Query 009167
Match_columns 541
No_of_seqs 559 out of 3527
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 20:19:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009167.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009167hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ri6_A O-acetylhomoserine sulf 100.0 9.5E-65 3.3E-69 542.7 36.7 385 150-539 24-430 (430)
2 1qgn_A Protein (cystathionine 100.0 5E-63 1.7E-67 531.4 44.6 396 145-541 49-445 (445)
3 3ndn_A O-succinylhomoserine su 100.0 1.2E-62 4E-67 524.2 41.5 384 152-539 26-414 (414)
4 3nmy_A Xometc, cystathionine g 100.0 9.3E-62 3.2E-66 515.1 39.0 376 152-539 19-397 (400)
5 2fq6_A Cystathionine beta-lyas 100.0 2.3E-60 8E-65 506.7 39.8 383 152-541 25-414 (415)
6 3qhx_A Cystathionine gamma-syn 100.0 6.7E-58 2.3E-62 483.6 42.7 375 152-539 17-392 (392)
7 3acz_A Methionine gamma-lyase; 100.0 2.6E-56 8.9E-61 470.7 43.0 384 152-541 5-389 (389)
8 3cog_A Cystathionine gamma-lya 100.0 8.5E-56 2.9E-60 469.5 41.6 377 152-540 18-397 (403)
9 2ctz_A O-acetyl-L-homoserine s 100.0 2.4E-54 8.2E-59 460.6 38.3 384 153-539 3-421 (421)
10 1n8p_A Cystathionine gamma-lya 100.0 7.1E-54 2.4E-58 453.1 36.4 377 152-541 7-391 (393)
11 1gc0_A Methionine gamma-lyase; 100.0 2.9E-53 9.8E-58 448.3 38.5 386 152-540 9-396 (398)
12 1e5e_A MGL, methionine gamma-l 100.0 4.7E-51 1.6E-55 432.9 41.9 385 152-540 7-394 (404)
13 2cb1_A O-acetyl homoserine sul 100.0 1.5E-50 5.3E-55 429.5 43.4 381 153-541 3-412 (412)
14 2rfv_A Methionine gamma-lyase; 100.0 1.8E-48 6.2E-53 411.1 41.4 386 152-540 8-395 (398)
15 1cs1_A CGS, protein (cystathio 100.0 9.3E-47 3.2E-51 396.1 42.5 378 152-540 4-382 (386)
16 1ibj_A CBL, cystathionine beta 100.0 2E-46 6.7E-51 404.7 40.9 375 153-541 87-462 (464)
17 1pff_A Methionine gamma-lyase; 100.0 3.2E-40 1.1E-44 338.2 34.5 326 214-541 2-330 (331)
18 3i16_A Aluminum resistance pro 100.0 2.5E-34 8.6E-39 306.6 28.6 324 199-541 65-425 (427)
19 3hvy_A Cystathionine beta-lyas 100.0 1.3E-33 4.5E-38 301.1 29.1 320 199-541 66-425 (427)
20 3jzl_A Putative cystathionine 100.0 3E-33 1E-37 297.0 27.8 321 199-541 51-408 (409)
21 1bs0_A Protein (8-amino-7-oxon 100.0 4.2E-27 1.4E-31 245.3 33.2 284 209-540 83-382 (384)
22 1t3i_A Probable cysteine desul 100.0 1.3E-27 4.6E-32 251.0 28.5 305 202-539 64-407 (420)
23 3ffh_A Histidinol-phosphate am 100.0 9.6E-27 3.3E-31 240.8 33.5 282 204-540 61-361 (363)
24 1fc4_A 2-amino-3-ketobutyrate 100.0 4.2E-27 1.4E-31 246.7 31.2 283 209-538 89-390 (401)
25 3cai_A Possible aminotransfera 100.0 1.9E-27 6.4E-32 249.6 28.2 304 201-541 60-405 (406)
26 3tqx_A 2-amino-3-ketobutyrate 100.0 8.6E-27 3E-31 243.4 31.9 286 208-540 86-395 (399)
27 3euc_A Histidinol-phosphate am 100.0 2.1E-27 7E-32 246.1 26.4 284 204-538 61-365 (367)
28 4hvk_A Probable cysteine desul 100.0 1.3E-27 4.5E-32 247.0 24.5 306 201-538 34-366 (382)
29 3get_A Histidinol-phosphate am 100.0 3.5E-27 1.2E-31 244.2 27.5 282 204-538 59-364 (365)
30 1jg8_A L-ALLO-threonine aldola 100.0 1.7E-27 5.9E-32 244.6 24.2 283 208-538 36-339 (347)
31 1kmj_A Selenocysteine lyase; p 100.0 6.1E-27 2.1E-31 244.6 28.1 295 208-539 65-399 (406)
32 3lvm_A Cysteine desulfurase; s 100.0 6.3E-27 2.2E-31 246.9 28.3 305 203-538 61-392 (423)
33 3op7_A Aminotransferase class 100.0 5.4E-27 1.9E-31 243.7 26.8 285 209-540 62-370 (375)
34 3ly1_A Putative histidinol-pho 100.0 6.9E-27 2.3E-31 240.8 27.0 283 204-539 45-350 (354)
35 2w8t_A SPT, serine palmitoyltr 100.0 2.2E-26 7.6E-31 244.6 31.2 286 208-539 107-409 (427)
36 1fg7_A Histidinol phosphate am 100.0 2.9E-26 9.9E-31 237.7 30.5 280 205-541 53-354 (356)
37 3dzz_A Putative pyridoxal 5'-p 100.0 2.6E-26 9.1E-31 239.1 29.8 297 201-540 57-388 (391)
38 3vax_A Putative uncharacterize 100.0 2.9E-27 9.8E-32 247.4 22.1 307 201-539 54-394 (400)
39 3a2b_A Serine palmitoyltransfe 100.0 7.6E-26 2.6E-30 237.2 32.3 284 208-539 86-390 (398)
40 3ht4_A Aluminum resistance pro 100.0 9.6E-27 3.3E-31 248.7 25.4 258 207-480 62-345 (431)
41 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 4.7E-27 1.6E-31 243.1 21.9 293 202-539 45-364 (371)
42 2dr1_A PH1308 protein, 386AA l 99.9 7.7E-26 2.6E-30 234.9 30.6 293 204-539 47-377 (386)
43 4eb5_A Probable cysteine desul 99.9 1.9E-26 6.3E-31 239.2 24.9 304 205-538 38-366 (382)
44 3hdo_A Histidinol-phosphate am 99.9 3.1E-26 1E-30 237.1 25.3 283 204-540 59-350 (360)
45 1elu_A L-cysteine/L-cystine C- 99.9 7.5E-26 2.6E-30 235.3 27.9 291 206-541 53-388 (390)
46 3zrp_A Serine-pyruvate aminotr 99.9 7.5E-26 2.6E-30 234.5 27.2 287 208-539 33-361 (384)
47 3kki_A CAI-1 autoinducer synth 99.9 1.1E-25 3.8E-30 237.2 28.7 281 210-539 104-398 (409)
48 4dq6_A Putative pyridoxal phos 99.9 1.8E-25 6.3E-30 232.7 29.9 280 200-524 61-374 (391)
49 3frk_A QDTB; aminotransferase, 99.9 1.7E-26 5.9E-31 240.2 21.4 304 207-541 33-364 (373)
50 3nra_A Aspartate aminotransfer 99.9 3E-26 1E-30 240.3 22.9 288 207-539 79-403 (407)
51 3ftb_A Histidinol-phosphate am 99.9 1.6E-25 5.4E-30 230.9 26.8 283 205-540 56-360 (361)
52 2z61_A Probable aspartate amin 99.9 1.1E-25 3.7E-30 233.7 25.6 264 211-524 67-352 (370)
53 1lc5_A COBD, L-threonine-O-3-p 99.9 1.8E-25 6.3E-30 231.6 26.8 282 206-539 55-358 (364)
54 2dou_A Probable N-succinyldiam 99.9 2.5E-25 8.6E-30 231.4 27.8 285 206-539 58-372 (376)
55 1b5p_A Protein (aspartate amin 99.9 5.3E-25 1.8E-29 230.3 30.3 271 211-529 69-370 (385)
56 1b9h_A AHBA synthase, protein 99.9 1.4E-25 4.7E-30 234.4 25.8 309 204-540 32-383 (388)
57 1eg5_A Aminotransferase; PLP-d 99.9 8.8E-26 3E-30 234.0 24.0 303 208-540 42-375 (384)
58 3nyt_A Aminotransferase WBPE; 99.9 3.2E-25 1.1E-29 230.4 27.6 302 208-540 33-359 (367)
59 3kax_A Aminotransferase, class 99.9 6.9E-25 2.4E-29 227.7 30.0 280 201-524 54-366 (383)
60 1j32_A Aspartate aminotransfer 99.9 1.6E-25 5.6E-30 233.6 25.3 283 211-539 68-385 (388)
61 3g0t_A Putative aminotransfera 99.9 2E-25 7E-30 236.5 25.3 295 206-539 77-435 (437)
62 3uwc_A Nucleotide-sugar aminot 99.9 9.7E-26 3.3E-30 233.9 22.2 301 208-540 36-366 (374)
63 3ruy_A Ornithine aminotransfer 99.9 4.5E-25 1.5E-29 230.8 27.3 289 201-539 69-388 (392)
64 3p1t_A Putative histidinol-pho 99.9 8.6E-25 2.9E-29 223.3 28.6 274 204-536 45-332 (337)
65 1v2d_A Glutamine aminotransfer 99.9 1.7E-24 5.8E-29 225.5 31.4 271 206-524 56-352 (381)
66 3fkd_A L-threonine-O-3-phospha 99.9 3E-25 1E-29 228.6 25.4 282 204-539 44-340 (350)
67 3lws_A Aromatic amino acid bet 99.9 2E-25 6.9E-30 230.3 23.8 255 209-486 46-319 (357)
68 3h14_A Aminotransferase, class 99.9 3.6E-25 1.2E-29 231.5 25.7 282 212-539 70-380 (391)
69 1c7n_A Cystalysin; transferase 99.9 1.4E-24 4.8E-29 227.4 30.1 285 212-539 68-391 (399)
70 3dyd_A Tyrosine aminotransfera 99.9 7.5E-25 2.6E-29 232.8 28.4 284 209-539 95-422 (427)
71 1o4s_A Aspartate aminotransfer 99.9 6.6E-25 2.3E-29 229.9 27.5 264 211-524 79-370 (389)
72 3jtx_A Aminotransferase; NP_28 99.9 7.7E-25 2.6E-29 228.9 27.3 275 212-529 68-383 (396)
73 3fvs_A Kynurenine--oxoglutarat 99.9 4.2E-25 1.4E-29 233.1 25.5 290 211-540 68-421 (422)
74 3ffr_A Phosphoserine aminotran 99.9 1.2E-24 4.2E-29 223.6 28.1 282 210-540 43-359 (362)
75 3ju7_A Putative PLP-dependent 99.9 5.1E-25 1.8E-29 231.0 25.7 304 209-540 35-370 (377)
76 3e2y_A Kynurenine-oxoglutarate 99.9 7.7E-25 2.6E-29 229.9 26.7 294 205-540 55-408 (410)
77 3isl_A Purine catabolism prote 99.9 5.9E-25 2E-29 230.8 25.6 289 209-540 43-389 (416)
78 1u08_A Hypothetical aminotrans 99.9 4.7E-24 1.6E-28 222.6 32.1 285 211-540 68-385 (386)
79 2o1b_A Aminotransferase, class 99.9 6.3E-25 2.1E-29 231.5 25.3 284 210-539 85-401 (404)
80 3nnk_A Ureidoglycine-glyoxylat 99.9 7.8E-25 2.7E-29 229.5 25.8 287 210-539 46-388 (411)
81 3fdb_A Beta C-S lyase, putativ 99.9 1.6E-25 5.4E-30 232.3 20.2 283 213-540 61-375 (377)
82 3l8a_A METC, putative aminotra 99.9 9.2E-25 3.1E-29 231.4 26.5 282 200-524 90-403 (421)
83 3pj0_A LMO0305 protein; struct 99.9 4.6E-25 1.6E-29 227.6 23.5 274 208-525 46-339 (359)
84 3aow_A Putative uncharacterize 99.9 1.7E-24 5.7E-29 232.1 28.7 287 210-539 118-443 (448)
85 3f9t_A TDC, L-tyrosine decarbo 99.9 4.8E-25 1.7E-29 228.9 23.6 278 209-540 68-393 (397)
86 2r2n_A Kynurenine/alpha-aminoa 99.9 5E-24 1.7E-28 226.1 31.7 272 228-539 111-422 (425)
87 2zyj_A Alpha-aminodipate amino 99.9 5.5E-25 1.9E-29 230.7 24.0 287 210-539 74-391 (397)
88 2x5d_A Probable aminotransfera 99.9 1.7E-24 5.9E-29 228.3 27.9 285 209-539 74-396 (412)
89 2aeu_A Hypothetical protein MJ 99.9 5.9E-25 2E-29 230.1 23.7 205 212-426 60-279 (374)
90 1vjo_A Alanine--glyoxylate ami 99.9 9.7E-25 3.3E-29 227.9 25.2 288 209-539 66-389 (393)
91 3cq5_A Histidinol-phosphate am 99.9 1.9E-24 6.7E-29 224.5 27.2 252 206-486 65-338 (369)
92 1iug_A Putative aspartate amin 99.9 1.6E-24 5.4E-29 222.2 25.9 281 210-539 34-342 (352)
93 2bwn_A 5-aminolevulinate synth 99.9 4.8E-24 1.6E-28 223.7 30.1 285 208-540 89-395 (401)
94 2z9v_A Aspartate aminotransfer 99.9 2.2E-24 7.5E-29 224.9 27.0 288 210-539 42-369 (392)
95 1gd9_A Aspartate aminotransfer 99.9 3E-24 1E-28 224.1 27.9 283 211-539 64-384 (389)
96 1vp4_A Aminotransferase, putat 99.9 8.3E-25 2.8E-29 232.0 23.7 286 211-539 86-416 (425)
97 2x5f_A Aspartate_tyrosine_phen 99.9 2.5E-24 8.5E-29 228.3 27.1 284 206-540 83-428 (430)
98 3ezs_A Aminotransferase ASPB; 99.9 7.8E-25 2.7E-29 227.2 22.5 277 212-539 61-373 (376)
99 3kgw_A Alanine-glyoxylate amin 99.9 1.2E-24 4E-29 226.2 23.8 290 209-540 55-387 (393)
100 3ele_A Amino transferase; RER0 99.9 2.5E-24 8.6E-29 225.4 26.4 280 210-539 76-394 (398)
101 1yiz_A Kynurenine aminotransfe 99.9 4.9E-24 1.7E-28 225.8 28.8 274 211-524 78-410 (429)
102 2huf_A Alanine glyoxylate amin 99.9 2.7E-24 9.4E-29 224.2 26.4 293 204-539 46-381 (393)
103 2zc0_A Alanine glyoxylate tran 99.9 2.5E-24 8.6E-29 226.0 26.1 287 211-540 76-403 (407)
104 3dr4_A Putative perosamine syn 99.9 3.1E-24 1E-28 224.6 26.4 306 207-541 53-389 (391)
105 2oga_A Transaminase; PLP-depen 99.9 1.2E-24 4E-29 228.9 23.0 212 209-430 62-297 (399)
106 1iay_A ACC synthase 2, 1-amino 99.9 4.5E-24 1.5E-28 226.2 27.5 291 204-539 76-425 (428)
107 3ppl_A Aspartate aminotransfer 99.9 2.9E-24 1E-28 227.7 26.0 288 210-539 78-418 (427)
108 1d2f_A MALY protein; aminotran 99.9 1.6E-23 5.4E-28 218.9 31.0 270 212-525 65-371 (390)
109 1mdo_A ARNB aminotransferase; 99.9 5.7E-24 2E-28 222.0 27.1 304 208-540 37-381 (393)
110 2gb3_A Aspartate aminotransfer 99.9 7.7E-24 2.6E-28 223.2 27.9 285 211-539 80-400 (409)
111 1bw0_A TAT, protein (tyrosine 99.9 3.6E-24 1.2E-28 225.7 25.2 283 210-539 75-411 (416)
112 1m32_A 2-aminoethylphosphonate 99.9 1.7E-24 5.9E-29 222.5 21.8 286 210-540 37-360 (366)
113 2ch1_A 3-hydroxykynurenine tra 99.9 6.2E-24 2.1E-28 221.8 25.9 294 204-539 45-381 (396)
114 2o0r_A RV0858C (N-succinyldiam 99.9 2.2E-23 7.6E-28 219.7 30.0 254 212-489 64-352 (411)
115 3if2_A Aminotransferase; YP_26 99.9 4.4E-24 1.5E-28 227.1 24.7 297 210-539 83-438 (444)
116 3b46_A Aminotransferase BNA3; 99.9 1.7E-23 5.8E-28 223.8 29.3 286 211-538 96-440 (447)
117 1xi9_A Putative transaminase; 99.9 1.2E-23 4E-28 221.5 27.4 284 211-540 79-402 (406)
118 2bkw_A Alanine-glyoxylate amin 99.9 1.9E-23 6.5E-28 216.7 27.6 286 211-540 39-383 (385)
119 2eh6_A Acoat, acetylornithine 99.9 6.3E-24 2.1E-28 220.3 23.3 281 206-540 66-373 (375)
120 4adb_A Succinylornithine trans 99.9 1.1E-23 3.8E-28 220.8 25.1 291 202-539 73-398 (406)
121 2fnu_A Aminotransferase; prote 99.9 1.5E-23 5.2E-28 217.0 25.6 305 208-540 30-367 (375)
122 3g7q_A Valine-pyruvate aminotr 99.9 2.4E-23 8.3E-28 219.0 27.4 295 209-539 74-411 (417)
123 1v72_A Aldolase; PLP-dependent 99.9 1.2E-22 4E-27 208.6 31.8 279 208-540 41-348 (356)
124 3nx3_A Acoat, acetylornithine 99.9 1.9E-23 6.3E-28 218.9 26.2 290 200-540 68-394 (395)
125 3piu_A 1-aminocyclopropane-1-c 99.9 1.8E-23 6E-28 222.3 26.4 288 206-539 81-430 (435)
126 3ez1_A Aminotransferase MOCR f 99.9 3.5E-23 1.2E-27 218.8 28.2 288 210-539 70-413 (423)
127 3f0h_A Aminotransferase; RER07 99.9 2.1E-23 7.1E-28 216.3 25.7 168 210-382 52-229 (376)
128 2yrr_A Aminotransferase, class 99.9 1E-23 3.4E-28 215.7 22.2 284 210-539 33-351 (353)
129 3a9z_A Selenocysteine lyase; P 99.9 3.1E-23 1.1E-27 219.6 25.7 306 209-538 60-421 (432)
130 2c81_A Glutamine-2-deoxy-scyll 99.9 1.3E-22 4.3E-27 214.5 30.0 303 210-540 42-409 (418)
131 1uu1_A Histidinol-phosphate am 99.9 9.4E-23 3.2E-27 209.0 27.1 265 206-540 52-333 (335)
132 3d6k_A Putative aminotransfera 99.9 4.4E-23 1.5E-27 218.7 24.9 291 206-539 71-416 (422)
133 3tcm_A Alanine aminotransferas 99.9 1.4E-22 4.7E-27 220.3 28.8 287 211-540 135-493 (500)
134 1qz9_A Kynureninase; kynurenin 99.9 8.4E-23 2.9E-27 214.8 26.0 280 209-538 70-395 (416)
135 3t18_A Aminotransferase class 99.9 1E-22 3.5E-27 214.6 25.8 275 211-540 80-409 (413)
136 3b8x_A WBDK, pyridoxamine 5-ph 99.9 3E-22 1E-26 209.5 29.0 302 208-538 32-389 (390)
137 1vef_A Acetylornithine/acetyl- 99.9 4E-23 1.4E-27 216.2 21.6 282 206-539 83-391 (395)
138 3rq1_A Aminotransferase class 99.9 1.2E-22 4E-27 214.4 24.2 275 211-540 81-414 (418)
139 3e9k_A Kynureninase; kynurenin 99.9 2.8E-23 9.7E-28 222.9 19.4 284 210-539 111-455 (465)
140 3qgu_A LL-diaminopimelate amin 99.9 8.2E-23 2.8E-27 217.8 21.9 283 210-539 111-438 (449)
141 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 5.9E-22 2E-26 211.0 28.0 310 207-540 59-431 (437)
142 3mad_A Sphingosine-1-phosphate 99.9 2.7E-22 9.4E-27 218.3 25.2 275 213-540 142-468 (514)
143 1z7d_A Ornithine aminotransfer 99.9 7.3E-22 2.5E-26 210.5 27.5 288 207-538 104-422 (433)
144 3hbx_A GAD 1, glutamate decarb 99.9 4.7E-22 1.6E-26 216.3 26.3 284 214-539 99-442 (502)
145 2po3_A 4-dehydrase; external a 99.9 2E-21 6.8E-26 205.9 30.5 252 209-485 51-328 (424)
146 2ord_A Acoat, acetylornithine 99.9 6E-23 2.1E-27 215.2 18.4 286 207-541 79-397 (397)
147 3ihj_A Alanine aminotransferas 99.9 1.4E-21 4.7E-26 212.4 29.7 215 212-431 131-406 (498)
148 2dkj_A Serine hydroxymethyltra 99.9 2.8E-22 9.6E-27 209.9 23.5 291 208-539 63-386 (407)
149 1svv_A Threonine aldolase; str 99.9 4.2E-22 1.4E-26 204.4 23.9 286 201-540 40-353 (359)
150 2oat_A Ornithine aminotransfer 99.9 1.8E-21 6E-26 208.0 29.6 288 207-540 115-438 (439)
151 3ei9_A LL-diaminopimelate amin 99.9 6.7E-22 2.3E-26 209.7 24.7 268 210-524 98-409 (432)
152 3mc6_A Sphingosine-1-phosphate 99.9 8.1E-22 2.8E-26 213.3 25.2 277 212-540 109-436 (497)
153 2pb2_A Acetylornithine/succiny 99.9 1.1E-21 3.9E-26 208.0 25.7 285 206-540 95-417 (420)
154 1o69_A Aminotransferase; struc 99.9 7E-21 2.4E-25 199.9 30.3 303 209-540 31-382 (394)
155 3ke3_A Putative serine-pyruvat 99.9 7.5E-22 2.6E-26 206.3 22.8 291 209-540 34-375 (379)
156 3bwn_A AT1G70560, L-tryptophan 99.9 8.8E-22 3E-26 207.0 22.9 282 213-539 71-381 (391)
157 2c0r_A PSAT, phosphoserine ami 99.9 9.2E-22 3.1E-26 203.4 22.2 275 211-540 50-356 (362)
158 7aat_A Aspartate aminotransfer 99.9 2.1E-21 7.3E-26 203.5 24.8 212 211-427 72-336 (401)
159 2dgk_A GAD-beta, GADB, glutama 99.9 1.1E-21 3.9E-26 209.9 23.1 286 212-538 83-427 (452)
160 3f6t_A Aspartate aminotransfer 99.9 9.9E-22 3.4E-26 215.3 22.7 159 211-375 139-330 (533)
161 3n0l_A Serine hydroxymethyltra 99.9 3.7E-21 1.3E-25 202.1 25.6 250 214-486 75-343 (417)
162 3dxv_A Alpha-amino-epsilon-cap 99.9 2.5E-21 8.5E-26 205.9 24.4 291 201-539 77-423 (439)
163 1w23_A Phosphoserine aminotran 99.9 2.6E-22 9E-27 206.7 16.0 275 211-540 49-355 (360)
164 1ajs_A Aspartate aminotransfer 99.9 8.8E-21 3E-25 199.5 26.3 215 208-427 72-344 (412)
165 3b1d_A Betac-S lyase; HET: PLP 99.8 3.6E-24 1.2E-28 224.3 0.0 283 212-538 68-390 (392)
166 3asa_A LL-diaminopimelate amin 99.9 6.8E-21 2.3E-25 200.1 24.2 255 209-488 74-359 (400)
167 1sff_A 4-aminobutyrate aminotr 99.9 7.7E-21 2.6E-25 200.6 24.6 286 205-539 79-422 (426)
168 1s0a_A Adenosylmethionine-8-am 99.9 1.2E-20 4.1E-25 200.0 26.1 289 204-539 80-418 (429)
169 3gbx_A Serine hydroxymethyltra 99.9 2E-21 7E-26 204.0 19.7 253 210-485 76-349 (420)
170 3meb_A Aspartate aminotransfer 99.9 1E-20 3.4E-25 202.5 25.2 224 201-427 87-371 (448)
171 2z67_A O-phosphoseryl-tRNA(SEC 99.9 1.4E-20 4.7E-25 202.1 26.0 284 211-541 134-454 (456)
172 2vi8_A Serine hydroxymethyltra 99.9 3.2E-21 1.1E-25 201.8 20.6 291 209-539 64-385 (405)
173 2ez2_A Beta-tyrosinase, tyrosi 99.9 1.9E-20 6.5E-25 199.9 26.1 209 208-426 73-331 (456)
174 1ax4_A Tryptophanase; tryptoph 99.9 1.1E-20 3.8E-25 202.1 24.0 296 208-539 74-435 (467)
175 2eo5_A 419AA long hypothetical 99.9 1.7E-20 5.8E-25 198.7 24.8 283 205-540 81-417 (419)
176 1wyu_B Glycine dehydrogenase s 99.9 9.3E-21 3.2E-25 204.4 23.0 211 211-427 108-363 (474)
177 3ecd_A Serine hydroxymethyltra 99.9 3E-20 1E-24 195.5 25.9 250 214-486 82-351 (425)
178 1rv3_A Serine hydroxymethyltra 99.9 4.6E-21 1.6E-25 207.4 19.6 210 214-430 94-346 (483)
179 3a8u_X Omega-amino acid--pyruv 99.9 4.9E-20 1.7E-24 196.6 26.9 260 206-484 89-414 (449)
180 3fsl_A Aromatic-amino-acid ami 99.9 2.5E-20 8.6E-25 194.6 23.7 213 210-427 70-333 (397)
181 2q7w_A Aspartate aminotransfer 99.9 2E-20 6.9E-25 195.3 22.6 215 208-427 67-332 (396)
182 2fyf_A PSAT, phosphoserine ami 99.9 4.1E-20 1.4E-24 194.0 24.2 283 210-538 78-391 (398)
183 1yaa_A Aspartate aminotransfer 99.9 3.2E-20 1.1E-24 195.4 23.3 214 209-427 72-344 (412)
184 1zod_A DGD, 2,2-dialkylglycine 99.9 9.4E-20 3.2E-24 193.2 26.5 290 205-539 80-430 (433)
185 4f4e_A Aromatic-amino-acid ami 99.9 4E-20 1.4E-24 195.6 23.2 213 210-427 92-355 (420)
186 3h7f_A Serine hydroxymethyltra 99.9 2.2E-20 7.5E-25 199.8 21.1 209 213-427 93-321 (447)
187 4eu1_A Mitochondrial aspartate 99.9 3.3E-20 1.1E-24 195.3 21.9 214 209-427 78-344 (409)
188 2x3l_A ORN/Lys/Arg decarboxyla 99.8 6.4E-21 2.2E-25 204.3 16.6 166 201-378 48-230 (446)
189 2hox_A ALLIIN lyase 1; cystein 99.8 1.4E-20 5E-25 200.4 19.1 269 212-524 102-406 (427)
190 3gju_A Putative aminotransfera 99.8 3E-19 1E-23 191.6 28.8 291 202-539 87-454 (460)
191 3i4j_A Aminotransferase, class 99.8 1.9E-19 6.5E-24 190.8 26.8 294 206-540 68-427 (430)
192 2ay1_A Aroat, aromatic amino a 99.8 3.2E-20 1.1E-24 193.9 20.0 213 210-427 69-329 (394)
193 4a6r_A Omega transaminase; tra 99.8 2.7E-19 9.2E-24 191.9 27.6 289 202-539 86-447 (459)
194 2a7v_A Serine hydroxymethyltra 99.8 4.2E-20 1.4E-24 200.0 21.0 256 208-486 94-396 (490)
195 1js3_A DDC;, DOPA decarboxylas 99.8 9.3E-20 3.2E-24 196.8 23.5 248 209-480 108-431 (486)
196 1c4k_A Protein (ornithine deca 99.8 1.6E-19 5.3E-24 204.0 26.1 218 208-431 171-443 (730)
197 3vp6_A Glutamate decarboxylase 99.8 2E-19 6.9E-24 196.0 25.5 221 208-433 129-414 (511)
198 3tfu_A Adenosylmethionine-8-am 99.8 6.5E-20 2.2E-24 197.1 21.2 289 204-540 112-452 (457)
199 3n5m_A Adenosylmethionine-8-am 99.8 1.9E-19 6.6E-24 192.3 24.8 296 202-540 83-451 (452)
200 2epj_A Glutamate-1-semialdehyd 99.8 8.7E-20 3E-24 193.8 21.2 259 206-486 92-401 (434)
201 3l44_A Glutamate-1-semialdehyd 99.8 1.5E-19 5.1E-24 191.9 22.8 259 206-486 91-400 (434)
202 2zy4_A L-aspartate beta-decarb 99.8 1.7E-19 5.8E-24 198.1 23.6 150 227-380 166-338 (546)
203 3dod_A Adenosylmethionine-8-am 99.8 1.6E-19 5.5E-24 192.9 22.9 286 205-539 82-441 (448)
204 3oks_A 4-aminobutyrate transam 99.8 2.1E-19 7.3E-24 192.5 23.5 291 202-539 96-449 (451)
205 2okj_A Glutamate decarboxylase 99.8 2.4E-19 8.2E-24 194.6 23.5 214 214-431 136-409 (504)
206 1wyu_A Glycine dehydrogenase ( 99.8 7.2E-19 2.5E-23 187.3 25.3 279 210-540 108-435 (438)
207 4ffc_A 4-aminobutyrate aminotr 99.8 8.9E-19 3E-23 187.8 26.0 291 202-539 99-447 (453)
208 2qma_A Diaminobutyrate-pyruvat 99.8 2.9E-19 9.8E-24 193.7 22.3 241 201-464 129-433 (497)
209 4e77_A Glutamate-1-semialdehyd 99.8 3.4E-19 1.1E-23 189.0 22.1 258 207-486 90-399 (429)
210 3hmu_A Aminotransferase, class 99.8 1.2E-18 4.2E-23 187.9 26.6 288 202-539 91-450 (472)
211 2vyc_A Biodegradative arginine 99.8 4E-19 1.4E-23 201.9 23.3 216 206-429 201-466 (755)
212 2cjg_A L-lysine-epsilon aminot 99.8 7.3E-19 2.5E-23 188.2 23.9 281 205-539 96-446 (449)
213 2jis_A Cysteine sulfinic acid 99.8 1.1E-18 3.9E-23 190.0 24.8 216 212-431 150-424 (515)
214 2cy8_A D-phgat, D-phenylglycin 99.8 1.3E-18 4.5E-23 185.9 23.8 254 207-483 94-404 (453)
215 2oqx_A Tryptophanase; lyase, p 99.8 3.5E-19 1.2E-23 190.5 19.4 295 208-538 72-435 (467)
216 3k28_A Glutamate-1-semialdehyd 99.8 6.1E-19 2.1E-23 187.2 21.0 286 206-540 89-426 (429)
217 4e1o_A HDC, histidine decarbox 99.8 1.7E-18 5.9E-23 187.1 24.8 256 201-480 107-435 (481)
218 3k7y_A Aspartate aminotransfer 99.8 1.3E-18 4.6E-23 184.1 23.3 217 201-425 65-333 (405)
219 3i5t_A Aminotransferase; pyrid 99.8 5.8E-18 2E-22 182.8 28.5 288 206-539 93-452 (476)
220 3k40_A Aromatic-L-amino-acid d 99.8 1.7E-18 5.7E-23 187.0 23.6 251 208-480 107-428 (475)
221 2e7u_A Glutamate-1-semialdehyd 99.8 2.7E-18 9.1E-23 181.8 24.2 257 207-486 89-397 (424)
222 3e77_A Phosphoserine aminotran 99.8 1.3E-18 4.4E-23 182.4 18.9 281 209-540 57-370 (377)
223 3fq8_A Glutamate-1-semialdehyd 99.8 4.6E-18 1.6E-22 180.0 22.5 258 207-486 89-397 (427)
224 3qm2_A Phosphoserine aminotran 99.8 6.2E-18 2.1E-22 177.8 19.6 281 205-540 67-380 (386)
225 3m5u_A Phosphoserine aminotran 99.7 5.5E-17 1.9E-21 169.1 21.6 275 209-540 49-355 (361)
226 2yky_A Beta-transaminase; tran 99.6 2.8E-19 9.6E-24 192.4 0.0 262 206-486 136-432 (465)
227 3n75_A LDC, lysine decarboxyla 99.7 1.4E-16 4.7E-21 178.9 21.2 213 207-428 192-443 (715)
228 1ohv_A 4-aminobutyrate aminotr 99.7 2.2E-16 7.4E-21 170.3 20.8 276 211-539 111-465 (472)
229 4h51_A Aspartate aminotransfer 99.7 1.8E-14 6.2E-19 153.0 27.4 221 200-427 79-351 (420)
230 4atq_A 4-aminobutyrate transam 99.6 1.4E-13 4.9E-18 147.5 24.7 292 207-540 104-454 (456)
231 4ao9_A Beta-phenylalanine amin 99.6 1.1E-13 3.8E-18 148.1 23.1 234 208-463 125-383 (454)
232 3bc8_A O-phosphoseryl-tRNA(SEC 99.5 1.1E-12 3.8E-17 139.5 25.0 211 212-428 100-338 (450)
233 3ou5_A Serine hydroxymethyltra 99.5 4.5E-13 1.5E-17 140.9 20.4 254 201-477 85-390 (490)
234 4e3q_A Pyruvate transaminase; 99.5 9.2E-13 3.2E-17 141.9 23.4 284 208-540 109-467 (473)
235 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 4.3E-13 1.5E-17 141.7 17.1 196 224-427 130-355 (501)
236 4a0g_A Adenosylmethionine-8-am 99.4 1.4E-12 4.7E-17 149.5 18.7 257 206-483 420-794 (831)
237 3dr5_A Putative O-methyltransf 47.7 1.3E+02 0.0045 27.5 10.8 122 208-335 37-165 (221)
238 2yxb_A Coenzyme B12-dependent 43.7 30 0.001 30.7 5.3 67 258-326 30-97 (161)
239 1tks_A 3,4-dihydroxy-2-butanon 39.8 29 0.00099 32.3 4.6 36 296-331 159-194 (204)
240 2xhz_A KDSD, YRBH, arabinose 5 39.6 1.4E+02 0.0049 26.0 9.4 39 309-353 106-146 (183)
241 3gi1_A LBP, laminin-binding pr 39.4 46 0.0016 32.4 6.4 70 248-331 178-256 (286)
242 3tnl_A Shikimate dehydrogenase 38.9 1.5E+02 0.0052 29.2 10.2 103 226-337 155-266 (315)
243 3sho_A Transcriptional regulat 36.9 1.6E+02 0.0054 25.8 9.2 41 309-355 97-139 (187)
244 3ic5_A Putative saccharopine d 35.8 1.6E+02 0.0054 23.1 9.0 90 227-330 7-97 (118)
245 3i6i_A Putative leucoanthocyan 35.6 76 0.0026 31.0 7.5 63 271-336 58-121 (346)
246 1zco_A 2-dehydro-3-deoxyphosph 35.4 2E+02 0.0068 27.5 10.1 67 273-339 129-205 (262)
247 1qyd_A Pinoresinol-lariciresin 34.7 1.2E+02 0.0041 28.8 8.6 54 272-327 54-109 (313)
248 4h1h_A LMO1638 protein; MCCF-l 34.5 74 0.0025 31.6 7.1 70 245-314 8-96 (327)
249 2o1e_A YCDH; alpha-beta protei 34.3 59 0.002 32.1 6.3 69 248-330 189-266 (312)
250 1y80_A Predicted cobalamin bin 34.0 77 0.0026 29.0 6.7 74 259-334 101-179 (210)
251 3tla_A MCCF; serine protease, 33.3 87 0.003 31.8 7.4 69 246-314 40-127 (371)
252 3vnd_A TSA, tryptophan synthas 33.2 88 0.003 30.2 7.2 89 242-332 116-212 (267)
253 3tr6_A O-methyltransferase; ce 33.1 2.5E+02 0.0085 25.0 10.2 122 209-335 49-176 (225)
254 1vhx_A Putative holliday junct 33.0 47 0.0016 29.1 4.7 55 284-338 43-103 (150)
255 3ruf_A WBGU; rossmann fold, UD 32.8 2.2E+02 0.0075 27.4 10.4 59 242-302 42-106 (351)
256 3mfq_A TROA, high-affinity zin 32.4 25 0.00086 34.2 3.1 59 269-331 176-243 (282)
257 2yvq_A Carbamoyl-phosphate syn 32.1 61 0.0021 28.0 5.3 86 237-331 38-130 (143)
258 4e5s_A MCCFLIKE protein (BA_56 32.0 86 0.003 31.2 7.1 70 245-314 8-96 (331)
259 3tfw_A Putative O-methyltransf 31.6 2.9E+02 0.01 25.4 10.6 121 209-335 48-172 (248)
260 1vb5_A Translation initiation 30.8 2.7E+02 0.0092 26.7 10.3 108 216-331 100-216 (276)
261 3c85_A Putative glutathione-re 30.6 78 0.0027 27.8 6.0 88 226-326 40-130 (183)
262 2r6j_A Eugenol synthase 1; phe 30.5 82 0.0028 30.2 6.6 55 272-331 57-112 (318)
263 3sr3_A Microcin immunity prote 29.9 1E+02 0.0035 30.7 7.2 70 245-314 9-97 (336)
264 1pq4_A Periplasmic binding pro 29.5 92 0.0031 30.2 6.7 70 248-331 189-265 (291)
265 3cbg_A O-methyltransferase; cy 29.1 3.3E+02 0.011 24.7 12.2 124 208-335 56-184 (232)
266 1xrs_B D-lysine 5,6-aminomutas 29.0 2.5E+02 0.0087 26.9 9.6 64 270-334 152-223 (262)
267 2avd_A Catechol-O-methyltransf 28.8 1.6E+02 0.0055 26.5 8.0 123 209-335 54-181 (229)
268 1iv0_A Hypothetical protein; r 28.6 68 0.0023 26.0 4.6 53 284-336 39-96 (98)
269 3ecs_A Translation initiation 28.2 3.1E+02 0.01 27.0 10.2 100 226-332 122-229 (315)
270 3inp_A D-ribulose-phosphate 3- 27.7 1.2E+02 0.0043 28.7 7.1 81 269-352 129-221 (246)
271 4gqr_A Pancreatic alpha-amylas 27.7 30 0.001 35.7 2.9 86 247-335 7-99 (496)
272 1m3s_A Hypothetical protein YC 27.4 2.3E+02 0.0079 24.7 8.6 39 309-353 89-129 (186)
273 2xw6_A MGS, methylglyoxal synt 27.3 38 0.0013 29.3 3.0 44 287-331 65-110 (134)
274 3duw_A OMT, O-methyltransferas 27.3 3.3E+02 0.011 24.2 10.9 124 209-336 43-170 (223)
275 1qop_A Tryptophan synthase alp 27.0 1.5E+02 0.0053 28.2 7.7 86 245-332 118-211 (268)
276 3r3h_A O-methyltransferase, SA 26.9 1.9E+02 0.0064 26.9 8.2 123 209-336 45-173 (242)
277 3ujp_A Mn transporter subunit; 26.5 1.1E+02 0.0038 30.0 6.7 67 249-329 190-265 (307)
278 3dm5_A SRP54, signal recogniti 26.3 3.1E+02 0.01 28.4 10.3 125 211-336 75-225 (443)
279 1sui_A Caffeoyl-COA O-methyltr 26.2 3.7E+02 0.013 24.8 10.2 123 209-335 64-192 (247)
280 3c3y_A Pfomt, O-methyltransfer 25.9 3.8E+02 0.013 24.4 10.3 123 209-335 55-183 (237)
281 3e48_A Putative nucleoside-dip 25.8 1.5E+02 0.0052 27.7 7.5 55 271-327 42-98 (289)
282 2zcu_A Uncharacterized oxidore 25.0 1.7E+02 0.0058 27.2 7.6 53 273-327 44-96 (286)
283 3llv_A Exopolyphosphatase-rela 24.8 2E+02 0.007 23.6 7.4 73 226-305 7-79 (141)
284 2jl1_A Triphenylmethane reduct 24.6 2.7E+02 0.0093 25.7 9.1 53 273-327 45-99 (287)
285 1ccw_A Protein (glutamate muta 24.4 72 0.0025 27.2 4.3 74 258-333 15-92 (137)
286 1g57_A DHBP synthase, 3,4-dihy 24.4 1E+02 0.0036 28.8 5.6 34 297-331 168-201 (217)
287 1b93_A Protein (methylglyoxal 24.2 54 0.0019 29.0 3.5 44 287-331 73-118 (152)
288 1qyc_A Phenylcoumaran benzylic 24.0 1.2E+02 0.0041 28.7 6.4 53 271-328 54-107 (308)
289 3keo_A Redox-sensing transcrip 24.0 42 0.0014 31.4 2.8 103 211-332 67-178 (212)
290 1vmd_A MGS, methylglyoxal synt 24.0 66 0.0022 29.2 4.0 44 287-331 89-134 (178)
291 3etn_A Putative phosphosugar i 23.9 2.8E+02 0.0094 25.3 8.7 41 309-353 116-158 (220)
292 1lu0_A CMTI-I, trypsin inhibit 23.8 17 0.0006 22.6 0.1 15 7-29 2-16 (29)
293 4df3_A Fibrillarin-like rRNA/T 23.5 1E+02 0.0034 29.1 5.5 125 206-334 53-184 (233)
294 1xvl_A Mn transporter, MNTC pr 23.4 1.4E+02 0.0047 29.5 6.7 68 249-330 204-280 (321)
295 3tsm_A IGPS, indole-3-glycerol 23.0 1.9E+02 0.0064 27.9 7.4 96 251-351 97-193 (272)
296 3c1o_A Eugenol synthase; pheny 22.4 1.4E+02 0.0048 28.5 6.5 55 272-331 55-110 (321)
297 2g1u_A Hypothetical protein TM 22.4 3.5E+02 0.012 22.7 9.2 95 225-332 19-117 (155)
298 3kts_A Glycerol uptake operon 22.2 1E+02 0.0035 28.3 5.0 81 283-382 17-99 (192)
299 3u81_A Catechol O-methyltransf 22.1 2.4E+02 0.0081 25.3 7.8 124 208-336 42-173 (221)
300 1g94_A Alpha-amylase; beta-alp 21.5 43 0.0015 34.6 2.7 32 305-336 57-88 (448)
301 3a11_A Translation initiation 21.5 2.4E+02 0.0081 28.1 8.0 100 226-332 142-249 (338)
302 1mct_I Trypsin inhibitor A; co 21.4 19 0.00065 22.3 -0.1 15 7-29 2-16 (28)
303 3ghf_A Septum site-determining 20.8 1.2E+02 0.0042 25.3 4.9 54 273-330 15-78 (120)
304 3qvo_A NMRA family protein; st 20.4 3.5E+02 0.012 24.4 8.6 90 228-326 25-116 (236)
305 2ioj_A Hypothetical protein AF 20.4 1.3E+02 0.0045 25.4 5.2 48 277-331 55-103 (139)
306 3qtp_A Enolase 1; glycolysis, 20.3 1.7E+02 0.0058 30.4 6.7 94 236-332 283-379 (441)
307 3mio_A DHBP synthase, 3,4-dihy 20.3 1.2E+02 0.0042 28.1 5.1 35 297-331 159-194 (206)
308 1xgk_A Nitrogen metabolite rep 20.2 3.3E+02 0.011 26.6 9.0 51 274-326 52-103 (352)
No 1
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=100.00 E-value=9.5e-65 Score=542.74 Aligned_cols=385 Identities=32% Similarity=0.487 Sum_probs=308.2
Q ss_pred CCCccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEE
Q 009167 150 LSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTV 229 (541)
Q Consensus 150 ~~~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i 229 (541)
|.+++|+++|+|+..+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|+++|+.++||++||+++|.+.++
T Consensus 24 m~~~~t~~~h~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v 101 (430)
T 3ri6_A 24 MRGFTTRALHVPKAKR--DVHGALRTPVYDNAAFEFENSDEIAQVSLGRALGHVYSRSSNPTVEDLEQRLKNLTGALGVL 101 (430)
T ss_dssp -CCHHHHHHCCC----------------------------------------------CCHHHHHHHHHHHHHHTCSEEE
T ss_pred cCCcchhheeCCCCCC--CCCCCcCCCcccccccccCCHHHHHHHhhcccCCccccCCCCHHHHHHHHHHHHHHCCCcEE
Confidence 5568999999997653 35889999999999999999988777776667789999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCC
Q 009167 230 IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPF 309 (541)
Q Consensus 230 ~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPt 309 (541)
+++||++|+.+++.+++++||+|+++++.|+++...+...++..|+++++++.+|+++|++++++ ++++|++|+|+||+
T Consensus 102 ~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~-~t~~v~~e~p~Npt 180 (430)
T 3ri6_A 102 ALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDE-TTKLLFLETISNPQ 180 (430)
T ss_dssp EESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCT-TEEEEEEESSCTTT
T ss_pred EECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCC-CCeEEEEECCCCCC
Confidence 99999999999999999999999999999999988776677788999999999999999999987 59999999999999
Q ss_pred CccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe--ChHH-----------
Q 009167 310 LRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG--SGKL----------- 376 (541)
Q Consensus 310 G~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~--~~~l----------- 376 (541)
|.+.|+++|+++|+++|++||+|++|+.+...++..+|+|++++|+||+++|++++++|+++. +..+
T Consensus 181 G~~~dl~~i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~ 260 (430)
T 3ri6_A 181 LQVADLEALSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYA 260 (430)
T ss_dssp CCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHH
T ss_pred CeecCHHHHHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhh
Confidence 999999999999999999999999999988888999999999999999999999889999994 3222
Q ss_pred -------HHHHH-HHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHh
Q 009167 377 -------VTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIAT 448 (541)
Q Consensus 377 -------i~~l~-~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~ 448 (541)
+.+++ .....+|..+++..+|+++++++++..|++++.+|+++++++|+++|.|.+|.||+++++|+|++++
T Consensus 261 ~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~ 340 (430)
T 3ri6_A 261 KAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAK 340 (430)
T ss_dssp HHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHH
T ss_pred hhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHH
Confidence 23333 2345678889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCccc-EEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH
Q 009167 449 QQMTGFGG-VVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF 527 (541)
Q Consensus 449 ~~~~g~g~-~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~ 527 (541)
+|+ |+|+ |+||+++ +.+.+.+|+++++++++++|+|+.+|++++|++++|..++++++.+.|+.+++||||+|+|++
T Consensus 341 ~~~-g~Gg~~lsf~l~-~~~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~~ 418 (430)
T 3ri6_A 341 RQF-RYAGSILTFELE-SKEASYRFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEEI 418 (430)
T ss_dssp HHC-SSCCSEEEEECS-SHHHHHHHHHHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSSCH
T ss_pred HhC-CCCceEEEEEEC-CHHHHHHHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCH
Confidence 999 9999 9999998 567899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 009167 528 EDLKADVLQALH 539 (541)
Q Consensus 528 edli~dL~~AL~ 539 (541)
+|+++||++||+
T Consensus 419 ~dl~~dl~~al~ 430 (430)
T 3ri6_A 419 EDLKEDILQALC 430 (430)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 999999999984
No 2
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=100.00 E-value=5e-63 Score=531.38 Aligned_cols=396 Identities=87% Similarity=1.319 Sum_probs=366.2
Q ss_pred hhcccCCCccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhC
Q 009167 145 NEASFLSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEG 224 (541)
Q Consensus 145 ~~~~~~~~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g 224 (541)
++++|++..+|+++|+|+..+....++++.+|||+|+||.|++.+++.+.+.++..+|.|+|+++|+.+++|++||+++|
T Consensus 49 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~Pi~~t~t~~~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~lA~l~g 128 (445)
T 1qgn_A 49 KYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEG 128 (445)
T ss_dssp CCCTTCCSHHHHHHHTTTTTCCSSCCSBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHT
T ss_pred cccccCCCcccEEEecCCCCCcCCCCCCcCCCcccCCceecCCHHHHHhhhccccCCccccCCCChHHHHHHHHHHHHhC
Confidence 67788876699999999765311357999999999999999999887777766677899999999999999999999999
Q ss_pred CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCc-eEEEEe
Q 009167 225 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV-SLFFTE 303 (541)
Q Consensus 225 ~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~t-klV~le 303 (541)
.++.++++||++|+.+++.+++++||+||++.+.|++++.++...++..|+++++++.+|+++|+++++++ | ++|++|
T Consensus 129 ~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~-tv~lV~le 207 (445)
T 1qgn_A 129 AESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQK-KVNLFFTE 207 (445)
T ss_dssp CSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHS-CEEEEEEE
T ss_pred CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccC-CCCEEEEe
Confidence 99999999999999999999999999999999999998887766678889999999999999999999874 8 999999
Q ss_pred CCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH
Q 009167 304 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL 383 (541)
Q Consensus 304 sP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~ 383 (541)
+|+||+|.++|+++|+++|+++|+++|+|++|+.++...+..+|+|++++|+||+++|++++++|+++++++++++++..
T Consensus 208 ~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~ 287 (445)
T 1qgn_A 208 SPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNL 287 (445)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHH
T ss_pred CCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHH
Confidence 99999999999999999999999999999999988777788889999999999999999988899999999999998877
Q ss_pred hhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 384 HHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 384 ~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
...+|+.+++..+++++++++++..|++++.+++++++++|+++|.+.++++|+++++|+|++++++++|.|++++|+++
T Consensus 288 ~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~ 367 (445)
T 1qgn_A 288 HHILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVD 367 (445)
T ss_dssp HHHHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEES
T ss_pred HHHhCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEEC
Confidence 77788888999999999999999999999999999999999999999899999999999999999999999999999998
Q ss_pred CCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 464 GDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 464 ~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
++.+.+.+|+++|+++++++|+|+++|++++|+.++|..++.+.+..+|+.+++||||+|.|+.++++++|+++|+++
T Consensus 368 ~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~Edid~li~~L~~al~~~ 445 (445)
T 1qgn_A 368 GDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDSI 445 (445)
T ss_dssp SCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCSSCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 765678999999999999999999999999999999999999999999999999999999999999999999999875
No 3
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-62 Score=524.23 Aligned_cols=384 Identities=33% Similarity=0.546 Sum_probs=359.4
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|+|...+ .++++.||||+|++|.|++.+++.+.+.+...+|.|+||++|+.++|+++|++++|.++++++
T Consensus 26 ~~~t~~~~~~~~~~---~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~~~~ 102 (414)
T 3ndn_A 26 SQATVGVRGGMLRS---GFEETAEAMYLTSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFAT 102 (414)
T ss_dssp CHHHHHHHTTCCCC---TTCBSSCCBCCCSBBCCSSHHHHHHHHTTSSCCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CccceeeecCCCCC---CCCCcCCCcccCCceecCChHHHHHHHhCCcCCcCcCCCCChHHHHHHHHHHHHHCCCcEEEE
Confidence 58999999997642 478999999999999999999888888777788999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++++.|+++...+...++..|+++.+++.+|+++|++++++ ++++|++|+|+||+|.
T Consensus 103 ~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~-~t~~v~le~p~NptG~ 181 (414)
T 3ndn_A 103 ASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSV-PTQAVFFETPSNPMQS 181 (414)
T ss_dssp SSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSS-CCSEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCC-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999888776667778999999999999999999987 4999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHH-HHHHHhhhcCCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGA 390 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~l~~~~~~~G~~ 390 (541)
+.|+++|+++|+++|++||+|++|+.+....++.+|+|++++|+||+++++|++++|+++++++.+. .++.....+|..
T Consensus 182 ~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~ 261 (414)
T 3ndn_A 182 LVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPA 261 (414)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCC
T ss_pred cccHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999776677788899999999999999999888999999988776 677666778888
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC----H
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----L 466 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~----~ 466 (541)
+++..+++++++++++..|++++.+++++++++|+++|.+..+.||+++++|+|++++++++|+|++++|+++++ .
T Consensus 262 ~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~ 341 (414)
T 3ndn_A 262 MSAFNAWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAK 341 (414)
T ss_dssp CCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999876 6
Q ss_pred HHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 467 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 467 ~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
+.+.+|+++|+++++++|+|+.+|++++|++++|..++++++.++|+.+++||||+|+|+++|+++||++||+
T Consensus 342 ~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~e~~~dli~dl~~al~ 414 (414)
T 3ndn_A 342 QRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADIDRALS 414 (414)
T ss_dssp HHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999984
No 4
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=100.00 E-value=9.3e-62 Score=515.07 Aligned_cols=376 Identities=39% Similarity=0.668 Sum_probs=349.0
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|+|...+ ..+++++||||++++|.|++.+ ...+|.|+|+++|+.++|+++||+++|.++++++
T Consensus 19 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~--------~~~~~~y~r~~~p~~~~l~~~la~l~g~~~~~~~ 88 (400)
T 3nmy_A 19 SLATLAIHGGQSPD--PSTGAVMPPIYATSTYAQSSPG--------EHQGFEYSRTHNPTRFAYERCVAALEGGTRAFAF 88 (400)
T ss_dssp CHHHHHHHTTCCCC--TTTCBSSCCBCCCSBBBCSBTT--------BSSSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcchheeeCCCCCC--CCCCCcCCCccccceeeccCcc--------ccCCcccccCCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 47899999997653 3589999999999999998753 3467999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhh-cccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCC
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV-LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~-l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG 310 (541)
+||++|+.+ +..++++||+|+++++.|++++..+... ++..|+++.+++..|+++|++++++ ++++|++|+|+||+|
T Consensus 89 ~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~e~~~np~G 166 (400)
T 3nmy_A 89 ASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRA-DTKMVWIETPTNPML 166 (400)
T ss_dssp SSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCT-TEEEEEEESSCTTTC
T ss_pred cCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhcc-CCCEEEEECCCCCCC
Confidence 999999998 5778999999999999999988877666 7778999999999999999999987 599999999999999
Q ss_pred ccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEE-EEE-eChHHHHHHHHHhhhcC
Q 009167 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-SIS-GSGKLVTQIRNLHHVLG 388 (541)
Q Consensus 311 ~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG-~lv-~~~~li~~l~~~~~~~G 388 (541)
.+.|+++|+++|+++|+++|+||+|+.++...++.+|+|++++|+||+++|+++.++| +++ .+++++++++.....+|
T Consensus 167 ~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g 246 (400)
T 3nmy_A 167 KLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIG 246 (400)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHC
T ss_pred eeecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999987777888889999999999999999988889 555 46788888888888889
Q ss_pred CCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHH
Q 009167 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA 468 (541)
Q Consensus 389 ~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~ 468 (541)
..+++..+++++++++++..|++++.+++++++++|+++|.|.+|.||+++++|+|++++++++|+|+|++|+++++.+.
T Consensus 247 ~~~~~~~a~~~l~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~ 326 (400)
T 3nmy_A 247 GVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDA 326 (400)
T ss_dssp CBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHH
T ss_pred CCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999876677
Q ss_pred HHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 469 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 469 ~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
+.+|+++++++++++|+|+.+|++++|+.++|..++++.+.++|+.+++||||+|+|+++|+++||++||+
T Consensus 327 ~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 327 AKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp HHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred HHHHHHcCCcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999985
No 5
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=100.00 E-value=2.3e-60 Score=506.65 Aligned_cols=383 Identities=27% Similarity=0.452 Sum_probs=348.5
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcc-cCCCccCCCCchhHHHHHHHHHHHhCCCcEEE
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKR-RASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~-~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~ 230 (541)
+++|+++|+|...+ ..+++++||||+|+||.|++.+++.+.+.+. ..+|.|+|+++|+.+++|++||+++|++++++
T Consensus 25 ~~~t~~~~~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~ 102 (415)
T 2fq6_A 25 KLDTQLVNAGRSKK--YTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVL 102 (415)
T ss_dssp CHHHHHHHTTCCHH--HHTTBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTSCCCTTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CcCceeEeCCCCCC--CCCCCEeCCeecccceeeCCHHHHHHhhccccCCCccccCCCCchHHHHHHHHHHHhCCCeEEE
Confidence 47899999997643 3478999999999999999998887776554 56799999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCC
Q 009167 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (541)
Q Consensus 231 ~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG 310 (541)
++||++|+++++.+++++||+||++.++|++++..+...+++.|+++++++.+|+++|++++++ +|++|++|+|+||+|
T Consensus 103 ~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~-~tklV~~e~~~NptG 181 (415)
T 2fq6_A 103 FPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQP-NTKIVFLESPGSITM 181 (415)
T ss_dssp ESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCT-TEEEEEEESSCTTTC
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhcc-CCcEEEEECCCCCCC
Confidence 9999999999999999999999999999999988887777888999999999999999999987 499999999999999
Q ss_pred ccccHHHHHHHHHh--CCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcC
Q 009167 311 RCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG 388 (541)
Q Consensus 311 ~i~dl~~Ia~la~~--~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G 388 (541)
.++|+++|+++|++ +|+++|+|++|+.++...++.+|+|++++|+||+++|++++++|+++++++++++++......|
T Consensus 182 ~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G 261 (415)
T 2fq6_A 182 EVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMG 261 (415)
T ss_dssp CCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTT
T ss_pred EeecHHHHHHHHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcC
Confidence 99999999999999 9999999999998877778888999999999999999998889999999888888887777778
Q ss_pred CCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC--H
Q 009167 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD--L 466 (541)
Q Consensus 389 ~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~--~ 466 (541)
..+++..+++++++++++..|++++.+++..++++|+++|.+.++.||+++++|+|+++++++++.|++++|++++. .
T Consensus 262 ~~~~~~~a~~~~~~l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~ 341 (415)
T 2fq6_A 262 QMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNN 341 (415)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCH
T ss_pred CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCH
Confidence 88899999999999999999999999999999999999999999999999999999999999989999999999873 6
Q ss_pred HHHHHHHHHccCcCeecccCCccccccc--CccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 467 TATIKFIDALKIPYIAPSFGGCESIVDQ--PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 467 ~~~~~~l~~L~~~~iavS~G~~~sl~~~--pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+.+.+|++.|+++++++|+|+++|++.+ |+.++|... ..++|+.+++||||+|+|+++|+|++|.++|+++
T Consensus 342 ~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~----~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~~ 414 (415)
T 2fq6_A 342 EELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRP----QGEIDFSGTLIRLHIGLEDVDDLIADLDAGFARI 414 (415)
T ss_dssp HHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCT----TCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccc----hhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHhh
Confidence 7899999999999999999999999988 877765321 0246788899999999999999999999999864
No 6
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=100.00 E-value=6.7e-58 Score=483.63 Aligned_cols=375 Identities=37% Similarity=0.583 Sum_probs=347.6
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|+|..++ ..++++.||||++++|.|++.+ +...+|.|+|+++|..++||++||+++|.++++++
T Consensus 17 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~-------~~~~~~~y~r~~~~~~~~l~~~la~~~g~~~~~~~ 87 (392)
T 3qhx_A 17 GLATRAIHSGYRPD--PATGAVNAPIYASSTFAQDGVG-------GLRGGYEYARTGNPTRTALEAALAAVEDAAFGRAF 87 (392)
T ss_dssp CHHHHHHHSSCCCC--TTTCBSSCCBCCCSBBCCSSTT-------CCBTTBCBTTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CcchhheeCCCCCC--CCCCCccCCcccCcceEecCcc-------cccCCccccCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 47999999997653 3589999999999999998753 23457999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++.++|+++...+...++..|+++.+++.+|+++|++++++ ++++|++|+|+||+|.
T Consensus 88 ~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 166 (392)
T 3qhx_A 88 SSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRP-TTRLIWVETPTNPLLS 166 (392)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCT-TEEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCC-CCeEEEEECCCCCCcE
Confidence 999999999999999999999999999999888877777888999999999999999999987 5999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~~ 390 (541)
+.|+++|+++|+++|+++|+|++|+.++..++..+++|++++|+||++++++++++|+++++ +++.+.++.....+|..
T Consensus 167 ~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~ 246 (392)
T 3qhx_A 167 IADIAGIAQLGADSSAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAV 246 (392)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCC
T ss_pred EecHHHHHHHHHHcCCEEEEECCCcccccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999998888888889999999999999999998889999987 58888888887778888
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~ 470 (541)
.++..+++++++++++..+++++.+++++++++|+++|.+..+.||+++++|+|++++++++|.|++++|+++++.+.++
T Consensus 247 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~ 326 (392)
T 3qhx_A 247 PGPFDAYLTMRGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAE 326 (392)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHH
T ss_pred CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987667889
Q ss_pred HHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
+|++.|+++++++|+|+.++++++|..++|..++.+ .+|+.+++||||+|.|+++|++++|.++|+
T Consensus 327 ~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~g~~~~~iRlSvg~e~~~~~i~~l~~al~ 392 (392)
T 3qhx_A 327 QLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLDDLKQALG 392 (392)
T ss_dssp HHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTT---BCCCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred HHHHhCCCceECCCCCCCCceeeCcccccccccCHH---HcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999887765 688999999999999999999999999984
No 7
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=100.00 E-value=2.6e-56 Score=470.65 Aligned_cols=384 Identities=35% Similarity=0.562 Sum_probs=353.5
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|+| .. ..++++.||||+|+||.|++.+++.+.+.+...+|.|+||++|..++||++||+++|.++++++
T Consensus 5 ~~~t~~~~~~-~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~i~~ 80 (389)
T 3acz_A 5 DITTTLLHPK-GD---HVLHSHAYPIFQTSTFCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIEGAAGSAAF 80 (389)
T ss_dssp CHHHHHHSCS-SC---CSTTBSSCCBCCCSBBCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcceeEEecC-CC---CCCCCCCCCcccCCceecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 4689999999 32 3479999999999999999998888777666678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++.++|+++...+...++..|+++.+++..|++++++++++ ++++|++|+|+||+|.
T Consensus 81 ~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 159 (389)
T 3acz_A 81 GSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKP-NTKMVYLESPANPTCK 159 (389)
T ss_dssp SSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCT-TEEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCCe
Confidence 999999999999999999999999999999887766656778999999999999999999987 4999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~ 390 (541)
+.|+++|.++|+++|+++|+|++|+.++...++.+++|++++|+||+++++++.++|++++++ +++++++.....+|..
T Consensus 160 ~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~ 239 (389)
T 3acz_A 160 VSDIKGIAVVCHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSL 239 (389)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCC
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999887766777889999999999999999877779999998 8999888777667888
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~ 470 (541)
.++..+++++++++++..|++++.++++.++++|++++.++++.+|+|+++|++.++.+++++.|++++|++++ .+...
T Consensus 240 ~~~~~~~~~~~~l~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~-~~~~~ 318 (389)
T 3acz_A 240 MAPMDAFLCARGMKTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS-FEAAK 318 (389)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-HHHHH
T ss_pred CCHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC-HHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999986 67788
Q ss_pred HHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
++++.++++..++|+|+.+|++++|+.++|..++++++...|+++++||||+|.|++++++++|.++|+++
T Consensus 319 ~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al~~~ 389 (389)
T 3acz_A 319 KLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQALELW 389 (389)
T ss_dssp HHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHTCC
T ss_pred HHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 89999998889999999999999999999999999999999999999999999999999999999999864
No 8
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=100.00 E-value=8.5e-56 Score=469.47 Aligned_cols=377 Identities=36% Similarity=0.609 Sum_probs=335.5
Q ss_pred CccccccccCCcCCCCCCC-CcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEE
Q 009167 152 SDGSLAIHAGERLGRGIVT-DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~-~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~ 230 (541)
+++|+++|+|...+ ..+ +++.+|||+|+||.+++..+ ..+|.|+||++|+..+||++||+++|.++.++
T Consensus 18 ~~~t~~~h~g~~~~--~~~~~~~~~pi~~stt~~~~~~~~--------~~~~~y~r~~~p~~~~l~~~la~~~g~~~~i~ 87 (403)
T 3cog_A 18 HFATQAIHVGQDPE--QWTSRAVVPPISLSTTFKQGAPGQ--------HSGFEYSRSGNPTRNCLEKAVAALDGAKYCLA 87 (403)
T ss_dssp THHHHHHHTTCCGG--GSTTCBSSCCBCCCSCBCCC----------------------CHHHHHHHHHHHHHHTCSEEEE
T ss_pred CcccEEEeCCCCCC--cCCCCCccCCeeccceeecCCccc--------cCCCcccCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 47899999997653 246 89999999999999987532 13588999999999999999999999989999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCC
Q 009167 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (541)
Q Consensus 231 ~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG 310 (541)
++||++|+.+++. ++++||+|+++++.|++++..+...++..|+++.+++.+|+++|++++++ ++++|++++|+||||
T Consensus 88 ~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~-~t~~v~~~~p~nptG 165 (403)
T 3cog_A 88 FASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITP-ETKLVWIETPTNPTQ 165 (403)
T ss_dssp ESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCT-TEEEEEEESSCTTTC
T ss_pred ECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCC
Confidence 9999999999999 89999999999999999887776667888999999999899999999987 599999999999999
Q ss_pred ccccHHHHHHHHHhCC-CEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcC
Q 009167 311 RCVDVKLVSDLCHKKG-AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG 388 (541)
Q Consensus 311 ~i~dl~~Ia~la~~~g-i~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G 388 (541)
.++|+++|+++|+++| +++|+|++|+.+....++.+++|++++|+||+++|++++++|+++++ +++++.++.....+|
T Consensus 166 ~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g 245 (403)
T 3cog_A 166 KVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLG 245 (403)
T ss_dssp CCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHC
T ss_pred eeeCHHHHHHHHHHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcC
Confidence 9999999999999999 99999999998876677778999999999999999988778999985 788888888777788
Q ss_pred CCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHH
Q 009167 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA 468 (541)
Q Consensus 389 ~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~ 468 (541)
...++..+++++++++++..|++++.+++..++++|++++.++++.+|+|+++|+++++.+++++.|++++|.+++..+.
T Consensus 246 ~~~~~~~~~~~~~~l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~~~ 325 (403)
T 3cog_A 246 AVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQH 325 (403)
T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCHHH
T ss_pred CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999866567
Q ss_pred HHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 469 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 469 ~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+|++.++++.+++|+|+.+|++++|+.++|..++.+.+..+|+.+++||||+|.|+++++|++|.++|++
T Consensus 326 ~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~ 397 (403)
T 3cog_A 326 AEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA 397 (403)
T ss_dssp HHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 889999999988899999999999999999999999999999999999999999999999999999999975
No 9
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=2.4e-54 Score=460.60 Aligned_cols=384 Identities=31% Similarity=0.459 Sum_probs=342.1
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|+|...+ ..++++.+|||+|++|.|++.++....+.++..+|.|+|+.+|..+++|++||+++|.+..++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~v~~~ 80 (421)
T 2ctz_A 3 FETLQLHAGYEPE--PTTLSRQVPIYPTTSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGKAALATA 80 (421)
T ss_dssp HHHHHHHTTCCCC--TTTCBSSCCBCCCSCBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred cceeeeeCCCCCC--cCCCCccCCeeccceeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHhCCCceEEec
Confidence 6799999997653 34799999999999999999988777666666789999999999999999999999998899999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe-CCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI-DPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v-d~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
||++|+.+++.+++++||+|+++.++|+++...+...++..|+++.++ +.+|+++|++++++ ++++|++++|+||+|.
T Consensus 81 sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~n~~G~ 159 (421)
T 2ctz_A 81 SGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDE-KTRAWWVESIGNPALN 159 (421)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCT-TEEEEEEESSCTTTCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhcc-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999998877655567789999999 98899999999987 5999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCC-CCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC--hHH----HHHHHH--
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS--GKL----VTQIRN-- 382 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~-a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~--~~l----i~~l~~-- 382 (541)
+.|+++|.++|+++|+++|+|++| +.++..++...++|++++|+||+++++++.+||+++.+ +++ .+.++.
T Consensus 160 ~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~ 239 (421)
T 2ctz_A 160 IPDLEALAQAAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQ 239 (421)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCB
T ss_pred ccCHHHHHHHHHHcCCEEEEECCcccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhcccc
Confidence 999999999999999999999999 77665677788999999999999999887778888863 222 112210
Q ss_pred ------------------------HhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009167 383 ------------------------LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 438 (541)
Q Consensus 383 ------------------------~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l 438 (541)
....+|..+++..+++++++++++..|++++.++++++.++|+++|.+..+.||++
T Consensus 240 ~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~ 319 (421)
T 2ctz_A 240 PGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGL 319 (421)
T ss_dssp GGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTS
T ss_pred chhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCC
Confidence 12346778889999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhhc-cCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCe
Q 009167 439 KSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 517 (541)
Q Consensus 439 ~s~p~~~l~~~~~-~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~ 517 (541)
+++|+|+++++++ ++.|+|++|++++..+...+|+++++++++++++|+.++++++|+.++|..++.+.+..+|+.+++
T Consensus 320 ~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~ 399 (421)
T 2ctz_A 320 PHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEM 399 (421)
T ss_dssp TTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTE
T ss_pred CCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCe
Confidence 9999999999999 799999999998644678899999999999999999999999999999999999889999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHh
Q 009167 518 VRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 518 IRlSvG~e~~edli~dL~~AL~ 539 (541)
||+|+|+|++++++++|++||+
T Consensus 400 vRlS~g~e~~~~li~~l~~al~ 421 (421)
T 2ctz_A 400 VRLSVGLEHVEDLKAELKEALA 421 (421)
T ss_dssp EEEECCSSCHHHHHHHHHHHTC
T ss_pred EEEEeCCCCHHHHHHHHHHHhC
Confidence 9999999999999999999974
No 10
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=7.1e-54 Score=453.12 Aligned_cols=377 Identities=34% Similarity=0.585 Sum_probs=339.0
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|.|...+ .++++.||||+++||.|++.+ .....|.|+|++++..+++|++||+++|.++.+++
T Consensus 7 ~~~t~~~~~~~~~~---~~~~~~~pi~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~lr~~la~~~g~~~~i~~ 76 (393)
T 1n8p_A 7 KFATKAIHAGEHVD---VHGSVIEPISLSTTFKQSSPA-------NPIGTYEYSRSQNPNRENLERAVAALENAQYGLAF 76 (393)
T ss_dssp CHHHHHHHTTCCCC---SSCCSSCCBCCCSBCCBSSSS-------SBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CccceEEecCCCcc---CCCCcCCCcccccceeecccc-------ccccCcceecCCChhHHHHHHHHHHHhCCCcEEEE
Confidence 46899999997642 479999999999999997642 12257999999999999999999999999899999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+||++|+++++. ++++||+|+++.++|++++..+...++..|+++.+++.+| ++|++++++ ++++|++++|+||+|.
T Consensus 77 ~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~l~~~i~~-~t~lv~~~~~~nptG~ 153 (393)
T 1n8p_A 77 SSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-NDLPQLIKE-NTKLVWIETPTNPTLK 153 (393)
T ss_dssp SCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HHHHHHSCS-SEEEEEECSSCTTTCC
T ss_pred CChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HHHHHhccc-CceEEEEECCCCCcce
Confidence 999999999999 9999999999999999887776556788899999999878 999999987 5999999999999999
Q ss_pred cccHHHHHHHHHhC----CCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhh
Q 009167 312 CVDVKLVSDLCHKK----GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHV 386 (541)
Q Consensus 312 i~dl~~Ia~la~~~----gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~ 386 (541)
++|+++|.++|+++ |+++|+|++|+.+...++..+++|++++|+||+++++|+.++|+++++ +++++.++.....
T Consensus 154 ~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~ 233 (393)
T 1n8p_A 154 VTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNA 233 (393)
T ss_dssp CCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHh
Confidence 99999999999999 999999999987654567777999999999999999988778999985 7888888877766
Q ss_pred cCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCC-ceEEeCCCCCCCchhhhHhhhccC-c-ccEEEEEEc
Q 009167 387 LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK-VKRVHYPGLKSHPEHHIATQQMTG-F-GGVVSFEVD 463 (541)
Q Consensus 387 ~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~-v~~v~~P~l~s~p~~~l~~~~~~g-~-g~~vsf~l~ 463 (541)
+|..+++..++++.++++++..++++..+++..+.++|++++. +..+.+|++.++|+++++.+++++ . |++++|+++
T Consensus 234 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~ 313 (393)
T 1n8p_A 234 IGAIPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIK 313 (393)
T ss_dssp HCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEES
T ss_pred cCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeC
Confidence 7888888888888889999999999999999999999999988 888999999999999999998877 7 999999998
Q ss_pred CCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 464 GDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 464 ~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+.......|++.|+++++++|+|++++++.+|+.++|..++.+.+.++|+.+++||||+|.|++++++++|.++|+++
T Consensus 314 ~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 314 GGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp SCHHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 765678999999999999999999999999999999988888888899999999999999999999999999999863
No 11
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=100.00 E-value=2.9e-53 Score=448.29 Aligned_cols=386 Identities=37% Similarity=0.574 Sum_probs=317.7
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|+|...+ ..++++.+|+|++++|.+++.++....+.+....|.|+|+++|..+++|++|++++|.++.+++
T Consensus 9 ~~~t~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~~~~i~~ 86 (398)
T 1gc0_A 9 GFATRAIHHGYDPQ--DHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLAL 86 (398)
T ss_dssp CHHHHHHHTTCCGG--GGTTBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcCceeEeCCCCCC--CCCCCcCCCccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 57899999997643 3578999999999999999887665555566678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++.+.|+++...+...+...|+++.+++..|+++|++++++ ++++|++++|+||||.
T Consensus 87 ~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 165 (398)
T 1gc0_A 87 ASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTP-ATRVIYFESPANPNMH 165 (398)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCT-TEEEEEEESSCTTTCC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCcc
Confidence 999999999999999999999999999999887775556778999999999999999999987 5999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHH-HHHHHhhh-cCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHV-LGG 389 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~l~~~~~~-~G~ 389 (541)
+.|+++|.++|+++|+++|+|++|+.+....++..++|+++.|+||+++++++.++|+++++++.++ .++..... +|+
T Consensus 166 ~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~ 245 (398)
T 1gc0_A 166 MADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGA 245 (398)
T ss_dssp CCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCC
T ss_pred cccHHHHHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCC
Confidence 9999999999999999999999998765555667889999999999999998777899999988765 56655555 677
Q ss_pred CchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHH
Q 009167 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 469 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~ 469 (541)
.+++..+++++++++++..++++..++++.+.++|++++.+.++.+|+++++|+++++.+++++.|++++|++++..+..
T Consensus 246 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (398)
T 1gc0_A 246 VLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAG 325 (398)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHHHHH
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCCHHHH
Confidence 88899999888999999999999999999999999999999999999999999999999988889999999998644668
Q ss_pred HHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.++++.+++.++++|+|+.++++++|..++|..++.+.+..+|+.+++||||+|.+++++++++|.++|++
T Consensus 326 ~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 326 RRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp HHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999975
No 12
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=4.7e-51 Score=432.93 Aligned_cols=385 Identities=33% Similarity=0.574 Sum_probs=345.4
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|+|.. + ..++++.+|+|.++++.++..++..+.+.+..+.|.|++.++|..++|+++||+++|.++++++
T Consensus 7 ~~~t~~~~~~~~-~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~~~i~~ 83 (404)
T 1e5e_A 7 TPATACIHANPQ-K--DQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVAT 83 (404)
T ss_dssp CHHHHHHHSSCC-C--CTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CccceeeecCCC-C--CCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCCcEEEe
Confidence 368999999875 3 2468999999999999999987766655556678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
++|++|+.+++.+++++||+|+++.+.|+++...+...++..|+++.+++..|+++|++++++ ++++|++++|+||||.
T Consensus 84 ~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~t~~v~l~~p~NptG~ 162 (404)
T 1e5e_A 84 SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKP-NTKIVYFETPANPTLK 162 (404)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCT-TEEEEEEESSCTTTCC
T ss_pred CChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCC-CCcEEEEECCCCCCCc
Confidence 999999999999999999999999999999887665556778999999998899999999987 5999999999999999
Q ss_pred cccHHHHHHHHHh-CCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHH-HHHHHhhhc-C
Q 009167 312 CVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVL-G 388 (541)
Q Consensus 312 i~dl~~Ia~la~~-~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~l~~~~~~~-G 388 (541)
++|+++|+++|++ +|+++|+|++|+.+....++.+++|+++.|+||+++++++.++|++++++++++ .++.....+ |
T Consensus 163 v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g 242 (404)
T 1e5e_A 163 IIDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITG 242 (404)
T ss_dssp CCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCC
T ss_pred ccCHHHHHHHHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCC
Confidence 9999999999999 999999999999876556667899999999999999998766799999998888 787766555 7
Q ss_pred CCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHH
Q 009167 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA 468 (541)
Q Consensus 389 ~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~ 468 (541)
..++++.++++.++++++..+++++.++++.+.++|++++.+.++.+|+|.++|+++++.+++++.|+++.|++++..+.
T Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 322 (404)
T 1e5e_A 243 SVISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEG 322 (404)
T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHH
T ss_pred CCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCCHHH
Confidence 77888889998999999988999999999999999999999999999999999999999999889999999999754356
Q ss_pred HHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 469 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 469 ~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+++++++++..++++|+.+|++++|+.++|..++.+.+...|+++++||||+|.|+.++++++|++++++
T Consensus 323 ~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~e~~~~li~~l~~al~~ 394 (404)
T 1e5e_A 323 AKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGIEDADELIADFKQGLDA 394 (404)
T ss_dssp HHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 778899888888899999999999999999999999999999999889999999999999999999999874
No 13
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-50 Score=429.53 Aligned_cols=381 Identities=32% Similarity=0.505 Sum_probs=339.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|+++|+|...+ .+++++||||++++|.|++.+.+.+.+. ...+|.|+|+.++..+++|+++++++|.+++++++
T Consensus 3 ~~t~~~~~~~~~~---~~~~~~~pi~~s~~~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~~~~~ 78 (412)
T 2cb1_A 3 YTTLAVLAGLPED---PHGAVGLPIYAVAAYGFKTLEEGQERFA-TGEGYVYARQKDPTAKALEERLKALEGALEAVVLA 78 (412)
T ss_dssp HHHHHHHTTCCCC---TTCCSSCCCCCCSBCCCSSHHHHHHHHH-HCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred ccceeeecCCCcC---CCCCcCCCccccceeecCChHHHHHHhc-cccCcCcCCCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 6799999997642 4789999999999999999988777655 45679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
||++|+.+++.+++++||+|+++.++|++++..+...++..|+++.+++.+ +++|++++++ ++++|++++|+||+|.+
T Consensus 79 ~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~l~~~i~~-~~~~v~~~~~~n~~G~~ 156 (412)
T 2cb1_A 79 SGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE-PEAVREALSA-KTRAVFVETVANPALLV 156 (412)
T ss_dssp SHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS-HHHHHHHCCT-TEEEEEEESSCTTTCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-HHHHHHHhcc-CCeEEEEeCCCCCCccc
Confidence 999999999999999999999999999988777665577789999998864 9999999987 59999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEEECCccccCCCCCceEEEEEeCh-----------------
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG----------------- 374 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~----------------- 374 (541)
.|+++|.++|+++|+++|+|++|+.+ +...+...++|+++.|+||+++++++.+||+++.++
T Consensus 157 ~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 236 (412)
T 2cb1_A 157 PDLEALATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKG 236 (412)
T ss_dssp CCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC----
T ss_pred ccHHHHHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccc
Confidence 99999999999999999999999887 666777788999999999999988876788887763
Q ss_pred ----------HHHHHHHHHh-hhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCch
Q 009167 375 ----------KLVTQIRNLH-HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPE 443 (541)
Q Consensus 375 ----------~li~~l~~~~-~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~ 443 (541)
++.+.++... ...|..+++..+++++.+++.+..++++..++++++.++|.+++.+..+.+|++.++|+
T Consensus 237 ~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~ 316 (412)
T 2cb1_A 237 QIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPA 316 (412)
T ss_dssp ---HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTT
T ss_pred cchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcc
Confidence 4455555543 44566678888998888999998899888899999999999999998899999999999
Q ss_pred hhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec
Q 009167 444 HHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG 523 (541)
Q Consensus 444 ~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG 523 (541)
|+++++++++.|++++|.+ ++.+...+++++++++. +.|+|+.++++++|+...|..++++.+.++|+.++.||+|+|
T Consensus 317 ~~~~~~~~~~~~~iv~~~~-~~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g 394 (412)
T 2cb1_A 317 HRNARKYLASGGPILTLDL-GDLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVG 394 (412)
T ss_dssp HHHHHHHCSSSCSEEEEEC-SSHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECC
T ss_pred HHHHHHhCCCCceEEEEEe-CCHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEec
Confidence 9999999999999999999 67678889999998888 899999999999999889988999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhC
Q 009167 524 VEDFEDLKADVLQALHAI 541 (541)
Q Consensus 524 ~e~~edli~dL~~AL~~i 541 (541)
.+++++++++|.++|+++
T Consensus 395 ~~~~~~~i~~l~~al~~~ 412 (412)
T 2cb1_A 395 LEDPLDLLALFEEALEAV 412 (412)
T ss_dssp SSCHHHHHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHHHHhhC
Confidence 999999999999999863
No 14
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=1.8e-48 Score=411.08 Aligned_cols=386 Identities=37% Similarity=0.639 Sum_probs=339.7
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
++.|+++|+|...+ ..+.++.+|++.++++.++...+....+.+....|.|+|++++..+++++++++++|.++.+++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~i~~ 85 (398)
T 2rfv_A 8 GFNTQIVHAGQQPD--PSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLAT 85 (398)
T ss_dssp CHHHHHHHTTCCCC--TTTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCceeEeecCCcCc--cCCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 46899999997643 3468899999999999999887655544455678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
++|++|+.+++.+++++||+|+++.++|+++...+...++..|+++.+++..|+++|++++++ ++++|++++|+||||.
T Consensus 86 ~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 164 (398)
T 2rfv_A 86 ASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRP-ETKVVYIETPANPTLS 164 (398)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCT-TEEEEEEESSBTTTTB
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCC-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999877665555677999999999999999999987 5999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHH-HHHHHhhhc-CC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVL-GG 389 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~l~~~~~~~-G~ 389 (541)
+.|+++|.++|+++|+++|+|++|+.+....+..+++|+++.|+||++++++..++|++++++++++ .++.....+ |.
T Consensus 165 ~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 244 (398)
T 2rfv_A 165 LVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGG 244 (398)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCC
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999998776556677789999999999999888666799999998887 666666666 77
Q ss_pred CchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHH
Q 009167 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 469 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~ 469 (541)
..++..++++.+.++.+..++++..++++.+.++|++++.++.+.+|+|+++|++.+..+++++.|++++|++++.....
T Consensus 245 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 324 (398)
T 2rfv_A 245 CMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAG 324 (398)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHH
T ss_pred CCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHH
Confidence 78888888888889888888999999999999999999999999999999999999998887888999999997544567
Q ss_pred HHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.++++.++..++++++|+.++++++|...+|..++.+.+...|+.++.||||+|.+++++++++|.++|++
T Consensus 325 ~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 325 RRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp HHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 88999998889999999999999999888888888888888999899999999999999999999999975
No 15
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=9.3e-47 Score=396.13 Aligned_cols=378 Identities=33% Similarity=0.554 Sum_probs=326.9
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009167 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~ 231 (541)
+++|+++|.|...+ ..++++.||||++++|.|++.+ ...+|.|+||+++...+++++||+++|.++.+++
T Consensus 4 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~ 73 (386)
T 1cs1_A 4 KQATIAVRSGLNDD--EQYGCVVPPIHLSSTYNFTGFN--------EPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLT 73 (386)
T ss_dssp CHHHHHHHTTTTCC--TTTCBSSCCBCCCSBBCCSBTT--------BCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcceeEEecCCCcc--ccCCCCCCCccccceeeccccC--------CCCCcceeCCCCccHHHHHHHHHHHhCCCcEEEe
Confidence 46799999997542 3479999999999999997532 2357999999999999999999999999889999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc
Q 009167 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~ 311 (541)
++|++|+.+++.+++++||+|+++.++|++++..+...++..|+++.+++..|+++|++++++ ++++|++++|+||||.
T Consensus 74 ~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 152 (386)
T 1cs1_A 74 NTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAE-KPKLVLVESPSNPLLR 152 (386)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHT-CCSEEEEECSCTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhcc-CCcEEEEeCCCCCCCc
Confidence 999999999999999999999999999998777665556778999999998899999999987 4999999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCCC
Q 009167 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~ 390 (541)
+.|+++|.++|+++|+++|+|++|+.+....+...++|+++.|+||++++++.+++|++++++ ++++.++.....++..
T Consensus 153 ~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~ 232 (386)
T 1cs1_A 153 VVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVT 232 (386)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCB
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999877655566778999999999999988766679999876 7888888776666777
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHH
Q 009167 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~ 470 (541)
.++..++.+.++++.+..++++..++++.+.++|++++.+..+.+|++.+.|++.++..+.++.|++++|.+++..+...
T Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (386)
T 1cs1_A 233 GGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLR 312 (386)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHH
T ss_pred CCHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCCHHHHH
Confidence 78888888778888888888888999999999999999998899999999999999988888899999999976534455
Q ss_pred HHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
++++...+...+.++|+.++++++|..+.|...+.+.+..+|+.++.||||++.+++++++++|.++|++
T Consensus 313 ~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~ 382 (386)
T 1cs1_A 313 RFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRA 382 (386)
T ss_dssp HHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHhCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHH
Confidence 5555444433344489999999999988888888888888899889999999999999999999999875
No 16
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=2e-46 Score=404.74 Aligned_cols=375 Identities=33% Similarity=0.584 Sum_probs=328.8
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCccCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009167 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~v~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~s 232 (541)
++|..+|.+...+ ..+++.+||++++++.+++.. ..+.|.|+|+++|..+++++++++++|.+++++++
T Consensus 87 ~~~~~i~l~~g~~---~~~~~~~~i~~a~~~~~~~~~--------~~~~~~Y~~~g~~~~~~l~~~la~~~g~~~~i~~~ 155 (464)
T 1ibj_A 87 VSTLLVNLDNKFD---PFDAMSTPLYQTATFKQPSAI--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFT 155 (464)
T ss_dssp HHHHHTCCCCSSC---TTCCSSCCCCCCSBCCCSSSS--------CCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred cCCeEEECCCCCC---CCCCCCccHHhhhhhhhhccc--------ccCCccccCCCCHHHHHHHHHHHHHhCCCeEEEEC
Confidence 6778888875321 257899999999998866431 23468899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
+|++|+.+++. ++++||+|+++.+.|+++...+....+..|+++.+++..|+++|++++++ ++++|++++|+||||.+
T Consensus 156 sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~-~tk~v~l~~p~NptG~v 233 (464)
T 1ibj_A 156 SGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGP-QTKLVWLESPTNPRQQI 233 (464)
T ss_dssp SHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCS-SEEEEEECSSCTTTCCC
T ss_pred CHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhcc-CceEEEEeCCCCCCCEe
Confidence 99999988875 88999999999999999877665567778999999999999999999987 59999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCCCc
Q 009167 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~~ 391 (541)
+|+++|+++|+++|++||+||+|..+....+..+++|++++|+||+++|++++++|++++++ ++++.++......|..+
T Consensus 234 ~~l~~i~~la~~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~ 313 (464)
T 1ibj_A 234 SDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGL 313 (464)
T ss_dssp CCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBC
T ss_pred ecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999877655667789999999999999988777789999985 78888887776678888
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHH
Q 009167 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~ 471 (541)
+++.+++++++++++..|+++..+++..++++|++++.++++.+++|..+|+++++.++.++.|++++|+++ +.+....
T Consensus 314 ~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~-~~~~~~~ 392 (464)
T 1ibj_A 314 APFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-SVALSKH 392 (464)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS-CHHHHHH
T ss_pred CHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC-CHHHHHH
Confidence 898999988999999999999999999999999999999999999999999999988888889999999996 3445667
Q ss_pred HHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
|++.|+..++++++|+.++++++|+.++|..++.+.+...|+.+++||||+|.|+.++++++|+++|+++
T Consensus 393 ~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~edi~~li~~L~~al~~~ 462 (464)
T 1ibj_A 393 LVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTF 462 (464)
T ss_dssp HHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCSSCHHHHHHHHHHHHHSC
T ss_pred HHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHhhc
Confidence 9999999999999999999999998888877766666677888899999999999999999999999763
No 17
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=100.00 E-value=3.2e-40 Score=338.19 Aligned_cols=326 Identities=36% Similarity=0.589 Sum_probs=285.0
Q ss_pred HHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhcc
Q 009167 214 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALN 293 (541)
Q Consensus 214 ~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~ 293 (541)
+||++||+++|.++.++++||++|+.+++.+++++||+|+++.++|+++...+...++..|+++.+++..|+++++++++
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~ 81 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK 81 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc
Confidence 68999999999999999999999999999999999999999999999977666444556799999999889999999998
Q ss_pred CCCceEEEEeCCCCCCCccccHHHHHHHHHh-CCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe
Q 009167 294 NNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG 372 (541)
Q Consensus 294 ~~~tklV~lesP~NPtG~i~dl~~Ia~la~~-~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~ 372 (541)
+ ++++|++++|+||||.+.|+++|.++|++ +|+++|+|++|+.+....+...++|+++.|+||++++++..++|++++
T Consensus 82 ~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~~~~~r~~G~~~~ 160 (331)
T 1pff_A 82 P-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGHTDVVAGLVCS 160 (331)
T ss_dssp T-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSSSSCCCEEEEE
T ss_pred C-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccCCCCCceEEEEEe
Confidence 7 59999999999999999999999999999 999999999998654434556789999999999999887555799999
Q ss_pred Ch-HHHHHHHHHhhh-cCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhh
Q 009167 373 SG-KLVTQIRNLHHV-LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQ 450 (541)
Q Consensus 373 ~~-~li~~l~~~~~~-~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~ 450 (541)
++ ++++.++..... .|...++..++.+.++++.+..++++..++.+.+.++|++++.+..+.++.+.+.|++.++..+
T Consensus 161 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~ 240 (331)
T 1pff_A 161 RADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQ 240 (331)
T ss_dssp CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhh
Confidence 98 888888876665 5667788888888888888888888889999999999999988888899999988888888877
Q ss_pred ccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009167 451 MTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 530 (541)
Q Consensus 451 ~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edl 530 (541)
.++.|++++|.++ +.+...++++...++..++|+|+.+|++++|+...|..++.+.+..+|+.++.||||+|.++++++
T Consensus 241 ~~~~~~~~~~~~~-~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~ 319 (331)
T 1pff_A 241 MKMFGSMIAFDVD-GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDI 319 (331)
T ss_dssp CSSCCSEEEEECS-SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHH
T ss_pred CCCCceEEEEEEC-CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHH
Confidence 7788999999997 445666667666555558899999999999888888888888888899988999999999999999
Q ss_pred HHHHHHHHhhC
Q 009167 531 KADVLQALHAI 541 (541)
Q Consensus 531 i~dL~~AL~~i 541 (541)
+++|.++|+++
T Consensus 320 i~~l~~~l~~~ 330 (331)
T 1pff_A 320 IDDLKQALDLV 330 (331)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 99999999864
No 18
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=100.00 E-value=2.5e-34 Score=306.62 Aligned_cols=324 Identities=19% Similarity=0.248 Sum_probs=258.3
Q ss_pred cCCCccCCCCchhHHHHHHHHHHHhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcC-CCCcchHHHH-------H
Q 009167 199 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFI-------E 267 (541)
Q Consensus 199 ~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~---~sSGs~Ai~~al~all~pGd~Vlv~~-~~y~~~~~~~-------~ 267 (541)
..+|.|+|. ..++||+++|+++|.+.+++ ++||++|+.+++.++++|||+|++++ +.|+++...+ .
T Consensus 65 ~~gy~y~~~---~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~ 141 (427)
T 3i16_A 65 SSGYGYGDI---GRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNM 141 (427)
T ss_dssp CCTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSS
T ss_pred CCCCCCCHH---HHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchH
Confidence 345666665 58999999999999998888 89999999999999999999999999 9999887665 1
Q ss_pred hhcccCCeEEEEeCC-----CCHHHHHHhcc--CCCceEEEEeC----CCCCCCccccHHHHHHHHHh--CCCEEEEeCC
Q 009167 268 TVLPKMGITATVIDP-----ADMEGLEAALN--NNNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGT 334 (541)
Q Consensus 268 ~~l~~~Gi~v~~vd~-----~d~e~Le~al~--~~~tklV~les----P~NPtG~i~dl~~Ia~la~~--~gi~lIvDea 334 (541)
..++..|+++++++. .|+++|+++++ + ++|+|++++ |+||+|.+.|+++|+++|++ +|+++|+|++
T Consensus 142 ~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~-~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a 220 (427)
T 3i16_A 142 GSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDE-SITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNC 220 (427)
T ss_dssp CCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCT-TEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCC-CCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 456677999999987 58999999998 5 599999999 99999999999999999999 9999999999
Q ss_pred CCCCC-cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH--hhhcCCCchH-HH-HHHHHHhHHHHHHH
Q 009167 335 FATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLGGALNP-NA-AYLIIRGMKTLHLR 409 (541)
Q Consensus 335 ~a~~~-~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~--~~~~G~~~s~-~~-a~l~l~~l~tl~~r 409 (541)
|+.+. ...+...|+|++++|+||+++|+++.++|+++++++++++++.. ...+|..+++ +. +++++++++++..|
T Consensus 221 ~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~~~r 300 (427)
T 3i16_A 221 YGEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLAPHI 300 (427)
T ss_dssp TTTTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHH
T ss_pred CccccccCCccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHHHHHHHHHHHHHHHHH
Confidence 99887 67788889999999999999999888899999999999998873 3344444444 44 78889999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccC---
Q 009167 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG--- 486 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G--- 486 (541)
++++.+++..++++|++++. +| +|+ +++|.|++ +++|.+. +.+.+.+|+++|+.+....|+-
T Consensus 301 ~~~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~~----------i~~i~l~-~~~~~~~f~~~l~~~~~~~s~~~p~ 365 (427)
T 3i16_A 301 SMEALKGAILCSRIMELAGF--EV-MPK-YDEKRSDI----------IQSIKFN-DKDKLIEFCKGIQTGSPIDSFVSCE 365 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------CEEEECS-SHHHHHHHHHHHHHTCSSSTTSCCC
T ss_pred HHHHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCccE----------EEEEEEC-CHHHHHHHHHHHhhcCcccccccCc
Confidence 99999999999999999986 66 888 78887765 8999996 6688999999998876554432
Q ss_pred -----CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 487 -----GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 487 -----~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
|++.-+...+-+.-..-+.+.-.+-.+.+.++...-|-.+.+...-.+.+|++++
T Consensus 366 ~~~~~gy~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
T 3i16_A 366 PWDMPGYTDQVIMAAGAFIQGSSIELSADAPIREPYIAYLQGGLTFDHAKIGILIALSRI 425 (427)
T ss_dssp CBCC---CCCEEEEECCSSTTCSSSSEEEEESCTTCEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCceeeccCcCCCCccccccCCCCCCCCeEEEEcCCccHHHHHHHHHHHHHHH
Confidence 2221111110000000000111122345678888889889888888888888764
No 19
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.3e-33 Score=301.09 Aligned_cols=320 Identities=19% Similarity=0.253 Sum_probs=256.3
Q ss_pred cCCCccCCCCchhHHHHHHHHHHHhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcC-CCCcchHHHHH-------
Q 009167 199 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------- 267 (541)
Q Consensus 199 ~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~---~sSGs~Ai~~al~all~pGd~Vlv~~-~~y~~~~~~~~------- 267 (541)
..+|.|+|+ ..++||+++|+++|.+.+++ ++||++|+.+++.++++|||+|++++ +.|+++..++.
T Consensus 66 ~~gy~Y~~~---g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~ 142 (427)
T 3hvy_A 66 SSGYGYNDI---GRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKV 142 (427)
T ss_dssp CCTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCS
T ss_pred CcCCCCCch---hHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhh
Confidence 346777765 58999999999999998888 89999999999999999999999999 99998775551
Q ss_pred hhcccCCeEEEEeCC----CCHHHHHHhcc--CCCceEEEEeC----CCCCCCccccHHHHHHHHHh--CCCEEEEeCCC
Q 009167 268 TVLPKMGITATVIDP----ADMEGLEAALN--NNNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTF 335 (541)
Q Consensus 268 ~~l~~~Gi~v~~vd~----~d~e~Le~al~--~~~tklV~les----P~NPtG~i~dl~~Ia~la~~--~gi~lIvDea~ 335 (541)
..++..|++++.++. .|+++|+++++ + ++|+|++++ |+||+|.+.|+++|+++|++ +|+++++|++|
T Consensus 143 ~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~-~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~ 221 (427)
T 3hvy_A 143 GSLREYGVKYKMVDLKDGKVDINTVKEELKKDD-SIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCY 221 (427)
T ss_dssp CCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCT-TEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred hHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCC-CCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence 346678999999987 79999999998 6 599999999 99999999999999999999 89999999999
Q ss_pred CCCC-cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCCch--HHHHHHHHHhHHHHHHHH
Q 009167 336 ATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALN--PNAAYLIIRGMKTLHLRV 410 (541)
Q Consensus 336 a~~~-~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~s--~~~a~l~l~~l~tl~~r~ 410 (541)
+.+. ..++...|+|++++|+||+++|+++.+||+++++++++++++... ...|...+ ...++++++++++++.|+
T Consensus 222 ~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~~~r~ 301 (427)
T 3hvy_A 222 GEFVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMAPHVT 301 (427)
T ss_dssp CTTTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHH
T ss_pred cccccCCCCcccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHHHHHH
Confidence 9887 578888899999999999999998888999999999999988743 23332222 233788899999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecc------
Q 009167 411 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS------ 484 (541)
Q Consensus 411 ~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS------ 484 (541)
+++.+++..++++|++++. +| +|+ +++|.|++ +++|.+. +.+.+.+|+++|+.+....|
T Consensus 302 ~~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~l----------i~~~~l~-~~~~~~~f~~~l~~~~~~~s~~~p~~ 366 (427)
T 3hvy_A 302 IEAVKGAVFCARIMELAGF--DV-LPK-YNDKRTDI----------IQAIKFN-DEKKLIDFIKGIQTASPVDSFVQCEA 366 (427)
T ss_dssp HHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------EEEEECS-SHHHHHHHHHHHHHTCSSSTTCCC--
T ss_pred HHHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCceE----------EEEEeCC-CHHHHHHHHHHhccccccccccCCCC
Confidence 9999999999999999976 56 787 77777654 8999996 66888999999987654433
Q ss_pred --cCCcccccccCccc----cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 485 --FGGCESIVDQPAIM----SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 485 --~G~~~sl~~~pa~~----~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+.|+++.+...+-+ +...++ .+-.+.+.++...-|-.+.+...-.+.+|++++
T Consensus 367 ~~~~Gy~~~~~~~~~~~~~~~~~e~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
T 3hvy_A 367 WDMPGYEDKVIMAAGTFVQGASIELS----ADAPIREPYIGYLQGGLTFDHAKLGVLIALSKL 425 (427)
T ss_dssp --------CEEEECCCSSTTCSSSSE----EEEESCTTCEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CCCCCCcCceeeeccccCCCcccccc----CCCCCCCCeeEEEcCCccHHHHHHHHHHHHHHh
Confidence 33444433222111 111111 122345678889999999999888999998864
No 20
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=100.00 E-value=3e-33 Score=297.02 Aligned_cols=321 Identities=17% Similarity=0.192 Sum_probs=253.0
Q ss_pred cCCCccCCCCchhHHHHHHHHHHHhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcC-CCCcchHHHHH------h
Q 009167 199 RASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------T 268 (541)
Q Consensus 199 ~~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~---~sSGs~Ai~~al~all~pGd~Vlv~~-~~y~~~~~~~~------~ 268 (541)
..+|.|+|. ..++||+++|+++|.+.+++ ++||++|+.+++.+++++||+|+++. +.|.++...+. .
T Consensus 51 ~~~~~y~~~---~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~ 127 (409)
T 3jzl_A 51 STGYGYDDE---GRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQG 127 (409)
T ss_dssp CCTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSS
T ss_pred CcCCCCChh---HHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhh
Confidence 445666654 58899999999999998888 89999999999999999999999998 99998775552 3
Q ss_pred hcccCCeEEEEeCC-----CCHHHHHHhccCCCceEEEEeC----CCCCCCccccHHHHHHHHHh--CCCEEEEeCCCCC
Q 009167 269 VLPKMGITATVIDP-----ADMEGLEAALNNNNVSLFFTES----PTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFAT 337 (541)
Q Consensus 269 ~l~~~Gi~v~~vd~-----~d~e~Le~al~~~~tklV~les----P~NPtG~i~dl~~Ia~la~~--~gi~lIvDea~a~ 337 (541)
.++..|+++++++. .|+++|++++++ +|++|++++ |+||+|.+.|+++|+++|++ +|+++|+|++|+.
T Consensus 128 ~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~-~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~ 206 (409)
T 3jzl_A 128 SLKDFHIGYSSVPLLENGDVDFPRIAKKMTP-KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGE 206 (409)
T ss_dssp CTGGGTCEEEECCCCTTSCCCHHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT
T ss_pred HHHHcCCEEEEeCCCCCCCcCHHHHHHhccC-CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccc
Confidence 56778999999987 699999999987 599999999 99999999999999999999 9999999999998
Q ss_pred CC-cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhh------cCCCchHHHHHHHHHhHHHHHHHH
Q 009167 338 PL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV------LGGALNPNAAYLIIRGMKTLHLRV 410 (541)
Q Consensus 338 ~~-~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~------~G~~~s~~~a~l~l~~l~tl~~r~ 410 (541)
++ ..++...|+|++++|+||+++|+++.+||+++++++++++++..... .|..+. .+++++++++++..|+
T Consensus 207 ~~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~--~~~~~l~gl~~~~~r~ 284 (409)
T 3jzl_A 207 FVEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLY--SLLEMYQGFFLAPHVT 284 (409)
T ss_dssp TTSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT--CHHHHHHHHHHHHHHH
T ss_pred ccccCCccccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHH--HHHHHHHHHhhHHHHH
Confidence 76 56788889999999999999999888899999999999998764322 222222 2456788999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeeccc-----
Q 009167 411 QQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF----- 485 (541)
Q Consensus 411 ~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~----- 485 (541)
+++.+++..++++|++++. ++ +|+ +++|+|++ +++|.++ +.+.+.+|+++|+.+....|+
T Consensus 285 ~~~~~~a~~la~~L~~~g~--~v-~p~-~~~~~~~~----------i~~i~l~-~~~~~~~~~~~L~~~~~~~s~~~p~~ 349 (409)
T 3jzl_A 285 AQAIKGARFTAAMLAEFGV--EA-DPV-WDAPRTDL----------IQSVSFH-NKEKMVAFAQAIQAASPVNAHVLPIG 349 (409)
T ss_dssp HHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------CCEEECS-CHHHHHHHHHHHHHTSSSSTTSCCCC
T ss_pred HHHHHHHHHHHHHHHhCCC--cc-cCC-CCCCCccE----------EEEEEeC-CHHHHHHHHHHHHhcCcccccCCCCC
Confidence 9999999999999999976 56 787 77777654 8899996 668889999999877644332
Q ss_pred ---CCcccccccCccccc-cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 486 ---GGCESIVDQPAIMSY-WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 486 ---G~~~sl~~~pa~~~~-~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
.|++.-+...+-+ + ..-+.+.-.+-.+.+.++...-|-.+.+...-.+.+|++++
T Consensus 350 ~~~~gy~~~~~~~~~~-f~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (409)
T 3jzl_A 350 AYMPGYEDDVIMAAGT-FIQGASLELTADGPIREPYQLYVQGGLTYEHIKIAVTRAIQKI 408 (409)
T ss_dssp BCCTTCSSCEEEECCC-SSTTCSSSCEEEEESSTTTEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCceeEeccc-cCCCcceeecCCCCCCCCeEEEEcCCccHHHHHHHHHHHHHhh
Confidence 2222222111110 0 00000111122345678888889889888888888888763
No 21
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.96 E-value=4.2e-27 Score=245.32 Aligned_cols=284 Identities=11% Similarity=0.099 Sum_probs=214.5
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~L 288 (541)
.+...+++++|++++|.++.+++++|++|+..++.+++++||+|+++.+.|+.+... +...|.++..++..|+++|
T Consensus 83 ~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l 158 (384)
T 1bs0_A 83 SVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEA----ASLSPSQLRRFAHNDVTHL 158 (384)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH----HHTSSSEEEEECTTCHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCcEEEEcccccHHHHHH----HHHcCCCEEEeCCCCHHHH
Confidence 478899999999999998899999999999999999999999999999999876543 3446889999998899999
Q ss_pred HHhccCC--CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc-------cccccCCcEEEECCcccc
Q 009167 289 EAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KALSLGADLVLHSATKFI 359 (541)
Q Consensus 289 e~al~~~--~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~-------~~~~~gaDivv~S~sK~l 359 (541)
++++++. ++++|++++|+||||.+.|+++|.++|+++|++||+|++|+.+... .....+.|+++.|+||++
T Consensus 159 ~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~ 238 (384)
T 1bs0_A 159 ARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF 238 (384)
T ss_dssp HHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT
T ss_pred HHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchh
Confidence 9998753 3789999999999999999999999999999999999998765321 112245899999999999
Q ss_pred CCCCCceEEEEEeChHHHHHHHHHhhh--cCCCchHHHHHHHHHhHHHH-----HHHHHHHHHHHHHHHHHHHhCCCceE
Q 009167 360 GGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEAHPKVKR 432 (541)
Q Consensus 360 gg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~s~~~a~l~l~~l~tl-----~~r~~~~~~~a~~la~~L~~~p~v~~ 432 (541)
++. ||++++++++++.++..... .+...++..+..+...++.+ ....++..++++.+.+.|++++ +.
T Consensus 239 ~~~----GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~- 312 (384)
T 1bs0_A 239 GVS----GAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP-FT- 312 (384)
T ss_dssp SSC----CEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS-CE-
T ss_pred hcc----CcEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC-Cc-
Confidence 854 49999999998888764322 22345665555544444443 3455566677888888887752 32
Q ss_pred EeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcC
Q 009167 433 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 512 (541)
Q Consensus 433 v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~g 512 (541)
+ .| +.|+++++.++. .....++.+.|...++.+..|..+.. .
T Consensus 313 ~-~~----------------~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~--------------------~ 354 (384)
T 1bs0_A 313 L-AD----------------SCSAIQPLIVGD-NSRALQLAEKLRQQGCWVTAIRPPTV--------------------P 354 (384)
T ss_dssp E-CS----------------CCSSBCCEEEES-HHHHHHHHHHHHHTTEECCEECTTSS--------------------C
T ss_pred c-cC----------------CCCCEEEEEeCC-HHHHHHHHHHHHHCCcEEEeecCCCC--------------------C
Confidence 2 12 146678888863 24566777777666877776543210 0
Q ss_pred CCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 513 IMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 513 i~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..++.+||+++...+++.++.+.++|++
T Consensus 355 ~~~~~~Ri~~~~~~~~~~i~~~~~~l~~ 382 (384)
T 1bs0_A 355 AGTARLRLTLTAAHEMQDIDRLLEVLHG 382 (384)
T ss_dssp TTCEEECCBCCTTCCHHHHHHHHHHHHH
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHHHHh
Confidence 1247899999988777777777777764
No 22
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.96 E-value=1.3e-27 Score=251.02 Aligned_cols=305 Identities=15% Similarity=0.151 Sum_probs=216.5
Q ss_pred CccCCCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~al----l~pGd~Vlv~~~~y~~~~~~~~~~l~~~G 274 (541)
+.|+....+...+++++||+++|. +.++++++|++|+.+++.++ +++||+|+++.++|+++...+....+..|
T Consensus 64 ~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g 143 (420)
T 1t3i_A 64 HQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTG 143 (420)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcC
Confidence 445443356788999999999998 57888888999999999999 89999999999999997544444455568
Q ss_pred eEEEEeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCC
Q 009167 275 ITATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGA 348 (541)
Q Consensus 275 i~v~~vd~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~ga 348 (541)
.++..++. .|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+....++
T Consensus 144 ~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~ 222 (420)
T 1t3i_A 144 AVLKFVQLDEQESFDLEHFKTLLSE-KTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDC 222 (420)
T ss_dssp CEEEEECBCTTSSBCHHHHHHHCCT-TEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTC
T ss_pred cEEEEeccCCCCCcCHHHHHHhhCC-CceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCC
Confidence 88888875 489999999987 599999999999999999999999999999999999999886543 24445689
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhh--------------------cCCCchHHHHHHHHH-hHHH--
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------------------LGGALNPNAAYLIIR-GMKT-- 405 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--------------------~G~~~s~~~a~l~l~-~l~t-- 405 (541)
|+++.|+||.+++.| +|++++++++++.++..... +....++..+.+++. .++.
T Consensus 223 di~~~s~sK~~~~~g---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 299 (420)
T 1t3i_A 223 DWLVASGHKMCAPTG---IGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLT 299 (420)
T ss_dssp SEEEEEGGGTTSCTT---CEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEehhhhcCCCc---eEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHH
Confidence 999999999888765 68999999888877543211 111122223322222 2332
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCee
Q 009167 406 ---LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 482 (541)
Q Consensus 406 ---l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~ia 482 (541)
+....++..++++.+.+.|++.+++. +..|.. +. .+.|++++|.+++ .....+.+.|...++.
T Consensus 300 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~---~~--------~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~ 365 (420)
T 1t3i_A 300 DLGMENIHNYEVELTHYLWQGLGQIPQLR-LYGPNP---KH--------GDRAALASFNVAG--LHASDVATMVDQDGIA 365 (420)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHTCTTEE-EESCCG---GG--------SCBCSEEEEEETT--BCHHHHHHHHHTTTEE
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCCeE-EeCCCc---cc--------cccCCEEEEEECC--CCHHHHHHHHHHCCeE
Confidence 33445566678888889998877654 333320 00 0247899999874 1234566777777888
Q ss_pred cccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 483 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 483 vS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
+..|..+.. + .....|. ++.||||++...+++.++.+.++|+
T Consensus 366 v~~~~~~~~---~-----------~~~~~g~-~~~iRis~~~~~~~~~i~~~~~~l~ 407 (420)
T 1t3i_A 366 IRSGHHCTQ---P-----------LHRLFDA-SGSARASLYFYNTKEEIDLFLQSLQ 407 (420)
T ss_dssp CBCSCTTCH---H-----------HHHHTTC-CCCEEEECCTTCCHHHHHHHHHHHH
T ss_pred Eeeccccch---H-----------HHHhcCC-CCeEEEecCCCCCHHHHHHHHHHHH
Confidence 877754321 0 0011232 5789999998655555555555554
No 23
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.96 E-value=9.6e-27 Score=240.76 Aligned_cols=282 Identities=15% Similarity=0.188 Sum_probs=206.9
Q ss_pred cCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
+.+|+++...++++++|+++|. ++++++++|++|+.+++.+++++||+|+++.++|.+.... ++..|.++..++
T Consensus 61 ~~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~ 136 (363)
T 3ffh_A 61 TEIYPDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQN----ALIEGAEVREIP 136 (363)
T ss_dssp CCBC----CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHH----HHHHTCEEEEEE
T ss_pred hhcCCCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHH----HHHcCCEEEEec
Confidence 4566777889999999999996 4678888888999999999999999999999999885543 444688888887
Q ss_pred CC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC--CCEEEEeCCCCCCCc------cc-ccccC
Q 009167 282 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN------QK-ALSLG 347 (541)
Q Consensus 282 ~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~--gi~lIvDea~a~~~~------~~-~~~~g 347 (541)
.+ |+++|++++++ ++++|++++|+||||.++|+++|.++++.+ |+++|+|++|+.... .. ....+
T Consensus 137 ~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 215 (363)
T 3ffh_A 137 LLQDGEHDLEGMLNAIDE-KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYK 215 (363)
T ss_dssp CCTTSCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCT
T ss_pred CCCCCCcCHHHHHHhccc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCC
Confidence 65 89999999987 499999999999999999999999999887 999999999873221 11 11234
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKIL 424 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~L 424 (541)
.++++.|+||.+|.+| ...|++++++++++.++.....+ ..++..++.+...+ +.+..+.++..++++.+.+.|
T Consensus 216 ~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l 292 (363)
T 3ffh_A 216 NLIITRTFSKIYGLAS-ARVGYGIADKEIIRQLNIVRPPF--NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFA 292 (363)
T ss_dssp TEEEEEESSSTTCCSS-CCCEEEEECHHHHHHHHHTCCSC--CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeechhhhcCch-hceeeeecCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688999999998665 34688888999999888765533 34555555554444 445566667778888888999
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCC
Q 009167 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 504 (541)
Q Consensus 425 ~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~ 504 (541)
++++.+. + +|. .|+++++.++.+ ..++.+.|...++.++.|..+
T Consensus 293 ~~~~g~~-~-~~~----------------~~~~~~~~~~~~---~~~~~~~l~~~gi~v~~g~~~--------------- 336 (363)
T 3ffh_A 293 KRFEKVK-L-YPA----------------NGNFVLIDLGIE---AGTIFSYLEKNGYITRSGAAL--------------- 336 (363)
T ss_dssp HHCTTCE-E-CCC----------------CSSEEEEECSSC---HHHHHHHHHHTTEECEETTTT---------------
T ss_pred hhCCCce-E-CCC----------------CCeEEEEECCCC---HHHHHHHHHHCCeEEEeCccC---------------
Confidence 8866653 2 222 467889998743 345566665567777776442
Q ss_pred HHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 505 QSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 505 ~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+. ++.||||++ +++.++.+.++|++
T Consensus 337 -------~~-~~~iRis~~---~~~~i~~~~~~l~~ 361 (363)
T 3ffh_A 337 -------GF-PTAVRITIG---KEEDNSAVIALLEK 361 (363)
T ss_dssp -------TC-TTEEEEECC---CHHHHHHHHHHHHH
T ss_pred -------CC-CCeEEEECC---CHHHHHHHHHHHHH
Confidence 11 579999999 33344555555543
No 24
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.96 E-value=4.2e-27 Score=246.73 Aligned_cols=283 Identities=16% Similarity=0.153 Sum_probs=211.8
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~L 288 (541)
.+...+++++||+++|.++.+++++|++|+..++.+++++||+|+++.+.|+++.. .++..|+++..++..|+++|
T Consensus 89 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~l 164 (401)
T 1fc4_A 89 QDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIID----GVRLCKAKRYRYANNDMQEL 164 (401)
T ss_dssp BHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHH----HHHTSCSEEEEECTTCHHHH
T ss_pred cHHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHcCCCCEEEEcchhHHHHHH----HHHHcCCceEEECCCCHHHH
Confidence 67889999999999999888999999999999999999999999999999987653 34566889988988899999
Q ss_pred HHhccCC-----CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-c--c------ccccCCcEEEEC
Q 009167 289 EAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-Q--K------ALSLGADLVLHS 354 (541)
Q Consensus 289 e~al~~~-----~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~--~------~~~~gaDivv~S 354 (541)
++++++. ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.++. . . ....+.|+++.|
T Consensus 165 ~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s 244 (401)
T 1fc4_A 165 EARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGT 244 (401)
T ss_dssp HHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEE
T ss_pred HHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEec
Confidence 9988641 489999999999999999999999999999999999999963321 1 0 112257999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCC
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPK 429 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~ 429 (541)
+||++++.. ||++++++++++.++.... .+....++..++.+...++.+ ....++..++++.+.+.|+++ +
T Consensus 245 ~sK~~~~~~---gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 320 (401)
T 1fc4_A 245 LGKALGGAS---GGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-G 320 (401)
T ss_dssp SSSTTCSSS---CEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred chhhccCCC---CEEEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-C
Confidence 999995443 5999999999988876442 234556677666666666655 345566677888888888876 2
Q ss_pred ceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHH
Q 009167 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 430 v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
+. + +| +.|+++++.+++ ......+.+.|...++.+..|..+.. +
T Consensus 321 ~~-~-~~----------------~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~---~-------------- 364 (401)
T 1fc4_A 321 FT-L-AG----------------ADHAIIPVMLGD-AVVAQKFARELQKEGIYVTGFFYPVV---P-------------- 364 (401)
T ss_dssp CC-B-CC----------------SSSSEEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTSS---C--------------
T ss_pred Cc-c-cC----------------CCCCEEEEEcCC-hHHHHHHHHHHHHCCcEEeeecCCCC---C--------------
Confidence 21 1 12 157899999974 24556777777666777776543211 0
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 510 KYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
-.++.+||+++...+++.++.+.++|
T Consensus 365 ---~~~~~iRi~~~~~~~~~~i~~~~~~l 390 (401)
T 1fc4_A 365 ---KGQARIRTQMSAAHTPEQITRAVEAF 390 (401)
T ss_dssp ---TTCEEEEEECCTTCCHHHHHHHHHHH
T ss_pred ---CCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 12468999999654444444444444
No 25
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.96 E-value=1.9e-27 Score=249.60 Aligned_cols=304 Identities=14% Similarity=0.084 Sum_probs=216.4
Q ss_pred CCccCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~al---l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
.|.|++...+..+++++++++++|.+ .++++++|++++.+++.++ +++||+|+++.++|+++...+....+..|.
