al~~ 356 (361)
T TIGR01366 327 ---R--------KL--GRNQLRVAMFPAIDPDDVEALTECVDW 356 (361)
T ss_pred ---c--------cc--CCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence 0 01 245799999988888888888877764
No 274
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.64 E-value=1.5e-13 Score=147.74 Aligned_cols=258 Identities=13% Similarity=0.161 Sum_probs=160.9
Q ss_pred CCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHHHHhhccc---
Q 009167 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLPK--- 272 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g--~e~~i~~sSGs~Ai~~al~all~-------p-Gd~Vlv~~~~y~~~~~~~~~~l~~--- 272 (541)
.+.++...+|.++|+++.+ .+.+++++||++|+..+++.... + ..+||.....|++...........
T Consensus 81 ~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~ 160 (423)
T PRK05964 81 GFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGM 160 (423)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccc
Confidence 4667888899999999885 36788899999999999874321 2 357888888898843222111100
Q ss_pred ------CCeEEEEeC--CCC-----HHHHHHhccC--CCceEEEEeC-CCCCCCcccc----HHHHHHHHHhCCCEEEEe
Q 009167 273 ------MGITATVID--PAD-----MEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 273 ------~Gi~v~~vd--~~d-----~e~Le~al~~--~~tklV~les-P~NPtG~i~d----l~~Ia~la~~~gi~lIvD 332 (541)
....+..++ .+| ++++++.+.+ +++.+|++|. +.+..|...+ +++|.++|++||+++|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~D 240 (423)
T PRK05964 161 HALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFD 240 (423)
T ss_pred cccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 001122233 234 7888888842 2588999988 5777887765 889999999999999999
Q ss_pred CCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH----hhhcCCC--chHHHHHHHH
Q 009167 333 GTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVLGGA--LNPNAAYLII 400 (541)
Q Consensus 333 ea~a~~-~-----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~----~~~~G~~--~s~~~a~l~l 400 (541)
|++... . ........+|+++ ++|.++++. ...|++++++++.+.+... ...++.+ .++..+..++
T Consensus 241 Ev~tg~gr~G~~~a~~~~~v~pDi~~--~~K~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~ 317 (423)
T PRK05964 241 EIATGFGRTGTLFACEQAGVSPDIMC--LSKGLTGGY-LPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAAN 317 (423)
T ss_pred chhhCCCcCcchhHHHhcCCCCCeee--eehhhhcCc-ccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHH
Confidence 996422 1 1122233467765 679997653 2467788899988877531 1112322 3566666665
Q ss_pred HhHHHHH--HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH--HHHHHHHHHc
Q 009167 401 RGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDAL 476 (541)
Q Consensus 401 ~~l~tl~--~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~--~~~~~~l~~L 476 (541)
..++.+. ...++..+..+++.+.|++.. .+|.+ ...+|.|.|+.|++.+.. .....+...|
T Consensus 318 a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~-----~~~~i----------~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l 382 (423)
T PRK05964 318 ASLDLFEDEPVLERVAALSAGLAEGLEPFR-----DLPGV----------ADVRVLGAIGAVELDRPVLERDGPALRAFA 382 (423)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHhhc-----cCCCe----------EEeecccEEEEEEeccCcchhHHHHHHHHH
Confidence 5666443 233444455566666665431 12221 112457889999996532 1355666666
Q ss_pred cCcCe
Q 009167 477 KIPYI 481 (541)
Q Consensus 477 ~~~~i 481 (541)
...|+
T Consensus 383 ~~~Gv 387 (423)
T PRK05964 383 LERGV 387 (423)
T ss_pred HHCCe
Confidence 55554
No 275
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.63 E-value=2e-13 Score=140.42 Aligned_cols=285 Identities=17% Similarity=0.171 Sum_probs=176.7
Q ss_pred HHHHHHHHHhC----C----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-
Q 009167 214 VVEEKMSALEG----A----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (541)
Q Consensus 214 ~Le~~LA~l~g----~----e~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~- 283 (541)
+|...|.++.+ . +.-++.++| +.++..+++.++..||+|++...+|.+.. ...+..|+.+..|+.+
T Consensus 104 eLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL----~s~~a~gv~~ipv~md~ 179 (472)
T KOG0634|consen 104 ELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSAL----QSMEALGVKIIPVKMDQ 179 (472)
T ss_pred HHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHH----HhccccCceEEeccccC
Confidence 45555555544 1 234555566 59999999999999999999999998865 3456678888888754
Q ss_pred ---CHHHHHHhccCC--------CceEEEE-eCCCCCCCccccHH---HHHHHHHhCCCEEEEeCCCCCC----Cc----
Q 009167 284 ---DMEGLEAALNNN--------NVSLFFT-ESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATP----LN---- 340 (541)
Q Consensus 284 ---d~e~Le~al~~~--------~tklV~l-esP~NPtG~i~dl~---~Ia~la~~~gi~lIvDea~a~~----~~---- 340 (541)
++|.|++.+... +.+++|. -+-+||||..++++ +|.++|++|++++|+|+.|... +.
T Consensus 180 ~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~ 259 (472)
T KOG0634|consen 180 DGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLE 259 (472)
T ss_pred CCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCcc
Confidence 788888877532 2455554 33359999999866 8999999999999999995421 00
Q ss_pred -----c-----------cccc---cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHH------
Q 009167 341 -----Q-----------KALS---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNA------ 395 (541)
Q Consensus 341 -----~-----------~~~~---~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~------ 395 (541)
. ..+. .|..|-..||||.++++. +.||+.+++.+++++-.........++...
T Consensus 260 ~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGl--RlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a 337 (472)
T KOG0634|consen 260 LESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGL--RLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYA 337 (472)
T ss_pred ccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcc--eeEEeecCHHHHHHHhhhcceeecCcccccHHHHHH
Confidence 0 0111 244577889999999765 689999999888876544332211122222
Q ss_pred ---HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-eEEeCCCCCCCchhhhHhhhccCcccEEEEEEc-------
Q 009167 396 ---AYLIIRGMKTLHLRVQQQNSTALRMAKILEAH-PKV-KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD------- 463 (541)
Q Consensus 396 ---a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~-p~v-~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~------- 463 (541)
.|....-++.+..-.......+..+...|.++ |.- ..+..|. .|-++||+++
T Consensus 338 ~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~----------------aGmFiwv~i~~~~~~~~ 401 (472)
T KOG0634|consen 338 MLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPK----------------AGMFIWVEIPYINFDTK 401 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCC----------------cceEEEEEecccccccc
Confidence 22221112222222222223334444455443 443 3333332 5778899996
Q ss_pred CCHHHHHHHHHH-ccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHH
Q 009167 464 GDLTATIKFIDA-LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQ 536 (541)
Q Consensus 464 ~~~~~~~~~l~~-L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~ 536 (541)
....+.+.++.. +...|+-+-.|..+... |... -..-++|+|+...+.+++.+.+++
T Consensus 402 ~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~--p~~s--------------~~kiffRls~a~a~~e~l~~g~~r 459 (472)
T KOG0634|consen 402 KSINQIEEIIFIKAVKNGVKLVCGSWFMVD--PESS--------------WSKIFFRLSIAFAEPEKLDEGIER 459 (472)
T ss_pred cchHHHHHHHHHHHHHCCeEEecCceeEEc--CccC--------------CCcceEEEEeecCCHHHHHHHHHH
Confidence 343444444443 33457767777665442 2110 012389999999888877766654
No 276
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.63 E-value=1.8e-13 Score=148.19 Aligned_cols=291 Identities=14% Similarity=0.149 Sum_probs=179.2
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc--c--CC-CEEEEcCCCCcchHHHHHhhc---------
Q 009167 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--P--AG-GHIVTTTDCYRKTRIFIETVL--------- 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all--~--pG-d~Vlv~~~~y~~~~~~~~~~l--------- 270 (541)
+.++...+|.++|+++... +.+++++||++|+..+++... . .| ..||.....|++........-
T Consensus 121 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~ 200 (459)
T PRK11522 121 LLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPF 200 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCC
Confidence 4578888999999998754 467888999999999987432 1 12 468888888888432111110
Q ss_pred ccCCeEEEEeCCCCHHHHHHhccC-----CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC-C-
Q 009167 271 PKMGITATVIDPADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-L- 339 (541)
Q Consensus 271 ~~~Gi~v~~vd~~d~e~Le~al~~-----~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~-~- 339 (541)
....-.+..++..|.+++++.++. +++.+|++|......|.+.| ++++.++|++||+++|+||++... -
T Consensus 201 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRt 280 (459)
T PRK11522 201 MPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRT 280 (459)
T ss_pred CCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCcc
Confidence 011112344566688888887752 24789999999988898887 999999999999999999996321 1
Q ss_pred ----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc--hHHHHHHHHHhHHHHHH--HHH
Q 009167 340 ----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHL--RVQ 411 (541)
Q Consensus 340 ----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~--s~~~a~l~l~~l~tl~~--r~~ 411 (541)
.........|+++ ++|.+|++- ...|.+++++++.+.+......++.+. +|..+..++..++.+.. ..+
T Consensus 281 G~~~a~e~~gv~PDivt--~gK~lggG~-~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~ 357 (459)
T PRK11522 281 GKMFACEHENVQPDILC--LAKALGGGV-MPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPA 357 (459)
T ss_pred chhhhhhccCCCCCEEE--echhhhCCC-ccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHH
Confidence 1222233468875 899998641 235666677787776532111234444 67777666666766532 223
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccc
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
+..+..+++.+.|++.. -.+|.+ ....+|.|.|+.+++... +....+...+...|+-+...
T Consensus 358 ~~~~~g~~l~~~L~~l~----~~~~~~---------i~~VrG~Gl~~giel~~~-~~~~~i~~~l~~~Gvl~~~~----- 418 (459)
T PRK11522 358 QAEQKGDYLLDGFRQLA----REYPDL---------VQEARGKGMLMAIEFVDN-EIGYNFASEMFRQRVLVAGT----- 418 (459)
T ss_pred HHHHHHHHHHHHHHHHH----HhCCCc---------eeeEEeceeEEEEEecCc-hHHHHHHHHHHHCCeEEEec-----
Confidence 33344444555444320 012210 012356788999999643 44556666665555443311
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009167 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 539 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e----~~edli~dL~~AL~ 539 (541)
+...+.||+...+- +.+++++.|+++|+
T Consensus 419 --------------------~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~ 450 (459)
T PRK11522 419 --------------------LNNAKTIRIEPPLTLTIEQCEQVLKAARKALA 450 (459)
T ss_pred --------------------CCCCCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 01235788877653 44555566666554
No 277
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.63 E-value=4.2e-14 Score=149.87 Aligned_cols=215 Identities=19% Similarity=0.234 Sum_probs=150.2
Q ss_pred ccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe--
Q 009167 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI-- 280 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v-- 280 (541)
.|+ ++|+..+||+++++++|.+.++.++||+.|++++....++|||.| +.+.|..+.... ....|....-+
T Consensus 66 ~ya--g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ah---Ie~~Gav~vDi~~ 138 (450)
T TIGR02618 66 AYA--GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYH---QEKNGATFVDIII 138 (450)
T ss_pred hhc--CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHH---HHhCCeEEEeeec
Confidence 355 688999999999999999999999999999888777778999977 667776654331 12233322222
Q ss_pred C---------C----CCHHHHHHhccCC---CceEEEEeCCCCCC-Ccccc---HHHHHHHHHhCCCEEEEeCCCCC--C
Q 009167 281 D---------P----ADMEGLEAALNNN---NVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT--P 338 (541)
Q Consensus 281 d---------~----~d~e~Le~al~~~---~tklV~lesP~NPt-G~i~d---l~~Ia~la~~~gi~lIvDea~a~--~ 338 (541)
+ + .|+++|+++|++. ++++|.+++++|-. |.+++ +++|.++|++||++||.|.+... .
T Consensus 139 dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA 218 (450)
T TIGR02618 139 DEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENA 218 (450)
T ss_pred ccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhCh
Confidence 1 1 2899999999753 35688899999865 78854 78999999999999999999433 1
Q ss_pred C---------ccccc-------ccCCcEEEECCccccCCCCCceEEEEE-eChHHHHHHHHHhhhcCCC-----chHHHH
Q 009167 339 L---------NQKAL-------SLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGA-----LNPNAA 396 (541)
Q Consensus 339 ~---------~~~~~-------~~gaDivv~S~sK~lgg~gd~~gG~lv-~~~~li~~l~~~~~~~G~~-----~s~~~a 396 (541)
+ ...+. -..+|.++.|+.|-.+.+ +||+++ .+++++++++.....+++. ++....
T Consensus 219 ~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~---~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~ 295 (450)
T TIGR02618 219 YFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVN---IGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDM 295 (450)
T ss_pred hhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCC---CceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhH
Confidence 1 11122 225899999999998876 478887 6788999988876555432 222121
Q ss_pred HHHHHhHHHHH--HHHHHHHHHHHHHHHHHHhC
Q 009167 397 YLIIRGMKTLH--LRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 397 ~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~~ 427 (541)
..+..+++..- ...+....++++|++.|.+.
T Consensus 296 ~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~ 328 (450)
T TIGR02618 296 EAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA 328 (450)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 12223444322 23344456789999999886
No 278
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.61 E-value=2e-13 Score=147.12 Aligned_cols=293 Identities=16% Similarity=0.140 Sum_probs=172.1
Q ss_pred CCCCchhHHHHHHHHHHHhC-C-CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhh-c-----c-cC
Q 009167 205 GRYGNPTTVVVEEKMSALEG-A-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV-L-----P-KM 273 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g-~-e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~-l-----~-~~ 273 (541)
+.+.++...+|.++|+++.+ . +.+++++||++|+..+++.. .....+|+..+..|++........ . . .+
T Consensus 81 ~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 160 (433)
T PRK08117 81 GVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYY 160 (433)
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccC
Confidence 34577888999999999983 3 45566689999999999742 223467888888887733211000 0 0 00
Q ss_pred C---eEEEEeCC-----------------CCHHHHHHhcc----CCCceEEEEeCCCCCCCcccc----HHHHHHHHHhC
Q 009167 274 G---ITATVIDP-----------------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (541)
Q Consensus 274 G---i~v~~vd~-----------------~d~e~Le~al~----~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~ 325 (541)
+ -.+.+++. .+++++++.++ .+++.+|++|......|.+.+ +++|.++|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~ 240 (433)
T PRK08117 161 QPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRH 240 (433)
T ss_pred CCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHc
Confidence 0 01122221 14556666653 235889999999988899988 99999999999
Q ss_pred CCEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHH
Q 009167 326 GAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI 399 (541)
Q Consensus 326 gi~lIvDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~ 399 (541)
|+++|+||++... .. ........|+ .+++|.+++ | ...|++++++++++.+...........+|..+..+
T Consensus 241 g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi--~t~sK~lg~-G-~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa 316 (433)
T PRK08117 241 GILLIFDEVQTGFGRTGEWFAAQTFGVVPDI--MTIAKGIAS-G-LPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAA 316 (433)
T ss_pred CCEEEEecchhccCccccchhHhhcCCCCCE--eehhhhccC-C-CcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHH
Confidence 9999999997642 11 1111223455 579999985 3 45788889988887764322111122356666666
Q ss_pred HHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-----HHHHHHH
Q 009167 400 IRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LTATIKF 472 (541)
Q Consensus 400 l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-----~~~~~~~ 472 (541)
+..++.+.. ..++..+..+++.+.|++... .+|.. ...+|.|.++++++..+ ......+
T Consensus 317 ~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~----------~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~ 382 (433)
T PRK08117 317 LATLEVIKEEKLLDNANEMGAYALERLEVLKE----KHPVI----------GDVRGIGLMIGIEIVDPDGEPDGDAVEKI 382 (433)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh----cCCce----------eeeecCCcEEEEEEecCCCCcchHHHHHH
Confidence 666665431 223333334444444443210 11210 12356788999998531 2334555
Q ss_pred HHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009167 473 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 473 l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~~ 540 (541)
.+.+...|+.+... +...+.+||+..+ ++.++.++.|.+++++
T Consensus 383 ~~~l~~~Gv~~~~~-------------------------g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 383 LDKCLEKGLLFYLC-------------------------GNAGNVLRMIPPLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred HHHHHHCCCEEeec-------------------------CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 55555444322110 1124689998654 3445555666665543
No 279
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.61 E-value=2.6e-13 Score=145.73 Aligned_cols=258 Identities=14% Similarity=0.141 Sum_probs=155.6
Q ss_pred cCCCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhhc-----ccC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----PKM 273 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~~~l-----~~~ 273 (541)
+..+.++...+|.++|+++.+. +.+++++||++|+..+++... ....+|+.....|++........- .+.
T Consensus 77 ~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 156 (421)
T PRK09792 77 YQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKI 156 (421)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCccccc
Confidence 4445678888999999998752 568889999999999987432 233578888888888422111110 011
Q ss_pred C-----eEEEEeCC----------CCHHHHHHhcc----CCCceEEEEeCCCCCCCccc-c---HHHHHHHHHhCCCEEE
Q 009167 274 G-----ITATVIDP----------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVC 330 (541)
Q Consensus 274 G-----i~v~~vd~----------~d~e~Le~al~----~~~tklV~lesP~NPtG~i~-d---l~~Ia~la~~~gi~lI 330 (541)
+ ..+..++. .+++.+++.++ .+++++|++|..++++|... | +++|.++|++||+++|
T Consensus 157 ~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK09792 157 GFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMI 236 (421)
T ss_pred CCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 1 01222222 13477887775 23589999999999999765 6 8899999999999999
Q ss_pred EeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH
Q 009167 331 IDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (541)
Q Consensus 331 vDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~ 404 (541)
+||++... .. ........|+ .+++|.++++ ...|++++++++++.+...........+|..+..++..++
T Consensus 237 ~DEv~tg~gr~G~~~a~~~~~~~pDi--~t~gK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~ 312 (421)
T PRK09792 237 ADEVQSGFARTGKLFAMDHYADKPDL--MTMAKSLAGG--MPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLN 312 (421)
T ss_pred EeccccCCCCCCchhHHHhcCCCCcE--EEeehhhcCC--CceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence 99996532 11 1112234675 4589999854 4678889998888776532211112234555554444444
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH------HHHHHH
Q 009167 405 TLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL------TATIKF 472 (541)
Q Consensus 405 tl~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~------~~~~~~ 472 (541)
.+.. .+++..+..+++.+.|+. +|.+ .+.+|.|.+++++++++. .....+
T Consensus 313 ~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v------------------~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l 374 (421)
T PRK09792 313 IIDKESLCERANQLGQRLKNTLIDAKESVPAI------------------AAVRGLGSMIAAEFNDPQTGEPSAAIAQKI 374 (421)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCc------------------ceecccceEEEEEecCCccCCcchHHHHHH
Confidence 4321 112222223333333332 2321 123567899999996431 234556
Q ss_pred HHHccCcCeec
Q 009167 473 IDALKIPYIAP 483 (541)
Q Consensus 473 l~~L~~~~iav 483 (541)
...+...|+.+
T Consensus 375 ~~~~~~~Gv~i 385 (421)
T PRK09792 375 QQRALAQGLLL 385 (421)
T ss_pred HHHHHHCCcEE
Confidence 66655555433
No 280
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.60 E-value=1.6e-13 Score=147.52 Aligned_cols=287 Identities=17% Similarity=0.182 Sum_probs=178.6
Q ss_pred CCchhHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhh-------cc-c--C
Q 009167 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV-------LP-K--M 273 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~-g~e~~i~~sSGs~Ai~~al~all~--pGd~Vlv~~~~y~~~~~~~~~~-------l~-~--~ 273 (541)
+.++...+|.++|+++. +.+.+++++||++|+..+++.... .+++||..++.|++........ +. . .
T Consensus 87 ~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 166 (426)
T PRK00062 87 APTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSP 166 (426)
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCC
Confidence 45677789999999886 346788899999999999986433 3678999999999854222111 00 0 0
Q ss_pred Ce------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCc-
Q 009167 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN- 340 (541)
Q Consensus 274 Gi------~v~~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~- 340 (541)
+. ....++..|++++++.+.. +++++|++|.....+|.+.+ +++|.++|++||+++|+||++.....
T Consensus 167 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g 246 (426)
T PRK00062 167 GVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVA 246 (426)
T ss_pred CCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccC
Confidence 11 1233455688999888752 25889999977777899988 89999999999999999999753211
Q ss_pred ----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-hcC--CCchHHHHHHHHHhHHHHHH--HHH
Q 009167 341 ----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTLHL--RVQ 411 (541)
Q Consensus 341 ----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G--~~~s~~~a~l~l~~l~tl~~--r~~ 411 (541)
........|+ .+++|.++++ ..+|++++++++++.+..... ..+ ...++..+..++..++.+.. ..+
T Consensus 247 ~~~~~~~~~~~pDi--~~~gK~l~~G--~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~ 322 (426)
T PRK00062 247 LGGAQGYYGVTPDL--TTLGKIIGGG--LPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYE 322 (426)
T ss_pred CccHHHHhCCCcch--HhhhhHhhCC--CcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHH
Confidence 1112223465 4689999853 346777888888887753211 111 23456666666666665543 334
Q ss_pred HHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC------------HHHHHHHHHH
Q 009167 412 QQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFIDA 475 (541)
Q Consensus 412 ~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~------------~~~~~~~l~~ 475 (541)
+..+...++.+.|++ ++.+.. .+|.|.|+.+++..+ ...+..+.+.
T Consensus 323 ~~~~~~~~~~~~l~~~~~~~~~~~~------------------vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~ 384 (426)
T PRK00062 323 ELEALTKRLAEGLKEAAKKAGIPLT------------------VNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHA 384 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceE------------------EEEecceEEEEEecCCCcchhhhccccHHHHHHHHHH
Confidence 444445555555542 332211 134688999988531 1234567777
Q ss_pred ccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 476 LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 476 L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
|...|+-+...+. + .-.+.+.+..++.+++++.|++++.+
T Consensus 385 l~~~Gv~v~~~~~------~-------------------~~~~~~~~t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 385 MLDEGVYLAPSQF------E-------------------AGFVSAAHTDEDIEKTLEAARKAFAA 424 (426)
T ss_pred HHHCCeEeecCCc------C-------------------ceeeeccCCHHHHHHHHHHHHHHHHh
Confidence 7665654432211 0 01123334446667777777777765
No 281
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.59 E-value=5.9e-13 Score=143.16 Aligned_cols=289 Identities=15% Similarity=0.169 Sum_probs=170.1
Q ss_pred CCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc-----cCC--
Q 009167 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP-----KMG-- 274 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l~-----~~G-- 274 (541)
+.++...+|.+.|+++.+. +..++++||++|+..+++.. ......||...+.|++........-. ..|
T Consensus 81 ~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~ 160 (425)
T PRK08088 81 LAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMG 160 (425)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCC
Confidence 4467777889999988764 47889999999888887643 22345677778899885433222100 001
Q ss_pred -----eEEEEeC--CC------CHHHHHHhcc----CCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeC
Q 009167 275 -----ITATVID--PA------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDG 333 (541)
Q Consensus 275 -----i~v~~vd--~~------d~e~Le~al~----~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDe 333 (541)
+....++ .. +++.|++.++ .+++++|++|...+..|.+.+ +++|.++|++||+++|+||
T Consensus 161 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~De 240 (425)
T PRK08088 161 LMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE 240 (425)
T ss_pred CCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1111111 11 1556887775 235889999888755566555 8899999999999999999
Q ss_pred CCCCC-Ccccc--c-ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--
Q 009167 334 TFATP-LNQKA--L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH-- 407 (541)
Q Consensus 334 a~a~~-~~~~~--~-~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~-- 407 (541)
++... ..... . ..+.+.-+.|++|.++++ ...|++++++++++.+...........++..+..+...++...
T Consensus 241 v~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G--~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~ 318 (425)
T PRK08088 241 VQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGG--FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQE 318 (425)
T ss_pred cccCCCcCcchhHHhhcCCCCCEEEEeccccCC--CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 97642 11111 1 223444467899999853 4689999999998887654333333345666666665555432
Q ss_pred HHHHHHHHHHHHHHHHH----HhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-------CHHHHHHHHHHc
Q 009167 408 LRVQQQNSTALRMAKIL----EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DLTATIKFIDAL 476 (541)
Q Consensus 408 ~r~~~~~~~a~~la~~L----~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-------~~~~~~~~l~~L 476 (541)
..+++..+..+++.+.| .++|.+..+ +|.|.++|+++.. +......+...+
T Consensus 319 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v------------------~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~ 380 (425)
T PRK08088 319 NLLQKANALGEKLKDGLLAIAEKHPEIGDV------------------RGLGAMIAIELFEDGDHSKPNAKLTAQIVARA 380 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------eccceEEEEEEecCCCCCCCCHHHHHHHHHHH
Confidence 11222222223333333 223333222 3457899999942 123456677666
Q ss_pred cCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC----HHHHHHHHHHHHhh
Q 009167 477 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED----FEDLKADVLQALHA 540 (541)
Q Consensus 477 ~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~----~edli~dL~~AL~~ 540 (541)
...++.+..++ ...+.|||++.... .+..++.|.++|++
T Consensus 381 ~~~Gv~~~~~~-------------------------~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 381 RDKGLILLSCG-------------------------PYYNVLRILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred HhCCCEEecCC-------------------------CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 55553322110 11367999998543 33445555555543
No 282
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=1e-12 Score=141.98 Aligned_cols=254 Identities=14% Similarity=0.156 Sum_probs=155.6
Q ss_pred CCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhc-------ccC
Q 009167 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL-------PKM 273 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l-------~~~ 273 (541)
.+.++...+|.++|+++.+. +.+.+++||++|+..+++.. .....+||.....|++.......+- ..+
T Consensus 81 ~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~ 160 (445)
T PRK08593 81 YMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKY 160 (445)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCC
Confidence 35678889999999999853 35677799999999999742 2223578888888888432111110 001
Q ss_pred C---eEEEEeCCCC-----------------HHHHHHhcc----CCCceEEEEeCCCCCCCcccc----HHHHHHHHHhC
Q 009167 274 G---ITATVIDPAD-----------------MEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (541)
Q Consensus 274 G---i~v~~vd~~d-----------------~e~Le~al~----~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~ 325 (541)
+ ..+..++..+ ++++++.+. .+++.+|++|.+.+..|.+.+ +++|.++|++|
T Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~ 240 (445)
T PRK08593 161 GPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH 240 (445)
T ss_pred CCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 1 1122232111 134444442 235899999999988888876 88999999999
Q ss_pred CCEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHH
Q 009167 326 GAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI 399 (541)
Q Consensus 326 gi~lIvDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~ 399 (541)
|+++|+||++... .. ........|+++ ++|.++++ ..+|++++++++++.+......+....+|..+..+
T Consensus 241 g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t--~gK~l~~G--~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa 316 (445)
T PRK08593 241 GILFAVDDIQQGLGRTGKWSSISHFNITPDLMS--FGKSLAGG--MPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAA 316 (445)
T ss_pred CCEEEEechhhCCCcCchHHHHHhcCCCCCEee--ecccccCC--cccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHH
Confidence 9999999996421 11 112233467764 89999853 45788999999888775322222333456666666
Q ss_pred HHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-------H
Q 009167 400 IRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------L 466 (541)
Q Consensus 400 l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-------~ 466 (541)
+..++.+.. ..++..+..+++.+.|++ +|.+.. .+|.|.++.+++..+ .
T Consensus 317 ~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~------------------vrG~Gl~~gi~l~~~~~~~~~~~ 378 (445)
T PRK08593 317 LATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGD------------------VRGYGLSIGIDIVSDKKLKTRDN 378 (445)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEE------------------EeccceEEEEEEecCCCcCCCcH
Confidence 666655432 233333444445555543 333322 356788988888531 2
Q ss_pred HHHHHHHHHccCcCe
Q 009167 467 TATIKFIDALKIPYI 481 (541)
Q Consensus 467 ~~~~~~l~~L~~~~i 481 (541)
.....+...+...|+
T Consensus 379 ~~~~~~~~~~~~~Gv 393 (445)
T PRK08593 379 EAALKICNYCFEHGV 393 (445)
T ss_pred HHHHHHHHHHHHCCe
Confidence 334556666654453
No 283
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=1.3e-12 Score=141.05 Aligned_cols=252 Identities=14% Similarity=0.156 Sum_probs=154.2
Q ss_pred CchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchH-HHHHh-hc----c-cCC--
Q 009167 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTR-IFIET-VL----P-KMG-- 274 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~-~~~~~-~l----~-~~G-- 274 (541)
.++...+|.++|+++.+. +.+++++||++|+..+++.. .....+|+.-...|++.. ..+.. .. . .++
T Consensus 82 ~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 161 (443)
T PRK08360 82 FPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGEL 161 (443)
T ss_pred CcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCC
Confidence 467778899999998865 46788899999999998743 223457888787887742 11110 00 0 011
Q ss_pred eEEEEeCC-----------------CCHHHHHHhcc----CCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEE
Q 009167 275 ITATVIDP-----------------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIV 329 (541)
Q Consensus 275 i~v~~vd~-----------------~d~e~Le~al~----~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~l 329 (541)
..+.+++. .+++.+++.+. .+++++|++|...||+|.+.+ +++|.++|++||+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~ll 241 (443)
T PRK08360 162 SDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILL 241 (443)
T ss_pred CCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 11222221 12344556553 235999999987899998876 789999999999999
Q ss_pred EEeCCCCCC-Ccc-----cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH
Q 009167 330 CIDGTFATP-LNQ-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM 403 (541)
Q Consensus 330 IvDea~a~~-~~~-----~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l 403 (541)
|+||++... ... .......|++ +++|.++++ ...|++++++++++.+...........++..+..++..+
T Consensus 242 I~DEv~~g~gr~G~~~a~~~~~~~pDii--tlsK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l 317 (443)
T PRK08360 242 VVDEVQSGLGRTGKWFAIEHFGVEPDII--TLGKPLGGG--LPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVI 317 (443)
T ss_pred EEeccccCCCcCccchhhhhcCCCCCEE--EecccccCC--ceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHH
Confidence 999997632 111 1122345766 479999953 467889999988887754322222334566666666666
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-------HHHHH
Q 009167 404 KTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATI 470 (541)
Q Consensus 404 ~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-------~~~~~ 470 (541)
+.+.. ..++..+..+++.+.|++ +|.+. +.+|.|.|+.+++..+ ...+.
T Consensus 318 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~------------------~vrg~Gl~~gie~~~~~~~~~~~~~~~~ 379 (443)
T PRK08360 318 EEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIG------------------DVRGIGLMIGVDLVKDRETKERAYEEAA 379 (443)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCee------------------eeeccceEEEEEEecCCcccCccHHHHH
Confidence 55432 223333344444444433 22222 2356788999998532 12345
Q ss_pred HHHHHccCcCe
Q 009167 471 KFIDALKIPYI 481 (541)
Q Consensus 471 ~~l~~L~~~~i 481 (541)
.+...+...|+
T Consensus 380 ~~~~~l~~~Gi 390 (443)
T PRK08360 380 KVVWRAWELGL 390 (443)
T ss_pred HHHHHHHHCCe
Confidence 56666655454
No 284
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.59 E-value=1.3e-12 Score=140.33 Aligned_cols=261 Identities=14% Similarity=0.124 Sum_probs=157.5
Q ss_pred cCCCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhc-----ccC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL-----PKM 273 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l-----~~~ 273 (541)
+..+.++...+|.++|+++.+. +.+++++||++|+..+++.. .....+|+.....|++........- ...
T Consensus 70 ~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~ 149 (420)
T TIGR00700 70 FMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKS 149 (420)
T ss_pred ccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCccccc
Confidence 3445677788899999998742 56888899999999998743 2234578888888888432211110 011
Q ss_pred Ce-----EEEEeCCC----------------CHHHHHHhcc----CCCceEEEEeCCCCCCCcccc----HHHHHHHHHh
Q 009167 274 GI-----TATVIDPA----------------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (541)
Q Consensus 274 Gi-----~v~~vd~~----------------d~e~Le~al~----~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~ 324 (541)
+. .+..++.. +++.+++.+. .+++.+|++|.....+|.+++ +++|.++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~ 229 (420)
T TIGR00700 150 GFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCRE 229 (420)
T ss_pred CCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHH
Confidence 11 12222210 2456666652 235899999999888898876 8899999999
Q ss_pred CCCEEEEeCCCCCCC-c-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHH
Q 009167 325 KGAIVCIDGTFATPL-N-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 398 (541)
Q Consensus 325 ~gi~lIvDea~a~~~-~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l 398 (541)
||+++|+||++.... . ........|+++ ++|.+++ | ...|++++++++++.+...........++..+..
T Consensus 230 ~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aa 305 (420)
T TIGR00700 230 HGIVFIADEVQTGFARTGAMFACEHEGPEPDLIT--TAKSLAD-G-LPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAA 305 (420)
T ss_pred cCCEEEEEecccCCcccchhHHHhhcCCCCCEEE--eeccccC-C-cceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHH
Confidence 999999999975431 1 112233467665 8999984 3 5688899999988877532221122234666665
Q ss_pred HHHhHHHHHH--HHHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC------CH
Q 009167 399 IIRGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG------DL 466 (541)
Q Consensus 399 ~l~~l~tl~~--r~~~~~~~a~~la~~L~----~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~------~~ 466 (541)
++..++.+.. ..++..+..+++.+.|+ .+|.+..+ +|.|.++++++.. +.
T Consensus 306 a~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v------------------rg~G~~~~i~~~~~~~~~~~~ 367 (420)
T TIGR00700 306 ALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDV------------------RGLGAMIAVELVDPGTTEPDA 367 (420)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEe------------------eccceEEEEEEecCCCCCccH
Confidence 5555544321 11222222333444333 23333222 4568899998832 12
Q ss_pred HHHHHHHHHccCcCeecccC
Q 009167 467 TATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 467 ~~~~~~l~~L~~~~iavS~G 486 (541)
+...++++.+...++.+..|
T Consensus 368 ~~~~~l~~~~~~~Gv~i~p~ 387 (420)
T TIGR00700 368 GLAERIATAAHAAGLLLLTC 387 (420)
T ss_pred HHHHHHHHHHHHCCeEEecc
Confidence 34566776666566655443
No 285
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.59 E-value=4.5e-13 Score=142.16 Aligned_cols=281 Identities=16% Similarity=0.191 Sum_probs=177.0
Q ss_pred hhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcch-HHHHHh---hc------ccCC
Q 009167 210 PTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKT-RIFIET---VL------PKMG 274 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~-~~~~~~---~l------~~~G 274 (541)
+...++.++|.++... +.+++++||++|+.++++.. ...+..||.....|++. ...+.. .. ..+.
T Consensus 99 e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~ 178 (447)
T COG0160 99 EPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLP 178 (447)
T ss_pred hhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCC
Confidence 6777888999988765 45888899999999999743 23346788888888773 222211 00 1111
Q ss_pred eEEEEeCCC-----------------CHHHHHHhccC-----CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCE
Q 009167 275 ITATVIDPA-----------------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (541)
Q Consensus 275 i~v~~vd~~-----------------d~e~Le~al~~-----~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~ 328 (541)
-.+..++.. ..+.++..+.. .++.++++|......|.+.+ ++++.++|++||++
T Consensus 179 ~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gil 258 (447)
T COG0160 179 PGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGIL 258 (447)
T ss_pred CCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 223333311 12335554421 25889999999999998887 78999999999999
Q ss_pred EEEeCCCCC----C--CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH--HhhhcCCCchHHHHHHHH
Q 009167 329 VCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHHVLGGALNPNAAYLII 400 (541)
Q Consensus 329 lIvDea~a~----~--~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~--~~~~~G~~~s~~~a~l~l 400 (541)
+|+||++.. + +.........||++ ++|.+++ | ...|.+++++++.+ ... ....+++ +|.++..++
T Consensus 259 lI~DEVQtG~GRTG~~fa~E~~gv~PDivt--~aK~ig~-G-~Pl~avv~r~ei~~-~~~g~~~~Tf~G--Npva~Aaa~ 331 (447)
T COG0160 259 LIADEVQTGFGRTGKMFAFEHFGVEPDIVT--LAKSLGG-G-LPLSAVVGRAEIMD-WPPGGHGGTFGG--NPVACAAAL 331 (447)
T ss_pred EEEeccccCCCccccchhhhhcCCCCCEEE--ecccccC-C-CceeEEeccHHhcc-cCCcccCCCCCc--CHHHHHHHH
Confidence 999999653 1 22233334578988 8899997 3 46788888988877 322 2223343 566666666
Q ss_pred HhHHHHHHH--HHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-------CHH
Q 009167 401 RGMKTLHLR--VQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DLT 467 (541)
Q Consensus 401 ~~l~tl~~r--~~~~~~~a~~la~~L~----~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-------~~~ 467 (541)
..|+.++.. +++..+.-+++.+.|. ++|.|. +.+|.|.|+.+++.. +.+
T Consensus 332 AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~Ig------------------dVRG~Glm~giE~v~d~~t~~p~~~ 393 (447)
T COG0160 332 AVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIG------------------DVRGLGLMIGVELVKDRDTKEPDAE 393 (447)
T ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCcee------------------cccccceEEEEEEecCCCCCCCCHH
Confidence 666654321 2222222333333333 233332 236788999999863 235
Q ss_pred HHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhh
Q 009167 468 ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALHA 540 (541)
Q Consensus 468 ~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG----~e~~edli~dL~~AL~~ 540 (541)
...++++.+...|+-+.. .|...+.|||..- .|+.+..++.|+++|..
T Consensus 394 ~~~~i~~~~~~~Glil~~-------------------------~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 394 LAAKIVARAFERGLLLLT-------------------------CGPHGNVLRILPPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred HHHHHHHHHHHcCCEEec-------------------------cCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 677788777665542221 1234567887654 46677778888888764
No 286
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=1.7e-12 Score=139.45 Aligned_cols=288 Identities=14% Similarity=0.154 Sum_probs=174.4
Q ss_pred cCCCCchhHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc-------
Q 009167 204 YGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP------- 271 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g---~e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l~------- 271 (541)
+..+.++...+|.++|+++.+ .+.+++++||++|+..+++.. .....+|+.....|++........-.
T Consensus 77 ~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~ 156 (421)
T PRK06777 77 YQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKV 156 (421)
T ss_pred ccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCccccc
Confidence 344567778889999999875 257888999999999998743 22345788888888885322211100
Q ss_pred cCC---eEEEEeCCC----------CHHHHHHhcc----CCCceEEEEeCCCCCCCcc-cc---HHHHHHHHHhCCCEEE
Q 009167 272 KMG---ITATVIDPA----------DMEGLEAALN----NNNVSLFFTESPTNPFLRC-VD---VKLVSDLCHKKGAIVC 330 (541)
Q Consensus 272 ~~G---i~v~~vd~~----------d~e~Le~al~----~~~tklV~lesP~NPtG~i-~d---l~~Ia~la~~~gi~lI 330 (541)
.++ -.+..++.. +++.+++.++ .+++.+|++|...+..|.. .| +++|.++|++||+++|
T Consensus 157 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK06777 157 GFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLI 236 (421)
T ss_pred CCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 000 011122211 2566777664 2358899999998888854 45 8899999999999999
Q ss_pred EeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH
Q 009167 331 IDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (541)
Q Consensus 331 vDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~ 404 (541)
+||++... .. ........|++ +++|.+++ | ...|++++++++++.+...........++..+..++..|+
T Consensus 237 ~DEv~tg~gr~g~~~~~~~~~~~pDiv--~~sK~l~~-G-~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 312 (421)
T PRK06777 237 ADEVQTGFARTGKLFAMEYYDVKPDLI--TMAKSLGG-G-MPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLD 312 (421)
T ss_pred EechhhCCccCCchhhhhhcCCCCCEE--eeehhhcC-C-CceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99996532 11 11122336766 58999984 3 4678899998888776543221112235666666666665
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC------HHHHHHH
Q 009167 405 TLH--LRVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTATIKF 472 (541)
Q Consensus 405 tl~--~r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~------~~~~~~~ 472 (541)
.+. ..+++..+..+++.+.|++ +|.+. ..+|.|.++.+++... .+....+
T Consensus 313 ~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrg~G~~~~i~~~~~~~~~~~~~~~~~l 374 (421)
T PRK06777 313 VIAEEKLCQRALILGAHLVEVLEKAKASCPAIV------------------DIRARGSMVAVEFNDPQTGKPSPEFTRQY 374 (421)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeE------------------EecCceEEEEEEEecCccCCccHHHHHHH
Confidence 443 2233444445555555544 22222 2256788998887532 1234555
Q ss_pred HHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHH
Q 009167 473 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQAL 538 (541)
Q Consensus 473 l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL 538 (541)
...+...++.+..++. ..+.|||...+ ++.++.++.|+++|
T Consensus 375 ~~~~~~~Gv~i~~~~~-------------------------~g~~lr~~ppl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 375 QRQALEEGLLLLSCGV-------------------------HGNVIRFLYPLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred HHHHHhCCeEEeecCC-------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 5555555655544322 12578888754 34455555555554
No 287
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.58 E-value=1.2e-12 Score=140.13 Aligned_cols=284 Identities=13% Similarity=0.081 Sum_probs=167.2
Q ss_pred CCchhHHHHHHHHHHHh--C--CC-cEEEe-CCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhh------ccc
Q 009167 207 YGNPTTVVVEEKMSALE--G--AE-STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV------LPK 272 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~--g--~e-~~i~~-sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~~~------l~~ 272 (541)
+.++...+|.++|+++. + .. ...++ +||++|+..+++... ....+||.....|++........ -..
T Consensus 75 ~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~ 154 (412)
T TIGR02407 75 MATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQG 154 (412)
T ss_pred cCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccC
Confidence 34677778888998874 2 22 35554 799999999987542 23467888888888843221111 011
Q ss_pred CC---eEEEEeCC--------CCHHHHHHhccC-----CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEe
Q 009167 273 MG---ITATVIDP--------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 273 ~G---i~v~~vd~--------~d~e~Le~al~~-----~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvD 332 (541)
++ ..+..++. ++++.+++.+.+ +++.+|++|...++.|.+.+ +++|.++|++||+++|+|
T Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 234 (412)
T TIGR02407 155 AGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVD 234 (412)
T ss_pred CCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 11 12333433 246778887752 24789999999999998654 779999999999999999
Q ss_pred CCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCC--chHHHHHHHHHhHH
Q 009167 333 GTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMK 404 (541)
Q Consensus 333 ea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~--~s~~~a~l~l~~l~ 404 (541)
|++... +.........|+++ ++|.+++.| ...|++++++++ +.+... ..+.+ .++..+..+...++
T Consensus 235 EV~tG~GRtG~~~a~~~~~v~PDi~~--~~K~lg~~G-~pigav~~~~~~-~~~~~~--~~~~T~~gnpl~~aaa~a~l~ 308 (412)
T TIGR02407 235 DIQAGCGRTGTFFSFEPAGIEPDIVC--LSKSISGYG-LPLALTLIKPEL-DVWKPG--EHNGTFRGNNLAFVTATAALE 308 (412)
T ss_pred chhhCCCccchhHHhcccCCCCCEEE--echhccCCc-cceeEEEEchhh-hccCCC--ccCCCCCccHHHHHHHHHHHH
Confidence 997521 11233345678776 679998744 457888887765 433211 12222 24454444444444
Q ss_pred H-HHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc
Q 009167 405 T-LHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK 477 (541)
Q Consensus 405 t-l~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~ 477 (541)
. +.. ..++..+..+++.+.|+. ++.+. ...+|.|.+++++++.. +....+...+.
T Consensus 309 ~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~-----------------~~vrg~Gl~~~l~l~~~-~~~~~~~~~~~ 370 (412)
T TIGR02407 309 YYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELI-----------------KQVRGRGLMQGIECGDG-DLAGKIAKAAF 370 (412)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCce-----------------EeeecceeEEEEEecCh-HHHHHHHHHHH
Confidence 2 211 122222333444444432 22110 11245788999999743 45567777776
Q ss_pred CcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 478 IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 478 ~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
..|+.+... +..++.||++..+-.+++.++.+.++|+
T Consensus 371 ~~Gv~v~~~-------------------------~~~~~~lr~~p~l~~t~~~i~~~~~~l~ 407 (412)
T TIGR02407 371 ENGLIIETS-------------------------GPNDEVIKLLPPLTIDEETLQQGLDILE 407 (412)
T ss_pred HCCCEEecc-------------------------CCCCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 656544321 1124679998887555555555544443
No 288
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.57 E-value=1.1e-12 Score=141.00 Aligned_cols=288 Identities=13% Similarity=0.115 Sum_probs=172.1
Q ss_pred CCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhh------c-ccC
Q 009167 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV------L-PKM 273 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~------l-~~~ 273 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++.. .....+|+.....|++.......+ . ..+
T Consensus 79 ~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 158 (425)
T PRK07495 79 VVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGF 158 (425)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCC
Confidence 56778888899999998753 46888899999999998743 233467888888888843211110 0 001
Q ss_pred C---eEEEEeCCC----------CHHHHHHhcc----CCCceEEEEeCCCCCCCccc-c---HHHHHHHHHhCCCEEEEe
Q 009167 274 G---ITATVIDPA----------DMEGLEAALN----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 274 G---i~v~~vd~~----------d~e~Le~al~----~~~tklV~lesP~NPtG~i~-d---l~~Ia~la~~~gi~lIvD 332 (541)
+ ..+..++.. +++++++.++ .+++++|++|.....+|.+. | +++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~D 238 (425)
T PRK07495 159 GAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIAD 238 (425)
T ss_pred CCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1 122333322 1455566653 23589999988876677554 3 779999999999999999
Q ss_pred CCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHH
Q 009167 333 GTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL 406 (541)
Q Consensus 333 ea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl 406 (541)
|++... .. ........|+ .+++|.++++ ...|++++++++++.+...........+|..+..++..++.+
T Consensus 239 Ev~tG~gr~G~~~a~~~~gv~pDi--~tlsK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l 314 (425)
T PRK07495 239 EVQTGFARTGKLFAMEHHEVAADL--TTMAKGLAGG--FPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVI 314 (425)
T ss_pred chhhcCCcCCCceeecccCCCCCE--EeehhhhcCC--ccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHH
Confidence 996532 11 1112223455 5589999854 467889999888877653222122234566666555555554
Q ss_pred HH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC------HHHHHHHHH
Q 009167 407 HL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTATIKFID 474 (541)
Q Consensus 407 ~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~------~~~~~~~l~ 474 (541)
.. ..++..+..+++.+.|++ +|.+.. .+|.|.++++++..+ ......+..
T Consensus 315 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~ 376 (425)
T PRK07495 315 EEEDLCERANQLGNRLKQRLASLRETVPEIAD------------------IRGPGFMNAVEFNDADSGLPSAEFANRVRL 376 (425)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHhhCCCeee------------------eecCceEEEEEEecCCCCCccHHHHHHHHH
Confidence 32 122333344444444443 222222 245788999999532 122445555
Q ss_pred HccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHhh
Q 009167 475 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 475 ~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlS----vG~e~~edli~dL~~AL~~ 540 (541)
.+...|+-+... |...+.|||. +..++.++.++.|+++|++
T Consensus 377 ~~~~~Gvl~~~~-------------------------g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~ 421 (425)
T PRK07495 377 KALEKGLILLTC-------------------------GVHGNVIRFLAPITIQDDVFAEALDILEASILE 421 (425)
T ss_pred HHHHCCeEEeec-------------------------CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 555445433211 1113567776 4456677778888888765
No 289
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=6.1e-13 Score=136.00 Aligned_cols=221 Identities=22% Similarity=0.244 Sum_probs=151.6
Q ss_pred CCccCCC--CchhHHHH----HHHHHHHhCCCc-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009167 201 SFEYGRY--GNPTTVVV----EEKMSALEGAES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 201 ~~~Y~R~--~~p~~~~L----e~~LA~l~g~e~-~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
+|..-|| +...++++ .++..+++|++. .+--.||+.|+.+++.++++|||.|+-.+..+++...--.. ....
T Consensus 57 GyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~~-v~~s 135 (413)
T COG0112 57 GYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSP-VNFS 135 (413)
T ss_pred CCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCCC-CCcc
Confidence 4444443 34444444 445557889975 45567999999999999999999999999988884321100 1111
Q ss_pred C--eEEEEe--C----CCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCC-----CCCCc
Q 009167 274 G--ITATVI--D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-----ATPLN 340 (541)
Q Consensus 274 G--i~v~~v--d----~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~-----a~~~~ 340 (541)
| .++... | ..|.|++++.+.+.++|+|+.-. +-.-..+|++++.++|++.|++|++|-++ +.+..
T Consensus 136 G~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~--SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~ 213 (413)
T COG0112 136 GKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGG--SAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVH 213 (413)
T ss_pred ceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECc--cccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccC
Confidence 2 222222 2 12889999888777799998722 34567889999999999999999999994 34566
Q ss_pred ccccccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHh--hhcCCCchHHHHHH---HHHhHH-HHHHHHHHH
Q 009167 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLH--HVLGGALNPNAAYL---IIRGMK-TLHLRVQQQ 413 (541)
Q Consensus 341 ~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~--~~~G~~~s~~~a~l---~l~~l~-tl~~r~~~~ 413 (541)
++|+.+ +|+|+.|.||.|.|+. ||++..++ ++.+++.... ...|+.+.-..+.. ..+.++ .+....++.
T Consensus 214 p~P~~~-AdvVTtTTHKTlrGPr---GG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qV 289 (413)
T COG0112 214 PNPLPH-ADVVTTTTHKTLRGPR---GGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQV 289 (413)
T ss_pred CCCCCc-cceEeCCcccCCCCCC---ceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 788888 9999999999999884 89999885 7888877532 22232211111111 112222 235666778
Q ss_pred HHHHHHHHHHHHhCC
Q 009167 414 NSTALRMAKILEAHP 428 (541)
Q Consensus 414 ~~~a~~la~~L~~~p 428 (541)
.+|++.|++.|.++.
T Consensus 290 v~NAkaLAe~l~~~G 304 (413)
T COG0112 290 VKNAKALAEALKERG 304 (413)
T ss_pred HHHHHHHHHHHHHcC
Confidence 899999999998853
No 290
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.56 E-value=9.4e-13 Score=152.54 Aligned_cols=289 Identities=15% Similarity=0.143 Sum_probs=177.9
Q ss_pred hHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHh----ccCCC----EEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALEGAESTVIMASGM-SASTVMLLAL----VPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e~~i~~sSGs-~Ai~~al~al----l~pGd----~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...++++.|++++|.+.+-+..+|+ ++..+.+.++ .++|| .|++++..|++.... +...|++++.++
T Consensus 543 ~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~s----a~~~G~~vv~v~ 618 (954)
T PRK05367 543 LIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPAS----AVMAGMKVVVVA 618 (954)
T ss_pred HHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHH----HHHCCCEEEEEC
Confidence 3457899999999998776666554 5554444332 35665 599999999886543 345688888886
Q ss_pred CC-----CHHHHHHhccCC--CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC--CcccccccCCcEEE
Q 009167 282 PA-----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVL 352 (541)
Q Consensus 282 ~~-----d~e~Le~al~~~--~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~--~~~~~~~~gaDivv 352 (541)
.+ |+++|+++++++ ++.+|++.+|++-.+...|+++|+++||++|+++++|.++... ....+.+.|+|+++
T Consensus 619 ~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~ 698 (954)
T PRK05367 619 CDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSH 698 (954)
T ss_pred CCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEE
Confidence 43 789999998653 4778888888865334478999999999999999999998532 23456688999999
Q ss_pred ECCccccCCCC---CceEEEEEeChHHHHHHHHHh----h---hcCCCc-hHH---------HHHHHHHhHHHHHHHHHH
Q 009167 353 HSATKFIGGHN---DVLAGSISGSGKLVTQIRNLH----H---VLGGAL-NPN---------AAYLIIRGMKTLHLRVQQ 412 (541)
Q Consensus 353 ~S~sK~lgg~g---d~~gG~lv~~~~li~~l~~~~----~---~~G~~~-s~~---------~a~l~l~~l~tl~~r~~~ 412 (541)
.|+||+|+.+- +.-.|++..++.+...+.... . ..|... ++. ..|+..-|.+.+....++
T Consensus 699 ~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~ 778 (954)
T PRK05367 699 LNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEV 778 (954)
T ss_pred ecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Confidence 99999975221 122567776655443332211 0 011111 111 112222344555666666
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEE-EEcCC-HHHHHHHHHHccCcCeecccCCccc
Q 009167 413 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF-EVDGD-LTATIKFIDALKIPYIAPSFGGCES 490 (541)
Q Consensus 413 ~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf-~l~~~-~~~~~~~l~~L~~~~iavS~G~~~s 490 (541)
...++.++++.|+++.. +.|++-...-. ...++.+ .++.. ......+.++|...|+....
T Consensus 779 ~~~~A~Yl~~~L~~~~~---~~~~~~~~~~~----------~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t----- 840 (954)
T PRK05367 779 AILNANYIAKRLKDHYP---VLYTGANGRVA----------HECILDLRPLKESTGITVDDIAKRLIDYGFHAPT----- 840 (954)
T ss_pred HHHHHHHHHHHHHhhcC---ccccCCCCCcc----------cceEEEeecccccCCCCHHHHHHHHHHCCCeEee-----
Confidence 66788888888876422 22322100001 1235555 23311 12345666666554432111
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 491 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 491 l~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
++ +.+ ++.+||++...+.++.+++|.++|.+
T Consensus 841 -------~~-----------~pv-~~~l~i~ptE~~s~~elDr~~~al~~ 871 (954)
T PRK05367 841 -------MS-----------FPV-AGTLMVEPTESESKAELDRFCDAMIA 871 (954)
T ss_pred -------cC-----------Ccc-CCEEEEEeeecCCHHHHHHHHHHHHH
Confidence 10 011 56899999987777778888877764
No 291
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.56 E-value=2.5e-12 Score=138.99 Aligned_cols=289 Identities=15% Similarity=0.133 Sum_probs=172.5
Q ss_pred CCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc-----cCC-
Q 009167 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP-----KMG- 274 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l~-----~~G- 274 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++.. ....++||.....|++........-. +.+
T Consensus 95 ~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~ 174 (443)
T PRK06058 95 VTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGF 174 (443)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCccccccc
Confidence 34567788899999998753 46788899999999998732 23347899999999885422111100 001
Q ss_pred ----eEEEEeC----CCC---------------HHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCC
Q 009167 275 ----ITATVID----PAD---------------MEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGA 327 (541)
Q Consensus 275 ----i~v~~vd----~~d---------------~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi 327 (541)
-.+..++ ..+ ++.+++.+..+++.+|++|..+...|.+.| +++|.++|++||+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gi 254 (443)
T PRK06058 175 GPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGV 254 (443)
T ss_pred CCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 0111111 111 233444443335899999877766676665 8899999999999
Q ss_pred EEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHH
Q 009167 328 IVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR 401 (541)
Q Consensus 328 ~lIvDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~ 401 (541)
++|.||++... .. ........|+++ ++|.++++ ...|++++++++++.+...........+|..+..++.
T Consensus 255 llI~DEV~tGfgRtG~~fa~~~~gv~PDiv~--~gK~l~~G--~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a 330 (443)
T PRK06058 255 VFIADEVQTGFARTGAWFACEHEGIVPDLIT--TAKGIAGG--LPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALA 330 (443)
T ss_pred EEEEeccccCCCcChhhhHHHhcCCCCCEEE--EcccccCC--CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHH
Confidence 99999996532 11 122233468887 57999853 4678888898888776533211112235666666666
Q ss_pred hHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC------HHHH
Q 009167 402 GMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTAT 469 (541)
Q Consensus 402 ~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~------~~~~ 469 (541)
.++.+.. ..++..+..+++.+.|++ ++.+. +.+|.|.|+.+++..+ .+..
T Consensus 331 ~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrg~G~~~~i~~~~~~~~~~~~~~~ 392 (443)
T PRK06058 331 AIETIEEDDLVARARQIEALMTDRLRALAAEDDRIG------------------DVRGRGAMIAIELVKPGTTEPDAELT 392 (443)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEE------------------eeeccceEEEEEEecCCCCCCcHHHH
Confidence 6665432 122233334444444443 22222 2356788999998432 2345
Q ss_pred HHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhhC
Q 009167 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHAI 541 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~~i 541 (541)
..+++.+...|+.+..++. ..+.||+...+ ++.++.++.|+++|+++
T Consensus 393 ~~l~~~~~~~Gv~~~~~~~-------------------------~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 393 KALAAAAHAAGVIVLTCGT-------------------------YGNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred HHHHHHHHHCCeEEeccCC-------------------------CCCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 6666666555655433211 12467776443 45566667777777653
No 292
>PRK05965 hypothetical protein; Provisional
Probab=99.55 E-value=2.8e-12 Score=139.12 Aligned_cols=289 Identities=16% Similarity=0.164 Sum_probs=173.7
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHHHHhh------c
Q 009167 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETV------L 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~-------p-Gd~Vlv~~~~y~~~~~~~~~~------l 270 (541)
+.++...+|.++|+++.+. +.+++++||++|+..+++.... + ..+||.....|++........ -
T Consensus 87 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~ 166 (459)
T PRK05965 87 FGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFH 166 (459)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhh
Confidence 4577778899999998753 5677778999999999974321 2 357898898998843211011 0
Q ss_pred ccCCe---EEEEeCC---------CC--------HHHHHHhccC---CCceEEEEeCCCCCCCcccc----HHHHHHHHH
Q 009167 271 PKMGI---TATVIDP---------AD--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 271 ~~~Gi---~v~~vd~---------~d--------~e~Le~al~~---~~tklV~lesP~NPtG~i~d----l~~Ia~la~ 323 (541)
..++. .+..++. .| ++++++.+.. +++.+|++|......|.+.+ +++|.++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~ 246 (459)
T PRK05965 167 RGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACR 246 (459)
T ss_pred cccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHH
Confidence 01110 1112211 23 2567777742 35899999999888887765 779999999
Q ss_pred hCCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-----hhcCC--C
Q 009167 324 KKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGG--A 390 (541)
Q Consensus 324 ~~gi~lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-----~~~G~--~ 390 (541)
+||+++|.||++... +.........||++ +.|.++|+- +..|.+++++++.+.+.... ..++. .
T Consensus 247 ~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~ 323 (459)
T PRK05965 247 ELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT--VAKGLTSGY-VPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYS 323 (459)
T ss_pred HcCCEEEEechhccCccCchhhhHhhcCCCCCeEE--echhhccCC-cceeEEEEcHHHHHHHhccccccccccccCCCC
Confidence 999999999995422 12233344578988 789998642 24677788888887764210 01222 2
Q ss_pred chHHHHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH--
Q 009167 391 LNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-- 466 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r--~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-- 466 (541)
-+|..+..++..|+.+... .++..+.-.++.+.|++. . .+|.+ ...+|.|.|+.+++..+.
T Consensus 324 gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l---~--~~~~v----------~~vrG~Gl~~gie~~~~~~~ 388 (459)
T PRK05965 324 AHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDAL---R--AHPLV----------GDVRGRGLLGALELVADKAT 388 (459)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhh---c--cCCCE----------EEEeecceEEEEEEeccccc
Confidence 3567777666666655321 222223333444444331 1 12211 234678999999985321
Q ss_pred --------HHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHH
Q 009167 467 --------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADV 534 (541)
Q Consensus 467 --------~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlS----vG~e~~edli~dL 534 (541)
....++...+...|+-+... ..+.||+. +..++.+.+++.|
T Consensus 389 ~~~~~~~~~~~~~i~~~~~~~Gll~~~~---------------------------g~~~i~~~PpL~it~~ei~~~~~~l 441 (459)
T PRK05965 389 KTPFDAALDPADRIFDRAYANGLVFRAF---------------------------GDGVLGFAPALCCTEGEFDLIFERT 441 (459)
T ss_pred cCCCCchhHHHHHHHHHHHhCCeEEEec---------------------------CCcEEEEECCCcCCHHHHHHHHHHH
Confidence 12445555555445432210 13467777 5556777777778
Q ss_pred HHHHhh
Q 009167 535 LQALHA 540 (541)
Q Consensus 535 ~~AL~~ 540 (541)
+++|++
T Consensus 442 ~~~l~~ 447 (459)
T PRK05965 442 RKTLDD 447 (459)
T ss_pred HHHHHH
Confidence 777764
No 293
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.55 E-value=3e-12 Score=140.10 Aligned_cols=240 Identities=13% Similarity=0.127 Sum_probs=147.5
Q ss_pred CCchhHHHHHHHHHHHhC-C--CcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCCcchHHHHHhhc-----
Q 009167 207 YGNPTTVVVEEKMSALEG-A--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTRIFIETVL----- 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g-~--e~~i~~sSGs~Ai~~al~all-------~pG-d~Vlv~~~~y~~~~~~~~~~l----- 270 (541)
+.++...+|.++|.+++. . +.+++++||++|+..+++... ++| ..||..+..|++.......+-
T Consensus 130 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~ 209 (504)
T PLN02760 130 RTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPAL 209 (504)
T ss_pred cCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhh
Confidence 456778899999998853 3 357888999999999998652 122 578888888888431110100
Q ss_pred -ccCCe---EEEEeCCC----------C--------HHHHHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHHHH
Q 009167 271 -PKMGI---TATVIDPA----------D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (541)
Q Consensus 271 -~~~Gi---~v~~vd~~----------d--------~e~Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia~l 321 (541)
..++. .+..++.. + .++|++.+. ++++.+|++|......|.+.| +++|.++
T Consensus 210 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~l 289 (504)
T PLN02760 210 HQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAV 289 (504)
T ss_pred ccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 01111 02222210 1 134666653 225889999999888898888 9999999
Q ss_pred HHhCCCEEEEeCCCC-CCCc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-----hhcCCC
Q 009167 322 CHKKGAIVCIDGTFA-TPLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGA 390 (541)
Q Consensus 322 a~~~gi~lIvDea~a-~~~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-----~~~G~~ 390 (541)
|++||+++|+||++. .+.. .......+|+++ ++|.++++. +..|.+++++++++.+.... ...+.+
T Consensus 290 c~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivt--lgK~lggG~-~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T 366 (504)
T PLN02760 290 LKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVS--LAKALSSAY-MPIGAVLVSPEISDVIHSQSNKLGSFAHGFT 366 (504)
T ss_pred HHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEE--ecccccCCc-cccceEeecHHHHhhhhcccccccCcccCCC
Confidence 999999999999963 2111 222334478766 899998642 23566788888888775310 011212
Q ss_pred --chHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC
Q 009167 391 --LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 391 --~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~ 464 (541)
-+|..+..++..|+.+.. ..++..+..+++.+.|++. .+ +|. ....+|.|.|+.+++..