T Consensus 60 ~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~ 139 (406)
T 3cai_A 60 AHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGA 139 (406)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCC
Confidence 34455545778899999999999985 5677777789999999887 789999999999999876655444444688
Q ss_pred EEEEeCCC------CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCC
Q 009167 276 TATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGA 348 (541)
Q Consensus 276 ~v~~vd~~------d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~ga 348 (541)
++.+++.+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|++||+|++++.+.. .+....++
T Consensus 140 ~v~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~ 218 (406)
T 3cai_A 140 KVKWAEVDIETGELPTWQWESLISK-STRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDA 218 (406)
T ss_dssp EEEEECCCTTTCCCCGGGHHHHCCT-TEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCC
T ss_pred eEEEEecCcccCCcCHHHHHHHhCC-CceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCC
Confidence 88888764 89999999987 599999999999999999999999999999999999999876432 33344689
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh---------hcCCCchHHHHHHHHHhHHH--------------
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------VLGGALNPNAAYLIIRGMKT-------------- 405 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~---------~~G~~~s~~~a~l~l~~l~t-------------- 405 (541)
|+++.|+||++|+. +||+++++++++++++.... ...++.+......+...++.
T Consensus 219 d~~~~s~~K~~g~~---~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 295 (406)
T 3cai_A 219 DVVTVNAHAWGGPP---IGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRE 295 (406)
T ss_dssp SEEEEEGGGGTSCS---CEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHH
T ss_pred CEEEeehhhhcCCC---cCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhh
Confidence 99999999988743 23399999888776654321 11233333332222222222
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcC
Q 009167 406 -----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 480 (541)
Q Consensus 406 -----l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~ 480 (541)
+....++..++++++.+.|++.|.+. +..|. ...+++++|.+++. ...++.+.|...+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~--~~~~~~~~L~~~g 358 (406)
T 3cai_A 296 RLAVSMQSADAYLNRVFDYLMVSLRSLPLVM-LIGRP--------------EAQIPVVSFAVHKV--PADRVVQRLADNG 358 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCTTEE-ECCCC--------------SSBCSEEEEEETTB--CHHHHHHHHHHTT
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCCCeE-EcCCc--------------cccCCEEEEEECCc--CHHHHHHHHHHCC
Confidence 33444555677888888888876653 33221 01355899998741 2445666665568
Q ss_pred eecccCCcccccccCccccccCCCHHHHHhcCCC--CCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 481 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM--DNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 481 iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~--~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+.++.|.... ....+|.. .+.||||++..++++.++.+.++|+++
T Consensus 359 i~v~~g~~~~----------------~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 359 ILAIANTGSR----------------VLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp EECEECCSCH----------------HHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred cEEecCChHH----------------HHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 8777765111 01123332 478999999988888888888888764
No 26
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.96 E-value=8.6e-27 Score=243.43 Aligned_cols=286 Identities=15% Similarity=0.132 Sum_probs=211.0
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHH
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~ 287 (541)
..+..++++++|++++|.++.+++++|++|+..++.+++++||+|+++.++|+++.. .++..|.++..++..|+++
T Consensus 86 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~ 161 (399)
T 3tqx_A 86 TQTIHKELEKDISEFLGTDDTILYSSCFDANGGLFETLLGPEDAIISDELNHASIID----GIRLCKAQRYRYKNNAMGD 161 (399)
T ss_dssp CBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHH----HHHSCCSEEEEECTTCTTH
T ss_pred CchHHHHHHHHHHHHHCCCcEEEECchHHHHHHHHHHhcCCCCEEEECCcccHHHHH----HHHHcCCceeEeCCCCHHH
Confidence 457789999999999999999999999999999999999999999999999998654 3455688888898889999
Q ss_pred HHHhccCC-----CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-c------cccc--cCCcEEEE
Q 009167 288 LEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-Q------KALS--LGADLVLH 353 (541)
Q Consensus 288 Le~al~~~-----~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~------~~~~--~gaDivv~ 353 (541)
|++++++. ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.++. . .... .+.|+++.
T Consensus 162 l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~ 241 (399)
T 3tqx_A 162 LEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTG 241 (399)
T ss_dssp HHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEE
T ss_pred HHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEe
Confidence 99888641 489999999999999999999999999999999999999964432 1 1112 26799999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHHHH----HHHHHHHHHHHHHHHHHHHhC
Q 009167 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL----HLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 354 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~tl----~~r~~~~~~~a~~la~~L~~~ 427 (541)
|+||+++|. .||++++++++++.+..... .+.+..++..+..+...++.+ ....++..++++.+.+.|++.
T Consensus 242 s~sK~~~g~---~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (399)
T 3tqx_A 242 TLGKALGGA---SGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL 318 (399)
T ss_dssp ESSSSSCSS---CCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHhcccC---ceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 999999943 36999999999988876433 234456666555555555543 444556667778888888765
Q ss_pred CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHH
Q 009167 428 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 507 (541)
Q Consensus 428 p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~ 507 (541)
++. + .+ ..|+++++.++. ......+.+.|...++.+..+.....
T Consensus 319 -g~~-~-~~----------------~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~---------------- 362 (399)
T 3tqx_A 319 -GFQ-L-VP----------------GNHPIIPVMLGD-AQLATNMADHLLQEGIYVVGFSYPVV---------------- 362 (399)
T ss_dssp -TCC-B-CC----------------CSSSEEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTTS----------------
T ss_pred -CCC-c-CC----------------CCCCEEEEEeCC-HHHHHHHHHHHHHCCCEEeeeCCCCC----------------
Confidence 221 1 11 257799999974 34566777777666776664321100
Q ss_pred HHhcCCCCCeEEEEecCCCH----HHHHHHHHHHHhh
Q 009167 508 RLKYGIMDNLVRFSFGVEDF----EDLKADVLQALHA 540 (541)
Q Consensus 508 ~~~~gi~~~~IRlSvG~e~~----edli~dL~~AL~~ 540 (541)
...++.|||+++...+ +.+++.|.+++++
T Consensus 363 ----~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 395 (399)
T 3tqx_A 363 ----PMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKK 395 (399)
T ss_dssp ----CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ----CCCCceEEEEeecCCCHHHHHHHHHHHHHHHHH
Confidence 0124689999985443 4445555555543
No 27
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.96 E-value=2.1e-27 Score=246.15 Aligned_cols=284 Identities=15% Similarity=0.226 Sum_probs=206.8
Q ss_pred cCCCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+.+|+++...+++++||+++|. ++++++++|++|+.+++.+++++||+|+++.++|.+.... ++..|.++..+
T Consensus 61 ~~~y~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v 136 (367)
T 3euc_A 61 LNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMS----AQFAGLEFVGV 136 (367)
T ss_dssp TTCSCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHH----HHTTTCEEEEE
T ss_pred hhcCCCCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHH----HHHcCCeEEEe
Confidence 4456667789999999999998 4556666667999999999999999999999999986543 44568888877
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhC--CCEEEEeCCCCCCCcc----ccccc
Q 009167 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK--GAIVCIDGTFATPLNQ----KALSL 346 (541)
Q Consensus 281 d~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~--gi~lIvDea~a~~~~~----~~~~~ 346 (541)
+. .|+++|++++++.++++|++++|+||||.+++ +++|+++|++| |+++|+|++|+..... .....
T Consensus 137 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 216 (367)
T 3euc_A 137 PLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDF 216 (367)
T ss_dssp ECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTC
T ss_pred cCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhC
Confidence 63 38999999997634899999999999999976 66788889999 9999999998753221 11234
Q ss_pred CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHH
Q 009167 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 347 gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~ 423 (541)
+.++++.|+||+ +..| ..+|++++++++++.++.....++ .++..++.+...++ .+..+.++..++++.+.+.
T Consensus 217 ~~~i~~~s~sK~-~~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 292 (367)
T 3euc_A 217 GNLLVMRTVSKL-GLAG-IRLGYVAGDPQWLEQLDKVRPPYN--VNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEG 292 (367)
T ss_dssp TTEEEEEECCCT-TSCS-CCEEEEEECHHHHHHHGGGCCSSC--CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecchhh-cccc-cCceeeeeCHHHHHHHHHhCCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 567999999999 5554 457999999999888876554333 44554444444443 3556666777888899999
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCC
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 503 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~ 503 (541)
|+++|.+. + +|. .|+++++.++ + ..++.+.|...++.++.|+.+.
T Consensus 293 l~~~~g~~-~-~~~----------------~~~~~~~~~~-~---~~~l~~~l~~~gi~v~~~~~~~------------- 337 (367)
T 3euc_A 293 MAAHGGVT-V-FPS----------------AANFLLARVP-D---AAQTFDRLLARKVLIKNVSKMH------------- 337 (367)
T ss_dssp HHTSTTCE-E-CCC----------------SSSEEEEECS-C---HHHHHHHHHTTTEECEECGGGC-------------
T ss_pred HHhCCCcE-E-CCC----------------CCeEEEEECC-C---HHHHHHHHHHCCeEEEECCccC-------------
Confidence 98887765 3 332 4678888886 2 3456667777788887765431
Q ss_pred CHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 009167 504 SQSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQAL 538 (541)
Q Consensus 504 ~~~~~~~~gi~~~~IRlSvG~-e~~edli~dL~~AL 538 (541)
+..++.||||++. ++.+.+++.|.+++
T Consensus 338 --------~~~~~~iRis~~~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 338 --------PLLANCLRVTVSTPEENAQFLEAFAASL 365 (367)
T ss_dssp --------GGGTTEEEEECCCHHHHHHHHHHHHHHT
T ss_pred --------CCCCCEEEEecCCHHHHHHHHHHHHHHh
Confidence 0135799999993 23344455554443
No 28
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.96 E-value=1.3e-27 Score=246.98 Aligned_cols=306 Identities=14% Similarity=0.135 Sum_probs=206.3
Q ss_pred CCccCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all----~pGd~Vlv~~~~y~~~~~~~~~~l~~~G 274 (541)
.|.|++...+..+++++++++++|.+ +++++++|++|+.+++.++. ++||+|+++.++|+++...+. .+...|
T Consensus 34 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~-~~~~~g 112 (382)
T 4hvk_A 34 VHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQG 112 (382)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHHHTT
T ss_pred cchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHH-HHHhcC
Confidence 45566667788899999999999985 46667777799999999987 999999999999998776553 345678
Q ss_pred eEEEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCC
Q 009167 275 ITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGA 348 (541)
Q Consensus 275 i~v~~vd~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~ga 348 (541)
+++.+++.+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+ ||+|++++.+.. .+....++
T Consensus 113 ~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~ 190 (382)
T 4hvk_A 113 FEVEYIPVGKYGEVDVSFIDQKLRD-DTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGA 190 (382)
T ss_dssp CEEEEECBCTTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTC
T ss_pred CEEEEeccCCCCCcCHHHHHHHhcc-CceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCC
Confidence 899888754 89999999987 49999999999999999999999999999999 999999876543 33334679
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-------hhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-------~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a 417 (541)
|+++.|+||++|+.| .|+++.+++. .++... ....++.+....+.+...++ .+....++..+++
T Consensus 191 d~~~~s~~K~~g~~g---~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 265 (382)
T 4hvk_A 191 DMLTISSNDIYGPKG---VGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLR 265 (382)
T ss_dssp SEEEEESGGGTSCTT---CEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeHHHhcCCCc---eEEEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999887665 4555554432 111111 11122333333333333333 2344455566777
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcc
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~ 497 (541)
+.+.+.|++.|.+. +..|.- .+.+++++|.+++. ....+.+.|...++.++.|..++.....
T Consensus 266 ~~l~~~L~~~~~~~-~~~~~~-------------~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~~~~~~-- 327 (382)
T 4hvk_A 266 DRIIDNVLKIEESY-LNGHPE-------------KRLPNNVNVRFSYI--EGESIVLSLDMAGIQASTGSACSSKTLQ-- 327 (382)
T ss_dssp HHHHHHHTTSTTEE-ECSCSS-------------SBCTTEEEEEETTC--CHHHHHHHHHHTTCBCBCC--------C--
T ss_pred HHHHHHHhcCCCeE-EeCCcc-------------ccCCCEEEEEECCC--CHHHHHHHHHHCCEEEeeCCccCCCCCc--
Confidence 88888888777653 222210 11356889988752 3455667776678888888665432111
Q ss_pred ccccCCCHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHH
Q 009167 498 MSYWDLSQSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~----~~~IRlSvG~e~~edli~dL~~AL 538 (541)
+......+|+. ++.|||+++...+++.++.+.++|
T Consensus 328 ------~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l 366 (382)
T 4hvk_A 328 ------PSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVL 366 (382)
T ss_dssp ------CCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHH
T ss_pred ------chHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHH
Confidence 11122334443 589999999655444444444443
No 29
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.96 E-value=3.5e-27 Score=244.23 Aligned_cols=282 Identities=13% Similarity=0.195 Sum_probs=208.7
Q ss_pred cCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
+.+|+++...++|++||+++|. ++++++++|++|+.+++.+++++||+|+++.++|.+.... ++..|.++..++
T Consensus 59 ~~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~ 134 (365)
T 3get_A 59 AHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIY----AKQCGAKCYKTQ 134 (365)
T ss_dssp TTSCCCTTCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHH----HHHHTCEEEECS
T ss_pred hccCCCCChHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHH----HHHcCCEEEEEe
Confidence 4455666558999999999995 4678888888999999999999999999999999986543 344688888888
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHH--hCCCEEEEeCCCCCCC---c----cccc---
Q 009167 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH--KKGAIVCIDGTFATPL---N----QKAL--- 344 (541)
Q Consensus 282 ~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~--~~gi~lIvDea~a~~~---~----~~~~--- 344 (541)
. .|+++|++++++ ++++|++++|+||||.++|+++|.++++ ++|+++|+|++|+... . ....
T Consensus 135 ~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 213 (365)
T 3get_A 135 SITHNLDEFKKLYETHKD-EIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELI 213 (365)
T ss_dssp SSSCCHHHHHHHHHHTTT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHH
T ss_pred cCCCCCCCHHHHHHHhCC-CCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHh
Confidence 6 468899999986 5999999999999999999998888887 6799999999987322 1 1111
Q ss_pred -ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHHHHHHHHHHHHHH
Q 009167 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRM 420 (541)
Q Consensus 345 -~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~r~~~~~~~a~~l 420 (541)
..+.++++.|+||.++.+| ...|++++++++++.++.....++ .++..++.+...+ +.+..+.++..++++.+
T Consensus 214 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 290 (365)
T 3get_A 214 KEFDNVLYLGTFSKLYGLGG-LRIGYGIANANIISAFYKLRAPFN--VSNLALKAAVAAMDDDEFTEKTLENNFSQMELY 290 (365)
T ss_dssp HHCTTEEEEEESSSTTSCTT-TCCEEEEECHHHHHHHHHHSCTTC--SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeecchHhcCcc-hheEEEEcCHHHHHHHHHhcCCCC--cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 2367799999999997555 347888889999998887665544 4444444443333 34556666777888888
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccc
Q 009167 421 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 500 (541)
Q Consensus 421 a~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~ 500 (541)
.+.|+++ .+. + +|. .|+++++.+++. ....+.+.|...++.++.|..+
T Consensus 291 ~~~l~~~-g~~-~-~~~----------------~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~----------- 338 (365)
T 3get_A 291 KEFAKKH-NIK-I-IDS----------------YTNFITYFFDEK--NSTDLSEKLLKKGIIIRNLKSY----------- 338 (365)
T ss_dssp HHHHHHT-TCE-E-CCC----------------SSSEEEEECSSS--CHHHHHHHHHTTTEECEECGGG-----------
T ss_pred HHHHHhC-CCE-E-CCC----------------CCeEEEEECCCC--CHHHHHHHHHHCCEEEEECccC-----------
Confidence 8999887 443 2 221 467889999753 4556777777678887776432
Q ss_pred cCCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 009167 501 WDLSQSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQAL 538 (541)
Q Consensus 501 ~~~~~~~~~~~gi~~~~IRlSvG~-e~~edli~dL~~AL 538 (541)
+ ++.||||++. ++.+.+++.|.++|
T Consensus 339 -----------~--~~~iRis~~~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 339 -----------G--LNAIRITIGTSYENEKFFTEFDKIL 364 (365)
T ss_dssp -----------T--CSEEEEECCCHHHHHHHHHHHHHHH
T ss_pred -----------C--CCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 2 5789999994 23444555555544
No 30
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.96 E-value=1.7e-27 Score=244.57 Aligned_cols=283 Identities=18% Similarity=0.180 Sum_probs=198.3
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----C
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----~ 283 (541)
.++...+||++||+++|.++.++++||++|+.+++.+++++||+|++++++|.+++... ......|+++.+++. .
T Consensus 36 ~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 114 (347)
T 1jg8_A 36 EDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVG-AMAVLSGVMPHPVPGKNGAM 114 (347)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTT-HHHHHTCCEEEEECEETTEE
T ss_pred CChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhcccc-chhhccCeEEEEecCCCCcc
Confidence 57889999999999999988999999999999999999999999999999997654211 122335777776621 2
Q ss_pred CHHHHHHhccC-----CCceEEEEeCCCCCC-CccccH---HHHHHHHHhCCCEEEEeCCCCC------CCcccccccCC
Q 009167 284 DMEGLEAALNN-----NNVSLFFTESPTNPF-LRCVDV---KLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGA 348 (541)
Q Consensus 284 d~e~Le~al~~-----~~tklV~lesP~NPt-G~i~dl---~~Ia~la~~~gi~lIvDea~a~------~~~~~~~~~ga 348 (541)
|+++|++++++ .++++|++++|+||| |.++|. ++|.++|+++|++||+|+++.. +.....+..++
T Consensus 115 d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 194 (347)
T 1jg8_A 115 DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYA 194 (347)
T ss_dssp CHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTC
T ss_pred CHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccc
Confidence 89999999975 159999999999999 999875 6888999999999999998632 12222233468
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc--hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEA 426 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~--s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~ 426 (541)
|.++.|+||+++++ +||+++++++++++++.....++... ....++++..+++....++++..++++.+.+.|++
T Consensus 195 d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~ 271 (347)
T 1jg8_A 195 DSVMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKE 271 (347)
T ss_dssp SEEEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHH
T ss_pred cEEEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88889999999865 36678889888888876655555433 34445555556655444555556677888888877
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHH
Q 009167 427 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQS 506 (541)
Q Consensus 427 ~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~ 506 (541)
+ .+. +..+ ...++++++.++.......+|.+.|...++.++.+
T Consensus 272 ~-~~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~-------------------- 314 (347)
T 1jg8_A 272 I-GYS-VNPE---------------DVKTNMVILRTDNLKVNAHGFIEALRNSGVLANAV-------------------- 314 (347)
T ss_dssp H-TCB-CCGG---------------GCCSSEEEEECTTSSSCHHHHHHHHHHHTEECEEE--------------------
T ss_pred c-Cce-eccC---------------CCcceEEEEEcccccCCHHHHHHHHHHCCCEEecC--------------------
Confidence 5 332 1111 01467899998731123456677766556665432
Q ss_pred HHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 507 ERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 507 ~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
.++.|||+++...+++.++.+.++|
T Consensus 315 -------~~~~iRl~~~~~~~~e~i~~~~~~l 339 (347)
T 1jg8_A 315 -------SDTEIRLVTHKDVSRNDIEEALNIF 339 (347)
T ss_dssp -------ETTEEEEECCTTSCHHHHHHHHHHH
T ss_pred -------CCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 1357999997654444444444443
No 31
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.96 E-value=6.1e-27 Score=244.57 Aligned_cols=295 Identities=16% Similarity=0.177 Sum_probs=208.3
Q ss_pred CchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 208 GNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~al----l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
..+...+++++||+++|. +.++++++|++|+.+++.++ +++||+|+++.++|++....+....+..|.++..+
T Consensus 65 ~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~ 144 (406)
T 1kmj_A 65 ATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVI 144 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEE
Confidence 456788999999999998 45777778889999999999 89999999999999987655555556668888888
Q ss_pred CCC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcEEEEC
Q 009167 281 DPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (541)
Q Consensus 281 d~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDivv~S 354 (541)
+.+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+....++|+++.|
T Consensus 145 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s 223 (406)
T 1kmj_A 145 PLNPDGTLQLETLPTLFDE-KTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFS 223 (406)
T ss_dssp CBCTTSCBCGGGHHHHCCT-TEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEE
T ss_pred ecCCCCCcCHHHHHHHhcc-CCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEE
Confidence 753 78999999987 599999999999999999999999999999999999999876532 23334579999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhh---------------------hcCCCchHHHHHHHH-HhHHHH-----H
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLII-RGMKTL-----H 407 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~s~~~a~l~l-~~l~tl-----~ 407 (541)
+||.+|+.| .|++++++++++.++.... .+....++..+.+++ ..++.+ .
T Consensus 224 ~~K~~g~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 300 (406)
T 1kmj_A 224 GHKLYGPTG---IGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLN 300 (406)
T ss_dssp GGGTTSCTT---CEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHH
T ss_pred chhccCCCC---cEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHH
Confidence 999997665 5899999988887654321 011111222222222 233332 2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCC
Q 009167 408 LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGG 487 (541)
Q Consensus 408 ~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~ 487 (541)
...++..++++.+.+.|++.|++. +..|. +.|+++.|.+++. ....+.+.|...++.+..|.
T Consensus 301 ~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~ 362 (406)
T 1kmj_A 301 NIAEYEQNLMHYALSQLESVPDLT-LYGPQ---------------NRLGVIAFNLGKH--HAYDVGSFLDNYGIAVRTGH 362 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTEE-EESCT---------------TCCSEEEEEETTC--CHHHHHHHHHHTTEECEEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeE-EecCC---------------CcCCEEEEEECCC--CHHHHHHHHhhCCcEEEecc
Confidence 334455577788888888776653 22221 1367888888641 23455566666677777665
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 488 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 488 ~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
.++. + ....+|. ++.||||++..++++.++.+.++|+
T Consensus 363 ~~~~---~-----------~~~~~g~-~~~iRis~~~~~t~~~i~~~~~~l~ 399 (406)
T 1kmj_A 363 HCAM---P-----------LMAYYNV-PAMCRASLAMYNTHEEVDRLVTGLQ 399 (406)
T ss_dssp TTCH---H-----------HHHHTTC-SCEEEEECCTTCCHHHHHHHHHHHH
T ss_pred ccch---H-----------HHHhcCC-CCeEEEEeecCCCHHHHHHHHHHHH
Confidence 4321 0 1112232 5799999998755555555555554
No 32
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.96 E-value=6.3e-27 Score=246.88 Aligned_cols=305 Identities=18% Similarity=0.207 Sum_probs=210.3
Q ss_pred ccCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhcc----CCCEEEEcCCCCcchHHHHHhhcccCCeE
Q 009167 203 EYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP----AGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~----pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
.+++...+..+++++.|++++|.+ .++++++|++|+.+++.++.+ +||+|+++.++|+++...+.. +...|++
T Consensus 61 ~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~~~~g~~ 139 (423)
T 3lvm_A 61 RFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQ-LEREGFE 139 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHH-HHHTTCE
T ss_pred chhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHH-HHHcCCE
Confidence 334444567789999999999986 788888899999999998874 799999999999987665533 3566888
Q ss_pred EEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcE
Q 009167 277 ATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADL 350 (541)
Q Consensus 277 v~~vd~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDi 350 (541)
+..++.+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|++||+|++++.+.. ......++|+
T Consensus 140 ~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di 218 (423)
T 3lvm_A 140 VTYLAPQRNGIIDLKELEAAMRD-DTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDL 218 (423)
T ss_dssp EEEECCCTTSCCCHHHHHHHCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSE
T ss_pred EEEeccCCCCccCHHHHHHhcCC-CcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCE
Confidence 8888764 89999999987 499999999999999999999999999999999999999876543 4445568999
Q ss_pred EEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-------hcCCCchHHHHHHHHHhHHH----HHHHHHHHHHHHHH
Q 009167 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALR 419 (541)
Q Consensus 351 vv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-------~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~a~~ 419 (541)
++.|+||.+|+.+ .|+++++++..+.+..... ...++.+......+...++. +....++..++++.
T Consensus 219 ~~~s~sK~~g~~g---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 295 (423)
T 3lvm_A 219 MSFSGHKIYGPKG---IGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNR 295 (423)
T ss_dssp EEEESTTTTSCSS---CEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEechHHhcCCCC---eEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888765 5788887765554433211 11223333333322223332 34445566677788
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcccc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
+.+.|++.|.+..+..+. ...++++.|.+++. ....+.+.|.. +.++.|..++....
T Consensus 296 l~~~L~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~l~~~l~~--i~v~~g~~~~~~~~----- 352 (423)
T 3lvm_A 296 LWNGIKDIEEVYLNGDLE--------------HGAPNILNVSFNYV--EGESLIMALKD--LAVSSGSACTSASL----- 352 (423)
T ss_dssp HHHHHTTSTTEEEESCST--------------TBCTTEEEEEETTS--CHHHHHHHTTT--EECBCCCC-----C-----
T ss_pred HHHHHhcCCCEEEeCCcc--------------ccCCCeEEEEeCCC--CHHHHHHHHhh--heeccCccccCCCc-----
Confidence 888887777664332211 11356888888642 34566777765 77777765432110
Q ss_pred ccCCCHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHH
Q 009167 500 YWDLSQSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~----~~~IRlSvG~e~~edli~dL~~AL 538 (541)
.+......+|+. ++.|||+++...+++.++.+.++|
T Consensus 353 ---~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l 392 (423)
T 3lvm_A 353 ---EPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELV 392 (423)
T ss_dssp ---CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHH
T ss_pred ---cccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHH
Confidence 011223334554 479999999655544444444444
No 33
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.95 E-value=5.4e-27 Score=243.70 Aligned_cols=285 Identities=13% Similarity=0.155 Sum_probs=204.5
Q ss_pred chhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC--
Q 009167 209 NPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-- 283 (541)
.+...+||++||++++. ++++++++|++|+.+++.+++++||+|+++.++|+++... +...|.++..++.+
T Consensus 62 ~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~ 137 (375)
T 3op7_A 62 IEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDI----PKSLGAEVDLWQIEEE 137 (375)
T ss_dssp TTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHH----HHHTTCEEEEEEEEGG
T ss_pred CCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEEecccc
Confidence 45567999999998742 5788888888999999999999999999999999986644 34457777766532
Q ss_pred -----CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc---c-ccccCCcEE
Q 009167 284 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---K-ALSLGADLV 351 (541)
Q Consensus 284 -----d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~---~-~~~~gaDiv 351 (541)
|+++|++++++ ++++|++++|+||||.++| +++|.++|++||+++|+|++|+..... . ....+.+++
T Consensus 138 ~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~ 216 (375)
T 3op7_A 138 NGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIA 216 (375)
T ss_dssp GTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEE
T ss_pred CCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEE
Confidence 89999999987 5999999999999999999 999999999999999999998764321 1 112456799
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHH----HHHHHHHHHHHHHHHHHhC
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL----RVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~----r~~~~~~~a~~la~~L~~~ 427 (541)
+.|+||.++.+| ..+|++++++++++.++......+...++..++++...++.... +.++..++++.+.+.|+++
T Consensus 217 ~~s~sK~~~~~G-~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 295 (375)
T 3op7_A 217 VNSLSKTYSLPG-IRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEE 295 (375)
T ss_dssp EEESSSSSSCGG-GCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EeEChhhcCCcc-cceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999998555 45789999999999988766655555566665555555544332 2333456778888888887
Q ss_pred CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCcccccccCccccccCCCHH
Q 009167 428 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQS 506 (541)
Q Consensus 428 p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~~~~~~~~~ 506 (541)
+.+..+ .|. .|.++++.++.+ .....+...+ +..++.+..|..+.
T Consensus 296 ~~~~~~-~~~----------------~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~---------------- 341 (375)
T 3op7_A 296 PLVSYI-RPA----------------VVSTSFVKIAVD-MPMEDFCLQLLQEHGVLLVPGNRFE---------------- 341 (375)
T ss_dssp TTEEEC-CCS----------------SSSCEEEEECCS-SCHHHHHHHHHHHHCEECEEGGGGT----------------
T ss_pred CCceEe-cCC----------------CeEEEeEEcCCC-CCHHHHHHHHHHhCCEEEeChhhhC----------------
Confidence 766432 221 234556666532 1234455554 45577766654321
Q ss_pred HHHhcCCCCCeEEEEecCCC--HHHHHHHHHHHHhh
Q 009167 507 ERLKYGIMDNLVRFSFGVED--FEDLKADVLQALHA 540 (541)
Q Consensus 507 ~~~~~gi~~~~IRlSvG~e~--~edli~dL~~AL~~ 540 (541)
.++.+||+++..+ .++.++.|.+++++
T Consensus 342 -------~~~~iRi~~~~~~~~i~~~l~~l~~~l~~ 370 (375)
T 3op7_A 342 -------RDGYVRLGFACEQETLIKGLEKLSQFLRR 370 (375)
T ss_dssp -------CTTEEEECCCSCHHHHHHHHHHHHHHHGG
T ss_pred -------CCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 1478999998753 44556666666653
No 34
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.95 E-value=6.9e-27 Score=240.77 Aligned_cols=283 Identities=15% Similarity=0.179 Sum_probs=207.6
Q ss_pred cCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
..+|+++...+++++||+++|. ++++++++|++|+.+++.+++++||+|+++.++|++.... ++..|.++.+++
T Consensus 45 ~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~ 120 (354)
T 3ly1_A 45 ANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHF----AKIAGMKVTKVK 120 (354)
T ss_dssp TTSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEEC
T ss_pred CcCCCCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhCCCCeEEECCCCchHHHHH----HHHcCCEEEEec
Confidence 4556788899999999999996 4677777778999999999999999999999999986543 445688988888
Q ss_pred CC-----CHHHHHHhccC-CCceEEEEeCCCCCCCccccHHHHHHHHHh--CCCEEEEeCCCCCCCcc----ccc----c
Q 009167 282 PA-----DMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----S 345 (541)
Q Consensus 282 ~~-----d~e~Le~al~~-~~tklV~lesP~NPtG~i~dl~~Ia~la~~--~gi~lIvDea~a~~~~~----~~~----~ 345 (541)
.+ |+++|++++++ .++++|++++|+||||.++|++++.++++. +|+++|+|++|+..... ... .
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 200 (354)
T 3ly1_A 121 MLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQ 200 (354)
T ss_dssp CCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHT
T ss_pred CCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhh
Confidence 66 89999999982 259999999999999999998888888777 99999999998753221 111 2
Q ss_pred c-CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHHHHHHHHHHHHHHH
Q 009167 346 L-GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMA 421 (541)
Q Consensus 346 ~-gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~r~~~~~~~a~~la 421 (541)
. +.++++.|+||.+|.+| ...|++++++++++.++.....+ ..++...+.+...+ +.+..+.++..++++.+.
T Consensus 201 ~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~ 277 (354)
T 3ly1_A 201 GAENIILLKTFSKIHAMAG-MRVGYAVAHPTVIALMGRYVAGE--KINFSGVDAALASMNDSAFITYSKKSNDVSRQILL 277 (354)
T ss_dssp TCSSEEEEEESSSTTCCGG-GCCEEEECCHHHHHHHGGGTTCS--CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeeChhhccChh-hhheeeecCHHHHHHHHHhcCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 2 56799999999997444 45789999999998887765543 34555444444443 335556666777888888
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcccccc
Q 009167 422 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW 501 (541)
Q Consensus 422 ~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~ 501 (541)
+.|+++ .+. + +| +.|+++++.++++ ...+.+.|...++.++ |..+
T Consensus 278 ~~l~~~-~~~-~-~~----------------~~~~~~~~~~~~~---~~~~~~~l~~~gi~v~-g~~~------------ 322 (354)
T 3ly1_A 278 KALEDL-KLP-Y-LP----------------SEGNFVFHQLVVP---LKDYQTHMADAGVLIG-RAFP------------ 322 (354)
T ss_dssp HHHHHH-TCC-B-CC----------------CCSSEEEEECSSC---HHHHHHHHHHTTEECC-CCCT------------
T ss_pred HHHHHC-CCe-E-CC----------------CCceEEEEECCCC---HHHHHHHHHHCCEEEe-ecCC------------
Confidence 888775 221 1 12 1467889999753 3455666655677777 5431
Q ss_pred CCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009167 502 DLSQSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALH 539 (541)
Q Consensus 502 ~~~~~~~~~~gi~~~~IRlSvG~e-~~edli~dL~~AL~ 539 (541)
+ .++.||||++.+ +.+.+++.|.++++
T Consensus 323 ----------~-~~~~iRis~~~~~~i~~~~~~l~~~l~ 350 (354)
T 3ly1_A 323 ----------P-ADNWCRISLGTPQEMQWVADTMREFRK 350 (354)
T ss_dssp ----------T-CTTEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred ----------C-CCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 0 257899999842 44556666666654
No 35
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.95 E-value=2.2e-26 Score=244.56 Aligned_cols=286 Identities=15% Similarity=0.134 Sum_probs=213.5
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHH
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~ 287 (541)
..+...+|+++|++++|.++.++++||++|+..++.+++++||.|+++.+.|+++...+ +..|.++..++..|+++
T Consensus 107 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~ 182 (427)
T 2w8t_A 107 TFHDHMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGC----QQGNAEIVRFRHNSVED 182 (427)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHH----HHSCSEEEEECTTCHHH
T ss_pred CcHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHH----HHcCCeeEEeCCCCHHH
Confidence 35778999999999999999999999999999999999999999999999999866443 34578888888899999
Q ss_pred HHHhccCC---CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccc---------ccccCCcEEEECC
Q 009167 288 LEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHSA 355 (541)
Q Consensus 288 Le~al~~~---~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~---------~~~~gaDivv~S~ 355 (541)
|++++++. ++++|++++++||+|.+.|+++|.++|++||++||+||+|+.+.... ....++|+++.|+
T Consensus 183 le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~ 262 (427)
T 2w8t_A 183 LDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTF 262 (427)
T ss_dssp HHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEES
T ss_pred HHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecc
Confidence 99998752 48999999999999999999999999999999999999987653321 1123579999999
Q ss_pred ccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCCchHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCCc
Q 009167 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKV 430 (541)
Q Consensus 356 sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~s~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~v 430 (541)
+|++|.. ||++++++++++.++... ..++...++..+..+...++.+ ..+.++..++.+++.+.|++. ++
T Consensus 263 sK~~g~~----gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 337 (427)
T 2w8t_A 263 SKSVGTV----GGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM-GF 337 (427)
T ss_dssp SSTTCSC----CEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred hhhhccC----CCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 9999844 599999988887776532 2334556666655555566554 455667778888888888775 33
Q ss_pred eEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHh
Q 009167 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 510 (541)
Q Consensus 431 ~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~ 510 (541)
. +..+. +.|++++|.+++ .....++.+.|...++.+..|..+.. +
T Consensus 338 ~-~~~~~---------------~~~~~~~~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~~~~------------~------ 382 (427)
T 2w8t_A 338 R-LGTET---------------CDSAIVAVMLED-QEQAAMMWQALLDGGLYVNMARPPAT------------P------ 382 (427)
T ss_dssp E-ESCSS---------------CCSSEEEEEESS-HHHHHHHHHHHHHTTEECEEECTTTS------------C------
T ss_pred c-ccCCC---------------CCCCEEEEEECC-HHHHHHHHHHHHHCCeEEeeeCCCCC------------C------
Confidence 2 21111 146799999964 34566777777666777766543211 0
Q ss_pred cCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 511 YGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 511 ~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
...+.|||+++..++++.++.+.++|+
T Consensus 383 --~~~~~lRi~~~~~~t~e~i~~~~~~l~ 409 (427)
T 2w8t_A 383 --AGTFLLRCSICAEHTPAQIQTVLGMFQ 409 (427)
T ss_dssp --TTCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred --CCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 124689999998655555555554443
No 36
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.95 E-value=2.9e-26 Score=237.72 Aligned_cols=280 Identities=15% Similarity=0.196 Sum_probs=201.3
Q ss_pred CCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 205 GRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
.+|+++...+|+++||+++|.+ +++++++|++++.+++.+++++| |+|+++.|+|++....+ +..|.++..++
T Consensus 53 ~~Y~~~~~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~----~~~g~~~~~v~ 128 (356)
T 1fg7_A 53 NRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSA----ETIGVECRTVP 128 (356)
T ss_dssp TSCCCSSCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHH----HHHTCEEEECC
T ss_pred ccCCCccHHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHH----HHcCCEEEEee
Confidence 4566666789999999999874 45555555699999999999999 99999999999866443 34577877776
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHH---HHHHHhCCCEEEEeCCCCCCCc-ccc----cccCC
Q 009167 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV---SDLCHKKGAIVCIDGTFATPLN-QKA----LSLGA 348 (541)
Q Consensus 282 ~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~I---a~la~~~gi~lIvDea~a~~~~-~~~----~~~ga 348 (541)
. .|+++++++++ ++++|++++|+||||.++|.++| +++|+ +|+++|+||+|..+.. ... ...+.
T Consensus 129 ~~~~~~~d~~~l~~~i~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~ 205 (356)
T 1fg7_A 129 TLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPH 205 (356)
T ss_dssp CCTTSCCCHHHHHTSCT--TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTT
T ss_pred CCCCCCCCHHHHHHHhc--CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCC
Confidence 4 37899999887 49999999999999999986655 55555 8999999999875431 111 12356
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t-----l~~r~~~~~~~a~~la~~ 423 (541)
++++.|+||++|.+| ...|++++++++++.++.....+ ..++..+..+...++. +..+.++..++++.+.+.
T Consensus 206 ~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 282 (356)
T 1fg7_A 206 LAILRTLSKAFALAG-LRCGFTLANEEVINLLMKVIAPY--PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAA 282 (356)
T ss_dssp EEEEEESSSTTCCGG-GCCEEEEECHHHHHHHHHHSCSS--CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecchHhhcCch-hhhEEEEeCHHHHHHHHHhcCCC--CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999998555 35789999999998888765544 3455555544444433 444555666778888889
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeeccc-CCcccccccCccccccC
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF-GGCESIVDQPAIMSYWD 502 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~-G~~~sl~~~pa~~~~~~ 502 (541)
|++++.+.. ..|. .|+++++.++ + ..++.+.|...++.+.. |..+
T Consensus 283 L~~~~~~~~-~~~~----------------~~~~~~~~~~-~---~~~l~~~L~~~gI~v~~~g~~~------------- 328 (356)
T 1fg7_A 283 LKEIPCVEQ-VFDS----------------ETNYILARFK-A---SSAVFKSLWDQGIILRDQNKQP------------- 328 (356)
T ss_dssp HHHSTTEEE-ECCC----------------SSSEEEEEET-T---HHHHHHHHHHTTEECEECTTST-------------
T ss_pred HHhCCCceE-ECCC----------------CCeEEEEECC-C---HHHHHHHHHHCCEEEEECCCCC-------------
Confidence 988765432 2332 4678899996 2 34566666666777765 5331
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 503 LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
|. ++.+|||++. ++.++.+.++|+++
T Consensus 329 ---------~~-~~~iRis~~~---~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 329 ---------SL-SGCLRITVGT---REESQRVIDALRAE 354 (356)
T ss_dssp ---------TC-TTEEEEECCC---HHHHHHHHHHHHTC
T ss_pred ---------CC-CCeEEEEeCC---HHHHHHHHHHHHhh
Confidence 11 4689999984 44567777777653
No 37
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.95 E-value=2.6e-26 Score=239.09 Aligned_cols=297 Identities=17% Similarity=0.132 Sum_probs=206.1
Q ss_pred CCccCCCCchhHHHHHHHHHHHhC----CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALEG----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g----~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
.+.|+....+..+++++.+++.+| .+.++++++|++|+.+++.+++++||+|+++.++|++.... +...|.+
T Consensus 57 ~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~ 132 (391)
T 3dzz_A 57 AFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSV----IEGNGRR 132 (391)
T ss_dssp CCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHH----HHHTTCE
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHH----HHHcCCE
Confidence 456666656667777778887777 24677777788999999999999999999999999986543 3446788
Q ss_pred EEEeCC--------CCHHHHHHhccCCCceEEEEeCCCCCCCcc---ccHHHHHHHHHhCCCEEEEeCCCCCCCc-----
Q 009167 277 ATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----- 340 (541)
Q Consensus 277 v~~vd~--------~d~e~Le~al~~~~tklV~lesP~NPtG~i---~dl~~Ia~la~~~gi~lIvDea~a~~~~----- 340 (541)
+..++. .|+++|++++++.++++|++++|+||||.+ .++++|+++|++||++||+|++|+....
T Consensus 133 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 212 (391)
T 3dzz_A 133 VISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDI 212 (391)
T ss_dssp EEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCC
T ss_pred EEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCc
Confidence 877765 589999999973359999999999999999 4588999999999999999999875321
Q ss_pred ccccccC---Cc--EEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcC-CCchHHHHHHHHHhHHH----HHHH
Q 009167 341 QKALSLG---AD--LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-GALNPNAAYLIIRGMKT----LHLR 409 (541)
Q Consensus 341 ~~~~~~g---aD--ivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G-~~~s~~~a~l~l~~l~t----l~~r 409 (541)
......+ .| +++.|+||.+|.+| ..+|+++++ +++++.++......+ ...++.....+...++. +..+
T Consensus 213 ~~~~~~~~~~~d~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 291 (391)
T 3dzz_A 213 TPAFTVDWDAKNWVVSLISPSKTFNLAA-LHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLREL 291 (391)
T ss_dssp CCGGGSCTTTGGGEEEEECSHHHHTCTT-TCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHH
T ss_pred eehhhcCccccCcEEEEEeChhhccccc-hhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHH
Confidence 1122222 45 99999999997554 357888886 888888876644322 23343333333333332 4555
Q ss_pred HHHHHHHHHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCC
Q 009167 410 VQQQNSTALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGG 487 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~-~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~ 487 (541)
.++..++++.+.+.|++ .|.+. +..|. .+.++++.++........+.+.| +..++.++.|.
T Consensus 292 ~~~~~~~~~~l~~~l~~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 354 (391)
T 3dzz_A 292 KQVLRDNFAYAREFLAKEVPEVK-VLDSN----------------ASYLAWVDISALGMNAEDFCKYLREKTGLIISAGN 354 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSE-ECCCC----------------BSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESG
T ss_pred HHHHHHHHHHHHHHHHhhCCCcE-EeccC----------------ceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCch
Confidence 66667788888899988 67664 22221 34466788763112345666666 35688888775
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009167 488 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 540 (541)
Q Consensus 488 ~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~~ 540 (541)
.+.. ..++.+|||++.. +.++.++.|.+++++
T Consensus 355 ~~~~---------------------~~~~~iRis~~~~~~~i~~~l~~l~~~l~~ 388 (391)
T 3dzz_A 355 GYRG---------------------NGHEFVRINLACPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp GGCT---------------------TGGGEEEEECCSCHHHHHHHHHHHHHHHHT
T ss_pred hhCC---------------------CCCCEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 4321 0247899999942 234445555565554
No 38
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.95 E-value=2.9e-27 Score=247.41 Aligned_cols=307 Identities=14% Similarity=0.139 Sum_probs=203.0
Q ss_pred CCccCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc----cCCC-EEEEcCCCCcchHHHHHhhcccC
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGG-HIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all----~pGd-~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
.|.|+++..+..+++++++|+++|.+ .++++++|++|+.+++.+++ ++|| +|+++.++|+++...+.. +...
T Consensus 54 ~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~-~~~~ 132 (400)
T 3vax_A 54 RHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEH-LAGR 132 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHH-HHTT
T ss_pred cchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHH-HHhc
Confidence 35566667788999999999999985 67778888899999999987 8999 999999999987766643 3567
Q ss_pred CeEEEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccC
Q 009167 274 GITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLG 347 (541)
Q Consensus 274 Gi~v~~vd~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~g 347 (541)
|+++..++.+ |+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|++||+|++++.+.. .+....
T Consensus 133 g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~- 210 (400)
T 3vax_A 133 GFEVDFLTPGPSGRISVEGVMERLRP-DTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP- 210 (400)
T ss_dssp TCEEEEECCCTTCCCCHHHHHTTCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC-
T ss_pred CCeEEEEccCCCCCcCHHHHHHhcCC-CceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc-
Confidence 8999988754 89999999987 499999999999999999999999999999999999999886543 222334
Q ss_pred CcEEEECCccccCCCCCceEEEEE-eCh-HHH---HHHHHHh-------hhcCCCchHHHHHHHHHhHHHH----HHHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSIS-GSG-KLV---TQIRNLH-------HVLGGALNPNAAYLIIRGMKTL----HLRVQ 411 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv-~~~-~li---~~l~~~~-------~~~G~~~s~~~a~l~l~~l~tl----~~r~~ 411 (541)
+|+++.|+||++|+.| .|+++ .++ ++. ..+.... ....++.+....+.+...++.+ ....+
T Consensus 211 ~d~~~~s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~ 287 (400)
T 3vax_A 211 IDMISISGHKIGAPKG---VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQV 287 (400)
T ss_dssp CSEEEEETGGGTSCSS---CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CcEEEEeHHHhCCCCc---eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHH
Confidence 8999999999777554 45555 544 111 1111111 1112333444443333344433 33445
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccc
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
+..++++++.+.|+ .+.+. +..|.- ...+++++|.+++ .....+.+.|. .++.++.|..++.
T Consensus 288 ~~~~~~~~l~~~L~-~~~~~-~~~~~~-------------~~~~~~~~~~~~~--~~~~~l~~~L~-~gi~v~~g~~~~~ 349 (400)
T 3vax_A 288 AAQDLRSRLLAGLA-STSFQ-VNGDQD-------------HVVPHILNLSFED--VDAEAFLVTLK-DLVAVATGSASTS 349 (400)
T ss_dssp HHHHHHHHHHHHHT-TTTCE-ECSCTT-------------SBCTTEEEEECTT--CCHHHHHHHHH-HHHHHTTTTEEEE
T ss_pred HHHHHHHHHHHhhC-CCCEE-EeCCcc-------------cCCCCEEEEEeCC--CCHHHHHHHHh-cCcEEEecccccC
Confidence 55566777777776 55553 222210 1246788998875 23456777777 8899998876543
Q ss_pred cccCccccccCCCHHHHHhcCCC----CCeEEEEe-cCCCHHHHHHHHHHHHh
Q 009167 492 VDQPAIMSYWDLSQSERLKYGIM----DNLVRFSF-GVEDFEDLKADVLQALH 539 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~----~~~IRlSv-G~e~~edli~dL~~AL~ 539 (541)
.... +......+|+. ++.||||+ |...+++.++.+.++|+
T Consensus 350 ~~~~--------~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~ 394 (400)
T 3vax_A 350 ASFT--------PSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVA 394 (400)
T ss_dssp EEEC--------CHHHHHTTTCCHHHHTSEEEEEEEEC---------------
T ss_pred CCCC--------ccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHH
Confidence 2111 11223344554 48999999 86555444454444443
No 39
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.95 E-value=7.6e-26 Score=237.16 Aligned_cols=284 Identities=14% Similarity=0.148 Sum_probs=208.2
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHH
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~ 287 (541)
..+..+++++.+++++|.++++++++|++|+.+++.+++++||+|+++.++|+++... +...|.++..++..|+++
T Consensus 86 ~~~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~----~~~~g~~~~~v~~~d~~~ 161 (398)
T 3a2b_A 86 TLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDG----SRLSFSKVIKYGHNNMED 161 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHH----HHHSSSEEEEECTTCHHH
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHH----HHHcCCceEEeCCCCHHH
Confidence 4577899999999999998899999999999999999999999999999999987643 344688898999889999
Q ss_pred HHHhccCC---CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc----ccccc-c----CCcEEEECC
Q 009167 288 LEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----QKALS-L----GADLVLHSA 355 (541)
Q Consensus 288 Le~al~~~---~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~----~~~~~-~----gaDivv~S~ 355 (541)
|++++++. ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. ..... . ++|+++.|+
T Consensus 162 l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~ 241 (398)
T 3a2b_A 162 LRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTF 241 (398)
T ss_dssp HHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEES
T ss_pred HHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecc
Confidence 99998762 489999999999999999999999999999999999999976532 11111 1 269999999
Q ss_pred ccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCCchHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCCc
Q 009167 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKV 430 (541)
Q Consensus 356 sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~s~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~v 430 (541)
||++++.| |++++++++++.++... .......++.....+...++.+ ..+.++..++++.+.+.|++. ++
T Consensus 242 sK~~~~~G----G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 316 (398)
T 3a2b_A 242 SKSLASLG----GFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH-GF 316 (398)
T ss_dssp SSTTCSSC----EEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred cccccCCC----cEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 99998654 89999999988887642 2223334444433333344333 344556667788888888775 22
Q ss_pred eEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHh
Q 009167 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 510 (541)
Q Consensus 431 ~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~ 510 (541)
. + ++ +.|+++++.++. ......+.+.|...++.+..|..+.. +
T Consensus 317 ~-~-~~----------------~~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~---~--------------- 359 (398)
T 3a2b_A 317 D-L-GA----------------TESPILPIFIRS-NEKTFWVTKMLQDDGVFVNPVVSPAV---P--------------- 359 (398)
T ss_dssp C-B-CS----------------CCSSEEEEECCC-HHHHHHHHHHHHHTTEECEEECTTTS---C---------------
T ss_pred C-c-CC----------------CCCCEEEEEcCC-HHHHHHHHHHHHHCCcEEEeeCCCCC---C---------------
Confidence 1 1 11 136789999864 24566777777666887776654321 0
Q ss_pred cCCCCCeEEEEecCCCH----HHHHHHHHHHHh
Q 009167 511 YGIMDNLVRFSFGVEDF----EDLKADVLQALH 539 (541)
Q Consensus 511 ~gi~~~~IRlSvG~e~~----edli~dL~~AL~ 539 (541)
..++.+||+++...+ +.+++.|.++++
T Consensus 360 --~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 390 (398)
T 3a2b_A 360 --AEESLIRFSLMATHTYDQIDEAIEKMVKVFK 390 (398)
T ss_dssp --GGGCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred --CCCceEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 024789999997433 444455555544
No 40
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.95 E-value=9.6e-27 Score=248.66 Aligned_cols=258 Identities=19% Similarity=0.237 Sum_probs=207.8
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcC-CCCcchHHHHH------hhcccCCeE
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIE------TVLPKMGIT 276 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~---~sSGs~Ai~~al~all~pGd~Vlv~~-~~y~~~~~~~~------~~l~~~Gi~ 276 (541)
|+++..+++++.+++++|.+..++ ++||++|+.+++.+++++||+|+++. +.|+.+...+. ..++..|++
T Consensus 62 y~~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~ 141 (431)
T 3ht4_A 62 YDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIG 141 (431)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCE
T ss_pred CChhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCE
Confidence 445678999999999999987766 88999999999999999999999998 99998765542 345668999
Q ss_pred EEEeCC-----CCHHHHHHhccCCCceEEEEeC-CCCCC---CccccHHHHHHHHHh--CCCEEEEeCCCCCCC-ccccc
Q 009167 277 ATVIDP-----ADMEGLEAALNNNNVSLFFTES-PTNPF---LRCVDVKLVSDLCHK--KGAIVCIDGTFATPL-NQKAL 344 (541)
Q Consensus 277 v~~vd~-----~d~e~Le~al~~~~tklV~les-P~NPt---G~i~dl~~Ia~la~~--~gi~lIvDea~a~~~-~~~~~ 344 (541)
+++++. .|+++|++++++ ++++|++++ |+||+ |.+.++++|+++|++ +|+++|+|++|+.+. ..++.
T Consensus 142 ~~~v~~~~~~~~d~e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~ 220 (431)
T 3ht4_A 142 YNAVPLTEGGLVDFEAVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC 220 (431)
T ss_dssp EEECCBCTTSSBCHHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG
T ss_pred EEEeCCCCCCCcCHHHHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc
Confidence 999987 389999999987 599999995 55555 555678899999999 999999999998876 36777
Q ss_pred ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCchH--HHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009167 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNP--NAAYLIIRGMKTLHLRVQQQNSTALRM 420 (541)
Q Consensus 345 ~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~s~--~~a~l~l~~l~tl~~r~~~~~~~a~~l 420 (541)
..|+|+++.|++|+++|+.+..||++++++++++.++..... .|...++ ..+++++++++++..++++..+++..+
T Consensus 221 ~~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~l 300 (431)
T 3ht4_A 221 HVGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFT 300 (431)
T ss_dssp GTTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHhhhHHHHHHHHHHHHHHH
Confidence 889999999999999987666789999999999988764432 2322222 224567788999999999999999999
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcC
Q 009167 421 AKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 480 (541)
Q Consensus 421 a~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~ 480 (541)
+++|++++. .+ +|. ++++. .+.+++|.++ +.+.+.+|++.|+.+.
T Consensus 301 ~~~L~~~g~--~v-~p~-~~~~~----------~~li~~i~l~-~~~~~~~~~~~l~~~~ 345 (431)
T 3ht4_A 301 AAFLEKLGM--NT-SPA-WNAPR----------TDLIQSVQFD-DKDRMIAFCQAIQYAS 345 (431)
T ss_dssp HHHHHHHTC--CE-ESC-TTSCC----------SSSCCEEECC-CHHHHHHHHHHHHHTS
T ss_pred HHHHHhCcC--Ee-cCC-CCCCC----------ccEEEEEEeC-CHHHHHHHHHHHHhcC
Confidence 999998764 34 565 44443 3458899996 5678889999987654
No 41
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.95 E-value=4.7e-27 Score=243.06 Aligned_cols=293 Identities=14% Similarity=0.162 Sum_probs=202.9
Q ss_pred CccCCCCchhHHHHHHH-HHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 202 FEYGRYGNPTTVVVEEK-MSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~-LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+.++++..+...+++++ +++++|.+..+++++|++|+.+++.+++++||+|+++.++|+++... +...|+++..+
T Consensus 45 ~~~~~~~~~~~~~l~~~~la~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v 120 (371)
T 2e7j_A 45 GRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVA----AERAGLNIALV 120 (371)
T ss_dssp --------CCHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH----HHHTTCEEEEE
T ss_pred ccchhhHHHHHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHH----HHHcCCeEEEe
Confidence 34556678889999999 99999988444444557999999999999999999999999987644 44568888888
Q ss_pred C--CC-----CHHHHHHhcc-----CCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccC
Q 009167 281 D--PA-----DMEGLEAALN-----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLG 347 (541)
Q Consensus 281 d--~~-----d~e~Le~al~-----~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~g 347 (541)
+ .+ |+++|+++++ + ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. .+....+
T Consensus 121 ~~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~ 199 (371)
T 2e7j_A 121 PKTDYPDYAITPENFAQTIEETKKRG-EVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIG 199 (371)
T ss_dssp CCCCTTTCCCCHHHHHHHHHHHTTTS-CEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHT
T ss_pred ecccCCCCCcCHHHHHHHHHhhcccC-CeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcC
Confidence 8 54 7999999997 5 599999999999999999999999999999999999999887543 3444567
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHH-HHHHhh--hc-----CCCchHHHHHHHHHhHHHHH-HHHHHH--HHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ-IRNLHH--VL-----GGALNPNAAYLIIRGMKTLH-LRVQQQ--NST 416 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~-l~~~~~--~~-----G~~~s~~~a~l~l~~l~tl~-~r~~~~--~~~ 416 (541)
+|+++.|+||+++++. .+|++++++++++. ++.... .. .++.++...+.+...++.+. ...++. .++
T Consensus 200 ~di~~~s~sK~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 277 (371)
T 2e7j_A 200 ADFIVGSGHKSMAASG--PIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEK 277 (371)
T ss_dssp CSEEEEEHHHHSSCCS--SCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHH
T ss_pred CCEEEecCCcCCCCCC--CcEEEEEechhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999888765 46999998887776 654332 11 23334444433334444443 234455 677
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCc
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa 496 (541)
++++.+.|++. .+. +..|. .+.+++++|.++ ...++.+.|...++.+.. ..+.
T Consensus 278 ~~~l~~~L~~~-~~~-~~~~~--------------~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~-~~~~------ 330 (371)
T 2e7j_A 278 ARRFAAEMEKL-GIK-QLGDN--------------PHNHDLMFFHAE----VLYEISKKAKGGRFFLYR-ELKS------ 330 (371)
T ss_dssp HHHHHHHHHHT-TCE-EESSS--------------SCCSSEEEEECH----HHHHHHHHSSSGGGHHHH-HHHH------
T ss_pred HHHHHHHHHHc-CcE-EecCC--------------CccCceEEEECC----CHHHHHHHHHHCCEEEEe-cccc------
Confidence 88888888876 443 22221 013668999885 456778888766654432 1000
Q ss_pred cccccCCCHHHHHhcCCCCCeEE-EEecCC-CHHHHHHHHHHHHh
Q 009167 497 IMSYWDLSQSERLKYGIMDNLVR-FSFGVE-DFEDLKADVLQALH 539 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IR-lSvG~e-~~edli~dL~~AL~ 539 (541)
.. ..|..++.|| |+++.. .+++.++.+.++|+
T Consensus 331 ------~~-----~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~ 364 (371)
T 2e7j_A 331 ------RK-----IHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFK 364 (371)
T ss_dssp ------TT-----EECSCTTCCSEEEEECTTCCHHHHHHHHHHHH
T ss_pred ------cc-----ccCCCCCceEEEEeeccCCCHHHHHHHHHHHH
Confidence 00 0133467899 999975 44444455544443
No 42
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.95 E-value=7.7e-26 Score=234.89 Aligned_cols=293 Identities=12% Similarity=0.057 Sum_probs=205.2
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC--c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e--~-~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
|+....+..+++++.+++++|.+ + ++++++|++|+.+++.+++++||+|+++.++|++.. +...+...|.++..+
T Consensus 47 ~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v 124 (386)
T 2dr1_A 47 RSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKR--YKEVVESNGRKAVVL 124 (386)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHH--HHHHHHHhCCceEEE
Confidence 43323577889999999999986 4 556677789999999999999999999999998731 223445568888877
Q ss_pred CC-----CCHHHHHHhccC-CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcEEEE
Q 009167 281 DP-----ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLH 353 (541)
Q Consensus 281 d~-----~d~e~Le~al~~-~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDivv~ 353 (541)
+. .|+++|++++++ .++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. ......++|+++.
T Consensus 125 ~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 204 (386)
T 2dr1_A 125 EYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFS 204 (386)
T ss_dssp ECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEE
T ss_pred ecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEE
Confidence 65 589999999942 2589999999999999999999999999999999999999876543 2333457899999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHH----------------HHh--hhcCCCchHHHHHHHHHhHHH------HHHH
Q 009167 354 SATKFIGGHNDVLAGSISGSGKLVTQIR----------------NLH--HVLGGALNPNAAYLIIRGMKT------LHLR 409 (541)
Q Consensus 354 S~sK~lgg~gd~~gG~lv~~~~li~~l~----------------~~~--~~~G~~~s~~~a~l~l~~l~t------l~~r 409 (541)
|+||+++++++ +|++++++++++.++ ... .....+.++...+.+...++. +...
T Consensus 205 s~sK~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~ 282 (386)
T 2dr1_A 205 SSQKAFGVPPG--LAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKW 282 (386)
T ss_dssp ETTSTTCCCSS--CEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred eccccccCCCc--eEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999987642 689999998887762 111 122234455444444444443 3345
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcc
Q 009167 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 489 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~ 489 (541)
.++..++++.+.+.|+++ .+. +..|. . ...+++++|.++.+ ....++.+.|...++.+..|..+
T Consensus 283 ~~~~~~~~~~l~~~L~~~-g~~-~~~~~-----~--------~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~~ 346 (386)
T 2dr1_A 283 LEMYEKRAKMVREGVREI-GLD-ILAEP-----G--------HESPTITAVLTPPG-IKGDEVYEAMRKRGFELAKGYGS 346 (386)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCC-BSSCT-----T--------CBCSSEEEEECCTT-CCHHHHHHHHHHTTEECEECCGG
T ss_pred HHHHHHHHHHHHHHHHHc-CCe-eCcCc-----c--------ccCCceEEEEcCCC-CCHHHHHHHHHHCCeEEecCccc
Confidence 566667888888888876 332 11110 0 01467899998732 23456666666557777665421
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH----HHHHHHHHHHHh
Q 009167 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF----EDLKADVLQALH 539 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~----edli~dL~~AL~ 539 (541)
..++.|||+++...+ +.+++.|.++++
T Consensus 347 -----------------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 377 (386)
T 2dr1_A 347 -----------------------VKEKTFRIGHMGYMKFEDIQEMLDNLREVIN 377 (386)
T ss_dssp -----------------------GTTTEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------cCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 025689999996433 344444444443
No 43
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.95 E-value=1.9e-26 Score=239.23 Aligned_cols=304 Identities=14% Similarity=0.127 Sum_probs=202.8
Q ss_pred CCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCCcchHHHHHhhcccCCeEEE
Q 009167 205 GRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all----~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~ 278 (541)
++...+..+++++++++++|.+ .++++++|++|+.+++.++. ++||+|+++.++|+++...+. .+...|+++.
T Consensus 38 ~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~ 116 (382)
T 4eb5_A 38 GFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFEVE 116 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHTTTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHH-HHHhCCcEEE
Confidence 3334567889999999999985 56677788899999999987 899999999999998766553 3455788888
Q ss_pred EeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcEEE
Q 009167 279 VIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVL 352 (541)
Q Consensus 279 ~vd~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDivv 352 (541)
+++. .|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|++ |+|++++.+.. .+....++|+++
T Consensus 117 ~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~ 194 (382)
T 4eb5_A 117 YIPVGKYGEVDVSFIDQKLRD-DTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLT 194 (382)
T ss_dssp EECBCTTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEE
T ss_pred EeccCCCCccCHHHHHHHhcC-CCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEE
Confidence 8875 389999999987 499999999999999999999999999999999 99999875322 222234789999
Q ss_pred ECCccccCCCCCceEEEEEeChHH-HHHHHH----HhhhcCCCchHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHH
Q 009167 353 HSATKFIGGHNDVLAGSISGSGKL-VTQIRN----LHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 353 ~S~sK~lgg~gd~~gG~lv~~~~l-i~~l~~----~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~a~~la~~ 423 (541)
.|+||++|+.| .|+++.+++. +..+.. ......++.+......+...++. +....++..++++.+.+.
T Consensus 195 ~s~sK~~g~~g---~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~ 271 (382)
T 4eb5_A 195 ISSNDIYGPKG---VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDN 271 (382)
T ss_dssp EETGGGTCCSS---CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eehHHhcCCCc---eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 99999977655 3666665542 111100 01111223333332222223332 344555666778888888
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCC
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 503 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~ 503 (541)
|++.|.+. +..|. . ...+++++|.+++. ...++.+.|...++.++.|..++...+ .
T Consensus 272 L~~~~~~~-~~~~~-----~--------~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~~~~~--------~ 327 (382)
T 4eb5_A 272 VLKIEESY-LNGHP-----E--------KRLPNNVNVRFSYI--EGESIVLSLDMAGIQASTGSACSSKTL--------Q 327 (382)
T ss_dssp HTTSTTEE-ECSCS-----S--------SBCTTEEEEEETTS--CHHHHHHHHHHHTCBCBCCCGGGTSSC--------C
T ss_pred HhhCCCeE-EeCCc-----c--------cCCCCEEEEEeCCc--CHHHHHHHHHHCCEEEeccccccCCCC--------c
Confidence 88776653 32221 0 01367899998742 244566666666888887765432110 0
Q ss_pred CHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHH
Q 009167 504 SQSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 504 ~~~~~~~~gi~----~~~IRlSvG~e~~edli~dL~~AL 538 (541)
+......+|.. ++.|||+++...+++.++.+.++|
T Consensus 328 ~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 366 (382)
T 4eb5_A 328 PSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVL 366 (382)
T ss_dssp CCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHH
T ss_pred ccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHH
Confidence 11223334543 579999999654444444444333
No 44
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=3.1e-26 Score=237.15 Aligned_cols=283 Identities=13% Similarity=0.150 Sum_probs=201.9
Q ss_pred cCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
+.+|+++...+|+++||+++|. ++++++++|++|+.+++.+++++||+|+++.++|.+.... ++..|.++..++
T Consensus 59 ~~~y~~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~v~ 134 (360)
T 3hdo_A 59 LRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTL----AEVQGARVRTFG 134 (360)
T ss_dssp GGSCCCSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHH----HHHHTCEEEEEC
T ss_pred hhcCCCCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHH----HHHCCCEEEEee
Confidence 4556667678999999999995 5788888889999999999999999999999999986643 345588888887
Q ss_pred CCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccc----cccCCcEEEECCcc
Q 009167 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----LSLGADLVLHSATK 357 (541)
Q Consensus 282 ~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~----~~~gaDivv~S~sK 357 (541)
.++...+++..+..++++|++++|+||||.++|+++|.++|+++|+++|+|++|+....... ...+.++++.|+||
T Consensus 135 ~~~~~~~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK 214 (360)
T 3hdo_A 135 LTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSK 214 (360)
T ss_dssp BCTTSSBTTCCSSBCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTT
T ss_pred CCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchH
Confidence 54322222222212367999999999999999999999999999999999999875321111 12456799999999
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCCCceEEe
Q 009167 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHPKVKRVH 434 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p~v~~v~ 434 (541)
.++.+| ...|++++++++++.++.....++ .++..++.+...++ .+..+.++..++++.+.+.|+++ .+. +
T Consensus 215 ~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~- 288 (360)
T 3hdo_A 215 SYSLAG-MRIGLAIARPEVIAALDKIRDHYN--LDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYD-V- 288 (360)
T ss_dssp TTSCTT-SCCEEEECCHHHHHHHHHHSCSCC--SCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-
T ss_pred hhcCCc-cceeeEeeCHHHHHHHHHhCCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-
Confidence 997555 357899999999998887654433 45555444444443 34556666777888888888876 442 2
Q ss_pred CCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCC
Q 009167 435 YPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM 514 (541)
Q Consensus 435 ~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~ 514 (541)
+|. .|+++++.+++. ....+.+.|...++.++.|+. + -.
T Consensus 289 ~~~----------------~~~~~~~~~~~~--~~~~l~~~l~~~gi~v~~~~~------~-----------------~~ 327 (360)
T 3hdo_A 289 IPS----------------QGNYLFATPPDR--DGKRVYDGLYARKVLVRHFSD------P-----------------LL 327 (360)
T ss_dssp CCC----------------SSSEEEEECTTC--CHHHHHHHHHHTTEECBCCCS------T-----------------TT
T ss_pred cCC----------------CccEEEEECCCC--CHHHHHHHHHHCCEEEEECCC------C-----------------CC
Confidence 221 467888888642 345566666666777766532 0 02
Q ss_pred CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 515 DNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 515 ~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
++.+|||++. ++.++.|.++|++
T Consensus 328 ~~~iRis~~~---~~e~~~l~~al~~ 350 (360)
T 3hdo_A 328 AHGMRISIGT---REEMEQTLAALKE 350 (360)
T ss_dssp TTSEEEECCC---HHHHHHHHHHHHH
T ss_pred CCEEEEEcCC---HHHHHHHHHHHHH
Confidence 4789999993 3445566666553
No 45
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.95 E-value=7.5e-26 Score=235.30 Aligned_cols=291 Identities=14% Similarity=0.094 Sum_probs=210.4
Q ss_pred CCCc--hhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 206 RYGN--PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 206 R~~~--p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+|+. +...+++++|++++|.+ +++++++|++|+.+++.++ +++||+|+++.++|++....+....+..|.++..+
T Consensus 53 ~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v 132 (390)
T 1elu_A 53 ANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFF 132 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEE
Confidence 4444 67889999999999975 6788888999999999999 89999999999999997655544445568888888
Q ss_pred CC-------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHH----hCCCEEEEeCCCCCCCc-ccccccCC
Q 009167 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH----KKGAIVCIDGTFATPLN-QKALSLGA 348 (541)
Q Consensus 281 d~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~----~~gi~lIvDea~a~~~~-~~~~~~ga 348 (541)
+. .|+++|++++++ ++++|++++|+||||.+.|+++|.++|+ ++|+++|+|++|+.+.. .+....++
T Consensus 133 ~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~ 211 (390)
T 1elu_A 133 PVAATLNQGDAAAVLANHLGP-KTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEV 211 (390)
T ss_dssp CCGGGSSSSCHHHHHHTTCCT-TEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCC
T ss_pred cCCCCCCccchHHHHHHhcCC-CceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCC
Confidence 75 268999999987 5999999999999999999999999999 99999999999875432 22224578
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh----------------------hhcCCCchHHHHH---HHHHhH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----------------------HVLGGALNPNAAY---LIIRGM 403 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~----------------------~~~G~~~s~~~a~---l~l~~l 403 (541)
|+++.|+||++.++.+ .|++++++++++.++... ....++.+..... .++..+
T Consensus 212 d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l 289 (390)
T 1elu_A 212 DYYAFTGHKWFAGPAG--VGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLH 289 (390)
T ss_dssp SEEEEESSSTTCCCTT--CEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHH
T ss_pred CEEEccccccccCCCc--eEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHH
Confidence 9999999995444432 588988888776654311 1112233333322 223333
Q ss_pred HH---HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcC
Q 009167 404 KT---LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 480 (541)
Q Consensus 404 ~t---l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~ 480 (541)
+. +....++..++++.+.+.|++.+++. +..|. .+.|+++.|.++.+ ....++.+.|...+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~l~~~g 353 (390)
T 1elu_A 290 QRQGTAEERYQAICQRSEFLWRGLNQLPHVH-CLATS--------------APQAGLVSFTVDSP-LGHRAIVQKLEEQR 353 (390)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHSTTEE-ESCSS--------------CCSSSEEEEEECSS-SCHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHhcCCcE-EecCc--------------cccccEEEEEcCCC-CCHHHHHHHHHHCC
Confidence 23 44556677788888999998876653 32221 12577899998532 12445666665556
Q ss_pred eecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 481 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 481 iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
+.+..|. .++.||||++...+++.++.+.++|+++
T Consensus 354 i~v~~~~--------------------------~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 354 IYLRTIA--------------------------DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp EECEEET--------------------------TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred EEEEecC--------------------------CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 6655442 1468999998877777788888888753
No 46
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.95 E-value=7.5e-26 Score=234.55 Aligned_cols=287 Identities=15% Similarity=0.082 Sum_probs=202.0
Q ss_pred CchhHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC
Q 009167 208 GNPTTVVVEEKMSALEGAES----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~----~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~ 283 (541)
..+..+++++++++++|.+. ++++++|++|+. ++.+++++||+|+++.+.|++. .+...+...|.++..++.+
T Consensus 33 ~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~--~~~~~~~~~g~~~~~v~~~ 109 (384)
T 3zrp_A 33 FVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGD--RWEQIFKRYPVNVKVLRPS 109 (384)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHH--HHHHHHTTSSCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchH--HHHHHHHHcCCcEEEecCC
Confidence 35678899999999999854 677778889999 9999999999999999999763 2334556779999888754
Q ss_pred -----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcEEEECCcc
Q 009167 284 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (541)
Q Consensus 284 -----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDivv~S~sK 357 (541)
|+++|+++++++++++|++++|+||||.+.|+++|.++|++||++||+|++++.+.. .+....++|+++.|+||
T Consensus 110 ~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 189 (384)
T 3zrp_A 110 PGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQK 189 (384)
T ss_dssp TTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTS
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCcc
Confidence 899999999864599999999999999999999999999999999999999875432 33345679999999999
Q ss_pred ccCCCCCceEEEEEeChHHHHHH-------------HHHhh---h----c---CCCchHHHHHHHHHhHHH-----HHHH
Q 009167 358 FIGGHNDVLAGSISGSGKLVTQI-------------RNLHH---V----L---GGALNPNAAYLIIRGMKT-----LHLR 409 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~~~li~~l-------------~~~~~---~----~---G~~~s~~~a~l~l~~l~t-----l~~r 409 (541)
+++++.+ +|++++++++++.+ ..... . . .++.+......+...++. +...
T Consensus 190 ~~~~~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~ 267 (384)
T 3zrp_A 190 ALGSAAG--LGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENR 267 (384)
T ss_dssp TTCCCSS--EEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred cccCCCc--eEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 8865432 68999999887776 22211 1 0 013333333322233332 3445
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcc
Q 009167 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 489 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~ 489 (541)
.++..++++.+.+.|+++ ++. +..|. +. ...+++++|.+++ .....+.+.|...++.++.|..+
T Consensus 268 ~~~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~ 331 (384)
T 3zrp_A 268 IKRHTMVASAIRAGLEAL-GLE-IVARR----PE--------SYSNTVTGVILKV--ADPQKVLAGTVNEGVEFAPGVHP 331 (384)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCC-BSCSS----GG--------GBCSSEEEEECSS--SCHHHHHHHHHTTTCCCEECCCT
T ss_pred HHHHHHHHHHHHHHHHHC-CCe-EccCc----cc--------ccCccEEEEECCC--CCHHHHHHHHHHCCEEEecCCCC
Confidence 556667788888888876 332 11111 00 1246788999875 23556777776667776655321
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH----HHHHHHHHHHHh
Q 009167 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF----EDLKADVLQALH 539 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~----edli~dL~~AL~ 539 (541)
..+.|||+++...+ +++++.|.++++
T Consensus 332 ------------------------~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~ 361 (384)
T 3zrp_A 332 ------------------------AFKYFRIGHMGWVTPNDAIIAISVIERTLR 361 (384)
T ss_dssp ------------------------TCCEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred ------------------------CcCEEEEeccccCCHHHHHHHHHHHHHHHH
Confidence 01689999986544 444555555443
No 47
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.95 E-value=1.1e-25 Score=237.18 Aligned_cols=281 Identities=13% Similarity=0.121 Sum_probs=204.7
Q ss_pred hhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHH
Q 009167 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLE 289 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le 289 (541)
+..+++++++++++|.+..+++++|++|+..++.+++++||.|+++.+.|+++...+ ...|.++..++..|+++|+
T Consensus 104 ~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~d~~~le 179 (409)
T 3kki_A 104 YDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGA----RYANAQAHPFMHNNCDHLR 179 (409)
T ss_dssp TTSCHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHH----HHTTCEEEEECTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHH----HHcCCeEEEecCCCHHHHH
Confidence 556789999999999998999999999999999999999999999999998876443 3457888888888999999
Q ss_pred HhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc-------cc--cccCCcEEEECCccccC
Q 009167 290 AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KA--LSLGADLVLHSATKFIG 360 (541)
Q Consensus 290 ~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~-------~~--~~~gaDivv~S~sK~lg 360 (541)
++++++++++|++++|+||||.+.|+++|.++|++||++||+||+|+.+... .. ...++|+++.|++|.++
T Consensus 180 ~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~ 259 (409)
T 3kki_A 180 MLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFA 259 (409)
T ss_dssp HHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC
T ss_pred HHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhC
Confidence 9997534899999999999999999999999999999999999998763321 01 12257899999999998
Q ss_pred CCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCCceEEeC
Q 009167 361 GHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKVKRVHY 435 (541)
Q Consensus 361 g~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~v~~v~~ 435 (541)
+. +|++++++++++.++.... .++...++..+..+...++.+ ....++..++++.+.+.|++.. + ..
T Consensus 260 ~~----gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~---~~ 331 (409)
T 3kki_A 260 YR----AGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLG-L---TI 331 (409)
T ss_dssp SS----CEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTT-C---CC
T ss_pred CC----ceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-C---cc
Confidence 66 4999999888877765322 244445565544444444443 3444555677788888887652 1 11
Q ss_pred CCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCC
Q 009167 436 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 515 (541)
Q Consensus 436 P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~ 515 (541)
+ +.+.++++.++. .....++.+.|...++.+..+.. |.. ...+
T Consensus 332 ~----------------~~~~~~~~~~~~-~~~~~~~~~~L~~~Gv~v~~~~~------~~~--------------~~~~ 374 (409)
T 3kki_A 332 R----------------SESQIIGLETGD-ERNTEKVRDYLESNGVFGSVFCR------PAT--------------SKNK 374 (409)
T ss_dssp C----------------CSSSEEEEEEES-HHHHHHHHHHHHHTTEECEEECT------TSS--------------CTTC
T ss_pred C----------------CCCCEEEEEeCC-HHHHHHHHHHHHHCCceEeeeCC------CCc--------------CCCC
Confidence 1 246789999974 34556677777665766543211 110 1135
Q ss_pred CeEEEEecCCCHHHHHHHHHHHHh
Q 009167 516 NLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 516 ~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
+.|||+++...+++.++.+.++|+
T Consensus 375 ~~iRi~~~~~~t~e~i~~~~~~l~ 398 (409)
T 3kki_A 375 NIIRLSLNSDVNDEQIAKIIEVCS 398 (409)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHH
T ss_pred cEEEEEccCCCCHHHHHHHHHHHH
Confidence 799999986555444444444443
No 48
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.95 E-value=1.8e-25 Score=232.70 Aligned_cols=280 Identities=14% Similarity=0.104 Sum_probs=200.6
Q ss_pred CCCccCCCCchhHHHHHHHHHHHhC--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 200 ASFEYGRYGNPTTVVVEEKMSALEG--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 200 ~~~~Y~R~~~p~~~~Le~~LA~l~g--~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
..+.|+.+..+..+++++.+++++| . ++++++++|++|+.+++.+++++||+|+++.++|++.... +...|.
T Consensus 61 ~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~ 136 (391)
T 4dq6_A 61 EIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSV----VKNNNR 136 (391)
T ss_dssp CCCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHH----HHHTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHH----HHHcCC
Confidence 3567887777888899999999988 3 5678888888999999999999999999999999986643 345688
Q ss_pred EEEEeCCC---------CHHHHHHhccCCCceEEEEeCCCCCCCccc---cHHHHHHHHHhCCCEEEEeCCCCCCCcc--
Q 009167 276 TATVIDPA---------DMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (541)
Q Consensus 276 ~v~~vd~~---------d~e~Le~al~~~~tklV~lesP~NPtG~i~---dl~~Ia~la~~~gi~lIvDea~a~~~~~-- 341 (541)
++..++.+ |+++|++++++ +++|++++|+||||.++ ++++|+++|++||+++|+|++|+.....
T Consensus 137 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~ 214 (391)
T 4dq6_A 137 ELIISPLQKLENGNYIMDYEDIENKIKD--VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH 214 (391)
T ss_dssp EEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC
T ss_pred eEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCC
Confidence 88877654 89999999976 89999999999999995 4778999999999999999998753221
Q ss_pred ---ccccc-----CCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCC-CchHHHHHHHHHhHHH----HH
Q 009167 342 ---KALSL-----GADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGG-ALNPNAAYLIIRGMKT----LH 407 (541)
Q Consensus 342 ---~~~~~-----gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~-~~s~~~a~l~l~~l~t----l~ 407 (541)
..... +.++++.|+||.++.+| ...|++++++ ++++.++......+. ..++..+..+...++. +.
T Consensus 215 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 293 (391)
T 4dq6_A 215 KHIPMASISKEFEKNTITCMAPTKTFNIAG-LQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLE 293 (391)
T ss_dssp CCCCGGGSCHHHHHTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHH
T ss_pred CccCHHHcCccccCcEEEEEechhhccCcc-cceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHH
Confidence 11122 33489999999997554 3578888775 888888776544332 4455544444444433 44
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCc-Ceeccc
Q 009167 408 LRVQQQNSTALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSF 485 (541)
Q Consensus 408 ~r~~~~~~~a~~la~~L~~-~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~-~iavS~ 485 (541)
.+.++..++++.+.+.|++ .|.+..+ .|. .+.++++.++........+.+.|... ++.++.
T Consensus 294 ~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 356 (391)
T 4dq6_A 294 SFLEYLESNIDFAIKYINENMPKLKVR-KPE----------------GTYLLWVDFSALGLSDEELESILVQKGKVALNQ 356 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSEEC-CCS----------------BSSEEEEECGGGCCCHHHHHHHHHHTTCEECEE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCEec-CCC----------------ccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeC
Confidence 5556666788888888887 5665422 221 23456788863112345666666555 888777
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009167 486 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 486 G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
|..+.. ..++.+|||++.
T Consensus 357 g~~~~~---------------------~~~~~iRis~~~ 374 (391)
T 4dq6_A 357 GNSFGI---------------------GGSGYQRINLAC 374 (391)
T ss_dssp GGGGCT---------------------TCTTEEEEECCS
T ss_pred chhhCC---------------------CCCCeEEEEEcC
Confidence 654321 125799999994
No 49
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.94 E-value=1.7e-26 Score=240.16 Aligned_cols=304 Identities=13% Similarity=0.127 Sum_probs=214.2
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC--
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-- 283 (541)
+..+..+++|++||+++|.+++++++||++|+.+++.++ +++||+|+++.++|+++...+ ...|.++.+++.+
T Consensus 33 ~~~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~~~~~~~~~ 108 (373)
T 3frk_A 33 ILGDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAV----SYTGAKPIFVEPDIR 108 (373)
T ss_dssp SSSHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHH----HHHSCEEEEECEETT
T ss_pred cCCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEecccc
Confidence 356889999999999999999999999999999999999 999999999999999976443 4457888887754
Q ss_pred ----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccC--CcEEEECCc-
Q 009167 284 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT- 356 (541)
Q Consensus 284 ----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~g--aDivv~S~s- 356 (541)
|+++|++++++ ++++|+ |+||+|.+.|+++|.++|+++|++||+|++++.+...+....+ .|+++.|++
T Consensus 109 ~~~~d~~~l~~~l~~-~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~ 184 (373)
T 3frk_A 109 TYNIDPSLIESAITE-KTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYP 184 (373)
T ss_dssp TTEECGGGTGGGCCT-TEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCT
T ss_pred ccCcCHHHHHHhcCC-CCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCEeccccccEEEEeCcC
Confidence 89999999987 599888 6889999999999999999999999999999875544433444 799999966
Q ss_pred -cccCCCCCceEEEEEeC-hHHHHHHHHHhhh------------cCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 009167 357 -KFIGGHNDVLAGSISGS-GKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAK 422 (541)
Q Consensus 357 -K~lgg~gd~~gG~lv~~-~~li~~l~~~~~~------------~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~ 422 (541)
|++++++ .+|+++++ +++.++++..... +...+.+..+.+.+..++.+....++..++++++.+
T Consensus 185 ~K~l~~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (373)
T 3frk_A 185 AKNLGSLG--DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIA 262 (373)
T ss_dssp TSSSCCSS--SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCccCccc--eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998855 37888876 4577776654321 112245666666665666666666777777788888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcccccc-
Q 009167 423 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW- 501 (541)
Q Consensus 423 ~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~- 501 (541)
.|++.+ + ..|..+.... ....++.+... ....+.+.|...++.++.+....+.+.|......
T Consensus 263 ~l~~~~-~---~~~~~~~~~~---------~~~~~~~~~~~----~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~ 325 (373)
T 3frk_A 263 GINNPN-V---IIPVEADYAK---------HVWYTFVIRSE----KRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGF 325 (373)
T ss_dssp HCCCTT-E---ECCCCCTTEE---------CCCSSEEEEES----SHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCC
T ss_pred HhccCc-e---EeccCCCCCc---------eeeEEEEEEeC----CHHHHHHHHHHCCCCcccCcCCccccChHHHhcCC
Confidence 777655 3 2332211000 01122344443 2345666666667777765432333333221110
Q ss_pred ---CCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 502 ---DLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 502 ---~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
.++..+. +.++.|||+++...+++.++.+.++|+++
T Consensus 326 ~~~~~~~~~~----~~~~~lrl~~~~~~t~~di~~~~~~l~~~ 364 (373)
T 3frk_A 326 KTGNFPIAEK----IANEILSIPIWYGMKNEEIEYVIDKINAW 364 (373)
T ss_dssp CTTSSHHHHH----HHHHEEEECCCTTCCHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHH----HHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 1111111 12368999999999999999999998763
No 50
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.94 E-value=3e-26 Score=240.28 Aligned_cols=288 Identities=16% Similarity=0.185 Sum_probs=206.1
Q ss_pred CCchhHHHHHHHHHHHhCC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 207 YGNPTTVVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~-----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+..+++++.+++++|. ++++++++|++|+.+++.+++++||+|+++.++|.+.... ++..|.++..++
T Consensus 79 g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~ 154 (407)
T 3nra_A 79 GDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKL----VEFFEGEMVPVQ 154 (407)
T ss_dssp CCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHH----HHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHH----HHHcCCEEEEee
Confidence 3456778888889888886 5677777778999999999999999999999999986543 344577777665
Q ss_pred C-----------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc-------
Q 009167 282 P-----------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN------- 340 (541)
Q Consensus 282 ~-----------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~------- 340 (541)
. .|+++|++++++ ++++|++++|+||||.++| +++|+++|++||+++|+|++|+.+..
T Consensus 155 ~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~ 233 (407)
T 3nra_A 155 LDYVSADETRAGLDLTGLEEAFKA-GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTH 233 (407)
T ss_dssp BCCCSSCCSSCCBCHHHHHHHHHT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCC
T ss_pred cccccccCcCCCcCHHHHHHHHhh-CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCC
Confidence 4 289999999987 5999999999999999999 88999999999999999999875321
Q ss_pred cccc---ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHH
Q 009167 341 QKAL---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQ 413 (541)
Q Consensus 341 ~~~~---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~ 413 (541)
.... ..+.++++.|+||.++..| ..+|++++++++++.++.....+....++..++.+...++ .+..+.++.
T Consensus 234 ~~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 312 (407)
T 3nra_A 234 LRAEAAVDAENVVTIMGPSKTESLSG-YRLGVAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARH 312 (407)
T ss_dssp GGGCTTSCGGGEEEEECSSSTTCCGG-GCCEEEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHH
T ss_pred hhhcCcccCCcEEEEeCcccccCCCe-eeEEEEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHH
Confidence 1111 1346799999999998554 3578999999999988877666655555655544443332 355566677
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCccccc
Q 009167 414 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIV 492 (541)
Q Consensus 414 ~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~ 492 (541)
.++++.+.+.|+++|.+.. ..| ..|.++++.++........+.+.|. ..++.++.|..+.
T Consensus 313 ~~~~~~l~~~L~~~~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-- 373 (407)
T 3nra_A 313 QAIRDELLHVLRGCEGVFA-RTP----------------QAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFS-- 373 (407)
T ss_dssp HHHHHHHHHHHHTSTTCBC-CCC----------------SBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTC--
T ss_pred HHHHHHHHHHHhcCCCcee-ccC----------------CeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhC--
Confidence 7788888899988765431 111 1356777777641123445666663 3477777765432
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHHh
Q 009167 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQALH 539 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~---edli~dL~~AL~ 539 (541)
+ ..++.||||++. +. +..++.|.++++
T Consensus 374 --~-----------------~~~~~iRis~~~-~~~~i~~~~~~l~~~~~ 403 (407)
T 3nra_A 374 --P-----------------HTADSVRLNFSQ-DHEAAVAAARRIVTLVE 403 (407)
T ss_dssp --T-----------------TCTTBEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred --C-----------------CCCCEEEEEeCC-CHHHHHHHHHHHHHHHH
Confidence 1 135789999996 33 334445555544
No 51
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.94 E-value=1.6e-25 Score=230.93 Aligned_cols=283 Identities=16% Similarity=0.163 Sum_probs=204.9
Q ss_pred CCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+++...+++++||++++. +.++++++|++|+.+++..+ |+|+++.++|++.... ++..|.++..++.
T Consensus 56 ~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~~----~~~~g~~~~~~~~ 127 (361)
T 3ftb_A 56 GVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----EKILIIVPSYAEYEIN----AKKHGVSVVFSYL 127 (361)
T ss_dssp GSCCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC----SEEEEEESCCTHHHHH----HHHTTCEEEEEEC
T ss_pred cCCCCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc----CcEEEecCChHHHHHH----HHHcCCeEEEeec
Confidence 455677789999999999986 45666777789999999877 9999999999986543 3445888877763
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc---cccc----ccC
Q 009167 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN---QKAL----SLG 347 (541)
Q Consensus 283 -----~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~---~~~~----~~g 347 (541)
.++++|++++++ +++|++++|+||||.++| +++|+++|++||+++|+|++|+.... .... ..+
T Consensus 128 ~~~~~~~~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 205 (361)
T 3ftb_A 128 DENMCIDYEDIISKIDD--VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYS 205 (361)
T ss_dssp CTTSCCCHHHHHHHTTT--CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCS
T ss_pred CcccCCCHHHHHHhccC--CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCC
Confidence 367899999976 899999999999999997 55778888899999999999874322 1111 224
Q ss_pred CcEEEECCccccCCCCCceEEEEE-eChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv-~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~ 423 (541)
.++++.|+||.++.+| ...|+++ +++++++.++.....+ ..++..++.+...+ +.+..+.++..++++.+.+.
T Consensus 206 ~~i~~~s~sK~~~~~G-~r~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 282 (361)
T 3ftb_A 206 CLFIIRAMTKFFAMPG-IRFGYGITNNKEIAAKIKAKQNPW--NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEE 282 (361)
T ss_dssp SEEEEEESSSTTSCGG-GCCEEEEESCHHHHHHHHTTSCTT--CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeeChhhcCCCC-cceeEEEeCCHHHHHHHHhhCCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 5588999999998555 3467777 8999998887655433 34555555444444 34455666677888889999
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCC
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 503 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~ 503 (541)
|+++|.+..+..+ .|+++++.+++ ....++.+.|...++.++.|..+.
T Consensus 283 l~~~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~g~~~~------------- 330 (361)
T 3ftb_A 283 LNKIGFIKRVFSP-----------------HANFVLCRLEN--ISGEKLYDSLLKEDIVIRRCCNFI------------- 330 (361)
T ss_dssp HHHSSSEEEEECC-----------------SSSEEEEEESS--SCHHHHHHHHHTTTEECEECTTST-------------
T ss_pred HHhCCCCceecCC-----------------CCeEEEEEcCC--CCHHHHHHHHHHCCeEEeeCccCC-------------
Confidence 9988776523322 46788999975 234566777766688887775432
Q ss_pred CHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHHhh
Q 009167 504 SQSERLKYGIMDNLVRFSFGVED-FEDLKADVLQALHA 540 (541)
Q Consensus 504 ~~~~~~~~gi~~~~IRlSvG~e~-~edli~dL~~AL~~ 540 (541)
+..++.+|||++.++ .+++++.|++.++.
T Consensus 331 --------~~~~~~iRis~~~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 331 --------GLDDSFVRFAIKDEKKNTKFLRALKGVENN 360 (361)
T ss_dssp --------TCCTTEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred --------CCCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 123679999999543 35666666666554
No 52
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.94 E-value=1.1e-25 Score=233.71 Aligned_cols=264 Identities=16% Similarity=0.220 Sum_probs=194.4
Q ss_pred hHHHHHHHHHHHhC------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 211 TTVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~g------~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...+++++||++++ . ++++++++|++|+.+++.+++++||+|+++.++|++.... +...|.++..++
T Consensus 67 ~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~- 141 (370)
T 2z61_A 67 GILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNF----IRFLGAKPVFCD- 141 (370)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHH----HHHTTCEEEEEC-
T ss_pred CCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHH----HHHcCCEEEEeC-
Confidence 46788899998874 2 4678888888999999999999999999999999986543 345688888888
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc----ccccc----cCCcEEEEC
Q 009167 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----QKALS----LGADLVLHS 354 (541)
Q Consensus 283 ~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~----~~~~~----~gaDivv~S 354 (541)
.|+++|++++++ ++++|++++|+||||.++|++ |.++|+++|+++|+|++|..+.. ..... .+.|+++.|
T Consensus 142 ~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s 219 (370)
T 2z61_A 142 FTVESLEEALSD-KTKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILING 219 (370)
T ss_dssp SSHHHHHHHCCS-SEEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEE
T ss_pred CCHHHHHHhccc-CceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEec
Confidence 789999999987 599999999999999999999 99999999999999999876432 12222 367899999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHHhCCC
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALRMAKILEAHPK 429 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t-----l~~r~~~~~~~a~~la~~L~~~p~ 429 (541)
+||+++.+| ...|++++++++++.++..........++...+.+...++. +....++..++++.+.+.|+++ +
T Consensus 220 ~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 297 (370)
T 2z61_A 220 FSKLYAMTG-WRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-G 297 (370)
T ss_dssp STTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred ChhccCCcc-ceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 999997554 45799999999999888766555555566665555555543 2334445556777888888775 3
Q ss_pred ceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCcccccccCccccccCCCHHHH
Q 009167 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 430 v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
+. +..| ..|.+++++++. ....+.+.|. ..++.+..|..+..
T Consensus 298 ~~-~~~~----------------~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~----------------- 340 (370)
T 2z61_A 298 WE-VNNP----------------IGAYYVFPNIGE---DGREFAYKLLKEKFVALTPGIGFGS----------------- 340 (370)
T ss_dssp CB-CCCC----------------CBTTEECCBCSS---CHHHHHHHHHHHHCEECEEGGGGCG-----------------
T ss_pred Ce-ecCC----------------CcceEEEEecCC---CHHHHHHHHHHhCCEEEeCchhhCC-----------------
Confidence 32 1111 134567778764 2345666664 45777776654321
Q ss_pred HhcCCCCCeEEEEecC
Q 009167 509 LKYGIMDNLVRFSFGV 524 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~ 524 (541)
-.++.+|||++.
T Consensus 341 ----~~~~~~Ri~~~~ 352 (370)
T 2z61_A 341 ----KGKNYIRISYAN 352 (370)
T ss_dssp ----GGSSBEEEECCS
T ss_pred ----CCCCEEEEEEeC
Confidence 024689999994
No 53
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.94 E-value=1.8e-25 Score=231.63 Aligned_cols=282 Identities=16% Similarity=0.154 Sum_probs=200.3
Q ss_pred CCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC
Q 009167 206 RYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~ 283 (541)
+|+++...+++++||+++|.+ .++++++|++++.+++..+ +||+|+++.++|++.... ++..|.++..++.+
T Consensus 55 ~y~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~----~~~~g~~~~~v~~~ 128 (364)
T 1lc5_A 55 RYPDADYFHLHQALARHHQVPASWILAGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRA----LAQSGCEIRRWSLR 128 (364)
T ss_dssp SCCCTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHH----HHHTTCEEEEEECC
T ss_pred cCCCCCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHH----HHHcCCeEEEEeCC
Confidence 445566789999999999873 5677777789999999988 789999999999986543 34457787777653
Q ss_pred C------HHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc-----ccc-cccCC
Q 009167 284 D------MEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKA-LSLGA 348 (541)
Q Consensus 284 d------~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~-----~~~-~~~ga 348 (541)
+ ++++.+.+++ ++++|++++|+||||.++| +++|.++|+++|+++|+|++|..+.. ... ...+.
T Consensus 129 ~~~~~~~l~~~~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 207 (364)
T 1lc5_A 129 EADGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPH 207 (364)
T ss_dssp GGGTTCCCTTHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTT
T ss_pred cccccchhHHHHHhccC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCC
Confidence 2 3556666655 4899999999999999999 88999999999999999999875331 111 12467
Q ss_pred cEEEECCccccCCCCCceEEEEE-eChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAKIL 424 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv-~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~a~~la~~L 424 (541)
|+++.|+||+++.+| ...|+++ +++++++.++.....+ ..++..++.+...++. +....++..++++.+.+.|
T Consensus 208 ~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L 284 (364)
T 1lc5_A 208 IWVLRSLTKFYAIPG-LRLGYLVNSDDAAMARMRRQQMPW--SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQAL 284 (364)
T ss_dssp EEEEEESTTTTTCTT-TCCEEEECCCHHHHHHHHHHSCTT--CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECchhhcCCc-cceEEEEECCHHHHHHHHHhCCCC--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999998555 3468998 9999998887765433 4456666665555543 4444555667788888889
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCC
Q 009167 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 504 (541)
Q Consensus 425 ~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~ 504 (541)
+++|.+. + +|. .|+++++.++.+ ...+.+.|...++.+..|..+.
T Consensus 285 ~~~~~~~-~-~~~----------------~g~~~~~~~~~~---~~~l~~~l~~~gi~v~~g~~~~-------------- 329 (364)
T 1lc5_A 285 CQLPLLT-V-YPG----------------RANYLLLRCERE---DIDLQRRLLTQRILIRSCANYP-------------- 329 (364)
T ss_dssp HTSTTEE-E-CCC----------------SSSEEEEEESCT---TCCHHHHHHTTTEECEECTTST--------------
T ss_pred hcCCCCE-E-CCC----------------CCeEEEEECCCc---HHHHHHHHHHCCcEEeeCcccC--------------
Confidence 8876654 2 231 467888988742 2345566655688777765431
Q ss_pred HHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009167 505 QSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALH 539 (541)
Q Consensus 505 ~~~~~~~gi~~~~IRlSvG~e-~~edli~dL~~AL~ 539 (541)
+..++.+|||++.+ +.+.+++.|++.++
T Consensus 330 -------~~~~~~iRis~~~~~~~~~l~~~l~~~~~ 358 (364)
T 1lc5_A 330 -------GLDSRYYRVAIRSAAQNERLLAALRNVLT 358 (364)
T ss_dssp -------TCCTTEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred -------CCCCCEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 11357999999852 23445555555443
No 54
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.94 E-value=2.5e-25 Score=231.39 Aligned_cols=285 Identities=15% Similarity=0.113 Sum_probs=199.7
Q ss_pred CCCc-hhHHHHHHHHHHHh----CCC-----cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 206 RYGN-PTTVVVEEKMSALE----GAE-----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 206 R~~~-p~~~~Le~~LA~l~----g~e-----~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
+|+. +...+++++||+++ |.+ +++++++|++|+.+++.+++++||+|+++.++|++....+ ...|.
T Consensus 58 ~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~----~~~g~ 133 (376)
T 2dou_A 58 GYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAA----RVASL 133 (376)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHH----HHTTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHH----HHcCC
Confidence 4555 46789999999987 763 5667777789999999999999999999999999865433 34577
Q ss_pred EEEEeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc----ccc
Q 009167 276 TATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKA 343 (541)
Q Consensus 276 ~v~~vd~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~----~~~ 343 (541)
++..++. .|+++|++++++ ++++|++++|+||||.++| +++|+++|+++|+++|+|++|..+.. ...
T Consensus 134 ~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~ 212 (376)
T 2dou_A 134 RTFLIPLREDGLADLKAVPEGVWR-EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSP 212 (376)
T ss_dssp EEEEECBCTTSSBCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCG
T ss_pred EEEEeeCCCCCCCCHHHHHHhhcc-CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCh
Confidence 8877764 378888888865 4899999999999999997 56889999999999999999875321 112
Q ss_pred cc----cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----HHHHHHHHHH
Q 009167 344 LS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNS 415 (541)
Q Consensus 344 ~~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~ 415 (541)
.. .+.++++.|+||.++.+| ...|++++++++++.++......+...++..+..+...++. +....++..+
T Consensus 213 ~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 291 (376)
T 2dou_A 213 LALPGAKERVVELFSLSKSYNLAG-FRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRE 291 (376)
T ss_dssp GGSTTGGGTEEEEEEHHHHHTCGG-GCCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred hhcCCCCCcEEEEecchhhcCChh-heeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 22 256799999999997554 35789999999999888766555444455555444444432 3444455567
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccC
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
+++.+.+.|+++ + .+..|. .|.+++++++.+ .....+.+.|...++.+..|..+..
T Consensus 292 ~~~~l~~~L~~~--~-~~~~~~----------------~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~f~~---- 347 (376)
T 2dou_A 292 RALGMAEALKGV--L-SLLPPR----------------ATMYLWGRLPEG-VDDLEFGLRLVERGVALAPGRGFGP---- 347 (376)
T ss_dssp HHHHHHHHHTTT--S-EECCCC----------------BSSEEEEECCTT-CCHHHHHHHHHHTTEECEEGGGGCG----
T ss_pred HHHHHHHHHHHh--c-CccCCC----------------eeEEEEEECCCC-CCHHHHHHHHHHCCEEEcCchhhCC----
Confidence 777888888765 3 222121 355788998642 1234566666555777776644311
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
..++.+|||++. +. +.++.+.+.|.
T Consensus 348 -----------------~~~~~~Ris~~~-~~-~~i~~~l~~l~ 372 (376)
T 2dou_A 348 -----------------GGKGFVRIALVR-PL-EELLEAAKRIR 372 (376)
T ss_dssp -----------------GGTTEEEEECCS-CH-HHHHHHHHHHH
T ss_pred -----------------CCCCeEEEEecC-CH-HHHHHHHHHHH
Confidence 025789999986 33 33444444443
No 55
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.94 E-value=5.3e-25 Score=230.27 Aligned_cols=271 Identities=14% Similarity=0.138 Sum_probs=188.9
Q ss_pred hHHHHHHHHHHHh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 211 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...+|+++|++++ |. ++++++++|++|+.+++.+++++||+|+++.|+|.+.... ++..|.++..++.
T Consensus 69 g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~ 144 (385)
T 1b5p_A 69 GIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEM----VRFAGGVVVEVET 144 (385)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH----HHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH----HHHcCCEEEEeec
Confidence 3567888888876 32 3566666777999999999999999999999999876543 3456777777764
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----ccccc--
Q 009167 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSL-- 346 (541)
Q Consensus 283 -------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----~~~~~-- 346 (541)
.|+++|++++++ ++++|++++|+||||.+++ +++|+++|++||++||+|++|+..... ....+
T Consensus 145 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 223 (385)
T 1b5p_A 145 LPEEGFVPDPERVRRAITP-RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAP 223 (385)
T ss_dssp CGGGTTCCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCT
T ss_pred CcccCCCCCHHHHHHhcCC-CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCC
Confidence 378999999987 4999999999999999987 789999999999999999998764321 11222
Q ss_pred CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH-------HHHHHHHHHHHHHHH
Q 009167 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-------TLHLRVQQQNSTALR 419 (541)
Q Consensus 347 gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~-------tl~~r~~~~~~~a~~ 419 (541)
+.++++.|+||.++.+| ...|++++++++++.++..........+....+.+...++ .+....++..++++.
T Consensus 224 ~~~i~~~s~SK~~~~~G-~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 302 (385)
T 1b5p_A 224 EHTLTVNGAAKAFAMTG-WRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDL 302 (385)
T ss_dssp TTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEechhhcCCcc-cceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHH
Confidence 56899999999998665 4579999999998888776544333444444443333332 233344555566777
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcccc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
+.+.|+++ ++. +..|. .|.++++.++.......++.+.|...++.+..|..+
T Consensus 303 l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f---------- 354 (385)
T 1b5p_A 303 LLEGLTAL-GLK-AVRPS----------------GAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDF---------- 354 (385)
T ss_dssp HHHHHHHH-TCC-BCCCS----------------BTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGG----------
T ss_pred HHHHHHHC-CCe-ecCCC----------------eeEEEEEecCCCCCCHHHHHHHHHHCCeEEeccccc----------
Confidence 77888765 332 11111 344677777521012445666666667777776442
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009167 500 YWDLSQSERLKYGIMDNLVRFSFGVEDFED 529 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~~~~IRlSvG~e~~ed 529 (541)
+. ++.+|||++ .+.++
T Consensus 355 ------------~~-~~~iRis~~-~~~~~ 370 (385)
T 1b5p_A 355 ------------AA-FGHVRLSYA-TSEEN 370 (385)
T ss_dssp ------------TC-TTEEEEECC-SCHHH
T ss_pred ------------CC-CCeEEEEec-CCHHH
Confidence 11 468999999 34443
No 56
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.94 E-value=1.4e-25 Score=234.40 Aligned_cols=309 Identities=15% Similarity=0.137 Sum_probs=214.7
Q ss_pred cCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
|+++..+...++|++||+++|.++.++++||++|+.+++.++ +++||+|+++.++|+++...+ ...|.++.+++.
T Consensus 32 ~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~~~v~~ 107 (388)
T 1b9h_A 32 WWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAA----QRLGAVTVPVDV 107 (388)
T ss_dssp CBTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECB
T ss_pred eeecCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHHHHHHH----HHcCCEEEEEec
Confidence 455677889999999999999988999999999999999999 899999999999999976433 456888888764
Q ss_pred ------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc---cccccCCcEEEE
Q 009167 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KALSLGADLVLH 353 (541)
Q Consensus 283 ------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~---~~~~~gaDivv~ 353 (541)
.|+++|++++++ ++++|+ |+||||.+.|+++|.++|+++|++||+|++++.+... ....++ |+++.
T Consensus 108 ~~~~~~~d~~~l~~~i~~-~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~-~i~~~ 182 (388)
T 1b9h_A 108 DAATYNLDPEAVAAAVTP-RTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELD-SIATF 182 (388)
T ss_dssp CTTTCCBCHHHHHHHCCT-TEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSS-SCEEE
T ss_pred CCCcCCCCHHHHHHhcCc-CceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeeccccc-ceEEE
Confidence 279999999987 488887 8999999999999999999999999999999865432 122233 67777
Q ss_pred CCc--cccCCCCCceEEEEEeChH-H--HHHHHHHhhh-------------cCC--CchHHHHHHHHHhHHHHHHHHHHH
Q 009167 354 SAT--KFIGGHNDVLAGSISGSGK-L--VTQIRNLHHV-------------LGG--ALNPNAAYLIIRGMKTLHLRVQQQ 413 (541)
Q Consensus 354 S~s--K~lgg~gd~~gG~lv~~~~-l--i~~l~~~~~~-------------~G~--~~s~~~a~l~l~~l~tl~~r~~~~ 413 (541)
|++ |+++|+ .+|+++++++ + ++.++..... .|. .+++..++++...++.+..+.++.
T Consensus 183 S~s~~K~l~g~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~ 259 (388)
T 1b9h_A 183 SFQNGKLMTAG---EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVR 259 (388)
T ss_dssp ECCTTSSSCSS---SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHH
T ss_pred EccCCCcccCC---CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 766 777664 3788888775 5 5655433210 122 256666666666777777777888
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHHHHccCcCeecccCCccccc
Q 009167 414 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIV 492 (541)
Q Consensus 414 ~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~~~~iavS~G~~~sl~ 492 (541)
.++++.+.+.|+++|.+..+ .+.-... ...+++++|.+++. ......+.+.|...++.++.+.. .+.
T Consensus 260 ~~~~~~l~~~L~~~~~~~~~-~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~~~ 327 (388)
T 1b9h_A 260 DERWTLLSRLLGAIDGVVPQ-GGDVRAD----------RNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFR-AIY 327 (388)
T ss_dssp HHHHHHHHHHHHTSTTCEEC-CCCTTCC----------BCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCC-CGG
T ss_pred HHHHHHHHHHhccCCCcccc-CCCcCCC----------ccceEEEEEEeCCcCcccHHHHHHHHHHCCCCcccccC-ccc
Confidence 88899999999987766422 2110000 11467899999752 23566777777766777765432 111
Q ss_pred ccCcccccc-----------CCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHHhh
Q 009167 493 DQPAIMSYW-----------DLSQSERLKYGIMDNLVRFSFGVED-FEDLKADVLQALHA 540 (541)
Q Consensus 493 ~~pa~~~~~-----------~~~~~~~~~~gi~~~~IRlSvG~e~-~edli~dL~~AL~~ 540 (541)
..|...... .++...+ +..+.|||+++... +++.++.+.++|.+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~l~~~~~~~t~edi~~~~~~l~~ 383 (388)
T 1b9h_A 328 RTDAFWELGAPDESVDAIARRCPNTDA----ISSDCVWLHHRVLLAGEPELHATAEIIAD 383 (388)
T ss_dssp GSHHHHHSSCCSSCHHHHHHTCHHHHH----HHHHEEEEEGGGGGSCHHHHHHHHHHHHH
T ss_pred cChHhHhcCCCcccccccccCCHHHHH----HHhCeEEecCCCCCCCHHHHHHHHHHHHH
Confidence 111000000 0111111 12357999998777 66666666666653
No 57
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.94 E-value=8.8e-26 Score=234.02 Aligned_cols=303 Identities=15% Similarity=0.089 Sum_probs=202.6
Q ss_pred CchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc----cCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 208 GNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all----~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
..+...+++++|++++|.+ .++++++|++|+.+++.++. ++||+|+++.++|++....+. .+...|.++..++
T Consensus 42 ~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~ 120 (384)
T 1eg5_A 42 ANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMK-YLSMKGFKVKYVP 120 (384)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHH-HHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHH-HHHhcCCEEEEEc
Confidence 3566789999999999974 67888888999999999987 799999999999998765543 3355688888887
Q ss_pred C-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC--CEEEEeCCCCCCC-cccccccCCcEEEE
Q 009167 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPL-NQKALSLGADLVLH 353 (541)
Q Consensus 282 ~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g--i~lIvDea~a~~~-~~~~~~~gaDivv~ 353 (541)
. .|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++| ++||+|++++.+. ..+....++|+++.
T Consensus 121 ~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~ 199 (384)
T 1eg5_A 121 VDSRGVVKLEELEKLVDE-DTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASF 199 (384)
T ss_dssp BCTTSCBCHHHHHHHCCT-TEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEE
T ss_pred cCCCCccCHHHHHHHhCC-CCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEe
Confidence 5 379999999987 5999999999999999999999999999999 9999999976332 12222347899999
Q ss_pred CCccccCCCCCceEEEEEeChHH--HHHHHHH---hhhcCCCchHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH
Q 009167 354 SATKFIGGHNDVLAGSISGSGKL--VTQIRNL---HHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKIL 424 (541)
Q Consensus 354 S~sK~lgg~gd~~gG~lv~~~~l--i~~l~~~---~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~a~~la~~L 424 (541)
|+||++|+.| .|++++++++ ...+... .....+..+......+...++. +....++..++++.+.+.|
T Consensus 200 s~sK~~g~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 276 (384)
T 1eg5_A 200 SAHKFHGPKG---VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGL 276 (384)
T ss_dssp EGGGGTSCTT---CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHhcCCCc---eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 9999988766 4888888765 2221110 0112223444444433344443 3344556667788888888
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCC
Q 009167 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 504 (541)
Q Consensus 425 ~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~ 504 (541)
++ +++. +..|.- .+.+.+++|.+++. ....+.+.|...++.+..|..+..... . +
T Consensus 277 ~~-~g~~-~~~~~~-------------~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~~~~~--~------~ 331 (384)
T 1eg5_A 277 MN-LGAH-IITPLE-------------ISLPNTLSVSFPNI--RGSTLQNLLSGYGIYVSTSSACTSKDE--R------L 331 (384)
T ss_dssp HT-TTCE-ECSCTT-------------SBCTTEEEEECTTC--CHHHHHHHHHHTTEECBC-------------------
T ss_pred CC-CCeE-EeCCcc-------------cCCCCEEEEEeCCC--CHHHHHHHHhhCCeEEeccccccCCCC--c------c
Confidence 77 4543 322210 01356788888642 245666777667888888764422100 0 0
Q ss_pred HHHHHhcCCC----CCeEEEEecCCC----HHHHHHHHHHHHhh
Q 009167 505 QSERLKYGIM----DNLVRFSFGVED----FEDLKADVLQALHA 540 (541)
Q Consensus 505 ~~~~~~~gi~----~~~IRlSvG~e~----~edli~dL~~AL~~ 540 (541)
......+|++ ++.|||+++... .+.+++.|.+++++
T Consensus 332 ~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 375 (384)
T 1eg5_A 332 RHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSF 375 (384)
T ss_dssp -CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 0112334443 478999999543 34455555555543
No 58
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.94 E-value=3.2e-25 Score=230.44 Aligned_cols=302 Identities=17% Similarity=0.206 Sum_probs=219.1
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC---
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
.++...++|+++|+++|.+++++++||++|+.+++.++ +++||+|+++.++|+++...+ ...|.++.+++.+
T Consensus 33 ~~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~----~~~G~~~~~~~~~~~~ 108 (367)
T 3nyt_A 33 LGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETV----ALLGAKPVYVDIDPRT 108 (367)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHH----HHcCCEEEEEecCCcc
Confidence 57889999999999999999999999999999999999 899999999999999876443 4458888888643
Q ss_pred ---CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCC--cEEEECC--c
Q 009167 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA--DLVLHSA--T 356 (541)
Q Consensus 284 ---d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~ga--Divv~S~--s 356 (541)
|+++|++++++ ++++|+ |+||+|.+.|+++|.++|+++|++||+|++++.+...+....+. |+++.|| +
T Consensus 109 ~~~d~~~l~~~i~~-~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~ 184 (367)
T 3nyt_A 109 YNLDPQLLEAAITP-RTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPS 184 (367)
T ss_dssp CSBCGGGTGGGCCT-TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTT
T ss_pred CCcCHHHHHHhcCc-CCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccCCCCEEEEECCCC
Confidence 89999999987 489887 78999999999999999999999999999988655443333344 9999997 8
Q ss_pred cccCCCCCceEEEEEe-ChHHHHHHHHHhhh------------cCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 009167 357 KFIGGHNDVLAGSISG-SGKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 357 K~lgg~gd~~gG~lv~-~~~li~~l~~~~~~------------~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~ 423 (541)
|++++.|. +|+++. ++++.++++..... ++..+++..+++++..++.+....++..++++++.+.
T Consensus 185 K~l~~~g~--gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~ 262 (367)
T 3nyt_A 185 APLGCYGD--GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLS 262 (367)
T ss_dssp SSSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCcCc--eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998663 788887 56777777664431 2344677777777777887777778888888999999
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccc-cccC
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM-SYWD 502 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~-~~~~ 502 (541)
|++.+ + ..|...... .....++.+.++ + ...+.+.|+..++.++.+....+...|... ....
T Consensus 263 L~~~~-~---~~~~~~~~~---------~~~~~~~~~~~~-~---~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~ 325 (367)
T 3nyt_A 263 LKQVG-I---GTPFIEVNN---------ISVYAQYTVRMD-N---RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAK 325 (367)
T ss_dssp HHHTT-C---CCCCCCTTE---------ECCCSSEEEECS-S---HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCC
T ss_pred hccCC-e---eccCCCCCC---------ceeeEEEEEEeC-C---HHHHHHHHHHCCCceeccCCCccccChhhhccCCC
Confidence 98764 2 122211100 001224455554 2 345666666667777665432332233221 1111
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 503 LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
++..+. +.++.|||+++...+++.++.+.+++.+
T Consensus 326 ~~~~~~----~~~~~l~lp~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 326 LPVGDK----AATQVMSLPMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp CHHHHH----HHHHEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred ChHHHH----HHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 221111 2356899999999888889999888875
No 59
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.94 E-value=6.9e-25 Score=227.73 Aligned_cols=280 Identities=16% Similarity=0.089 Sum_probs=201.4
Q ss_pred CCccCCCCchhHHHHHHHHHHHhC--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALEG--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g--~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
.+.|+....+..+++++.+++++| . +.++++++|++|+.+++.+++++||+|+++.++|++.... +...|.+
T Consensus 54 ~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~----~~~~g~~ 129 (383)
T 3kax_A 54 IFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEM----VTTNNRQ 129 (383)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHH----HHHTTCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHH----HHHcCCE
Confidence 456776677888899999999887 2 4678888888999999999999999999999999986643 3456788
Q ss_pred EEEeCC--------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----
Q 009167 277 ATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 277 v~~vd~--------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~---- 341 (541)
+..++. .|+++|++++++ ++++|++++|+||||.++| +++|+++|+++|+++|+|++|......
T Consensus 130 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~ 208 (383)
T 3kax_A 130 LCVSPLQKQNDTYAIDFEHLEKQFQQ-GVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTH 208 (383)
T ss_dssp EEECCCEEETTEEECCHHHHHHHHTT-TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC
T ss_pred EEeccceecCCcEEEcHHHHHHHhCc-CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCc
Confidence 877764 489999999965 5999999999999999998 456666699999999999998753221
Q ss_pred -cccc-----cCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCC-CchHHHHHHHHHhHHH----HHHH
Q 009167 342 -KALS-----LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG-ALNPNAAYLIIRGMKT----LHLR 409 (541)
Q Consensus 342 -~~~~-----~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~-~~s~~~a~l~l~~l~t----l~~r 409 (541)
.... .+.++++.|+||.++.+| ...|++++ ++++++.++......+. +.++..+..+...++. +..+
T Consensus 209 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 287 (383)
T 3kax_A 209 TPFASLSEELAARTITCMAPSKTFNIAG-LQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEI 287 (383)
T ss_dssp CCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHH
T ss_pred eeHhhcCccccCcEEEEEEChhhccCcc-hhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHH
Confidence 1111 255699999999998554 35688887 67888888776554433 4555555444444432 4555
Q ss_pred HHHHHHHHHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCC
Q 009167 410 VQQQNSTALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGG 487 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~-~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~ 487 (541)
.++..++++.+.+.|++ .|.+. +..|. .+.++++.++.......++.+.|. ..++.++.|.
T Consensus 288 ~~~~~~~~~~l~~~l~~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 350 (383)
T 3kax_A 288 RFYIEDNAKFACEYIKDHIPTLS-VMKPE----------------GSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGE 350 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCE-ECCCS----------------BSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESG
T ss_pred HHHHHHHHHHHHHHHHhhCCCce-EecCC----------------ceEEEEEEccccCCCHHHHHHHHHhhCCEEeECch
Confidence 56667788888888887 56653 22221 234566888631123456777774 5688888775
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009167 488 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 488 ~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
.+.. ..++.+|||++.
T Consensus 351 ~~~~---------------------~~~~~iRi~~~~ 366 (383)
T 3kax_A 351 KYGL---------------------GGEEHIGINIGC 366 (383)
T ss_dssp GGCT---------------------TCTTEEEEECSS
T ss_pred hhcC---------------------CCCCeEEEEEcC
Confidence 4321 125799999995
No 60
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.94 E-value=1.6e-25 Score=233.59 Aligned_cols=283 Identities=14% Similarity=0.170 Sum_probs=194.7
Q ss_pred hHHHHHHHHHHHh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 211 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...++++++++++ |. ++++++++|++|+.+++.+++++||+|+++.++|++.... ++..|.++..++.
T Consensus 68 g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~~ 143 (388)
T 1j32_A 68 GEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEM----VKLAEGTPVILPT 143 (388)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHH----HHHTTCEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHcCCEEEEecC
Confidence 3567888888776 32 4566666778999999999999999999999999986543 3446788887764
Q ss_pred C-------CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-----cccc--
Q 009167 283 A-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS-- 345 (541)
Q Consensus 283 ~-------d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-----~~~~-- 345 (541)
+ |+++|++++++ ++++|++++|+||||.++| +++|.++|+++|+++|+|++|+..... ....
T Consensus 144 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 222 (388)
T 1j32_A 144 TVETQFKVSPEQIRQAITP-KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAAS 222 (388)
T ss_dssp CGGGTTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSC
T ss_pred CcccCCCCCHHHHHHhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHcc
Confidence 2 78999999987 4999999999999999976 889999999999999999998754221 1111
Q ss_pred ---cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHHH
Q 009167 346 ---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTAL 418 (541)
Q Consensus 346 ---~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a~ 418 (541)
.+.|+++.|+||+++.+| ...|++++++++++.++..........++..++.+...++ .+....++..++++
T Consensus 223 ~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 301 (388)
T 1j32_A 223 PEAYERSVVCSGFAKTYAMTG-WRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRR 301 (388)
T ss_dssp HHHHHTEEEEEESTTTTTCTT-TCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHH
T ss_pred ccccCCEEEEeechhccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 457899999999997555 3579999999998888776554444455555544444443 24445556667788
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccC-cCeecccCCcccccccCcc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~-~~iavS~G~~~sl~~~pa~ 497 (541)
.+.+.|++.|++. +..|. .|.++++.++.......++.+.|.. .++.+..|..+.
T Consensus 302 ~l~~~L~~~~g~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~------- 357 (388)
T 1j32_A 302 YMLDALNAMPGLE-CPKPD----------------GAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFG------- 357 (388)
T ss_dssp HHHHHHHTCTTCB-CCCCC----------------BTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGT-------
T ss_pred HHHHHHhhCCCCc-ccCCC----------------eeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhC-------
Confidence 8888888776543 11111 2345666664200123455665543 477776654321
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009167 498 MSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~ 539 (541)
.++.+|||++.. +.++.++.|.++++
T Consensus 358 ----------------~~~~iRis~~~~~~~i~~~~~~l~~~l~ 385 (388)
T 1j32_A 358 ----------------ADDCIRLSYATDLDTIKRGMERLEKFLH 385 (388)
T ss_dssp ----------------CTTBEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred ----------------CCCcEEEEecCCHHHHHHHHHHHHHHHH
Confidence 146899999842 22334444555544
No 61
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.94 E-value=2e-25 Score=236.54 Aligned_cols=295 Identities=16% Similarity=0.144 Sum_probs=203.2
Q ss_pred CCCchh-HHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhc--cCCC--EEEEcCCCCcchHHHHHhhccc
Q 009167 206 RYGNPT-TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALV--PAGG--HIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 206 R~~~p~-~~~Le~~LA~l~g--------~e~~i~~sSGs~Ai~~al~all--~pGd--~Vlv~~~~y~~~~~~~~~~l~~ 272 (541)
+|+.+. ..+++++||++++ .++++++++|++|+.+++.+++ ++|| +|+++.++|.+....+ ..
T Consensus 77 ~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~----~~ 152 (437)
T 3g0t_A 77 IYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQC----RI 152 (437)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHH----HH
T ss_pred CCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHH----HH
Confidence 344443 5789999999886 2467777777899999999998 9999 9999999999866444 34
Q ss_pred CCeEEEEeCCC------CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc---
Q 009167 273 MGITATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (541)
Q Consensus 273 ~Gi~v~~vd~~------d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~--- 340 (541)
.|.++..++.+ |+++|+++++..++++|++++|+||||.+++ +++|+++|+++|++||+|++|+....
T Consensus 153 ~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~ 232 (437)
T 3g0t_A 153 LGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKD 232 (437)
T ss_dssp HTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSC
T ss_pred cCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCC
Confidence 56677666542 7899999993335999999999999999997 66789999999999999999874221
Q ss_pred --c--------ccc-ccCCcEEEECCccccCCCCCceEEEEEeChHHHH-H-----------------HHHHhhhcCCCc
Q 009167 341 --Q--------KAL-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-Q-----------------IRNLHHVLGGAL 391 (541)
Q Consensus 341 --~--------~~~-~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-~-----------------l~~~~~~~G~~~ 391 (541)
. ... ..+.++++.|+||.++.+| ...|++++++++++ . +...........
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (437)
T 3g0t_A 233 YSHPGEPLYQPSVANYTDNYILALSSSKAFSYAG-QRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGA 311 (437)
T ss_dssp CCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGG-GCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSS
T ss_pred cCcccccchhhccCCCCCcEEEEEcCccCCCCcc-ceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCC
Confidence 1 111 2467799999999998554 35799999998888 6 655544434455
Q ss_pred hHHHHHHHHHhHHH-------HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC
Q 009167 392 NPNAAYLIIRGMKT-------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 392 s~~~a~l~l~~l~t-------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~ 464 (541)
++..++.+...++. +..+.++..++++.+.+.|+++ .+. +.+|.-...| ...|.++++.+++
T Consensus 312 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~---------~~~~~~~~~~~~~ 380 (437)
T 3g0t_A 312 THSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFN-IVYDKDGNEP---------LADGFYFTVGYKG 380 (437)
T ss_dssp CHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEE-ESSCEETTEE---------CCSSSEEEEEETT
T ss_pred CHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCE-EeccccCCCC---------CceeEEEEEecCC
Confidence 55555555555544 4455666677888888999876 432 2211000000 0146788999973
Q ss_pred CHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHh
Q 009167 465 DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV---EDFEDLKADVLQALH 539 (541)
Q Consensus 465 ~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~---e~~edli~dL~~AL~ 539 (541)
.....+.+.|...++.+..|..+.. ..++.+|||++. ++.+.+++.|.++++
T Consensus 381 --~~~~~l~~~L~~~gi~v~~~~~~~~---------------------~~~~~iRis~~~~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 381 --MDSSKLIEKFVRYGMCAITLKTTGS---------------------KRNEAMRICTSLLPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp --CCHHHHHHHHHHTTEECEESTTTTC---------------------CCTTCEEEECSSSCGGGHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHcCeEEeeccccCC---------------------CCCCEEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 2345666666656877776644211 013679999995 344555566655543
No 62
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.94 E-value=9.7e-26 Score=233.93 Aligned_cols=301 Identities=16% Similarity=0.161 Sum_probs=209.6
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC---
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
.++...++|++||+++|.+++++++||++|+.+++.++ +++||+|+++.++|+++... +...|.++.+++.+
T Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~ 111 (374)
T 3uwc_A 36 LGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIASVGA----IVQAGATPVLVDSENGY 111 (374)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHH----HHHTTCEEEEECBCTTS
T ss_pred cChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHH----HHHcCCEEEEEecCCCC
Confidence 57889999999999999999999999999999999999 99999999999999987643 44568888888765
Q ss_pred --CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccC--CcEEEECCc--c
Q 009167 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSAT--K 357 (541)
Q Consensus 284 --d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~g--aDivv~S~s--K 357 (541)
|++++++++++ ++++|+ |+||||.+.|+++|.++|+++|+++|+|++|+.+........+ .|+++.|+| |
T Consensus 112 ~~d~~~l~~~~~~-~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K 187 (374)
T 3uwc_A 112 VIDPEKIEAAITD-KTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLK 187 (374)
T ss_dssp SBCGGGTGGGCCT-TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSS
T ss_pred CcCHHHHHHhCCC-CceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCC
Confidence 89999999987 488887 8999999999999999999999999999998875433333333 799999977 9
Q ss_pred ccCCCCCceEEEEEeC-hHHHHHHHHHhhh------------cCCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 009167 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKIL 424 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~-~~li~~l~~~~~~------------~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L 424 (541)
++++++. +|+++.+ +++.+.++..... +...+.+..+.+.+..++.+....++..++++.+.+.|
T Consensus 188 ~l~~~g~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l 265 (374)
T 3uwc_A 188 NLNVWSD--AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSF 265 (374)
T ss_dssp SSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHT
T ss_pred cCCccce--eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9988663 7887765 4677776654321 11224556666655555666666777778888888888
Q ss_pred HhCCC-ceEEeCCCCCCCchhhhHhhhccCccc--EEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccc-
Q 009167 425 EAHPK-VKRVHYPGLKSHPEHHIATQQMTGFGG--VVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY- 500 (541)
Q Consensus 425 ~~~p~-v~~v~~P~l~s~p~~~l~~~~~~g~g~--~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~- 500 (541)
++.+. +. .|..+.. +... .+.+... ....+.+.|...++.++.|....+.+.|.....
T Consensus 266 ~~~~~~~~---~~~~~~~-----------~~~~~~~~~~~~~----~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~ 327 (374)
T 3uwc_A 266 VDLSEFID---VPVRREG-----------VYHVFHIYVLRVK----YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLG 327 (374)
T ss_dssp GGGTTTEE---CCCCCTT-----------EECCCSSEEEEET----THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGC
T ss_pred ccCCCeEE---eccCCCC-----------CceeeEEEEEEcC----CHHHHHHHHHHCCCccccCCCCccccChhhhhcC
Confidence 87665 42 2221110 0111 2334333 234566666666777777643333333321110
Q ss_pred ---cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 501 ---WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 501 ---~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..++.... +.++.|||+++...+++.++.+.++|++
T Consensus 328 ~~~~~~~~~~~----~~~~~lrl~~~~~~t~edi~~~~~~l~~ 366 (374)
T 3uwc_A 328 YQQGDFPMAEK----HGEAVITLPAHPYLTEEEINYIIKKVRE 366 (374)
T ss_dssp CCTTSCHHHHH----HHHHEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CccCCCccHHH----HHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 01111110 1236899999987777666766666653
No 63
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.94 E-value=4.5e-25 Score=230.80 Aligned_cols=289 Identities=16% Similarity=0.149 Sum_probs=202.8
Q ss_pred CCccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccC----------CCEEEEcCCCCcchHHHHHhhc
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA----------GGHIVTTTDCYRKTRIFIETVL 270 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~p----------Gd~Vlv~~~~y~~~~~~~~~~l 270 (541)
.+.+..+.++..++++++|++++|.+.+++++||++|+.+++..+..+ ||+|++..++|++.........
T Consensus 69 ~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 148 (392)
T 3ruy_A 69 TLTSRAFHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMS 148 (392)
T ss_dssp SCCCTTSEETTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTC
T ss_pred cccccccCCHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhcc
Confidence 344555778999999999999999888999999999999999877644 6899999999987543332211
Q ss_pred cc---------CCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCC
Q 009167 271 PK---------MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 271 ~~---------~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~ 337 (541)
.. ....+..++.+|+++|++++++ ++++|++++|+||||.++| +++|.++|++||++||+||+|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~ 227 (392)
T 3ruy_A 149 SNEEYKRGFGPMLPGIIVIPYGDLEALKAAITP-NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTG 227 (392)
T ss_dssp SCTTTTTTCCSCCSSEEEECTTCHHHHHHHCCT-TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTT
T ss_pred CChhhccccCCCCCCCeeeCcccHHHHHHHhcc-CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhC
Confidence 11 1123556677799999999986 5999999999999999998 99999999999999999999853
Q ss_pred C------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--HH
Q 009167 338 P------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LR 409 (541)
Q Consensus 338 ~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~--~r 409 (541)
. ..........|+++ +||.++| |...+|++++++++++.+...........++..+..+...++.+. ..
T Consensus 228 ~~~~g~~~~~~~~~~~~d~~~--~SK~l~g-G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 304 (392)
T 3ruy_A 228 LGRTGKVFACDWDNVTPDMYI--LGKALGG-GVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKL 304 (392)
T ss_dssp TTTTSSSSGGGGGTCCCSEEE--ECGGGGT-TTSCCEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTH
T ss_pred CCccccchhhhccCCCCCEEE--EchhhhC-ChhhhEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 2 11222234567775 5699987 323579999999888776654443444556776666666666543 33
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcc
Q 009167 410 VQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 489 (541)
Q Consensus 410 ~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~ 489 (541)
.++..++++++.+.|++... |.+. ...+.|+++++.+++ ...++.+.|...++.++.|+
T Consensus 305 ~~~~~~~~~~l~~~L~~~~~------~~~~----------~~~~~g~~~~~~~~~---~~~~l~~~l~~~gi~v~~~~-- 363 (392)
T 3ruy_A 305 TERSLQLGEKLVGQLKEIDN------PMIT----------EVRGKGLFIGIELNE---PARPYCEQLKAAGLLCKETH-- 363 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCC------TTEE----------EEEEETTEEEEEESS---CSHHHHHHHHTTTEECCCBT--
T ss_pred HHHHHHHHHHHHHHHHHhcC------CCce----------EEEeeeeEEEEEEcc---hHHHHHHHHHHCCcEEecCC--
Confidence 44555667777777766421 1110 112357889999874 34566677766677665431
Q ss_pred cccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
++.|||+++...+++.++.+.++|+
T Consensus 364 -------------------------~~~iRi~~~~~~~~~~i~~~~~~l~ 388 (392)
T 3ruy_A 364 -------------------------ENVIRIAPPLVISEEDLEWAFQKIK 388 (392)
T ss_dssp -------------------------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred -------------------------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 4689999776655555555555554
No 64
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.94 E-value=8.6e-25 Score=223.29 Aligned_cols=274 Identities=16% Similarity=0.176 Sum_probs=191.6
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC-cEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSG-s~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
+.+|+++...+||++||+++|.+ +.+++++| ++++.+++..+ +||+|+++.|+|.+.. ..++..|+++..++
T Consensus 45 ~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~ 118 (337)
T 3p1t_A 45 INRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYR----ARIAVSGLRHFEIG 118 (337)
T ss_dssp TTSCCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHH----HHHTTSCCEEEEEC
T ss_pred hccCCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHH----HHHHHcCCEEEEec
Confidence 45677889999999999999984 34555555 58999998887 9999999999999855 34556788888886
Q ss_pred CC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc---cccccCCcEEEE
Q 009167 282 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KALSLGADLVLH 353 (541)
Q Consensus 282 ~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~---~~~~~gaDivv~ 353 (541)
.+ |+++|+++ . ++++|++++|+||||.++|+++|.++|+++++ +|+|++|...... .....+.++++.
T Consensus 119 ~~~~~~~d~~~l~~~--~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~ 194 (337)
T 3p1t_A 119 LTDDLLLDPNDLAQV--S-RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFR 194 (337)
T ss_dssp BCTTSSBCHHHHTTC--C-TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEE
T ss_pred CCCCCCCCHHHHHhh--c-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEe
Confidence 43 78888876 2 48999999999999999999999999999997 5669998743221 112235689999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 009167 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAKILEAHPKV 430 (541)
Q Consensus 354 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~r~~~~~~~a~~la~~L~~~p~v 430 (541)
|+||.+|.+| ...|++++++++++.++.....++ .++.....+...+ +.+..++++..++++.+.+.|+++ .+
T Consensus 195 S~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 270 (337)
T 3p1t_A 195 SFSKSYGLAG-LRLGALFGPSELIAAMKRKQWFCN--VGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GY 270 (337)
T ss_dssp ESSSTTCCTT-TCCEEEECCHHHHHHHHTTSCTTC--SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred eCchhccCcc-hheEEEEeCHHHHHHHHhhcCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cC
Confidence 9999997554 347899999999988876543332 3333333332333 345556666677788888888876 32
Q ss_pred eEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHh
Q 009167 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 510 (541)
Q Consensus 431 ~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~ 510 (541)
. + +| ..|+++++.++.. + .+.+.|+..++.++.|..+.
T Consensus 271 ~-~-~~----------------~~~~~~~~~~~~~-~---~~~~~l~~~gi~v~~g~~~~-------------------- 308 (337)
T 3p1t_A 271 R-V-AS----------------SEANFVLVENAAG-E---RTLRFLRERGIQVKDAGQFG-------------------- 308 (337)
T ss_dssp C-B-CC----------------CSSSEEEEECTTT-H---HHHHHHHHTTEECEEGGGGT--------------------
T ss_pred E-E-CC----------------CCCeEEEEEcCCH-H---HHHHHHHHCCeEEEECccCC--------------------
Confidence 1 1 11 1467888887643 2 33444555578877775431
Q ss_pred cCCCCCeEEEEecC-CCHHHHHHHHHH
Q 009167 511 YGIMDNLVRFSFGV-EDFEDLKADVLQ 536 (541)
Q Consensus 511 ~gi~~~~IRlSvG~-e~~edli~dL~~ 536 (541)
.++.||||++. ++.+.+++.|.+
T Consensus 309 ---~~~~iRis~~~~~~~~~l~~al~~ 332 (337)
T 3p1t_A 309 ---LHHHIRISIGREEDNDRLLAALAE 332 (337)
T ss_dssp ---CCSEEEEECCCHHHHHHHHHHHHH
T ss_pred ---CCCeEEEecCCHHHHHHHHHHHHH
Confidence 14789999994 233444444443
No 65
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.94 E-value=1.7e-24 Score=225.53 Aligned_cols=271 Identities=16% Similarity=0.152 Sum_probs=194.0
Q ss_pred CCCch-hHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 206 RYGNP-TTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 206 R~~~p-~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
+|+.+ ...+|+++|+++++.+ +++++++|++|+.+++.+++++||+|+++.++|++.... ++..|.++..++.
T Consensus 56 ~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~ 131 (381)
T 1v2d_A 56 QYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPD----AFLAGAKARLVRL 131 (381)
T ss_dssp SCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHcCCEEEEEeC
Confidence 34443 5779999999999873 678888888999999999999999999999999986543 3445777777654
Q ss_pred --------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc----cccc--c
Q 009167 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL--S 345 (541)
Q Consensus 283 --------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~----~~~~--~ 345 (541)
.|+++|++++++ ++++|++++|+||||.++| +++|.++|+++|+++|+|++|..... .... .
T Consensus 132 ~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~ 210 (381)
T 1v2d_A 132 DLTPEGFRLDLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFA 210 (381)
T ss_dssp EEETTEEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHC
T ss_pred CCCCccCCcCHHHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhc
Confidence 379999999976 4999999999999999987 78999999999999999999875432 1122 3
Q ss_pred cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH------HHHHHHHHHHHHHH
Q 009167 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTALR 419 (541)
Q Consensus 346 ~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t------l~~r~~~~~~~a~~ 419 (541)
.+.|+++.|+||+++.+| ...|++++++++++.++........+.++...+.+...++. +....++..++++.
T Consensus 211 ~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 289 (381)
T 1v2d_A 211 PERTFTVGSAGKRLEATG-YRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDL 289 (381)
T ss_dssp TTTEEEEEEHHHHTTCGG-GCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH
Confidence 478999999999997554 45799999998888887655443444455444444444442 23344555677778
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcccc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
+.+.|++. ++. +..|. .|.++++.+++. + +...+...++.+..|..+.. .
T Consensus 290 l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~-~----~~~~l~~~gi~v~~g~~~~~---~---- 339 (381)
T 1v2d_A 290 LAGGLRAM-GLR-VYVPE----------------GTYFLMAELPGW-D----AFRLVEEARVALIPASAFYL---E---- 339 (381)
T ss_dssp HHHHHHHT-TCC-EECCS----------------BSSEEEEECTTC-C----HHHHHHHTCEECEEGGGGCS---S----
T ss_pred HHHHHHHC-CCE-ecCCC----------------cceEEEEecChH-h----HHHHHHhCCEEEecchHhCC---C----
Confidence 88888773 332 22121 356888988753 2 33344445777766644321 0
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecC
Q 009167 500 YWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
...++.+|||++.
T Consensus 340 ------------~~~~~~iRi~~~~ 352 (381)
T 1v2d_A 340 ------------DPPKDLFRFAFCK 352 (381)
T ss_dssp ------------SCCTTEEEEECCS
T ss_pred ------------CCCCCEEEEEeCC
Confidence 0135789999997
No 66
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.94 E-value=3e-25 Score=228.61 Aligned_cols=282 Identities=10% Similarity=0.078 Sum_probs=203.7
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
+.+|+++...+||++||+++|.+ +++++++|++|+.+++.++. ||+|+++.|+|.+... .++..|.++..++
T Consensus 44 ~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~----~~~~~g~~~~~v~ 117 (350)
T 3fkd_A 44 IRHYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYED----ACRMYEHEVCFYP 117 (350)
T ss_dssp GGSCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT--TCEEEEEESCCHHHHH----HHHHTTCEEEEEE
T ss_pred HhcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHH----HHHHcCCeEEEEe
Confidence 45566666689999999999974 56667777799999999887 9999999999998653 3445688998888
Q ss_pred C-CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC-CEEEEeCCCCCCCccc------ccccCCcEEEE
Q 009167 282 P-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCIDGTFATPLNQK------ALSLGADLVLH 353 (541)
Q Consensus 282 ~-~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g-i~lIvDea~a~~~~~~------~~~~gaDivv~ 353 (541)
. ++.+.+.- + ++++|++++|+||||.++|+++|.++++.++ .+||+|++|....... ....+.++++.
T Consensus 118 ~~~~~~~~~~---~-~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (350)
T 3fkd_A 118 SNEDIGEADF---S-NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVY 193 (350)
T ss_dssp TTSCGGGSCC---T-TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEE
T ss_pred cCCccccCcc---C-CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEe
Confidence 7 44333321 3 5899999999999999999999999998875 7999999987533211 11235669999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCCc
Q 009167 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAKILEAHPKV 430 (541)
Q Consensus 354 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl---~~r~~~~~~~a~~la~~L~~~p~v 430 (541)
|+||.++.+| ..+|++++++++++.++.....+ ..++..++++...++.. ..++++..++++.+.+.|+++|.+
T Consensus 194 S~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 270 (350)
T 3fkd_A 194 SFSHAYGIPG-LRIGYIVANKDFMKRVAAFSTPW--AVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGV 270 (350)
T ss_dssp ESHHHHSCGG-GCCEEEECCHHHHHHHHTTCCTT--CSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTE
T ss_pred cCchhccCcc-hheEeEEeCHHHHHHHHHhCCCC--CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999998554 35789999999999887765433 34566655555555542 244555557888899999888766
Q ss_pred eEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccC-cCeecccCCcccccccCccccccCCCHHHHH
Q 009167 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 431 ~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~-~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
.. +|. .|+++++.++.. ...++.+.|.. .++.++.|..+.
T Consensus 271 ~~--~~~----------------~~~~~~~~~~~~--~~~~l~~~L~~~~gi~v~~g~~f~------------------- 311 (350)
T 3fkd_A 271 EV--HPS----------------GTTFFLLRLKKG--TAAELKKYMLEEYNMLIRDASNFR------------------- 311 (350)
T ss_dssp EE--CCC----------------SSSEEEEEESSS--CHHHHHHHHHHTTCEECEECTTST-------------------
T ss_pred EE--CCC----------------CCcEEEEECCCC--CHHHHHHHHHHHCCEEEEeCccCC-------------------
Confidence 42 232 467888999753 45677777766 788888876542
Q ss_pred hcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009167 510 KYGIMDNLVRFSFGVE-DFEDLKADVLQALH 539 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~e-~~edli~dL~~AL~ 539 (541)
+..+++||||++.+ +.+++++.|++.++
T Consensus 312 --~~~~~~iRis~~~~~~~~~l~~al~~~~~ 340 (350)
T 3fkd_A 312 --GLDESYVRITTQRPAQNQLFIKALETFLE 340 (350)
T ss_dssp --TCCTTEEEEECCCHHHHHHHHHHHHHHHT
T ss_pred --CCCCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 12367999999953 33456666655543
No 67
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.94 E-value=2e-25 Score=230.29 Aligned_cols=255 Identities=15% Similarity=0.134 Sum_probs=185.7
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd--~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
++...+|+++||+++|.+..+++++|++|+.+++.+++.+|| .|+++.+.|...+... ......|+++..++.
T Consensus 46 ~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 124 (357)
T 3lws_A 46 GAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQD-GLKELHPIETILVGAADRL 124 (357)
T ss_dssp ETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTT-HHHHHSSCEEEECSCTTSC
T ss_pred ChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccc-hhhhccCcEEEEecCCCCC
Confidence 578999999999999998889999999999999999999998 6777766655432210 012234788877764
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCC-Ccccc---HHHHHHHHHhCCCEEEEeCCCCC------CCcccccccCCcEEE
Q 009167 283 ADMEGLEAALNNNNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGADLVL 352 (541)
Q Consensus 283 ~d~e~Le~al~~~~tklV~lesP~NPt-G~i~d---l~~Ia~la~~~gi~lIvDea~a~------~~~~~~~~~gaDivv 352 (541)
.|+++|+++. + +++|++++|+||+ |.+++ +++|+++|++||++||+|++|.. +.....+..+.|+++
T Consensus 125 ~d~~~l~~~~--~-~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~ 201 (357)
T 3lws_A 125 MTLDEIKALP--D-IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIY 201 (357)
T ss_dssp CCHHHHHTCC--S-CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEE
T ss_pred cCHHHHhcCc--C-cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEE
Confidence 3789998873 3 8999999999998 99886 88999999999999999999751 111222234578999
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc--hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 009167 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKV 430 (541)
Q Consensus 353 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~--s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v 430 (541)
.|+||+++++. +|++++++++++.++.....++..+ ....+..+...++....++++..++++++.+.|+++|++
T Consensus 202 ~s~sK~~~~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~ 278 (357)
T 3lws_A 202 ISFYKGLGGIA---GAILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYELRKDRMGQYYEQAKQLAEQFNALPGV 278 (357)
T ss_dssp EESSSTTCCSS---CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTE
T ss_pred EeccccCCCCc---eEEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999996654 5999999999998887665554322 122223333456655556666677888999999988776
Q ss_pred eEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-HHHHHHHHHccCcCeecccC
Q 009167 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 431 ~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-~~~~~~l~~L~~~~iavS~G 486 (541)
.....|. .++++++.++... .....+.+.|...++.+..|
T Consensus 279 ~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g 319 (357)
T 3lws_A 279 HTTPEVP----------------VSNMFHLHFDGQAADISPKLEQVQEETGLGFVGY 319 (357)
T ss_dssp EEESSSC----------------SSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSC
T ss_pred eeccCCC----------------cceEEEEEecCChHHHHHHHHHHHHhcCeEEecc
Confidence 4323332 4678999997642 23566677777678877766
No 68
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.94 E-value=3.6e-25 Score=231.46 Aligned_cols=282 Identities=15% Similarity=0.115 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC
Q 009167 212 TVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (541)
Q Consensus 212 ~~~Le~~LA~l~g--------~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~ 283 (541)
..+++++|+++++ .++++++++|++|+.+++.+++++||+|+++.++|.+.... ++..|.++..++.+
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~~~ 145 (391)
T 3h14_A 70 LPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQI----LRALGLVPVDLPTA 145 (391)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHHTTCEEEEEECC
T ss_pred hHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHH----HHHcCCEEEEeecC
Confidence 5678888888763 25688888888999999999999999999999999986643 44568888777643
Q ss_pred -------CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc----ccccc-cCC
Q 009167 284 -------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALS-LGA 348 (541)
Q Consensus 284 -------d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~----~~~~~-~ga 348 (541)
|+++|+++ ++++|++++|+||||.++| +++|+++|+++|+++|+|++|+.... ..... .+.
T Consensus 146 ~~~~~~~d~~~l~~~----~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 221 (391)
T 3h14_A 146 PENRLQPVPADFAGL----DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDE 221 (391)
T ss_dssp GGGTTSCCHHHHTTS----CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSS
T ss_pred cccCCCCCHHHHHhc----CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCC
Confidence 77887766 3899999999999999998 77899999999999999999875331 12222 246
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR---GMKTLHLRVQQQNSTALRMAKILE 425 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~---~l~tl~~r~~~~~~~a~~la~~L~ 425 (541)
++++.|+||.+|.+| ...|++++++++++.++......+...++..++.+.. ..+.+..+.++..++++.+.+.|+
T Consensus 222 ~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 300 (391)
T 3h14_A 222 CYVINSFSKYFSMTG-WRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLP 300 (391)
T ss_dssp SEEEEESSSTTCCTT-SCCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEechhccCCcc-ceeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999997555 4579999999999988877666655556555444333 334455566667778888888888
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccC-cCeecccCCcccccccCccccccCCC
Q 009167 426 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPAIMSYWDLS 504 (541)
Q Consensus 426 ~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~-~~iavS~G~~~sl~~~pa~~~~~~~~ 504 (541)
+++.+. +..|. .+.++++.++........+.+.|.. .++.++.|..+..
T Consensus 301 ~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~------------- 350 (391)
T 3h14_A 301 KAGFTR-IAPPD----------------GAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDP------------- 350 (391)
T ss_dssp HHTCCC-BCCCC----------------BTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCT-------------
T ss_pred HcCCCc-ccCCC----------------eeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCC-------------
Confidence 764321 11111 3457788886311234455555433 4788877755321
Q ss_pred HHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009167 505 QSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 505 ~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~ 539 (541)
+..++.||||++.. +.++.++.|.++++
T Consensus 351 -------~~~~~~iRis~~~~~~~i~~~l~~l~~~~~ 380 (391)
T 3h14_A 351 -------ERGAGTLRFSYARATADIEEGLDRLEAFMQ 380 (391)
T ss_dssp -------TTGGGEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred -------CCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 01257899999982 22333444444444
No 69
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.94 E-value=1.4e-24 Score=227.38 Aligned_cols=285 Identities=12% Similarity=0.033 Sum_probs=196.9
Q ss_pred HHHHHHHHHHHh----C--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-
Q 009167 212 TVVVEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (541)
Q Consensus 212 ~~~Le~~LA~l~----g--~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~- 282 (541)
..++++++|+++ | . +.++++++|++|+.+++.+++++||+|+++.++|++.... +...|.++..++.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~ 143 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMA----IKNQERKIIECELL 143 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHH----HHTTTCEEEECCCE
T ss_pred cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHH----HHHcCCEEEecccc
Confidence 667888888874 5 2 4677777888999999999999999999999999986643 3445777777654
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc-----ccccc--
Q 009167 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALS-- 345 (541)
Q Consensus 283 -------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~-----~~~~~-- 345 (541)
.|+++|++++++.++++|++++|+||||.++| +++|+++|+++|++||+|++|..... .....
T Consensus 144 ~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 223 (399)
T 1c7n_A 144 EKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSID 223 (399)
T ss_dssp EETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSC
T ss_pred cCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcC
Confidence 47999999997335999999999999999999 88999999999999999999875321 11111
Q ss_pred ---cCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCC-CchHHHHHHHHHhHH----HHHHHHHHHHHH
Q 009167 346 ---LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG-ALNPNAAYLIIRGMK----TLHLRVQQQNST 416 (541)
Q Consensus 346 ---~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~-~~s~~~a~l~l~~l~----tl~~r~~~~~~~ 416 (541)
.+.++++.|+||.++.+| ...|+++++ +++++.++.....++. ..++..++.+...++ .+....++..++
T Consensus 224 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 302 (399)
T 1c7n_A 224 EQLADKTITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKN 302 (399)
T ss_dssp HHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ccccCcEEEEEeChhhccccc-hheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 356799999999998554 346888886 5788888776555432 345555544444443 244444556677
Q ss_pred HHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCccccccc
Q 009167 417 ALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQ 494 (541)
Q Consensus 417 a~~la~~L~~-~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~ 494 (541)
++.+.+.|++ +|.+.. ..|. .+.+++++++........+.+.|. ..++.+..|..+..
T Consensus 303 ~~~l~~~L~~~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--- 362 (399)
T 1c7n_A 303 QRIVKDFFEVNHPEIKA-PLIE----------------GTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGD--- 362 (399)
T ss_dssp HHHHHHHHHHHCTTSBC-CCCS----------------BSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCG---
T ss_pred HHHHHHHHHhhCCCCeE-ecCC----------------ceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCC---
Confidence 8888888887 565531 1110 234567888631012456667764 56777776654321
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009167 495 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~ 539 (541)
..++.||||++.. +.++.++.|.++++
T Consensus 363 ------------------~~~~~iRis~~~~~~~l~~~l~~l~~~l~ 391 (399)
T 1c7n_A 363 ------------------GGIGFERINLAAPSSVIQESLERLNKALK 391 (399)
T ss_dssp ------------------GGTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCCeEEEEeccCHHHHHHHHHHHHHHHH
Confidence 0257899999975 22333444445444
No 70
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.94 E-value=7.5e-25 Score=232.76 Aligned_cols=284 Identities=13% Similarity=0.115 Sum_probs=197.2
Q ss_pred chhHHHHHHHHHHHhC-------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 209 NPTTVVVEEKMSALEG-------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g-------~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
.+...++++++|++++ .++++++++|++|+.+++..++++||+|+++.|+|.+... .+...|+++..++
T Consensus 95 ~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~ 170 (427)
T 3dyd_A 95 SIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKT----LAESMGIEVKLYN 170 (427)
T ss_dssp TTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH----HHHHTTCEEEEEE
T ss_pred CCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCEEEEEe
Confidence 4567899999999998 2567888888999999999999999999999999988553 3445677777664
Q ss_pred C-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc-----cccccc
Q 009167 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL 346 (541)
Q Consensus 282 ~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~-----~~~~~~ 346 (541)
. .|+++|++++++ ++++|++++|+||||.++| +++|+++|+++|+++|+|++|..... ......
T Consensus 171 ~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~ 249 (427)
T 3dyd_A 171 LLPEKSWEIDLKQLEYLIDE-KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATL 249 (427)
T ss_dssp EEGGGTTEECHHHHHSSCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGG
T ss_pred cccccCCCCCHHHHHHHhcc-CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHh
Confidence 3 289999999987 4999999999999999999 99999999999999999999875321 111222
Q ss_pred CC---cEEEECCccccCCCCCceEEEEEeC-------hHHHHHHHHHhhhcCCCchHHHHHHHHHhHH-----HHHHHHH
Q 009167 347 GA---DLVLHSATKFIGGHNDVLAGSISGS-------GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQ 411 (541)
Q Consensus 347 ga---Divv~S~sK~lgg~gd~~gG~lv~~-------~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~-----tl~~r~~ 411 (541)
+. .+++.|+||.++.+| ...|+++++ +++++.+....... ...++..+..+...++ .+..+.+
T Consensus 250 ~~~~~vi~~~S~sK~~~~~G-~riG~~~~~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~a~~~~L~~~~~~~~~~~~~ 327 (427)
T 3dyd_A 250 STDVPILSCGGLAKRWLVPG-WRLGWILIHDRRDIFGNEIRDGLVKLSQRI-LGPCTIVQGALKSILCRTPGEFYHNTLS 327 (427)
T ss_dssp CSSCCEEEEEESTTTSSCGG-GCCEEEEEECSTTSSHHHHHHHHHHHHHHH-CCSCHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CCCCcEEEEeeccccCCCcC-cceEEEEecCcchhhHHHHHHHHHHHHhcc-CCCCHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 33 377899999987766 346777765 45666666543322 2334444444444443 3455666
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC----HHHHHHHHHHc-cCcCeecccC
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL-KIPYIAPSFG 486 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~----~~~~~~~l~~L-~~~~iavS~G 486 (541)
+..++++.+.+.|+++|.+. +..|. .|.++++.++.. ......+++.| +..++.+..|
T Consensus 328 ~~~~~~~~l~~~L~~~~g~~-~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g 390 (427)
T 3dyd_A 328 FLKSNADLCYGALAAIPGLR-PVRPS----------------GAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPA 390 (427)
T ss_dssp HHHHHHHHHHHHHHHSTTEE-EECCS----------------BTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHhcCCCce-ecCCC----------------eeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECC
Confidence 67778888999998887764 33332 456778887511 01234455555 3457777766
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009167 487 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 487 ~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~ 539 (541)
+.+. .++.+|||++.. +.++.++.|.++++
T Consensus 391 ~~~~-----------------------~~~~iRis~~~~~e~i~~~l~~l~~~l~ 422 (427)
T 3dyd_A 391 TCFE-----------------------YPNFIRVVITVPEVMMLEACSRIQEFCE 422 (427)
T ss_dssp GGGT-----------------------CTTEEEEESCSCHHHHHHHHHHHHHHHH
T ss_pred cccC-----------------------CCCeEEEEECCCHHHHHHHHHHHHHHHH
Confidence 5431 147899999842 23344445555444
No 71
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=6.6e-25 Score=229.86 Aligned_cols=264 Identities=18% Similarity=0.191 Sum_probs=189.8
Q ss_pred hHHHHHHHHHHHh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 211 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...++|+.||+++ |. ++++++++|++|+.+++.+++++||+|+++.++|++....+ +..|.++..++.
T Consensus 79 g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~ 154 (389)
T 1o4s_A 79 GIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQI----ILAGGTVNVVET 154 (389)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHcCCEEEEEec
Confidence 4678888888887 53 45777777789999999999999999999999999866433 445777777753
Q ss_pred C-------CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----cccc---
Q 009167 283 A-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS--- 345 (541)
Q Consensus 283 ~-------d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----~~~~--- 345 (541)
+ |+++|++++++ ++++|++++|+||||.++| +++|+++|+++|+++|+|++|+.+... ....
T Consensus 155 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~ 233 (389)
T 1o4s_A 155 FMSKNFQPSLEEVEGLLVG-KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSE 233 (389)
T ss_dssp CGGGTTCCCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCS
T ss_pred CCccCCCCCHHHHHHhccc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCC
Confidence 2 78999999987 4999999999999999988 889999999999999999998764321 1111
Q ss_pred -cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHH
Q 009167 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-LHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 346 -~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t-l~~r~~~~~~~a~~la~~ 423 (541)
.+.|+++.|+||+++.+| ..+|++++++++++.++..........++..++.+...++. +....++..++++.+.+.
T Consensus 234 ~~~~~i~~~s~sK~~~~~G-~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~ 312 (389)
T 1o4s_A 234 GFDRIVYINGFSKSHSMTG-WRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVER 312 (389)
T ss_dssp SSTTEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeechhhcCCcc-cceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 368999999999997554 45799999999988887765544444455555544444432 333445556777888888
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCcccccccCccccccC
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
|++. ++. +..| ..|.++++.++. ...++.+.|. ..++.+..|..+.
T Consensus 313 L~~~-g~~-~~~~----------------~~~~~~~~~~~~---~~~~l~~~l~~~~gi~v~~g~~f~------------ 359 (389)
T 1o4s_A 313 LKKM-GVK-FVEP----------------EGAFYLFFKVRG---DDVKFCERLLEEKKVALVPGSAFL------------ 359 (389)
T ss_dssp HHHT-TCC-CCCC----------------SBSSEEEEECSS---CHHHHHHHHHHHHCEECEEGGGGT------------
T ss_pred HHhc-CCe-eecC----------------CcceEEEEeCCC---CHHHHHHHHHHHCCEEEeCchhcC------------
Confidence 8875 321 1111 034577888751 2345556553 5577766654321
Q ss_pred CCHHHHHhcCCCCCeEEEEecC
Q 009167 503 LSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
.++.+|||++.
T Consensus 360 -----------~~~~~Ris~~~ 370 (389)
T 1o4s_A 360 -----------KPGFVRLSFAT 370 (389)
T ss_dssp -----------CTTEEEEECCS
T ss_pred -----------CCCeEEEEEeC
Confidence 13589999995
No 72
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.94 E-value=7.7e-25 Score=228.89 Aligned_cols=275 Identities=16% Similarity=0.119 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHh----C-----CC-cEEEeCCHHHHHHHHHHHhccCC-----CEEEEcCCCCcchHHHHHhhcccCCeE
Q 009167 212 TVVVEEKMSALE----G-----AE-STVIMASGMSASTVMLLALVPAG-----GHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 212 ~~~Le~~LA~l~----g-----~e-~~i~~sSGs~Ai~~al~all~pG-----d~Vlv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
..++++.+++++ | .+ +++++++|++|+.+++.+++++| |+|+++.++|++.... +...|.+
T Consensus 68 ~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~----~~~~g~~ 143 (396)
T 3jtx_A 68 LPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGA----TLLGGGE 143 (396)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHH----HHHTTCE
T ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHH----HHHcCCE
Confidence 456666666654 5 34 67777778899999999999997 7999999999886543 4456778
Q ss_pred EEEeCC------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHH---HHHHHHhCCCEEEEeCCCCCCCccc--c--
Q 009167 277 ATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKL---VSDLCHKKGAIVCIDGTFATPLNQK--A-- 343 (541)
Q Consensus 277 v~~vd~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~---Ia~la~~~gi~lIvDea~a~~~~~~--~-- 343 (541)
+..++. .|+++|++++++ ++++|++++|+||||.+++.++ |+++|++||+++|+||+|....... +
T Consensus 144 ~~~v~~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 222 (396)
T 3jtx_A 144 IHFANCPAPSFNPDWRSISEEVWK-RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLG 222 (396)
T ss_dssp EEEEECCTTTCCCCGGGSCHHHHH-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCC
T ss_pred EEEeecCCCCCccCHHHHHHhhcc-CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCch
Confidence 777764 278889888877 4999999999999999998664 8899999999999999987643211 1
Q ss_pred -c--------ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH---HHHHHHHH
Q 009167 344 -L--------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQ 411 (541)
Q Consensus 344 -~--------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l---~tl~~r~~ 411 (541)
. ..+.++++.|+||.++.+| ...|++++++++++.++......+...++..+..+...+ +.+....+
T Consensus 223 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 301 (396)
T 3jtx_A 223 CLQAAAQLGRSRQKLLMFTSLSKRSNVPG-LRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRR 301 (396)
T ss_dssp HHHHHHHTTCCCTTEEEEEESTTTSSCGG-GCCEEEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHhhhhhcccccCcEEEEeccccccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHH
Confidence 1 2567899999999887655 457899999999999887766666666666655555444 33444555
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCccc
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCES 490 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~s 490 (541)
+..++.+.+.+.|+++.. +..| ..|.++++.++.. ....+.+.| +..++.++.|..+.
T Consensus 302 ~~~~~~~~l~~~l~~~~~---~~~~----------------~~~~~~~~~~~~~--~~~~~~~~l~~~~gi~v~~g~~~~ 360 (396)
T 3jtx_A 302 LYQEKFERVIPILQQVFD---VKLP----------------DASFYIWLKVPDG--DDLAFARNLWQKAAIQVLPGRFLA 360 (396)
T ss_dssp HHHHHHHHHHHHHTTTSC---CCCC----------------SSSSEEEEECTTS--CHHHHHHHHHHHHCEECEEGGGGC
T ss_pred HHHHHHHHHHHHHHhcCC---ccCC----------------CeeEEEEEECCCC--CHHHHHHHHHHHCCEEEeCChHhC
Confidence 566677777777766411 1111 1466889998741 234455555 34578888886543
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009167 491 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 529 (541)
Q Consensus 491 l~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~ed 529 (541)
.-... .+..++.||||++. +.++
T Consensus 361 ~~~~~---------------~~~~~~~iRis~~~-~~~~ 383 (396)
T 3jtx_A 361 RDTEQ---------------GNPGEGYVRIALVA-DVAT 383 (396)
T ss_dssp CCCTT---------------CCTTTTEEEEECCS-CHHH
T ss_pred Ccccc---------------cCCCCCeEEEEEcC-CHHH
Confidence 21000 11236899999987 4443
No 73
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.94 E-value=4.2e-25 Score=233.08 Aligned_cols=290 Identities=14% Similarity=0.168 Sum_probs=199.4
Q ss_pred hHHHHHHHHHHHhC------C---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALEG------A---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g------~---e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...++++.|+++++ . ++++++++|++|+.+++.+++++||+|+++.++|++....+ ...|.++..++
T Consensus 68 g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~ 143 (422)
T 3fvs_A 68 GYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMT----MMAGGRPVFVS 143 (422)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHH----HHcCCEEEEEe
Confidence 34567777777664 2 35677777779999999999999999999999999865433 34577766664
Q ss_pred C-----------------CCHHHHHHhccCCCceEEEEeCCCCCCCccc---cHHHHHHHHHhCCCEEEEeCCCCCCCc-
Q 009167 282 P-----------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN- 340 (541)
Q Consensus 282 ~-----------------~d~e~Le~al~~~~tklV~lesP~NPtG~i~---dl~~Ia~la~~~gi~lIvDea~a~~~~- 340 (541)
. .|+++|++++++ ++++|++++|+||||.++ ++++|+++|+++|+++|+||+|+....
T Consensus 144 ~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 222 (422)
T 3fvs_A 144 LKPGPIQNGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYD 222 (422)
T ss_dssp CBCCCCCSSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT
T ss_pred cccccccccccccccCCCCCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccC
Confidence 2 388999999987 499999999999999999 488999999999999999999875321
Q ss_pred ----ccccc----cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH-------
Q 009167 341 ----QKALS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------- 405 (541)
Q Consensus 341 ----~~~~~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t------- 405 (541)
..... .+.++++.|+||.+|.+| ...|++++++++++.+...........++..++.+...++.
T Consensus 223 ~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 301 (422)
T 3fvs_A 223 GHQHISIASLPGMWERTLTIGSAGKTFSATG-WKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQ 301 (422)
T ss_dssp TCCCCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCCCChhhcccccCcEEEEecchhccCCcc-ceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccc
Confidence 11111 245699999999997554 45799999999998887766544444555555555555542
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHH------------H
Q 009167 406 ----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA------------T 469 (541)
Q Consensus 406 ----l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~------------~ 469 (541)
+....++..++++.+.+.|+++ ++. +..|. .|.++++.++..... .
T Consensus 302 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (422)
T 3fvs_A 302 PSSYFVQFPQAMQRCRDHMIRSLQSV-GLK-PIIPQ----------------GSYFLITDISDFKRKMPDLPGAVDEPYD 363 (422)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTT-TCE-EEBCS----------------BSSEEEEECHHHHHHCCCCCCCTTCCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHc-CCe-ecCCC----------------eeeEEEEechhhcccccccccccccccH
Confidence 3445566667888888888876 343 23332 466788887531000 2
Q ss_pred HHHHHH-ccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009167 470 IKFIDA-LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 540 (541)
Q Consensus 470 ~~~l~~-L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~~ 540 (541)
.++... ++..++.++.|+.+..- + .....++.||||++.. +.++.++.|.+++++
T Consensus 364 ~~~~~~ll~~~gv~v~~g~~f~~~--~--------------~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 364 RRFVKWMIKNKGLVAIPVSIFYSV--P--------------HQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp HHHHHHHHHHHCEECEEGGGGSCH--H--------------HHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCEEEeCcHHhcCC--c--------------CCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 344444 34457888877654220 0 0012368999999972 234445556666554
No 74
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.94 E-value=1.2e-24 Score=223.59 Aligned_cols=282 Identities=11% Similarity=0.041 Sum_probs=200.0
Q ss_pred hhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC---
Q 009167 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e---~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
+..+++++.+++++|.. ++++++||++|+.+++.+++++ +.+++..+.|. . .+...++..|++++.++.+
T Consensus 43 ~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~-~--~~~~~~~~~g~~~~~v~~~~~~ 118 (362)
T 3ffr_A 43 EVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFS-K--RFYEFAGELGREAYKEEAAFGK 118 (362)
T ss_dssp HHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHH-H--HHHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHH-H--HHHHHHHHhCCCeEEEecCCCC
Confidence 55788999999999872 4677778889999999999988 55555554554 1 1223455668888887643
Q ss_pred --CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC-CCEEEEeCCCCCCCcccccccCCcEEEECCccccC
Q 009167 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIG 360 (541)
Q Consensus 284 --d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~-gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lg 360 (541)
|+++|+ +++ ++++|++++|+||||.+.|+++|.++|++| |+++|+|++++.+........ +|+++.|+||+++
T Consensus 119 ~~d~~~l~--~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~-~d~~~~s~~K~~~ 194 (362)
T 3ffr_A 119 GFYPADIT--VPA-DAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTK-IDSVFFSVQKCFG 194 (362)
T ss_dssp CCCGGGCC--CCT-TCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTS-CSEEEEETTSTTC
T ss_pred CCCHHHHh--ccC-CccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChhH-CcEEEEecccccC
Confidence 788887 555 599999999999999999999999999999 999999999876542211222 8999999999999
Q ss_pred CCCCceEEEEEeChHHHHHHHHHhh---------------------hcCCCchHHHHHHHHHhHHH-----HHHHHHHHH
Q 009167 361 GHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKT-----LHLRVQQQN 414 (541)
Q Consensus 361 g~gd~~gG~lv~~~~li~~l~~~~~---------------------~~G~~~s~~~a~l~l~~l~t-----l~~r~~~~~ 414 (541)
++.+ +|+++.+++++++++.... ....+.+....+.+...++. +..+.++..
T Consensus 195 ~~~G--~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 272 (362)
T 3ffr_A 195 LPAG--LGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTE 272 (362)
T ss_dssp CCSC--CEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CCCc--eEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 4432 4788888888887775442 00223333333333233332 355667777
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCccccccc
Q 009167 415 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQ 494 (541)
Q Consensus 415 ~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~ 494 (541)
++++.+.+.|+++|++..+ .|. +. ...+.+++|.+++ ...++.+.|...++.++.|..+
T Consensus 273 ~~~~~l~~~L~~~~g~~~~-~~~----~~--------~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~g~~~----- 331 (362)
T 3ffr_A 273 EKAALINTYIESSKVFSFG-VED----AK--------LRSMTTIVANTTM---LPGEINKILEPFDMAVGAGYGS----- 331 (362)
T ss_dssp HHHHHHHHHHHHCSSEEES-SSC----GG--------GBCSSEEEEEESS---CHHHHHHHHGGGTEEEEECSGG-----
T ss_pred HHHHHHHHHHHHccCceec-cCC----hh--------hcCCceEEEecCC---CHHHHHHHHHHCCeEEecCccc-----
Confidence 8889999999988776422 211 11 1135689999975 4567788887778877765210
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 495 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..++.||||++..++++.++.+.++|++
T Consensus 332 ------------------~~~~~iRis~~~~~~~e~i~~l~~~l~~ 359 (362)
T 3ffr_A 332 ------------------KKETQIRIANFPAHSLEQVHKLVQTLKE 359 (362)
T ss_dssp ------------------GTTTEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ------------------cCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 1257899999998888888888888875
No 75
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.94 E-value=5.1e-25 Score=231.04 Aligned_cols=304 Identities=15% Similarity=0.155 Sum_probs=220.5
Q ss_pred chhHHHHHHHH-HHHhC-CCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC--
Q 009167 209 NPTTVVVEEKM-SALEG-AESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (541)
Q Consensus 209 ~p~~~~Le~~L-A~l~g-~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-- 283 (541)
.|...+||+++ |+++| .+++++++||++|+.+++.++ +++||+|+++.++|.++...+ ...|.++++++.+
T Consensus 35 ~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~~----~~~G~~~~~v~~~~~ 110 (377)
T 3ju7_A 35 GPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAA----IWCGLEPYFIDISID 110 (377)
T ss_dssp CHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHHH----HHTTCEEEEECBCTT
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCc
Confidence 48899999999 99999 788999999999999999998 899999999999999876443 4568888888743
Q ss_pred ----CHHHHHHhc-cCCC--ceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccccccc---CCcEEEE
Q 009167 284 ----DMEGLEAAL-NNNN--VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSL---GADLVLH 353 (541)
Q Consensus 284 ----d~e~Le~al-~~~~--tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~---gaDivv~ 353 (541)
|+++|++++ ++ + |++|+ |+||+|.+.|+++|.++|+ +|++||+|++++.+...+.... ..|+.++
T Consensus 111 ~~~~d~~~l~~~i~~~-~~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~ 185 (377)
T 3ju7_A 111 DWYMDKTVLWDKIEEL-KEEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIY 185 (377)
T ss_dssp TCSBCHHHHHHHHHHH-GGGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEE
T ss_pred cCCcCHHHHHHHHhcC-CCCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEE
Confidence 899999988 43 4 88887 6889999999999999999 9999999999876544333233 3688888
Q ss_pred CC--ccccCCCCCceEEEEEe-ChHHHHHHHHHhhh------------cCCCchHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 009167 354 SA--TKFIGGHNDVLAGSISG-SGKLVTQIRNLHHV------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTAL 418 (541)
Q Consensus 354 S~--sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~------------~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~ 418 (541)
|+ +|++++ + .||+++. ++++.++++..+.. ++..+++..+++++..++++..+++++.++++
T Consensus 186 S~~~~K~l~~-g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~ 262 (377)
T 3ju7_A 186 SFHATKPFGI-G--EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISE 262 (377)
T ss_dssp ECBTTSSSCC-B--SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ECCCCCcCCC-C--CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 75 699987 4 3677766 56777877765431 23457788888888899999999999999999
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
++.+.|++++.+.....|.-..+. ...++.+.+++. ...+.+++.|+..+|.++.+....+..+|...
T Consensus 263 ~~~~~L~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~ 330 (377)
T 3ju7_A 263 WYKQLLQSNGLMKKGWQLQKTEAV-----------IQQFMPILCPEE-VRNKQVIEDLKKQKIEARLYFSPSCHQQVLFR 330 (377)
T ss_dssp HHHHHHHHTTTTTTTCBCCCCSCB-----------CCSSEEEECCTT-SCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGT
T ss_pred HHHHHhcCCCCccccccCCCCCcc-----------eEEEEEEEeCCh-hhHHHHHHHHHHCCCceecccCCccccchhhh
Confidence 999999988754211111111111 112345555532 22567788888888888776422222233322
Q ss_pred cc--cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 499 SY--WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 499 ~~--~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+| ..++..+. +.++.|||+++...+++.++.+.++|.+
T Consensus 331 ~~~~~~~p~~~~----~~~~~l~lp~~~~~t~~di~~v~~~l~~ 370 (377)
T 3ju7_A 331 NYKSTDLTRTNK----IAKRIVSLPLWEGMTKEIVEQIVICLGQ 370 (377)
T ss_dssp TSCBSCCHHHHH----HHHHEEEECCCTTCCHHHHHHHHHHHTC
T ss_pred cCCCCCCHHHHH----HHhCEEECCCCCCCCHHHHHHHHHHHHH
Confidence 22 12222222 2356899999988888888888877764
No 76
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.94 E-value=7.7e-25 Score=229.93 Aligned_cols=294 Identities=16% Similarity=0.189 Sum_probs=200.6
Q ss_pred CCCCch-hHHHHHHHHHHHhC------C---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009167 205 GRYGNP-TTVVVEEKMSALEG------A---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~g------~---e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~G 274 (541)
.+|+.+ ...++++++|++++ . ++++++++|++|+.+++.+++++||+|+++.++|++....+ ...|
T Consensus 55 ~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~----~~~g 130 (410)
T 3e2y_A 55 NQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMV----RMAG 130 (410)
T ss_dssp GSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTT
T ss_pred cCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH----HHcC
Confidence 344443 35688888888875 2 45677777779999999999999999999999999866443 3456
Q ss_pred eEEEEeCC----------------CCHHHHHHhccCCCceEEEEeCCCCCCCccc---cHHHHHHHHHhCCCEEEEeCCC
Q 009167 275 ITATVIDP----------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 275 i~v~~vd~----------------~d~e~Le~al~~~~tklV~lesP~NPtG~i~---dl~~Ia~la~~~gi~lIvDea~ 335 (541)
.++..++. .|+++|++++++ ++++|++++|+||||.++ ++++|+++|++||+++|+|++|
T Consensus 131 ~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~ 209 (410)
T 3e2y_A 131 AVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVY 209 (410)
T ss_dssp CEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred CEEEEEeccccccccccccccCCcCCHHHHHhhcCC-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhh
Confidence 66666653 289999999987 599999999999999996 5889999999999999999998
Q ss_pred CCCCcc-----cccc----cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH-
Q 009167 336 ATPLNQ-----KALS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT- 405 (541)
Q Consensus 336 a~~~~~-----~~~~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t- 405 (541)
+..... .... .+.++++.|+||.+|.+| ...|++++++++++.++..........++..+..+...++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 288 (410)
T 3e2y_A 210 EWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTG-WKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWID 288 (410)
T ss_dssp TTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGG-GCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred hhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCC-ceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhh
Confidence 753211 1111 234599999999998555 45789999999999888766544445556555555555542
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC---H------
Q 009167 406 ----------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---L------ 466 (541)
Q Consensus 406 ----------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~---~------ 466 (541)
+....++..++++.+.+.|+++ .+. +..|. .|.++++.+... .
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 350 (410)
T 3e2y_A 289 IKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLK-PIVPD----------------GGYFIIADVSSLGADLSDMNSD 350 (410)
T ss_dssp HTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCE-EEBCS----------------BSSEEEEECGGGCCCCTTCCSS
T ss_pred hccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCC----------------ccEEEEEEchhhhccccccccc
Confidence 4445556667788888888876 342 22332 456788877530 0
Q ss_pred -HHHHHHHHH-ccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 467 -TATIKFIDA-LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 467 -~~~~~~l~~-L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.....+... ++..++.+..|+.+... + ... ..+++||||++. +++.++...+.|++
T Consensus 351 ~~~~~~~~~~ll~~~gv~v~~g~~f~~~--~--------~~~------~~~~~iRis~~~--~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 351 EPYDYKFVKWMTKHKKLTAIPVSAFCDS--K--------SKP------HFEKLVRFCFIK--KDSTLDAAEEIFRA 408 (410)
T ss_dssp CCHHHHHHHHHHHHHSEECEEGGGGSCT--T--------THH------HHTTEEEEECCC--CHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHcCEEEeCchhhCCC--C--------CCC------CCCCEEEEEEcC--CHHHHHHHHHHHHh
Confidence 011234433 34457888877654220 0 000 025799999997 44444555555544
No 77
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.93 E-value=5.9e-25 Score=230.78 Aligned_cols=289 Identities=11% Similarity=0.086 Sum_probs=200.0
Q ss_pred chhHHHHHHHHHHHhCCCc--EE-EeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC--
Q 009167 209 NPTTVVVEEKMSALEGAES--TV-IMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~--~i-~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-- 283 (541)
.+..+++++++++++|.+. .+ +++||++|+.+++.+++++||+|+++.+.|++.. +...++..|+++..++.+
T Consensus 43 ~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 120 (416)
T 3isl_A 43 TGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYL--LTEIAERYGANVHMLECEWG 120 (416)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHhcCCeeEEEecCCC
Confidence 5568899999999999743 44 5678889999999999999999999999998732 334556678888888754
Q ss_pred ---CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCcccc
Q 009167 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFI 359 (541)
Q Consensus 284 ---d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~sK~l 359 (541)
|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+. ..+....++|+++.|+||++
T Consensus 121 ~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l 200 (416)
T 3isl_A 121 TVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCL 200 (416)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTT
T ss_pred CCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCcccc
Confidence 89999999973248999999999999999999999999999999999999987543 23444568999999999985
Q ss_pred CCCCCceEEEEEeChHHHHHHHHHh--------------------------------------hhcCCCchHHHHHHHHH
Q 009167 360 GGHNDVLAGSISGSGKLVTQIRNLH--------------------------------------HVLGGALNPNAAYLIIR 401 (541)
Q Consensus 360 gg~gd~~gG~lv~~~~li~~l~~~~--------------------------------------~~~G~~~s~~~a~l~l~ 401 (541)
+++.+ .|+++.++++++.+.... ....++.+......+..
T Consensus 201 ~g~~g--~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 278 (416)
T 3isl_A 201 SVPSG--MAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALRE 278 (416)
T ss_dssp CCCSS--EEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHH
T ss_pred CCCCC--eEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHH
Confidence 54432 689999999888776321 00112233333322223
Q ss_pred hHHH-----HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc
Q 009167 402 GMKT-----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL 476 (541)
Q Consensus 402 ~l~t-----l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L 476 (541)
.++. +....++..++++++.+.|++. .+. +..|. . ...+++++|.++.+ ....++.+.|
T Consensus 279 al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-----~--------~~~~~~~~~~~~~~-~~~~~l~~~L 342 (416)
T 3isl_A 279 GVRLVLEEGLETRFERHRHHEAALAAGIKAM-GLR-LFGDD-----S--------CKMPVVTCVEIPGG-IDGESVRDML 342 (416)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BCSCG-----G--------GBCTTEEEEECCTT-CCHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCE-eccCc-----c--------ccCCcEEEEeCCCC-CCHHHHHHHH
Confidence 3332 3445566667788888888773 332 11110 0 11467899998632 2345666666
Q ss_pred cCc-CeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CC-HHHHHHHHHHHHhh
Q 009167 477 KIP-YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----ED-FEDLKADVLQALHA 540 (541)
Q Consensus 477 ~~~-~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~-~edli~dL~~AL~~ 540 (541)
... ++.++.|.. ...++.|||+++. ++ .+++++.|.+++++
T Consensus 343 ~~~~gi~v~~g~~-----------------------~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~ 389 (416)
T 3isl_A 343 LAQFGIEIASSFG-----------------------PLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLR 389 (416)
T ss_dssp HHHHCEECBCCCS-----------------------TTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred HHhCCEEEecCCC-----------------------CCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHH
Confidence 443 777776531 1235799999932 23 45556666665543
No 78
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.93 E-value=4.7e-24 Score=222.58 Aligned_cols=285 Identities=13% Similarity=0.082 Sum_probs=197.2
Q ss_pred hHHHHHHHHHHHh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----e-~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...++++++++++ |. + +++++++|++|+.+++.+++++||+|+++.++|++.... ++..|.++..++
T Consensus 68 g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~ 143 (386)
T 1u08_A 68 GVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPA----IALSGGIVKRMA 143 (386)
T ss_dssp CCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHH----HHHcCCEEEEee
Confidence 3567888888874 52 4 677788888999999999999999999999999986543 344577777765
Q ss_pred C------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc-------cccc-
Q 009167 282 P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-------QKAL- 344 (541)
Q Consensus 282 ~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~-------~~~~- 344 (541)
. .|+++|++++++ ++++|++++|+||||.++| +++|+++|+++|+++|+|++|..... ...+
T Consensus 144 ~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 222 (386)
T 1u08_A 144 LQPPHFRVDWQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHP 222 (386)
T ss_dssp CCTTTCCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSH
T ss_pred cCcccCcCCHHHHHHhhcc-cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhccc
Confidence 3 479999999976 5999999999999999996 67899999999999999999875321 1111
Q ss_pred -ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----HHHHHHHHHHHHHH
Q 009167 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALR 419 (541)
Q Consensus 345 -~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~a~~ 419 (541)
..+.|+++.|+||+++++| ...|++++++++++.++..........++..+..+...++. +....++..++++.
T Consensus 223 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 301 (386)
T 1u08_A 223 QLRERAVAVSSFGKTYHMTG-WKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDI 301 (386)
T ss_dssp HHHTTEEEEEEHHHHTTCGG-GCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHH
T ss_pred CccCcEEEEecchhhcCCcc-cceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 2478999999999998555 34699999999988887765433434444444444444443 33334455566777
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-HHHHHHHHHcc-CcCeecccCCcccccccCcc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALK-IPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~ 497 (541)
+.+.|+++ .+. +..|. .|.++++.+++.. ....++.+.|. ..++.+..|..+.. .
T Consensus 302 l~~~L~~~-g~~-~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~---~-- 358 (386)
T 1u08_A 302 LVNALNES-RLE-ILPCE----------------GTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCA---D-- 358 (386)
T ss_dssp HHHHTTSS-SCE-ECCCC----------------BSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCS---S--
T ss_pred HHHHHHHC-CCe-ecCCC----------------ceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCC---C--
Confidence 77777665 332 22121 3568899986420 12345555543 45777776644321 0
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 498 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
...++.+|||++. +++.++.+.+.|.+
T Consensus 359 --------------~~~~~~iRis~~~--~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 359 --------------PFPHKLIRLCFAK--KESTLLAAAERLRQ 385 (386)
T ss_dssp --------------CCCSCEEEEECCS--CHHHHHHHHHHHTT
T ss_pred --------------CCCCCEEEEEEcC--CHHHHHHHHHHHhh
Confidence 0135789999995 34555666666654
No 79
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.93 E-value=6.3e-25 Score=231.54 Aligned_cols=284 Identities=10% Similarity=0.064 Sum_probs=197.0
Q ss_pred hhHHHHHHHHHHHh----CC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 210 PTTVVVEEKMSALE----GA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g~-----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+...+++++||+++ |. +.++++++|++|+.+++.+++++||+|+++.++|++....+ ...|.++..+
T Consensus 85 ~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v 160 (404)
T 2o1b_A 85 HGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGV----LLADGKPVPL 160 (404)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHH----HHTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHCCCEEEEe
Confidence 34678889999887 75 35666667779999999999999999999999999976443 3457777666
Q ss_pred CC------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc----cccccc-
Q 009167 281 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALSL- 346 (541)
Q Consensus 281 d~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~----~~~~~~- 346 (541)
+. .|+++|++++++ ++++|++++|+||||.++| +++|+++|+++|++||+|++|..+.. ......
T Consensus 161 ~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 239 (404)
T 2o1b_A 161 NLEPPHYLPDWSKVDSQIID-KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASE 239 (404)
T ss_dssp ECCTTTCCCCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGST
T ss_pred ccCcccCcCCHHHHHHhhcc-CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcC
Confidence 53 367888888875 4899999999999999996 67899999999999999999876432 112222
Q ss_pred ---CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----HHHHHHHHHHHHHH
Q 009167 347 ---GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALR 419 (541)
Q Consensus 347 ---gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~a~~ 419 (541)
+.++++.|+||+++.+| ...|++++++++++.++..........++...+.+...++. +....++..++++.
T Consensus 240 ~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 318 (404)
T 2o1b_A 240 NGKDVAIEIYSLSKGYNMSG-FRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDR 318 (404)
T ss_dssp THHHHEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEecchhccCch-hheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 45799999999997554 35789999999999888766555455566555555555543 33444555677788
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCcccccccCccc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~ 498 (541)
+.+.|+++ .+. +..|. .|.++++.++.+ ....++.+.|. ..++.+..|..+..
T Consensus 319 l~~~L~~~-g~~-~~~~~----------------~g~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~f~~------- 372 (404)
T 2o1b_A 319 FEAMLAKA-DLP-FVHAK----------------GGIYVWLETPPG-YDSEQFEQFLVQEKSILVAPGKPFGE------- 372 (404)
T ss_dssp HHHHHHHT-TCC-EECCC----------------BSSEEEEECCTT-CCHHHHHHHHHHHHCEECEESGGGCG-------
T ss_pred HHHHHHhc-CCe-ecCCC----------------cceEEEEeCCCC-CCHHHHHHHHHHHCCEEEeCchhhCc-------
Confidence 88888876 332 22121 244688888632 12345555543 35777776654321
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~ 539 (541)
..++.+|||++.. +.++.++.|.++++
T Consensus 373 --------------~~~~~iRis~~~~~e~l~~~l~~l~~~l~ 401 (404)
T 2o1b_A 373 --------------NGNRYVRISLALDDQKLDEAAIRLTELAY 401 (404)
T ss_dssp --------------GGTTEEEEECCSCTTHHHHHHHHHHGGGG
T ss_pred --------------CCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 0257899999962 23344444444443
No 80
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.93 E-value=7.8e-25 Score=229.48 Aligned_cols=287 Identities=11% Similarity=0.059 Sum_probs=196.9
Q ss_pred hhHHHHHHHHHHHhCCC--c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC---
Q 009167 210 PTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e--~-~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
+..+++++++++++|.+ + .++++||++|+.+++.+++++||+|+++.++|++.. +...++..|+++..++.+
T Consensus 46 ~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 123 (411)
T 3nnk_A 46 HYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHL--LCEIARRCRAEVHTIEVPWGE 123 (411)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHH--HHHHHHHcCCeEEEEecCCCC
Confidence 45689999999999974 2 455667889999999999999999999999998732 224455678888887654
Q ss_pred --CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCccccC
Q 009167 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIG 360 (541)
Q Consensus 284 --d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~sK~lg 360 (541)
|+++|++++++.++++|++++|+||||.+.|+++|.++|++||+++|+|++++.+. ..+....++|+++.|+||+++
T Consensus 124 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~ 203 (411)
T 3nnk_A 124 VFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLG 203 (411)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTC
T ss_pred CCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccC
Confidence 89999999975249999999999999999999999999999999999999976543 234445689999999999855
Q ss_pred CCCCceEEEEEeChHHHHHHHHHh------------------------------------hhcCCCchHHHHHHHHHhHH
Q 009167 361 GHNDVLAGSISGSGKLVTQIRNLH------------------------------------HVLGGALNPNAAYLIIRGMK 404 (541)
Q Consensus 361 g~gd~~gG~lv~~~~li~~l~~~~------------------------------------~~~G~~~s~~~a~l~l~~l~ 404 (541)
++. ..|+++.++++++.++... ....++.+......+...++
T Consensus 204 ~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 281 (411)
T 3nnk_A 204 GPS--GTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECAR 281 (411)
T ss_dssp CCS--SEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHH
T ss_pred CCC--ceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHH
Confidence 443 2689999999988876532 00112233333322222332
Q ss_pred H-----HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccC-
Q 009167 405 T-----LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI- 478 (541)
Q Consensus 405 t-----l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~- 478 (541)
. +....++..++++++.+.|++. .+. +..| +. ...+++++|.++.+ .....+.+.|..
T Consensus 282 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-----~~--------~~~~~~~~~~~~~~-~~~~~l~~~l~~~ 345 (411)
T 3nnk_A 282 LILQEGLDYGIARHKLHGDALVKGIQAM-GLE-TFGD-----LK--------HKMNNVLGVVIPQG-INGDQARKLMLED 345 (411)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BCSC-----GG--------GBCSSEEEEECCTT-CCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCE-eCCC-----cc--------cccccEEEEECCCC-CCHHHHHHHHHHh
Confidence 2 3445556667788888888775 221 1111 00 12467899998632 123455555533
Q ss_pred cCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe-cCCCH----HHHHHHHHHHHh
Q 009167 479 PYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GVEDF----EDLKADVLQALH 539 (541)
Q Consensus 479 ~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv-G~e~~----edli~dL~~AL~ 539 (541)
.++.++.|.. ...++.|||++ +..++ +++++.|.++++
T Consensus 346 ~gi~v~~g~~-----------------------~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~ 388 (411)
T 3nnk_A 346 FGIEIGTSFG-----------------------PLHGKVWRIGTMGYNARKDCVMTTLSALEAVLN 388 (411)
T ss_dssp HSEEEEECCG-----------------------GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred cCeEEeCccC-----------------------CCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHH
Confidence 3666665411 01357999998 75543 444555555544
No 81
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.93 E-value=1.6e-25 Score=232.35 Aligned_cols=283 Identities=12% Similarity=0.095 Sum_probs=193.1
Q ss_pred HHHHHHHHHHhC------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-
Q 009167 213 VVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (541)
Q Consensus 213 ~~Le~~LA~l~g------~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~- 283 (541)
.+++++||++++ . ++++++++|++|+.+++.+++++||+|+++.++|++.... +...|.++..++.+
T Consensus 61 ~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~ 136 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHL----LSATQREGIFIDATG 136 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHH----HHHHTCCEEEEECTT
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHH----HHHcCCEEEEccCCC
Confidence 567777777765 2 5688888888999999999999999999999999986643 34457778777765
Q ss_pred --CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc-----cc----ccCCc
Q 009167 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-----AL----SLGAD 349 (541)
Q Consensus 284 --d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~-----~~----~~gaD 349 (541)
|+++|+++++++ +++|++++|+||||.++| +++|+++|++||+++|+|++|....... ++ ..+.+
T Consensus 137 ~~d~~~l~~~l~~~-~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 215 (377)
T 3fdb_A 137 GINLHDVEKGFQAG-ARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVC 215 (377)
T ss_dssp SCCHHHHHHHHHTT-CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHE
T ss_pred CCCHHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcE
Confidence 899999999874 899999999999999996 5577778999999999999987532111 11 12345
Q ss_pred EEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH
Q 009167 350 LVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAKIL 424 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~a~~la~~L 424 (541)
+++.|+||.+|.+| ...|+++. ++++++.++..........++..++.+...++. +..+.++..++++.+.+.|
T Consensus 216 i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 294 (377)
T 3fdb_A 216 ITITAPSKAWNIAG-LKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEI 294 (377)
T ss_dssp EEEECSTTTTTCGG-GCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeChHhccCcc-hhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999997555 34676654 788888887655444445556555554444443 4455566677888888888
Q ss_pred Hh-CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCcccccccCccccccC
Q 009167 425 EA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 425 ~~-~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
++ .|.+. +..|. .+.++++.++..... .++.+.+ +..++.+..|..+...
T Consensus 295 ~~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~-~~~~~~l~~~~gi~v~~g~~~~~~---------- 346 (377)
T 3fdb_A 295 PKRIPGAK-ITPMQ----------------ATYLMWIDFRDTTIE-GSPSEFFIEKAKVAMNDGAWFGED---------- 346 (377)
T ss_dssp HHHSTTCE-ECCCS----------------BCSEEEEECTTSCCC-SCHHHHHHHHHCEECEEGGGGCGG----------
T ss_pred HhhCCCce-EecCC----------------eeEEEEEECcccCCC-HHHHHHHHHhCCEEecCChhccCC----------
Confidence 87 56653 22221 244567888642001 2233333 2236777766543210
Q ss_pred CCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009167 503 LSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 540 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~~ 540 (541)
.++.+|||++.. +.++.++.|.+++++
T Consensus 347 -----------~~~~~Ris~~~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 347 -----------GTGFCRLNFATSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp -----------GTTEEEEECCSCHHHHHHHHHHHHHHHTT
T ss_pred -----------CCCEEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 257999999962 223345555555543
No 82
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.93 E-value=9.2e-25 Score=231.36 Aligned_cols=282 Identities=17% Similarity=0.131 Sum_probs=197.9
Q ss_pred CCCccCCCCchhHHHHHHHHHHHhCC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 200 ASFEYGRYGNPTTVVVEEKMSALEGA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 200 ~~~~Y~R~~~p~~~~Le~~LA~l~g~----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
..+.|+....+..+++++.+++.+|. +.++++++|++|+.+++..++++||+|++..+.|++....+ ...|.
T Consensus 90 ~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~----~~~g~ 165 (421)
T 3l8a_A 90 HIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTI----RLNDH 165 (421)
T ss_dssp CCSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHH----HHTTE
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHH----HHCCC
Confidence 35678777777788888888888872 45777777789999999999999999999999999866443 34577
Q ss_pred EEEEeCC--------CCHHHHHHhccCCCceEEEEeCCCCCCCccc---cHHHHHHHHHhCCCEEEEeCCCCCCCc----
Q 009167 276 TATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCV---DVKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (541)
Q Consensus 276 ~v~~vd~--------~d~e~Le~al~~~~tklV~lesP~NPtG~i~---dl~~Ia~la~~~gi~lIvDea~a~~~~---- 340 (541)
++..++. .|+++|++++++.++++|++++|+||+|.++ ++++|.++|++||++||+||+|.....
T Consensus 166 ~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~ 245 (421)
T 3l8a_A 166 RLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNT 245 (421)
T ss_dssp EEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC
T ss_pred EEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 7666653 3899999999722599999999999999984 588999999999999999999865321
Q ss_pred -ccccc-----cCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCC-CchHHHHHHHHHhHH----HHHH
Q 009167 341 -QKALS-----LGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG-ALNPNAAYLIIRGMK----TLHL 408 (541)
Q Consensus 341 -~~~~~-----~gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G~-~~s~~~a~l~l~~l~----tl~~ 408 (541)
..... .+.++++.|++|.++.+| ...|+++.+ +++++.+.......+. ..++..+..+...++ .+..
T Consensus 246 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~ 324 (421)
T 3l8a_A 246 HHSLNTLDASYKDFTIILSSATKTFNIAG-TKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEE 324 (421)
T ss_dssp CCCGGGSCTTGGGTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHH
T ss_pred CccHHHcCchhcCcEEEEEeChhhccCch-hheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHHHHH
Confidence 11111 245699999999998554 457888887 8888888765533332 345554444433333 2455
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCC
Q 009167 409 RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGG 487 (541)
Q Consensus 409 r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~ 487 (541)
..++..++.+.+.+.|+++|.+..+. |. .+.++|++++........+.+.| +..++.++.|.
T Consensus 325 ~~~~~~~~~~~l~~~L~~~~~i~~~~-~~----------------~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~ 387 (421)
T 3l8a_A 325 LKTVIEGNIKLVIKELEAKTKIKVME-PE----------------GTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGA 387 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCEEEC-CS----------------BSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGG
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEeC-CC----------------eeEEEEEeccccCCCHHHHHHHHHHhCCEEEECch
Confidence 55666678888888888776664332 21 23355688863111234555555 34578777775
Q ss_pred cccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009167 488 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 488 ~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
.+.. ..++.|||+++.
T Consensus 388 ~f~~---------------------~~~~~iRi~~~~ 403 (421)
T 3l8a_A 388 HFGK---------------------EGKYFARLNVAT 403 (421)
T ss_dssp GGCG---------------------GGTTEEEEECCS
T ss_pred hhCC---------------------CCCCEEEEEecC
Confidence 4321 125799999995
No 83
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.93 E-value=4.6e-25 Score=227.57 Aligned_cols=274 Identities=16% Similarity=0.123 Sum_probs=195.0
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCE--EEEcCCCCcchHHHHHhhcccCCeEEEEeCCC--
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~--Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-- 283 (541)
.++..++|+++|++++|.+..++++||++|+.+++.+++.+||+ |+++.+.|...+... ......|.++..++..
T Consensus 46 ~~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~ 124 (359)
T 3pj0_A 46 NGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQD-GLKELQQITPLLLGTANQ 124 (359)
T ss_dssp BSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTT-HHHHHHCCEEEECSCTTS
T ss_pred CCHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcc-hHHHhcCceEEecCCcCC
Confidence 46889999999999999988899999999999999999999987 555555543321100 0112247888877653
Q ss_pred --CHHHHHHhccCCCceEEEEeCCCCCC-CccccHHHH---HHHHHhCCCEEEEeCCCCCCC------cccccccCCcEE
Q 009167 284 --DMEGLEAALNNNNVSLFFTESPTNPF-LRCVDVKLV---SDLCHKKGAIVCIDGTFATPL------NQKALSLGADLV 351 (541)
Q Consensus 284 --d~e~Le~al~~~~tklV~lesP~NPt-G~i~dl~~I---a~la~~~gi~lIvDea~a~~~------~~~~~~~gaDiv 351 (541)
|+++|+++ .+ ++++|++++|+||+ |.++|.++| .++|++||++||+|+++.... ....+..+.|++
T Consensus 125 ~~d~~~l~~~-~~-~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~ 202 (359)
T 3pj0_A 125 LLTIDDIKSL-RE-PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSV 202 (359)
T ss_dssp CCCHHHHHTC-SS-CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEE
T ss_pred CcCHHHHHhc-cC-CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEE
Confidence 89999988 55 59999999999998 798886655 999999999999999865322 112233468999
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc---hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL---NPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~---s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p 428 (541)
+.|+||+++++. +|++++++++++.++.....++... +... ..+...++....++++..++++++.+.|+++|
T Consensus 203 ~~s~sK~~~~~~---gg~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~ 278 (359)
T 3pj0_A 203 YVSFYKGIGGIA---GAILAGNDDFVQEAKIWKRRYGGDLISLYPYI-LSADYYFEKRIGKMAEYFEAAKGLAERFNSCS 278 (359)
T ss_dssp EEESSSTTCCSS---CEEEEECHHHHHHHHHHHHHTTCCCSCCHHHH-HHHHHHHHHHGGGHHHHHHHHHHHHHHHHTST
T ss_pred EEeccccCCCcc---eEEEECCHHHHHHHHHHHHHhCCCcchhHHHH-HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCC
Confidence 999999998774 5889999999999887655444322 2222 22233555544566677788899999999887
Q ss_pred CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-HHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHH
Q 009167 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 507 (541)
Q Consensus 429 ~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~ 507 (541)
.+.....|. .++++++.++... .....+.+.|...++.+..|..+.. +
T Consensus 279 g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~---~------------ 327 (359)
T 3pj0_A 279 GVKTVPEVP----------------VSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKS---A------------ 327 (359)
T ss_dssp TEEEESSSC----------------SSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEE---T------------
T ss_pred CceeeccCC----------------cceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccC---C------------
Confidence 764332332 4678888887432 3456777777777888877743211 1
Q ss_pred HHhcCCCCCeEEEEecCC
Q 009167 508 RLKYGIMDNLVRFSFGVE 525 (541)
Q Consensus 508 ~~~~gi~~~~IRlSvG~e 525 (541)
..+++|++++..
T Consensus 328 ------~~~~~r~~i~~~ 339 (359)
T 3pj0_A 328 ------DVCAFEVSVGDA 339 (359)
T ss_dssp ------TEEEEEEECCTT
T ss_pred ------CceEEEEEecCc
Confidence 246899999854
No 84
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.93 E-value=1.7e-24 Score=232.10 Aligned_cols=287 Identities=15% Similarity=0.109 Sum_probs=199.1
Q ss_pred hhHHHHHHHHHHHh----CC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 210 PTTVVVEEKMSALE----GA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g~---e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
....+|+++|++++ |. ++++++++|++|+.+++.+++++||+|+++.|+|++....+ ...|.++..++.
T Consensus 118 ~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~ 193 (448)
T 3aow_A 118 KGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAF----NFYEPQYIQIPL 193 (448)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HTTCCEEEEEEE
T ss_pred CCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHH----HHcCCEEEEecc
Confidence 34678899999888 75 45666667779999999999999999999999999866443 445777776654
Q ss_pred ----CCHHHHHHhcc----C-CCceEEE-EeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc-----cccc
Q 009167 283 ----ADMEGLEAALN----N-NNVSLFF-TESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKAL 344 (541)
Q Consensus 283 ----~d~e~Le~al~----~-~~tklV~-lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~-----~~~~ 344 (541)
.|+++|+++++ + .++++|+ +++|+||||.+++ +++|.++|++||++||+||+|..... ....
T Consensus 194 ~~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~ 273 (448)
T 3aow_A 194 DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIK 273 (448)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTG
T ss_pred CCCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHH
Confidence 38999999887 4 2589985 6899999999998 45899999999999999999876432 1111
Q ss_pred c---cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH------HHHHHHHHHH
Q 009167 345 S---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNS 415 (541)
Q Consensus 345 ~---~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t------l~~r~~~~~~ 415 (541)
. .+.++++.|+||.++ +| ...|++++++++++.+...........++..+.++...++. +....+...+
T Consensus 274 ~~~~~~~vi~~~S~SK~~~-~G-lriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~ 351 (448)
T 3aow_A 274 ALDNEGRVIYLGTFSKILA-PG-FRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKP 351 (448)
T ss_dssp GGCTTSCEEEEEESTTTTC-GG-GCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEEccchhhcc-cc-ccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 2 256799999999998 44 46799999999998887655433333355544444444432 3333344446
Q ss_pred HHHHHHHHHHh-CC-CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccc
Q 009167 416 TALRMAKILEA-HP-KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVD 493 (541)
Q Consensus 416 ~a~~la~~L~~-~p-~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~ 493 (541)
+++.+.+.|++ .| .+. +..|. .|.++|+.++.+ ....++.+.|...++.+..|..+..
T Consensus 352 ~~~~l~~~L~~~~~~g~~-~~~p~----------------~g~~~~v~~~~~-~~~~~l~~~l~~~gV~v~pg~~f~~-- 411 (448)
T 3aow_A 352 RRDAMLEALEEFMPEGVK-WTKPE----------------GGMFIWVTLPDG-IDSKKMLERAIKKGVAYVPGEAFYA-- 411 (448)
T ss_dssp HHHHHHHHHHHHCCTTCE-ECCCS----------------BSSEEEEECSTT-CCHHHHHHHHHHTTEECEEGGGGST--
T ss_pred HHHHHHHHHHHhCCCCeE-EeCCC----------------ccEEEEEEcCCC-CCHHHHHHHHHHCCcEEEcchhhcC--
Confidence 77778888876 35 343 22231 467889999742 1244566666555887777754321
Q ss_pred cCccccccCCCHHHHHhcCCCCCeEEEEecCC---CHHHHHHHHHHHHh
Q 009167 494 QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE---DFEDLKADVLQALH 539 (541)
Q Consensus 494 ~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e---~~edli~dL~~AL~ 539 (541)
.+..++.+|||++.. +.++.++.|.++++
T Consensus 412 -----------------~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~ 443 (448)
T 3aow_A 412 -----------------HRDVKNTMRLNFTYVDEDKIMEGIKRLAETIK 443 (448)
T ss_dssp -----------------TCCCCSEEEEECSSSCTHHHHHHHHHHHHHHH
T ss_pred -----------------CCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 011357899999864 34555666666654
No 85
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.93 E-value=4.8e-25 Score=228.89 Aligned_cols=278 Identities=13% Similarity=0.058 Sum_probs=193.7
Q ss_pred chhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhccC-------------CCEEEEcCCCCcchHHHHHhhcccC
Q 009167 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPA-------------GGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~p-------------Gd~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
....+++++.+++++|.+ +.+++++|++|+.+++.++..+ ||+|+++.++|+++...+ ...
T Consensus 68 ~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~----~~~ 143 (397)
T 3f9t_A 68 KLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGR----EMM 143 (397)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHH----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHH----HHc
Confidence 445668899999999874 4578888899999999988776 999999999999866443 345
Q ss_pred CeEEEEeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc--------
Q 009167 274 GITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------- 340 (541)
Q Consensus 274 Gi~v~~vd~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-------- 340 (541)
|+++..++.+ |+++|++++++.++++|++++|+||||.+.|+++|.++|++||++||+|++|+.+..
T Consensus 144 g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~ 223 (397)
T 3f9t_A 144 DLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYK 223 (397)
T ss_dssp TCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGC
T ss_pred CceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccc
Confidence 8888888764 899999999762489999999999999999999999999999999999999874321
Q ss_pred -------ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhc---------CCC--chHHHHHHHHHh
Q 009167 341 -------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL---------GGA--LNPNAAYLIIRG 402 (541)
Q Consensus 341 -------~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~---------G~~--~s~~~a~l~l~~ 402 (541)
.+... ++|+++.|++|+++++.. +|++++.++.+.+.++.....+ |.. .+....+.++..
T Consensus 224 ~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 301 (397)
T 3f9t_A 224 KKGVNYKFDFSL-GVDSITIDPHKMGHCPIP-SGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRY 301 (397)
T ss_dssp CTTCCCCCSGGG-TCSEEECCTTTTTCCCSS-CEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHH
T ss_pred cccccccccccc-cCCeEEEccccccCCCCC-ceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHH
Confidence 11223 789999999999966542 3444444555554443211111 111 133444444433
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcC
Q 009167 403 M--KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 480 (541)
Q Consensus 403 l--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~ 480 (541)
+ ..+..+.++..++++++.+.|+++ .+..+ .| ..+++++|.++. ...+.+.|...+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~----------------~~~~~~~~~~~~----~~~~~~~l~~~g 359 (397)
T 3f9t_A 302 LGREGQRKIVNECMENTLYLYKKLKEN-NFKPV-IE----------------PILNIVAIEDED----YKEVCKKLRDRG 359 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SC----------------CSSSEEEEECTT----HHHHHHHHHHTT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-cC----------------CCccEEEEEeCC----HHHHHHHHHhCC
Confidence 3 334556667778888999999886 33211 12 136788888864 345555555556
Q ss_pred eecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 481 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 481 iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+.++.|. .++.|||+++...+++.++.+.++|++
T Consensus 360 i~v~~~~--------------------------~~~~~Ri~~~~~~~~e~i~~~~~~l~~ 393 (397)
T 3f9t_A 360 IYVSVCN--------------------------CVKALRIVVMPHIKREHIDNFIEILNS 393 (397)
T ss_dssp CBCEECS--------------------------SSSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred eEEeccC--------------------------CCCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 6555432 147899999976666666666666553
No 86
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.93 E-value=5e-24 Score=226.10 Aligned_cols=272 Identities=13% Similarity=0.107 Sum_probs=183.7
Q ss_pred EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----CCHHHHHHhccC---------
Q 009167 228 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNN--------- 294 (541)
Q Consensus 228 ~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----~d~e~Le~al~~--------- 294 (541)
+++++++++|+.+++.+++++||+|+++.|+|++... .++..|.++..++. .|+++|+++++.
T Consensus 111 i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~ 186 (425)
T 2r2n_A 111 LCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQ----SLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNP 186 (425)
T ss_dssp EEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH----HHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSST
T ss_pred EEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH----HHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccc
Confidence 4444555699999999999999999999999998653 34556888777764 378999998862
Q ss_pred --CCceEEEE-eCCCCCCCccccHH---HHHHHHHhCCCEEEEeCCCCCCCc-----ccccc---cCCcEEEECCccccC
Q 009167 295 --NNVSLFFT-ESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLN-----QKALS---LGADLVLHSATKFIG 360 (541)
Q Consensus 295 --~~tklV~l-esP~NPtG~i~dl~---~Ia~la~~~gi~lIvDea~a~~~~-----~~~~~---~gaDivv~S~sK~lg 360 (541)
.++++|++ .+|+||||.+++.+ +|+++|++||++||+||+|+.... ..... .+.++++.|+||+++
T Consensus 187 ~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~ 266 (425)
T 2r2n_A 187 QKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS 266 (425)
T ss_dssp TSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC
T ss_pred cCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc
Confidence 24888877 68999999999866 999999999999999999863211 11111 245799999999997
Q ss_pred CCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---------HHHHHHHHHHHHHHHHHHHHh-CCCc
Q 009167 361 GHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---------LHLRVQQQNSTALRMAKILEA-HPKV 430 (541)
Q Consensus 361 g~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---------l~~r~~~~~~~a~~la~~L~~-~p~v 430 (541)
+| ...|++++++++++.+.........+.++..+..+...++. +....+...++++.+.+.|++ .|.+
T Consensus 267 -~G-lRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 344 (425)
T 2r2n_A 267 -SG-LRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGL 344 (425)
T ss_dssp -ST-TCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred -Cc-cceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 44 45799999999999888766555555566655555444443 222233444667777788876 4554
Q ss_pred eEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHh
Q 009167 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 510 (541)
Q Consensus 431 ~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~ 510 (541)
..+..|. .|.++++++++.......+.+.|...++.+..|..+.. +
T Consensus 345 ~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~---~--------------- 390 (425)
T 2r2n_A 345 AEWHVPA----------------AGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYV---D--------------- 390 (425)
T ss_dssp EEECCCS----------------BSSEEEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSS---S---------------
T ss_pred eEEeCCC----------------ceEEEEEEeCCCCCHHHHHHHHHHHCCcEEechhhhcC---C---------------
Confidence 3333332 56789999975211111134445556788877755421 0
Q ss_pred cCCCCCeEEEEecCCC---HHHHHHHHHHHHh
Q 009167 511 YGIMDNLVRFSFGVED---FEDLKADVLQALH 539 (541)
Q Consensus 511 ~gi~~~~IRlSvG~e~---~edli~dL~~AL~ 539 (541)
.+..++.||||++..+ .++.++.|.++++
T Consensus 391 ~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 422 (425)
T 2r2n_A 391 SSAPSPYLRASFSSASPEQMDVAFQVLAQLIK 422 (425)
T ss_dssp TTSCCCEEEEECSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 0012578999998433 3445555555554
No 87
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.93 E-value=5.5e-25 Score=230.72 Aligned_cols=287 Identities=15% Similarity=0.129 Sum_probs=197.7
Q ss_pred hhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----C
Q 009167 210 PTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----~ 283 (541)
+...+++++||+++|. +.++++++|++|+.+++.+++++||+|+++.++|++.... ++..|.++..++. .
T Consensus 74 ~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~ 149 (397)
T 2zyj_A 74 EGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQA----FRLQGPRFLTVPAGEEGP 149 (397)
T ss_dssp TCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHTTCCEEEEEEEETTEE
T ss_pred CCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH----HHHcCCEEEecCcCCCCC
Confidence 3568999999999986 3456666667999999999999999999999999986643 3445777766653 3
Q ss_pred CHHHHHHhccCCCceEEE-EeCCCCCCCccccHH---HHHHHHHhCCCEEEEeCCCCCCCc-----cccccc------CC
Q 009167 284 DMEGLEAALNNNNVSLFF-TESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLN-----QKALSL------GA 348 (541)
Q Consensus 284 d~e~Le~al~~~~tklV~-lesP~NPtG~i~dl~---~Ia~la~~~gi~lIvDea~a~~~~-----~~~~~~------ga 348 (541)
|+++|++++++.++++|+ +++|+||||.++|.+ +|+++|+++|+++|+|++|..+.. .....+ +.
T Consensus 150 d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (397)
T 2zyj_A 150 DLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPG 229 (397)
T ss_dssp CHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCC
T ss_pred CHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCe
Confidence 899999998753488874 689999999999855 899999999999999999876432 111222 34
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~-----tl~~r~~~~~~~a~~la~~ 423 (541)
++++.|+||+++ +| ...|++++++++++.++.....+....++..+..+...++ .+....++..++++.+.+.
T Consensus 230 ~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (397)
T 2zyj_A 230 VIYLGSFSKVLS-PG-LRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHA 307 (397)
T ss_dssp EEEEEESTTTTC-GG-GCCEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccccc-cc-ceeEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999998 44 4579999999998888765443322234554444444443 2334444555677788888
Q ss_pred HHh-CC-CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcccccc
Q 009167 424 LEA-HP-KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW 501 (541)
Q Consensus 424 L~~-~p-~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~ 501 (541)
|++ .| .+. +..|. .|.+++++++.+ ....++.+.|...++.+..|..+..
T Consensus 308 L~~~~~~g~~-~~~~~----------------~g~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~f~~---------- 359 (397)
T 2zyj_A 308 LDREVPKEVR-YTRPK----------------GGMFVWMELPKG-LSAEGLFRRALEENVAFVPGGPFFA---------- 359 (397)
T ss_dssp HHHHSCTTSE-ECCCS----------------BSSEEEEECSTT-CCHHHHHHHHHHTTEEEEESGGGCT----------
T ss_pred HHHHCCCCeE-EccCC----------------ccEEEEEEcCCC-CCHHHHHHHHHHCCCEEechHHhcC----------
Confidence 876 35 343 22222 467899998642 1244566666555887777654321
Q ss_pred CCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHHHHHh
Q 009167 502 DLSQSERLKYGIMDNLVRFSFGVED---FEDLKADVLQALH 539 (541)
Q Consensus 502 ~~~~~~~~~~gi~~~~IRlSvG~e~---~edli~dL~~AL~ 539 (541)
.+..++.+|||++..+ .++.++.|.++++
T Consensus 360 ---------~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 391 (397)
T 2zyj_A 360 ---------NGGGENTLRLSYATLDREGIAEGVRRLGRALK 391 (397)
T ss_dssp ---------TSCCTTEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred ---------CCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 0113578999999753 3445555555554
No 88
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.93 E-value=1.7e-24 Score=228.26 Aligned_cols=285 Identities=13% Similarity=0.097 Sum_probs=198.2
Q ss_pred chhHHHHHHHHHHHh----CC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEE
Q 009167 209 NPTTVVVEEKMSALE----GA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~----g~-----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
.+...++++.||+++ |. ++++++++|++|+.+++.+++++||+|+++.++|++....+ ...|.++..
T Consensus 74 ~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~ 149 (412)
T 2x5d_A 74 SRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGA----VIAGAQVRS 149 (412)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HHHTCEEEE
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHcCCEEEE
Confidence 345678899999888 73 36778888889999999999999999999999999866443 345777776
Q ss_pred eCCC-------CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc-----cccc
Q 009167 280 IDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKAL 344 (541)
Q Consensus 280 vd~~-------d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~-----~~~~ 344 (541)
++.+ |+++|++++++ ++++|++++|+||||.++| +++|+++|++||+++|+|++|..+.. ....
T Consensus 150 ~~~~~~~~~~~d~~~l~~~i~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~ 228 (412)
T 2x5d_A 150 VPLVPGIDFFNELERAIRESIP-KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIM 228 (412)
T ss_dssp EECSTTSCHHHHHHHHHHTEES-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGG
T ss_pred eecCCccCCCCCHHHHHHhccc-CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChh
Confidence 6542 46889999886 4899999999999999987 57899999999999999999876432 1111
Q ss_pred c----cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----HHHHHHHHHHH
Q 009167 345 S----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNST 416 (541)
Q Consensus 345 ~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~ 416 (541)
. .+.|+++.|+||+++.+| ...|++++++++++.+.......+...++..++.+...++. +....++..++
T Consensus 229 ~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 307 (412)
T 2x5d_A 229 QVPGAKDIAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQR 307 (412)
T ss_dssp GSTTGGGTEEEEEECC-CCSCTT-SCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHH
T ss_pred hccCccCcEEEEecCccccCCcc-cceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 1 367899999999998555 34789999999999888766554455566555554445542 34445556677
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH--HHHHHHHHHc-cCcCeecccCCcccccc
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDAL-KIPYIAPSFGGCESIVD 493 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~--~~~~~~l~~L-~~~~iavS~G~~~sl~~ 493 (541)
++.+.+.|+++ .+. + ++. ..|.++++.++.+. .....+.+.| +..++.+..|..+..
T Consensus 308 ~~~l~~~L~~~-g~~-~-~~~---------------~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~-- 367 (412)
T 2x5d_A 308 RDVLVKGLREA-GWM-V-ENP---------------KASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGD-- 367 (412)
T ss_dssp HHHHHHHHHHH-TCC-C-CCC---------------SBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGCG--
T ss_pred HHHHHHHHHHC-CCE-e-cCC---------------CeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhCC--
Confidence 78888888765 221 1 111 02457888886321 0245566666 335777776654311
Q ss_pred cCccccccCCCHHHHHhcCCCCCeEEEEecCCCHH---HHHHHHHHHHh
Q 009167 494 QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFE---DLKADVLQALH 539 (541)
Q Consensus 494 ~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~e---dli~dL~~AL~ 539 (541)
..++.||||++. +.+ +.++.|.++|+
T Consensus 368 -------------------~~~~~iRis~~~-~~~~l~~~l~~l~~~l~ 396 (412)
T 2x5d_A 368 -------------------YGDDHVRFALIE-NRDRLRQAVRGIKAMFR 396 (412)
T ss_dssp -------------------GGTTEEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred -------------------CCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 025789999997 333 33444445544
No 89
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.93 E-value=5.9e-25 Score=230.05 Aligned_cols=205 Identities=21% Similarity=0.198 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHH
Q 009167 212 TVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 212 ~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~L 288 (541)
.+.+++.+++++|. ++++++++|++|+.+++.++ +||+|+++.++|+++...+. .++..|+++..+ .|+++|
T Consensus 60 ~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v--~d~~~l 134 (374)
T 2aeu_A 60 AEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIER-SCKIVNAKYFES--DKVGEI 134 (374)
T ss_dssp HHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHH-HHHHTTCEEEEE--SCHHHH
T ss_pred HHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHH-HHHHcCcEEEEe--CCHHHH
Confidence 45677777788898 67889999999999999987 99999999999988766554 456678888888 689999
Q ss_pred HHhccCCCceE-EEEeCCCCCCC-ccccHHHHHHHHHhCCCEEEEeCCCCCCC---ccc--ccccCCcEEEECCccccCC
Q 009167 289 EAALNNNNVSL-FFTESPTNPFL-RCVDVKLVSDLCHKKGAIVCIDGTFATPL---NQK--ALSLGADLVLHSATKFIGG 361 (541)
Q Consensus 289 e~al~~~~tkl-V~lesP~NPtG-~i~dl~~Ia~la~~~gi~lIvDea~a~~~---~~~--~~~~gaDivv~S~sK~lgg 361 (541)
+++ ++ ++++ |++++|+|||| ...++++|.++|+++|++||+|++|+... ... +...++|+++.|+||+++|
T Consensus 135 ~~~-~~-~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g 212 (374)
T 2aeu_A 135 LNK-ID-KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEG 212 (374)
T ss_dssp HTT-CC-TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSS
T ss_pred Hhc-CC-CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccC
Confidence 988 65 5999 99999999999 88999999999999999999999987643 111 4556889999999999887
Q ss_pred CCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHH-HHHHHHHHHHHH----HHHHHh
Q 009167 362 HNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL-RVQQQNSTALRM----AKILEA 426 (541)
Q Consensus 362 ~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~-r~~~~~~~a~~l----a~~L~~ 426 (541)
. .+|++++++++++.++.....++..+++..++++..+++.+.. +++++.++++.+ .+.|.+
T Consensus 213 ~---~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 279 (374)
T 2aeu_A 213 P---RGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNK 279 (374)
T ss_dssp C---SCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred c---ceEEEEECHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 3799999999999988877667777788877777777776544 566666666666 455543
No 90
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.93 E-value=9.7e-25 Score=227.90 Aligned_cols=288 Identities=14% Similarity=0.131 Sum_probs=200.0
Q ss_pred chhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC---
Q 009167 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e---~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
.+..+++++.+++++|.+ .++++++|++|+.+++.+++++||+|+++.++|++. .+...++..|.++..++.
T Consensus 66 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~ 143 (393)
T 1vjo_A 66 LALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGN--RLVDMAGRYGADVRTISKPWG 143 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHH--HHHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHH--HHHHHHHHcCCceEEEecCCC
Confidence 467789999999999984 466667778999999999999999999999999872 122344556888877763
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCcccc
Q 009167 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKFI 359 (541)
Q Consensus 283 --~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~sK~l 359 (541)
.|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+. .......++|+++.|+||++
T Consensus 144 ~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l 223 (393)
T 1vjo_A 144 EVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGL 223 (393)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTT
T ss_pred CCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccc
Confidence 589999999975138999999999999999999999999999999999999987432 12223457899999999999
Q ss_pred CCCCCceEEEEEeChHHHHHHHHH----h----------------hhcCCCchHHHHHHHHHhHHHH-----HHHHHHHH
Q 009167 360 GGHNDVLAGSISGSGKLVTQIRNL----H----------------HVLGGALNPNAAYLIIRGMKTL-----HLRVQQQN 414 (541)
Q Consensus 360 gg~gd~~gG~lv~~~~li~~l~~~----~----------------~~~G~~~s~~~a~l~l~~l~tl-----~~r~~~~~ 414 (541)
++++ ..|++++++++++.++.. . ...+++.++.....+...++.+ ....++..
T Consensus 224 ~~~~--~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 301 (393)
T 1vjo_A 224 GCSP--GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQ 301 (393)
T ss_dssp CSCS--SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cCCC--ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 8776 358999999888877431 0 0111144555444444444442 34455666
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCc-CeecccCCcccccc
Q 009167 415 STALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIVD 493 (541)
Q Consensus 415 ~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~-~iavS~G~~~sl~~ 493 (541)
++++.+.+.|++. ++. +..|. .+ ..+++++|.++.+ ....++.+.|... ++.+..|..+.
T Consensus 302 ~~~~~l~~~L~~~-g~~-~~~~~-----~~--------~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~--- 362 (393)
T 1vjo_A 302 KNVEYLWERLEDI-GLS-LHVEK-----EY--------RLPTLTTVCIPDG-VDGKAVARRLLNEHNIEVGGGLGEL--- 362 (393)
T ss_dssp HHHHHHHHHHHHT-TCC-BSSCG-----GG--------BCSSEEEEECCTT-CCHHHHHHHHHHHHCEECEECCGGG---
T ss_pred HHHHHHHHHHHHc-CCc-ccCCc-----cc--------cCCcEEEEEcCCC-CCHHHHHHHHHhhCCEEEecCcccc---
Confidence 7788888888875 332 11110 10 1457889988632 2345666666554 77777664311
Q ss_pred cCccccccCCCHHHHHhcCCCCCeEEEE-ecCCCHHHHHHHHHHHHh
Q 009167 494 QPAIMSYWDLSQSERLKYGIMDNLVRFS-FGVEDFEDLKADVLQALH 539 (541)
Q Consensus 494 ~pa~~~~~~~~~~~~~~~gi~~~~IRlS-vG~e~~edli~dL~~AL~ 539 (541)
.++.+||| ++..+.++.++.+.++|.
T Consensus 363 --------------------~~~~iRis~~~~~~~~~~i~~~~~~l~ 389 (393)
T 1vjo_A 363 --------------------AGKVWRVGLMGFNSRKESVDQLIPALE 389 (393)
T ss_dssp --------------------TTTEEEEECCGGGCSHHHHHHHHHHHH
T ss_pred --------------------CCCEEEEeCCccCChHHHHHHHHHHHH
Confidence 25789999 465444444444444443
No 91
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.93 E-value=1.9e-24 Score=224.52 Aligned_cols=252 Identities=14% Similarity=0.095 Sum_probs=179.9
Q ss_pred CCCchhHHHHHHHHHHH------hCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEE
Q 009167 206 RYGNPTTVVVEEKMSAL------EGA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l------~g~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v 277 (541)
+|+++...++++++|++ .+. +..+++++|++++.+++.+++++||+|+++.++|++.... +...|.++
T Consensus 65 ~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~~----~~~~g~~~ 140 (369)
T 3cq5_A 65 RYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPIL----AKGTHTEF 140 (369)
T ss_dssp SCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCSTTCEEEEEESSCTHHHHH----HHHTTCEE
T ss_pred cCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcCCCCEEEEcCCChHHHHHH----HHHcCCEE
Confidence 34444446899999998 443 3455555556999999999999999999999999986543 34457777
Q ss_pred EEeCC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-cccc----ccC
Q 009167 278 TVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKAL----SLG 347 (541)
Q Consensus 278 ~~vd~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~----~~g 347 (541)
..++. .|+++|++++++.++++|++++|+||||.++|++++.++++.+++++|+|++|+.+.. .... ..+
T Consensus 141 ~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 220 (369)
T 3cq5_A 141 IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYP 220 (369)
T ss_dssp EEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCT
T ss_pred EEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCC
Confidence 77753 3789999998752389999999999999999999999999999999999999875432 1212 234
Q ss_pred -CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHH
Q 009167 348 -ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 348 -aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~ 423 (541)
.++++.|+||+++.+| ...|++++++++++.++.....++ .++..++.+...++ .+..+.++..++++.+.+.