T Consensus 367 ~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l---~~--~~~----------v~~vrG~Gl~~gie~~~ 429 (504)
T PLN02760 367 YSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAF---SG--SPI----------IGEIRGTGLILGTEFVD 429 (504)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH---hc--CCC----------eeeEEeCceEEEEEEec
Confidence 257777777777766543 2333344445555555432 11 121 12346789999999853
No 294
>PRK06105 aminotransferase; Provisional
Probab=99.55 E-value=2e-12 Score=140.20 Aligned_cols=242 Identities=14% Similarity=0.152 Sum_probs=151.3
Q ss_pred cCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc------c-C-CCEEEEcCCCCcchHHHHHhh----
Q 009167 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV------P-A-GGHIVTTTDCYRKTRIFIETV---- 269 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all------~-p-Gd~Vlv~~~~y~~~~~~~~~~---- 269 (541)
++++.++...+|.++|+++.+. +.+++++||++|+.++++... . + ..+||.....|++........
T Consensus 86 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~ 165 (460)
T PRK06105 86 FSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLP 165 (460)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCc
Confidence 4456788888999999999754 567888999999999998532 1 2 357888888888743111000
Q ss_pred --cccCCe---EEEEeCCC------------------CHHHHHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHH
Q 009167 270 --LPKMGI---TATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVS 319 (541)
Q Consensus 270 --l~~~Gi---~v~~vd~~------------------d~e~Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia 319 (541)
-+.++. .+..++.. ..+++++.+. .+++.+|++|......|.+.+ +++|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr 245 (460)
T PRK06105 166 NNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQ 245 (460)
T ss_pred ccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 001111 12222211 1355676663 235899999999888888877 88999
Q ss_pred HHHHhCCCEEEEeCCCC-CCC-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-----hcC
Q 009167 320 DLCHKKGAIVCIDGTFA-TPL-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-----VLG 388 (541)
Q Consensus 320 ~la~~~gi~lIvDea~a-~~~-----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-----~~G 388 (541)
++|++||+++|+||++. .+. .........|+++ ++|.++++. ...|++++++++.+.+..... .++
T Consensus 246 ~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~--~gK~lggG~-~P~~av~~~~~i~~~~~~~~~~~~~~~h~ 322 (460)
T PRK06105 246 AVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILV--MSKQLSSSY-QPLSAVLMNEKVYDPIADESGKIGTFGHG 322 (460)
T ss_pred HHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeee--eecccccCc-ccceEEEEcHHHHHHHhcccccCcccccC
Confidence 99999999999999963 221 1222334578886 889998642 347888888888877653211 012
Q ss_pred --CCchHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 389 --GALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 389 --~~~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
...+|..+..++..|+.+.. .+++..+..+++.+.|++. . .+|. -.+.+|.|.|+.|++.
T Consensus 323 ~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l---~--~~~~----------v~~vrG~Gl~~gie~~ 386 (460)
T PRK06105 323 FTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL---A--DHPL----------VGEVRGVGLIAAVELV 386 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh---h--cCCC----------eEEEEecceEEEEEEe
Confidence 23457777776667766543 2333334444444444432 1 1221 1234678899999985
No 295
>PRK15029 arginine decarboxylase; Provisional
Probab=99.55 E-value=3e-13 Score=152.31 Aligned_cols=176 Identities=14% Similarity=0.139 Sum_probs=134.6
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC---
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
+.....+.++..|+++|++.+.++++|+ .+|.+++++++++||.|++++++|.+.+..+ ...|+..+++.+.
T Consensus 203 p~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al----~L~ga~Pvyl~P~~~~ 278 (755)
T PRK15029 203 HTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGL----ILTGAKPVYMVPSRNR 278 (755)
T ss_pred CCcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHH----HHcCCeEEEecccccc
Confidence 4456788999999999999999999998 7899999999999999999999999977543 3346666666421
Q ss_pred -------C-----HHHHHHhccCC-Cce--------EEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC---
Q 009167 284 -------D-----MEGLEAALNNN-NVS--------LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL--- 339 (541)
Q Consensus 284 -------d-----~e~Le~al~~~-~tk--------lV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~--- 339 (541)
+ ++.++++++.+ .++ ++++.+|+ ..|.+.|+++|+++||++|++|+|||+++..+
T Consensus 279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~ 357 (755)
T PRK15029 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFN 357 (755)
T ss_pred cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHHHHHHHhcCCeEEEECccccccccC
Confidence 3 78898888542 134 89998887 67999999999999999999999999977533
Q ss_pred ---cc-ccc-----c-cCCc-EEEECCccccCCCCCceEEEEEeChH--H--HHHHHHHhhhcCCC
Q 009167 340 ---NQ-KAL-----S-LGAD-LVLHSATKFIGGHNDVLAGSISGSGK--L--VTQIRNLHHVLGGA 390 (541)
Q Consensus 340 ---~~-~~~-----~-~gaD-ivv~S~sK~lgg~gd~~gG~lv~~~~--l--i~~l~~~~~~~G~~ 390 (541)
+. .++ . .|+| +++.|.||.+++.. .+.++-.+.. . .++++.....+.++
T Consensus 358 ~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alT--QaS~LHv~~~~~~id~~r~~~~l~~~qST 421 (755)
T PRK15029 358 PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATT 421 (755)
T ss_pred ccccccccccccccccCCCceEEEEchhhcccchh--hhhhheeCCCccccCHHHHHHHHHHHcCC
Confidence 11 223 3 6898 99999999998765 4555554322 1 24666655555543
No 296
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.55 E-value=9.6e-13 Score=137.52 Aligned_cols=222 Identities=20% Similarity=0.263 Sum_probs=150.2
Q ss_pred CCCccCCCCchhHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhc------
Q 009167 200 ASFEYGRYGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL------ 270 (541)
Q Consensus 200 ~~~~Y~R~~~p~~~~Le~~LA~l~g~-e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l------ 270 (541)
.+..|+. +...--++.+.|.++.+. +.+-+++||++|...+++.- ....|+|+...-+|++....+-.-.
T Consensus 84 ~G~~fg~-Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t 162 (432)
T COG0001 84 RGLSFGA-PTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAAT 162 (432)
T ss_pred hcCCCCC-CCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCccc
Confidence 3566775 444444667888888887 88999999999999988743 2345899999999998654332111
Q ss_pred ----ccCCe------EEEEeCCCCHHHHHHhccCC--CceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCC
Q 009167 271 ----PKMGI------TATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 271 ----~~~Gi------~v~~vd~~d~e~Le~al~~~--~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea 334 (541)
...|+ .+..++.+|++++++++++. ++.+|++|....-.|.+.| +++|.++|+++|++||.||+
T Consensus 163 ~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEV 242 (432)
T COG0001 163 LGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEV 242 (432)
T ss_pred CCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecc
Confidence 11122 34456678999999999753 6899999988777788877 77999999999999999999
Q ss_pred CCCC-----CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhh-cCCCc--hHHHHHHHHHhHHHH
Q 009167 335 FATP-----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-LGGAL--NPNAAYLIIRGMKTL 406 (541)
Q Consensus 335 ~a~~-----~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~-~G~~~--s~~~a~l~l~~l~tl 406 (541)
...+ -.+......+|+.+ +.|.+||+ +..|++.++.++++.+...... .++++ +|.........++.+
T Consensus 243 iTGFR~~~gGaq~~~gi~PDltt--lGKiIGGG--lP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l 318 (432)
T COG0001 243 ITGFRVALGGAQGYYGVEPDLTT--LGKIIGGG--LPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEEL 318 (432)
T ss_pred hhhcccCCcccccccCcCcchhh--hhhhhcCC--cceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHH
Confidence 4321 12334444567766 89999965 4789999999999977654332 22333 344433333344444
Q ss_pred HH---HHHHHHHHHHHHHHHHHh
Q 009167 407 HL---RVQQQNSTALRMAKILEA 426 (541)
Q Consensus 407 ~~---r~~~~~~~a~~la~~L~~ 426 (541)
.. -.++..+..++|.+.|++
T Consensus 319 ~~~~~~y~~l~~~~~~L~~gl~~ 341 (432)
T COG0001 319 MTEEGVYERLDALGERLAEGLRA 341 (432)
T ss_pred HhcccHHHHHHHHHHHHHHHHHH
Confidence 32 244555566666666654
No 297
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.54 E-value=2.8e-12 Score=138.61 Aligned_cols=288 Identities=12% Similarity=0.145 Sum_probs=171.9
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHH-H--------H
Q 009167 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIF-I--------E 267 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~-------p-Gd~Vlv~~~~y~~~~~~-~--------~ 267 (541)
+.++...+|.++|+++.+. +.+.+++||++|+..+++.... + ..+||.....|++.... + .
T Consensus 89 ~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~ 168 (445)
T PRK09221 89 MGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNR 168 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhh
Confidence 5678888999999998753 6788899999999999874321 1 35788888888884211 1 0
Q ss_pred hhcccCCeEEEEeCCC------------------CHHHHHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHHHHH
Q 009167 268 TVLPKMGITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 268 ~~l~~~Gi~v~~vd~~------------------d~e~Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia~la 322 (541)
..+......+..++.. .++++++.++ .+++.+|++|......|.+.| +++|.++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc 248 (445)
T PRK09221 169 KMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREIC 248 (445)
T ss_pred hccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHH
Confidence 0011111112222211 1356666664 135889999999988899888 99999999
Q ss_pred HhCCCEEEEeCCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-------hhhcCC
Q 009167 323 HKKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGG 389 (541)
Q Consensus 323 ~~~gi~lIvDea~a~~-~-----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-------~~~~G~ 389 (541)
++||+++|+||++... - .........|+++ ++|.++++. ...|.+++++++++.+... ......
T Consensus 249 ~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 325 (445)
T PRK09221 249 DKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIIT--FAKGLTNGA-IPMGAVIASDEIYDAFMQGPEYAIEFFHGYTY 325 (445)
T ss_pred HHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEE--eccccccCc-ccceeeEEcHHHHHhhccCcccccccccccCC
Confidence 9999999999996421 1 1222233458776 889997642 2356677888888776421 111112
Q ss_pred CchHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC--
Q 009167 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-- 465 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-- 465 (541)
..+|..+..++..++.+.. .+++..+..+++.+.|++.. .+|.+ .+.+|.|.++.+++...
T Consensus 326 ~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~-----~~~~v----------~~vrg~Gl~~~v~~~~~~~ 390 (445)
T PRK09221 326 SAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLK-----GLPHV----------IDIRNIGLVAGIELAPRPG 390 (445)
T ss_pred CcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-----cCCCE----------EEEecCceEEEEEEecccc
Confidence 2356666666666665532 23344444555555555421 12211 12356788888888531
Q ss_pred --HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009167 466 --LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 466 --~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~ 539 (541)
......+.+.+...|+-+..+ .+.|||+..+ ++.+.+++.|+++|.
T Consensus 391 ~~~~~~~~~~~~~~~~Gv~~~~~----------------------------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~ 442 (445)
T PRK09221 391 APGARGYEAFMKCFEKGLLVRYT----------------------------GDTIALSPPLIIEKAQIDELVDALGDALR 442 (445)
T ss_pred cccchHHHHHHHHHHCCeEEeec----------------------------CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 122345555555445433211 2468887554 455666666666665
Q ss_pred h
Q 009167 540 A 540 (541)
Q Consensus 540 ~ 540 (541)
+
T Consensus 443 ~ 443 (445)
T PRK09221 443 A 443 (445)
T ss_pred h
Confidence 4
No 298
>PRK12403 putative aminotransferase; Provisional
Probab=99.54 E-value=3.2e-12 Score=138.69 Aligned_cols=235 Identities=18% Similarity=0.222 Sum_probs=144.9
Q ss_pred CchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc-------cCCCE-EEEcCCCCcch-HHHHHhh-c---cc
Q 009167 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PAGGH-IVTTTDCYRKT-RIFIETV-L---PK 272 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all-------~pGd~-Vlv~~~~y~~~-~~~~~~~-l---~~ 272 (541)
.++...+|.++|+++.+. +.+++++||++|+..+++... ++++. |+.....|++. ...+... . ..
T Consensus 96 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~ 175 (460)
T PRK12403 96 THPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHE 175 (460)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccc
Confidence 567788999999999873 678999999999999998653 23333 55556667763 2111100 0 00
Q ss_pred CC---eEEEEeCCC-----------------CHHHHHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHHHHHHhC
Q 009167 273 MG---ITATVIDPA-----------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (541)
Q Consensus 273 ~G---i~v~~vd~~-----------------d~e~Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~ 325 (541)
.+ -.+..++.. +.+++++.+. .+++.+|++|......|.+.+ +++|.++|++|
T Consensus 176 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~ 255 (460)
T PRK12403 176 MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY 255 (460)
T ss_pred cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc
Confidence 00 012222210 1245655552 135889999999888898887 99999999999
Q ss_pred CCEEEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCC--chHHH
Q 009167 326 GAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGA--LNPNA 395 (541)
Q Consensus 326 gi~lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~--~s~~~ 395 (541)
|+++|+||++... +.........|+++ ++|.++++- ...|.+++++++.+.+..... .++.+ .+|..
T Consensus 256 g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lggG~-~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~ 332 (460)
T PRK12403 256 DVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTSGY-VPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVA 332 (460)
T ss_pred CCEEEEeccccCCCcCchhhhhhhcCCCCCeEE--Ecccccccc-cceEEEEECHHHHHHHhcCCCccccCCCCCCCHHH
Confidence 9999999996421 11222334468887 899998642 134556678888777643111 12323 46777
Q ss_pred HHHHHHhHHHHHH--HHHHHH-HHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 396 AYLIIRGMKTLHL--RVQQQN-STALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 396 a~l~l~~l~tl~~--r~~~~~-~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
+..++..|+.+.. .+++.. +..+++.+.|++ +|.+. +.+|.|.|+.+++.
T Consensus 333 ~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrG~Gl~~gie~~ 389 (460)
T PRK12403 333 AAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVG------------------EVQGAGLVAALQFA 389 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEE------------------eEeecceEEEEEEc
Confidence 7777777766542 123332 344455554442 33222 23578899999995
No 299
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.54 E-value=1.9e-12 Score=150.05 Aligned_cols=159 Identities=22% Similarity=0.305 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh-ccC--CCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHH
Q 009167 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (541)
Q Consensus 212 ~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~al-l~p--Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e 286 (541)
..++++.++++.|.+ ++-++.+++++.+.+++++ +++ +|+|++++.+|+.+...++..++..|++++.++..+
T Consensus 123 l~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~-- 200 (954)
T PRK05367 123 LLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK-- 200 (954)
T ss_pred HHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--
Confidence 446789999999985 4577778887777777665 445 489999999999998888777888999999988643
Q ss_pred HHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCC-CCCCcccccccCCcEEEECCccc-----cC
Q 009167 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKF-----IG 360 (541)
Q Consensus 287 ~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~-a~~~~~~~~~~gaDivv~S~sK~-----lg 360 (541)
++. .+ ++..+++..| |.+|.+.|+++|+++||++|+++++|... +......|.++|+||++.+.+|| +|
T Consensus 201 d~~---~~-~~~~vlvq~p-~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~G 275 (954)
T PRK05367 201 ALD---HD-DVFGVLLQYP-GTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFG 275 (954)
T ss_pred CCC---cc-cEEEEEEecC-CCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCC
Confidence 111 22 4777777666 57999999999999999999999999865 33445678889999999999999 66
Q ss_pred CCCCceEEEEEeChHHHHHH
Q 009167 361 GHNDVLAGSISGSGKLVTQI 380 (541)
Q Consensus 361 g~gd~~gG~lv~~~~li~~l 380 (541)
|++ +|+++.++++.+.+
T Consensus 276 GP~---aGflavr~~~~r~l 292 (954)
T PRK05367 276 GPH---AAYFAVRDAYKRSM 292 (954)
T ss_pred CCC---EEEEEECHHHHhhC
Confidence 665 89999988776655
No 300
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.54 E-value=5.3e-12 Score=138.30 Aligned_cols=203 Identities=17% Similarity=0.145 Sum_probs=131.9
Q ss_pred EEEeCCHHHHHHHHHHHh----cc----------------------CCCEEEEcCCCCcchHHHHHhhcccCCe---EEE
Q 009167 228 TVIMASGMSASTVMLLAL----VP----------------------AGGHIVTTTDCYRKTRIFIETVLPKMGI---TAT 278 (541)
Q Consensus 228 ~i~~sSGs~Ai~~al~al----l~----------------------pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi---~v~ 278 (541)
.+++++|++|+..++.+- ++ ++.+|++++.+|.+..... ...|+ +++
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa----~~lglg~~~v~ 237 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAA----DVLGIGRDNLI 237 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHH----HHcCCCcccEE
Confidence 678888999888877532 11 2357999999998866443 22333 444
Q ss_pred EeCC-----CCHHHHHHhccC---CCceEEEEe--CCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccc-----
Q 009167 279 VIDP-----ADMEGLEAALNN---NNVSLFFTE--SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----- 343 (541)
Q Consensus 279 ~vd~-----~d~e~Le~al~~---~~tklV~le--sP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~----- 343 (541)
.++. .|+++|+++|++ .+++.+++. ..++.||.+.|+++|+++|+++|++++||.+|+......+
T Consensus 238 ~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~ 317 (522)
T TIGR03799 238 AIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHL 317 (522)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHH
Confidence 4442 389999988852 135555444 4567899999999999999999999999999886433222
Q ss_pred -cc-cCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHH---Hhh-----------hcCCCc-hHHHHHHHHHhH--
Q 009167 344 -LS-LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRN---LHH-----------VLGGAL-NPNAAYLIIRGM-- 403 (541)
Q Consensus 344 -~~-~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~---~~~-----------~~G~~~-s~~~a~l~l~~l-- 403 (541)
.. .++|.++.|.||+++++-+ .|+++.+ +++.+.+.. +.. .-|+.. .....|.+++.+
T Consensus 318 l~gle~aDSit~d~HK~l~~P~g--~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~ 395 (522)
T TIGR03799 318 LKGIERADSVTIDAHKQLYVPMG--AGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGR 395 (522)
T ss_pred hcCchhCCEEEEChhhcCCcCcc--cEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhH
Confidence 12 2689999999997765542 5766654 455444432 110 001111 122345555443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCC
Q 009167 404 KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (541)
Q Consensus 404 ~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P 436 (541)
+.+...+++..+.++++.+.|++.|.++-+.-|
T Consensus 396 ~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p 428 (522)
T TIGR03799 396 KGYELLIDQSIEKAKYFADLIQQQPDFELVTEP 428 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC
Confidence 345566677778899999999998887655444
No 301
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.54 E-value=3.1e-13 Score=142.15 Aligned_cols=239 Identities=21% Similarity=0.250 Sum_probs=143.4
Q ss_pred HHHHHHHhCCC----cE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhh-ccc-----CCeEEEE--eCC
Q 009167 216 EEKMSALEGAE----ST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV-LPK-----MGITATV--IDP 282 (541)
Q Consensus 216 e~~LA~l~g~e----~~-i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~-l~~-----~Gi~v~~--vd~ 282 (541)
++++.+++|++ .+ +=.-||+.|+..++.+|++|||+|+..+..+++....-... .++ ...++.. +|.
T Consensus 72 ~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~ 151 (399)
T PF00464_consen 72 IERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDP 151 (399)
T ss_dssp HHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-T
T ss_pred HHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeec
Confidence 56677788987 44 44579999999999999999999999998887632110000 000 1122222 332
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCC-----CCCcccccccCCcEEEE
Q 009167 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA-----TPLNQKALSLGADLVLH 353 (541)
Q Consensus 283 ----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a-----~~~~~~~~~~gaDivv~ 353 (541)
.|.+++++.+++.++|+|++-.-+ ....+|++++.++|++.|++|++|.++. .+...+|+++ +|+++.
T Consensus 152 ~~~~ID~d~l~~~a~~~kPklIi~G~S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-ADvvt~ 228 (399)
T PF00464_consen 152 DTGLIDYDELEKLAKEHKPKLIICGASS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-ADVVTG 228 (399)
T ss_dssp TTSSB-HHHHHHHHHHH--SEEEEE-SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SSEEEE
T ss_pred CCCeECHHHHHHHHhhcCCCEEEECchh--ccCccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-ceEEEe
Confidence 288999988876678999984443 4566899999999999999999999954 3566789987 999999
Q ss_pred CCccccCCCCCceEEEEEeC--------------hHHHHHHHHHhh--hcCCC-chHHHHH-HHH-HhH-HHHHHHHHHH
Q 009167 354 SATKFIGGHNDVLAGSISGS--------------GKLVTQIRNLHH--VLGGA-LNPNAAY-LII-RGM-KTLHLRVQQQ 413 (541)
Q Consensus 354 S~sK~lgg~gd~~gG~lv~~--------------~~li~~l~~~~~--~~G~~-~s~~~a~-l~l-~~l-~tl~~r~~~~ 413 (541)
|+||.|.|+- +|+++.+ +++.+++..... ..|+. ++..++. .++ ..+ .......++.
T Consensus 229 sThKtl~GPr---ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qV 305 (399)
T PF00464_consen 229 STHKTLRGPR---GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQV 305 (399)
T ss_dssp ESSGGG-SSS----EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred eccccccccC---ceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHH
Confidence 9999999985 8999988 678888876432 22222 2222221 111 111 1345677888
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC---CHHHHHHHHHHcc
Q 009167 414 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLTATIKFIDALK 477 (541)
Q Consensus 414 ~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~---~~~~~~~~l~~L~ 477 (541)
.+|++.|++.|.+... ++..-+-. ..++++++.. +...+.+++++..
T Consensus 306 v~NAk~La~~L~~~G~--~v~~ggTd---------------~H~vlvd~~~~~~~g~~a~~~Le~~g 355 (399)
T PF00464_consen 306 VKNAKALAEALQERGF--KVVTGGTD---------------NHQVLVDLRSFGIDGKEAEKALEEAG 355 (399)
T ss_dssp HHHHHHHHHHHHHTT---EEGGGS-S---------------SSEEEEEGGGGTS-HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhCCc--EEEECCCC---------------CCeEEEEecccccchHHHHHHHHhcC
Confidence 8999999999998642 23222211 3478888753 2244555555543
No 302
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.53 E-value=1e-12 Score=139.75 Aligned_cols=214 Identities=19% Similarity=0.236 Sum_probs=146.3
Q ss_pred ccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe--
Q 009167 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI-- 280 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v-- 280 (541)
.|+ ++|+..+||+.+++++|.+.++.++||+.|+++++...+++||.| +...|..+...- ....|....-+
T Consensus 73 ~Ya--gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ah---I~~~Ga~fvDi~~ 145 (460)
T PRK13237 73 AYA--GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYH---QELNGGIFVDIII 145 (460)
T ss_pred hhc--CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHH---HHhCCcEEEeeec
Confidence 355 688999999999999999999999999999998766678999965 556565544321 12223322111
Q ss_pred ------------C-CCCHHHHHHhccCC---CceEEEEeCCCCCC-Cccc---cHHHHHHHHHhCCCEEEEeCCCCCC--
Q 009167 281 ------------D-PADMEGLEAALNNN---NVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCIDGTFATP-- 338 (541)
Q Consensus 281 ------------d-~~d~e~Le~al~~~---~tklV~lesP~NPt-G~i~---dl~~Ia~la~~~gi~lIvDea~a~~-- 338 (541)
+ ..|+++|+++|++. ++++|.++.++|.. |..+ ++++|.++|++||+.||.|.+....
T Consensus 146 d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna 225 (460)
T PRK13237 146 DEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENA 225 (460)
T ss_pred ccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcCh
Confidence 1 13899999999753 35678888889988 5666 5789999999999999999995432
Q ss_pred ---------Cccccc-------ccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhc-C----CCchH-HH
Q 009167 339 ---------LNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVL-G----GALNP-NA 395 (541)
Q Consensus 339 ---------~~~~~~-------~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~-G----~~~s~-~~ 395 (541)
+..++. ...+|.+++|++|.++.. .||+++. ++++.++++.....+ | +.++. ..
T Consensus 226 ~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~---~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~ 302 (460)
T PRK13237 226 YFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVN---IGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDM 302 (460)
T ss_pred hhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCC---CceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHH
Confidence 212221 124799999999998865 3787776 567888888764333 2 12222 21
Q ss_pred HHHHHHhHH-HHH-HHHHHHHHHHHHHHHHHHhC
Q 009167 396 AYLIIRGMK-TLH-LRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 396 a~l~l~~l~-tl~-~r~~~~~~~a~~la~~L~~~ 427 (541)
..++ .+++ ... ..+++..++.++|++.|.+.
T Consensus 303 ~alA-vgl~E~~~~~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 303 EAMA-IGIEESVQYEYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred HHHH-hHHHhhchHHHHHHHHHHHHHHHHHHHHC
Confidence 2222 2332 221 45556667889999999875
No 303
>PLN02880 tyrosine decarboxylase
Probab=99.53 E-value=3.6e-12 Score=139.07 Aligned_cols=230 Identities=14% Similarity=0.122 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHhc----c-------CCCEEEEcCCCCcchHHHHHhhcc
Q 009167 212 TVVVEEKMSALEGAES---------TVIMASGMSASTVMLLALV----P-------AGGHIVTTTDCYRKTRIFIETVLP 271 (541)
Q Consensus 212 ~~~Le~~LA~l~g~e~---------~i~~sSGs~Ai~~al~all----~-------pGd~Vlv~~~~y~~~~~~~~~~l~ 271 (541)
-.++-+.+++++|.++ .+++++|++|+..++.+.- + +.-.|++++..|.+..... .
T Consensus 124 E~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa----~ 199 (490)
T PLN02880 124 EMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKAC----Q 199 (490)
T ss_pred HHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHH----H
Confidence 3445566777777642 6788888998877775421 1 1124667888888765443 3
Q ss_pred cCCe-----EEEEeCC-----CCHHHHHHhccCC-----CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCC
Q 009167 272 KMGI-----TATVIDP-----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 272 ~~Gi-----~v~~vd~-----~d~e~Le~al~~~-----~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a 336 (541)
.+|+ ..+.+|. .|+++|+++|++. .+-+|+.+..+-.+|.+-|+++|+++|+++|++++||.+|+
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~g 279 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYA 279 (490)
T ss_pred HcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhH
Confidence 3343 3333432 3899999888532 24566666777889999999999999999999999999988
Q ss_pred CCCcccc-----cc--cCCcEEEECCccccCCCCCceEEEEEeCh-H-HHHHHHH---Hhhh-----------------c
Q 009167 337 TPLNQKA-----LS--LGADLVLHSATKFIGGHNDVLAGSISGSG-K-LVTQIRN---LHHV-----------------L 387 (541)
Q Consensus 337 ~~~~~~~-----~~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~-li~~l~~---~~~~-----------------~ 387 (541)
......+ +. .++|.++.++||+++.+- .+|+++.++ . +...+.. +... .
T Consensus 280 g~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~--~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~ 357 (490)
T PLN02880 280 GSACICPEYRHYIDGVEEADSFNMNAHKWFLTNF--DCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPL 357 (490)
T ss_pred HHHHhCHHHHHHhcCchhcCEEEECchhhcCCCc--cEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCC
Confidence 7533221 11 368999999999998765 357776653 2 2222211 1000 1
Q ss_pred CCCchHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC
Q 009167 388 GGALNPNAAYLII--RGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 388 G~~~s~~~a~l~l--~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~ 464 (541)
|.....+..|+.+ .|.+.+..++++..+.++++++.|++.|..+-+.-|. .+++.|.+++
T Consensus 358 ~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~-----------------~~iv~Fr~~~ 419 (490)
T PLN02880 358 GRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRI-----------------FSLVCFRLVP 419 (490)
T ss_pred CCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCc-----------------eEEEEEEEeC
Confidence 1111234445443 3567778888888899999999999888765443332 3588898864
No 304
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.53 E-value=3.3e-12 Score=137.36 Aligned_cols=288 Identities=15% Similarity=0.117 Sum_probs=166.2
Q ss_pred CCchhHHHHHHHHHHHhC----CC-cEEEe-CCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHH-HHHh-----hccc
Q 009167 207 YGNPTTVVVEEKMSALEG----AE-STVIM-ASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRI-FIET-----VLPK 272 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g----~e-~~i~~-sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~-~~~~-----~l~~ 272 (541)
+.++...+|.++|+++.. .+ ...++ +||++|+..+++.. .....+||.....|++... .+.. .-..
T Consensus 79 ~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~ 158 (425)
T PRK09264 79 MHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQG 158 (425)
T ss_pred cCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccC
Confidence 456777888899988742 23 34454 69999999998743 2234678888888888432 1110 0011
Q ss_pred CCe---EEEEeCC--------CCHHHHHHhccC-----CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEe
Q 009167 273 MGI---TATVIDP--------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 273 ~Gi---~v~~vd~--------~d~e~Le~al~~-----~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvD 332 (541)
++. .+..++. .|++++++.+++ +++.+|++|...+..|.+.+ +++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (425)
T PRK09264 159 AGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVD 238 (425)
T ss_pred CCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEe
Confidence 111 2333443 367788888752 24789999999887787553 889999999999999999
Q ss_pred CCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCCchHHHHHHHHHhHH
Q 009167 333 GTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMK 404 (541)
Q Consensus 333 ea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~s~~~a~l~l~~l~ 404 (541)
|++... +.........|+++ ++|.+++.| ...|++++++++ ..+.... ..++ .+|..+..++..++
T Consensus 239 EV~tG~GrtG~~~~~~~~~v~PDi~t--~~K~l~~~G-~pigav~~~~~i-~~~~~~~~~~T~~--gnp~~~aaa~a~l~ 312 (425)
T PRK09264 239 DIQAGCGRTGTFFSFERAGITPDIVT--LSKSISGYG-LPMALVLIKPEL-DVWKPGEHNGTFR--GNNLAFVTATAALE 312 (425)
T ss_pred chhhCCccccHHHHHhhcCCCCCEEE--eccccCCCc-cceEEEEEchhh-hccCCCccCCCCC--CCHHHHHHHHHHHH
Confidence 997531 11222334568765 679998755 456788887775 3332111 1122 23444444434442
Q ss_pred HH-H--HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCe
Q 009167 405 TL-H--LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI 481 (541)
Q Consensus 405 tl-~--~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~i 481 (541)
.+ . ...++..++.+++.+.|++... .+|.+ ....+|.|.+++++++. .+....+...+...|+
T Consensus 313 ~~~~~~~l~~~~~~~g~~l~~~l~~l~~----~~~~~---------~~~vrg~Gl~~~i~l~~-~~~~~~l~~~~~~~Gv 378 (425)
T PRK09264 313 EYWSDDAFEKEVKAKGELVRERLEEIAA----KYPGL---------GAEVRGRGMMQGIDFGD-GELAGKIAAEAFENGL 378 (425)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHH----hCCCc---------eecceecccEEEEEecC-hHHHHHHHHHHHHCCC
Confidence 21 1 1223333444555554443210 11211 01124578899999964 3455667766655554
Q ss_pred ecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009167 482 APSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 482 avS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~ 539 (541)
-+...+ .....||++..+ ++.+..++.|.++|+
T Consensus 379 ~~~~~~-------------------------~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~ 415 (425)
T PRK09264 379 IIETSG-------------------------PEDEVVKLLPPLTIDEEELEEGLDILEEAVA 415 (425)
T ss_pred EEeccC-------------------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 332211 123578888664 455556666666654
No 305
>PRK07046 aminotransferase; Validated
Probab=99.53 E-value=6.3e-12 Score=135.99 Aligned_cols=215 Identities=20% Similarity=0.222 Sum_probs=144.1
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHH-HHhhc-------c-cCCe
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIF-IETVL-------P-KMGI 275 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~-~~~~l-------~-~~Gi 275 (541)
+.++...+|.++|.++.+.+.+.+++||++|+..+++.. ....++|+.....|++.... +.... . ..|+
T Consensus 112 ~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~ 191 (453)
T PRK07046 112 LPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQ 191 (453)
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCC
Confidence 457778889999999988788999999999999998743 23346888888889885311 11100 0 0111
Q ss_pred ------EEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCC----CCCcc
Q 009167 276 ------TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA----TPLNQ 341 (541)
Q Consensus 276 ------~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a----~~~~~ 341 (541)
.+..++.+|++++++.+..+++.+|++|......|.+.| +++|.++|+++|+++|+||++. .+-..
T Consensus 192 ~~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~ 271 (453)
T PRK07046 192 VHDLTATTRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT 271 (453)
T ss_pred CccccCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh
Confidence 234456679999999986446999999998877787766 7899999999999999999974 22122
Q ss_pred cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-----h--hcCCC--chHHHHHHHHHhHHHHHH--HH
Q 009167 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----H--VLGGA--LNPNAAYLIIRGMKTLHL--RV 410 (541)
Q Consensus 342 ~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-----~--~~G~~--~s~~~a~l~l~~l~tl~~--r~ 410 (541)
.......|+++ +.|.++|+ ...|++++++++++.+.... . .++++ .+|..+.+++..|+.+.. ..
T Consensus 272 ~~~gv~PDi~t--~gK~lggG--~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~ 347 (453)
T PRK07046 272 RAHGLEPDFLV--VGKPIAGG--VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAY 347 (453)
T ss_pred HHhCCCcccee--ehhhhcCC--CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHH
Confidence 22344578887 79999964 45788889999888775311 0 12222 356666666666655422 12
Q ss_pred HHHHHHHHHHHHHHH
Q 009167 411 QQQNSTALRMAKILE 425 (541)
Q Consensus 411 ~~~~~~a~~la~~L~ 425 (541)
++..+..+++.+.|+
T Consensus 348 ~~~~~~g~~l~~~L~ 362 (453)
T PRK07046 348 AHMLALAARLAAGLR 362 (453)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333334444444444
No 306
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.53 E-value=7.9e-12 Score=134.96 Aligned_cols=288 Identities=11% Similarity=0.132 Sum_probs=169.4
Q ss_pred CCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHH-HH--------H
Q 009167 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRI-FI--------E 267 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g--~e~~i~~sSGs~Ai~~al~all~-------p-Gd~Vlv~~~~y~~~~~-~~--------~ 267 (541)
+.++...+|.++|+++.. .+.+.+++||++|+..+++.... + ..+||.....|++... .+ +
T Consensus 86 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~ 165 (442)
T PRK13360 86 MGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNR 165 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhh
Confidence 457888899999999874 36788899999999999874321 2 3579999999988321 11 0
Q ss_pred hhcccCCeEEEEeCCC------------------CHHHHHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHHHHH
Q 009167 268 TVLPKMGITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 268 ~~l~~~Gi~v~~vd~~------------------d~e~Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia~la 322 (541)
.........+.+++.. .+++|++.+. .+++.+|++|......|.+.| +++|.++|
T Consensus 166 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc 245 (442)
T PRK13360 166 KAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREIC 245 (442)
T ss_pred hccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 0001001112222211 1456777774 235889999999988899988 99999999
Q ss_pred HhCCCEEEEeCCCC-CCC-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-------hhhcCC
Q 009167 323 HKKGAIVCIDGTFA-TPL-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGG 389 (541)
Q Consensus 323 ~~~gi~lIvDea~a-~~~-----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-------~~~~G~ 389 (541)
++||+++|+||++. .+. .........|+++ ++|.++++. ...|.+++++++.+.+... ......
T Consensus 246 ~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt--~gK~l~gG~-~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~ 322 (442)
T PRK13360 246 DKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLT--CAKGLTNGA-IPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTY 322 (442)
T ss_pred HHcCCEEEEechhhCCCCCccchhhhhcCCCCceee--eeeccccCc-cceEEEEEcHHHHHHhhcCCccccccccCCCC
Confidence 99999999999963 211 1222233468775 899998642 2356677788887766421 111111
Q ss_pred CchHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC--
Q 009167 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-- 465 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-- 465 (541)
..+|..+..++..++.+.. ..++..+..+++.+.|++.. .+|.+ ...+|.|.++.+++...
T Consensus 323 ~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-----~~~~v----------~~vrG~Gl~~~~~l~~~~~ 387 (442)
T PRK13360 323 SGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLR-----DAPHV----------IDIRNLGLVGAVELAPRDG 387 (442)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-----cCCCe----------eeeeccceEEEEEEecCCC
Confidence 2356666666666665532 22333344444555554321 01211 12256677877877421
Q ss_pred --HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009167 466 --LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 466 --~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~ 539 (541)
...+.++.+.+...|+-+.. ..+.|||+..+ ++.+.+++.|+++|+
T Consensus 388 ~~~~~~~~~~~~l~~~Gvl~~~----------------------------~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~ 439 (442)
T PRK13360 388 KPGKRAYEVFLKCFEKGLMIRY----------------------------TGDILALSPPLIIEEAQIDELFDILAQALK 439 (442)
T ss_pred CcchhHHHHHHHHHHCCcEEEe----------------------------cCCEEEEeCCCccCHHHHHHHHHHHHHHHH
Confidence 12344555555444443221 12468888554 455566666666665
Q ss_pred h
Q 009167 540 A 540 (541)
Q Consensus 540 ~ 540 (541)
+
T Consensus 440 ~ 440 (442)
T PRK13360 440 E 440 (442)
T ss_pred H
Confidence 4
No 307
>PRK07678 aminotransferase; Validated
Probab=99.52 E-value=1.1e-11 Score=134.37 Aligned_cols=294 Identities=15% Similarity=0.180 Sum_probs=175.5
Q ss_pred CCCchhHHHHHHHHHHHhCCC-cEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHhh-------
Q 009167 206 RYGNPTTVVVEEKMSALEGAE-STVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV------- 269 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs~Ai~~al~all~-------pG-d~Vlv~~~~y~~~~~~~~~~------- 269 (541)
.+.++...+|.++|+++.+.. .+++++||++|+..+++.... +| .+||.....|++.....-..
T Consensus 85 ~~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~ 164 (451)
T PRK07678 85 TQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRK 164 (451)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccc
Confidence 356778889999999998654 567778999999999874321 23 57888888888843211110
Q ss_pred --cccCCeEEEEeCCC--------------C---HHHHHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHHHHHH
Q 009167 270 --LPKMGITATVIDPA--------------D---MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 270 --l~~~Gi~v~~vd~~--------------d---~e~Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia~la~ 323 (541)
.....-.+..++.. + ++.+++.++ .+++.+|++|......|.+.+ +++|.++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~ 244 (451)
T PRK07678 165 YKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQ 244 (451)
T ss_pred cccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHH
Confidence 00000111222211 1 233555563 235899999998877787776 889999999
Q ss_pred hCCCEEEEeCCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh----hhcCC--Cc
Q 009167 324 KKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLGG--AL 391 (541)
Q Consensus 324 ~~gi~lIvDea~a~~-~-----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~----~~~G~--~~ 391 (541)
+||+++|+||++... - .........|+++ ++|.++++. ...|.+++++++++.+.... ..++. ..
T Consensus 245 ~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt--~gK~lggG~-~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~g 321 (451)
T PRK07678 245 KHGALLISDEVICGFGRTGKAFGFMNYGVKPDIIT--MAKGITSAY-LPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGG 321 (451)
T ss_pred HcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEE--eecccccCC-cceeEEEEcHHHHHHHhccCcccccccCCCCCc
Confidence 999999999996321 1 1222344578887 789998753 34678888888887775311 01222 23
Q ss_pred hHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-
Q 009167 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG- 464 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~- 464 (541)
+|..+..++..|+.+.. ..++..+..+++.+.|++ ++.+.. .+|.|.|+.+++..
T Consensus 322 np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~------------------vrg~Gl~~~i~~~~~ 383 (451)
T PRK07678 322 NPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGD------------------IRGKGLLVGIELVND 383 (451)
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEE------------------EEeeceEEEEEEecC
Confidence 56777666666666542 223333344444444432 333222 35678899999842
Q ss_pred -------CHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHH
Q 009167 465 -------DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKAD 533 (541)
Q Consensus 465 -------~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~d 533 (541)
+...+.++...+...|+-+...+ |.. + ...+.|||+..+ ++.+.+++.
T Consensus 384 ~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g-------~~v------~--------~~~~~lrl~Ppl~it~~eid~~~~~ 442 (451)
T PRK07678 384 KETKEPADNDKVASVVAACKEKGLIIGKNG-------DTV------A--------GYNNVLTLSPPLVISSEEIAFIVGT 442 (451)
T ss_pred CcccCcCchHHHHHHHHHHHHCCcEEeecC-------ccc------c--------CCCCEEEEECCCcCCHHHHHHHHHH
Confidence 12335566666665554432211 000 0 013678997655 455666666
Q ss_pred HHHHHhhC
Q 009167 534 VLQALHAI 541 (541)
Q Consensus 534 L~~AL~~i 541 (541)
|+++|++|
T Consensus 443 l~~~l~~~ 450 (451)
T PRK07678 443 LKTALERI 450 (451)
T ss_pred HHHHHHhc
Confidence 66766653
No 308
>PRK06541 hypothetical protein; Provisional
Probab=99.52 E-value=7.8e-12 Score=135.61 Aligned_cols=240 Identities=14% Similarity=0.162 Sum_probs=150.2
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHhh------
Q 009167 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV------ 269 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~--------pGd~Vlv~~~~y~~~~~~~~~~------ 269 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++.... ...+||.....|++........
T Consensus 91 ~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 170 (460)
T PRK06541 91 SYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAF 170 (460)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhh
Confidence 45678888999999998753 5788889999999999874321 1367888888888843211111
Q ss_pred ---cccCCeEEEEeCC----------CC--------HHHHHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHHHH
Q 009167 270 ---LPKMGITATVIDP----------AD--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (541)
Q Consensus 270 ---l~~~Gi~v~~vd~----------~d--------~e~Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia~l 321 (541)
....-..+..++. ++ ++.+++.++ ++++.+|++|...++.|.+.+ +++|.++
T Consensus 171 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~l 250 (460)
T PRK06541 171 KAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREI 250 (460)
T ss_pred ccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHH
Confidence 0000011122211 12 356777774 235788999888999999988 9999999
Q ss_pred HHhCCCEEEEeCCCC-CCCc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcC--CCc
Q 009167 322 CHKKGAIVCIDGTFA-TPLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLG--GAL 391 (541)
Q Consensus 322 a~~~gi~lIvDea~a-~~~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G--~~~ 391 (541)
|++||+++|+||++. .+.. ........|+++ ++|.++++ -...|++++++++++.+..... ..+ ...
T Consensus 251 c~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~~G-~~pigav~~~~~i~~~~~~~~~~~~~~~T~~g 327 (460)
T PRK06541 251 CDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGITSG-YSPLGAMIASDRLFEPFLDGPTMFLHGYTFGG 327 (460)
T ss_pred HHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--ecccccCC-ccceeEEEEcHHHHHHhhcCCCccccCCCCCC
Confidence 999999999999973 2211 112233468876 89999853 1236777888888877653211 112 223
Q ss_pred hHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
+|..+..++..++.+.. ..++..+..+++.+.|++.. . +|. ..+++|.|.|+.+++.
T Consensus 328 np~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~---~--~~~----------v~~vrg~Gl~~~ie~~ 386 (460)
T PRK06541 328 HPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLL---D--LPI----------VGDVRGDGYFYGIELV 386 (460)
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhh---c--CCC----------eEEEEecceEEEEEEe
Confidence 56666666666665432 23444455566666665431 0 221 1123567889999984
No 309
>PRK07482 hypothetical protein; Provisional
Probab=99.52 E-value=1.5e-11 Score=133.55 Aligned_cols=238 Identities=12% Similarity=0.077 Sum_probs=146.9
Q ss_pred CCCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhc-------cC-CCEEEEcCCCCcchHHH-H-------
Q 009167 205 GRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV-------PA-GGHIVTTTDCYRKTRIF-I------- 266 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g--~e~~i~~sSGs~Ai~~al~all-------~p-Gd~Vlv~~~~y~~~~~~-~------- 266 (541)
..+.++...+|.++|+++.+ .+.+++++||++|+..+++... .+ ..+||.....|++.... +
T Consensus 89 ~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~ 168 (461)
T PRK07482 89 VGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSL 168 (461)
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCch
Confidence 34667888899999999885 3578888999999999997542 12 35788888889883211 1
Q ss_pred -HhhcccCCeEEEEeCCC------------------CHHHHHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHHH
Q 009167 267 -ETVLPKMGITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSD 320 (541)
Q Consensus 267 -~~~l~~~Gi~v~~vd~~------------------d~e~Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia~ 320 (541)
...+...--.+..++.. +++++++.+. .+++.+|++|......|.+.+ +++|.+
T Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~ 248 (461)
T PRK07482 169 FHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQA 248 (461)
T ss_pred hhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHH
Confidence 00011000111111100 3567777773 235899999998877787765 779999
Q ss_pred HHHhCCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-----hhhcCC
Q 009167 321 LCHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGG 389 (541)
Q Consensus 321 la~~~gi~lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-----~~~~G~ 389 (541)
+|++||+++|+||++... +........+|+++ +.|.++|+- ...|.+++++++.+.+... ...++.
T Consensus 249 lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~ 325 (461)
T PRK07482 249 VLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLIT--VAKGLTSAY-APLSGSIVGEKVWDVLEQGSDEHGAIGHGW 325 (461)
T ss_pred HHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEE--EccccccCc-cccceeeecHHHHHHHhcccccCCccccCC
Confidence 999999999999995421 12233344579998 789998642 2356677778887766421 001222
Q ss_pred C--chHHHHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEE
Q 009167 390 A--LNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE 461 (541)
Q Consensus 390 ~--~s~~~a~l~l~~l~tl~~r--~~~~~~~a~~la~~L~----~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~ 461 (541)
+ -+|..+..++..++.+... .++..+..+++.+.|+ ++|.+. ..+|.|.|+.++
T Consensus 326 T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~------------------~vrG~Glm~gie 387 (461)
T PRK07482 326 TYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVG------------------EVRGVGMLAAVE 387 (461)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEE------------------EEeeceeEEEEE
Confidence 2 3566676666666654321 2222333334444443 233332 235688899999
Q ss_pred Ec
Q 009167 462 VD 463 (541)
Q Consensus 462 l~ 463 (541)
+.
T Consensus 388 l~ 389 (461)
T PRK07482 388 FV 389 (461)
T ss_pred ec
Confidence 95
No 310
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.52 E-value=5.7e-12 Score=136.39 Aligned_cols=289 Identities=14% Similarity=0.149 Sum_probs=172.9
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc-------cC-CCEEEEcCCCCcchHHHHHhh------
Q 009167 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PA-GGHIVTTTDCYRKTRIFIETV------ 269 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all-------~p-Gd~Vlv~~~~y~~~~~~~~~~------ 269 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++... .+ ..+||.....|++........
T Consensus 93 ~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~ 172 (453)
T PRK06943 93 GCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALF 172 (453)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhh
Confidence 45677888999999998864 468888899999999988541 12 367999999998843111000
Q ss_pred ---cccCCeEEEEeCC-----------------CCHHHHHHhcc--CCCceEEEEeC-CCCCCCcccc----HHHHHHHH
Q 009167 270 ---LPKMGITATVIDP-----------------ADMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 270 ---l~~~Gi~v~~vd~-----------------~d~e~Le~al~--~~~tklV~les-P~NPtG~i~d----l~~Ia~la 322 (541)
....-..+..++. .+++++++.+. .+++.+|++|. +....|.+.+ +++|.++|
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc 252 (453)
T PRK06943 173 KDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALC 252 (453)
T ss_pred hcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHH
Confidence 0000001112211 12467777774 23589999998 4777777665 78999999
Q ss_pred HhCCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh----hhcCCC--
Q 009167 323 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLGGA-- 390 (541)
Q Consensus 323 ~~~gi~lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~----~~~G~~-- 390 (541)
++||+++|.||++... +.........|+++ +.|.++|+ -...|.+++++++.+.+.... ...+.+
T Consensus 253 ~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt--~gKgl~gG-~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~ 329 (453)
T PRK06943 253 DRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLC--LSKGISGG-YLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYT 329 (453)
T ss_pred HHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEe--eehhhccC-cccceEEEEcHHHHHhhcccCccCCccCCCCCC
Confidence 9999999999995421 11223344578988 68999864 124677788888887764210 012222
Q ss_pred chHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC---
Q 009167 391 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD--- 465 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~--- 465 (541)
-+|..+..++..|+.+.. .+++..+.-+++.+.|++. . .+|.+ .+.+|.|.|+.+++..+
T Consensus 330 gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l---~--~~~~v----------~~vrG~Gl~~gvel~~~~~~ 394 (453)
T PRK06943 330 GNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPL---A--AHPQV----------RHLRQRGTIFAFDVALDGDA 394 (453)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH---h--cCCCE----------EeEeccccEEEEEEccCCCc
Confidence 256666666666666542 1233333344444444432 0 12221 13467899999999622
Q ss_pred -HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHhh
Q 009167 466 -LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 466 -~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlS----vG~e~~edli~dL~~AL~~ 540 (541)
.....++...+...|+-+... .+.+||+ +..++.+..++.|+++|++
T Consensus 395 ~~~~~~~i~~~~~~~Gll~~~~----------------------------g~~l~~~Ppl~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 395 ARTFSRRFFEAALERELLLRPI----------------------------GTTVYLMPPYVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred chHHHHHHHHHHHHCCcEEEec----------------------------CCEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 122445555554444322111 1346666 3446667777777777764
No 311
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.52 E-value=1.2e-11 Score=133.05 Aligned_cols=215 Identities=19% Similarity=0.249 Sum_probs=142.6
Q ss_pred CCchhHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhc--c--------cC
Q 009167 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL--P--------KM 273 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g-~e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l--~--------~~ 273 (541)
+.++...+|.++|.++.+ .+.+.+++||++|+..+++.. .....+||.....|++........- . ..
T Consensus 90 ~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 169 (428)
T PRK12389 90 TPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSA 169 (428)
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCC
Confidence 567778889999988775 367888899999999998743 2234678888888888432211110 0 01
Q ss_pred C------eEEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC---
Q 009167 274 G------ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (541)
Q Consensus 274 G------i~v~~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~--- 338 (541)
+ -.+..++..|++.+++.+++ +++.+|++|...+..|.+.| +++|.++|++||+++|+||++...
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~ 249 (428)
T PRK12389 170 GVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFM 249 (428)
T ss_pred CCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccC
Confidence 1 13444566789999888852 24889999999988898888 999999999999999999996532
Q ss_pred Cc--ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-hhcCC--CchHHHHHHHHHhHHHHHH--HHH
Q 009167 339 LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGG--ALNPNAAYLIIRGMKTLHL--RVQ 411 (541)
Q Consensus 339 ~~--~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-~~~G~--~~s~~~a~l~l~~l~tl~~--r~~ 411 (541)
.. .......+|+++ ++|.++++ ...|.+++++++++.+.... ...+. ..+|..+..++..|+.+.. ..+
T Consensus 250 ~~~a~~~~gv~PDivt--~gK~lggG--~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~ 325 (428)
T PRK12389 250 YGGAQDLLGVEPDLTA--LGKIIGGG--LPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYE 325 (428)
T ss_pred cchhhHHhCCCCCeee--echhhcCC--CceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHH
Confidence 11 122234568875 89999864 34666788888888774211 11222 3456777666666666532 233
Q ss_pred HHHHHHHHHHHHHH
Q 009167 412 QQNSTALRMAKILE 425 (541)
Q Consensus 412 ~~~~~a~~la~~L~ 425 (541)
+..+..+++.+.|+
T Consensus 326 ~~~~~g~~l~~~L~ 339 (428)
T PRK12389 326 KLDRLGAMLEEGIL 339 (428)
T ss_pred HHHHHHHHHHHHHH
Confidence 34444455555554
No 312
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=5.1e-12 Score=136.99 Aligned_cols=291 Identities=16% Similarity=0.179 Sum_probs=171.2
Q ss_pred CccCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchH-HHHHhh-------
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTR-IFIETV------- 269 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~-~~~~~~------- 269 (541)
|...++.++...+|.++|+++.+. +.+++++||++|+..+++... ....+|+.....|++.. ..+...
T Consensus 105 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 184 (459)
T PRK06082 105 FSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQ 184 (459)
T ss_pred CccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCccccc
Confidence 334567889999999999999864 467888899999999987432 23467888888888743 111100
Q ss_pred -cccCCeEEEEeC--------CCC--------HHHHHHhccC-CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCE
Q 009167 270 -LPKMGITATVID--------PAD--------MEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAI 328 (541)
Q Consensus 270 -l~~~Gi~v~~vd--------~~d--------~e~Le~al~~-~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~ 328 (541)
.....-.+..++ ..+ ++.+++.++. +++.+|++|...+..+.+.| +++|.++|++||++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~l 264 (459)
T PRK06082 185 GMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVL 264 (459)
T ss_pred CCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 000000112222 111 3457777752 25889999998876444555 88999999999999
Q ss_pred EEEeCCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHh
Q 009167 329 VCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (541)
Q Consensus 329 lIvDea~a~~-~-----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~ 402 (541)
+|+||++... - .........|+++ ++|.++++. ...|.+++++++..........+....+|..+..++..
T Consensus 265 lI~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~-~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~ 341 (459)
T PRK06082 265 LIIDEIPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGGGL-VPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALAT 341 (459)
T ss_pred EEEechhhCCCccchhhHhHhhCCCCCEEE--ecccccCCC-CcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHH
Confidence 9999995431 1 1122334578887 899998643 23567777777654332111111222456666666666
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-------HHHH
Q 009167 403 MKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTAT 469 (541)
Q Consensus 403 l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-------~~~~ 469 (541)
++.+.. ..++..+..+++.+.|++ +|.+. +.+|.|.|+.+++..+ .+..
T Consensus 342 L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrG~Gl~~~ve~~~~~~~~~~~~~~~ 403 (459)
T PRK06082 342 IEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIG------------------DVRGIGLLWGVELVTDRHTKERAYDEA 403 (459)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCee------------------eeeeccceeEEEEccCccccCccHHHH
Confidence 665532 223333444445554443 22222 3367889999999532 1223
Q ss_pred HHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe----cCCCHHHHHHHHHHHHhh
Q 009167 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF----GVEDFEDLKADVLQALHA 540 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv----G~e~~edli~dL~~AL~~ 540 (541)
..++..+...|+-+... ..+.|||+. ..++.+..++.|+++|.+
T Consensus 404 ~~~~~~~~~~Gvl~~~~---------------------------~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 404 EAVLYRCLNNGLSFKVS---------------------------QGNVIQLSPPLIITREELTQALAILEEAIAK 451 (459)
T ss_pred HHHHHHHHhCCCEEEec---------------------------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 44554444334322110 135678774 445666677777777654
No 313
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.52 E-value=3e-12 Score=147.96 Aligned_cols=163 Identities=18% Similarity=0.226 Sum_probs=121.4
Q ss_pred hHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh-ccCC--CEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCH
Q 009167 211 TTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAG--GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~al-l~pG--d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~ 285 (541)
...++++.||++.|.+ ++-++.+++++.+++++++ +++| |+|++++.+|+.+...++..++..|++++.++..+.
T Consensus 149 al~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~ 228 (993)
T PLN02414 149 SLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF 228 (993)
T ss_pred HHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh
Confidence 3567799999999984 5777778888888777665 4544 789999999999988888888889999998876432
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCC--CCcccccccCCcEEEECCccccCCCC
Q 009167 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLVLHSATKFIGGHN 363 (541)
Q Consensus 286 e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~--~~~~~~~~~gaDivv~S~sK~lgg~g 363 (541)
+ ...+ .+..+++..|+ .+|.+.|+++|+++||++|+++++ .+... ....++.++|+||++.+.+||.++.|
T Consensus 229 ~----~~~~-~v~~vlvq~P~-~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G 301 (993)
T PLN02414 229 D----YSSG-DVCGVLVQYPA-TDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMG 301 (993)
T ss_pred c----cccC-ceEEEEEecCC-CCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCC
Confidence 2 1222 25566665554 599999999999999999999999 44322 22235778999999999999983222
Q ss_pred --CceEEEEEeChHHHHHH
Q 009167 364 --DVLAGSISGSGKLVTQI 380 (541)
Q Consensus 364 --d~~gG~lv~~~~li~~l 380 (541)
+.-.|+++.++++...+
T Consensus 302 ~GGP~aGflavr~~~~r~~ 320 (993)
T PLN02414 302 YGGPHAAFLATSQEYKRLM 320 (993)
T ss_pred CCCCCeeEEEECHHHHhhC
Confidence 11278999888765543
No 314
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.52 E-value=1e-11 Score=134.24 Aligned_cols=232 Identities=13% Similarity=0.089 Sum_probs=139.5
Q ss_pred CCchhHHHHHHHHHHHhCC----CcEEEe-CCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc------cC
Q 009167 207 YGNPTTVVVEEKMSALEGA----ESTVIM-ASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP------KM 273 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~----e~~i~~-sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l~------~~ 273 (541)
+.++...+|.++|+++.+. ...+++ +||++|+..+++.. .....+|+.....|++.......... .+
T Consensus 79 ~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~ 158 (442)
T TIGR00709 79 LTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAV 158 (442)
T ss_pred cCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccC
Confidence 5678888999999998753 244554 79999999998743 22346799888889885432211111 00
Q ss_pred C---eEEEEeCCCC-------------H----HHHHHhcc-----CCCceEEEEeCCCCCCCcccc----HHHHHHHHHh
Q 009167 274 G---ITATVIDPAD-------------M----EGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (541)
Q Consensus 274 G---i~v~~vd~~d-------------~----e~Le~al~-----~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~ 324 (541)
+ ..+.+++..+ . +.+++.+. .+++.+|++|.+.+..|.+.+ +++|.++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~ 238 (442)
T TIGR00709 159 GMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRK 238 (442)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 0 1122222111 1 12333332 124889999998877776654 7799999999
Q ss_pred CCCEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCC--CchHHHH
Q 009167 325 KGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNAA 396 (541)
Q Consensus 325 ~gi~lIvDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~--~~s~~~a 396 (541)
||+++|.||++... .. ........|+++ ++|.+++ | ...|+++++++ ++.+... .++. ..+|+.+
T Consensus 239 ~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~-G-~Pigav~~~~~-~~~~~~~--~~~~T~~gnpla~ 311 (442)
T TIGR00709 239 HDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVGG-G-LPLAVLLIAPE-FDAWQPA--GHTGTFRGNQLAM 311 (442)
T ss_pred cCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--EcccccC-C-cccEEEEEchH-HhccCCC--cCCCCCCcCHHHH
Confidence 99999999996532 11 112234568888 8999987 4 45677777776 3433211 1222 2356666
Q ss_pred HHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 397 YLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 397 ~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
..++..++.+.. ..++..+..+++.+.|++ +|.+. +.+|.|.|+.+++.
T Consensus 312 aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~------------------~vrG~Gl~~~ie~~ 366 (442)
T TIGR00709 312 VTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIG------------------NVRGRGLMQGIMIV 366 (442)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCee------------------eeeccceEEEEEEc
Confidence 666666665432 122333334444444443 23222 23678899999995
No 315
>PLN02590 probable tyrosine decarboxylase
Probab=99.52 E-value=1.3e-11 Score=135.36 Aligned_cols=243 Identities=15% Similarity=0.170 Sum_probs=155.6
Q ss_pred ccCCCCchhHHHHH----HHHHHHhCCCc---------EEEeCCHHHHHHHHHHHh----cc-------CCCEEEEcCCC
Q 009167 203 EYGRYGNPTTVVVE----EKMSALEGAES---------TVIMASGMSASTVMLLAL----VP-------AGGHIVTTTDC 258 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le----~~LA~l~g~e~---------~i~~sSGs~Ai~~al~al----l~-------pGd~Vlv~~~~ 258 (541)
.++....|...++| +.|++++|.++ .+++++|++|+..++.+. .+ +.-.|++++..
T Consensus 159 ~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~a 238 (539)
T PLN02590 159 GFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQT 238 (539)
T ss_pred cCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCc
Confidence 34444566555554 55666777532 688889999887776542 11 11245667778
Q ss_pred CcchHHHHHhh-cccCCeEEEEeC-----CCCHHHHHHhccCC-----CceEEEEeCCCCCCCccccHHHHHHHHHhCCC
Q 009167 259 YRKTRIFIETV-LPKMGITATVID-----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 327 (541)
Q Consensus 259 y~~~~~~~~~~-l~~~Gi~v~~vd-----~~d~e~Le~al~~~-----~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi 327 (541)
|.+.......+ +....+..+.+| ..|+++|+++|++. .+-+|+....+-.+|.+-|+++|+++|++||+
T Consensus 239 H~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~ 318 (539)
T PLN02590 239 HSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGI 318 (539)
T ss_pred hHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCC
Confidence 88765443211 111123333344 13899999998542 24566666777889999999999999999999
Q ss_pred EEEEeCCCCCCCcccc----cc---cCCcEEEECCccccCCCCCceEEEEEeChH--HHHHHHH---Hhh----------
Q 009167 328 IVCIDGTFATPLNQKA----LS---LGADLVLHSATKFIGGHNDVLAGSISGSGK--LVTQIRN---LHH---------- 385 (541)
Q Consensus 328 ~lIvDea~a~~~~~~~----~~---~gaDivv~S~sK~lgg~gd~~gG~lv~~~~--li~~l~~---~~~---------- 385 (541)
+++||.+|+......+ +. ..+|-++.++||++.-+-+ +|+++.++. +.+.+.. +..
T Consensus 319 WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~--cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~ 396 (539)
T PLN02590 319 WLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQT--CSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVV 396 (539)
T ss_pred eEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcC--EEEEEecCHHHHHHHhhcCHHHhCCcccccccCC
Confidence 9999999987543222 11 2379999999999886653 566665532 3222211 110
Q ss_pred -------hcCCCchHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCccc
Q 009167 386 -------VLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGG 456 (541)
Q Consensus 386 -------~~G~~~s~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~ 456 (541)
.++-....+..|+.++ +.+.+..++++..+.++++.+.|+++|..+-+.-|.+ +
T Consensus 397 d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l-----------------~ 459 (539)
T PLN02590 397 NYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYF-----------------S 459 (539)
T ss_pred CccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCce-----------------E
Confidence 0111123455666655 4466788899999999999999999888765554432 5
Q ss_pred EEEEEEcC
Q 009167 457 VVSFEVDG 464 (541)
Q Consensus 457 ~vsf~l~~ 464 (541)
++.|.+.+
T Consensus 460 iVcFr~~~ 467 (539)
T PLN02590 460 LVCFRLAP 467 (539)
T ss_pred EEEEEecC
Confidence 78888764
No 316
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.51 E-value=4.9e-12 Score=135.91 Aligned_cols=288 Identities=14% Similarity=0.116 Sum_probs=173.0
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc-------cCCCEEEEcCCCCcchHHHHHhh-------
Q 009167 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PAGGHIVTTTDCYRKTRIFIETV------- 269 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all-------~pGd~Vlv~~~~y~~~~~~~~~~------- 269 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++... ....+||.....|++.....-..