T Consensus 221 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 297 (369)
T 3cq5_A 221 TKLVVSRTMSKAFDFAG-GRLGYFVANPAFIDAVMLVRLPYH--LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAAR 297 (369)
T ss_dssp TTEEEEEESSSTTSCGG-GCCEEEEECTHHHHHHHTTSCTTC--SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCEEEEEechHhcCCcc-cceEEEEeCHHHHHHHHHcCCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 6799999999998555 457899999998888876554433 45555554444444 3444555666778888888
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccC
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G 486 (541)
|++. .+..+ |. .|+++++.++. ...++.+.|...++.+..|
T Consensus 298 L~~~-g~~~~--~~----------------~~~~~~~~~~~---~~~~l~~~l~~~gi~v~~~ 338 (369)
T 3cq5_A 298 LEEL-GYAVV--PS----------------ESNFVFFGDFS---DQHAAWQAFLDRGVLIRDV 338 (369)
T ss_dssp HHHH-TCEEE--CC----------------SSSEEEEECCS---SHHHHHHHHHHTTEECBCC
T ss_pred HHhC-CCEEC--CC----------------CCeEEEEECCC---CHHHHHHHHHHCCEEEEEC
Confidence 8763 34321 21 36788998862 2345566665567666554
No 92
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.93 E-value=1.6e-24 Score=222.19 Aligned_cols=281 Identities=11% Similarity=0.034 Sum_probs=193.7
Q ss_pred hhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC----
Q 009167 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
+...+++++||+++|.+ .++++++|++|+.+++.+++++||+|+++.++|++.. +...++..|.++..++.+
T Consensus 34 ~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 111 (352)
T 1iug_A 34 EVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSER--FYEIALEAGLVVERLDYPYGDT 111 (352)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCC
Confidence 45789999999999985 4666778889999999999999999999999999865 223445568888877642
Q ss_pred -CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC--CCEEEEeCCCCCCCc-ccccccCCcEEEECCcccc
Q 009167 284 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (541)
Q Consensus 284 -d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~--gi~lIvDea~a~~~~-~~~~~~gaDivv~S~sK~l 359 (541)
|+++|++ + ++++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+.. ......++|+++.|+||++
T Consensus 112 ~d~~~l~~---~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 187 (352)
T 1iug_A 112 PRPEDVAK---E-GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGL 187 (352)
T ss_dssp CCTTTSCC---S-SCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTT
T ss_pred CCHHHHhc---c-CCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccc
Confidence 5666655 3 489999999999999999999999999999 999999999874322 2223457899999999966
Q ss_pred CCCCCceEEEEEeChHHHHH---------HHH----H-hhhcCCCchHHHHHHHHHhHHH----HHHHHHHHHHHHHHHH
Q 009167 360 GGHNDVLAGSISGSGKLVTQ---------IRN----L-HHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMA 421 (541)
Q Consensus 360 gg~gd~~gG~lv~~~~li~~---------l~~----~-~~~~G~~~s~~~a~l~l~~l~t----l~~r~~~~~~~a~~la 421 (541)
+++.+ .|+++.+++++++ ++. . .....++.+......+...++. +....++..++++++.
T Consensus 188 ~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~ 265 (352)
T 1iug_A 188 MCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLY 265 (352)
T ss_dssp CCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHH
T ss_pred cCCCc--eeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55432 5888888887654 221 1 1112233444333333333333 3445566667888888
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcccccc
Q 009167 422 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW 501 (541)
Q Consensus 422 ~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~ 501 (541)
+.|++. ++. +..|. ..+++++|.++.+ ....++.+.|...++.++.|.. +
T Consensus 266 ~~L~~~-g~~-~~~~~---------------~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~------~------ 315 (352)
T 1iug_A 266 GVGEEG-GLR-PVPKR---------------FSPAVAAFYLPEG-VPYARVKEAFAQRGAVIAGGQG------P------ 315 (352)
T ss_dssp HHHHHT-TCE-ESCSS---------------BCTTCEEEECCTT-CCHHHHHHHHHTTTEECEECCG------G------
T ss_pred HHHHHC-CCc-ccccc---------------cCCeEEEEEcCCC-CCHHHHHHHHHHCCEEEEeCCC------c------
Confidence 888876 443 32221 1467899998732 2345677777666877776541 0
Q ss_pred CCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 502 DLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 502 ~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
..++.|||+++..++++.++.+.++|+
T Consensus 316 -----------~~~~~iRi~~~~~~~~~~i~~~~~~l~ 342 (352)
T 1iug_A 316 -----------LKGKVFRLSLMGAYDRYEALGVAGMFR 342 (352)
T ss_dssp -----------GTTTEEEECCCSSCCHHHHHHHHHHHH
T ss_pred -----------cCCCEEEEEccccCCHHHHHHHHHHHH
Confidence 025789999997654444444444443
No 93
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.93 E-value=4.8e-24 Score=223.68 Aligned_cols=285 Identities=16% Similarity=0.085 Sum_probs=201.2
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCH
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~ 285 (541)
..+...+++++||+++|.++.+++++|++++..++..+. .+||+|+++.++|+++...+ +..|.++..++.+|+
T Consensus 89 ~~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~d~ 164 (401)
T 2bwn_A 89 TTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGI----KRNAGPKRIFRHNDV 164 (401)
T ss_dssp CBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHH----HHSCCCEEEECTTCH
T ss_pred ChHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHHHHHhcCCCCCEEEECchhhHHHHHHH----HHcCCeEEEEcCCCH
Confidence 346789999999999999889999999988777776653 58999999999999876443 346888888988899
Q ss_pred HHHHHhccC---CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc-c------ccc--cCCcEEEE
Q 009167 286 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K------ALS--LGADLVLH 353 (541)
Q Consensus 286 e~Le~al~~---~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~-~------~~~--~gaDivv~ 353 (541)
++|++.++. .++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+... . ... ...|+++.
T Consensus 165 ~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~ 244 (401)
T 2bwn_A 165 AHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNG 244 (401)
T ss_dssp HHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEE
T ss_pred HHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEe
Confidence 999988861 25899999999999999999999999999999999999998743211 0 111 13589999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHHHHHHhHHHH-----HHHHHHHHHHHHHHHHHHHh
Q 009167 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALRMAKILEA 426 (541)
Q Consensus 354 S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~l~l~~l~tl-----~~r~~~~~~~a~~la~~L~~ 426 (541)
|++|.+++.| |++++++++++.++.... .+....++..+..+...++.+ ....++..++++++.+.|++
T Consensus 245 s~sK~~~~~G----G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 320 (401)
T 2bwn_A 245 TLAKAYGVFG----GYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKA 320 (401)
T ss_dssp ESSSTTCSCC----EEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred echhhccCCC----CEEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999653 899999888887765322 222222344444334444433 34455666777888888876
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCcccccccCccccccCCCH
Q 009167 427 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQ 505 (541)
Q Consensus 427 ~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~~~~~~~~ 505 (541)
. ++. +..| .+++++|.++. ......+.+.|. ..++.+..+..+.. +
T Consensus 321 ~-g~~-~~~~-----------------~~~~~~~~~~~-~~~~~~~~~~L~~~~gi~v~~~~~~~~------------~- 367 (401)
T 2bwn_A 321 L-GMP-IIDH-----------------GSHIVPVVIGD-PVHTKAVSDMLLSDYGVYVQPINFPTV------------P- 367 (401)
T ss_dssp H-TCC-BCCC-----------------SSSCEEEECCC-HHHHHHHHHHHHHHHCEECCEECTTTS------------C-
T ss_pred C-CCc-ccCC-----------------CCCeEEEEeCC-hHHHHHHHHHHHhcCCEEEeecCCCCC------------C-
Confidence 4 321 1111 24589999864 244566777763 55776654432100 0
Q ss_pred HHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 506 SERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 506 ~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
...+.+|||++..++++.++.+.++|++
T Consensus 368 -------~~~~~iRis~~~~~t~~~i~~~~~~l~~ 395 (401)
T 2bwn_A 368 -------RGTERLRFTPSPVHDLKQIDGLVHAMDL 395 (401)
T ss_dssp -------TTCCEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred -------CCCceEEEEeeCCCCHHHHHHHHHHHHH
Confidence 0235899999977666666666666653
No 94
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.93 E-value=2.2e-24 Score=224.88 Aligned_cols=288 Identities=10% Similarity=0.022 Sum_probs=194.7
Q ss_pred hhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-----
Q 009167 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----- 282 (541)
+..+++++++|+++|.+ .++++++|++|+.+++.+++++||+|+++.++|++.. +...++..|.++..++.
T Consensus 42 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 119 (392)
T 2z9v_A 42 LLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKG--FGYWAKRYSPHLLEIEVPYNEA 119 (392)
T ss_dssp HHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHHCSCEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHHcCCceEEeeCCCCCC
Confidence 45789999999999974 5666678889999999999999999999999998763 22334445777777754
Q ss_pred CCHHHHHHhccC-CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcEEEECCccccC
Q 009167 283 ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIG 360 (541)
Q Consensus 283 ~d~e~Le~al~~-~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDivv~S~sK~lg 360 (541)
.|+++|++++++ .++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+....++|+++.|+||+++
T Consensus 120 ~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~ 199 (392)
T 2z9v_A 120 IDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLG 199 (392)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTC
T ss_pred CCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCccccc
Confidence 379999999942 2589999999999999999999999999999999999999875432 23334578999999999766
Q ss_pred CCCCceEEEEEeChHHHHHHHHHh--------------------hhcCCCchHHHHHHHHHhHHH-----HHHHHHHHHH
Q 009167 361 GHNDVLAGSISGSGKLVTQIRNLH--------------------HVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNS 415 (541)
Q Consensus 361 g~gd~~gG~lv~~~~li~~l~~~~--------------------~~~G~~~s~~~a~l~l~~l~t-----l~~r~~~~~~ 415 (541)
++.+ .|+++++++++++++... ....++.+......+...++. +....++..+
T Consensus 200 ~~~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 277 (392)
T 2z9v_A 200 APPG--LTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHAL 277 (392)
T ss_dssp CCSC--CEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCCc--eeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 5432 389999998888776421 011223333332222223332 3344555667
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCc-CeecccCCccccccc
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIVDQ 494 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~-~iavS~G~~~sl~~~ 494 (541)
+++++.+.|++. ++. +..|. +. ...+++++|.++.+ .....+.+.|... ++.+..|..+
T Consensus 278 ~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gi~v~~g~~~----- 337 (392)
T 2z9v_A 278 TAKAMRAGVTAM-GLS-VWAAS----DS--------IASPTTTAVRTPDG-VDEKALRQAARARYGVVFSSGRGE----- 337 (392)
T ss_dssp HHHHHHHHHHHT-TCC-BSSSS----GG--------GBCTTEEEEECCTT-CCHHHHHHHHHHHHCEECEECCGG-----
T ss_pred HHHHHHHHHHHc-CCe-eccCC----cc--------ccCCceEEEECCCC-CCHHHHHHHHHhcCCEEEecCCCC-----
Confidence 778888888775 332 21111 00 01467889998632 1234566666554 7777665321
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEe-c-C---CCHHHHHHHHHHHHh
Q 009167 495 PAIMSYWDLSQSERLKYGIMDNLVRFSF-G-V---EDFEDLKADVLQALH 539 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSv-G-~---e~~edli~dL~~AL~ 539 (541)
..++.+|||+ + . ++.+.+++.|.++++
T Consensus 338 ------------------~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~ 369 (392)
T 2z9v_A 338 ------------------TLGKLTRIGHMGPTAQPIYAIAALTALGGAMN 369 (392)
T ss_dssp ------------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCCeEEEeCcccccCHHHHHHHHHHHHHHHH
Confidence 0257899994 6 2 233445555555554
No 95
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.93 E-value=3e-24 Score=224.09 Aligned_cols=283 Identities=12% Similarity=0.136 Sum_probs=197.0
Q ss_pred hHHHHHHHHHHHh----CC----Cc-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALE----GA----ES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----e~-~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...++++++|+++ |. ++ ++++++|++|+.+++.+++++||+|+++.++|++....+ ...|.++..++
T Consensus 64 g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~v~ 139 (389)
T 1gd9_A 64 GLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAV----ILAGGKPVEVP 139 (389)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHH----HHHTCEEEEEE
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHH----HHCCCEEEEec
Confidence 4567888888887 72 46 788888889999999999999999999999999966443 34577777665
Q ss_pred C-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-----cccc-
Q 009167 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS- 345 (541)
Q Consensus 282 ~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-----~~~~- 345 (541)
. .|+++|++++++ ++++|++++|+||||.+++ +++|+++|++||+++|+|++|+.+... ....
T Consensus 140 ~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 218 (389)
T 1gd9_A 140 TYEEDEFRLNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASL 218 (389)
T ss_dssp CCGGGTTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred cCCccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhc
Confidence 3 278999999987 5999999999999999985 889999999999999999998764321 1122
Q ss_pred ---cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH------HHHHHHHHHHH
Q 009167 346 ---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNST 416 (541)
Q Consensus 346 ---~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t------l~~r~~~~~~~ 416 (541)
.+.|+++.|+||.++.+| ...|++++++++++.++..........++.....+...++. +....++..++
T Consensus 219 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 297 (389)
T 1gd9_A 219 DGMFERTITVNGFSKTFAMTG-WRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRR 297 (389)
T ss_dssp TTCGGGEEEEEESTTTTTCGG-GCCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEecChhhcCCcc-cceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHH
Confidence 357899999999998555 34699999999998888765544444555555444444432 33344555677
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCcccccccC
Q 009167 417 ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 417 a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~p 495 (541)
++.+.+.|+++ ++. +..| ..|.++++.++.......++.+.|. ..++.+..|..+..
T Consensus 298 ~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---- 355 (389)
T 1gd9_A 298 RKLVWKRLNEM-GLP-TVKP----------------KGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGK---- 355 (389)
T ss_dssp HHHHHHHHHHT-TCC-CCCC----------------CBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCG----
T ss_pred HHHHHHHHHHc-CCe-ecCC----------------CeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCC----
Confidence 77888888775 321 1111 1244677777520012445666664 56777776644321
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCHH---HHHHHHHHHHh
Q 009167 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFE---DLKADVLQALH 539 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~e---dli~dL~~AL~ 539 (541)
..++.+|||++. +.+ +.++.|.++++
T Consensus 356 -----------------~~~~~iRi~~~~-~~~~i~~~l~~l~~~~~ 384 (389)
T 1gd9_A 356 -----------------AGEGYVRISYAT-AYEKLEEAMDRMERVLK 384 (389)
T ss_dssp -----------------GGTTBEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred -----------------CCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 025689999996 333 33444455544
No 96
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=8.3e-25 Score=231.98 Aligned_cols=286 Identities=14% Similarity=0.125 Sum_probs=195.5
Q ss_pred hHHHHHHHHHHHh----C---C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALE----G---A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g---~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+++++||+++ | . +.++++++|++|+.+++.+++++||+|+++.|+|++.... +...|.++..++
T Consensus 86 g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~ 161 (425)
T 1vp4_A 86 GDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINA----FRQYLANFVVVP 161 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHTTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH----HHHcCCEEEEec
Confidence 4678889999888 8 3 3455666667999999999999999999999999986543 344677777665
Q ss_pred C----CCHHHHHHhccC-------CCceEEE-EeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc-----c
Q 009167 282 P----ADMEGLEAALNN-------NNVSLFF-TESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----Q 341 (541)
Q Consensus 282 ~----~d~e~Le~al~~-------~~tklV~-lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~-----~ 341 (541)
. .|+++|++++++ .++++|+ +++|+||||.++| +++|+++|+++|++||+|++|+.+.. .
T Consensus 162 ~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~ 241 (425)
T 1vp4_A 162 LEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVD 241 (425)
T ss_dssp EETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCC
T ss_pred cCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCc
Confidence 3 378999988864 2489985 7899999999997 56889999999999999999876432 1
Q ss_pred cc--c-ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH------HHHHHHH
Q 009167 342 KA--L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQ 412 (541)
Q Consensus 342 ~~--~-~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t------l~~r~~~ 412 (541)
.. + ..+.++++.|+||+++ +| ...|++++++++++.++..........++..++.+...++. +....++
T Consensus 242 ~~~~~~~~~~~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (425)
T 1vp4_A 242 PIFKIGGPERVVLLNTFSKVLA-PG-LRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIEL 319 (425)
T ss_dssp CHHHHHCTTTEEEEEESTTTTC-GG-GCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHH
T ss_pred CHHHhCCCCCEEEEeccccccc-cc-cceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 11 1 1256799999999998 44 46899999999988887655443333455555555555543 2333444
Q ss_pred HHHHHHHHHHHHHhC-C---CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCc
Q 009167 413 QNSTALRMAKILEAH-P---KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 413 ~~~~a~~la~~L~~~-p---~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
..++++.+.+.|+++ | .+. +..|. .|.++++.++.+ ....++.+.|...++.+..|..
T Consensus 320 ~~~~~~~l~~~L~~~~~~~~g~~-~~~~~----------------~g~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~g~~ 381 (425)
T 1vp4_A 320 YRRKRTVMLNALEEYFSDIPGVK-WVKSE----------------GGLFIWLTLPEG-FDTWEMFEYAKRKKVFYVPGRV 381 (425)
T ss_dssp HHHHHHHHHHHHHHHSTTSTTCE-ECCCS----------------BSSEEEEECCTT-CCTTTTHHHHHHHTEECEEGGG
T ss_pred HHHHHHHHHHHHHHhCCCCCceE-EecCC----------------ccEEEEEEcCCC-CCHHHHHHHHHHCCCEEECchh
Confidence 556777788888763 4 232 22221 467899998732 1123445555444777776654
Q ss_pred ccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC---CHHHHHHHHHHHHh
Q 009167 489 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE---DFEDLKADVLQALH 539 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e---~~edli~dL~~AL~ 539 (541)
+.. .+..++.||||++.. +.+..++.|.++++
T Consensus 382 f~~-------------------~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~ 416 (425)
T 1vp4_A 382 FKV-------------------YDEPSPSMRLSFCLPPDEKIVEGIKRLREVVL 416 (425)
T ss_dssp GCT-------------------TCCCCSEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred hcC-------------------CCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 321 011357899999974 33445556666554
No 97
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.93 E-value=2.5e-24 Score=228.29 Aligned_cols=284 Identities=12% Similarity=0.066 Sum_probs=199.8
Q ss_pred CCCch-hHHHHHHHHHHHh-----CC--Cc---EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhccc-C
Q 009167 206 RYGNP-TTVVVEEKMSALE-----GA--ES---TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK-M 273 (541)
Q Consensus 206 R~~~p-~~~~Le~~LA~l~-----g~--e~---~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~-~ 273 (541)
+|+.+ ...+|+++||+++ +. ++ ++++++|++|+.+++.+++++||+|+++.|+|++... .+.. .
T Consensus 83 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~~ 158 (430)
T 2x5f_A 83 PYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKL----VFNTRN 158 (430)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHH----HHTTTT
T ss_pred ccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHH----HHHHhc
Confidence 44443 4678999999998 65 45 6666667799999999999999999999999998653 3445 6
Q ss_pred CeEEEEeCC------CCHHHHHHhccC--CCceEEEEeCCCCCCCcccc---HHHHHHHHHh-----CCCEEEEeCCCCC
Q 009167 274 GITATVIDP------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHK-----KGAIVCIDGTFAT 337 (541)
Q Consensus 274 Gi~v~~vd~------~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d---l~~Ia~la~~-----~gi~lIvDea~a~ 337 (541)
|.++..++. .|+++|++++++ .++++|++++|+||||.++| +++|.++|++ +|+++|+|++|..
T Consensus 159 g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~ 238 (430)
T 2x5f_A 159 GANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYG 238 (430)
T ss_dssp CCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTT
T ss_pred CCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhccc
Confidence 888877753 368999998865 14899999999999999999 8899999999 9999999999875
Q ss_pred CCcc-----c---cc-c-cCC---cEEEECCccccCCCCCceEEEEEe---ChHHHHHHHHHhhh----cCCCchHHHHH
Q 009167 338 PLNQ-----K---AL-S-LGA---DLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHV----LGGALNPNAAY 397 (541)
Q Consensus 338 ~~~~-----~---~~-~-~ga---Divv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~~~~~~----~G~~~s~~~a~ 397 (541)
.... . .+ . .+. ++++.|+||.++.+| ...|++++ ++++++.+...... .....++..++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 317 (430)
T 2x5f_A 239 LFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWG-FRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQS 317 (430)
T ss_dssp CBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGG-GCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHH
T ss_pred ccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCC-CCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHH
Confidence 3211 1 11 1 345 788999999998565 34688888 88998888765443 33445666655
Q ss_pred HHHHhHH----HHHH---HHHHHHHHHHHHHHHHHhC--C-CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHH
Q 009167 398 LIIRGMK----TLHL---RVQQQNSTALRMAKILEAH--P-KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT 467 (541)
Q Consensus 398 l~l~~l~----tl~~---r~~~~~~~a~~la~~L~~~--p-~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~ 467 (541)
.+...++ .... ..++..++++.+.+.|+++ + .+. +..| ..|.++++.+++ .
T Consensus 318 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~-~~~~----------------~~g~~~~~~~~~--~ 378 (430)
T 2x5f_A 318 AVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQ-AYDF----------------NSGYFMAIKVHD--V 378 (430)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEE-ECCC----------------CBSSEEEEEESS--S
T ss_pred HHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCce-eeCC----------------CceEEEEeCCCC--C
Confidence 5555555 2222 4455556777777888732 1 232 2111 134468999972 2
Q ss_pred HHHHHHHHccC-cCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec---CCCHHHHHHHHHHHHhh
Q 009167 468 ATIKFIDALKI-PYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG---VEDFEDLKADVLQALHA 540 (541)
Q Consensus 468 ~~~~~l~~L~~-~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG---~e~~edli~dL~~AL~~ 540 (541)
....+.+.|.. .++.+..| .++.+|||++ .++.+++++.|.+++++
T Consensus 379 ~~~~~~~~l~~~~gi~v~~g---------------------------~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 379 DPEALRKHLIDKYSIGVIAL---------------------------NATDIRIAFSCVEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp CHHHHHHHHHHHHCEECEEC---------------------------SSSEEEEEGGGSCGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCEEEecC---------------------------CCCeEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 24456666654 57666544 1468999999 34567777777777764
No 98
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.93 E-value=7.8e-25 Score=227.22 Aligned_cols=277 Identities=13% Similarity=0.052 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHh----CC----CcEEEeCCHHHHHHHHHHHhccC--CCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 212 TVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 212 ~~~Le~~LA~l~----g~----e~~i~~sSGs~Ai~~al~all~p--Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
..++++++|+++ |. ++++++++|++|+.+++.+++++ ||+|+++.++|++.... +...|.++..++
T Consensus 61 ~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~ 136 (376)
T 3ezs_A 61 EESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGA----AKFIKAKSLLMP 136 (376)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHH----HHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHH----HHHcCCEEEEcc
Confidence 457777777765 63 56788888889999999999999 99999999999986543 445688888776
Q ss_pred CCCHH----HHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc----cccc------
Q 009167 282 PADME----GLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKAL------ 344 (541)
Q Consensus 282 ~~d~e----~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~----~~~~------ 344 (541)
.++.+ ++++++.+ ++++|++++|+||||.++| +++|+++|+++|+++|+||+|..... ....
T Consensus 137 ~~~~~~~~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 215 (376)
T 3ezs_A 137 LTKENDFTPSLNEKELQ-EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLA 215 (376)
T ss_dssp CCGGGTSCCCCCHHHHH-HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHT
T ss_pred cCCCCCcchhHHhhhcc-CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccc
Confidence 54221 56666665 4899999999999999998 55777789999999999999876332 1111
Q ss_pred ---ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---HHHHHHHHHHHHH
Q 009167 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTAL 418 (541)
Q Consensus 345 ---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---l~~r~~~~~~~a~ 418 (541)
..+.++++.|+||.+|.+| ...|++++++++++.++......+...++..+..+...++. +....++..++.+
T Consensus 216 ~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 294 (376)
T 3ezs_A 216 GNEAFKNVLVIHSLSKRSSAPG-LRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLK 294 (376)
T ss_dssp TCTTCTTEEEEEESTTTTTCGG-GCCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHH
T ss_pred cccccCcEEEEecchhccCCcc-ceeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3567899999999997554 45789999999999988776655555666665555545443 3333444445555
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccC-cCeecccCCcccccccCcc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~-~~iavS~G~~~sl~~~pa~ 497 (541)
.+.+.|+ .+ ..| ..|.++++.++ + ...+.+.|.. .++.+..|..+..-
T Consensus 295 ~l~~~l~---~~---~~~----------------~~~~~~~~~~~-~---~~~~~~~l~~~~gi~v~~g~~~~~~----- 343 (376)
T 3ezs_A 295 LARKIFK---NT---LIY----------------PYSFYVYLPVQ-N---GENFAKTLYQNEGIITLPALYLGRN----- 343 (376)
T ss_dssp HHHHHST---TC---CCC----------------SBSSEEEEECS-C---HHHHHHHHHHHHCCBCEEGGGGCST-----
T ss_pred HHHHHhc---CC---CCC----------------CcceEEEEECC-C---HHHHHHHHHHhCCEEEeCcHHhCCC-----
Confidence 5555554 11 112 25678899986 2 3345555544 57777776553210
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009167 498 MSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 539 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~--e~~edli~dL~~AL~ 539 (541)
+..++.||||++. ++.+..++.|.++++
T Consensus 344 --------------~~~~~~iRis~~~~~~~i~~~l~~l~~~l~ 373 (376)
T 3ezs_A 344 --------------RIGADYVRLALVYDTPLLEKPLEIIETYRE 373 (376)
T ss_dssp --------------TTTTTEEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred --------------CCCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 1236799999975 123334445555543
No 99
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.93 E-value=1.2e-24 Score=226.22 Aligned_cols=290 Identities=14% Similarity=0.172 Sum_probs=199.8
Q ss_pred chhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC---
Q 009167 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e---~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
.+...++++++++++|.+ .++++++|++|+.+++.+++++||+|+++.+.|.+.. +...+...|.++..++.
T Consensus 55 ~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~ 132 (393)
T 3kgw_A 55 LQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMR--AAEIADRIGARVHQMIKKPG 132 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCC
Confidence 456789999999999874 2556677889999999999999999999988876432 22445566888877763
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEEECCcccc
Q 009167 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFI 359 (541)
Q Consensus 283 --~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv~S~sK~l 359 (541)
.|+++|+++++++++++|++++|+||||.+.|+++|.++|++||++||+|++++.+ ........++|+++.|+||++
T Consensus 133 ~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~ 212 (393)
T 3kgw_A 133 EHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVL 212 (393)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTT
T ss_pred CCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccc
Confidence 48999999997634899999999999999999999999999999999999998743 233334567899999999987
Q ss_pred CCCCCceEEEEEeChHHHHHHHHHhh--------------hc---------CCCchHHHHHHHHHhHHH-----HHHHHH
Q 009167 360 GGHNDVLAGSISGSGKLVTQIRNLHH--------------VL---------GGALNPNAAYLIIRGMKT-----LHLRVQ 411 (541)
Q Consensus 360 gg~gd~~gG~lv~~~~li~~l~~~~~--------------~~---------G~~~s~~~a~l~l~~l~t-----l~~r~~ 411 (541)
+++.+ .|++++++++++.+..... .+ ..+.+......+...++. +....+
T Consensus 213 ~~~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 290 (393)
T 3kgw_A 213 NAPPG--ISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWR 290 (393)
T ss_dssp CCCSS--CEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred cCCCc--eeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 55432 6889999999888764221 01 123344333333333332 345566
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCc-CeecccCCccc
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCES 490 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~-~iavS~G~~~s 490 (541)
+..++++.+.+.|++. .+. +..|. +. ...+.+++|.++.+ ....++.+.|... ++.+..|...
T Consensus 291 ~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~- 354 (393)
T 3kgw_A 291 RHREATAHLHKHLQEM-GLK-FFVKD----PE--------IRLPTITTVTVPAG-YNWRDIVSYVLDHFSIEISGGLGP- 354 (393)
T ss_dssp HHHHHHHHHHHHHHHT-TCC-BSSSS----GG--------GBCSSEEEEECCTT-BCHHHHHHHHHHHHCEECBCCCGG-
T ss_pred HHHHHHHHHHHHHHHc-CCe-eccCC----hh--------hcCCeEEEEeCCCC-CCHHHHHHHHHHhCCEEEeCCccc-
Confidence 6677888888888876 332 11111 00 11356788988632 2344556666444 7777765321
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEe-cC----CCHHHHHHHHHHHHhh
Q 009167 491 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 491 l~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv-G~----e~~edli~dL~~AL~~ 540 (541)
..++.|||++ +. ++.+.+++.|.+++++
T Consensus 355 ----------------------~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 387 (393)
T 3kgw_A 355 ----------------------TEERVLRIGLLGYNATTENVDRVAEALREALQH 387 (393)
T ss_dssp ----------------------GTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------CCCCEEEEEecccCCCHHHHHHHHHHHHHHHHh
Confidence 1257899998 64 3455566666666654
No 100
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.93 E-value=2.5e-24 Score=225.37 Aligned_cols=280 Identities=14% Similarity=0.132 Sum_probs=190.5
Q ss_pred hhHHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 210 PTTVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g----~e~~i~~sSGs~Ai~~al~all~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+...+++++|++++ | .++++++++|++|+.+++.+++++| |+|+++.|+|++.... ++..|.++..+
T Consensus 76 ~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~----~~~~g~~~~~v 151 (398)
T 3ele_A 76 QGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVF----VNAAGARLVEV 151 (398)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHH----HHHTTCEEEEE
T ss_pred CCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHH----HHHcCCEEEEE
Confidence 33456777777664 3 2467777778899999999999999 9999999999986543 34568888888
Q ss_pred CCC------CHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHh------CCCEEEEeCCCCCCCc-----
Q 009167 281 DPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK------KGAIVCIDGTFATPLN----- 340 (541)
Q Consensus 281 d~~------d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~------~gi~lIvDea~a~~~~----- 340 (541)
+.+ |+++|++++++ ++++|++++|+||||.+++ +++|+++|++ +|+++|+|++|+....
T Consensus 152 ~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~ 230 (398)
T 3ele_A 152 PADTEHFQIDFDALEERINA-HTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKV 230 (398)
T ss_dssp CCCTTTSSCCHHHHHHTCCT-TEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCC
T ss_pred ecCCcCCcCCHHHHHHHhCc-CCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCc
Confidence 643 89999999987 4999999999999999998 6677789998 9999999999875332
Q ss_pred -ccccccCCcEEEECCccccCCCCCceEEEEEeChHH------HHHHHHHhhhcC-CCchHHHHHHHHHhHHHHHHHHHH
Q 009167 341 -QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL------VTQIRNLHHVLG-GALNPNAAYLIIRGMKTLHLRVQQ 412 (541)
Q Consensus 341 -~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l------i~~l~~~~~~~G-~~~s~~~a~l~l~~l~tl~~r~~~ 412 (541)
......+.++++.|+||.++.+| ...|++++++++ .+.+.......+ ...++..+..+...++... ..++
T Consensus 231 ~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~ 308 (398)
T 3ele_A 231 PFVTKYYDNTLVCYSYSKSLSLPG-ERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-DINA 308 (398)
T ss_dssp CCGGGTCSSEEEEEESTTTSSCTT-TCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-CHHH
T ss_pred CChHhhcCCeEEEEehhhcCCCcc-ceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-HHHH
Confidence 11122356799999999998555 357888887763 333333333322 2334444444443443221 2345
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCccccc
Q 009167 413 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 492 (541)
Q Consensus 413 ~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~ 492 (541)
..++++.+.+.|++. .+. +..|. .|.++++.+++. ....+.+.|...++.+..|..+.
T Consensus 309 ~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~-- 366 (398)
T 3ele_A 309 YKENRDLLYEGLTRI-GYH-CFKPD----------------GAFYMFVKALED--DSNAFCEKAKEEDVLIVAADGFG-- 366 (398)
T ss_dssp HHHHHHHHHHHHHHH-TCC-EECCS----------------BSSEEEEECSSS--CHHHHHHHHHTTTEECEESGGGT--
T ss_pred HHHHHHHHHHHHHHc-CCe-ecCCC----------------eeEEEEEEcCCC--CHHHHHHHHHHCCEEEeCccccC--
Confidence 556777788888765 222 22221 344588988743 34566777777788888775431
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009167 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~ 539 (541)
.++.+|||++.. +.++.++.|.++++
T Consensus 367 ---------------------~~~~iRis~~~~~e~i~~~l~~l~~~l~ 394 (398)
T 3ele_A 367 ---------------------CPGWVRISYCVDREMIKHSMPAFEKIYK 394 (398)
T ss_dssp ---------------------CTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred ---------------------CCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 146899999842 23444555555554
No 101
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.93 E-value=4.9e-24 Score=225.77 Aligned_cols=274 Identities=15% Similarity=0.147 Sum_probs=190.3
Q ss_pred hHHHHHHHHHHHh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----e-~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+++++|++++ |. + .++++++|++|+.+++.+++++||+|+++.++|++....+ ...|.++..++
T Consensus 78 g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~ 153 (429)
T 1yiz_A 78 GHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMV----KAAGGIPRFIP 153 (429)
T ss_dssp CCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEE
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH----HHcCCEEEEEe
Confidence 3567788888775 52 4 5666666779999999999999999999999999966443 34577766664
Q ss_pred C---------------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc---
Q 009167 282 P---------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (541)
Q Consensus 282 ~---------------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~--- 340 (541)
. .|+++|++++++ ++++|++++|+||||.+++ +++|+++|++||++||+||+|.....
T Consensus 154 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~ 232 (429)
T 1yiz_A 154 LKPNKTGGTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPF 232 (429)
T ss_dssp CBCCCSSSSEEGGGCBCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTS
T ss_pred CCcccccccccccCcccCHHHHHHHhcc-CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCC
Confidence 2 478999999976 5999999999999999996 88999999999999999999875321
Q ss_pred ----cccc--ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH---------
Q 009167 341 ----QKAL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT--------- 405 (541)
Q Consensus 341 ----~~~~--~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t--------- 405 (541)
...+ ..+.|+++.|+||.++++| ...|++++++++++.+...........++..+..+...++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 311 (429)
T 1yiz_A 233 EHIRICTLPGMWERTITIGSAGKTFSLTG-WKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPE 311 (429)
T ss_dssp CCCCGGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEESCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTT
T ss_pred CCcChhhccCCcCceEEEecchhccCCCC-cceEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchH
Confidence 1112 2467999999999998655 45799999999988887655433334455444444444444
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-----------HHHHHH
Q 009167 406 --LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-----------TATIKF 472 (541)
Q Consensus 406 --l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-----------~~~~~~ 472 (541)
+....++..++++.+.+.|+++ .+. +..|. .|.++++++++.. ....++
T Consensus 312 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 373 (429)
T 1yiz_A 312 CYFNSISGELMAKRDYMASFLAEV-GMN-PTVPQ----------------GGYFMVADWSSLDSKVDLTQETDARKDYRF 373 (429)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHH-TCE-EEECS----------------BSSEEEEECCSSCTTTTCCSSSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCC----------------cceEEEEEcccccccccccccccCCCHHHH
Confidence 3333344556677777788765 333 22221 3568999987420 234566
Q ss_pred HHHcc-CcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009167 473 IDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 473 l~~L~-~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
.+.|. ..++.+..|..+... + + .+..++.||||++.
T Consensus 374 ~~~l~~~~gv~v~~g~~f~~~--~----~----------~~~~~~~iRis~~~ 410 (429)
T 1yiz_A 374 TKWMTKSVGLQGIPPSAFYSE--P----N----------KHLGEDFVRYCFFK 410 (429)
T ss_dssp HHHHHHHTSEECBCGGGGSCG--G----G----------GGGTTTEEEEECCS
T ss_pred HHHHHHhCCEEEeCchHhCCC--c----c----------cCCCCCeEEEEecC
Confidence 66653 568877776543210 0 0 01125799999995
No 102
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.93 E-value=2.7e-24 Score=224.22 Aligned_cols=293 Identities=14% Similarity=0.129 Sum_probs=197.7
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e---~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
|+.+..+..+++++++++++|.+ .++++++|++|+.+++.+++++||+|+++.++|++.. +...++..|.++..+
T Consensus 46 ~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v 123 (393)
T 2huf_A 46 LHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDR--SADMATRYGADVRVV 123 (393)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHH--HHHHHHHcCCeeEEE
Confidence 33344567889999999999984 2455677789999999999999999999999998842 223345568888877
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcEEEEC
Q 009167 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (541)
Q Consensus 281 d~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDivv~S 354 (541)
+. .|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|+++..+.. ......++|+++.|
T Consensus 124 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s 203 (393)
T 2huf_A 124 KSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTG 203 (393)
T ss_dssp ECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECC
T ss_pred eCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEEC
Confidence 63 4899999999751389999999999999999999999999999999999999765322 22234578999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHh----h-h---------cC---------CCchHHHHHHHHHhHHH-----H
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH----H-V---------LG---------GALNPNAAYLIIRGMKT-----L 406 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~----~-~---------~G---------~~~s~~~a~l~l~~l~t-----l 406 (541)
+||+++|+.+ .|++++++++++.++... . . ++ ++.+......+...++. +
T Consensus 204 ~sK~l~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 281 (393)
T 2huf_A 204 SQKVLGAPPG--ITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGL 281 (393)
T ss_dssp SSSTTCCCSS--CEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCH
T ss_pred CCcccccCCC--eEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCH
Confidence 9998654332 288888999888876431 0 0 11 12333332222223322 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccC-cCeeccc
Q 009167 407 HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSF 485 (541)
Q Consensus 407 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~-~~iavS~ 485 (541)
....++..++++++.+.|++. ++. +..|. . ...+.+++|.++.+ ....++.+.|.. .++.++.
T Consensus 282 ~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-----~--------~~~~~~~~~~~~~~-~~~~~~~~~L~~~~gi~v~~ 345 (393)
T 2huf_A 282 PALIARHEDCAKRLYRGLQDA-GFE-LYADP-----K--------DRLSTVTTIKVPQG-VDWLKAAQYAMKTYLVEISG 345 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCC-BSSCG-----G--------GBCTTEEEEECCTT-CCHHHHHHHHHHHHCEECBC
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCe-eccCc-----c--------ccCCcEEEEEcCCC-CCHHHHHHHHHHhCCEEEec
Confidence 445566667888888888875 332 11110 0 01345888988622 123455666543 4777766
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe-cCC----CHHHHHHHHHHHHh
Q 009167 486 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GVE----DFEDLKADVLQALH 539 (541)
Q Consensus 486 G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv-G~e----~~edli~dL~~AL~ 539 (541)
|..+ ..++.|||++ +.. +.+.+++.|.++++
T Consensus 346 g~~~-----------------------~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~ 381 (393)
T 2huf_A 346 GLGP-----------------------TAGQVFRIGLMGQNATTERVDRVLQVFQEAVA 381 (393)
T ss_dssp CCGG-----------------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred Cccc-----------------------ccCCEEEEEcccCcCCHHHHHHHHHHHHHHHH
Confidence 5421 0257899999 643 24455555555554
No 103
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.93 E-value=2.5e-24 Score=226.04 Aligned_cols=287 Identities=17% Similarity=0.200 Sum_probs=199.1
Q ss_pred hHHHHHHHHHHHh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 211 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...++++++|+++ |. +.++++++|++|+.+++.+++++||+|+++.++|++.... +...|.++..++.
T Consensus 76 ~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~v~~ 151 (407)
T 2zc0_A 76 GIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLA----FEQLGAKIEGVPV 151 (407)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH----HHTTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHH----HHHcCCEEEEccc
Confidence 4678999999988 72 4566666668999999999999999999999999986543 3456777777654
Q ss_pred ----CCHHHHHHhcc----C-CCceEEE-EeCCCCCCCccccHH---HHHHHHHhCCCEEEEeCCCCCCCc-----cccc
Q 009167 283 ----ADMEGLEAALN----N-NNVSLFF-TESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLN-----QKAL 344 (541)
Q Consensus 283 ----~d~e~Le~al~----~-~~tklV~-lesP~NPtG~i~dl~---~Ia~la~~~gi~lIvDea~a~~~~-----~~~~ 344 (541)
.|+++|+++++ + .++++|+ +++|+||||.++|++ +|+++|+++|+++|+|++|+.+.. ....
T Consensus 152 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 231 (407)
T 2zc0_A 152 DNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLK 231 (407)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGG
T ss_pred CCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChh
Confidence 37999999887 5 2488874 789999999999976 999999999999999999875432 1111
Q ss_pred cc---CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH-------HHHHHHHHH
Q 009167 345 SL---GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT-------LHLRVQQQN 414 (541)
Q Consensus 345 ~~---gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t-------l~~r~~~~~ 414 (541)
.+ +.++++.|+||+++ +| ..+|++++++++++.++......+...++.....+...++. +....++..
T Consensus 232 ~~~~~~~~i~~~s~sK~~~-~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 309 (407)
T 2zc0_A 232 ALDNEGRVIVAGTLSKVLG-TG-FRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYK 309 (407)
T ss_dssp GGCSSCCEEEEEESTTTTC-TT-SCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHH
T ss_pred hcCCCCCEEEEcccccccC-CC-cceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 22 45689999999998 44 45799999999998888765544433455554444444432 222334445
Q ss_pred HHHHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCc-CeecccCCccccc
Q 009167 415 STALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIV 492 (541)
Q Consensus 415 ~~a~~la~~L~~-~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~-~iavS~G~~~sl~ 492 (541)
++++.+.+.|++ .|.+. +..|. .|.++++.++.+ ....++.+.|... ++.+..|..+..
T Consensus 310 ~~~~~l~~~L~~~~~~~~-~~~~~----------------~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~~~~- 370 (407)
T 2zc0_A 310 EKRDIMLKALENHLPNAE-FTKPI----------------AGMFVMFFLPEG-ADGISFANELMEREGVVVVPGKPFYT- 370 (407)
T ss_dssp HHHHHHHHHHHHHCTTSC-BCCCS----------------BSSEEEEECSTT-CCHHHHHHHHHHHTCEECBCSGGGCS-
T ss_pred HHHHHHHHHHHHhCCCCE-EecCC----------------CcEEEEEEcCCC-CCHHHHHHHHHHhCCeEEECchhccC-
Confidence 667778888876 34432 11221 456899998642 1244566666555 777777654321
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHhh
Q 009167 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV---EDFEDLKADVLQALHA 540 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~---e~~edli~dL~~AL~~ 540 (541)
+ +..++.+|||++. ++.+.+++.|.+++++
T Consensus 371 --~----------------~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 403 (407)
T 2zc0_A 371 --D----------------ESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKE 403 (407)
T ss_dssp --S----------------SCCTTEEEEECSSSCTTHHHHHHHHHHHHHHH
T ss_pred --C----------------CCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 0 0125789999986 3456667777777654
No 104
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.93 E-value=3.1e-24 Score=224.58 Aligned_cols=306 Identities=14% Similarity=0.094 Sum_probs=214.2
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC--
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-- 283 (541)
..++...+||++||+++|.+++++++||++|+.+++.++ +++||+|+++.++|+++...+ ...|.++.+++.+
T Consensus 53 ~~~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~ 128 (391)
T 3dr4_A 53 SVGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSV----TYCGATPVLVDNDPR 128 (391)
T ss_dssp SCSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECBCTT
T ss_pred CCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHHH----HHCCCEEEEEecCcc
Confidence 347889999999999999999999999999999999999 999999999999999876443 3458888888754
Q ss_pred ----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccccccc--CCcEEEECCc-
Q 009167 284 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSL--GADLVLHSAT- 356 (541)
Q Consensus 284 ----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~--gaDivv~S~s- 356 (541)
|+++|++++++ ++++|+ |+||||.+.|+++|.++|+++|++||+|++|+.+........ -.|+++.|++
T Consensus 129 ~~~~d~~~l~~~~~~-~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~ 204 (391)
T 3dr4_A 129 TFNLDAAKLEALITP-RTKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFG 204 (391)
T ss_dssp TCSBCGGGSGGGCCT-TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBT
T ss_pred ccCcCHHHHHHhcCC-CceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCC
Confidence 78999999987 488887 578999999999999999999999999999986543322222 2478888865
Q ss_pred -cccCCCCCceEEEEEeC-hHHHHHHHHHhhhc--------------CCCchHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009167 357 -KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL--------------GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 420 (541)
Q Consensus 357 -K~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~--------------G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~l 420 (541)
|++++ + .+|+++.+ +++.+.++...... ...+.+..+.+.+..++.+....++..++++++
T Consensus 205 ~K~l~~-g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l 281 (391)
T 3dr4_A 205 NAIITT-G--EGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWY 281 (391)
T ss_dssp TSSSCC-B--SCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcCCc-C--CeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 3 36777665 45777666543211 123455666555555666666677777888888
Q ss_pred HHHHHhCCCceEEeC--CCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHHHHccCcCeecccCCcccccccCcc
Q 009167 421 AKILEAHPKVKRVHY--PGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 421 a~~L~~~p~v~~v~~--P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~ 497 (541)
.+.|++. .+..... +... ...+.++++.++.. .....++.+.|...++.++.|.. .+.+.|..
T Consensus 282 ~~~L~~~-g~~~~~~~~~~~~------------~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~-p~~~~~~~ 347 (391)
T 3dr4_A 282 EQKLARL-GNRVTKPHVALTG------------RHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFH-PMHIMPPY 347 (391)
T ss_dssp HHHHGGG-TTSEECCCCCTTS------------CCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCC-CGGGSGGG
T ss_pred HHHhhcC-CccccCcCCCCCC------------cceeEEEEEEECCccchhHHHHHHHHHHCCCceeecCC-ccccChhh
Confidence 8888876 4432222 1100 11234677888641 12345667777666887776532 22333322
Q ss_pred ccc--cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 498 MSY--WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 498 ~~~--~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
..+ ..++.... +.++.|||+++...+++.++.+.++|+++
T Consensus 348 ~~~~~~~~~~~~~----~~~~~lrl~~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 348 AHLATDDLKIAEA----CGVDGLNLPTHAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp GGGCCTTCHHHHH----HHHHEEEECCCTTCCHHHHHHHHHHHHTT
T ss_pred hhcCcCCChHHHH----HHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 111 11221111 12468999999988888889998888763
No 105
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.93 E-value=1.2e-24 Score=228.94 Aligned_cols=212 Identities=18% Similarity=0.262 Sum_probs=168.9
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-----
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----- 282 (541)
.+...+++++||+++|.++.+++++|++|+.+++.++ +++||+|+++.++|+++... +...|+++.+++.
T Consensus 62 ~~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~ 137 (399)
T 2oga_A 62 GPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIASWLA----VSATGATPVPVEPHEDHP 137 (399)
T ss_dssp SHHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEECBCSSSS
T ss_pred chhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHH----HHHCCCEEEEEecCCCCC
Confidence 4778999999999999988999999999999999999 89999999999999986643 3445888887763
Q ss_pred -CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccC--CcEEEECC--cc
Q 009167 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSA--TK 357 (541)
Q Consensus 283 -~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~g--aDivv~S~--sK 357 (541)
.|+++|++++++ ++++|+ |+||||.+.|+++|.++|+++|++||+|++|+.+...+....+ .|+++.|+ +|
T Consensus 138 ~~d~~~l~~~i~~-~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK 213 (399)
T 2oga_A 138 TLDPLLVEKAITP-RTRALL---PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGK 213 (399)
T ss_dssp SBCHHHHHHHCCT-TEEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTTS
T ss_pred CcCHHHHHHhcCC-CCeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCCc
Confidence 279999999987 488887 5789999999999999999999999999999865432322333 69999999 69
Q ss_pred ccCCCCCceEEEEEeC-hHHHHHHHHHhhhc----------C--CCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 009167 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHVL----------G--GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKIL 424 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~----------G--~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L 424 (541)
+++++| .+|+++.+ ++++++++...... | ..+++..++++...++.+....++..++++++.+.|
T Consensus 214 ~~~~~G--~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L 291 (399)
T 2oga_A 214 NLGCFG--DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGL 291 (399)
T ss_dssp SSCCSS--CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred cCCcCC--ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999866 47888875 78888777644321 1 245677777777777777666677777788888888
Q ss_pred HhCCCc
Q 009167 425 EAHPKV 430 (541)
Q Consensus 425 ~~~p~v 430 (541)
++.|.+
T Consensus 292 ~~~~g~ 297 (399)
T 2oga_A 292 AGLPGI 297 (399)
T ss_dssp TTCTTC
T ss_pred ccCCCc
Confidence 776554
No 106
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.93 E-value=4.5e-24 Score=226.21 Aligned_cols=291 Identities=13% Similarity=0.152 Sum_probs=195.9
Q ss_pred cCCCCchh-HHHHHHHHHHHhC--------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhccc
Q 009167 204 YGRYGNPT-TVVVEEKMSALEG--------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 204 Y~R~~~p~-~~~Le~~LA~l~g--------~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~ 272 (541)
..+|+++. ..+|++++|++++ . +..+++++|++++.+++.+++++||+|+++.++|++... .....
T Consensus 76 ~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~ 152 (428)
T 1iay_A 76 IANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNR---DLRWR 152 (428)
T ss_dssp HHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHH---HTTTT
T ss_pred hcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHH---HHHHh
Confidence 35566664 7899999999986 3 345555555699999999999999999999999998542 12345
Q ss_pred CCeEEEEeCCC-------CHHHHHHhccC-----CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCC
Q 009167 273 MGITATVIDPA-------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 273 ~Gi~v~~vd~~-------d~e~Le~al~~-----~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~ 337 (541)
.|+++..++.+ |+++|++++++ .++++|++++|+||||.++| +++|+++|+++|++||+||+|..
T Consensus 153 ~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~ 232 (428)
T 1iay_A 153 TGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAA 232 (428)
T ss_dssp TCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGG
T ss_pred cCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccc
Confidence 68888887642 78999988863 24899999999999999999 88999999999999999999875
Q ss_pred CCc-----cc--ccccC-------Cc--EEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHH
Q 009167 338 PLN-----QK--ALSLG-------AD--LVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLII 400 (541)
Q Consensus 338 ~~~-----~~--~~~~g-------aD--ivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l 400 (541)
... .. .+... .| +++.|+||.+|.+| +..|++++ ++++++.++.....++ .++..+.++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G-lr~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~ 309 (428)
T 1iay_A 233 TVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG-FRVGIIYSFNDDVVNCARKMSSFGL--VSTQTQYFLA 309 (428)
T ss_dssp GCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG-GCEEEEEESCHHHHHHHHHHHTTSC--CCHHHHHHHH
T ss_pred cccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC-ceEEEEEeCCHHHHHHHHHHHhccc--CCHHHHHHHH
Confidence 221 11 11112 56 89999999997555 44688887 6788888876544332 3344443333
Q ss_pred HhHHH-------HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-----HHH
Q 009167 401 RGMKT-------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LTA 468 (541)
Q Consensus 401 ~~l~t-------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-----~~~ 468 (541)
..++. +....++..++++.+.+.|+++ .+. + ++. ..|.++++.++.. ...
T Consensus 310 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~---------------~~g~~~~~~~~~~~~~~~~~~ 371 (428)
T 1iay_A 310 AMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIK-C-LKN---------------NAGLFCWMDLRPLLRESTFDS 371 (428)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-B-CCC---------------SSSSEEEEECGGGCSSSSHHH
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-c-cCC---------------CeeEEEEEechhhcCCCchhH
Confidence 33322 2333445556777888888775 331 1 111 1467889998642 124
Q ss_pred HHHHHHHccC-cCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHHHHHh
Q 009167 469 TIKFIDALKI-PYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED---FEDLKADVLQALH 539 (541)
Q Consensus 469 ~~~~l~~L~~-~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~---~edli~dL~~AL~ 539 (541)
...+.+.|.. .++.+..|+.+.. ..++.+||+++..+ .+.+++.|.++++
T Consensus 372 ~~~l~~~l~~~~gi~v~~~~~~~~---------------------~~~~~iRis~~~~~~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 372 EMSLWRVIINDVKLNVSPGSSFEC---------------------QEPGWFRVCFANMDDGTVDIALARIRRFVG 425 (428)
T ss_dssp HHHHHHHHHHTSCEECEEGGGGTC---------------------SSSSEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeCchhhCC---------------------CCCCEEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 4567777754 4777776644211 02568999999322 3344455555544
No 107
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.93 E-value=2.9e-24 Score=227.73 Aligned_cols=288 Identities=13% Similarity=0.061 Sum_probs=193.7
Q ss_pred hhHHHHHHHHHHHhCCC--cEEEeCCHHHHH--HHHHHHhcc--C----------CCEEEEcCCCCcchHHHHHhhcccC
Q 009167 210 PTTVVVEEKMSALEGAE--STVIMASGMSAS--TVMLLALVP--A----------GGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai--~~al~all~--p----------Gd~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
....+||++||++++.+ ++++++++++++ .+++.+++. + ||+|+++.|+|.+.... ++..
T Consensus 78 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~----~~~~ 153 (427)
T 3ppl_A 78 DGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSI----TERF 153 (427)
T ss_dssp SCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHH----HHHT
T ss_pred CCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHH----HHHc
Confidence 35679999999999873 455555666899 578888877 6 99999999999986644 3445
Q ss_pred CeEEEEeCC----CCHHHHHHhccCCCceEEEEe-CCCCCCCccccHH---HHHHHH-HhCCCEEEEeCCCCCCCcc---
Q 009167 274 GITATVIDP----ADMEGLEAALNNNNVSLFFTE-SPTNPFLRCVDVK---LVSDLC-HKKGAIVCIDGTFATPLNQ--- 341 (541)
Q Consensus 274 Gi~v~~vd~----~d~e~Le~al~~~~tklV~le-sP~NPtG~i~dl~---~Ia~la-~~~gi~lIvDea~a~~~~~--- 341 (541)
|.++..++. .|+++|+++++..++++|+++ +|+||||.++|.+ +|+++| +++|++||+|++|+.....
T Consensus 154 g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~ 233 (427)
T 3ppl_A 154 GFEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEF 233 (427)
T ss_dssp TCEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCC
Confidence 777776653 289999999953359999875 7899999999977 888888 9999999999998753211
Q ss_pred ----ccc-------ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH-----
Q 009167 342 ----KAL-------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----- 405 (541)
Q Consensus 342 ----~~~-------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t----- 405 (541)
+.. ..+.++++.|+||+++ +| ...|++++++++++.++......+...+...+..+...++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 311 (427)
T 3ppl_A 234 PEVIDIVGLGEAAGNPNRFWAFTSTSKITL-AG-AGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVR 311 (427)
T ss_dssp CCCCCHHHHHHHTTCTTSEEEEEESTTTSC-TT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHH
T ss_pred CCccchhhhhhccCCCCcEEEEechhhccC-cC-ccEEEEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHH
Confidence 111 2357799999999944 33 45799999999999988776655555555554444333332
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhC-C---CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCc
Q 009167 406 --LHLRVQQQNSTALRMAKILEAH-P---KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP 479 (541)
Q Consensus 406 --l~~r~~~~~~~a~~la~~L~~~-p---~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~ 479 (541)
+....+...++.+.+.+.|.++ + .+ .+..|. .|.++++.+++. ....+.+.|...
T Consensus 312 ~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~-~~~~p~----------------~g~~~~~~~~~~--~~~~~~~~l~~~ 372 (427)
T 3ppl_A 312 AVMRKHAASLAPKFNKVLEILDSRLAEYGVA-QWTVPA----------------GGYFISLDVVPG--TASRVAELAKEA 372 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGTCC-EECCCS----------------BSSCEEEECSTT--CHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCce-EEeCCC----------------ccEEEEEECCcc--hHHHHHHHHHHC
Confidence 2222223334555566666442 2 22 222231 467899999753 345666777667
Q ss_pred CeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHHh
Q 009167 480 YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQALH 539 (541)
Q Consensus 480 ~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~---edli~dL~~AL~ 539 (541)
++.++.|+.+.... .+..++.||||++..+. ++.++.|.++++
T Consensus 373 gv~v~~~g~~~~~~-----------------~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~ 418 (427)
T 3ppl_A 373 GIALTGAGSSYPLR-----------------QDPENKNLRLAPSLPPVEELEVAMDGVATCVL 418 (427)
T ss_dssp TEECCCTTTTSGGG-----------------CCTTSCEEEECCSSSCHHHHHHHHHHHHHHHH
T ss_pred CCEEecCcCcCCCC-----------------CCCCCCeEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 88888854321100 01136799999987543 344555555554
No 108
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.93 E-value=1.6e-23 Score=218.90 Aligned_cols=270 Identities=16% Similarity=0.068 Sum_probs=186.2
Q ss_pred HHH-HHHHHHHHh----C--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 212 TVV-VEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 212 ~~~-Le~~LA~l~----g--~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
..+ ++++||+++ | . +.++++++|++|+.+++.+++++||+|+++.|+|++....+ ...|.++..++.
T Consensus 65 ~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~v~~ 140 (390)
T 1d2f_A 65 KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAI----EGNQRTVMPVAL 140 (390)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHH----HHTTCEEEEEEC
T ss_pred ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHH----HHCCCEEEEeec
Confidence 445 777887765 4 2 45777777789999999999999999999999999866443 345777766653
Q ss_pred --------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc-----cccccc
Q 009167 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSL 346 (541)
Q Consensus 283 --------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~-----~~~~~~ 346 (541)
.|+++|++++++.++++|++++|+||||.++| +++|+++|+++|++||+||+|+.... .....+
T Consensus 141 ~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 220 (390)
T 1d2f_A 141 EKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNV 220 (390)
T ss_dssp EECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGT
T ss_pred ccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHc
Confidence 48999999997535999999999999999998 78999999999999999999876432 111222
Q ss_pred C--C-cEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhh-hcC-CCchHHHHHHHHHhHH----HHHHHHHHHHHH
Q 009167 347 G--A-DLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHH-VLG-GALNPNAAYLIIRGMK----TLHLRVQQQNST 416 (541)
Q Consensus 347 g--a-Divv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~-~~G-~~~s~~~a~l~l~~l~----tl~~r~~~~~~~ 416 (541)
. . |. +.|+||.++.+| ...|+++++ +++++.++.... ... ++.++..++.+...++ .+....++..++
T Consensus 221 ~~~~~d~-~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 298 (390)
T 1d2f_A 221 ARGDWAL-LTSGSKSFNIPA-LTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDN 298 (390)
T ss_dssp CCSSEEE-EECSHHHHTCGG-GCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred chhhHhh-ccCccHhhcccC-hhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 2 2 67 999999998554 346888874 788888876554 223 2445555444444443 233444555677
Q ss_pred HHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCccccccc
Q 009167 417 ALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQ 494 (541)
Q Consensus 417 a~~la~~L~~-~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~ 494 (541)
++.+.+.|++ .|.+. +..| ..|.+++++++.......++.+.|. ..++.+..|..+..
T Consensus 299 ~~~l~~~L~~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~--- 358 (390)
T 1d2f_A 299 LTYIADKMNAAFPELN-WQIP----------------QSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGE--- 358 (390)
T ss_dssp HHHHHHHHHHHCSSCC-CCCC----------------SBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCG---
T ss_pred HHHHHHHHHhhCCCCE-EecC----------------CccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCC---
Confidence 7888888887 55542 1111 0234567888631012456677776 56888777654321
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCC
Q 009167 495 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 525 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e 525 (541)
..++.+|||++..
T Consensus 359 ------------------~~~~~~Ris~~~~ 371 (390)
T 1d2f_A 359 ------------------EGRGFVRLNAGCP 371 (390)
T ss_dssp ------------------GGTTEEEEECCSC
T ss_pred ------------------CCCCeEEEEecCC
Confidence 0257899999974
No 109
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.93 E-value=5.7e-24 Score=222.03 Aligned_cols=304 Identities=17% Similarity=0.187 Sum_probs=212.6
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
..+...++|++||+++|.+++++++||++|+.+++.++ +++||+|+++.++|+++... +...|+++..++.
T Consensus 37 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~ 112 (393)
T 1mdo_A 37 TGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNM----IVLLGANPVMVDVDRDT 112 (393)
T ss_dssp SSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHH----HHHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHH----HHHCCCEEEEEeccCCc
Confidence 46789999999999999988999999999999999999 99999999999999987643 3456888888763
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccC-CcEEEECCc--c
Q 009167 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG-ADLVLHSAT--K 357 (541)
Q Consensus 283 --~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~g-aDivv~S~s--K 357 (541)
.|+++|++++++ ++++|+++ ||+|.+.|+++|.++|+++|+++|+|++|+.+........+ .|+++.|+| |
T Consensus 113 ~~~d~~~l~~~l~~-~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K 188 (393)
T 1mdo_A 113 LMVTPEHIEAAITP-QTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIK 188 (393)
T ss_dssp CCBCHHHHHHHCCT-TEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTS
T ss_pred CCCCHHHHHHhcCC-CceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCC
Confidence 379999999987 59999874 58999999999999999999999999999865332222345 899999999 9
Q ss_pred ccCCCCCceEEEEEeC-hHHHHHHHHHhhh----------------------cC--CCchHHHHHHHHHhHHHHHHHHHH
Q 009167 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV----------------------LG--GALNPNAAYLIIRGMKTLHLRVQQ 412 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~-~~li~~l~~~~~~----------------------~G--~~~s~~~a~l~l~~l~tl~~r~~~ 412 (541)
+++|+ .+|+++.+ +++++.++..... .| ..+++..+.+++..++.+....++
T Consensus 189 ~l~~~---~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~ 265 (393)
T 1mdo_A 189 NITCA---EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNAR 265 (393)
T ss_dssp SSCSS---SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHH
T ss_pred ccccc---cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99764 37888886 7888887654321 01 124566666666667767677777
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC---CHHHHHHHHHHccCcCeecccCCcc
Q 009167 413 QNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLTATIKFIDALKIPYIAPSFGGCE 489 (541)
Q Consensus 413 ~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~---~~~~~~~~l~~L~~~~iavS~G~~~ 489 (541)
..++++++.+.|++.+ ++....|.. . ..+.+.+++|.++. + ....++.+.|...++.++.|..+
T Consensus 266 ~~~~~~~l~~~L~~~~-~~~~~~~~~-~----------~~~~~~~~~v~~~~~~~~-~~~~~l~~~l~~~gi~v~~~~~~ 332 (393)
T 1mdo_A 266 RAAIAAQYHQAMADLP-FQPLSLPSW-E----------HIHAWHLFIIRVDEARCG-ITRDALMASLKTKGIGTGLHFRA 332 (393)
T ss_dssp HHHHHHHHHHHHHTSS-CEECCCCSS-C----------EECCCSCEEEECCHHHHS-SCHHHHHHHHHHTTBCCBCCCCC
T ss_pred HHHHHHHHHHHHhcCC-cccccCCCC-C----------CCceeEEEEEEecccccc-cCHHHHHHHHHhCCCCcccccCc
Confidence 7788888999998876 432111210 0 01234578898862 1 13456667776678887776532
Q ss_pred cccccCcccc---ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 490 SIVDQPAIMS---YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 490 sl~~~pa~~~---~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.. ..|.... ...++...+ +.++.|||+++...+++.++.+.++|++
T Consensus 333 ~~-~~~~~~~~~~~~~~~~~~~----~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 381 (393)
T 1mdo_A 333 AH-TQKYYRERFPTLTLPDTEW----NSERICSLPLFPDMTESDFDRVITALHQ 381 (393)
T ss_dssp GG-GSHHHHHHSTTCCCHHHHH----HHTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred cc-cChhhhccCCccCChhHHH----HHhCEEEecCCCCCCHHHHHHHHHHHHH
Confidence 10 0010000 000111000 1246899999977666667777666653
No 110
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=7.7e-24 Score=223.23 Aligned_cols=285 Identities=14% Similarity=0.137 Sum_probs=194.6
Q ss_pred hHHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 211 TTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~--------e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...++++++|++++. ++++++++|++|+.+++.+++++||+|+++.++|++.... +...|.++..++.
T Consensus 80 g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~ 155 (409)
T 2gb3_A 80 GIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAF----AKIAGVKLIPVTR 155 (409)
T ss_dssp CCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH----HHHHTCEEEEEEC
T ss_pred CcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHcCCEEEEecc
Confidence 467889999988742 4677778888999999999999999999999999986543 3345777777765
Q ss_pred CC------HHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc----ccccc--cC
Q 009167 283 AD------MEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALS--LG 347 (541)
Q Consensus 283 ~d------~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~----~~~~~--~g 347 (541)
++ +++|++++++ ++++|++++|+||||.+++ +++|.++|+++|++||+|++|+.+.. ...+. .+
T Consensus 156 ~~~~~~~~~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~ 234 (409)
T 2gb3_A 156 RMEEGFAIPQNLESFINE-RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESD 234 (409)
T ss_dssp CGGGTSCCCTTGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCT
T ss_pred CCCCCCccHHHHHHhhCc-CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCC
Confidence 42 7888888877 5999999999999999975 78999999999999999999876432 11121 35
Q ss_pred CcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHH
Q 009167 348 ADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAK 422 (541)
Q Consensus 348 aDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a~~la~ 422 (541)
.|+++.|+||+++.+| ..+|++++++ ++++.++....... ..++...+.+...++ .+....++..++++.+.+
T Consensus 235 ~~i~~~s~sK~~g~~G-~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 312 (409)
T 2gb3_A 235 KVVVIDSVSKKFSACG-ARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLK 312 (409)
T ss_dssp TEEEEEESTTTTTCGG-GCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEecchhccCCcc-ceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999997554 3578999988 89888877655443 445555444444442 234444555677778888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCc------CeecccCCcccccccCc
Q 009167 423 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP------YIAPSFGGCESIVDQPA 496 (541)
Q Consensus 423 ~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~------~iavS~G~~~sl~~~pa 496 (541)
.|+++ ++..+..| ..|.++++.+++ ....++.+.|... ++.+..|..+.. .
T Consensus 313 ~L~~~-g~~~~~~~----------------~~~~~~~~~~~~--~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~--~-- 369 (409)
T 2gb3_A 313 KLEEH-GLKRFTKP----------------SGAFYITAELPV--EDAEEFARWMLTDFNMDGETTMVAPLRGFYL--T-- 369 (409)
T ss_dssp HHHHT-TCCCBCCC----------------SBSSEEEEECSS--SCHHHHHHHHHHSCCBTTEEEECEEGGGGCS--S--
T ss_pred HHHHc-CceeeeCC----------------CeeEEEEEEeCC--CCHHHHHHHHHhccccccCcEEEeCchHhCC--C--
Confidence 88775 33210111 135577778862 1234555655433 777666543211 0
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009167 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~ 539 (541)
.+..++.+||+++.. +.+..++.|.++++
T Consensus 370 --------------~~~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 400 (409)
T 2gb3_A 370 --------------PGLGKKEIRIACVLEKDLLSRAIDVLMEGLK 400 (409)
T ss_dssp --------------TTTTSSEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred --------------CCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 012357999999931 22344455555544
No 111
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.93 E-value=3.6e-24 Score=225.73 Aligned_cols=283 Identities=11% Similarity=0.082 Sum_probs=189.6
Q ss_pred hhHHHHHHHHHHHhC------------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 210 PTTVVVEEKMSALEG------------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 210 p~~~~Le~~LA~l~g------------~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
....+++++||++++ . ++++++++|++|+.+++.+++++||+|+++.++|++.... +...|+
T Consensus 75 ~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~----~~~~g~ 150 (416)
T 1bw0_A 75 VGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETV----CKAYGI 150 (416)
T ss_dssp TCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHH----HHHTTC
T ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHH----HHHcCc
Confidence 356789999999887 2 4677777778999999999999999999999999986543 344577
Q ss_pred EEEEeCC-------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc-c---
Q 009167 276 TATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-Q--- 341 (541)
Q Consensus 276 ~v~~vd~-------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~-~--- 341 (541)
++..++. .|+++|++++++ ++++|++++|+||||.++| +++|+++|+++|++||+|++|..... .
T Consensus 151 ~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 229 (416)
T 1bw0_A 151 GMHFYNCRPENDWEADLDEIRRLKDD-KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDP 229 (416)
T ss_dssp EEEEEEEEGGGTTEECHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCT
T ss_pred EEEEeecCcccCCCCCHHHHHHHhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 7766642 379999999987 4899999999999999999 88999999999999999999876321 1
Q ss_pred -----cccc---cCCcEEEECCccccCCCCCceEEEEEeCh--HHHHHHH----HHhhhcCCCchHHHHHHHHHhHH---
Q 009167 342 -----KALS---LGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIR----NLHHVLGGALNPNAAYLIIRGMK--- 404 (541)
Q Consensus 342 -----~~~~---~gaDivv~S~sK~lgg~gd~~gG~lv~~~--~li~~l~----~~~~~~G~~~s~~~a~l~l~~l~--- 404 (541)
.... .+.++++.|+||.++.+| ...|++++++ ++++.+. .... .....++..++.+...++
T Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-lr~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~ 307 (416)
T 1bw0_A 230 NATFTSVADFETTVPRVILGGTAKNLVVPG-WRLGWLLYVDPHGNGPSFLEGLKRVGM-LVCGPCTVVQAALGEALLNTP 307 (416)
T ss_dssp TCCCCCTTSSCCSCCEEEEEESTTTTSCGG-GCCEEEEEECTTCSCHHHHHHHHHHHH-HHTCSCHHHHHHHHHHHHSSC
T ss_pred CCCccCHHHccCCCcEEEEecchhhCCCCC-ceEEEEEeeCchhhHHHHHHHHHHHhc-cccCCCcHHHHHHHHHHhccc
Confidence 1111 123588899999987665 3468887754 2444333 2211 112334444444444443
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC----HHHHHHHHHHc-c
Q 009167 405 --TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL-K 477 (541)
Q Consensus 405 --tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~----~~~~~~~l~~L-~ 477 (541)
.+....++..++++.+.+.|+++|.+. +..|. .|.++++.++.. ......+.+.| +
T Consensus 308 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (416)
T 1bw0_A 308 QEHLDQIVAKIEESAMYLYNHIGECIGLA-PTMPR----------------GAMYLMSRIDLEKYRDIKTDVEFFEKLLE 370 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTEE-ECCCC----------------BTTEEEEEECGGGBSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCC----------------eeEEEEEeCCHHHcCCCCCHHHHHHHHHH
Confidence 344455666677888888888776654 22221 366788888521 01234555555 3
Q ss_pred CcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009167 478 IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 478 ~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~ 539 (541)
..++.+..|..+. .++.+|||++.. +.++.++.|.++++
T Consensus 371 ~~gi~v~~g~~f~-----------------------~~~~iRis~~~~~e~l~~~l~~l~~~l~ 411 (416)
T 1bw0_A 371 EENVQVLPGTIFH-----------------------APGFTRLTTTRPVEVYREAVERIKAFCQ 411 (416)
T ss_dssp HHCEECEEGGGGT-----------------------CTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred HCCEEEecccccC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 5577776664321 146899999852 22333444444443
No 112
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.92 E-value=1.7e-24 Score=222.51 Aligned_cols=286 Identities=15% Similarity=0.124 Sum_probs=195.0
Q ss_pred hhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhccCCCEEEEcC-CCCcchHHHHHhhcccCCeEEEEeCC--
Q 009167 210 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTT-DCYRKTRIFIETVLPKMGITATVIDP-- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e----~~i~~sSGs~Ai~~al~all~pGd~Vlv~~-~~y~~~~~~~~~~l~~~Gi~v~~vd~-- 282 (541)
+..++++++||+++|.. .++++++|++|+.+++.+++++||+|++.. +.|+..+ ...+...|+++..++.
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~---~~~~~~~g~~~~~v~~~~ 113 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARM---VEMAGLMGIAHHAYDCGE 113 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHH---HHHHHHHTCCEEEEECCT
T ss_pred HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHH---HHHHHHhCCceEEEeCCC
Confidence 67889999999999952 477888889999999999999999988776 4454432 2233445777776653
Q ss_pred ---CCHHHHHHhccCC-CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcEEEECCcc
Q 009167 283 ---ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (541)
Q Consensus 283 ---~d~e~Le~al~~~-~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDivv~S~sK 357 (541)
.|+++|+++++++ ++++|++++|+||||.+.|+++|.++|++||+++|+|++++.+.. ......++|+++.|+||
T Consensus 114 ~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K 193 (366)
T 1m32_A 114 VARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANK 193 (366)
T ss_dssp TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSS
T ss_pred CCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcc
Confidence 4899999998753 488999999999999999999999999999999999999875432 22233578999999999
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHHh---------------hh---cCCCchHHHHHHHHHhHHH------HHHHHHHH
Q 009167 358 FIGGHNDVLAGSISGSGKLVTQIRNLH---------------HV---LGGALNPNAAYLIIRGMKT------LHLRVQQQ 413 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~~~li~~l~~~~---------------~~---~G~~~s~~~a~l~l~~l~t------l~~r~~~~ 413 (541)
+++++.+ .|++++++++++.++... .. ...+.++...+.+...++. +....++.
T Consensus 194 ~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 271 (366)
T 1m32_A 194 CIQGVPG--FAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRY 271 (366)
T ss_dssp TTCCCSS--EEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccCCCc--eEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHH
Confidence 8754432 499999888776553210 00 0123444443333334433 23445566
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC--CHHHHHHHHHHccCcCeecccCCcccc
Q 009167 414 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DLTATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 414 ~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~--~~~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
.++++.+.+.|++. .+. +..|. . ...|.+++|.++. + ....++.+.|...++.+..|..+
T Consensus 272 ~~~~~~l~~~L~~~-~~~-~~~~~-----~--------~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~~-- 333 (366)
T 1m32_A 272 QQNQRSLVAGMRAL-GFN-TLLDD-----E--------LHSPIITAFYSPEDPQ-YRFSEFYRRLKEQGFVIYPGKVS-- 333 (366)
T ss_dssp HHHHHHHHHHHHHT-TCC-BSSCG-----G--------GBCSSEEEEECCCCTT-CCHHHHHHHHHHTTEECEECCCS--
T ss_pred HHHHHHHHHHHHHC-CCe-eccCc-----h--------hcCceEEEEEcCccCC-CCHHHHHHHHHHCCEEEECCcCC--
Confidence 67788888888875 331 11110 0 0135589999873 2 23455666666557776655321
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.++.|||+++..++++.++.+.++|++
T Consensus 334 ----------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~ 360 (366)
T 1m32_A 334 ----------------------QSDCFRIGNIGEVYAADITALLTAIRT 360 (366)
T ss_dssp ----------------------SSCEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred ----------------------CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 246899999987666666666666543
No 113
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.92 E-value=6.2e-24 Score=221.77 Aligned_cols=294 Identities=15% Similarity=0.125 Sum_probs=196.4
Q ss_pred cCCCCchhHHHHHHHHHHHhCCC-c--EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 204 YGRYGNPTTVVVEEKMSALEGAE-S--TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~e-~--~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
|+.+..+..++++++||+++|.+ + ++++++|++|+.+++.+++++||+|+++.++|++.. +...++..|+++..+
T Consensus 45 ~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v 122 (396)
T 2ch1_A 45 FHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAER--AVEMSERYGADVRTI 122 (396)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEE
T ss_pred CChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHH--HHHHHHHcCCceEEe
Confidence 44444456889999999999984 3 456667789999999999999999999999998853 113445668888877
Q ss_pred CC-----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcEEEEC
Q 009167 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (541)
Q Consensus 281 d~-----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDivv~S 354 (541)
+. .|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|++||+|++|+.+.. .....+++|+++.|
T Consensus 123 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s 202 (396)
T 2ch1_A 123 EGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTG 202 (396)
T ss_dssp ECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECC
T ss_pred cCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEc
Confidence 63 4899999999752389999999999999999999999999999999999999874321 22234578999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHh-----------------------hhcCCCchHHHHHHHHHhHHH-----H
Q 009167 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----------------------HVLGGALNPNAAYLIIRGMKT-----L 406 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-----------------------~~~G~~~s~~~a~l~l~~l~t-----l 406 (541)
++|+++++.+ .|+++.++++++.++... ....++.+......+...++. +
T Consensus 203 ~~K~~~~~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 280 (396)
T 2ch1_A 203 AQKVLGAPPG--ITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGL 280 (396)
T ss_dssp CC-CCCCCSS--CEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCH
T ss_pred CCccccCCCC--eEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhH
Confidence 9998776543 388888988887764310 001122333333332333332 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccC-cCeeccc
Q 009167 407 HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSF 485 (541)
Q Consensus 407 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~-~~iavS~ 485 (541)
....++..++++.+.+.|+++ ++. +..|. .++ ..+++++|.++.+ ....++.+.|.. .++.+..
T Consensus 281 ~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----~~~--------~~~~~~~~~~~~~-~~~~~~~~~L~~~~gi~v~~ 345 (396)
T 2ch1_A 281 ENQIKRRIECAQILYEGLGKM-GLD-IFVKD----PRH--------RLPTVTGIMIPKG-VDWWKVSQYAMNNFSLEVQG 345 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TCC-BSSCS----GGG--------BCTTEEEEECCTT-CCHHHHHHHHHHHHCBCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCe-eccCC----ccc--------cCCceEEEEcCCC-CCHHHHHHHHHHhCCEEEec
Confidence 344556667788888888775 331 11111 000 1356889988632 124455665543 3666655
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe-cC----CCHHHHHHHHHHHHh
Q 009167 486 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GV----EDFEDLKADVLQALH 539 (541)
Q Consensus 486 G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv-G~----e~~edli~dL~~AL~ 539 (541)
|..+ ..++.|||++ +. ++.+.+++.|.++++
T Consensus 346 g~~~-----------------------~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~ 381 (396)
T 2ch1_A 346 GLGP-----------------------TFGKAWRVGIMGECSTVQKIQFYLYGFKESLK 381 (396)
T ss_dssp CCGG-----------------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred Cccc-----------------------cCCCEEEEECCCCcCCHHHHHHHHHHHHHHHH
Confidence 4310 1257899999 63 234555666666554
No 114
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.92 E-value=2.2e-23 Score=219.66 Aligned_cols=254 Identities=14% Similarity=0.135 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 212 TVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 212 ~~~Le~~LA~l~----g~----e-~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
..+|++++|+++ |. + +++++++|++|+.+++.+++++||+|+++.++|++.... +...|.++..++.
T Consensus 64 ~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~----~~~~g~~~~~v~~ 139 (411)
T 2o0r_A 64 SAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPV----VAMAGAHRVTVPL 139 (411)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH----HHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHH----HHHcCCEEEEeec
Confidence 567888888875 53 3 567777778999999999999999999999999996543 3445777766653
Q ss_pred --------CCHHHHHHhccCCCceEEEEeCCCCCCCccccH---HHHHHHHHhCCCEEEEeCCCCCCCc-----ccc--c
Q 009167 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLN-----QKA--L 344 (541)
Q Consensus 283 --------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl---~~Ia~la~~~gi~lIvDea~a~~~~-----~~~--~ 344 (541)
.|+++|++++++ ++++|++++|+||||.++|. ++|+++|+++|++||+|++|+.+.. ... +
T Consensus 140 ~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 218 (411)
T 2o0r_A 140 VPDGRGFALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGF 218 (411)
T ss_dssp EEETTEEECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred cccccCCCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhc
Confidence 489999999987 59999999999999999874 7999999999999999999875421 111 1
Q ss_pred --ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHHHHH
Q 009167 345 --SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTAL 418 (541)
Q Consensus 345 --~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~~a~ 418 (541)
..+.|+++.|+||.++.+| ..+|++++++++++.+.......+...++.....+...++ .+....++..++++
T Consensus 219 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 297 (411)
T 2o0r_A 219 DGMAERTITISSAAKMFNCTG-WKIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRD 297 (411)
T ss_dssp TTTGGGEEEEEEHHHHTTCTT-TCEEEEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeechhhcCCcc-ceEEEEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 1467999999999998665 4579999999998888765543332223322222233333 23334455556777
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHHHHcc-CcCeecccCCcc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALK-IPYIAPSFGGCE 489 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~-~~~iavS~G~~~ 489 (541)
.+.+.|+++ ++. +..|. .|.++++.++.. ......+.+.|. ..++.+..|..+
T Consensus 298 ~l~~~L~~~-g~~-~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f 352 (411)
T 2o0r_A 298 RLAAGLTEI-GFA-VHDSY----------------GTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAF 352 (411)
T ss_dssp HHHHHHHHH-TCE-ECCCC----------------BSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGG
T ss_pred HHHHHHHHc-CCE-ecCCC----------------eeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhh
Confidence 778888765 332 22121 355889998631 012345555543 457777776543
No 115
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=4.4e-24 Score=227.13 Aligned_cols=297 Identities=13% Similarity=0.065 Sum_probs=194.2
Q ss_pred hhHHHHHHHHHHHh------C--CCcEEEeCCHHHHHHHHHHHhccCCC--------------EEEEc-CCCCcchHHHH
Q 009167 210 PTTVVVEEKMSALE------G--AESTVIMASGMSASTVMLLALVPAGG--------------HIVTT-TDCYRKTRIFI 266 (541)
Q Consensus 210 p~~~~Le~~LA~l~------g--~e~~i~~sSGs~Ai~~al~all~pGd--------------~Vlv~-~~~y~~~~~~~ 266 (541)
....+||++||+++ + .++++++++|++|+.+++.+++++|| +|+++ .|+|.+.....
T Consensus 83 ~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~ 162 (444)
T 3if2_A 83 QGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVH 162 (444)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCC
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcc
Confidence 34678999999887 2 25788888888999999999999998 78876 88998754211
Q ss_pred H--hhcccCCeEEEEeC----------CCCHHHHHHh---ccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCE
Q 009167 267 E--TVLPKMGITATVID----------PADMEGLEAA---LNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAI 328 (541)
Q Consensus 267 ~--~~l~~~Gi~v~~vd----------~~d~e~Le~a---l~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~ 328 (541)
. ..+...|..+..++ ..|+++|+++ +++ ++++|++++|+||||.++| +++|+++|++||++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~ 241 (444)
T 3if2_A 163 VEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIP 241 (444)
T ss_dssp SSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCC
T ss_pred cccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCE
Confidence 0 02445566666554 2489999988 565 5999999999999999999 78899999999999
Q ss_pred EEEeCCCCCCCcc------cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHh
Q 009167 329 VCIDGTFATPLNQ------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (541)
Q Consensus 329 lIvDea~a~~~~~------~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~ 402 (541)
||+|++|+.++.. .+...+.++++.|+||+ +++| ..+|++++++++++.++......+...++..+.++...
T Consensus 242 li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G-~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~ 319 (444)
T 3if2_A 242 LIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-GLPG-MRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPL 319 (444)
T ss_dssp EEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-TCGG-GCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHH
T ss_pred EEEECCCCCcccccccccccccCCCCEEEEechhhc-cCCC-CceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHH
Confidence 9999998753221 11224678999999997 4443 45789999999998888765544433333333333333
Q ss_pred HHH------HHH-HHHHHHHHHHHHHHHHHh-CCCce-EEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHH
Q 009167 403 MKT------LHL-RVQQQNSTALRMAKILEA-HPKVK-RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFI 473 (541)
Q Consensus 403 l~t------l~~-r~~~~~~~a~~la~~L~~-~p~v~-~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l 473 (541)
++. +.. ..+...++.+.+.+.|.+ .+.+. .+..|. .|.++++.++........+.
T Consensus 320 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~l~ 383 (444)
T 3if2_A 320 VANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPE----------------GAIFLWLWFKDLPISTLDLY 383 (444)
T ss_dssp HHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCC----------------BSSEEEEEETTCSSCHHHHH
T ss_pred HHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCC----------------ccEEEEEEcCCCCCCHHHHH
Confidence 322 111 122334555666677765 34432 232232 46788999974112345666
Q ss_pred HHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHH---HHHHHHHHHHh
Q 009167 474 DALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFE---DLKADVLQALH 539 (541)
Q Consensus 474 ~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~e---dli~dL~~AL~ 539 (541)
+.|...++.++.|..+..-..... .....+.||||++. +.+ ..++.|.++++
T Consensus 384 ~~l~~~gi~v~~g~~~~~~~~~~~-------------~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~ 438 (444)
T 3if2_A 384 ERLKAKGTLIVPSEYFFPGVDVSD-------------YQHAHECIRMSIAA-DEQTLIDGIKVIGEVVR 438 (444)
T ss_dssp HHHHHTTEECEEGGGSCTTCCCTT-------------CSGGGSEEEEESSS-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCeEEecchhhcCCCCCcc-------------cccCCCeEEEEEeC-CHHHHHHHHHHHHHHHH
Confidence 677667888888866432100000 00124789999998 443 33444445443
No 116
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.7e-23 Score=223.77 Aligned_cols=286 Identities=14% Similarity=0.108 Sum_probs=193.3
Q ss_pred hHHHHHHHHHHHh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC-
Q 009167 211 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID- 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd- 281 (541)
...+|+++||+++ |. ++++++++|++|+.+++.+++++||+|+++.|.|++....+ ...|.++..++
T Consensus 96 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~ 171 (447)
T 3b46_A 96 GRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNI----ELCGGKVVYVPI 171 (447)
T ss_dssp CCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHH----HHTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHH----HHcCCEEEEEeC
Confidence 3567888888876 32 35666666679999999999999999999999999866443 34466655553
Q ss_pred ----------------CCCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc--
Q 009167 282 ----------------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-- 340 (541)
Q Consensus 282 ----------------~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~-- 340 (541)
..|+++|++++++ ++++|++++|+||||.+++ +++|+++|++||++||+||+|.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g 250 (447)
T 3b46_A 172 NPPKELDQRNTRGEEWTIDFEQFEKAITS-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD 250 (447)
T ss_dssp ECCGGGGTSCBCSTTSEECHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS
T ss_pred CCccccccccccccCcccCHHHHHHhhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC
Confidence 1378999999986 5999999999999999975 88999999999999999999875321
Q ss_pred ----cccc---ccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH------H
Q 009167 341 ----QKAL---SLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------L 406 (541)
Q Consensus 341 ----~~~~---~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t------l 406 (541)
...+ ..+.|+++.|+||+++.+| ...|++++ ++++++.+.........+.++...+.+...++. +
T Consensus 251 ~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G-~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~ 329 (447)
T 3b46_A 251 SFTRIATLSPEIGQLTLTVGSAGKSFAATG-WRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYF 329 (447)
T ss_dssp CCCCGGGSCHHHHTTEEEEEEHHHHTTCTT-SCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCcCHHHcCCCCCCcEEEEecCchhcCCcc-hhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHH
Confidence 1111 2478999999999998555 34799999 999998887654433333444444444444443 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC--------------HHHHHHH
Q 009167 407 HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD--------------LTATIKF 472 (541)
Q Consensus 407 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~--------------~~~~~~~ 472 (541)
....++..++++.+.+.|+++ ++. +..|. .|.+++++++.. .....+|
T Consensus 330 ~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 391 (447)
T 3b46_A 330 EKMRQEYINKFKIFTSIFDEL-GLP-YTAPE----------------GTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRI 391 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TCC-EECCS----------------BSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCe-ecCCC----------------eeEEEEEecccccCccccccccccccCCCHHHH
Confidence 233445556777777888765 332 22221 466888888631 1234566
Q ss_pred HHHcc-CcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 473 IDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 473 l~~L~-~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
.+.|. ..++.+..|+.+..- + + .+..++.||||++. +. +.++...+.|
T Consensus 392 ~~~l~~~~gV~v~pg~~f~~~--~----~----------~~~~~~~iRls~~~-~~-e~l~~~~~~l 440 (447)
T 3b46_A 392 SHWLINELGVVAIPPTEFYIK--E----H----------EKAAENLLRFAVCK-DD-AYLENAVERL 440 (447)
T ss_dssp HHHHHHHTCEECBCGGGGSCG--G----G----------GGGGTTEEEEECCS-CH-HHHHHHHHHG
T ss_pred HHHHHHhCCEEEECchHhCCC--C----c----------cCCCCCEEEEEEeC-CH-HHHHHHHHHH
Confidence 66653 467887777554210 0 0 00125789999996 33 3344444444
No 117
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.92 E-value=1.2e-23 Score=221.47 Aligned_cols=284 Identities=13% Similarity=0.082 Sum_probs=192.9
Q ss_pred hHHHHHHHHHHHhC------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 211 TTVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~g------~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...++++++|++++ . +.++++++|++|+.+++.+++++||+|+++.++|++....+ ...|.++..++.
T Consensus 79 g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~ 154 (406)
T 1xi9_A 79 GLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLV----KFYGGKPVEYRT 154 (406)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH----HHTTCEEEEEEE
T ss_pred CcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHH----HHcCCEEEEeec
Confidence 35678888888762 2 46777777789999999999999999999999998865433 345777766653
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc----ccccc--c
Q 009167 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN----QKALS--L 346 (541)
Q Consensus 283 -------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~----~~~~~--~ 346 (541)
.|+++|++++++ ++++|++++|+||||.+++ +++|.++|+++|++||+|++|+.+.. ..... .
T Consensus 155 ~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 233 (406)
T 1xi9_A 155 IEEEDWQPDIDDIRKKITD-RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTK 233 (406)
T ss_dssp EGGGTSEECHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCS
T ss_pred CCCcCCcCCHHHHHHhhCc-CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCC
Confidence 279999999987 4999999999999999987 88999999999999999999876432 11112 3
Q ss_pred CC-cEEEECCccccCCCCCceEEEEE--eCh----HHHHHHHHHhhhcCCCchHHHHHHHHHhHH----HHHHHHHHHHH
Q 009167 347 GA-DLVLHSATKFIGGHNDVLAGSIS--GSG----KLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNS 415 (541)
Q Consensus 347 ga-Divv~S~sK~lgg~gd~~gG~lv--~~~----~li~~l~~~~~~~G~~~s~~~a~l~l~~l~----tl~~r~~~~~~ 415 (541)
+. |+++.|+||+++.+| ...|+++ +++ ++++.++...... ...++..++.+...++ .+....++..+
T Consensus 234 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 311 (406)
T 1xi9_A 234 DVPVIVMNGLSKVYFATG-WRLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKE 311 (406)
T ss_dssp SSCEEEEEESTTTTCCGG-GCCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred CceEEEEeccccccCCCc-cEEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 56 899999999998555 3458887 888 8988887655433 3344444444444442 23444455567
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC--CHHHHHHHHHHcc-CcCeecccCCccccc
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DLTATIKFIDALK-IPYIAPSFGGCESIV 492 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~--~~~~~~~~l~~L~-~~~iavS~G~~~sl~ 492 (541)
+++.+.+.|++.|.+. +..|. .|.++++.++. + ....++.+.|. ..++.+..|..+..
T Consensus 312 ~~~~l~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~f~~- 372 (406)
T 1xi9_A 312 RRDYIYKRLNEIPGIS-TTKPQ----------------GAFYIFPKIEVGPW-KNDKEFVLDVLHNAHVLFVHGSGFGE- 372 (406)
T ss_dssp HHHHHHHHHHTSTTEE-CCCCC----------------BSSEECCEECSCSC-SSHHHHHHHHHHHHCEECEEGGGGCG-
T ss_pred HHHHHHHHHHhCCCCe-eecCC----------------eeEEEEEecCccCC-CCHHHHHHHHHHhCCEEEeCchhcCC-
Confidence 7778888888776543 21111 24456667763 1 12345666553 55777766644311
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009167 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 540 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL~~ 540 (541)
..++.||||++.. +.++.++.|.+++++
T Consensus 373 --------------------~~~~~lRis~~~~~~~i~~~~~~l~~~l~~ 402 (406)
T 1xi9_A 373 --------------------YGAGHFRAVFLPPIEILEEAMDRFEKFMKE 402 (406)
T ss_dssp --------------------GGTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred --------------------CCCCEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 0256899999931 223344555555543
No 118
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.92 E-value=1.9e-23 Score=216.74 Aligned_cols=286 Identities=14% Similarity=0.148 Sum_probs=192.8
Q ss_pred hHHHHHHHHHHHhCC------CcEEEeCCHHHHHHHHHHHhc---cCCCEEEEcCC-CCcchHHHHHhhcccCCeEEEEe
Q 009167 211 TTVVVEEKMSALEGA------ESTVIMASGMSASTVMLLALV---PAGGHIVTTTD-CYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~------e~~i~~sSGs~Ai~~al~all---~pGd~Vlv~~~-~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
...+++++++++++. ++++++++|++|+.+++.++. ++||+|++..+ .|+... ...+...|.++..+
T Consensus 39 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~---~~~~~~~g~~~~~v 115 (385)
T 2bkw_A 39 IFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRF---ADCLRSYGAQVDVV 115 (385)
T ss_dssp HHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHH---HHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHH---HHHHHHcCCceEEE
Confidence 456788999998876 346667778899999999997 89999988744 454432 13345568888888
Q ss_pred CC------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC--CCEEEEeCCCCCCCc-ccccccCCcEE
Q 009167 281 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN-QKALSLGADLV 351 (541)
Q Consensus 281 d~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~--gi~lIvDea~a~~~~-~~~~~~gaDiv 351 (541)
+. .|+++|++++++.++++|++++|+||||.+.|+++|.++|+++ |++||+|++++.+.. .+....++|++
T Consensus 116 ~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~ 195 (385)
T 2bkw_A 116 RPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFA 195 (385)
T ss_dssp CCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEE
T ss_pred ecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEE
Confidence 76 3899999999753489999999999999999999999999999 999999999875432 23334578999
Q ss_pred EECCccccCCCCCceEEEEEeChHHHH-HHH------------------HHh-h-hcC-----CCchHHHHHHHHHhHHH
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGKLVT-QIR------------------NLH-H-VLG-----GALNPNAAYLIIRGMKT 405 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~li~-~l~------------------~~~-~-~~G-----~~~s~~~a~l~l~~l~t 405 (541)
+.|+||+++++.+ .|++++++++++ +++ ... . ..+ ++.+......+...++.
T Consensus 196 ~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 273 (385)
T 2bkw_A 196 LTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKE 273 (385)
T ss_dssp EEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHH
T ss_pred EecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999997765432 388888888776 431 110 1 111 23444433333333333
Q ss_pred -----HHHHHHHHHHHHHHHHHHH-HhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCc
Q 009167 406 -----LHLRVQQQNSTALRMAKIL-EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP 479 (541)
Q Consensus 406 -----l~~r~~~~~~~a~~la~~L-~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~ 479 (541)
+....++..++++++.+.| ++. .+. +..|. +.. ...+++++|.+++ ..++.+.|...
T Consensus 274 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~-~~~~~----~~~-------~~~~~~~~~~~~~----~~~~~~~l~~~ 336 (385)
T 2bkw_A 274 ILEEGLHKRWDLHREMSDWFKDSLVNGL-QLT-SVSRY----PSN-------MSAHGLTAVYVAD----PPDVIAFLKSH 336 (385)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHTTT-CCE-ESSCS----SST-------TBCSSCEEEECSC----HHHHHHHHHHT
T ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHhc-Cce-ecccC----ccc-------ccCCceEEEecCC----HHHHHHHHHHC
Confidence 3344556667788888888 765 432 22111 000 0146789999864 45566666666
Q ss_pred CeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE-ec-------CCCHHHHHHHHHHHHhh
Q 009167 480 YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS-FG-------VEDFEDLKADVLQALHA 540 (541)
Q Consensus 480 ~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlS-vG-------~e~~edli~dL~~AL~~ 540 (541)
++.++.|..+ ...++.+||| ++ .++.+.+++.|.+++++
T Consensus 337 gi~v~~g~~~----------------------~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 337 GVVIAGGIHK----------------------DIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp TEECBCCCCT----------------------TTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred CeEEeCCCCc----------------------ccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 7777765321 0124689999 76 24566667777766654
No 119
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.92 E-value=6.3e-24 Score=220.33 Aligned_cols=281 Identities=12% Similarity=0.084 Sum_probs=194.2
Q ss_pred CCCchhHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHH---hc---cCC-CEEEEcCCCCcchHHHHHhhccc----C
Q 009167 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLA---LV---PAG-GHIVTTTDCYRKTRIFIETVLPK----M 273 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~-e~~i~~sSGs~Ai~~al~a---ll---~pG-d~Vlv~~~~y~~~~~~~~~~l~~----~ 273 (541)
+|+++...+++++|++++|. ++++++++|++|+.+++.. +. ++| |+|++++++|++........... .
T Consensus 66 ~y~~~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~ 145 (375)
T 2eh6_A 66 LYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHK 145 (375)
T ss_dssp TBCCHHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTT
T ss_pred ccCCHHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccC
Confidence 46677889999999999998 7788888899999999865 35 788 99999999998854333222111 1
Q ss_pred Ce-----EEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCC-c---
Q 009167 274 GI-----TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL-N--- 340 (541)
Q Consensus 274 Gi-----~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~-~--- 340 (541)
+. .+..++..|+++|++++++ ++++|++++|+||||.+.| +++|.++|+++|+++|+|++|+... .
T Consensus 146 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 224 (375)
T 2eh6_A 146 GFEPLVPGFSYAKLNDIDSVYKLLDE-ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF 224 (375)
T ss_dssp TTCSCCSSEEEECTTCHHHHHTTCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred CCCCCCCCceeCCCchHHHHHHHhcC-CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc
Confidence 22 2566677799999999987 5999999999999999988 9999999999999999999988421 1
Q ss_pred ccccccC--CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 009167 341 QKALSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTAL 418 (541)
Q Consensus 341 ~~~~~~g--aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~ 418 (541)
......+ .|++ |+||++++ | ...|++++++++++.++..........++..+..+...++.+....++..++++
T Consensus 225 ~~~~~~~~~~d~~--s~SK~~~~-g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 300 (375)
T 2eh6_A 225 YAYQHFNLKPDVI--ALAKGLGG-G-VPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGN 300 (375)
T ss_dssp SGGGGGTCCCSEE--EECGGGGT-T-SCCEEEEEEHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCCEE--EEcccccC-C-CCeEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112334 7877 56699985 3 346888888887776654211112233566666556666665545556667778
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
.+.+.|++.+.. . ..+.|++++++++.+ ..++.+.|...++.+..+
T Consensus 301 ~l~~~L~~~~~~-~------------------~~~~g~~~~~~~~~~---~~~~~~~l~~~gi~~~~~------------ 346 (375)
T 2eh6_A 301 YFKEKLKELGKG-K------------------VKGRGLMLGLELERE---CKDYVLKALEKGLLINCT------------ 346 (375)
T ss_dssp HHHHHHHHTTSS-E------------------EEEETTEEEEECSSC---CHHHHHHHHHTTEECEEE------------
T ss_pred HHHHHHHHHhcC-C------------------ceEEEEEEEEEEcCc---HHHHHHHHHHCCCEEecC------------
Confidence 888888775431 0 112577899998743 234455554445544321
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.++.+||+++....++.++.+.++|++
T Consensus 347 ---------------~~~~iRi~~~~~~~~~~i~~~~~~l~~ 373 (375)
T 2eh6_A 347 ---------------AGKVLRFLPPLIIQKEHIDRAISVLRE 373 (375)
T ss_dssp ---------------TTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ---------------CCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 146899999866656666666666653
No 120
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.92 E-value=1.1e-23 Score=220.79 Aligned_cols=291 Identities=14% Similarity=0.150 Sum_probs=200.8
Q ss_pred CccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHhhc---
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVL--- 270 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~-------pG-d~Vlv~~~~y~~~~~~~~~~l--- 270 (541)
+.+.++.++...+++++|++++|.++++++++|++|+.+++..+.. +| |+|++.++.|++.........
T Consensus 73 ~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~ 152 (406)
T 4adb_A 73 HTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQP 152 (406)
T ss_dssp CCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCG
T ss_pred cccCCcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCc
Confidence 4446678899999999999999999899999999999999998765 66 999999999988643322211
Q ss_pred ------ccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccc-----cHHHHHHHHHhCCCEEEEeCCCCCCC
Q 009167 271 ------PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 271 ------~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~-----dl~~Ia~la~~~gi~lIvDea~a~~~ 339 (541)
...+..+..++..|+++|++++++ ++++|+++ |+||+|.++ ++++|.++|++||++||+||+|....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~ 230 (406)
T 4adb_A 153 AYSQDFAPLPADIRHAAYNDINSASALIDD-STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVG 230 (406)
T ss_dssp GGTGGGCSCCSSEEEECTTCHHHHHTTCST-TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred cccccCCCCCCCceEeCCCcHHHHHHHhcC-CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 122345667777899999999986 59999998 999999776 58899999999999999999986321
Q ss_pred ------cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHH--HHHHH
Q 009167 340 ------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL--HLRVQ 411 (541)
Q Consensus 340 ------~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl--~~r~~ 411 (541)
.........|++ |+||.+++ | ..+|++++++++++.+...........++..+..+...++.+ ....+
T Consensus 231 ~~g~~~~~~~~~~~~d~~--t~sK~~~~-G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 306 (406)
T 4adb_A 231 RTGELYAYMHYGVTPDLL--TTAKALGG-G-FPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLN 306 (406)
T ss_dssp TTSSSSHHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHH
T ss_pred ccchhHHHHhcCCCCCEE--EechhhcC-C-CCeEEEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 112234456777 57999984 3 467899999998887765443334445666666666666654 34445
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-HHHHHHHHHccCcCeecccCCccc
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCES 490 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-~~~~~~l~~L~~~~iavS~G~~~s 490 (541)
+..++++.+.+.|++... .++.. ...++.|.+++|+++... ....++.+.|...++.+..++
T Consensus 307 ~~~~~~~~l~~~l~~~~~----~~~~~----------~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~--- 369 (406)
T 4adb_A 307 GVKQRHDWFVERLNTINH----RYGLF----------SEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAG--- 369 (406)
T ss_dssp HHHHHHHHHHHHHHHHHH----HHCCE----------EEEEEETTEEEEEECTTTTTCHHHHHHHHHHTTEECEESS---
T ss_pred HHHHHHHHHHHHHHHHHH----hCCCc----------eEEEEEEEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeecC---
Confidence 555667777777765311 00100 011335789999997521 134566777665576555431
Q ss_pred ccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH----HHHHHHHHHHHh
Q 009167 491 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF----EDLKADVLQALH 539 (541)
Q Consensus 491 l~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~----edli~dL~~AL~ 539 (541)
++.|||+++...+ +.+++.|.++++
T Consensus 370 ------------------------~~~iRi~~~~~~~~e~i~~~~~~l~~~l~ 398 (406)
T 4adb_A 370 ------------------------GNVVRFAPALNVSEEEVTTGLDRFAAACE 398 (406)
T ss_dssp ------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ------------------------CCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 4689997765444 444555555544
No 121
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.92 E-value=1.5e-23 Score=216.98 Aligned_cols=305 Identities=16% Similarity=0.155 Sum_probs=206.0
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al---l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~- 283 (541)
+.+...+++++||+++|.+++++++||++|+.+++.++ +++||+|+++.++|+++...+ ...|+++.+++.+
T Consensus 30 ~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~ 105 (375)
T 2fnu_A 30 QGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANML----LESGYTPVFAGIKN 105 (375)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHH----HHTTCEEEECCBCT
T ss_pred CChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHH----HHCCCEEEEeccCC
Confidence 36788999999999999988899999999999999999 899999999999999876544 3368888888753
Q ss_pred ----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccc--cccCCcEEEECCc-
Q 009167 284 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA--LSLGADLVLHSAT- 356 (541)
Q Consensus 284 ----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~--~~~gaDivv~S~s- 356 (541)
|+++|++++++ ++++|++++| ||.+.|+++|.++|+++|++||+|++++.+..... ...-.|+++.|++
T Consensus 106 ~~~~d~~~l~~~i~~-~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~ 181 (375)
T 2fnu_A 106 DGNIDELALEKLINE-RTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHA 181 (375)
T ss_dssp TSSBCGGGSGGGCCT-TEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCT
T ss_pred CCCCCHHHHHhhcCc-CceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCC
Confidence 78999999987 4999888666 99999999999999999999999999876543221 2111378888887
Q ss_pred -cccCCCCCceEEEEEeC-hHHHHHHHHHhhh--------------cC--CCchHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 009167 357 -KFIGGHNDVLAGSISGS-GKLVTQIRNLHHV--------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNSTAL 418 (541)
Q Consensus 357 -K~lgg~gd~~gG~lv~~-~~li~~l~~~~~~--------------~G--~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~ 418 (541)
|++++ | +||+++.+ ++++++++..... .+ ..+.+..+.+.+..++.+..+.++..++++
T Consensus 182 ~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 258 (375)
T 2fnu_A 182 IKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAAL 258 (375)
T ss_dssp TSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99976 5 46666644 6788877664321 11 134566565555556666777778888899
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHH-HHHHHHHHccCcCeecccCCcccccccCcc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT-ATIKFIDALKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~-~~~~~l~~L~~~~iavS~G~~~sl~~~pa~ 497 (541)
++.+.|++.|.+. +..|.-.. .+.+.++++.++.... ....+.+.|...++.++.+ +......+..
T Consensus 259 ~l~~~L~~~~~~~-~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~-~~p~~~~~~~ 325 (375)
T 2fnu_A 259 TYDRIFKDNPYFT-PLHPLLKD-----------KSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVH-YKPIYQYQLY 325 (375)
T ss_dssp HHHHHHTTCSSEE-ESGGGCSS-----------CCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCC-CCCGGGSHHH
T ss_pred HHHHHhhcCCCcc-ccCCCCCC-----------CcceEEEEEEeCccccchHHHHHHHHHHCCCCcccc-ccccccchhh
Confidence 9999998876653 22110000 1123456777753111 3566777776667777632 1111100000
Q ss_pred c-c--ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 498 M-S--YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 498 ~-~--~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
. . ...++... ...++.|||+++...+++.++.+.++|++
T Consensus 326 ~~~~~~~~~~~~~----~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 367 (375)
T 2fnu_A 326 QQLFNTAPLKSAE----DFYHAEISLPCHANLNLESVQNIAHSVLK 367 (375)
T ss_dssp HHHHCCCCCHHHH----HHHHHEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred hcCCCccCChHHH----HHHhCEEEecCCCCCCHHHHHHHHHHHHH
Confidence 0 0 00011000 01236899999987766666666666653
No 122
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.92 E-value=2.4e-23 Score=219.00 Aligned_cols=295 Identities=12% Similarity=0.077 Sum_probs=191.0
Q ss_pred chhHHHHHHHHHHHh------CC--CcEEEeCCHHHHHHHHHHHhccCCC-----EEEEc-CCCCcchHHHHHh--hccc
Q 009167 209 NPTTVVVEEKMSALE------GA--ESTVIMASGMSASTVMLLALVPAGG-----HIVTT-TDCYRKTRIFIET--VLPK 272 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~------g~--e~~i~~sSGs~Ai~~al~all~pGd-----~Vlv~-~~~y~~~~~~~~~--~l~~ 272 (541)
.....+||++||+++ +. ++++++++|++|+.+++.+++++|| +|+++ .|+|++....... .+..
T Consensus 74 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~ 153 (417)
T 3g7q_A 74 PQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVS 153 (417)
T ss_dssp TTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEE
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhcc
Confidence 345778999999986 33 5678888888999999999999988 99997 9999886533211 1233
Q ss_pred CCeEEEEeCC------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc---
Q 009167 273 MGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (541)
Q Consensus 273 ~Gi~v~~vd~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~--- 340 (541)
.+..+..++. .|+++|+ +++ ++++|++++|+||||.++| +++|+++|++||+++|+|++|+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~d~~~l~--~~~-~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~ 230 (417)
T 3g7q_A 154 ARPNIELLPEGQFKYHVDFEHLH--IGE-ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGII 230 (417)
T ss_dssp CCCEEEEEGGGEEEEECCGGGCC--CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCB
T ss_pred ccCcccccCCcccccccCHHHhc--ccc-CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccc
Confidence 4455555543 3778877 555 5999999999999999999 88999999999999999999875321
Q ss_pred ---ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH------HHH-HH
Q 009167 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHL-RV 410 (541)
Q Consensus 341 ---~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t------l~~-r~ 410 (541)
..+...+.++++.|+||+ +++| ...|++++++++++.++......+...++..+.++...++. +.. ..
T Consensus 231 ~~~~~~~~~~~~i~~~s~sK~-~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 308 (417)
T 3g7q_A 231 FSEARPLWNPNIILCMSLSKL-GLPG-SRCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIK 308 (417)
T ss_dssp CSCCCCCCCTTEEEEEESGGG-TCTT-SCCEEEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHH
T ss_pred ccccccCCCCCEEEEEechhc-cCCC-cceEEEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHH
Confidence 112234678999999995 5444 45789999999999988766655544444444433333322 111 22
Q ss_pred HHHHHHHHHHHHHHHh-CCCc-eEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCc
Q 009167 411 QQQNSTALRMAKILEA-HPKV-KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 411 ~~~~~~a~~la~~L~~-~p~v-~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
+...++.+.+.+.|++ .+.+ -.+..|. .|.++++.++........+.+.|...++.+..|..
T Consensus 309 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~ 372 (417)
T 3g7q_A 309 PFYYQRVQQTIAIIRRYLSEERCLIHKPE----------------GAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHY 372 (417)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTTCEEECCC----------------BSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGG
T ss_pred HHHHHHHHHHHHHHHHhcccCCceeeCCC----------------cceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchh
Confidence 2334556667777765 3432 1232232 46788999874112345666666667888888765
Q ss_pred ccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHHh
Q 009167 489 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQALH 539 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~---edli~dL~~AL~ 539 (541)
+....... .+..++.||||++. +. ++.++.|.++++
T Consensus 373 f~~~~~~~--------------~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~ 411 (417)
T 3g7q_A 373 FFPGLDKP--------------WPHTHQCMRMNYVP-EPDKIEAGVKILAEEIE 411 (417)
T ss_dssp GCTTBSSC--------------CGGGGGEEEEESCS-CHHHHHHHHHHHHHHHH
T ss_pred hCCCCccc--------------cccCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 43210000 00014689999997 43 334444555544
No 123
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.92 E-value=1.2e-22 Score=208.56 Aligned_cols=279 Identities=17% Similarity=0.151 Sum_probs=190.1
Q ss_pred CchhHHHHHHHHHHHhCCCc-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccC--CeEEEEeCCC-
Q 009167 208 GNPTTVVVEEKMSALEGAES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM--GITATVIDPA- 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~-~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~--Gi~v~~vd~~- 283 (541)
..+..+++++++++++|.+. .+++++|++|+.+++.+++++||+|+++.+.|.+++.. ..+... |.++..++.+
T Consensus 41 ~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 118 (356)
T 1v72_A 41 TDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDEC--GAPEFFSNGAKLMTVDGPA 118 (356)
T ss_dssp CSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSST--THHHHHTTSCEEEECCCGG
T ss_pred cchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhcCCCCEEEEcCccchhhhhc--hHHHHHhCCcEEEEecCCC
Confidence 46788999999999999655 57888999999999999999999999999998775432 002334 7788877754
Q ss_pred ---CHHHHHH-hccCC------CceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCC------Cccccc
Q 009167 284 ---DMEGLEA-ALNNN------NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP------LNQKAL 344 (541)
Q Consensus 284 ---d~e~Le~-al~~~------~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~------~~~~~~ 344 (541)
|+++|++ ++++. ++++|++++|+| ||.+++ +++|.++|++||++||+|++|..+ ......
T Consensus 119 ~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 197 (356)
T 1v72_A 119 AKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM 197 (356)
T ss_dssp GCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT
T ss_pred CeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh
Confidence 8999999 88751 489999999987 999554 789999999999999999997532 111111
Q ss_pred --ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc--hHHHHHHHHHhHHH--HHHHHHHHHHHHH
Q 009167 345 --SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKT--LHLRVQQQNSTAL 418 (541)
Q Consensus 345 --~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~--s~~~a~l~l~~l~t--l~~r~~~~~~~a~ 418 (541)
..+.|+++.|+||+ +++ ..+|+++++++++++++......|... ....+..+.+.++. .....++..++++
T Consensus 198 ~~~~~~d~~~~s~sK~-g~~--~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 274 (356)
T 1v72_A 198 TWKAGVDALSFGATKN-GVL--AAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQ 274 (356)
T ss_dssp TGGGTCCEEEECCGGG-TCS--SCEEEEESSGGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHH
T ss_pred hhhhcCCEEEEecccC-CCc--CccEEEEECHHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 23689999999999 432 113788889988888765543333221 12222212222221 2233455567778
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
++.+.|++.+++.. ..|. .++++++.++. .+.+.|...++.+..|..
T Consensus 275 ~l~~~L~~~~g~~~-~~~~----------------~~~~~~~~~~~------~~~~~l~~~gi~v~~g~~---------- 321 (356)
T 1v72_A 275 RLAQGLEGLGGVEV-LGGT----------------EANILFCRLDS------AMIDALLKAGFGFYHDRW---------- 321 (356)
T ss_dssp HHHHHHTTCTTEEE-ESCC----------------CSSEEEEEECH------HHHHHHHHTTCBCBCSSS----------
T ss_pred HHHHHHhhCCCcEE-ccCC----------------CccEEEEEcCH------HHHHHHHhcCeEEecccc----------
Confidence 88888887666543 2332 35688888851 455555445666654420
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+ ++.+||+++...+++.++.+.++|++
T Consensus 322 -------------~--~~~iRi~~~~~~~~~~i~~~~~~l~~ 348 (356)
T 1v72_A 322 -------------G--PNVVRFVTSFATTAEDVDHLLNQVRL 348 (356)
T ss_dssp -------------S--TTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred -------------C--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 1 46899999876665556666665553
No 124
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.92 E-value=1.9e-23 Score=218.93 Aligned_cols=290 Identities=13% Similarity=0.120 Sum_probs=200.8
Q ss_pred CCCccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc-------cCCCEEEEcCCCCcchHHH-------
Q 009167 200 ASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV-------PAGGHIVTTTDCYRKTRIF------- 265 (541)
Q Consensus 200 ~~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all-------~pGd~Vlv~~~~y~~~~~~------- 265 (541)
..|.|+++.++..+++++++++++|.+++++++||++|+..++..+. .++|+|++.++.|++....
T Consensus 68 ~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~ 147 (395)
T 3nx3_A 68 LLHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTAN 147 (395)
T ss_dssp CSCCCTTSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCC
T ss_pred ccccccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCC
Confidence 34667778899999999999999998889999999999999998765 4579999999999874321
Q ss_pred --HHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC-
Q 009167 266 --IETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP- 338 (541)
Q Consensus 266 --~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~- 338 (541)
+...+...+.++..++..|+++|++++++ ++++|++++++|++|.+.+ +++|.++|++||++||+||+|...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g 226 (395)
T 3nx3_A 148 EKYQKPFKPLISGVKFAKYNDISSVEKLVNE-KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMG 226 (395)
T ss_dssp HHHHGGGCSCCSCEEEECTTCHHHHHTTCCT-TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred cccccccCCCCCCcEEeCCCCHHHHHHhccC-CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCC
Confidence 11222334556777888899999999986 4999999999999999987 999999999999999999997632
Q ss_pred -----CcccccccCCcEEEECCccccCCCCCceEEEEEeChHH-HHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--HHH
Q 009167 339 -----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRV 410 (541)
Q Consensus 339 -----~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l-i~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~--~r~ 410 (541)
..........|++ +++|.+++ | ...|++++++++ ++.++..........++..+..+...++.+. ...
T Consensus 227 ~~g~~~~~~~~~~~~d~~--t~sK~~~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~ 302 (395)
T 3nx3_A 227 RSGKFFAYEHAQILPDIM--TSAKALGC-G-LSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKIL 302 (395)
T ss_dssp TTSSSSGGGGGTCCCSEE--EECGGGTT-T-SCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHH
T ss_pred cCCcchhHHhcCCCCCEE--EecccccC-C-CceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHH
Confidence 1122233345666 47799986 3 467899999988 7776543322233456666666666665432 223
Q ss_pred HHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccC
Q 009167 411 QQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 411 ~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G 486 (541)
++..++.+++.+.|++ +|.+..+ ++.|++++|++++. .....+.+.|...|+.++.+
T Consensus 303 ~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~ 363 (395)
T 3nx3_A 303 ENVNKLTPYLEQSLDELINEFDFCKKR------------------KGLGFMQGLSLDKS-VKVAKVIQKCQENALLLISC 363 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEECTT-SCHHHHHHHHHHTTEECEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EeEEEEEEEEeCCc-chHHHHHHHHHHCCCEEecC
Confidence 4444455555555443 3433221 23578999999753 23556677776566655433
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH----HHHHHHHHHHHhh
Q 009167 487 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF----EDLKADVLQALHA 540 (541)
Q Consensus 487 ~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~----edli~dL~~AL~~ 540 (541)
.++.|||+++...+ +.+++.|++++++
T Consensus 364 ---------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 364 ---------------------------GENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp ---------------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ---------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 14689998776544 4445555555543
No 125
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.92 E-value=1.8e-23 Score=222.26 Aligned_cols=288 Identities=14% Similarity=0.124 Sum_probs=192.9
Q ss_pred CCCch-hHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcc-cC
Q 009167 206 RYGNP-TTVVVEEKMSALEG----------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KM 273 (541)
Q Consensus 206 R~~~p-~~~~Le~~LA~l~g----------~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~-~~ 273 (541)
+|+.+ ...+||++||++++ .++++++++|++|+.+++.+++++||+|+++.+.|++... .+. ..
T Consensus 81 ~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~~ 156 (435)
T 3piu_A 81 LFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDR----DLKWRT 156 (435)
T ss_dssp HCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH----HTTTTT
T ss_pred ccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHH----HHHHhc
Confidence 44443 35789999999987 3567888888899999999999999999999999998653 333 56
Q ss_pred CeEEEEeCCC-------CHHHHHHhccC-----CCceEEEEeCCCCCCCccccH---HHHHHHHHhCCCEEEEeCCCCCC
Q 009167 274 GITATVIDPA-------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATP 338 (541)
Q Consensus 274 Gi~v~~vd~~-------d~e~Le~al~~-----~~tklV~lesP~NPtG~i~dl---~~Ia~la~~~gi~lIvDea~a~~ 338 (541)
|.++..++.+ |+++|++++++ .++++|++++|+||||.+++. ++|+++|++||++||+||+|+..
T Consensus 157 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 236 (435)
T 3piu_A 157 GVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGT 236 (435)
T ss_dssp CCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGG
T ss_pred CCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecccccc
Confidence 8888877643 78999998864 148999999999999999875 68888899999999999998652
Q ss_pred Cc-----cccc----c---------cCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHH-
Q 009167 339 LN-----QKAL----S---------LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYL- 398 (541)
Q Consensus 339 ~~-----~~~~----~---------~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l- 398 (541)
.. .... + .+.++++.|+||.+|.+| ...|++++ ++++.+.++.....++. ++.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 313 (435)
T 3piu_A 237 AFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSSFGLV--SSQTQHLL 313 (435)
T ss_dssp CCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGG-GCEEEEEESCHHHHHHHHHHGGGSCC--CHHHHHHH
T ss_pred ccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCc-eeEEEEEeCCHHHHHHHHHHhhcCCC--CHHHHHHH
Confidence 21 1111 1 223388999999997444 35788888 56677777665443332 2322222
Q ss_pred --HHHhHH----HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-----HH
Q 009167 399 --IIRGMK----TLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LT 467 (541)
Q Consensus 399 --~l~~l~----tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-----~~ 467 (541)
++...+ .+..+.++..++++.+.+.|+++ .+. +..+ ..|.++++.++.. ..
T Consensus 314 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~g~~~~~~l~~~~~~~~~~ 375 (435)
T 3piu_A 314 SAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GIS-CLNG----------------NAGLFCWVDMRHLLRSNTFE 375 (435)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCE-ECCC----------------CSSSEEEEECGGGSSSSSHH
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-ccCC----------------CeeEEEEEEcccccccCCch
Confidence 222222 12333445556777788888765 332 2111 1356889998641 11
Q ss_pred HHHHHHHHcc-CcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHHHHHh
Q 009167 468 ATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED---FEDLKADVLQALH 539 (541)
Q Consensus 468 ~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~---~edli~dL~~AL~ 539 (541)
...++.+.|. ..++.+..|..+.. ..++.+||+++..+ .+..++.|.++++
T Consensus 376 ~~~~~~~~l~~~~gi~v~~g~~~~~---------------------~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~ 430 (435)
T 3piu_A 376 AEMELWKKIVYEVHLNISPGSSCHC---------------------TEPGWFRVCFANLPERTLDLAMQRLKAFVG 430 (435)
T ss_dssp HHHHHHHHHHHTSCEECEEGGGGTC---------------------SSTTEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCEEEeCCcccCC---------------------CCCCEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 3456666653 34777776654321 13578999998643 3445555555554
No 126
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.92 E-value=3.5e-23 Score=218.85 Aligned_cols=288 Identities=10% Similarity=0.071 Sum_probs=192.4
Q ss_pred hhHHHHHHHHHHHhCCC--cEEEeCCHHHHHH--HHHHHhcc--C---------CCEEEEcCCCCcchHHHHHhhcccCC
Q 009167 210 PTTVVVEEKMSALEGAE--STVIMASGMSAST--VMLLALVP--A---------GGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~--~al~all~--p---------Gd~Vlv~~~~y~~~~~~~~~~l~~~G 274 (541)
+...+|+++||++++.+ +++++++|++++. +++.+++. + ||+|+++.|+|.+....+ ...|
T Consensus 70 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g 145 (423)
T 3ez1_A 70 AGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLL----QTLG 145 (423)
T ss_dssp TCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHH----HHHT
T ss_pred CChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHH----HHcC
Confidence 44679999999999873 5666666678997 88888887 7 599999999998866443 3457
Q ss_pred eEEEEeCC----CCHHHHHHhcc-CCCceEEEEe-CCCCCCCccccHH---HHHHHH-HhCCCEEEEeCCCCCCCcc---
Q 009167 275 ITATVIDP----ADMEGLEAALN-NNNVSLFFTE-SPTNPFLRCVDVK---LVSDLC-HKKGAIVCIDGTFATPLNQ--- 341 (541)
Q Consensus 275 i~v~~vd~----~d~e~Le~al~-~~~tklV~le-sP~NPtG~i~dl~---~Ia~la-~~~gi~lIvDea~a~~~~~--- 341 (541)
.++..++. .|+++|+++++ ..++++|+++ +|+||||.+++.+ +|+++| +++|++||+|++|......
T Consensus 146 ~~~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~ 225 (423)
T 3ez1_A 146 FELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEED 225 (423)
T ss_dssp CEEEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSS
T ss_pred CEEEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCC
Confidence 77766653 38999999994 2259999865 8899999999977 888888 8999999999998742111
Q ss_pred -----ccc-------ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH----
Q 009167 342 -----KAL-------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---- 405 (541)
Q Consensus 342 -----~~~-------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t---- 405 (541)
... ..+.++++.|+||.+. +| ...|++++++++++.++......+...++..+..+...++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 303 (423)
T 3ez1_A 226 RAEPVNFVVLARDAGYPDRAFVFASTSKITF-AG-AGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGG 303 (423)
T ss_dssp CCCCCCHHHHHHHHTCTTSEEEEEESTTTSC-SS-SSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTH
T ss_pred CCCCcchhhhhhccCCCCeEEEEeCchhhcc-CC-cceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccch
Confidence 111 2356799999999743 33 35789999999999988877666555566555554444443
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHh-CCCc---eEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc
Q 009167 406 ----LHLRVQQQNSTALRMAKILEA-HPKV---KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK 477 (541)
Q Consensus 406 ----l~~r~~~~~~~a~~la~~L~~-~p~v---~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~ 477 (541)
+....+...++.+.+.+.|.+ .+.+ ..+..|. .|.++++.+++. ....+.+.|.
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~--~~~~~~~~l~ 365 (423)
T 3ez1_A 304 LEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPK----------------GGYFISLDTAEP--VADRVVKLAE 365 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCS----------------BSSCEEEEESSS--CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCC----------------ccEEEEEECCCC--cHHHHHHHHH
Confidence 111122223344455555543 2221 1233332 467899999753 2455666666
Q ss_pred CcCeeccc-CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH---HHHHHHHHHHHh
Q 009167 478 IPYIAPSF-GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF---EDLKADVLQALH 539 (541)
Q Consensus 478 ~~~iavS~-G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~---edli~dL~~AL~ 539 (541)
..++.+.. |..+... .+..++.||||++..+. ++.++.|.++++
T Consensus 366 ~~gv~v~~~g~~~~~~------------------~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 413 (423)
T 3ez1_A 366 AAGVSLTPAGATYPAG------------------QDPHNRNLRLAPTRPPVEEVRTAMQVVAACIR 413 (423)
T ss_dssp HTTEECCCTTTTSSTT------------------CCSSSCEEEECCSSSCHHHHHHHHHHHHHHHH
T ss_pred HCCcEEecCcccccCC------------------CCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 67888887 4332110 01136799999986443 344555555554
No 127
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.92 E-value=2.1e-23 Score=216.26 Aligned_cols=168 Identities=14% Similarity=0.143 Sum_probs=135.2
Q ss_pred hhHHHHHHHHHHHhCCC---cEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC---
Q 009167 210 PTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e---~~i~-~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
+..+++++++++++|.+ +.++ ++||++|+.+++.+++++||+|+++.+.|.+.. .. ..+...|+++..++.
T Consensus 52 ~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~-~~-~~~~~~g~~~~~v~~~~~ 129 (376)
T 3f0h_A 52 STMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHR-FV-QLCEIHEIPYVALKLEHG 129 (376)
T ss_dssp HHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHH-HH-HHHHHTTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHH-HH-HHHHHcCCceEEEeCCCC
Confidence 56788999999999975 4555 456689999999999999999999998777633 22 344556777776653
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcEEEECCcccc
Q 009167 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (541)
Q Consensus 283 --~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDivv~S~sK~l 359 (541)
.|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+....++|+++.|+||++
T Consensus 130 ~~~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l 208 (376)
T 3f0h_A 130 KKLTKEKLYEYDNQ-NFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVL 208 (376)
T ss_dssp CCCCHHHHHTTTTS-CCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTT
T ss_pred CCCCHHHHHHhhcc-CceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccc
Confidence 389999998876 599999999999999999999999999999999999999875432 3334567899999999999
Q ss_pred CCCCCceEEEEEeChHHHHHHHH
Q 009167 360 GGHNDVLAGSISGSGKLVTQIRN 382 (541)
Q Consensus 360 gg~gd~~gG~lv~~~~li~~l~~ 382 (541)
+++.+ .|+++.++++++.+..
T Consensus 209 ~~~~G--~g~~~~~~~~~~~~~~ 229 (376)
T 3f0h_A 209 ACPPG--ISVIVLAPRGVERVEK 229 (376)
T ss_dssp CCCSS--CEEEEECHHHHHHHHT
T ss_pred cCCCc--eEEEEECHHHHHHhhc
Confidence 94432 5788899998887764
No 128
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.92 E-value=1e-23 Score=215.73 Aligned_cols=284 Identities=13% Similarity=0.107 Sum_probs=192.5
Q ss_pred hhHHHHHHHHHHHhCCC---c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC---
Q 009167 210 PTTVVVEEKMSALEGAE---S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e---~-~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
+..++++++|++++|.+ + .+++++|++|+.+++.++++ |+|++++++|++. . +...++..|.++..++.
T Consensus 33 ~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~-~-~~~~~~~~g~~~~~v~~~~~ 108 (353)
T 2yrr_A 33 RVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQ-R-VAEMAALHGLDPEVLDFPPG 108 (353)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHH-H-HHHHHHHTTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchH-H-HHHHHHHcCCceEEEeCCCC
Confidence 44789999999999973 4 45556677999999998876 8999999999875 2 22344566888877764
Q ss_pred --CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcEEEECCcccc
Q 009167 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFI 359 (541)
Q Consensus 283 --~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDivv~S~sK~l 359 (541)
.|+++|++++++.++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.. ......++|+++.|++|++
T Consensus 109 ~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 188 (353)
T 2yrr_A 109 EPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCL 188 (353)
T ss_dssp SCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTT
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccc
Confidence 4799999998752489999999999999999999999999999999999999864322 2223457899999999976
Q ss_pred CCCCCceEEEEEeChHHHHHHHH-------------H--hhhcCCCchHHHHHHHHHhHHH-----HHHHHHHHHHHHHH
Q 009167 360 GGHNDVLAGSISGSGKLVTQIRN-------------L--HHVLGGALNPNAAYLIIRGMKT-----LHLRVQQQNSTALR 419 (541)
Q Consensus 360 gg~gd~~gG~lv~~~~li~~l~~-------------~--~~~~G~~~s~~~a~l~l~~l~t-----l~~r~~~~~~~a~~ 419 (541)
+++.+ .|++++++++++.++. . .....++.+......+...++. +....++..+++++
T Consensus 189 ~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 266 (353)
T 2yrr_A 189 SAPPG--LAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAW 266 (353)
T ss_dssp CCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred cCCCc--eEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 65432 4899999988876541 0 1122233444433333333333 33445566677888
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcccc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
+.+.|++. ++. +..|. ...+.+++|.++.+ ....++.+.|...++.+..|..+
T Consensus 267 l~~~L~~~-g~~-~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~---------- 319 (353)
T 2yrr_A 267 VLEELKAR-GFR-PYPKA--------------SPLPTVLVVRPPEG-VDADRLVRALYAEGVAVAGGIGP---------- 319 (353)
T ss_dssp HHHHHHHT-TCE-ESCSS--------------SBCTTEEEEECCTT-CCHHHHHHHHHHTTEECEECCGG----------
T ss_pred HHHHHHHC-CCc-cccCc--------------cCCCeEEEEECCCC-CCHHHHHHHHHHCCEEEeCCccc----------
Confidence 88888875 443 22121 01356788988532 12455666666567777766421
Q ss_pred ccCCCHHHHHhcCCCCCeEEEEecC----CCHH-HHHHHHHHHHh
Q 009167 500 YWDLSQSERLKYGIMDNLVRFSFGV----EDFE-DLKADVLQALH 539 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~~~~IRlSvG~----e~~e-dli~dL~~AL~ 539 (541)
..++.+|||++. ++.+ .+++.|.++++
T Consensus 320 -------------~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 320 -------------TRGQVLRLGLMGEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp -------------GTTTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred -------------cCCCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 024689999932 2333 45555555554
No 129
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.91 E-value=3.1e-23 Score=219.58 Aligned_cols=306 Identities=15% Similarity=0.153 Sum_probs=184.0
Q ss_pred chhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcc-------------hHHH
Q 009167 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRK-------------TRIF 265 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all--------~pGd~Vlv~~~~y~~-------------~~~~ 265 (541)
.+..++++++||+++|.+ +++++++|++|+.+++.+++ ++||+|++..|.|++ +...
T Consensus 60 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~ 139 (432)
T 3a9z_A 60 KDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLP 139 (432)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHH
Confidence 345689999999999974 56777777899999999886 589877766666654 3333
Q ss_pred HHhhcccCCeEEEEeCC------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC----------CEE
Q 009167 266 IETVLPKMGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG----------AIV 329 (541)
Q Consensus 266 ~~~~l~~~Gi~v~~vd~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g----------i~l 329 (541)
+....+..|.++..++. .|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++| ++|
T Consensus 140 ~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~l 218 (432)
T 3a9z_A 140 LEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRP-TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLV 218 (432)
T ss_dssp HHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEE
T ss_pred HHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccC-CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEE
Confidence 43444556888888864 378999999987 4999999999999999999999999999999 999
Q ss_pred EEeCCCCCCCc-ccccccCCcEEEECCccccCCCCCceEEEEEeChHH-HHHHHHH-------hhhcCCCchHHHHHHHH
Q 009167 330 CIDGTFATPLN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNL-------HHVLGGALNPNAAYLII 400 (541)
Q Consensus 330 IvDea~a~~~~-~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l-i~~l~~~-------~~~~G~~~s~~~a~l~l 400 (541)
|+|++|+.+.. .+....+.|+++.|+||++| +. +|+++++++. ...++.. .....++.+....+.+.
T Consensus 219 ivDea~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 294 (432)
T 3a9z_A 219 HTDAAQALGKRRVDVEDLGVDFLTIVGHKFYG-PR---IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLG 294 (432)
T ss_dssp EEECTTTTTTSCCCHHHHCCSEEEEEGGGTTC-CS---CEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHH
T ss_pred EEEchhhhCCcccChhhcCCCEEEEehhHhcC-Cc---ceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHH
Confidence 99999876532 23334578999999999885 32 6888887654 2222211 11111233444333333
Q ss_pred HhHHHH----HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc
Q 009167 401 RGMKTL----HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL 476 (541)
Q Consensus 401 ~~l~tl----~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L 476 (541)
..++.+ ....++..++++++.+.|++.+.+. +.+++.. +. ....+++++|.+++.......+++.+
T Consensus 295 aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l 364 (432)
T 3a9z_A 295 KAADLVSENCETYEAHMRDIRDYLEERLEAEFGKR-IHLNSRF--PG-------VERLPNTCNFSIQGSQLRGYMVLAQC 364 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG-EEESSCC--TT-------CCBCTTEEEEEECSTTCCHHHHHHHC
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccCCc-EEEeCCC--Cc-------ccCCCCEEEEEeCCCCCcHHHHHHHh
Confidence 344433 2334445566677777776643332 2211100 00 01246688999874111234566666
Q ss_pred cCcCeecccCCcccccccCccccccCCCHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHH
Q 009167 477 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 477 ~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~----~~~IRlSvG~e~~edli~dL~~AL 538 (541)
. ++.++.|..+... +...........|+. ++.||||++..++++.++.+.++|
T Consensus 365 ~--~i~~~~G~~~~~~-------~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l 421 (432)
T 3a9z_A 365 Q--TLLASVGASCHSD-------HEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDL 421 (432)
T ss_dssp S--SEECBSSCGGGGG-------GTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHH
T ss_pred c--CeEEeccccccCC-------CCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHH
Confidence 4 6677777543221 000011222334543 479999999654444344444433
No 130
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.91 E-value=1.3e-22 Score=214.53 Aligned_cols=303 Identities=13% Similarity=0.122 Sum_probs=203.8
Q ss_pred hhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-----
Q 009167 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~----- 283 (541)
...+++++.+++++|.++.++++||++|+.+++.++ +++||+|+++.++|.++...+ ...|.++.+++.+
T Consensus 42 ~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~ 117 (418)
T 2c81_A 42 SMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATAV----LNVNALPVFVDVEADTYC 117 (418)
T ss_dssp CHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH----HHTTCEEEEECBCTTTCS
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHHH----HHcCCEEEEEecCCCCCC
Confidence 348899999999999988999999999999999999 899999999999999876443 3568888887643
Q ss_pred -CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc--cccccCCcEEEECC--ccc
Q 009167 284 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KALSLGADLVLHSA--TKF 358 (541)
Q Consensus 284 -d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~--~~~~~gaDivv~S~--sK~ 358 (541)
|+++|++++++ ++++|++ +||+|.+.|+++|.++|+++|++||+|++|+.+... .......|+++.|+ ||+
T Consensus 118 ~d~~~l~~~i~~-~~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~ 193 (418)
T 2c81_A 118 IDPQLIKSAITD-KTKAIIP---VHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKV 193 (418)
T ss_dssp BCHHHHGGGCCT-TEEEECC---BCCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred cCHHHHHHhhCC-CCeEEEE---eCCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcc
Confidence 79999999987 4999886 568999999999999999999999999998876421 22222246888887 999
Q ss_pred cCCCCCceEEEEEeC-hHHHHHHHHHhhh--------------cC------------CCchHHHHHHHHHhHHHHHHHHH
Q 009167 359 IGGHNDVLAGSISGS-GKLVTQIRNLHHV--------------LG------------GALNPNAAYLIIRGMKTLHLRVQ 411 (541)
Q Consensus 359 lgg~gd~~gG~lv~~-~~li~~l~~~~~~--------------~G------------~~~s~~~a~l~l~~l~tl~~r~~ 411 (541)
+++ | .+|+++.+ ++++++++..... +. ..+.+..+++....++.+..+.+
T Consensus 194 ~~~-g--~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~ 270 (418)
T 2c81_A 194 LTA-G--EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNA 270 (418)
T ss_dssp SCS-S--SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHHHHHH
T ss_pred cCC-C--CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 987 5 47898884 7787777653321 11 01334445554455666666777
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC----CHHHHHHHHHHccCc-Cee---c
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DLTATIKFIDALKIP-YIA---P 483 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~----~~~~~~~~l~~L~~~-~ia---v 483 (541)
+..++++++.+.|++.|.+.....|. .... ..-.++.|.+++ + ....++.+.|... ++. +
T Consensus 271 ~~~~~~~~l~~~L~~~~g~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gI~~~~v 338 (418)
T 2c81_A 271 IREKNAMFLNDALSKIDGIKVMKRPP---QVSR--------QTYYGYVFRFDPVKFGG-LNADQFCEILREKLNMGTFYL 338 (418)
T ss_dssp HHHHHHHHHHHHHTTSTTEEECCCCT---TEEE--------CCCSEEEEEECGGGTTT-CCHHHHHHHHHHHHTCCTTTE
T ss_pred HHHHHHHHHHHHhccCCCcccCCCCC---CCcc--------cccEEEEEEEccccccc-cCHHHHHHHHHHcCCCCcccc
Confidence 77788888999998877654221111 0000 011366678862 1 1345566666555 777 6
Q ss_pred ccCCcccccccCccccc------------------cCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHHhh
Q 009167 484 SFGGCESIVDQPAIMSY------------------WDLSQSERLKYGIMDNLVRFSFGVED-FEDLKADVLQALHA 540 (541)
Q Consensus 484 S~G~~~sl~~~pa~~~~------------------~~~~~~~~~~~gi~~~~IRlSvG~e~-~edli~dL~~AL~~ 540 (541)
+.|.. .+...|..... ..++..+. +..+.|||+++... +++.++.+.++|++
T Consensus 339 ~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lrl~~~~~~gt~edi~~~~~~l~~ 409 (418)
T 2c81_A 339 HPPYL-PVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSER----ASGQSIVIHHAILLAEPSHLSLLVDAVAE 409 (418)
T ss_dssp ECCCC-CGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHH----HHHHEEEEEGGGGGSCHHHHHHHHHHHHH
T ss_pred ccccc-ccccCchhcccccccccccccccccccccCCChHHHH----HHhCEEEecCCccCCCHHHHHHHHHHHHH
Confidence 66541 11111111000 00111000 11368999998766 66666666666653
No 131
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.91 E-value=9.4e-23 Score=208.98 Aligned_cols=265 Identities=14% Similarity=0.151 Sum_probs=187.0
Q ss_pred CCCchhHHHHHHHHHHHhC---C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 206 RYGNPTTVVVEEKMSALEG---A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g---~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+|+++...+++++||++++ . ++.+++++|++++.+++.++ ||+|+++ |+|++.... ++..|.++..+
T Consensus 52 ~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~---gd~Vl~~-p~y~~~~~~----~~~~g~~~~~v 123 (335)
T 1uu1_A 52 IYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF---DRSVFFP-PTYSCYRIF----AKAVGAKFLEV 123 (335)
T ss_dssp SCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS---SEEEECS-SSCHHHHHH----HHHHTCEEEEC
T ss_pred cCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh---CCcEEEC-CCcHHHHHH----HHHcCCeEEEe
Confidence 3445557899999999998 4 45677777789999999987 8999999 999886543 34457888777
Q ss_pred CCC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc---cc-ccccCCcEE
Q 009167 281 DPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QK-ALSLGADLV 351 (541)
Q Consensus 281 d~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~---~~-~~~~gaDiv 351 (541)
+.+ |+++| + ++++|++++|+||||.++|.++|.++++.+| ++|+|++|..... .. ....+.+++
T Consensus 124 ~~~~~~~~d~~~l-----~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~ 196 (335)
T 1uu1_A 124 PLTKDLRIPEVNV-----G-EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAV 196 (335)
T ss_dssp CCCTTSCCCCCCC-----C-TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEE
T ss_pred ccCCCCCCCHHHc-----C-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEE
Confidence 643 34444 3 4899999999999999999999999999889 9999999864211 11 122456899
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCC
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~---tl~~r~~~~~~~a~~la~~L~~~p 428 (541)
+.|+||++|.+| ...|++++++++++.++.....+ ..++..++.+...++ .+..+.++..++++.+.+.|+++
T Consensus 197 ~~s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~- 272 (335)
T 1uu1_A 197 IRTFSKAFSLAA-QRVGYVVASEKFIDAYNRVRLPF--NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM- 272 (335)
T ss_dssp EEESTTTTTCGG-GCCEEEEECHHHHHHHHHHSCTT--CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred EecchhhcCCcc-cCeEEEEeCHHHHHHHHHhcCCC--CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 999999998554 45799999999988887765433 345555544444444 34445566667788888888775
Q ss_pred CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHH
Q 009167 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
++. + +|. .|+++++.+++ ....++.+.|...++.++.
T Consensus 273 g~~-~-~~~----------------~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~----------------------- 309 (335)
T 1uu1_A 273 GYR-I-TDS----------------RGNFVFVFMEK--EEKERLLEHLRTKNVAVRS----------------------- 309 (335)
T ss_dssp TCC-B-CCC----------------CSSEEEEECCT--HHHHHHHHHHHHHTEEEEE-----------------------
T ss_pred CcE-E-cCC----------------CCeEEEEECCC--CCHHHHHHHHHHCCEEEEE-----------------------
Confidence 332 2 221 35688998864 3455666666555654432
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 509 LKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.++.+|||++.+ + .++.+.++|++
T Consensus 310 -----~~~~iRis~~~~--~-~i~~~~~~l~~ 333 (335)
T 1uu1_A 310 -----FREGVRITIGKR--E-ENDMILRELEV 333 (335)
T ss_dssp -----ETTEEEEECCCH--H-HHHHHHHHHHC
T ss_pred -----CCCeEEEEeCCH--H-HHHHHHHHHHh
Confidence 146899999852 3 36667777664
No 132
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.91 E-value=4.4e-23 Score=218.65 Aligned_cols=291 Identities=11% Similarity=0.063 Sum_probs=190.4
Q ss_pred CCCchh-HHHHHHHHHHHhCCC--cEEEeCCHHHHH--HHHHHHhccC------------CCEEEEcCCCCcchHHHHHh
Q 009167 206 RYGNPT-TVVVEEKMSALEGAE--STVIMASGMSAS--TVMLLALVPA------------GGHIVTTTDCYRKTRIFIET 268 (541)
Q Consensus 206 R~~~p~-~~~Le~~LA~l~g~e--~~i~~sSGs~Ai--~~al~all~p------------Gd~Vlv~~~~y~~~~~~~~~ 268 (541)
+|+.+. ..+||++||++++.+ ++++++++++++ .+++..+.++ ||+|+++.|+|++....+
T Consensus 71 ~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~-- 148 (422)
T 3d6k_A 71 NYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTIT-- 148 (422)
T ss_dssp SSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHH--
T ss_pred CCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHH--
Confidence 455544 789999999999874 444444555776 6667777666 348999999999866443
Q ss_pred hcccCCeEEEEeCC----CCHHHHHHhccCCCceEEE-EeCCCCCCCccccHH---HHHHHHH-hCCCEEEEeCCCCC--
Q 009167 269 VLPKMGITATVIDP----ADMEGLEAALNNNNVSLFF-TESPTNPFLRCVDVK---LVSDLCH-KKGAIVCIDGTFAT-- 337 (541)
Q Consensus 269 ~l~~~Gi~v~~vd~----~d~e~Le~al~~~~tklV~-lesP~NPtG~i~dl~---~Ia~la~-~~gi~lIvDea~a~-- 337 (541)
+..|.++..++. .|+++|++++++.++++|+ +++|+||||.+++.+ +|+++|+ ++|++||+||+|..
T Consensus 149 --~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~ 226 (422)
T 3d6k_A 149 --EHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHT 226 (422)
T ss_dssp --HHHTCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCB
T ss_pred --HHcCCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccc
Confidence 344777766653 4799999999753589988 689999999999976 7888888 89999999999873
Q ss_pred CCc----cccc--------ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH
Q 009167 338 PLN----QKAL--------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT 405 (541)
Q Consensus 338 ~~~----~~~~--------~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t 405 (541)
... ..++ ..+.++++.|+||+ +++| ...|++++++++++.+.......+...++..+..+...++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G-lriG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 304 (422)
T 3d6k_A 227 LSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAG-SGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGD 304 (422)
T ss_dssp SSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTT-SSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred cCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcc-cceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhC
Confidence 211 1111 23567999999998 4444 45799999999999888766655545555555544444432
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHH
Q 009167 406 -------LHLRVQQQNSTALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 474 (541)
Q Consensus 406 -------l~~r~~~~~~~a~~la~~L~~~----p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~ 474 (541)
+....+...++.+.+.+.|.++ +.+ .+..|. .|.++++.++.. ....+.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~-~~~~p~----------------~g~~~~~~~~~~--~~~~~~~ 365 (422)
T 3d6k_A 305 VAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVA-KWTSPT----------------GGYFISVDVVPG--TASRVVE 365 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCE-EECCCS----------------BSSCEEEEESTT--CHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCce-EEeCCC----------------cceEEEEECCCC--CHHHHHH
Confidence 2222233334555666666542 222 222331 467899999753 2345556
Q ss_pred HccCcCeecccCCc-ccccccCccccccCCCHHHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHh
Q 009167 475 ALKIPYIAPSFGGC-ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV---EDFEDLKADVLQALH 539 (541)
Q Consensus 475 ~L~~~~iavS~G~~-~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~---e~~edli~dL~~AL~ 539 (541)
.|...++.+..|+. +... + .-.++.||||++. ++.+..++.|.++++
T Consensus 366 ~l~~~gV~v~~~g~~f~~~--~----------------~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~ 416 (422)
T 3d6k_A 366 LAKEAGIALTGAGSSFPLH--N----------------DPNNENIRLAPSLPPVAELEVAMDGFATCVL 416 (422)
T ss_dssp HHHHTTEECCCTTTTSGGG--C----------------CTTSCEEEECCSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHCCeEEEcCccccCCC--C----------------CCCCCeEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 66667888887432 2110 0 0125789999995 234445555555554
No 133
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.91 E-value=1.4e-22 Score=220.33 Aligned_cols=287 Identities=13% Similarity=0.034 Sum_probs=190.0
Q ss_pred hHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g--------~e~~i~~sSGs~Ai~~al~all-~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+|++.++++++ .++++++++|++|+.+++.+++ .+||+|+++.|+|.+....+ ...|.++..++
T Consensus 135 G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~ 210 (500)
T 3tcm_A 135 GIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASI----ALHGGALVPYY 210 (500)
T ss_dssp CCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHH----HHTTCEEEEEE
T ss_pred ChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHH----HHcCCEEEEEe
Confidence 45677777777753 2567778888899999999998 89999999999999865443 44577776665
Q ss_pred -------CCCHHHHHHhccCC-----CceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc----
Q 009167 282 -------PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---- 342 (541)
Q Consensus 282 -------~~d~e~Le~al~~~-----~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~---- 342 (541)
..|+++|++++++. ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 211 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~ 290 (500)
T 3tcm_A 211 LNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKF 290 (500)
T ss_dssp CBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCC
T ss_pred cccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCC
Confidence 34899999998751 4899999999999999988 5567777999999999999987643211
Q ss_pred -cc-----cc------CCcEEEECCcccc-CCCCCceEEEEEe---ChHHHHHHHHHhhhcCCCchHHHHHHHHHh----
Q 009167 343 -AL-----SL------GADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIRG---- 402 (541)
Q Consensus 343 -~~-----~~------gaDivv~S~sK~l-gg~gd~~gG~lv~---~~~li~~l~~~~~~~G~~~s~~~a~l~l~~---- 402 (541)
.+ .. ...++++|+||.+ |..| ..+|++++ ++++++.+....... .+.+.....++...
T Consensus 291 ~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~q~~~~~~l~~~ 368 (500)
T 3tcm_A 291 HSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECG-KRGGYFEITGFSAPVREQIYKIASVN-LCSNITGQILASLVMNPP 368 (500)
T ss_dssp CCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGG-GCCEEEEEESCCTTHHHHHHHHHHTT-CCCCHHHHHHHHHHHSCC
T ss_pred CcHHHHHHHhccccCCeEEEEEecCCccCCCCCc-cceEEEEEeCCCHHHHHHHHHHHhcc-cCCCHHHHHHHHHHhcCc
Confidence 10 11 1137788999998 4333 45788887 888988887765432 23333333322222
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHH----
Q 009167 403 ----------MKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA---- 468 (541)
Q Consensus 403 ----------l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~---- 468 (541)
.+.+....++..++++.+.+.|++.|++.. ..|. .|.++++.+.-....
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~-~~~~----------------g~~~~~~~~~lp~~~~~~~ 431 (500)
T 3tcm_A 369 KASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITC-NEAE----------------GAMYVFPQICLPQKAIEAA 431 (500)
T ss_dssp CSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEC-CCCC----------------BTTEECCEECCCHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE-ecCC----------------eEEEEeeeecCchhhHHHH
Confidence 233444556667788889999988766532 1121 233445444322110
Q ss_pred -------HHH-HHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHH
Q 009167 469 -------TIK-FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQAL 538 (541)
Q Consensus 469 -------~~~-~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~--e~~edli~dL~~AL 538 (541)
... +.+.|+..++.+..|..+.. + ...+.+|+|++. ++.+..++.|.+++
T Consensus 432 ~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~---~-----------------~g~~~iRis~~~~~e~i~~~i~~l~~~~ 491 (500)
T 3tcm_A 432 KAANKAPDAFYALRLLESTGIVVVPGSGFGQ---V-----------------PGTWHFRCTILPQEDKIPAVISRFTVFH 491 (500)
T ss_dssp HHHTSCHHHHHHHHHHHHHCEECEESTTTCC---C-----------------TTCCBEEEESCSCTTTHHHHHHHHHHHH
T ss_pred HhcCCCcHHHHHHHHHHHCCEEEEeCcccCC---C-----------------CCCCEEEEEECCCHHHHHHHHHHHHHHH
Confidence 111 23445556788887765431 0 124689999984 34666777777776
Q ss_pred hh
Q 009167 539 HA 540 (541)
Q Consensus 539 ~~ 540 (541)
++
T Consensus 492 ~~ 493 (500)
T 3tcm_A 492 EA 493 (500)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 134
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.91 E-value=8.4e-23 Score=214.81 Aligned_cols=280 Identities=18% Similarity=0.190 Sum_probs=188.1
Q ss_pred chhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc------cCCCE-EEEcCCCCcchHHHHHhhcccC--CeEE
Q 009167 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV------PAGGH-IVTTTDCYRKTRIFIETVLPKM--GITA 277 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all------~pGd~-Vlv~~~~y~~~~~~~~~~l~~~--Gi~v 277 (541)
.+..++++++|++++|.+ +++++++|++++.+++.+++ ++||+ |+++.+.|+++...+....+.. |.++
T Consensus 70 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~ 149 (416)
T 1qz9_A 70 RDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTL 149 (416)
T ss_dssp GGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceE
Confidence 366789999999999974 56777777899988888776 89996 5566667876654443332333 8888
Q ss_pred EEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcEEEECCc
Q 009167 278 TVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (541)
Q Consensus 278 ~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDivv~S~s 356 (541)
..++. +++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. ......++|+++.|+|
T Consensus 150 ~~v~~--~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~ 226 (416)
T 1qz9_A 150 RLVDS--PEELPQAIDQ-DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTY 226 (416)
T ss_dssp EEESS--GGGHHHHCST-TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSS
T ss_pred EEeCc--HHHHHHHhCC-CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCc
Confidence 88887 8999999987 599999999999999999999999999999999999999875432 2223457899999999
Q ss_pred cccC-CCCCceE-EEEEeChHHHHHHHHHh-----------------------hhcCCCchHHHHHHHHHhHHH-----H
Q 009167 357 KFIG-GHNDVLA-GSISGSGKLVTQIRNLH-----------------------HVLGGALNPNAAYLIIRGMKT-----L 406 (541)
Q Consensus 357 K~lg-g~gd~~g-G~lv~~~~li~~l~~~~-----------------------~~~G~~~s~~~a~l~l~~l~t-----l 406 (541)
|+++ |.+ + |++++++++++.++... ....++.+......+...++. +
T Consensus 227 K~l~~g~~---~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 303 (416)
T 1qz9_A 227 KYLNGGPG---SQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDM 303 (416)
T ss_dssp STTCCCTT---CCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCH
T ss_pred ccCCCCCC---CeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCH
Confidence 9975 443 4 88888888766554311 111123344333333333333 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhC-C--CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeec
Q 009167 407 HLRVQQQNSTALRMAKILEAH-P--KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 483 (541)
Q Consensus 407 ~~r~~~~~~~a~~la~~L~~~-p--~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iav 483 (541)
....++..++++++.+.|++. | ++. +..|. .+ ...+++++|.+++ ...+.+.|...++.+
T Consensus 304 ~~~~~~~~~~~~~l~~~L~~~~~~~g~~-~~~~~---~~---------~~~~~~~~~~~~~----~~~l~~~l~~~gi~~ 366 (416)
T 1qz9_A 304 ASLRRKSLALTDLFIELVEQRCAAHELT-LVTPR---EH---------AKRGSHVSFEHPE----GYAVIQALIDRGVIG 366 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCE-ECSCS---SG---------GGBCSEEEEECTT----HHHHHHHHHTTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCeE-EeCCC---CH---------HHcCCEEEEecCC----HHHHHHHHHhCCcEe
Confidence 344556667778888888764 4 443 22221 00 0135789998863 345666665556543
Q ss_pred ccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec-CCCHHHHHHHHHHHH
Q 009167 484 SFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG-VEDFEDLKADVLQAL 538 (541)
Q Consensus 484 S~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG-~e~~edli~dL~~AL 538 (541)
.. ..++.||||++ ...+++.++.+.++|
T Consensus 367 ~~---------------------------~~~~~lRis~~~~~~t~~~i~~~~~~l 395 (416)
T 1qz9_A 367 DY---------------------------REPRIMRFGFTPLYTTFTEVWDAVQIL 395 (416)
T ss_dssp EE---------------------------ETTTEEEEECCTTTCCHHHHHHHHHHH
T ss_pred cc---------------------------CCCCeEEEeCcccCCCHHHHHHHHHHH
Confidence 11 02578999997 344444444444444
No 135
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.91 E-value=1e-22 Score=214.57 Aligned_cols=275 Identities=12% Similarity=0.077 Sum_probs=181.7
Q ss_pred hHHHHHHHHHHHh----CCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-
Q 009167 211 TTVVVEEKMSALE----GAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~e---~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~- 282 (541)
...+++++|++++ +.+ +++++++|++|+.+++.+++++||+|+++.|+|.+....+ +..|.++..++.
T Consensus 80 g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~ 155 (413)
T 3t18_A 80 GEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKIC----EEFGRNFKTFEFF 155 (413)
T ss_dssp CCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHH----HHHTCEEEEECCB
T ss_pred CCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHH----HHhCCeEEEeecc
Confidence 3456777777654 444 5667777779999999999999999999999998865433 445778877763
Q ss_pred -----CCHHHHHHhccCC---Cce-EEEEeCC-CCCCCccccHHHHH---HHHH------hCCCEEEEeCCCCCCCcc--
Q 009167 283 -----ADMEGLEAALNNN---NVS-LFFTESP-TNPFLRCVDVKLVS---DLCH------KKGAIVCIDGTFATPLNQ-- 341 (541)
Q Consensus 283 -----~d~e~Le~al~~~---~tk-lV~lesP-~NPtG~i~dl~~Ia---~la~------~~gi~lIvDea~a~~~~~-- 341 (541)
.|+++|++++++. +++ +|++++| +||||.++|.+++. ++|+ ++|++||+||+|......
T Consensus 156 ~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~ 235 (413)
T 3t18_A 156 TDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGD 235 (413)
T ss_dssp CTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSS
T ss_pred CCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChh
Confidence 2789999988641 266 8999999 99999999966555 5555 899999999997542211
Q ss_pred --cc-c----ccCCc---EEEECCccccCCCCCceEEEEEe---ChHHHHHHHHHhhhc--C--CCchHHHHHHHHHhHH
Q 009167 342 --KA-L----SLGAD---LVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHVL--G--GALNPNAAYLIIRGMK 404 (541)
Q Consensus 342 --~~-~----~~gaD---ivv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~~~~~~~--G--~~~s~~~a~l~l~~l~ 404 (541)
.. . ....+ +++.|+||.++.+| ...|++++ ++++++.+....... + ...+...+..+...++
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 314 (413)
T 3t18_A 236 QQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYG-LRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELER 314 (413)
T ss_dssp TTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGG-GCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTS
T ss_pred hHHHHHHHHhhcCCCeeEEEEEecCccCCCcC-cCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhc
Confidence 01 1 11222 78899999998665 45788888 889988887644321 1 2244444444433332
Q ss_pred H---------HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHH
Q 009167 405 T---------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA 475 (541)
Q Consensus 405 t---------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~ 475 (541)
. +....++..++.+.+.+.|++. ++. +..|. .|.++++.+. + ..++.+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~~----------------~~~~~~~~~~-~---~~~~~~~ 372 (413)
T 3t18_A 315 AENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLT-MIPYF----------------GGFFTFIPTD-K---AFDIVKD 372 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-CBCCC----------------SSSCEEEECS-C---HHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC-ccCCC----------------ceEEEEeCCC-C---HHHHHHH
Confidence 2 2223344556667777788765 221 11110 2335566653 2 2344455
Q ss_pred ccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 476 LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 476 L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
|...++.+..| ++.+|||++..+.+++++.|.++|++
T Consensus 373 l~~~gv~v~~g----------------------------~~~iRis~~~~~~~~~l~~l~~~l~~ 409 (413)
T 3t18_A 373 LEKENIFTIPS----------------------------AKGIRVAICGVGEEKIPKLVQRLAFY 409 (413)
T ss_dssp HHHTTEECEEC----------------------------SSEEEECTTTSCGGGHHHHHHHHHHH
T ss_pred HHhCCEEEecC----------------------------CCceEEEEeeCCHHHHHHHHHHHHHH
Confidence 55556665543 36799999976766668989888865
No 136
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.91 E-value=3e-22 Score=209.50 Aligned_cols=302 Identities=15% Similarity=0.131 Sum_probs=206.8
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-------ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-------l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
..+..+++|++||+++|.+++++++||++|+.+++.++ +++||+|+++.++|+++...+ ...|.++.++
T Consensus 32 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~----~~~g~~~~~~ 107 (390)
T 3b8x_A 32 MGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPL----QQYGLRVKFV 107 (390)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHH----HHTTCEEEEE
T ss_pred CChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEE
Confidence 47889999999999999999999999999999999998 889999999999999876544 3468888887
Q ss_pred CCC------CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCC--cEEE
Q 009167 281 DPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA--DLVL 352 (541)
Q Consensus 281 d~~------d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~ga--Divv 352 (541)
+.+ |+++|++++++ ++++|+++ |++|.+.|+++|.++|+++|+++|+|++++.+...+....|. |+.+
T Consensus 108 ~~~~~~~~~d~~~l~~~i~~-~~~~v~~~---~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~ 183 (390)
T 3b8x_A 108 DIDINTLNIDIESLKEAVTD-STKAILTV---NLLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNKCAGTFGLMGT 183 (390)
T ss_dssp CBCTTTCSBCHHHHHHHCCT-TEEEEEEE---CGGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTEETTSSSSEEE
T ss_pred ecCccccCcCHHHHHHHhCc-CCeEEEEE---CCccChhhHHHHHHHHHHcCCEEEEECcCcccCEECCcccccccceEE
Confidence 643 89999999987 49999986 466777999999999999999999999998655444444555 5555
Q ss_pred ECC--ccccCCCCCceEEEEEeCh-HHHHHHHHHhhh-----------------------------cCC--CchHHHHHH
Q 009167 353 HSA--TKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-----------------------------LGG--ALNPNAAYL 398 (541)
Q Consensus 353 ~S~--sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~-----------------------------~G~--~~s~~~a~l 398 (541)
.|+ +|.++++ .||++++++ ++.++++..... .|. .+++..+++
T Consensus 184 ~s~~~~k~~~~g---~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~ 260 (390)
T 3b8x_A 184 FSSFYSNHIATM---EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAI 260 (390)
T ss_dssp EECCTTSSSCSS---SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHH
T ss_pred EEccCCCCCccC---CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHH
Confidence 442 3434322 368888875 676666543310 111 156677777
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-HHHHHHHHHHcc
Q 009167 399 IIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALK 477 (541)
Q Consensus 399 ~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-~~~~~~~l~~L~ 477 (541)
++..++.+..+.++..++++++.+.|++.|.+. +..+. . .....++++.++.. ......+.+.|+
T Consensus 261 ~l~~l~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--~-----------~~~~~~~~i~~~~~~~~~~~~l~~~L~ 326 (390)
T 3b8x_A 261 GIEQLKKLPRFISVRRKNAEYFLDKFKDHPYLD-VQQET--G-----------ESSWFGFSFIIKKDSGVIRKQLVENLN 326 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE-ECCCC--S-----------BCCCCEEEEEECTTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-cCCCC--C-----------CcccEEEEEEecCcCcccHHHHHHHHH
Confidence 777788888888888889999999998877653 22111 0 01123466667520 012345666665
Q ss_pred CcCeecccCCccccccc-Cccc--cc---cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 478 IPYIAPSFGGCESIVDQ-PAIM--SY---WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 478 ~~~iavS~G~~~sl~~~-pa~~--~~---~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
..++.++.+-.-+...+ |... .| ..++..+. +..+.|||+++...+++.++.+.++|
T Consensus 327 ~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 327 SAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEY----LDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp HTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHH----HHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred HCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHH----HhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 56777664211111112 2111 11 11221111 12468999999999988888887765
No 137
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.91 E-value=4e-23 Score=216.18 Aligned_cols=282 Identities=15% Similarity=0.152 Sum_probs=190.1
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHH-HHHhhcc---------
Q 009167 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRI-FIETVLP--------- 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~-~~~~~l~--------- 271 (541)
.|..+..++++++|++++|. +++++++||++|+.+++.++. .+||+||+.++.|++... .+. ...
T Consensus 83 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~-~~g~~~~~~~~~ 161 (395)
T 1vef_A 83 TLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLS-VTWEPKYREPFL 161 (395)
T ss_dssp TSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHH-TCCCHHHHGGGC
T ss_pred ccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhh-hcCCcccccccC
Confidence 35788899999999999953 567888889999999998764 679999999999976432 221 111
Q ss_pred cCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCc------c
Q 009167 272 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN------Q 341 (541)
Q Consensus 272 ~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~------~ 341 (541)
....++..++..|+++|++++++ ++++|++++++||||.+.| +++|.++|++||++||+|++|+.... .
T Consensus 162 p~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~ 240 (395)
T 1vef_A 162 PLVEPVEFIPYNDVEALKRAVDE-ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAF 240 (395)
T ss_dssp SCSSCEEEECTTCHHHHHHHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTH
T ss_pred CCCCCeeEeCCCcHHHHHHHhcc-CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHh
Confidence 11112555666799999999986 5999999888899999988 99999999999999999999873211 1
Q ss_pred cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHH--HHHHHHHHHHH
Q 009167 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALR 419 (541)
Q Consensus 342 ~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~ 419 (541)
+....+.|++ |+||++++ | ...|++++++++++.++..........++..++.+...++.+.. ..++..++++.
T Consensus 241 ~~~~~~~d~~--s~sK~~~~-g-~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 316 (395)
T 1vef_A 241 EHFGIVPDIL--TLAKALGG-G-VPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPW 316 (395)
T ss_dssp HHHTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred hhcCCCCCEE--EEcccccC-C-CceEEEEehHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 2233457876 78999997 4 34688888887776654421112233456666555555655432 34455567777
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHcc-CcCeecccCCcccccccCccc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~ 498 (541)
+.+.|++.+. |.+ ....+.|++++|.++++ ..++.+.|. ..++.+..+
T Consensus 317 l~~~l~~~~~------~~~----------~~~~~~g~~~~~~~~~~---~~~l~~~l~~~~gi~v~~~------------ 365 (395)
T 1vef_A 317 FMEKLRAIPS------PKI----------REVRGMGLMVGLELKEK---AAPYIARLEKEHRVLALQA------------ 365 (395)
T ss_dssp HHHHHHTSCC------TTE----------EEEEEETTEEEEEESSC---SHHHHHHHHHHHCEECEES------------
T ss_pred HHHHHHHhhc------Cce----------EEEEEEEEEEEEEEcCh---HHHHHHHHHHHCCeEEecC------------
Confidence 7777776432 100 00122567999999753 344555554 456555432
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
.++.|||+++...+++.++.+.++|+
T Consensus 366 ---------------~~~~iRi~~~~~~~~~~i~~~~~~l~ 391 (395)
T 1vef_A 366 ---------------GPTVIRFLPPLVIEKEDLERVVEAVR 391 (395)
T ss_dssp ---------------STTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred ---------------CCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 14689999886655555555555554
No 138
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.90 E-value=1.2e-22 Score=214.42 Aligned_cols=275 Identities=13% Similarity=0.093 Sum_probs=177.5
Q ss_pred hHHHHHHHHHHHh----CCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-
Q 009167 211 TTVVVEEKMSALE----GAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~e---~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~- 282 (541)
...+|++++++++ +.+ +++++++|++|+.+++.+++++||+|+++.|+|.+... .+...|.++..++.
T Consensus 81 g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~v~~~ 156 (418)
T 3rq1_A 81 GIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRV----ICSDTGRTLVTYSLF 156 (418)
T ss_dssp CCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHH----HHHHTTCEEEEECSB
T ss_pred ChHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHH----HHHHcCCEEEEEeee
Confidence 3557777777755 445 56667777799999999999999999999999988654 34456888888763
Q ss_pred -----CCHHHHHHhccCC---Cce-EEEEeCC-CCCCCccccHHH---HHHHHH------hCCCEEEEeCCCCCCCccc-
Q 009167 283 -----ADMEGLEAALNNN---NVS-LFFTESP-TNPFLRCVDVKL---VSDLCH------KKGAIVCIDGTFATPLNQK- 342 (541)
Q Consensus 283 -----~d~e~Le~al~~~---~tk-lV~lesP-~NPtG~i~dl~~---Ia~la~------~~gi~lIvDea~a~~~~~~- 342 (541)
.|+++|++++++. +++ +|++++| +||||.++|.++ |+++|+ ++|++||+||+|.......
T Consensus 157 ~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~ 236 (418)
T 3rq1_A 157 DEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKD 236 (418)
T ss_dssp CTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHH
T ss_pred CCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChH
Confidence 2789999988741 255 8999999 999999999665 455555 8999999999986432210
Q ss_pred ---c-c----ccCCc---EEEECCccccCCCCCceEEEEEe---ChHHHHHHHHHhhhc----CCCchHHHHHHHHHhHH
Q 009167 343 ---A-L----SLGAD---LVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLHHVL----GGALNPNAAYLIIRGMK 404 (541)
Q Consensus 343 ---~-~----~~gaD---ivv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~~~~~~~----G~~~s~~~a~l~l~~l~ 404 (541)
. . ....+ +++.|+||.++.+| ...|++++ ++++++.++...... ...++...+..+...++
T Consensus 237 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 315 (418)
T 3rq1_A 237 EVRAFFNKFSHLPKEILTCVCYSLSKGFTMYG-QRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVA 315 (418)
T ss_dssp HHHGGGGGGTTCCTTEEEEEEEESTTTTTCCS-SCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCceEEEEEeCCCCCcCcC-CcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhC
Confidence 1 1 11223 78899999998665 34788887 888988887644321 12234444443333332
Q ss_pred H----------HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHH
Q 009167 405 T----------LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 474 (541)
Q Consensus 405 t----------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~ 474 (541)
. +....++..++++.+.+.|+++ ++. +..| ..|.++++.++ + ..+|.+
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----------------~~~~~~~~~~~-~---~~~~~~ 373 (418)
T 3rq1_A 316 DPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLP-MLPY----------------RGGFFITIPTD-S---ANAICE 373 (418)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCC-CCCC----------------CSSSEEEEECT-T---HHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-CCCC----------------CceEEEEcCCC-C---HHHHHH
Confidence 1 1122234445666677777664 221 1111 12345666664 2 334455
Q ss_pred HccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHHHHHhh
Q 009167 475 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED---FEDLKADVLQALHA 540 (541)
Q Consensus 475 ~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~---~edli~dL~~AL~~ 540 (541)
.|...++.+..| .+.+|||++..+ .+..++.|.+++++
T Consensus 374 ~l~~~gi~v~~g----------------------------~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 414 (418)
T 3rq1_A 374 ELKKEHIYVIAL----------------------------ANGIRIAACGIPKCQMTGLAEKIYNAMKS 414 (418)
T ss_dssp HHHHTTEECEEC----------------------------SSEEEEEGGGSCHHHHTTHHHHHHHHHHH
T ss_pred HHHhCCEEEecC----------------------------CCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 555556665543 257999988423 34456677777654
No 139
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.90 E-value=2.8e-23 Score=222.88 Aligned_cols=284 Identities=11% Similarity=0.074 Sum_probs=189.9
Q ss_pred hhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhccCCCE---EEEcCCCCcchHHHHHhhcccCCeEE-----EE
Q 009167 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGH---IVTTTDCYRKTRIFIETVLPKMGITA-----TV 279 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~pGd~---Vlv~~~~y~~~~~~~~~~l~~~Gi~v-----~~ 279 (541)
+..+++++++|+++|++ ++++++++++++.+++.+++++||. |+++.++|++....+...++..|+++ ..
T Consensus 111 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~ 190 (465)
T 3e9k_A 111 TGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMI 190 (465)
T ss_dssp GTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEE
T ss_pred HhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEE
Confidence 45678999999999984 5677777779999999999877655 99999999997765555556666653 23
Q ss_pred eCC-----CCHHHHHHhcc---CCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-ccccccCCcE
Q 009167 280 IDP-----ADMEGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADL 350 (541)
Q Consensus 280 vd~-----~d~e~Le~al~---~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~~~gaDi 350 (541)
.+. .|+++|+++++ + ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+..++++|+
T Consensus 191 ~~~~~~~~~d~~~l~~~i~~~~~-~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~ 269 (465)
T 3e9k_A 191 KPREGEETLRIEDILEVIEKEGD-SIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDF 269 (465)
T ss_dssp CCCTTCSSCCHHHHHHHHHHHGG-GEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCE
T ss_pred ecCCCCCccCHHHHHHHHHhcCC-CeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCE
Confidence 322 27999999996 4 599999999999999999999999999999999999999887543 3444578999
Q ss_pred EEECCccccC-CCCCceEEEEEeChHHHHHHHHHhh-------------------------hcCCCchHHHHHHHHHhHH
Q 009167 351 VLHSATKFIG-GHNDVLAGSISGSGKLVTQIRNLHH-------------------------VLGGALNPNAAYLIIRGMK 404 (541)
Q Consensus 351 vv~S~sK~lg-g~gd~~gG~lv~~~~li~~l~~~~~-------------------------~~G~~~s~~~a~l~l~~l~ 404 (541)
++.|++|+++ |++ ..|+++.++++++.+..... ...++.+......+..+++
T Consensus 270 ~~~s~~K~l~~gp~--~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~ 347 (465)
T 3e9k_A 270 ACWCSYKYLNAGAG--GIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLE 347 (465)
T ss_dssp EEECSSSTTCCCTT--CCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHH
T ss_pred EEECcccccccCCC--ceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHH
Confidence 9999999994 443 13677778777654431100 0011334433333333443
Q ss_pred HH-----HHHHHHHHHHHHHHHHHHHhC----------CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHH
Q 009167 405 TL-----HLRVQQQNSTALRMAKILEAH----------PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 469 (541)
Q Consensus 405 tl-----~~r~~~~~~~a~~la~~L~~~----------p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~ 469 (541)
.+ ....++..+++.++.+.|+++ +.++ +..|. .+ ...|++++|.++.+ .
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~-~~~p~---~~---------~~~g~~~~~~~~~~---~ 411 (465)
T 3e9k_A 348 IFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVN-IITPS---HV---------EERGCQLTITFSVP---N 411 (465)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEE-ECSCS---SG---------GGBCSCEEEEECCT---T
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeE-EeCCC---CH---------hhcccEEEEEecCC---H
Confidence 32 333445556667777777763 3332 22221 01 12578999998732 2
Q ss_pred HHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEe-cCCCHHHHHHHHHHHHh
Q 009167 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GVEDFEDLKADVLQALH 539 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv-G~e~~edli~dL~~AL~ 539 (541)
..+.+.|...++.+.++ .++.||||+ +..++++.++.+.++|+
T Consensus 412 ~~l~~~L~~~Gi~v~~~---------------------------~~~~iRis~~~~~~t~edi~~~~~~l~ 455 (465)
T 3e9k_A 412 KDVFQELEKRGVVCDKR---------------------------NPNGIRVAPVPLYNSFHDVYKFTNLLT 455 (465)
T ss_dssp CCHHHHHHTTTEECEEE---------------------------TTTEEEEBCCTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEecC---------------------------CCCEEEEeCcccCCCHHHHHHHHHHHH
Confidence 34555555556654411 247899998 56655555555555444
No 140
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.90 E-value=8.2e-23 Score=217.83 Aligned_cols=283 Identities=12% Similarity=0.053 Sum_probs=180.8
Q ss_pred hhHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE-------
Q 009167 210 PTTVVVEEKMSALE----GA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT------- 276 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~------- 276 (541)
+...+|+++|++++ +. +..+++++|++++.++ .+++++||+|+++.|+|++....+. ..|.+
T Consensus 111 ~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~g~~~~~~ 185 (449)
T 3qgu_A 111 QGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSV----MMGMTGDHNGTG 185 (449)
T ss_dssp TCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHH----HHTCSCCBCSSS
T ss_pred CCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHH----HcCCcccccccc
Confidence 45789999999998 43 4566666777999888 8889999999999999998765443 23444
Q ss_pred ---EEEeCCCCHHHHHHhccC-CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-----ccc
Q 009167 277 ---ATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL 344 (541)
Q Consensus 277 ---v~~vd~~d~e~Le~al~~-~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-----~~~ 344 (541)
+..++.++.+.+...+.+ .++++|++++|+||||.+++ +++|+++|+++|++||+||+|...... ...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~ 265 (449)
T 3qgu_A 186 FDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIY 265 (449)
T ss_dssp BTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGG
T ss_pred cceeEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHh
Confidence 555554322222111111 25899999999999999997 678888899999999999998753211 111
Q ss_pred c----cCCcEEEECCccccCCCCCceEEEEEeChHHHH--------HHHHHhhhcCCCchHHHHHHHHHhH-----HHHH
Q 009167 345 S----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVT--------QIRNLHHVLGGALNPNAAYLIIRGM-----KTLH 407 (541)
Q Consensus 345 ~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~--------~l~~~~~~~G~~~s~~~a~l~l~~l-----~tl~ 407 (541)
. .+.++++.|+||.+|..| ...|++++++++++ .+...........++..+..+...+ +.+.
T Consensus 266 ~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 344 (449)
T 3qgu_A 266 EIPGADEVAIETCSFSKYAGFTG-VRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMN 344 (449)
T ss_dssp GSTTGGGTEEEEEECSGGGTCTT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHH
T ss_pred hccCCCCcEEEEecchhhcCCcc-ceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHH
Confidence 1 346799999999998554 35789998887654 3333332222234444444333333 3344
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccC-cCeecccC
Q 009167 408 LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFG 486 (541)
Q Consensus 408 ~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~-~~iavS~G 486 (541)
...++..++++.+.+.|+++ ++... .| ..|.++++.+++ ....++.+.|.. .++.+..|
T Consensus 345 ~~~~~~~~~~~~l~~~L~~~-g~~~~-~~----------------~~~~~~~~~~~~--~~~~~~~~~l~~~~gI~v~pg 404 (449)
T 3qgu_A 345 AMIKFYKENAQILKTTFTEM-GFSVY-GG----------------DDAPYIWVGFPG--KPSWDVFAEILERCNIVTTPG 404 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCEE-ES----------------SSSSEEEEECTT--SCHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCeee-CC----------------CCeeEEEEECCC--CCHHHHHHHHHHHCCEEEecc
Confidence 55566677888888888876 33211 11 136688999872 123344444432 37777776
Q ss_pred CcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009167 487 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 539 (541)
Q Consensus 487 ~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~--e~~edli~dL~~AL~ 539 (541)
..+.. ..++.||||+.. ++.++.++.|.++++
T Consensus 405 ~~f~~---------------------~~~~~iRis~~~~~e~i~~~l~~l~~~~~ 438 (449)
T 3qgu_A 405 SGYGP---------------------AGEGFVRASAFGSRENILEAVRRFKEAYG 438 (449)
T ss_dssp GGGCG---------------------GGTTEEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred hHhCC---------------------CCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 54321 025799999865 233444555555543
No 141
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.90 E-value=5.9e-22 Score=211.04 Aligned_cols=310 Identities=14% Similarity=0.121 Sum_probs=206.0
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh---------ccCCCEEEEcCCCCcchHHHHHhhcccCCeEE
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al---------l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v 277 (541)
+..+...++|++||+++|.+++++++||++|+.+++.++ +++||+|+++.++|+++...+ ...|.++
T Consensus 59 ~~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~ 134 (437)
T 3bb8_A 59 TTGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPT----IQNGLIP 134 (437)
T ss_dssp BSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHH----HHTTCEE
T ss_pred CCChHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHH----HHcCCEE
Confidence 456789999999999999999999999999999999998 889999999999999876544 3368888
Q ss_pred EEeCCC------CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccC--Cc
Q 009167 278 TVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--AD 349 (541)
Q Consensus 278 ~~vd~~------d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~g--aD 349 (541)
.+++.+ |+++|++++++ ++++|++++ ++|...|+++|.++|+++|++||+|++++.+...+....+ .|
T Consensus 135 ~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d 210 (437)
T 3bb8_A 135 VFVDVDIPTYNVNASLIEAAVSD-KTKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFGD 210 (437)
T ss_dssp EECCEETTTTEECGGGHHHHCCT-TEEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSS
T ss_pred EEEeccCccCCcCHHHHHHhcCC-CCeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceECCeecccccC
Confidence 887643 79999999987 499999964 3455589999999999999999999999865433333345 79
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHH-HHHHhhh-------------------------------------cC--C
Q 009167 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQ-IRNLHHV-------------------------------------LG--G 389 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~-l~~~~~~-------------------------------------~G--~ 389 (541)
+++.|++|..+-++ ..+|+++++++.+.. ++..... .| .
T Consensus 211 ~~~~s~~~~k~l~~-g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 289 (437)
T 3bb8_A 211 IGTVSFYPAKHITM-GEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNL 289 (437)
T ss_dssp EEEEECSTTSSSCC-SSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBC
T ss_pred EEEEECcCCcCCCC-CCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCccc
Confidence 99888755443322 247999988655443 3221100 11 1
Q ss_pred CchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcc-cEEEEEEcCCHHH
Q 009167 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFG-GVVSFEVDGDLTA 468 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g-~~vsf~l~~~~~~ 468 (541)
.+++..+.+++..++.+..+++++.++++++.+.|++.+.+.. +|...... ..+.. .++.|..+.+ ..
T Consensus 290 ~~~~~~aa~~l~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~--~~~~~~~~--------~~~~~~~~~~~~~~~~-~~ 358 (437)
T 3bb8_A 290 KITDMQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADFIE--LPEATENS--------DPSWFGFPITLKEDSG-VS 358 (437)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTTTEE--CCCCCTTE--------ECCCSSEEEEECGGGS-SC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccc--cCCCCCCC--------ceeeEEEEEEECCcCc-Cc
Confidence 1346666666666777777777788888888888888765432 33211000 00111 1334443211 12
Q ss_pred HHHHHHHccCcCeecccCCcccccccCcccc-----ccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 469 TIKFIDALKIPYIAPSFGGCESIVDQPAIMS-----YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 469 ~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~-----~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
...+.+.|...+|.++.+....+..+|.... ...++...+. ..+.|||+++...+++.++.+.++|.+
T Consensus 359 ~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~lrl~~~~~~t~~di~~i~~~l~~ 431 (437)
T 3bb8_A 359 RIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRI----MNQTFWIGIYPGLTHDHLDYVVSKFEE 431 (437)
T ss_dssp HHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHH----HHHEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHH----hcCEEEecCCCCCCHHHHHHHHHHHHH
Confidence 4556667766688777664321111221100 0112221111 235799999998888888888887764
No 142
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.90 E-value=2.7e-22 Score=218.27 Aligned_cols=275 Identities=12% Similarity=0.057 Sum_probs=192.3
Q ss_pred HHHHHHHHHHhCCC----cE--EEeCCHHHHHHHHHHHhccCC--------CEEEEcCCCCcchHHHHHhhcccCCeEEE
Q 009167 213 VVVEEKMSALEGAE----ST--VIMASGMSASTVMLLALVPAG--------GHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (541)
Q Consensus 213 ~~Le~~LA~l~g~e----~~--i~~sSGs~Ai~~al~all~pG--------d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~ 278 (541)
+++++.+++++|.+ .+ +++++|++|+.++++++.++| |+|+++.+.|.+.... +...|++++
T Consensus 142 ~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~----~~~~G~~v~ 217 (514)
T 3mad_A 142 AEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKA----AQYFGIKLV 217 (514)
T ss_dssp HHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHH----HHHHTCEEE
T ss_pred HHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHH----HHHcCCeeE
Confidence 34556678888875 44 888888999999999988776 9999999999986543 344588888
Q ss_pred EeCCC-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc------------c
Q 009167 279 VIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------------Q 341 (541)
Q Consensus 279 ~vd~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~------------~ 341 (541)
.++.+ |+++|++++++ ++++|++++|+||+|.+.|+++|.++|++||++||+|++|+.+.. .
T Consensus 218 ~v~~~~~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~ 296 (514)
T 3mad_A 218 RTPLDADYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPF 296 (514)
T ss_dssp EECBCTTSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCC
T ss_pred EeeeCCCCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcc
Confidence 88754 89999999987 499999999999999999999999999999999999999875432 2
Q ss_pred cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-h-----------hhcCCCch--HHHHHHHHHhH--HH
Q 009167 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-H-----------HVLGGALN--PNAAYLIIRGM--KT 405 (541)
Q Consensus 342 ~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-~-----------~~~G~~~s--~~~a~l~l~~l--~t 405 (541)
+....|+|+++.|++|+++++. ..|+++.+++........ . ...|.... ...++.+++.+ ..
T Consensus 297 ~~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~ 374 (514)
T 3mad_A 297 DFRLEGVTSVSADTHKYGYGAK--GTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEG 374 (514)
T ss_dssp STTSTTCCEEEECTTTTTCCCS--SCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcEEEECchhccCCCC--CeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHH
Confidence 2234578999999999965443 257776665544332110 0 00112111 23444444433 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeeccc
Q 009167 406 LHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 485 (541)
Q Consensus 406 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~ 485 (541)
+...+++..++++++.+.|++.+.+..+ .+ ..++++|..++ ....++.+.|...|+.+ .
T Consensus 375 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~-----------------~~~~~~~~~~~--~~~~~l~~~L~~~Gi~v-~ 433 (514)
T 3mad_A 375 YLDATRRILQAADRLKAGVRAIPSLKIL-GD-----------------PLWVIAVASDE--LNIYQVMEEMAGRGWRL-N 433 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTCEES-SC-----------------CSSEEEEECSS--SCHHHHHHHHHTTTCBC-E
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEe-CC-----------------CeEEEEEeCCC--CCHHHHHHHHHhcCCEe-c
Confidence 4566777888899999999987766422 22 12478887753 23455666666555443 1
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec-----CCCHHHHHHHHHHHHhh
Q 009167 486 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG-----VEDFEDLKADVLQALHA 540 (541)
Q Consensus 486 G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG-----~e~~edli~dL~~AL~~ 540 (541)
| . + .++.+|++++ .++.+++++.|.+++++
T Consensus 434 g-~-----------------------~-~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~ 468 (514)
T 3mad_A 434 G-L-----------------------H-RPPAFHVALTLRHTEPGVVDRFLADLQDAVAQ 468 (514)
T ss_dssp E-E-----------------------T-TTTEEEEECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred c-C-----------------------C-CCCeEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 1 0 0 1357999987 35677888888887753
No 143
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.90 E-value=7.3e-22 Score=210.53 Aligned_cols=288 Identities=15% Similarity=0.152 Sum_probs=183.1
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc---------cCC-CEEEEcCCCCcchHHHHHhhcc-----
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PAG-GHIVTTTDCYRKTRIFIETVLP----- 271 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all---------~pG-d~Vlv~~~~y~~~~~~~~~~l~----- 271 (541)
+.++...+|+++|++++|.+.+++++||++|+.+++..+. .+| |+||+.++.|++..........
T Consensus 104 ~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~ 183 (433)
T 1z7d_A 104 FFSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCT 183 (433)
T ss_dssp SEEHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC------------------
T ss_pred cCCHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCcccc
Confidence 5678899999999999998889999999999999998753 467 9999999999875321111111
Q ss_pred ----cCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccc----cHHHHHHHHHhCCCEEEEeCCCCCCCc---
Q 009167 272 ----KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (541)
Q Consensus 272 ----~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~----dl~~Ia~la~~~gi~lIvDea~a~~~~--- 340 (541)
.....+..++..|+++|+++++..++++|++|.++|++|.+. ++++|.++|++||++||+||++.....
T Consensus 184 ~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~ 263 (433)
T 1z7d_A 184 SNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK 263 (433)
T ss_dssp --------CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred ccCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc
Confidence 111345667778999999999423589999987778899876 699999999999999999999863211
Q ss_pred ---ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHH--HHHHHHH
Q 009167 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNS 415 (541)
Q Consensus 341 ---~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~--r~~~~~~ 415 (541)
........|++ |++|.++++ ...+|++++++++++.+...........++..++.+...++.+.. ..++..+
T Consensus 264 ~~~~~~~~~~~di~--t~sK~l~~G-~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 340 (433)
T 1z7d_A 264 LLCVHHYNVKPDVI--LLGKALSGG-HYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEK 340 (433)
T ss_dssp SSGGGGGTCCCSEE--EECGGGGTT-SSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred chhhHhcCCCCCEE--EECccccCC-CCCeEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 12223457876 688999853 235799999998877665422112223456666666666665432 3444555
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccC
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
+.+++.+.|++... .+|.. ...++.|++++|+++.......++.+.|...++.+..+
T Consensus 341 ~~~~l~~~L~~l~~----~~~~~----------~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~--------- 397 (433)
T 1z7d_A 341 LGGPFLENLKRELK----DSKIV----------RDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDV--------- 397 (433)
T ss_dssp HHHHHHHHHHHHHT----TCTTE----------EEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEE---------
T ss_pred HHHHHHHHHHHHHH----hCCCe----------EEEEeeeeEEEEEEccChhHHHHHHHHHHHCCeEEecC---------
Confidence 66666666654200 01110 01134678999999742112455666665556554421
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
.++.|||+++...+++.++.+.++|
T Consensus 398 ------------------~~~~iRi~~~~~~t~e~i~~~l~~l 422 (433)
T 1z7d_A 398 ------------------HDKTIRLTPPLCITKEQLDECTEII 422 (433)
T ss_dssp ------------------TTTEEEECCCTTCCHHHHHHHHHHH
T ss_pred ------------------CCCEEEEECCcCCCHHHHHHHHHHH
Confidence 1468999987654444444443333
No 144
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.90 E-value=4.7e-22 Score=216.32 Aligned_cols=284 Identities=14% Similarity=0.027 Sum_probs=192.8
Q ss_pred HHHHHHHHHhCCC-------cEEEeCCHHHHHHHHHHHhccC--------CC-----EEEEcCCCCcchHHHHHhhcccC
Q 009167 214 VVEEKMSALEGAE-------STVIMASGMSASTVMLLALVPA--------GG-----HIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 214 ~Le~~LA~l~g~e-------~~i~~sSGs~Ai~~al~all~p--------Gd-----~Vlv~~~~y~~~~~~~~~~l~~~ 273 (541)
++++.|++++|.+ ..+++++|++|+.+++.++..+ || +|+++.+.|..... .+...
T Consensus 99 ~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~----~~~~~ 174 (502)
T 3hbx_A 99 RCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEK----FARYF 174 (502)
T ss_dssp HHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHH----HHHHT
T ss_pred HHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHH----HHHHc
Confidence 5566788999876 3456889999999998887655 77 99999999987543 34556
Q ss_pred CeEEEEeCCC------CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC------CCEEEEeCCCCCCCc-
Q 009167 274 GITATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATPLN- 340 (541)
Q Consensus 274 Gi~v~~vd~~------d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~------gi~lIvDea~a~~~~- 340 (541)
|++++.++.+ |+++|+++++++ +++|++++|+||||.+.|+++|.++|+++ |++||+|++|+.+..
T Consensus 175 G~~~~~v~~~~~~~~~d~~~l~~~i~~~-t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p 253 (502)
T 3hbx_A 175 EVELKEVKLSEGYYVMDPQQAVDMVDEN-TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAP 253 (502)
T ss_dssp TCEEEEECCBTTBCSCCHHHHHHHCCTT-EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHH
T ss_pred CceeEEEecCCCcCcCCHHHHHHHHhhC-CEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhh
Confidence 8888888632 899999999884 99999999999999999999999999999 999999999874321
Q ss_pred --ccc-----cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH-HhhhcCC----------C--chHHHHHHHH
Q 009167 341 --QKA-----LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LHHVLGG----------A--LNPNAAYLII 400 (541)
Q Consensus 341 --~~~-----~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~-~~~~~G~----------~--~s~~~a~l~l 400 (541)
... ...++|++..|+||+++++.+. |++++.+++++..... .....+. . ......|.++
T Consensus 254 ~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~-G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al 332 (502)
T 3hbx_A 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGI-GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (502)
T ss_dssp HHCTTCCCSTTSTTEEEEEEETTTTTCCCSSC-EEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHH
T ss_pred hhCcccccccCCCCceEEEECcccccCCCCCe-EEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHH
Confidence 111 1237899999999999665532 3344444544422111 0011111 1 1234445544
Q ss_pred H--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-HHHHHHHHHcc
Q 009167 401 R--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALK 477 (541)
Q Consensus 401 ~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-~~~~~~l~~L~ 477 (541)
+ +.+.+..++++..++++++.+.|++++.++.+.. . + ..+++.|.++++. .....+.+.|.
T Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~----~-----------~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (502)
T 3hbx_A 333 IRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSK-D----E-----------GVPLVAFSLKDSSCHTEFEISDMLR 396 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSC-S----S-----------SSSEEEEEESSCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeC-C----C-----------CceEEEEEecCCCcCCHHHHHHHHH
Confidence 4 3455677888888999999999999887654322 0 0 2468999997531 23346677777
Q ss_pred CcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009167 478 IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 478 ~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~ 539 (541)
..|+.++.. ..|... .....+||+++. |+.++++++|+++++
T Consensus 397 ~~Gi~v~~~------~~p~~~--------------~~~~~lRisv~~~~t~edid~li~~L~~~l~ 442 (502)
T 3hbx_A 397 RYGWIVPAY------TMPPNA--------------QHITVLRVVIREDFSRTLAERLVIDIEKVMR 442 (502)
T ss_dssp TTTCBCCEE------ECCTTC--------------TTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred hCCcEEeec------cCCccc--------------CCceEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 666554321 112110 024589999985 445666666666665
No 145
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.90 E-value=2e-21 Score=205.87 Aligned_cols=252 Identities=16% Similarity=0.179 Sum_probs=181.3
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-----
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~----- 283 (541)
.+...+||++|++++|.++++++++|++|+.+++.++. +||+|+++.++|+++... +...|.++.+++.+
T Consensus 51 ~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~----~~~~G~~~~~v~~~~~~~~ 125 (424)
T 2po3_A 51 GPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAG-LTGEVIMPSMTFAATPHA----LRWIGLTPVFADIDPDTGN 125 (424)
T ss_dssp CHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHT-CCSEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTTSS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC-CCCEEEECCCccHHHHHH----HHHcCCEEEEEecCCCcCC
Confidence 37889999999999999889999999999999999875 789999999999987643 34468888887643
Q ss_pred -CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc--cccccCCcEEEECCc--cc
Q 009167 284 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KALSLGADLVLHSAT--KF 358 (541)
Q Consensus 284 -d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~--~~~~~gaDivv~S~s--K~ 358 (541)
|+++|++++++ ++++|+++ ||+|.+.++++|.++|+++|++||+|++|+.+... .+.....|+++.|+| |.
T Consensus 126 ~d~~~l~~~i~~-~~~~v~~~---~~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~ 201 (424)
T 2po3_A 126 LDPDQVAAAVTP-RTSAVVGV---HLWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKA 201 (424)
T ss_dssp BCHHHHGGGCCT-TEEEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred cCHHHHHHhhCc-CCcEEEEE---CCCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCC
Confidence 78999999987 59999984 58999999999999999999999999998854322 222223589999998 88
Q ss_pred cCCCCCceEEEEEeC-hHHHHHHHHHhhhc----------C--CCchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 009167 359 IGGHNDVLAGSISGS-GKLVTQIRNLHHVL----------G--GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE 425 (541)
Q Consensus 359 lgg~gd~~gG~lv~~-~~li~~l~~~~~~~----------G--~~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~ 425 (541)
++|. .+|+++++ +++++.++...... | ..+++..+++++..++.+....++..++++++.+.|+
T Consensus 202 l~~~---~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 278 (424)
T 2po3_A 202 VNAF---EGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYREHLA 278 (424)
T ss_dssp SCCS---SCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCC---CCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8763 47999998 78888877644321 1 1345666666666666666666677777778888887
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC---CHHHHHHHHHHccCcCeeccc
Q 009167 426 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLTATIKFIDALKIPYIAPSF 485 (541)
Q Consensus 426 ~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~---~~~~~~~~l~~L~~~~iavS~ 485 (541)
+.|.+..+..|.- . .....++++.++. + .....+.+.|...++.++.
T Consensus 279 ~~~g~~~~~~~~~-~-----------~~~~~~~~i~~~~~~~~-~~~~~l~~~L~~~gI~v~~ 328 (424)
T 2po3_A 279 DLPGVLVADHDRH-G-----------LNNHQYVIVEIDEATTG-IHRDLVMEVLKAEGVHTRA 328 (424)
T ss_dssp SCTTEEECCGGGG-S-----------CCCCCCEEEEECHHHHS-SCHHHHHHHHHHTTEECBC
T ss_pred cCCCccccCCCCC-C-----------ccccEEEEEEECCccch-hhHHHHHHHHHHCCCceec
Confidence 6655432111100 0 0012467787762 1 1234556666556766654
No 146
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.90 E-value=6e-23 Score=215.18 Aligned_cols=286 Identities=13% Similarity=0.118 Sum_probs=189.4
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc------C-CCEEEEcCCCCcchHH-HHHhhcccC----C
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP------A-GGHIVTTTDCYRKTRI-FIETVLPKM----G 274 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~------p-Gd~Vlv~~~~y~~~~~-~~~~~l~~~----G 274 (541)
|..+..++++++|++++|.+++++++||++|+.+++..+.. + +++|++.++.|++... .+. ..... +
T Consensus 79 ~~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~-~~g~~~~~~~ 157 (397)
T 2ord_A 79 FWNRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLT-ATGQPKYQKP 157 (397)
T ss_dssp SEEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHH-HSBCHHHHGG
T ss_pred cCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhh-ccCChhhccc
Confidence 56788999999999999988889999999999999988753 5 4789999999977433 222 11110 0
Q ss_pred -----eEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCc-c---ccHHHHHHHHHhCCCEEEEeCCCCCCCc-cc--
Q 009167 275 -----ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR-C---VDVKLVSDLCHKKGAIVCIDGTFATPLN-QK-- 342 (541)
Q Consensus 275 -----i~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~-i---~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~-- 342 (541)
..+..++..|+++|++++++ ++++|++++|+||||. + .++++|.++|+++|++||+||+|..... ..
T Consensus 158 ~~p~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~ 236 (397)
T 2ord_A 158 FEPLVPGFEYFEFNNVEDLRRKMSE-DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLF 236 (397)
T ss_dssp GCSCCTTEEEECTTCHHHHHHHCCT-TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS
T ss_pred cCCCCCCeeEecCCCHHHHHHHhhc-CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccch
Confidence 11666777899999999987 5999999999999999 4 4588999999999999999999863211 11
Q ss_pred ---ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--HHHHHHHHHH
Q 009167 343 ---ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTA 417 (541)
Q Consensus 343 ---~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~~a 417 (541)
......|++ |++|+++++ ...|+++++++++ .++..........++..++.+...++.+. ...++..+++
T Consensus 237 ~~~~~~~~~d~~--s~sK~~~~G--~r~G~~~~~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 311 (397)
T 2ord_A 237 AYQKYGVVPDVL--TTAKGLGGG--VPIGAVIVNERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKG 311 (397)
T ss_dssp HHHHHTCCCSEE--EECGGGGTT--SCCEEEEECSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHH
T ss_pred hhhhhCCCCCee--eeccccCCC--cCeEEEEEchHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 112236876 678999853 3467888887765 54322222223346666666666665543 2344555666
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCcc
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~ 497 (541)
+.+.+.|++.+. .+|.+ ....+.|++++|++++. ....++.+.|...++.+..|
T Consensus 312 ~~l~~~L~~~~~----~~~~~----------~~~~~~g~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~~----------- 365 (397)
T 2ord_A 312 NYLMKKLQEMKE----EYDVV----------ADVRGMGLMIGIQFREE-VSNREVATKCFENKLLVVPA----------- 365 (397)
T ss_dssp HHHHHHHHHHHH----HCTTE----------EEEEEETTEEEEEECTT-SCHHHHHHHHHHTTEECEEE-----------
T ss_pred HHHHHHHHHHHH----hCCce----------EEEEEEeEEEEEEECCh-HHHHHHHHHHHHCCCEEccC-----------
Confidence 777777765310 01110 00122578999999742 12455666665556655432
Q ss_pred ccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhhC
Q 009167 498 MSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHAI 541 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~~i 541 (541)
.++.+||+++. ++.+++++.|.+++++|
T Consensus 366 ----------------~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 397 (397)
T 2ord_A 366 ----------------GNNTIRFLPPLTVEYGEIDLAVETLKKVLQGI 397 (397)
T ss_dssp ----------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred ----------------CCCEEEEECCcCCCHHHHHHHHHHHHHHHhhC
Confidence 14689999654 34455666677766654
No 147
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.90 E-value=1.4e-21 Score=212.42 Aligned_cols=215 Identities=13% Similarity=0.150 Sum_probs=150.7
Q ss_pred HHHHHHHHHHHh----C-C----CcEEEeCCHHHHHHHHHHHhccCCC----EEEEcCCCCcchHHHHHhhcccCCeEEE
Q 009167 212 TVVVEEKMSALE----G-A----ESTVIMASGMSASTVMLLALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITAT 278 (541)
Q Consensus 212 ~~~Le~~LA~l~----g-~----e~~i~~sSGs~Ai~~al~all~pGd----~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~ 278 (541)
...+|+.||+++ | . +++++++++++|+.+++.+++.+|| +|+++.|.|+..... +...|.++.
T Consensus 131 ~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~----~~~~g~~~v 206 (498)
T 3ihj_A 131 VNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAV----ISELDAIQV 206 (498)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHH----HHHTTCEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHH----HHHcCCEEE
Confidence 345555555554 3 2 4677777778999999999999875 999999999976543 344577777
Q ss_pred EeCCC-------CHHHHHHhccCC----CceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCccc--
Q 009167 279 VIDPA-------DMEGLEAALNNN----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-- 342 (541)
Q Consensus 279 ~vd~~-------d~e~Le~al~~~----~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~-- 342 (541)
.++.+ |+++|++++++. ++++|++++|+||||.+++ +++|+++|+++|++||+||+|.......
T Consensus 207 ~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~ 286 (498)
T 3ihj_A 207 NYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDC 286 (498)
T ss_dssp EEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTC
T ss_pred EeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCC
Confidence 66543 899999998752 3899999999999999987 5579999999999999999987643321
Q ss_pred ---cc-c----cC-------CcEEEECCccccCCCCCceEEEEE---eChHHHHHHHHHhhhcCCCchHHHHHHHHHh--
Q 009167 343 ---AL-S----LG-------ADLVLHSATKFIGGHNDVLAGSIS---GSGKLVTQIRNLHHVLGGALNPNAAYLIIRG-- 402 (541)
Q Consensus 343 ---~~-~----~g-------aDivv~S~sK~lgg~gd~~gG~lv---~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~-- 402 (541)
++ . .+ ..++++|+||.+.|..+..+||++ +++++++.+........ ..+.....++...
T Consensus 287 ~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~q~a~~~~l~ 365 (498)
T 3ihj_A 287 RFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRL-CPPVSGQAAMDIVVN 365 (498)
T ss_dssp CCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHTC
T ss_pred CcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccC-CCCHHHHHHHHHHhc
Confidence 11 0 11 137889999999532234688887 68889888877655332 2233333222222
Q ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHhCCCce
Q 009167 403 ------------MKTLHLRVQQQNSTALRMAKILEAHPKVK 431 (541)
Q Consensus 403 ------------l~tl~~r~~~~~~~a~~la~~L~~~p~v~ 431 (541)
++.+....++..++++.+.+.|+++|++.
T Consensus 366 ~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~ 406 (498)
T 3ihj_A 366 PPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIH 406 (498)
T ss_dssp CCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred CCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 23334445666788888999998877653
No 148
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.90 E-value=2.8e-22 Score=209.94 Aligned_cols=291 Identities=16% Similarity=0.086 Sum_probs=192.4
Q ss_pred CchhHHHHH----HHHHHHhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe--EEEEe
Q 009167 208 GNPTTVVVE----EKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVI 280 (541)
Q Consensus 208 ~~p~~~~Le----~~LA~l~g~e~~-i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi--~v~~v 280 (541)
+.+..+.++ +++++++|.+.. +++++|++|+.+++.+++++||+|+++.++|+++.... ..+...|. ....+
T Consensus 63 g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 141 (407)
T 2dkj_A 63 GCEVIDRVESLAIERAKALFGAAWANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHG-SRVNFSGKLYKVVSY 141 (407)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGT-CTTSHHHHHSEEEEE
T ss_pred CchHHHHHHHHHHHHHHHHhCCCcceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchH-HHHHhcCceEEEEec
Confidence 455444444 499999998755 77899999999999999999999999999998753111 11222233 33334
Q ss_pred C------CCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-----ccccccCCc
Q 009167 281 D------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGAD 349 (541)
Q Consensus 281 d------~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-----~~~~~~gaD 349 (541)
+ ..|+++|++++++.++++|++++|+|| .+.|+++|.++|+++|+++|+|++|+.++. ..+.. ..|
T Consensus 142 ~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~d 218 (407)
T 2dkj_A 142 GVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAH 218 (407)
T ss_dssp CCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCS
T ss_pred CCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc-ccc
Confidence 2 247999999987424899999999997 678999999999999999999999875221 11122 379
Q ss_pred EEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcC-CCchHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHH
Q 009167 350 LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-GALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAK 422 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G-~~~s~~~a~l~l~~l-----~tl~~r~~~~~~~a~~la~ 422 (541)
+++.|+||+++|+. +|+++++ +++++.++.....+. +..++.....+...+ +.+....++..++++++.+
T Consensus 219 i~~~s~sK~l~g~~---~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 295 (407)
T 2dkj_A 219 VVTSTTHKTLRGPR---GGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAE 295 (407)
T ss_dssp EEEEESSGGGCCCS---CEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccCCCCC---ceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999999987653 6999998 788888876543222 223332222222222 2334556667778888888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccC
Q 009167 423 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 423 ~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
.|++. ++. +..+ .+.|+++++.++........+.+.|...++.+..|.... |..
T Consensus 296 ~L~~~-g~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~---------~~~ 349 (407)
T 2dkj_A 296 ELARR-GYR-IVTG---------------GTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPF---------DPK 349 (407)
T ss_dssp HHHHT-TCE-EGGG---------------SCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTT---------CSS
T ss_pred HHHhC-Cce-eecC---------------CCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCcc---------ccc
Confidence 88876 332 2111 124778999987311123456666666677777664310 000
Q ss_pred CCHHHHHhcCCCCCeEEEEec--------CCCHHHHHHHHHHHHh
Q 009167 503 LSQSERLKYGIMDNLVRFSFG--------VEDFEDLKADVLQALH 539 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG--------~e~~edli~dL~~AL~ 539 (541)
. ...++.+|+|++ .++.+.+++.|.++++
T Consensus 350 -~-------~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~ 386 (407)
T 2dkj_A 350 -P-------PRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALL 386 (407)
T ss_dssp -C-------TTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHH
T ss_pred -c-------ccCCCceeeecccccccCCCHHHHHHHHHHHHHHHh
Confidence 0 012468999984 3566777777777665
No 149
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.90 E-value=4.2e-22 Score=204.41 Aligned_cols=286 Identities=13% Similarity=0.064 Sum_probs=190.7
Q ss_pred CCccCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEE
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~ 278 (541)
.|.+++...+..+++++.+++++|.+ .++++++|++|+.+++..++++||+|+++.++|++.... ..++..|.++.
T Consensus 40 ~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~--~~~~~~g~~~~ 117 (359)
T 1svv_A 40 TQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEAVIATQLGHISTHET--GAIEATGHKVV 117 (359)
T ss_dssp CCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEETTSHHHHSST--THHHHTTCCEE
T ss_pred hccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhCCCCEEEEcccchHHHHHH--HHHhcCCCeeE
Confidence 35556667788999999999999874 467778888999999999999999999999999886431 02345688888
Q ss_pred EeCCC----CHHHHHHhccCC------CceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCC---CCC---C
Q 009167 279 VIDPA----DMEGLEAALNNN------NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTF---ATP---L 339 (541)
Q Consensus 279 ~vd~~----d~e~Le~al~~~------~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~---a~~---~ 339 (541)
.++.+ |+++|+++++++ ++++|++++| ||||.++| +++|.++|+++|+++|+|+++ ..+ .
T Consensus 118 ~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 196 (359)
T 1svv_A 118 TAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN 196 (359)
T ss_dssp EECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC
T ss_pred EEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc
Confidence 88754 589999998753 2899999999 79999998 889999999999999999998 311 1
Q ss_pred ccccc--ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc--hHHHHHHHHHhHH--HHHHHHHHH
Q 009167 340 NQKAL--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMK--TLHLRVQQQ 413 (541)
Q Consensus 340 ~~~~~--~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~--s~~~a~l~l~~l~--tl~~r~~~~ 413 (541)
..+.. ..+.|+++.|++|+.++.+ .|+++.++++++.++......+... +......+...++ .+....++.
T Consensus 197 ~~~~~~~~~~~d~~~~s~~K~g~~~~---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 273 (359)
T 1svv_A 197 DLTLADIARLTDMFYIGATKAGGMFG---EALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHS 273 (359)
T ss_dssp CCCHHHHHHHCSEEEEECTTTTCSSC---EEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHH
T ss_pred chhhhhhhhcCCEEEEecccCCCCCc---eEEEEEcccHHHHHHHHHhcCCcccccchhhHHHHHHHHhhhhHHHHHHHH
Confidence 11211 1357999999999854433 5888888888777665432222211 1111111111222 233445556
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCc-CeecccCCccccc
Q 009167 414 NSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIV 492 (541)
Q Consensus 414 ~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~-~iavS~G~~~sl~ 492 (541)
.++++.+.+.| +.+++. +..|. .++++++.++ .++.+.|... ++.+ +|..
T Consensus 274 ~~~~~~l~~~L-~~~~~~-~~~~~----------------~~~~~~~~~~------~~~~~~l~~~~gi~v-~~~~---- 324 (359)
T 1svv_A 274 NKMAAILKAGL-EACGIR-LAWPS----------------ASNQLFPILE------NTMIAELNNDFDMYT-VEPL---- 324 (359)
T ss_dssp HHHHHHHHHHH-HHTTCC-BSSCC----------------SSSEECBEEE------HHHHHHHTTTEECEE-EEEE----
T ss_pred HHHHHHHHHHh-ccCCeE-EccCC----------------ccceEEEEcC------HHHHHHHHHhcCEEE-Eecc----
Confidence 67777888888 444432 11121 3567777775 2455666544 5554 1100
Q ss_pred ccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+ ..++.|||+++...+++.++.+.++|++
T Consensus 325 --~-----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 353 (359)
T 1svv_A 325 --K-----------------DGTCIMRLCTSWATEEKECHRFVEVLKR 353 (359)
T ss_dssp --T-----------------TTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred --c-----------------CCCceEEEEccCcCCHHHHHHHHHHHHH
Confidence 0 1246899999876655556666555543
No 150
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.89 E-value=1.8e-21 Score=208.03 Aligned_cols=288 Identities=15% Similarity=0.095 Sum_probs=191.1
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc---------cCC-CEEEEcCCCCcchHHHHHhhcc-----
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PAG-GHIVTTTDCYRKTRIFIETVLP----- 271 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all---------~pG-d~Vlv~~~~y~~~~~~~~~~l~----- 271 (541)
+.++...+++++|++++|.+.+++++||++|+.+++..+. .+| |+||+.++.|++..........
T Consensus 115 ~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~ 194 (439)
T 2oat_A 115 FYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSY 194 (439)
T ss_dssp SEESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcc
Confidence 5678899999999999998888999999999999998764 357 8999999999875322211111
Q ss_pred ----cCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccc----cHHHHHHHHHhCCCEEEEeCCCCCCCc---
Q 009167 272 ----KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (541)
Q Consensus 272 ----~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~----dl~~Ia~la~~~gi~lIvDea~a~~~~--- 340 (541)
....++..++..|+++|+++++..++++|++|..+|++|.+. ++++|.++|++||++||+||++.....
T Consensus 195 ~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~ 274 (439)
T 2oat_A 195 DGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR 274 (439)
T ss_dssp TTSCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred cCCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCc
Confidence 111356667778999999999533589999987778899877 699999999999999999999853211
Q ss_pred ---ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHHH--HHHHHHH
Q 009167 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNS 415 (541)
Q Consensus 341 ---~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~~--r~~~~~~ 415 (541)
.+......|++ |++|.++++ ...+|++++++++++.+...........++..+..+...++.+.. ..++..+
T Consensus 275 ~~~~~~~~~~~Di~--t~sK~l~~G-~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 351 (439)
T 2oat_A 275 WLAVDYENVRPDIV--LLGKALSGG-LYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADK 351 (439)
T ss_dssp SSGGGGGTCCCSEE--EECGGGGTT-SSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred chhHHHhCCCCcEE--EecccccCC-CCCeEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 12223356876 788999863 135799999988877665422212223456666666666665432 3445556
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-HHHHHHHHHccCcCeecccCCccccccc
Q 009167 416 TALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQ 494 (541)
Q Consensus 416 ~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-~~~~~~l~~L~~~~iavS~G~~~sl~~~ 494 (541)
+.+++.+.|++.. +|.. ...++.|.+++++++... ....++.+.|...|+.+..+
T Consensus 352 ~~~~l~~~L~~l~------~~~~----------~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~-------- 407 (439)
T 2oat_A 352 LGIILRNELMKLP------SDVV----------TAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPT-------- 407 (439)
T ss_dssp HHHHHHHHHTTSC------TTTE----------EEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECCBS--------
T ss_pred HHHHHHHHHHHhc------CCCc----------EEEEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEecC--------
Confidence 6666667666531 1110 012346889999997430 12345666665556554421
Q ss_pred CccccccCCCHHHHHhcCCCCCeEEEEecCCCH----HHHHHHHHHHHhh
Q 009167 495 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF----EDLKADVLQALHA 540 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~----edli~dL~~AL~~ 540 (541)
.++.|||+++...+ +.+++.|.+++++
T Consensus 408 -------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 408 -------------------HGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp -------------------SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred -------------------CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 14689998875444 4445555555543
No 151
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.89 E-value=6.7e-22 Score=209.68 Aligned_cols=268 Identities=10% Similarity=0.061 Sum_probs=173.2
Q ss_pred hhHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCC---------
Q 009167 210 PTTVVVEEKMSALE----GA--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--------- 274 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~G--------- 274 (541)
....+|+++||+++ +. ++.++++++++++.+ +..++++||+|+++.|+|++....+.. ....+
T Consensus 98 ~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~ 175 (432)
T 3ei9_A 98 QGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVI-MGQTGQFNTDVQKY 175 (432)
T ss_dssp TCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH-HHHHHCTTCCEEEEESCCTHHHHHHHH-HTCSCCEETTTTEE
T ss_pred CCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHHHHHH-cCCccccccccccc
Confidence 45678999999986 44 345555566688876 578889999999999999997665533 22222
Q ss_pred eEEEEeCCCCH----HHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----cc
Q 009167 275 ITATVIDPADM----EGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KA 343 (541)
Q Consensus 275 i~v~~vd~~d~----e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~----~~ 343 (541)
.++.+++.++. .++++ .+ ++++|++++|+||||.+++ +++|+++|++||++||+||+|+..... ..
T Consensus 176 ~~~~~~~~~~~~~~~~~l~~--~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~ 252 (432)
T 3ei9_A 176 GNIEYMRCTPENGFFPDLST--VG-RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSI 252 (432)
T ss_dssp TTCEEEECCGGGTTSCCGGG--CC-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSG
T ss_pred CceEEeccCcccCCcCChhh--CC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCCh
Confidence 13444443211 12222 23 5899999999999999997 557777799999999999998753211 11
Q ss_pred c----ccCCcEEEECCccccCCCCCceEEEEEeChHH--------HHHHHHHhhhcCCCchHHHHHHHHHh-----HHHH
Q 009167 344 L----SLGADLVLHSATKFIGGHNDVLAGSISGSGKL--------VTQIRNLHHVLGGALNPNAAYLIIRG-----MKTL 406 (541)
Q Consensus 344 ~----~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~l--------i~~l~~~~~~~G~~~s~~~a~l~l~~-----l~tl 406 (541)
. ..+.++++.|+||.+|..| ...|++++++++ ++.+...........++.....+... .+.+
T Consensus 253 ~~~~~~~~~~i~~~S~SK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 331 (432)
T 3ei9_A 253 FEIPGAEEVAMETASFSNYAGFTG-VRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAM 331 (432)
T ss_dssp GGSTTGGGTEEEEEESHHHHCTTT-TCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHH
T ss_pred hhcCCCCCeEEEEecchhccCCcc-cceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHH
Confidence 1 1245799999999998555 357899988877 67666554433333444443333322 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeeccc
Q 009167 407 HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSF 485 (541)
Q Consensus 407 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~ 485 (541)
....++..++++.+.+.|+++ ++... .| ..|.++++.+++. ....+.+.| +..++.+..
T Consensus 332 ~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~----------------~~~~~~~~~~~~~--~~~~~~~~ll~~~gv~v~~ 391 (432)
T 3ei9_A 332 HKVIGFYKENTNIIIDTFTSL-GYDVY-GG----------------KNAPYVWVHFPNQ--SSWDVFAEILEKTHVVTTP 391 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCEE-EC----------------SSSSEEEEECTTS--CHHHHHHHHHHHHCEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHHC-Cceec-CC----------------CcceEEEEECCCC--CHHHHHHHHHHHCCEEEeC
Confidence 556666778888888999876 33221 11 1356889999742 223344433 234777777
Q ss_pred CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009167 486 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 486 G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
|..+.. ..++.||||++.
T Consensus 392 g~~f~~---------------------~~~~~iRis~~~ 409 (432)
T 3ei9_A 392 GSGFGP---------------------GGEGFVRVSAFG 409 (432)
T ss_dssp GGGGCG---------------------GGTTEEEEECCS
T ss_pred chHhCC---------------------CCCCEEEEEecC
Confidence 654321 025799999965
No 152
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.89 E-value=8.1e-22 Score=213.29 Aligned_cols=277 Identities=12% Similarity=0.079 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhcc-----CC---CEEEEcCCCCcchHHHHHhhcccCCeEEEE
Q 009167 212 TVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP-----AG---GHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 212 ~~~Le~~LA~l~g~e----~~i~~sSGs~Ai~~al~all~-----pG---d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
.+++++.+++++|.+ ..+++++|++|+.++++++.+ +| |+|+++.+.|.++... +...|++++.
T Consensus 109 ~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~----~~~~G~~~~~ 184 (497)
T 3mc6_A 109 ESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKA----AYYFGMKLRH 184 (497)
T ss_dssp HHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHH----HHHSCCEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHH----HHHcCCeEEE
Confidence 345666788888875 578888888999999998865 56 8999999999886543 3445888888
Q ss_pred eCCC------CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-------------c
Q 009167 280 IDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-------------N 340 (541)
Q Consensus 280 vd~~------d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-------------~ 340 (541)
++.+ |+++|++++++ ++++|++++|+||+|.+.|+++|.++|+++|++||+|++|+.+. .
T Consensus 185 v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~ 263 (497)
T 3mc6_A 185 VELDPTTYQVDLGKVKKFINK-NTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPL 263 (497)
T ss_dssp ECBCTTTCSBCTTTTGGGCCS-SEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCC
T ss_pred EecCcccCcCCHHHHHHHHhh-CCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCcc
Confidence 7643 58999999987 49999999999999999999999999999999999999987321 1
Q ss_pred ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCC----------Cch--HHHHHHHHHhHH--
Q 009167 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGG----------ALN--PNAAYLIIRGMK-- 404 (541)
Q Consensus 341 ~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~----------~~s--~~~a~l~l~~l~-- 404 (541)
.+....|+|+++.|++|+++++. ..|+++.+++.+....... ...++ ... ...++.+++.+.
T Consensus 264 ~~~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~ 341 (497)
T 3mc6_A 264 LDFRVPGVTSISCDTHKYGFAPK--GSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGEN 341 (497)
T ss_dssp CSTTSTTCCEEEEETTTTTCCCS--SCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcEEEECchhhcCCCC--CceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHH
Confidence 33345689999999999975443 2577777665544321100 00111 111 233455554443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeec
Q 009167 405 TLHLRVQQQNSTALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 483 (541)
Q Consensus 405 tl~~r~~~~~~~a~~la~~L~~-~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iav 483 (541)
.+..+.++..++++++.+.|++ .|++..+..| .++++.|..++ .....+.+.|...++.+
T Consensus 342 ~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~-----------------~~~~v~~~~~~--~~~~~l~~~L~~~Gi~v 402 (497)
T 3mc6_A 342 GYIESCQEIVGAAMKFKKYIQENIPDLDIMGNP-----------------RYSVISFSSKT--LNIHELSDRLSKKGWHF 402 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCC-----------------CSSEEEEECTT--TTHHHHHHHHHTTTCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-----------------CeeEEEEeCCC--CCHHHHHHHHHhCCEEE
Confidence 3455677778899999999998 4776433222 35688887754 23556677776666544
Q ss_pred ccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec---CCCHHHHHHHHHHHHhh
Q 009167 484 SFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG---VEDFEDLKADVLQALHA 540 (541)
Q Consensus 484 S~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG---~e~~edli~dL~~AL~~ 540 (541)
+.+. .+..+|+++. .++.++++++|.+++++
T Consensus 403 ~~~~--------------------------~~~~~ri~~~~~t~e~i~~~~~~L~~~l~~ 436 (497)
T 3mc6_A 403 NALQ--------------------------KPVALHMAFTRLSAHVVDEICDILRTTVQE 436 (497)
T ss_dssp EECC--------------------------SSCCEEEECCTTTTCTHHHHHHHHHHHHHH
T ss_pred ecCC--------------------------CCCeEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 3221 1234677775 46788888888888764
No 153
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.89 E-value=1.1e-21 Score=208.04 Aligned_cols=285 Identities=14% Similarity=0.137 Sum_probs=190.0
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHhhcc------
Q 009167 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP------ 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~-------pG-d~Vlv~~~~y~~~~~~~~~~l~------ 271 (541)
.|.++..++|+++|++++|.+.+++++||++|+.++++.+.. +| ++||+.++.|++..........
T Consensus 95 ~~~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~ 174 (420)
T 2pb2_A 95 VFTNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSD 174 (420)
T ss_dssp TSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHT
T ss_pred ccCCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccc
Confidence 467789999999999999988899999999999999998765 77 4999999999875322211111
Q ss_pred ---cCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCcc----ccHHHHHHHHHhCCCEEEEeCCCCCCCc----
Q 009167 272 ---KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC----VDVKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (541)
Q Consensus 272 ---~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i----~dl~~Ia~la~~~gi~lIvDea~a~~~~---- 340 (541)
.....+..++..|+++|++++++ ++++|++|+++|++|.+ .++++|.++|++||++||+||+|.....
T Consensus 175 ~~~p~~~~~~~~~~~d~~~le~~i~~-~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~ 253 (420)
T 2pb2_A 175 GFGPKPADIIHVPFNDLHAVKAVMDD-HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDL 253 (420)
T ss_dssp TSSSCCSCEEEECTTCHHHHHHHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred cCCCCCCCeEEecCCCHHHHHHHhcc-CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcH
Confidence 11123666777799999999987 59999999999988862 3588999999999999999999853211
Q ss_pred --ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHHH--HHHHHHHHH
Q 009167 341 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 416 (541)
Q Consensus 341 --~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~~ 416 (541)
........|++ |++|.+++ | ...|++++++++++.++..........++..++.+...++.+. ...++..++
T Consensus 254 ~~~~~~~~~~dii--t~sK~l~~-G-~~iG~~~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~ 329 (420)
T 2pb2_A 254 FAYMHYGVTPDIL--TSAKALGG-G-FPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTK 329 (420)
T ss_dssp SHHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHH
T ss_pred HHHHhcCCCCCeE--EecccccC-C-CceEEEEEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 12233457877 57899985 3 3568888888877665442111112345666666666665542 334455566
Q ss_pred HHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH-HHHHHHHHHccCcCeecccCCcccc
Q 009167 417 ALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 417 a~~la~~L~~~----p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~-~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
.+++.+.|++. |.+.. .++.|++++|+++... ....++.+.|...++.+..|
T Consensus 330 ~~~l~~~L~~~~~~~~~~~~------------------~~~~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~----- 386 (420)
T 2pb2_A 330 RQQFVQHLQAIDEQFDIFSD------------------IRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNA----- 386 (420)
T ss_dssp HHHHHHHHHHHHHHHCCEEE------------------EEEETTEEEEEECGGGTTCHHHHHHHHHHTTEECEES-----
T ss_pred HHHHHHHHHHHHhcCCCeEE------------------EEecceEEEEEECCCchHHHHHHHHHHHHCCCEEEeC-----
Confidence 66676666543 22211 1235789999996421 12456677665556655432
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHhh
Q 009167 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALHA 540 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e----~~edli~dL~~AL~~ 540 (541)
.++.|||++... +.+++++.|.+++++
T Consensus 387 ----------------------~~~~iRl~~~~~~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 387 ----------------------GADVMRFAPSLVVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp ----------------------STTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 146899996643 445555566655543
No 154
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.89 E-value=7e-21 Score=199.89 Aligned_cols=303 Identities=13% Similarity=0.085 Sum_probs=206.2
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-----
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~al-l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----- 282 (541)
.+...++|++||+++|.++++++++|++|+.+++.++ +++||+|+++.++|+++...+. ..|.++.+++.
T Consensus 31 g~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~v~~~~~~~ 106 (394)
T 1o69_A 31 GEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPIC----YLKAKPVFIDCDETYN 106 (394)
T ss_dssp THHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHH----HTTCEEEEECBCTTSS
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHH----HcCCEEEEEEeCCCCC
Confidence 4678999999999999988999999999999999999 9999999999999999765443 35888888874
Q ss_pred CCHHHHHHhccCC--CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccccc---c-cCCcEEEECCc
Q 009167 283 ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL---S-LGADLVLHSAT 356 (541)
Q Consensus 283 ~d~e~Le~al~~~--~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~---~-~gaDivv~S~s 356 (541)
.|+++|++++++. ++++|++++ |+|...++++|.++|+++|++||+|++|+.+...... . .++|+..+|.+
T Consensus 107 ~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~ 183 (394)
T 1o69_A 107 IDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGN 183 (394)
T ss_dssp BCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred cCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCC
Confidence 3789999988752 489999964 8899999999999999999999999999854322111 1 23566677779
Q ss_pred cccCCCCCceEEEEEeC-hHHHHHHHHHhhhcC-------C-------CchHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 009167 357 KFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLG-------G-------ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMA 421 (541)
Q Consensus 357 K~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~G-------~-------~~s~~~a~l~l~~l~tl~~r~~~~~~~a~~la 421 (541)
|.++|.+ +|+++++ +++++.++....... . .+++..+.+++..++.+..++++..++++++.