T Consensus 82 ~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~ 161 (428)
T PRK07986 82 GITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSM 161 (428)
T ss_pred ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhh
Confidence 45678888999999998754 567888999999999987432 12368999999998832111010
Q ss_pred ---cccCCeEEEEeC-----------CCCHHHHHHhccC--CCceEEEEeCC-CCCCCcccc----HHHHHHHHHhCCCE
Q 009167 270 ---LPKMGITATVID-----------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAI 328 (541)
Q Consensus 270 ---l~~~Gi~v~~vd-----------~~d~e~Le~al~~--~~tklV~lesP-~NPtG~i~d----l~~Ia~la~~~gi~ 328 (541)
.......+.+++ .+|++++++.++. +++.+|++|.. +...|.+.+ +++|.++|++||++
T Consensus 162 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~l 241 (428)
T PRK07986 162 HSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGIL 241 (428)
T ss_pred hhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 000001111221 1356777777752 24789999985 655565442 88999999999999
Q ss_pred EEEeCCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh---hhcCC--CchHHHHH
Q 009167 329 VCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGG--ALNPNAAY 397 (541)
Q Consensus 329 lIvDea~a~~-~-----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~---~~~G~--~~s~~~a~ 397 (541)
+|+||++... - .........|+++ ++|.++|+ -+..|.+++++++.+.+.... ...+. ..+|..+.
T Consensus 242 LI~DEv~tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~gG-~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~a 318 (428)
T PRK07986 242 LIADEIATGFGRTGKLFACEHAGIAPDILC--LGKALTGG-TMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACA 318 (428)
T ss_pred EEEeccccCCccCCCeeeecccCCCCCEEE--echhhhCC-cccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHH
Confidence 9999996321 1 1122233468886 89999743 134677778888888775421 01121 23566666
Q ss_pred HHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHH
Q 009167 398 LIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA 475 (541)
Q Consensus 398 l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~ 475 (541)
.++..++.+.. ..++..+..+++.+.|++. . .+|.+ .+.+|.|.++.+++... .....+.+.
T Consensus 319 aa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l---~--~~~~i----------~~vRg~Gl~~~ve~~~~-~~~~~~~~~ 382 (428)
T PRK07986 319 VANASLSLLESGDWQQQVAAIEAQLREELAPL---R--DAPMV----------ADVRVLGAIGVVETTRP-VNMAALQRF 382 (428)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH---h--cCCCE----------EeEeccceEEEEEeCCc-ccHHHHHHH
Confidence 66666665542 2344444455555555432 0 12211 23467888999999643 234566666
Q ss_pred ccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe----cCCCHHHHHHHHHHHHhh
Q 009167 476 LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF----GVEDFEDLKADVLQALHA 540 (541)
Q Consensus 476 L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv----G~e~~edli~dL~~AL~~ 540 (541)
+...|+.+... .+.|||.. ..++.+..++.|+++|++
T Consensus 383 l~~~Gl~~~~~----------------------------g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 383 FVEQGVWIRPF----------------------------GKLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHCCcEEEec----------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 65555433221 13456543 345667777777777753
No 317
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.51 E-value=1.4e-11 Score=133.50 Aligned_cols=287 Identities=15% Similarity=0.142 Sum_probs=166.7
Q ss_pred CCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc-----c--C
Q 009167 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP-----K--M 273 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l~-----~--~ 273 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++.. .....+||.....|+|........-. + +
T Consensus 93 ~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 172 (451)
T PRK06918 93 VMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGF 172 (451)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccC
Confidence 34578888999999999863 46788899999999998743 22345788888888884322211100 0 0
Q ss_pred C---eEEEEeCCCC-----------------HHHHHHhc----cCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhC
Q 009167 274 G---ITATVIDPAD-----------------MEGLEAAL----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (541)
Q Consensus 274 G---i~v~~vd~~d-----------------~e~Le~al----~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~ 325 (541)
+ ..+..++..+ ++.+++.+ ..+++.+|++|..+...|.+++ +++|.++|++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~ 252 (451)
T PRK06918 173 GPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH 252 (451)
T ss_pred CCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc
Confidence 1 1122221110 12344333 2235889999887766676664 77999999999
Q ss_pred CCEEEEeCCCCCC-Ccccc---cccC--CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHH
Q 009167 326 GAIVCIDGTFATP-LNQKA---LSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI 399 (541)
Q Consensus 326 gi~lIvDea~a~~-~~~~~---~~~g--aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~ 399 (541)
|+++|+||++... ....+ ..++ .|++ |++|.+++ | ...|++++++++++.+...........++..+.++
T Consensus 253 gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa 328 (451)
T PRK06918 253 GILFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSLGA-G-VPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAA 328 (451)
T ss_pred CCEEEEeccccCcCccCceehhHhcCCCCCEE--eeehhhcC-C-CccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHH
Confidence 9999999996532 11111 1223 6755 69999985 3 56889999988887765322211222355655554
Q ss_pred HHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-------CH
Q 009167 400 IRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DL 466 (541)
Q Consensus 400 l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-------~~ 466 (541)
+..++.+.. ..++..+..+.+.+.|++ ++.+.. .+|.|.++.+++.. +.
T Consensus 329 ~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~------------------vrg~G~~~~~~~~~~~~~~~~~~ 390 (451)
T PRK06918 329 LAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGD------------------VRGLGAMCAFELVQDRKTKEPDK 390 (451)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCcee------------------eccceeEEEEEEccCCCcCCCcH
Confidence 445544321 112222333444444433 222211 24568888887731 22
Q ss_pred HHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009167 467 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 467 ~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~ 539 (541)
....++...+...|+.+..++. ..+.|||++.+ ++.++.++.|.++|+
T Consensus 391 ~~~~~l~~~~~~~Gvlv~~~~~-------------------------~~~~lrl~p~l~~t~~~id~~l~~l~~~l~ 442 (451)
T PRK06918 391 TLTANICKEANKRGLLLLSAGT-------------------------YGNVIRVLMPLVITDEQLEEGLTIIEESLQ 442 (451)
T ss_pred HHHHHHHHHHHHCCeEEeecCC-------------------------CCCEEEEECCCccCHHHHHHHHHHHHHHHH
Confidence 3456777666666655443311 13679999865 334555556666554
No 318
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.50 E-value=4.6e-12 Score=136.23 Aligned_cols=287 Identities=13% Similarity=0.146 Sum_probs=175.1
Q ss_pred CCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcch-HHHHH-------
Q 009167 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKT-RIFIE------- 267 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g--~e~~i~~sSGs~Ai~~al~all~-------pG-d~Vlv~~~~y~~~-~~~~~------- 267 (541)
.+.++...+|.++|+++.+ .+.+.+++||++|+..+++.... +| .+|+.....|++. ...+.
T Consensus 83 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 162 (429)
T PRK06173 83 GFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTG 162 (429)
T ss_pred ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchh
Confidence 4567888899999999875 36788889999999999874321 33 5788888888883 11110
Q ss_pred --hhcccCCeEEEEeCC-----------CCHHHHHHhcc--CCCceEEEEeCC-CCCCCcccc----HHHHHHHHHhCCC
Q 009167 268 --TVLPKMGITATVIDP-----------ADMEGLEAALN--NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGA 327 (541)
Q Consensus 268 --~~l~~~Gi~v~~vd~-----------~d~e~Le~al~--~~~tklV~lesP-~NPtG~i~d----l~~Ia~la~~~gi 327 (541)
..+...--.+.+++. .+++.|++.+. .+++.+|++|.. .+..|.+.+ +++|.++|++||+
T Consensus 163 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~ 242 (429)
T PRK06173 163 MHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGV 242 (429)
T ss_pred hhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCC
Confidence 000000001122221 13566777774 235899999985 777777654 7799999999999
Q ss_pred EEEEeCCCCCCCc-------ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh---hhcCC--CchHHH
Q 009167 328 IVCIDGTFATPLN-------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGG--ALNPNA 395 (541)
Q Consensus 328 ~lIvDea~a~~~~-------~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~---~~~G~--~~s~~~ 395 (541)
++|+||++ +++. ........||++ ++|.++|+ -+..+.++.++++.+.+.... ..++. ..+|..
T Consensus 243 llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG-~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~ 318 (429)
T PRK06173 243 LLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKALTGG-YLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLA 318 (429)
T ss_pred eEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhhhCC-ccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHH
Confidence 99999996 3221 122233468887 89999643 234677778888887764210 11221 245777
Q ss_pred HHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHH
Q 009167 396 AYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFI 473 (541)
Q Consensus 396 a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l 473 (541)
+..++..++.+.. ..++..+..+++.+.|++.. .+|.+ ...+|.|.|+.+++... .....+.
T Consensus 319 ~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~-----~~~~v----------~~vRg~Gl~~~iel~~~-~~~~~i~ 382 (429)
T PRK06173 319 CAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAA-----EFDSV----------AEVRVLGAIGVVEMKEP-VNMATLQ 382 (429)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-----cCCCe----------eeeeccceEEEEEeCCc-ccHHHHH
Confidence 7776666666542 23444445555555555320 12211 12356788999999643 2345666
Q ss_pred HHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHhh
Q 009167 474 DALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 474 ~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlS----vG~e~~edli~dL~~AL~~ 540 (541)
+.|...|+-+...+ +.|||. +..++.+.+++.|+++|.+
T Consensus 383 ~~l~e~Gi~v~~~g----------------------------~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 383 PRFVEHGIWVRPFG----------------------------KLVYIMPPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred HHHHHCCeEEEecC----------------------------CEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 66655565443221 234444 3446777778888888764
No 319
>PRK06062 hypothetical protein; Provisional
Probab=99.50 E-value=1.2e-11 Score=134.02 Aligned_cols=203 Identities=13% Similarity=0.115 Sum_probs=131.9
Q ss_pred CccCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhc--c---c
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL--P---K 272 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l--~---~ 272 (541)
+....+.++...+|.++|+++.+. +.+.+++||++|+..+++.. .....+||.....|++.....-..- . .
T Consensus 87 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~ 166 (451)
T PRK06062 87 TVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWP 166 (451)
T ss_pred CcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCccccc
Confidence 334466788889999999998753 57888899999999998743 2234678888888888432111110 0 0
Q ss_pred -----CCeEEEEeC---------CCC-------HHHHHHhccC---CCceEEEEeCCCCCCCcccc----HHHHHHHHHh
Q 009167 273 -----MGITATVID---------PAD-------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (541)
Q Consensus 273 -----~Gi~v~~vd---------~~d-------~e~Le~al~~---~~tklV~lesP~NPtG~i~d----l~~Ia~la~~ 324 (541)
.|+.....+ .+| ++.+++.++. +++.+|++|......|.+.| +++|.++|++
T Consensus 167 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~ 246 (451)
T PRK06062 167 NDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDR 246 (451)
T ss_pred CCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH
Confidence 111111001 012 5677777742 35889999999888898888 9999999999
Q ss_pred CCCEEEEeCCCCCC----C--cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCC--CchHHHH
Q 009167 325 KGAIVCIDGTFATP----L--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNAA 396 (541)
Q Consensus 325 ~gi~lIvDea~a~~----~--~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~--~~s~~~a 396 (541)
||+++|+||++... . .........|+++ ++|.++++- +..|.+++++++++.+.......+. .-+|..+
T Consensus 247 ~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t--~gK~lggG~-~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~ 323 (451)
T PRK06062 247 HGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLIT--FAKGVNSGY-VPLGGVAISEAIAATFADRPYPGGLTYSGHPLAC 323 (451)
T ss_pred cCCEEEeeccccCCCcCcHHHHHHhcCCCCCeee--echhhhcCC-cCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHH
Confidence 99999999996532 1 1222334568776 899998641 2356677778888776532111221 2247777
Q ss_pred HHHHHhHHHHH
Q 009167 397 YLIIRGMKTLH 407 (541)
Q Consensus 397 ~l~l~~l~tl~ 407 (541)
..++..|+.+.
T Consensus 324 Aaa~a~L~~l~ 334 (451)
T PRK06062 324 AAAVATINAME 334 (451)
T ss_pred HHHHHHHHHHH
Confidence 77666676653
No 320
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=1.6e-13 Score=141.42 Aligned_cols=211 Identities=20% Similarity=0.241 Sum_probs=166.0
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~L 288 (541)
...+.++|+.+|++.|.+++++|+-|-..+.+.+.+++.||.-|+.....|.+.. .-++.-|..++.+..+|.++|
T Consensus 181 ~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~----~GaRLSgAtiRVfkHNdm~~L 256 (519)
T KOG1357|consen 181 TEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLI----TGARLSGATTRVFRHNDMQGL 256 (519)
T ss_pred HHHHHHHHHHHHHhcCCcceEEEeccccccccCcceeecCCcceeeccccchhee----ccccccCceEEEEecCCHHHH
Confidence 3567899999999999999999999999999999999999999999988887743 334555888888999999999
Q ss_pred HHhccCC------------CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc----------cccccc
Q 009167 289 EAALNNN------------NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----------QKALSL 346 (541)
Q Consensus 289 e~al~~~------------~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~----------~~~~~~ 346 (541)
|+.|++. +.-+|++|.....-|.+.++.++.++++++..+++.||++..+.. ..+...
T Consensus 257 Er~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~ 336 (519)
T KOG1357|consen 257 ERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPE 336 (519)
T ss_pred HHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCch
Confidence 8887531 234778888999999999999999999999999999999654332 112234
Q ss_pred CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCCchHHHHHHHHHhHHHH---------HHHHHHHHH
Q 009167 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---------HLRVQQQNS 415 (541)
Q Consensus 347 gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~s~~~a~l~l~~l~tl---------~~r~~~~~~ 415 (541)
.+||+..+++|.++.. ||++.+++++++.++... ..++..++|..+...+.+++.+ .+++++..+
T Consensus 337 dvDImMGtftKSfga~----GGyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ 412 (519)
T KOG1357|consen 337 DVDIMMGTFTKSFGAA----GGYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAE 412 (519)
T ss_pred hheeecceehhhcccc----cceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHh
Confidence 5789999999999865 599999999999887533 3456667777666666666543 456677777
Q ss_pred HHHHHHHHHHhC
Q 009167 416 TALRMAKILEAH 427 (541)
Q Consensus 416 ~a~~la~~L~~~ 427 (541)
|...+...|++.
T Consensus 413 ns~yfr~~l~~~ 424 (519)
T KOG1357|consen 413 NSRYFRWELQKM 424 (519)
T ss_pred hhHHHHHhhhcC
Confidence 877777766654
No 321
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.49 E-value=1.9e-11 Score=121.07 Aligned_cols=213 Identities=19% Similarity=0.205 Sum_probs=154.4
Q ss_pred HHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-----
Q 009167 212 TVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (541)
Q Consensus 212 ~~~Le~~LA~l~g~e---~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~----- 283 (541)
.+++.+-+-..+... .-++-++|+.+++.++..++.|||.|++-...-.+-+ +...++++|++|..++.+
T Consensus 52 m~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~r--a~D~~~r~ga~V~~v~~~~G~~~ 129 (385)
T KOG2862|consen 52 MDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQR--AADCARRYGAEVDVVEADIGQAV 129 (385)
T ss_pred HHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHH--HHHHHHhhCceeeEEecCcccCc
Confidence 445566666666542 2455568889999999999999999988765444422 335688999999988643
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCCCcccc-HHHHHHHHHhCCCEEEEeCCCCC-CCcccccccCCcEEEECCccccCC
Q 009167 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIGG 361 (541)
Q Consensus 284 d~e~Le~al~~~~tklV~lesP~NPtG~i~d-l~~Ia~la~~~gi~lIvDea~a~-~~~~~~~~~gaDivv~S~sK~lgg 361 (541)
.++.|++++.++++++|++++-..-||.++| ++.+.++||+|+++++||.+..- ...+...++|+|+......|.+++
T Consensus 130 ~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~a 209 (385)
T KOG2862|consen 130 PLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGA 209 (385)
T ss_pred cHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCC
Confidence 6899999998888999999999899999999 66778999999999999998543 334566688999999889999998
Q ss_pred CCCceEEEEEeChHHHHHHHHHhh--------------hcCC---------CchH-----HHHHHHHHhHHHHHHHHHHH
Q 009167 362 HNDVLAGSISGSGKLVTQIRNLHH--------------VLGG---------ALNP-----NAAYLIIRGMKTLHLRVQQQ 413 (541)
Q Consensus 362 ~gd~~gG~lv~~~~li~~l~~~~~--------------~~G~---------~~s~-----~~a~l~l~~l~tl~~r~~~~ 413 (541)
+.+ .+.+..++...++++.... .+|. +++. +.+++.+-.-+-++.+.+++
T Consensus 210 P~G--LsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH 287 (385)
T KOG2862|consen 210 PAG--LSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRH 287 (385)
T ss_pred CCC--cceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 864 3567777777777653221 1121 1221 12222222223466778888
Q ss_pred HHHHHHHHHHHHhCC
Q 009167 414 NSTALRMAKILEAHP 428 (541)
Q Consensus 414 ~~~a~~la~~L~~~p 428 (541)
.++.+++...|+++.
T Consensus 288 ~e~s~~l~~~l~~~G 302 (385)
T KOG2862|consen 288 REMSKWLKLSLEALG 302 (385)
T ss_pred HHHHHHHHHHHHHhC
Confidence 888888888888764
No 322
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.49 E-value=2.9e-11 Score=131.00 Aligned_cols=284 Identities=15% Similarity=0.110 Sum_probs=168.1
Q ss_pred CchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhc-----cc--CC--
Q 009167 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL-----PK--MG-- 274 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l-----~~--~G-- 274 (541)
.++...+|.++|+++.+. +.+.+++||++|+..+++.. .....+||.....|++......... .+ ++
T Consensus 94 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 173 (457)
T PRK05639 94 HSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPL 173 (457)
T ss_pred CCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCC
Confidence 357777899999998764 56888899999999998743 2334578888888888432111110 00 11
Q ss_pred -eEEEEeCCC-------------CH--------HHHHHhc-----cCCCceEEEEeCCCCCCCcccc----HHHHHHHHH
Q 009167 275 -ITATVIDPA-------------DM--------EGLEAAL-----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 275 -i~v~~vd~~-------------d~--------e~Le~al-----~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~ 323 (541)
-.+.+++.. +. +.+++.+ ..+++.+|++|......|.+.| +++|.++|+
T Consensus 174 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~ 253 (457)
T PRK05639 174 MPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLD 253 (457)
T ss_pred CCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 112333221 12 2345443 1235899999999887787665 789999999
Q ss_pred hCCCEEEEeCCCCCC----C--cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHH
Q 009167 324 KKGAIVCIDGTFATP----L--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAY 397 (541)
Q Consensus 324 ~~gi~lIvDea~a~~----~--~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~ 397 (541)
+||+++|+||++... . ........+|+++ ++|.++++ ...|++++++++++.... ........+|..+.
T Consensus 254 ~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG--~pi~av~~~~~i~~~~~~-~~~~T~~g~p~~~a 328 (457)
T PRK05639 254 EHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVASG--MGLSGVIGRKELMDLTSG-SALLTPAANPVISA 328 (457)
T ss_pred HcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcCC--CcceeEEehHHHHhhcCC-CcccCCCcCHHHHH
Confidence 999999999996521 1 1122334578888 89999864 345788888888773211 11111224566666
Q ss_pred HHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-----H
Q 009167 398 LIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----L 466 (541)
Q Consensus 398 l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-----~ 466 (541)
.++..++.+.. ..++..+..+++.+.|++ ++.+. +.+|.|.|+.+++..+ .
T Consensus 329 aa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~------------------~VrG~Gl~~gve~~~~~~~~~~ 390 (457)
T PRK05639 329 AAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIG------------------DVRGKGLMIGVEIVKENGKPDP 390 (457)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEE------------------eeccceeEEEEEEecCCCCCCH
Confidence 66666665432 122333334444444443 23222 2367889999998421 2
Q ss_pred HHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009167 467 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 539 (541)
Q Consensus 467 ~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e----~~edli~dL~~AL~ 539 (541)
+....+.+.+...|+-+... +...+.|||+.-+- +.+.+++.|+++|+
T Consensus 391 ~~~~~~~~~~~~~Gv~~~~~-------------------------g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~ 442 (457)
T PRK05639 391 ELTGKICWRAFELGLILPSY-------------------------GMFGNVIRITPPLVITKEIAEKGLEIMERAIK 442 (457)
T ss_pred HHHHHHHHHHHhCCeEEeec-------------------------CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH
Confidence 33456666665555433221 11245788876654 44555555555554
No 323
>PRK07481 hypothetical protein; Provisional
Probab=99.49 E-value=1.7e-11 Score=132.59 Aligned_cols=289 Identities=12% Similarity=0.116 Sum_probs=169.0
Q ss_pred CCchhHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHhhc-----
Q 009167 207 YGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVL----- 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g---~e~~i~~sSGs~Ai~~al~all~-------pG-d~Vlv~~~~y~~~~~~~~~~l----- 270 (541)
+.++...+|.++|+++.+ .+.+.+++||++|+..+++.... +| .+||.....|++........-
T Consensus 83 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 162 (449)
T PRK07481 83 TTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVF 162 (449)
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccc
Confidence 467888899999999874 35678889999999999874321 23 578898988988321110100
Q ss_pred ----ccCCeEEEEeC--------C--CCHHH--------HHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHHHH
Q 009167 271 ----PKMGITATVID--------P--ADMEG--------LEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (541)
Q Consensus 271 ----~~~Gi~v~~vd--------~--~d~e~--------Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia~l 321 (541)
......+..++ . .|+++ +++.+. ++++.+|++|......|.+.+ +++|.++
T Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~l 242 (449)
T PRK07481 163 RRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREV 242 (449)
T ss_pred ccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHH
Confidence 00001112221 1 14333 344342 235899999999877787765 8899999
Q ss_pred HHhCCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-----hhcCCC
Q 009167 322 CHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGA 390 (541)
Q Consensus 322 a~~~gi~lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-----~~~G~~ 390 (541)
|++||+++|.||++... +........+|+++ ++|.++++- +..|.+++++++++.+.... ...+.+
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T 319 (449)
T PRK07481 243 CDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMC--LAKGITSGY-VPLGATMVNARIADAFEANADFGGAIMHGYT 319 (449)
T ss_pred HHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEE--EeecccCCC-cCceEEEEcHHHHHHHhccCccccccccCCC
Confidence 99999999999995421 11222344578888 789998642 23677888888887765311 112222
Q ss_pred --chHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-
Q 009167 391 --LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD- 465 (541)
Q Consensus 391 --~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~- 465 (541)
-+|..+..++..++.+.. ..++..+.-+++.+.|++... .+|. ..+.+|.|.|+.+++..+
T Consensus 320 ~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~----------i~~vrG~Glm~gi~l~~~~ 385 (449)
T PRK07481 320 YSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKE----RFEL----------VGDVRGKGLMLALDLVADK 385 (449)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh----cCCC----------eEEEeecceEEEEEecccc
Confidence 256666666666665432 123333334444444443200 0111 122367889999998521
Q ss_pred ---------HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe----cCCCHHHHHH
Q 009167 466 ---------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF----GVEDFEDLKA 532 (541)
Q Consensus 466 ---------~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv----G~e~~edli~ 532 (541)
......+...+...|+-+... .+.+||+. ..++.+.+++
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----------------------------g~~i~l~Ppl~it~~eid~~~~ 437 (449)
T PRK07481 386 ATREPIDPSKGYANAVADVARENGVLVRPS----------------------------GTKIILSPPLVIQREDVDRIVD 437 (449)
T ss_pred cccCCCCchhHHHHHHHHHHHhCCeEEEec----------------------------CCEEEEECCCCCCHHHHHHHHH
Confidence 123345555554444433221 12356663 3456677777
Q ss_pred HHHHHHhh
Q 009167 533 DVLQALHA 540 (541)
Q Consensus 533 dL~~AL~~ 540 (541)
.|+++|++
T Consensus 438 ~l~~~l~~ 445 (449)
T PRK07481 438 ALDAGLSA 445 (449)
T ss_pred HHHHHHHh
Confidence 77777765
No 324
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.49 E-value=3.8e-11 Score=129.72 Aligned_cols=252 Identities=13% Similarity=0.127 Sum_probs=151.9
Q ss_pred CCCchhHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhc-----c----
Q 009167 206 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL-----P---- 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g---~e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l-----~---- 271 (541)
.+.++...+|.++|+++.+ .+.+++++||++|+..+++.. ....++|+.....|++.....-..- .
T Consensus 93 ~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 172 (441)
T PRK05769 93 DFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGF 172 (441)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCC
Confidence 4667888899999999875 256788899999999998743 2234678888888888432211110 0
Q ss_pred -cCCeEEEEeCC----------CC--------HHHHHH-hcc----CCCceEEEEeCCCCCCCcccc----HHHHHHHHH
Q 009167 272 -KMGITATVIDP----------AD--------MEGLEA-ALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 272 -~~Gi~v~~vd~----------~d--------~e~Le~-al~----~~~tklV~lesP~NPtG~i~d----l~~Ia~la~ 323 (541)
...-.+..++. .+ ++.+++ .++ .+++.+|++|......|.+.| +++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~ 252 (441)
T PRK05769 173 FPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLAD 252 (441)
T ss_pred CCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHH
Confidence 00011222221 11 233555 222 235899999999888899888 999999999
Q ss_pred hCCCEEEEeCCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-hhhcCCCchHHHH
Q 009167 324 KKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-HHVLGGALNPNAA 396 (541)
Q Consensus 324 ~~gi~lIvDea~a~~-~-----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-~~~~G~~~s~~~a 396 (541)
+||+++|+||++... . .........|+++ ++|.++++ ..+|++++++++++.+... ...++ .+|..+
T Consensus 253 ~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt--~~K~l~~G--~p~gav~~~~~i~~~~~~~~~~T~~--g~p~~~ 326 (441)
T PRK05769 253 KYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIIT--LAKAIAGG--LPLGAVIGRAELMFLPPGSHANTFG--GNPVAA 326 (441)
T ss_pred HcCCEEEEechhhCCCcccceehhhccCCCCCEEE--EcccccCC--cccEEEEEehhhhhcCCCCCCCCCC--cCHHHH
Confidence 999999999996531 1 1111223468876 78999853 4578888888876433211 11222 256666
Q ss_pred HHHHHhHHHHHH-HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-----H
Q 009167 397 YLIIRGMKTLHL-RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----L 466 (541)
Q Consensus 397 ~l~l~~l~tl~~-r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-----~ 466 (541)
..++..++.+.. ..++..+..+++.+.|++ ++.+. ..+|.|.++.+++..+ .
T Consensus 327 aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~------------------~vrg~G~~~~i~~~~~~~~~~~ 388 (441)
T PRK05769 327 AAALATLEELEEGLLENAQKLGEYLRKELKELKEKYEFIG------------------DVRGLGLMIGVELVKDRKEPDP 388 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCee------------------eeecceEEEEEEeccCCccccH
Confidence 666666665543 223333444445554443 22221 2356788999999532 1
Q ss_pred HHHHHHHHHccCcCe
Q 009167 467 TATIKFIDALKIPYI 481 (541)
Q Consensus 467 ~~~~~~l~~L~~~~i 481 (541)
.....+.+.+...|+
T Consensus 389 ~~~~~~~~~~~~~Gi 403 (441)
T PRK05769 389 KLRDKVLYEAFKRGL 403 (441)
T ss_pred HHHHHHHHHHHhCCc
Confidence 234455555544443
No 325
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.49 E-value=7.4e-12 Score=134.39 Aligned_cols=257 Identities=14% Similarity=0.125 Sum_probs=152.2
Q ss_pred CCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHhhcc----
Q 009167 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP---- 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g--~e~~i~~sSGs~Ai~~al~all~-------pG-d~Vlv~~~~y~~~~~~~~~~l~---- 271 (541)
.+.++...+|.++|+++.+ .+.+.+++||++|+..+++.... +| .+|+.....|++.....-..-.
T Consensus 79 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~ 158 (422)
T PRK05630 79 GLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGG 158 (422)
T ss_pred CcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCccc
Confidence 3567778899999999874 36788899999999999874321 22 5789989888883211111100
Q ss_pred ---cCC---eEEEEeCC--------CC----HHHHHHhccCCCceEEEEeCC-CCCCCcccc----HHHHHHHHHhCCCE
Q 009167 272 ---KMG---ITATVIDP--------AD----MEGLEAALNNNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAI 328 (541)
Q Consensus 272 ---~~G---i~v~~vd~--------~d----~e~Le~al~~~~tklV~lesP-~NPtG~i~d----l~~Ia~la~~~gi~ 328 (541)
.++ ..+.+++. .+ .+.+++.+.+ ++.+|++|.. ....|.+.+ +++|.++|++||++
T Consensus 159 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~l 237 (422)
T PRK05630 159 MHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDIL 237 (422)
T ss_pred ccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 000 01122221 11 2445555554 5999999985 777776654 77999999999999
Q ss_pred EEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh----hhcCC--CchHHHH
Q 009167 329 VCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLGG--ALNPNAA 396 (541)
Q Consensus 329 lIvDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~----~~~G~--~~s~~~a 396 (541)
+|+||++... -. ........||++ +.|.++|+- ..+|++++++++.+.+.... ..++. ..+|..+
T Consensus 238 lI~DEv~tG~GrtG~~~a~~~~gv~PDi~t--~gK~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~ 314 (422)
T PRK05630 238 LIADEIATGFGRTGELFATLAAGVTPDIMC--VGKALTGGF-MSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLAC 314 (422)
T ss_pred EEEecceeCCCcCchhhHHHhcCCCCCeee--eechhhcCc-cccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHH
Confidence 9999996321 11 112233467885 899996531 23678888888887764210 01122 2456666
Q ss_pred HHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHH
Q 009167 397 YLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 474 (541)
Q Consensus 397 ~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~ 474 (541)
..++..++.+.. ..++..+...++.+.|+.. . .+|.+ .+.+|.|.|+.+++... .....+.+
T Consensus 315 aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l---~--~~~~v----------~~vRg~Gl~~~ie~~~~-~~~~~~~~ 378 (422)
T PRK05630 315 AVAHASLEIIETGMWRKQVKRIEAELIAGLSPL---A--HLPGV----------ADVRVLGAIGVVEMEQP-VDMEEATQ 378 (422)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHh---h--cCCCe----------eeeeccccEEEEEECCc-ccHHHHHH
Confidence 666666665532 1233334444444444421 1 12221 23467899999999642 22345555
Q ss_pred HccCcCee
Q 009167 475 ALKIPYIA 482 (541)
Q Consensus 475 ~L~~~~ia 482 (541)
.+...++-
T Consensus 379 ~~~~~Gl~ 386 (422)
T PRK05630 379 AAVDHGVW 386 (422)
T ss_pred HHHHCCeE
Confidence 55544543
No 326
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.48 E-value=5.4e-12 Score=144.31 Aligned_cols=212 Identities=15% Similarity=0.144 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 212 TVVVEEKMSALEGAEST-VIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 212 ~~~Le~~LA~l~g~e~~-i~~sSGs~Ai~~al~all~--------pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
..++++.|+++.|.+.+ +..++|+.|..+.++++-. ..+.|+++...|+..... +...|++++.++.
T Consensus 532 i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPas----a~~~G~~Vv~V~~ 607 (939)
T TIGR00461 532 IAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPAS----AAMAGMQVVPVNC 607 (939)
T ss_pred HHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHH----HHHCCCEEEEecc
Confidence 45789999999999754 4445566666554444321 235799999999776432 4455888888865
Q ss_pred C-----CHHHHHHhccC--CCceEEEEeCCCCCCCcccc-HHHHHHHHHhCCCEEEEeCCCCC--CCcccccccCCcEEE
Q 009167 283 A-----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLVL 352 (541)
Q Consensus 283 ~-----d~e~Le~al~~--~~tklV~lesP~NPtG~i~d-l~~Ia~la~~~gi~lIvDea~a~--~~~~~~~~~gaDivv 352 (541)
+ |+++|++++++ .++++|++.+|+| +|.+.| +++|+++||++|.++++|.++.. ....+|.++|+|+++
T Consensus 608 d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~ 686 (939)
T TIGR00461 608 DQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCH 686 (939)
T ss_pred CCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEE
Confidence 3 89999999974 2599999999999 788877 99999999999999999999744 234566788999999
Q ss_pred ECCccccCC-C--CCceEEEEEeChHHHHHHHHH--h---------hhcCCCc----h----HHHHHH--HHHhHHHHHH
Q 009167 353 HSATKFIGG-H--NDVLAGSISGSGKLVTQIRNL--H---------HVLGGAL----N----PNAAYL--IIRGMKTLHL 408 (541)
Q Consensus 353 ~S~sK~lgg-~--gd~~gG~lv~~~~li~~l~~~--~---------~~~G~~~----s----~~~a~l--~l~~l~tl~~ 408 (541)
+|.||+|++ + |+.-.|++..++.+...+... . ...|... + ...+|+ .+-|-+-+..
T Consensus 687 ~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~ 766 (939)
T TIGR00461 687 LNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPK 766 (939)
T ss_pred ecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHH
Confidence 999997662 2 222368888876654433210 0 0011111 1 122333 2223344555
Q ss_pred HHHHHHHHHHHHHHHHHhCC
Q 009167 409 RVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 409 r~~~~~~~a~~la~~L~~~p 428 (541)
..+....++.++++.|.++.
T Consensus 767 ~a~~ailnAnYl~~rL~~~~ 786 (939)
T TIGR00461 767 ASVVAILNANYMATRLKDHY 786 (939)
T ss_pred HHHHHHHHHHHHHHHhhccC
Confidence 55566678889999888753
No 327
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.48 E-value=1.6e-12 Score=145.25 Aligned_cols=176 Identities=16% Similarity=0.147 Sum_probs=130.9
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC---
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
+.....+.++..|+++|++...++.+|+ .+|..++++++++||.|++++++|.+.+.. .+...|...+++.+.
T Consensus 172 ~eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hg---aLiLsGa~PVYl~P~~n~ 248 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHG---ALIQAGATPVYLETARNP 248 (720)
T ss_pred CChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHH---HHHHcCCeEEEeeccccc
Confidence 3445778899999999999999999998 789999999999999999999999987652 122346666665421
Q ss_pred -------C-----HHHHHHhccCC---------CceEEEEeCCCCCCCccccHHHHHHH-HHhCCCEEEEeCCCCCCCcc
Q 009167 284 -------D-----MEGLEAALNNN---------NVSLFFTESPTNPFLRCVDVKLVSDL-CHKKGAIVCIDGTFATPLNQ 341 (541)
Q Consensus 284 -------d-----~e~Le~al~~~---------~tklV~lesP~NPtG~i~dl~~Ia~l-a~~~gi~lIvDea~a~~~~~ 341 (541)
+ .+.|+++|+++ ..+++++.+|+ ..|.+.|++.|+++ ++.++ +|++||+|+....+
T Consensus 249 ~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F 326 (720)
T PRK13578 249 FGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQF 326 (720)
T ss_pred cCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-cEEEeCcchhhhcc
Confidence 3 45588877643 15899997777 67999999999998 68888 99999998764322
Q ss_pred c---------ccccCCc----EEEECCccccCCCCCceEEEEEeChHH---------HHHHHHHhhhcCCC
Q 009167 342 K---------ALSLGAD----LVLHSATKFIGGHNDVLAGSISGSGKL---------VTQIRNLHHVLGGA 390 (541)
Q Consensus 342 ~---------~~~~gaD----ivv~S~sK~lgg~gd~~gG~lv~~~~l---------i~~l~~~~~~~G~~ 390 (541)
. .++.|+| +++.|.||.+++.. .+.++-.+... .++++.....+.++
T Consensus 327 ~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alT--QaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qST 395 (720)
T PRK13578 327 IPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFS--QTSQIHKKDNHIKGQARYCPHKRLNNAFMLHAST 395 (720)
T ss_pred CcccccCChhhhhcCCCCCCeEEEEChhhcchhhh--hHhhhhcCCcccccccccCCHHHHHHHHHHHcCC
Confidence 2 2467999 99999999999765 45555443322 24555555555443
No 328
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.48 E-value=9.4e-12 Score=131.54 Aligned_cols=292 Identities=17% Similarity=0.171 Sum_probs=180.3
Q ss_pred ccCCCCchhHHHHHHHHHHHhC-C--CcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCCcchH--------
Q 009167 203 EYGRYGNPTTVVVEEKMSALEG-A--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTR-------- 263 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g-~--e~~i~~sSGs~Ai~~al~all-------~pG-d~Vlv~~~~y~~~~-------- 263 (541)
.++-...| ..+|.++|+++.+ . +.++++.||++|++.+++-.+ +|. .++|.-...|++..
T Consensus 81 ~~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g 159 (449)
T COG0161 81 FGGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGG 159 (449)
T ss_pred hcccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccC
Confidence 34445667 8899999999998 3 567888899999999987432 233 34888888998731
Q ss_pred --HHHHhhcccCCeEEEEeCC-----------------CCHHHHHHhccC---CCceEEEEeCCCCC-CCcccc----HH
Q 009167 264 --IFIETVLPKMGITATVIDP-----------------ADMEGLEAALNN---NNVSLFFTESPTNP-FLRCVD----VK 316 (541)
Q Consensus 264 --~~~~~~l~~~Gi~v~~vd~-----------------~d~e~Le~al~~---~~tklV~lesP~NP-tG~i~d----l~ 316 (541)
..........-..+..++. ...++|++.+.. +++.++++|....- .|.++| ++
T Consensus 160 ~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~ 239 (449)
T COG0161 160 PVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLK 239 (449)
T ss_pred chhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHH
Confidence 1111111111111111211 114566766653 46889999998876 777776 88
Q ss_pred HHHHHHHhCCCEEEEeCCCCC------CCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-hh--hc
Q 009167 317 LVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-HH--VL 387 (541)
Q Consensus 317 ~Ia~la~~~gi~lIvDea~a~------~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-~~--~~ 387 (541)
++.++|++|||++|.||+... .+.........||++ ++|.+.++-- ..|.++.++++.+.+..- .. ..
T Consensus 240 ~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~--~aKGLT~GY~-Pl~a~l~~~~I~~~~~~~~~~~f~H 316 (449)
T COG0161 240 RVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILC--LAKGLTGGYL-PLSAVLTSDRIYEAFSDGDAGAFMH 316 (449)
T ss_pred HHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeee--ecccccccch-hhHhHhhhHHHHHHHhcccCCeecc
Confidence 999999999999999999321 222333334578888 8899987653 345555667777776643 21 12
Q ss_pred C--CCchHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEE
Q 009167 388 G--GALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVS 459 (541)
Q Consensus 388 G--~~~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vs 459 (541)
| -+-+|.+++.++..|+-++. .+++..+...++.+.|+. +|.|..| ++.|.|..
T Consensus 317 G~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdV------------------R~~Gli~~ 378 (449)
T COG0161 317 GHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDV------------------RGLGLIGA 378 (449)
T ss_pred CCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEe------------------eccceEEE
Confidence 2 23468888888888776542 233344444555555543 2344333 55778888
Q ss_pred EEEcCCHH--------HHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHH
Q 009167 460 FEVDGDLT--------ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLK 531 (541)
Q Consensus 460 f~l~~~~~--------~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli 531 (541)
+|+..+.. ...++.+.+...|+-+...+. .+...|+ +.+..++.++++
T Consensus 379 iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g~-~i~~~PP-----------------------liit~~eid~l~ 434 (449)
T COG0161 379 IELVADKATKTPFEARVGARVRAAALERGLLIRPLGD-VIYLMPP-----------------------LIITREEIDELV 434 (449)
T ss_pred EEEecccccccchhhhHHHHHHHHHHHCCeEEeecCC-EEEEcCC-----------------------ccCCHHHHHHHH
Confidence 99864321 245566666556766664433 2222232 334557788888
Q ss_pred HHHHHHHhh
Q 009167 532 ADVLQALHA 540 (541)
Q Consensus 532 ~dL~~AL~~ 540 (541)
+.+.++|+.
T Consensus 435 ~~l~~al~~ 443 (449)
T COG0161 435 DALREALDE 443 (449)
T ss_pred HHHHHHHHH
Confidence 888888874
No 329
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.47 E-value=2.9e-11 Score=131.24 Aligned_cols=233 Identities=12% Similarity=0.096 Sum_probs=140.5
Q ss_pred CCCchhHHHHHHHHHHHhCCC-----cEEEe-CCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhhcc------
Q 009167 206 RYGNPTTVVVEEKMSALEGAE-----STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP------ 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e-----~~i~~-sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~~~l~------ 271 (541)
.+.++...+|.++|.++...+ ..+++ +||++|+..+++... ....+||.....|++........-.
T Consensus 102 ~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~ 181 (464)
T PRK06938 102 DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKK 181 (464)
T ss_pred ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccc
Confidence 456788888989998876532 35565 699999999997432 2346788888888884322111100
Q ss_pred cCC---eEEEEeCCC-----------------CHHHHHHhccC-----CCceEEEEeCCCCCCCcccc----HHHHHHHH
Q 009167 272 KMG---ITATVIDPA-----------------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 272 ~~G---i~v~~vd~~-----------------d~e~Le~al~~-----~~tklV~lesP~NPtG~i~d----l~~Ia~la 322 (541)
.++ ..+.+++.. +++.+++.+.+ +++.+|++|......|.+.| +++|.++|
T Consensus 182 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc 261 (464)
T PRK06938 182 PLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRIT 261 (464)
T ss_pred cCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 000 112233211 25667777752 14899999998877787765 78999999
Q ss_pred HhCCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCC--chHH
Q 009167 323 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPN 394 (541)
Q Consensus 323 ~~~gi~lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~--~s~~ 394 (541)
++||+++|.||++... +........+|+++ ++|.++|+ ...|.+++++++ +.+... .++.+ -+|.
T Consensus 262 ~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gKglggG--~PlsAv~~~~~~-~~~~~~--~~~~T~~gnpl 334 (464)
T PRK06938 262 EEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVV--LSKAIGGS--LPLAVVVYREWL-DTWQPG--AHAGTFRGNQM 334 (464)
T ss_pred HHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEE--eeccccCC--CceEEEeehhHh-hccCCC--CCCCCCCcCHH
Confidence 9999999999995422 11223344578888 78999864 456777777664 433211 12222 3466
Q ss_pred HHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 395 AAYLIIRGMKTLHLR--VQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 395 ~a~l~l~~l~tl~~r--~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
.+..++..|+.+... .++..+.-+++.+.|++ +|.+. ..+|.|.|+.+++.
T Consensus 335 a~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~------------------~VrG~Glm~gie~~ 391 (464)
T PRK06938 335 AMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLG------------------DVRGRGLMLGVEIV 391 (464)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCee------------------eeeccceEEEEEec
Confidence 666666666655321 12222223333333332 33322 23678899999995
No 330
>PRK07480 putative aminotransferase; Validated
Probab=99.47 E-value=1.7e-11 Score=132.83 Aligned_cols=240 Identities=16% Similarity=0.193 Sum_probs=145.1
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHhh------
Q 009167 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV------ 269 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~-------pG-d~Vlv~~~~y~~~~~~~~~~------ 269 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++.... +| .+||.....|++........
T Consensus 90 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~ 169 (456)
T PRK07480 90 KTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYM 169 (456)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhh
Confidence 45688889999999999854 5788899999999999874321 23 46888888888842111000
Q ss_pred cccCCe---EEEEeCCC---------------C--HHHHHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHHHHH
Q 009167 270 LPKMGI---TATVIDPA---------------D--MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 270 l~~~Gi---~v~~vd~~---------------d--~e~Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia~la 322 (541)
-...+. .+..++.. + ++.+++.+. .+++.+|++|......|.+.+ +++|.++|
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc 249 (456)
T PRK07480 170 HEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRIC 249 (456)
T ss_pred hcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 000110 11222210 1 255655442 135899999999887888776 88999999
Q ss_pred HhCCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH-Hh-hhcCC--Cch
Q 009167 323 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LH-HVLGG--ALN 392 (541)
Q Consensus 323 ~~~gi~lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~-~~-~~~G~--~~s 392 (541)
++||+++|+||++... +.........|+++ ++|.++++- ...|.+++++++.+.+.. .. ...+. .-+
T Consensus 250 ~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gn 326 (456)
T PRK07480 250 RKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT--IAKGLTSGY-IPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGH 326 (456)
T ss_pred HHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee--eehhhccCC-ccceEEEEcHHHHHHHhcCCCCcccCCCCCcC
Confidence 9999999999996321 11222334468876 789998641 235677778888877631 11 11222 235
Q ss_pred HHHHHHHHHhHHHHHH--HHHHH-HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 393 PNAAYLIIRGMKTLHL--RVQQQ-NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 393 ~~~a~l~l~~l~tl~~--r~~~~-~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
|..+..++..|+.+.. ..++. .+..+++.+.|++. . .+|. ..+.+|.|.|+.+++.
T Consensus 327 pl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l---~--~~~~----------i~~vrG~Glm~gie~~ 385 (456)
T PRK07480 327 PVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLREL---A--DHPL----------VGEVRGVGLVGAIELV 385 (456)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh---h--cCCC----------eeeEEeecceEEEEEe
Confidence 6777776666665532 12222 13334444444431 1 1221 1233678899999994
No 331
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.47 E-value=1.8e-11 Score=132.93 Aligned_cols=215 Identities=16% Similarity=0.169 Sum_probs=138.8
Q ss_pred CchhHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhh----------cccCC
Q 009167 208 GNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV----------LPKMG 274 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g-~e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~----------l~~~G 274 (541)
.++...+|.++|.+..+ .+.+.+++||++|+..+++.. ....++|+.....|++....+... ....|
T Consensus 137 ~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g 216 (474)
T PLN02482 137 PCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPG 216 (474)
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCC
Confidence 56667788888888875 467888999999999998743 223468888888898843221100 00111
Q ss_pred e------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCC---
Q 009167 275 I------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL--- 339 (541)
Q Consensus 275 i------~v~~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~--- 339 (541)
+ .+..++.+|++++++.+.. +++.+|++|......|.+.| +++|.++|++||+++|+||++....
T Consensus 217 ~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~ 296 (474)
T PLN02482 217 VPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAY 296 (474)
T ss_pred CCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCc
Confidence 1 2344566789999988853 24889999999888888877 5689999999999999999963211
Q ss_pred --cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-hhcCCC--chHHHHHHHHHhHHHHHH--HHHH
Q 009167 340 --NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGA--LNPNAAYLIIRGMKTLHL--RVQQ 412 (541)
Q Consensus 340 --~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-~~~G~~--~s~~~a~l~l~~l~tl~~--r~~~ 412 (541)
.........|+++ ++|.++++ ...|.+++++++++.+.... ..++++ .+|..+.+++..|+.+.. ..++
T Consensus 297 ~ga~~~~gv~PDi~t--~gK~lggG--~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~ 372 (474)
T PLN02482 297 GGAQEYFGITPDLTT--LGKVIGGG--LPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEY 372 (474)
T ss_pred chHhHHhCCCCCEEE--ecchhhCC--CceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHH
Confidence 1112233468765 79999864 34566788999988775311 112233 245555555555555432 2334
Q ss_pred HHHHHHHHHHHHHh
Q 009167 413 QNSTALRMAKILEA 426 (541)
Q Consensus 413 ~~~~a~~la~~L~~ 426 (541)
..+..+++.+.|++
T Consensus 373 ~~~~g~~l~~~L~~ 386 (474)
T PLN02482 373 LDKITKKLIQGILE 386 (474)
T ss_pred HHHHHHHHHHHHHH
Confidence 44445555555543
No 332
>PLN02263 serine decarboxylase
Probab=99.47 E-value=4.9e-11 Score=127.96 Aligned_cols=230 Identities=16% Similarity=0.129 Sum_probs=156.5
Q ss_pred CCCccCCCC---chhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhhc
Q 009167 200 ASFEYGRYG---NPTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL 270 (541)
Q Consensus 200 ~~~~Y~R~~---~p~~~~Le~~LA~l~g~e----~~i~~sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~~~l 270 (541)
..+.++-|. ...-.++-+.+++++|.+ ..+++++|++++..++.+-- .+...|++++..|.+... .+
T Consensus 120 dp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~K----Aa 195 (470)
T PLN02263 120 DPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK----AA 195 (470)
T ss_pred CccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHH----HH
Confidence 345555442 233445667788888863 26889999999988877542 233478889999988653 44
Q ss_pred ccCCeEEEEeCC-----CCHHHHHHhccCCC--ceEEEEeCCCCCCCccccHHHHHHHHHhCCC-----EEEEeCCCCCC
Q 009167 271 PKMGITATVIDP-----ADMEGLEAALNNNN--VSLFFTESPTNPFLRCVDVKLVSDLCHKKGA-----IVCIDGTFATP 338 (541)
Q Consensus 271 ~~~Gi~v~~vd~-----~d~e~Le~al~~~~--tklV~lesP~NPtG~i~dl~~Ia~la~~~gi-----~lIvDea~a~~ 338 (541)
..+|++++.++. .|+++|+++|.++. +-+|+....+-++|.+-|+++|+++|+++|+ +++||++|+..
T Consensus 196 ~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~ 275 (470)
T PLN02263 196 RMYRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGL 275 (470)
T ss_pred HhcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhh
Confidence 445667766653 38999999887542 4566677788899999999999999999997 99999998764
Q ss_pred Cc---cc--c--cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH---Hh-----hhcCCCc--hHHHHHHHHH
Q 009167 339 LN---QK--A--LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---LH-----HVLGGAL--NPNAAYLIIR 401 (541)
Q Consensus 339 ~~---~~--~--~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~---~~-----~~~G~~~--s~~~a~l~l~ 401 (541)
+. .. . ...++|-+..+.||+++.+- ..|+++.+++..+.+.. +. ...|... .+...|..++
T Consensus 276 ~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~--~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~ 353 (470)
T PLN02263 276 MMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPM--PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLN 353 (470)
T ss_pred HhhhcccccccCCCcCccEEEECCccccCCCc--CEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHH
Confidence 32 11 1 11248999999999988664 36777776655433321 11 1122222 2455666554
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCC
Q 009167 402 --GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (541)
Q Consensus 402 --~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P 436 (541)
|.+.+..++++..++++++.+.|++.+ +..+.-|
T Consensus 354 ~~G~~G~~~~i~~~~~~A~~l~~~l~~~g-~~~~~~p 389 (470)
T PLN02263 354 RKGYRGFQKEVQKCLRNAHYLKDRLREAG-ISAMLNE 389 (470)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeCC
Confidence 456678888899999999999998873 3334333
No 333
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.46 E-value=1.2e-11 Score=134.36 Aligned_cols=241 Identities=13% Similarity=0.143 Sum_probs=143.1
Q ss_pred CCCchhHHHHHHHHHHHhCC-------CcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHHHHhhc
Q 009167 206 RYGNPTTVVVEEKMSALEGA-------ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVL 270 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~-------e~~i~~sSGs~Ai~~al~all~-------p-Gd~Vlv~~~~y~~~~~~~~~~l 270 (541)
.+.++...+|.++|+++... +.+++++||++|+..+++.... + ..+||.....|++........-
T Consensus 103 ~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~ 182 (472)
T PRK08742 103 GFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVG 182 (472)
T ss_pred ccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhcc
Confidence 35677788999999998742 4678889999999999875321 2 3578999998988431111110
Q ss_pred ---------ccCCeEEEEeCCC-----------------CHHHHHHhcc--CCCceEEEEeC-CCCCCCcccc----HHH
Q 009167 271 ---------PKMGITATVIDPA-----------------DMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKL 317 (541)
Q Consensus 271 ---------~~~Gi~v~~vd~~-----------------d~e~Le~al~--~~~tklV~les-P~NPtG~i~d----l~~ 317 (541)
...-..+.+++.. +++.+++.+. .+++.+|++|. ..+..|.+.+ +++
T Consensus 183 ~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~ 262 (472)
T PRK08742 183 DIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRR 262 (472)
T ss_pred CCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHH
Confidence 0000012222211 2456666664 23589999998 5666777655 779
Q ss_pred HHHHHHhCCCEEEEeCCCCC----C--CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH----hhhc
Q 009167 318 VSDLCHKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVL 387 (541)
Q Consensus 318 Ia~la~~~gi~lIvDea~a~----~--~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~----~~~~ 387 (541)
|.++|++||+++|.||++.. + +.........|+++ +.|.++|+- ...|.+++++++.+.+... ....
T Consensus 263 lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~--~gKgl~gG~-~Plaav~~~~ei~~~~~~~~~~~~~~h 339 (472)
T PRK08742 263 ARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLC--LSKGLTGGF-LPLSAVLATQQLYDAFLDDSRERAFLH 339 (472)
T ss_pred HHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEE--EcccccCCC-CCcceeeccHHHHHHhhccCccCccCc
Confidence 99999999999999999542 1 11223344578888 689998642 2357777888887766421 0112
Q ss_pred CCC--chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCC-CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 388 GGA--LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHP-KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 388 G~~--~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p-~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
+.+ -+|..+..++..++.+.. +...+++.++.+.|++.- .+. .+|. ..+.+|.|.|+.|++.
T Consensus 340 ~~T~~gnpl~~Aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~~~~~~--~~~~----------i~dvRG~Gl~~giel~ 404 (472)
T PRK08742 340 SHSYTGNPLACAAALATLDIFAD--DDVIARNQPTAARMTQLAAQIG--EHPH----------VADVRQAGMVVAFELT 404 (472)
T ss_pred CCCCCccHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHh--cCCC----------eeeEeccceEEEEEec
Confidence 322 256666666666655432 122233333333332210 000 0121 1223678899999995
No 334
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.46 E-value=1.8e-11 Score=139.36 Aligned_cols=148 Identities=16% Similarity=0.226 Sum_probs=113.7
Q ss_pred hHHHHHHHHHHHhCCCcEEEeC-CHHHHHHHHHHHhc----c---C-CCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALEGAESTVIMA-SGMSASTVMLLALV----P---A-GGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e~~i~~s-SGs~Ai~~al~all----~---p-Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+|++.|+++.|.+.+-+.. +|+.+..++++++- . + .++|+++...|+..... +...|++++.++
T Consensus 544 ~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas----a~~~GieVv~Vp 619 (954)
T PRK12566 544 MIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS----AQMAGMRVVIVE 619 (954)
T ss_pred HHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH----HHHCCCEEEEec
Confidence 4568899999999998776665 77766656665542 1 2 35788999889775422 344688888886
Q ss_pred CC-----CHHHHHHhccC--CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCC-CC-cccccccCCcEEE
Q 009167 282 PA-----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-PL-NQKALSLGADLVL 352 (541)
Q Consensus 282 ~~-----d~e~Le~al~~--~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~-~~-~~~~~~~gaDivv 352 (541)
.+ |+++|++++++ .++.+|.+.+|++-.+...|+++|+++||++|+++++|.+... .. ...|.++|+|+++
T Consensus 620 ~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~ 699 (954)
T PRK12566 620 CDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSH 699 (954)
T ss_pred cCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEE
Confidence 53 89999999872 2588888988887766667799999999999999999999753 22 3446789999999
Q ss_pred ECCccccCCC
Q 009167 353 HSATKFIGGH 362 (541)
Q Consensus 353 ~S~sK~lgg~ 362 (541)
.++||+|+++
T Consensus 700 ~s~HKtf~~P 709 (954)
T PRK12566 700 MNLHKTFCIP 709 (954)
T ss_pred ecCCcccCcC
Confidence 9999998743
No 335
>PRK07036 hypothetical protein; Provisional
Probab=99.45 E-value=4.4e-11 Score=129.97 Aligned_cols=239 Identities=13% Similarity=0.165 Sum_probs=145.6
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc------c-C-CCEEEEcCCCCcchHHHHHhhccc----
Q 009167 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV------P-A-GGHIVTTTDCYRKTRIFIETVLPK---- 272 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all------~-p-Gd~Vlv~~~~y~~~~~~~~~~l~~---- 272 (541)
+.++...+|.++|+++... +.+.+++||++|+..+++... . + ..+|+.....|++........-..
T Consensus 92 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~ 171 (466)
T PRK07036 92 MTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADR 171 (466)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCccc
Confidence 5677888999999998753 567888999999999987431 1 2 257888888888843211111000
Q ss_pred --CC---eEEEEeCCCC-----------------HHHHHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHHHHHH
Q 009167 273 --MG---ITATVIDPAD-----------------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 273 --~G---i~v~~vd~~d-----------------~e~Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia~la~ 323 (541)
++ ..+..++..+ ++.+++.+. .+++.+|++|......|.+.| +++|.++|+
T Consensus 172 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~ 251 (466)
T PRK07036 172 TEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICR 251 (466)
T ss_pred ccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHH
Confidence 00 1122222111 234455553 235899999999888888877 889999999
Q ss_pred hCCCEEEEeCCCCCC-C-----ccc-ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH---h--hhcCC--
Q 009167 324 KKGAIVCIDGTFATP-L-----NQK-ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---H--HVLGG-- 389 (541)
Q Consensus 324 ~~gi~lIvDea~a~~-~-----~~~-~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~---~--~~~G~-- 389 (541)
+||+++|+||++... - ... .....+||++ ++|.++++ -+..|.+++++++.+.+... . ...+.
T Consensus 252 ~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt--~gK~l~gG-~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 328 (466)
T PRK07036 252 RYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIIT--FAKGLTSG-YQPLGAVIISERLLDVISGPNAKGNVFTHGFTY 328 (466)
T ss_pred HcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEE--EccccccC-ccccEEEEEcHHHHHHHhcccCcCcccccCCCC
Confidence 999999999996321 1 111 2334578887 78999864 12357777888888876531 0 11221
Q ss_pred CchHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
.-+|..+..++..++.+.. ..++..+..+++.+.|+.. . .+|.. ...+|.|.|+.+++.
T Consensus 329 ~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l---~--~~~~v----------~~vrG~Gl~~~ve~~ 389 (466)
T PRK07036 329 SGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL---R--ELPLV----------GDVRGDHLMACVECV 389 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh---c--cCCCE----------EEEEeeceEEEEEEc
Confidence 2356777776666666532 2233333444444444321 1 12211 224678999999995
No 336
>PRK06149 hypothetical protein; Provisional
Probab=99.45 E-value=9.3e-11 Score=137.91 Aligned_cols=288 Identities=14% Similarity=0.144 Sum_probs=175.6
Q ss_pred cCCCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhh-c--------
Q 009167 204 YGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV-L-------- 270 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g--~e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~-l-------- 270 (541)
.+|+.++...+|.++|+++.. .+.+++++||++|+..+++.. ......||..+..|+|........ .
T Consensus 618 ~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~ 697 (972)
T PRK06149 618 NSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQA 697 (972)
T ss_pred cccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccc
Confidence 356677888999999999984 467899999999999999732 223457888888888732111000 0
Q ss_pred -cc--CCeEEEEeC--------CCC-----HHHHHHhcc-----CCCceEEEEeCCCCCCCcccc----HHHHHHHHHhC
Q 009167 271 -PK--MGITATVID--------PAD-----MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (541)
Q Consensus 271 -~~--~Gi~v~~vd--------~~d-----~e~Le~al~-----~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~ 325 (541)
.. .++.....+ ..+ .+++++.++ .+++.+|++|......|.+.+ +++|.++|++|
T Consensus 698 ~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~ 777 (972)
T PRK06149 698 LETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR 777 (972)
T ss_pred cCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc
Confidence 00 011111000 011 233333332 235889999999888888888 99999999999
Q ss_pred CCEEEEeCCCC-CCCcc------cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcC-CCchHHHHH
Q 009167 326 GAIVCIDGTFA-TPLNQ------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNAAY 397 (541)
Q Consensus 326 gi~lIvDea~a-~~~~~------~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G-~~~s~~~a~ 397 (541)
|+++|+||++. .+-.. .......||++ ++|.+|++ ...|++++++++.+.+......++ ...+|..+.
T Consensus 778 g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt--~gK~lg~G--~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~a 853 (972)
T PRK06149 778 GGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIIT--MAKGMGNG--HPLGAVITRREIAEALEAEGYFFSSTGGSPVSCR 853 (972)
T ss_pred CCEEEEEeehhcCCccCccchhhhhcCCCCCEEE--ecccccCC--eeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHH
Confidence 99999999963 22111 11233578885 89999864 457888899998887753111111 234677777
Q ss_pred HHHHhHHHHHHHHHHHHHHH----HHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-----
Q 009167 398 LIIRGMKTLHLRVQQQNSTA----LRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----- 464 (541)
Q Consensus 398 l~l~~l~tl~~r~~~~~~~a----~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~----- 464 (541)
.++..|+.+.. ++..+++ +++.+.|++ +|.+. ..+|.|.|+.+++..
T Consensus 854 aala~L~~i~~--e~l~~~~~~~G~~l~~~L~~l~~~~~~i~------------------~vrG~Gl~~gvel~~~~~~~ 913 (972)
T PRK06149 854 IGMAVLDVLRE--EKLQENARRVGDHLKARLEALADRHPLIG------------------AVHGMGLYLGVELVRDRQTL 913 (972)
T ss_pred HHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeE------------------EEeecceEEEEEEecCcccC
Confidence 77767766542 1233444 344444432 22222 336788999999842
Q ss_pred --CHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHH
Q 009167 465 --DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADVLQAL 538 (541)
Q Consensus 465 --~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlS----vG~e~~edli~dL~~AL 538 (541)
..+....+.+.+...|+-+...+ ...+.|||. +..++.+.+++.|+++|
T Consensus 914 ~~~~~~~~~i~~~l~~~Gvl~~~~g-------------------------~~~~vl~~~Ppl~it~~~id~~~~~l~~~l 968 (972)
T PRK06149 914 EPATEETAAICDRLLELGVIMQPTG-------------------------DHLNILKIKPPLCLDRESADFFVDMLDRVL 968 (972)
T ss_pred CCChHHHHHHHHHHHhCCeEEeecC-------------------------CCCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 12345667777665565443211 123456654 34466777777777777
Q ss_pred hh
Q 009167 539 HA 540 (541)
Q Consensus 539 ~~ 540 (541)
.+
T Consensus 969 ~~ 970 (972)
T PRK06149 969 TE 970 (972)
T ss_pred Hh
Confidence 54
No 337
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.44 E-value=3.7e-11 Score=129.31 Aligned_cols=215 Identities=12% Similarity=0.158 Sum_probs=138.5
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHH-HHh-hc---------c
Q 009167 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIF-IET-VL---------P 271 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~-~~~-~l---------~ 271 (541)
+.++...+|.++|.++.+. +.+.+++||++|+..+++... ....+|+.....|+|.... +.. .+ .