T Consensus 184 K~l~~~~---~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~ 260 (394)
T 1o69_A 184 KIITTSG---GGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYK 260 (394)
T ss_dssp SSSCCSS---CEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred ccCCCCC---ceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998654 7899985 788888876532110 0 03455555555556667777788888889999
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH--------------------HHHHHHHHHccCcCe
Q 009167 422 KILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--------------------TATIKFIDALKIPYI 481 (541)
Q Consensus 422 ~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~--------------------~~~~~~l~~L~~~~i 481 (541)
+.|++. + .+ ++.. ... .....+++|.++.+. .....+.+.|...++
T Consensus 261 ~~L~~~--~-~~-~~~~-~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI 326 (394)
T 1o69_A 261 EFLGEY--F-SF-LDEL-ENS---------RSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQI 326 (394)
T ss_dssp HHHTTT--E-EC-CCCC-TTE---------ECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTC
T ss_pred HHhccc--c-cc-cCCC-CCC---------cceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCC
Confidence 988765 2 22 2211 000 001125777776321 245677777777788
Q ss_pred ecccCCcccccccCccccc--cCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 482 APSFGGCESIVDQPAIMSY--WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 482 avS~G~~~sl~~~pa~~~~--~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.++.|... +.+.|..... ..++-.... ....+|+..+...+++.++.+.++|++
T Consensus 327 ~v~~~~~~-~~~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~t~edi~~~~~~l~~ 382 (394)
T 1o69_A 327 ETRPLWKA-MHTQEVFKGAKAYLNGNSELF----FQKGICLPSGTAMSKDDVYEISKLILK 382 (394)
T ss_dssp CCBCCCCC-GGGCGGGTTCEEEECSHHHHH----HHHEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred cccccCCc-cccchhhhccCCCCChHHHHH----hcCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 88877432 1112211100 001111111 123566666777777777777777764
No 155
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.89 E-value=7.5e-22 Score=206.34 Aligned_cols=291 Identities=14% Similarity=0.135 Sum_probs=189.7
Q ss_pred chhHHHHHHHHHHHhCCCcEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCC--eEEEEeC----
Q 009167 209 NPTTVVVEEKMSALEGAESTVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVID---- 281 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~-sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~G--i~v~~vd---- 281 (541)
....+++++.+++++|.++.+++ +||++|+++++.. +.+||+|++..+.|++.. +...+...| .++.+++
T Consensus 34 ~~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~~-~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~ 110 (379)
T 3ke3_A 34 QEVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVARQ-LTIDEDCLIIRNGWFSYR--WTQILEKGKFAKSSTVLTAERT 110 (379)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHH-HCTTCEEEEEECSHHHHH--HHHHHHHHCCSSEEEEEECEES
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHHh-CCCCCeEEEEeCCchhHH--HHHHHHHhCCCCceEEEecccc
Confidence 35778899999999998765554 6889999998754 579999999999998743 222333334 3555543
Q ss_pred ----------CCCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcccccccCC
Q 009167 282 ----------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA 348 (541)
Q Consensus 282 ----------~~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~ga 348 (541)
..|++++++++++.++++|++.+++|++|.+.| +++|.++|+++|+++|+|++++.....+...+++
T Consensus 111 g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~g~~~~~~~~~~~ 190 (379)
T 3ke3_A 111 EDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIASGCVWLDMKELGI 190 (379)
T ss_dssp SCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTCTTCCCCHHHHTC
T ss_pred ccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEecccCCccccccccCC
Confidence 358999999995324899999999999999999 9999999999999999999987323344455689
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-------------------h---hcCCCchHHHHHHHHHhHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------------------H---VLGGALNPNAAYLIIRGMKTL 406 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-------------------~---~~G~~~s~~~a~l~l~~l~tl 406 (541)
|+++.|++|+++++. .+|++++++++++.+.... . .+..+.++...+.+..+++.+
T Consensus 191 d~~~~s~~K~l~~~~--g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~ 268 (379)
T 3ke3_A 191 DVLISAPQKGWSSTP--CAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEA 268 (379)
T ss_dssp SEEEECTTTTTCSCC--CEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHH
T ss_pred CEEEecchhhcCCCC--ceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 999999999998764 2689999998887775310 0 011244444444333444432
Q ss_pred -----HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCe
Q 009167 407 -----HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI 481 (541)
Q Consensus 407 -----~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~i 481 (541)
..+.++..++++++.+.|++.. +. +..+. .+ ..+.+..+.+++ .. . .+...|...++
T Consensus 269 ~~~g~~~~~~~~~~l~~~l~~~l~~~g-~~-~~~~~-----~~--------~~~~i~~~~~~~-~~-~-~~~~~L~~~Gi 330 (379)
T 3ke3_A 269 KEIGFDILRDAQWELGNRVRKVLTDKG-IE-SVAAE-----GF--------EAPGVVVSYTER-DD-M-HKGSAFAEAGL 330 (379)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHTT-CC-BSBCT-----TC--------BCSSEEEEECSC-HH-H-HSSHHHHHTTC
T ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHcC-CE-ecCCc-----cc--------cCceEEEEccCC-cc-h-HHHHHHHHCCe
Confidence 3444555567777778887752 21 11110 00 123355555543 22 2 12344444577
Q ss_pred ecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009167 482 APSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 482 avS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~dL~~AL~~ 540 (541)
.++.|..++. ..| ...+.||||+.. ++.+.+++.|++++++
T Consensus 331 ~v~~g~~~~~-~~~-----------------~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~ 375 (379)
T 3ke3_A 331 QIAAGVPLKV-GEP-----------------DNFKTFRLGLFGLDKLTDIDGTVERFEKALDE 375 (379)
T ss_dssp CCEECCCCSS-CCC-----------------TTCCEEEEECCSHHHHTCHHHHHHHHHHHHHH
T ss_pred EEeCCccccc-ccc-----------------CcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHH
Confidence 6666643211 000 125789999875 5666666666666654
No 156
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.89 E-value=8.8e-22 Score=207.04 Aligned_cols=282 Identities=12% Similarity=0.111 Sum_probs=175.5
Q ss_pred HHHHHHHHHHhC-------CCcEEEeCCHH-HHHHHHHHHhccCCC----EEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 213 VVVEEKMSALEG-------AESTVIMASGM-SASTVMLLALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 213 ~~Le~~LA~l~g-------~e~~i~~sSGs-~Ai~~al~all~pGd----~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.+||++||++++ .++.|++++|+ +++.+++.+++++|| +|+++.|+|.+....+ +..|.++..+
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~----~~~g~~~~~~ 146 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEET----TYVRSGMYKW 146 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHH----HTTCBTTEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHH----HHcCCeEEEe
Confidence 789999999987 23456666665 999999999999999 9999999999866444 3345554444
Q ss_pred CCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCccccc--ccCCcEEEECCccc
Q 009167 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKAL--SLGADLVLHSATKF 358 (541)
Q Consensus 281 d~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~--~~gaDivv~S~sK~ 358 (541)
+.+ .+.++ .+ ++++|++++||||||.+++ +|++.++.++++||+|++|.... ..++ ..+.++++.|+||.
T Consensus 147 ~~d-~~~l~---~~-~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~-~~~l~~~~~~~i~~~S~SK~ 218 (391)
T 3bwn_A 147 EGD-AWGFD---KK-GPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPH-YTPITRRQDHDIMLFTFSKI 218 (391)
T ss_dssp EEE-STTCC---CC-SCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTT-TSCCCCCBCCSEEEEEHHHH
T ss_pred cCC-HHHcC---CC-CCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCC-CCccccCCCCeEEEEechhh
Confidence 321 22222 23 5899999999999999996 45442233349999999987421 1111 34678999999999
Q ss_pred cCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHH--------------HHHHHHHHHHHHHHHHHH
Q 009167 359 IGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT--------------LHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 359 lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~t--------------l~~r~~~~~~~a~~la~~ 423 (541)
+|.+| ...|++++ ++++++.+...........+...+.++...++. +....+...++++.+.+.
T Consensus 219 ~g~~G-lRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 297 (391)
T 3bwn_A 219 TGHAG-SRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREV 297 (391)
T ss_dssp HSCGG-GCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCc-cceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 98666 34688886 889988888766543344455544444444432 333344455677888888
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCC
Q 009167 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 503 (541)
Q Consensus 424 L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~ 503 (541)
|+++|.+. +..|. .+..+ .........|.++|+.++.. + .+...|+..++.+..|..+.
T Consensus 298 L~~~~~~~-~~~p~-~~~~~--f~~~~~~~~g~~~~~~~~~~-~---~~~~~l~~~gV~v~pg~~fg------------- 356 (391)
T 3bwn_A 298 VKESDAFT-LPKYP-EAFCN--YFGKSLESYPAFAWLGTKEE-T---DLVSELRRHKVMSRAGERCG------------- 356 (391)
T ss_dssp HHTCSSEE-CCCCC-CEEET--TTTEEECCCCSEEEEEESSS-C---CHHHHHHHTTEECEEGGGGT-------------
T ss_pred HHhCCCcc-cccCC-ccccc--cccccCCCcceEEEecCCcH-H---HHHHHHHHCCEEEccCCCCC-------------
Confidence 98876432 22121 00000 00000112455789999742 2 22333444577777775431
Q ss_pred CHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 504 SQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 504 ~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
..+++||||++. + ++.++.+.++|.
T Consensus 357 ---------~~~~~iRis~~~-~-~e~i~~~~~~L~ 381 (391)
T 3bwn_A 357 ---------SDKKHVRVSMLS-R-EDVFNVFLERLA 381 (391)
T ss_dssp ---------CCTTEEEEESCS-C-HHHHHHHHHHHH
T ss_pred ---------CCCCEEEEEecC-C-HHHHHHHHHHHH
Confidence 135789999995 3 333444444443
No 157
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.88 E-value=9.2e-22 Score=203.42 Aligned_cols=275 Identities=12% Similarity=0.033 Sum_probs=179.4
Q ss_pred hHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC---
Q 009167 211 TTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e---~~i~~-sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
..+++++++++++|.+ +++++ ++|++|+.+++.+++++||+|++..+.|.+.. +...++..| ++++++..
T Consensus 50 ~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g-~~~~v~~~~~~ 126 (362)
T 2c0r_A 50 VHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASK--ALKEAKLIG-DTHVAASSEAS 126 (362)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHHS-CEEEEEECGGG
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHH--HHHHHHHhC-CeEEEeccccc
Confidence 5778999999999985 44566 45679999999999999999988876654432 112344456 66655421
Q ss_pred ------CHHHHHHhccCCCceEEEEeCCCCCCCcc-ccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCc
Q 009167 284 ------DMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSAT 356 (541)
Q Consensus 284 ------d~e~Le~al~~~~tklV~lesP~NPtG~i-~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~s 356 (541)
|+++++ +++ +|++|++++|+||||.+ .|+++| +|+++|+|++|+.+...-.+. ..|+++.|+|
T Consensus 127 ~~~~~~~~~~~~--i~~-~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~-~~d~~~~s~~ 196 (362)
T 2c0r_A 127 NYMTLPKLQEIQ--LQD-NAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLN-QFGLVYAGAQ 196 (362)
T ss_dssp TTCSCCCGGGCC--CCT-TEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCGG-GCSEEEEETT
T ss_pred ccccCCCHHHcc--cCC-CcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCccchh-HCcEEEEecc
Confidence 333332 565 59999999999999996 678776 899999999987654221122 2489999999
Q ss_pred cccCCCCCceEEEEEeChHHHHHHHHH------------hhhcCCCchHHHHHHHHHhHHH------HHHHHHHHHHHHH
Q 009167 357 KFIGGHNDVLAGSISGSGKLVTQIRNL------------HHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (541)
Q Consensus 357 K~lgg~gd~~gG~lv~~~~li~~l~~~------------~~~~G~~~s~~~a~l~l~~l~t------l~~r~~~~~~~a~ 418 (541)
|++|+.| .|++++++++++.++.. .....++++....+.+..+++. +..+.++..++++
T Consensus 197 K~~g~~G---~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 273 (362)
T 2c0r_A 197 KNLGPSG---VTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKAS 273 (362)
T ss_dssp TTTCCSS---CEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred ccccCcC---cEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9998665 68998888776554321 1112234444444444444432 3455566667888
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
++.+.|++++.+-.+..+ +.+ ..+.+++|.+++ ......|.+.|...++.+..|..
T Consensus 274 ~l~~~L~~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~-~~~~~~~~~~L~~~gi~~~~g~~---------- 329 (362)
T 2c0r_A 274 LIYDAIDQSGGFYRGCVD-----VDS--------RSDMNITFRLAS-EELEKEFVKASEQEGFVGLKGHR---------- 329 (362)
T ss_dssp HHHHHHHTSTTSSEESSC-----GGG--------BCSSEEEEECSC-HHHHHHHHHHHHHTTEESCBCCT----------
T ss_pred HHHHHHHHcCCccccCCC-----hHH--------cCCcEEEEEcCC-cchHHHHHHHHHHCCCeeccCCC----------
Confidence 888888876532112111 110 134578898864 24567788888766776544311
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+.||||++..++++.++.+.++|++
T Consensus 330 ---------------~~~~iRis~~~~~~~e~i~~l~~~l~~ 356 (362)
T 2c0r_A 330 ---------------SVGGLRASIYNAVPYESCEALVQFMEH 356 (362)
T ss_dssp ---------------TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ---------------CCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 024699999976666666666666653
No 158
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.88 E-value=2.1e-21 Score=203.47 Aligned_cols=212 Identities=12% Similarity=0.047 Sum_probs=142.9
Q ss_pred hHHHHHHHHHHHhC--------CCcEEE--eCCHHHHHHHHHHHhc---cCCCEEEEcCCCCcchHHHHHhhcccCCeEE
Q 009167 211 TTVVVEEKMSALEG--------AESTVI--MASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (541)
Q Consensus 211 ~~~~Le~~LA~l~g--------~e~~i~--~sSGs~Ai~~al~all---~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v 277 (541)
...++++++|++++ .++.++ +++|++|+.+++..+. ++||+|+++.|+|.+....+ +..|.++
T Consensus 72 g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~ 147 (401)
T 7aat_A 72 GLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIF----RDAGLQL 147 (401)
T ss_dssp CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHH----HHTTCEE
T ss_pred CCHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHH----HHcCCee
Confidence 45688889998875 345554 6677799998876654 89999999999999876444 3457777
Q ss_pred EEeCCC-------CHHHHHHhccC--CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcccc--
Q 009167 278 TVIDPA-------DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA-- 343 (541)
Q Consensus 278 ~~vd~~-------d~e~Le~al~~--~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~~~-- 343 (541)
..++.. |++++++.+++ .++++|++++||||||.+++ +++|+++|++||+++|+||+|........
T Consensus 148 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 227 (401)
T 7aat_A 148 QAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINR 227 (401)
T ss_dssp EEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHH
T ss_pred EeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccc
Confidence 666532 67766666642 25899999999999998887 66888999999999999999876443211
Q ss_pred ---------cccCCcEEEECCccccCCCCCceEEEEEe---ChH----HHHHHHHHhhhcCCCchHHHHHHHHHhH----
Q 009167 344 ---------LSLGADLVLHSATKFIGGHNDVLAGSISG---SGK----LVTQIRNLHHVLGGALNPNAAYLIIRGM---- 403 (541)
Q Consensus 344 ---------~~~gaDivv~S~sK~lgg~gd~~gG~lv~---~~~----li~~l~~~~~~~G~~~s~~~a~l~l~~l---- 403 (541)
......+++.|+||.+|.+|. ..|+++. +++ +...++..........+...+..+...+
T Consensus 228 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 306 (401)
T 7aat_A 228 DAWALRHFIEQGIDVVLSQSYAKNMGLYGE-RAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPE 306 (401)
T ss_dssp HTHHHHHHHHTTCCCEEEEECTTTSCCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHH
T ss_pred cHHHHHHHHhcCCcEEEEecCCcccccccC-ceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHH
Confidence 122456899999999987764 3566654 555 3344444333333333333333332222
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 404 ------KTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 404 ------~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
+.+....++..++++.+.+.|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 336 (401)
T 7aat_A 307 LRKEWLVEVKGMADRIISMRTQLVSNLKKE 336 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 223344455566777888888765
No 159
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.88 E-value=1.1e-21 Score=209.85 Aligned_cols=286 Identities=12% Similarity=-0.049 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHhCCC--c-----EEEeCCHHHHHHHHHHHhcc--------CC-----CEEEEcCCCCcchHHHHHhhcc
Q 009167 212 TVVVEEKMSALEGAE--S-----TVIMASGMSASTVMLLALVP--------AG-----GHIVTTTDCYRKTRIFIETVLP 271 (541)
Q Consensus 212 ~~~Le~~LA~l~g~e--~-----~i~~sSGs~Ai~~al~all~--------pG-----d~Vlv~~~~y~~~~~~~~~~l~ 271 (541)
.+++++.+++++|.+ . ++++++|++|+.+++.++.. +| ++|++++ .|.... ..+.
T Consensus 83 ~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~----~~~~ 157 (452)
T 2dgk_A 83 DLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWH----KFAR 157 (452)
T ss_dssp HHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHH----HHHH
T ss_pred HHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHH----HHHH
Confidence 446677779999974 2 67888889999999887753 55 5999999 886644 3345
Q ss_pred cCCeEEEEeCCC------CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC------CCEEEEeCCCCCCC
Q 009167 272 KMGITATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATPL 339 (541)
Q Consensus 272 ~~Gi~v~~vd~~------d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~------gi~lIvDea~a~~~ 339 (541)
..|++++.++.+ |+++|++++++ +|++|++++|+||||.+.|+++|+++|+++ |+++|+|++|+.+.
T Consensus 158 ~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~ 236 (452)
T 2dgk_A 158 YWDVELREIPMRPGQLFMDPKRMIEACDE-NTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFL 236 (452)
T ss_dssp HTTCEEEECCCBTTBCSCCHHHHHHHCCT-TEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGT
T ss_pred HcCceEEEEecCCCCCeECHHHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHH
Confidence 568888888753 79999999987 499999999999999999999999999995 99999999987643
Q ss_pred c---cc--cc---ccCCcEEEECCccccCCCCCceEEEEEeCh-HHH-HHHHHHhhhcC----------CCc--hHHHHH
Q 009167 340 N---QK--AL---SLGADLVLHSATKFIGGHNDVLAGSISGSG-KLV-TQIRNLHHVLG----------GAL--NPNAAY 397 (541)
Q Consensus 340 ~---~~--~~---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li-~~l~~~~~~~G----------~~~--s~~~a~ 397 (541)
. .. +. ..++|+++.|+||++.++. .+|+++.++ +++ +.+.......+ ... .....|
T Consensus 237 ~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 314 (452)
T 2dgk_A 237 APFVAPDIVWDFRLPRVKSISASGHKFGLAPL--GCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQY 314 (452)
T ss_dssp HHHHCTTCCCSTTSTTEEEEEEETTTTTCCCS--SCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHH
T ss_pred HHhhCccchhhcCCCCCcEEEECcccccCCCC--CeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHH
Confidence 2 11 11 2378999999999875544 257777754 333 33321111111 111 233444
Q ss_pred HHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCH---HHHHHH
Q 009167 398 LIIRGM--KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL---TATIKF 472 (541)
Q Consensus 398 l~l~~l--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~---~~~~~~ 472 (541)
.+++.+ +.+..++++..++++++.+.|++.+.++.+ .|+.+. ...+++.|.+++.. ....++
T Consensus 315 aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~------------~~~~~v~f~~~~~~~~~~~~~~l 381 (452)
T 2dgk_A 315 YEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFI-CTGRPD------------EGIPAVCFKLKDGEDPGYTLYDL 381 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE-EECCTT------------TBSSEEEEEECTTCCCSCCHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCCCCC------------CCeEEEEEEecCcccccCCHHHH
Confidence 444433 445667778888999999999988766433 332110 13578999987421 123456
Q ss_pred HHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 473 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 473 l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
.+.|...++.++. + ..|... -..+.+|+|++...+++.++.|.++|
T Consensus 382 ~~~L~~~Gi~v~~--~----~~~~~~--------------~~~~~lRis~~~~~t~e~id~li~~l 427 (452)
T 2dgk_A 382 SERLRLRGWQVPA--F----TLGGEA--------------TDIVVMRIMCRRGFEMDFAELLLEDY 427 (452)
T ss_dssp HHHHHHTTCBCCE--E----ECSTTC--------------TTCEEEEEECCTTCCHHHHHHHHHHH
T ss_pred HHHHHhcCCeeee--e----eCCccc--------------CCeEEEEEEecCCCCHHHHHHHHHHH
Confidence 6666555543321 1 111100 02458999999754444444444433
No 160
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.88 E-value=9.9e-22 Score=215.29 Aligned_cols=159 Identities=13% Similarity=0.152 Sum_probs=120.5
Q ss_pred hHHHHHHHHHHHh----CC-------CcEEEeCCHHHHHHHHHHH-----hccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009167 211 TTVVVEEKMSALE----GA-------ESTVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~-------e~~i~~sSGs~Ai~~al~a-----ll~pGd~Vlv~~~~y~~~~~~~~~~l~~~G 274 (541)
...++++.+|+++ +. ++++++++|++|+.+++.+ ++++||+|+++.|+|.+.. ..+...|
T Consensus 139 g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~----~~~~~~g 214 (533)
T 3f6t_A 139 CLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYL----RIPELKD 214 (533)
T ss_dssp CCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHH----TSGGGGG
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHH----HHHHHcC
Confidence 3456777777765 33 3455555666999999998 7899999999999998854 3445556
Q ss_pred eEEEEeCCC---------CHHHHHHhccCCCceEEEEeCCCCCCCccccHH---HHHHHHH-hCCCEEEEeCCCCCCCcc
Q 009167 275 ITATVIDPA---------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK---LVSDLCH-KKGAIVCIDGTFATPLNQ 341 (541)
Q Consensus 275 i~v~~vd~~---------d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~---~Ia~la~-~~gi~lIvDea~a~~~~~ 341 (541)
.++..++.. |+++|++++++ ++++|++++|+||||.+++.+ +|+++|+ ++|+++|+|++|+.....
T Consensus 215 ~~~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~ 293 (533)
T 3f6t_A 215 YELVEVDLHSYEKNDWEIEPNEIEKLKDP-SIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPN 293 (533)
T ss_dssp SEEEEECCCEETTTTSEECHHHHHHHSCT-TEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTT
T ss_pred CeEEEEEecCCcccCCCCCHHHHHHHhCC-CCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccC
Confidence 777766542 79999999987 599999999999999999876 7888888 689999999998753321
Q ss_pred --c--ccccCCcEEEECCccccCCCCCceEEEEEeChH
Q 009167 342 --K--ALSLGADLVLHSATKFIGGHNDVLAGSISGSGK 375 (541)
Q Consensus 342 --~--~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~ 375 (541)
. ....+.++++.|+||.+|.+| ...|+++++++
T Consensus 294 ~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l~~~~~ 330 (533)
T 3f6t_A 294 FKSIYSVVPYNTMLVYSYSKLFGCTG-WRLGVIALNEK 330 (533)
T ss_dssp CCCHHHHSGGGEEEEEESHHHHTCGG-GCEEEEEEESS
T ss_pred ccCHhhcCCCCEEEEecCcccCCCcc-cceEEEEECcH
Confidence 1 112245699999999998665 34688887654
No 161
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.88 E-value=3.7e-21 Score=202.08 Aligned_cols=250 Identities=17% Similarity=0.108 Sum_probs=159.1
Q ss_pred HHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHh-hcccCCeEEEEeCC-----CCHH
Q 009167 214 VVEEKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVIDP-----ADME 286 (541)
Q Consensus 214 ~Le~~LA~l~g~e~~-i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~-~l~~~Gi~v~~vd~-----~d~e 286 (541)
.+++.+++++|.+.. +++++|++|+.+++.+++++||+|+++.++|++....... .....++.+..++. .|++
T Consensus 75 ~~~~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 154 (417)
T 3n0l_A 75 LAIERCKKLFNCKFANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYE 154 (417)
T ss_dssp HHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHH
T ss_pred HHHHHHHHHhCCCCcceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHH
Confidence 345589999998755 8899999999999999999999999999999875432111 11123444444443 4899
Q ss_pred HHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-----ccccccCCcEEEECCccccCC
Q 009167 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATKFIGG 361 (541)
Q Consensus 287 ~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-----~~~~~~gaDivv~S~sK~lgg 361 (541)
+|++++++.++++|++++|+| |.+.|+++|.++|++||++||+|+++..+.. ..... ++|+++.|+||+++|
T Consensus 155 ~l~~~i~~~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~g 231 (417)
T 3n0l_A 155 KVREIAKKEKPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-YAHVVSSTTHKTLRG 231 (417)
T ss_dssp HHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-TCSEEEEESSTTTCS
T ss_pred HHHHHHHhcCCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-cceEEEeeCccccCC
Confidence 999999732589999888776 8899999999999999999999999643221 11222 479999999999966
Q ss_pred CCCceEEEEEeC-hHHHHHHHHHhhhc--CCCchHHHHH--HHHHh-H-HHHHHHHHHHHHHHHHHHHHHHhCCCceEEe
Q 009167 362 HNDVLAGSISGS-GKLVTQIRNLHHVL--GGALNPNAAY--LIIRG-M-KTLHLRVQQQNSTALRMAKILEAHPKVKRVH 434 (541)
Q Consensus 362 ~gd~~gG~lv~~-~~li~~l~~~~~~~--G~~~s~~~a~--l~l~~-l-~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~ 434 (541)
+. +|+++++ +++++.++...... ++......+. .++.. + +.+..+.++..++++.+.+.|++ ..+..+
T Consensus 232 ~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~- 306 (417)
T 3n0l_A 232 PR---GGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKFKLV- 306 (417)
T ss_dssp CS---CEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEG-
T ss_pred CC---eeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCceec-
Confidence 53 6999988 68888877654321 1212221111 11111 1 33455666777788888888887 333211
Q ss_pred CCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccC
Q 009167 435 YPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 435 ~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G 486 (541)
.++ ..++++++.+.+.......+.+.|...++.++.+
T Consensus 307 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~ 343 (417)
T 3n0l_A 307 SDG---------------TDNHLVLMSFLDREFSGKDADLALGNAGITANKN 343 (417)
T ss_dssp GGS---------------CSSSEEEEECTTSSSCHHHHHHHHHHTTEECEEC
T ss_pred cCC---------------CCceEEEEEcccCCCCHHHHHHHHHHcCeEEecc
Confidence 111 1356788887532112334444454456666543
No 162
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.88 E-value=2.5e-21 Score=205.91 Aligned_cols=291 Identities=14% Similarity=0.081 Sum_probs=190.7
Q ss_pred CCccCCCCchhHHHHHHHHHHHhC--C-CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhccc---
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALEG--A-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPK--- 272 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g--~-e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l~~--- 272 (541)
.+.+.++.++..++++++|+++++ . +++++++||++|+..++..+ ..++++||+.++.|++...........
T Consensus 77 ~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 156 (439)
T 3dxv_A 77 GATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQ 156 (439)
T ss_dssp CSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC------
T ss_pred CccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCch
Confidence 345677888999999999999994 4 57888899999999999875 346788888898887744322111100
Q ss_pred --------CCeEEEEeCCC----------CHHHHHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCC
Q 009167 273 --------MGITATVIDPA----------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGA 327 (541)
Q Consensus 273 --------~Gi~v~~vd~~----------d~e~Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi 327 (541)
....+..++.. |+++|+++++ +.++++|++++++|++|.+.+ +++|.++|++||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~ 236 (439)
T 3dxv_A 157 ADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGI 236 (439)
T ss_dssp -------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTC
T ss_pred hhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 00012233333 5899999983 335899999999999999998 9999999999999
Q ss_pred EEEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHH
Q 009167 328 IVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR 401 (541)
Q Consensus 328 ~lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~ 401 (541)
+||+||+|... ..........|++ |++|.+++ | ...|++++++++++.+......... .++..+..++.
T Consensus 237 ~li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G-~riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~a 311 (439)
T 3dxv_A 237 LVVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGLGG-G-LPLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLA 311 (439)
T ss_dssp EEEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGGGT-T-SCCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHH
T ss_pred EEEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchhcC-C-cceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHH
Confidence 99999998632 1112223346766 78999986 4 3578999998888776543222223 56666655555
Q ss_pred hHHHHH--HHHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc-------CCHHH
Q 009167 402 GMKTLH--LRVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD-------GDLTA 468 (541)
Q Consensus 402 ~l~tl~--~r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~-------~~~~~ 468 (541)
.++.+. ...++..++.+++.+.|++ ++.+..+ ++.|.++++++. +....
T Consensus 312 al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~ 373 (439)
T 3dxv_A 312 VLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDI------------------RGRGLACGMELVCDRQSREPARAE 373 (439)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEEEEETTTTEECHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EEEEEEEEEEEecCccccCCCHHH
Confidence 555432 2344455555555555543 3433222 235788999883 13345
Q ss_pred HHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC----HHHHHHHHHHHHh
Q 009167 469 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED----FEDLKADVLQALH 539 (541)
Q Consensus 469 ~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~----~edli~dL~~AL~ 539 (541)
...+.+.|...|+.+..|+. ..+.+||+++... .+++++.|.++|+
T Consensus 374 ~~~~~~~l~~~Gv~v~~~~~-------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 423 (439)
T 3dxv_A 374 TAKLIYRAYQLGLVVYYVGM-------------------------NGNVLEFTPPLTITETDIHKALDLLDRAFS 423 (439)
T ss_dssp HHHHHHHHHHHTEECEEEST-------------------------TSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEeecCC-------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 66677776655665554321 2478999876543 3445555555554
No 163
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.88 E-value=2.6e-22 Score=206.71 Aligned_cols=275 Identities=11% Similarity=0.030 Sum_probs=181.9
Q ss_pred hHHHHHHHHHHHhCCC---cEEEeCCH-HHHHHHHHHHhccC---CCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-
Q 009167 211 TTVVVEEKMSALEGAE---STVIMASG-MSASTVMLLALVPA---GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e---~~i~~sSG-s~Ai~~al~all~p---Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~- 282 (541)
..+++++.+++++|.+ ++++++++ ++|+.+++.+++.+ ||+|+++.++|... ..+...| ++++++.
T Consensus 49 ~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-----~~~~~~g-~~~~v~~~ 122 (360)
T 1w23_A 49 VHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-----KEAKLLG-ETHIAAST 122 (360)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-----HHHHTTS-EEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-----HHHHHhC-CeEEeecc
Confidence 5789999999999985 34555565 79999999998865 56777766555431 1234567 7777653
Q ss_pred -----CCHHHHHH-hccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCc
Q 009167 283 -----ADMEGLEA-ALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSAT 356 (541)
Q Consensus 283 -----~d~e~Le~-al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~s 356 (541)
.|+++|++ ++++ ++++|++++|+||||.++| ++++++|++||+|++++.+.....+. ..|+++.|+|
T Consensus 123 ~~~~~~d~~~l~~~~i~~-~~k~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~~~~~-~~di~~~s~s 195 (360)
T 1w23_A 123 KANSYQSIPDFSEFQLNE-NDAYLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRPLKVN-QFGMIYAGAQ 195 (360)
T ss_dssp GGGTSCSCCCGGGCCCCT-TEEEEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSCCCGG-GCSEEEEETT
T ss_pred cccCcCCccchHhhccCC-CCCEEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCCCcCcc-cCCEEEEEcc
Confidence 36788888 8876 5999999999999999987 33448999999999987654221121 1389999999
Q ss_pred cccCCCCCceEEEEEeChHHHHHHHHHhh------------hcCCCchHHHHHHHHHhHHH------HHHHHHHHHHHHH
Q 009167 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH------------VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (541)
Q Consensus 357 K~lgg~gd~~gG~lv~~~~li~~l~~~~~------------~~G~~~s~~~a~l~l~~l~t------l~~r~~~~~~~a~ 418 (541)
|++++.| .|+++++++++++++.... ...++.+....+.+...++. +....++..++++
T Consensus 196 K~~~~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 272 (360)
T 1w23_A 196 KNLGPSG---VTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAK 272 (360)
T ss_dssp TTTSCTT---CEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccCCCC---cEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9998665 5888888877665543210 11123344433333333433 3445566677888
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
.+.+.|++.+.+..... .|.. ..+.+++|.+++ .....++++.|...++.+..|..
T Consensus 273 ~l~~~L~~~~~~~~~~~-----~~~~--------~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~~~~~---------- 328 (360)
T 1w23_A 273 IIYDTIDESNGFYVGHA-----EKGS--------RSLMNVTFNLRN-EELNQQFLAKAKEQGFVGLNGHR---------- 328 (360)
T ss_dssp HHHHHHHTTTTSSEESS-----CGGG--------BCSSEEEEECSS-HHHHHHHHHHHHHTTEESCBCCT----------
T ss_pred HHHHHHHHccCcccccC-----Cchh--------ccCcEEEEEcCC-CccHHHHHHHHHHCCeeeecCCC----------
Confidence 88899987764311110 0110 124489999874 34566788887766776644321
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
.++.||||++..++++.++.+.++|++
T Consensus 329 ---------------~~~~iRis~~~~~~~~~i~~~~~~l~~ 355 (360)
T 1w23_A 329 ---------------SVGGCRASIYNAVPIDACIALRELMIQ 355 (360)
T ss_dssp ---------------TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ---------------CCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 146899999987666666766666653
No 164
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.88 E-value=8.8e-21 Score=199.47 Aligned_cols=215 Identities=14% Similarity=0.084 Sum_probs=147.5
Q ss_pred CchhHHHHHHHHHHHh-CC-------CcEEE--eCCHHHHHHHHHH--HhccCC-----CEEEEcCCCCcchHHHHHhhc
Q 009167 208 GNPTTVVVEEKMSALE-GA-------ESTVI--MASGMSASTVMLL--ALVPAG-----GHIVTTTDCYRKTRIFIETVL 270 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~-g~-------e~~i~--~sSGs~Ai~~al~--all~pG-----d~Vlv~~~~y~~~~~~~~~~l 270 (541)
+.+...+|+++||+++ +. +++++ +++|++|+.+++. .++.+| |+|+++.|+|++....+
T Consensus 72 ~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~---- 147 (412)
T 1ajs_A 72 PILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVF---- 147 (412)
T ss_dssp CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHH----
T ss_pred CCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHH----
Confidence 3455679999999998 42 56777 7778899999854 556899 99999999999865433
Q ss_pred ccCCeE-EEEeCC---C----CHHHHHHhccC--CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCC
Q 009167 271 PKMGIT-ATVIDP---A----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 271 ~~~Gi~-v~~vd~---~----d~e~Le~al~~--~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~ 337 (541)
...|.+ +..++. + |+++|++++++ .++++|++++|+||||.+++ +++|+++|+++|++||+||+|..
T Consensus 148 ~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~ 227 (412)
T 1ajs_A 148 TTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQG 227 (412)
T ss_dssp HHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTT
T ss_pred HHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccc
Confidence 345666 666654 2 78999988864 14788989999999999987 55899999999999999999765
Q ss_pred CCcc----c--c---cc--cCCcEEEECCccccCCCCCceEEEEEe---ChHH----HHHHHHHhhhcCCCchHHHHHHH
Q 009167 338 PLNQ----K--A---LS--LGADLVLHSATKFIGGHNDVLAGSISG---SGKL----VTQIRNLHHVLGGALNPNAAYLI 399 (541)
Q Consensus 338 ~~~~----~--~---~~--~gaDivv~S~sK~lgg~gd~~gG~lv~---~~~l----i~~l~~~~~~~G~~~s~~~a~l~ 399 (541)
.... . + +. ...++++.|+||.+++.| ...|++++ ++++ ++.++..........++..++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 306 (412)
T 1ajs_A 228 FASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYN-ERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIV 306 (412)
T ss_dssp TTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHH
T ss_pred ccCCcccccchHHHHHhccCCcEEEEEecccccCCCC-cceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHH
Confidence 4321 1 1 11 123488999999998766 35688887 7774 44444422222222234444333
Q ss_pred HHhHH----------HHHHHHHHHHHHHHHHHHHHHhC
Q 009167 400 IRGMK----------TLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 400 l~~l~----------tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
...++ .+....++..++.+.+.+.|++.
T Consensus 307 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (412)
T 1ajs_A 307 ARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEAL 344 (412)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33333 23334445556777788888765
No 165
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.79 E-value=3.6e-24 Score=224.32 Aligned_cols=283 Identities=15% Similarity=0.114 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-
Q 009167 212 TVVVEEKMSALE----G----AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (541)
Q Consensus 212 ~~~Le~~LA~l~----g----~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~- 282 (541)
..++++++++++ | .+.++++++|++|+.+++.+++++||+|+++.++|++.... +...|.++..++.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~ 143 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARS----VRLNNRKLVSNSLK 143 (392)
Confidence 667788887764 3 23455566667999999999999999999999999986533 3445666655543
Q ss_pred -------CCHHHHHHhccCCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc-----cc--c-
Q 009167 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KA--L- 344 (541)
Q Consensus 283 -------~d~e~Le~al~~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-----~~--~- 344 (541)
.|+++|++++++.++++|++++|+||||.+++ +++|.++|+++|++||+||+|...... .. +
T Consensus 144 ~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 223 (392)
T 3b1d_A 144 EENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVS 223 (392)
Confidence 37788998887335899999999999999987 889999999999999999998753311 11 1
Q ss_pred c--cCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcC-CCchHHHHHHHHHhHHH----HHHHHHHHHHH
Q 009167 345 S--LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLG-GALNPNAAYLIIRGMKT----LHLRVQQQNST 416 (541)
Q Consensus 345 ~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~~~~~G-~~~s~~~a~l~l~~l~t----l~~r~~~~~~~ 416 (541)
. .+.++++.|+||.++.+| ...|++++++ ++++.++.....++ ...++..++.+...++. +....++..++
T Consensus 224 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 302 (392)
T 3b1d_A 224 PDFKDFALVLSSATKTFNIAG-TKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEEN 302 (392)
Confidence 1 345689999999997454 3578888764 58888776554443 12344444433333332 22233334455
Q ss_pred HHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhccCcccE-EEEEEcCCHHHHHHHHHHcc-CcCeecccCCcccccc
Q 009167 417 ALRMAKILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGV-VSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVD 493 (541)
Q Consensus 417 a~~la~~L~~-~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~-vsf~l~~~~~~~~~~l~~L~-~~~iavS~G~~~sl~~ 493 (541)
++.+.+.|++ +|.+..+ .+.|++ ++++++........+.+.|. ..++.+..|..+..
T Consensus 303 ~~~l~~~l~~~~~~~~~~------------------~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~-- 362 (392)
T 3b1d_A 303 IQFAVEYFAQEAPRLKVM------------------KPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGS-- 362 (392)
Confidence 5666666655 3433211 112344 46777531123456667663 56777766644210
Q ss_pred cCccccccCCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHH
Q 009167 494 QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQAL 538 (541)
Q Consensus 494 ~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--~~edli~dL~~AL 538 (541)
..++.+||+++.. +.++.++.|.++|
T Consensus 363 -------------------~~~~~iRi~~~~~~e~i~~~l~~l~~~l 390 (392)
T 3b1d_A 363 -------------------EGELHARLNIAAPKSLVEEICKRIVCCL 390 (392)
Confidence 1246899999863 3344444444444
No 166
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.87 E-value=6.8e-21 Score=200.07 Aligned_cols=255 Identities=12% Similarity=0.081 Sum_probs=161.1
Q ss_pred chhHHHHHHHHHHH--hC-C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE-EEEeCC
Q 009167 209 NPTTVVVEEKMSAL--EG-A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT-ATVIDP 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l--~g-~--e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~-v~~vd~ 282 (541)
.+...+|+++||++ .| . +++++++++++++.+++ .++++||+|+++.|+|++....+ ...|.+ +..++.
T Consensus 74 ~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~~-~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~ 148 (400)
T 3asa_A 74 DFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRLL-SFFGPNQTVAIQDPSYPAYLDIA----RLTGAKEIIALPC 148 (400)
T ss_dssp TTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHHH-HHHCSSCEEEEEESCCHHHHHHH----HHTTCSEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHHH-HHcCCCCEEEECCCCcHHHHHHH----HHcCCcceEeccc
Confidence 34567899999999 46 3 45666666779998865 55689999999999998865433 345666 666654
Q ss_pred CCHHHHHHhccC-CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCC-----ccccccc----CCc
Q 009167 283 ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL-----NQKALSL----GAD 349 (541)
Q Consensus 283 ~d~e~Le~al~~-~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~-----~~~~~~~----gaD 349 (541)
++.+.+...+++ .++++|++++|+||||.++| +++|+++|+++|+++|+|++|.... ......+ +.+
T Consensus 149 ~~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (400)
T 3asa_A 149 LQENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCA 228 (400)
T ss_dssp CGGGTTCCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTE
T ss_pred chhcCcccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCce
Confidence 311111111111 25899999999999999998 5578889999999999999987421 1112222 245
Q ss_pred EEEECCccccCCCCCceEEEEEeChHH-------HHHHHHHhh-hcCCCchHHHHHHHHHhHHH--HHHHHHHHHHHHHH
Q 009167 350 LVLHSATKFIGGHNDVLAGSISGSGKL-------VTQIRNLHH-VLGGALNPNAAYLIIRGMKT--LHLRVQQQNSTALR 419 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv~~~~l-------i~~l~~~~~-~~G~~~s~~~a~l~l~~l~t--l~~r~~~~~~~a~~ 419 (541)
+++.|+||.+|.+| ...|++++++++ ++.+..... ....+.++.....+...++. +....++..++++.
T Consensus 229 i~~~s~sK~~g~~G-lriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 307 (400)
T 3asa_A 229 IEINSFSKPLGFAG-IRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDL 307 (400)
T ss_dssp EEEEECCGGGTTTT-CCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred EEEecchhhcCCcc-hheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 88999999998555 347899988877 565543221 11122344444444444443 23344555577788
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEE-EcCCHHHHHHHHHHcc-CcCeecccCCc
Q 009167 420 MAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE-VDGDLTATIKFIDALK-IPYIAPSFGGC 488 (541)
Q Consensus 420 la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~-l~~~~~~~~~~l~~L~-~~~iavS~G~~ 488 (541)
+.+.|++. ++. +..|. .|.++++. ++.+. ...++.+.|. ..++.+..|..
T Consensus 308 l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~~~-~~~~~~~~l~~~~gv~v~~g~~ 359 (400)
T 3asa_A 308 LRKALLAT-GFE-VFGGE----------------HAPYLWVKPTQANI-SDRDLFDFFLREYHIAITPGIG 359 (400)
T ss_dssp HHHHHHHT-TCE-EEECS----------------SSSEEEEECCCTTC-CTTTHHHHHHHHHSEECEEGGG
T ss_pred HHHHHHHC-CCe-eeCCC----------------CceEEEEeccCCCC-CHHHHHHHHHHhCCEEEeChhH
Confidence 88888875 342 22121 36688998 76321 1223444432 34777776654
No 167
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.87 E-value=7.7e-21 Score=200.64 Aligned_cols=286 Identities=15% Similarity=0.164 Sum_probs=182.2
Q ss_pred CCCCchhHHHHHHHHHHHh-C-C-CcEEEeCCHHHHHHHHHH---HhccCCCEEEEcCCCCcchHHHHHhhcc-------
Q 009167 205 GRYGNPTTVVVEEKMSALE-G-A-ESTVIMASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTRIFIETVLP------- 271 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~-g-~-e~~i~~sSGs~Ai~~al~---all~pGd~Vlv~~~~y~~~~~~~~~~l~------- 271 (541)
.++..+...+|+++|++++ | . ++++++++|++|+.+++. .+.++| +|++.++.|++..........
T Consensus 79 ~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~ 157 (426)
T 1sff_A 79 QVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSA 157 (426)
T ss_dssp TTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTT
T ss_pred cccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCcccccc
Confidence 4556788999999999999 5 3 456777788899999988 667776 899999999875432212211
Q ss_pred cCCe---EEEEeCCC----------CHHHHHHhccC----CCceEEEEeC-CCCCCCcccc----HHHHHHHHHhCCCEE
Q 009167 272 KMGI---TATVIDPA----------DMEGLEAALNN----NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIV 329 (541)
Q Consensus 272 ~~Gi---~v~~vd~~----------d~e~Le~al~~----~~tklV~les-P~NPtG~i~d----l~~Ia~la~~~gi~l 329 (541)
.++. .+..++.. |+++|++++++ .++++|+++. ++| ||.+.+ +++|.++|++||++|
T Consensus 158 ~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~l 236 (426)
T 1sff_A 158 GMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIML 236 (426)
T ss_dssp TSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEE
T ss_pred ccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEE
Confidence 1111 13334431 68899988862 2478888854 456 997777 999999999999999
Q ss_pred EEeCCCCCCCc------ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH
Q 009167 330 CIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM 403 (541)
Q Consensus 330 IvDea~a~~~~------~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l 403 (541)
|+||+|..... .+.....+|++ |+||.+++ | ...|++++++++++.+...........++..+..+...+
T Consensus 237 i~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-G-lriG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal 312 (426)
T 1sff_A 237 IADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-G-FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVL 312 (426)
T ss_dssp EEECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGT-S-SCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHH
T ss_pred EEechhhccCcccchhhhhhcCCCCCEE--EEcccccC-C-CceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHH
Confidence 99999874211 12222345655 78899997 5 457999998888776653222222334566655555555
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-------CHHHHH
Q 009167 404 KTLHL--RVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DLTATI 470 (541)
Q Consensus 404 ~tl~~--r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-------~~~~~~ 470 (541)
+.+.. ..++..++.+.+.+.|++ ++.+.. ..+.|+++++++.+ ......
T Consensus 313 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~~~~~~~~ 374 (426)
T 1sff_A 313 KVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGD------------------VRGLGAMIAIELFEDGDHNKPDAKLTA 374 (426)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEE------------------EEEETTEEEEEEBGGGCTTSBCHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEE------------------EEEEEEEEEEEEecCccccCCChHHHH
Confidence 54432 334455666666666654 222211 12247899999952 223456
Q ss_pred HHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHH----HHHHHHHHHh
Q 009167 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED----LKADVLQALH 539 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~ed----li~dL~~AL~ 539 (541)
++.+.|...++.+..|+. .++.|||+++...+++ +++.|.++++
T Consensus 375 ~l~~~l~~~gi~v~~~~~-------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 422 (426)
T 1sff_A 375 EIVARARDKGLILLSCGP-------------------------YYNVLRILVPLTIEDAQIRQGLEIISQCFD 422 (426)
T ss_dssp HHHHHHHHTTEECEEEST-------------------------TSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEecCCC-------------------------CCCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 677777656776665432 1468999997544433 4444444443
No 168
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.87 E-value=1.2e-20 Score=200.01 Aligned_cols=289 Identities=13% Similarity=0.084 Sum_probs=183.5
Q ss_pred cCCCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhc---c----CCCEEEEcCCCCcchHHHHHhhcc---
Q 009167 204 YGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV---P----AGGHIVTTTDCYRKTRIFIETVLP--- 271 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g--~e~~i~~sSGs~Ai~~al~all---~----pGd~Vlv~~~~y~~~~~~~~~~l~--- 271 (541)
+++|.++...+++++|+++++ .++++++++|++|+.++++.+. + |||+|++.++.|++..........
T Consensus 80 ~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~ 159 (429)
T 1s0a_A 80 FGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDN 159 (429)
T ss_dssp CSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTT
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCch
Confidence 456778888999999999996 3667888889999999988653 2 699999999999874322211111
Q ss_pred ---------cCCeEEEEeC---------CCCHHHHHHhccC--CCceEEEEeCC-CCCCCcccc----HHHHHHHHHhCC
Q 009167 272 ---------KMGITATVID---------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKG 326 (541)
Q Consensus 272 ---------~~Gi~v~~vd---------~~d~e~Le~al~~--~~tklV~lesP-~NPtG~i~d----l~~Ia~la~~~g 326 (541)
..++....++ ..|+++|++++++ .++++|+++.+ +||||.+++ +++|.++|++||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~ 239 (429)
T 1s0a_A 160 SMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREG 239 (429)
T ss_dssp TTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHT
T ss_pred hhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 0123333332 2478999998862 24788888666 799998887 999999999999
Q ss_pred CEEEEeCCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh--h-hcC--CCchHHH
Q 009167 327 AIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--H-VLG--GALNPNA 395 (541)
Q Consensus 327 i~lIvDea~a~~-~-----~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~-~~G--~~~s~~~ 395 (541)
++||+||+|... . .........|++ |++|.++++ -...|++++++++++.+.... . ..+ ...++..
T Consensus 240 ~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~~G-~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~ 316 (429)
T 1s0a_A 240 ILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALTGG-TMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLA 316 (429)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTS-SSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHH
T ss_pred CEEEEeehhhCCcccchHHHhhhcCCCCCEE--EecccccCC-CccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHH
Confidence 999999998632 1 112223456776 577999863 134688889999888776521 0 011 2235555
Q ss_pred HHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHH
Q 009167 396 AYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFI 473 (541)
Q Consensus 396 a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l 473 (541)
+..+...++.+. ...++..++.+++.+.|++... +|.+. ..++.|+++++++++. .....+.
T Consensus 317 ~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~~~~~g~~~~~~~~~~-~~~~~l~ 380 (429)
T 1s0a_A 317 CAAANASLAILESGDWQQQVADIEVQLREQLAPARD-----AEMVA----------DVRVLGAIGVVETTHP-VNMAALQ 380 (429)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGG-----CTTEE----------EEEEETTEEEEEESSC-BCHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-----CCCEE----------EEEEeeEEEEEEECCc-ccHHHHH
Confidence 555555555432 2344555667777777765310 12110 0122467899999742 1234555
Q ss_pred HHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009167 474 DALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 474 ~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~ 539 (541)
+.|...++.++.+ .+.||||++...+++.++.+.++|+
T Consensus 381 ~~l~~~Gi~v~~~----------------------------~~~iRis~~~~~t~e~i~~~~~~l~ 418 (429)
T 1s0a_A 381 KFFVEQGVWIRPF----------------------------GKLIYLMPPYIILPQQLQRLTAAVN 418 (429)
T ss_dssp HHHHHTTEECCCB----------------------------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHCCCEEecc----------------------------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 5554446544320 2589999886665555555555554
No 169
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.87 E-value=2e-21 Score=204.04 Aligned_cols=253 Identities=16% Similarity=0.139 Sum_probs=160.3
Q ss_pred hhHHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHh-hcccCCeEEEEe--C---C
Q 009167 210 PTTVVVEEKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVI--D---P 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e~~-i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~-~l~~~Gi~v~~v--d---~ 282 (541)
...+..++.+++++|.+.. +++++|++|+..++.+++++||+|+++.++|++....... .+...++....+ + .
T Consensus 76 ~~~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 155 (420)
T 3gbx_A 76 VVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGK 155 (420)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCS
T ss_pred HHHHHHHHHHHHHhCCCCceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCC
Confidence 3344566899999998654 6689999999999999999999999999999874311111 111112222222 2 2
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-----ccccccCCcEEEECCcc
Q 009167 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLVLHSATK 357 (541)
Q Consensus 283 ~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-----~~~~~~gaDivv~S~sK 357 (541)
.|+++|+++++++++++|++++|+||+ +.|+++|.++|++||++||+||+++.+.. ..... .+|+++.|+||
T Consensus 156 ~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~di~~~s~sK 232 (420)
T 3gbx_A 156 IDYDEMAKLAKEHKPKMIIGGFSAYSG--VVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAHVVTTTTHK 232 (420)
T ss_dssp CCHHHHHHHHHHHCCSEEEECCTTCCS--CCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSSEEEEESSG
T ss_pred cCHHHHHHHHHhcCCeEEEEecCccCC--ccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccc-cCCEEEeeccc
Confidence 589999999975348999999999864 78999999999999999999999754321 12222 48999999999
Q ss_pred ccCCCCCceEEEEEeCh---HHHHHHHHHhhh--cCCCchHHHHH--HHH-HhH-HHHHHHHHHHHHHHHHHHHHHHhCC
Q 009167 358 FIGGHNDVLAGSISGSG---KLVTQIRNLHHV--LGGALNPNAAY--LII-RGM-KTLHLRVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 358 ~lgg~gd~~gG~lv~~~---~li~~l~~~~~~--~G~~~s~~~a~--l~l-~~l-~tl~~r~~~~~~~a~~la~~L~~~p 428 (541)
+++|+. ||++++++ ++.+.++..... .+....+..+. .++ ..+ +.+..+.++..++++++.+.|++.
T Consensus 233 ~~~g~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 308 (420)
T 3gbx_A 233 TLAGPR---GGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR- 308 (420)
T ss_dssp GGCSCS---CEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCCCCC---ceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-
Confidence 997553 69999987 777776654322 22222222221 122 111 344555667778888888888773
Q ss_pred CceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeeccc
Q 009167 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 485 (541)
Q Consensus 429 ~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~ 485 (541)
.+. +..++ ..++++++.++........+.+.|+..++.+..
T Consensus 309 g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~ 349 (420)
T 3gbx_A 309 GYK-VVSGG---------------TENHLFLLDLVDKNLTGKEADAALGRANITVNK 349 (420)
T ss_dssp TCE-EGGGS---------------CSSSEEEEECGGGTCCHHHHHHHHHHTTEECEE
T ss_pred CCe-eccCC---------------CCCeEEEEEcCCCCCCHHHHHHHHHHCCcEecc
Confidence 332 21110 145688888753111233444455545666654
No 170
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.87 E-value=1e-20 Score=202.52 Aligned_cols=224 Identities=13% Similarity=0.107 Sum_probs=152.3
Q ss_pred CCccCCCCchhHHHHHHHHHHHh-CCC-------cEEE--eCCHHHHHHH--HHHHhccCCCEEEEcCCCCcchHHHHHh
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALE-GAE-------STVI--MASGMSASTV--MLLALVPAGGHIVTTTDCYRKTRIFIET 268 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~-g~e-------~~i~--~sSGs~Ai~~--al~all~pGd~Vlv~~~~y~~~~~~~~~ 268 (541)
.+.|. +.....++++++++++ |.+ ++++ +++|++|+.+ .+.+++.+||+|++++|+|.+....+..
T Consensus 87 ~~~Y~--~~~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~ 164 (448)
T 3meb_A 87 NKEYP--PVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDK 164 (448)
T ss_dssp CCSCC--CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHH
T ss_pred CCCCC--CCcchHHHHHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHh
Confidence 34454 3345678999999987 653 4566 7777899987 5567788999999999999987655542
Q ss_pred hcccCCeEEEEeCC---C-----CHHHHHHhccC--CCceEEEEeCCCCCCCccccHH---HHHHHHHhCCCEEEEeCCC
Q 009167 269 VLPKMGITATVIDP---A-----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 269 ~l~~~Gi~v~~vd~---~-----d~e~Le~al~~--~~tklV~lesP~NPtG~i~dl~---~Ia~la~~~gi~lIvDea~ 335 (541)
.++..|.++..++. + |+++|++++++ .++++|++++|+||||.+++.+ +|+++|+++|+++|+|++|
T Consensus 165 ~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay 244 (448)
T 3meb_A 165 VFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAY 244 (448)
T ss_dssp HHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred hHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 23356777666653 3 78999998873 2478999999999999999855 5999999999999999998
Q ss_pred CCCCccc------cc----ccC-CcEEEECCccccCCCCCceEEEE--Ee---------Ch----HHHHHHHHHhhhcCC
Q 009167 336 ATPLNQK------AL----SLG-ADLVLHSATKFIGGHNDVLAGSI--SG---------SG----KLVTQIRNLHHVLGG 389 (541)
Q Consensus 336 a~~~~~~------~~----~~g-aDivv~S~sK~lgg~gd~~gG~l--v~---------~~----~li~~l~~~~~~~G~ 389 (541)
....... .. ..+ ..+++.|+||.+|..|. ..|++ ++ ++ ++++.+....+....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 323 (448)
T 3meb_A 245 QGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGE-RIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWS 323 (448)
T ss_dssp TTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGG-CCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred ccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccc-cceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccC
Confidence 7543221 01 122 34779999999986663 35665 54 34 455555554443333
Q ss_pred CchHHHHHHHHHhH----------HHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 390 ALNPNAAYLIIRGM----------KTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 390 ~~s~~~a~l~l~~l----------~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
..+...++.+...+ +.+....++..++++.+.+.|+++
T Consensus 324 ~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 324 MSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp SCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444444333332 223444455666777788888765
No 171
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.87 E-value=1.4e-20 Score=202.06 Aligned_cols=284 Identities=12% Similarity=0.108 Sum_probs=185.8
Q ss_pred hHHHHHHHHHHHhCCCc-EEEeCCHH-HHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----
Q 009167 211 TTVVVEEKMSALEGAES-TVIMASGM-SASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e~-~i~~sSGs-~Ai~~al~all~--pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
..+++++++|+++|.+. ++++++|+ .++.+++.++.. +|++||++.++|.+.... ++..|++++.++.
T Consensus 134 ~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~----~~~~G~~~~~v~~~~~~ 209 (456)
T 2z67_A 134 LTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKA----VSFVGMNMRLVETVLDG 209 (456)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH----HHHTTCEEEEECCEEET
T ss_pred HHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHH----HHHcCCCceEEEEeccC
Confidence 45678999999999864 66777778 566656665433 778899999999885533 3446888877764
Q ss_pred ----CCHHHHHHhc-cC---CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc-cccc---cc--CC
Q 009167 283 ----ADMEGLEAAL-NN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKAL---SL--GA 348 (541)
Q Consensus 283 ----~d~e~Le~al-~~---~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~-~~~~---~~--ga 348 (541)
.|+++|++++ ++ .++.+|++++|+||||.+.|+++|+++|+++|+++|+|++|+.... ..+. .. ++
T Consensus 210 ~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~ 289 (456)
T 2z67_A 210 DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRV 289 (456)
T ss_dssp TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCC
T ss_pred CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCC
Confidence 3899999999 42 2588898999999999999999999999999999999999876542 1111 12 79
Q ss_pred cEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCC--chHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHH
Q 009167 349 DLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGM--KTLHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 349 Divv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~--~s~~~a~l~l~~l--~tl~~r~~~~~~~a~~la~~ 423 (541)
|+++.|+||+++++. .+|+++. ++++++.+... ..|.. ......+.++..+ +.+..+.++..++++++.+.
T Consensus 290 D~~~~s~hK~~~~p~--g~G~l~~~~~~~~~~l~~~--~~g~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~ 365 (456)
T 2z67_A 290 DAVVSSSDKNLLTPI--GGGLVYSTDAEFIKEISLS--YPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDEL 365 (456)
T ss_dssp SEEEEEHHHHHCCCS--SCEEEEESCHHHHHHHHTT--SCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCCcCCCC--CeEEEEEcCHHHHhhcCcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999866543 2688888 56777776432 22322 1223333333332 33455666777888888888
Q ss_pred HHhCC---CceEEeCCCCCCCchhhhHhhhccCcccEEEEEE--cCCHHHHHHHHHHccCcCe---ecc--cCCcccccc
Q 009167 424 LEAHP---KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV--DGDLTATIKFIDALKIPYI---APS--FGGCESIVD 493 (541)
Q Consensus 424 L~~~p---~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l--~~~~~~~~~~l~~L~~~~i---avS--~G~~~sl~~ 493 (541)
|++.+ ++ .+..| . ++++|.+ ++. ...+.+.|...++ .+. .| .+.
T Consensus 366 L~~~~~~~g~-~v~~~-----------------~-~~v~~~~~~~~~---~~~l~~~L~~~gi~~~rv~~~~g-~f~--- 419 (456)
T 2z67_A 366 LNDLSKKTGG-KFLDV-----------------E-SPIASCISVNSD---PVEIAAKLYNLRVTGPRGIKKTD-HFG--- 419 (456)
T ss_dssp HHHHHHHSSC-CBCCC-----------------C-CSSEEEEECSSC---HHHHHHHHHHTTEESCEEECTTC-HHH---
T ss_pred HHhcccccCC-EecCC-----------------C-CeEEEEEecccH---HHHHHHHHHHcCCCcceEEeecC-ccc---
Confidence 88763 32 12111 1 3566776 432 2233444432232 111 00 000
Q ss_pred cCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009167 494 QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 494 ~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~i 541 (541)
..|.. -...++||+|++..++++.++.+.++|+++
T Consensus 420 ----G~~~~---------~~~~~~vr~s~~~~~t~eeid~~l~~L~~~ 454 (456)
T 2z67_A 420 ----NCYLG---------TYTHDYIVMNAAIGVRTEDIVNSVSKLEKI 454 (456)
T ss_dssp ----HTCSS---------CCSCCEEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred ----ccccc---------ccCcchhhhhhhcCCCHHHHHHHHHHHHHH
Confidence 00100 012478999999988888888888888753
No 172
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.87 E-value=3.2e-21 Score=201.77 Aligned_cols=291 Identities=15% Similarity=0.099 Sum_probs=185.4
Q ss_pred chhHHHHH----HHHHHHhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCC--eEEEEeC
Q 009167 209 NPTTVVVE----EKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG--ITATVID 281 (541)
Q Consensus 209 ~p~~~~Le----~~LA~l~g~e~~-i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~G--i~v~~vd 281 (541)
++...+++ +++++++|.+.. +++++|++|+.+++.+++++||+|+++.+.|+++.... ..+...| +++..++
T Consensus 64 ~~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~ 142 (405)
T 2vi8_A 64 CEYVDIVEELARERAKQLFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHG-SPVNFSGVQYNFVAYG 142 (405)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTT-CTTSHHHHHSEEEEEC
T ss_pred chHHHHHHHHHHHHHHHHhCCCceEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhccc-chhhhccceeEEEecc
Confidence 45555555 699999998765 45789999999999999999999999999998753210 0011112 2555554
Q ss_pred C------CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc---ccccc-cCCcEE
Q 009167 282 P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---QKALS-LGADLV 351 (541)
Q Consensus 282 ~------~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~---~~~~~-~gaDiv 351 (541)
. .|+++|++++++.++++|++ +|+|. |...++++|.++|+++|++||+|++|+.+.. ..... .+.|++
T Consensus 143 ~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~ 220 (405)
T 2vi8_A 143 VDPETHVIDYDDVREKARLHRPKLIVA-AAAAY-PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFV 220 (405)
T ss_dssp BCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEE
T ss_pred cccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-CccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEE
Confidence 2 37999999987524888888 55553 5677899999999999999999999873211 11111 157999
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcC-CCchHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHH
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAKILE 425 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G-~~~s~~~a~l~l~~l~-----tl~~r~~~~~~~a~~la~~L~ 425 (541)
+.|+||+++|+. ||++++++++++.++.....+. ++.++.....+...++ .+....++..++++++.+.|+
T Consensus 221 ~~s~sK~~~g~~---gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 297 (405)
T 2vi8_A 221 TTTTHKTLRGPR---GGMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQ 297 (405)
T ss_dssp EEESSSTTCCCS---CEEEEECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccccCCCCC---CeEEEEcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999998543 4999999888888776542221 2222322222222222 334556666778888888888
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCH
Q 009167 426 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 505 (541)
Q Consensus 426 ~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~ 505 (541)
+. ++. +..|. +.++++++.++........+.+.|...++.+..|.. |. |. ..
T Consensus 298 ~~-g~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~------~~---~~-~~- 349 (405)
T 2vi8_A 298 NE-GFT-LVSGG---------------TDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTI------PY---DP-ES- 349 (405)
T ss_dssp HT-TCE-EGGGS---------------CSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECC------TT---CS-SC-
T ss_pred hC-CCe-EecCC---------------CCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcC------cc---cc-CC-
Confidence 76 432 22221 146788999863111234555566556777776642 10 00 00
Q ss_pred HHHHhcCCCCCeEEEEecC--------CCHHHHHHHHHHHHh
Q 009167 506 SERLKYGIMDNLVRFSFGV--------EDFEDLKADVLQALH 539 (541)
Q Consensus 506 ~~~~~~gi~~~~IRlSvG~--------e~~edli~dL~~AL~ 539 (541)
...++.+|||++. ++.+.+++.|.++++
T Consensus 350 ------~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~ 385 (405)
T 2vi8_A 350 ------PFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLK 385 (405)
T ss_dssp ------TTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred ------CCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHh
Confidence 0124679999994 344555666665554
No 173
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.87 E-value=1.9e-20 Score=199.88 Aligned_cols=209 Identities=20% Similarity=0.197 Sum_probs=149.4
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCC-cchHHHHHhhcccCCeEEEEeCC----
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCY-RKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y-~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
.++...+||++||+++|.++++++++|++|+.+++.+++++|| +++.++| +.+.. .+...|.++..++.
T Consensus 73 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~----~~~~~G~~~~~v~~~~~~ 146 (456)
T 2ez2_A 73 GSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRY----HQEKNGAVFVDIVRDEAH 146 (456)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHH----HHHHTTCEEEECBCGGGG
T ss_pred cChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHH----HHHHcCCEEEEecccccc
Confidence 4678899999999999999999999999999999999999999 6778888 44332 23445777777643
Q ss_pred -----------CCHHHHHHhccCC---CceEEEEeCCCC-CCCcccc---HHHHHHHHHhCCCEEEEeCCCCCC------
Q 009167 283 -----------ADMEGLEAALNNN---NVSLFFTESPTN-PFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP------ 338 (541)
Q Consensus 283 -----------~d~e~Le~al~~~---~tklV~lesP~N-PtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~------ 338 (541)
.|+++|+++++++ ++++|++++|+| |||.++| +++|.++|++||++||+|++|+.+
T Consensus 147 ~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~ 226 (456)
T 2ez2_A 147 DAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIK 226 (456)
T ss_dssp CTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEcccccccccccc
Confidence 2789999998753 138999999999 9999987 899999999999999999997652
Q ss_pred -----Ccccc-------cccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhc-C-----C-CchHHHHHH
Q 009167 339 -----LNQKA-------LSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVL-G-----G-ALNPNAAYL 398 (541)
Q Consensus 339 -----~~~~~-------~~~gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~-G-----~-~~s~~~a~l 398 (541)
+.... .....|+++.|++|+++ .+ ++|++++ ++++++.++...... | + ......+ +
T Consensus 227 ~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~-~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~ 302 (456)
T 2ez2_A 227 EQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCL-VN--IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEA-M 302 (456)
T ss_dssp HHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTC-CS--SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHH-H
T ss_pred ccccccCCcchhhhhhhhcccCCEEEEeCcccCC-CC--ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHH-H
Confidence 11111 12346888889889866 33 3799988 678888776543321 1 1 1112211 1
Q ss_pred HHHhHHHH-HHHHHHHHHHHHHHHHHHHh
Q 009167 399 IIRGMKTL-HLRVQQQNSTALRMAKILEA 426 (541)
Q Consensus 399 ~l~~l~tl-~~r~~~~~~~a~~la~~L~~ 426 (541)
+...++.+ ....++..++.+.+.+.|++
T Consensus 303 a~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (456)
T 2ez2_A 303 AIGLREAMQYEYIEHRVKQVRYLGDKLKA 331 (456)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 22222333 34455556667777777776
No 174
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.87 E-value=1.1e-20 Score=202.13 Aligned_cols=296 Identities=17% Similarity=0.169 Sum_probs=184.5
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc----CCCE---EEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP----AGGH---IVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~----pGd~---Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
..+...+|+++|++++|.+++++++||++|+.+++.++++ +||+ |+++.+.|..+...+ ...|.++..+
T Consensus 74 ~~~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~----~~~g~~~~~~ 149 (467)
T 1ax4_A 74 GSRNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHV----ELNGCKAINI 149 (467)
T ss_dssp SCHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHH----HHTTCEEEEC
T ss_pred cCccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHH----hccCCceecc
Confidence 3567889999999999998899999999999999999988 9998 988844444433222 2335555433
Q ss_pred C---------------CCCHHHHHHhccC---CCceEEEEeCCCCCC-Ccccc---HHHHHHHHHhCCCEEEEeCCCCC-
Q 009167 281 D---------------PADMEGLEAALNN---NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT- 337 (541)
Q Consensus 281 d---------------~~d~e~Le~al~~---~~tklV~lesP~NPt-G~i~d---l~~Ia~la~~~gi~lIvDea~a~- 337 (541)
+ ..|+++|++++++ .++++|++++|+||+ |.+++ +++|+++|++||++||+|+++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~ 229 (467)
T 1ax4_A 150 VTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCE 229 (467)
T ss_dssp BCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHH
T ss_pred cccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhh
Confidence 1 1378999999974 148999999999999 78766 67899999999999999998542
Q ss_pred ----------CC-cccccc------cCCcEEEECCccccCCCCCceEEEEEeC-h-HHHHHHHHHhhhcCC-----CchH
Q 009167 338 ----------PL-NQKALS------LGADLVLHSATKFIGGHNDVLAGSISGS-G-KLVTQIRNLHHVLGG-----ALNP 393 (541)
Q Consensus 338 ----------~~-~~~~~~------~gaDivv~S~sK~lgg~gd~~gG~lv~~-~-~li~~l~~~~~~~G~-----~~s~ 393 (541)
.. ...... ..+|+++.|+||.++.+ +||+++++ + ++++.+......+++ ..+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (467)
T 1ax4_A 230 NAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLN---IGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAG 306 (467)
T ss_dssp HHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCS---SCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCH
T ss_pred cchhccccccccCCCchhhhhhhhccccceEEEeccccCCCC---cceEEEeCCHHHHHHHHHhhccccccccccCCccc
Confidence 11 111111 24789999999998754 36888887 7 888877654332111 1122
Q ss_pred HHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEE-------EcC
Q 009167 394 NAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE-------VDG 464 (541)
Q Consensus 394 ~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~-------l~~ 464 (541)
.....+..+++... .++++..++.+.+.+.|++ +++. +..|. .|..+++. ++.
T Consensus 307 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~ 368 (467)
T 1ax4_A 307 RDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLRE-AGIP-IQYPT----------------GGHAVFVDCKKLVPQIPG 368 (467)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH-TTCC-BCSSC----------------CSSEEEEESTTTCTTSCG
T ss_pred hHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh-CCCC-cccCC----------------CceEEEEehhhhcccccc
Confidence 11111111333221 2444555677788888876 3332 11121 35567777 432
Q ss_pred CHHHHHHHHHHc-cCcCeeccc-CCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009167 465 DLTATIKFIDAL-KIPYIAPSF-GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALH 539 (541)
Q Consensus 465 ~~~~~~~~l~~L-~~~~iavS~-G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e-~~edli~dL~~AL~ 539 (541)
.......+.+.| ...++.++. |..+.- ..|. + .. ......+.||||++.. .+++.++.+.++|+
T Consensus 369 ~~~~~~~l~~~L~~~~gv~v~~~g~~~~~-~~~~---~-g~------~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~ 435 (467)
T 1ax4_A 369 DQFPAQAVINALYLESGVRAVEIGSFLLG-RDPA---T-GE------QKHADMEFMRLTIARRVYTNDHMDYIADALI 435 (467)
T ss_dssp GGCHHHHHHHHHHHHHCEECEEESHHHHC-BCTT---T-CS------BCCCSCCEEEEECCTTSSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcCceeeecCccccc-cccc---c-cc------ccccccceEEEecccccCCHHHHHHHHHHHH
Confidence 112355677777 666887776 432100 0000 0 00 0001247999999843 44444555555544
No 175
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.86 E-value=1.7e-20 Score=198.67 Aligned_cols=283 Identities=12% Similarity=0.023 Sum_probs=180.0
Q ss_pred CCCCchhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhcc-CCCEEEEcCCCCcchHHHHHhh----------c
Q 009167 205 GRYGNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETV----------L 270 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e---~~i~~sSGs~Ai~~al~all~-pGd~Vlv~~~~y~~~~~~~~~~----------l 270 (541)
.+|.++...+++++|++++|.+ +++++++|++|+.++++.+.. +||+|++.++.|++........ .
T Consensus 81 ~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~ 160 (419)
T 2eo5_A 81 NDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIV 160 (419)
T ss_dssp SCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSS
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCcccccccc
Confidence 4678888999999999999863 567777888999999986543 4999999999998743322111 1
Q ss_pred ccCCeEEEEeCCC---------------------CHHHHH-HhccC----CCceEEEEeCCCCCCCcccc----HHHHHH
Q 009167 271 PKMGITATVIDPA---------------------DMEGLE-AALNN----NNVSLFFTESPTNPFLRCVD----VKLVSD 320 (541)
Q Consensus 271 ~~~Gi~v~~vd~~---------------------d~e~Le-~al~~----~~tklV~lesP~NPtG~i~d----l~~Ia~ 320 (541)
......+..++.. |+++|+ +++++ .++++|+++..+||||.+++ +++|.+
T Consensus 161 ~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~ 240 (419)
T 2eo5_A 161 GPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQK 240 (419)
T ss_dssp CCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHH
T ss_pred CCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHH
Confidence 1111234444432 367888 88862 24778877655678898777 999999
Q ss_pred HHHhCCCEEEEeCCCCCCC-c-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHH
Q 009167 321 LCHKKGAIVCIDGTFATPL-N-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 394 (541)
Q Consensus 321 la~~~gi~lIvDea~a~~~-~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~ 394 (541)
+|++||++||+||+|.... . ........|++ |++|.+++ |-...|+++++++++ .+ ..........++.
T Consensus 241 l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~-G~~riG~~~~~~~~~-~~-~~~~~~t~~~n~~ 315 (419)
T 2eo5_A 241 LAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALGG-GIMPIGATIFRKDLD-FK-PGMHSNTFGGNAL 315 (419)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TTSCCEEEEEEGGGC-CC-------CCCCCHH
T ss_pred HHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE--EecccccC-CccceEEEEEchHhh-cC-CcccCCCCCCCHH
Confidence 9999999999999986421 1 12223345766 68899986 313568888888877 55 2111122234566
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHH
Q 009167 395 AAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 474 (541)
Q Consensus 395 ~a~l~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~ 474 (541)
.+..+...++.+....++..++.+.+.+.|++. +..+ ++.|+++++++.+...... +.+
T Consensus 316 ~~~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~--~~~~------------------~~~g~~~~i~~~~~~~~~~-~~~ 374 (419)
T 2eo5_A 316 ACAIGSKVIDIVKDLLPHVNEIGKIFAEELQGL--ADDV------------------RGIGLAWGLEYNEKKVRDR-IIG 374 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--SSEE------------------EEETTEEEEECSCHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhe------------------EeeeEEEEEEEecCccHHH-HHH
Confidence 666666666655444555556777777777653 1111 2357899999842222345 777
Q ss_pred HccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH----HHHHHHHHHHHhh
Q 009167 475 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF----EDLKADVLQALHA 540 (541)
Q Consensus 475 ~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~----edli~dL~~AL~~ 540 (541)
.|...++.++.++ ++.|||+++...+ +.+++.|.+++++
T Consensus 375 ~l~~~Gv~v~~~~---------------------------~~~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 375 ESFKRGLLLLPAG---------------------------RSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp HHHHTTEECEEET---------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEecCC---------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 7655566554321 4689998875444 4444555555443
No 176
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.86 E-value=9.3e-21 Score=204.37 Aligned_cols=211 Identities=17% Similarity=0.164 Sum_probs=152.7
Q ss_pred hHHHHHHHHHHHhCCCcEEEe-CCHHHHHHHHHHHh----ccCCC-----EEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 211 TTVVVEEKMSALEGAESTVIM-ASGMSASTVMLLAL----VPAGG-----HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e~~i~~-sSGs~Ai~~al~al----l~pGd-----~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
..+++++.+++++|.+..+++ ++|++|+.+++.++ .++|| +|+++.+.|+.+... +...|++++.+
T Consensus 108 l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~----~~~~G~~vv~v 183 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPAT----ASMAGYQVREI 183 (474)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHH----HHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHH----HHHCCCEEEEe
Confidence 467889999999998766544 67778988766554 36888 999999999876643 34568888888
Q ss_pred CCC-----CHHHHHHhccCCCceEEEEeCCCCCCCcc-ccHHHHHHHHHhCCCEEEEeCCCCCCC--cccccccCCcEEE
Q 009167 281 DPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVL 352 (541)
Q Consensus 281 d~~-----d~e~Le~al~~~~tklV~lesP~NPtG~i-~dl~~Ia~la~~~gi~lIvDea~a~~~--~~~~~~~gaDivv 352 (541)
+.+ |+++|++++++ ++++|++++| ||+|.+ .|+++|+++|+++|+++|+|++|+.+. ..++..+|+|+++
T Consensus 184 ~~~~~~~~d~~~L~~~i~~-~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~ 261 (474)
T 1wyu_B 184 PSGPEGEVDLEALKRELGP-HVAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVH 261 (474)
T ss_dssp CBCTTSSBCHHHHHHHCST-TEEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEE
T ss_pred cCCCCCCcCHHHHHHhhCC-CceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEE
Confidence 764 89999999987 4999999998 589998 699999999999999999999986433 2344556899999
Q ss_pred ECCccccCCC---CCceEEEEEeChHHHHHHHH-Hh------------------hhcCCCchHHHHHHHHHh-----HHH
Q 009167 353 HSATKFIGGH---NDVLAGSISGSGKLVTQIRN-LH------------------HVLGGALNPNAAYLIIRG-----MKT 405 (541)
Q Consensus 353 ~S~sK~lgg~---gd~~gG~lv~~~~li~~l~~-~~------------------~~~G~~~s~~~a~l~l~~-----l~t 405 (541)
.|+||+++++ |+..+|++++++++++.+.. .. +......+...+..+... .+.
T Consensus 262 ~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~ 341 (474)
T 1wyu_B 262 LNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEG 341 (474)
T ss_dssp CCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHH
Confidence 9999998754 22346899998887765541 00 000011223222222222 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC
Q 009167 406 LHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 406 l~~r~~~~~~~a~~la~~L~~~ 427 (541)
+....++..++++++.+.|++.
T Consensus 342 l~~~~~~~~~~~~~l~~~L~~~ 363 (474)
T 1wyu_B 342 LKKAAALAVLNARYLKELLKEK 363 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhhc
Confidence 4555666778888888888875
No 177
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.86 E-value=3e-20 Score=195.47 Aligned_cols=250 Identities=17% Similarity=0.159 Sum_probs=156.5
Q ss_pred HHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHh-hcccCCeEEEEeCCC------CH
Q 009167 214 VVEEKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVIDPA------DM 285 (541)
Q Consensus 214 ~Le~~LA~l~g~e~~-i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~-~l~~~Gi~v~~vd~~------d~ 285 (541)
..++.+++++|.+.. +++++|++|+..++.+++++||+|+++.++|++....... .....++.+..++.+ |+
T Consensus 82 ~a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~ 161 (425)
T 3ecd_A 82 LAIERVKRLFNAGHANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDY 161 (425)
T ss_dssp HHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCH
T ss_pred HHHHHHHHHhCCCCceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCH
Confidence 345889999998776 4589999999999999999999999999999873211111 122223454455433 89
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-----cccccccCCcEEEECCccccC
Q 009167 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKALSLGADLVLHSATKFIG 360 (541)
Q Consensus 286 e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-----~~~~~~~gaDivv~S~sK~lg 360 (541)
++|++++++.++++|++++|+|| ...++++|.++|++||++||+|+++..+. ...... .+|+++.|+||+++
T Consensus 162 ~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~ 238 (425)
T 3ecd_A 162 DQVEALAQQHKPSLIIAGFSAYP--RKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVE-HAHVVTSTTHKTLR 238 (425)
T ss_dssp HHHHHHHHHHCCSEEEEECSCCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEESSGGGC
T ss_pred HHHHHHHhhcCCcEEEEccccCC--CcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchh-cCcEEEecCCcccC
Confidence 99999996325899999999985 57789999999999999999999954322 122233 37999999999996
Q ss_pred CCCCceEEEEEeC-hHHHHHHHHHhhh--cCCCchHHHHHH--HH-HhH-HHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Q 009167 361 GHNDVLAGSISGS-GKLVTQIRNLHHV--LGGALNPNAAYL--II-RGM-KTLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (541)
Q Consensus 361 g~gd~~gG~lv~~-~~li~~l~~~~~~--~G~~~s~~~a~l--~l-~~l-~tl~~r~~~~~~~a~~la~~L~~~p~v~~v 433 (541)
|+ .+|+++++ +++.+.+...... .+....+..+.+ ++ ..+ +.+....++..++.+.+.+.|.+. ++. +
T Consensus 239 g~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~ 313 (425)
T 3ecd_A 239 GP---RGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVD-L 313 (425)
T ss_dssp CC---SCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E
T ss_pred CC---CcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCe-e
Confidence 65 36898887 5666666553322 112222222211 11 111 334455666777888888888773 232 2
Q ss_pred eCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccC
Q 009167 434 HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 434 ~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G 486 (541)
..|. +.++++++.++........+.+.|...++.+..+
T Consensus 314 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~ 351 (425)
T 3ecd_A 314 VTGG---------------TDNHLLLVDLRPKGLKGAQVEQALERAGITCNKN 351 (425)
T ss_dssp GGGS---------------CSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEC
T ss_pred ccCC---------------CCceEEEEEeCCCCCCHHHHHHHHHHcCCEeccc
Confidence 1111 1466888888631112344455555557766643
No 178
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.86 E-value=4.6e-21 Score=207.43 Aligned_cols=210 Identities=16% Similarity=0.120 Sum_probs=145.0
Q ss_pred HHHHHHHHHhCCC-----cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHh----hcccCC--eEEEEe--
Q 009167 214 VVEEKMSALEGAE-----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET----VLPKMG--ITATVI-- 280 (541)
Q Consensus 214 ~Le~~LA~l~g~e-----~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~----~l~~~G--i~v~~v-- 280 (541)
.+++++++++|.+ ..|+++||++|+.+++.++++|||+|+++++.|++....... .....| +.+..+
T Consensus 94 ~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~ 173 (483)
T 1rv3_A 94 LCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKV 173 (483)
T ss_dssp HHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECB
T ss_pred HHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcc
Confidence 4458999999985 248999999999988999999999999999999885421100 011112 344444
Q ss_pred C----CCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-----cccccccCCcEE
Q 009167 281 D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKALSLGADLV 351 (541)
Q Consensus 281 d----~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-----~~~~~~~gaDiv 351 (541)
+ ..|+++|++++++.++|+|++ +++|++ .+.|+++|.++|+++|++||+|+++..+. ...++. ++|++
T Consensus 174 ~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~-~~div 250 (483)
T 1rv3_A 174 NPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-HCHVV 250 (483)
T ss_dssp CTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-TCSEE
T ss_pred ccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-CCcEE
Confidence 3 138999999997225999999 999999 99999999999999999999999976322 122333 68999
Q ss_pred EECCccccCCCCCceEEEEEeChH---------------HHHHHHHHh-h-hcCCCchH-HHH-HHHHHhH--HHHHHHH
Q 009167 352 LHSATKFIGGHNDVLAGSISGSGK---------------LVTQIRNLH-H-VLGGALNP-NAA-YLIIRGM--KTLHLRV 410 (541)
Q Consensus 352 v~S~sK~lgg~gd~~gG~lv~~~~---------------li~~l~~~~-~-~~G~~~s~-~~a-~l~l~~l--~tl~~r~ 410 (541)
+.|+||+++|+. +|+++++++ +.+.+.... . ..|+.... ..+ ..++..+ ..+..+.
T Consensus 251 ~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~ 327 (483)
T 1rv3_A 251 TTTTHKTLRGCR---AGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQ 327 (483)
T ss_dssp EEESSGGGCCCS---CEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred EecCcccCCCCC---ceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHH
Confidence 999999997664 688888764 334443321 1 12222222 111 1122222 2345666
Q ss_pred HHHHHHHHHHHHHHHhCCCc
Q 009167 411 QQQNSTALRMAKILEAHPKV 430 (541)
Q Consensus 411 ~~~~~~a~~la~~L~~~p~v 430 (541)
++..++++.+.+.|.++ ++
T Consensus 328 ~~~~~~~~~l~~~L~~~-g~ 346 (483)
T 1rv3_A 328 RQVVANCRALSAALVEL-GY 346 (483)
T ss_dssp HHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHHHHHhc-CC
Confidence 77778999999999886 44
No 179
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.86 E-value=4.9e-20 Score=196.59 Aligned_cols=260 Identities=14% Similarity=0.152 Sum_probs=168.3
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHH-HHHhhcc---
Q 009167 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRI-FIETVLP--- 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~--------pGd~Vlv~~~~y~~~~~-~~~~~l~--- 271 (541)
++..+...+++++|+++++. +.+++++||++|+.++++.+.. +||+||+.++.|++... .+. ...
T Consensus 89 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~-~~g~~~ 167 (449)
T 3a8u_X 89 QYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTS-LGGVNG 167 (449)
T ss_dssp SCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHH-HCCCHH
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhh-ccCChh
Confidence 67778889999999999964 5678888899999999987754 78999999999987532 221 111
Q ss_pred --------cCCeEEEEeCC--------CC--------HHHHHHhccC---CCceEEEEeCCCCCCCcccc----HHHHHH
Q 009167 272 --------KMGITATVIDP--------AD--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSD 320 (541)
Q Consensus 272 --------~~Gi~v~~vd~--------~d--------~e~Le~al~~---~~tklV~lesP~NPtG~i~d----l~~Ia~ 320 (541)
..++....++. .| +++|++++++ .++++|+++..+|++|.+++ +++|.+
T Consensus 168 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~ 247 (449)
T 3a8u_X 168 NRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNRE 247 (449)
T ss_dssp HHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHH
T ss_pred hccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHH
Confidence 01333332221 15 8999998862 24788888766688999888 999999
Q ss_pred HHHhCCCEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-------hc
Q 009167 321 LCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VL 387 (541)
Q Consensus 321 la~~~gi~lIvDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-------~~ 387 (541)
+|++||++||+||++... .. ........|++ |++|.+++ |....|++++++++++.+..... ..
T Consensus 248 l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~ 324 (449)
T 3a8u_X 248 ICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVTN-GAIPMGAVIASTEIYQTFMNQPTPEYAVEFPH 324 (449)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCC
T ss_pred HHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEcccccC-CCCceEEEEECHHHHHHhhccCcccccccccc
Confidence 999999999999998532 11 12223346766 67899986 31346778888888888765311 11
Q ss_pred C--CCchHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 388 G--GALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 388 G--~~~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
+ ...++..+..+...++.+.. ..++..++.+.+.+.|++.+.. |.. ...++.|.+++++++
T Consensus 325 ~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~-----~~~----------~~~~~~g~~~~i~~~ 389 (449)
T 3a8u_X 325 GYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGA-----KNV----------IDIRNFGLAGAIQIA 389 (449)
T ss_dssp CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTS-----TTE----------EEEEEETTEEEEEEC
T ss_pred cCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC-----CCe----------EEEeeeEEEEEEEEe
Confidence 2 23456666555556654432 3455556677777777653211 110 011235789999997
Q ss_pred CCH--H--HHHHHHHHccCcCeecc
Q 009167 464 GDL--T--ATIKFIDALKIPYIAPS 484 (541)
Q Consensus 464 ~~~--~--~~~~~l~~L~~~~iavS 484 (541)
... . ....+.+.|...++.++
T Consensus 390 ~~~~~~~~~~~~~~~~l~~~Gv~v~ 414 (449)
T 3a8u_X 390 PRDGDAIVRPFEAGMALWKAGFYVR 414 (449)
T ss_dssp CBTTBSSHHHHHHHHHHHHHTEECE
T ss_pred cCcccccccHHHHHHHHHHCCcEEe
Confidence 431 1 22245555554465443
No 180
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.86 E-value=2.5e-20 Score=194.64 Aligned_cols=213 Identities=12% Similarity=0.052 Sum_probs=144.4
Q ss_pred hhHHHHHHHHHHHhCC--------C--cEEEeCCHHHHHHHHH--HHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEE
Q 009167 210 PTTVVVEEKMSALEGA--------E--STVIMASGMSASTVML--LALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~--------e--~~i~~sSGs~Ai~~al--~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v 277 (541)
....+++++++++++. + +.+++++|++|+.+++ .+++++||+|+++.|+|.+.... ++..|.++
T Consensus 70 ~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~----~~~~g~~~ 145 (397)
T 3fsl_A 70 EGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAI----FAGAGFEV 145 (397)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHH----HHHTTCCE
T ss_pred CchHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHH----HHHcCCce
Confidence 4456888888888742 3 4455666679999984 56689999999999999886543 34467777
Q ss_pred EEeCC----C---CHHHHHHhccC--CCceEEEEeCCCCCCCccccH---HHHHHHHHhCCCEEEEeCCCCCCCcc----
Q 009167 278 TVIDP----A---DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 278 ~~vd~----~---d~e~Le~al~~--~~tklV~lesP~NPtG~i~dl---~~Ia~la~~~gi~lIvDea~a~~~~~---- 341 (541)
..++. . |+++|++++++ .++++|++++|+||||.+++. ++|+++|+++|+++|+|++|......
T Consensus 146 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 225 (397)
T 3fsl_A 146 STYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEED 225 (397)
T ss_dssp EEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGG
T ss_pred EEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccc
Confidence 77765 3 89999999973 248999999999999999774 48899999999999999998764421
Q ss_pred -cc-----cccCCcEEEECCccccCCCCCceEEEEEe---ChHHHHHHHHHh----hhcCCCchHHHHHHH---HHh---
Q 009167 342 -KA-----LSLGADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRNLH----HVLGGALNPNAAYLI---IRG--- 402 (541)
Q Consensus 342 -~~-----~~~gaDivv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~~~~----~~~G~~~s~~~a~l~---l~~--- 402 (541)
.. ...+.++++.|+||.++.+| ...|++++ ++++++.+.... .......+...+..+ +..
T Consensus 226 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 304 (397)
T 3fsl_A 226 AYAIRAIASAGLPALVSNSFSKIFSLYG-ERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEAL 304 (397)
T ss_dssp GHHHHHHHHTTCCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHH
T ss_pred cHHHHHHHhcCCCEEEEecccccccCcC-CCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHH
Confidence 11 12345689999999998555 34677753 456555443221 111112222222222 211
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 403 ----MKTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 403 ----l~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
.+.+..+.++..++++.+.+.|+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 333 (397)
T 3fsl_A 305 KASWLKEVEEMRTRILAMRQELVKVLSTE 333 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2234445556667778888888765
No 181
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.86 E-value=2e-20 Score=195.32 Aligned_cols=215 Identities=13% Similarity=0.087 Sum_probs=146.9
Q ss_pred CchhHHHHHHHHHHHh---C-----CCcEEE--eCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 208 GNPTTVVVEEKMSALE---G-----AESTVI--MASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~---g-----~e~~i~--~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
..+...+|+++||+++ + .+++++ +++|++|+.+++..+ +.+||+|+++.|+|++.... ++..|.
T Consensus 67 ~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~----~~~~g~ 142 (396)
T 2q7w_A 67 GIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSV----FNSAGL 142 (396)
T ss_dssp CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHH----HHHTTC
T ss_pred CCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHH----HHHcCC
Confidence 3455788999999987 2 245555 777779999998765 46999999999999986543 344577
Q ss_pred EEEEeCC---C----CHHHHHHhccCC--CceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc--
Q 009167 276 TATVIDP---A----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (541)
Q Consensus 276 ~v~~vd~---~----d~e~Le~al~~~--~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~-- 341 (541)
++..++. + |+++|++++++. +++++++++|+||||.+++ +++|+++|+++|+++|+||+|......
T Consensus 143 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 222 (396)
T 2q7w_A 143 EVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLE 222 (396)
T ss_dssp EEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHH
T ss_pred ceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcc
Confidence 7777765 3 799999998642 3788999999999999987 557999999999999999998764321
Q ss_pred -c--c---c-cc-CCcEEEECCccccCCCCCceEEEEEe---ChH----HHHHHHHHhhhcCCCchHHHHHHHHHhHH--
Q 009167 342 -K--A---L-SL-GADLVLHSATKFIGGHNDVLAGSISG---SGK----LVTQIRNLHHVLGGALNPNAAYLIIRGMK-- 404 (541)
Q Consensus 342 -~--~---~-~~-gaDivv~S~sK~lgg~gd~~gG~lv~---~~~----li~~l~~~~~~~G~~~s~~~a~l~l~~l~-- 404 (541)
. + + .. ..++++.|+||.++.+| ...|++++ +++ +++.+...........++..+..+...++
T Consensus 223 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 301 (396)
T 2q7w_A 223 EDAEGLRAFAAMHKELIVASSYSXNFGLYN-ERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSND 301 (396)
T ss_dssp HHTHHHHHHHHHCSCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSH
T ss_pred chhHHHHHHHhcCCcEEEEEeccccccccc-cccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcCh
Confidence 1 1 1 11 35688999999998555 34677775 553 44444432222222335554444444432
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHhC
Q 009167 405 --------TLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 405 --------tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
.+....++..++++.+.+.|+++
T Consensus 302 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (396)
T 2q7w_A 302 ALRAIWEQELTDMRQRIQRMRQLFVNTLQEK 332 (396)
T ss_dssp HHHHHHHHHHHHC-CHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22223344556677777888765
No 182
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.85 E-value=4.1e-20 Score=193.98 Aligned_cols=283 Identities=11% Similarity=0.008 Sum_probs=173.0
Q ss_pred hhHHHHHHHHHHHhCCC---cEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCH
Q 009167 210 PTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e---~~i~-~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~ 285 (541)
+..+++++++++++|.+ ++++ +++|++|+.+++.+++++| .+++....|........... .+|.++..++.++-
T Consensus 78 ~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~g 155 (398)
T 2fyf_A 78 NLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKN-PFVGEPIIITSDPG 155 (398)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHC-TTSCCCEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHh-CCCCceEEEecCCC
Confidence 35789999999999984 3455 6777899999999999887 23334444432111011111 12555555543210
Q ss_pred HHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccccccCCcEEEECCccccCCCCCc
Q 009167 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDV 365 (541)
Q Consensus 286 e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~~~~gaDivv~S~sK~lgg~gd~ 365 (541)
......+++ ++++|++++|+||||.+.|+++|.++ +|++||+|++++.+...-... ++|+++.|+||+++++++
T Consensus 156 ~~~~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~-~~di~~~s~sK~~~~~gg- 229 (398)
T 2fyf_A 156 SAPEPQTDP-SVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIA-ETDAYYFAPQKNFASDGG- 229 (398)
T ss_dssp CCCCCCCCT-TCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGG-GCSEEEECTTSTTCSCSS-
T ss_pred CCCCccccC-CCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcc-cCcEEEEecCcccCCCCc-
Confidence 000112454 58999999999999999999988877 899999999987653221122 489999999999998852
Q ss_pred eEEEEEeChHHHHHHHHHh----------------h-----hcCCCchHHHHHHHHHhHHH------HHHHHHHHHHHHH
Q 009167 366 LAGSISGSGKLVTQIRNLH----------------H-----VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (541)
Q Consensus 366 ~gG~lv~~~~li~~l~~~~----------------~-----~~G~~~s~~~a~l~l~~l~t------l~~r~~~~~~~a~ 418 (541)
.|+++++++++++++... . ....+.+....+.+...++. +..+.++..++++
T Consensus 230 -~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~ 308 (398)
T 2fyf_A 230 -LWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQ 308 (398)
T ss_dssp -EEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred -eEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 588889998888774321 0 01122333333333333332 3445566677888
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccc
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
++.+.|++.|++. +..+. |.. ..+.+++|.++.+ ....++.+.|...++.++.|..
T Consensus 309 ~l~~~L~~~~g~~-~~~~~----~~~--------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~g~~---------- 364 (398)
T 2fyf_A 309 RLYSWAQERPYTT-PFVTD----PGL--------RSQVVGTIDFVDD-VDAGTVAKILRANGIVDTEPYR---------- 364 (398)
T ss_dssp HHHHHHHHSTTEE-ESCCS----GGG--------BCSSEEEEEECTT-SCHHHHHHHHHHTTCBCCSCCT----------
T ss_pred HHHHHHHHcCCce-eccCC----hhh--------cCCcEEEEECCCC-CCHHHHHHHHHHCCcEEecCcc----------
Confidence 8889998876553 22111 110 0234899999632 2345566666555766654310
Q ss_pred cccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009167 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL 538 (541)
...++.||||++...+++.++.+.++|
T Consensus 365 -------------~~~~~~iRis~~~~~t~e~i~~~~~~l 391 (398)
T 2fyf_A 365 -------------KLGRNQLRVAMFPAVEPDDVSALTECV 391 (398)
T ss_dssp -------------TTCSSEEEEECCTTSCHHHHHHHHHHH
T ss_pred -------------cCCCCEEEEEecCCCCHHHHHHHHHHH
Confidence 012578999999654444444444444
No 183
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.85 E-value=3.2e-20 Score=195.37 Aligned_cols=214 Identities=11% Similarity=0.072 Sum_probs=145.2
Q ss_pred chhHHHHHHHHHHHh-C-------CCcEEE--eCCHHHHHHHHH--HHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE
Q 009167 209 NPTTVVVEEKMSALE-G-------AESTVI--MASGMSASTVML--LALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~-g-------~e~~i~--~sSGs~Ai~~al--~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
.....++++.+++++ + .+++++ +++|++|+.+++ ..++.+||+|+++.|+|++.... ++..|.+
T Consensus 72 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~----~~~~g~~ 147 (412)
T 1yaa_A 72 ITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAI----FENQGLK 147 (412)
T ss_dssp TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHH----HHTTTCC
T ss_pred CCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHH----HHHcCce
Confidence 445678999999988 3 245666 777789999883 45567999999999999986543 3445777
Q ss_pred EEEeCC-------CCHHHHHHhccCC--CceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc---
Q 009167 277 ATVIDP-------ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (541)
Q Consensus 277 v~~vd~-------~d~e~Le~al~~~--~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~--- 341 (541)
+..++. .|+++|++++++. ++.++++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 148 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~ 227 (412)
T 1yaa_A 148 TATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLD 227 (412)
T ss_dssp EEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHH
T ss_pred EEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccc
Confidence 766654 2789999988642 2455555999999999987 557889999999999999998653221
Q ss_pred -c--cc----ccC----CcEEEECCccccCCCCCceEEEEE--e-----ChH----HHHHHHHHhhhcCCCchHHHHHHH
Q 009167 342 -K--AL----SLG----ADLVLHSATKFIGGHNDVLAGSIS--G-----SGK----LVTQIRNLHHVLGGALNPNAAYLI 399 (541)
Q Consensus 342 -~--~~----~~g----aDivv~S~sK~lgg~gd~~gG~lv--~-----~~~----li~~l~~~~~~~G~~~s~~~a~l~ 399 (541)
. +. ..+ .++++.|+||.+++.| ...|+++ + +++ +++.+...........+.....++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-lriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~ 306 (412)
T 1yaa_A 228 KDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYG-ERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIV 306 (412)
T ss_dssp HHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGG-GCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred chhHHHHHHHhcCCCCcceEEEeccCCCCCCcC-CcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHH
Confidence 1 11 123 4688999999998766 3467877 6 555 667666533332233344444333
Q ss_pred HHhHH----------HHHHHHHHHHHHHHHHHHHHHhC
Q 009167 400 IRGMK----------TLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 400 l~~l~----------tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
...++ .+....++..++++.+.+.|+++
T Consensus 307 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (412)
T 1yaa_A 307 AKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKL 344 (412)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33333 23333445556677777777764
No 184
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.85 E-value=9.4e-20 Score=193.20 Aligned_cols=290 Identities=12% Similarity=0.100 Sum_probs=184.0
Q ss_pred CCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhhc----------
Q 009167 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL---------- 270 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~~~l---------- 270 (541)
..|.++...+++++|+++++. +.+++++||++|+..+++.+. ..+|+|++.++.|++.........
T Consensus 80 ~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 159 (433)
T 1zod_A 80 SEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGP 159 (433)
T ss_dssp TTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCC
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCC
Confidence 456778889999999999974 567778889999999998653 346899999999987432211110
Q ss_pred ccCCeEEEEeCC------C---------CHHHHHHhccC---CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCE
Q 009167 271 PKMGITATVIDP------A---------DMEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (541)
Q Consensus 271 ~~~Gi~v~~vd~------~---------d~e~Le~al~~---~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~ 328 (541)
...|+....++. . |+++|++++++ .++++|+++.++||+|.+++ +++|.++|++||++
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 239 (433)
T 1zod_A 160 AAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGML 239 (433)
T ss_dssp CCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCE
T ss_pred CCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCE
Confidence 012444332221 1 38899988862 35888888666689998776 99999999999999
Q ss_pred EEEeCCCCCCC-c-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCchHHHHHHHH
Q 009167 329 VCIDGTFATPL-N-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLII 400 (541)
Q Consensus 329 lIvDea~a~~~-~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~--~G~~~s~~~a~l~l 400 (541)
||+||+|.... . .+......|++ |++|.+++ | ...|++++++++++.+...... .....++..+..+.
T Consensus 240 li~DEv~~~~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G-~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~ 315 (433)
T 1zod_A 240 LILDEAQTGVGRTGTMFACQRDGVTPDIL--TLSKTLGA-G-LPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGL 315 (433)
T ss_dssp EEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECHHHHT-T-SSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHH
T ss_pred EEEeccccCCCcCchHhHHhhcCCCCCEE--EecccccC-C-CCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHH
Confidence 99999987421 1 11123345655 68899986 4 4578999999998888653211 11223555555555
Q ss_pred HhHHHHH--HHHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-------HH
Q 009167 401 RGMKTLH--LRVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LT 467 (541)
Q Consensus 401 ~~l~tl~--~r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-------~~ 467 (541)
..++.+. ...++..++.+.+.+.|++ +|.+..+ ++.|.+++++++.. ..
T Consensus 316 aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~------------------~~~g~~~~i~~~~~~~~~~~~~~ 377 (433)
T 1zod_A 316 RVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDV------------------RGRGLLLGVEIVKDRRTKEPADG 377 (433)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEEEEETTTTEECTT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EEEEEEEEEEEecCccccCCChH
Confidence 5554432 2334445556666666654 2332211 23578899988531 12
Q ss_pred HHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH----HHHHHHHHHHHh
Q 009167 468 ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF----EDLKADVLQALH 539 (541)
Q Consensus 468 ~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~----edli~dL~~AL~ 539 (541)
...++.+.|...++.+..|+.+ + .++.|||++....+ +..++.|.++++
T Consensus 378 ~~~~~~~~l~~~Gv~v~~~~~~----------------------~-~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~ 430 (433)
T 1zod_A 378 LGAKITRECMNLGLSMNIVQLP----------------------G-MGGVFRIAPPLTVSEDEIDLGLSLLGQAIE 430 (433)
T ss_dssp HHHHHHHHHHHTTEECCEECCT----------------------T-SCCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEeccCCC----------------------C-CCCEEEEECCcCCCHHHHHHHHHHHHHHHH
Confidence 3556777666567666654321 1 24789998765443 444455555544
No 185
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.85 E-value=4e-20 Score=195.61 Aligned_cols=213 Identities=12% Similarity=0.088 Sum_probs=143.1
Q ss_pred hhHHHHHHHHHHHhCC--------C--cEEEeCCHHHHHHHH--HHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEE
Q 009167 210 PTTVVVEEKMSALEGA--------E--STVIMASGMSASTVM--LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~--------e--~~i~~sSGs~Ai~~a--l~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v 277 (541)
....++++.++++++. + +++++++|++|+.++ +.+++.+||+|+++.|+|.+....+ +..|.++
T Consensus 92 ~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~----~~~g~~~ 167 (420)
T 4f4e_A 92 DGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALF----DMAGFEV 167 (420)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHH----HHTTCCE
T ss_pred CCcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHH----HHcCCeE
Confidence 3456788888887632 2 345556667999999 4567899999999999998865433 4457777
Q ss_pred EEeCC----C---CHHHHHHhccC--CCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCcc----
Q 009167 278 TVIDP----A---DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 278 ~~vd~----~---d~e~Le~al~~--~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~~---- 341 (541)
..++. . |+++|++++++ .++++|++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 168 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~ 247 (420)
T 4f4e_A 168 VAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEAD 247 (420)
T ss_dssp EEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGG
T ss_pred EEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchh
Confidence 76654 2 79999999972 24899999999999999987 558888999999999999998654321
Q ss_pred -cc-----cccCCcEEEECCccccCCCCCceEEEEEe---ChHHHHHHH----HHhhhcCCCchHHHHHHHHHhH-----
Q 009167 342 -KA-----LSLGADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIR----NLHHVLGGALNPNAAYLIIRGM----- 403 (541)
Q Consensus 342 -~~-----~~~gaDivv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~----~~~~~~G~~~s~~~a~l~l~~l----- 403 (541)
.. ...+.++++.|+||.++.+|. ..|+++. ++++++.+. ...+......+...+..+...+
T Consensus 248 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 326 (420)
T 4f4e_A 248 AAAVRLFAAANLNVFVSSSFSKSFSLYGE-RVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPEL 326 (420)
T ss_dssp GHHHHHHHHTTCCEEEEEECTTTTTCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHH
T ss_pred hHHHHHHHhcCCCEEEEEeCCccCcCcCC-CcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHH
Confidence 01 123567999999999986653 4677643 456555432 2221111222333332222222
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 404 -----KTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 404 -----~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
+.+....++..++++.+.+.|+++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 327 RASWVQELGEMRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 223444455567777888888775
No 186
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.85 E-value=2.2e-20 Score=199.81 Aligned_cols=209 Identities=20% Similarity=0.169 Sum_probs=148.0
Q ss_pred HHHH-HHHHHHhCCCcEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHh-hcccCCeEEEEeC------CC
Q 009167 213 VVVE-EKMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVID------PA 283 (541)
Q Consensus 213 ~~Le-~~LA~l~g~e~~i~-~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~-~l~~~Gi~v~~vd------~~ 283 (541)
+++. +++++++|.+...+ ++||++|+..++.+++++||+|+++.++|++....... .+...+..+..++ ..
T Consensus 93 e~~a~~~la~~~g~~~~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 172 (447)
T 3h7f_A 93 ENLARDRAKALFGAEFANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLI 172 (447)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSC
T ss_pred HHHHHHHHHHHcCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCc
Confidence 3444 99999999987766 89999999999999999999999999998772210000 0111123444443 24
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-----CcccccccCCcEEEECCccc
Q 009167 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADLVLHSATKF 358 (541)
Q Consensus 284 d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-----~~~~~~~~gaDivv~S~sK~ 358 (541)
|+++|++++++.++++|++++|+||++. ++++|.++|+++|++||+|+++..+ ....+. .++|+++.|+||+
T Consensus 173 d~~~l~~~i~~~~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~ 249 (447)
T 3h7f_A 173 DMDAVRATALEFRPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKT 249 (447)
T ss_dssp CHHHHHHHHHHHCCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGG
T ss_pred CHHHHHHHHHhcCCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcC
Confidence 8999999985434899999999998876 9999999999999999999996532 122233 2579999999999
Q ss_pred cCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCchHHHHH--HHHHh-H-HHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 359 IGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAY--LIIRG-M-KTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 359 lgg~gd~~gG~lv~~~~li~~l~~~~~--~~G~~~s~~~a~--l~l~~-l-~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
++|+ .+|++++++++++.+..... ..|+...+..+. .++.. . +.+..+.++..++++++.+.|++.
T Consensus 250 l~G~---~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 250 LGGG---RSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp GCCC---SCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred CCCC---CeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9865 47999999988888876433 233333322222 22211 1 244566777788889999888764
No 187
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.85 E-value=3.3e-20 Score=195.26 Aligned_cols=214 Identities=17% Similarity=0.173 Sum_probs=145.8
Q ss_pred chhHHHHHHHHHHHh-CCC-------cE--EEeCCHHHHHHHH---HHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 209 NPTTVVVEEKMSALE-GAE-------ST--VIMASGMSASTVM---LLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~-g~e-------~~--i~~sSGs~Ai~~a---l~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
.+...+|++++++++ |.+ +. +.+.+|++++.++ +.+++++||+|+++.|+|.+.... ++..|.
T Consensus 78 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~g~ 153 (409)
T 4eu1_A 78 VTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESI----FAKAGM 153 (409)
T ss_dssp TTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHH----HHHTTC
T ss_pred CCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHH----HHHcCC
Confidence 445678999999976 532 23 3466777777664 445678999999999999886544 344678
Q ss_pred EEEEeCC-------CCHHHHHHhcc--CCCceEEEEeCCCCCCCccccHH---HHHHHHHhCCCEEEEeCCCCCCCccc-
Q 009167 276 TATVIDP-------ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQK- 342 (541)
Q Consensus 276 ~v~~vd~-------~d~e~Le~al~--~~~tklV~lesP~NPtG~i~dl~---~Ia~la~~~gi~lIvDea~a~~~~~~- 342 (541)
++..++. .|+++|+++++ +.+++++++++|+||||.+++.+ +|+++|+++|+++|+||+|.......
T Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~ 233 (409)
T 4eu1_A 154 ELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQL 233 (409)
T ss_dssp EEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCH
T ss_pred eEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCc
Confidence 8877764 27899999985 22467788899999999999855 59999999999999999987643221
Q ss_pred -----c---c-c-cCCcEEEECCccccCCCCCceEEEE---EeChH----HHHHHHHHhhhcCCCchHHHHHHHHHhHH-
Q 009167 343 -----A---L-S-LGADLVLHSATKFIGGHNDVLAGSI---SGSGK----LVTQIRNLHHVLGGALNPNAAYLIIRGMK- 404 (541)
Q Consensus 343 -----~---~-~-~gaDivv~S~sK~lgg~gd~~gG~l---v~~~~----li~~l~~~~~~~G~~~s~~~a~l~l~~l~- 404 (541)
+ + . ....+++.|+||.+|.+|. ..|++ +++++ +++.++..........+...++++...++
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 312 (409)
T 4eu1_A 234 DYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGH-RCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKD 312 (409)
T ss_dssp HHHTHHHHHHHTTSSCCEEEEECTTTSSCGGG-CCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHhhCCcEEEEecCcccccCccC-CceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCC
Confidence 1 1 1 2334889999999986663 45774 56677 55555554433333334444444333333
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHhC
Q 009167 405 ---------TLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 405 ---------tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
.+....++..++++.+.+.|++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (409)
T 4eu1_A 313 PQLTALWKKELKQMSSRIAEVRKRLVSELKAC 344 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 23344455667777888888765
No 188
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.85 E-value=6.4e-21 Score=204.31 Aligned_cols=166 Identities=13% Similarity=0.134 Sum_probs=124.7
Q ss_pred CCccCCCCchhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEE
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
++....++.+...++++.+|+ +|.++.+++++|+ +|+.+++.+++++||+|++++++|.++...+.. .|.++.+
T Consensus 48 ~~d~~~~~~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~----~G~~~~~ 122 (446)
T 2x3l_A 48 GLDDLHHPEEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDI----SQQEGHF 122 (446)
T ss_dssp TSCCTTSCSSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHH----HTCCEEE
T ss_pred CCccccCcchHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHH----cCCeEEE
Confidence 344455677788999999999 9987777777775 999999999999999999999999987755432 3555555
Q ss_pred eCC--C---------CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-----cccc
Q 009167 280 IDP--A---------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-----NQKA 343 (541)
Q Consensus 280 vd~--~---------d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-----~~~~ 343 (541)
++. + |+++| +.+ ++++|++++| |++|.+.|+++|.++|+++|+++|+|++++..+ +...
T Consensus 123 v~~~~~~~~~~~~~~d~~~l---~~~-~~~~v~~~~~-n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~ 197 (446)
T 2x3l_A 123 IETHQSPLTNHYNKVNLSRL---NND-GHKLVVLTYP-NYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDST 197 (446)
T ss_dssp CEEEECTTTSSEEEEEC-----------CCEEEEESS-CTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCG
T ss_pred EeCeeccccCcCCCCCHHHH---cCC-CceEEEEECC-CCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCCh
Confidence 543 2 45555 344 4899999984 569999999999999999999999999987622 2334
Q ss_pred cccCCcEEEECCccccCCCCCceEEEEEeChHHHH
Q 009167 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT 378 (541)
Q Consensus 344 ~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~ 378 (541)
...++|+++.|+||+++++.. +|++++++++++
T Consensus 198 ~~~g~Di~~~S~~K~l~~~~g--~g~l~~~~~~i~ 230 (446)
T 2x3l_A 198 LNYQADYVVQSFHKTLPALTM--GSVLYIHKNAPY 230 (446)
T ss_dssp GGGTCSEEEECHHHHSSSCTT--CEEEEEETTCTT
T ss_pred HHcCCCEEEECCccccccccc--cEEEEEcCCcCC
Confidence 456899999999997765532 588888766543
No 189
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.85 E-value=1.4e-20 Score=200.37 Aligned_cols=269 Identities=12% Similarity=0.058 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHhC------C--CcEEEeCCHHHHHHHHHHHh--------ccCCCEEEEcCCCCcchHHHHHhhcccCCe
Q 009167 212 TVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLAL--------VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 212 ~~~Le~~LA~l~g------~--e~~i~~sSGs~Ai~~al~al--------l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
..+||++||++++ . +++++++++++++.+++.++ +++||+|+++.|+|.+....++ ..|.
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~----~~g~ 177 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTK----YFDK 177 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHH----HSCB
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHH----HcCC
Confidence 6789999999885 2 33444545569999999999 9999999999999988665443 2344
Q ss_pred EEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEEC
Q 009167 276 TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (541)
Q Consensus 276 ~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S 354 (541)
++.... .|+++|++++++ ++++|++++|+||||.+++ + +++ ++..+.|+++.... ....+..+.+++++|
T Consensus 178 ~~~~~~-~d~~~l~~~~~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S 248 (427)
T 2hox_A 178 KGYVWA-GNAANYVNVSNP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHYTPIKYKADEDILLFT 248 (427)
T ss_dssp TTEEEE-EEGGGGTTCSCG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTTSCCCSCBCCSEEEEE
T ss_pred eeeeec-CCHHHHHHhhcC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCCCccccCCCceEEEEe
Confidence 433222 367888888876 4999999999999999999 4 233 56789999864321 111122467999999
Q ss_pred CccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHHhHHHH---------------HHHHHHHHHHHH
Q 009167 355 ATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL---------------HLRVQQQNSTAL 418 (541)
Q Consensus 355 ~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l~tl---------------~~r~~~~~~~a~ 418 (541)
+||.++.+| ...|++++ +++++++++..........+...+.++...++.. ....++..++.+
T Consensus 249 ~SK~~g~~G-~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
T 2hox_A 249 MSKFTGHSG-SRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWV 327 (427)
T ss_dssp HHHHTSCGG-GCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHH
T ss_pred ChhcCCCCC-ceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHH
Confidence 999998665 45788888 5899999887766544445555544444444431 122344556777
Q ss_pred HHHHHHHhCCCceEEeC--CCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHc-cCcCeecccCCcccccccC
Q 009167 419 RMAKILEAHPKVKRVHY--PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~--P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~p 495 (541)
.+.+.|++.+++....+ |. +...+.-.....|.++|+.++.+ ..++.+.| +..++.+..|..+.
T Consensus 328 ~l~~~L~~~~g~~~~~~~~~~-----~~~~~~~~~p~~g~f~~~~~~~~---~~~~~~~ll~~~gI~v~pg~~f~----- 394 (427)
T 2hox_A 328 NITALLDQSDRFSYQELPQSE-----YCNYFRRMRPPSPSYAWVKCEWE---EDKDCYQTFQNGRINTQNGVGFE----- 394 (427)
T ss_dssp HHHHHHTTSSSEECCCCCSCE-----EETTTTEEECCCCSEEEEEECSG---GGCSHHHHHHHTTEECEEGGGGT-----
T ss_pred HHHHHHHhCcCcccccccccc-----ccccccccCCCCceEEEEECCCc---HHHHHHHHHHHCCEEEcCCCccC-----
Confidence 88888887765421001 11 00000000122467889999742 12333332 24577777765431
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecC
Q 009167 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
..+++||||++.
T Consensus 395 -----------------~~~~~~Ris~~~ 406 (427)
T 2hox_A 395 -----------------ASSRYVRLSLIK 406 (427)
T ss_dssp -----------------SCTTEEEEECSS
T ss_pred -----------------CCCCEEEEEecC
Confidence 125789999996
No 190
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.85 E-value=3e-19 Score=191.64 Aligned_cols=291 Identities=11% Similarity=0.072 Sum_probs=186.0
Q ss_pred CccCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHhh--
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV-- 269 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~--------pGd~Vlv~~~~y~~~~~~~~~~-- 269 (541)
+.+.++.++...+|+++|+++.+. +.+++++||++|+..+++.+.. ++++||+.++.|++........
T Consensus 87 ~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~ 166 (460)
T 3gju_A 87 HAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTG 166 (460)
T ss_dssp CCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCC
T ss_pred ccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccC
Confidence 445567788899999999999854 5788888999999999988764 4689999999998843222111
Q ss_pred -------cccCCeEEEEeC--C----CC------------HHHHHHhccC---CCceEEEEeCCCCCCCcccc----HHH
Q 009167 270 -------LPKMGITATVID--P----AD------------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKL 317 (541)
Q Consensus 270 -------l~~~Gi~v~~vd--~----~d------------~e~Le~al~~---~~tklV~lesP~NPtG~i~d----l~~ 317 (541)
+......+..++ . +| +++|++++++ +++++|++|.++|++|.+.+ +++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~ 246 (460)
T 3gju_A 167 LDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEK 246 (460)
T ss_dssp CGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHH
T ss_pred CcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHH
Confidence 111111233333 1 22 6889888862 25899999988899998776 999
Q ss_pred HHHHHHhCCCEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-------h
Q 009167 318 VSDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------H 384 (541)
Q Consensus 318 Ia~la~~~gi~lIvDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-------~ 384 (541)
|.++|++||++||+||+|... .. ........|+++ ++|.++++. ...|++++++++++.+... .
T Consensus 247 l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t--~sK~l~gG~-~~lg~v~~~~~i~~~~~~~~~~~~~~~ 323 (460)
T 3gju_A 247 IQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLIT--IAKGLTSAY-APLSGVIVADRVWQVLVQGSDKLGSLG 323 (460)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEE--ECGGGTTTS-SCCEEEEEEHHHHHHHHHHHHHHCSCS
T ss_pred HHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeee--eehhhcCCC-CCeEEEEECHHHHHHHhcccccccccc
Confidence 999999999999999997642 11 122233456665 779998732 3468888999998888632 1
Q ss_pred hhcCCCchHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHH----HhCCCceEEeCCCCCCCchhhhHhhhccCcccEE
Q 009167 385 HVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKIL----EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVV 458 (541)
Q Consensus 385 ~~~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L----~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~v 458 (541)
.......++..+..++..++.+. ..+++..++.+++.+.| .++|.+..+ ++.|.++
T Consensus 324 ~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~------------------~~~g~~~ 385 (460)
T 3gju_A 324 HGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEV------------------RGDGMLA 385 (460)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEE------------------EEETTEE
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------eeeeEEE
Confidence 11123345666666666666432 22344444444444444 444444332 3357899
Q ss_pred EEEEcCCH----------HHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC---
Q 009167 459 SFEVDGDL----------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--- 525 (541)
Q Consensus 459 sf~l~~~~----------~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e--- 525 (541)
++++..+. .....+.+.|...|+.+..++ .++.|||++...
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--------------------------~~~~iRi~~~~~~t~ 439 (460)
T 3gju_A 386 AVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP--------------------------QGDILGFAPPLCLTR 439 (460)
T ss_dssp EEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS--------------------------SSCEEEECCCTTCCH
T ss_pred EEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC--------------------------CCCEEEEECCCCCCH
Confidence 99986321 124456666655565444321 146899996654
Q ss_pred -CHHHHHHHHHHHHh
Q 009167 526 -DFEDLKADVLQALH 539 (541)
Q Consensus 526 -~~edli~dL~~AL~ 539 (541)
+.+.+++.|+++|+
T Consensus 440 e~i~~~l~~l~~~l~ 454 (460)
T 3gju_A 440 EQADIVVSKTADAVK 454 (460)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 44555555655554
No 191
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.85 E-value=1.9e-19 Score=190.83 Aligned_cols=294 Identities=13% Similarity=0.092 Sum_probs=177.9
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcchHHHHHhhccc---
Q 009167 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVLPK--- 272 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all--------~pGd~Vlv~~~~y~~~~~~~~~~l~~--- 272 (541)
++.++...+|+++|+++++. ++++++++|++|+..+++.+. .++|+|++.++.|++........-..
T Consensus 68 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 147 (430)
T 3i4j_A 68 QFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGAR 147 (430)
T ss_dssp TCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-----------------
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCcccc
Confidence 67788999999999999964 577888889999999998876 34789999999998854221111000
Q ss_pred ------CCe--EEEEeCCC--------CHHHHHHhccC---CCceEEEEeCCCC-CCCcccc----HHHHHHHHHhCCCE
Q 009167 273 ------MGI--TATVIDPA--------DMEGLEAALNN---NNVSLFFTESPTN-PFLRCVD----VKLVSDLCHKKGAI 328 (541)
Q Consensus 273 ------~Gi--~v~~vd~~--------d~e~Le~al~~---~~tklV~lesP~N-PtG~i~d----l~~Ia~la~~~gi~ 328 (541)
... .+..++.. |+++|++++++ +++++|+++.++| ++|.+.+ +++|.++|++||++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 227 (430)
T 3i4j_A 148 RELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGII 227 (430)
T ss_dssp --------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCE
T ss_pred ccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 000 22233433 44888888862 3478888888888 9998887 99999999999999
Q ss_pred EEEeCCCCCCC------ccccc-ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH----hhhcCCCchHHHHH
Q 009167 329 VCIDGTFATPL------NQKAL-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVLGGALNPNAAY 397 (541)
Q Consensus 329 lIvDea~a~~~------~~~~~-~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~----~~~~G~~~s~~~a~ 397 (541)
||+||+|.... ..... ....|+++ ++|.+++ |-...|++++++++++.+... ........++..+.
T Consensus 228 li~DEv~~~~~~~g~~~~~~~~~~~~~di~t--~sK~l~~-G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~a 304 (430)
T 3i4j_A 228 FIADEVMSGMGRCGSPLALSRWSGVTPDIAV--LGKGLAA-GYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVA 304 (430)
T ss_dssp EEEECTTTTTTTTSSSSGGGGTTTCCCSEEE--ECGGGTT-TSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHH
T ss_pred EEEechhhCCCcccchhhhhhhcCCCCcEEE--EcccccC-CccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHH
Confidence 99999976431 11122 33356664 7799986 314568899999999888763 22222334566666
Q ss_pred HHHHhHHHHH--HHHHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC------
Q 009167 398 LIIRGMKTLH--LRVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------ 465 (541)
Q Consensus 398 l~l~~l~tl~--~r~~~~~~~a~~la~~L~----~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~------ 465 (541)
.++..++.+. ...++..++.+++.+.|+ ++|.+..+ ++.|.++++++.+.
T Consensus 305 aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~ 366 (430)
T 3i4j_A 305 AGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQV------------------RGTGLLLGVVLGDLATGQAF 366 (430)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEEC--------
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EEEEEEEEEEeccccccCCC
Confidence 6555665432 223444455555555444 44544322 23577899988521
Q ss_pred --HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009167 466 --LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 539 (541)
Q Consensus 466 --~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e----~~edli~dL~~AL~ 539 (541)
.+.+.++.+.|...++.+..+.... .+..++.+||+++.. +.+..++.|.++|+
T Consensus 367 ~~~~~~~~~~~~l~~~Gv~v~~~~~~~--------------------~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 426 (430)
T 3i4j_A 367 ETPGIASRIGAAALKRGLITYPGSGAE--------------------PNGRGDHLLLGPPLSITAAEVDGLLALLAGALE 426 (430)
T ss_dssp ----CHHHHHHHHHHTTEECC-------------------------------CEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhCCCEEEeccccc--------------------CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 1113456666665666655432100 122357899997743 44555666666654
Q ss_pred h
Q 009167 540 A 540 (541)
Q Consensus 540 ~ 540 (541)
+
T Consensus 427 ~ 427 (430)
T 3i4j_A 427 D 427 (430)
T ss_dssp H
T ss_pred H
Confidence 3
No 192
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.84 E-value=3.2e-20 Score=193.87 Aligned_cols=213 Identities=15% Similarity=0.101 Sum_probs=143.3
Q ss_pred hhHHHHHHHHHHHh-CC----CcEEE--eCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 210 PTTVVVEEKMSALE-GA----ESTVI--MASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 210 p~~~~Le~~LA~l~-g~----e~~i~--~sSGs~Ai~~al~all~--pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
....+++++||+++ +. +++++ +++|++|+.+++..+.. +||+|+++.|+|++....+ ...|.++..+
T Consensus 69 ~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~ 144 (394)
T 2ay1_A 69 SGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIM----NFMGLPVQTY 144 (394)
T ss_dssp SCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHH----HHHTCCEEEE
T ss_pred CCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCCceEEE
Confidence 44678999999986 43 45666 77788999999887754 9999999999999865443 3346666666
Q ss_pred CC---C----CHHHHHHhccCC--CceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCCCCCCc--------
Q 009167 281 DP---A----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-------- 340 (541)
Q Consensus 281 d~---~----d~e~Le~al~~~--~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a~~~~-------- 340 (541)
+. + |++++++++++. +++++++++|+||||.+++ +++|.++|+++|+++|+|++|.....
T Consensus 145 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 224 (394)
T 2ay1_A 145 RYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAG 224 (394)
T ss_dssp ECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHH
T ss_pred ecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHH
Confidence 54 2 789999988752 3678888999999999987 55789999999999999999876432
Q ss_pred cccc-ccC-CcEEEECCccccCCCCCceEEEEEe---ChHHHHHHH----HHhhhcCCCchHHHHHHHHHhHH-------
Q 009167 341 QKAL-SLG-ADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMK------- 404 (541)
Q Consensus 341 ~~~~-~~g-aDivv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~----~~~~~~G~~~s~~~a~l~l~~l~------- 404 (541)
...+ ..+ .++++.|+||.++.+| ...|++++ ++++++.+. ..........++..++.+...++
T Consensus 225 ~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~ 303 (394)
T 2ay1_A 225 TRLIASRIPEVLIAASCSKNFGIYR-ERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRAD 303 (394)
T ss_dssp HHHHHHHCSSEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHH
T ss_pred HHHHhhcCCCEEEEEeccCCCcCcC-CccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHH
Confidence 1111 123 3478999999998555 34688877 666554432 22111112223333333333332
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhC
Q 009167 405 ---TLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 405 ---tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
.+....++..++++.+.+.|+++
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (394)
T 2ay1_A 304 WMAELEAVRSGMLRLREQLAGELRDL 329 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22333344455666677777654
No 193
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.84 E-value=2.7e-19 Score=191.89 Aligned_cols=289 Identities=14% Similarity=0.111 Sum_probs=184.7
Q ss_pred CccCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHhh--
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV-- 269 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~--------pGd~Vlv~~~~y~~~~~~~~~~-- 269 (541)
+.+.++.++...+|+++|+++++. +.+++++||++|+..+++.+.+ ++++||+.++.|++........
T Consensus 86 ~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~ 165 (459)
T 4a6r_A 86 NTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGG 165 (459)
T ss_dssp CTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSC
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcC
Confidence 455678899999999999999864 6788888999999999998875 5789999999999843222111
Q ss_pred -------cccCCeEEEEeCCC---------C--------HHHHHHhccC---CCceEEEEeCCCCCCCcccc----HHHH
Q 009167 270 -------LPKMGITATVIDPA---------D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLV 318 (541)
Q Consensus 270 -------l~~~Gi~v~~vd~~---------d--------~e~Le~al~~---~~tklV~lesP~NPtG~i~d----l~~I 318 (541)
+......+..++.. | +++|++++++ +++++|++|.++|++|.+.+ +++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l 245 (459)
T 4a6r_A 166 MKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEI 245 (459)
T ss_dssp CTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHH
T ss_pred ChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHH
Confidence 11111123333311 2 7888888862 34788988888888888887 9999
Q ss_pred HHHHHhCCCEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH---HhhhcCC
Q 009167 319 SDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---LHHVLGG 389 (541)
Q Consensus 319 a~la~~~gi~lIvDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~---~~~~~G~ 389 (541)
.++|++||++||+||+|... .. ........|+++ ++|.+++++ ...|++++++++++.+.. .......
T Consensus 246 ~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t--~sK~l~gg~-~~lg~v~~~~~i~~~~~~~~~~~~~~t~ 322 (459)
T 4a6r_A 246 ERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFT--AAKGLSSGY-LPIGAVFVGKRVAEGLIAGGDFNHGFTY 322 (459)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTS-SCCEEEEECHHHHHHHHHHCTTHHHHHH
T ss_pred HHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeee--hhhhhcCCC-CCccceeeCHHHHHHhhcCCCcccCCCC
Confidence 99999999999999997642 11 122233467775 679998753 346888899999988872 1211112
Q ss_pred CchHHHHHHHHHhHHHHH--HHHHHHH-HHHHHHHHHH----HhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEE
Q 009167 390 ALNPNAAYLIIRGMKTLH--LRVQQQN-STALRMAKIL----EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 462 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~--~r~~~~~-~~a~~la~~L----~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l 462 (541)
..++..+..++..++.+. ..+++.. ++.+++.+.| .++|.+..+ ++.|.+++|++
T Consensus 323 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~------------------~~~g~~~~~~~ 384 (459)
T 4a6r_A 323 SGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDV------------------RGVGMVQAFTL 384 (459)
T ss_dssp CSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEE------------------EEETTEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EEEEEEEEEEE
Confidence 235666666666665432 2233444 4445555555 334433322 34678999988
Q ss_pred cCC----------HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHH
Q 009167 463 DGD----------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFE 528 (541)
Q Consensus 463 ~~~----------~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e----~~e 528 (541)
..+ ......+.+.|...|+.+..+ | +.|||++.+- +.+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-------------------------g---~~iRi~~~~~~t~e~i~ 436 (459)
T 4a6r_A 385 VKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRAC-------------------------G---DHIVSAPPLVMTRAEVD 436 (459)
T ss_dssp CSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEE-------------------------T---TEEEECCCTTCCHHHHH
T ss_pred ecCccccccccchHHHHHHHHHHHHHCCeEEecC-------------------------C---CEEEEECCCCCCHHHHH
Confidence 632 122455666665556544321 1 5799996554 344
Q ss_pred HHHHHHHHHHh
Q 009167 529 DLKADVLQALH 539 (541)
Q Consensus 529 dli~dL~~AL~ 539 (541)
.+++.|+++|+
T Consensus 437 ~~l~~l~~~l~ 447 (459)
T 4a6r_A 437 EMLAVAERCLE 447 (459)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555555554
No 194
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.84 E-value=4.2e-20 Score=199.97 Aligned_cols=256 Identities=15% Similarity=0.113 Sum_probs=154.8
Q ss_pred CchhHHHHH----HHHHHHhCCCc----E-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHH--HH-H-hhcccCC
Q 009167 208 GNPTTVVVE----EKMSALEGAES----T-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRI--FI-E-TVLPKMG 274 (541)
Q Consensus 208 ~~p~~~~Le----~~LA~l~g~e~----~-i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~--~~-~-~~l~~~G 274 (541)
+++..++|| +++++++|.+. + ++++||++|+.+++.++++|||+|++.++.|++... .+ . ..+...|
T Consensus 94 G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g 173 (490)
T 2a7v_A 94 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATS 173 (490)
T ss_dssp ----CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC------------------------
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcC
Confidence 345555666 99999999975 3 455699999999999999999999999999976421 10 0 0111223
Q ss_pred e--EEEEeC------CCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCC-----CCcc
Q 009167 275 I--TATVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-----PLNQ 341 (541)
Q Consensus 275 i--~v~~vd------~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~-----~~~~ 341 (541)
. ++..++ ..|+++|++++++.++++|+++.++|| .+.|+++|.++|+++|++|++|+++.. +...
T Consensus 174 ~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~ 251 (490)
T 2a7v_A 174 IFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIP 251 (490)
T ss_dssp -------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSC
T ss_pred CeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC--CcccHHHHHHHHHHcCCEEEEccccccccccCCcCC
Confidence 2 222322 238999999886434899999888886 467999999999999999999999643 2223
Q ss_pred cccccCCcEEEECCccccCCCCCceEEEEEeChH---------------HHHHHHHHhhh--cCCCchHHHHHH--HHH-
Q 009167 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------LVTQIRNLHHV--LGGALNPNAAYL--IIR- 401 (541)
Q Consensus 342 ~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~---------------li~~l~~~~~~--~G~~~s~~~a~l--~l~- 401 (541)
.++. ++|+++.|+||+++|+. ||+++++++ +.++++..... .|+......+.+ ++.
T Consensus 252 ~~~~-~aDiv~~S~hK~l~Gp~---GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~ 327 (490)
T 2a7v_A 252 SPFK-HADIVTTTTHKTLRGAR---SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQ 327 (490)
T ss_dssp CGGG-TCSEEEEESSGGGCSCS---CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHH
T ss_pred CCCC-CCCEEEECCcccCcccc---chheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHH
Confidence 4444 69999999999997763 788888653 45666544321 122222211211 111
Q ss_pred hH-HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcC
Q 009167 402 GM-KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 480 (541)
Q Consensus 402 ~l-~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~ 480 (541)
.+ +.+..+.++..+|++++++.|.+. ++. +..++- ...++++.+.........+.+.|+..+
T Consensus 328 ~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~-v~~~~t---------------~t~lv~vdl~~~g~~~~~~~~~L~~~G 390 (490)
T 2a7v_A 328 ACTPMFREYSLQVLKNARAMADALLER-GYS-LVSGGT---------------DNHLVLVDLRPKGLDGARAERVLELVS 390 (490)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHT-TCE-EGGGSC---------------SSSEEEEECTTTTCCHHHHHHHHHHTT
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHc-CcE-EecCCC---------------CCeEEEEEeCCCCCCHHHHHHHHHhCC
Confidence 11 234566778889999999999885 332 211111 134788887532112334445555567
Q ss_pred eecccC
Q 009167 481 IAPSFG 486 (541)
Q Consensus 481 iavS~G 486 (541)
|.++.+
T Consensus 391 I~v~~~ 396 (490)
T 2a7v_A 391 ITANKN 396 (490)
T ss_dssp EECEEE
T ss_pred eEEecC
Confidence 777754
No 195
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.84 E-value=9.3e-20 Score=196.80 Aligned_cols=248 Identities=15% Similarity=0.154 Sum_probs=166.5
Q ss_pred chhHHHHH----HHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHhccC---------CC----------EEEE
Q 009167 209 NPTTVVVE----EKMSALEGAES-----------TVIMASGMSASTVMLLALVPA---------GG----------HIVT 254 (541)
Q Consensus 209 ~p~~~~Le----~~LA~l~g~e~-----------~i~~sSGs~Ai~~al~all~p---------Gd----------~Vlv 254 (541)
.|...++| +.+++++|.+. .+++++|++|+..++.+...+ || .|++
T Consensus 108 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~ 187 (486)
T 1js3_A 108 SPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYA 187 (486)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEE
T ss_pred ChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEE
Confidence 45555555 45577778752 688889999999888765321 43 3788
Q ss_pred cCCCCcchHHHHHhhcccCCeEEEEeCCC-----CHHHHHHhccCCCc------eEEEEeCCCCCCCccccHHHHHHHHH
Q 009167 255 TTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNNNV------SLFFTESPTNPFLRCVDVKLVSDLCH 323 (541)
Q Consensus 255 ~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~~t------klV~lesP~NPtG~i~dl~~Ia~la~ 323 (541)
+.+.|.+.... +...|++++.++.+ |+++|+++++++ + .+|++++|+||+|.+.|+++|+++|+
T Consensus 188 s~~~h~s~~~~----~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~-~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~ 262 (486)
T 1js3_A 188 SDQAHSSVERA----GLIGGVKLKAIPSDGKFAMRASALQEALERD-KAAGLIPFFVVATLGTTSCCSFDNLLEVGPICH 262 (486)
T ss_dssp ETTCCHHHHHH----HHHHTCEEEEECCCTTSCCCHHHHHHHHHHH-HHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred CCCCcHHHHHH----HHhCCCceEEeecCCCCCCCHHHHHHHHHHH-HhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 99999885543 34458888888753 899999999763 4 38999999999999999999999999
Q ss_pred hCCCEEEEeCCCCCCCccc----cc---ccCCcEEEECCccccCCCCCceEEEEEeCh-HH-HHHHH---HHhhh-----
Q 009167 324 KKGAIVCIDGTFATPLNQK----AL---SLGADLVLHSATKFIGGHNDVLAGSISGSG-KL-VTQIR---NLHHV----- 386 (541)
Q Consensus 324 ~~gi~lIvDea~a~~~~~~----~~---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~l-i~~l~---~~~~~----- 386 (541)
+||+++|+|++|+.+.... .. -.++|.++.++||+++++. .+|+++.++ ++ .+.+. .+...
T Consensus 263 ~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~--~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~ 340 (486)
T 1js3_A 263 EEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNF--DCSAMWVKRRTDLTGAFKLDPVYLKHSHQGS 340 (486)
T ss_dssp HTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCS--SCEEEEESCHHHHHGGGC------------C
T ss_pred HcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCc--ceEEEEEeCHHHHHHHhcCCchhhCCCcccc
Confidence 9999999999988643211 11 1268999999999998653 257777654 33 33221 11100
Q ss_pred ------------cCCCchHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcc
Q 009167 387 ------------LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT 452 (541)
Q Consensus 387 ------------~G~~~s~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~ 452 (541)
.+........|.+++ +.+.+..++++..++++++.+.|++.|.++.+..|
T Consensus 341 ~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~---------------- 404 (486)
T 1js3_A 341 GLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEV---------------- 404 (486)
T ss_dssp CSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCC----------------
T ss_pred cCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC----------------
Confidence 011123344444444 34556677778888999999999988776533222
Q ss_pred CcccEEEEEEcCCHHHHHHHHHHccCcC
Q 009167 453 GFGGVVSFEVDGDLTATIKFIDALKIPY 480 (541)
Q Consensus 453 g~g~~vsf~l~~~~~~~~~~l~~L~~~~ 480 (541)
.++++.|.+++......++.+.|...+
T Consensus 405 -~~~~v~f~~~~~~~~~~~l~~~L~~~g 431 (486)
T 1js3_A 405 -TLGLVCFRLKGSDGLNEALLERINSAR 431 (486)
T ss_dssp -CSSEEEEEESSCHHHHHHHHHHHHHHT
T ss_pred -ceeEEEEEecChHHHHHHHHHHHHhcC
Confidence 246888888753223456666665433
No 196
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.84 E-value=1.6e-19 Score=203.95 Aligned_cols=218 Identities=12% Similarity=0.045 Sum_probs=156.6
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
+++...++|+.+|+++|.+.++++++|+ +|+.+++.+++++||+|+++.++|.+.+.. .+...|+++++++.
T Consensus 171 ~~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~---~~~l~Ga~~v~v~~~~~~ 247 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNS---ALAMAGGRPVYLQTNRNP 247 (730)
T ss_dssp TBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH---HTTTTCCEEEEECEEECT
T ss_pred ChHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH---HHHHCCCEEEEEeCCccc
Confidence 4567899999999999999889999997 899999999999999999999999886643 14556887776643
Q ss_pred ------CCHHHH-----HHhccCCC-----c----eEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc-
Q 009167 283 ------ADMEGL-----EAALNNNN-----V----SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ- 341 (541)
Q Consensus 283 ------~d~e~L-----e~al~~~~-----t----klV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~- 341 (541)
.|+++| ++++++++ + ++|++++| |++|.+.|+++|+++|+++|++||+|++|+..+..
T Consensus 248 ~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~ 326 (730)
T 1c4k_A 248 YGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFI 326 (730)
T ss_dssp TCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSS
T ss_pred cCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccC
Confidence 267777 88887531 4 89999998 58999999999999999999999999998753211
Q ss_pred ------ccccc---CCc----EEEECCccccCCCCCceEEEEEeChHH---------HHHHHHHhhhc-CCCchHHHHHH
Q 009167 342 ------KALSL---GAD----LVLHSATKFIGGHNDVLAGSISGSGKL---------VTQIRNLHHVL-GGALNPNAAYL 398 (541)
Q Consensus 342 ------~~~~~---gaD----ivv~S~sK~lgg~gd~~gG~lv~~~~l---------i~~l~~~~~~~-G~~~s~~~a~l 398 (541)
.++.. |+| +++.|+||+++|+. .+|+++.+++. ...+......+ .+.++......
T Consensus 327 ~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~--~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaa 404 (730)
T 1c4k_A 327 PMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAA 404 (730)
T ss_dssp GGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHH
T ss_pred cccCCcCcccccccCCCCCCEEEEECCCCCCCCCC--CEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHH
Confidence 22333 788 99999999998765 35777543322 12333322222 23333322211
Q ss_pred HHHhHH-----HHHHHHHHHHHHHHHHHHHHHh-CCCce
Q 009167 399 IIRGMK-----TLHLRVQQQNSTALRMAKILEA-HPKVK 431 (541)
Q Consensus 399 ~l~~l~-----tl~~r~~~~~~~a~~la~~L~~-~p~v~ 431 (541)
+..+++ ....++++..++++++.+.|++ .+++.
T Consensus 405 l~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~ 443 (730)
T 1c4k_A 405 LDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFR 443 (730)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeE
Confidence 111222 2345667777888899999988 56654
No 197
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.84 E-value=2e-19 Score=195.97 Aligned_cols=221 Identities=13% Similarity=0.134 Sum_probs=156.3
Q ss_pred CchhHHHHHH----HHHHHhCCC----cEEEeCCHHHHHHHHHHHhcc--------------CCCEEEEcCCCCcchHHH
Q 009167 208 GNPTTVVVEE----KMSALEGAE----STVIMASGMSASTVMLLALVP--------------AGGHIVTTTDCYRKTRIF 265 (541)
Q Consensus 208 ~~p~~~~Le~----~LA~l~g~e----~~i~~sSGs~Ai~~al~all~--------------pGd~Vlv~~~~y~~~~~~ 265 (541)
..|...++|+ .+++++|.+ ..+++++|++|+..++.+... +++.|+++...|.+....
T Consensus 129 ~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~ 208 (511)
T 3vp6_A 129 IAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKA 208 (511)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHH
Confidence 5676666665 456667764 567888889999888876644 577999999999886654
Q ss_pred HHhhcccCCe---EEEEeCCC-----CHHHHHHhccCC-----CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEe
Q 009167 266 IETVLPKMGI---TATVIDPA-----DMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 266 ~~~~l~~~Gi---~v~~vd~~-----d~e~Le~al~~~-----~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvD 332 (541)
+. ..|+ +++.++.+ |+++|+++|++. ++++|++++++|++|.+.|+++|+++|++||+++|+|
T Consensus 209 ~~----~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD 284 (511)
T 3vp6_A 209 GA----ALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD 284 (511)
T ss_dssp HH----HTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred HH----HcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEE
Confidence 43 2344 67777644 899999998642 1789999999999999999999999999999999999
Q ss_pred CCCCCCCcccc----c---ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-h------------------
Q 009167 333 GTFATPLNQKA----L---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-V------------------ 386 (541)
Q Consensus 333 ea~a~~~~~~~----~---~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~------------------ 386 (541)
++|+.+....+ . ..++|+++.++||+++++.+. +++++.+++++........ .
T Consensus 285 ~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~-g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 363 (511)
T 3vp6_A 285 AAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQC-SAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKA 363 (511)
T ss_dssp ETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCC-EEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGS
T ss_pred ccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCe-EEEEEeCHHHHHHHhccCCccccCcccccccccCccCCC
Confidence 99887543211 1 125799999999998866432 4444445555554321100 0
Q ss_pred --cCCCchHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Q 009167 387 --LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRV 433 (541)
Q Consensus 387 --~G~~~s~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v 433 (541)
.+........|.+++ +.+.+..++++..++++++.+.|++.|+++-+
T Consensus 364 ~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~ 414 (511)
T 3vp6_A 364 IQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMV 414 (511)
T ss_dssp SCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEES
T ss_pred CCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 011122344454444 44567788888999999999999988877543
No 198
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.84 E-value=6.5e-20 Score=197.05 Aligned_cols=289 Identities=12% Similarity=0.088 Sum_probs=188.2
Q ss_pred cCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHhh----
Q 009167 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV---- 269 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~-------pG-d~Vlv~~~~y~~~~~~~~~~---- 269 (541)
++++.++...+|+++|+++++. +.+++++||++|+..+++.+.+ +| +.||+.++.|++........
T Consensus 112 ~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~ 191 (457)
T 3tfu_A 112 FGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPH 191 (457)
T ss_dssp SSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC
T ss_pred ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCc
Confidence 4778889999999999999964 6788889999999999988764 55 48999999998743221111
Q ss_pred ------cccCCeEEEEeCC-------CCHHHHHHhcc---CCCceEEEEeC-CCCCCCcccc----HHHHHHHHHhCCCE
Q 009167 270 ------LPKMGITATVIDP-------ADMEGLEAALN---NNNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAI 328 (541)
Q Consensus 270 ------l~~~Gi~v~~vd~-------~d~e~Le~al~---~~~tklV~les-P~NPtG~i~d----l~~Ia~la~~~gi~ 328 (541)
.......+.+++. .|+++|+++++ + ++++|++|+ ++|++|.+++ +++|.++|++||++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~-~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gil 270 (457)
T 3tfu_A 192 GGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAG-ELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVL 270 (457)
T ss_dssp ----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGG-GEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCE
T ss_pred ccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCC-CEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 1111112233332 37889999887 4 589999999 9999999887 89999999999999
Q ss_pred EEEeCCCCCCC------cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-----hhhcCCCchHHHHH
Q 009167 329 VCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGGALNPNAAY 397 (541)
Q Consensus 329 lIvDea~a~~~------~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~-----~~~~G~~~s~~~a~ 397 (541)
||+||+|.... .........|++ +++|.++|+. ...|++++++++++.+... ........++..+.
T Consensus 271 lI~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~gG~-~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~a 347 (457)
T 3tfu_A 271 LIFDEIATGFGRTGALFAADHAGVSPDIM--CVGKALTGGY-LSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACA 347 (457)
T ss_dssp EEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTTS-SCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHH
T ss_pred EEEEcCccCCccccchhHhHhcCCCceEE--EEChhhhCCC-cceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHH
Confidence 99999976321 112223446777 6889998732 2478889999998888521 11112234666666
Q ss_pred HHHHhHHHHH--HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHH
Q 009167 398 LIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA 475 (541)
Q Consensus 398 l~l~~l~tl~--~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~ 475 (541)
.++..++.+. ...++..++.+++.+.|++.. .+|.+ ...++.|.+++|+++.. ....++.+.
T Consensus 348 aa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~v----------~~vr~~G~~~~i~l~~~-~~~~~~~~~ 411 (457)
T 3tfu_A 348 VSVASVELLLGQDWRTRITELAAGLTAGLDTAR-----ALPAV----------TDVRVCGAIGVIECDRP-VDLAVATPA 411 (457)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGG-----GSTTE----------EEEEECSSCEEEEESSC-CCHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-----cCCCe----------eeeecCCeEEEEEECCc-ccHHHHHHH
Confidence 6666666543 224445556666666666421 12211 11234678999999753 124556666
Q ss_pred ccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHhh
Q 009167 476 LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALHA 540 (541)
Q Consensus 476 L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e----~~edli~dL~~AL~~ 540 (541)
|...|+.+... .+.|||+...- +.+.+++.|.+++++
T Consensus 412 l~~~Gv~v~~~----------------------------~~~lRi~p~~~~t~eei~~~l~~L~~~l~~ 452 (457)
T 3tfu_A 412 ALDRGVWLRPF----------------------------RNLVYAMPPYICTPAEITQITSAMVEVARL 452 (457)
T ss_dssp HHHTTEECCCB----------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCeEEEec----------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 65445544321 25799986543 445556666666553
No 199
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.84 E-value=1.9e-19 Score=192.28 Aligned_cols=296 Identities=14% Similarity=0.162 Sum_probs=188.6
Q ss_pred CccCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHHHHHHHHHHHhc-----c---CCCEEEEcCCCCcchHHHHHhhc--
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGAE-STVIMASGMSASTVMLLALV-----P---AGGHIVTTTDCYRKTRIFIETVL-- 270 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~e-~~i~~sSGs~Ai~~al~all-----~---pGd~Vlv~~~~y~~~~~~~~~~l-- 270 (541)
+...++.++...+|+++|+++++.. ++++++||++|+..+++.+. . ++|+|++.++.|++........-
T Consensus 83 ~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~ 162 (452)
T 3n5m_A 83 YFPMSQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQ 162 (452)
T ss_dssp CCCTTSEEHHHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCC
T ss_pred CcccccCCHHHHHHHHHHHHhCCCCceEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCc
Confidence 3334577889999999999999753 47778889999999998876 5 78999999999987432221110
Q ss_pred -------ccCCeEEEEeCC--------CC---------HHHHHHhcc---CCCceEEEEeCC-CCCCCcccc----HHHH
Q 009167 271 -------PKMGITATVIDP--------AD---------MEGLEAALN---NNNVSLFFTESP-TNPFLRCVD----VKLV 318 (541)
Q Consensus 271 -------~~~Gi~v~~vd~--------~d---------~e~Le~al~---~~~tklV~lesP-~NPtG~i~d----l~~I 318 (541)
......+.+++. +| +++|+++++ +.++++|++|++ +| +|.+++ +++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l 241 (452)
T 3n5m_A 163 AQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAV 241 (452)
T ss_dssp GGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHH
T ss_pred hhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHH
Confidence 111112333332 23 899999887 225889999998 89 999887 9999
Q ss_pred HHHHHhCCCEEEEeCCCCCCC------cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH---Hh---hh
Q 009167 319 SDLCHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---LH---HV 386 (541)
Q Consensus 319 a~la~~~gi~lIvDea~a~~~------~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~---~~---~~ 386 (541)
.++|++||++||+||+|.... .........|+++ ++|.+++ |-...|++++++++++.+.. .. ..
T Consensus 242 ~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t--~sK~l~~-G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~ 318 (452)
T 3n5m_A 242 HETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIIT--MAKGITS-AYLPLSATAVKREIYEAFKGKGEYEFFRHI 318 (452)
T ss_dssp HHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGGT-TSSCCEEEEEEHHHHGGGCSSSTTCSCCCC
T ss_pred HHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEe--ecccccC-CCcceEEEEECHHHHHHHhhccCCCCcccc
Confidence 999999999999999976321 1222233456664 7899986 31346888889988887743 11 11
Q ss_pred cCCCchHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEE
Q 009167 387 LGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF 460 (541)
Q Consensus 387 ~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf 460 (541)
.....++..+..++..++.+. ...++..++.+++.+.|++ +|.+..+ ++.|.+++|
T Consensus 319 ~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~i 380 (452)
T 3n5m_A 319 NTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDI------------------RGKGLLVGI 380 (452)
T ss_dssp CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE------------------EESSSCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EEEEEEEEE
Confidence 122345666666666665432 2244444555555555543 3433222 235778888
Q ss_pred EEcCC--------HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC----HH
Q 009167 461 EVDGD--------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED----FE 528 (541)
Q Consensus 461 ~l~~~--------~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~----~e 528 (541)
++..+ .+...++.+.|...|+.+..++.+. + ..++.|||+++... .+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~----~-----------------~~~~~iRi~~~~~~t~e~i~ 439 (452)
T 3n5m_A 381 ELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTT----A-----------------GYNNILTLAPPLVISSEEIA 439 (452)
T ss_dssp EEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSS----T-----------------TCCCEEEECCCTTCCHHHHH
T ss_pred EEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCccc----C-----------------CCCCEEEEECCCCCCHHHHH
Confidence 87421 2234566666665677666554321 0 12578999876644 44
Q ss_pred HHHHHHHHHHhh
Q 009167 529 DLKADVLQALHA 540 (541)
Q Consensus 529 dli~dL~~AL~~ 540 (541)
..++.|.++|++
T Consensus 440 ~~l~~l~~~l~~ 451 (452)
T 3n5m_A 440 FVIGTLKTAMER 451 (452)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHh
Confidence 455555555544
No 200
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.84 E-value=8.7e-20 Score=193.82 Aligned_cols=259 Identities=13% Similarity=0.148 Sum_probs=174.5
Q ss_pred CCCchhHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhc----------cc
Q 009167 206 RYGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL----------PK 272 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~-g~e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l----------~~ 272 (541)
.+.++...+++++|++++ +.+.+++++||++|+.++++.. +.++++||+.++.|++......... ..
T Consensus 92 ~~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~ 171 (434)
T 2epj_A 92 GAPGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTS 171 (434)
T ss_dssp SSCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESS
T ss_pred CCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCC
Confidence 367888999999999999 6678889999999999999861 3456788888899987431110000 01
Q ss_pred CCe------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCc
Q 009167 273 MGI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN 340 (541)
Q Consensus 273 ~Gi------~v~~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~ 340 (541)
.|+ .+..++..|+++|++++++ .++++|+++..+|++|.+.| +++|.++|++||++||+||+|.....
T Consensus 172 ~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~ 251 (434)
T 2epj_A 172 AGVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRL 251 (434)
T ss_dssp TTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTS
T ss_pred CCCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeC
Confidence 233 2455566799999999863 24889988877788999998 99999999999999999999873311
Q ss_pred c-----cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-hcCC--CchHHHHHHHHHhHHHHH--HHH
Q 009167 341 Q-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGG--ALNPNAAYLIIRGMKTLH--LRV 410 (541)
Q Consensus 341 ~-----~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G~--~~s~~~a~l~l~~l~tl~--~r~ 410 (541)
. .......|++ |++|.+++ | ..+|++++++++++.+..... ..+. ..++..+..+...++.+. ...
T Consensus 252 g~~~~~~~~~~~~di~--s~sK~l~~-G-~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~ 327 (434)
T 2epj_A 252 GLEGAQGYFNIEGDII--VLGKIIGG-G-FPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVY 327 (434)
T ss_dssp STTHHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHH
T ss_pred CcchhhHHhCCCCCee--eecchhcC-C-cceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHH
Confidence 1 1122346765 68899987 4 457999999888776654111 1222 345666666555665543 234
Q ss_pred HHHHHHHHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC------------HHHHHHHHH
Q 009167 411 QQQNSTALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFID 474 (541)
Q Consensus 411 ~~~~~~a~~la~~L~~~----p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~------------~~~~~~~l~ 474 (541)
++..++.+++.+.|++. +.+.. .++.|++++|+++.. .....++.+
T Consensus 328 ~~~~~~~~~l~~~L~~~~~~~~~~~~------------------~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (434)
T 2epj_A 328 SVSREAAKALEEAASEVLDRTGLPYT------------------INRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHE 389 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEE------------------EEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcEE------------------EEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHH
Confidence 45556666666666542 22111 123578999999641 234567777
Q ss_pred HccCcCeecccC
Q 009167 475 ALKIPYIAPSFG 486 (541)
Q Consensus 475 ~L~~~~iavS~G 486 (541)
.|...++.+..|
T Consensus 390 ~l~~~Gv~v~~~ 401 (434)
T 2epj_A 390 EMLRRGVFIAPS 401 (434)
T ss_dssp HHHHTTEECCSS
T ss_pred HHHHCCeEEecc
Confidence 776667766654
No 201
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.84 E-value=1.5e-19 Score=191.87 Aligned_cols=259 Identities=17% Similarity=0.188 Sum_probs=171.1
Q ss_pred CCCchhHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhhcc----------c
Q 009167 206 RYGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLP----------K 272 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g-~e~~i~~sSGs~Ai~~al~all~--pGd~Vlv~~~~y~~~~~~~~~~l~----------~ 272 (541)
.|+++...+|+++|+++++ .+.+++++||++|+..+++.+.. ++++||+.++.|++.......... .
T Consensus 91 ~~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 170 (434)
T 3l44_A 91 GTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDS 170 (434)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSS
T ss_pred CCCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCc
Confidence 3678889999999999985 46788888999999999987654 789999999999874311100000 0
Q ss_pred CCe------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCc
Q 009167 273 MGI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN 340 (541)
Q Consensus 273 ~Gi------~v~~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~ 340 (541)
.++ .+..++.+|+++|++++++ .++++|++|.++|++|.+.+ +++|.++|++||++||+||+|.....
T Consensus 171 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~ 250 (434)
T 3l44_A 171 AGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRF 250 (434)
T ss_dssp TTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTS
T ss_pred CCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceec
Confidence 011 4555666799999998862 24788999888888898888 99999999999999999999874311
Q ss_pred -----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh---hhcCCCchHHHHHHHHHhHHHH--HHHH
Q 009167 341 -----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTL--HLRV 410 (541)
Q Consensus 341 -----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~---~~~G~~~s~~~a~l~l~~l~tl--~~r~ 410 (541)
........|++ +++|.+++ | ...|++++++++++.+.... .......++..+..++..++.+ +...
T Consensus 251 g~~~~~~~~~~~~di~--t~sK~~~~-G-~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~ 326 (434)
T 3l44_A 251 MYGGAQDLLGVTPDLT--ALGKVIGG-G-LPIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLY 326 (434)
T ss_dssp SSSCHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHH
T ss_pred cccHHHHHcCCCCCee--ehhhhhcC-C-cCeeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHH
Confidence 11223345655 57899984 3 45788899999888765421 1112234566666555555543 2234
Q ss_pred HHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC------------CHHHHHHHHH
Q 009167 411 QQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG------------DLTATIKFID 474 (541)
Q Consensus 411 ~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~------------~~~~~~~~l~ 474 (541)
++..++.+++.+.|++ ++.+..+ ++.|+++++++.. +......+.+
T Consensus 327 ~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (434)
T 3l44_A 327 EKLDELGATLEKGILEQAAKHNIDITL------------------NRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFK 388 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEE------------------EEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEE------------------EeeccEEEEEEecCcccchhhccccCHHHHHHHHH
Confidence 4555556666666654 3322211 2367899998842 1233456666
Q ss_pred HccCcCeecccC
Q 009167 475 ALKIPYIAPSFG 486 (541)
Q Consensus 475 ~L~~~~iavS~G 486 (541)
.|...|+.+..+
T Consensus 389 ~l~~~Gv~v~~~ 400 (434)
T 3l44_A 389 LMLQEGVNLAPS 400 (434)
T ss_dssp HHHHTTEECCSS
T ss_pred HHHHCCeEEeec
Confidence 665556655543
No 202
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.83 E-value=1.7e-19 Score=198.14 Aligned_cols=150 Identities=16% Similarity=0.284 Sum_probs=114.0
Q ss_pred cEEEeCCH-HHHHHHHHHH-----hccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-------CCHHHHHHhcc
Q 009167 227 STVIMASG-MSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-------ADMEGLEAALN 293 (541)
Q Consensus 227 ~~i~~sSG-s~Ai~~al~a-----ll~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~-------~d~e~Le~al~ 293 (541)
+.|++++| ++++.+++.+ ++++||+|++++|+|++..... .+...|.++..++. .|+++|+++++
T Consensus 166 ~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~ 243 (546)
T 2zy4_A 166 VNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIP--ELAQYALEEVAINADPSLNWQYPDSELDKLKD 243 (546)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHH--HSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS
T ss_pred ceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHH--HHcCCCcEEEEEecCcccCCCCCHHHHHHhhC
Confidence 45555555 5999999887 5789999999999998865432 24455777777653 47889988886
Q ss_pred CCCceEEEEeCCCCCCCcccc---HHHHHHHH--HhCCCEEEEeCCCCCCCc--ccccc--cCCcEEEECCccccCCCCC
Q 009167 294 NNNVSLFFTESPTNPFLRCVD---VKLVSDLC--HKKGAIVCIDGTFATPLN--QKALS--LGADLVLHSATKFIGGHND 364 (541)
Q Consensus 294 ~~~tklV~lesP~NPtG~i~d---l~~Ia~la--~~~gi~lIvDea~a~~~~--~~~~~--~gaDivv~S~sK~lgg~gd 364 (541)
+ ++++|++++|+||||.+++ +++|+++| +++|++||+||+|..... ..... .+.++++.|+||.+|.+|
T Consensus 244 ~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G- 321 (546)
T 2zy4_A 244 P-AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATG- 321 (546)
T ss_dssp T-TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGG-
T ss_pred C-CCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCC-
Confidence 6 5999999999999999998 45678888 789999999999875432 11111 246799999999998665
Q ss_pred ceEEEEEeChH-HHHHH
Q 009167 365 VLAGSISGSGK-LVTQI 380 (541)
Q Consensus 365 ~~gG~lv~~~~-li~~l 380 (541)
...|+++++++ +++++
T Consensus 322 lRiG~~~~~~~~l~~~l 338 (546)
T 2zy4_A 322 WRLGVVAAHQQNVFDLA 338 (546)
T ss_dssp GCEEEEEEESSCHHHHH
T ss_pred cceEEEEECCHHHHHHH
Confidence 45788888764 76665
No 203
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.83 E-value=1.6e-19 Score=192.94 Aligned_cols=286 Identities=14% Similarity=0.109 Sum_probs=176.0
Q ss_pred CCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc----CC----CEEEEcCCCCcchHHHHHhh-----
Q 009167 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP----AG----GHIVTTTDCYRKTRIFIETV----- 269 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~----pG----d~Vlv~~~~y~~~~~~~~~~----- 269 (541)
.++.++...+|+++|+++.+. +.+++++||++|+..+++.+.. +| |+||+.++.|++........
T Consensus 82 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 161 (448)
T 3dod_A 82 LGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIEL 161 (448)
T ss_dssp SSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC------------------
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCcc
Confidence 557788899999999999853 6788889999999999988765 44 99999999998743211110
Q ss_pred ----cccCCeEEEEeCCC----------------CHHHHHHhcc--CCCceEEEEeCCC-CCCCcccc----HHHHHHHH
Q 009167 270 ----LPKMGITATVIDPA----------------DMEGLEAALN--NNNVSLFFTESPT-NPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 270 ----l~~~Gi~v~~vd~~----------------d~e~Le~al~--~~~tklV~lesP~-NPtG~i~d----l~~Ia~la 322 (541)
+......+..++.. |+++|+++++ ..++++|++|.++ |++|.+.+ +++|.++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~ 241 (448)
T 3dod_A 162 FHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELC 241 (448)
T ss_dssp -----------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHH
T ss_pred ccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHH
Confidence 00001122333332 3788998886 2348899999998 99998877 99999999
Q ss_pred HhCCCEEEEeCCCCCCC------cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH-------HhhhcCC
Q 009167 323 HKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-------LHHVLGG 389 (541)
Q Consensus 323 ~~~gi~lIvDea~a~~~------~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~-------~~~~~G~ 389 (541)
++||++||+||++.... .........|+++ ++|.+++ |-+..|++++++++++.+.. .......
T Consensus 242 ~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t--~sK~l~~-G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~ 318 (448)
T 3dod_A 242 TTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMA--AGKGITG-GYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSY 318 (448)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE--ECGGGGT-TSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTT
T ss_pred HHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEE--ecccccC-CcCceEEEEECHHHHHHhhhccccCCcccccCCC
Confidence 99999999999976321 1122233456664 7799986 32356889999988887754 2211223
Q ss_pred CchHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHh---CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC
Q 009167 390 ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA---HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~---~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~ 464 (541)
..++..+..++..++.+. ...++..++.+++.+.|++ +|.+..+ ++.|.++++++..
T Consensus 319 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~------------------~~~g~~~~~~~~~ 380 (448)
T 3dod_A 319 TGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDI------------------RQLGFMCGAELVR 380 (448)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEE------------------EEETTEEEEEECS
T ss_pred CcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EeeeEEEEEEEcc
Confidence 345666666666666442 2244445555555555543 3322221 2357799999864
Q ss_pred CHH----------HHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHHH
Q 009167 465 DLT----------ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDL 530 (541)
Q Consensus 465 ~~~----------~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e----~~edl 530 (541)
+.. ....+.+.|...|+.+..+ .+.|||++... +.+..
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------~~~iRi~~~~~~t~e~i~~~ 432 (448)
T 3dod_A 381 SKETKEPYPADRRIGYKVSLKMRELGMLTRPL----------------------------GDVIAFLPPLASTAEELSEM 432 (448)
T ss_dssp BTTTTBCCCGGGCHHHHHHHHHHHTTEECCEE----------------------------TTEEEECCCTTCCHHHHHHH
T ss_pred CcccccccchhhHHHHHHHHHHHHCCcEEecc----------------------------CCEEEEECCCCCCHHHHHHH
Confidence 211 1345555555445544321 25799976654 34555
Q ss_pred HHHHHHHHh
Q 009167 531 KADVLQALH 539 (541)
Q Consensus 531 i~dL~~AL~ 539 (541)
++.|+++|+
T Consensus 433 l~~l~~~l~ 441 (448)
T 3dod_A 433 VAIMKQAIH 441 (448)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555554
No 204
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.83 E-value=2.1e-19 Score=192.47 Aligned_cols=291 Identities=14% Similarity=0.098 Sum_probs=184.1
Q ss_pred CccCCCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhh-------
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV------- 269 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~all~--pGd~Vlv~~~~y~~~~~~~~~~------- 269 (541)
+.+.++.++...+|+++|+++.+. +.+++++||++|+.++++.... .+++|++.++.|++........
T Consensus 96 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~ 175 (451)
T 3oks_A 96 TCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPY 175 (451)
T ss_dssp CTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTT
T ss_pred ccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCccc
Confidence 445667889999999999999863 5688899999999999976653 4589999999998754322111
Q ss_pred ---cccCCeEEEEeCCC------------------CHHHHHHhcc----CCCceEEEEeCCCCCCCcccc----HHHHHH
Q 009167 270 ---LPKMGITATVIDPA------------------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSD 320 (541)
Q Consensus 270 ---l~~~Gi~v~~vd~~------------------d~e~Le~al~----~~~tklV~lesP~NPtG~i~d----l~~Ia~ 320 (541)
+......+..++.. +++.+++.++ ++++++|++|..++..|.+.+ +++|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~ 255 (451)
T 3oks_A 176 KDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLD 255 (451)
T ss_dssp TTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHH
T ss_pred ccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHH
Confidence 11111134444432 2333334332 234778888776666777776 999999
Q ss_pred HHHhCCCEEEEeCCCCCCC------cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHH
Q 009167 321 LCHKKGAIVCIDGTFATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 394 (541)
Q Consensus 321 la~~~gi~lIvDea~a~~~------~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~ 394 (541)
+|++||++||+||+|.... .........|++ |++|.+++ | ...|++++++++++.+...........++.
T Consensus 256 l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~-G-~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~ 331 (451)
T 3oks_A 256 WCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI--VTAKGIAG-G-LPLSAVTGRAEIMDSPHVSGLGGTYGGNPI 331 (451)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHTCSCTTSBCCSSSSCHH
T ss_pred HHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee--eehhhhhC-C-cceEEEEECHHHHhhhcCCCcCCCCCCCHH
Confidence 9999999999999976321 122223345766 67899987 4 457888889888877654333333345677
Q ss_pred HHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC----
Q 009167 395 AAYLIIRGMKTLHL--RVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---- 464 (541)
Q Consensus 395 ~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~----~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~---- 464 (541)
.++.++..++.+.. ..++..++.+++.+.|+ ++|.+..+ ++.|.++++++..
T Consensus 332 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~G~~~~~~~~~~~~~ 393 (451)
T 3oks_A 332 ACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDV------------------RGRGAMIAMELVKAGTT 393 (451)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEEBSTTSC
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE------------------EEeeEEEEEEEecCccC
Confidence 66666666664432 23444444555555444 34443322 3467899999842
Q ss_pred --CHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCH----HHHHHHHHHHH
Q 009167 465 --DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDF----EDLKADVLQAL 538 (541)
Q Consensus 465 --~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~----edli~dL~~AL 538 (541)
.......+.+.+...|+.+..++. ..+.+||++....+ ++.++.|.++|
T Consensus 394 ~~~~~~~~~~~~~l~~~Gv~v~~~~~-------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 448 (451)
T 3oks_A 394 EPDADLTKALCAGAHAAGVIVLSCGT-------------------------YGNVVRFLPPLSIGDDLLNEGLDVLEEVL 448 (451)
T ss_dssp CBCHHHHHHHHHHHHHTTEECEEECT-------------------------TSCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCcEEecCCC-------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 334566777777666665544321 24689998776543 44455555555
Q ss_pred h
Q 009167 539 H 539 (541)
Q Consensus 539 ~ 539 (541)
+
T Consensus 449 ~ 449 (451)
T 3oks_A 449 R 449 (451)
T ss_dssp H
T ss_pred h
Confidence 4
No 205
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.83 E-value=2.4e-19 Score=194.64 Aligned_cols=214 Identities=13% Similarity=0.124 Sum_probs=151.2
Q ss_pred HHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhcc--------CC-----C-EEEEcCCCCcchHHHHHhhcccCCe
Q 009167 214 VVEEKMSALEGAE----STVIMASGMSASTVMLLALVP--------AG-----G-HIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 214 ~Le~~LA~l~g~e----~~i~~sSGs~Ai~~al~all~--------pG-----d-~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
++.+.+++++|.+ ..+++++|++|+.+++.++.. +| + +|+++.+.|.++...+.. +. .|.
T Consensus 136 ~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~-~g-~g~ 213 (504)
T 2okj_A 136 ITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAA-LG-FGT 213 (504)
T ss_dssp HHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHH-TT-SCG
T ss_pred HHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHH-cC-CCc
Confidence 4446668899865 467788889999999887642 56 6 799999999887655432 22 243
Q ss_pred -EEEEeCCC-----CHHHHHHhccCC-----CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc---
Q 009167 276 -TATVIDPA-----DMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (541)
Q Consensus 276 -~v~~vd~~-----d~e~Le~al~~~-----~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~--- 341 (541)
+++.++.+ |+++|++++++. ++++|++++|+||+|.+.|+++|+++|+++|+++|+|++|+.+...
T Consensus 214 ~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~ 293 (504)
T 2okj_A 214 DNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRK 293 (504)
T ss_dssp GGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTT
T ss_pred ccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHh
Confidence 67777654 899999998641 3899999999999999999999999999999999999998765432
Q ss_pred --cccc--cCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHH-hhhc-CC-------------------CchHHH
Q 009167 342 --KALS--LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNL-HHVL-GG-------------------ALNPNA 395 (541)
Q Consensus 342 --~~~~--~gaDivv~S~sK~lgg~gd~~gG~lv~~~-~li~~l~~~-~~~~-G~-------------------~~s~~~ 395 (541)
..+. .++|+++.++||+++++.+ +|+++.++ ++++..... .... +. ......
T Consensus 294 ~~~~~~g~~~~D~i~~~~hK~~~~p~~--~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~ 371 (504)
T 2okj_A 294 HRHKLNGIERANSVTWNPHKMMGVLLQ--CSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFK 371 (504)
T ss_dssp TGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHH
T ss_pred hHhhcCCcccCCEEEECchhhcCCCcc--eEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHH
Confidence 1122 2689999999999986542 57777665 455543211 1111 10 112444
Q ss_pred HHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCce
Q 009167 396 AYLIIRGM--KTLHLRVQQQNSTALRMAKILEAHPKVK 431 (541)
Q Consensus 396 a~l~l~~l--~tl~~r~~~~~~~a~~la~~L~~~p~v~ 431 (541)
.|++++.+ +.+..++++..++++++.+.|++.|.++
T Consensus 372 ~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 409 (504)
T 2okj_A 372 FWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFE 409 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 55544444 3455567777788999999998877764
No 206
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.83 E-value=7.2e-19 Score=187.32 Aligned_cols=279 Identities=15% Similarity=0.157 Sum_probs=178.9
Q ss_pred hhHHHHHHHHHHHhCCCcE--EEeCCHHHHHHHHHHH-hccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC---
Q 009167 210 PTTVVVEEKMSALEGAEST--VIMASGMSASTVMLLA-LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~e~~--i~~sSGs~Ai~~al~a-ll~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
+..+++++.+++++|.+.. +++++|++++..++.+ .+++||+|+++.++|+++...+...++..|++++.++..
T Consensus 108 ~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~ 187 (438)
T 1wyu_A 108 QATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGR 187 (438)
T ss_dssp HHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTB
T ss_pred HHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCcCCc
Confidence 4577899999999998633 5556666443444333 357899999999999998777766566679999888742
Q ss_pred -CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCC-CCCCCcccccccCCcEEEECCcc----
Q 009167 284 -DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATK---- 357 (541)
Q Consensus 284 -d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea-~a~~~~~~~~~~gaDivv~S~sK---- 357 (541)
|+++ +++ +|++|++++| ||||.+.|+++|+++|+++|+++|+|.. .+.+....+..+|+|+++.|.+|
T Consensus 188 ~d~~~----i~~-~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~ 261 (438)
T 1wyu_A 188 TPLPE----VGE-EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLP 261 (438)
T ss_dssp CCCCC----CCT-TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCC
T ss_pred cCHHH----hCC-CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCC
Confidence 3333 665 5999999999 9999999999999999999999997743 22222223345789999999555
Q ss_pred -ccCCCCCceEEEEEeChHHHHHHHHH-------------------------hhhcCCC-c---hHHHH---HHHHHhH-
Q 009167 358 -FIGGHNDVLAGSISGSGKLVTQIRNL-------------------------HHVLGGA-L---NPNAA---YLIIRGM- 403 (541)
Q Consensus 358 -~lgg~gd~~gG~lv~~~~li~~l~~~-------------------------~~~~G~~-~---s~~~a---~l~l~~l- 403 (541)
+++|++ +|++++++++++.+... +...+.. . ....+ +..+..+
T Consensus 262 ~~~~Gp~---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~ 338 (438)
T 1wyu_A 262 MGFGGPH---FGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALG 338 (438)
T ss_dssp CGGGCSC---CEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHH
T ss_pred ccCCCCC---eeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhC
Confidence 344543 68999988776554210 1111211 1 12211 2112222
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCee
Q 009167 404 -KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 482 (541)
Q Consensus 404 -~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~ia 482 (541)
+.+....++..++++++.+.|++.++++ +..|. + .-.++.|.++. ....+.+.|...++.
T Consensus 339 ~~g~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~----~-----------~~~~~~~~~~~---~~~~~~~~L~~~gi~ 399 (438)
T 1wyu_A 339 PEGLREVALKSVEMAHKLHALLLEVPGVR-PFTPK----P-----------FFNEFALALPK---DPEAVRRALAERGFH 399 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTCE-ECSCS----S-----------BCSEEEEECSS---CHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeE-ECCCC----C-----------eEEEEEEeCCC---CHHHHHHHHHHCCce
Confidence 2244455566678888889998876654 32221 1 12345565532 234555555544655
Q ss_pred c--ccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 483 P--SFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 483 v--S~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
+ ..|..+ .++.||||++..++++.++.+.++|++
T Consensus 400 v~~~~~~~~------------------------~~~~lRis~~~~~t~edi~~~~~~l~~ 435 (438)
T 1wyu_A 400 GATPVPREY------------------------GENLALFAATELHEEEDLLALREALKE 435 (438)
T ss_dssp CCEECCTTS------------------------CSSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred ecccccccc------------------------CCCeEEEEecccCCHHHHHHHHHHHHH
Confidence 4 223210 257899999987777777777777764
No 207
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.83 E-value=8.9e-19 Score=187.82 Aligned_cols=291 Identities=12% Similarity=0.106 Sum_probs=182.9
Q ss_pred CccCCCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhh-------
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV------- 269 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~~~------- 269 (541)
+.+.++.++...+|+++|+++++. +.+++++||++|+..+++... ..++.|++.++.|++........
T Consensus 99 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 178 (453)
T 4ffc_A 99 TCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPY 178 (453)
T ss_dssp CTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTT
T ss_pred cccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCccc
Confidence 455678889999999999999863 568888999999999997654 35689999999998754322111
Q ss_pred ---cccCCeEEEEeCCC----C-------------HHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhC
Q 009167 270 ---LPKMGITATVIDPA----D-------------MEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (541)
Q Consensus 270 ---l~~~Gi~v~~vd~~----d-------------~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~ 325 (541)
.......+..++.. | ++.|++++.++++++|++|..++..|.+.+ +++|.++|++|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~ 258 (453)
T 4ffc_A 179 KSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASEN 258 (453)
T ss_dssp TTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHH
T ss_pred ccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHc
Confidence 01111133334322 2 366777665444667777555555567766 89999999999
Q ss_pred CCEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHH
Q 009167 326 GAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI 399 (541)
Q Consensus 326 gi~lIvDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~ 399 (541)
|++||+||+|... .. ........|++ +++|.+++ | ...|++++++++++.+...........++..+..+
T Consensus 259 ~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~--t~sK~~~~-G-~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa 334 (453)
T 4ffc_A 259 GVVFIADEVQTGFARTGAWFASEHEGIVPDIV--TMAKGIAG-G-MPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAAA 334 (453)
T ss_dssp TCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT-T-SSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHH
T ss_pred CCEEEEecCccCCCcccccchhhhcCCCcchH--hhhhhhcC-C-cCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHHH
Confidence 9999999997642 11 12223345665 47899987 4 45788889988888776433322233466666666
Q ss_pred HHhHHHHH--HHHHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC------CHH
Q 009167 400 IRGMKTLH--LRVQQQNSTALRMAKILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG------DLT 467 (541)
Q Consensus 400 l~~l~tl~--~r~~~~~~~a~~la~~L~----~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~------~~~ 467 (541)
+..++.+. ...++..++.+++.+.|+ .+|.+..+ ++.|.+++|++.. ...
T Consensus 335 ~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~ 396 (453)
T 4ffc_A 335 VAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV------------------RGRGAMLAIEIVKPGTLEPDAA 396 (453)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE------------------EEETTEEEEEEBCTTSCCBCHH
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE------------------EeeceEEEEEEecCcccCCCHH
Confidence 66665432 223344444445444443 44443322 3357899999842 234
Q ss_pred HHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCC----HHHHHHHHHHHHh
Q 009167 468 ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED----FEDLKADVLQALH 539 (541)
Q Consensus 468 ~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~----~edli~dL~~AL~ 539 (541)
...++.+.+...|+.+..++. ..+.+||++.... .++.++.|.++|+
T Consensus 397 ~~~~~~~~l~~~Gv~v~~~~~-------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 447 (453)
T 4ffc_A 397 LTKSIAAEALSQGVLILTCGT-------------------------FGNVIRLLPPLVIGDDLLDEGITALSDIIR 447 (453)
T ss_dssp HHHHHHHHHHHTTEECCEECT-------------------------TSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEecCCC-------------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 566777777666765544321 2468999877543 4445555555554
No 208
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.82 E-value=2.9e-19 Score=193.69 Aligned_cols=241 Identities=11% Similarity=0.147 Sum_probs=157.8
Q ss_pred CCccCCCCchhHHHH----HHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh----c---------cC------CC-EEE
Q 009167 201 SFEYGRYGNPTTVVV----EEKMSALEGA---ESTVIMASGMSASTVMLLAL----V---------PA------GG-HIV 253 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~L----e~~LA~l~g~---e~~i~~sSGs~Ai~~al~al----l---------~p------Gd-~Vl 253 (541)
.+.|+. .|...++ +++|++++|. +..+++++|++|+.+++.+. + ++ || +|+
T Consensus 129 ~~~~~~--~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~ 206 (497)
T 2qma_A 129 MDSWDQ--ASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIV 206 (497)
T ss_dssp TTCGGG--CHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEE
T ss_pred ccchhh--ChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEE
Confidence 344543 3444444 5559999987 45778888899999988863 3 13 46 899
Q ss_pred EcCCCCcchHHHHHhhcccCCe-EEEEeCCC-----CHHHHHHhccCC---Cce--EEEEeCCCCCCCccccHHHHHHHH
Q 009167 254 TTTDCYRKTRIFIETVLPKMGI-TATVIDPA-----DMEGLEAALNNN---NVS--LFFTESPTNPFLRCVDVKLVSDLC 322 (541)
Q Consensus 254 v~~~~y~~~~~~~~~~l~~~Gi-~v~~vd~~-----d~e~Le~al~~~---~tk--lV~lesP~NPtG~i~dl~~Ia~la 322 (541)
++...|.+....+. .+. .|. +++.++.+ |+++|+++++++ .++ +|+++.++|+||.+.|+++|+++|
T Consensus 207 ~s~~~h~s~~~~~~-~~g-~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~ 284 (497)
T 2qma_A 207 CSKKSHFTVQKSAS-WMG-LGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMA 284 (497)
T ss_dssp EETTSCTHHHHHHH-HTT-SCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred ECCCchHHHHHHHH-HcC-CCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 99999988765443 222 133 56667654 889999988642 134 888899999999999999999999
Q ss_pred HhCCCEEEEeCCCCCCCcccc-----ccc-CCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhc-C------
Q 009167 323 HKKGAIVCIDGTFATPLNQKA-----LSL-GADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL-G------ 388 (541)
Q Consensus 323 ~~~gi~lIvDea~a~~~~~~~-----~~~-gaDivv~S~sK~lgg~gd~~gG~lv~~-~~li~~l~~~~~~~-G------ 388 (541)
++||+++|+|++|+.+..... ... ++|+++.|+||+++++.+ .|+++.+ +..++.+......+ +
T Consensus 285 ~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~--~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~ 362 (497)
T 2qma_A 285 VKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTIS--CGALLVNDKSNFKFLLHHADYLNREHDELP 362 (497)
T ss_dssp HHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSS--CEEEEESCGGGGGGGCC-------------
T ss_pred HHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcc--eEEEEEeCHHHHHHhcCCchhcCCccccCC
Confidence 999999999999876543211 112 679999999998887653 4666554 44333321100000 0
Q ss_pred ----CC------chHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCccc
Q 009167 389 ----GA------LNPNAAYLIIRGM--KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGG 456 (541)
Q Consensus 389 ----~~------~s~~~a~l~l~~l--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~ 456 (541)
.. ......|.+++.+ +.+..++++..++++++.+.|++.+.++-+..| .++
T Consensus 363 ~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~ 425 (497)
T 2qma_A 363 NLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEP-----------------SLS 425 (497)
T ss_dssp -------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCC-----------------SSS
T ss_pred CccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCC-----------------Cce
Confidence 00 0122334444432 445566777788899999999987766432222 246
Q ss_pred EEEEEEcC
Q 009167 457 VVSFEVDG 464 (541)
Q Consensus 457 ~vsf~l~~ 464 (541)
+++|.+.+
T Consensus 426 ~v~f~~~~ 433 (497)
T 2qma_A 426 TVLFRATH 433 (497)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 89999864
No 209
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.82 E-value=3.4e-19 Score=189.02 Aligned_cols=258 Identities=14% Similarity=0.136 Sum_probs=169.4
Q ss_pred CCchhHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHH----------hhcccC
Q 009167 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIE----------TVLPKM 273 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g-~e~~i~~sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~----------~~l~~~ 273 (541)
|+++...+|+++|+++++ .+.+++++||++|+..+++... ..+++||+.++.|++...... ......
T Consensus 90 ~~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 169 (429)
T 4e77_A 90 APTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSP 169 (429)
T ss_dssp SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCT
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcC
Confidence 678899999999999985 4678888999999999998542 457889999999988542110 000011
Q ss_pred C------eEEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC---
Q 009167 274 G------ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (541)
Q Consensus 274 G------i~v~~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~--- 338 (541)
+ ..+..++..|+++|++++++ .++++|+++..++++|.+.+ +++|.++|++||++||+||+|...
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g 249 (429)
T 4e77_A 170 GVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVA 249 (429)
T ss_dssp TSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTB
T ss_pred CCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccC
Confidence 1 23455667799999999863 24788888666666788888 999999999999999999998733
Q ss_pred Cc--ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-hcC--CCchHHHHHHHHHhHHHH--HHHHH
Q 009167 339 LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTL--HLRVQ 411 (541)
Q Consensus 339 ~~--~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G--~~~s~~~a~l~l~~l~tl--~~r~~ 411 (541)
.. ........|++ |++|.+++ | ..+|++++++++++.+..... ..+ ...++..+..++..++.+ +...+
T Consensus 250 ~~~~~~~~~~~pdi~--t~sK~~~~-G-~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 325 (429)
T 4e77_A 250 LAGAQDYYHVIPDLT--CLGKIIGG-G-MPVGAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYE 325 (429)
T ss_dssp TTCHHHHTTCCCSEE--EEEGGGGT-T-SCCEEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHH
T ss_pred cchHHHhcCCCCCee--eecccccC-C-CCeEEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 11 12223345765 68899985 3 467899999988877654211 112 235666666666666644 23344
Q ss_pred HHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-------------HHHHHHHHH
Q 009167 412 QQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------------LTATIKFID 474 (541)
Q Consensus 412 ~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-------------~~~~~~~l~ 474 (541)
+..++.+++.+.|++ ++.+.. .++.|.+++++++.. .....++.+
T Consensus 326 ~~~~~~~~l~~~L~~~~~~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (429)
T 4e77_A 326 TLTELTDSLATGLRHAAKEENIPLV------------------VNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFH 387 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCE------------------EEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceE------------------EEEeeeEEEEEEccCcccccccccccccHHHHHHHHH
Confidence 555556666665544 222111 134688999998643 133466777
Q ss_pred HccCcCeecccC
Q 009167 475 ALKIPYIAPSFG 486 (541)
Q Consensus 475 ~L~~~~iavS~G 486 (541)
.|...|+.+..+
T Consensus 388 ~l~~~Gi~v~~~ 399 (429)
T 4e77_A 388 LMLEEGVYLAPS 399 (429)
T ss_dssp HHHHTTEECCSS
T ss_pred HHHHCCeEEeec
Confidence 776667766654
No 210
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.82 E-value=1.2e-18 Score=187.86 Aligned_cols=288 Identities=13% Similarity=0.132 Sum_probs=186.5
Q ss_pred CccCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHhh--
Q 009167 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV-- 269 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all~--------pGd~Vlv~~~~y~~~~~~~~~~-- 269 (541)
+.+.++.++...+|+++|+++.+. +.+++++||++|+..+++.+.. ++++||+.++.|++........
T Consensus 91 ~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~ 170 (472)
T 3hmu_A 91 NTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGG 170 (472)
T ss_dssp CSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSC
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccC
Confidence 445577889999999999999864 5788889999999999988764 4689999999998743221111
Q ss_pred -------cccCCeEEEEeCCC---------C--------HHHHHHhccC---CCceEEEEeCCCCCCCcccc----HHHH
Q 009167 270 -------LPKMGITATVIDPA---------D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLV 318 (541)
Q Consensus 270 -------l~~~Gi~v~~vd~~---------d--------~e~Le~al~~---~~tklV~lesP~NPtG~i~d----l~~I 318 (541)
+. ....+..++.. | +++|++++++ +++++|++|.++|++|.+.+ +++|
T Consensus 171 ~~~~~~~~~-~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l 249 (472)
T 3hmu_A 171 MAGMHAQSG-LIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEI 249 (472)
T ss_dssp CHHHHHTTC-CCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHH
T ss_pred ChhhccccC-CCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHH
Confidence 11 11123333311 2 7888888851 24889999999999999887 9999
Q ss_pred HHHHHhCCCEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcC--CC
Q 009167 319 SDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG--GA 390 (541)
Q Consensus 319 a~la~~~gi~lIvDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G--~~ 390 (541)
.++|++||++||+||+|... .. ........|+++ ++|.+++++ ...|++++++++++.+.......+ ..
T Consensus 250 ~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t--~sK~l~gg~-~plG~v~~~~~i~~~~~~~~~~~~~t~~ 326 (472)
T 3hmu_A 250 QRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMT--IAKGLSSGY-APIGGSIVCDEVAHVIGKDEFNHGYTYS 326 (472)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEE--ECGGGTTTS-SCCEEEEEEHHHHHHHTTSCBCCCCTTT
T ss_pred HHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceee--echhhhcCC-cceEEEEECHHHHHhcccCCccccCCCC
Confidence 99999999999999997642 11 122234467776 679998753 346888889999888732111122 23
Q ss_pred chHHHHHHHHHhHHHHH--HHHHHHH-HHHHHHHHHHHhC---CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC
Q 009167 391 LNPNAAYLIIRGMKTLH--LRVQQQN-STALRMAKILEAH---PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~--~r~~~~~-~~a~~la~~L~~~---p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~ 464 (541)
.++..+..++..++.+. ...++.. ++.+++.+.|++. |.+.. .++.|.++.|++..
T Consensus 327 ~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~------------------vr~~G~~~~i~~~~ 388 (472)
T 3hmu_A 327 GHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGE------------------AKIVGMMASIALTP 388 (472)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEE------------------EEEETTEEEEEECS
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEE------------------EEecCceEEEEEec
Confidence 45666666666666543 2344455 5566666666542 22222 23468899999864
Q ss_pred C-----------HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC----CHHH
Q 009167 465 D-----------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFED 529 (541)
Q Consensus 465 ~-----------~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e----~~ed 529 (541)
+ ......+.+.|...|+.+..+ | +.|||+..+- +.+.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-------------------------g---~~iRi~p~~~~t~e~i~~ 440 (472)
T 3hmu_A 389 NKASRAKFASEPGTIGYICRERCFANNLIMRHV-------------------------G---DRMIISPPLVITPAEIDE 440 (472)
T ss_dssp CGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEE-------------------------T---TEEEECCCTTCCHHHHHH
T ss_pred CccccccccchhHHHHHHHHHHHHHCCcEEEec-------------------------C---CEEEEECCCCCCHHHHHH
Confidence 3 122455666655445433221 1 6799995543 4455
Q ss_pred HHHHHHHHHh
Q 009167 530 LKADVLQALH 539 (541)
Q Consensus 530 li~dL~~AL~ 539 (541)
+++.|+++|+
T Consensus 441 ~l~~l~~~l~ 450 (472)
T 3hmu_A 441 MFVRIRKSLD 450 (472)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5666666554
No 211
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.82 E-value=4e-19 Score=201.85 Aligned_cols=216 Identities=13% Similarity=0.074 Sum_probs=154.6
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-
Q 009167 206 RYGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~- 283 (541)
..+.....++++.+++++|.+..+++++|+ +|+.+++.+++++||+|+++.++|.+....+ ...|+++++++..
T Consensus 201 ~~~~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~----~~~G~~~v~v~~~~ 276 (755)
T 2vyc_A 201 LDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGL----MLTGAKPVYMVPSR 276 (755)
T ss_dssp TTTCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHH----HHHCCEEEEECCCB
T ss_pred ccCccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHH----HHcCCEEEEEeCCC
Confidence 334567889999999999998888889997 8999999999999999999999999876544 2347888777531
Q ss_pred --------------CHHHHHHhccCC-Cce--------EEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCc
Q 009167 284 --------------DMEGLEAALNNN-NVS--------LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN 340 (541)
Q Consensus 284 --------------d~e~Le~al~~~-~tk--------lV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~ 340 (541)
|+++|+++++++ +++ +|++++| ||+|.+.|+++|+++|+++|++||+|++|+....
T Consensus 277 ~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~ 355 (755)
T 2vyc_A 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYAR 355 (755)
T ss_dssp CTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGG
T ss_pred CccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcc
Confidence 789999998642 244 8999998 6999999999999999999999999999875432
Q ss_pred c-------cccccC--CcE------EEECCccccCCCCCceEEEEEeChH---H-HHHHHHHhhhc-CCCchHHHHHHHH
Q 009167 341 Q-------KALSLG--ADL------VLHSATKFIGGHNDVLAGSISGSGK---L-VTQIRNLHHVL-GGALNPNAAYLII 400 (541)
Q Consensus 341 ~-------~~~~~g--aDi------vv~S~sK~lgg~gd~~gG~lv~~~~---l-i~~l~~~~~~~-G~~~s~~~a~l~l 400 (541)
. .+. .+ +|+ ++.|+||+++|+. .+|+++.+++ + ...+......+ .++++......+.
T Consensus 356 ~~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~~--~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~ 432 (755)
T 2vyc_A 356 FNPIYADHYAM-RGEPGDHNGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASND 432 (755)
T ss_dssp GCGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSSSCCT--TCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHH
T ss_pred cCcccCCcchh-cCCcCCccCCCeEEEECccccccCcC--CeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 2 222 46 676 9999999998765 3677766443 2 23333322222 2333332222212
Q ss_pred HhHHH-----HHHHHHHHHHHHHHHHHHHHhCCC
Q 009167 401 RGMKT-----LHLRVQQQNSTALRMAKILEAHPK 429 (541)
Q Consensus 401 ~~l~t-----l~~r~~~~~~~a~~la~~L~~~p~ 429 (541)
.+++. ...++++..++++++.+.|++.+.
T Consensus 433 aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 433 VAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp HHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 22221 345667777788888888876543
No 212
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.82 E-value=7.3e-19 Score=188.16 Aligned_cols=281 Identities=14% Similarity=0.091 Sum_probs=178.1
Q ss_pred CCCCchhHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHhc---c-----------CCCEEEEcCCCCcchHHHH-
Q 009167 205 GRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV---P-----------AGGHIVTTTDCYRKTRIFI- 266 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g---~e~~i~~sSGs~Ai~~al~all---~-----------pGd~Vlv~~~~y~~~~~~~- 266 (541)
.+|.++...+++++|+++++ .+++++++||++|+..+++.+. . +||+||+.++.|++.....
T Consensus 96 ~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~ 175 (449)
T 2cjg_A 96 SDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTL 175 (449)
T ss_dssp TTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGG
T ss_pred cccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchh
Confidence 46778889999999999985 3578888889999999987542 2 2899999999998743211
Q ss_pred ---------HhhcccCCeEEEEeCCCC--H-------------HHHHHhcc--CCCceEEEEeCCCCCCCcccc----HH
Q 009167 267 ---------ETVLPKMGITATVIDPAD--M-------------EGLEAALN--NNNVSLFFTESPTNPFLRCVD----VK 316 (541)
Q Consensus 267 ---------~~~l~~~Gi~v~~vd~~d--~-------------e~Le~al~--~~~tklV~lesP~NPtG~i~d----l~ 316 (541)
+.....+...+.+++..| . ++|+++++ ..++++|+++.++||+|.+.+ ++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~ 255 (449)
T 2cjg_A 176 SLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFA 255 (449)
T ss_dssp GTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHH
T ss_pred hhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHH
Confidence 111111122455565555 3 33888885 125899999887899998777 99
Q ss_pred HHHHHHHhCCCEEEEeCCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH-----Hhh
Q 009167 317 LVSDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-----LHH 385 (541)
Q Consensus 317 ~Ia~la~~~gi~lIvDea~a~~-~~-----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~-----~~~ 385 (541)
+|.++|++||++||+||+|... .. ........|++ +++|.+ + .|++++++++++.+.. ...
T Consensus 256 ~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l--~----iG~~~~~~~~~~~l~~~~~~~~~~ 327 (449)
T 2cjg_A 256 AMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV--AFGKKT--Q----VCGVMAGRRVDEVADNVFAVPSRL 327 (449)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGG--S----SEEEEECGGGGGSTTCTTTSTTSS
T ss_pred HHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEE--EecCcc--c----EEEEEECHHHhhhhhhcccCCccc
Confidence 9999999999999999998742 11 12223456776 577998 2 4777788887765321 111
Q ss_pred hcCCCchHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHh----CCC-ceEEeCCCCCCCchhhhHhhhccCcccEE
Q 009167 386 VLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA----HPK-VKRVHYPGLKSHPEHHIATQQMTGFGGVV 458 (541)
Q Consensus 386 ~~G~~~s~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~----~p~-v~~v~~P~l~s~p~~~l~~~~~~g~g~~v 458 (541)
......++..+..+...++.+. ...++..++.+++.+.|++ +|. +..+ ++.|+++
T Consensus 328 ~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~------------------~~~g~~~ 389 (449)
T 2cjg_A 328 NSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDP------------------RGRGLMC 389 (449)
T ss_dssp CCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE------------------EEETTEE
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE------------------eeccEEE
Confidence 1112235565555555555432 2334555666677776654 232 2221 2357899
Q ss_pred EEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHH----HHHHHH
Q 009167 459 SFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFE----DLKADV 534 (541)
Q Consensus 459 sf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~e----dli~dL 534 (541)
+|++++ ......+.+.|...++.+..+ .++.|||++++..++ ..++.|
T Consensus 390 ~~~~~~-~~~~~~~~~~l~~~Gv~v~~~---------------------------g~~~iRi~~~~~~t~e~i~~~l~~l 441 (449)
T 2cjg_A 390 AFSLPT-TADRDELIRQLWQRAVIVLPA---------------------------GADTVRFRPPLTVSTAEIDAAIAAV 441 (449)
T ss_dssp EEECSS-HHHHHHHHHHHHHTTEECEEE---------------------------TTTEEEECCCTTCCHHHHHHHHHHH
T ss_pred EEEECC-hHHHHHHHHHHHHCCeEEecC---------------------------CCCEEEEECCCCCCHHHHHHHHHHH
Confidence 999864 234556777665556554432 146899987765444 444455
Q ss_pred HHHHh
Q 009167 535 LQALH 539 (541)
Q Consensus 535 ~~AL~ 539 (541)
.++++
T Consensus 442 ~~~l~ 446 (449)
T 2cjg_A 442 RSALP 446 (449)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 213
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.82 E-value=1.1e-18 Score=189.96 Aligned_cols=216 Identities=16% Similarity=0.189 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc-------c-CCC------EEEEcCCCCcchHHHHHhhcccCCe
Q 009167 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV-------P-AGG------HIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 212 ~~~Le~~LA~l~g~e--~~i~~sSGs~Ai~~al~all-------~-pGd------~Vlv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
.+++++.|++++|.+ ..+++++|++|+.+++.++. + +|| +|+++...|+++...+.. +. .|.
T Consensus 150 e~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~-~g-~g~ 227 (515)
T 2jis_A 150 EEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAF-LG-LGT 227 (515)
T ss_dssp HHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHH-TT-SCG
T ss_pred HHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHH-cC-CCC
Confidence 456677899999974 57788888999988887753 2 576 899999999887655432 21 233
Q ss_pred -EEEEeCCC-----CHHHHHHhccCC-----CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcccc-
Q 009167 276 -TATVIDPA-----DMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA- 343 (541)
Q Consensus 276 -~v~~vd~~-----d~e~Le~al~~~-----~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~~~- 343 (541)
+++.++.+ |+++|++++++. ++++|++++|+|++|.+.|+++|+++|+++|+++|+|++|+.+....+
T Consensus 228 ~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~ 307 (515)
T 2jis_A 228 DSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQT 307 (515)
T ss_dssp GGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTT
T ss_pred CcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChh
Confidence 67777643 899999998641 389999999999999999999999999999999999999876543211
Q ss_pred ----c-cc-CCcEEEECCccccCCCCCceEEEEEeChH--HHHHHH----HHhhh-----------------cCCCchHH
Q 009167 344 ----L-SL-GADLVLHSATKFIGGHNDVLAGSISGSGK--LVTQIR----NLHHV-----------------LGGALNPN 394 (541)
Q Consensus 344 ----~-~~-gaDivv~S~sK~lgg~gd~~gG~lv~~~~--li~~l~----~~~~~-----------------~G~~~s~~ 394 (541)
+ .. ++|+++.|+||+++++.+ .|+++.+++ ++++.. .+... .+......
T Consensus 308 ~~~~~~g~~~aD~v~~s~hK~l~~p~g--~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al 385 (515)
T 2jis_A 308 HRHLLDGIQRADSVAWNPHKLLAAGLQ--CSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCL 385 (515)
T ss_dssp TGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHH
T ss_pred hHhhcCCCccCCEEEECcccccCCCCC--eeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHH
Confidence 2 22 689999999999986543 477776654 655421 11100 00011234
Q ss_pred HHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCce
Q 009167 395 AAYLIIRGM--KTLHLRVQQQNSTALRMAKILEAHPKVK 431 (541)
Q Consensus 395 ~a~l~l~~l--~tl~~r~~~~~~~a~~la~~L~~~p~v~ 431 (541)
..|++++.+ +.+....++..++++++.+.|++.|+++
T Consensus 386 ~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 424 (515)
T 2jis_A 386 KLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFE 424 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 444444433 3355566777788999999999887764
No 214
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.81 E-value=1.3e-18 Score=185.88 Aligned_cols=254 Identities=17% Similarity=0.150 Sum_probs=160.6
Q ss_pred CCchhHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHH---hccCCCEEEEcCCCCcchHHHHHhhc------c-cCCe
Q 009167 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLA---LVPAGGHIVTTTDCYRKTRIFIETVL------P-KMGI 275 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~-g~e~~i~~sSGs~Ai~~al~a---ll~pGd~Vlv~~~~y~~~~~~~~~~l------~-~~Gi 275 (541)
+.++..+++.+.+++++ +.+.+++++||++|+.++++. +.+ +++||+.++.|++......... . ..|+
T Consensus 94 ~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~ 172 (453)
T 2cy8_A 94 ASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGV 172 (453)
T ss_dssp SSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHHHC-CCEEEEECC-------------------------
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCC
Confidence 56777888888888887 456788889999999999987 544 5788888899987433211100 0 0233
Q ss_pred ------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCc---
Q 009167 276 ------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (541)
Q Consensus 276 ------~v~~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~--- 340 (541)
.+..++..|+++|++++++ .++++|+++.++|++|.+++ +++|.++|++||++||+||++.....
T Consensus 173 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~ 252 (453)
T 2cy8_A 173 LPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVGNH 252 (453)
T ss_dssp ---CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTCTT
T ss_pred CccccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccCch
Confidence 2445566799999999863 24888888777788999888 99999999999999999999874311
Q ss_pred --ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH---HhhhcC--CCchHHHHHHHHHhHHH-H-HHHHH
Q 009167 341 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN---LHHVLG--GALNPNAAYLIIRGMKT-L-HLRVQ 411 (541)
Q Consensus 341 --~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~---~~~~~G--~~~s~~~a~l~l~~l~t-l-~~r~~ 411 (541)
........|++ |++|.+++ | ..+|++++++++++.+.. .....+ ...++..+.++...++. + ....+
T Consensus 253 ~~~~~~~~~~di~--s~sK~l~~-G-~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~~~~~~~ 328 (453)
T 2cy8_A 253 GMQALLDVQPDLT--CLAKASAG-G-LPGGILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCA 328 (453)
T ss_dssp HHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHHHTTHHH
T ss_pred hhhHHhCCCCcEE--EEChhhhC-C-cceEEEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHhhhhHHH
Confidence 11123346765 68899986 3 357999999988876644 111111 23456666666666665 3 33344
Q ss_pred HHHHHHHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-----C-------------HHHH
Q 009167 412 QQNSTALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-----D-------------LTAT 469 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~----p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-----~-------------~~~~ 469 (541)
+..++.+.+.+.|++. +.+.. .++.|.+++++++. . ....
T Consensus 329 ~~~~~~~~l~~~L~~~~~~~~~~~~------------------~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (453)
T 2cy8_A 329 KINDLGQFAREAMNHLFARKGLNWL------------------AYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMI 390 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEE------------------EECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCcEE------------------EEEeeeEEEEEEeccccccccccccccccccccHHHH
Confidence 5556666666666542 22111 12367899999974 1 2235
Q ss_pred HHHHHHccCcCeec
Q 009167 470 IKFIDALKIPYIAP 483 (541)
Q Consensus 470 ~~~l~~L~~~~iav 483 (541)
.++.+.|...++.+
T Consensus 391 ~~l~~~l~~~Gv~v 404 (453)
T 2cy8_A 391 AAMRMALILEGVDI 404 (453)
T ss_dssp HHHHHHHHHTTEEC
T ss_pred HHHHHHHHHCCeEE
Confidence 56666665556554
No 215
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.81 E-value=3.5e-19 Score=190.46 Aligned_cols=295 Identities=17% Similarity=0.136 Sum_probs=175.0
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccC-----C----CEEEEcCCCCcchHHHHHhhcccCCeEEE
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPA-----G----GHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~p-----G----d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~ 278 (541)
..+...+|+++||+++|.+++++++||++|+.+++.+++++ | |+|++. ..|+.++...... .|..+.
T Consensus 72 ~~~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~~---~~~~~~ 147 (467)
T 2oqx_A 72 GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTTQGHSQI---NGCTVR 147 (467)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHHHHHHHH---TTCEEE
T ss_pred cCchhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEec-ccccccchhhhhc---cCccee
Confidence 35678899999999999988999999999999999998888 8 998877 4554433222111 122221
Q ss_pred E------eC------C---CCHHHHHHhccC---CCceEEEEeCCCCCC-Ccccc---HHHHHHHHHhCCCEEEEeCCCC
Q 009167 279 V------ID------P---ADMEGLEAALNN---NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 279 ~------vd------~---~d~e~Le~al~~---~~tklV~lesP~NPt-G~i~d---l~~Ia~la~~~gi~lIvDea~a 336 (541)
. ++ . .|+++|++++++ .++++|++++|+||+ |.+++ +++|+++|++||++||+|++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~ 227 (467)
T 2oqx_A 148 NVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 227 (467)
T ss_dssp ECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTH
T ss_pred eccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhh
Confidence 1 11 1 289999999973 248999999999998 77765 6799999999999999996643
Q ss_pred C--------------CCcccccc----cCCcEEEECCccccCCCCCceEEEEEeChH-HHHH---HHHHhhhcC-----C
Q 009167 337 T--------------PLNQKALS----LGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQ---IRNLHHVLG-----G 389 (541)
Q Consensus 337 ~--------------~~~~~~~~----~gaDivv~S~sK~lgg~gd~~gG~lv~~~~-li~~---l~~~~~~~G-----~ 389 (541)
. +.....+. ..+|+++.|+||+++.+ +||+++++++ +++. ++......+ +
T Consensus 228 ~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (467)
T 2oqx_A 228 AENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVP---MGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYG 304 (467)
T ss_dssp HHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCS---SCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCC
T ss_pred hhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCC---CceEEEecChhHHHHHHHHHHhhhccCCccccc
Confidence 2 11111111 24788899999999755 3688888766 4443 333221111 1
Q ss_pred CchHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc----
Q 009167 390 ALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD---- 463 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl--~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~---- 463 (541)
.........+..+++.. ..++++..++++.+.+.|++. ++..+ |. .|.++++.++
T Consensus 305 ~~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~--~~----------------~~~~~~~~~~~~~~ 365 (467)
T 2oqx_A 305 GLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ--QA----------------GGHAAFVDAGKLLP 365 (467)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE--EE----------------CSSCEEEEHHHHST
T ss_pred chhhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee--cC----------------CceEEEEechhhcc
Confidence 12222211111222322 234555567788888888876 33322 31 2456777763
Q ss_pred C-CHHH--HHHHHHHc-cCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHH
Q 009167 464 G-DLTA--TIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQAL 538 (541)
Q Consensus 464 ~-~~~~--~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e-~~edli~dL~~AL 538 (541)
+ +... ..++.+.| ...++.++.|+.+.....|. +. .......+.|||+++.. .+++.++.+.++|
T Consensus 366 ~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~---~g-------~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l 435 (467)
T 2oqx_A 366 HIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPK---TG-------KQLPCPAELLRLTIPRATYTQTHMDFIIEAF 435 (467)
T ss_dssp TSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTT---TC-------SBCCCSCCEEEECCCTTTSCHHHHHHHHHHH
T ss_pred cCCcccccHHHHHHHHHHhcCceeccccccccccccc---cc-------ccccCccCeEEEEecCCCCCHHHHHHHHHHH
Confidence 1 1111 44556666 66677777654321100010 00 00001247999999976 4444444443333
No 216
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.81 E-value=6.1e-19 Score=187.15 Aligned_cols=286 Identities=15% Similarity=0.119 Sum_probs=185.8
Q ss_pred CCCchhHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhh---------cc-c
Q 009167 206 RYGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETV---------LP-K 272 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g-~e~~i~~sSGs~Ai~~al~all~--pGd~Vlv~~~~y~~~~~~~~~~---------l~-~ 272 (541)
.|+++...+|+++|+++++ .+.+++++||++|+..+++.+.. ++++|++.++.|++........ .. .
T Consensus 89 ~~~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 168 (429)
T 3k28_A 89 GAPTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDS 168 (429)
T ss_dssp SSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCC
T ss_pred CCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCc
Confidence 3678899999999999984 57788888999999999987654 6789999999988632110000 00 0
Q ss_pred CCe------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCc
Q 009167 273 MGI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN 340 (541)
Q Consensus 273 ~Gi------~v~~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~ 340 (541)
.++ .+..++.+|+++|++++++ .++++|++|.++|++|.+.+ +++|.++|++||++||+||+|.....
T Consensus 169 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~ 248 (429)
T 3k28_A 169 PGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRV 248 (429)
T ss_dssp TTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTS
T ss_pred CCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccccc
Confidence 011 3444556689999998862 24788999888888899988 99999999999999999999864311
Q ss_pred -----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-hcC--CCchHHHHHHHHHhHHHH-HHHHH
Q 009167 341 -----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG--GALNPNAAYLIIRGMKTL-HLRVQ 411 (541)
Q Consensus 341 -----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G--~~~s~~~a~l~l~~l~tl-~~r~~ 411 (541)
........|++ +++|.+++ | ...|++++++++++.+..... ..+ ...++..+..++..++.+ +...+
T Consensus 249 g~~~~~~~~~~~~di~--t~sK~~~~-G-~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~ 324 (429)
T 3k28_A 249 AYNCGQGYYGVTPDLT--CLGKVIGG-G-LPVGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLTPESYV 324 (429)
T ss_dssp STTHHHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCCHHHHH
T ss_pred CcchHHHHhCCCCcee--hhhhhhcC-C-CCeEEEEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 11223345665 57899975 3 467899999988877654221 112 234566666555555532 33445
Q ss_pred HHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC------------CHHHHHHHHHH
Q 009167 412 QQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG------------DLTATIKFIDA 475 (541)
Q Consensus 412 ~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~------------~~~~~~~~l~~ 475 (541)
+..++.+++.+.|++ ++.+..+ ++.|.++++++.. +......+.+.
T Consensus 325 ~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (429)
T 3k28_A 325 EFERKAEMLEAGLRKAAEKHGIPHHI------------------NRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYRE 386 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEE------------------EEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCEEE------------------EeeccEEEEEEecCCcccccccccccHHHHHHHHHH
Confidence 555666666666654 2322211 3367888888742 12334566666
Q ss_pred ccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHhh
Q 009167 476 LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALHA 540 (541)
Q Consensus 476 L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~--e~~edli~dL~~AL~~ 540 (541)
|...|+.+..|+ .+.+|+++.. ++.+.+++.|++++++
T Consensus 387 l~~~Gv~v~~~~---------------------------~~~~r~~~~~t~e~i~~~l~~l~~~l~~ 426 (429)
T 3k28_A 387 MVEQGVFLPPSQ---------------------------FEGLFLSTVHSDADIEATIAAAEIAMSK 426 (429)
T ss_dssp HHHTTEECCSST---------------------------TSCBCCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHCCeEEecCC---------------------------CCCEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 665666655432 1235665432 4556667777777664
No 217
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.81 E-value=1.7e-18 Score=187.11 Aligned_cols=256 Identities=16% Similarity=0.184 Sum_probs=174.6
Q ss_pred CCccCCCCchhHHHHHHHH----HHHhCCC------------cEEEeCCHHHHHHHHHHHhcc-----------------
Q 009167 201 SFEYGRYGNPTTVVVEEKM----SALEGAE------------STVIMASGMSASTVMLLALVP----------------- 247 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~L----A~l~g~e------------~~i~~sSGs~Ai~~al~all~----------------- 247 (541)
.+.|. ..|...++|+.+ ++++|.+ ..+++++|++|+..++.+...
T Consensus 107 ~~~~~--~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~ 184 (481)
T 4e1o_A 107 GFTWA--SSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESS 184 (481)
T ss_dssp CSSTT--TCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHH
T ss_pred cCCcC--CCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCccccccc
Confidence 34454 457777777655 5666764 458888999999888875532
Q ss_pred --CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC-----CHHHHHHhccCC-----CceEEEEeCCCCCCCccccH
Q 009167 248 --AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDV 315 (541)
Q Consensus 248 --pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-----d~e~Le~al~~~-----~tklV~lesP~NPtG~i~dl 315 (541)
+++.|+++...|.+...... ..|++++.++.+ |+++|+++|+++ .+.+|+++.++|++|.+.|+
T Consensus 185 ~~~~~~v~~s~~~H~s~~~~~~----~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l 260 (481)
T 4e1o_A 185 LNARLVAYASDQAHSSVEKAGL----ISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCL 260 (481)
T ss_dssp HHTTEEEEEETTSCHHHHHHHH----HHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred ccCCeEEEEcCcchHHHHHHHH----hCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCH
Confidence 57899999999998665442 347888888753 899999998642 16778889999999999999
Q ss_pred HHHHHHHHhCCCEEEEeCCCCCCCcc----cccccC---CcEEEECCccccCCCCCceEEEEEeChHHHHHHHH----Hh
Q 009167 316 KLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLG---ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN----LH 384 (541)
Q Consensus 316 ~~Ia~la~~~gi~lIvDea~a~~~~~----~~~~~g---aDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~----~~ 384 (541)
++|+++|++||+++|+|++|+..... +....| +|.++.++||+++.+.+. +++++.+++++.+... +.
T Consensus 261 ~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~-g~l~~~~~~~l~~~~~~~~~yl 339 (481)
T 4e1o_A 261 SELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDC-TGFWVKDKYKLQQTFSVNPIYL 339 (481)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSC-EEEEESBHHHHHTTTCCCCGGG
T ss_pred HHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCce-EEEEEeCHHHHHHHhcCCchhc
Confidence 99999999999999999998765321 122224 599999999999877532 4445545544332110 00
Q ss_pred hh---------------cCCCchHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhH
Q 009167 385 HV---------------LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIA 447 (541)
Q Consensus 385 ~~---------------~G~~~s~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~ 447 (541)
.. .+........|.+++ +.+.+..++++..++++++.+.|++.|.++-+..|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~----------- 408 (481)
T 4e1o_A 340 RHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKR----------- 408 (481)
T ss_dssp CCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCC-----------
T ss_pred cCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------
Confidence 00 011122344454444 44556777888889999999999988776422111
Q ss_pred hhhccCcccEEEEEEcCCHHHHHHHHHHccCcC
Q 009167 448 TQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY 480 (541)
Q Consensus 448 ~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~ 480 (541)
..++++|.+++......++.+.|...+
T Consensus 409 ------~~~~v~f~~~~~~~~~~~l~~~L~~~g 435 (481)
T 4e1o_A 409 ------HLGLVVFRLKGPNSLTENVLKEIAKAG 435 (481)
T ss_dssp ------CSSEEEEEESSCHHHHHHHHHHHHHHC
T ss_pred ------ceeEEEEEeCCchHHHHHHHHHHHhCC
Confidence 246899999765455667777765433
No 218
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.81 E-value=1.3e-18 Score=184.11 Aligned_cols=217 Identities=16% Similarity=0.087 Sum_probs=142.8
Q ss_pred CCccCCCCchhHHHHHHHHHHHh-CC-------Cc--EEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHh
Q 009167 201 SFEYGRYGNPTTVVVEEKMSALE-GA-------ES--TVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIET 268 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~-g~-------e~--~i~~sSGs~Ai~~al~all~--pGd~Vlv~~~~y~~~~~~~~~ 268 (541)
.+.|+- .....+||+++++++ +. +. .+++++|++|+.+++..++. | |+|++++|+|.+...
T Consensus 65 ~~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~---- 137 (405)
T 3k7y_A 65 EKPYLL--GNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVN---- 137 (405)
T ss_dssp CCCCCT--TSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHH----
T ss_pred CCCCCC--CCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHH----
Confidence 345653 345568899999876 21 22 25555666999999998877 8 999999999988653
Q ss_pred hcccCCeEEEEeCC-------CCHHHHHHhccC-CCceEEEEeCC-CCCCCcccc---HHHHHHHHHhCCCEEEEeCCCC
Q 009167 269 VLPKMGITATVIDP-------ADMEGLEAALNN-NNVSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 269 ~l~~~Gi~v~~vd~-------~d~e~Le~al~~-~~tklV~lesP-~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~a 336 (541)
.++..|.++..++. .|+++|++++++ .++++|++.+| |||||.+++ +++|+++|++||+++|+||+|.
T Consensus 138 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~ 217 (405)
T 3k7y_A 138 MIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQ 217 (405)
T ss_dssp HHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCT
T ss_pred HHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcc
Confidence 34456777777753 278999998863 23688888765 899999998 5578888999999999999987
Q ss_pred CCCccc------cc----cc-CCcEEEECCccccCCCCCceEEEEEe---ChHHHHHHHH----HhhhcCCCchHHHHHH
Q 009167 337 TPLNQK------AL----SL-GADLVLHSATKFIGGHNDVLAGSISG---SGKLVTQIRN----LHHVLGGALNPNAAYL 398 (541)
Q Consensus 337 ~~~~~~------~~----~~-gaDivv~S~sK~lgg~gd~~gG~lv~---~~~li~~l~~----~~~~~G~~~s~~~a~l 398 (541)
...... +. .. ...+++.|+||.|+-.|. +.|++++ ++++++++.. ..+..-...+...+.+
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~Gl-RiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~ 296 (405)
T 3k7y_A 218 GFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGE-RAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRI 296 (405)
T ss_dssp TTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTT-TEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred cccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccc-cceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHH
Confidence 643211 11 11 245889999999985553 4677653 5666655532 2221112223333322
Q ss_pred HHHhH----------HHHHHHHHHHHHHHHHHHHHHH
Q 009167 399 IIRGM----------KTLHLRVQQQNSTALRMAKILE 425 (541)
Q Consensus 399 ~l~~l----------~tl~~r~~~~~~~a~~la~~L~ 425 (541)
+...+ +.+....++..++++.+.+.|+
T Consensus 297 ~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 297 LCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222 2223333445677788888887
No 219
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.81 E-value=5.8e-18 Score=182.79 Aligned_cols=288 Identities=15% Similarity=0.126 Sum_probs=185.4
Q ss_pred CCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHhh------
Q 009167 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETV------ 269 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g--~e~~i~~sSGs~Ai~~al~all~--------pGd~Vlv~~~~y~~~~~~~~~~------ 269 (541)
.+.++...+|+++|+++++ .+.+++++||++|+..+++.+.+ .++.||+.++.|++........
T Consensus 93 ~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~ 172 (476)
T 3i5t_A 93 YMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGN 172 (476)
T ss_dssp TCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGG
T ss_pred ccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhh
Confidence 6788899999999999985 46788889999999999987753 3579999999998854222111
Q ss_pred ---cccCCeEEEEeCC-------C-C--------HHHHHHhccC---CCceEEEEeCCCCCCCcccc----HHHHHHHHH
Q 009167 270 ---LPKMGITATVIDP-------A-D--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 270 ---l~~~Gi~v~~vd~-------~-d--------~e~Le~al~~---~~tklV~lesP~NPtG~i~d----l~~Ia~la~ 323 (541)
.......+.+++. + + +++|++++++ +++++|++|.++|++|.+.+ +++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~ 252 (476)
T 3i5t_A 173 WPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICE 252 (476)
T ss_dssp CTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHH
T ss_pred ccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHH
Confidence 0111112333331 1 1 7888888862 25899999999999998666 999999999
Q ss_pred hCCCEEEEeCCCCCC-C---c--cc-ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-------hhcCC
Q 009167 324 KKGAIVCIDGTFATP-L---N--QK-ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGG 389 (541)
Q Consensus 324 ~~gi~lIvDea~a~~-~---~--~~-~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~-------~~~G~ 389 (541)
+||++||+||++... . . .. ......|+++ ++|.++++ -...|++++++++++.+.... .....
T Consensus 253 ~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t--~sK~l~~G-~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~ 329 (476)
T 3i5t_A 253 KHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIIT--FAKGVTSG-YVPLGGLAISEAVLARISGENAKGSWFTNGYTY 329 (476)
T ss_dssp HTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEE--ECGGGGTT-SSCCEEEEECHHHHHTTSGGGCTTCEECCCCTT
T ss_pred HcCCEEEEEecccCCccccCceeeecccCCCcchhh--hhhhhcCC-CcCeEEEEECHHHHHHHhcCCcccccccccCCC
Confidence 999999999997642 1 1 12 2233467775 67999862 135688889999988876531 11222
Q ss_pred CchHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHH
Q 009167 390 ALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT 467 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~ 467 (541)
..++..+..++..++.+. ...++..++.+++.+.|++... +|.+ ...++.|.+++|++..+..
T Consensus 330 ~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~v----------~~v~~~G~~~~i~~~~~~~ 394 (476)
T 3i5t_A 330 SNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRD-----LPGV----------AETRSVGLVGCVQCLLDPT 394 (476)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTT-----STTE----------EEEEEETTEEEEEECCC--
T ss_pred CcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhc-----CCCe----------EEEEecCceeEEEEecCcc
Confidence 346677666666666543 2345555666677777764311 1211 1124568899999864311
Q ss_pred ----------HHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHH
Q 009167 468 ----------ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKAD 533 (541)
Q Consensus 468 ----------~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----e~~edli~d 533 (541)
....+.+.|...|+.+.. .| +.|||+..+ ++.+++++.
T Consensus 395 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~-------------------------~g---~~iRi~p~l~~t~e~i~~~l~~ 446 (476)
T 3i5t_A 395 RADGTAEDKAFTLKIDERCFELGLIVRP-------------------------LG---DLCVISPPLIISRAQIDEMVAI 446 (476)
T ss_dssp ---CCHHHHHHHHHHHHHHHHTTEECEE-------------------------ET---TEEEECCCTTCCHHHHHHHHHH
T ss_pred ccccccchhHHHHHHHHHHHHCCCEEEe-------------------------cC---CEEEEECCCCCCHHHHHHHHHH
Confidence 245566665544543321 11 689999554 344555666
Q ss_pred HHHHHh
Q 009167 534 VLQALH 539 (541)
Q Consensus 534 L~~AL~ 539 (541)
|+++|+
T Consensus 447 l~~~l~ 452 (476)
T 3i5t_A 447 MRQAIT 452 (476)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
No 220
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.81 E-value=1.7e-18 Score=187.03 Aligned_cols=251 Identities=13% Similarity=0.099 Sum_probs=170.1
Q ss_pred CchhHHHHHHHH----HHHhCCC-----------cEEEeCCHHHHHHHHHHHhc-------------------cCCCEEE
Q 009167 208 GNPTTVVVEEKM----SALEGAE-----------STVIMASGMSASTVMLLALV-------------------PAGGHIV 253 (541)
Q Consensus 208 ~~p~~~~Le~~L----A~l~g~e-----------~~i~~sSGs~Ai~~al~all-------------------~pGd~Vl 253 (541)
..|...++|+.+ ++++|.+ ..+++++|++|+..++.+.. .+++.|+
T Consensus 107 ~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi 186 (475)
T 3k40_A 107 ASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGY 186 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEE
T ss_pred CCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEE
Confidence 467777777654 6777765 47888999999888877642 1356899
Q ss_pred EcCCCCcchHHHHHhhcccCCeEEEEeCC----CCHHHHHHhccCC-----CceEEEEeCCCCCCCccccHHHHHHHHHh
Q 009167 254 TTTDCYRKTRIFIETVLPKMGITATVIDP----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHK 324 (541)
Q Consensus 254 v~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----~d~e~Le~al~~~-----~tklV~lesP~NPtG~i~dl~~Ia~la~~ 324 (541)
++..+|.+..... ...|++++.++. .|+++|+++|++. .+.+|++..++|++|.+.|+++|+++|++
T Consensus 187 ~s~~~H~s~~~~~----~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~ 262 (475)
T 3k40_A 187 CSDQAHSSVERAG----LLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNK 262 (475)
T ss_dssp EETTSCHHHHHHH----HHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred ECCCchHHHHHHH----HHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHH
Confidence 9999999876544 335788888876 4899999998642 15678888999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCcc----ccccc---CCcEEEECCccccCCCCCceEEEEEeChHHH-HHHHH---Hhhh-------
Q 009167 325 KGAIVCIDGTFATPLNQ----KALSL---GADLVLHSATKFIGGHNDVLAGSISGSGKLV-TQIRN---LHHV------- 386 (541)
Q Consensus 325 ~gi~lIvDea~a~~~~~----~~~~~---gaDivv~S~sK~lgg~gd~~gG~lv~~~~li-~~l~~---~~~~------- 386 (541)
||+++|+|++|+.+... ..... .+|.++.++||+++++.+. +++++.+++++ +.+.. +...
T Consensus 263 ~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~-g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~ 341 (475)
T 3k40_A 263 HNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDC-SAMWLKDPSWVVNAFNVDPLYLKHDMQGSAP 341 (475)
T ss_dssp TTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSC-EEEEESSGGGC--------------------
T ss_pred hCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCce-EEEEEeCHHHHHHHhcCCccccCCCcCCCCC
Confidence 99999999998764321 11112 3699999999988866432 44444444432 21110 0000
Q ss_pred --------cCCCchHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCccc
Q 009167 387 --------LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGG 456 (541)
Q Consensus 387 --------~G~~~s~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~ 456 (541)
.+........|.+++ +.+.+..++++..++++++.+.|++.|.++-+..| ..+
T Consensus 342 ~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~-----------------~~~ 404 (475)
T 3k40_A 342 DYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEI-----------------NMG 404 (475)
T ss_dssp -------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCC-----------------BTT
T ss_pred CcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-----------------ceE
Confidence 000112333444443 34456677788889999999999998876533211 246
Q ss_pred EEEEEEcCCHHHHHHHHHHccCcC
Q 009167 457 VVSFEVDGDLTATIKFIDALKIPY 480 (541)
Q Consensus 457 ~vsf~l~~~~~~~~~~l~~L~~~~ 480 (541)
+++|.+++......++.+.|...+
T Consensus 405 iv~f~~~~~~~~~~~l~~~L~~~g 428 (475)
T 3k40_A 405 LVCFRLKGSNERNEALLKRINGRG 428 (475)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCchHHHHHHHHHHHhCC
Confidence 899999765455667777775433
No 221
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.81 E-value=2.7e-18 Score=181.80 Aligned_cols=257 Identities=17% Similarity=0.137 Sum_probs=170.3
Q ss_pred CCchhHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHH--hccCCCEEEEcCCCCcchHHHHHhhc----------ccC
Q 009167 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLA--LVPAGGHIVTTTDCYRKTRIFIETVL----------PKM 273 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~-g~e~~i~~sSGs~Ai~~al~a--ll~pGd~Vlv~~~~y~~~~~~~~~~l----------~~~ 273 (541)
+..+...+++++|++++ +.+.+++++||++|+..+++. .+.+++.||+.++.|++......... ...
T Consensus 89 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~ 168 (424)
T 2e7u_A 89 APSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSA 168 (424)
T ss_dssp SCCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESST
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCC
Confidence 67788999999999999 567788889999999999885 23456889999999987432110000 012
Q ss_pred Ce------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCcc
Q 009167 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQ 341 (541)
Q Consensus 274 Gi------~v~~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~~ 341 (541)
|+ .+..++..|+++|++++++ +++++|+++..++++|.+.+ +++|.++ ++||++||+||+|......
T Consensus 169 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g 247 (424)
T 2e7u_A 169 GVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLA 247 (424)
T ss_dssp TCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSS
T ss_pred CCCCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccc
Confidence 32 3555666799999998862 24777777554555899888 9999999 9999999999998743111
Q ss_pred -----cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-hcC-C-CchHHHHHHHHHhHHHHHH---HH
Q 009167 342 -----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLG-G-ALNPNAAYLIIRGMKTLHL---RV 410 (541)
Q Consensus 342 -----~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G-~-~~s~~~a~l~l~~l~tl~~---r~ 410 (541)
.......|++ |++|.+++ | ..+|++++++++++.+..... ..+ . ..++..+..+...++.+.. ..
T Consensus 248 ~~~~~~~~~~~~di~--s~sK~l~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 323 (424)
T 2e7u_A 248 FGGATELLGLKPDLV--TLGKILGG-G-LPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYY 323 (424)
T ss_dssp TTHHHHHHTCCCSEE--EECGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHH
T ss_pred hhHHHHHhCCCcchh--hhhhhhhC-C-cceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 1122346765 78999996 3 457999999988877654211 112 1 3456666555556654432 44
Q ss_pred HHHHHHHHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC------------HHHHHHHHH
Q 009167 411 QQQNSTALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFID 474 (541)
Q Consensus 411 ~~~~~~a~~la~~L~~~----p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~------------~~~~~~~l~ 474 (541)
++..++.+++.+.|++. +.+.. .++.|++++++++.. .....++.+
T Consensus 324 ~~~~~~~~~l~~~L~~~~~~~~~~~~------------------~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (424)
T 2e7u_A 324 AYLEDLGARLEAGLKEVLKEKGLPHT------------------VNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFH 385 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCE------------------EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceE------------------EEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHH
Confidence 55556667777766552 22111 123578999998641 234567777
Q ss_pred HccCcCeecccC
Q 009167 475 ALKIPYIAPSFG 486 (541)
Q Consensus 475 ~L~~~~iavS~G 486 (541)
.|...++.+..|
T Consensus 386 ~l~~~Gv~v~~~ 397 (424)
T 2e7u_A 386 GLLDRGIYWPPS 397 (424)
T ss_dssp HHHTTTEECCSS
T ss_pred HHHHCCeEEecc
Confidence 776667766654
No 222
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.79 E-value=1.3e-18 Score=182.38 Aligned_cols=281 Identities=12% Similarity=0.045 Sum_probs=187.4
Q ss_pred chhHHHHHHHHHHHhCCC--c-EEEe-CCHHHHHHHHHHHhccC--CCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC
Q 009167 209 NPTTVVVEEKMSALEGAE--S-TVIM-ASGMSASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e--~-~i~~-sSGs~Ai~~al~all~p--Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
....++.|+.|++++|++ . ++++ ++|++++++++..++.+ ||+|++....+.+. . +...+++.|..+++++.