T Consensus 90 ~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~ 169 (433)
T PRK00615 90 LTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTH 169 (433)
T ss_pred CCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCC
Confidence 4577788899999988864 478888999999999987432 2235788888888883211 100 00 0
Q ss_pred cC-----CeEEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC-C
Q 009167 272 KM-----GITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-L 339 (541)
Q Consensus 272 ~~-----Gi~v~~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~-~ 339 (541)
.. ......++.+|++++++.+.. +++.+|++|......|.+.| +++|.++|++||+++|+||++... .
T Consensus 170 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~ 249 (433)
T PRK00615 170 LVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRV 249 (433)
T ss_pred CCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccc
Confidence 00 011122345688888888742 24789999999888888887 459999999999999999997321 1
Q ss_pred c----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-hcCCC--chHHHHHHHHHhHHHHHH--HH
Q 009167 340 N----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGA--LNPNAAYLIIRGMKTLHL--RV 410 (541)
Q Consensus 340 ~----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G~~--~s~~~a~l~l~~l~tl~~--r~ 410 (541)
. ........|+++ ++|.++++ ..+|++++++++++.+..... ..+.+ .+|..+..++..++.+.. ..
T Consensus 250 G~~ga~~~~gv~PDi~~--~gK~lggG--~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~ 325 (433)
T PRK00615 250 AQGGAAAIYHVKPDITV--YGKILGGG--LPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFY 325 (433)
T ss_pred cHhHHHHhcCCCCCeEE--EcccccCC--cceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHH
Confidence 1 112233568876 89999854 357889999999887753211 12222 356666666666665532 23
Q ss_pred HHHHHHHHHHHHHHH
Q 009167 411 QQQNSTALRMAKILE 425 (541)
Q Consensus 411 ~~~~~~a~~la~~L~ 425 (541)
++..++.+++.+.|+
T Consensus 326 ~~~~~~g~~l~~~l~ 340 (433)
T PRK00615 326 TQLSTLEQNFLSPIE 340 (433)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333344444444444
No 338
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.44 E-value=2.6e-11 Score=131.57 Aligned_cols=239 Identities=15% Similarity=0.141 Sum_probs=146.1
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc-------cC-CCEEEEcCCCCcchHHHHHhhcc-----
Q 009167 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PA-GGHIVTTTDCYRKTRIFIETVLP----- 271 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all-------~p-Gd~Vlv~~~~y~~~~~~~~~~l~----- 271 (541)
+.++...+|.++|+++.+. +.+++++||++|+..+++... .+ ..+||.....|++.....-.+-.
T Consensus 96 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~ 175 (460)
T PRK06916 96 LANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFH 175 (460)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccc
Confidence 4577788999999998754 578888999999999987432 13 36889989999884321111100
Q ss_pred -cCC---eEEEEeCC-----------------CCHHHHHHhcc--CCCceEEEEeC-CCCCCCcccc----HHHHHHHHH
Q 009167 272 -KMG---ITATVIDP-----------------ADMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 272 -~~G---i~v~~vd~-----------------~d~e~Le~al~--~~~tklV~les-P~NPtG~i~d----l~~Ia~la~ 323 (541)
.++ ..+..++. .+++.+++.++ .+++.+|++|. +....|.+.+ +++|.++|+
T Consensus 176 ~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~ 255 (460)
T PRK06916 176 QVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCT 255 (460)
T ss_pred cccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHH
Confidence 000 01111211 12456677664 23589999998 5777777654 779999999
Q ss_pred hCCCEEEEeCCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-----hhhcCCC--
Q 009167 324 KKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGGA-- 390 (541)
Q Consensus 324 ~~gi~lIvDea~a~~-~-----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-----~~~~G~~-- 390 (541)
++|+++|+||++... - .........|+++ +.|.++|+- +..|++++++++.+.+... ....+.+
T Consensus 256 ~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~--~gK~l~gG~-~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~ 332 (460)
T PRK06916 256 KYNVLFITDEVATGFGRTGKMFACEHENVTPDIMT--AGKGLTGGY-LPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYT 332 (460)
T ss_pred HcCCEEEeechhhCCCcCchhhHHHhcCCCCCeee--eehhhhcCc-cccceeeecHHHHHHhhccccccCccccCCCCC
Confidence 999999999995321 1 1222334578887 789998642 2467788888887766421 0112222
Q ss_pred chHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 391 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
-+|..+..++..++.+.. ..++..+..+++.+.|++.. + +|.+ .+.+|.|.|+.+++.
T Consensus 333 gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~---~--~~~v----------~~vrG~Glm~giel~ 392 (460)
T PRK06916 333 GNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLF---A--LKHV----------GDIRQLGLMVGIELV 392 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhh---c--CCCe----------EEeecCCceeeEEee
Confidence 256666666666665532 22333344445555554321 1 2211 124678899999985
No 339
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.44 E-value=6.4e-12 Score=131.16 Aligned_cols=237 Identities=16% Similarity=0.209 Sum_probs=151.0
Q ss_pred CCCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcchHH-HH-------
Q 009167 205 GRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRI-FI------- 266 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g--~e~~i~~sSGs~Ai~~al~all--------~pGd~Vlv~~~~y~~~~~-~~------- 266 (541)
..+.++...+|.++|.++.+ .+.+++++||++|+..+++... ....+|+.....|++... .+
T Consensus 54 ~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~ 133 (339)
T PF00202_consen 54 SGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPP 133 (339)
T ss_dssp TTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTH
T ss_pred cceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcc
Confidence 66778889999999999994 4678889999999999997544 234689999999987321 11
Q ss_pred -HhhcccCCeEEEEeCCCCHHH----------HHHh---ccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCE
Q 009167 267 -ETVLPKMGITATVIDPADMEG----------LEAA---LNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (541)
Q Consensus 267 -~~~l~~~Gi~v~~vd~~d~e~----------Le~a---l~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~ 328 (541)
+.........+..++..++.. +++. ...+++.+|++|......|...+ +++|.++|++||++
T Consensus 134 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gil 213 (339)
T PF00202_consen 134 YRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGIL 213 (339)
T ss_dssp HHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-E
T ss_pred ccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccc
Confidence 111222222345566666544 2222 22335899999998877776654 78999999999999
Q ss_pred EEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHh
Q 009167 329 VCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (541)
Q Consensus 329 lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~ 402 (541)
+|+||++... +........+|+++ ++|.++++ ...|.+++++++.+.+..........-+|..+..++..
T Consensus 214 lI~DEV~tG~gRtG~~~a~~~~gv~PDiv~--~gK~l~gG--~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~ 289 (339)
T PF00202_consen 214 LIADEVQTGFGRTGKFFASEHYGVDPDIVT--FGKGLGGG--LPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALAT 289 (339)
T ss_dssp EEEEETTTTTTTTSSSSGHHHHTSSSSEEE--EEGGGGTT--SSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHH
T ss_pred eecccccccccccCCccceecccccCcccc--cccchhhh--hhcccccccchhhccccccccccccccchHhhhhhhhH
Confidence 9999996532 22334456689998 56999876 56788888888877653322111112346666666666
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 403 MKTLHLR--VQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 403 l~tl~~r--~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
++.+... .++..+...++.+.|++ ++.+..| +|.|.|+.+++.
T Consensus 290 l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rg~Gl~~~ie~~ 338 (339)
T PF00202_consen 290 LEILEEEDLLERVRELGERLREGLRELAARYPLIGEV------------------RGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEE------------------EEETTEEEEEES
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------eeeCeEEEEEEE
Confidence 6654432 23333333444444432 2444333 567889999985
No 340
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.43 E-value=4.2e-11 Score=130.11 Aligned_cols=240 Identities=13% Similarity=0.168 Sum_probs=146.0
Q ss_pred CCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhc-------cC-CCEEEEcCCCCcchHHHHHhhcc----
Q 009167 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV-------PA-GGHIVTTTDCYRKTRIFIETVLP---- 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g--~e~~i~~sSGs~Ai~~al~all-------~p-Gd~Vlv~~~~y~~~~~~~~~~l~---- 271 (541)
.+.++...+|.++|+++.+ .+.+++++||++|+..+++... ++ ..+||.....|++.......+-.
T Consensus 86 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 165 (466)
T PRK07030 86 GFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALF 165 (466)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccc
Confidence 4567888899999999875 3578888999999999987541 12 35788888888884211111000
Q ss_pred --cCC---eEEEEeCCC-----------------CHHHHHHhcc--CCCceEEEEeC-CCCCCCcccc----HHHHHHHH
Q 009167 272 --KMG---ITATVIDPA-----------------DMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 272 --~~G---i~v~~vd~~-----------------d~e~Le~al~--~~~tklV~les-P~NPtG~i~d----l~~Ia~la 322 (541)
.++ ..+..++.. +++.+++.+. .+++.+|++|. +....|.+.+ +++|.++|
T Consensus 166 ~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc 245 (466)
T PRK07030 166 TETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREAC 245 (466)
T ss_pred cccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHH
Confidence 000 011222211 2456677774 23589999998 5666677665 77999999
Q ss_pred HhCCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-----hhhcCCC-
Q 009167 323 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGGA- 390 (541)
Q Consensus 323 ~~~gi~lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-----~~~~G~~- 390 (541)
++||+++|+||++... +.........|+++ +.|.++|+ -...|.+++++++.+.+... ....+.+
T Consensus 246 ~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG-~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~ 322 (466)
T PRK07030 246 DRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLC--LSKALTGG-YLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSY 322 (466)
T ss_pred HHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEe--eehhccCC-cccceEEEecHHHHHHHhcccccccccccCCCC
Confidence 9999999999995321 11233344578988 68999864 12467788888888776421 0112222
Q ss_pred -chHHHHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 391 -LNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 391 -~s~~~a~l~l~~l~tl~~r--~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
-+|..+.+++..|+.+... .++..+.-+++.+.|++. . .+|.+ .+.+|.|.|+.+++.
T Consensus 323 ~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l---~--~~~~v----------~~vrG~Gl~~gie~~ 383 (466)
T PRK07030 323 TGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHL---A--DHPHV----------AEVRQTGMILAIEMV 383 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH---h--cCCCE----------EEeEeceeEEEEEec
Confidence 3577777666666655321 222223333444444331 0 12211 223678899999985
No 341
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.43 E-value=2e-11 Score=131.66 Aligned_cols=229 Identities=21% Similarity=0.194 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHhCC-C--cEEEeCCHHHHHHHHHHHh---cc--C---CC------EEEEcCCCCcchHHHHHhhcccCC
Q 009167 212 TVVVEEKMSALEGA-E--STVIMASGMSASTVMLLAL---VP--A---GG------HIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 212 ~~~Le~~LA~l~g~-e--~~i~~sSGs~Ai~~al~al---l~--p---Gd------~Vlv~~~~y~~~~~~~~~~l~~~G 274 (541)
-+++-..++++++. + ...++++|++|+.+++.+. .. . +. +|+++...|.+.... +..+|
T Consensus 103 E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Ka----a~~lG 178 (460)
T COG0076 103 EERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKA----ARYLG 178 (460)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHH----HHHhC
Confidence 33445566677777 3 4688889999998877643 11 1 11 699999899886543 34445
Q ss_pred eEEEEeC--C----CCHHHHHHhccCCCceE--EEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc--ccc-
Q 009167 275 ITATVID--P----ADMEGLEAALNNNNVSL--FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKA- 343 (541)
Q Consensus 275 i~v~~vd--~----~d~e~Le~al~~~~tkl--V~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~--~~~- 343 (541)
++++.++ . .|+++++++++++ +.. |+....+-++|.+-|+++|+++|+++++++|||.+++.++. .++
T Consensus 179 ~~~~~v~~~~~~~~id~~~l~~~i~~~-t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~ 257 (460)
T COG0076 179 LGLRRVPTVPTDYRIDVDALEEAIDEN-TIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPD 257 (460)
T ss_pred CCceeEEeccCccccCHHHHHHHHHhh-ccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCcc
Confidence 5544443 2 3899999999885 554 77778889999999999999999999999999999886542 111
Q ss_pred ----cc-cCCcEEEECCccccCCCCCceEEEEEeChH--HHHHHHHHhhhcC-----------CCc--hHHHHHHHHHhH
Q 009167 344 ----LS-LGADLVLHSATKFIGGHNDVLAGSISGSGK--LVTQIRNLHHVLG-----------GAL--NPNAAYLIIRGM 403 (541)
Q Consensus 344 ----~~-~gaDivv~S~sK~lgg~gd~~gG~lv~~~~--li~~l~~~~~~~G-----------~~~--s~~~a~l~l~~l 403 (541)
.. .++|-++.++||++..+- .+|+++.+++ +.+.+.......+ ... ....+|..++.+
T Consensus 258 ~~~~f~l~~vdSIt~d~HK~g~aP~--~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~l 335 (460)
T COG0076 258 GRWDFGLEGVDSITVDGHKYGLAPI--GCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRL 335 (460)
T ss_pred chhhcCCCCceEEEECcccccCCCC--CceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHh
Confidence 11 268999999999876543 2566665443 3333321111111 111 224455554443
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC
Q 009167 404 --KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 404 --~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~ 464 (541)
+-+...+++..++++++++.|++.+..+-+.-|. .++++|.+++
T Consensus 336 G~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~-----------------l~~V~fr~~~ 381 (460)
T COG0076 336 GREGYRKLLDRTLELARYLAEELEKLGDFELVNEPE-----------------LPIVAFRLKD 381 (460)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCc-----------------cceEEEEcCC
Confidence 4556667778899999999999876555555453 4589999864
No 342
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.43 E-value=2.2e-11 Score=120.03 Aligned_cols=295 Identities=16% Similarity=0.150 Sum_probs=161.9
Q ss_pred hhHHHHHHHHHHHhCC---CcEEEeCCHH-HHHHHHHHHhc---cCCC--EEEEc-CCCCcchHHHH--HhhcccCCeEE
Q 009167 210 PTTVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALV---PAGG--HIVTT-TDCYRKTRIFI--ETVLPKMGITA 277 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~---e~~i~~sSGs-~Ai~~al~all---~pGd--~Vlv~-~~~y~~~~~~~--~~~l~~~Gi~v 277 (541)
+..+.|.+.+.+.+|. +..|..|+|+ .+...++..+. ..|+ .|+.+ .|+|-+.-... ...+-.+.-++
T Consensus 78 ~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~i 157 (417)
T COG3977 78 VLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNI 157 (417)
T ss_pred HHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCc
Confidence 3445555555555665 5789999998 56666655443 2343 35444 46665532110 00111111111
Q ss_pred EEeC------CCCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc------c
Q 009167 278 TVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ------K 342 (541)
Q Consensus 278 ~~vd------~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~------~ 342 (541)
+.++ ..|.++|. +.+ .+.+|++.-|+||||.+.. +.+|.++|++||+++++|++|+.+++. .
T Consensus 158 el~~~g~FKY~vDF~~l~--i~e-~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~ 234 (417)
T COG3977 158 ELLPAGQFKYHVDFEHLH--IGE-STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDAT 234 (417)
T ss_pred ccccccceeeccCHHHcc--ccc-ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccccc
Confidence 1111 12556554 334 4899999999999999985 456777899999999999999987652 1
Q ss_pred ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcC---CCchHHHHH-HHHHh-HHHHHHHH-HHHHHH
Q 009167 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG---GALNPNAAY-LIIRG-MKTLHLRV-QQQNST 416 (541)
Q Consensus 343 ~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G---~~~s~~~a~-l~l~~-l~tl~~r~-~~~~~~ 416 (541)
++-...-+.|.|+||.--++ .+.|++++++++++.+..+..... +.+++..+. ++.++ +..+.+.+ +-...+
T Consensus 235 ~~w~~NiilC~SLSK~GLPG--~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~ 312 (417)
T COG3977 235 PLWNENIILCMSLSKLGLPG--SRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRN 312 (417)
T ss_pred ccCCCCEEEEeehhhcCCCC--cceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHH
Confidence 22223457899999964333 468999999999998876554322 233333222 22111 11221111 111111
Q ss_pred -HHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhccCcccE-EEEEEcCCHHHHHHHHHHccCcCeecccCCcccccc
Q 009167 417 -ALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGV-VSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVD 493 (541)
Q Consensus 417 -a~~la~~L~~-~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~-vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~ 493 (541)
++...+.|++ .|..+...| ++.|.+ +|+-+++-+.....+.++|+..|+-+-.|..+-.-.
T Consensus 313 ~~q~~~~~l~~~lp~~~~~iH----------------kpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl 376 (417)
T COG3977 313 RVQTTIAILRRYLPEYRCLIH----------------KPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGL 376 (417)
T ss_pred HHHHHHHHHHHhcCccceeee----------------cCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCC
Confidence 2222233332 232222222 123444 355555434566788899998888888887653211
Q ss_pred cCccccccCCCHHHHHhcCCCCCeEEEEecCCC--HHHHHHHHHHHHh
Q 009167 494 QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED--FEDLKADVLQALH 539 (541)
Q Consensus 494 ~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~--~edli~dL~~AL~ 539 (541)
- .++.-...++|+|+-.++ .+.-+..|.+.++
T Consensus 377 ----~----------~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~ve 410 (417)
T COG3977 377 ----D----------KEWPHTHQCMRMNYVPEPEKIEKGVAILAEEVE 410 (417)
T ss_pred ----C----------CCCCCccceEEEecCCCHHHHHHHHHHHHHHHH
Confidence 0 112223579999987654 3444455544443
No 343
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.42 E-value=5.9e-11 Score=127.88 Aligned_cols=288 Identities=12% Similarity=0.122 Sum_probs=166.1
Q ss_pred CCCchhHHHHHHHHHHHh---CCCcEEEeCCHHHHHHHHHHHhcc--------C------CCEEEEcCCCCcchHHHHHh
Q 009167 206 RYGNPTTVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVP--------A------GGHIVTTTDCYRKTRIFIET 268 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~---g~e~~i~~sSGs~Ai~~al~all~--------p------Gd~Vlv~~~~y~~~~~~~~~ 268 (541)
.+.++...++-++|+++. +.+.+++++||++|+..+++.... . +.+||.....|+|.......
T Consensus 81 ~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als 160 (431)
T TIGR03251 81 DVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLS 160 (431)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhh
Confidence 445667777888888875 235688889999999999874420 1 36899999999884322111
Q ss_pred hcc------cCC-------eEEEEe--C-------------CCCHHHHHHhcc--CCCceEEEEeCCCCCCCcccc----
Q 009167 269 VLP------KMG-------ITATVI--D-------------PADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---- 314 (541)
Q Consensus 269 ~l~------~~G-------i~v~~v--d-------------~~d~e~Le~al~--~~~tklV~lesP~NPtG~i~d---- 314 (541)
.-. .+. +...+. + ..+++++++.+. .+++.+|++|......|.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~ 240 (431)
T TIGR03251 161 LTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEF 240 (431)
T ss_pred ccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHH
Confidence 100 000 000000 0 012445555553 235899999999888887763
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeCh--HHHHHHHHHhhh
Q 009167 315 VKLVSDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRNLHHV 386 (541)
Q Consensus 315 l~~Ia~la~~~gi~lIvDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~--~li~~l~~~~~~ 386 (541)
+++|.++|++||+++|+||++... .. .......+|+++ ++|.+. ++|++.+++ ++..........
T Consensus 241 l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~--~gK~~~-----~~g~~~~~~i~~~~~~~~~~~~~ 313 (431)
T TIGR03251 241 LRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA--FGKKTQ-----VCGIMAGRRVDEVADNVFAVPSR 313 (431)
T ss_pred HHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEE--ecccCc-----cceEEecchHHHhhhhcccCccc
Confidence 889999999999999999996521 11 122344578887 678762 356776543 222111110001
Q ss_pred cCCC--chHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEE
Q 009167 387 LGGA--LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 462 (541)
Q Consensus 387 ~G~~--~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l 462 (541)
.+.+ .+|..+.+++..++.+.. ..++..+..+++.+.|++.- . .+|.+. ...+|.|.|+.+++
T Consensus 314 ~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~--~--~~~~~i---------~~vrg~G~~~~i~~ 380 (431)
T TIGR03251 314 LNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELA--A--EFPHLV---------SNPRGRGLMCAFDL 380 (431)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH--H--hCccce---------ecccccceeEEEEe
Confidence 1222 345555555555555422 12233334444444443310 0 112111 11245788999999
Q ss_pred cCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 463 DGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 463 ~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+. ......+...|...|+-+... ..+.|||+..+..+++.++.+.++|+++
T Consensus 381 ~~-~~~~~~~~~~l~~~Gvl~~~~---------------------------g~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 381 PS-TADRDEVIRQLYREGVLLLGC---------------------------GERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred CC-HHHHHHHHHHHHhCCeEEecC---------------------------CCCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 64 344556776666555433211 1256999999988888888888888753
No 344
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.41 E-value=1.9e-10 Score=124.78 Aligned_cols=233 Identities=13% Similarity=0.113 Sum_probs=138.6
Q ss_pred CCCchhHHHHHHHHHHHhCCC----cEEEe-CCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhc--------
Q 009167 206 RYGNPTTVVVEEKMSALEGAE----STVIM-ASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL-------- 270 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e----~~i~~-sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l-------- 270 (541)
.+.++...+|.++|+++.+.. ..+++ +||++|+..+++.. ....++||.....|++.....-..-
T Consensus 97 ~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~ 176 (459)
T PRK06931 97 DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNA 176 (459)
T ss_pred ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccC
Confidence 356788889999999987532 24455 79999999998743 2334678888888988542221110
Q ss_pred -ccCCeEEEEeCCC-------------CHHHH----HHhcc-----CCCceEEEEeCCCCCCCcccc----HHHHHHHHH
Q 009167 271 -PKMGITATVIDPA-------------DMEGL----EAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 271 -~~~Gi~v~~vd~~-------------d~e~L----e~al~-----~~~tklV~lesP~NPtG~i~d----l~~Ia~la~ 323 (541)
......+.+++.. +.+.+ ++.+. ..++.+|++|......|.+.+ +++|.++|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~ 256 (459)
T PRK06931 177 VNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQ 256 (459)
T ss_pred CCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 0001122333321 12222 33332 124889999998877787665 889999999
Q ss_pred hCCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCC--chHHH
Q 009167 324 KKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNA 395 (541)
Q Consensus 324 ~~gi~lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~--~s~~~ 395 (541)
+||+++|.||++... +.........|+++ ++|.++++ ...|++++++++ +.+... .++.+ -+|..
T Consensus 257 ~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt--~gK~l~gG--~Pi~av~~~~~~-~~~~~~--~~~~T~~gnpla 329 (459)
T PRK06931 257 KHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV--MSKAVGGG--LPLAVLGIKKEF-DAWQPG--GHTGTFRGNQLA 329 (459)
T ss_pred HcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE--ecccccCC--cceeeeeeHHHH-hhccCC--CCCCCCCCCHHH
Confidence 999999999995422 11223344578888 78999864 345667766653 444221 12222 35666
Q ss_pred HHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 396 AYLIIRGMKTLHLR--VQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 396 a~l~l~~l~tl~~r--~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
+..++..|+.+... .++..+.-+++.+.|++ +|.+. +.+|.|.|+.+++.
T Consensus 330 ~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~------------------~vrG~Glm~giel~ 385 (459)
T PRK06931 330 MATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIG------------------NVRGRGLMIGIEIV 385 (459)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeE------------------eEecCceEEEEEEc
Confidence 66666666654321 22222333333333332 33322 23678899999995
No 345
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.41 E-value=4.3e-13 Score=137.65 Aligned_cols=165 Identities=24% Similarity=0.343 Sum_probs=47.5
Q ss_pred HHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCC---CcchHHHHHhhcccCCeEEEEeCC---CCHHH
Q 009167 214 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC---YRKTRIFIETVLPKMGITATVIDP---ADMEG 287 (541)
Q Consensus 214 ~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~---y~~~~~~~~~~l~~~Gi~v~~vd~---~d~e~ 287 (541)
.+++.++.+.|+++++++++..+|+.+++.++. +|.+||+++-. +++.++. ...++.-|..++.|-. ..+++
T Consensus 51 ~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRi-p~vm~~sGa~lvEVGttN~t~~~D 128 (367)
T PF03841_consen 51 HVEELLCELTGAEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRI-PDVMRQSGARLVEVGTTNRTHLSD 128 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc-cccccccccccccccccccccccc
Confidence 467788999999999999999999999998876 47788888743 5554432 2445556766655543 35889
Q ss_pred HHHhccCCCceEEEEeCCCCCC--C--ccccHHHHHHHHHhCCCEEEEeCCCCC------------CCcccccccCCcEE
Q 009167 288 LEAALNNNNVSLFFTESPTNPF--L--RCVDVKLVSDLCHKKGAIVCIDGTFAT------------PLNQKALSLGADLV 351 (541)
Q Consensus 288 Le~al~~~~tklV~lesP~NPt--G--~i~dl~~Ia~la~~~gi~lIvDea~a~------------~~~~~~~~~gaDiv 351 (541)
++++|+++ |.+++--+++|.. | .-.+++++++++++|++++++|..-+. +-....+..|+|+|
T Consensus 129 ye~AI~e~-Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV 207 (367)
T PF03841_consen 129 YEKAITEN-TAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLV 207 (367)
T ss_dssp ---------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEE
T ss_pred cccccccc-ccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEE
Confidence 99999984 8888776888873 2 235799999999999999999987421 11234467899999
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHh
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH 384 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~ 384 (541)
++|..|.+||+. +|+++|++++++++++..
T Consensus 208 ~fSGdKlLGGPQ---aGiI~Gkk~lI~~lk~~p 237 (367)
T PF03841_consen 208 TFSGDKLLGGPQ---AGIIVGKKELIEKLKKHP 237 (367)
T ss_dssp EEETTSSSSS-S----EEEEEEHHHHHHHHHHH
T ss_pred EEECCCcCCCCC---eEEEEeCHHHHHHHhhCC
Confidence 999999999986 899999999999998644
No 346
>PRK07483 hypothetical protein; Provisional
Probab=99.40 E-value=5.6e-11 Score=128.41 Aligned_cols=293 Identities=15% Similarity=0.199 Sum_probs=169.8
Q ss_pred CCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHhhc------
Q 009167 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVL------ 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g--~e~~i~~sSGs~Ai~~al~all~-------pG-d~Vlv~~~~y~~~~~~~~~~l------ 270 (541)
+.++...+|.++|+++.+ .+.+.+++||++|+..+++.... +| .+||.....|++........-
T Consensus 70 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~ 149 (443)
T PRK07483 70 FTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRR 149 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccc
Confidence 567888899999999874 36788889999999999874321 33 478888888888421110100
Q ss_pred ccCC---eEEEEeCC----CC--------------HHHHHHhcc---CCCceEEEEeCCCC-CCCcccc----HHHHHHH
Q 009167 271 PKMG---ITATVIDP----AD--------------MEGLEAALN---NNNVSLFFTESPTN-PFLRCVD----VKLVSDL 321 (541)
Q Consensus 271 ~~~G---i~v~~vd~----~d--------------~e~Le~al~---~~~tklV~lesP~N-PtG~i~d----l~~Ia~l 321 (541)
..++ ..+..++. .+ ++++++++. .+++.+|++|.... ..|.+.+ +++|.++
T Consensus 150 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~l 229 (443)
T PRK07483 150 EPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREV 229 (443)
T ss_pred cccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHH
Confidence 0011 11122221 11 256666553 23589999998874 3466655 8899999
Q ss_pred HHhCCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCC--c
Q 009167 322 CHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA--L 391 (541)
Q Consensus 322 a~~~gi~lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~--~ 391 (541)
|++||+++|+||++... +.........|+++ ++|.++++ -...|.+++++++.+.+.... ..++.+ -
T Consensus 230 c~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG-~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~g 306 (443)
T PRK07483 230 CDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVT--IAKGLGAG-YQPIGAVLASDRIYDAIADGSGFFQHGHTYLG 306 (443)
T ss_pred HHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeee--ehhhhccC-ccccEEEEEcHHHHHHHhcCCCccccCCCCCC
Confidence 99999999999995421 11222344578888 78999864 123677778888887765311 012222 2
Q ss_pred hHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC
Q 009167 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD 465 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~ 465 (541)
+|..+.+++..++.+.. ..++..+..+++.+.|++ +|.+. +.+|.|.|+.+++..+
T Consensus 307 npl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vRG~Glm~gie~~~~ 368 (443)
T PRK07483 307 HATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVG------------------DIRGRGLFVGVELVAD 368 (443)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCee------------------eEeecccEEEEEEeec
Confidence 56666666666655432 122233333444444432 22222 2367889999998421
Q ss_pred H----------HHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe----cCCCHHHHH
Q 009167 466 L----------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF----GVEDFEDLK 531 (541)
Q Consensus 466 ~----------~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv----G~e~~edli 531 (541)
. .....+...+...|+-+...+.. . .+...+.|||.. ..++.+..+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~--------~------------~~~~~~~l~~~PpL~it~~eid~~~ 428 (443)
T PRK07483 369 RATKAPFDPALKLHARIKREAMARGLMVYPMGGT--------I------------DGVRGDHVLLAPPFIITAAQIDEIV 428 (443)
T ss_pred ccccCCCCchhhHHHHHHHHHHHCCcEEEecCcc--------c------------cCCCCCEEEEECCCCCCHHHHHHHH
Confidence 1 12345555555445433211000 0 011135677654 446677777
Q ss_pred HHHHHHHhh
Q 009167 532 ADVLQALHA 540 (541)
Q Consensus 532 ~dL~~AL~~ 540 (541)
+.|+++|.+
T Consensus 429 ~~l~~~l~~ 437 (443)
T PRK07483 429 ERLGDAIDA 437 (443)
T ss_pred HHHHHHHHH
Confidence 778777764
No 347
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.40 E-value=4.9e-11 Score=117.60 Aligned_cols=178 Identities=21% Similarity=0.353 Sum_probs=136.9
Q ss_pred CCCccCCCCchhHHHHHHHHHHHhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcCC-CCcchHHHH------Hhh
Q 009167 200 ASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTTD-CYRKTRIFI------ETV 269 (541)
Q Consensus 200 ~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~---~sSGs~Ai~~al~all~pGd~Vlv~~~-~y~~~~~~~------~~~ 269 (541)
.+|.|. +-.++.|++..|+.+|+|.+++ +-||+.||..+|..+++|||+++.-.- -|......+ ...
T Consensus 58 tGYGyd---D~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gS 134 (416)
T COG4100 58 TGYGYD---DLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGS 134 (416)
T ss_pred CCCCcc---ccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCccc
Confidence 445444 4456778999999999987654 569999999999999999999876443 343322222 123
Q ss_pred cccCCeEEEEeCCC-----CHHHHHHhccCCCceEEEEeCCC----CCCCccccHHHHHHHHHhC--CCEEEEeCCCCCC
Q 009167 270 LPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPT----NPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATP 338 (541)
Q Consensus 270 l~~~Gi~v~~vd~~-----d~e~Le~al~~~~tklV~lesP~----NPtG~i~dl~~Ia~la~~~--gi~lIvDea~a~~ 338 (541)
++.+|+.+.-++.. |.+.+..++++ +||+|.+.-.. -|...+.+++++.++.++- ++++.|||+|+.+
T Consensus 135 L~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEF 213 (416)
T COG4100 135 LKDFGIKYKAVPLTADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEF 213 (416)
T ss_pred HHHhCcceeecccccCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhh
Confidence 56678888877753 88999999998 49999985543 4667777888888888874 7999999999988
Q ss_pred Cc-ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHH
Q 009167 339 LN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR 381 (541)
Q Consensus 339 ~~-~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~ 381 (541)
+. ..|...|+|++..|+-|--||.---.||++.++.++++...
T Consensus 214 vE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 214 VEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred hhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhhc
Confidence 74 56778899999999999988765456899999999988653
No 348
>PRK06917 hypothetical protein; Provisional
Probab=99.39 E-value=4.8e-10 Score=121.32 Aligned_cols=294 Identities=13% Similarity=0.148 Sum_probs=170.9
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCCcchHHHHHhhcc----
Q 009167 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTRIFIETVLP---- 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all-------~pG-d~Vlv~~~~y~~~~~~~~~~l~---- 271 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++... .+| .+|+.....|++........-.
T Consensus 70 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~ 149 (447)
T PRK06917 70 QFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLR 149 (447)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccc
Confidence 46678888999999998864 457788999999999998541 133 6788888888884322111100
Q ss_pred --cCC---eEEEEeC----------C-------CCHHHHHHhccC---CCceEEEEeCCCCC-CCcccc----HHHHHHH
Q 009167 272 --KMG---ITATVID----------P-------ADMEGLEAALNN---NNVSLFFTESPTNP-FLRCVD----VKLVSDL 321 (541)
Q Consensus 272 --~~G---i~v~~vd----------~-------~d~e~Le~al~~---~~tklV~lesP~NP-tG~i~d----l~~Ia~l 321 (541)
.++ -.+..++ . .+++.+++.++. +++.+|++|..... .|.+.+ +++|.++
T Consensus 150 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~l 229 (447)
T PRK06917 150 RQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEI 229 (447)
T ss_pred cccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHH
Confidence 000 0011111 0 124566766642 25899999987753 455554 7799999
Q ss_pred HHhCCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCC--c
Q 009167 322 CHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGA--L 391 (541)
Q Consensus 322 a~~~gi~lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~--~ 391 (541)
|++||+++|+||++... +.........|+++ ++|.++++ -...|++++++++++.+..... ..+.+ .
T Consensus 230 c~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~--~gK~l~~G-~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~g 306 (447)
T PRK06917 230 CDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMT--LGKGLGAG-YTPIAATVVSDRVMEPILRGSRSIMSGHTLSA 306 (447)
T ss_pred HHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEE--eeehhccC-CcceEEEEEcHHHHHHHhccCcccccccCCCC
Confidence 99999999999995421 11122334578876 78999864 1236777888888877653211 12222 3
Q ss_pred hHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC
Q 009167 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD 465 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~ 465 (541)
+|..+..++..++.+.. ..++..+.-+++.+.|++ +|.+. +.+|.|.|+.+++..+
T Consensus 307 npl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrG~Gl~~~ie~~~~ 368 (447)
T PRK06917 307 NPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIG------------------DVRGKGLLIGVEFVAD 368 (447)
T ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEE------------------EEeecceEEEEEEecc
Confidence 56666666666665532 223333444444444443 22222 2357888999998421
Q ss_pred ----------HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHH
Q 009167 466 ----------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLK 531 (541)
Q Consensus 466 ----------~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli 531 (541)
.+....+...+...|+-+...+.. + .|-..+.|||+.-+ ++.+.++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~-----~---------------~g~~~~~i~l~Ppl~it~~eid~~~ 428 (447)
T PRK06917 369 KKTKQPFSKSQAVASELISVAAKNGLLLYPAVAG-----Q---------------DGKEGDAVIIAPPMTITYSELDELL 428 (447)
T ss_pred CCcCCCCcchhHHHHHHHHHHHhCCcEEEecccc-----c---------------CCCCCCEEEEECCCcCCHHHHHHHH
Confidence 123455666655545433211000 0 01124578887553 4555666
Q ss_pred HHHHHHHhh
Q 009167 532 ADVLQALHA 540 (541)
Q Consensus 532 ~dL~~AL~~ 540 (541)
+.|+++|++
T Consensus 429 ~~l~~~l~~ 437 (447)
T PRK06917 429 SIFAKSVEE 437 (447)
T ss_pred HHHHHHHHH
Confidence 666666653
No 349
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.39 E-value=4.1e-11 Score=133.94 Aligned_cols=173 Identities=13% Similarity=0.186 Sum_probs=126.2
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC---
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
+.....+.++..|+++|++...++++|+ .+|..++++++++||.|++++++|.+.+..+ ...|+..+++.+.
T Consensus 193 ~~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haL----ilsga~PVYl~P~rn~ 268 (714)
T PRK15400 193 HSGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLM----MMSDVTPIYFRPTRNA 268 (714)
T ss_pred CChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHH----HHcCCeEEEecccccc
Confidence 3345778899999999999999999997 7899999999999999999999999977533 3346677666431
Q ss_pred ------------CHHHHHHhccCC-Cce---EEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-------
Q 009167 284 ------------DMEGLEAALNNN-NVS---LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------- 340 (541)
Q Consensus 284 ------------d~e~Le~al~~~-~tk---lV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~------- 340 (541)
+.+.|+++++++ +.+ .+++.+|+ ..|.+.|++.|+++|+.++ +++||+|+....
T Consensus 269 ~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~ 345 (714)
T PRK15400 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEG 345 (714)
T ss_pred cCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCC
Confidence 378898888643 123 68887775 6799999999999999887 689999876432
Q ss_pred ccccccCC---c--EEEECCccccCCCCCceEEEEEeChHH-HHHHHHHhhhcCC
Q 009167 341 QKALSLGA---D--LVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLGG 389 (541)
Q Consensus 341 ~~~~~~ga---D--ivv~S~sK~lgg~gd~~gG~lv~~~~l-i~~l~~~~~~~G~ 389 (541)
..+...|+ | +++.|.||.+++.+ .+.++-.+..+ .+++......+.+
T Consensus 346 ~sam~~ga~~~~~i~vtQStHKtL~alT--QaS~LHvkg~vd~~~~n~a~~m~~S 398 (714)
T PRK15400 346 KCGMSGGRVEGKVIYETQSTHKLLAAFS--QASMIHVKGDVNEETFNEAYMMHTT 398 (714)
T ss_pred cChhhcCCCCCCceEEEEchhhcccchh--HHhHHHHcCCCCHHHHHHHHHHHcC
Confidence 22334566 5 99999999998765 33333222221 2345544444443
No 350
>PRK06148 hypothetical protein; Provisional
Probab=99.38 E-value=3.3e-10 Score=133.50 Aligned_cols=288 Identities=15% Similarity=0.125 Sum_probs=173.7
Q ss_pred CCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHh-----hcccCC-
Q 009167 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIET-----VLPKMG- 274 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~-----~l~~~G- 274 (541)
+++.++...+|.++|+++.+. +.+.+++||++|+.++++.. .....+||+....|+|....... .-...+
T Consensus 658 ~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~ 737 (1013)
T PRK06148 658 TRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGK 737 (1013)
T ss_pred CCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCC
Confidence 467888899999999998864 56788999999999999743 22346788888888884211100 000011
Q ss_pred ---eEEEEe--------CCC--C-------HHHHHHhcc-----CCCceEEEEeCCCCCCCcccc----HHHHHHHHHhC
Q 009167 275 ---ITATVI--------DPA--D-------MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (541)
Q Consensus 275 ---i~v~~v--------d~~--d-------~e~Le~al~-----~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~ 325 (541)
-.+..+ +.. + .+.+++.++ .+++.+|++|......|.+.+ +++|.++|+++
T Consensus 738 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~ 817 (1013)
T PRK06148 738 GRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA 817 (1013)
T ss_pred CCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh
Confidence 011111 111 1 134554442 135899999999877787776 88999999999
Q ss_pred CCEEEEeCCCCC----C---CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCC--chHHHH
Q 009167 326 GAIVCIDGTFAT----P---LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAA 396 (541)
Q Consensus 326 gi~lIvDea~a~----~---~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~--~s~~~a 396 (541)
|+++|.||++.. + +.........||++ +.|.+|++ ...|.+++++++++.+.... .++.+ -+|..+
T Consensus 818 g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt--~gK~lggG--~Plgav~~~~ei~~~~~~g~-~~~~Tf~gnpla~ 892 (1013)
T PRK06148 818 GGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVT--MGKPIGNG--HPMGAVVTTREIADSFDNGM-EYFNTFGGNPVSC 892 (1013)
T ss_pred CCEEEEEecccCCCCCCCcchhhhhcCCCcceee--ecccccCC--cceEEEEEcHHHHhhccCCC-ccccCCCCCHHHH
Confidence 999999999642 1 11222334578877 79999864 35788888888887764311 11222 256666
Q ss_pred HHHHHhHHHHHHH--HHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-----
Q 009167 397 YLIIRGMKTLHLR--VQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----- 465 (541)
Q Consensus 397 ~l~l~~l~tl~~r--~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~----- 465 (541)
..++..++.+... .++..+.-+++.+.|++ +|.+. ..+|.|.|+.+++..+
T Consensus 893 aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~------------------~VrG~Gl~~gvel~~~~~~~~ 954 (1013)
T PRK06148 893 AIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIG------------------DVRGMGLFLGIELVTDRKTKA 954 (1013)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCce------------------EEeeeceEEEEEecCCccccC
Confidence 6666666655321 22222333334444432 23222 3367889999999532
Q ss_pred --HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009167 466 --LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 466 --~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~ 539 (541)
.+....+++.+...|+-+... |...+.|||...+ ++.+.+++.|+++|.
T Consensus 955 ~~~~~~~~i~~~~~~~Gvl~~~~-------------------------g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~ 1009 (1013)
T PRK06148 955 PATAIARYVKNGARERGILIGTE-------------------------GPHDNVLKIRPPLIFSRADADHLLEVLDDVLA 1009 (1013)
T ss_pred ccHHHHHHHHHHHHhCCeEEecc-------------------------CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH
Confidence 123556676666556543321 1123567776654 455566666666665
Q ss_pred h
Q 009167 540 A 540 (541)
Q Consensus 540 ~ 540 (541)
+
T Consensus 1010 ~ 1010 (1013)
T PRK06148 1010 A 1010 (1013)
T ss_pred H
Confidence 4
No 351
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.36 E-value=4.5e-10 Score=120.91 Aligned_cols=257 Identities=12% Similarity=0.104 Sum_probs=154.5
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHHHHhhcc----
Q 009167 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLP---- 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~-------p-Gd~Vlv~~~~y~~~~~~~~~~l~---- 271 (541)
.+.++...++.++|+++.+. +.+++++||++|+..+++.... + ..+||.....|++..........
T Consensus 84 ~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~ 163 (427)
T TIGR00508 84 GFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENS 163 (427)
T ss_pred ccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccc
Confidence 34567778899999998754 5788889999999998874321 2 25799999999884322111100
Q ss_pred ---cCC--e-EEEEeC-----------CCCHHHHHHhccC--CCceEEEEeCC-CCCCCccc----cHHHHHHHHHhCCC
Q 009167 272 ---KMG--I-TATVID-----------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCV----DVKLVSDLCHKKGA 327 (541)
Q Consensus 272 ---~~G--i-~v~~vd-----------~~d~e~Le~al~~--~~tklV~lesP-~NPtG~i~----dl~~Ia~la~~~gi 327 (541)
.++ . .+..++ ..|++++++.+.. +++.+|++|.. ++..|.+. .+++|.++|++||+
T Consensus 164 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~ 243 (427)
T TIGR00508 164 MHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDI 243 (427)
T ss_pred ccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCC
Confidence 000 0 011111 1145677777642 24889999986 65555443 38899999999999
Q ss_pred EEEEeCCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh---hhcCC--CchHHHH
Q 009167 328 IVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGG--ALNPNAA 396 (541)
Q Consensus 328 ~lIvDea~a~~-~-----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~---~~~G~--~~s~~~a 396 (541)
++|+||++... . .........|+++ ++|.++|+ -...+.+++++++.+.++... ..++. ..+|..+
T Consensus 244 llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~gG-~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~ 320 (427)
T TIGR00508 244 LLIADEIATGFGRTGKLFACEHAGVVPDILC--VGKALTGG-YMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLAC 320 (427)
T ss_pred EEEEeccccCCCcCCccchhhhcCCCCCEEE--echhhhcC-cccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHH
Confidence 99999996321 1 1112334578887 79999643 234677888888888776421 01111 2356666
Q ss_pred HHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHH
Q 009167 397 YLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 474 (541)
Q Consensus 397 ~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~ 474 (541)
..++..++.+.. ..++..+...++.+.|++... +|.+ ...+|.|.|+.+++... .....+.+
T Consensus 321 aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~i----------~~vrg~G~~~~i~~~~~-~~~~~~~~ 384 (427)
T TIGR00508 321 AVAEASLAILLEGEWQKQVSAIENQLKRELSPLRK-----NPVV----------KDVRVLGAIGVVEMYKP-VNVEELQK 384 (427)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-----CCCE----------EeEeccccEEEEEECCc-cCHHHHHH
Confidence 666666664432 234444555666666654311 2211 12356789999999632 23455666
Q ss_pred HccCcCe
Q 009167 475 ALKIPYI 481 (541)
Q Consensus 475 ~L~~~~i 481 (541)
.|...|+
T Consensus 385 ~l~~~Gv 391 (427)
T TIGR00508 385 KFVEQGV 391 (427)
T ss_pred HHHHCCe
Confidence 6655454
No 352
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.33 E-value=2.1e-10 Score=123.89 Aligned_cols=255 Identities=13% Similarity=0.146 Sum_probs=145.8
Q ss_pred CCCchhHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHhc--------cC------CCEEEEcCCCCcchHHHHHh
Q 009167 206 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV--------PA------GGHIVTTTDCYRKTRIFIET 268 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g---~e~~i~~sSGs~Ai~~al~all--------~p------Gd~Vlv~~~~y~~~~~~~~~ 268 (541)
.+.++...+|.++|+++.+ .+.+.+++||++|+..+++... .. ..+||.....|+|.......
T Consensus 88 ~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als 167 (443)
T PRK08297 88 DVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLS 167 (443)
T ss_pred CcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhh
Confidence 3556777788889998862 3578889999999999997541 01 25799999999884321111
Q ss_pred hcc-----c--CC------eEEEEe--C--C-----------CCHHHHHHhcc--CCCceEEEEeCCCCCCCcccc----
Q 009167 269 VLP-----K--MG------ITATVI--D--P-----------ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---- 314 (541)
Q Consensus 269 ~l~-----~--~G------i~v~~v--d--~-----------~d~e~Le~al~--~~~tklV~lesP~NPtG~i~d---- 314 (541)
.-. . +. +....+ + . .+++++++.+. .+++.+|++|......|.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~y 247 (443)
T PRK08297 168 LTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEF 247 (443)
T ss_pred hcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHH
Confidence 100 0 00 000001 0 0 12355566664 235899999998877787654
Q ss_pred HHHHHHHHHhCCCEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH-H--hh
Q 009167 315 VKLVSDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-L--HH 385 (541)
Q Consensus 315 l~~Ia~la~~~gi~lIvDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~-~--~~ 385 (541)
+++|.++|++||+++|+||++... .. ........|+++ ++|.++ ++|++.++ ++.+.+.. . ..
T Consensus 248 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~-----~~a~l~~~-~i~~~~~~~~~~~~ 319 (443)
T PRK08297 248 FAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA--FGKKTQ-----VCGIMAGR-RVDEVEDNVFAVSS 319 (443)
T ss_pred HHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEE--eccccc-----ccceecch-HHHHhhhhhccCcc
Confidence 889999999999999999996432 11 122234578887 789884 35666554 33221111 1 01
Q ss_pred hcCCC--chHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEE
Q 009167 386 VLGGA--LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE 461 (541)
Q Consensus 386 ~~G~~--~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~ 461 (541)
..+.+ .+|..+.+++..++.+.. ..++..+..+++.+.|++... .+|.+ ....+|.|.|+.++
T Consensus 320 ~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~---------~~~vrg~G~~~~i~ 386 (443)
T PRK08297 320 RINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAA----EFPAV---------VSNVRGRGLMCAFD 386 (443)
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----HCCCc---------ceeeeccceEEEEE
Confidence 12222 356666666666654432 233333444444444443100 11211 01235678999999
Q ss_pred EcCCHHHHHHHHHHccCcCee
Q 009167 462 VDGDLTATIKFIDALKIPYIA 482 (541)
Q Consensus 462 l~~~~~~~~~~l~~L~~~~ia 482 (541)
+.. ......+...+...|+-
T Consensus 387 ~~~-~~~~~~~~~~l~~~Gvl 406 (443)
T PRK08297 387 LPT-TADRDEVIRRLWEEGVL 406 (443)
T ss_pred ecC-HHHHHHHHHHHHHCCEE
Confidence 964 34455677666555543
No 353
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.33 E-value=8.1e-11 Score=131.55 Aligned_cols=171 Identities=13% Similarity=0.151 Sum_probs=125.8
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC----
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
.....+.++..|+++|++...++++|+ .+|..++++++++||.|++++++|.+.+.. +...|+..+++.+.
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~a----Lilsga~PVYl~P~~n~~ 269 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHL----LMMSDVVPIWLKPTRNAL 269 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHH----HHHcCCeeEEeccccccc
Confidence 345778899999999999999999997 789999999999999999999999997753 33346777776432
Q ss_pred ------C-----HHHHHHhccCC----CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEE-EEeCCCCCCCcc------
Q 009167 284 ------D-----MEGLEAALNNN----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV-CIDGTFATPLNQ------ 341 (541)
Q Consensus 284 ------d-----~e~Le~al~~~----~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~l-IvDea~a~~~~~------ 341 (541)
+ .+.|+++++++ +++++++.+|+ ..|.+.|+++|+++| |+.+ ++||+|+....+
T Consensus 270 Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~ 345 (713)
T PRK15399 270 GILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQG 345 (713)
T ss_pred CCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCC
Confidence 2 38888888643 23688887775 689999999999998 6666 699998754322
Q ss_pred -ccccc--CCcEE---EECCccccCCCCCceEEEEEeChHH-HHHHHHHhhhcCC
Q 009167 342 -KALSL--GADLV---LHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLGG 389 (541)
Q Consensus 342 -~~~~~--gaDiv---v~S~sK~lgg~gd~~gG~lv~~~~l-i~~l~~~~~~~G~ 389 (541)
.+... ++|.+ +.|.||.+++.+ .+.++-.+..+ .+++......+.+
T Consensus 346 ~sam~~~~~aD~~i~~tQStHKtL~alT--QaS~iHvk~~vd~~~~n~a~~m~~S 398 (713)
T PRK15399 346 KSGMSGERVPGKVIFETQSTHKMLAAFS--QASLIHIKGEYDEETFNEAFMMHTS 398 (713)
T ss_pred cChhhCCCCCCeeeeeeeehhccccccc--hheeeeecCCCCHHHHHHHHHHHcC
Confidence 22222 57877 999999999876 45666554332 2445554444443
No 354
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.33 E-value=3.8e-10 Score=112.70 Aligned_cols=252 Identities=19% Similarity=0.209 Sum_probs=162.6
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc------c--CCC--EEEEcCCCCcc-hHH---------HHHh
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV------P--AGG--HIVTTTDCYRK-TRI---------FIET 268 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all------~--pGd--~Vlv~~~~y~~-~~~---------~~~~ 268 (541)
|....++++.+++++|.+..+-+++|.+|.+.++...- + |.| .|+.....|++ +.. .++.
T Consensus 100 nd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~ 179 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDG 179 (427)
T ss_pred hhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhc
Confidence 45567899999999999999999999999999886331 2 323 45555566655 111 1111
Q ss_pred hcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC------
Q 009167 269 VLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------ 338 (541)
Q Consensus 269 ~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~------ 338 (541)
.-....-.+..++..|.++|+.+++..+++.+++|.++..-|.++| ++++.++|.+|++++|.||++...
T Consensus 180 fgp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~ 259 (427)
T KOG1402|consen 180 FGPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKL 259 (427)
T ss_pred cCCCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcE
Confidence 1111112256677789999999998777999999999999999987 889999999999999999996431
Q ss_pred CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCCchHHHHHHHHHhHHHHHHHHHHHHHH
Q 009167 339 LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTLHLRVQQQNST 416 (541)
Q Consensus 339 ~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~ 416 (541)
+..+......|+++ +.|.++|+-- ....++++++++-.+.... ..+|+ +|+.+..+...|+-+. -++..++
T Consensus 260 la~d~env~PDivi--lgKalSGG~~-Pvsavl~~~~im~~~~pgeHgsTygg--NpLg~~vaiAalevi~--eekL~er 332 (427)
T KOG1402|consen 260 LACDYENVRPDIVI--LGKALSGGVY-PVSAVLADDDIMLNIKPGEHGSTYGG--NPLGCAVAIAALEVIV--EEKLVER 332 (427)
T ss_pred EEeehhhcCCCeEE--EeccccCCee-eeEEEEecHHHHhccCCCccccccCC--ChHHHHHHHHHHHHHH--HHHHHHH
Confidence 12333344579998 8899987542 2344556777766555322 23333 4566666555666543 2345566
Q ss_pred HHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC---HHHHHHHHHHccCcC
Q 009167 417 ALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPY 480 (541)
Q Consensus 417 a~~la~~L~----~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~---~~~~~~~l~~L~~~~ 480 (541)
+..|.+.|. +.+. .+|. ..+..+|.|.+..+++... ..++-.+.-.++..+
T Consensus 333 a~~lG~~l~~~L~~l~~----~~p~---------~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g 390 (427)
T KOG1402|consen 333 AAKLGEILRDQLNKLQK----KFPH---------VVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENG 390 (427)
T ss_pred HHHHHHHHHHHHHhccc----cccc---------hhheeeccceEEEEEeccccccchhHHHHHHcccccc
Confidence 666655443 3321 1222 1234577888888888632 234445555555443
No 355
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.32 E-value=1.2e-09 Score=112.13 Aligned_cols=283 Identities=15% Similarity=0.143 Sum_probs=150.1
Q ss_pred hhHHHHHHHHHHHhCC--CcEEEeCCHH-HHHHHHHH-H----hcc--------CCCEEEEcCCCCcchHHHHHhhcccC
Q 009167 210 PTTVVVEEKMSALEGA--ESTVIMASGM-SASTVMLL-A----LVP--------AGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~--e~~i~~sSGs-~Ai~~al~-a----ll~--------pGd~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
....++|+.+|+++|. ++.|+..+.+ .-+.-++. + +.. +.-+.+++-|.|...+ .+.+.+
T Consensus 69 ~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHF----ai~E~~ 144 (425)
T PF12897_consen 69 DGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHF----AITEHF 144 (425)
T ss_dssp S--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHH----HHHHHC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHH----HHHHhh
Confidence 4577899999999998 4566665554 33322221 2 111 1236899999997655 456778
Q ss_pred CeEEEEeCC----CCHHHHHHhcc-CCCceEEEEeCC--CCCCCccccHHHHHHHH----HhCCCEEEEeCCCCCCCcc-
Q 009167 274 GITATVIDP----ADMEGLEAALN-NNNVSLFFTESP--TNPFLRCVDVKLVSDLC----HKKGAIVCIDGTFATPLNQ- 341 (541)
Q Consensus 274 Gi~v~~vd~----~d~e~Le~al~-~~~tklV~lesP--~NPtG~i~dl~~Ia~la----~~~gi~lIvDea~a~~~~~- 341 (541)
|++.+.|+. .|++.+++.+. +..+|.||+ .| +||||.++.-+.+.++| ...+..++-||+|+.....
T Consensus 145 Giemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWc-VP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~ 223 (425)
T PF12897_consen 145 GIEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWC-VPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYD 223 (425)
T ss_dssp T-EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE--SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSS
T ss_pred CcEEEecCCCCCCCCHHHHHHHHhcCCccceEEe-CCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccc
Confidence 999988864 38999999984 335899987 55 49999999977666665 3568999999998864431
Q ss_pred -c-------cc-------ccCCcEEEECCccc-cCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHH---HHHHHh
Q 009167 342 -K-------AL-------SLGADLVLHSATKF-IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAA---YLIIRG 402 (541)
Q Consensus 342 -~-------~~-------~~gaDivv~S~sK~-lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a---~l~l~~ 402 (541)
. .+ ..+.-++..|+||. |.|.| .+++.++++-++.+++..........-.++ ...++.
T Consensus 224 ~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaG---va~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d 300 (425)
T PF12897_consen 224 EEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAG---VAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFKD 300 (425)
T ss_dssp SSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS----EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHS
T ss_pred cccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcc---eeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhcC
Confidence 1 11 01234778899995 55544 578888888777776654433332222222 222233
Q ss_pred HH-HHHHHHHHHHHH----HHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHH
Q 009167 403 MK-TLHLRVQQQNST----ALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFI 473 (541)
Q Consensus 403 l~-tl~~r~~~~~~~----a~~la~~L~~~----p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l 473 (541)
.+ -+...|+++.+. .+.+.+.|+++ .++..+..|. +|.+|||++..+ .+.+.+
T Consensus 301 ~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~----------------GGYFIsld~~~G--~AkrvV 362 (425)
T PF12897_consen 301 AEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPK----------------GGYFISLDVLDG--TAKRVV 362 (425)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---S----------------BSS-EEEEESTT---HHHHH
T ss_pred hhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCC----------------CceEEEEecCCC--hHHHHH
Confidence 33 444555555432 22333334332 2466666664 677999998764 566777
Q ss_pred HHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009167 474 DALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVL 535 (541)
Q Consensus 474 ~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~ 535 (541)
+..+..|+.....|. ..|.. ..-.+..|||.......+++...++
T Consensus 363 ~lakeAGV~LT~AGA----tfPyg-------------~DP~D~nIRiAPS~P~leel~~Am~ 407 (425)
T PF12897_consen 363 ELAKEAGVALTPAGA----TFPYG-------------KDPRDSNIRIAPSYPSLEELETAMD 407 (425)
T ss_dssp HHHHHTTEE---TTT----TSGGG---------------TTS-EEEE--SSS-HHHHHHHHH
T ss_pred HHHHHhCceeCCCCC----CCCCC-------------CCCCCCcEEecCCCCCHHHHHHHHH
Confidence 777777877665332 12221 0113679999999988877655443
No 356
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.32 E-value=9.6e-11 Score=123.78 Aligned_cols=223 Identities=18% Similarity=0.233 Sum_probs=142.0
Q ss_pred CchhHHHHHH----HHHHHhCCC---------cEEEeCCHHHHHHHHHHHhc--------cCC-----C-EEEEcCCCCc
Q 009167 208 GNPTTVVVEE----KMSALEGAE---------STVIMASGMSASTVMLLALV--------PAG-----G-HIVTTTDCYR 260 (541)
Q Consensus 208 ~~p~~~~Le~----~LA~l~g~e---------~~i~~sSGs~Ai~~al~all--------~pG-----d-~Vlv~~~~y~ 260 (541)
..|...++|+ .+++++|.+ ..+++++|++++..++.+.. ..| . .|++++..|.
T Consensus 73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~ 152 (373)
T PF00282_consen 73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHY 152 (373)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-T
T ss_pred cccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccccc
Confidence 4566655555 556666755 37889999999887775431 112 2 5777887888
Q ss_pred chHHHHHhhcccCCeEEEEeCCC-----CHHHHHHhccC----CCce-EEEEeCCCCCCCccccHHHHHHHHHhCCCEEE
Q 009167 261 KTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNN----NNVS-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 261 ~~~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~----~~tk-lV~lesP~NPtG~i~dl~~Ia~la~~~gi~lI 330 (541)
+.. +.+..+|+.++.++.+ |+++|++++.+ +++- +|+....+..+|.+-|+++|+++|++++++++
T Consensus 153 S~~----Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlH 228 (373)
T PF00282_consen 153 SIE----KAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLH 228 (373)
T ss_dssp HHH----HHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEE
T ss_pred HHH----HhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeee
Confidence 755 4444556666666533 78888887743 1223 56666777889999999999999999999999
Q ss_pred EeCCCCCCCcc----cccc---cCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHH----HHhh-------------
Q 009167 331 IDGTFATPLNQ----KALS---LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIR----NLHH------------- 385 (541)
Q Consensus 331 vDea~a~~~~~----~~~~---~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~----~~~~------------- 385 (541)
||++|+..... +... ..+|-++.++||+++.+-+ .|+++.++ ....... .+..
T Consensus 229 VDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~--~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~ 306 (373)
T PF00282_consen 229 VDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYG--CGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYG 306 (373)
T ss_dssp EEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS---EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEE
T ss_pred ecccccccccccccccccccccccccccccchhhhhcCCcc--ceeEEeecccchHHHhccChhhhcccccccccccccc
Confidence 99998873321 1221 2479999999999987753 56666554 3332211 0000
Q ss_pred hc---CCC-chHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCC
Q 009167 386 VL---GGA-LNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 436 (541)
Q Consensus 386 ~~---G~~-~s~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P 436 (541)
.. ++. ...+..|+.++ |.+.+..++++..+.++++++.|++++..+-+.-|
T Consensus 307 ~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~ 363 (373)
T PF00282_consen 307 DYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEP 363 (373)
T ss_dssp EGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTT
T ss_pred cccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 00 011 12345565554 55678888999999999999999999886655434
No 357
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.31 E-value=1.2e-09 Score=125.06 Aligned_cols=238 Identities=15% Similarity=0.170 Sum_probs=143.9
Q ss_pred CCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhcc---------------------CCCEEEEcCCCCcc
Q 009167 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVP---------------------AGGHIVTTTDCYRK 261 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~all~---------------------pGd~Vlv~~~~y~~ 261 (541)
.+.++...+|.++|++..+. +.+++++||++|++.+++...+ ...+||.-...|+|
T Consensus 405 ~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG 484 (817)
T PLN02974 405 ENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHG 484 (817)
T ss_pred ccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCC
Confidence 45677788899999887652 4678888999999988863311 12469999999988
Q ss_pred h-HHHHHhh--------c-cc----CCeEE----EE---------eCCC-------------------------------
Q 009167 262 T-RIFIETV--------L-PK----MGITA----TV---------IDPA------------------------------- 283 (541)
Q Consensus 262 ~-~~~~~~~--------l-~~----~Gi~v----~~---------vd~~------------------------------- 283 (541)
. ...+... + .. .+..+ .+ ++..
T Consensus 485 ~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~ 564 (817)
T PLN02974 485 DTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKA 564 (817)
T ss_pred CCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHH
Confidence 2 2211100 0 00 01000 00 0000
Q ss_pred CHHHHHHhcc-------CCCceEEEEeCC-CCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC------Ccccccc
Q 009167 284 DMEGLEAALN-------NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------LNQKALS 345 (541)
Q Consensus 284 d~e~Le~al~-------~~~tklV~lesP-~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~------~~~~~~~ 345 (541)
..+.+++.|+ .+++.+|++|.. .+-.|.+.+ +++|.++|++||+++|.||++..+ +..+...
T Consensus 565 ~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~g 644 (817)
T PLN02974 565 YRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLG 644 (817)
T ss_pred HHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcC
Confidence 0144666553 235899999985 666787765 779999999999999999996432 1223334
Q ss_pred cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH----hhhcCC--CchHHHHHHHHHhHHHHHHH--HHHHHHHH
Q 009167 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVLGG--ALNPNAAYLIIRGMKTLHLR--VQQQNSTA 417 (541)
Q Consensus 346 ~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~----~~~~G~--~~s~~~a~l~l~~l~tl~~r--~~~~~~~a 417 (541)
...||++ +.|.++|+- +..|++++++++.+.+..- ...+|. .-+|..+..++..|+.+... .+...++.
T Consensus 645 v~PDIi~--~gKgLtgG~-~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~ 721 (817)
T PLN02974 645 CKPDIAC--YAKLLTGGL-VPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPG 721 (817)
T ss_pred CCCCEEe--ecccccCCC-CccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 4578988 889998652 3467778888888877421 011232 24577777777777665431 11222333
Q ss_pred HHHH--------HHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC
Q 009167 418 LRMA--------KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 418 ~~la--------~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~ 464 (541)
..+. +.|.++|.|..| +|.|.|+.+++..
T Consensus 722 ~~l~~~l~~~l~~~l~~~p~V~~V------------------Rg~Gl~~~iel~~ 758 (817)
T PLN02974 722 SRLRELWDEELVRAISSLPNVERV------------------VSLGTVLALELDA 758 (817)
T ss_pred HHHHHHHHHHHHHHHhhCCCeeEE------------------EeeeeEEEEEEec
Confidence 2222 233445555444 4578899999963
No 358
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.30 E-value=3.4e-10 Score=115.52 Aligned_cols=261 Identities=17% Similarity=0.213 Sum_probs=163.1
Q ss_pred CccCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHh-c-cCCCEEEEcCCCCcchHHHHHhh--cccC--
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL-V-PAGGHIVTTTDCYRKTRIFIETV--LPKM-- 273 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~al-l-~pGd~Vlv~~~~y~~~~~~~~~~--l~~~-- 273 (541)
|...-|.+|...++.++|++.+.. ..+++++||++|+.++++.. + ...-+||.-+..|++.....-.+ +..+
T Consensus 84 H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~ 163 (442)
T KOG1404|consen 84 HTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQ 163 (442)
T ss_pred EeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccc
Confidence 445667788888999999988865 45788899999999988643 2 22237888888888743211000 1110
Q ss_pred ---Ce--EEEEeC-CC--------C---------HHHHHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHHHHHH
Q 009167 274 ---GI--TATVID-PA--------D---------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 274 ---Gi--~v~~vd-~~--------d---------~e~Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia~la~ 323 (541)
+. .+.... ++ + .+++++.+. +.++.+.+.|++....|.+.+ +++..++|+
T Consensus 164 ~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~ 243 (442)
T KOG1404|consen 164 NFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVR 243 (442)
T ss_pred cCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHH
Confidence 00 011111 10 1 244444442 235788899999988888875 889999999
Q ss_pred hCCCEEEEeCCCCC----C--CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh---hhcCCCchHH
Q 009167 324 KKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPN 394 (541)
Q Consensus 324 ~~gi~lIvDea~a~----~--~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~---~~~G~~~s~~ 394 (541)
++|.++|.||++.. + +.+...+.-.||+ ++.|.+|.+ ...|.++..+|+.+.+.+.. ..+|+ +|.
T Consensus 244 k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIv--TmAKgiGnG--~Pl~AVvtt~EIa~v~~~~~~~fnTygg--nP~ 317 (442)
T KOG1404|consen 244 KRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIV--TMAKGIGNG--FPLGAVVTTPEIADVLNQKSSHFNTYGG--NPV 317 (442)
T ss_pred HcCCEEEehhhhhccccccccccccccCCCccHH--HHHhhccCC--CcceeeecCHHHHHHHHhccccccccCC--Cch
Confidence 99999999999543 1 1122222234665 499999865 35677777888888776543 33444 466
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh--------CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH
Q 009167 395 AAYLIIRGMKTLHLRVQQQNSTALRMAKILEA--------HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL 466 (541)
Q Consensus 395 ~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~--------~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~ 466 (541)
++...+..|+-+. .+++++++..+..+|.+ ||.|.. .+|.|.|+.+|+-.+.
T Consensus 318 a~avg~aVL~Vik--ee~LqE~aa~vG~yl~~~l~~l~d~h~iIGd------------------VRG~GLm~GvE~V~dk 377 (442)
T KOG1404|consen 318 ACAVGLAVLKVIK--EENLQENAAEVGSYLLEKLAALKDKHPIIGD------------------VRGRGLMLGVELVSDK 377 (442)
T ss_pred hHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhhcCCceee------------------cccceeEEEEEEeccc
Confidence 6666555555543 33555666666655543 333322 3678899999985421
Q ss_pred --------HHHHHHHHHccCcCeecccCCc
Q 009167 467 --------TATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 467 --------~~~~~~l~~L~~~~iavS~G~~ 488 (541)
.....+.+.++..|+-+.-|+.
T Consensus 378 ~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i 407 (442)
T KOG1404|consen 378 SEPKPPATAEGAVIGEQCKELGVLVGKGGI 407 (442)
T ss_pred CCCCCcchHHHHHHHHHHHHhCeeeecccc
Confidence 3455667777777777666654
No 359
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.29 E-value=3.8e-10 Score=112.71 Aligned_cols=161 Identities=18% Similarity=0.272 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHhCC-CcEEEeCCHH-HHHHHHHHHhc--cCCCEEEEcCCC-CcchHHHHHhhcccCCeEEEEeCCCCHH
Q 009167 212 TVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDC-YRKTRIFIETVLPKMGITATVIDPADME 286 (541)
Q Consensus 212 ~~~Le~~LA~l~g~-e~~i~~sSGs-~Ai~~al~all--~pGd~Vlv~~~~-y~~~~~~~~~~l~~~Gi~v~~vd~~d~e 286 (541)
-+.|-.+||-+.|+ +..++++.++ --++-+|.+.+ ++|+.||++.-. |+.-+...+......++.....-.+.++
T Consensus 78 p~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~ 157 (407)
T COG3844 78 PERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPR 157 (407)
T ss_pred hhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChH
Confidence 35678889999998 3344444444 44455555544 458888887654 4433322323333334332222234678
Q ss_pred HHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEEECCccccCCCCCc
Q 009167 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDV 365 (541)
Q Consensus 287 ~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv~S~sK~lgg~gd~ 365 (541)
+++++++++ +.+|++.+.+--||...|+.+|.+++|++|++++-|=+++.+ ++.+....|+|+-|.+.+||++|+.+.
T Consensus 158 ~~~~~~~dd-~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGa 236 (407)
T COG3844 158 ALEEAITDD-VAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGA 236 (407)
T ss_pred HHHHhhccc-eEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCC
Confidence 999999885 999999999999999999999999999999999999998765 445666779999999999999987666
Q ss_pred eEEEEEeC
Q 009167 366 LAGSISGS 373 (541)
Q Consensus 366 ~gG~lv~~ 373 (541)
.+|+.+.+
T Consensus 237 pa~l~v~~ 244 (407)
T COG3844 237 PAGLFVAP 244 (407)
T ss_pred ceeEEecc
Confidence 67766654
No 360
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.28 E-value=6e-10 Score=120.58 Aligned_cols=278 Identities=12% Similarity=0.057 Sum_probs=159.9
Q ss_pred CCchhHHHHHHHHHH----HhC--CCcEEEeCCHHHHHHHHHHHhcc--------------------------CC---CE
Q 009167 207 YGNPTTVVVEEKMSA----LEG--AESTVIMASGMSASTVMLLALVP--------------------------AG---GH 251 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~----l~g--~e~~i~~sSGs~Ai~~al~all~--------------------------pG---d~ 251 (541)
+.++...+|.++|++ +.. .+.+++++||++|+..+++.... +| .+
T Consensus 98 ~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ 177 (464)
T TIGR00699 98 LGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLS 177 (464)
T ss_pred CCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCE
Confidence 566667777777654 443 25688889999999999874411 11 27
Q ss_pred EEEcCCCCcchHHHHHhhc-----ccCCe---EEEEeCC-------------------CCHHHHHHhccC--CCceEEEE
Q 009167 252 IVTTTDCYRKTRIFIETVL-----PKMGI---TATVIDP-------------------ADMEGLEAALNN--NNVSLFFT 302 (541)
Q Consensus 252 Vlv~~~~y~~~~~~~~~~l-----~~~Gi---~v~~vd~-------------------~d~e~Le~al~~--~~tklV~l 302 (541)
||.....|++......... ...+. .+..++. .+++.+++++++ +++.+|++
T Consensus 178 ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~ 257 (464)
T TIGR00699 178 ILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIV 257 (464)
T ss_pred EEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 9999999988432211110 00011 1111110 135567777742 25899999
Q ss_pred eCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC-C-----cccccccC--CcEEEECCccccCCCCCceEEEE
Q 009167 303 ESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-L-----NQKALSLG--ADLVLHSATKFIGGHNDVLAGSI 370 (541)
Q Consensus 303 esP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~-~-----~~~~~~~g--aDivv~S~sK~lgg~gd~~gG~l 370 (541)
|......|.+.+ +++|.++|++||+++|+||++... . ........ .|+++ ++|.+++. |++
T Consensus 258 EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t--~gK~lg~g-----G~~ 330 (464)
T TIGR00699 258 EPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVT--FSKKFQTA-----GYF 330 (464)
T ss_pred eCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEE--ehhhhccC-----Ccc
Confidence 999988898887 999999999999999999995321 1 11112222 78877 78999633 333
Q ss_pred EeChHHHHHHHHHhhhcCCC--chHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CC-CceEEeCCCCCCC
Q 009167 371 SGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEA----HP-KVKRVHYPGLKSH 441 (541)
Q Consensus 371 v~~~~li~~l~~~~~~~G~~--~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~----~p-~v~~v~~P~l~s~ 441 (541)
++++ .+..... ...+.+ .+|..+..++..++.+.. ..++..+.-+++.+.|++ +| .|..
T Consensus 331 ~~~~-~~~~~~~--~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~--------- 398 (464)
T TIGR00699 331 FHDP-AFRPNKP--YRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQN--------- 398 (464)
T ss_pred ccch-hccCCCC--cccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceee---------
Confidence 3332 2111001 011222 245666665555555431 112222222344444432 33 2222
Q ss_pred chhhhHhhhcc--CcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEE
Q 009167 442 PEHHIATQQMT--GFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR 519 (541)
Q Consensus 442 p~~~l~~~~~~--g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IR 519 (541)
.+ |.|.|+.++++. ......+++.+...|+-+... ..+.||
T Consensus 399 ---------vRg~G~Glm~gie~~~-~~~~~~i~~~~~~~Gvl~~~~---------------------------g~~~ir 441 (464)
T TIGR00699 399 ---------LRGKGRGTFIAWDTPD-EAKRDKLLKKARNNGVNIGGC---------------------------GVKAIR 441 (464)
T ss_pred ---------ecccCeEEEEEEecCC-HHHHHHHHHHHHHCCcEEecC---------------------------CCCeEE
Confidence 23 578999999963 344567777765555433210 135789
Q ss_pred EEecCCCHHHHHHHHHHHHhh
Q 009167 520 FSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 520 lSvG~e~~edli~dL~~AL~~ 540 (541)
|...+-.+++.++.+.++|++
T Consensus 442 ~~Ppl~it~~eid~~~~~l~~ 462 (464)
T TIGR00699 442 LRPMLVFQKHHADIFLEIISK 462 (464)
T ss_pred EeCCCCCCHHHHHHHHHHHHH
Confidence 988877777777777777654
No 361
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.27 E-value=1.5e-10 Score=120.02 Aligned_cols=183 Identities=23% Similarity=0.334 Sum_probs=131.3
Q ss_pred HHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCC-----CCcchHHHHHhhcccCCeEEEEeCC---CCH
Q 009167 214 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTD-----CYRKTRIFIETVLPKMGITATVIDP---ADM 285 (541)
Q Consensus 214 ~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~-----~y~~~~~~~~~~l~~~Gi~v~~vd~---~d~ 285 (541)
.+.+.+..+.|++++.++++.+.|+.+++.++.+ +.+|+++.- .++.. ....+..|.++..+.. ...
T Consensus 72 ~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~-~~EvVis~g~lV~gg~~~v----~d~~~~aG~~l~EvG~tn~t~~ 146 (395)
T COG1921 72 ELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAE-GKEVVVSRGELVEGGAFRV----PDIIRLAGAKLVEVGTTNRTHL 146 (395)
T ss_pred HHHHHHhcccchhheeeECCcHHHHHHHHhhhcc-CCeEEEEccccccCCCCCh----hHHHHHcCCEEEEecccCcCCH
Confidence 5566666677788999999999999999988877 455555442 22222 2445556777777653 368
Q ss_pred HHHHHhccCCCceEEEEeCCCC-CCCccccHHHHHHHHHhCCCEEEEeCCCCCC-----CcccccccCCcEEEECCcccc
Q 009167 286 EGLEAALNNNNVSLFFTESPTN-PFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADLVLHSATKFI 359 (541)
Q Consensus 286 e~Le~al~~~~tklV~lesP~N-PtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-----~~~~~~~~gaDivv~S~sK~l 359 (541)
.+++.+|.++ |++++=.+-+| +.-...++++++++||++|+++++|.+-+.. -....+..|+|+|++|..|.+
T Consensus 147 ~d~~~AIne~-ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKll 225 (395)
T COG1921 147 KDYELAINEN-TALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLL 225 (395)
T ss_pred HHHHHHhccC-CeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhc
Confidence 8999999985 77655434444 2223457889999999999999999986543 224456789999999999999
Q ss_pred CCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH
Q 009167 360 GGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT 405 (541)
Q Consensus 360 gg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t 405 (541)
+|+. +|+++|+++++++++...-..+...+......+.+.++.
T Consensus 226 gGPq---aGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe~ 268 (395)
T COG1921 226 GGPQ---AGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALEL 268 (395)
T ss_pred CCCc---cceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHHH
Confidence 9985 999999999999998765555555555444444444444
No 362
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.27 E-value=1.4e-09 Score=114.79 Aligned_cols=249 Identities=14% Similarity=0.153 Sum_probs=151.6
Q ss_pred hhHHHHHHHHHHHhCCC--c-E-EEeCCHHHHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHhhcccCCe-EEEEeCC-
Q 009167 210 PTTVVVEEKMSALEGAE--S-T-VIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGI-TATVIDP- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e--~-~-i~~sSGs~Ai~~al~all-~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi-~v~~vd~- 282 (541)
....+.++.|.++++.+ . + ++.+||+.++.+++..++ ++||+|++.. .|+. ++...+++.+|+ ++..++.
T Consensus 39 ~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~--r~~~eia~~~g~~~v~~l~~~ 115 (374)
T TIGR01365 39 EKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGK--GWVTDVTKQLKLPDVRVLEAE 115 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHH--HHHHHHHHhcCCCCcEEEcCC
Confidence 34566788888898852 2 3 456788999999999999 5898888754 3432 333356777788 4665542
Q ss_pred ----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEEECCcc
Q 009167 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATK 357 (541)
Q Consensus 283 ----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv~S~sK 357 (541)
.++++++. ++ . |++++---.||...|+++|.+.. +++++|||.+-+.+ .+.+.. ++|+++.|..|
T Consensus 116 ~g~~~~~~~ve~--~~---~-v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d--~iDv~~tgsQK 185 (374)
T TIGR01365 116 YGKLPDLKKVDF--KN---D-VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH--KLDVVTFSWQK 185 (374)
T ss_pred CCCCCCHHHcCC--CC---C-EEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh--HCcEEEEechh
Confidence 26777762 22 1 33434334579999997666332 58999999984432 222222 49999999999
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHH---------hh----------hc-CC---CchHHHHHHHHHhHH------HHHH
Q 009167 358 FIGGHNDVLAGSISGSGKLVTQIRNL---------HH----------VL-GG---ALNPNAAYLIIRGMK------TLHL 408 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~~~li~~l~~~---------~~----------~~-G~---~~s~~~a~l~l~~l~------tl~~ 408 (541)
.++++++ .++++.+++.+++.... .. .. +. +++....+.+...++ -++.
T Consensus 186 ~L~~ppG--ls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~ 263 (374)
T TIGR01365 186 VLGGEGA--HGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKP 263 (374)
T ss_pred ccCCCCc--eEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHH
Confidence 9998873 46778888777654421 00 01 11 222233333333342 2667
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHH-----H-----HHHHHHHccC
Q 009167 409 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT-----A-----TIKFIDALKI 478 (541)
Q Consensus 409 r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~-----~-----~~~~l~~L~~ 478 (541)
+.+++.++++.+.+++++.+... + ++ .++.+ ....++.+.++.+.. . ..+|.+.|+.
T Consensus 264 ~~~Rh~~~a~~l~~~l~~lg~l~-~-~~---~~~~~--------rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 330 (374)
T TIGR01365 264 LIARADDNLAVLEAFVAKNNWIH-F-LA---ETPEI--------RSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEK 330 (374)
T ss_pred HHHHHHHHHHHHHHHHHHCCCcc-c-CC---CChhh--------cCCCeEEEEeCCccccccccchhhHHHHHHHHHHHH
Confidence 78888899999999998875321 1 11 11111 023356676643211 2 4677777776
Q ss_pred cCeecccC
Q 009167 479 PYIAPSFG 486 (541)
Q Consensus 479 ~~iavS~G 486 (541)
.++.+..|
T Consensus 331 ~gi~i~~G 338 (374)
T TIGR01365 331 EGVAYDIG 338 (374)
T ss_pred CCEEEecc
Confidence 66655544
No 363
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.26 E-value=3e-10 Score=119.84 Aligned_cols=238 Identities=19% Similarity=0.140 Sum_probs=149.2
Q ss_pred cccCccc-cCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc-CCCEEEEc
Q 009167 178 VNTSAYF-FKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTT 255 (541)
Q Consensus 178 ~~sst~~-~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~-pGd~Vlv~ 255 (541)
.+|.|.+ -++.++...... +.-.|+ ++|+..+|++.+++++|.+.++.+.+|..+...++..+++ +||++++.
T Consensus 46 LrSDTgT~apS~~m~aAM~~---GDD~Y~--gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~ 120 (467)
T TIGR02617 46 LLTDSGTGAVTQSMQAAMMR---GDEAYS--GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLD 120 (467)
T ss_pred CccCCCCCCCCHHHHHHHHc---CCcccc--cCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhccccccccccc
Confidence 4566666 366666555553 223465 7899999999999999999999999999999999999888 68877754
Q ss_pred CC-------CCcchHHHHHhhcccCCeEEEEe--------------C-CCCHHHHHHhccC---CCceEEEEeCCCCC-C
Q 009167 256 TD-------CYRKTRIFIETVLPKMGITATVI--------------D-PADMEGLEAALNN---NNVSLFFTESPTNP-F 309 (541)
Q Consensus 256 ~~-------~y~~~~~~~~~~l~~~Gi~v~~v--------------d-~~d~e~Le~al~~---~~tklV~lesP~NP-t 309 (541)
.. .|..+... .....|+.+..+ + ..|+++|+++|++ +++..+.++-.+|- .
T Consensus 121 ~~~~~v~hn~~fett~g---~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~G 197 (467)
T TIGR02617 121 RSKMVAFSNYFFDTTQG---HSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAG 197 (467)
T ss_pred ccccccceEEEEecchH---HHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCC
Confidence 43 22221111 111224333321 1 1389999999974 23444444334454 4
Q ss_pred Ccccc---HHHHHHHHHhCCCEEEEeCC--C--CC----------CCccccc----ccCCcEEEECCccccCCCCCceEE
Q 009167 310 LRCVD---VKLVSDLCHKKGAIVCIDGT--F--AT----------PLNQKAL----SLGADLVLHSATKFIGGHNDVLAG 368 (541)
Q Consensus 310 G~i~d---l~~Ia~la~~~gi~lIvDea--~--a~----------~~~~~~~----~~gaDivv~S~sK~lgg~gd~~gG 368 (541)
|.+++ ++++.++|++||+.++.|.+ + +. ......+ -..+|.+..|++|-++.+ +||
T Consensus 198 Gqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgAp---vGg 274 (467)
T TIGR02617 198 GQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVP---MGG 274 (467)
T ss_pred CEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCc---ccc
Confidence 67777 55888999999999999997 1 11 1111111 146899999999998866 588
Q ss_pred EEEeChH----HHHHHHHHhh------hcCCCchHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHhC
Q 009167 369 SISGSGK----LVTQIRNLHH------VLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 369 ~lv~~~~----li~~l~~~~~------~~G~~~s~~~a~l~l~~l~tl--~~r~~~~~~~a~~la~~L~~~ 427 (541)
+++++++ +.++++.... .+|+ ++.-+...+..+|+.. ...++......++|.+.|.+.
T Consensus 275 ~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGG-lagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~ 344 (467)
T TIGR02617 275 LLCFKDDSFFDVYTECRTLCVVQEGFPTYGG-LEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEI 344 (467)
T ss_pred eEEecchhHHHHHHHHHhhcccccCCcCcCc-hhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhC
Confidence 9988654 3344443221 2343 3333333333355431 234445556678888888775
No 364
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.23 E-value=1.4e-09 Score=117.54 Aligned_cols=157 Identities=22% Similarity=0.329 Sum_probs=121.3
Q ss_pred hhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC------
Q 009167 210 PTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------ 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~------ 282 (541)
....+.++..|+.+|++...++.+|+ .|+..++++++++||.|++++++|.+....+ -..|....++.+
T Consensus 70 G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~gl----ilaGa~Pvyl~p~~np~~ 145 (557)
T COG1982 70 GPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGL----ILAGATPVYLEPSRNPLY 145 (557)
T ss_pred ccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHH----HHcCCceEEecCCCCccc
Confidence 35678899999999999999999998 8999999999999999999999999876543 223555555432
Q ss_pred -----CCHHHHHHhccCC-Cc-eEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC------cccccccCCc
Q 009167 283 -----ADMEGLEAALNNN-NV-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL------NQKALSLGAD 349 (541)
Q Consensus 283 -----~d~e~Le~al~~~-~t-klV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~------~~~~~~~gaD 349 (541)
.+.+.+++++.++ .. |++++.+|+ -.|.+.++++|.++++++++++.+|++..... +....+.++|
T Consensus 146 gi~ggI~~~~~~~~l~~~~~~~k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~ 224 (557)
T COG1982 146 GIIGGIPLETFKEALLAHPDAEKLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGAD 224 (557)
T ss_pred cccCCCCHHHHHHHHHhChhhheeEEEecCc-cceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCce
Confidence 2678888776543 24 788886665 46999999999999999999999999955422 2223346899
Q ss_pred EEEECCccccCCCCCceEEEEEeC
Q 009167 350 LVLHSATKFIGGHNDVLAGSISGS 373 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv~~ 373 (541)
+++.|.||.+++.+ .+.++-.+
T Consensus 225 ~~tqS~HK~l~alS--QaS~iHv~ 246 (557)
T COG1982 225 FVTQSTHKLLAALS--QASMIHVK 246 (557)
T ss_pred EEEechhhhhhhhh--hhHHHhhC
Confidence 99999999998765 44455443
No 365
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.23 E-value=1.6e-09 Score=124.39 Aligned_cols=162 Identities=20% Similarity=0.254 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh-c--cCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHH
Q 009167 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-V--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (541)
Q Consensus 212 ~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~al-l--~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e 286 (541)
.-++++.++++.|.+ .+-++..++++.++++++. . +++++|++++..|+.+...++..++..|++++.+| ++
T Consensus 111 l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~---~~ 187 (939)
T TIGR00461 111 LLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD---CS 187 (939)
T ss_pred HHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc---HH
Confidence 446789999999986 4466767776555555553 2 23489999999999999888878888999998875 45
Q ss_pred HHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCC-CCcccccccCCcEEEECCccccCCC--C
Q 009167 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIGGH--N 363 (541)
Q Consensus 287 ~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~-~~~~~~~~~gaDivv~S~sK~lgg~--g 363 (541)
+|++.+ + +..|++.+|+ -+|.+.|+++|++++|++|++++++.-... .....|-++|+||++.+..++.-++ |
T Consensus 188 ~l~~~~--~-~~~v~~q~Pn-~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~G 263 (939)
T TIGR00461 188 DIKKAV--D-VFGCLLQYPA-TDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYG 263 (939)
T ss_pred HHhhcC--C-EEEEEEECCC-CCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCC
Confidence 666665 2 7888888887 589999999999999999999999655433 4557788999999988776653311 1
Q ss_pred CceEEEEEeChHHHHHH
Q 009167 364 DVLAGSISGSGKLVTQI 380 (541)
Q Consensus 364 d~~gG~lv~~~~li~~l 380 (541)
+.-+|++..++++..++
T Consensus 264 GP~aG~~a~~~~l~r~l 280 (939)
T TIGR00461 264 GPHAAFFAVKDEYNRKM 280 (939)
T ss_pred CCceeeeeecHhhHhhC
Confidence 12378888877766544
No 366
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.21 E-value=1.4e-08 Score=105.19 Aligned_cols=161 Identities=24% Similarity=0.373 Sum_probs=122.8
Q ss_pred HHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHH
Q 009167 213 VVVEEKMSALEGAE--STVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 213 ~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~al---l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~ 287 (541)
-+++..+++|.|.+ .+=++-.|+++-++++++. -++.++++++..+|+.+...++..++.+|+++..++.+|+++
T Consensus 123 fefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~ 202 (450)
T COG0403 123 FEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDD 202 (450)
T ss_pred HHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhh
Confidence 35688899999974 4555666665444444443 223589999999999999999999999999999999999999
Q ss_pred HHHhccCCCceEEEEeCCCCCCC-ccccHHHHHHHHHhCCCEEEEeCC-CCCCCcccccccCCcEEEECCccc-----cC
Q 009167 288 LEAALNNNNVSLFFTESPTNPFL-RCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATKF-----IG 360 (541)
Q Consensus 288 Le~al~~~~tklV~lesP~NPtG-~i~dl~~Ia~la~~~gi~lIvDea-~a~~~~~~~~~~gaDivv~S~sK~-----lg 360 (541)
++++ .+..+..|+++.|+ -.| ...|+++|.+.+|++|+++++=.- .+..+...|-++|+||++.+..-+ ||
T Consensus 203 l~~~-~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfG 280 (450)
T COG0403 203 LESA-DDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFG 280 (450)
T ss_pred hhhc-cccCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCC
Confidence 9988 54358999999998 566 667799999999999988876322 333455678889999999998765 44
Q ss_pred CCCCceEEEEEeChHHHH
Q 009167 361 GHNDVLAGSISGSGKLVT 378 (541)
Q Consensus 361 g~gd~~gG~lv~~~~li~ 378 (541)
|+. +|+...++++..
T Consensus 281 GPh---ag~fA~~~~~~R 295 (450)
T COG0403 281 GPH---AGYFAVKDEFKR 295 (450)
T ss_pred Ccc---eeeeeEhHhHhh
Confidence 443 788877665543
No 367
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.20 E-value=3.3e-09 Score=114.40 Aligned_cols=211 Identities=16% Similarity=0.188 Sum_probs=123.9
Q ss_pred hhHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHhc-cCC-CEEEEc-CCCCcchHHHHHh-hcccCCe------EEE
Q 009167 210 PTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV-PAG-GHIVTT-TDCYRKTRIFIET-VLPKMGI------TAT 278 (541)
Q Consensus 210 p~~~~Le~~LA~l~g-~e~~i~~sSGs~Ai~~al~all-~pG-d~Vlv~-~~~y~~~~~~~~~-~l~~~Gi------~v~ 278 (541)
+...+|.++|+++.+ .+.+.+++||++|+..+++... -.| .+|+.. ...|++....+.. .....+. .+.
T Consensus 88 ~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~ 167 (431)
T PRK06209 88 AIELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTV 167 (431)
T ss_pred HHHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccc
Confidence 334467888998875 3678889999999999987431 124 355554 3344331111100 0000111 123
Q ss_pred EeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc------cccccCCcE
Q 009167 279 VIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALSLGADL 350 (541)
Q Consensus 279 ~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~------~~~~~gaDi 350 (541)
.++..|+++|+++++. +++.+|++|......+..-.+++|.++|++||+++|+||++. ++.. ......+|+
T Consensus 168 ~~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t-G~~~~~~g~~~~~gv~PDi 246 (431)
T PRK06209 168 TFRYNDIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMIT-GFRWHMRGAQKLYGIVPDL 246 (431)
T ss_pred ccCCCCHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-cCCcCcchhhHHhCCCcce
Confidence 3456789999988852 247899998876442323348899999999999999999863 2211 112334677
Q ss_pred EEECCccccCCCCCceEEEEEeChHHHHH--HHHH--hh--hcCCCc--hHHHHHHHHHhHHHHHH--HHHHHHHHHHHH
Q 009167 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQ--IRNL--HH--VLGGAL--NPNAAYLIIRGMKTLHL--RVQQQNSTALRM 420 (541)
Q Consensus 351 vv~S~sK~lgg~gd~~gG~lv~~~~li~~--l~~~--~~--~~G~~~--s~~~a~l~l~~l~tl~~--r~~~~~~~a~~l 420 (541)
++ ++|.+|++ ..+|++++++++++. +... .. .++.+. +|..+..++..++.+.. ..++..+...++
T Consensus 247 ~t--~gK~lggG--~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l 322 (431)
T PRK06209 247 SC--FGKALGNG--FAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKL 322 (431)
T ss_pred ee--ehhhhcCC--cccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 55 89999864 357888888888775 2111 11 134343 34666666666665532 233344444455
Q ss_pred HHHHH
Q 009167 421 AKILE 425 (541)
Q Consensus 421 a~~L~ 425 (541)
.+.|+
T Consensus 323 ~~~L~ 327 (431)
T PRK06209 323 AAGVN 327 (431)
T ss_pred HHHHH
Confidence 55444
No 368
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.20 E-value=6.4e-10 Score=113.39 Aligned_cols=182 Identities=17% Similarity=0.159 Sum_probs=136.4
Q ss_pred hHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHH
Q 009167 211 TTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEA 290 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~ 290 (541)
.+-.+|+.||+++|.++.|+++-|-+++..++.++.+.||.|++......+... .++...-.+.++.++|.++++.
T Consensus 140 vHldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~----GlqlSRS~i~~Fkhndm~~ler 215 (467)
T KOG1358|consen 140 VHLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQK----GLQLSRSTISYFKHNDMEDLER 215 (467)
T ss_pred eecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCcEEEEehhhhHHHHH----HHhhhhheeEEecCCCHHHHHH
Confidence 456899999999999999999999999999999999999999998877766443 3333345677888999999987
Q ss_pred hccCCC------------ceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc----------ccccCC
Q 009167 291 ALNNNN------------VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK----------ALSLGA 348 (541)
Q Consensus 291 al~~~~------------tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~----------~~~~ga 348 (541)
.+.+.. -+.|++|...-++|.+.|+.+|.++..+|...+++||++..+...+ .....+
T Consensus 216 ll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~i 295 (467)
T KOG1358|consen 216 LLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDI 295 (467)
T ss_pred hccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccce
Confidence 764321 2468889999999999999999999999999999999976554322 111246
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHH--HHHHHHHhhhcCCCchHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKL--VTQIRNLHHVLGGALNPNAAYLII 400 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~l--i~~l~~~~~~~G~~~s~~~a~l~l 400 (541)
|+++.|+.-.++.. ||+.+|+.-+ .+++......+...++|..+..+.
T Consensus 296 Div~~sm~~alas~----GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~ 345 (467)
T KOG1358|consen 296 DIVTASMETALASG----GGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAI 345 (467)
T ss_pred eeeeeccccccccc----CceeecceeeEeeeeccccceeeeccCchhhhhhHH
Confidence 89999999988865 5788775432 234433333455556665444433
No 369
>PLN02452 phosphoserine transaminase
Probab=99.17 E-value=5.4e-09 Score=110.10 Aligned_cols=244 Identities=11% Similarity=0.022 Sum_probs=153.6
Q ss_pred hhHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe---C-
Q 009167 210 PTTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI---D- 281 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e---~~i~~-sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v---d- 281 (541)
...++.++.|.++++.+ +++++ +||+.++.+++..++.+||++++-...+.+-. +...++++|...+.. +
T Consensus 52 ~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r--~~~~a~~~g~~~~~~~~~~~ 129 (365)
T PLN02452 52 SIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKK--AAKEAKKYCKTNVIASGKDE 129 (365)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCCcEEEecCCC
Confidence 45677889999999863 35555 67789999999999999998888776665532 224556666543333 1
Q ss_pred ----CCCHHHHHHhccCCCceEEEEeCCCCCCCcc-ccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEEECC
Q 009167 282 ----PADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 355 (541)
Q Consensus 282 ----~~d~e~Le~al~~~~tklV~lesP~NPtG~i-~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv~S~ 355 (541)
..++++++ ..+ +.+.|++++-.-.||.. .|++++. ++++|+|.+...+ .+.+..++++|+ .|.
T Consensus 130 ~~~~~~~~~~~~--~~~-~~~~v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~~--~sa 198 (365)
T PLN02452 130 KYTKIPSVSEWE--LTP-DAKFVHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGVIY--AGA 198 (365)
T ss_pred CCCCCCChHHcC--CCC-CCcEEEECCCCCCCcEecCcccccC------CCeEEEECCccccCcccCHHHcCEEE--Eec
Confidence 12444432 123 36777775555567884 7777664 3899999996543 345555666655 699
Q ss_pred ccccCCCCCceEEEEEeChHHHHHHHHHhh---------h---cCCCchHHHHHHHHHhHHHH------HHHHHHHHHHH
Q 009167 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------V---LGGALNPNAAYLIIRGMKTL------HLRVQQQNSTA 417 (541)
Q Consensus 356 sK~lgg~gd~~gG~lv~~~~li~~l~~~~~---------~---~G~~~s~~~a~l~l~~l~tl------~~r~~~~~~~a 417 (541)
+|.+|++| .|+++.++++++++..... . +-.+++....+.+...++.+ +.+.++..+.+
T Consensus 199 qK~lGP~G---l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a 275 (365)
T PLN02452 199 QKNVGPSG---VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKA 275 (365)
T ss_pred ccccCCCC---eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 99998877 6788888888766432100 0 01233444444444444433 34556666778
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeec
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 483 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iav 483 (541)
+.+.++|++.+++ +.+.. .+.+ ....+++|.+++. +...+|++.++..|+..
T Consensus 276 ~~l~~~l~~~~G~---y~~~~--~~~~--------rs~~~vsF~~~~~-~~~~~f~~~~~~~g~~~ 327 (365)
T PLN02452 276 DLLYDAIDESNGF---YVCPV--EKSV--------RSLMNVPFTLGGS-ELEAEFVKEAAKAGMVQ 327 (365)
T ss_pred HHHHHHHHhCCCc---ccCCC--ChHH--------hCCeEEEEEcCCc-hhHHHHHHHHHHCCCcc
Confidence 8888888876544 11211 1111 1345789999764 47788999998777543
No 370
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.16 E-value=4.9e-09 Score=111.09 Aligned_cols=210 Identities=19% Similarity=0.226 Sum_probs=130.2
Q ss_pred hHHHHHHHHHHHhCCCcE--EEeCCHH---HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCH
Q 009167 211 TTVVVEEKMSALEGAEST--VIMASGM---SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e~~--i~~sSGs---~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~ 285 (541)
..-+++..|+++.|.+-+ =+...++ +|+.++.+.--+.+++|+++...|+.+...++..+...|+++..++..+-
T Consensus 111 ~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~ 190 (429)
T PF02347_consen 111 ALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDED 190 (429)
T ss_dssp HHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTT
T ss_pred HHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEeccccc
Confidence 345779999999998632 3344444 45555554433445699999999999988888888889999988875421
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCC--CCCCCcccccccCCcEEEECCccccCCC-
Q 009167 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT--FATPLNQKALSLGADLVLHSATKFIGGH- 362 (541)
Q Consensus 286 e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea--~a~~~~~~~~~~gaDivv~S~sK~lgg~- 362 (541)
.... .+ ++.+|++++|| -.|.+-|+++|++++|++|+++++ .+ -+......|-++|+||++.+ +|.||-+
T Consensus 191 ~~~d---~~-~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~ 263 (429)
T PF02347_consen 191 GTTD---DD-DTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPM 263 (429)
T ss_dssp CSB----ST-TEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---
T ss_pred CCcc---cc-CeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccC
Confidence 1111 34 59999999998 589999999999999999999987 55 22345567889999999877 7776522
Q ss_pred --CCceEEEEEeChHHHHHHHH-------------------------Hhh-----hcCCC--ch--HHHHHHHHHhHHHH
Q 009167 363 --NDVLAGSISGSGKLVTQIRN-------------------------LHH-----VLGGA--LN--PNAAYLIIRGMKTL 406 (541)
Q Consensus 363 --gd~~gG~lv~~~~li~~l~~-------------------------~~~-----~~G~~--~s--~~~a~l~l~~l~tl 406 (541)
|+.-.|++..+++++.++-. .++ ..++. +. ....|+++.|-+-+
T Consensus 264 ~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL 343 (429)
T PF02347_consen 264 GFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGL 343 (429)
T ss_dssp CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHH
Confidence 22236888887766544321 001 01111 11 12245555555566
Q ss_pred HHHHHHHHHHHHHHHHHHHhC
Q 009167 407 HLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 407 ~~r~~~~~~~a~~la~~L~~~ 427 (541)
..-.++...++.++++.|.+.
T Consensus 344 ~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 344 REIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 666667778899999999875
No 371
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.14 E-value=7.8e-09 Score=106.38 Aligned_cols=220 Identities=19% Similarity=0.203 Sum_probs=142.9
Q ss_pred CCccCCCCchhHHHHHHHHHHHh---CCCcEEEeCCHHHHHHHHHHHhccC------CC--EEEEcCCCCcc-hHHHHHh
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVPA------GG--HIVTTTDCYRK-TRIFIET 268 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~---g~e~~i~~sSGs~Ai~~al~all~p------Gd--~Vlv~~~~y~~-~~~~~~~ 268 (541)
+|..+-+-.-..-.+++.|.+.. ..+.+.+.+||++|+..+|..-.+. -+ .+|....+|++ +..++..
T Consensus 89 ~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~ 168 (433)
T KOG1401|consen 89 GHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSV 168 (433)
T ss_pred eeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHh
Confidence 34444443333667888888887 4578899999999999998743221 12 38888888887 3333321
Q ss_pred -hcccCCe-------EEEEeCCCCHHHHHHhccCC--CceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCC
Q 009167 269 -VLPKMGI-------TATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 269 -~l~~~Gi-------~v~~vd~~d~e~Le~al~~~--~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea 334 (541)
.-..++. ++.....+|..++++.++.+ .+.+|++|......|.+.. +..|.++|+++|+++|.||+
T Consensus 169 ~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV 248 (433)
T KOG1401|consen 169 TGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEV 248 (433)
T ss_pred hcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehh
Confidence 1122232 34444567899999999764 3789999999977777664 66899999999999999999
Q ss_pred CCCCC------cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-hcCCCc--hHHHHHHHHHhHHH
Q 009167 335 FATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGAL--NPNAAYLIIRGMKT 405 (541)
Q Consensus 335 ~a~~~------~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G~~~--s~~~a~l~l~~l~t 405 (541)
+.... .+..+..-.||.+ +.|.++|+ +..|+..+++++.+.+..-.. ..|.+. +|+++..+...+++
T Consensus 249 ~tG~gR~g~~~a~e~~~~~PDI~t--~aK~L~gG--lPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~ 324 (433)
T KOG1401|consen 249 QTGLGRLGYGWAQEYFGVTPDITT--VAKPLGGG--LPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDE 324 (433)
T ss_pred hhCccccchHHHHHHhCcCCccee--ehhhccCC--ceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHH
Confidence 65311 1223334467776 89999876 578888899998888764222 234332 46666666666665
Q ss_pred HH--HHHHHHHHHHHHHHHHH
Q 009167 406 LH--LRVQQQNSTALRMAKIL 424 (541)
Q Consensus 406 l~--~r~~~~~~~a~~la~~L 424 (541)
+. ...++..+.-+.|.+.|
T Consensus 325 l~~~e~~k~vs~~~k~L~~~l 345 (433)
T KOG1401|consen 325 LKDPETLKNVSKIGKELRKLL 345 (433)
T ss_pred HcCHHHHHHHHHHHHHHHHHH
Confidence 42 23333333334444433
No 372
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.00 E-value=1.1e-06 Score=97.91 Aligned_cols=219 Identities=14% Similarity=0.045 Sum_probs=136.9
Q ss_pred ccCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc--c-------C-----------------------
Q 009167 203 EYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV--P-------A----------------------- 248 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all--~-------p----------------------- 248 (541)
..+......-+++-+.+++++|.+ ...++++|+.|+..++...- + .
T Consensus 116 e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~ 195 (608)
T TIGR03811 116 ESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIM 195 (608)
T ss_pred ccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccccc
Confidence 333333334445566778888863 47889999988877664321 0 0
Q ss_pred --------------------C------CEEEEcCCCCcchHHHHHhhcccCCe---EEEEeCC-----CCHHHHHHhccC
Q 009167 249 --------------------G------GHIVTTTDCYRKTRIFIETVLPKMGI---TATVIDP-----ADMEGLEAALNN 294 (541)
Q Consensus 249 --------------------G------d~Vlv~~~~y~~~~~~~~~~l~~~Gi---~v~~vd~-----~d~e~Le~al~~ 294 (541)
| -.++++...|.+..... ..+|+ .++.++. .|+++|++.|++
T Consensus 196 ~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa----~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~ 271 (608)
T TIGR03811 196 DLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAA----DIIGIGLDQVIPVPVDSNYRMDINELEKIIRK 271 (608)
T ss_pred ccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHH----HHcCCCcccEEEeecCCCCcCCHHHHHHHHHH
Confidence 0 05777777787755433 33344 2444442 388999888752
Q ss_pred ----C-CceEEEEeCCCCCCCccccHHHHHHHH---HhCCC--EEEEeCCCCCCC---ccc------c------------
Q 009167 295 ----N-NVSLFFTESPTNPFLRCVDVKLVSDLC---HKKGA--IVCIDGTFATPL---NQK------A------------ 343 (541)
Q Consensus 295 ----~-~tklV~lesP~NPtG~i~dl~~Ia~la---~~~gi--~lIvDea~a~~~---~~~------~------------ 343 (541)
+ .+-+|+....+-.+|.+-|+++|+++| +++|+ +++||++|+... ..+ |
T Consensus 272 ~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~ 351 (608)
T TIGR03811 272 LAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYG 351 (608)
T ss_pred HHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhccccccc
Confidence 1 244566667778899999999999998 67887 699999988642 111 0
Q ss_pred ----------------c--ccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHH---Hhh--------------hc
Q 009167 344 ----------------L--SLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRN---LHH--------------VL 387 (541)
Q Consensus 344 ----------------~--~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~---~~~--------------~~ 387 (541)
+ -..+|-++..+||++.-+- .+|+++. ++.+.+.+.. +.. ..
T Consensus 352 ~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py--~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~le 429 (608)
T TIGR03811 352 VFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPY--SAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILE 429 (608)
T ss_pred ccccccccccHhHHHHHhcCcCceEEEeCcccccccCC--CeEEEEEeCHHHHHHHhcCcchhccccccCccccccccee
Confidence 0 0258999999999977554 2565544 4444333321 110 11
Q ss_pred CCCch--HHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 388 GGALN--PNAAYLIIRGM----KTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 388 G~~~s--~~~a~l~l~~l----~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
|...+ ....|+.++.+ +-+...+++..++++++.+.|+++
T Consensus 430 gSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 430 GSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred cCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22222 45566666544 356777888889999999999874
No 373
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.95 E-value=3.8e-07 Score=95.67 Aligned_cols=241 Identities=12% Similarity=0.032 Sum_probs=142.8
Q ss_pred hHHHHHHHHHHHhCCC---cEEEeC-CHHHHHHHHHHHhccCCCEEE-EcCCCCcchHHHHHhhcccCCeEEEEeC----
Q 009167 211 TTVVVEEKMSALEGAE---STVIMA-SGMSASTVMLLALVPAGGHIV-TTTDCYRKTRIFIETVLPKMGITATVID---- 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e---~~i~~s-SGs~Ai~~al~all~pGd~Vl-v~~~~y~~~~~~~~~~l~~~Gi~v~~vd---- 281 (541)
..++.++.|.++++.+ ++++++ ||+.++.++...++.+||+++ +....+.+.. +. ..++++| ++..+.
T Consensus 50 i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r-~~-~ea~~~g-~v~~~~~~~~ 126 (364)
T PRK12462 50 LLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRK-AI-GEASRVA-AMRVVWDGAA 126 (364)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHH-HH-HHHHhcC-CceEecCcCC
Confidence 4567788888899862 355555 467999999999999999654 3334444432 22 3455565 344332
Q ss_pred -----CCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEEECC
Q 009167 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 355 (541)
Q Consensus 282 -----~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv~S~ 355 (541)
..+++++ .+.+ +.+.|++++-.-.+|...| ++.+.+++++|+|.+-..+ .+.+..++ |+++.+.
T Consensus 127 ~~~~~~p~~~~~--~~~~-d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~--dvi~ags 196 (364)
T PRK12462 127 SGYRTLPSLAEL--DWDA-RAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAY--GMVYAHA 196 (364)
T ss_pred CCCCcCCCHHHh--ccCC-CCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHHc--cEEEeec
Confidence 1134443 2233 3677777554455788876 3333468999999984332 22333333 9999999
Q ss_pred ccccCCCCCceEEEEEeChHHHHHHHHHh----------h--hcCCCchHHHHHHHHHhHHHH-------HHHHHHHHHH
Q 009167 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLH----------H--VLGGALNPNAAYLIIRGMKTL-------HLRVQQQNST 416 (541)
Q Consensus 356 sK~lgg~gd~~gG~lv~~~~li~~l~~~~----------~--~~G~~~s~~~a~l~l~~l~tl-------~~r~~~~~~~ 416 (541)
.|.+|++| .++++.+++++++..... . ..-.+++....|++...++.+ +.+.+++.+.
T Consensus 197 QKnlgP~G---ltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~k 273 (364)
T PRK12462 197 QKNLGPAG---VTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARK 273 (364)
T ss_pred cccCCCCc---eEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999776 567888887776543210 0 111244445555544444443 3345666677
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCe
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI 481 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~i 481 (541)
++.+.+++.+.++. |+.. -.+.+ + .--.+.|.+.+ .+...+|+...+..|+
T Consensus 274 a~~ly~~id~~~~~----~~~~-~~~~~-------R-S~mnv~f~~~~-~~l~~~f~~~a~~~gl 324 (364)
T PRK12462 274 AAMLYATLDALNEV----IDCH-AHRAA-------R-STMNVAFRFRQ-PRLDTLFKEQSTEAGF 324 (364)
T ss_pred HHHHHHHHHhCCCc----ccCC-CChhh-------c-CcceEEEEcCC-HHHHHHHHHHHHHCCC
Confidence 88888888876532 2211 11111 1 11246777763 4567888888877664
No 374
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.88 E-value=2.7e-07 Score=105.82 Aligned_cols=157 Identities=16% Similarity=0.223 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHhCCC--cEEEeCCHH---HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHH
Q 009167 212 TVVVEEKMSALEGAE--STVIMASGM---SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (541)
Q Consensus 212 ~~~Le~~LA~l~g~e--~~i~~sSGs---~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e 286 (541)
.-+++..|++|.|.+ .+=++-.++ ||+.++.+..-....+|++++..|+.+...++..++..|++++. +
T Consensus 126 l~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~ 199 (954)
T PRK12566 126 LLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------D 199 (954)
T ss_pred HHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------c
Confidence 346789999999986 445555555 34444433221224689999999999999998889999999875 3
Q ss_pred HHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCC--CCCCCcccccccCCcEEEECCcc-----cc
Q 009167 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT--FATPLNQKALSLGADLVLHSATK-----FI 359 (541)
Q Consensus 287 ~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea--~a~~~~~~~~~~gaDivv~S~sK-----~l 359 (541)
++++.+.+ ++..|++.+|| -.|.+.|+++|.+++|++|+++|+ .+ .+..+...|-++|+||++.+..- .|
T Consensus 200 ~~~~~~~~-~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~~-~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~ 276 (954)
T PRK12566 200 AVDNLAAH-AVFGALLQYPD-THGEIRDLRPLIDQLHGQQALACV-AADLLSLLVLTPPGELGADVVLGSTQRFGVPMGY 276 (954)
T ss_pred chhhcCCC-CEEEEEEECCC-CceEEccHHHHHHHHHHcCCEEEE-EeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCC
Confidence 34455555 48999999997 689999999999999999998664 33 22345567889999999986542 34
Q ss_pred CCCCCceEEEEEeChHHHHHH
Q 009167 360 GGHNDVLAGSISGSGKLVTQI 380 (541)
Q Consensus 360 gg~gd~~gG~lv~~~~li~~l 380 (541)
||+. +|++..++++..++
T Consensus 277 GGP~---ag~~a~~~~~~R~~ 294 (954)
T PRK12566 277 GGPH---AAYFACRDDYKRAM 294 (954)
T ss_pred CCCC---eeeeeehHHHHhhC
Confidence 4443 78888877655443
No 375
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.88 E-value=4.8e-07 Score=91.97 Aligned_cols=255 Identities=18% Similarity=0.152 Sum_probs=151.3
Q ss_pred CCCccCCC--CchhHHHHHHH----HHHHhCCC---c--EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHH-HH
Q 009167 200 ASFEYGRY--GNPTTVVVEEK----MSALEGAE---S--TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIF-IE 267 (541)
Q Consensus 200 ~~~~Y~R~--~~p~~~~Le~~----LA~l~g~e---~--~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~-~~ 267 (541)
.+|.-.|| +|...+++|.. --+.++.+ + .+-.-||+.|+..+..++++|+|+|.--+.-+++...- +.
T Consensus 70 EGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~ 149 (477)
T KOG2467|consen 70 EGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQ 149 (477)
T ss_pred cCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccc
Confidence 45555554 56666555332 22344542 2 34445999999999999999999998777666652210 00
Q ss_pred hhcccCCeEEEEe-------CC----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCC
Q 009167 268 TVLPKMGITATVI-------DP----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 268 ~~l~~~Gi~v~~v-------d~----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a 336 (541)
.--++....-+++ ++ .|-|.||+.....++|+|+.-. +-.-+.+|.+++.++|.+.|+.+++|-++.
T Consensus 150 T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~--SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHI 227 (477)
T KOG2467|consen 150 TPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGT--SAYSRLIDYARFRKIADKVGAYLMADMAHI 227 (477)
T ss_pred cCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEecc--ccchhhccHHHHHHHHHhcCceeehhhhhH
Confidence 1011111112222 21 2778888766555678887632 235677899999999999999999999854
Q ss_pred C-----CCcccccccCCcEEEECCccccCCCCCceEEEEEeCh---------------HHHHHHHH--HhhhcCCCc---
Q 009167 337 T-----PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG---------------KLVTQIRN--LHHVLGGAL--- 391 (541)
Q Consensus 337 ~-----~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~---------------~li~~l~~--~~~~~G~~~--- 391 (541)
. .+..+|+++ +|||+.+.||.+-|+. ||++.-++ ++-+++.. +....|+--
T Consensus 228 SgLVAA~vipsPFey-~DiVTTTTHKsLRGPR---g~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNht 303 (477)
T KOG2467|consen 228 SGLVAAGVIPSPFEY-CDIVTTTTHKSLRGPR---GAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHT 303 (477)
T ss_pred HHHHhcccCCCcccc-cceeeccccccccCCc---ceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcch
Confidence 3 445677776 9999999999999885 77776432 12233321 111222211
Q ss_pred -hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC---CHH
Q 009167 392 -NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLT 467 (541)
Q Consensus 392 -s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~---~~~ 467 (541)
..++.++-...-....+..++..+|++.+++.|.++.. ++.--|-.. .++-++|.+ +..
T Consensus 304 IaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy--~lvtgGTDn---------------HlvLvDLr~~G~dGa 366 (477)
T KOG2467|consen 304 IAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRGY--KLVTGGTDN---------------HLVLVDLRPKGVDGA 366 (477)
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcCc--eEecCCccc---------------eEEEEeccccCCchH
Confidence 11222211112223556677888999999999987532 111112111 266677653 235
Q ss_pred HHHHHHHHcc
Q 009167 468 ATIKFIDALK 477 (541)
Q Consensus 468 ~~~~~l~~L~ 477 (541)
.++++++.+.
T Consensus 367 rvE~vle~~~ 376 (477)
T KOG2467|consen 367 RVEKVLELCH 376 (477)
T ss_pred HHHHHHHHhh
Confidence 6777777664
No 376
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.85 E-value=2e-06 Score=88.44 Aligned_cols=214 Identities=17% Similarity=0.127 Sum_probs=131.4
Q ss_pred hhHHHHHHHHHHHh-CCC---------cEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcccCCeEE
Q 009167 210 PTTVVVEEKMSALE-GAE---------STVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (541)
Q Consensus 210 p~~~~Le~~LA~l~-g~e---------~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v 277 (541)
.....+.+.++++. |.+ ..+-+.+|+.|+..+..-+ ..+...|.+++|+|+..... +...|.++
T Consensus 69 ~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~I----f~~aGl~v 144 (396)
T COG1448 69 EGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAI----FEAAGLEV 144 (396)
T ss_pred CCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHH----HHhcCCce
Confidence 34567777777765 432 2456778998888776544 45666799999999886544 44457766
Q ss_pred EEeC---C----CCHHHHHHhccCC-CceEEEE-eCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCC---CCCccc
Q 009167 278 TVID---P----ADMEGLEAALNNN-NVSLFFT-ESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFA---TPLNQK 342 (541)
Q Consensus 278 ~~vd---~----~d~e~Le~al~~~-~tklV~l-esP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a---~~~~~~ 342 (541)
...+ . .|.+.+.+.|++- +..+|++ ..-+||||.-+. .++|.++.+++|.+.++|=+|- .++..+
T Consensus 145 ~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeD 224 (396)
T COG1448 145 ETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEED 224 (396)
T ss_pred eeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHH
Confidence 5443 2 2666666655431 1345555 334699998876 5588888999999999999853 333222
Q ss_pred cc------ccCC-cEEEECCccccCCCCCceEEEEEe--ChHHHHHHH----HHhhhcCCCchHHHHHH----------H
Q 009167 343 AL------SLGA-DLVLHSATKFIGGHNDVLAGSISG--SGKLVTQIR----NLHHVLGGALNPNAAYL----------I 399 (541)
Q Consensus 343 ~~------~~ga-Divv~S~sK~lgg~gd~~gG~lv~--~~~li~~l~----~~~~~~G~~~s~~~a~l----------~ 399 (541)
.. ..+. -+|+.|+||.||--|..+|++.+. +.+..+++. ...+..-..++..-+.+ -
T Consensus 225 a~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lr 304 (396)
T COG1448 225 AYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELR 304 (396)
T ss_pred HHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHH
Confidence 21 1122 488899999999888776765543 344444433 32222212222222211 1
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 400 IRGMKTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 400 l~~l~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
..+...+....+++.+.+..+.+.|+++
T Consensus 305 a~W~~El~~Mr~Ri~~mR~~lv~~L~~~ 332 (396)
T COG1448 305 AEWEQELEEMRQRILEMRQALVDALKAL 332 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2233445556667777788888888764
No 377
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.72 E-value=9e-07 Score=92.02 Aligned_cols=144 Identities=15% Similarity=0.236 Sum_probs=106.7
Q ss_pred hHHHHHHHHHHHhCCCcEEEe-CCHHHHHHH---HHHHh-ccCC----CEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALEGAESTVIM-ASGMSASTV---MLLAL-VPAG----GHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e~~i~~-sSGs~Ai~~---al~al-l~pG----d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+|++.|.++.|.+.+-+- ++|+++-.+ ++++. -..| +.+|+++..|+.... .+...|.+|+.|+
T Consensus 110 li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA----SAam~G~~VV~V~ 185 (496)
T COG1003 110 LIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA----SAAMAGFKVVVVK 185 (496)
T ss_pred HHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh----hHhhcCceEEEEe
Confidence 566889999999998765544 567654333 34433 2233 579999999987542 2344588888886
Q ss_pred CC-----CHHHHHHhccCCCceEEEEeCCCCCCCc-cccHHHHHHHHHhCCCEEEEeCCCCCC--CcccccccCCcEEEE
Q 009167 282 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLR-CVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVLH 353 (541)
Q Consensus 282 ~~-----d~e~Le~al~~~~tklV~lesP~NPtG~-i~dl~~Ia~la~~~gi~lIvDea~a~~--~~~~~~~~gaDivv~ 353 (541)
.+ |+++|++++.+ ++.++.+++||. .|. -.+|.+|+++.|++|..|..|.+-.-. -..+|-+.|.|++=.
T Consensus 186 ~~~~G~VDlddLk~k~~~-~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~Hl 263 (496)
T COG1003 186 CDENGNVDLDDLRAKAED-NLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHL 263 (496)
T ss_pred cCCCCCccHHHHHHHhcc-ceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEe
Confidence 53 89999999987 599999988883 233 246999999999999999999983221 135788899999999
Q ss_pred CCccccC
Q 009167 354 SATKFIG 360 (541)
Q Consensus 354 S~sK~lg 360 (541)
-+||.|+
T Consensus 264 NLHKTF~ 270 (496)
T COG1003 264 NLHKTFC 270 (496)
T ss_pred ecccccc
Confidence 9999986
No 378
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.63 E-value=2.2e-06 Score=87.25 Aligned_cols=272 Identities=14% Similarity=0.128 Sum_probs=131.3
Q ss_pred hHHHHHHHHHHHh---CC----CcEEEeCCHH-HHHHHHHHHhccC--C----CEEEEcCCCCcchHHHHHhhcccCCeE
Q 009167 211 TTVVVEEKMSALE---GA----ESTVIMASGM-SASTVMLLALVPA--G----GHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 211 ~~~~Le~~LA~l~---g~----e~~i~~sSGs-~Ai~~al~all~p--G----d~Vlv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
...+|++.|-+|+ |- ..-|++++|+ +.+++++.+|... . -.|+...|-|...... ...+.....+
T Consensus 44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~q-t~~f~s~~y~ 122 (363)
T PF04864_consen 44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQ-TDFFDSRLYK 122 (363)
T ss_dssp S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHH-CCCT-BTTEE
T ss_pred ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHH-HHhccccCcc
Confidence 3446666666665 42 3578888887 8888888887543 1 2788888888764422 2334432222
Q ss_pred EEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc-ccccCCcEEEECC
Q 009167 277 ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK-ALSLGADLVLHSA 355 (541)
Q Consensus 277 v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~-~~~~gaDivv~S~ 355 (541)
..- |. ......-.. ..-+=++++||||.|.+-. .+++.-+..+|.|=+|.-|.... +....-||+++++
T Consensus 123 w~G-da---~~~~~~~~~-~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPhyTpI~~~aD~DiMLFT~ 192 (363)
T PF04864_consen 123 WAG-DA---SNFKNSDNP-SPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPHYTPITAPADHDIMLFTL 192 (363)
T ss_dssp EEE-EC---CCGTT-S-C-CGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S-B--SEEEEEH
T ss_pred ccc-cH---HhhccCCCC-CCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeecccccccCCCCCCceEEEEE
Confidence 211 11 111111111 2445677899999997632 12355567889999976543211 1123458999999
Q ss_pred ccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHHH--------------HHHHHHHHHHH
Q 009167 356 TKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLR--------------VQQQNSTALRM 420 (541)
Q Consensus 356 sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~r--------------~~~~~~~a~~l 420 (541)
||.-| |.+.+.||.+. ++++.++|..+.......++-..+.-++.-|+.+-.. .+...+..++|
T Consensus 193 SK~TG-HAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L 271 (363)
T PF04864_consen 193 SKLTG-HAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKL 271 (363)
T ss_dssp HHHCS--GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHH
T ss_pred ecccC-ccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHH
Confidence 99764 55556666555 5567788877655444444443333222222222111 11122333444
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhH-hhhccCcccEEEEEEcCC-HHHHHHHHHHccCcCeecccCCcccccccCccc
Q 009167 421 AKILEAHPKVKRVHYPGLKSHPEHHIA-TQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 421 a~~L~~~p~v~~v~~P~l~s~p~~~l~-~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
.+.+.+- .+..+|.+ .|+|.-+ ++.....+..-|+..+.. .+++..++.+.++.+ .-|.
T Consensus 272 ~~~~~~S---~rFSLq~~--~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~I~t---r~G~----------- 332 (363)
T PF04864_consen 272 RAAVSAS---KRFSLQKF--SPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAKIIT---RSGV----------- 332 (363)
T ss_dssp HHHHCCS---SSEEE-----SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTTEEE---EEGG-----------
T ss_pred HHHHHhc---CceecCcC--CchhccccccccCCCCCeEEEecCCcccccHHHHHHhCCccc---CCCC-----------
Confidence 4544432 22344443 2333322 222334677889988732 356778777655433 2232
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecC
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
.+|....++|||+-.
T Consensus 333 -----------~fga~~ryVRlSml~ 347 (363)
T PF04864_consen 333 -----------LFGADSRYVRLSMLK 347 (363)
T ss_dssp -----------GGTS-TTEEEEESSS
T ss_pred -----------ccCCCCCeEEEeccC
Confidence 245567899999864
No 379
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.59 E-value=2.3e-05 Score=80.57 Aligned_cols=165 Identities=18% Similarity=0.272 Sum_probs=105.7
Q ss_pred ccCCCC-chhHHHHHHHHHHHh----CC---CcEEEeCCHH-HHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHhhccc
Q 009167 203 EYGRYG-NPTTVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 203 ~Y~R~~-~p~~~~Le~~LA~l~----g~---e~~i~~sSGs-~Ai~~al~all-~pGd~Vlv~~~~y~~~~~~~~~~l~~ 272 (541)
.-|-|. ...+.-+|+.+|++. |. .+-|++|+|. .|+..++..++ .+++-|+++-|-|+-.-..+. .+.
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~-l~~- 182 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATIS-LLG- 182 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHH-HhC-
Confidence 344443 345667788888776 32 1346666665 88888887764 567899999998875332221 121
Q ss_pred CCeEEEE-eCC-----CCHHHHHHhccC----CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCC
Q 009167 273 MGITATV-IDP-----ADMEGLEAALNN----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 273 ~Gi~v~~-vd~-----~d~e~Le~al~~----~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~ 339 (541)
+..|.+ .|. .|.++|++.+++ -+++++++-+|.||||.++. +++|..+|+++|+.|+.||+|-..+
T Consensus 183 -~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nv 261 (475)
T KOG0258|consen 183 -GTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNV 261 (475)
T ss_pred -CcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhc
Confidence 122222 232 377777766542 25788888899999999986 7799999999999999999954322
Q ss_pred ccc---------cc-ccC---C----cEEEECCccccCCCCCceEEEE
Q 009167 340 NQK---------AL-SLG---A----DLVLHSATKFIGGHNDVLAGSI 370 (541)
Q Consensus 340 ~~~---------~~-~~g---a----Divv~S~sK~lgg~gd~~gG~l 370 (541)
... .+ ++| . -+..+|.||.+.|--+..+|++
T Consensus 262 y~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYm 309 (475)
T KOG0258|consen 262 YTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYM 309 (475)
T ss_pred cCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCee
Confidence 111 01 111 2 1557889998776544557765
No 380
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.56 E-value=1e-05 Score=84.89 Aligned_cols=265 Identities=15% Similarity=0.233 Sum_probs=152.9
Q ss_pred HHHHhcccCCCccCCCCchhHHHHHHHHHHH----hCC-----------CcEEEeCCHHHHHHHHHHHh-------ccCC
Q 009167 192 IDFKEKRRASFEYGRYGNPTTVVVEEKMSAL----EGA-----------ESTVIMASGMSASTVMLLAL-------VPAG 249 (541)
Q Consensus 192 ~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l----~g~-----------e~~i~~sSGs~Ai~~al~al-------l~pG 249 (541)
.+...+..+...++....|...+||..+-++ ++- ...++.+|.+++...++.+- .+.+
T Consensus 91 admLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~ 170 (511)
T KOG0628|consen 91 ADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSR 170 (511)
T ss_pred HHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcC
Confidence 3444444455667777899999998555444 331 24688888888777766542 2222
Q ss_pred -----------C-EEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-----CHHHHHHhccCC----CceEEEEeCCCCC
Q 009167 250 -----------G-HIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNN----NVSLFFTESPTNP 308 (541)
Q Consensus 250 -----------d-~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~----~tklV~lesP~NP 308 (541)
+ .+.+++..|.+.. ...-..+++.+.++.+ +.+.|+++|.++ -+-.+++-+.. -
T Consensus 171 ~p~~~e~~~~~~lV~Y~SDqahssve----ka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G-T 245 (511)
T KOG0628|consen 171 PPELHESSVLARLVAYCSDQAHSSVE----KACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLG-T 245 (511)
T ss_pred CCcccchhhhhhheEEecCcccchHH----HhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeec-C
Confidence 2 2445566666643 2222335666666533 577788877643 12333332322 3
Q ss_pred CCcc--ccHHHHHHHHHhCCCEEEEeCCCCCCCcc----cccccC---CcEEEECCccccCCCCCceEEEEE--------
Q 009167 309 FLRC--VDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLG---ADLVLHSATKFIGGHNDVLAGSIS-------- 371 (541)
Q Consensus 309 tG~i--~dl~~Ia~la~~~gi~lIvDea~a~~~~~----~~~~~g---aDivv~S~sK~lgg~gd~~gG~lv-------- 371 (541)
|+.+ -++.+|..+|+++|++|+||++|+..... +.+-.| +|-+-+-.||++--+-|.-.=|+-
T Consensus 246 T~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~ 325 (511)
T KOG0628|consen 246 TSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRA 325 (511)
T ss_pred ccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeee
Confidence 4444 36999999999999999999999864332 222223 466667778887544332111111
Q ss_pred --eChHHHHH--------HHHHhhhcCCCchHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCC
Q 009167 372 --GSGKLVTQ--------IRNLHHVLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLK 439 (541)
Q Consensus 372 --~~~~li~~--------l~~~~~~~G~~~s~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~ 439 (541)
.++...+. ++.+...+|-..-.+-.|..+| +.+.++.+++++.+.++.+-+.+.+.+.-+-+.-.
T Consensus 326 ~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~--- 402 (511)
T KOG0628|consen 326 FNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKR--- 402 (511)
T ss_pred eecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccc---
Confidence 11111110 1111222333333455566555 55778888888877777777666655433222111
Q ss_pred CCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccC
Q 009167 440 SHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI 478 (541)
Q Consensus 440 s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~ 478 (541)
.=+++.|.+++..+..++|++++..
T Consensus 403 --------------~lgLvcFRlk~~N~~ne~Ll~~in~ 427 (511)
T KOG0628|consen 403 --------------ILGLVCFRLKGDNEINEALLNRLNS 427 (511)
T ss_pred --------------ccceeEEeecCCcHHHHHHHHHHHh
Confidence 2358999999877788889988864
No 381
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.42 E-value=4.9e-06 Score=82.70 Aligned_cols=291 Identities=15% Similarity=0.195 Sum_probs=162.6
Q ss_pred CCCCchhHHHH-HHHHHHHhCCCcEEEeCCHHHHHHHHHHH---hccCCCEEEEcCCCCcchHHHHHhh----cc-cCCe
Q 009167 205 GRYGNPTTVVV-EEKMSALEGAESTVIMASGMSASTVMLLA---LVPAGGHIVTTTDCYRKTRIFIETV----LP-KMGI 275 (541)
Q Consensus 205 ~R~~~p~~~~L-e~~LA~l~g~e~~i~~sSGs~Ai~~al~a---ll~pGd~Vlv~~~~y~~~~~~~~~~----l~-~~Gi 275 (541)
.|+-.....+. ++..+.+-+..-+++++||++|+.++|+. +.+-.| ||+-+..|++.....-.+ +. .-++
T Consensus 81 ~RFlhd~lv~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v 159 (452)
T KOG1403|consen 81 NRFLHDELVQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGV 159 (452)
T ss_pred chhhHHHHHHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCc-eEEEechhccceeeeeeccceeccCCCCc
Confidence 44433333333 33334444446788999999999999874 334444 555566777633211010 00 0011
Q ss_pred ---EEEEe-CC---------------CC-----HHHHHHhcc----C-CCceEEEEeCCCCCCCcccc----HHHHHHHH
Q 009167 276 ---TATVI-DP---------------AD-----MEGLEAALN----N-NNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 276 ---~v~~v-d~---------------~d-----~e~Le~al~----~-~~tklV~lesP~NPtG~i~d----l~~Ia~la 322 (541)
+...+ +. .| .+.+++.++ . ..+.+.+.|+..+=.|.++| .+++++..
T Consensus 160 ~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~V 239 (452)
T KOG1403|consen 160 AKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAV 239 (452)
T ss_pred CCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHH
Confidence 11111 10 01 123333332 1 13667777888877888887 66889999
Q ss_pred HhCCCEEEEeCCCCCC-------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH----HhhhcCCCc
Q 009167 323 HKKGAIVCIDGTFATP-------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN----LHHVLGGAL 391 (541)
Q Consensus 323 ~~~gi~lIvDea~a~~-------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~----~~~~~G~~~ 391 (541)
+.+|-+.|.||++..+ +.......-.|||+ +.|-+|-+- ..+.++..+++.+.+.. +.+.+|+
T Consensus 240 r~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVt--mgKpmGNGh--PVa~VattkeIA~Af~atgv~YFNTyGG-- 313 (452)
T KOG1403|consen 240 RSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVT--MGKPMGNGH--PVAAVATTKEIAQAFHATGVEYFNTYGG-- 313 (452)
T ss_pred hcCCCeEEeehhhhcccccchhhhhhhhhccccchhe--ecccCCCCC--eeeEEeccHHHHHHhccccceehhccCC--
Confidence 9999999999995431 11222234467877 889877332 46788888888887764 3345665
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-------
Q 009167 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG------- 464 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~------- 464 (541)
+|..++..+..++.++ -+..++++..+.++|...-.-.+..++.+ .+.+|.|.++.++|-.
T Consensus 314 nPVsCAv~laVm~v~e--~E~Lq~ha~~vG~~L~~lL~~~k~kh~~I----------GDvRGvGLFiGIdLVkD~~tRtP 381 (452)
T KOG1403|consen 314 NPVSCAVGLAVMRVCE--DENLQEHAQQVGEKLEVLLRRLKQKHECI----------GDVRGVGLFIGIDLVKDRKTRTP 381 (452)
T ss_pred CchhHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHhhhccce----------eccccceEEEeeeeecccccCCC
Confidence 4666666655555433 23445556666655543211001122211 1236778888998742
Q ss_pred CHHHHHHHHHHccCc-CeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEE----EEecCCCHHHHHHHHHHHHh
Q 009167 465 DLTATIKFIDALKIP-YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR----FSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 465 ~~~~~~~~l~~L~~~-~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IR----lSvG~e~~edli~dL~~AL~ 539 (541)
+.+.+..++.+|+.. ++-+|.-|.. ++.+. +++..|+.++.+..|++.|.
T Consensus 382 ~tk~A~~~v~rlke~y~VLlsaDGPh-------------------------~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 382 DTKEAHWVVNRLKELYRVLLSADGPH-------------------------RNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred cHHHHHHHHHHHHHhhhEEEecCCCC-------------------------CceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 235566777777643 3444433321 12222 45677888777777777664
No 382
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.41 E-value=1.5e-05 Score=83.74 Aligned_cols=279 Identities=16% Similarity=0.152 Sum_probs=161.0
Q ss_pred HHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHh---cc--CC---CEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 214 VVEEKMSALEGAES---TVIMASGMSASTVMLLAL---VP--AG---GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 214 ~Le~~LA~l~g~e~---~i~~sSGs~Ai~~al~al---l~--pG---d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
+.-..++.++++.. ...+++|++++.++.... .+ .| -.++++...| ..++.....++++++.++.
T Consensus 124 ~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~----~a~eK~a~yf~v~l~~V~~ 199 (491)
T KOG1383|consen 124 ECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVH----AAFEKAARYFEVELREVPL 199 (491)
T ss_pred HHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHH----HHHHHHHhhEEEEEEeeec
Confidence 33445667777642 234556678755554322 11 12 2455544433 3355666667788777764
Q ss_pred C------CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHh-CCCEEEEeCCCCCCCcc----c--cccc---
Q 009167 283 A------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQ----K--ALSL--- 346 (541)
Q Consensus 283 ~------d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~-~gi~lIvDea~a~~~~~----~--~~~~--- 346 (541)
+ |+..+.+.+++ +|.+|+.+.|+-|+|.+-|+++|.++.-+ +++++++|.+-+.++.. . +.+.
T Consensus 200 ~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p 278 (491)
T KOG1383|consen 200 DEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVP 278 (491)
T ss_pred cccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCC
Confidence 3 89999999988 49999999999999999999999999988 99999999996654431 1 1122
Q ss_pred CCcEEEECCccccC-CCCCceEEEEE-eChHHH-HHHHHHhhhcC----------CCc--hHHHHHHHHH--hHHHHHHH
Q 009167 347 GADLVLHSATKFIG-GHNDVLAGSIS-GSGKLV-TQIRNLHHVLG----------GAL--NPNAAYLIIR--GMKTLHLR 409 (541)
Q Consensus 347 gaDivv~S~sK~lg-g~gd~~gG~lv-~~~~li-~~l~~~~~~~G----------~~~--s~~~a~l~l~--~l~tl~~r 409 (541)
++.-+..+.|||-- +.| .|+++ .++++. .++.-.....| ... ....+|..+- |-+-....
T Consensus 279 ~V~Sisa~~HKYGl~~~G---~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~ 355 (491)
T KOG1383|consen 279 GVTSISADGHKYGLAPAG---SSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYREN 355 (491)
T ss_pred CceeEeeccceeeeeecC---cEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHH
Confidence 33345667899733 333 34444 444332 22211111111 111 1234554433 33445667
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHHHHccCcCeecccCCc
Q 009167 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
+++..++++.|.+.+++.+++.-+.-| .++|.+.+. .....++-+.|+.+|- .+..
T Consensus 356 ~~~ive~~~~l~egie~i~~i~i~gkp--------------------~vs~~~~~s~~~~i~elsd~l~~~GW--~lna- 412 (491)
T KOG1383|consen 356 TQNIVETARKLREGIENIKGIKIVGKP--------------------LVSFILFGSNDVNIFELSDLLRKKGW--ILNA- 412 (491)
T ss_pred HHHHHHHHHHHHHhhhccccceecCCC--------------------cEEEEEccCCccchhhhhHHHHhcCc--Cccc-
Confidence 788889999999999886555333222 355555432 2233444455544331 1110
Q ss_pred ccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 489 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
...|+. +--...|+.+..+=.++++.|+++++++|
T Consensus 413 ---lq~P~a---------------~Hi~vt~~~~~~~~A~~~v~Di~~~~~el 447 (491)
T KOG1383|consen 413 ---LQFPAA---------------IHICVTRVHAREDVADRFVADIRKVVEEL 447 (491)
T ss_pred ---cCCCCc---------------eEEEEEeeeccHHHHHHHHHHHHHHHHHH
Confidence 011221 11134555555444688999999998753
No 383
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.10 E-value=4.1e-05 Score=79.96 Aligned_cols=156 Identities=17% Similarity=0.229 Sum_probs=95.4
Q ss_pred HHhCC---CcEEEeCCHH-HHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC--------CCHH
Q 009167 221 ALEGA---ESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADME 286 (541)
Q Consensus 221 ~l~g~---e~~i~~sSGs-~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--------~d~e 286 (541)
+..|. ..+++++-.+ .++.+.+.++- ..++.|+.+...+.+.+..+ ...|.++..++. .|++
T Consensus 67 ~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai----~~AGl~~~vV~~~~~~d~l~td~~ 142 (389)
T PF05889_consen 67 RLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAI----ERAGLEPVVVENVLEGDELITDLE 142 (389)
T ss_dssp HHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHH----HHTT-EEEEE-EEEETTEEEEHHH
T ss_pred HHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHH----HhcCCeEEEeeccCCCCeeeccHH
Confidence 34464 4577775444 35666666653 45789999988887655333 334777666652 2577
Q ss_pred HHHHhccC--CCceEEEEeCCCCCCCcccc-HHHHHHHHHhCCCEEEEeCCCCCCCc------ccccccC-CcEEEECCc
Q 009167 287 GLEAALNN--NNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG-ADLVLHSAT 356 (541)
Q Consensus 287 ~Le~al~~--~~tklV~lesP~NPtG~i~d-l~~Ia~la~~~gi~lIvDea~a~~~~------~~~~~~g-aDivv~S~s 356 (541)
.+++.+++ ....+.++.+++--.++..| +++|+++|++||++.++-++|+.... .+....| .|+++.|+-
T Consensus 143 ~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~d 222 (389)
T PF05889_consen 143 AIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTD 222 (389)
T ss_dssp HHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHH
T ss_pred HHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecC
Confidence 77777753 13578888888888889998 99999999999999999999986321 2223333 689999999
Q ss_pred cccCCCCCceEEEEEe-ChHHHHHHHH
Q 009167 357 KFIGGHNDVLAGSISG-SGKLVTQIRN 382 (541)
Q Consensus 357 K~lgg~gd~~gG~lv~-~~~li~~l~~ 382 (541)
|-|--+. .++.+.+ ++..+..+..
T Consensus 223 kNF~VPv--Ggai~As~~~~~i~~vs~ 247 (389)
T PF05889_consen 223 KNFMVPV--GGAIMASFDPSGILAVSK 247 (389)
T ss_dssp HHHCEES--SHEEEEESSHHHHHHHHH
T ss_pred CCEEecC--CCcEEEecCHHHHHHHHH
Confidence 8554221 1334444 3456666654
No 384
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.89 E-value=0.00018 Score=73.25 Aligned_cols=178 Identities=16% Similarity=0.258 Sum_probs=101.0
Q ss_pred HHHHHHhccC-----CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCC-CCc-------ccccccC
Q 009167 285 MEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT-PLN-------QKALSLG 347 (541)
Q Consensus 285 ~e~Le~al~~-----~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~-~~~-------~~~~~~g 347 (541)
++++|+.|.+ ..+.+|++|.++...|.-.- +..|.+++++||+.+||||++.. +.. .-.++..
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 5666766642 14789999999988886542 77999999999999999999543 111 1123445
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHH--HHHHHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVT--QIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE 425 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~--~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~ 425 (541)
+|+|+ |||-+- .||+.. +++++. ..+.+...+| .|.-..++...++.+. .+...+|.....+.|.
T Consensus 335 pD~vT--FSKK~q-----~gGffh-~~~frpn~pYrifNTWmG---dP~k~lll~~vv~~I~--~~~Ll~n~~~vG~~l~ 401 (484)
T KOG1405|consen 335 PDVVT--FSKKFQ-----TGGFFH-DEEFRPNEPYRIFNTWMG---DPSKNLLLEEVVQEIK--REDLLNNVAHVGKALL 401 (484)
T ss_pred cccee--hhhhhh-----cCcccc-CcccCCCchHHHhhhhcC---ChHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHH
Confidence 78888 667665 256544 333331 1222211122 2333333333333221 2233444444444432
Q ss_pred hC-CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCc
Q 009167 426 AH-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 426 ~~-p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
.. ..+ .-.||+. ....+|.|-++.++++.+ ..-.+|+..+++. |+..||+
T Consensus 402 ~gL~~L-q~~~p~~---------~~~~RGrGTF~a~d~ps~-~~Rdk~i~~~~~n--Gv~~GGC 452 (484)
T KOG1405|consen 402 KGLLEL-QAKYPGK---------INNLRGRGTFIAWDCPSG-SIRDKLILIARLN--GVNLGGC 452 (484)
T ss_pred HHHHHH-HHhCchh---------hhcccccceEEEEeCCCh-HHHHHHHHHHHHc--Cceeccc
Confidence 21 001 1234442 123478899999999864 4567788887764 4667765
No 385
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.77 E-value=0.0032 Score=63.32 Aligned_cols=161 Identities=16% Similarity=0.214 Sum_probs=114.3
Q ss_pred HHHHHHHHHhCC-Cc-EEEeCCHHHHHHHHHHHhccCCC---EEEEcCCCCcchHHHHHhhcccCCeEEE----EeCCC-
Q 009167 214 VVEEKMSALEGA-ES-TVIMASGMSASTVMLLALVPAGG---HIVTTTDCYRKTRIFIETVLPKMGITAT----VIDPA- 283 (541)
Q Consensus 214 ~Le~~LA~l~g~-e~-~i~~sSGs~Ai~~al~all~pGd---~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~----~vd~~- 283 (541)
..-..++.+.|+ +. +-+++|=+.-+..++.++.+|-. +|+...-.|++-+-.+...++..|+.+. .+.+.
T Consensus 115 ~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePRE 194 (465)
T KOG3846|consen 115 PILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPRE 194 (465)
T ss_pred hhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccc
Confidence 345567788888 33 44444545566777778888753 6889888888866666555666666432 12211
Q ss_pred -----CHHHHHHhccCC--CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEEECC
Q 009167 284 -----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 355 (541)
Q Consensus 284 -----d~e~Le~al~~~--~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv~S~ 355 (541)
..+++.+.|+.+ ...+|++...+--||...|+.+|...-+..|++|=.|=+++.+ ++....++|+|+.+...
T Consensus 195 GEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCS 274 (465)
T KOG3846|consen 195 GEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCS 274 (465)
T ss_pred cccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEee
Confidence 245555555432 4788999889999999999999997777789999999887753 45556688999999999
Q ss_pred ccccCCCCCceEEEEEeCh
Q 009167 356 TKFIGGHNDVLAGSISGSG 374 (541)
Q Consensus 356 sK~lgg~gd~~gG~lv~~~ 374 (541)
.||++.+.+-+||+.+-.+
T Consensus 275 YKYlnaGaGgIgGlFvHek 293 (465)
T KOG3846|consen 275 YKYLNAGAGGIGGLFVHEK 293 (465)
T ss_pred ecccccCCCccceeeeehh
Confidence 9999866555788777543
No 386
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.70 E-value=0.001 Score=72.49 Aligned_cols=145 Identities=17% Similarity=0.211 Sum_probs=99.8
Q ss_pred hHHHHHHHHHHHhCCCcE-EEeCCHHHH---HHHHHHHhc-cCCC----EEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALEGAEST-VIMASGMSA---STVMLLALV-PAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e~~-i~~sSGs~A---i~~al~all-~pGd----~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+|++.|.++.|.+.. +--+||.++ =..++++.+ ..|+ ..+++-..|+.... .+...|.+|..|+
T Consensus 583 lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA----SA~MagmkvvpV~ 658 (1001)
T KOG2040|consen 583 LFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA----SAAMAGMKVVPVG 658 (1001)
T ss_pred HHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh----hHHhcCCEEEEee
Confidence 456788889999998754 444677643 334455543 3443 35666667766442 2334577777776
Q ss_pred CC-----CHHHHHHhccCC--CceEEEEeCCCCCCCcc-ccHHHHHHHHHhCCCEEEEeCCCCC-C-CcccccccCCcEE
Q 009167 282 PA-----DMEGLEAALNNN--NVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFAT-P-LNQKALSLGADLV 351 (541)
Q Consensus 282 ~~-----d~e~Le~al~~~--~tklV~lesP~NPtG~i-~dl~~Ia~la~~~gi~lIvDea~a~-~-~~~~~~~~gaDiv 351 (541)
.+ |..+|++..+++ +..++.+..|+. .|.. ..+++++++.|+||--|..|.+-.- . -..+|-+.|+|+.
T Consensus 659 ~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~ 737 (1001)
T KOG2040|consen 659 CDANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVC 737 (1001)
T ss_pred ccCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccccccce
Confidence 43 777887766543 477888888883 3443 3599999999999999999998332 2 2367888999999
Q ss_pred EECCccccC
Q 009167 352 LHSATKFIG 360 (541)
Q Consensus 352 v~S~sK~lg 360 (541)
-.-+||.|+
T Consensus 738 HLNLHKTFc 746 (1001)
T KOG2040|consen 738 HLNLHKTFC 746 (1001)
T ss_pred eecccceee
Confidence 999999986
No 387
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.70 E-value=0.00083 Score=70.15 Aligned_cols=211 Identities=13% Similarity=0.131 Sum_probs=124.3
Q ss_pred HHHHHHhCC---CcEEEeCCHHHHHHHHHHHh-c--cC-----C-----C-EEEEcCCCCcchHHHHHhhcccCC---eE
Q 009167 217 EKMSALEGA---ESTVIMASGMSASTVMLLAL-V--PA-----G-----G-HIVTTTDCYRKTRIFIETVLPKMG---IT 276 (541)
Q Consensus 217 ~~LA~l~g~---e~~i~~sSGs~Ai~~al~al-l--~p-----G-----d-~Vlv~~~~y~~~~~~~~~~l~~~G---i~ 276 (541)
.++-++.|. .+.|+.++|+-++..++..- . -| | + .+.+++.+|.+..... ..+| -.
T Consensus 148 ~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaA----a~lg~gtd~ 223 (510)
T KOG0629|consen 148 AKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAA----AFLGLGTDH 223 (510)
T ss_pred HHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHH----HHhccCCce
Confidence 334444454 36899999985554444321 1 11 1 2 3455666777754332 2233 34
Q ss_pred EEEeCCC-----CHHHHHHhccCCC-----ceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccccc--
Q 009167 277 ATVIDPA-----DMEGLEAALNNNN-----VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL-- 344 (541)
Q Consensus 277 v~~vd~~-----d~e~Le~al~~~~-----tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~-- 344 (541)
++.|+.+ ++++||+.|-..+ +-+|-.+.-+...|..-|++.|+++|++|+.+++||++++.++.....
T Consensus 224 c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R 303 (510)
T KOG0629|consen 224 CIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHR 303 (510)
T ss_pred eEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhH
Confidence 5555543 6888888774321 233333333455688889999999999999999999999876543221
Q ss_pred --c---cCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHh---------------------hhcCCCchHHHHH
Q 009167 345 --S---LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLH---------------------HVLGGALNPNAAY 397 (541)
Q Consensus 345 --~---~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~---------------------~~~G~~~s~~~a~ 397 (541)
- ..+|-|.-+.||++|.+- -.+....+. .+.++..... ...|-....+-.|
T Consensus 304 ~kl~Giera~SvtwnpHK~~gapl--qCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlW 381 (510)
T KOG0629|consen 304 HKLTGIERANSVTWNPHKLMGAPL--QCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLW 381 (510)
T ss_pred hhccCccccCceeecHHHhhcCcc--hhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHH
Confidence 1 136788999999998553 233333322 2222221110 0122234456667
Q ss_pred HHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Q 009167 398 LIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (541)
Q Consensus 398 l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v 433 (541)
+..+ |..-++..+++..++++++.+.|++.+.-..+
T Consensus 382 lmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l 419 (510)
T KOG0629|consen 382 LMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEML 419 (510)
T ss_pred HHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceeh
Confidence 6654 44456777888888999999999887654433
No 388
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.55 E-value=0.011 Score=61.01 Aligned_cols=237 Identities=14% Similarity=0.098 Sum_probs=127.3
Q ss_pred hHHHHHHHHHHHhCCC---cEEEeCCH-HHHHHHHHHHhccCCCE--EEEcCCCCcchHHHHHhhcccCCeEEEEeC---
Q 009167 211 TTVVVEEKMSALEGAE---STVIMASG-MSASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e---~~i~~sSG-s~Ai~~al~all~pGd~--Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd--- 281 (541)
...+.++.+.++++.. +++++.+| +....++...|+..+.. |.+ -.|...- . ...+.++..+...+
T Consensus 51 v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~--g~Ws~~a--~-~eA~~~~~~~~~~~~~~ 125 (365)
T COG1932 51 VLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDT--GAWSEFA--I-KEAKKVGKQPKLIDARI 125 (365)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEee--eehhHhH--H-HHHHHhcccccccccce
Confidence 4567788899999873 35555555 47888888888866543 433 2232211 1 12222322111111
Q ss_pred ----C---CCHHHHHHhccCCCceEEEEeCCCCCCCcccc-HHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEE
Q 009167 282 ----P---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (541)
Q Consensus 282 ----~---~d~e~Le~al~~~~tklV~lesP~NPtG~i~d-l~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv 352 (541)
. .+++.+. +.+ +...|++++=..-+|.-++ ...+ .. +.++|+|.+-... ...+.. ..|++.
T Consensus 126 ~~~~~~~iP~~~~~~--~~~-~~ayv~~~~NeTi~Gv~v~~~p~~---~~--~~~~v~D~SS~ilsr~iDvs--k~dviy 195 (365)
T COG1932 126 EEAGYGSIPDLSKWD--FSD-NDAYVHFCWNETISGVEVPELPDI---GS--DGLLVADASSAILSRPIDVS--KYDVIY 195 (365)
T ss_pred eccCccCCCChhhcc--cCC-CccEEEEecCCcccceEccCCCCC---CC--CceEEEecccHHhcCCCChh--HcceEE
Confidence 1 1233222 222 2333555322223465554 1221 11 2789999873221 122222 358999
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHH--hh--------hcC---CCchHHHHHHHHHhHHHH------HHHHHHH
Q 009167 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HH--------VLG---GALNPNAAYLIIRGMKTL------HLRVQQQ 413 (541)
Q Consensus 353 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~--~~--------~~G---~~~s~~~a~l~l~~l~tl------~~r~~~~ 413 (541)
.+..|-+|+-| .++++.++++++++... .. ..| .+++.++-++....++++ +...++.
T Consensus 196 agaQKnlGpaG---ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn 272 (365)
T COG1932 196 AGAQKNLGPAG---LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARN 272 (365)
T ss_pred EehhhccCccc---eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99999999887 57888899888877542 10 111 334445545444444443 3344555
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcC
Q 009167 414 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 480 (541)
Q Consensus 414 ~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~ 480 (541)
.++++.|.+++.+.+.......|...| --.+.|.+. +.+....|+..+...+
T Consensus 273 ~~ka~~LY~~id~s~fy~~~v~~~~RS--------------~mnV~f~~~-~~~ld~~fv~eae~~g 324 (365)
T COG1932 273 QAKAQLLYDWIDKSDFYRNLVAKANRS--------------RMNVTFTLV-DAELDKGFVAEAEAAG 324 (365)
T ss_pred HHHHHHHHHHHHhCCccccccchhhcc--------------ceeEEEEcC-cHHHHHHHHHHHHHcC
Confidence 678888999998876543322222111 124677776 3455577887776655
No 389
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.49 E-value=0.022 Score=57.57 Aligned_cols=197 Identities=17% Similarity=0.170 Sum_probs=112.5
Q ss_pred CCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHh-CCC---------cEEEeCCHHHHHH
Q 009167 170 TDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALE-GAE---------STVIMASGMSAST 239 (541)
Q Consensus 170 ~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~-g~e---------~~i~~sSGs~Ai~ 239 (541)
..++.-|+..-....+.+. .+-.|+|--. -....+++.-+++. |.+ ..+-.-||+.|+.
T Consensus 45 g~PWvLPvVk~~e~~i~~d---------~s~NHEYLpi--~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~ 113 (410)
T KOG1412|consen 45 GKPWVLPVVKKAEKKIAND---------QSLNHEYLPI--LGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALR 113 (410)
T ss_pred CCeeEehhhhhhhhhccCc---------hhccchhccc--cCchhhhhhhHHHhcCCCchhhhhccccceeeccccchhh
Confidence 4567777765554444332 2234555422 12334555555543 331 1344568887776
Q ss_pred HHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcccCC----eEEEEeCC----CCHHHHHHhccCCCce-EEEEeC-CCC
Q 009167 240 VMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMG----ITATVIDP----ADMEGLEAALNNNNVS-LFFTES-PTN 307 (541)
Q Consensus 240 ~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l~~~G----i~v~~vd~----~d~e~Le~al~~~~tk-lV~les-P~N 307 (541)
.+..-+ .-+...|.++.|++......+ +..| .++.+.|. .|++.+...|+....+ ++++.. .+|
T Consensus 114 ~~A~Fl~~~~~~~~VY~SnPTW~nH~~if----~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhN 189 (410)
T KOG1412|consen 114 IAADFLATFYNKNTVYVSNPTWENHHAIF----EKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHN 189 (410)
T ss_pred hhHHHHHHhcccceeEecCCchhHHHHHH----HHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccC
Confidence 665432 223567999999998765443 4445 23445553 3777777666532233 333333 369
Q ss_pred CCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcccc----------cccCC-cEEEECCccccCCCCCceEEE--EE
Q 009167 308 PFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA----------LSLGA-DLVLHSATKFIGGHNDVLAGS--IS 371 (541)
Q Consensus 308 PtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~~----------~~~ga-Divv~S~sK~lgg~gd~~gG~--lv 371 (541)
|||.-.. ..+|++..++++...+.|-+|-.+...++ .+.|. -+++.||+|-+|-.+...|-+ ++
T Consensus 190 PTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~ 269 (410)
T KOG1412|consen 190 PTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVV 269 (410)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEe
Confidence 9997655 44788888889999999998644332222 12333 378899999998777655443 33
Q ss_pred eChHHHHHHH
Q 009167 372 GSGKLVTQIR 381 (541)
Q Consensus 372 ~~~~li~~l~ 381 (541)
-++..+..+.
T Consensus 270 ~n~a~i~~v~ 279 (410)
T KOG1412|consen 270 NNPAVIAGVK 279 (410)
T ss_pred cChhHHHHHH
Confidence 3455554443
No 390
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.46 E-value=0.017 Score=63.33 Aligned_cols=138 Identities=20% Similarity=0.347 Sum_probs=97.4
Q ss_pred HHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHh
Q 009167 215 VEEKMSALEGA--ESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAA 291 (541)
Q Consensus 215 Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~a 291 (541)
++..++++.|- ..+-++--|++|-++..++. ..++.++++...+|+.+...++...+.+|++++..+ +++....
T Consensus 168 yQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~---~~~~~~s 244 (1001)
T KOG2040|consen 168 YQTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD---IKEADYS 244 (1001)
T ss_pred hHHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecC---HHHhhcc
Confidence 35667777775 34556666775444433332 445667999999999999998888888898866543 4433322
Q ss_pred ccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCC-CCCCCcccccccCCcEEEECCccc
Q 009167 292 LNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATKF 358 (541)
Q Consensus 292 l~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea-~a~~~~~~~~~~gaDivv~S~sK~ 358 (541)
. + ++..|++.-|. --|.+.|..++++.+++.|.++++-.- .+.-+...|-++|+||++.|...+
T Consensus 245 ~-~-~v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRF 309 (1001)
T KOG2040|consen 245 S-K-DVSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRF 309 (1001)
T ss_pred c-c-ceeEEEEEcCC-CCCcccCHHHHHHHhhccCceEEEeehhhHHHccCChhhcCceeeecccccc
Confidence 2 3 38889998887 469999999999999999988765322 222334567789999999997765
No 391
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.15 E-value=0.014 Score=60.18 Aligned_cols=216 Identities=20% Similarity=0.182 Sum_probs=125.5
Q ss_pred ccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccC-----CCEEEEcCCCCcchHHHHHhhcccCCeEE
Q 009167 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA-----GGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~p-----Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v 277 (541)
.|+ ++.....|++.+-+.+|.+..+-+.-|-.|-+..+..++++ |...++.++.|..|.+.-.. ..|...
T Consensus 74 AYa--gsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~---~ng~~~ 148 (471)
T COG3033 74 AYA--GSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQ---INGATP 148 (471)
T ss_pred hhc--ccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHH---hcCCcc
Confidence 355 34567789999999999888888877876666666555554 55666777777765543222 222221
Q ss_pred EE--eC-------------CCCHHHHHHhccC---CCceEEEEeCCCCC-CCcccc---HHHHHHHHHhCCCEEEEeCC-
Q 009167 278 TV--ID-------------PADMEGLEAALNN---NNVSLFFTESPTNP-FLRCVD---VKLVSDLCHKKGAIVCIDGT- 334 (541)
Q Consensus 278 ~~--vd-------------~~d~e~Le~al~~---~~tklV~lesP~NP-tG~i~d---l~~Ia~la~~~gi~lIvDea- 334 (541)
+- ++ ..|++.|++.|++ +++-.|++.--+|- .|..+. ++++.++|++|+++++.|.+
T Consensus 149 ~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~R 228 (471)
T COG3033 149 RNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAAR 228 (471)
T ss_pred ccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhh
Confidence 11 11 1278999998864 24667776444554 355544 66999999999999999998
Q ss_pred CCCC-Ccc--ccc--------------ccCCcEEEECCccccCCCCCceEEEEEeChH----HHHHHHHHh------hhc
Q 009167 335 FATP-LNQ--KAL--------------SLGADLVLHSATKFIGGHNDVLAGSISGSGK----LVTQIRNLH------HVL 387 (541)
Q Consensus 335 ~a~~-~~~--~~~--------------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~----li~~l~~~~------~~~ 387 (541)
|+.. ++. +.. -.-+|-.+-|+-|---- -+||+++.+++ +...++... ..+
T Consensus 229 faENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lv---nmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tY 305 (471)
T COG3033 229 FAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLV---NMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTY 305 (471)
T ss_pred hhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccccee---ccccEEEecCccHHHHHHHHHhheEeecccccc
Confidence 4331 111 100 01257777787773211 15899988765 455554322 133
Q ss_pred CCCchHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHhC
Q 009167 388 GGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 388 G~~~s~~~a~l~l~~l~tl--~~r~~~~~~~a~~la~~L~~~ 427 (541)
|+..+-....+ ..+|+.- ...++...+..++|++.|++.
T Consensus 306 Ggl~Grdmeal-AvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~ 346 (471)
T COG3033 306 GGLAGRDMEAL-AVGLREGVNFDYLAHRVAQVQYLADGLEEA 346 (471)
T ss_pred CcccchhHHHH-HHHHHHhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 43332222222 2244321 122333345567888888875
No 392
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=96.02 E-value=0.36 Score=49.81 Aligned_cols=240 Identities=15% Similarity=0.141 Sum_probs=124.7
Q ss_pred ccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHh-CC------CcEE---EeCCHHHHH--HHHHHHhccCC
Q 009167 182 AYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALE-GA------ESTV---IMASGMSAS--TVMLLALVPAG 249 (541)
Q Consensus 182 t~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~-g~------e~~i---~~sSGs~Ai--~~al~all~pG 249 (541)
.|.++.....+....+.+-.-+|--. -...++.+.-+++. |. +.-+ -+-||+.|+ ...+.+..-++
T Consensus 69 p~vL~~VrkAE~ql~~~~ldKEYlpI--~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~ 146 (427)
T KOG1411|consen 69 PYVLPSVRKAEQQLASLSLDKEYLPI--TGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPS 146 (427)
T ss_pred eeeeHHHHHHHHHHhhhcccchhccc--cchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccc
Confidence 34555554333322222223344432 23456666666653 32 1222 234676544 44444545568
Q ss_pred CEEEEcCCCCcchHHHHHhhcccCCeEEEE---eCC----CCHHHHHHhccCCC-ceEEEE-eCCCCCCCcccc---HHH
Q 009167 250 GHIVTTTDCYRKTRIFIETVLPKMGITATV---IDP----ADMEGLEAALNNNN-VSLFFT-ESPTNPFLRCVD---VKL 317 (541)
Q Consensus 250 d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~---vd~----~d~e~Le~al~~~~-tklV~l-esP~NPtG~i~d---l~~ 317 (541)
..|.+++|+++.... .+...|+.+.+ .+. .|.+.+.+.+.+.. -..|++ ...+||||.-.. .++
T Consensus 147 ~~I~ip~PTWgNh~~----if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~k 222 (427)
T KOG1411|consen 147 RDIYIPDPTWGNHKN----IFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEK 222 (427)
T ss_pred cceeecCCcccccCc----cccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHH
Confidence 899999999988543 34445665543 333 25444433333211 123333 234699997654 558
Q ss_pred HHHHHHhCCCEEEEeCCCCCCCcccc----------cccCCc-EEEECCccccCCCCCceEEE--EEeChHHHHHHH---
Q 009167 318 VSDLCHKKGAIVCIDGTFATPLNQKA----------LSLGAD-LVLHSATKFIGGHNDVLAGS--ISGSGKLVTQIR--- 381 (541)
Q Consensus 318 Ia~la~~~gi~lIvDea~a~~~~~~~----------~~~gaD-ivv~S~sK~lgg~gd~~gG~--lv~~~~li~~l~--- 381 (541)
|.++.++.+.+-+.|-+|..+...+. .+.|.. +++.|+.|-+|--|...|.+ ++.+.+...++.
T Consensus 223 i~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQl 302 (427)
T KOG1411|consen 223 ISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQL 302 (427)
T ss_pred HHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHH
Confidence 88889999999999999654432221 123333 67789999998776554433 233444444443
Q ss_pred -HHhhhcCCCchHHHHH----------HHHHhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 382 -NLHHVLGGALNPNAAY----------LIIRGMKTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 382 -~~~~~~G~~~s~~~a~----------l~l~~l~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
...+.+-..++...+- +-..++..+....+++...+..|.+.|+..
T Consensus 303 k~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~ 359 (427)
T KOG1411|consen 303 KILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKE 359 (427)
T ss_pred HHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcC
Confidence 2222111111111111 112233444555556666667777777653
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=95.96 E-value=0.02 Score=52.90 Aligned_cols=50 Identities=14% Similarity=0.339 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHh----C--C----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcc
Q 009167 212 TVVVEEKMSALE----G--A----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRK 261 (541)
Q Consensus 212 ~~~Le~~LA~l~----g--~----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~ 261 (541)
..+||+++|+++ | . +++++++++++|+..++.+++.|||.|+++.|.|++
T Consensus 94 ~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 94 LANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 446666666654 4 1 234444455599999999999999999999999974
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=93.51 E-value=0.34 Score=48.18 Aligned_cols=163 Identities=15% Similarity=0.240 Sum_probs=88.5
Q ss_pred HHHHHHHHHhCC---CcEEEeC--CHHHHHHHHHHHhc--cCC-CEEEEcCCCCcchHHHHHhhcccCCeEEEEeC----
Q 009167 214 VVEEKMSALEGA---ESTVIMA--SGMSASTVMLLALV--PAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVID---- 281 (541)
Q Consensus 214 ~Le~~LA~l~g~---e~~i~~s--SGs~Ai~~al~all--~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd---- 281 (541)
++...+-.+.|. ..+++++ +|| .+.+.+..+- +|. ..|+-.+..-.+.+. . .-..|.+...+.
T Consensus 61 e~a~~~i~l~glhav~nc~vvpl~tgm-slslc~~s~r~krpkakyiiw~ridqks~~k---s-i~~agfepiiie~i~d 135 (432)
T KOG3843|consen 61 EFAKDAIHLAGLHAVANCFVVPLATGM-SLSLCFLSLRHKRPKAKYIIWLRIDQKSCFK---S-IIHAGFEPIIIENILD 135 (432)
T ss_pred HHHHHHHHHhhhhhhhceeEEeccccc-cHHHHHHHHhhcCCcccEEEEEecchHHHHH---H-HHhcCCCceeeecccc
Confidence 444444445554 4666654 666 3444444442 343 345544433332221 1 112244444443
Q ss_pred C----CCHHHHHHhccCCCce-EEEEeCCCC-CCCccc-cHHHHHHHHHhCCCEEEEeCCCCCCCc------ccccccC-
Q 009167 282 P----ADMEGLEAALNNNNVS-LFFTESPTN-PFLRCV-DVKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG- 347 (541)
Q Consensus 282 ~----~d~e~Le~al~~~~tk-lV~lesP~N-PtG~i~-dl~~Ia~la~~~gi~lIvDea~a~~~~------~~~~~~g- 347 (541)
. .|++.+++.+++.... ++.+.+.+. -.-+.. .+++|+.+|..|+++-+|.++|+.... ....+.|
T Consensus 136 ~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~gr 215 (432)
T KOG3843|consen 136 GDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGR 215 (432)
T ss_pred chHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhcc
Confidence 2 2778888777653233 333322221 111222 399999999999999999999875321 1112223
Q ss_pred CcEEEECCccccCCCCCceEEEEEe--ChHHHHHHHHHh
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISG--SGKLVTQIRNLH 384 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~--~~~li~~l~~~~ 384 (541)
+|.++.|+-|-|--+ +||.++. ++.+++.+.+..
T Consensus 216 ida~vqsldknf~vp---vggaiia~fk~n~iq~iak~y 251 (432)
T KOG3843|consen 216 IDAFVQSLDKNFMVP---VGGAIIAAFKDNFIQEIAKMY 251 (432)
T ss_pred HHHHHHHhhhcceee---cchhHhhHhHHHHHHHHHHhC
Confidence 588899999988754 3676664 455666665543
No 395
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=85.46 E-value=2.1 Score=37.08 Aligned_cols=89 Identities=18% Similarity=0.238 Sum_probs=59.1
Q ss_pred HHHHHhhcccCCeEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC--CCEEEEeCCCCCCC
Q 009167 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPL 339 (541)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~--gi~lIvDea~a~~~ 339 (541)
...+...+++.|.++.++|.+ +.+++.+.+.+.++.+|.+.... +.......++++..++. ++.+++=+.+.+..
T Consensus 17 l~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~t~~ 94 (121)
T PF02310_consen 17 LLYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPHATAD 94 (121)
T ss_dssp HHHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESSSGHH
T ss_pred HHHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCchhcC
Confidence 344556678889999998765 46788777755468888884433 34444567888887776 78998876665544
Q ss_pred cccccc--cCCcEEEE
Q 009167 340 NQKALS--LGADLVLH 353 (541)
Q Consensus 340 ~~~~~~--~gaDivv~ 353 (541)
+...++ .++|.++.
T Consensus 95 ~~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 95 PEEILREYPGIDYVVR 110 (121)
T ss_dssp HHHHHHHHHTSEEEEE
T ss_pred hHHHhccCcCcceecC
Confidence 444343 57787663
No 396
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=78.96 E-value=10 Score=32.95 Aligned_cols=89 Identities=12% Similarity=0.057 Sum_probs=54.4
Q ss_pred HHHHhhcccCCeEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC---CCEEEEeCCCCCCC
Q 009167 264 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGTFATPL 339 (541)
Q Consensus 264 ~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~---gi~lIvDea~a~~~ 339 (541)
.++...++..|.++.+.... .++++.+.+.+.++.+|.++.-. +.....+.++.+.+++. ++.+++=.......
T Consensus 17 ~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~ 94 (119)
T cd02067 17 NIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRD 94 (119)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEEECCCCChh
Confidence 44556788889999776543 56777776665568888884432 22335567777777775 46666644433222
Q ss_pred cccccccCCcEEEEC
Q 009167 340 NQKALSLGADLVLHS 354 (541)
Q Consensus 340 ~~~~~~~gaDivv~S 354 (541)
+......|+|.++..
T Consensus 95 ~~~~~~~G~D~~~~~ 109 (119)
T cd02067 95 FKFLKEIGVDAYFGP 109 (119)
T ss_pred HHHHHHcCCeEEECC
Confidence 223345677877654
No 397
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=66.03 E-value=29 Score=33.66 Aligned_cols=124 Identities=17% Similarity=0.148 Sum_probs=72.7
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHH--HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe--EEEEeCCC
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPA 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs--~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi--~v~~vd~~ 283 (541)
-.|...++-+.+++..++..++=+++++ +++.++- + +.++.+|++-+..-. .....+..+++.|. .++++..+
T Consensus 29 i~~~~g~lL~~l~~~~~~k~vLEIGt~~GySal~la~-~-l~~~g~i~tiE~~~~-~~~~A~~~~~~ag~~~~I~~~~gd 105 (205)
T PF01596_consen 29 ISPETGQLLQMLVRLTRPKRVLEIGTFTGYSALWLAE-A-LPEDGKITTIEIDPE-RAEIARENFRKAGLDDRIEVIEGD 105 (205)
T ss_dssp HHHHHHHHHHHHHHHHT-SEEEEESTTTSHHHHHHHH-T-STTTSEEEEEESSHH-HHHHHHHHHHHTTGGGGEEEEES-
T ss_pred cCHHHHHHHHHHHHhcCCceEEEeccccccHHHHHHH-h-hcccceEEEecCcHH-HHHHHHHHHHhcCCCCcEEEEEec
Confidence 3566777888899999998877776554 6665542 3 455667777665432 23334444554443 34444444
Q ss_pred CHHHHHHhccCC---CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCC
Q 009167 284 DMEGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 284 d~e~Le~al~~~---~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~ 337 (541)
-.+.|.+...+. +..+||+...- ......++.+.++.+ .|.++|+||+...
T Consensus 106 a~~~l~~l~~~~~~~~fD~VFiDa~K--~~y~~y~~~~~~ll~-~ggvii~DN~l~~ 159 (205)
T PF01596_consen 106 ALEVLPELANDGEEGQFDFVFIDADK--RNYLEYFEKALPLLR-PGGVIIADNVLWR 159 (205)
T ss_dssp HHHHHHHHHHTTTTTSEEEEEEESTG--GGHHHHHHHHHHHEE-EEEEEEEETTTGG
T ss_pred cHhhHHHHHhccCCCceeEEEEcccc--cchhhHHHHHhhhcc-CCeEEEEcccccc
Confidence 445555554432 37899997642 223333556666665 4789999999543
No 398
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=64.51 E-value=29 Score=29.93 Aligned_cols=83 Identities=14% Similarity=0.081 Sum_probs=47.8
Q ss_pred HHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC---CHHHHHHhccC-CCceEEEEeCCC--CCCCccccH
Q 009167 242 LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---DMEGLEAALNN-NNVSLFFTESPT--NPFLRCVDV 315 (541)
Q Consensus 242 l~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---d~e~Le~al~~-~~tklV~lesP~--NPtG~i~dl 315 (541)
+..+..-|=+|+.+. +|..+ ++..|+++..+... .-.++.+.+.+ +++.+|+. .|+ +......+-
T Consensus 18 a~~l~~~G~~i~AT~----gTa~~----L~~~Gi~~~~v~~~~~~g~~~i~~~i~~~g~idlVIn-~~~~~~~~~~~~dg 88 (112)
T cd00532 18 APKLSSDGFPLFATG----GTSRV----LADAGIPVRAVSKRHEDGEPTVDAAIAEKGKFDVVIN-LRDPRRDRCTDEDG 88 (112)
T ss_pred HHHHHHCCCEEEECc----HHHHH----HHHcCCceEEEEecCCCCCcHHHHHHhCCCCEEEEEE-cCCCCcccccCCCh
Confidence 333445565665543 33332 33457766655321 12445666666 66887765 444 211234567
Q ss_pred HHHHHHHHhCCCEEEEeC
Q 009167 316 KLVSDLCHKKGAIVCIDG 333 (541)
Q Consensus 316 ~~Ia~la~~~gi~lIvDe 333 (541)
..|.+.|-+++++++.+-
T Consensus 89 ~~iRR~A~~~~Ip~~T~~ 106 (112)
T cd00532 89 TALLRLARLYKIPVTTPN 106 (112)
T ss_pred HHHHHHHHHcCCCEEECH
Confidence 799999999999998763
No 399
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=64.38 E-value=35 Score=33.03 Aligned_cols=60 Identities=25% Similarity=0.236 Sum_probs=39.9
Q ss_pred hcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEE
Q 009167 269 VLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 269 ~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lI 330 (541)
.++..|+++...|.+|.+.|.++++. +..|++..+........-...|++.|++.|+..+
T Consensus 39 ~l~~~g~~vv~~d~~~~~~l~~al~g--~d~v~~~~~~~~~~~~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 39 QLQALGAEVVEADYDDPESLVAALKG--VDAVFSVTPPSHPSELEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp HHHHTTTEEEES-TT-HHHHHHHHTT--CSEEEEESSCSCCCHHHHHHHHHHHHHHHT-SEE
T ss_pred hhhcccceEeecccCCHHHHHHHHcC--CceEEeecCcchhhhhhhhhhHHHhhhccccceE
Confidence 35556899988899999999999985 5666766665433333334578888888775444
No 400
>PLN02476 O-methyltransferase
Probab=60.38 E-value=68 Score=32.69 Aligned_cols=123 Identities=16% Similarity=0.257 Sum_probs=69.9
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEe--CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE--EEEeCCC
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIM--ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPA 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~--sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~--v~~vd~~ 283 (541)
..|...++...++++.++..++=. ..|..++.++. .+.++.+|+.-+..- ......+..+++.|+. ++.+..+
T Consensus 102 v~~~~g~lL~~L~~~~~ak~VLEIGT~tGySal~lA~--al~~~G~V~TiE~d~-e~~~~Ar~n~~~aGl~~~I~li~Gd 178 (278)
T PLN02476 102 VSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAVAL--VLPESGCLVACERDS-NSLEVAKRYYELAGVSHKVNVKHGL 178 (278)
T ss_pred cCHHHHHHHHHHHHhcCCCeEEEecCCCCHHHHHHHH--hCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 467778889999999998766544 45556665543 244555666654332 2233344455566653 4444443
Q ss_pred CHHHHHHhcc---CCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCC
Q 009167 284 DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 284 d~e~Le~al~---~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a 336 (541)
-.+.|.+... ..+..+||+...- .....-++.+.++.+ .|.++|+|++..
T Consensus 179 A~e~L~~l~~~~~~~~FD~VFIDa~K--~~Y~~y~e~~l~lL~-~GGvIV~DNvL~ 231 (278)
T PLN02476 179 AAESLKSMIQNGEGSSYDFAFVDADK--RMYQDYFELLLQLVR-VGGVIVMDNVLW 231 (278)
T ss_pred HHHHHHHHHhcccCCCCCEEEECCCH--HHHHHHHHHHHHhcC-CCcEEEEecCcc
Confidence 3444544331 1246799996543 122222455555554 477788999853
No 401
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=59.45 E-value=90 Score=32.93 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=32.4
Q ss_pred CceEEEEeC-----CCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC
Q 009167 296 NVSLFFTES-----PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 296 ~tklV~les-----P~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~ 339 (541)
+..+++++. -+..+-...|+..|..+-+..++++|+|-+++.+.
T Consensus 236 n~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 236 NPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 456777766 22223466789999988777799999999988754
No 402
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=59.42 E-value=1.7e+02 Score=29.32 Aligned_cols=43 Identities=14% Similarity=0.146 Sum_probs=30.6
Q ss_pred CceEEEEe-CC---CCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC
Q 009167 296 NVSLFFTE-SP---TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP 338 (541)
Q Consensus 296 ~tklV~le-sP---~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~ 338 (541)
+.++++++ .. .+++-...|+..|..+.+..+.+||+|-++..+
T Consensus 150 n~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G 196 (250)
T PRK13397 150 KSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTG 196 (250)
T ss_pred CCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCc
Confidence 35677775 21 134444788988888888789999999887654
No 403
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=57.40 E-value=43 Score=29.33 Aligned_cols=83 Identities=14% Similarity=0.149 Sum_probs=48.9
Q ss_pred HhhcccCCeEEEEeCCCCHHHHHHhccC-CCceEEEEeCCCCCCCccccHHHHHHHHHhCC--CEEEEeCCCCCCCccc-
Q 009167 267 ETVLPKMGITATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQK- 342 (541)
Q Consensus 267 ~~~l~~~Gi~v~~vd~~d~e~Le~al~~-~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g--i~lIvDea~a~~~~~~- 342 (541)
...++..|.++...+....+...+.+.. .+.++|.+.. .+.......++++..|+.+ +++++=+.+.+..+..
T Consensus 9 aa~l~~~g~~v~~~~~~~~~~~~~~~~~~~~pdiv~~S~---~~~~~~~~~~~~~~ik~~~p~~~iv~GG~~~t~~p~~~ 85 (127)
T cd02068 9 AAVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISL---MTSAIYEALELAKIAKEVLPNVIVVVGGPHATFFPEEI 85 (127)
T ss_pred HHHHHHCCCeeeecCCCCHHHHHHHHHHhcCCCEEEEee---ccccHHHHHHHHHHHHHHCCCCEEEECCcchhhCHHHH
Confidence 3456666878777776666655555543 3478888743 2233335667888888764 8888766655543332
Q ss_pred ccccCCcEEE
Q 009167 343 ALSLGADLVL 352 (541)
Q Consensus 343 ~~~~gaDivv 352 (541)
....++|+++
T Consensus 86 ~~~~~~D~vv 95 (127)
T cd02068 86 LEEPGVDFVV 95 (127)
T ss_pred hcCCCCCEEE
Confidence 1223455554
No 404
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=56.03 E-value=29 Score=38.31 Aligned_cols=85 Identities=18% Similarity=0.176 Sum_probs=55.9
Q ss_pred HHhhcccCC-eEEEEeCCC----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC--CCEEEEeCCCCCC
Q 009167 266 IETVLPKMG-ITATVIDPA----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATP 338 (541)
Q Consensus 266 ~~~~l~~~G-i~v~~vd~~----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~--gi~lIvDea~a~~ 338 (541)
+...++..| .+|.++|.. +.+++.+.+...++.+|.+... |.......++++.+++. ++.+|+=+.+.+.
T Consensus 28 lAa~L~~~G~~~V~iiD~~~~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t~ 104 (497)
T TIGR02026 28 IGGALLDAGYHDVTFLDAMTGPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPTF 104 (497)
T ss_pred HHHHHHhcCCcceEEecccccCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcCc
Confidence 334466678 688888743 5677777776545788888432 34444566888888876 8999988777665
Q ss_pred Ccccccc--cCCcEEEE
Q 009167 339 LNQKALS--LGADLVLH 353 (541)
Q Consensus 339 ~~~~~~~--~gaDivv~ 353 (541)
.+...+. .++|+++.
T Consensus 105 ~~~~~l~~~p~vD~Vv~ 121 (497)
T TIGR02026 105 MFHQVLTEAPWIDFIVR 121 (497)
T ss_pred CHHHHHhcCCCccEEEe
Confidence 5544432 25787764
No 405
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=55.86 E-value=2.7e+02 Score=29.29 Aligned_cols=133 Identities=16% Similarity=0.133 Sum_probs=72.6
Q ss_pred EEEeCCHH-HHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHH---hhcccC-CeEEEEeCCCCHHHHHHhccCCCceEE
Q 009167 228 TVIMASGM-SASTVMLLALVP--AGGHIVTTTDCYRKTRIFIE---TVLPKM-GITATVIDPADMEGLEAALNNNNVSLF 300 (541)
Q Consensus 228 ~i~~sSGs-~Ai~~al~all~--pGd~Vlv~~~~y~~~~~~~~---~~l~~~-Gi~v~~vd~~d~e~Le~al~~~~tklV 300 (541)
.+.++.|+ +.-.--+..|++ +|-.+|+-+..|+-....++ .+-+.+ .+.+.-=+..+.+..++++... ...|
T Consensus 98 ~~~vavG~~~~d~er~~~L~~~~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vIaGNV~T~e~a~~Li~aG-AD~v 176 (346)
T PRK05096 98 HVMVSTGTSDADFEKTKQILALSPALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVVTGEMVEELILSG-ADIV 176 (346)
T ss_pred eEEEEecCCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHcC-CCEE
Confidence 44446665 333333444544 46455555666765433332 221222 2333332345778777777653 4444
Q ss_pred E-------EeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCC-CCCcccccccCCcEEEECCccccCCCC
Q 009167 301 F-------TESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFIGGHN 363 (541)
Q Consensus 301 ~-------lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a-~~~~~~~~~~gaDivv~S~sK~lgg~g 363 (541)
- +|+---.+|.=.| +.+.++.|+++|+++|.|.-.- .+-..+.+..|+|.|. +...|+|+-
T Consensus 177 KVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGGi~~sGDI~KAlaaGAd~VM--lGsllAGt~ 249 (346)
T PRK05096 177 KVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAFGGGADFVM--LGGMLAGHE 249 (346)
T ss_pred EEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCCcccccHHHHHHHcCCCEEE--eChhhcCcc
Confidence 2 2233334554444 5577788889999999998633 2333566778888776 334455443
No 406
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=55.86 E-value=1.4e+02 Score=32.34 Aligned_cols=85 Identities=15% Similarity=0.197 Sum_probs=52.6
Q ss_pred HhccCCCEEEEcCCCCcchHHHHHhhcccCCeE---EEEeCCCCHHHHHHhccCCCceEEEEeCCC---CCC-----Ccc
Q 009167 244 ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT---ATVIDPADMEGLEAALNNNNVSLFFTESPT---NPF-----LRC 312 (541)
Q Consensus 244 all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~---v~~vd~~d~e~Le~al~~~~tklV~lesP~---NPt-----G~i 312 (541)
.+.+.+ .|++-.-+-.. ..++..+.++|+. +......+++++.+.+++.+++++++.+++ ++. |.+
T Consensus 116 ~lA~~~-~vLYVsGEES~--~QiklRA~RL~~~~~~l~l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsV 192 (456)
T COG1066 116 RLAKRG-KVLYVSGEESL--QQIKLRADRLGLPTNNLYLLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSV 192 (456)
T ss_pred HHHhcC-cEEEEeCCcCH--HHHHHHHHHhCCCccceEEehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcH
Confidence 445556 55544433322 2233345566642 333345689999998877678999998886 333 444
Q ss_pred ccHH----HHHHHHHhCCCEEEE
Q 009167 313 VDVK----LVSDLCHKKGAIVCI 331 (541)
Q Consensus 313 ~dl~----~Ia~la~~~gi~lIv 331 (541)
.-++ +|.++|+++|+.+++
T Consensus 193 sQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 193 SQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEE
Confidence 3333 788899999986654
No 407
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=54.05 E-value=1.7e+02 Score=30.62 Aligned_cols=124 Identities=18% Similarity=0.115 Sum_probs=67.5
Q ss_pred EEEeCCHH-HHHHHHHHHhccCC--CEEEEcCCCCcchHHHHH---hhcccC-CeEEEEeCCCCHHHHHHhccCCCceEE
Q 009167 228 TVIMASGM-SASTVMLLALVPAG--GHIVTTTDCYRKTRIFIE---TVLPKM-GITATVIDPADMEGLEAALNNNNVSLF 300 (541)
Q Consensus 228 ~i~~sSGs-~Ai~~al~all~pG--d~Vlv~~~~y~~~~~~~~---~~l~~~-Gi~v~~vd~~d~e~Le~al~~~~tklV 300 (541)
.+..+.|+ +.-.--+..|++.| -.+|+-+..|+-....++ .+-+.+ +..+.-=+..+++..++++... ...|
T Consensus 97 ~~~vsvG~~~~d~er~~~L~~a~~~~d~iviD~AhGhs~~~i~~ik~ir~~~p~~~viaGNV~T~e~a~~Li~aG-AD~i 175 (343)
T TIGR01305 97 NVAVSSGSSDNDLEKMTSILEAVPQLKFICLDVANGYSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILSG-ADIV 175 (343)
T ss_pred eEEEEeccCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHhhCCCCeEEEecccCHHHHHHHHHcC-CCEE
Confidence 44556666 44334445555543 344555666665433332 221222 2333322345788888888764 6666
Q ss_pred EEe-CCC-C-----CCCcccc----HHHHHHHHHhCCCEEEEeCCCCC-CCcccccccCCcEEE
Q 009167 301 FTE-SPT-N-----PFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVL 352 (541)
Q Consensus 301 ~le-sP~-N-----PtG~i~d----l~~Ia~la~~~gi~lIvDea~a~-~~~~~~~~~gaDivv 352 (541)
.+. .|. | .+|.-.| +.++++.++++++.+|.|.-.-. +-..+.+..|+|.+.
T Consensus 176 kVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGGIr~~gDI~KALA~GAd~VM 239 (343)
T TIGR01305 176 KVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGCTCPGDVAKAFGAGADFVM 239 (343)
T ss_pred EEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCCcCchhHHHHHHHcCCCEEE
Confidence 653 121 2 2333323 44666666778999999986433 223566778999876
No 408
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=53.59 E-value=57 Score=32.73 Aligned_cols=111 Identities=23% Similarity=0.285 Sum_probs=59.6
Q ss_pred HHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcc----hHHHHHhhcccCCeEEEEeCCCCHHHH
Q 009167 214 VVEEKMSALEGA-ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRK----TRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 214 ~Le~~LA~l~g~-e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~----~~~~~~~~l~~~Gi~v~~vd~~d~e~L 288 (541)
.|++....+-+. .-.|.|++|.....++..+.-.-||+|+.-....+- ...-....++..|++..+++.+-++
T Consensus 6 Kl~~l~~~ik~~~kv~vAfSGGvDSslLa~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~~~~-- 83 (269)
T COG1606 6 KLERLKKAIKEKKKVVVAFSGGVDSSLLAKLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMNRMD-- 83 (269)
T ss_pred HHHHHHHHHhhcCeEEEEecCCccHHHHHHHHHHHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehhhcc--
Confidence 344333333333 457888888855444444433346665443322221 2222334466678887776643222
Q ss_pred HHhccCCCceEEEEeCCCCCCCcccc--HHHHHHHHHhCCCEEEEeCCCC
Q 009167 289 EAALNNNNVSLFFTESPTNPFLRCVD--VKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 289 e~al~~~~tklV~lesP~NPtG~i~d--l~~Ia~la~~~gi~lIvDea~a 336 (541)
++ +..+|-|+.-.|-- .+.|.+.++++|.-+|+|+|-+
T Consensus 84 -----~~-----~~~n~~~rCY~CK~~v~~~l~~~a~~~Gyd~V~dGtNa 123 (269)
T COG1606 84 -----PE-----FKENPENRCYLCKRAVYSTLVEEAEKRGYDVVADGTNA 123 (269)
T ss_pred -----hh-----hccCCCCcchHHHHHHHHHHHHHHHHcCCCEEEeCCcH
Confidence 11 12234444333322 5588899999999999999944
No 409
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=53.44 E-value=1.7e+02 Score=28.93 Aligned_cols=120 Identities=19% Similarity=0.250 Sum_probs=74.7
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeC--CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe--EEEEeCCC
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMA--SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPA 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~s--SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi--~v~~vd~~ 283 (541)
..|..-.|-+.+.+++++..++-++ +|.+|+..++. +.++.+|+..+....... ......+..|+ ++.++...
T Consensus 57 v~~d~g~fl~~li~~~~ak~~lelGvfTGySaL~~Ala--lp~dGrv~a~eid~~~~~-~~~~~~k~agv~~KI~~i~g~ 133 (237)
T KOG1663|consen 57 VGPDKGQFLQMLIRLLNAKRTLELGVFTGYSALAVALA--LPEDGRVVAIEIDADAYE-IGLELVKLAGVDHKITFIEGP 133 (237)
T ss_pred cChHHHHHHHHHHHHhCCceEEEEecccCHHHHHHHHh--cCCCceEEEEecChHHHH-HhHHHHHhccccceeeeeecc
Confidence 4577778899999999998766543 56666665543 566777777665443322 22233333343 45556555
Q ss_pred CHHHHHHhccC---CCceEEEEeCCC-CCCCccccHHHHHHHHHhCCCEEEEeCC
Q 009167 284 DMEGLEAALNN---NNVSLFFTESPT-NPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 284 d~e~Le~al~~---~~tklV~lesP~-NPtG~i~dl~~Ia~la~~~gi~lIvDea 334 (541)
..+.|.+.+.+ +.-.++|+..== |-. ...+++.++.+ .|.++++|++
T Consensus 134 a~esLd~l~~~~~~~tfDfaFvDadK~nY~---~y~e~~l~Llr-~GGvi~~DNv 184 (237)
T KOG1663|consen 134 ALESLDELLADGESGTFDFAFVDADKDNYS---NYYERLLRLLR-VGGVIVVDNV 184 (237)
T ss_pred hhhhHHHHHhcCCCCceeEEEEccchHHHH---HHHHHHHhhcc-cccEEEEecc
Confidence 56666666654 235688885421 211 34677788876 4889999998
No 410
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=51.98 E-value=2.1e+02 Score=28.62 Aligned_cols=123 Identities=17% Similarity=0.194 Sum_probs=70.9
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCC--HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe--EEEEeCCCC
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMAS--GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPAD 284 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sS--Gs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi--~v~~vd~~d 284 (541)
.|...+|-..+++..++..++=+++ |..++.++. + +.++.+|++-+..- ......+..+++.|+ .++++..+-
T Consensus 64 ~~~~g~lL~~l~~~~~ak~iLEiGT~~GySal~la~-a-l~~~g~v~tiE~~~-~~~~~Ar~~~~~ag~~~~I~~~~G~a 140 (247)
T PLN02589 64 SADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATAL-A-LPEDGKILAMDINR-ENYELGLPVIQKAGVAHKIDFREGPA 140 (247)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEEeChhhHHHHHHHh-h-CCCCCEEEEEeCCH-HHHHHHHHHHHHCCCCCceEEEeccH
Confidence 4677788888999999887666554 446665442 2 45566777766542 222333344554553 344444443
Q ss_pred HHHHHHhccC----CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCC
Q 009167 285 MEGLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 285 ~e~Le~al~~----~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~ 337 (541)
.+-|.+.... .+..+||+..- .......++.+.++.+ .|.++|+||+...
T Consensus 141 ~e~L~~l~~~~~~~~~fD~iFiDad--K~~Y~~y~~~~l~ll~-~GGviv~DNvl~~ 194 (247)
T PLN02589 141 LPVLDQMIEDGKYHGTFDFIFVDAD--KDNYINYHKRLIDLVK-VGGVIGYDNTLWN 194 (247)
T ss_pred HHHHHHHHhccccCCcccEEEecCC--HHHhHHHHHHHHHhcC-CCeEEEEcCCCCC
Confidence 4545554321 24789999543 3333334555566665 4778999999543
No 411
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=50.66 E-value=1.8e+02 Score=27.32 Aligned_cols=104 Identities=13% Similarity=0.179 Sum_probs=53.6
Q ss_pred cEEEeC-CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCC
Q 009167 227 STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (541)
Q Consensus 227 ~~i~~s-SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP 305 (541)
.++++. +|..+- .+...+.+.|.+|++..........+...+....+.++..++..+.+++.+.+.+ ..+|+..+|
T Consensus 30 ~vlVlGgtG~iG~-~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~diVi~at~ 106 (194)
T cd01078 30 TAVVLGGTGPVGQ-RAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG--ADVVFAAGA 106 (194)
T ss_pred EEEEECCCCHHHH-HHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc--CCEEEECCC
Confidence 466665 365443 2333445667666654433222222222222234566666777788888888864 567777555
Q ss_pred CCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC
Q 009167 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 306 ~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~ 339 (541)
. |...+ .+.+... ....+++|-.+....
T Consensus 107 ~---g~~~~--~~~~~~~-~~~~vv~D~~~~~~~ 134 (194)
T cd01078 107 A---GVELL--EKLAWAP-KPLAVAADVNAVPPV 134 (194)
T ss_pred C---Cceec--hhhhccc-CceeEEEEccCCCCC
Confidence 4 33211 1111111 225689998765443
No 412
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=49.46 E-value=85 Score=32.81 Aligned_cols=131 Identities=17% Similarity=0.232 Sum_probs=80.4
Q ss_pred HHHHHHHHHhccCCCEEEE-cCCCCcc-hHHHHHhhcccCCeEEEEe-CCCCH-----HHHHHhccCCCceEEEEeCCC-
Q 009167 236 SASTVMLLALVPAGGHIVT-TTDCYRK-TRIFIETVLPKMGITATVI-DPADM-----EGLEAALNNNNVSLFFTESPT- 306 (541)
Q Consensus 236 ~Ai~~al~all~pGd~Vlv-~~~~y~~-~~~~~~~~l~~~Gi~v~~v-d~~d~-----e~Le~al~~~~tklV~lesP~- 306 (541)
..|.-+..-+.+.|-.|++ ...+|.. ....++.+.++.|+++..- ...|+ ++++.+..+ +..+|++.+..
T Consensus 154 TTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar-~~DvvliDTAGR 232 (340)
T COG0552 154 TTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKAR-GIDVVLIDTAGR 232 (340)
T ss_pred hHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHc-CCCEEEEeCccc
Confidence 4555555556677766554 4456654 3344555677888887653 24454 556666666 48899998763
Q ss_pred --CCCCccccHHHHHHHHHhCC------CEEEEeCCCCCCCccc--cc--ccCCcEEEECCccccCCCCCceEEEEEe
Q 009167 307 --NPFLRCVDVKLVSDLCHKKG------AIVCIDGTFATPLNQK--AL--SLGADLVLHSATKFIGGHNDVLAGSISG 372 (541)
Q Consensus 307 --NPtG~i~dl~~Ia~la~~~g------i~lIvDea~a~~~~~~--~~--~~gaDivv~S~sK~lgg~gd~~gG~lv~ 372 (541)
|-..-+-.++.|.+++++.. ++++.|.+.+.-...+ .+ ..+.|-++ +||.=|. ..||.++.
T Consensus 233 Lhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiI--lTKlDgt---AKGG~il~ 305 (340)
T COG0552 233 LHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGII--LTKLDGT---AKGGIILS 305 (340)
T ss_pred ccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEE--EEecccC---CCcceeee
Confidence 55555556888888888754 7788899966432211 11 23456555 6786543 35787764
No 413
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=47.71 E-value=68 Score=33.96 Aligned_cols=81 Identities=16% Similarity=0.056 Sum_probs=51.5
Q ss_pred ccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCC--CCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccC
Q 009167 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLG 347 (541)
Q Consensus 271 ~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~--NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~g 347 (541)
+.++..+..-...+.++.+.+++-. ...|.+.+-. +-.+...+++.|.++++..++.||+|.-...+. ..+.+.+|
T Consensus 233 ~~~~~pviiKgV~~~eda~~a~~~G-~d~I~VSnhGGrqld~~~~~~~~L~ei~~~~~~~vi~dGGIr~g~Dv~KALaLG 311 (361)
T cd04736 233 DLWPHKLLVKGIVTAEDAKRCIELG-ADGVILSNHGGRQLDDAIAPIEALAEIVAATYKPVLIDSGIRRGSDIVKALALG 311 (361)
T ss_pred HhCCCCEEEecCCCHHHHHHHHHCC-cCEEEECCCCcCCCcCCccHHHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHHcC
Confidence 3444445444556888888888764 8888884332 122223348888888888889999997654432 23455667
Q ss_pred CcEEE
Q 009167 348 ADLVL 352 (541)
Q Consensus 348 aDivv 352 (541)
+|.+.
T Consensus 312 A~aV~ 316 (361)
T cd04736 312 ANAVL 316 (361)
T ss_pred CCEEE
Confidence 66654
No 414
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=46.83 E-value=1.6e+02 Score=25.32 Aligned_cols=30 Identities=13% Similarity=0.052 Sum_probs=19.5
Q ss_pred ceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEE
Q 009167 297 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 297 tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lI 330 (541)
.-+|++ + ..|...++-++++.++++|+.++
T Consensus 62 ~~~i~i-S---~~g~~~~~~~~~~~a~~~g~~iv 91 (139)
T cd05013 62 DVVIAI-S---FSGETKETVEAAEIAKERGAKVI 91 (139)
T ss_pred CEEEEE-e---CCCCCHHHHHHHHHHHHcCCeEE
Confidence 444544 3 34555667788888999986554
No 415
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=45.88 E-value=99 Score=28.32 Aligned_cols=84 Identities=17% Similarity=0.215 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
+|.-+-. ++..+++.|-+|....-.-.... . ..++++...|..|++.+.+++.. ...|+...+.++. ..
T Consensus 7 tG~vG~~-l~~~L~~~~~~V~~~~R~~~~~~----~---~~~~~~~~~d~~d~~~~~~al~~--~d~vi~~~~~~~~-~~ 75 (183)
T PF13460_consen 7 TGFVGRA-LAKQLLRRGHEVTALVRSPSKAE----D---SPGVEIIQGDLFDPDSVKAALKG--ADAVIHAAGPPPK-DV 75 (183)
T ss_dssp TSHHHHH-HHHHHHHTTSEEEEEESSGGGHH----H---CTTEEEEESCTTCHHHHHHHHTT--SSEEEECCHSTTT-HH
T ss_pred CChHHHH-HHHHHHHCCCEEEEEecCchhcc----c---ccccccceeeehhhhhhhhhhhh--cchhhhhhhhhcc-cc
Confidence 3443333 34455666655544332222211 1 56888888899999999999985 5566654433222 33
Q ss_pred ccHHHHHHHHHhCCC
Q 009167 313 VDVKLVSDLCHKKGA 327 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi 327 (541)
...+.+.+.|++.|+
T Consensus 76 ~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 76 DAAKNIIEAAKKAGV 90 (183)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred ccccccccccccccc
Confidence 346677788887664
No 416
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=45.71 E-value=82 Score=27.52 Aligned_cols=69 Identities=16% Similarity=0.073 Sum_probs=43.5
Q ss_pred HHHHHhhcccCCeEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC---CCEEEEeC
Q 009167 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDG 333 (541)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~---gi~lIvDe 333 (541)
..++..+++..|.++.+.-.+ .++++.+++.+.+..+|.++.... -....++++.+..++. ++.+++=.
T Consensus 16 ~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~--~~~~~~~~~~~~L~~~~~~~i~i~~GG 88 (122)
T cd02071 16 AKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSG--GHMTLFPEVIELLRELGAGDILVVGGG 88 (122)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccch--hhHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 344555678889999887643 566666666544588888855442 2223467777777766 45666543
No 417
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=45.39 E-value=2.5e+02 Score=27.56 Aligned_cols=127 Identities=20% Similarity=0.320 Sum_probs=64.8
Q ss_pred HHHHhccCCCEEEEcCCC-CcchHHHHHhhcccCCeEEE--EeCCCCHHHHHHhccCCCceEEEEeCCCCCC--Cccc-c
Q 009167 241 MLLALVPAGGHIVTTTDC-YRKTRIFIETVLPKMGITAT--VIDPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV-D 314 (541)
Q Consensus 241 al~all~pGd~Vlv~~~~-y~~~~~~~~~~l~~~Gi~v~--~vd~~d~e~Le~al~~~~tklV~lesP~NPt--G~i~-d 314 (541)
.+..+.+.|-..|+--.+ ..-..+.+ +..+..|++.- +-+...++.++..+.+ +.+|.+.+.+ |. |.-. |
T Consensus 76 ~i~~fa~agad~It~H~E~~~~~~r~i-~~Ik~~G~kaGv~lnP~Tp~~~i~~~l~~--vD~VllMsVn-PGfgGQ~Fi~ 151 (220)
T COG0036 76 YIEAFAKAGADIITFHAEATEHIHRTI-QLIKELGVKAGLVLNPATPLEALEPVLDD--VDLVLLMSVN-PGFGGQKFIP 151 (220)
T ss_pred HHHHHHHhCCCEEEEEeccCcCHHHHH-HHHHHcCCeEEEEECCCCCHHHHHHHHhh--CCEEEEEeEC-CCCcccccCH
Confidence 344555666333333222 22223333 23455565543 3345568888888864 7788887765 53 3322 2
Q ss_pred -----HHHHHHHHHhC-CCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh
Q 009167 315 -----VKLVSDLCHKK-GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH 384 (541)
Q Consensus 315 -----l~~Ia~la~~~-gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~ 384 (541)
++++.++..+. ++.+-+|+-...--.....+.|+|+++ .|-++...+++.+.++.++
T Consensus 152 ~~l~Ki~~lr~~~~~~~~~~IeVDGGI~~~t~~~~~~AGad~~V-------------aGSalF~~~d~~~~i~~~~ 214 (220)
T COG0036 152 EVLEKIRELRAMIDERLDILIEVDGGINLETIKQLAAAGADVFV-------------AGSALFGADDYKATIRELR 214 (220)
T ss_pred HHHHHHHHHHHHhcccCCeEEEEeCCcCHHHHHHHHHcCCCEEE-------------EEEEEeCCccHHHHHHHHH
Confidence 33444444433 567778864322111223356899877 1334555555555555443
No 418
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=45.03 E-value=3.1e+02 Score=26.88 Aligned_cols=122 Identities=16% Similarity=0.183 Sum_probs=63.3
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHH--HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe--EEEEeCCCC
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPAD 284 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs--~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi--~v~~vd~~d 284 (541)
.|...++-..+++..++..++=+++|+ .++.++ ..+.++.+|+.-+..-. .....+..++..|+ .++++..+-
T Consensus 53 ~~~~g~~L~~l~~~~~~~~vLEiGt~~G~s~l~la--~~~~~~g~v~tiD~d~~-~~~~A~~n~~~~gl~~~i~~~~gda 129 (234)
T PLN02781 53 PVDEGLFLSMLVKIMNAKNTLEIGVFTGYSLLTTA--LALPEDGRITAIDIDKE-AYEVGLEFIKKAGVDHKINFIQSDA 129 (234)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccHHHHHHH--HhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEccH
Confidence 455667778888888887776666554 444332 22344456766654432 22333344444454 234333332
Q ss_pred HHHHHHhcc---CCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCC
Q 009167 285 MEGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 285 ~e~Le~al~---~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a 336 (541)
.+.|.+... ..+..+||+...-.+.-. -++.+.++.+ .|.++++|++..
T Consensus 130 ~~~L~~l~~~~~~~~fD~VfiDa~k~~y~~--~~~~~~~ll~-~GG~ii~dn~l~ 181 (234)
T PLN02781 130 LSALDQLLNNDPKPEFDFAFVDADKPNYVH--FHEQLLKLVK-VGGIIAFDNTLW 181 (234)
T ss_pred HHHHHHHHhCCCCCCCCEEEECCCHHHHHH--HHHHHHHhcC-CCeEEEEEcCCc
Confidence 333333321 124678998543211111 1344445554 467889999854
No 419
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=44.63 E-value=2e+02 Score=29.63 Aligned_cols=103 Identities=11% Similarity=0.087 Sum_probs=53.2
Q ss_pred HhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEcC--CCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCc
Q 009167 222 LEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV 297 (541)
Q Consensus 222 l~g~e~~i~~sSGs~Ai~~al~all~pGd--~Vlv~~--~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~t 297 (541)
+....+.|++-+.+..+...|....+.|. +|++.. |.+.| +.+. ..|...|++++++....+ ...+.+ +
T Consensus 112 ~i~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G-~~~a-~~L~~~gI~vtlI~Dsa~---~~~m~~--v 184 (301)
T TIGR00511 112 RIRDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQG-HITA-KELRDYGIPVTLIVDSAV---RYFMKE--V 184 (301)
T ss_pred HcCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchH-HHHH-HHHHHCCCCEEEEehhHH---HHHHHh--C
Confidence 33334566665545444444444444443 455443 44444 3333 456677999988753322 223332 4
Q ss_pred eEEEEeCC-CCCCCcccc---HHHHHHHHHhCCCEEEE
Q 009167 298 SLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 298 klV~lesP-~NPtG~i~d---l~~Ia~la~~~gi~lIv 331 (541)
..|++-.= --..|.+.. --.++-+|+.++++++|
T Consensus 185 d~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 185 DHVVVGADAITANGALINKIGTSQLALAAREARVPFMV 222 (301)
T ss_pred CEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEE
Confidence 45554111 122344433 23677788999998886
No 420
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=44.56 E-value=1e+02 Score=28.08 Aligned_cols=47 Identities=13% Similarity=0.094 Sum_probs=32.6
Q ss_pred HHHHHhccCCCceEEEEeCC--CCCCCccccHHHHHHHHHhCCCEEEEeC
Q 009167 286 EGLEAALNNNNVSLFFTESP--TNPFLRCVDVKLVSDLCHKKGAIVCIDG 333 (541)
Q Consensus 286 e~Le~al~~~~tklV~lesP--~NPtG~i~dl~~Ia~la~~~gi~lIvDe 333 (541)
.++.+.+.++++.+|+. .| ..+.+...|...|.+.|-++|++++..-
T Consensus 65 ~~i~~~I~~g~i~lVIn-t~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l 113 (142)
T PRK05234 65 QQIGALIAEGKIDMLIF-FRDPLTAQPHDPDVKALLRLADVWNIPVATNR 113 (142)
T ss_pred hhHHHHHHcCceeEEEE-ecCCCCCCcccchHHHHHHHHHHcCCCEEcCH
Confidence 44666676656777655 44 4444435578899999999999998643
No 421
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=43.58 E-value=1.2e+02 Score=30.70 Aligned_cols=89 Identities=12% Similarity=0.145 Sum_probs=45.2
Q ss_pred HHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEEEe-CCC-CHHHHHHhccCCCceEEEEeCCCCCCCccc----c
Q 009167 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI-DPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCV----D 314 (541)
Q Consensus 242 l~all~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v-d~~-d~e~Le~al~~~~tklV~lesP~NPtG~i~----d 314 (541)
+..+.+.| |-|++++..+.-...+. ..++..|+...++ .+. ..+.++...+.. ...||+.+....||.-. .
T Consensus 112 ~~~~~~aGvdgviipDLP~ee~~~~~-~~~~~~gi~~I~lv~PtT~~eri~~i~~~a-~gFIY~vS~~GvTG~~~~~~~~ 189 (263)
T CHL00200 112 IKKISQAGVKGLIIPDLPYEESDYLI-SVCNLYNIELILLIAPTSSKSRIQKIARAA-PGCIYLVSTTGVTGLKTELDKK 189 (263)
T ss_pred HHHHHHcCCeEEEecCCCHHHHHHHH-HHHHHcCCCEEEEECCCCCHHHHHHHHHhC-CCcEEEEcCCCCCCCCccccHH
Confidence 33334444 66777776554433333 3455666654443 333 345555554432 33666656555667532 2
Q ss_pred HHHHHHHHHhC-CCEEEEe
Q 009167 315 VKLVSDLCHKK-GAIVCID 332 (541)
Q Consensus 315 l~~Ia~la~~~-gi~lIvD 332 (541)
++++.+..+++ +.++++|
T Consensus 190 ~~~~i~~ir~~t~~Pi~vG 208 (263)
T CHL00200 190 LKKLIETIKKMTNKPIILG 208 (263)
T ss_pred HHHHHHHHHHhcCCCEEEE
Confidence 44555555543 5666664
No 422
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=43.25 E-value=2e+02 Score=29.67 Aligned_cols=103 Identities=12% Similarity=0.132 Sum_probs=54.1
Q ss_pred HhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEcC--CCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCc
Q 009167 222 LEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV 297 (541)
Q Consensus 222 l~g~e~~i~~sSGs~Ai~~al~all~pGd--~Vlv~~--~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~t 297 (541)
+....+.|++-+.+..+...|....+.|. +|++.. |...| ..+. ..|...|++++++....+..+ +.+ +
T Consensus 117 ~i~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G-~~~a-~~L~~~GI~vtlI~Dsav~~~---m~~--v 189 (310)
T PRK08535 117 RIRDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQG-HITA-KELAEYGIPVTLIVDSAVRYF---MKD--V 189 (310)
T ss_pred HcCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhH-HHHH-HHHHHCCCCEEEEehhHHHHH---HHh--C
Confidence 33334566665545444444444444443 455543 44444 3333 446677999988764333333 322 4
Q ss_pred eEEEEeCC-CCCCCcccc---HHHHHHHHHhCCCEEEE
Q 009167 298 SLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 298 klV~lesP-~NPtG~i~d---l~~Ia~la~~~gi~lIv 331 (541)
..|++-.= --..|.+.. --.++-+|+.+++++++
T Consensus 190 d~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 190 DKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMV 227 (310)
T ss_pred CEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEE
Confidence 55555111 123454443 23677788999998886
No 423
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=43.02 E-value=1.8e+02 Score=30.71 Aligned_cols=69 Identities=17% Similarity=0.116 Sum_probs=43.6
Q ss_pred cccCCeEEEEeCC--CCHHHHHHhcc----CCCceEEEEe-CCC-CC--CCccccHHHHHHHHHhCCCEEEEeCCCCCC
Q 009167 270 LPKMGITATVIDP--ADMEGLEAALN----NNNVSLFFTE-SPT-NP--FLRCVDVKLVSDLCHKKGAIVCIDGTFATP 338 (541)
Q Consensus 270 l~~~Gi~v~~vd~--~d~e~Le~al~----~~~tklV~le-sP~-NP--tG~i~dl~~Ia~la~~~gi~lIvDea~a~~ 338 (541)
+...|..|..-.. .++++++.+++ .++.++++++ ..+ .| +-...|+..|..+-+.++++|++|-.+..+
T Consensus 221 ~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 221 AGRVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred HHccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 3445655554333 36666665552 2335677775 222 22 234458999998888899999999988765
No 424
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=42.85 E-value=1.1e+02 Score=27.37 Aligned_cols=72 Identities=15% Similarity=0.048 Sum_probs=44.2
Q ss_pred CCcchHHHHHhhcccCCeEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC---CEEEE
Q 009167 258 CYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCI 331 (541)
Q Consensus 258 ~y~~~~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g---i~lIv 331 (541)
.|.--.++....++..|.+|.....+ +++++.++..+.+..+|.+++-. +....-++++.+..++.| +.+++
T Consensus 14 ~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~--~~~~~~~~~~~~~L~~~g~~~i~viv 89 (132)
T TIGR00640 14 GHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLA--GGHLTLVPALRKELDKLGRPDILVVV 89 (132)
T ss_pred ccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCch--hhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 34444455666788889998876543 56665444433358888885544 233334678888777753 45555
No 425
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=41.76 E-value=1.4e+02 Score=31.26 Aligned_cols=116 Identities=13% Similarity=0.059 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhCC----CcE-EEeCCHHHHHHHHHHHhccCCCEE--EEcCCCCcch--HHHHHhhcccCCeEEEEeCCC
Q 009167 213 VVVEEKMSALEGA----EST-VIMASGMSASTVMLLALVPAGGHI--VTTTDCYRKT--RIFIETVLPKMGITATVIDPA 283 (541)
Q Consensus 213 ~~Le~~LA~l~g~----e~~-i~~sSGs~Ai~~al~all~pGd~V--lv~~~~y~~~--~~~~~~~l~~~Gi~v~~vd~~ 283 (541)
.+|++.+.++-+. -++ |.+++|-....++....-.-|..+ +.-++.+..- ...++..++.+|++...+..
T Consensus 43 ~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~- 121 (343)
T TIGR03573 43 KELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI- 121 (343)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC-
Confidence 3555555554321 234 455666544333311111124333 3445555432 22455567778888776654
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCCCccc--cHHHHHHHHHhCCCEEEEeCCC
Q 009167 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCV--DVKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 284 d~e~Le~al~~~~tklV~lesP~NPtG~i~--dl~~Ia~la~~~gi~lIvDea~ 335 (541)
+.+.+....... .+ ...+|...+. -...+.++|+++|+.+|+.+..
T Consensus 122 d~~~~~~l~~~~-~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~~ 169 (343)
T TIGR03573 122 NPETFRKLQRAY-FK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGEN 169 (343)
T ss_pred CHHHHHHHHHHH-Hh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCCC
Confidence 344444333221 11 2223332222 2557889999999999988663
No 426
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=41.72 E-value=1.1e+02 Score=29.89 Aligned_cols=80 Identities=21% Similarity=0.304 Sum_probs=42.2
Q ss_pred cccCCeEEEEe--CCCCHHHHHHhccCCCceEEEEeCCCCCC--Cc-ccc--HH---HHHHHHHhCC--CEEEEeCCCCC
Q 009167 270 LPKMGITATVI--DPADMEGLEAALNNNNVSLFFTESPTNPF--LR-CVD--VK---LVSDLCHKKG--AIVCIDGTFAT 337 (541)
Q Consensus 270 l~~~Gi~v~~v--d~~d~e~Le~al~~~~tklV~lesP~NPt--G~-i~d--l~---~Ia~la~~~g--i~lIvDea~a~ 337 (541)
.+..|.+.-.. +...++.++..+.. +.+|.+.+.+ |. |. ..+ ++ ++.++.+++| +++.+|.--..
T Consensus 102 ik~~g~k~GlalnP~Tp~~~i~~~l~~--~D~vlvMtV~-PGfgGq~fi~~~lekI~~l~~~~~~~~~~~~I~vdGGI~~ 178 (220)
T PRK08883 102 IKEHGCQAGVVLNPATPLHHLEYIMDK--VDLILLMSVN-PGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGVKV 178 (220)
T ss_pred HHHcCCcEEEEeCCCCCHHHHHHHHHh--CCeEEEEEec-CCCCCceecHhHHHHHHHHHHHHHhcCCCeeEEEECCCCH
Confidence 44455544322 34567888877764 5666665544 43 21 222 33 4444444443 77888864321
Q ss_pred CCcccccccCCcEEE
Q 009167 338 PLNQKALSLGADLVL 352 (541)
Q Consensus 338 ~~~~~~~~~gaDivv 352 (541)
.-.....+.|+|+++
T Consensus 179 eni~~l~~aGAd~vV 193 (220)
T PRK08883 179 DNIREIAEAGADMFV 193 (220)
T ss_pred HHHHHHHHcCCCEEE
Confidence 111233456888766
No 427
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=41.67 E-value=2.5e+02 Score=28.91 Aligned_cols=88 Identities=9% Similarity=0.051 Sum_probs=47.3
Q ss_pred HHHHhccCC--CEEEEc--CCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCC-CCCCCcccc-
Q 009167 241 MLLALVPAG--GHIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP-TNPFLRCVD- 314 (541)
Q Consensus 241 al~all~pG--d~Vlv~--~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP-~NPtG~i~d- 314 (541)
++....+.| -+|++. +|.+.+...+. ..|...|++++++... .+...+..+++..|++-.= -...|.+..
T Consensus 142 ~l~~A~~~g~~~~V~v~EsrP~~~G~~~~a-~~L~~~gI~vtlI~Ds---a~~~~m~~~~vd~VlvGAd~v~~nG~v~nk 217 (303)
T TIGR00524 142 VIRSAWEDGKRIRVIACETRPRNQGSRLTA-WELMQDGIDVTLITDS---MAAYFMQKGEIDAVIVGADRIARNGDVANK 217 (303)
T ss_pred HHHHHHHcCCceEEEECCCCCccchHHHHH-HHHHHCCCCEEEEChh---HHHHHccccCCCEEEEcccEEecCCCEeEh
Confidence 333333444 355554 46665534333 3466679999887532 3333343223666665111 123344433
Q ss_pred --HHHHHHHHHhCCCEEEEe
Q 009167 315 --VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 315 --l~~Ia~la~~~gi~lIvD 332 (541)
--.++-+|+.+++++++=
T Consensus 218 ~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 218 IGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred hhHHHHHHHHHHhCCCEEEe
Confidence 236777889999988863
No 428
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=41.20 E-value=1.7e+02 Score=25.43 Aligned_cols=45 Identities=13% Similarity=0.137 Sum_probs=30.6
Q ss_pred HHHHHhccCCCceEEEEeCCC--CCCCccccHHHHHHHHHhCCCEEEE
Q 009167 286 EGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 286 e~Le~al~~~~tklV~lesP~--NPtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
.++.+.+..+++.+|+. +|+ .......|...|.+.|-+++++++.
T Consensus 60 ~~i~~~i~~g~i~~VIn-t~~~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 60 QQIGALIAEGEIDAVIF-FRDPLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hHHHHHHHcCceeEEEE-cCCCCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 44666776666777654 454 2233255788999999999998874
No 429
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=41.11 E-value=2.6e+02 Score=28.40 Aligned_cols=104 Identities=21% Similarity=0.219 Sum_probs=54.4
Q ss_pred HHHhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEcC--CCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCC
Q 009167 220 SALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNN 295 (541)
Q Consensus 220 A~l~g~e~~i~~sSGs~Ai~~al~all~pGd--~Vlv~~--~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~ 295 (541)
+++....+.|++-+.+.....+|....+.|. +|++.. |.+.|.. + ...|...|++++++.......+-+.
T Consensus 104 ~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~-l-a~eL~~~GI~vtlI~Dsa~~~~m~~---- 177 (275)
T PRK08335 104 SELIDDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLA-L-ANELEFLGIEFEVITDAQLGLFAKE---- 177 (275)
T ss_pred HHHcCCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHH-H-HHHHHHCCCCEEEEeccHHHHHHHh----
Confidence 3444434566665544333444444444453 565554 5555533 3 3446677999988754433333222
Q ss_pred CceEEEE--eCCCCCCCcccc---HHHHHHHHHhCCCEEEE
Q 009167 296 NVSLFFT--ESPTNPFLRCVD---VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 296 ~tklV~l--esP~NPtG~i~d---l~~Ia~la~~~gi~lIv 331 (541)
+..|++ +.. -..|.+.. --.|+-+|+.||+++++
T Consensus 178 -vd~VivGAD~I-~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 178 -ATLALVGADNV-TRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred -CCEEEECccEE-ecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 444444 111 12243332 23677788999998887
No 430
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=40.34 E-value=83 Score=31.55 Aligned_cols=93 Identities=16% Similarity=0.243 Sum_probs=52.4
Q ss_pred EEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCC
Q 009167 229 VIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 307 (541)
Q Consensus 229 i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~N 307 (541)
|++-+|+ ++..++=.-...+++.++++...|+.. .++..+. ++..-..+.+.|.+.++++++++++ -.++
T Consensus 5 ilvlGGT~Dar~la~~L~~~~~~~~~ss~t~~g~~------l~~~~~~-~~~~G~l~~e~l~~~l~e~~i~llI--DATH 75 (257)
T COG2099 5 ILLLGGTSDARALAKKLAAAPVDIILSSLTGYGAK------LAEQIGP-VRVGGFLGAEGLAAFLREEGIDLLI--DATH 75 (257)
T ss_pred EEEEeccHHHHHHHHHhhccCccEEEEEccccccc------chhccCC-eeecCcCCHHHHHHHHHHcCCCEEE--ECCC
Confidence 4444666 666554443344567888888888763 2333333 3333455777787777765565554 2334
Q ss_pred CCCccccHHHHHHHHHhCCCEEEE
Q 009167 308 PFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 308 PtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
|.-..+. +-..++|++.|++.+.
T Consensus 76 PyAa~iS-~Na~~aake~gipy~r 98 (257)
T COG2099 76 PYAARIS-QNAARAAKETGIPYLR 98 (257)
T ss_pred hHHHHHH-HHHHHHHHHhCCcEEE
Confidence 4433332 2345677777776654
No 431
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=40.14 E-value=1.7e+02 Score=29.39 Aligned_cols=89 Identities=11% Similarity=0.111 Sum_probs=44.7
Q ss_pred HHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEE-EeCC-CCHHHHHHhccCCCceEEEEeCCCCCCCcc----cc
Q 009167 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITAT-VIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRC----VD 314 (541)
Q Consensus 242 l~all~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~-~vd~-~d~e~Le~al~~~~tklV~lesP~NPtG~i----~d 314 (541)
+..+.+.| |.|++++..+.-...++ ..++..|+... .+.+ .+.+.++..++.. ...||+.+.+.-||.- .+
T Consensus 108 ~~~~~~aGvdgviipDlp~ee~~~~~-~~~~~~gl~~i~lv~P~T~~eri~~i~~~~-~gfiy~vs~~G~TG~~~~~~~~ 185 (256)
T TIGR00262 108 YAKCKEVGVDGVLVADLPLEESGDLV-EAAKKHGVKPIFLVAPNADDERLKQIAEKS-QGFVYLVSRAGVTGARNRAASA 185 (256)
T ss_pred HHHHHHcCCCEEEECCCChHHHHHHH-HHHHHCCCcEEEEECCCCCHHHHHHHHHhC-CCCEEEEECCCCCCCcccCChh
Confidence 33444444 66777765553322222 34566676644 3333 3456665555432 2366665655666653 12
Q ss_pred HHHHHHHHHh-CCCEEEEe
Q 009167 315 VKLVSDLCHK-KGAIVCID 332 (541)
Q Consensus 315 l~~Ia~la~~-~gi~lIvD 332 (541)
+.+..+..++ .+.++++|
T Consensus 186 ~~~~i~~lr~~~~~pi~vg 204 (256)
T TIGR00262 186 LNELVKRLKAYSAKPVLVG 204 (256)
T ss_pred HHHHHHHHHhhcCCCEEEe
Confidence 3344444443 35666665
No 432
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed
Probab=38.52 E-value=98 Score=34.10 Aligned_cols=110 Identities=20% Similarity=0.165 Sum_probs=59.7
Q ss_pred HHHhccCCCEEEEcCCCCcchH---HHHHhhcccC-CeEEEEeCCCCHHHHHHhccCCCceEEEE-eCCC-CCCCc----
Q 009167 242 LLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFT-ESPT-NPFLR---- 311 (541)
Q Consensus 242 l~all~pGd~Vlv~~~~y~~~~---~~~~~~l~~~-Gi~v~~vd~~d~e~Le~al~~~~tklV~l-esP~-NPtG~---- 311 (541)
+..++..|-.+++-+..|+... ..++.+-..+ ++.+..-+..+.++...+++-. ...|-+ -.|. +-++.
T Consensus 233 a~~L~~agvdvivvD~a~g~~~~vl~~i~~i~~~~p~~~vi~g~v~t~e~a~~l~~aG-ad~i~vg~g~gs~~~~r~~~~ 311 (486)
T PRK05567 233 AEALVEAGVDVLVVDTAHGHSEGVLDRVREIKAKYPDVQIIAGNVATAEAARALIEAG-ADAVKVGIGPGSICTTRIVAG 311 (486)
T ss_pred HHHHHHhCCCEEEEECCCCcchhHHHHHHHHHhhCCCCCEEEeccCCHHHHHHHHHcC-CCEEEECCCCCccccceeecC
Confidence 3445555644555554444322 2232222333 4454444556788777777654 666644 1232 22222
Q ss_pred --cccHH---HHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEE
Q 009167 312 --CVDVK---LVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVL 352 (541)
Q Consensus 312 --i~dl~---~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv 352 (541)
+.+++ ++++.++++++++|.|.=...+. ..+.+.+|+|.++
T Consensus 312 ~g~p~~~~~~~~~~~~~~~~~~viadGGi~~~~di~kAla~GA~~v~ 358 (486)
T PRK05567 312 VGVPQITAIADAAEAAKKYGIPVIADGGIRYSGDIAKALAAGASAVM 358 (486)
T ss_pred CCcCHHHHHHHHHHHhccCCCeEEEcCCCCCHHHHHHHHHhCCCEEE
Confidence 12244 44556667899999997654432 3466788999776
No 433
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=38.23 E-value=2.6e+02 Score=27.56 Aligned_cols=69 Identities=20% Similarity=0.246 Sum_probs=39.7
Q ss_pred CCCCHHHHHHhccCCCceEEEEeCCCCCC--Cccc-c-----HHHHHHHHHhCC--CEEEEeCCCCCCCcccccccCCcE
Q 009167 281 DPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV-D-----VKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADL 350 (541)
Q Consensus 281 d~~d~e~Le~al~~~~tklV~lesP~NPt--G~i~-d-----l~~Ia~la~~~g--i~lIvDea~a~~~~~~~~~~gaDi 350 (541)
+...++.++..+.. +..|.+.+.+ |. |.-. + ++++.++.+++| ..+-+|+--...-.....+.|+|+
T Consensus 127 P~Tp~~~i~~~l~~--vD~VLiMtV~-PGfgGQ~f~~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGaD~ 203 (228)
T PRK08091 127 PETPISLLEPYLDQ--IDLIQILTLD-PRTGTKAPSDLILDRVIQVENRLGNRRVEKLISIDGSMTLELASYLKQHQIDW 203 (228)
T ss_pred CCCCHHHHHHHHhh--cCEEEEEEEC-CCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCCCE
Confidence 44578888888864 5666665543 43 3322 2 344445555554 778899753322112334678998
Q ss_pred EE
Q 009167 351 VL 352 (541)
Q Consensus 351 vv 352 (541)
++
T Consensus 204 ~V 205 (228)
T PRK08091 204 VV 205 (228)
T ss_pred EE
Confidence 76
No 434
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=37.53 E-value=2.4e+02 Score=26.46 Aligned_cols=105 Identities=16% Similarity=0.104 Sum_probs=54.9
Q ss_pred hccCC-CEEEEcCCCCcc-hHHHHHhhcccCCeEEEE--eCCCCHHHHHHhccCCCceEEEEeCCCCCCC---ccccHHH
Q 009167 245 LVPAG-GHIVTTTDCYRK-TRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPFL---RCVDVKL 317 (541)
Q Consensus 245 ll~pG-d~Vlv~~~~y~~-~~~~~~~~l~~~Gi~v~~--vd~~d~e~Le~al~~~~tklV~lesP~NPtG---~i~dl~~ 317 (541)
+.+.| |.|++....... ...++ ..++..|+.+.. ..+.+++++.+++... ...|.+ .|...++ .....+.
T Consensus 73 ~~~aGad~i~~h~~~~~~~~~~~i-~~~~~~g~~~~v~~~~~~t~~e~~~~~~~~-~d~v~~-~~~~~~~~~~~~~~~~~ 149 (202)
T cd04726 73 AFKAGADIVTVLGAAPLSTIKKAV-KAAKKYGKEVQVDLIGVEDPEKRAKLLKLG-VDIVIL-HRGIDAQAAGGWWPEDD 149 (202)
T ss_pred HHhcCCCEEEEEeeCCHHHHHHHH-HHHHHcCCeEEEEEeCCCCHHHHHHHHHCC-CCEEEE-cCcccccccCCCCCHHH
Confidence 33444 666655433221 12223 344556777654 4566777766665543 566555 3432222 2334677
Q ss_pred HHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEE
Q 009167 318 VSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVL 352 (541)
Q Consensus 318 Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv 352 (541)
+.++.+..++++++|.=-...-.......|+|.++
T Consensus 150 i~~~~~~~~~~i~~~GGI~~~~i~~~~~~Gad~vv 184 (202)
T cd04726 150 LKKVKKLLGVKVAVAGGITPDTLPEFKKAGADIVI 184 (202)
T ss_pred HHHHHhhcCCCEEEECCcCHHHHHHHHhcCCCEEE
Confidence 77777657888998854321111223456777654
No 435
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=36.55 E-value=1.6e+02 Score=22.76 Aligned_cols=59 Identities=15% Similarity=0.229 Sum_probs=34.4
Q ss_pred hhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEe
Q 009167 268 TVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 268 ~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvD 332 (541)
.+++..|++++.+... .+.++. . +..+|++ .|.-..-.-.++++|.++.++=|-+||+|
T Consensus 12 ~~L~~~g~~v~~~~~~-~~~l~~---~-~~tll~i-~~~~~~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 12 QLLEEQGVKVERWRKP-YEALEA---D-DGTLLVI-GPDLRLSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHCCCeeEEeccc-HHHhCC---C-CCEEEEE-eCCCCCCchHHHHHHHHHHHcCCEEEEeC
Confidence 5677779988866542 444432 2 3455655 44412111245778999888766666654
No 436
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=35.71 E-value=1.6e+02 Score=23.14 Aligned_cols=53 Identities=15% Similarity=0.139 Sum_probs=29.0
Q ss_pred CeEEEEeCCCCHHHHH--HhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEE
Q 009167 274 GITATVIDPADMEGLE--AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 274 Gi~v~~vd~~d~e~Le--~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
|.++..++.......+ ..++++ .-+|++ + ..|...++.++++.++++|+.+|.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~-d~~i~i-S---~sg~t~~~~~~~~~a~~~g~~ii~ 79 (87)
T cd04795 25 GIEVVALIATELEHASLLSLLRKG-DVVIAL-S---YSGRTEELLAALEIAKELGIPVIA 79 (87)
T ss_pred CCceEEeCCcHHHHHHHHhcCCCC-CEEEEE-E---CCCCCHHHHHHHHHHHHcCCeEEE
Confidence 5555554433322222 233332 334444 3 335556678888999999877653
No 437
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=35.58 E-value=55 Score=30.83 Aligned_cols=47 Identities=19% Similarity=0.256 Sum_probs=36.8
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC--CEEEEeCCCC
Q 009167 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFA 336 (541)
Q Consensus 284 d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g--i~lIvDea~a 336 (541)
|..+++++++.+ ...|++ -+|.+..++++.++++++| +++++|=+.+
T Consensus 12 ~~~~le~~les~-~~~vfl-----L~~~i~~ik~ivk~lK~~gK~vfiHvDLv~G 60 (181)
T COG1954 12 DNKDLEKALESE-SQYVFL-----LTGHILNIKEIVKKLKNRGKTVFIHVDLVEG 60 (181)
T ss_pred hHHHHHHHhcCC-CeEEEE-----EechhhhHHHHHHHHHhCCcEEEEEeHHhcc
Confidence 678889999864 777777 4688999999999999876 5677775543
No 438
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=35.21 E-value=4.1e+02 Score=27.42 Aligned_cols=103 Identities=13% Similarity=0.062 Sum_probs=57.6
Q ss_pred HhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEc--CCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCc
Q 009167 222 LEGAESTVIMASGMSASTVMLLALVPAGG--HIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV 297 (541)
Q Consensus 222 l~g~e~~i~~sSGs~Ai~~al~all~pGd--~Vlv~--~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~t 297 (541)
+....+.|++-+-+.++..++......|. .|++. .|.+.|. .+...|+..|+++..+.. .++-..++. +
T Consensus 116 ~i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~--~~ak~L~~~gI~~~~I~D---sa~~~~~~~--v 188 (301)
T COG1184 116 RIHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGR--IMAKELRQSGIPVTVIVD---SAVGAFMSR--V 188 (301)
T ss_pred hccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHH--HHHHHHHHcCCceEEEec---hHHHHHHHh--C
Confidence 33334677777766666666666666665 45554 3666652 234567888998877642 222233332 4
Q ss_pred eEEEEeCCC-CCCCcccc---HHHHHHHHHhCCCEEEE
Q 009167 298 SLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 298 klV~lesP~-NPtG~i~d---l~~Ia~la~~~gi~lIv 331 (541)
..|++-.=. --.|.++. ---|+..||+.++++++
T Consensus 189 d~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 189 DKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred CEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 455541110 11233333 23678889999988775
No 439
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=34.89 E-value=2.9e+02 Score=26.33 Aligned_cols=88 Identities=15% Similarity=0.117 Sum_probs=53.4
Q ss_pred HHHHHhhcccCCeEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC----CCEEEEeCCCCC
Q 009167 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK----GAIVCIDGTFAT 337 (541)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~----gi~lIvDea~a~ 337 (541)
..++...++..|.++.+...+ .++++.+++.+.++.+|.+.... +.....++++.+..++. ++.+++=.....
T Consensus 99 ~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~--~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~ 176 (201)
T cd02070 99 KNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALM--TTTMGGMKEVIEALKEAGLRDKVKVMVGGAPVN 176 (201)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHCCCCcCCeEEEECCcCC
Confidence 344556788899999876543 57888888766568888884433 22345677777777765 456666433111
Q ss_pred CCcccccccCCcEEEEC
Q 009167 338 PLNQKALSLGADLVLHS 354 (541)
Q Consensus 338 ~~~~~~~~~gaDivv~S 354 (541)
. .-....|+|.+..+
T Consensus 177 ~--~~~~~~GaD~~~~d 191 (201)
T cd02070 177 Q--EFADEIGADGYAED 191 (201)
T ss_pred H--HHHHHcCCcEEECC
Confidence 1 11123467766544
No 440
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=34.46 E-value=2.6e+02 Score=23.74 Aligned_cols=84 Identities=14% Similarity=0.126 Sum_probs=50.2
Q ss_pred HHHHhhcccCCeEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC--CCEEEEeCCCCCCCc
Q 009167 264 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN 340 (541)
Q Consensus 264 ~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~--gi~lIvDea~a~~~~ 340 (541)
..+...++..|.++.+.... ..+.+.+.+.+.++++|.+..-. +.....++.+.++.+++ ++.+++=....+..+
T Consensus 17 ~~~~~~l~~~G~~v~~l~~~~~~~~~~~~i~~~~pdiV~iS~~~--~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~t~~~ 94 (125)
T cd02065 17 NIVAIALRDNGFEVIDLGVDVPPEEIVEAAKEEDADVVGLSALS--TTHMEAMKLVIEALKELGIDIPVVVGGAHPTADP 94 (125)
T ss_pred HHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEEecch--HhHHHHHHHHHHHHHhcCCCCeEEEeCCcCCccc
Confidence 33445677889998887644 45666666655468888884332 11223455666666666 588888666554433
Q ss_pred ccccccCCcEEE
Q 009167 341 QKALSLGADLVL 352 (541)
Q Consensus 341 ~~~~~~gaDivv 352 (541)
.. ...|+++
T Consensus 95 ~~---~~~d~~~ 103 (125)
T cd02065 95 EE---PKVDAVV 103 (125)
T ss_pred cc---cccceee
Confidence 22 3456655
No 441
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=34.04 E-value=96 Score=26.17 Aligned_cols=46 Identities=13% Similarity=0.010 Sum_probs=30.5
Q ss_pred EeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEE
Q 009167 279 VIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 279 ~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
.+..+..+.+..++..+ ++++++ ||...+-+++.++|++++++++.
T Consensus 45 It~gdR~di~~~a~~~~-i~~iIl------tg~~~~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 45 ITPGDREDIQLAAIEAG-IACIIL------TGGLEPSEEVLELAKELGIPVIS 90 (105)
T ss_dssp EEETT-HHHHHHHCCTT-ECEEEE------ETT----HHHHHHHHHHT-EEEE
T ss_pred EEeCCcHHHHHHHHHhC-CCEEEE------eCCCCCCHHHHHHHHHCCCEEEE
Confidence 34455677777788764 888888 35556778999999999988875
No 442
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=33.68 E-value=1.6e+02 Score=24.06 Aligned_cols=43 Identities=12% Similarity=0.078 Sum_probs=27.6
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCCc--cccHHHHHHHHHhCCCEEE
Q 009167 286 EGLEAALNNNNVSLFFTESPTNPFLR--CVDVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 286 e~Le~al~~~~tklV~lesP~NPtG~--i~dl~~Ia~la~~~gi~lI 330 (541)
..+.+.+..+++.+|+. +|. +.+. .-|-..|.+.|-+++++++
T Consensus 45 ~~i~~~i~~g~id~VIn-~~~-~~~~~~~~d~~~iRr~A~~~~Ip~~ 89 (90)
T smart00851 45 LAILDLIKNGEIDLVIN-TLY-PLGAQPHEDGKALRRAAENIDIPGA 89 (90)
T ss_pred HHHHHHhcCCCeEEEEE-CCC-cCcceeccCcHHHHHHHHHcCCCee
Confidence 34566676666777765 443 2122 2356688999999998765
No 443
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=33.44 E-value=2e+02 Score=30.36 Aligned_cols=93 Identities=18% Similarity=0.218 Sum_probs=49.5
Q ss_pred EEeCCHHHHHHHHHHHhccCCC--EEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCC
Q 009167 229 VIMASGMSASTVMLLALVPAGG--HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (541)
Q Consensus 229 i~~sSGs~Ai~~al~all~pGd--~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~ 306 (541)
+++..|.-+- .++..|.+.++ +|++.+..-......... +....++...+|..|.++|++.+++ .++|+-+.|.
T Consensus 2 lvlG~G~vG~-~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~~~~--~dvVin~~gp 77 (386)
T PF03435_consen 2 LVLGAGRVGS-AIARLLARRGPFEEVTVADRNPEKAERLAEK-LLGDRVEAVQVDVNDPESLAELLRG--CDVVINCAGP 77 (386)
T ss_dssp EEE--SHHHH-HHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTT--SSEEEE-SSG
T ss_pred EEEcCcHHHH-HHHHHHhcCCCCCcEEEEECCHHHHHHHHhh-ccccceeEEEEecCCHHHHHHHHhc--CCEEEECCcc
Confidence 4555555332 22234444443 666655433322221111 1334678888899999999999986 4777755543
Q ss_pred CCCCccccHHHHHHHHHhCCCEEEEe
Q 009167 307 NPFLRCVDVKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 307 NPtG~i~dl~~Ia~la~~~gi~lIvD 332 (541)
. .-..|++.|-++|+.. +|
T Consensus 78 ~------~~~~v~~~~i~~g~~y-vD 96 (386)
T PF03435_consen 78 F------FGEPVARACIEAGVHY-VD 96 (386)
T ss_dssp G------GHHHHHHHHHHHT-EE-EE
T ss_pred c------hhHHHHHHHHHhCCCe-ec
Confidence 2 3457888888888764 45
No 444
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=33.37 E-value=1.4e+02 Score=26.81 Aligned_cols=61 Identities=11% Similarity=0.172 Sum_probs=40.3
Q ss_pred HHHHHhhcccCCeEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC
Q 009167 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (541)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~ 325 (541)
..++..+++..|.++.+.-.+ .++++.+++.+.++.+|.+...+. .....++++.+.+++.
T Consensus 20 ~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 20 NKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYG--HGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccc--cCHHHHHHHHHHHHhc
Confidence 344455678889999887644 568887777665688888844442 2334566777777765
No 445
>PLN02274 inosine-5'-monophosphate dehydrogenase
Probab=32.95 E-value=2e+02 Score=31.89 Aligned_cols=109 Identities=19% Similarity=0.171 Sum_probs=64.9
Q ss_pred HHhccCCCEEEEcCCCCcchHH---HHHhhcccC-CeEEEEeCCCCHHHHHHhccCCCceEEEEeC-CC----C--CC--
Q 009167 243 LALVPAGGHIVTTTDCYRKTRI---FIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTES-PT----N--PF-- 309 (541)
Q Consensus 243 ~all~pGd~Vlv~~~~y~~~~~---~~~~~l~~~-Gi~v~~vd~~d~e~Le~al~~~~tklV~les-P~----N--Pt-- 309 (541)
..+++.|-.||+-+..|+-... .++.+-+.+ +..+..-+..+.++-+.+++.. ..+|.+.. +. + .+
T Consensus 254 ~~l~~ag~d~i~iD~~~g~~~~~~~~i~~ik~~~p~~~vi~g~v~t~e~a~~a~~aG-aD~i~vg~g~G~~~~t~~~~~~ 332 (505)
T PLN02274 254 EHLVKAGVDVVVLDSSQGDSIYQLEMIKYIKKTYPELDVIGGNVVTMYQAQNLIQAG-VDGLRVGMGSGSICTTQEVCAV 332 (505)
T ss_pred HHHHHcCCCEEEEeCCCCCcHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHcC-cCEEEECCCCCccccCcccccc
Confidence 4556667555555666654333 333322223 3444434566788888887764 67776621 11 1 12
Q ss_pred C--ccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEE
Q 009167 310 L--RCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (541)
Q Consensus 310 G--~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv 352 (541)
| ...++..+.+++++.+++||.|.-...+ -..+.+..|+|.+.
T Consensus 333 g~~~~~~i~~~~~~~~~~~vpVIadGGI~~~~di~kAla~GA~~V~ 378 (505)
T PLN02274 333 GRGQATAVYKVASIAAQHGVPVIADGGISNSGHIVKALTLGASTVM 378 (505)
T ss_pred CCCcccHHHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 2 2225677888999999999999875543 23456778888665
No 446
>PLN02591 tryptophan synthase
Probab=32.79 E-value=3e+02 Score=27.59 Aligned_cols=91 Identities=15% Similarity=0.145 Sum_probs=53.8
Q ss_pred HHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEEEe-CCC-CHHHHHHhccCCCceEEEEeCCCCCCCccc--
Q 009167 239 TVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI-DPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCV-- 313 (541)
Q Consensus 239 ~~al~all~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v-d~~-d~e~Le~al~~~~tklV~lesP~NPtG~i~-- 313 (541)
...+..+.+.| |-||+++..+.....+. ..++..|+...++ .+. +.+.+++.... ....||+-+-...||.-.
T Consensus 96 ~~F~~~~~~aGv~GviipDLP~ee~~~~~-~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~-~~gFIY~Vs~~GvTG~~~~~ 173 (250)
T PLN02591 96 DKFMATIKEAGVHGLVVPDLPLEETEALR-AEAAKNGIELVLLTTPTTPTERMKAIAEA-SEGFVYLVSSTGVTGARASV 173 (250)
T ss_pred HHHHHHHHHcCCCEEEeCCCCHHHHHHHH-HHHHHcCCeEEEEeCCCCCHHHHHHHHHh-CCCcEEEeeCCCCcCCCcCC
Confidence 33344444455 78888887775443333 4567778876554 233 44556655544 256778766666777632
Q ss_pred --cHHHHHHHHHhC-CCEEEE
Q 009167 314 --DVKLVSDLCHKK-GAIVCI 331 (541)
Q Consensus 314 --dl~~Ia~la~~~-gi~lIv 331 (541)
.++++.+.++++ ++++++
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred chhHHHHHHHHHhcCCCceEE
Confidence 366655566654 677776
No 447
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=32.78 E-value=1.9e+02 Score=28.99 Aligned_cols=101 Identities=14% Similarity=0.132 Sum_probs=50.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCC--EEEEcC--CCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEE
Q 009167 226 ESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (541)
Q Consensus 226 e~~i~~sSGs~Ai~~al~all~pGd--~Vlv~~--~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~ 301 (541)
.+.|++-+-+..+..+|....+.|. +|++.+ |.+.+ ..+. ..+...|+++.++....+ ...+.. ++..|+
T Consensus 108 ~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG-~~~a-~~L~~~gi~v~~i~d~~~---~~~m~~-~vd~Vl 181 (282)
T PF01008_consen 108 GDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEG-RLMA-KELAEAGIPVTLIPDSAV---GYVMPR-DVDKVL 181 (282)
T ss_dssp TEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHH-HTHH-HHHHHTT-EEEEE-GGGH---HHHHHC-TESEEE
T ss_pred CeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhh-hhHH-HHhhhcceeEEEEechHH---HHHHHH-hCCeeE
Confidence 4566666666556666655555552 344433 44444 3333 345667999998764333 333433 144555
Q ss_pred EeCCC-CCCCcccc---HHHHHHHHHhCCCEEEEe
Q 009167 302 TESPT-NPFLRCVD---VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 302 lesP~-NPtG~i~d---l~~Ia~la~~~gi~lIvD 332 (541)
+-.=. -+.|.+.. -..|+-+|+++++++++=
T Consensus 182 iGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 182 IGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp EE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred EeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 52211 23354433 346777889999988874
No 448
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=32.62 E-value=1.4e+02 Score=29.96 Aligned_cols=92 Identities=17% Similarity=0.314 Sum_probs=49.7
Q ss_pred EEeCCHH-HHHHHHHHHhccCCCEEEEcC-CCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCC
Q 009167 229 VIMASGM-SASTVMLLALVPAGGHIVTTT-DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (541)
Q Consensus 229 i~~sSGs-~Ai~~al~all~pGd~Vlv~~-~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~ 306 (541)
|++.+|| ++-.+ ...+.+.|..|+++. ..|+. ..+...|......+..|.+.+.+.+.++++++|+= -+
T Consensus 3 ILvlGGT~egr~l-a~~L~~~g~~v~~s~~t~~~~------~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VID--At 73 (256)
T TIGR00715 3 VLLMGGTVDSRAI-AKGLIAQGIEILVTVTTSEGK------HLYPIHQALTVHTGALDPQELREFLKRHSIDILVD--AT 73 (256)
T ss_pred EEEEechHHHHHH-HHHHHhCCCeEEEEEccCCcc------ccccccCCceEEECCCCHHHHHHHHHhcCCCEEEE--cC
Confidence 4555665 54433 334556676555543 34433 22333443333456667777888887655665542 33
Q ss_pred CCCCccccHHHHHHHHHhCCCEEE
Q 009167 307 NPFLRCVDVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 307 NPtG~i~dl~~Ia~la~~~gi~lI 330 (541)
+|.-..+. +-+.+.|++.|++.+
T Consensus 74 HPfA~~is-~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 74 HPFAAQIT-TNATAVCKELGIPYV 96 (256)
T ss_pred CHHHHHHH-HHHHHHHHHhCCcEE
Confidence 34332221 245677888887665
No 449
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=31.80 E-value=1.3e+02 Score=25.02 Aligned_cols=60 Identities=15% Similarity=0.114 Sum_probs=38.5
Q ss_pred HHhhcccCCeEEEEe--C-CCCH--HHHHHhccCCCceEEEEeCCCCCCCccc--cHHHHHHHHHhCCCEEEEe
Q 009167 266 IETVLPKMGITATVI--D-PADM--EGLEAALNNNNVSLFFTESPTNPFLRCV--DVKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 266 ~~~~l~~~Gi~v~~v--d-~~d~--e~Le~al~~~~tklV~lesP~NPtG~i~--dl~~Ia~la~~~gi~lIvD 332 (541)
+...++++|.+..+. + .... ..|+..+.+ +.+|++-+ +.+- -...+.+.|+++|++++.=
T Consensus 15 ~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~--aD~VIv~t-----~~vsH~~~~~vk~~akk~~ip~~~~ 81 (97)
T PF10087_consen 15 YKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKK--ADLVIVFT-----DYVSHNAMWKVKKAAKKYGIPIIYS 81 (97)
T ss_pred HHHHHHHcCCEEEEEecCCCCccchhHHHHhcCC--CCEEEEEe-----CCcChHHHHHHHHHHHHcCCcEEEE
Confidence 456677889888877 2 2222 347777764 56766622 2221 2567888999999988753
No 450
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=31.36 E-value=2e+02 Score=28.54 Aligned_cols=53 Identities=15% Similarity=0.190 Sum_probs=34.9
Q ss_pred CeEEEEeCCCCHHHHHHhccC----CC-ceEEEEeCCCCCCCccccHHHHHHHHHhCCC
Q 009167 274 GITATVIDPADMEGLEAALNN----NN-VSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 327 (541)
Q Consensus 274 Gi~v~~vd~~d~e~Le~al~~----~~-tklV~lesP~NPtG~i~dl~~Ia~la~~~gi 327 (541)
++++...|..|++.|.++++. .. ...|++..|..+ ........+.+.|++.|+
T Consensus 40 ~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~-~~~~~~~~~i~aa~~~gv 97 (285)
T TIGR03649 40 NEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP-DLAPPMIKFIDFARSKGV 97 (285)
T ss_pred CCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC-ChhHHHHHHHHHHHHcCC
Confidence 566666788899999988841 12 567776666422 223345678888888887
No 451
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=31.21 E-value=43 Score=38.01 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=31.8
Q ss_pred CCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCC
Q 009167 304 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 304 sP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~ 337 (541)
.|++..|..-+++++++.||++||-||+|-+++-
T Consensus 205 Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~H 238 (628)
T COG0296 205 APTSRYGTPEDFKALVDAAHQAGIGVILDWVPNH 238 (628)
T ss_pred cccccCCCHHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 7899999999999999999999999999999764
No 452
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=30.98 E-value=1.9e+02 Score=32.03 Aligned_cols=111 Identities=16% Similarity=0.151 Sum_probs=63.7
Q ss_pred HHHHhccCCCEEEEcCCCCcchH---HHHHhhcccC-CeEEEEeCCCCHHHHHHhccCCCceEEEEe-CCCC------CC
Q 009167 241 MLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PF 309 (541)
Q Consensus 241 al~all~pGd~Vlv~~~~y~~~~---~~~~~~l~~~-Gi~v~~vd~~d~e~Le~al~~~~tklV~le-sP~N------Pt 309 (541)
.+..+++.|-.+|.-+..|+.+. ..++.+-+.+ ++.+..=+..+.++.+.+++.. ...|.+. .|.. .+
T Consensus 245 ~~~~l~~ag~d~i~id~a~G~s~~~~~~i~~ik~~~~~~~v~aG~V~t~~~a~~~~~aG-ad~I~vg~g~Gs~~~t~~~~ 323 (495)
T PTZ00314 245 RAAALIEAGVDVLVVDSSQGNSIYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDAG-ADGLRIGMGSGSICITQEVC 323 (495)
T ss_pred HHHHHHHCCCCEEEEecCCCCchHHHHHHHHHHhhCCCceEEECCcCCHHHHHHHHHcC-CCEEEECCcCCcccccchhc
Confidence 34456777766666555555332 2333332232 3333322455778888887764 6777652 1221 11
Q ss_pred Ccc----ccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEE
Q 009167 310 LRC----VDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVL 352 (541)
Q Consensus 310 G~i----~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv 352 (541)
|.- ..+.+++++|+++|+++|.|.-...+. ..+.+.+|+|.+.
T Consensus 324 ~~g~p~~~ai~~~~~~~~~~~v~vIadGGi~~~~di~kAla~GA~~Vm 371 (495)
T PTZ00314 324 AVGRPQASAVYHVARYARERGVPCIADGGIKNSGDICKALALGADCVM 371 (495)
T ss_pred cCCCChHHHHHHHHHHHhhcCCeEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 111 124577888899999999998654432 3456778999776
No 453
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=30.59 E-value=3.1e+02 Score=27.77 Aligned_cols=17 Identities=18% Similarity=0.077 Sum_probs=8.3
Q ss_pred EEEEEeChHHHHHHHHH
Q 009167 367 AGSISGSGKLVTQIRNL 383 (541)
Q Consensus 367 gG~lv~~~~li~~l~~~ 383 (541)
.|+-+.+++..+++...
T Consensus 210 vGFGIs~~e~~~~v~~~ 226 (265)
T COG0159 210 VGFGISSPEQAAQVAEA 226 (265)
T ss_pred EecCcCCHHHHHHHHHh
Confidence 44445555555544443
No 454
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=30.53 E-value=2e+02 Score=27.95 Aligned_cols=37 Identities=11% Similarity=0.041 Sum_probs=24.5
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHH
Q 009167 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH 323 (541)
Q Consensus 286 e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~ 323 (541)
+.|+++-++.+++.|++ ..+.|.|...++++|.+..+
T Consensus 36 ~~l~~a~~d~~ik~vvL-~~~s~gg~~~~~~el~~~i~ 72 (222)
T cd07018 36 EALEKAAEDDRIKGIVL-DLDGLSGGLAKLEELRQALE 72 (222)
T ss_pred HHHHHHhcCCCeEEEEE-ECCCCCCCHHHHHHHHHHHH
Confidence 34444444446899998 45678888888887776553
No 455
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=30.49 E-value=2.5e+02 Score=29.86 Aligned_cols=53 Identities=9% Similarity=0.196 Sum_probs=35.2
Q ss_pred EeCCCCHHHHHHhccCCCceEEEEeCCCCCC--------Ccccc----HHHHHHHHHhCCCEEEE
Q 009167 279 VIDPADMEGLEAALNNNNVSLFFTESPTNPF--------LRCVD----VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 279 ~vd~~d~e~Le~al~~~~tklV~lesP~NPt--------G~i~d----l~~Ia~la~~~gi~lIv 331 (541)
.+...+++.+.+.+...++++|++.+.++.. |.... +..|.++++++|+.+++
T Consensus 141 l~~e~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 141 LLAETNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred EEccCcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 3445678888888765568999998876432 11221 23577889999976544
No 456
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=30.38 E-value=24 Score=29.38 Aligned_cols=42 Identities=10% Similarity=0.030 Sum_probs=27.2
Q ss_pred HHHhccCCCceEEEEeCCCCCCCccc-cHHHHHHHHHhCCCEEE
Q 009167 288 LEAALNNNNVSLFFTESPTNPFLRCV-DVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 288 Le~al~~~~tklV~lesP~NPtG~i~-dl~~Ia~la~~~gi~lI 330 (541)
+.+.++.+++.+|+. +|..-..... |-..|.+.|-+++++++
T Consensus 52 i~~~i~~~~IdlVIn-~~~~~~~~~~~dg~~irr~a~~~~Ip~~ 94 (95)
T PF02142_consen 52 IMDLIKNGKIDLVIN-TPYPFSDQEHTDGYKIRRAAVEYNIPLF 94 (95)
T ss_dssp HHHHHHTTSEEEEEE-E--THHHHHTHHHHHHHHHHHHTTSHEE
T ss_pred HHHHHHcCCeEEEEE-eCCCCcccccCCcHHHHHHHHHcCCCCc
Confidence 667777666887665 5543222333 66689999999998765
No 457
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=29.73 E-value=1.1e+02 Score=30.77 Aligned_cols=84 Identities=14% Similarity=0.236 Sum_probs=49.7
Q ss_pred cCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC--CCCHHHHHHhccC--CCceEEEEeCCCCCCCccccHHHHHHHH
Q 009167 247 PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--PADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLC 322 (541)
Q Consensus 247 ~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd--~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~dl~~Ia~la 322 (541)
.-||+|+.-+..- ....++.+.|...|+++..+. .+++++|.++++. .+..+|+++.--.|| .|-----.+|
T Consensus 8 ~vG~ElL~G~ivd-tNa~~la~~L~~~G~~v~~~~~VgD~~~~I~~~l~~a~~r~D~vI~tGGLGPT---~DDiT~e~vA 83 (255)
T COG1058 8 AVGDELLSGRIVD-TNAAFLADELTELGVDLARITTVGDNPDRIVEALREASERADVVITTGGLGPT---HDDLTAEAVA 83 (255)
T ss_pred EEccceecCceec-chHHHHHHHHHhcCceEEEEEecCCCHHHHHHHHHHHHhCCCEEEECCCcCCC---ccHhHHHHHH
Confidence 3477777654332 234556677788898887654 5678777776641 137788883333333 3311222345
Q ss_pred HhCCCEEEEeCC
Q 009167 323 HKKGAIVCIDGT 334 (541)
Q Consensus 323 ~~~gi~lIvDea 334 (541)
+..|..++.|+-
T Consensus 84 ka~g~~lv~~~~ 95 (255)
T COG1058 84 KALGRPLVLDEE 95 (255)
T ss_pred HHhCCCcccCHH
Confidence 566778888865
No 458
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=29.48 E-value=4e+02 Score=26.17 Aligned_cols=80 Identities=16% Similarity=0.145 Sum_probs=43.7
Q ss_pred cccCCeEEEE--eCCCCHHHHHHhccCCCceEEEEeCCCCCC--Cccc-c-----HHHHHHHHHhC--CCEEEEeCCCCC
Q 009167 270 LPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV-D-----VKLVSDLCHKK--GAIVCIDGTFAT 337 (541)
Q Consensus 270 l~~~Gi~v~~--vd~~d~e~Le~al~~~~tklV~lesP~NPt--G~i~-d-----l~~Ia~la~~~--gi~lIvDea~a~ 337 (541)
.+..|++.-. -+...++.++..+.. +.+|.+.+.+ |. |.-. + ++++.++.+++ ++.+-+|+--..
T Consensus 106 Ir~~g~k~GlalnP~T~~~~i~~~l~~--vD~VlvMtV~-PGf~GQ~fi~~~l~KI~~l~~~~~~~~~~~~IeVDGGI~~ 182 (223)
T PRK08745 106 IKSHGCQAGLVLNPATPVDILDWVLPE--LDLVLVMSVN-PGFGGQAFIPSALDKLRAIRKKIDALGKPIRLEIDGGVKA 182 (223)
T ss_pred HHHCCCceeEEeCCCCCHHHHHHHHhh--cCEEEEEEEC-CCCCCccccHHHHHHHHHHHHHHHhcCCCeeEEEECCCCH
Confidence 4444554332 244578888888764 6666665543 43 3322 2 34444555554 477889964322
Q ss_pred CCcccccccCCcEEE
Q 009167 338 PLNQKALSLGADLVL 352 (541)
Q Consensus 338 ~~~~~~~~~gaDivv 352 (541)
.-.....+.|+|+++
T Consensus 183 eti~~l~~aGaDi~V 197 (223)
T PRK08745 183 DNIGAIAAAGADTFV 197 (223)
T ss_pred HHHHHHHHcCCCEEE
Confidence 111233466899877
No 459
>smart00642 Aamy Alpha-amylase domain.
Probab=29.48 E-value=49 Score=30.80 Aligned_cols=29 Identities=28% Similarity=0.322 Sum_probs=25.4
Q ss_pred CCCccccHHHHHHHHHhCCCEEEEeCCCC
Q 009167 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 308 PtG~i~dl~~Ia~la~~~gi~lIvDea~a 336 (541)
..|..-+++++++.||++|+.||+|-+..
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 46777889999999999999999998854
No 460
>cd00150 PlantTI Plant trypsin inhibitors such as squash trypsin inhibitor. Plant proteinase inhibitors play important roles in natural plant defense. Proteinase inhibitors from squash seeds form an uniform family of small proteins cross-linked with three disulfide bridges.
Probab=29.42 E-value=25 Score=22.42 Aligned_cols=15 Identities=40% Similarity=0.815 Sum_probs=12.3
Q ss_pred ccccccccCCCCcccccCCCCCC
Q 009167 8 SQKILSFSSSCSSFECRSDPDFS 30 (541)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~ 30 (541)
|||++ .+|..|.|-.
T Consensus 1 CPrIl--------m~Ck~DsDCl 15 (27)
T cd00150 1 CPRIL--------MECKRDSDCL 15 (27)
T ss_pred Ccchh--------eecccccccc
Confidence 78998 8999998853
No 461
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Probab=29.13 E-value=6.7e+02 Score=26.01 Aligned_cols=137 Identities=21% Similarity=0.141 Sum_probs=67.1
Q ss_pred HHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcch---HHHHHhhcccCC--eEEEEeCCCCHH
Q 009167 213 VVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKT---RIFIETVLPKMG--ITATVIDPADME 286 (541)
Q Consensus 213 ~~Le~~LA~l~g~e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~---~~~~~~~l~~~G--i~v~~vd~~d~e 286 (541)
+++++.+.+.-+. -.+....|. .-....+..+++.|=.+|.-+..|+.. ...++. ++..+ +.+..-...+.+
T Consensus 70 ~~~~~~i~~vk~~-l~v~~~~~~~~~~~~~~~~l~eagv~~I~vd~~~G~~~~~~~~i~~-ik~~~p~v~Vi~G~v~t~~ 147 (325)
T cd00381 70 EEQAEEVRKVKGR-LLVGAAVGTREDDKERAEALVEAGVDVIVIDSAHGHSVYVIEMIKF-IKKKYPNVDVIAGNVVTAE 147 (325)
T ss_pred HHHHHHHHHhccC-ceEEEecCCChhHHHHHHHHHhcCCCEEEEECCCCCcHHHHHHHHH-HHHHCCCceEEECCCCCHH
Confidence 5566655555432 122222222 112223445566664444433344332 222322 22222 444432455777
Q ss_pred HHHHhccCCCceEEEEe-CCC------CCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEE
Q 009167 287 GLEAALNNNNVSLFFTE-SPT------NPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (541)
Q Consensus 287 ~Le~al~~~~tklV~le-sP~------NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv 352 (541)
..+++++.. ...|.+. .|. ..+|.-.| +.++.+.++++++++|.|.=...+ -..+.+..|+|.+.
T Consensus 148 ~A~~l~~aG-aD~I~vg~g~G~~~~t~~~~g~g~p~~~~i~~v~~~~~~~~vpVIA~GGI~~~~di~kAla~GA~~Vm 224 (325)
T cd00381 148 AARDLIDAG-ADGVKVGIGPGSICTTRIVTGVGVPQATAVADVAAAARDYGVPVIADGGIRTSGDIVKALAAGADAVM 224 (325)
T ss_pred HHHHHHhcC-CCEEEECCCCCcCcccceeCCCCCCHHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 777777654 7777662 121 11111122 456666777789999988654432 22455667888664
No 462
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=29.12 E-value=82 Score=33.77 Aligned_cols=45 Identities=20% Similarity=0.222 Sum_probs=33.0
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCC
Q 009167 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 286 e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea 334 (541)
+.++.++.+ .+++++.- .--|.+.+.+.+.++|+++|+++++|--
T Consensus 135 ~~~~~~l~~--~~~vVLSD--Y~KG~L~~~q~~I~~ar~~~~pVLvDPK 179 (467)
T COG2870 135 EKIKNALKS--FDALVLSD--YAKGVLTNVQKMIDLAREAGIPVLVDPK 179 (467)
T ss_pred HHHHHHhhc--CCEEEEec--cccccchhHHHHHHHHHHcCCcEEECCC
Confidence 334444443 67787722 2358888899999999999999999954
No 463
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=28.86 E-value=2.8e+02 Score=23.48 Aligned_cols=86 Identities=15% Similarity=0.181 Sum_probs=48.6
Q ss_pred HHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC--CCHHHHHHhccCCCceEEEEeCCCCCCCcccc
Q 009167 237 ASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 314 (541)
Q Consensus 237 Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--~d~e~Le~al~~~~tklV~lesP~NPtG~i~d 314 (541)
.+...+..+.+-|=+|..+. ++..+ ++..|+.+..+.. ..-..+.+.+.++++.+|+. .|+... ...+
T Consensus 14 ~~~~~~~~l~~~G~~l~aT~----gT~~~----l~~~gi~~~~v~~~~~~~~~i~~~i~~~~id~vIn-~~~~~~-~~~~ 83 (110)
T cd01424 14 EAVEIAKRLAELGFKLVATE----GTAKY----LQEAGIPVEVVNKVSEGRPNIVDLIKNGEIQLVIN-TPSGKR-AIRD 83 (110)
T ss_pred HHHHHHHHHHHCCCEEEEch----HHHHH----HHHcCCeEEEEeecCCCchhHHHHHHcCCeEEEEE-CCCCCc-cCcc
Confidence 33344445555566666543 33332 3345777555432 22345666676655666654 444222 2234
Q ss_pred HHHHHHHHHhCCCEEEEe
Q 009167 315 VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 315 l~~Ia~la~~~gi~lIvD 332 (541)
-..|.+.|-++|++++..
T Consensus 84 ~~~iRR~Av~~~ipl~T~ 101 (110)
T cd01424 84 GFSIRRAALEYKVPYFTT 101 (110)
T ss_pred HHHHHHHHHHhCCCEEec
Confidence 558899999999999854
No 464
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=28.71 E-value=2.4e+02 Score=28.13 Aligned_cols=70 Identities=16% Similarity=0.222 Sum_probs=39.9
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC--CC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHH
Q 009167 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (541)
Q Consensus 248 pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd--~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~ 320 (541)
++..+++..+.|. .+++.+|+++..+. .. ++.++.+.++++++++||.|.-.++ +.+..
T Consensus 169 ~~~~~v~~H~af~-------Y~~~~ygl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 234 (266)
T cd01018 169 KQRAFMVYHPAWG-------YFARDYGLTQIPIEEEGKEPSPADLKRLIDLAKEKGVRVVFVQPQFST-------KSAEA 234 (266)
T ss_pred CCCeEEEECchhH-------HHHHHcCCEEEecCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCc-------HHHHH
Confidence 3456666544442 34566777765442 11 3556666666656888888542221 33446
Q ss_pred HHHhCCCEEEE
Q 009167 321 LCHKKGAIVCI 331 (541)
Q Consensus 321 la~~~gi~lIv 331 (541)
++++.|+.++.
T Consensus 235 la~~~g~~v~~ 245 (266)
T cd01018 235 IAREIGAKVVT 245 (266)
T ss_pred HHHHcCCeEEE
Confidence 77788876653
No 465
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated
Probab=28.56 E-value=2.3e+02 Score=30.56 Aligned_cols=111 Identities=16% Similarity=0.147 Sum_probs=61.1
Q ss_pred HHHHhccCCCEEEEcCCCCcchH---HHHHhhcccC-CeEEEEeCCCCHHHHHHhccCCCceEEEEe-CCCC------CC
Q 009167 241 MLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PF 309 (541)
Q Consensus 241 al~all~pGd~Vlv~~~~y~~~~---~~~~~~l~~~-Gi~v~~vd~~d~e~Le~al~~~~tklV~le-sP~N------Pt 309 (541)
-+..+++.|-.||+-+..++... .+++.+-+.+ ++.+..-+..+.+..+.+++-. ...|.+- .|.. .+
T Consensus 157 ~v~~lv~aGvDvI~iD~a~g~~~~~~~~v~~ik~~~p~~~vi~g~V~T~e~a~~l~~aG-aD~I~vG~g~Gs~c~tr~~~ 235 (404)
T PRK06843 157 RVEELVKAHVDILVIDSAHGHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVG-ADCLKVGIGPGSICTTRIVA 235 (404)
T ss_pred HHHHHHhcCCCEEEEECCCCCChhHHHHHHHHHhhCCCCcEEEEecCCHHHHHHHHHcC-CCEEEECCCCCcCCcceeec
Confidence 34456667755555455554322 2232222222 3334333566777777777653 6666552 1211 12
Q ss_pred Cccc----cHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEE
Q 009167 310 LRCV----DVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (541)
Q Consensus 310 G~i~----dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv 352 (541)
|.-. .+..+.+++++.+++||.|.=...+ -..+.+..|+|.|+
T Consensus 236 g~g~p~ltai~~v~~~~~~~~vpVIAdGGI~~~~Di~KALalGA~aVm 283 (404)
T PRK06843 236 GVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 (404)
T ss_pred CCCCChHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 3212 2445677778889999999865443 23466778998775
No 466
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=28.33 E-value=2.7e+02 Score=31.61 Aligned_cols=99 Identities=19% Similarity=0.275 Sum_probs=56.5
Q ss_pred CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHH---hhcccCCeEEEEeCCC-C---HHHHHHhccCCCc
Q 009167 226 ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIE---TVLPKMGITATVIDPA-D---MEGLEAALNNNNV 297 (541)
Q Consensus 226 e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~---~~l~~~Gi~v~~vd~~-d---~e~Le~al~~~~t 297 (541)
+-.+++++|. =.+-.-+-+++.+|=.+|+++ ...+++ ..+...|+.+..++.. + ...+...+.....
T Consensus 34 d~lvvmPTGgGKSlCyQiPAll~~G~TLVVSP-----LiSLM~DQV~~l~~~Gi~A~~lnS~l~~~e~~~v~~~l~~g~~ 108 (590)
T COG0514 34 DTLVVMPTGGGKSLCYQIPALLLEGLTLVVSP-----LISLMKDQVDQLEAAGIRAAYLNSTLSREERQQVLNQLKSGQL 108 (590)
T ss_pred cEEEEccCCCCcchHhhhHHHhcCCCEEEECc-----hHHHHHHHHHHHHHcCceeehhhcccCHHHHHHHHHHHhcCce
Confidence 3334444443 455555667788998888764 233333 2366778888777643 2 3445555555458
Q ss_pred eEEEEeCCCCCCCccccHHHHHHHH-HhCCCEEEEeCCC
Q 009167 298 SLFFTESPTNPFLRCVDVKLVSDLC-HKKGAIVCIDGTF 335 (541)
Q Consensus 298 klV~lesP~NPtG~i~dl~~Ia~la-~~~gi~lIvDea~ 335 (541)
+++|+ +|- ....+ .+.+.. +-.=.++++||++
T Consensus 109 klLyi-sPE---rl~~~--~f~~~L~~~~i~l~vIDEAH 141 (590)
T COG0514 109 KLLYI-SPE---RLMSP--RFLELLKRLPISLVAIDEAH 141 (590)
T ss_pred eEEEE-Cch---hhcCh--HHHHHHHhCCCceEEechHH
Confidence 99999 442 11111 222222 3345689999994
No 467
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=28.27 E-value=1.7e+02 Score=26.41 Aligned_cols=66 Identities=12% Similarity=0.120 Sum_probs=43.4
Q ss_pred CcchHHHHHhhcccCCeEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC
Q 009167 259 YRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 326 (541)
Q Consensus 259 y~~~~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g 326 (541)
|.--.+.+...++..|.++...-.+ .++++.++..+.++.+|-+.+-. +.....++++.+.+++.|
T Consensus 14 HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~--~~~~~~~~~~~~~l~~~g 80 (134)
T TIGR01501 14 HAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLY--GHGEIDCKGLRQKCDEAG 80 (134)
T ss_pred hhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--ccCHHHHHHHHHHHHHCC
Confidence 4333445556788889999876543 56777666655458888884444 334445788888888875
No 468
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=28.10 E-value=2.2e+02 Score=28.66 Aligned_cols=69 Identities=19% Similarity=0.326 Sum_probs=39.2
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC---------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHH
Q 009167 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (541)
Q Consensus 248 pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~I 318 (541)
++..+++..+.|. .+++.+|+++..+.. .++.++.+.++++++++||.|.-.|+ +.+
T Consensus 170 ~~~~~v~~H~af~-------Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 235 (282)
T cd01017 170 KGKTFVTQHAAFG-------YLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASS-------KIA 235 (282)
T ss_pred CCCeEEEecccHH-------HHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 3556776554442 235566777654321 14555666666656888888554332 344
Q ss_pred HHHHHhCCCEEE
Q 009167 319 SDLCHKKGAIVC 330 (541)
Q Consensus 319 a~la~~~gi~lI 330 (541)
..++++.|+.++
T Consensus 236 ~~la~~~g~~v~ 247 (282)
T cd01017 236 ETLAKETGAKLL 247 (282)
T ss_pred HHHHHHcCCcEE
Confidence 456777777654
No 469
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=27.99 E-value=1.8e+02 Score=26.09 Aligned_cols=62 Identities=13% Similarity=0.178 Sum_probs=40.7
Q ss_pred HHHHHhhcccCCeEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC
Q 009167 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 326 (541)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g 326 (541)
.+.+...++..|.++...-.+ .++.+.++..+++..+|.+.+-. +.....++++.+.+++.|
T Consensus 16 kniv~~~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~--t~~~~~~~~~~~~l~~~g 78 (128)
T cd02072 16 NKILDHAFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLY--GHGEIDCKGLREKCDEAG 78 (128)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cCCHHHHHHHHHHHHHCC
Confidence 345556678889998776543 56666665554458888884443 334445778888888765
No 470
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=27.86 E-value=1.5e+02 Score=30.12 Aligned_cols=67 Identities=18% Similarity=0.321 Sum_probs=39.8
Q ss_pred CCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC-C-----C---CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHH
Q 009167 249 GGHIVTTTDCYRKTRIFIETVLPKMGITATVID-P-----A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (541)
Q Consensus 249 Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd-~-----~---d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia 319 (541)
+..+++..+.|. .+++++|+++..+- . . ++.++.+.++++++++||.|.-.++ +.+.
T Consensus 177 ~~~~v~~H~af~-------Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~ 242 (287)
T cd01137 177 KRKLVTSEGAFS-------YFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVND-------RLMK 242 (287)
T ss_pred cCEEEEecccHH-------HHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCCh-------HHHH
Confidence 456776544442 23566777765431 1 1 4556666666657899988554432 4456
Q ss_pred HHHHhCCCEE
Q 009167 320 DLCHKKGAIV 329 (541)
Q Consensus 320 ~la~~~gi~l 329 (541)
.++++.|+.+
T Consensus 243 ~ia~~~gv~v 252 (287)
T cd01137 243 QVAKETGAKI 252 (287)
T ss_pred HHHHHhCCcc
Confidence 7788888765
No 471
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=27.68 E-value=4.1e+02 Score=26.14 Aligned_cols=113 Identities=19% Similarity=0.205 Sum_probs=59.7
Q ss_pred HHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-CCHHHHHHhcc
Q 009167 215 VEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALN 293 (541)
Q Consensus 215 Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~-~d~e~Le~al~ 293 (541)
++..+..+.. -+.++++|..+ +......+...+-. ......+...-..-...++.+|+...+++. .+.+.+...+.
T Consensus 41 l~~~l~~l~~-~d~vvfTS~~a-v~~~~~~l~~~~~~-~~~~~~i~aVG~~Ta~~l~~~G~~~~~~p~~~~~~~l~~~l~ 117 (248)
T COG1587 41 LEVALEDLDS-ADWVVFTSPNA-VRFFFEALKEQGLD-ALKNKKIAAVGEKTAEALRKLGIKVDFIPEDGDSEGLLEELP 117 (248)
T ss_pred HHHHHhcccc-CCEEEEECHHH-HHHHHHHHHhhccc-ccccCeEEEEcHHHHHHHHHhCCCCCcCCCccchHHHHHHhh
Confidence 7777777766 56777777652 33333333333311 111111112112223567788988888765 35555555554
Q ss_pred CC---CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCC
Q 009167 294 NN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 294 ~~---~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~ 337 (541)
.. ..+++++-+.. |. +.|.+-..++|+-+..=++|-.
T Consensus 118 ~~~~~~~~vl~~~~~~---~r----~~l~~~L~~~G~~v~~~~~Y~~ 157 (248)
T COG1587 118 ELLKGGKRVLILRGNG---GR----EVLEEKLEERGAEVREVEVYRT 157 (248)
T ss_pred hhccCCCeEEEEcCCC---ch----HHHHHHHHhCCCEEEEEeeeee
Confidence 32 13666653322 22 5666777788887776666544
No 472
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional
Probab=27.67 E-value=4.8e+02 Score=28.02 Aligned_cols=83 Identities=16% Similarity=0.136 Sum_probs=42.8
Q ss_pred hhcccCCeEEEE--eCCCCH-HHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHH-hCCCEEEEeCCCCCCCcccc
Q 009167 268 TVLPKMGITATV--IDPADM-EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH-KKGAIVCIDGTFATPLNQKA 343 (541)
Q Consensus 268 ~~l~~~Gi~v~~--vd~~d~-e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~-~~gi~lIvDea~a~~~~~~~ 343 (541)
...+..|+.+.. +.+.++ +.++.. .. .+..|.+.+--+|.+.-..++.|.++.+ ..++.+.+|.--...-....
T Consensus 270 ~~akk~GikvgVD~lnp~tp~e~i~~l-~~-~vD~Vllht~vdp~~~~~~~~kI~~ikk~~~~~~I~VdGGI~~eti~~l 347 (391)
T PRK13307 270 HEAQKTGIYSILDMLNVEDPVKLLESL-KV-KPDVVELHRGIDEEGTEHAWGNIKEIKKAGGKILVAVAGGVRVENVEEA 347 (391)
T ss_pred HHHHHcCCEEEEEEcCCCCHHHHHHHh-hC-CCCEEEEccccCCCcccchHHHHHHHHHhCCCCcEEEECCcCHHHHHHH
Confidence 345667776543 223333 444443 33 3677777554455544333455554443 34678888863221111233
Q ss_pred cccCCcEEE
Q 009167 344 LSLGADLVL 352 (541)
Q Consensus 344 ~~~gaDivv 352 (541)
...|+|+++
T Consensus 348 ~~aGADivV 356 (391)
T PRK13307 348 LKAGADILV 356 (391)
T ss_pred HHcCCCEEE
Confidence 456888765
No 473
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=27.19 E-value=2.4e+02 Score=28.87 Aligned_cols=52 Identities=8% Similarity=0.073 Sum_probs=33.2
Q ss_pred eCCCCHHHHHHhccCCCceEEEEeCCC-CCCCcccc-----------HHHHHHHHHhCCCEEEE
Q 009167 280 IDPADMEGLEAALNNNNVSLFFTESPT-NPFLRCVD-----------VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 280 vd~~d~e~Le~al~~~~tklV~lesP~-NPtG~i~d-----------l~~Ia~la~~~gi~lIv 331 (541)
+|..|++.+.+.+++.++.+|+-+... +....-.+ ...|+++|++.|+++|-
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh 97 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH 97 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE
Confidence 456678888888876556777654432 22222222 33789999999987763
No 474
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=26.99 E-value=3.4e+02 Score=29.23 Aligned_cols=75 Identities=20% Similarity=0.247 Sum_probs=40.0
Q ss_pred EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCC
Q 009167 228 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (541)
Q Consensus 228 ~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~ 306 (541)
.++++.|-+++.+ ...+.+.|-.|...+.............+...|+++..-...+++.++..+.+ ..+|++ +|.
T Consensus 3 v~viG~G~sG~s~-a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~--~d~vv~-s~g 77 (459)
T PRK02705 3 AHVIGLGRSGIAA-ARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQ--PDLVVV-SPG 77 (459)
T ss_pred EEEEccCHHHHHH-HHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhc--CCEEEE-CCC
Confidence 4566666666654 45566778888777754332222111234556877754233344444444443 456666 555
No 475
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=26.57 E-value=3.2e+02 Score=29.27 Aligned_cols=76 Identities=14% Similarity=0.117 Sum_probs=42.5
Q ss_pred cCCCEEEEcCCCCcchH-----HHHHhhcccCCeEEEE-eC---CCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHH
Q 009167 247 PAGGHIVTTTDCYRKTR-----IFIETVLPKMGITATV-ID---PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKL 317 (541)
Q Consensus 247 ~pGd~Vlv~~~~y~~~~-----~~~~~~l~~~Gi~v~~-vd---~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~ 317 (541)
++||.|+.+.+.-++.. ......+.+.|+++.. +. ..+-++|...++.-+++.++. .+ |.-..+.+
T Consensus 317 ~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ip--vH---ge~~~~~~ 391 (422)
T TIGR00649 317 RKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIP--VH---GEYRMLIN 391 (422)
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEe--cC---CcHHHHHH
Confidence 47899998887777654 1122134556776533 11 234555555443212454442 13 66556777
Q ss_pred HHHHHHhCCC
Q 009167 318 VSDLCHKKGA 327 (541)
Q Consensus 318 Ia~la~~~gi 327 (541)
.++++++.|+
T Consensus 392 ~~~~a~~~g~ 401 (422)
T TIGR00649 392 HTKLAEEEGY 401 (422)
T ss_pred HHHHHHHcCC
Confidence 7888887764
No 476
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=26.50 E-value=6.7e+02 Score=25.18 Aligned_cols=97 Identities=11% Similarity=-0.033 Sum_probs=51.8
Q ss_pred cEEEeCCHHHHHHHHHHHhccCCCEEEEcC--CCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeC
Q 009167 227 STVIMASGMSASTVMLLALVPAGGHIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTES 304 (541)
Q Consensus 227 ~~i~~sSGs~Ai~~al~all~pGd~Vlv~~--~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~les 304 (541)
+.|++-+.+..+...+.. .+++.+|++.+ |.+.| ..+. ..|...|++++++.... +...+. ++..|++-.
T Consensus 88 dvILT~s~S~~v~~~l~~-~~~~~~V~v~ESrP~~eG-~~~a-~~L~~~GI~vtli~Dsa---~~~~m~--~vd~VlvGA 159 (253)
T PRK06372 88 SVIGTISSSQVLKAFISS-SEKIKSVYILESRPMLEG-IDMA-KLLVKSGIDVVLLTDAS---MCEAVL--NVDAVIVGS 159 (253)
T ss_pred CEEEEeCCcHHHHHHHHh-cCCCCEEEEecCCCchHH-HHHH-HHHHHCCCCEEEEehhH---HHHHHH--hCCEEEECc
Confidence 456555544555555533 33445666654 44555 3333 44666799888774322 222232 255555511
Q ss_pred CC-CCCCcccc---HHHHHHHHHhCCCEEEE
Q 009167 305 PT-NPFLRCVD---VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 305 P~-NPtG~i~d---l~~Ia~la~~~gi~lIv 331 (541)
=. -..|.+.. -..++-.|+++++++++
T Consensus 160 d~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 160 DSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred cEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 11 12344443 23677788999998887
No 477
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=26.40 E-value=1.6e+02 Score=29.41 Aligned_cols=39 Identities=15% Similarity=0.279 Sum_probs=24.6
Q ss_pred CCceEEEEeCCCCCC-----C--cccc--------HHHHHHHHHhCCCEEEEeC
Q 009167 295 NNVSLFFTESPTNPF-----L--RCVD--------VKLVSDLCHKKGAIVCIDG 333 (541)
Q Consensus 295 ~~tklV~lesP~NPt-----G--~i~d--------l~~Ia~la~~~gi~lIvDe 333 (541)
.++++|++.+...+. | .... +..|..+|++|++.||+=|
T Consensus 132 ~~ikLIVIDSIaalfr~e~~~~~~~~~R~~~L~~~~~~L~~lA~~~~iaVvvTN 185 (256)
T PF08423_consen 132 SKIKLIVIDSIAALFRSEFSGRGDLAERQRMLARLARILKRLARKYNIAVVVTN 185 (256)
T ss_dssp SCEEEEEEETSSHHHHHHSGSTTTHHHHHHHHHHHHHHHHHHHHHTT-EEEEEE
T ss_pred cceEEEEecchHHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHhCCceEEeec
Confidence 369999999987542 1 1111 2257778889998777643
No 478
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=26.34 E-value=1.1e+02 Score=27.93 Aligned_cols=49 Identities=18% Similarity=0.239 Sum_probs=37.6
Q ss_pred HHHHHhccCCCce-EEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCC
Q 009167 286 EGLEAALNNNNVS-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 286 e~Le~al~~~~tk-lV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea 334 (541)
.+|-+.+..+++. +||+.-|-++-..-.|++.|.++|.-||+++-..-+
T Consensus 63 qQIga~Ia~g~id~vIFf~DPl~~~phepDi~aLlRlc~v~nIP~AtN~a 112 (143)
T TIGR00160 63 QQIGALIAEGKIDAVIFFWDPLNAQPHEPDVKALLRLCTVWNIPLATNVA 112 (143)
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCCCCcCHHHHHHHHHhhCcccccCHH
Confidence 4455555444444 678888988888889999999999999999876544
No 479
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=26.15 E-value=5.9e+02 Score=24.42 Aligned_cols=92 Identities=15% Similarity=0.179 Sum_probs=52.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-CHHHHHHhccCCCceEEEEeC
Q 009167 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTES 304 (541)
Q Consensus 226 e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~les 304 (541)
..++++++|..|... +..|++.|-+|.+-++...... ..+..... +.++... +.+. +.. ..+|++ .
T Consensus 10 k~vlVvGgG~va~rk-~~~Ll~~ga~VtVvsp~~~~~l---~~l~~~~~--i~~~~~~~~~~d----l~~--~~lVi~-a 76 (205)
T TIGR01470 10 RAVLVVGGGDVALRK-ARLLLKAGAQLRVIAEELESEL---TLLAEQGG--ITWLARCFDADI----LEG--AFLVIA-A 76 (205)
T ss_pred CeEEEECcCHHHHHH-HHHHHHCCCEEEEEcCCCCHHH---HHHHHcCC--EEEEeCCCCHHH----hCC--cEEEEE-C
Confidence 468888888877554 3566777877776666654322 22222223 3333321 2222 322 456666 4
Q ss_pred CCCCCCccccHHHHHHHHHhCCCEEE-EeCC
Q 009167 305 PTNPFLRCVDVKLVSDLCHKKGAIVC-IDGT 334 (541)
Q Consensus 305 P~NPtG~i~dl~~Ia~la~~~gi~lI-vDea 334 (541)
++++. .-+.|.+.|++.|+++- +|+.
T Consensus 77 t~d~~----ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 77 TDDEE----LNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred CCCHH----HHHHHHHHHHHcCCEEEECCCc
Confidence 44331 13578999999998873 5654
No 480
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Ralstonia eutropha (Alcaligenes eutrophus) two copies of the gene coding for PPE are known [], one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process; PDB: 3CTL_A 3CT7_D 3CU2_A 1RPX_A 3OVR_A 3OVP_A 3OVQ_B 3QC3_B 3INP_A 1TQJ_D ....
Probab=26.00 E-value=1.5e+02 Score=28.61 Aligned_cols=81 Identities=20% Similarity=0.242 Sum_probs=44.8
Q ss_pred cccCCeEEE--EeCCCCHHHHHHhccCCCceEEEEeCCCCC--CCcccc------HHHHHHHHHh--CCCEEEEeCCCCC
Q 009167 270 LPKMGITAT--VIDPADMEGLEAALNNNNVSLFFTESPTNP--FLRCVD------VKLVSDLCHK--KGAIVCIDGTFAT 337 (541)
Q Consensus 270 l~~~Gi~v~--~vd~~d~e~Le~al~~~~tklV~lesP~NP--tG~i~d------l~~Ia~la~~--~gi~lIvDea~a~ 337 (541)
.+..|+++- .-+...++.++..+.. +..|.+.+.+ | .|.... ++++.++..+ +++.+.+|+--..
T Consensus 101 ik~~g~k~GialnP~T~~~~~~~~l~~--vD~VlvMsV~-PG~~Gq~f~~~~~~KI~~l~~~~~~~~~~~~I~vDGGI~~ 177 (201)
T PF00834_consen 101 IKEAGIKAGIALNPETPVEELEPYLDQ--VDMVLVMSVE-PGFGGQKFIPEVLEKIRELRKLIPENGLDFEIEVDGGINE 177 (201)
T ss_dssp HHHTTSEEEEEE-TTS-GGGGTTTGCC--SSEEEEESS--TTTSSB--HGGHHHHHHHHHHHHHHHTCGSEEEEESSEST
T ss_pred HHHhCCCEEEEEECCCCchHHHHHhhh--cCEEEEEEec-CCCCcccccHHHHHHHHHHHHHHHhcCCceEEEEECCCCH
Confidence 444555532 2344567888877763 7888887764 5 344332 4455555555 5699999986443
Q ss_pred CCcccccccCCcEEEE
Q 009167 338 PLNQKALSLGADLVLH 353 (541)
Q Consensus 338 ~~~~~~~~~gaDivv~ 353 (541)
.-.....+.|+|+++.
T Consensus 178 ~~~~~~~~aGad~~V~ 193 (201)
T PF00834_consen 178 ENIKQLVEAGADIFVA 193 (201)
T ss_dssp TTHHHHHHHT--EEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 3333445678997763
No 481
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=25.82 E-value=1.2e+02 Score=29.26 Aligned_cols=62 Identities=16% Similarity=0.223 Sum_probs=40.2
Q ss_pred HHHHhhcccCCeEEEEe-CC-CC----HHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEE
Q 009167 264 IFIETVLPKMGITATVI-DP-AD----MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 264 ~~~~~~l~~~Gi~v~~v-d~-~d----~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
..++..++..|.++.++ +. .| .+.++.++..+ +.+|++.... ++. ...+.+.|++.|++||.
T Consensus 18 ~g~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~-~d~Iiv~~~~-~~~----~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 18 KGAKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQG-VDGIIVSPVD-PDS----LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTT-ESEEEEESSS-TTT----THHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhc-CCEEEecCCC-HHH----HHHHHHHHhhcCceEEE
Confidence 33455667788888875 43 34 45566777764 8898884443 432 33556668888998886
No 482
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=25.81 E-value=2.2e+02 Score=29.43 Aligned_cols=87 Identities=22% Similarity=0.283 Sum_probs=49.5
Q ss_pred HHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHh----CCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCC
Q 009167 288 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK----KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHN 363 (541)
Q Consensus 288 Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~----~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~g 363 (541)
|+++....+++.|++ -.|.|.|.+..-+.|++..++ +-+++.+++.-+++- -.....+|-++.+-+-..|.
T Consensus 89 l~~~~~~~~vk~vvL-~inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AASGG--Y~IA~aAd~I~a~p~si~GS-- 163 (317)
T COG0616 89 LRAARADPSVKAVVL-RINSPGGSVVASELIARALKRLRAKKPVVVSVGGYAASGG--YYIALAADKIVADPSSITGS-- 163 (317)
T ss_pred HHHHhcCCCCceEEE-EEECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeecchh--hhhhccCCEEEecCCceeee--
Confidence 333333335787777 678888999886655554443 337777777654431 12334566555554445542
Q ss_pred CceEEEEEeChHHHHHHHH
Q 009167 364 DVLAGSISGSGKLVTQIRN 382 (541)
Q Consensus 364 d~~gG~lv~~~~li~~l~~ 382 (541)
.|++...+.+.+.+.+
T Consensus 164 ---IGVi~~~~~~~~l~~k 179 (317)
T COG0616 164 ---IGVISGAPNFEELLEK 179 (317)
T ss_pred ---ceeEEecCCHHHHHHh
Confidence 4666666555554443
No 483
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=25.65 E-value=6.2e+02 Score=27.54 Aligned_cols=90 Identities=12% Similarity=0.155 Sum_probs=50.8
Q ss_pred hccCCCE-EEEcCCCCc-chHHHHHhhcccCCeEEEEeCCCCHHHHHHhcc---C-CCceEEEEeCCCCCCCccccHHHH
Q 009167 245 LVPAGGH-IVTTTDCYR-KTRIFIETVLPKMGITATVIDPADMEGLEAALN---N-NNVSLFFTESPTNPFLRCVDVKLV 318 (541)
Q Consensus 245 ll~pGd~-Vlv~~~~y~-~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~---~-~~tklV~lesP~NPtG~i~dl~~I 318 (541)
+...|-. .++..+.|. +....+.......|+.+... .+++++.+++. . .+..+|++.++....-....++++
T Consensus 265 L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~--~d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~~lm~EL 342 (436)
T PRK11889 265 FHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV--RDEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEEM 342 (436)
T ss_pred HHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEec--CCHHHHHHHHHHHHhccCCCEEEEeCccccCcCHHHHHHH
Confidence 4455643 355555664 33444545556677776543 35666666653 1 125799998886322222235555
Q ss_pred HHHHHh---CCCEEEEeCCCC
Q 009167 319 SDLCHK---KGAIVCIDGTFA 336 (541)
Q Consensus 319 a~la~~---~gi~lIvDea~a 336 (541)
.++.+. +.++|++|.+..
T Consensus 343 ~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 343 IETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred HHHHhhcCCCeEEEEECCccC
Confidence 555543 567888988743
No 484
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length. The function of this family is unknown.
Probab=25.62 E-value=6.1e+02 Score=24.89 Aligned_cols=121 Identities=18% Similarity=0.205 Sum_probs=66.2
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEe-CCHH-HHHHHHHHH-hccCCCEEEEcCCCCcchHHHHHhhcccCCeE--EEEeC
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIM-ASGM-SASTVMLLA-LVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVID 281 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~-sSGs-~Ai~~al~a-ll~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~--v~~vd 281 (541)
+..|...+|-.+||.=.++.-.+.+ ++|. .+..++|.+ --+.|.++++--|....... ....+...|.. +.++-
T Consensus 24 ~~ep~~aEfISAlAAG~nAkliVe~~s~g~~~~ttiaLaaAAr~TgGR~vCIvp~~~~~~~-~~~~l~~~~~~~~vEfvv 102 (218)
T PF07279_consen 24 FKEPGVAEFISALAAGWNAKLIVEAWSSGGAISTTIALAAAARQTGGRHVCIVPDEQSLSE-YKKALGEAGLSDVVEFVV 102 (218)
T ss_pred cCCCCHHHHHHHHhccccceEEEEEecCCCchHhHHHHHHHHHhcCCeEEEEcCChhhHHH-HHHHHhhccccccceEEe
Confidence 3467777887777775555444444 4443 222333322 23556777776666655322 23344444543 34443
Q ss_pred CCCHHHHHHhccCCCceEEEEeCCCCCCCccccHH-HHHHHHH--hCCCEEEEeCCCC
Q 009167 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK-LVSDLCH--KKGAIVCIDGTFA 336 (541)
Q Consensus 282 ~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~-~Ia~la~--~~gi~lIvDea~a 336 (541)
.+.++++...+. +...+++..= .-+.. ++.++++ .+|.+||.+|++.
T Consensus 103 g~~~e~~~~~~~--~iDF~vVDc~------~~d~~~~vl~~~~~~~~GaVVV~~Na~~ 152 (218)
T PF07279_consen 103 GEAPEEVMPGLK--GIDFVVVDCK------REDFAARVLRAAKLSPRGAVVVCYNAFS 152 (218)
T ss_pred cCCHHHHHhhcc--CCCEEEEeCC------chhHHHHHHHHhccCCCceEEEEecccc
Confidence 445666555554 3677777322 23444 6666655 3689999999965
No 485
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=25.60 E-value=3.7e+02 Score=27.90 Aligned_cols=97 Identities=18% Similarity=0.189 Sum_probs=53.2
Q ss_pred EEEeCCHHHHH-HHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEE-----
Q 009167 228 TVIMASGMSAS-TVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF----- 301 (541)
Q Consensus 228 ~i~~sSGs~Ai-~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~----- 301 (541)
.|++++|..=| .-....|++.|-.|++-+....+....+... .++...-|..|-+.|.+.+.++++.+|+
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc----cCceEEeccccHHHHHHHHHhcCCCEEEECccc
Confidence 35666665211 2334556778877777666665655333221 1345556777888888888765555443
Q ss_pred ---EeCCCCCCC----ccccHHHHHHHHHhCCCE
Q 009167 302 ---TESPTNPFL----RCVDVKLVSDLCHKKGAI 328 (541)
Q Consensus 302 ---lesP~NPtG----~i~dl~~Ia~la~~~gi~ 328 (541)
=|+..+|.- .+.---.|.+.++++|+.
T Consensus 78 ~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~ 111 (329)
T COG1087 78 ISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK 111 (329)
T ss_pred cccchhhhCHHHHHhhchHhHHHHHHHHHHhCCC
Confidence 233333321 111122667778888763
No 486
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=25.34 E-value=1.1e+02 Score=27.58 Aligned_cols=56 Identities=18% Similarity=0.197 Sum_probs=39.5
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCCccccH----HHHHH-HHHhC-CCEEE-EeCCCCCC
Q 009167 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV----KLVSD-LCHKK-GAIVC-IDGTFATP 338 (541)
Q Consensus 283 ~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl----~~Ia~-la~~~-gi~lI-vDea~a~~ 338 (541)
.+.+.|.+.+++.++..|++-.|-|..|..-+. .+.++ +.++. ++.|+ +||-+.+.
T Consensus 38 ~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT~ 100 (135)
T PF03652_consen 38 KDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTTK 100 (135)
T ss_dssp CCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSHH
T ss_pred hHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhHH
Confidence 478899999887778999999999888887662 33333 33344 77654 89987653
No 487
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=25.23 E-value=5.5e+02 Score=25.85 Aligned_cols=43 Identities=23% Similarity=0.159 Sum_probs=29.2
Q ss_pred CCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEEC
Q 009167 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHS 354 (541)
Q Consensus 308 PtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S 354 (541)
-.|..-.+-++++.++++|+.+|. -+.....|+..-+|+++..
T Consensus 186 ~sG~t~e~i~~a~~ak~~ga~vIa----iT~~~~spla~~Ad~~L~~ 228 (281)
T COG1737 186 FSGYTREIVEAAELAKERGAKVIA----ITDSADSPLAKLADIVLLV 228 (281)
T ss_pred CCCCcHHHHHHHHHHHHCCCcEEE----EcCCCCCchhhhhceEEec
Confidence 357777888999999999987774 1222345555557777644
No 488
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=25.13 E-value=4.4e+02 Score=28.28 Aligned_cols=107 Identities=19% Similarity=0.237 Sum_probs=62.6
Q ss_pred cEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCC
Q 009167 227 STVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (541)
Q Consensus 227 ~~i~~sSGs~Ai~~al~all~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP 305 (541)
.+++.++|.-+-.. ...+.+.| ..|.+.+-+-....+.... ....++...+|..|.+++.++|++ ..+|+-.-|
T Consensus 3 ~ilviGaG~Vg~~v-a~~la~~~d~~V~iAdRs~~~~~~i~~~--~~~~v~~~~vD~~d~~al~~li~~--~d~VIn~~p 77 (389)
T COG1748 3 KILVIGAGGVGSVV-AHKLAQNGDGEVTIADRSKEKCARIAEL--IGGKVEALQVDAADVDALVALIKD--FDLVINAAP 77 (389)
T ss_pred cEEEECCchhHHHH-HHHHHhCCCceEEEEeCCHHHHHHHHhh--ccccceeEEecccChHHHHHHHhc--CCEEEEeCC
Confidence 46778877744332 23344555 4565555443332221111 112577888899999999999986 377776666
Q ss_pred CCCCCccc------------------cHHHHHHHHHhCCCEEEEeCCCCCC
Q 009167 306 TNPFLRCV------------------DVKLVSDLCHKKGAIVCIDGTFATP 338 (541)
Q Consensus 306 ~NPtG~i~------------------dl~~Ia~la~~~gi~lIvDea~a~~ 338 (541)
..-+-.++ +..++.+.|++.|+..|.+.=+..+
T Consensus 78 ~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPG 128 (389)
T COG1748 78 PFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPG 128 (389)
T ss_pred chhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcc
Confidence 53332222 1235667777888888877655544
No 489
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=25.03 E-value=3.2e+02 Score=29.67 Aligned_cols=99 Identities=12% Similarity=0.173 Sum_probs=54.8
Q ss_pred HHHHHHHHhccCCCEE-EEcCCCCcch-HHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc
Q 009167 237 ASTVMLLALVPAGGHI-VTTTDCYRKT-RIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 314 (541)
Q Consensus 237 Ai~~al~all~pGd~V-lv~~~~y~~~-~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d 314 (541)
+..++.......|..| +++...|... ...+.......|+.+.. ..++..+.+.+...+..+|++.++..+.-....
T Consensus 240 aaKLA~~~~~~~G~~V~Lit~Dt~R~aA~eQLk~yAe~lgvp~~~--~~~~~~l~~~l~~~~~D~VLIDTaGr~~rd~~~ 317 (432)
T PRK12724 240 IAKLAAKYFLHMGKSVSLYTTDNYRIAAIEQLKRYADTMGMPFYP--VKDIKKFKETLARDGSELILIDTAGYSHRNLEQ 317 (432)
T ss_pred HHHHHHHHHHhcCCeEEEecccchhhhHHHHHHHHHHhcCCCeee--hHHHHHHHHHHHhCCCCEEEEeCCCCCccCHHH
Confidence 4444433334556554 4555566542 22333344555665432 234555555554334688999987654444455
Q ss_pred HHHHHHHHHh------CCCEEEEeCCCCC
Q 009167 315 VKLVSDLCHK------KGAIVCIDGTFAT 337 (541)
Q Consensus 315 l~~Ia~la~~------~gi~lIvDea~a~ 337 (541)
++++.++.+. ...+||+|.+...
T Consensus 318 l~eL~~~~~~~~~~~~~e~~LVLsAt~~~ 346 (432)
T PRK12724 318 LERMQSFYSCFGEKDSVENLLVLSSTSSY 346 (432)
T ss_pred HHHHHHHHHhhcCCCCCeEEEEEeCCCCH
Confidence 6666666653 3578999988653
No 490
>PRK14057 epimerase; Provisional
Probab=24.96 E-value=4.6e+02 Score=26.38 Aligned_cols=69 Identities=19% Similarity=0.222 Sum_probs=41.1
Q ss_pred CCCCHHHHHHhccCCCceEEEEeCCCCCC--Cccc-c-----HHHHHHHHHhCC--CEEEEeCCCCCCCcccccccCCcE
Q 009167 281 DPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV-D-----VKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADL 350 (541)
Q Consensus 281 d~~d~e~Le~al~~~~tklV~lesP~NPt--G~i~-d-----l~~Ia~la~~~g--i~lIvDea~a~~~~~~~~~~gaDi 350 (541)
+...++.++..+.. +.+|.+.+.+ |. |.-. + ++++.++.+++| +.+-+|.-....-.....+.|+|+
T Consensus 141 P~Tp~e~i~~~l~~--vD~VLvMtV~-PGfgGQ~Fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGad~ 217 (254)
T PRK14057 141 PATPLDVIIPILSD--VEVIQLLAVN-PGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGIDR 217 (254)
T ss_pred CCCCHHHHHHHHHh--CCEEEEEEEC-CCCCchhccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCCCE
Confidence 45678888888864 6666665554 43 3322 2 344445555554 788999754322222345678998
Q ss_pred EE
Q 009167 351 VL 352 (541)
Q Consensus 351 vv 352 (541)
++
T Consensus 218 ~V 219 (254)
T PRK14057 218 VV 219 (254)
T ss_pred EE
Confidence 77
No 491
>PLN02672 methionine S-methyltransferase
Probab=24.91 E-value=3.7e+02 Score=32.87 Aligned_cols=117 Identities=12% Similarity=0.071 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHh------ccCCCEEEEcCCCCcchHHHHHhh-------
Q 009167 211 TTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLAL------VPAGGHIVTTTDCYRKTRIFIETV------- 269 (541)
Q Consensus 211 ~~~~Le~~LA~l~g--------~e~~i~~sSGs~Ai~~al~al------l~pGd~Vlv~~~~y~~~~~~~~~~------- 269 (541)
....+|+.||.++. .+.+++++|-..||..+++.+ +..+. +.... ..++..+
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~ 499 (1082)
T PLN02672 427 GSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHL----TRWLP---KKWLTSLAIENATS 499 (1082)
T ss_pred cchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhh----hccCC---HHHHhHhhhhcccc
Confidence 45678999998763 257889999999998888643 22221 11111 1122111
Q ss_pred cccCCeEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCC
Q 009167 270 LPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 270 l~~~Gi~v~~vd~-~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea 334 (541)
....+..++.+.. ..-+.+.+.+++-++++|+...-.-..-+..-++.|.+.+++.|+.++.|..
T Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 500 DSKSDDVITVIEAPRQSDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred cCccCCeEEEEeCCCcchHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehh
Confidence 1112233333331 1223444555544577887744442222333477888999999999999987
No 492
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=24.89 E-value=52 Score=32.75 Aligned_cols=63 Identities=22% Similarity=0.241 Sum_probs=38.6
Q ss_pred hcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCC
Q 009167 269 VLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 269 ~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~ 335 (541)
.++.+|++..++.+.-... .. -....+.=. ..++.-.|...+++++++.||++|+.||+|-+.
T Consensus 12 yl~~lGv~~I~l~Pi~~~~-~~-~~gY~~~d~--~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 12 YLKDLGVNAIWLSPIFESP-NG-YHGYDPSDY--YAVDPRFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp HHHHHTESEEEESS-EESS-SS-TTTTSESEE--EEESTTTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred HHHHcCCCceecccccccc-cc-cccccceee--eccccccchhhhhhhhhhccccccceEEEeeec
Confidence 4666788877775431100 00 000112111 123445788889999999999999999999884
No 493
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=24.89 E-value=3.6e+02 Score=26.12 Aligned_cols=42 Identities=24% Similarity=0.237 Sum_probs=29.0
Q ss_pred CCHHH---HHHhccCCCceEEEEeCCCCCCCcc-ccHHHHHHHHHh
Q 009167 283 ADMEG---LEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHK 324 (541)
Q Consensus 283 ~d~e~---Le~al~~~~tklV~lesP~NPtG~i-~dl~~Ia~la~~ 324 (541)
.|++. |.+++...++.+|+-....|+||.- .|-..+.++|.+
T Consensus 120 tdp~~~~ki~e~lp~r~VdvVlSDMapnaTGvr~~Dh~~~i~LC~s 165 (232)
T KOG4589|consen 120 TDPETYRKIFEALPNRPVDVVLSDMAPNATGVRIRDHYRSIELCDS 165 (232)
T ss_pred CCHHHHHHHHHhCCCCcccEEEeccCCCCcCcchhhHHHHHHHHHH
Confidence 35543 4444544357788877778999954 578899999975
No 494
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=24.76 E-value=1.4e+02 Score=25.36 Aligned_cols=31 Identities=19% Similarity=0.319 Sum_probs=14.8
Q ss_pred EEEEeCCCCCCCccccHHHHHHHHHhCCCEEEE
Q 009167 299 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 299 lV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
-|++|-|-- ....+.++|.++++++|..+.+
T Consensus 88 ~v~~EKP~~--~~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 88 HVLVEKPLA--LTLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp EEEEESSSS--SSHHHHHHHHHHHHHHTSCEEE
T ss_pred EEEEEcCCc--CCHHHHHHHHHHHHHhCCEEEE
Confidence 444554441 2233455555555555555443
No 495
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=24.69 E-value=2.8e+02 Score=30.55 Aligned_cols=112 Identities=17% Similarity=0.122 Sum_probs=62.3
Q ss_pred HHHHHhccCCCEEEEcCCCCcchHHH---HHhhcccC-CeEEEEeCCCCHHHHHHhccCCCceEEE-------EeCCCCC
Q 009167 240 VMLLALVPAGGHIVTTTDCYRKTRIF---IETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFF-------TESPTNP 308 (541)
Q Consensus 240 ~al~all~pGd~Vlv~~~~y~~~~~~---~~~~l~~~-Gi~v~~vd~~d~e~Le~al~~~~tklV~-------lesP~NP 308 (541)
..+..++..|-.+|+-+..|+..... ++.+-+.+ ++.+.-=+..+.+..+.+++.. ..+|- +|+-...
T Consensus 230 ~~a~~Lv~aGvd~i~~D~a~~~~~~~~~~i~~ik~~~p~~~v~agnv~t~~~a~~l~~aG-ad~v~vgig~gsictt~~~ 308 (479)
T PRK07807 230 AKARALLEAGVDVLVVDTAHGHQEKMLEALRAVRALDPGVPIVAGNVVTAEGTRDLVEAG-ADIVKVGVGPGAMCTTRMM 308 (479)
T ss_pred HHHHHHHHhCCCEEEEeccCCccHHHHHHHHHHHHHCCCCeEEeeccCCHHHHHHHHHcC-CCEEEECccCCcccccccc
Confidence 34455666776666667777653332 22222223 3444322556777777777653 44443 2233344
Q ss_pred CCcccc-HH---HHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEE
Q 009167 309 FLRCVD-VK---LVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (541)
Q Consensus 309 tG~i~d-l~---~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv 352 (541)
||.-.| +. ++++.|+++++++|.|.-...+ -..+.+..|+|.++
T Consensus 309 ~~~~~p~~~av~~~~~~~~~~~~~via~ggi~~~~~~~~al~~ga~~v~ 357 (479)
T PRK07807 309 TGVGRPQFSAVLECAAAARELGAHVWADGGVRHPRDVALALAAGASNVM 357 (479)
T ss_pred cCCchhHHHHHHHHHHHHHhcCCcEEecCCCCCHHHHHHHHHcCCCeee
Confidence 554434 44 4445555889999999864433 23456677888665
No 496
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=24.60 E-value=4.3e+02 Score=25.07 Aligned_cols=42 Identities=14% Similarity=0.013 Sum_probs=28.0
Q ss_pred CCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEE
Q 009167 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLH 353 (541)
Q Consensus 308 PtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~ 353 (541)
..|...++-++++.|+++|+.+|.= +.....++..-+|+++.
T Consensus 120 ~SG~t~~~i~~~~~ak~~g~~iI~i----T~~~~s~l~~~ad~~l~ 161 (192)
T PRK00414 120 TSGNSGNIIKAIEAARAKGMKVITL----TGKDGGKMAGLADIEIR 161 (192)
T ss_pred CCCCCHHHHHHHHHHHHCCCeEEEE----eCCCCChhHHhCCEEEE
Confidence 3577778889999999999888752 22233444444676664
No 497
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=24.42 E-value=2.3e+02 Score=24.24 Aligned_cols=65 Identities=20% Similarity=0.234 Sum_probs=43.8
Q ss_pred HHHHhhcccCCeE-EEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCC
Q 009167 264 IFIETVLPKMGIT-ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 264 ~~~~~~l~~~Gi~-v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea 334 (541)
..+..+.+++|+. +.++.+.--|.-.-.|+.- +-.|++-.+.| .+++-|..+|+++|+.+.++.-
T Consensus 23 ~~v~~i~~~~gI~diN~IKPGIgEaTRvLLRRv-P~~vLVr~~~~-----pd~~Hl~~LA~ekgVpVe~~~d 88 (100)
T PF15608_consen 23 AEVERIAERYGISDINLIKPGIGEATRVLLRRV-PWKVLVRDPDD-----PDLAHLLLLAEEKGVPVEVYPD 88 (100)
T ss_pred HHHHHHHHHhCCCCcccccCChhHHHHHHHhcC-CCEEEECCCCC-----ccHHHHHHHHHHcCCcEEEeCC
Confidence 3445566677763 4444444445555566653 56777767766 5789999999999999988653
No 498
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=24.42 E-value=3.3e+02 Score=27.63 Aligned_cols=46 Identities=15% Similarity=0.222 Sum_probs=31.6
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCCCcc----ccHHHHHHHHHhCCCEEEEeCC
Q 009167 284 DMEGLEAALNNNNVSLFFTESPTNPFLRC----VDVKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 284 d~e~Le~al~~~~tklV~lesP~NPtG~i----~dl~~Ia~la~~~gi~lIvDea 334 (541)
+.+.+++.+. +..+|++ .|. .|+- -.+++|.++++++++++|+|+-
T Consensus 91 av~~i~k~L~--RlhavVI-GPG--LGRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 91 AVDIIEKLLQ--RLHAVVI-GPG--LGRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred hHhHHHHHHh--heeEEEE-CCC--CCCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 3455666564 3667776 444 4552 2367889999999999999964
No 499
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria. Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane
Probab=24.38 E-value=6.4e+02 Score=25.26 Aligned_cols=20 Identities=10% Similarity=0.042 Sum_probs=9.3
Q ss_pred HHHHHHHHHhCC-CEEEEeCC
Q 009167 315 VKLVSDLCHKKG-AIVCIDGT 334 (541)
Q Consensus 315 l~~Ia~la~~~g-i~lIvDea 334 (541)
+.++.+..++-+ +.++.|..
T Consensus 181 ~~~~~~~Lk~g~~v~~l~Dq~ 201 (295)
T PF03279_consen 181 IRELIRALKEGGIVGLLGDQD 201 (295)
T ss_pred HHHHHHHhccCCEEEEEECCC
Confidence 444444444433 34445654
No 500
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.29 E-value=1.6e+02 Score=30.98 Aligned_cols=73 Identities=15% Similarity=0.274 Sum_probs=49.4
Q ss_pred CCcchHHHHHhhcccCCeEEEEeCCCCHHHHH---HhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCC
Q 009167 258 CYRKTRIFIETVLPKMGITATVIDPADMEGLE---AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 258 ~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le---~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea 334 (541)
.|++. +.+++.-.+++.++....+...+ -++.. -|-|++|-|- ...+.+.++|.+.|+++| +++.|.+
T Consensus 60 ~y~sy----EeLakd~~vDvVyi~~~~~qH~evv~l~l~~--~K~VL~EKPl--a~n~~e~~~iveaA~~rg-v~~meg~ 130 (351)
T KOG2741|consen 60 AYGSY----EELAKDPEVDVVYISTPNPQHYEVVMLALNK--GKHVLCEKPL--AMNVAEAEEIVEAAEARG-VFFMEGL 130 (351)
T ss_pred cccCH----HHHhcCCCcCEEEeCCCCccHHHHHHHHHHc--CCcEEecccc--cCCHHHHHHHHHHHHHcC-cEEEeee
Confidence 45553 35566667888888766544333 34443 3679999886 445567889999999999 6677888
Q ss_pred CCCCC
Q 009167 335 FATPL 339 (541)
Q Consensus 335 ~a~~~ 339 (541)
+.-.+
T Consensus 131 ~~R~~ 135 (351)
T KOG2741|consen 131 WWRFF 135 (351)
T ss_pred eeecC
Confidence 65544
Done!