T Consensus 57 ~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~-~-~~~~a~~~G~~~~~~~~ 134 (377)
T 3e77_A 57 AKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSA-K-AAEEAKKFGTINIVHPK 134 (377)
T ss_dssp HHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHH-H-HHHHHTTTSEEEECSCC
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHH-H-HHHHHHHhCCceEEecc
Confidence 346778899999999984 3 4554 46779999999999875 99998887777663 3 33567788988776653
Q ss_pred C-----CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcEEEECCc
Q 009167 283 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSAT 356 (541)
Q Consensus 283 ~-----d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDivv~S~s 356 (541)
+ ++++++.++++ +|++|.+.+-.|.||.++|+ +|+++|+++++|.+++.+ .+.+..+++ +++.|.+
T Consensus 135 ~~~~~~~~~~~~~~i~~-~t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~~--~~~~s~~ 206 (377)
T 3e77_A 135 LGSYTKIPDPSTWNLNP-DASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKFG--VIFAGAQ 206 (377)
T ss_dssp CSSSCSCCCGGGCCCCT-TCSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGCS--EEEEEGG
T ss_pred CCCcCCCCChHHhccCC-CccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchhhcC--EEEEecc
Confidence 2 46667767776 49999998888889999998 478899999999998764 345555554 6889999
Q ss_pred cccCCCCCceEEEEEeChHHHHHHH----------HHh--hhcCCCchHHHHHHHHHhHHHH------HHHHHHHHHHHH
Q 009167 357 KFIGGHNDVLAGSISGSGKLVTQIR----------NLH--HVLGGALNPNAAYLIIRGMKTL------HLRVQQQNSTAL 418 (541)
Q Consensus 357 K~lgg~gd~~gG~lv~~~~li~~l~----------~~~--~~~G~~~s~~~a~l~l~~l~tl------~~r~~~~~~~a~ 418 (541)
|++|+.| .|+++.++++++++. ... ....++++....+.+..+++.+ +.+.++..+.++
T Consensus 207 K~~gp~G---~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~ 283 (377)
T 3e77_A 207 KNVGSAG---VTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQ 283 (377)
T ss_dssp GTTSCTT---CEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccCCCc---cEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 9998777 567776655432211 110 1112344444444333344432 334455556778
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC---CHHHHHHHHHHccCcCeecccCCcccccccC
Q 009167 419 RMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 419 ~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~---~~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
++.+.|++.|++. + .|. .+.+ ..+.+++|.+++ +.+....|++.+...++.+..|..
T Consensus 284 ~l~~~L~~~~g~~-~-~~~---~~~~--------rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~------- 343 (377)
T 3e77_A 284 TIYEIIDNSQGFY-V-CPV---EPQN--------RSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHR------- 343 (377)
T ss_dssp HHHHHHHTSTTSE-E-CCS---CGGG--------BCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCT-------
T ss_pred HHHHHHHhcCCce-e-cCC---CHHH--------cCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCC-------
Confidence 8888888877653 2 221 1111 134579999986 222224677777666766544320
Q ss_pred ccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+.+|+|++..++++.++.|.++|++
T Consensus 344 ------------------~~g~iRiS~~~~~t~edId~l~~al~~ 370 (377)
T 3e77_A 344 ------------------SVGGIRASLYNAVTIEDVQKLAAFMKK 370 (377)
T ss_dssp ------------------TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ------------------cCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 124599999998888888888888764
No 223
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.79 E-value=4.6e-18 Score=179.99 Aligned_cols=258 Identities=16% Similarity=0.157 Sum_probs=169.1
Q ss_pred CCchhHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHh----------hcccC
Q 009167 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIET----------VLPKM 273 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g-~e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~----------~l~~~ 273 (541)
+.++...+|+++|+++++ .+.+++++||++|+.++++.. ...+++||+.++.|++....... .....
T Consensus 89 ~~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 168 (427)
T 3fq8_A 89 APCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSP 168 (427)
T ss_dssp SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCS
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCC
Confidence 478889999999999985 467888889999999998532 23458899988999763211000 00011
Q ss_pred Ce------EEEEeCCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCc-
Q 009167 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN- 340 (541)
Q Consensus 274 Gi------~v~~vd~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~- 340 (541)
|+ .+..++.+|+++|++++++ +++++|+++.++|++|.+.+ +++|.++|++||++||+||+|.....
T Consensus 169 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g 248 (427)
T 3fq8_A 169 GVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIA 248 (427)
T ss_dssp SSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTB
T ss_pred CCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 11 2445566799999999864 25899999999999999999 99999999999999999999874311
Q ss_pred ----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-hcCC--CchHHHHHHHHHhHHHH--HHHHH
Q 009167 341 ----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGG--ALNPNAAYLIIRGMKTL--HLRVQ 411 (541)
Q Consensus 341 ----~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-~~G~--~~s~~~a~l~l~~l~tl--~~r~~ 411 (541)
........|++ |++|.+++ | ..+|++++++++++.+..... ..+. ..++..+..+...++.+ ....+
T Consensus 249 ~~~~~~~~~~~~di~--t~sK~~~~-G-~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~ 324 (427)
T 3fq8_A 249 YGGVQEKFGVTPDLT--TLGKIIGG-G-LPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYE 324 (427)
T ss_dssp TTHHHHHTTCCCSEE--EECGGGGT-T-SSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHH
T ss_pred cchhhHhcCCCCChh--hhhhhhhC-C-cceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHH
Confidence 11223345665 57799985 3 467899999998887754211 1222 23666666666666543 23344
Q ss_pred HHHHHHHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC------------HHHHHHHHHH
Q 009167 412 QQNSTALRMAKILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFIDA 475 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~----p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~------------~~~~~~~l~~ 475 (541)
+..++.+++.+.|++. +.... .++.|.+++|++... ......+.+.
T Consensus 325 ~~~~~~~~~~~~l~~~~~~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (427)
T 3fq8_A 325 YLDQITKRLSDGLLAIAQETGHAAC------------------GGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRG 386 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCE------------------EEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeE------------------EEEeeeEEEEEEecCccccccccccccHHHHHHHHHH
Confidence 5555566666665542 21111 123578899988532 1234566666
Q ss_pred ccCcCeecccC
Q 009167 476 LKIPYIAPSFG 486 (541)
Q Consensus 476 L~~~~iavS~G 486 (541)
|...|+.+..+
T Consensus 387 l~~~Gi~v~~~ 397 (427)
T 3fq8_A 387 MLEQGIYLAPS 397 (427)
T ss_dssp HHHTTEECCSS
T ss_pred HHHCCcEEecC
Confidence 65556665544
No 224
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.77 E-value=6.2e-18 Score=177.84 Aligned_cols=281 Identities=12% Similarity=-0.008 Sum_probs=178.1
Q ss_pred CCCCchhHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEe
Q 009167 205 GRYGNPTTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~e---~~i~~-sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
++......++.|+.||+++|++ +++++ ++|++++++++..++++||+|++....+.+. . +...+++.| +++++
T Consensus 67 ~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~-~-~~~~a~~~G-~v~~v 143 (386)
T 3qm2_A 67 GKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAA-S-AIKEAKKYC-APQII 143 (386)
T ss_dssp ------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHH-H-HHHHHTTTS-EEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHH-H-HHHHHHHhC-CeEEE
Confidence 3334567889999999999984 25553 5788999999999999999987665555553 2 234466778 77776
Q ss_pred CCC--------CHHHHHHhccCCCceEEEEeCCCCCCCcc-ccHHHHHHHHHhCCCEEEEeCCCCCC-CcccccccCCcE
Q 009167 281 DPA--------DMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADL 350 (541)
Q Consensus 281 d~~--------d~e~Le~al~~~~tklV~lesP~NPtG~i-~dl~~Ia~la~~~gi~lIvDea~a~~-~~~~~~~~gaDi 350 (541)
+.+ ++++++.++++ +|++|.+.+..|.||.+ .|+++|. +|+++++|.+++.+ .+.+..+++ +
T Consensus 144 ~~~~~~~G~~~~~~~~~~~l~~-~t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~~--~ 215 (386)
T 3qm2_A 144 DAKITVDGKRAVKPMREWQLSD-NAAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRYG--V 215 (386)
T ss_dssp ECEEEETTEEEECCGGGCCCCT-TCSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGCS--E
T ss_pred ecCcccCCCCCCchHHHhhcCC-CCcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCccccC--E
Confidence 533 45777778877 49999987777888996 8999885 79999999998764 345555554 6
Q ss_pred EEECCccccCCCCCceEEEEEeChHHHHHHHH----------H---hhhcCCCchHHHHHHHHHhHHH------HHHHHH
Q 009167 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRN----------L---HHVLGGALNPNAAYLIIRGMKT------LHLRVQ 411 (541)
Q Consensus 351 vv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~----------~---~~~~G~~~s~~~a~l~l~~l~t------l~~r~~ 411 (541)
++.|.+|++|+.| .|+++.++++++++.. . ....| +++....+.+..+++. ++...+
T Consensus 216 ~~~s~hK~lGP~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~g-Tp~v~~i~~l~~Al~~~~~~gG~~~i~~ 291 (386)
T 3qm2_A 216 IYAGAQKNIGPAG---LTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFN-TPPTFAWYLSGLVFKWLKAQGGVAAMHK 291 (386)
T ss_dssp EEEETTTTTCCTT---EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC--------CCSHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred EEEecccccCCCc---cEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCC-CCcHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 7799999998777 6777777655322110 0 00112 2222222222223332 233334
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccc
Q 009167 412 QQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 412 ~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
+..+.++++.+.|++.+ +. ..+. .+.+ ..+++++|.+++.... ..++..|+..++.+..|..
T Consensus 292 ~~~~l~~~l~~~l~~~~-~~--~~~~---~~~~--------rs~~iv~f~~~~~~~~-~~~~~~L~~~gI~~~~g~~--- 353 (386)
T 3qm2_A 292 INQQKAELLYGVIDNSD-FY--RNDV---AQAN--------RSRMNVPFQLADNTLD-KVFLEESFAAGLHALKGHR--- 353 (386)
T ss_dssp HHHHHHHHHHHHHHTCS-SE--ECCB---CGGG--------BCSSEEEEEESSGGGH-HHHHHHHHHTTEECCBCCT---
T ss_pred HHHHHHHHHHHHHHHCC-Cc--ccCC---CHHH--------cCceEEEEECCCcccc-HHHHHHHHHCCCEEeCCCC---
Confidence 45566677777777652 11 1111 1111 1356899999852222 5677777766776554421
Q ss_pred cccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+.+|+|++..++++.++.|.++|++
T Consensus 354 ----------------------~~~~iRiS~~~~~t~edId~l~~~l~~ 380 (386)
T 3qm2_A 354 ----------------------VVGGMRASIYNAMPIEGVKALTDFMID 380 (386)
T ss_dssp ----------------------TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ----------------------CcCeEEEEcCCCCCHHHHHHHHHHHHH
Confidence 013499999998888888888888875
No 225
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.75 E-value=5.5e-17 Score=169.13 Aligned_cols=275 Identities=11% Similarity=0.006 Sum_probs=177.3
Q ss_pred chhHHHHHHHHHHHhCCC---cEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC--
Q 009167 209 NPTTVVVEEKMSALEGAE---STVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e---~~i~-~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~-- 282 (541)
....++.|+.|++++|++ ++++ +++|++++++++..++ +||++++-...+.+. .+. ..+++.|+++++++.
T Consensus 49 ~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~-~~~-~~a~~~G~~v~~~~~~~ 125 (361)
T 3m5u_A 49 EEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTK-KAI-KEAQILGVNVKTVASSE 125 (361)
T ss_dssp HHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHH-HHH-HHHHHTTCCEEEEEECT
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHH-HHH-HHHHHcCCceEEEeccc
Confidence 356778899999999983 3455 4566799999999998 888642211223332 222 345667887777642
Q ss_pred -----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC-cccccccCCcEEEECCc
Q 009167 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSAT 356 (541)
Q Consensus 283 -----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~-~~~~~~~gaDivv~S~s 356 (541)
.+++. + +++ +|++|.+.+..|.||.++|. +++ +|+++++|.+++.+. +.+.. ..|+++.|.+
T Consensus 126 ~g~~~~~~~~--~-l~~-~t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~--~~d~~~~s~~ 193 (361)
T 3m5u_A 126 ESNFDHIPRV--E-FSD-NADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDFS--NIALFYGGVQ 193 (361)
T ss_dssp TTTSCSCCCC--C-CCT-TSSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCCT--TEEEEEEETT
T ss_pred CcCCCcCChh--h-cCC-CCCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCcc--cCCEEEEech
Confidence 23455 3 776 49999998888888999772 444 499999999987643 33433 3699999999
Q ss_pred cccCCCCCceEEEEEeChHHHHHHHH--------Hh-----hhcCCCchHHHHHHHHHhHHHH------HHHHHHHHHHH
Q 009167 357 KFIGGHNDVLAGSISGSGKLVTQIRN--------LH-----HVLGGALNPNAAYLIIRGMKTL------HLRVQQQNSTA 417 (541)
Q Consensus 357 K~lgg~gd~~gG~lv~~~~li~~l~~--------~~-----~~~G~~~s~~~a~l~l~~l~tl------~~r~~~~~~~a 417 (541)
|++|++| .|+++.++++.+++.. +. ....++++....+.+..+++.+ +...++..+.+
T Consensus 194 K~~gp~G---~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~ 270 (361)
T 3m5u_A 194 KNAGISG---LSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKA 270 (361)
T ss_dssp TTSSCTT---CEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hccCCCc---cEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 9998776 6888888888776643 00 0111334433333333444433 33344555677
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC-CHHHHHHHHHHccCcCeecccCCcccccccCc
Q 009167 418 LRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDALKIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 418 ~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~-~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa 496 (541)
+++.+.|++.+.+.....+ +.+ ...++++|.+++ .... ..++..|+..++.+..|..
T Consensus 271 ~~l~~~L~~~~g~~~~~~~-----~~~--------rs~~ivsf~~~~~~~~~-~~~~~~L~~~gI~~~~g~~-------- 328 (361)
T 3m5u_A 271 TMLYECIDLSNGFYKGHAD-----KKD--------RSLMNVSFNIAKNKDLE-PLFVKEAEEAGMIGLKGHR-------- 328 (361)
T ss_dssp HHHHHHHHTSTTSEEESSC-----GGG--------BCSSEEEEEESSCTTHH-HHHHHHHHHTTEECCBCCT--------
T ss_pred HHHHHHHHHCCCeeeccCC-----HHH--------cCCeEEEEECCCchhhh-HHHHHHHHHCCCEEecCCC--------
Confidence 7788888887755222211 111 135689999985 1122 3567777766776654421
Q ss_pred cccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009167 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli~dL~~AL~~ 540 (541)
..+.+|+|++..++++.++.|.++|++
T Consensus 329 -----------------~~g~iRiS~~~~~t~edId~l~~al~~ 355 (361)
T 3m5u_A 329 -----------------ILGGIRASIYNALNLDQVKTLCEFMKE 355 (361)
T ss_dssp -----------------TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred -----------------ccCeEEEEccCCCCHHHHHHHHHHHHH
Confidence 013599999998888888888888875
No 226
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.57 E-value=2.8e-19 Score=192.41 Aligned_cols=262 Identities=14% Similarity=0.109 Sum_probs=168.1
Q ss_pred CCCchhHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcccCCe--EEEEe
Q 009167 206 RYGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVI 280 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~-g~e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi--~v~~v 280 (541)
+|.++...+|+++|++++ +.+.+++++||++|+..+++.. ...+++||+.+..|++.......-....|+ .+..+
T Consensus 136 ~~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~ 215 (465)
T 2yky_A 136 STQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLG 215 (465)
Confidence 467888999999999999 6678899999999999998864 245689999999998743211100012244 34445
Q ss_pred CCCCHHHHHHhccC--CCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCCCccc-----ccccCCc
Q 009167 281 DPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQK-----ALSLGAD 349 (541)
Q Consensus 281 d~~d~e~Le~al~~--~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~~~~~-----~~~~gaD 349 (541)
+.+|+++|++++++ .++++|++|.++|++|.+.+ +++|.++|++||++||+||++. +.... ......|
T Consensus 216 ~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pD 294 (465)
T 2yky_A 216 VYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISAD 294 (465)
Confidence 66789999999973 25899999887777998887 9999999999999999999988 42111 1112345
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHHHHHH--h---hhcCCCchHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHH
Q 009167 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--H---HVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAK 422 (541)
Q Consensus 350 ivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~--~---~~~G~~~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~ 422 (541)
++ +++|++++ | ...|++++++++++.+... . .......++..+..++..++.+.. ..++..+..+++.+
T Consensus 295 i~--t~sK~lg~-G-~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~ 370 (465)
T 2yky_A 295 LT--TLGKYIGG-G-MSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRA 370 (465)
Confidence 54 78999997 4 4678999999998887651 1 111122345555555555554321 22333344444444
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC------------HHHHHHHHHHccCcCeecccC
Q 009167 423 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 423 ~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~------------~~~~~~~l~~L~~~~iavS~G 486 (541)
.|++.. .+ ++. ....++.|.|++|++.++ .+...+|.+.|...|+.+..+
T Consensus 371 ~L~~~~--~~--~~~----------~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~ 432 (465)
T 2yky_A 371 NLNRIA--VE--NQA----------PLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPR 432 (465)
Confidence 443320 00 110 012346788999988641 112445666665555554443
No 227
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.72 E-value=1.4e-16 Score=178.87 Aligned_cols=213 Identities=12% Similarity=0.125 Sum_probs=153.4
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCC--
Q 009167 207 YGNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~e~~i~~sSGs-~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-- 283 (541)
.+.....++|+.+|+++|++.++++++|+ .|+..++.+++++||+|++++++|.++...+ ...|.++++++..
T Consensus 192 ~~~g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l----~lsGa~pv~v~~~~~ 267 (715)
T 3n75_A 192 DHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLM----MMSDVTPIYFRPTRN 267 (715)
T ss_dssp TTBTHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHH----HHSCCEEEEECCCBC
T ss_pred CCcHHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHH----HHcCCEEEEEecccc
Confidence 35567899999999999999999999996 8999999999999999999999999977543 3457788777642
Q ss_pred -------------CHHHHHHhccCC-Cce---EEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc-----
Q 009167 284 -------------DMEGLEAALNNN-NVS---LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (541)
Q Consensus 284 -------------d~e~Le~al~~~-~tk---lV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~----- 341 (541)
|+++|+++++++ ++| +|++++| |++|.+.|+++|+++|++++ +++|++++.++..
T Consensus 268 ~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~ 344 (715)
T 3n75_A 268 AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE 344 (715)
T ss_dssp TTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGT
T ss_pred ccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCccc
Confidence 789999999742 244 8999999 89999999999999998764 7999998765421
Q ss_pred --cccccC--CcEE---EECCccccCCCCCceEEEEEeChHH-HHHHHHHhhhcC-CCchHHHHHHHHHhHHH-----HH
Q 009167 342 --KALSLG--ADLV---LHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLG-GALNPNAAYLIIRGMKT-----LH 407 (541)
Q Consensus 342 --~~~~~g--aDiv---v~S~sK~lgg~gd~~gG~lv~~~~l-i~~l~~~~~~~G-~~~s~~~a~l~l~~l~t-----l~ 407 (541)
.....| +|++ ++|+||++++.. .+|++..++++ ..++......+. +.+++...+.+..+++. -.
T Consensus 345 ~~~al~~g~~aD~vii~~~S~hKtL~glt--qgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~ 422 (715)
T 3n75_A 345 GKCGMSGGRVEGKVIYETQSTHKLLAAFS--QASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGK 422 (715)
T ss_dssp TSSTTSSSCCTTCEEEEEECHHHHSSCCT--TCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHH
T ss_pred cccccccCcCCCEEEEEEecccccccCCC--CeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccH
Confidence 123333 6765 999999999753 36777765442 233444333333 34444332222223222 23
Q ss_pred HHHHHHHHHHHHHHHHHHhCC
Q 009167 408 LRVQQQNSTALRMAKILEAHP 428 (541)
Q Consensus 408 ~r~~~~~~~a~~la~~L~~~p 428 (541)
.++++..++++++.+.|++.+
T Consensus 423 ~~~~~l~~~a~~~r~~L~~i~ 443 (715)
T 3n75_A 423 RLINGSIERAIKFRKEIKRLR 443 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 456677778888888776543
No 228
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.72 E-value=2.2e-16 Score=170.26 Aligned_cols=276 Identities=14% Similarity=0.144 Sum_probs=162.7
Q ss_pred hHHHHHHHHHHHh--CCCcEEEeCCHHHHHHHHHHHhc-------c------------------CC---CEEEEcCCCCc
Q 009167 211 TTVVVEEKMSALE--GAESTVIMASGMSASTVMLLALV-------P------------------AG---GHIVTTTDCYR 260 (541)
Q Consensus 211 ~~~~Le~~LA~l~--g~e~~i~~sSGs~Ai~~al~all-------~------------------pG---d~Vlv~~~~y~ 260 (541)
..+.++++|+++. +.+.+++++||++|+..+++.+. + || ++||+.++.|+
T Consensus 111 l~~~la~~l~~~~~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yH 190 (472)
T 1ohv_A 111 FVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFH 190 (472)
T ss_dssp HHHHHHHTGGGGCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCC
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcc
Confidence 3444444455555 44678999999999999998663 1 46 89999999998
Q ss_pred chHHHHHhhcc-----cCCeE-----EEEeC----C-------------CCHHHHHHhccCC-----CceEEEEeCCCCC
Q 009167 261 KTRIFIETVLP-----KMGIT-----ATVID----P-------------ADMEGLEAALNNN-----NVSLFFTESPTNP 308 (541)
Q Consensus 261 ~~~~~~~~~l~-----~~Gi~-----v~~vd----~-------------~d~e~Le~al~~~-----~tklV~lesP~NP 308 (541)
+.......... ..+.. ...++ . .|+++|++++++. ++++|++|+.+|+
T Consensus 191 g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~ 270 (472)
T 1ohv_A 191 GRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSE 270 (472)
T ss_dssp CSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCT
T ss_pred cccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCC
Confidence 84322211111 11111 11111 0 1578888888651 4899999998999
Q ss_pred CCcccc----HHHHHHHHHhCCCEEEEeCCCCC-CCc---ccccccC----CcEEEECCccc-cCCCCCceEEEEEeChH
Q 009167 309 FLRCVD----VKLVSDLCHKKGAIVCIDGTFAT-PLN---QKALSLG----ADLVLHSATKF-IGGHNDVLAGSISGSGK 375 (541)
Q Consensus 309 tG~i~d----l~~Ia~la~~~gi~lIvDea~a~-~~~---~~~~~~g----aDivv~S~sK~-lgg~gd~~gG~lv~~~~ 375 (541)
+|.+++ +++|.++|++||++||+||+|.. +.. .....+| +|++ |++|. ++ ||+++ +++
T Consensus 271 ~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~--t~sK~~l~------GG~~~-~~~ 341 (472)
T 1ohv_A 271 GGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVM--TFSKKMMT------GGFFH-KEE 341 (472)
T ss_dssp TTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEE--EECGGGSS------EEEEE-CGG
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEE--EEcccccc------CCccC-chh
Confidence 999888 99999999999999999999863 111 1111234 6776 57798 55 47776 655
Q ss_pred HHHHHHHHhhhcCC-CchHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCC-CCCCchhhhHhhhc
Q 009167 376 LVTQIRNLHHVLGG-ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAKILEAHPKVKRVHYPG-LKSHPEHHIATQQM 451 (541)
Q Consensus 376 li~~l~~~~~~~G~-~~s~~~a~l~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~v~~P~-l~s~p~~~l~~~~~ 451 (541)
+. .+... ...++ ..++..+..++..++.+.. ..++..+..+++.+.|++... .+|. + ...
T Consensus 342 ~~-~~~~~-~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~v----------~~~ 405 (472)
T 1ohv_A 342 FR-PNAPY-RIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQA----RYPQFI----------SRV 405 (472)
T ss_dssp GS-CSSSS-SSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH----HCTTTC----------EEE
T ss_pred hc-ccccc-cccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh----hCCCcE----------Eee
Confidence 42 11111 11222 2356665555555554322 234444555566666654210 1121 0 011
Q ss_pred cCcccEEEEEEcCCHHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEecCCCHHHHH
Q 009167 452 TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLK 531 (541)
Q Consensus 452 ~g~g~~vsf~l~~~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~e~~edli 531 (541)
++.|.+++|++++ ......+.+.|...++.+..+ ..+.|||+++...+++.+
T Consensus 406 ~~~g~~~~~~~~~-~~~~~~~~~~l~~~Gv~~~~~---------------------------g~~~iRi~~~~~~t~e~i 457 (472)
T 1ohv_A 406 RGRGTFCSFDTPD-ESIRNKLISIARNKGVMLGGC---------------------------GDKSIRFRPTLVFRDHHA 457 (472)
T ss_dssp EEETTEEEEECSS-HHHHHHHHHHHHHTTEECEEE---------------------------TTTEEEECCCTTCCHHHH
T ss_pred cCCceEEEEEeCC-hhHHHHHHHHHHHCCeEEecC---------------------------CCCEEEEECCCCCCHHHH
Confidence 3357899998864 234566777765455443321 146899998876655555
Q ss_pred HHHHHHHh
Q 009167 532 ADVLQALH 539 (541)
Q Consensus 532 ~dL~~AL~ 539 (541)
+.+.++|+
T Consensus 458 ~~~~~~l~ 465 (472)
T 1ohv_A 458 HLFLNIFS 465 (472)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55544443
No 229
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.66 E-value=1.8e-14 Score=153.03 Aligned_cols=221 Identities=16% Similarity=0.080 Sum_probs=135.0
Q ss_pred CCCccCCCCchhHHHHHHHHHHHh-CC----C--cEEEeCCHHHHHHHHHH----HhccCCCEEEEcCCCCcchHHHHHh
Q 009167 200 ASFEYGRYGNPTTVVVEEKMSALE-GA----E--STVIMASGMSASTVMLL----ALVPAGGHIVTTTDCYRKTRIFIET 268 (541)
Q Consensus 200 ~~~~Y~R~~~p~~~~Le~~LA~l~-g~----e--~~i~~sSGs~Ai~~al~----all~pGd~Vlv~~~~y~~~~~~~~~ 268 (541)
..+.|. +.....+|+++++++. |. + ..+.+.+|+.|+..++. .++.|||+|++++|+|+.....++
T Consensus 79 ~~~~Y~--p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~- 155 (420)
T 4h51_A 79 LDYEYL--PISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVK- 155 (420)
T ss_dssp CCCCCC--CTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHH-
T ss_pred CCCCCC--CcCChHHHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHH-
Confidence 345565 4456678999999875 32 1 23445677776655554 445799999999999988665443
Q ss_pred hcccCCeE-EEE---eCC----CCHHHHHHhcc--CCCceEEEEeCCCCCCCcccc---HHHHHHHHHhCCCEEEEeCCC
Q 009167 269 VLPKMGIT-ATV---IDP----ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 269 ~l~~~Gi~-v~~---vd~----~d~e~Le~al~--~~~tklV~lesP~NPtG~i~d---l~~Ia~la~~~gi~lIvDea~ 335 (541)
..|.+ +.. .+. .|.+.+.+.+. ..+++++++.+|+||||.+++ +++|+++|+++++++++|++|
T Consensus 156 ---~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y 232 (420)
T 4h51_A 156 ---AAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAY 232 (420)
T ss_dssp ---HTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred ---HcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhh
Confidence 33433 222 222 25666666553 224788999999999999997 568889999999999999998
Q ss_pred CCCCccc----c------cc-cCCcEEEECCccccCCCCCceEEEEEeChHHHH-------HHHHHhhhcCCCchHHHHH
Q 009167 336 ATPLNQK----A------LS-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-------QIRNLHHVLGGALNPNAAY 397 (541)
Q Consensus 336 a~~~~~~----~------~~-~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~-------~l~~~~~~~G~~~s~~~a~ 397 (541)
....... . .+ ...-+++.|+||.++-.|. +.|++++..+..+ .+....+......+...+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~ 311 (420)
T 4h51_A 233 QGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSE-RAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGAR 311 (420)
T ss_dssp TTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGG-CEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHH
T ss_pred hhhccCCcccchHHHHhHHhhCceEEEEeccccccccccC-ceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHH
Confidence 7643211 1 01 1234888999999987764 4677766433222 2222222223333333333
Q ss_pred HHHHhH----------HHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 398 LIIRGM----------KTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 398 l~l~~l----------~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
++...+ +.+....++..+.+..+.+.|++.
T Consensus 312 ~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~ 351 (420)
T 4h51_A 312 LAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRL 351 (420)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 332222 122333344556667777777764
No 230
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.59 E-value=1.4e-13 Score=147.54 Aligned_cols=292 Identities=15% Similarity=0.089 Sum_probs=174.6
Q ss_pred CCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHH-HHHhh---------cc
Q 009167 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRI-FIETV---------LP 271 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~---e~~i~~sSGs~Ai~~al~al--l~pGd~Vlv~~~~y~~~~~-~~~~~---------l~ 271 (541)
.+++...+|.++|+++... +.+++++||++|+..+++.. .....+|+.....|++... .+... ..
T Consensus 104 ~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~ 183 (456)
T 4atq_A 104 TPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFG 183 (456)
T ss_dssp SCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSC
T ss_pred cCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCC
Confidence 3456667889999999864 45788899999999999743 2345789999999988432 22110 01
Q ss_pred cCCeEEEEeCCC-----------CHHH-------HHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEE
Q 009167 272 KMGITATVIDPA-----------DMEG-------LEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIV 329 (541)
Q Consensus 272 ~~Gi~v~~vd~~-----------d~e~-------Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~l 329 (541)
.+...+..++.. +.+. +++.+..+++.+|++|......|.+.+ +++|.++|++||+++
T Consensus 184 p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gill 263 (456)
T 4atq_A 184 PFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVF 263 (456)
T ss_dssp SCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEE
T ss_pred CccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCce
Confidence 111233334321 2222 333333335899999999888888776 889999999999999
Q ss_pred EEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCchHHHHHHHHHhH
Q 009167 330 CIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM 403 (541)
Q Consensus 330 IvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~~~G~~~s~~~a~l~l~~l 403 (541)
|+||++... +.........|+++ +.|.++|.. ..|.+++++++.+.+..........-+|..+..++..|
T Consensus 264 I~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lggg~--P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L 339 (456)
T 4atq_A 264 IADEVQSGFCRTGEWFAVDHEGVVPDIIT--MAKGIAGGL--PLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAI 339 (456)
T ss_dssp EEECTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGGTTS--SCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHH
T ss_pred EecccccccCCccccccccccCCCCchhh--hhhcccCcC--CceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHH
Confidence 999996431 22333445579988 679987653 56778888888776643221111123577777766666
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC------CHHHHHH
Q 009167 404 KTLHLR--VQQQNSTALRMAKILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG------DLTATIK 471 (541)
Q Consensus 404 ~tl~~r--~~~~~~~a~~la~~L~~----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~------~~~~~~~ 471 (541)
+.+... .++..+.-+++.+.|++ ++.. .+|. -.+.+|.|.|+.|++.. ..+...+
T Consensus 340 ~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~---~~~~----------v~~VRG~Gl~~giel~~~~~~~~~~~~~~~ 406 (456)
T 4atq_A 340 DTMEQHDLNGRARHIEELALGKLRELAAELSAG---GGSV----------VGDIRGRGAMLAIELVQPGSKEPNAELTKA 406 (456)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC--------C----------EEEEEEETTEEEEEEBCTTSCCBCHHHHHH
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHHhcccc---cCCc----------eEEeeecceEEEEEEecCCCCCcCHHHHHH
Confidence 655321 22222223333333332 2110 0010 12236788999999853 2345566
Q ss_pred HHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhh
Q 009167 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALHA 540 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG----~e~~edli~dL~~AL~~ 540 (541)
+.+.+...|+-+... |...+.|||..- .++.++.++.|+++|++
T Consensus 407 v~~~~~~~Gvl~~~~-------------------------g~~~~~irl~PpL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 407 VAAACLKEGVIILTC-------------------------GTYGNVIRLLPPLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp HHHHHHHTTEECEEE-------------------------CTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEec-------------------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 777766555433221 112456777643 35566777777887764
No 231
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.58 E-value=1.1e-13 Score=148.12 Aligned_cols=234 Identities=15% Similarity=0.152 Sum_probs=157.3
Q ss_pred CchhHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhh--cccCCeEEEEeCC
Q 009167 208 GNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV--LPKMGITATVIDP 282 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~-e~~i~~sSGs~Ai~~al~all--~pGd~Vlv~~~~y~~~~~~~~~~--l~~~Gi~v~~vd~ 282 (541)
.++...+|.+.|+++++. +.+.+++||++|+..+++... ...++||....+|++........ ..........++.
T Consensus 125 ~~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~ 204 (454)
T 4ao9_A 125 HNLLEGRLARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY 204 (454)
T ss_dssp EESSHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT
T ss_pred CcHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC
Confidence 356677899999998865 678888999999999997542 24478999899998832110000 0112235566778
Q ss_pred CCHHHHHHhccCC--CceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCC----CCcccccccCCcEEE
Q 009167 283 ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----PLNQKALSLGADLVL 352 (541)
Q Consensus 283 ~d~e~Le~al~~~--~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~----~~~~~~~~~gaDivv 352 (541)
+|++.+++.++++ ++.+|++|...+..|.+.| +++|.++|++||++||+||++.. ...........|+++
T Consensus 205 nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~PDi~t 284 (454)
T 4ao9_A 205 NDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKLGIRSDLTT 284 (454)
T ss_dssp TCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHHTCCCSEEE
T ss_pred chHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhccCCCCcEEE
Confidence 8999999888632 4889999999888998887 89999999999999999999742 111223344568887
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCCc--hHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHh
Q 009167 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGAL--NPNAAYLIIRGMKTLH--LRVQQQNSTALRMAKILEA 426 (541)
Q Consensus 353 ~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~--~~~G~~~--s~~~a~l~l~~l~tl~--~r~~~~~~~a~~la~~L~~ 426 (541)
+.|.+||+. ..|++++++++++.+.... ..++++. +|..+..++..|+.+. ...++..+..++|.+.|++
T Consensus 285 --~gK~lggG~--Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 285 --LGKYIGGGM--SFGAFGGRADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNA 360 (454)
T ss_dssp --EEGGGGTTS--SCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred --eccccCCCC--cceeeeeHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHH
Confidence 889998653 5788889999887764321 1123332 4666666666665542 2234444555555555543
Q ss_pred ----CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEc
Q 009167 427 ----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 427 ----~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
++.+.. .+|.|.|+.+++.
T Consensus 361 l~~~~~~~~~------------------vrg~G~m~gi~f~ 383 (454)
T 4ao9_A 361 LCANEGVAMQ------------------FTGIGSLMNAHFV 383 (454)
T ss_dssp HHHHHTBSCE------------------EEEETTEEEEESC
T ss_pred HHhhCCCCEE------------------EeeeceEEEEEEe
Confidence 332222 2457889999874
No 232
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.53 E-value=1.1e-12 Score=139.49 Aligned_cols=211 Identities=11% Similarity=0.103 Sum_probs=137.3
Q ss_pred HHHHHHHHHHHhCCCc--E-EEeCCHHHHHHHHHHHhccC----CCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC--
Q 009167 212 TVVVEEKMSALEGAES--T-VIMASGMSASTVMLLALVPA----GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (541)
Q Consensus 212 ~~~Le~~LA~l~g~e~--~-i~~sSGs~Ai~~al~all~p----Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~-- 282 (541)
.+.+...+.+++|... . +++++++.++.+++.+.+++ |+.||+++.+|.+....+ ...|+..+++++
T Consensus 100 e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl----~l~Gl~p~~v~~~~ 175 (450)
T 3bc8_A 100 TNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSM----VTAGFEPVVIENVL 175 (450)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHH----HHTTCEEEEECCEE
T ss_pred HHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHH----HHcCCeeEEEEeee
Confidence 3455666677778642 3 66666664444444444443 899999999999876544 345777666654
Q ss_pred ------CCHHHHHHhccCCC--ceEEEEeCCC-CCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc------ccccc-
Q 009167 283 ------ADMEGLEAALNNNN--VSLFFTESPT-NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALSL- 346 (541)
Q Consensus 283 ------~d~e~Le~al~~~~--tklV~lesP~-NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~------~~~~~- 346 (541)
.|+++|+++|++++ .+++++.+|+ +.+|.+.|+++|+++|++||++++||++|+..... .....
T Consensus 176 ~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~ 255 (450)
T 3bc8_A 176 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVG 255 (450)
T ss_dssp ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHS
T ss_pred cCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhccc
Confidence 28999999996421 3455555665 44678899999999999999999999999875432 11233
Q ss_pred CCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCchHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHH
Q 009167 347 GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAKI 423 (541)
Q Consensus 347 gaDivv~S~sK~lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~~s~~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~ 423 (541)
++|+++.|+||++..+- .++++.. +++.++++.......+...+.+..|..+. +.+.+...+++..++++++.+.
T Consensus 256 ~AD~~v~S~HK~l~a~~--~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~ 333 (450)
T 3bc8_A 256 RIDAFVQSLDKNFMVPV--GGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQ 333 (450)
T ss_dssp CCCEEEEEHHHHHSCCS--SCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCccCCCchh--ccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999988664 3566654 55666655443211122222234444332 3344555566667788888888
Q ss_pred HHhCC
Q 009167 424 LEAHP 428 (541)
Q Consensus 424 L~~~p 428 (541)
|++.+
T Consensus 334 l~~~~ 338 (450)
T 3bc8_A 334 LKKLA 338 (450)
T ss_dssp HHHHH
T ss_pred HHhhH
Confidence 87654
No 233
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.52 E-value=4.5e-13 Score=140.94 Aligned_cols=254 Identities=16% Similarity=0.154 Sum_probs=153.2
Q ss_pred CCccCCC--CchhHHHH----HHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHH-h
Q 009167 201 SFEYGRY--GNPTTVVV----EEKMSALEGAES-----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE-T 268 (541)
Q Consensus 201 ~~~Y~R~--~~p~~~~L----e~~LA~l~g~e~-----~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~-~ 268 (541)
+|..-|| +....+++ .++..+++|++. .+=.-||+.|+..++.++++|||+|+..+..+++...--. .
T Consensus 85 GyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~ 164 (490)
T 3ou5_A 85 GYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMS 164 (490)
T ss_dssp C----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC-------------
T ss_pred CCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccC
Confidence 3443443 34444444 345567889865 3667799999999999999999999999998887432110 0
Q ss_pred hcccC---CeEEEEe----CC----CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCC-
Q 009167 269 VLPKM---GITATVI----DP----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA- 336 (541)
Q Consensus 269 ~l~~~---Gi~v~~v----d~----~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a- 336 (541)
-..+. |.-+..+ |. .|.+++++.....++|+|++-.-. .-..+|.+++.++|++.|++|++|-++-
T Consensus 165 ~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~Sa--Y~r~id~~~~reIAd~vGA~Lm~DmAHia 242 (490)
T 3ou5_A 165 DVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSA--YARLIDYARMREVCDEVKAHLLADMAHIS 242 (490)
T ss_dssp ---------------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCSS--CCSCCCHHHHHHHHHHHTCEEEEECGGGH
T ss_pred CCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCcc--CccccCHHHHHHHHhhcccEEEechhhhh
Confidence 00011 1111111 21 278888887766578999984333 4567899999999999999999999953
Q ss_pred ----CCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh---------------HHHHHHHHHh--hhcCCCchHHH
Q 009167 337 ----TPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG---------------KLVTQIRNLH--HVLGGALNPNA 395 (541)
Q Consensus 337 ----~~~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~---------------~li~~l~~~~--~~~G~~~s~~~ 395 (541)
.+...+|+++ +|+|+.|.||.|.|+. ||+++.++ ++.+++.... ...|+...-..
T Consensus 243 GLVA~g~~psP~~~-ADvVTtTTHKTLrGPr---GG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~I 318 (490)
T 3ou5_A 243 GLVAAKVIPSPFKH-ADIVTTTTHKTLRGAR---SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAI 318 (490)
T ss_dssp HHHHTTSSCCGGGT-CSEEEEESSSTTCSCS---CEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHH
T ss_pred hhhcccccCCcccc-ceEEeccccccccCCC---ceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHH
Confidence 4566788887 9999999999999885 89988765 4556665532 23333322222
Q ss_pred HHHHH---HhH-HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcC---CHHH
Q 009167 396 AYLII---RGM-KTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLTA 468 (541)
Q Consensus 396 a~l~l---~~l-~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~---~~~~ 468 (541)
+..+. ..+ .......++..+|++.|++.|.++. . ++..-+-. ..++.+++.. +...
T Consensus 319 AAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G-~-~vvsGgTd---------------nHlvLvDl~~~g~tG~~ 381 (490)
T 3ou5_A 319 AAVAVALKQACTPMFREYSLQVLKNARAMADALLERG-Y-SLVSGGTD---------------NHLVLVDLRPKGLDGAR 381 (490)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-C-EEGGGSCS---------------SSEEEEECGGGTCCHHH
T ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCC-C-eeecCCCC---------------ceEEEEeccccCCCHHH
Confidence 22211 112 2456677888899999999998864 2 22222222 2367777753 2355
Q ss_pred HHHHHHHcc
Q 009167 469 TIKFIDALK 477 (541)
Q Consensus 469 ~~~~l~~L~ 477 (541)
+++.++...
T Consensus 382 ae~~Le~ag 390 (490)
T 3ou5_A 382 AERVLELVS 390 (490)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 666666543
No 234
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.52 E-value=9.2e-13 Score=141.86 Aligned_cols=284 Identities=14% Similarity=0.130 Sum_probs=173.7
Q ss_pred CchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCCcchH-HHHHhh----ccc
Q 009167 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTR-IFIETV----LPK 272 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~--e~~i~~sSGs~Ai~~al~all-------~pG-d~Vlv~~~~y~~~~-~~~~~~----l~~ 272 (541)
.++...+|.++|+++.+. +.+.+++||++|+..+++... +++ .+||.....|++.. ..+... -..
T Consensus 109 ~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~ 188 (473)
T 4e3q_A 109 MSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSV 188 (473)
T ss_dssp EEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGG
T ss_pred cCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccc
Confidence 456677899999999864 578888999999999997532 233 57888888888832 221100 001
Q ss_pred CC---eEEEEeCCC------------------CHHHHHHhcc---CCCceEEEEeCCCCCCCcccc----HHHHHHHHHh
Q 009167 273 MG---ITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (541)
Q Consensus 273 ~G---i~v~~vd~~------------------d~e~Le~al~---~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~ 324 (541)
++ .....++.. ..+++++.+. .+++.+|++|......|.+.+ +++|.++|++
T Consensus 189 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~ 268 (473)
T 4e3q_A 189 FGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRK 268 (473)
T ss_dssp GTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHH
T ss_pred cCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcc
Confidence 11 112222211 1234444443 224889999999988888776 8899999999
Q ss_pred CCCEEEEeCCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-----hcCCC--c
Q 009167 325 KGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-----VLGGA--L 391 (541)
Q Consensus 325 ~gi~lIvDea~a~~------~~~~~~~~gaDivv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~-----~~G~~--~ 391 (541)
||++||.||++..+ +.........|+++ +.|.++++. ...|++++++++.+.+..... ..|.+ -
T Consensus 269 ~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t--~~K~l~gG~-~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~G 345 (473)
T 4e3q_A 269 YDIPVISDEVICGFGRTGNTWGCVTYDFTPDAII--SSKNLTAGF-FPMGAVILGPELSKRLETAIEAIEEFPHGFTASG 345 (473)
T ss_dssp TTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEE--ECGGGGTTS-SCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTT
T ss_pred cceEEeccCccccCCcccchhHHHhcCCCCChHH--hcccccCCC-CCcccccccHHHHHHhccccccccccccCCCCCC
Confidence 99999999996432 12233345579987 789998653 356888889999888764321 12333 2
Q ss_pred hHHHHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHh---CCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-
Q 009167 392 NPNAAYLIIRGMKTLHLR--VQQQNSTALRMAKILEA---HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD- 465 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r--~~~~~~~a~~la~~L~~---~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~- 465 (541)
+|..+..++..|+.+... .++..+...++.+.|++ +|.|.. .+|.|.|+.|++..+
T Consensus 346 npla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~------------------vRG~Gl~~gielv~~~ 407 (473)
T 4e3q_A 346 HPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGE------------------YRGIGFMWALEAVKDK 407 (473)
T ss_dssp CHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSTTEEE------------------EEEETTEEEEEECSBT
T ss_pred CcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcCCCeeE------------------EeecceEEEEEEecCc
Confidence 577777777777665421 23333344445444443 343333 356788999998421
Q ss_pred ---------HHHHHHHHHHccCcCeecccCCcccccccCccccccCCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHH
Q 009167 466 ---------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKA 532 (541)
Q Consensus 466 ---------~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlS----vG~e~~edli~ 532 (541)
.....++.+.+...|+-+... .+.|||+ +..++.+++++
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------------------------g~~i~l~PPL~it~~eid~~~~ 459 (473)
T 4e3q_A 408 ASKTPFDGNLSVSERIANTCTDLGLICRPL----------------------------GQSVVLCPPFILTEAQMDEMFD 459 (473)
T ss_dssp TTTBCCCGGGCHHHHHHHHHHHTTEECEEE----------------------------TTEEEECCCTTCCHHHHHHHHH
T ss_pred cccccccccHHHHHHHHHHHHHCCcEEEec----------------------------CCEEEEeCCCCCCHHHHHHHHH
Confidence 122445555554444332211 1345554 34456777888
Q ss_pred HHHHHHhh
Q 009167 533 DVLQALHA 540 (541)
Q Consensus 533 dL~~AL~~ 540 (541)
.|+++|++
T Consensus 460 ~l~~al~~ 467 (473)
T 4e3q_A 460 KLEKALDK 467 (473)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888865
No 235
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.49 E-value=4.3e-13 Score=141.66 Aligned_cols=196 Identities=11% Similarity=0.139 Sum_probs=130.7
Q ss_pred CCC---cEEEeCCHHHHHHHHHHHhccC----CCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC--------CCHHHH
Q 009167 224 GAE---STVIMASGMSASTVMLLALVPA----GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGL 288 (541)
Q Consensus 224 g~e---~~i~~sSGs~Ai~~al~all~p----Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--------~d~e~L 288 (541)
|.. ..+++++++.++.+++++.+++ ||.||+++.+|.+.+..+ ...|++.+++++ .|++++
T Consensus 130 G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAl----iL~Gl~Pv~V~p~~d~~~~~id~e~l 205 (501)
T 3hl2_A 130 GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSM----ITAGFEPVVIENVLEGDELRTDLKAV 205 (501)
T ss_dssp TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHH----HHTTCEEEEECEEEETTEEEECHHHH
T ss_pred CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHH----HHcCCeEEEEeeeecccccCCCHHHH
Confidence 653 3455555556676766666664 499999999999877544 334777777754 279999
Q ss_pred HHhccCC---CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCcc------cccccC-CcEEEECCccc
Q 009167 289 EAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALSLG-ADLVLHSATKF 358 (541)
Q Consensus 289 e~al~~~---~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~~~------~~~~~g-aDivv~S~sK~ 358 (541)
+++|+++ .+.+|+.++++|..+.+.|+++|+++||+||++++|||+|+..+.. ....+| +|+++.|.||.
T Consensus 206 e~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~ 285 (501)
T 3hl2_A 206 EAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKN 285 (501)
T ss_dssp HHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHH
T ss_pred HHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEeccccc
Confidence 9998642 2344444444554557789999999999999999999999876521 234567 99999999998
Q ss_pred cCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCC-chH-HHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009167 359 IGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA-LNP-NAAYLIIR--GMKTLHLRVQQQNSTALRMAKILEAH 427 (541)
Q Consensus 359 lgg~gd~~gG~lv~-~~~li~~l~~~~~~~G~~-~s~-~~a~l~l~--~l~tl~~r~~~~~~~a~~la~~L~~~ 427 (541)
+--+- .||++.. ++++++++.... .|.. .+| .+.|+.+. +.+-+...+++..++++++.+.|++.
T Consensus 286 llvpI--GG~ii~~~d~e~l~~~~~~y--PGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~l 355 (501)
T 3hl2_A 286 FMVPV--GGAIIAGFNDSFIQEISKMY--PGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKL 355 (501)
T ss_dssp HCCCS--SCEEEEESCHHHHHHHHHTS--CSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeec--CceEEEeCCHHHHHHHHHhC--CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76542 1344433 556777664322 1221 223 33444433 44455666777788888888888764
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.44 E-value=1.4e-12 Score=149.46 Aligned_cols=257 Identities=13% Similarity=0.111 Sum_probs=155.9
Q ss_pred CCCchhHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHhc-----cC------------CCEEEEcCCCCcc-hHH
Q 009167 206 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV-----PA------------GGHIVTTTDCYRK-TRI 264 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g---~e~~i~~sSGs~Ai~~al~all-----~p------------Gd~Vlv~~~~y~~-~~~ 264 (541)
.+.++...+|.++|+++.+ .+.+++++||++|+..+++... .. ..+||..+..|++ +..
T Consensus 420 ~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~g 499 (831)
T 4a0g_A 420 ENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLG 499 (831)
T ss_dssp TEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHH
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCcee
Confidence 3456778899999999987 3578899999999999887542 12 2368888888877 333
Q ss_pred HHHhhc----c---------cCCeE-------------EEEeC------------CCC------------------HHHH
Q 009167 265 FIETVL----P---------KMGIT-------------ATVID------------PAD------------------MEGL 288 (541)
Q Consensus 265 ~~~~~l----~---------~~Gi~-------------v~~vd------------~~d------------------~e~L 288 (541)
.+...- . ..+.- ....+ ..+ .++|
T Consensus 500 als~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 579 (831)
T 4a0g_A 500 AMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYL 579 (831)
T ss_dssp HHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHH
T ss_pred eeeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHH
Confidence 222100 0 01100 01111 012 2567
Q ss_pred HHhcc-------CCCceEEEEeCC-CCCCCcccc----HHHHHHHHHhCCCEEEEeCCCCCC------CcccccccCCcE
Q 009167 289 EAALN-------NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------LNQKALSLGADL 350 (541)
Q Consensus 289 e~al~-------~~~tklV~lesP-~NPtG~i~d----l~~Ia~la~~~gi~lIvDea~a~~------~~~~~~~~gaDi 350 (541)
++.++ .+++.+|++|.. .+..|.+.+ +++|.++|++||++||+||++... +.........|+
T Consensus 580 e~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi 659 (831)
T 4a0g_A 580 SKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDI 659 (831)
T ss_dssp HHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSE
T ss_pred HHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcE
Confidence 77775 235889999997 788888775 889999999999999999996531 111222334688
Q ss_pred EEECCccccCCCCCceEEEEEeChHHHHHHHHHhh----hcC--CCchHHHHHHHHHhHHHHHHH--HHHHHHH------
Q 009167 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH----VLG--GALNPNAAYLIIRGMKTLHLR--VQQQNST------ 416 (541)
Q Consensus 351 vv~S~sK~lgg~gd~~gG~lv~~~~li~~l~~~~~----~~G--~~~s~~~a~l~l~~l~tl~~r--~~~~~~~------ 416 (541)
++ ++|.++++ -+..|++++++++++.+..... .+| ...+|..+..++..|+.+... .++..++
T Consensus 660 it--lsK~L~gG-~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~ 736 (831)
T 4a0g_A 660 AC--FAKLLTGG-MVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRE 736 (831)
T ss_dssp EE--ECGGGGTT-SSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCC
T ss_pred EE--EecccccC-ccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 75 88999863 2356889999998887653211 122 234677777777666654310 0111000
Q ss_pred --HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhccCcccEEEEEEcCC-------HHHHHHHHHHccCcCeec
Q 009167 417 --ALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALKIPYIAP 483 (541)
Q Consensus 417 --a~~la~~L~~~p~v~~v~~P~l~s~p~~~l~~~~~~g~g~~vsf~l~~~-------~~~~~~~l~~L~~~~iav 483 (541)
.+.+.+.+.++|.|..+ +|.|.|+.+++..+ ...+.++.+.+...|+.+
T Consensus 737 ~l~~~l~~~l~~~~~v~~v------------------rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v 794 (831)
T 4a0g_A 737 LWDEELVQQISSHSAVQRV------------------VVIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFT 794 (831)
T ss_dssp CSCHHHHHHHHHSTTEEEE------------------EEETTEEEEEEC---------CHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHHhhCCCceeE------------------eecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEE
Confidence 11233445555555444 34688999999642 123556666665555433
No 237
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=47.75 E-value=1.3e+02 Score=27.55 Aligned_cols=122 Identities=9% Similarity=0.124 Sum_probs=68.4
Q ss_pred CchhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE---EEEeC
Q 009167 208 GNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT---ATVID 281 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e---~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~---v~~vd 281 (541)
..|....+-..++...+.. .++=+++|+......+...+.++.+|+..+..-.. ....+..++..|+. +.++.
T Consensus 37 i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 37 PDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEH-QRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp CCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHH-HHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHH-HHHHHHHHHHcCCCcCcEEEEE
Confidence 3577778888888888776 67777777754444444445667788877654332 33333444444543 55544
Q ss_pred CCCHHHHHHhccCCCceEEEEeCCCCCCCccc-cHHHHHHHHHhCCCEEEEeCCC
Q 009167 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCV-DVKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 282 ~~d~e~Le~al~~~~tklV~lesP~NPtG~i~-dl~~Ia~la~~~gi~lIvDea~ 335 (541)
. |..++...+.+....+|++.... .... -++++.++.+ .|.++++|++.
T Consensus 116 g-da~~~l~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~Lk-pGG~lv~dn~~ 165 (221)
T 3dr5_A 116 S-RPLDVMSRLANDSYQLVFGQVSP---MDLKALVDAAWPLLR-RGGALVLADAL 165 (221)
T ss_dssp S-CHHHHGGGSCTTCEEEEEECCCT---TTHHHHHHHHHHHEE-EEEEEEETTTT
T ss_pred c-CHHHHHHHhcCCCcCeEEEcCcH---HHHHHHHHHHHHHcC-CCcEEEEeCCC
Confidence 3 34333333322247899884322 1111 1344444443 36778888874
No 238
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=43.73 E-value=30 Score=30.68 Aligned_cols=67 Identities=10% Similarity=-0.006 Sum_probs=44.3
Q ss_pred CCcchHHHHHhhcccCCeEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC
Q 009167 258 CYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 326 (541)
Q Consensus 258 ~y~~~~~~~~~~l~~~Gi~v~~vd~-~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g 326 (541)
.|.--..++...++..|.++.+... ..++++.+++.+.++.+|.++.-. +.....++++.+.+++.+
T Consensus 30 ~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~--~~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 30 GHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILN--GAHLHLMKRLMAKLRELG 97 (161)
T ss_dssp SCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESS--SCHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeec--hhhHHHHHHHHHHHHhcC
Confidence 3433345555677888999987764 367888777765458888885544 334455777877777654
No 239
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=39.82 E-value=29 Score=32.28 Aligned_cols=36 Identities=8% Similarity=-0.077 Sum_probs=31.5
Q ss_pred CceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEE
Q 009167 296 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 296 ~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
++..|++|-..|+.|.....+++.++|++||+.++.
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 367888888878999999999999999999988763
No 240
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=39.61 E-value=1.4e+02 Score=25.97 Aligned_cols=39 Identities=8% Similarity=0.070 Sum_probs=24.7
Q ss_pred CCccccHHHHHHHHHhCCCEEE--EeCCCCCCCcccccccCCcEEEE
Q 009167 309 FLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLH 353 (541)
Q Consensus 309 tG~i~dl~~Ia~la~~~gi~lI--vDea~a~~~~~~~~~~gaDivv~ 353 (541)
.|...++-++++.++++|+.+| .|+. ..++..-+|+++.
T Consensus 106 sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s~la~~ad~~l~ 146 (183)
T 2xhz_A 106 SGESSEITALIPVLKRLHVPLICITGRP------ESSMARAADVHLC 146 (183)
T ss_dssp SSCCHHHHHHHHHHHTTTCCEEEEESCT------TSHHHHHSSEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCC------CChhHHhCCEEEE
Confidence 4777778888999999886443 4332 2344444676654
No 241
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=39.42 E-value=46 Score=32.38 Aligned_cols=70 Identities=20% Similarity=0.357 Sum_probs=42.6
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC------C---CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHH
Q 009167 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (541)
Q Consensus 248 pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~------~---d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~I 318 (541)
++..+++..+.|+ .+++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+
T Consensus 178 ~~~~~v~~H~af~-------Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 243 (286)
T 3gi1_A 178 RSKTFVTQHTAFS-------YLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIA 243 (286)
T ss_dssp SCCEEEEEESCCH-------HHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHH
T ss_pred CCCEEEEECCchH-------HHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 4677887666553 234566777654321 1 3555566666556999998654433 233
Q ss_pred HHHHHhCCCEEEE
Q 009167 319 SDLCHKKGAIVCI 331 (541)
Q Consensus 319 a~la~~~gi~lIv 331 (541)
..++++.|+.+++
T Consensus 244 ~~la~~~g~~v~~ 256 (286)
T 3gi1_A 244 HAIAKSTGAKVKT 256 (286)
T ss_dssp HHHHHTTTCEEEE
T ss_pred HHHHHHhCCeEEE
Confidence 4567888887764
No 242
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=38.95 E-value=1.5e+02 Score=29.15 Aligned_cols=103 Identities=16% Similarity=0.198 Sum_probs=55.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCC-EEEEcCCC---CcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEE
Q 009167 226 ESTVIMASGMSASTVMLLALVPAGG-HIVTTTDC---YRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (541)
Q Consensus 226 e~~i~~sSGs~Ai~~al~all~pGd-~Vlv~~~~---y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~ 301 (541)
..++++..|..+ ..++..+.+.|- +|.+.+-. ......+...+....+.++..++..+.+++.+.+.+ ..+|+
T Consensus 155 k~~lVlGaGG~g-~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~--aDiII 231 (315)
T 3tnl_A 155 KKMTICGAGGAA-TAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAE--SVIFT 231 (315)
T ss_dssp SEEEEECCSHHH-HHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHT--CSEEE
T ss_pred CEEEEECCChHH-HHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcC--CCEEE
Confidence 457777766422 233344555664 66655444 333333332333334666666777777888877764 57888
Q ss_pred EeCCCCCCCc----cc-cHHHHHHHHHhCCCEEEEeCCCCC
Q 009167 302 TESPTNPFLR----CV-DVKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 302 lesP~NPtG~----i~-dl~~Ia~la~~~gi~lIvDea~a~ 337 (541)
-++|....+. .+ +.+.+ + .-.+|+|-+|..
T Consensus 232 NaTp~Gm~~~~~~~p~~~~~~l----~--~~~~V~DlvY~P 266 (315)
T 3tnl_A 232 NATGVGMKPFEGETLLPSADML----R--PELIVSDVVYKP 266 (315)
T ss_dssp ECSSTTSTTSTTCCSCCCGGGC----C--TTCEEEESCCSS
T ss_pred ECccCCCCCCCCCCCCCcHHHc----C--CCCEEEEeccCC
Confidence 7777532221 12 22222 2 235788988864
No 243
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=36.88 E-value=1.6e+02 Score=25.82 Aligned_cols=41 Identities=20% Similarity=0.076 Sum_probs=26.3
Q ss_pred CCccccHHHHHHHHHhCCCEEE--EeCCCCCCCcccccccCCcEEEECC
Q 009167 309 FLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLHSA 355 (541)
Q Consensus 309 tG~i~dl~~Ia~la~~~gi~lI--vDea~a~~~~~~~~~~gaDivv~S~ 355 (541)
.|...++-++++.++++|+.+| .|.. ..++...+|+++...
T Consensus 97 sG~t~~~~~~~~~ak~~g~~vi~IT~~~------~s~l~~~ad~~l~~~ 139 (187)
T 3sho_A 97 WRYLRDTVAALAGAAERGVPTMALTDSS------VSPPARIADHVLVAA 139 (187)
T ss_dssp SSCCHHHHHHHHHHHHTTCCEEEEESCT------TSHHHHHCSEEEECC
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEeCCC------CCcchhhCcEEEEec
Confidence 4777778888999999887554 3322 234444477776543
No 244
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=35.84 E-value=1.6e+02 Score=23.08 Aligned_cols=90 Identities=16% Similarity=0.260 Sum_probs=53.7
Q ss_pred cEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCC
Q 009167 227 STVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (541)
Q Consensus 227 ~~i~~sSGs~Ai~~al~all~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP 305 (541)
.+++++.|.-+..+ +..+.+.| .+|++.+..-. -... +...++.....|..+.+.+++.+.. ..+|+.+.|
T Consensus 7 ~v~I~G~G~iG~~~-~~~l~~~g~~~v~~~~r~~~----~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vi~~~~ 78 (118)
T 3ic5_A 7 NICVVGAGKIGQMI-AALLKTSSNYSVTVADHDLA----ALAV-LNRMGVATKQVDAKDEAGLAKALGG--FDAVISAAP 78 (118)
T ss_dssp EEEEECCSHHHHHH-HHHHHHCSSEEEEEEESCHH----HHHH-HHTTTCEEEECCTTCHHHHHHHTTT--CSEEEECSC
T ss_pred eEEEECCCHHHHHH-HHHHHhCCCceEEEEeCCHH----HHHH-HHhCCCcEEEecCCCHHHHHHHHcC--CCEEEECCC
Confidence 35566666544332 33445567 55655443221 1211 2245777777788888999988863 677777554
Q ss_pred CCCCCccccHHHHHHHHHhCCCEEE
Q 009167 306 TNPFLRCVDVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 306 ~NPtG~i~dl~~Ia~la~~~gi~lI 330 (541)
.. ....+.+.|.+.|+..+
T Consensus 79 ~~------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 79 FF------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp GG------GHHHHHHHHHHTTCEEE
T ss_pred ch------hhHHHHHHHHHhCCCEE
Confidence 31 23577888888887755
No 245
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=35.60 E-value=76 Score=30.98 Aligned_cols=63 Identities=11% Similarity=0.106 Sum_probs=40.4
Q ss_pred ccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC-CEEEEeCCCC
Q 009167 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCIDGTFA 336 (541)
Q Consensus 271 ~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g-i~lIvDea~a 336 (541)
...++++...|..|.+.+.+++++.++..|+..... ..+.....|.+.|++.| +..++=..|+
T Consensus 58 ~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~---~n~~~~~~l~~aa~~~g~v~~~v~S~~g 121 (346)
T 3i6i_A 58 EDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGG---ESILDQIALVKAMKAVGTIKRFLPSEFG 121 (346)
T ss_dssp HHTTCEEEECCTTCHHHHHHHHHHTTCCEEEECCCG---GGGGGHHHHHHHHHHHCCCSEEECSCCS
T ss_pred HhCCcEEEEeecCCHHHHHHHHhhCCCCEEEECCch---hhHHHHHHHHHHHHHcCCceEEeecccC
Confidence 345888888899999999999973225666553332 12333468888898888 6444423343
No 246
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=35.43 E-value=2e+02 Score=27.50 Aligned_cols=67 Identities=9% Similarity=0.034 Sum_probs=43.4
Q ss_pred CCeEEEEeCCC--CHHHHHHhc----cCCCceEEEEe----CCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCC
Q 009167 273 MGITATVIDPA--DMEGLEAAL----NNNNVSLFFTE----SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 273 ~Gi~v~~vd~~--d~e~Le~al----~~~~tklV~le----sP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a~~~ 339 (541)
.|..+.+-... +++++..++ ..++..+++++ +..|..-...++..+..+.+..+++||+|..++.+.
T Consensus 129 ~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 129 VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 55555544432 566666555 22234677776 333445566788888888777799999999987654
No 247
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=34.72 E-value=1.2e+02 Score=28.79 Aligned_cols=54 Identities=13% Similarity=0.127 Sum_probs=36.3
Q ss_pred cCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCC-CCCCccccHHHHHHHHHhCC-C
Q 009167 272 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPT-NPFLRCVDVKLVSDLCHKKG-A 327 (541)
Q Consensus 272 ~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~-NPtG~i~dl~~Ia~la~~~g-i 327 (541)
..++++...|..|.+.+.++++. ...|+..... ++...+.....+.+.|++.| +
T Consensus 54 ~~~~~~~~~D~~d~~~l~~~~~~--~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v 109 (313)
T 1qyd_A 54 QLGAKLIEASLDDHQRLVDALKQ--VDVVISALAGGVLSHHILEQLKLVEAIKEAGNI 109 (313)
T ss_dssp TTTCEEECCCSSCHHHHHHHHTT--CSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCC
T ss_pred hCCeEEEeCCCCCHHHHHHHHhC--CCEEEECCccccchhhHHHHHHHHHHHHhcCCC
Confidence 45788777788899999999874 5566553332 11113344568888998887 5
No 248
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=34.54 E-value=74 Score=31.56 Aligned_cols=70 Identities=14% Similarity=0.101 Sum_probs=44.0
Q ss_pred hccCCCEEEEcCCCCcc------hHHHHHhhcccCCeEEEEeCCC-------------CHHHHHHhccCCCceEEEEeCC
Q 009167 245 LVPAGGHIVTTTDCYRK------TRIFIETVLPKMGITATVIDPA-------------DMEGLEAALNNNNVSLFFTESP 305 (541)
Q Consensus 245 ll~pGd~Vlv~~~~y~~------~~~~~~~~l~~~Gi~v~~vd~~-------------d~e~Le~al~~~~tklV~lesP 305 (541)
.+++||+|-+..|..+. ........++.+|.++++-+.. -.++|.+++.+..+++|+...-
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 37899999888877542 1222234567789998865421 1567777776656899987444
Q ss_pred CCCCCcccc
Q 009167 306 TNPFLRCVD 314 (541)
Q Consensus 306 ~NPtG~i~d 314 (541)
..-+-+++|
T Consensus 88 G~g~~rlL~ 96 (327)
T 4h1h_A 88 GFNSNQLLP 96 (327)
T ss_dssp CSCGGGGGG
T ss_pred chhHHHHhh
Confidence 433445544
No 249
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=34.30 E-value=59 Score=32.05 Aligned_cols=69 Identities=16% Similarity=0.259 Sum_probs=42.4
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC------C---CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHH
Q 009167 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (541)
Q Consensus 248 pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~------~---d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~I 318 (541)
++..+++..+.|+ .+++.+|++...+.. . ++.+|.+.++++++++||.|.-.+ -+.+
T Consensus 189 ~~~~~v~~H~af~-------Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~-------~~~~ 254 (312)
T 2o1e_A 189 EKKEFITQHTAFG-------YLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIAS-------SKVA 254 (312)
T ss_dssp SCCEEEESSCTTH-------HHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCC-------HHHH
T ss_pred CCCEEEEECCchH-------HHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC-------hHHH
Confidence 4677888666553 235567887665421 1 355566666666788998854443 2344
Q ss_pred HHHHHhCCCEEE
Q 009167 319 SDLCHKKGAIVC 330 (541)
Q Consensus 319 a~la~~~gi~lI 330 (541)
..++++.|+.++
T Consensus 255 ~~ia~e~g~~v~ 266 (312)
T 2o1e_A 255 DTLASEIGAKTE 266 (312)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHHhCCcEE
Confidence 556788888764
No 250
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=33.96 E-value=77 Score=28.97 Aligned_cols=74 Identities=12% Similarity=0.096 Sum_probs=48.9
Q ss_pred CcchHHHHHhhcccCCeEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC----CEEEEeC
Q 009167 259 YRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG----AIVCIDG 333 (541)
Q Consensus 259 y~~~~~~~~~~l~~~Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g----i~lIvDe 333 (541)
|.--..++...++..|.++.+...+ .++++.+++.+.++.+|.+..-. +.....++++.+.+++.+ +.+++=.
T Consensus 101 H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~--~~~~~~~~~~i~~l~~~~~~~~~~v~vGG 178 (210)
T 1y80_A 101 HDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALL--TTTMMNMKSTIDALIAAGLRDRVKVIVGG 178 (210)
T ss_dssp CCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCS--GGGTHHHHHHHHHHHHTTCGGGCEEEEES
T ss_pred cHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHhcCCCCCCeEEEEC
Confidence 4333455566788889999887654 57888777754457888885433 234456778887777754 6777644
Q ss_pred C
Q 009167 334 T 334 (541)
Q Consensus 334 a 334 (541)
.
T Consensus 179 ~ 179 (210)
T 1y80_A 179 A 179 (210)
T ss_dssp T
T ss_pred C
Confidence 3
No 251
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=33.28 E-value=87 Score=31.78 Aligned_cols=69 Identities=9% Similarity=0.020 Sum_probs=42.1
Q ss_pred ccCCCEEEEcCCCCcch------HHHHHhhcccCCeEEEEeCCC-------------CHHHHHHhccCCCceEEEEeCCC
Q 009167 246 VPAGGHIVTTTDCYRKT------RIFIETVLPKMGITATVIDPA-------------DMEGLEAALNNNNVSLFFTESPT 306 (541)
Q Consensus 246 l~pGd~Vlv~~~~y~~~------~~~~~~~l~~~Gi~v~~vd~~-------------d~e~Le~al~~~~tklV~lesP~ 306 (541)
+++||+|-+-.|..+.. .......++.+|.+++.-+.. -.++|.+++.+..+++|+...-.
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 67899888888876532 122223566788888765421 15667777765568988874443
Q ss_pred CCCCcccc
Q 009167 307 NPFLRCVD 314 (541)
Q Consensus 307 NPtG~i~d 314 (541)
.-+-+++|
T Consensus 120 yga~rlLp 127 (371)
T 3tla_A 120 DNSNSLLP 127 (371)
T ss_dssp SCGGGGGG
T ss_pred ccHHHHHh
Confidence 33344444
No 252
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=33.21 E-value=88 Score=30.17 Aligned_cols=89 Identities=11% Similarity=0.056 Sum_probs=46.8
Q ss_pred HHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEEE-eCC-CCHHHHHHhccCCCceEEEEeCCCCCCCccc----c
Q 009167 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCV----D 314 (541)
Q Consensus 242 l~all~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~-vd~-~d~e~Le~al~~~~tklV~lesP~NPtG~i~----d 314 (541)
+..+.+.| |-|++++..+.....+. ..++..|++..+ +.+ .+.+.++...+.. ...||+.+....||.-. +
T Consensus 116 ~~~~~~aGvdgvii~Dlp~ee~~~~~-~~~~~~gl~~i~liaP~t~~eri~~i~~~~-~gfvY~vS~~GvTG~~~~~~~~ 193 (267)
T 3vnd_A 116 YTKAQAAGVDSVLIADVPVEESAPFS-KAAKAHGIAPIFIAPPNADADTLKMVSEQG-EGYTYLLSRAGVTGTESKAGEP 193 (267)
T ss_dssp HHHHHHHTCCEEEETTSCGGGCHHHH-HHHHHTTCEEECEECTTCCHHHHHHHHHHC-CSCEEESCCCCCC--------C
T ss_pred HHHHHHcCCCEEEeCCCCHhhHHHHH-HHHHHcCCeEEEEECCCCCHHHHHHHHHhC-CCcEEEEecCCCCCCccCCcHH
Confidence 33333444 77788776665433333 456677877553 333 3456666655432 34677755555566543 2
Q ss_pred HHHHHHHHHhC-CCEEEEe
Q 009167 315 VKLVSDLCHKK-GAIVCID 332 (541)
Q Consensus 315 l~~Ia~la~~~-gi~lIvD 332 (541)
+.++.+.++++ +++++++
T Consensus 194 ~~~~v~~vr~~~~~pv~vG 212 (267)
T 3vnd_A 194 IENILTQLAEFNAPPPLLG 212 (267)
T ss_dssp HHHHHHHHHTTTCCCEEEC
T ss_pred HHHHHHHHHHhcCCCEEEE
Confidence 44555555554 5677764
No 253
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=33.07 E-value=2.5e+02 Score=25.02 Aligned_cols=122 Identities=11% Similarity=0.162 Sum_probs=60.3
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE--EEEeCCCCH-
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADM- 285 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~--v~~vd~~d~- 285 (541)
.+....+-..++.......++=+++|+......+...+.++.+|+..+..-.. ....+..++..|+. +.++.. |.
T Consensus 49 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-~~~a~~~~~~~~~~~~v~~~~~-d~~ 126 (225)
T 3tr6_A 49 APEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKS-TALAKEYWEKAGLSDKIGLRLS-PAK 126 (225)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHH-HHHHHHHHHHTTCTTTEEEEES-CHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHH-HHHHHHHHHHCCCCCceEEEeC-CHH
Confidence 45566666677777776777777777644433343334446677776654322 23333334434432 444332 33
Q ss_pred HHHHHhccC---CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCC
Q 009167 286 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 286 e~Le~al~~---~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~ 335 (541)
+.+.....+ ....+|++..+. .....-++.+.++.+. |..+++|++.
T Consensus 127 ~~~~~~~~~~~~~~fD~v~~~~~~--~~~~~~l~~~~~~L~p-gG~lv~~~~~ 176 (225)
T 3tr6_A 127 DTLAELIHAGQAWQYDLIYIDADK--ANTDLYYEESLKLLRE-GGLIAVDNVL 176 (225)
T ss_dssp HHHHHHHTTTCTTCEEEEEECSCG--GGHHHHHHHHHHHEEE-EEEEEEECSS
T ss_pred HHHHHhhhccCCCCccEEEECCCH--HHHHHHHHHHHHhcCC-CcEEEEeCCC
Confidence 333332211 247888874431 0011113344444443 5677777774
No 254
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=33.03 E-value=47 Score=29.13 Aligned_cols=55 Identities=13% Similarity=0.037 Sum_probs=38.9
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHH-HHHHhCCCE-EEEeCCCCCC
Q 009167 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVS-DLCHKKGAI-VCIDGTFATP 338 (541)
Q Consensus 284 d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia-~la~~~gi~-lIvDea~a~~ 338 (541)
+.+.|.+.+++.++..|+++.|-|..|..-+ .+.++ .++++.+++ +.+||.+.+.
T Consensus 43 ~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts~ 103 (150)
T 1vhx_A 43 GLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTTM 103 (150)
T ss_dssp CHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCHH
T ss_pred HHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCHH
Confidence 5788999998877999999999877776654 23344 344455764 5579987653
No 255
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=32.78 E-value=2.2e+02 Score=27.40 Aligned_cols=59 Identities=12% Similarity=0.074 Sum_probs=33.6
Q ss_pred HHHhccCCCEEEEcCCCCcchHHHHHhhccc------CCeEEEEeCCCCHHHHHHhccCCCceEEEE
Q 009167 242 LLALVPAGGHIVTTTDCYRKTRIFIETVLPK------MGITATVIDPADMEGLEAALNNNNVSLFFT 302 (541)
Q Consensus 242 l~all~pGd~Vlv~~~~y~~~~~~~~~~l~~------~Gi~v~~vd~~d~e~Le~al~~~~tklV~l 302 (541)
+..|++.|.+|++..-.-......+...... .++++...|..|.+.++++++. +.+|+-
T Consensus 42 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih 106 (351)
T 3ruf_A 42 LEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG--VDHVLH 106 (351)
T ss_dssp HHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT--CSEEEE
T ss_pred HHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC--CCEEEE
Confidence 3455667877766433221111112111111 4677777888899999999874 566654
No 256
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=32.36 E-value=25 Score=34.24 Aligned_cols=59 Identities=25% Similarity=0.289 Sum_probs=36.0
Q ss_pred hcccCCeEEEEeCC------C---CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEE
Q 009167 269 VLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 269 ~l~~~Gi~v~~vd~------~---d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
+++.+|++...+.. . ++.+|.+.++++++++||.|.-.||- -.+.|.++|++.|+.+++
T Consensus 176 ~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~----~~~~l~~~a~~~g~~v~~ 243 (282)
T 3mfq_A 176 FAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIFTESTTNPE----RMKKLQEAVKAKGGQVEV 243 (282)
T ss_dssp HHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEECBTTSCTH----HHHHHHHHHHTTSCCCEE
T ss_pred HHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChH----HHHHHHHHHHhcCCceEE
Confidence 34567777654321 1 34455555655568999986544321 256788889999876554
No 257
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=32.14 E-value=61 Score=28.01 Aligned_cols=86 Identities=14% Similarity=0.086 Sum_probs=49.1
Q ss_pred HHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCC---H----HHHHHhccCCCceEEEEeCCCCCC
Q 009167 237 ASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD---M----EGLEAALNNNNVSLFFTESPTNPF 309 (541)
Q Consensus 237 Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d---~----e~Le~al~~~~tklV~lesP~NPt 309 (541)
.+.-....+..-|=+|+.+. +|.. .++..|+++..+.... - ..+.+.++++++.+|+. +|..-.
T Consensus 38 ~l~~~a~~l~~lGf~i~AT~----GTa~----~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVIn-t~~~~~ 108 (143)
T 2yvq_A 38 RFLGVAEQLHNEGFKLFATE----ATSD----WLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVIN-LPNNNT 108 (143)
T ss_dssp HHHHHHHHHHTTTCEEEEEH----HHHH----HHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEE-CCCCCG
T ss_pred HHHHHHHHHHHCCCEEEECc----hHHH----HHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEE-CCCCCC
Confidence 33334444555566666542 3332 2334567766664211 1 34677777766888775 554212
Q ss_pred CccccHHHHHHHHHhCCCEEEE
Q 009167 310 LRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 310 G~i~dl~~Ia~la~~~gi~lIv 331 (541)
....|-..|.+.|-+++++++.
T Consensus 109 ~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 109 KFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp GGHHHHHHHHHHHHHTTCCEEC
T ss_pred cCCccHHHHHHHHHHhCCCeEc
Confidence 2234566899999999998874
No 258
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=32.02 E-value=86 Score=31.21 Aligned_cols=70 Identities=16% Similarity=0.100 Sum_probs=44.2
Q ss_pred hccCCCEEEEcCCCCcch---HHHH---HhhcccCCeEEEEeCCC----------C---HHHHHHhccCCCceEEEEeCC
Q 009167 245 LVPAGGHIVTTTDCYRKT---RIFI---ETVLPKMGITATVIDPA----------D---MEGLEAALNNNNVSLFFTESP 305 (541)
Q Consensus 245 ll~pGd~Vlv~~~~y~~~---~~~~---~~~l~~~Gi~v~~vd~~----------d---~e~Le~al~~~~tklV~lesP 305 (541)
.+++||+|-+-.|..+.. ...+ ...++.+|.+++.-+.. | .++|.+++.+..+++|+...-
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 378999998888876543 2222 23567789998865421 1 566777776556899887444
Q ss_pred CCCCCcccc
Q 009167 306 TNPFLRCVD 314 (541)
Q Consensus 306 ~NPtG~i~d 314 (541)
..-+-+++|
T Consensus 88 G~g~~rlL~ 96 (331)
T 4e5s_A 88 GYNSNGLLK 96 (331)
T ss_dssp CSCGGGGGG
T ss_pred cccHHHHHh
Confidence 433444444
No 259
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=31.56 E-value=2.9e+02 Score=25.40 Aligned_cols=121 Identities=13% Similarity=0.113 Sum_probs=61.2
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE--EEEeCCCCHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADME 286 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~--v~~vd~~d~e 286 (541)
.+....+-..++.+.+...++=+++|+......+...+.++.+|+..+..-. .....+..++..|+. +.++. .|..
T Consensus 48 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~-~~~~a~~~~~~~g~~~~v~~~~-~d~~ 125 (248)
T 3tfw_A 48 AANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAH-HAQVARENLQLAGVDQRVTLRE-GPAL 125 (248)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHH-HHHHHHHHHHHTTCTTTEEEEE-SCHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEE-cCHH
Confidence 4666667777777777777777777764444444444444667776664332 223333334433432 44333 2444
Q ss_pred HHHHhccC-CCceEEEEeCCCCCCCcc-ccHHHHHHHHHhCCCEEEEeCCC
Q 009167 287 GLEAALNN-NNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 287 ~Le~al~~-~~tklV~lesP~NPtG~i-~dl~~Ia~la~~~gi~lIvDea~ 335 (541)
+....+.. ....+|++..+ .... .-++.+.++.+. |..+++|++.
T Consensus 126 ~~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~Lkp-GG~lv~~~~~ 172 (248)
T 3tfw_A 126 QSLESLGECPAFDLIFIDAD---KPNNPHYLRWALRYSRP-GTLIIGDNVV 172 (248)
T ss_dssp HHHHTCCSCCCCSEEEECSC---GGGHHHHHHHHHHTCCT-TCEEEEECCS
T ss_pred HHHHhcCCCCCeEEEEECCc---hHHHHHHHHHHHHhcCC-CeEEEEeCCC
Confidence 33222222 13678887432 1111 113344444443 5677778774
No 260
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=30.79 E-value=2.7e+02 Score=26.75 Aligned_cols=108 Identities=14% Similarity=0.104 Sum_probs=56.2
Q ss_pred HHHHHHHhCCCcEEEe-CCHHHHHHHHHHHhccCC--CEEEE--cCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHH
Q 009167 216 EEKMSALEGAESTVIM-ASGMSASTVMLLALVPAG--GHIVT--TTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEA 290 (541)
Q Consensus 216 e~~LA~l~g~e~~i~~-sSGs~Ai~~al~all~pG--d~Vlv--~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~ 290 (541)
-+.-+++....+.|++ +++..+.. ++..+.+.| -+|++ ++|.+.+ ....+ .|...|+++..+...-. -.
T Consensus 100 a~~a~~~I~~g~~IlT~~~s~Tv~~-~l~~a~~~~~~~~V~v~etrP~~qG-~~~a~-~L~~~gI~vtli~dsa~---~~ 173 (276)
T 1vb5_A 100 ASIGAQLIDDGDVIITHSFSSTVLE-IIRTAKERKKRFKVILTESSPDYEG-LHLAR-ELEFSGIEFEVITDAQM---GL 173 (276)
T ss_dssp HHHHHHHCCTTEEEECCSCCHHHHH-HHHHHHHTTCCEEEEEECCTTTTHH-HHHHH-HHHHTTCCEEEECGGGH---HH
T ss_pred HHHHHHHccCCCEEEEeCCChHHHH-HHHHHHHcCCeEEEEEeCCCcchhh-HHHHH-HHHHCCCCEEEEcHHHH---HH
Confidence 3334444444456663 33333333 344443333 36777 3466655 33333 34447999988763222 22
Q ss_pred hccCCCceEEEEeCCC-CCCCcccc---HHHHHHHHHhCCCEEEE
Q 009167 291 ALNNNNVSLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 291 al~~~~tklV~lesP~-NPtG~i~d---l~~Ia~la~~~gi~lIv 331 (541)
.+. ++..|++-.=. ...|.+.. -..++.+|+++++++++
T Consensus 174 ~m~--~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V 216 (276)
T 1vb5_A 174 FCR--EASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYV 216 (276)
T ss_dssp HHT--TCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred HHc--cCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEE
Confidence 333 36677762211 23343332 34788889999988777
No 261
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=30.62 E-value=78 Score=27.82 Aligned_cols=88 Identities=13% Similarity=0.057 Sum_probs=48.1
Q ss_pred CcEEEeCCHHHHHHHHHHHhccC-CCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHh--ccCCCceEEEE
Q 009167 226 ESTVIMASGMSASTVMLLALVPA-GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAA--LNNNNVSLFFT 302 (541)
Q Consensus 226 e~~i~~sSGs~Ai~~al~all~p-Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~a--l~~~~tklV~l 302 (541)
...++++.|.-+..++- .+.+. |-.|++-+..- .... .+...|+.+...|..+.+.++++ +. +..+|++
T Consensus 40 ~~v~IiG~G~~G~~~a~-~L~~~~g~~V~vid~~~----~~~~-~~~~~g~~~~~gd~~~~~~l~~~~~~~--~ad~vi~ 111 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYD-ELRARYGKISLGIEIRE----EAAQ-QHRSEGRNVISGDATDPDFWERILDTG--HVKLVLL 111 (183)
T ss_dssp CSEEEECCSHHHHHHHH-HHHHHHCSCEEEEESCH----HHHH-HHHHTTCCEEECCTTCHHHHHTBCSCC--CCCEEEE
T ss_pred CcEEEECCCHHHHHHHH-HHHhccCCeEEEEECCH----HHHH-HHHHCCCCEEEcCCCCHHHHHhccCCC--CCCEEEE
Confidence 46788888875544432 33344 54554443322 1121 23345777766677788877766 44 3678888
Q ss_pred eCCCCCCCccccHHHHHHHHHhCC
Q 009167 303 ESPTNPFLRCVDVKLVSDLCHKKG 326 (541)
Q Consensus 303 esP~NPtG~i~dl~~Ia~la~~~g 326 (541)
..++. .....+...+++.+
T Consensus 112 ~~~~~-----~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 112 AMPHH-----QGNQTALEQLQRRN 130 (183)
T ss_dssp CCSSH-----HHHHHHHHHHHHTT
T ss_pred eCCCh-----HHHHHHHHHHHHHC
Confidence 66541 12234555666644
No 262
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=30.46 E-value=82 Score=30.21 Aligned_cols=55 Identities=11% Similarity=0.090 Sum_probs=36.9
Q ss_pred cCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC-CEEEE
Q 009167 272 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCI 331 (541)
Q Consensus 272 ~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g-i~lIv 331 (541)
..|+++...|..|.+.+.++++. +..|+..... . .+.-...+.+.|++.| +.-++
T Consensus 57 ~~~v~~v~~Dl~d~~~l~~a~~~--~d~vi~~a~~--~-~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 57 SLGAIIVKGELDEHEKLVELMKK--VDVVISALAF--P-QILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp HTTCEEEECCTTCHHHHHHHHTT--CSEEEECCCG--G-GSTTHHHHHHHHHHHCCCCEEE
T ss_pred cCCCEEEEecCCCHHHHHHHHcC--CCEEEECCch--h-hhHHHHHHHHHHHhcCCCCEEE
Confidence 35788888898899999999974 5666653322 1 1334567888888877 54333
No 263
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=29.93 E-value=1e+02 Score=30.71 Aligned_cols=70 Identities=16% Similarity=-0.010 Sum_probs=43.2
Q ss_pred hccCCCEEEEcCCCCcch------HHHHHhhcccCCeEEEEeCCC----------C---HHHHHHhccCCCceEEEEeCC
Q 009167 245 LVPAGGHIVTTTDCYRKT------RIFIETVLPKMGITATVIDPA----------D---MEGLEAALNNNNVSLFFTESP 305 (541)
Q Consensus 245 ll~pGd~Vlv~~~~y~~~------~~~~~~~l~~~Gi~v~~vd~~----------d---~e~Le~al~~~~tklV~lesP 305 (541)
.+++||+|-+-.|..+.. .......++.+|.+++.-+.. | .++|.+++.+..+++|+...-
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 378899998888887542 222223567789988865421 1 566777776546888887444
Q ss_pred CCCCCcccc
Q 009167 306 TNPFLRCVD 314 (541)
Q Consensus 306 ~NPtG~i~d 314 (541)
..-+-+++|
T Consensus 89 G~g~~rlL~ 97 (336)
T 3sr3_A 89 GMNSNSLLP 97 (336)
T ss_dssp CSCGGGGGG
T ss_pred cccHHHHhh
Confidence 333344444
No 264
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=29.51 E-value=92 Score=30.24 Aligned_cols=70 Identities=13% Similarity=0.190 Sum_probs=41.2
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC----C---CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHH
Q 009167 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (541)
Q Consensus 248 pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----~---d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~ 320 (541)
++..+++..+.|+- +++.+|++...+.. . ++.+|.+.+++.++++||.|.-.++- -+..
T Consensus 189 ~~~~~v~~H~af~Y-------f~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~-------~~~~ 254 (291)
T 1pq4_A 189 PQRKFIVFHPSWAY-------FARDYNLVQIPIEVEGQEPSAQELKQLIDTAKENNLTMVFGETQFSTK-------SSEA 254 (291)
T ss_dssp SCCEEEESSCCCHH-------HHHHTTCEEEESCBTTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCCH-------HHHH
T ss_pred CCCEEEEECCchHH-------HHHHCCCEEeecccCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChH-------HHHH
Confidence 46788887776642 34556777655431 1 34555556666568888886555432 2233
Q ss_pred HHHhCCCEEEE
Q 009167 321 LCHKKGAIVCI 331 (541)
Q Consensus 321 la~~~gi~lIv 331 (541)
++++.|+.++.
T Consensus 255 ia~~~g~~v~~ 265 (291)
T 1pq4_A 255 IAAEIGAGVEL 265 (291)
T ss_dssp HHHHHTCEEEE
T ss_pred HHHHcCCeEEE
Confidence 56777776643
No 265
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=29.06 E-value=3.3e+02 Score=24.71 Aligned_cols=124 Identities=15% Similarity=0.185 Sum_probs=59.7
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe--EEEEeCCCCH
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADM 285 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi--~v~~vd~~d~ 285 (541)
..|....+-..++...+...++=+++|+......+...+.++.+|+..+..-.. ....+..++..|+ .+.++..+-.
T Consensus 56 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~-~~~a~~~~~~~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 56 ISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNA-TAIAKKYWQKAGVAEKISLRLGPAL 134 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHH-HHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHH-HHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 466666676777777777777777777643333333334445677766544322 2222233333332 2443333222
Q ss_pred HHHHHhccC---CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCC
Q 009167 286 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 286 e~Le~al~~---~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~ 335 (541)
+.+.....+ ....+|++..+. .....-++.+.++.+ .|..+++|++.
T Consensus 135 ~~l~~l~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lk-pgG~lv~~~~~ 184 (232)
T 3cbg_A 135 ATLEQLTQGKPLPEFDLIFIDADK--RNYPRYYEIGLNLLR-RGGLMVIDNVL 184 (232)
T ss_dssp HHHHHHHTSSSCCCEEEEEECSCG--GGHHHHHHHHHHTEE-EEEEEEEECTT
T ss_pred HHHHHHHhcCCCCCcCEEEECCCH--HHHHHHHHHHHHHcC-CCeEEEEeCCC
Confidence 333333221 246888874431 000001333333333 36677777764
No 266
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=29.02 E-value=2.5e+02 Score=26.87 Aligned_cols=64 Identities=11% Similarity=0.135 Sum_probs=43.1
Q ss_pred cccC-CeEEEEeCCC-CHHHHHHhccCCCceEEEEeCCCCCCC--ccccHHHHHHHHHhCC----CEEEEeCC
Q 009167 270 LPKM-GITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFL--RCVDVKLVSDLCHKKG----AIVCIDGT 334 (541)
Q Consensus 270 l~~~-Gi~v~~vd~~-d~e~Le~al~~~~tklV~lesP~NPtG--~i~dl~~Ia~la~~~g----i~lIvDea 334 (541)
++.. |.++.+.-.+ .++++.+++.+.++.+|.+..... ++ .+..+.++.+.+++.| +.+++=..
T Consensus 152 L~~~~G~eVi~LG~~vp~e~iv~aa~e~~~d~VglS~l~t-~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~ 223 (262)
T 1xrs_B 152 LERYEMIDAYNLGSQVANEDFIKKAVELEADVLLVSQTVT-QKNVHIQNMTHLIELLEAEGLRDRFVLLCGGP 223 (262)
T ss_dssp GGGCTTEEEEECCSSBCHHHHHHHHHHTTCSEEEEECCCC-TTSHHHHHHHHHHHHHHHTTCGGGSEEEEECT
T ss_pred HHhcCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEEeecC-CccchHHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 7888 9999876543 677777766544688888844442 22 3445777888887765 77777544
No 267
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=28.76 E-value=1.6e+02 Score=26.46 Aligned_cols=123 Identities=12% Similarity=0.085 Sum_probs=59.2
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe--EEEEeCCCCHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi--~v~~vd~~d~e 286 (541)
++....+-..++.+.+...++=+++|+......+...+.++.+|+..+..-.. ....+..++..|+ .+.++..+-.+
T Consensus 54 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-~~~a~~~~~~~g~~~~i~~~~~d~~~ 132 (229)
T 2avd_A 54 TCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQP-PELGRPLWRQAEAEHKIDLRLKPALE 132 (229)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHH-HHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHH-HHHHHHHHHHCCCCCeEEEEEcCHHH
Confidence 45555565666666666677777777643333333334446677776654332 2233333333333 24443332223
Q ss_pred HHHHhccC---CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCC
Q 009167 287 GLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 287 ~Le~al~~---~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~ 335 (541)
.+.....+ .+..+|++..+. .....-++.+.++.+. |..+++|++.
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~~--~~~~~~l~~~~~~L~p-gG~lv~~~~~ 181 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDADK--ENCSAYYERCLQLLRP-GGILAVLRVL 181 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSCS--TTHHHHHHHHHHHEEE-EEEEEEECCS
T ss_pred HHHHHHhcCCCCCccEEEECCCH--HHHHHHHHHHHHHcCC-CeEEEEECCC
Confidence 33332221 246788884431 1111114444454443 5566777764
No 268
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=28.61 E-value=68 Score=25.96 Aligned_cols=53 Identities=19% Similarity=0.220 Sum_probs=35.3
Q ss_pred CHHHHHHhccCCCceEEEEeCCCCCCCcccc----HHHHHHHHHhCCCEE-EEeCCCC
Q 009167 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIV-CIDGTFA 336 (541)
Q Consensus 284 d~e~Le~al~~~~tklV~lesP~NPtG~i~d----l~~Ia~la~~~gi~l-IvDea~a 336 (541)
+.+.|++.+++.++..|++--|-|..|..-+ .++.++..++.++++ .+||-+.
T Consensus 39 ~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 39 DVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 4677777777656889999999888887765 334444333337654 4788654
No 269
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=28.24 E-value=3.1e+02 Score=27.05 Aligned_cols=100 Identities=11% Similarity=0.054 Sum_probs=53.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCC--EEEEcC--CCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEE
Q 009167 226 ESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (541)
Q Consensus 226 e~~i~~sSGs~Ai~~al~all~pGd--~Vlv~~--~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~ 301 (541)
.+.|++-+.+..+...+....+.|. +|++.. |.+.|. .+. ..|...|++++++...-. ...+. ++..|+
T Consensus 122 g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~-~la-~~L~~~gI~vtli~Dsa~---~~~m~--~vd~Vi 194 (315)
T 3ecs_A 122 GATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGK-KMA-KALCHLNVPVTVVLDAAV---GYIME--KADLVI 194 (315)
T ss_dssp TEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHH-HHH-HHHHTTTCCEEEECGGGH---HHHGG--GCSEEE
T ss_pred CCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHH-HHH-HHHHHcCCCEEEEehhHH---HHHHH--hCCEEE
Confidence 3456664444344444444444453 455543 445553 333 446678999988753322 33333 255666
Q ss_pred EeCCC-CCCCcccc---HHHHHHHHHhCCCEEEEe
Q 009167 302 TESPT-NPFLRCVD---VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 302 lesP~-NPtG~i~d---l~~Ia~la~~~gi~lIvD 332 (541)
+-.=. -..|.+.. --.++-+|+.+|++++|=
T Consensus 195 vGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 195 VGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp EECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred ECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 52211 22344443 236778899999988873
No 270
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=27.70 E-value=1.2e+02 Score=28.74 Aligned_cols=81 Identities=15% Similarity=0.184 Sum_probs=45.0
Q ss_pred hcccCCeEEEE--eCCCCHHHHHHhccCCCceEEEEeCCCCCC--Ccc-cc--HH---HHHHHHHh--CCCEEEEeCCCC
Q 009167 269 VLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRC-VD--VK---LVSDLCHK--KGAIVCIDGTFA 336 (541)
Q Consensus 269 ~l~~~Gi~v~~--vd~~d~e~Le~al~~~~tklV~lesP~NPt--G~i-~d--l~---~Ia~la~~--~gi~lIvDea~a 336 (541)
..+..|.++-. -+...++.++..+.. +.+|++.+.+ |. |.- .| ++ ++.+++.+ +++.+.+|.--.
T Consensus 129 ~ir~~G~k~Gvalnp~Tp~e~l~~~l~~--vD~VlvMsV~-PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~ 205 (246)
T 3inp_A 129 LIKSFGIQAGLALNPATGIDCLKYVESN--IDRVLIMSVN-PGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN 205 (246)
T ss_dssp HHHTTTSEEEEEECTTCCSGGGTTTGGG--CSEEEEECSC-TTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC
T ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHhc--CCEEEEeeec-CCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC
Confidence 34556665432 234466777766653 6777776654 42 321 12 44 44555544 358899997644
Q ss_pred CCCcccccccCCcEEE
Q 009167 337 TPLNQKALSLGADLVL 352 (541)
Q Consensus 337 ~~~~~~~~~~gaDivv 352 (541)
..-.....+.|+|+++
T Consensus 206 ~~ti~~~~~aGAD~~V 221 (246)
T 3inp_A 206 PYNIAEIAVCGVNAFV 221 (246)
T ss_dssp TTTHHHHHTTTCCEEE
T ss_pred HHHHHHHHHcCCCEEE
Confidence 3222344567899876
No 271
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=27.67 E-value=30 Score=35.71 Aligned_cols=86 Identities=10% Similarity=0.153 Sum_probs=49.1
Q ss_pred cCCCEEEEcCCCCc--chHHHHHhhcccCCeEEEEeCCCC--HH---HHHHhccCCCceEEEEeCCCCCCCccccHHHHH
Q 009167 247 PAGGHIVTTTDCYR--KTRIFIETVLPKMGITATVIDPAD--ME---GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (541)
Q Consensus 247 ~pGd~Vlv~~~~y~--~~~~~~~~~l~~~Gi~v~~vd~~d--~e---~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia 319 (541)
.+|..|++.--++. ....-+...++.+|++.+.+.+.. +. .....-....+.= | .++...|...++++++
T Consensus 7 ~~g~~~i~~~f~W~w~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~d-y--~i~~~~Gt~~df~~lv 83 (496)
T 4gqr_A 7 QQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVS-Y--KLCTRSGNEDEFRNMV 83 (496)
T ss_dssp CTTCCEEEEETTCCHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSC-S--CSCBTTBCHHHHHHHH
T ss_pred CCCCcEEEEecCCCHHHHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccC-c--eeCCCCCCHHHHHHHH
Confidence 35666666554442 111112234777888877775431 00 0000000001111 1 3455678889999999
Q ss_pred HHHHhCCCEEEEeCCC
Q 009167 320 DLCHKKGAIVCIDGTF 335 (541)
Q Consensus 320 ~la~~~gi~lIvDea~ 335 (541)
+.||++|+.||+|-++
T Consensus 84 ~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 84 TRCNNVGVRIYVDAVI 99 (496)
T ss_dssp HHHHHTTCEEEEEECC
T ss_pred HHHHHCCCEEEEEEcc
Confidence 9999999999999884
No 272
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=27.42 E-value=2.3e+02 Score=24.68 Aligned_cols=39 Identities=13% Similarity=0.086 Sum_probs=24.5
Q ss_pred CCccccHHHHHHHHHhCCCEEE--EeCCCCCCCcccccccCCcEEEE
Q 009167 309 FLRCVDVKLVSDLCHKKGAIVC--IDGTFATPLNQKALSLGADLVLH 353 (541)
Q Consensus 309 tG~i~dl~~Ia~la~~~gi~lI--vDea~a~~~~~~~~~~gaDivv~ 353 (541)
.|...++-++++.|+++|+.+| .|. ...++...+|+++.
T Consensus 89 sG~t~~~~~~~~~ak~~g~~vi~IT~~------~~s~l~~~ad~~l~ 129 (186)
T 1m3s_A 89 SGETKSLIHTAAKAKSLHGIVAALTIN------PESSIGKQADLIIR 129 (186)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEESC------TTSHHHHHCSEEEE
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEECC------CCCchHHhCCEEEE
Confidence 3666677788899999997655 332 22344444676664
No 273
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=27.34 E-value=38 Score=29.30 Aligned_cols=44 Identities=11% Similarity=0.144 Sum_probs=31.5
Q ss_pred HHHHhccCCCceEEEEeCCC--CCCCccccHHHHHHHHHhCCCEEEE
Q 009167 287 GLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 287 ~Le~al~~~~tklV~lesP~--NPtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
++.+.|.++++.+|+. +|. ++-....|...|.+.|-.|+++++.
T Consensus 65 ~I~d~I~~geIdlVIn-t~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 65 QMGARVAEGRILAVIF-FRDPLTAQPHEPDVQALLRVCDVHGVPLAT 110 (134)
T ss_dssp HHHHHHHTTCEEEEEE-ECCTTTCCTTSCCSHHHHHHHHHHTCCEEC
T ss_pred hHHHHHHCCCccEEEE-ccCcccCCCccchHHHHHHHHHHcCCCeEc
Confidence 5677777666877765 443 4333356888999999999998874
No 274
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=27.30 E-value=3.3e+02 Score=24.17 Aligned_cols=124 Identities=15% Similarity=0.199 Sum_probs=61.3
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe--EEEEeCCCCHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi--~v~~vd~~d~e 286 (541)
.+....+-..++...+...++=+++|+......+...+.++.+|+..+..-.. ....+..+...|+ .+.++..+-.+
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~-~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKH-ADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHH-HHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHH-HHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 46666777777777777777777777644444444444446677776644322 2333333333343 24433332222
Q ss_pred HHHHhccC--CCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCC
Q 009167 287 GLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 287 ~Le~al~~--~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a 336 (541)
.+...... ....+|++..+. .....-++.+.++.+ .|.++++|++..
T Consensus 122 ~~~~~~~~~~~~fD~v~~d~~~--~~~~~~l~~~~~~L~-pgG~lv~~~~~~ 170 (223)
T 3duw_A 122 SLQQIENEKYEPFDFIFIDADK--QNNPAYFEWALKLSR-PGTVIIGDNVVR 170 (223)
T ss_dssp HHHHHHHTTCCCCSEEEECSCG--GGHHHHHHHHHHTCC-TTCEEEEESCSG
T ss_pred HHHHHHhcCCCCcCEEEEcCCc--HHHHHHHHHHHHhcC-CCcEEEEeCCCc
Confidence 23222211 136788874431 000111333444443 356888888753
No 275
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=26.97 E-value=1.5e+02 Score=28.15 Aligned_cols=86 Identities=13% Similarity=0.050 Sum_probs=46.4
Q ss_pred hccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEE-EeCC-CCHHHHHHhccCCCceEEEEeCCCCCCCcccc-----HH
Q 009167 245 LVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITAT-VIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-----VK 316 (541)
Q Consensus 245 ll~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~-~vd~-~d~e~Le~al~~~~tklV~lesP~NPtG~i~d-----l~ 316 (541)
+...| |-|++++..+.....+. ..++..|++.. .+.+ .+.+.++...... ...+++.+.+.-||...+ .+
T Consensus 118 ~~~aGadgii~~d~~~e~~~~~~-~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~-~g~v~~~s~~G~tG~~~~~~~~~~~ 195 (268)
T 1qop_A 118 CEQVGVDSVLVADVPVEESAPFR-QAALRHNIAPIFICPPNADDDLLRQVASYG-RGYTYLLSRSGVTGAENRGALPLHH 195 (268)
T ss_dssp HHHHTCCEEEETTCCGGGCHHHH-HHHHHTTCEEECEECTTCCHHHHHHHHHHC-CSCEEEESSSSCCCSSSCC--CCHH
T ss_pred HHHcCCCEEEEcCCCHHHHHHHH-HHHHHcCCcEEEEECCCCCHHHHHHHHhhC-CCcEEEEecCCcCCCccCCCchHHH
Confidence 33334 66888776654433333 45666777643 3333 3455555554432 235666666666776432 34
Q ss_pred HHHHHHHhCCCEEEEe
Q 009167 317 LVSDLCHKKGAIVCID 332 (541)
Q Consensus 317 ~Ia~la~~~gi~lIvD 332 (541)
.|.++.+..++++++|
T Consensus 196 ~i~~lr~~~~~pi~vg 211 (268)
T 1qop_A 196 LIEKLKEYHAAPALQG 211 (268)
T ss_dssp HHHHHHHTTCCCEEEE
T ss_pred HHHHHHhccCCcEEEE
Confidence 4444444446777776
No 276
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=26.93 E-value=1.9e+02 Score=26.86 Aligned_cols=123 Identities=14% Similarity=0.121 Sum_probs=58.2
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe--EEEEeCCCCHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi--~v~~vd~~d~e 286 (541)
.+....+-..++...+...++=+++|+......+...+.++.+|+..+..-... ...+..++..|+ .+.++.. |..
T Consensus 45 ~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~-~~a~~~~~~~g~~~~i~~~~g-da~ 122 (242)
T 3r3h_A 45 APEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWT-KHAHPYWREAKQEHKIKLRLG-PAL 122 (242)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSC-CCSHHHHHHTTCTTTEEEEES-CHH
T ss_pred CHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEc-CHH
Confidence 455666666777777777666555554333333333445566777665432221 111122222232 2333332 333
Q ss_pred H-HHHhcc---CCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCC
Q 009167 287 G-LEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 287 ~-Le~al~---~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a 336 (541)
+ +..... .....+|++..+. .....-++++.++.+. |.++++|++..
T Consensus 123 ~~l~~~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lkp-GG~lv~d~~~~ 173 (242)
T 3r3h_A 123 DTLHSLLNEGGEHQFDFIFIDADK--TNYLNYYELALKLVTP-KGLIAIDNIFW 173 (242)
T ss_dssp HHHHHHHHHHCSSCEEEEEEESCG--GGHHHHHHHHHHHEEE-EEEEEEECSSS
T ss_pred HHHHHHhhccCCCCEeEEEEcCCh--HHhHHHHHHHHHhcCC-CeEEEEECCcc
Confidence 3 333221 1247899886541 1111114444444443 66777788743
No 277
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=26.50 E-value=1.1e+02 Score=30.04 Aligned_cols=67 Identities=18% Similarity=0.279 Sum_probs=41.1
Q ss_pred CCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC------C---CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHH
Q 009167 249 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (541)
Q Consensus 249 Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~------~---d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia 319 (541)
+..+++..+.|+ .+++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+.
T Consensus 190 ~~~~v~~H~af~-------Yfa~~yGl~~~~~~~i~~~~ePs~~~l~~l~~~ik~~~v~~If~e~~~~~-------k~~~ 255 (307)
T 3ujp_A 190 QRFLVSCEGAFS-------YLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQK 255 (307)
T ss_dssp GCEEEEEESTTH-------HHHHHTTCEEEEEESSCCSSCCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHH
T ss_pred CCEEEEECchHH-------HHHHHCCCcEEEeeccCCCCCCCHHHHHHHHHHHHhcCCcEEEEeCCCCh-------HHHH
Confidence 456666555443 235567877654421 1 3556666666667999999765544 3455
Q ss_pred HHHHhCCCEE
Q 009167 320 DLCHKKGAIV 329 (541)
Q Consensus 320 ~la~~~gi~l 329 (541)
.++++.|+.+
T Consensus 256 ~ia~e~g~~v 265 (307)
T 3ujp_A 256 QVAQATGARF 265 (307)
T ss_dssp HTTTTTCCEE
T ss_pred HHHHHhCCce
Confidence 6678888775
No 278
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=26.25 E-value=3.1e+02 Score=28.43 Aligned_cols=125 Identities=18% Similarity=0.263 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHHhCC----------CcEEEeC----CHHH-HHHHHHHHhccCCCEE-EEcCCCCc-chHHHHHhhcccC
Q 009167 211 TTVVVEEKMSALEGA----------ESTVIMA----SGMS-ASTVMLLALVPAGGHI-VTTTDCYR-KTRIFIETVLPKM 273 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~----------e~~i~~s----SGs~-Ai~~al~all~pGd~V-lv~~~~y~-~~~~~~~~~l~~~ 273 (541)
....+.+.|.++++. ...|++. +|-. .+..+...+.+.|.+| ++..+.|. +....+..+....
T Consensus 75 v~~~l~~eL~~~L~~~~~~~~~~~~p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~aa~eqL~~~~~~~ 154 (443)
T 3dm5_A 75 IIKIVYEELTKFLGTEAKPIEIKEKPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRY 154 (443)
T ss_dssp HHHHHHHHHHHHTTSSCCCCCCCSSSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhcCcccccccCCCCeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHHHHhc
Confidence 345677777777763 1233332 2322 2222223344556544 44545554 3444454555667
Q ss_pred CeEEEEeC-CCCHHHH-----HHhccCCCceEEEEeCCCCCC---CccccHHHHHHHHHhCCCEEEEeCCCC
Q 009167 274 GITATVID-PADMEGL-----EAALNNNNVSLFFTESPTNPF---LRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 274 Gi~v~~vd-~~d~e~L-----e~al~~~~tklV~lesP~NPt---G~i~dl~~Ia~la~~~gi~lIvDea~a 336 (541)
|+++...+ ..|+.++ +.+-.. +..+|++++|.--. .....+..+.+..+...+++|+|.+.+
T Consensus 155 gvpv~~~~~~~dp~~i~~~al~~a~~~-~~DvVIIDTaGrl~~d~~lm~el~~i~~~~~pd~vlLVvDA~~g 225 (443)
T 3dm5_A 155 HIEVFGNPQEKDAIKLAKEGVDYFKSK-GVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIG 225 (443)
T ss_dssp TCEEECCTTCCCHHHHHHHHHHHHHHT-TCSEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGG
T ss_pred CCcEEecCCCCCHHHHHHHHHHHHHhC-CCCEEEEECCCcccchHHHHHHHHHHHHhhcCceEEEEEeCCCc
Confidence 77765433 2354332 233233 36899999885211 111123344444445679999998753
No 279
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=26.17 E-value=3.7e+02 Score=24.82 Aligned_cols=123 Identities=15% Similarity=0.141 Sum_probs=61.6
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe--EEEEeCCCCHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi--~v~~vd~~d~e 286 (541)
.+....+-..+....+...++=+++|+......+...+.++.+|+..+..-.. ....+..++..|+ .+.++..+-.+
T Consensus 64 ~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~-~~~a~~~~~~~g~~~~i~~~~gda~~ 142 (247)
T 1sui_A 64 SADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKEN-YELGLPVIKKAGVDHKIDFREGPALP 142 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHH-HHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHH-HHHHHHHHHHcCCCCCeEEEECCHHH
Confidence 45566666667777777777777777643333333344546677766654322 2333333444443 34444332223
Q ss_pred HHHHhcc----CCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCC
Q 009167 287 GLEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 287 ~Le~al~----~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~ 335 (541)
.+..... .....+|++.... .....-++.+.++.+. |.++++|++.
T Consensus 143 ~l~~l~~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~Lkp-GG~lv~d~~~ 192 (247)
T 1sui_A 143 VLDEMIKDEKNHGSYDFIFVDADK--DNYLNYHKRLIDLVKV-GGVIGYDNTL 192 (247)
T ss_dssp HHHHHHHSGGGTTCBSEEEECSCS--TTHHHHHHHHHHHBCT-TCCEEEECTT
T ss_pred HHHHHHhccCCCCCEEEEEEcCch--HHHHHHHHHHHHhCCC-CeEEEEecCC
Confidence 2333210 2236788885431 1111124455555544 5566778774
No 280
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=25.89 E-value=3.8e+02 Score=24.42 Aligned_cols=123 Identities=17% Similarity=0.154 Sum_probs=60.5
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCe--EEEEeCCCCHH
Q 009167 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPADME 286 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi--~v~~vd~~d~e 286 (541)
.+....+-..++...+...++=+++|+......+...+.++.+|+..+..- ......+..++..|+ .+.++..+-.+
T Consensus 55 ~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~-~~~~~a~~~~~~~g~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 55 SPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDR-EAYEIGLPFIRKAGVEHKINFIESDAML 133 (237)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCH-HHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 455566666777777777777777666333333333345566777766432 223333333444443 24444332223
Q ss_pred HHHHhcc----CCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCCC
Q 009167 287 GLEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 287 ~Le~al~----~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea~ 335 (541)
.+..... .....+|++.... .....-++.+.++.+ .|.++++|++.
T Consensus 134 ~l~~l~~~~~~~~~fD~I~~d~~~--~~~~~~l~~~~~~L~-pGG~lv~d~~~ 183 (237)
T 3c3y_A 134 ALDNLLQGQESEGSYDFGFVDADK--PNYIKYHERLMKLVK-VGGIVAYDNTL 183 (237)
T ss_dssp HHHHHHHSTTCTTCEEEEEECSCG--GGHHHHHHHHHHHEE-EEEEEEEECTT
T ss_pred HHHHHHhccCCCCCcCEEEECCch--HHHHHHHHHHHHhcC-CCeEEEEecCC
Confidence 3333221 2247888885321 111111334444443 36677788874
No 281
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=25.84 E-value=1.5e+02 Score=27.70 Aligned_cols=55 Identities=13% Similarity=0.138 Sum_probs=36.3
Q ss_pred ccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCC-CCC-CccccHHHHHHHHHhCCC
Q 009167 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT-NPF-LRCVDVKLVSDLCHKKGA 327 (541)
Q Consensus 271 ~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~-NPt-G~i~dl~~Ia~la~~~gi 327 (541)
...++++...|..|.+.++++++. +..|+..... ++. ..+.....+.+.|++.|+
T Consensus 42 ~~~~v~~~~~D~~d~~~l~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 42 WRGKVSVRQLDYFNQESMVEAFKG--MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp GBTTBEEEECCTTCHHHHHHHTTT--CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred hhCCCEEEEcCCCCHHHHHHHHhC--CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCC
Confidence 345788888899999999999874 5666653332 111 112235578888888875
No 282
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=25.05 E-value=1.7e+02 Score=27.17 Aligned_cols=53 Identities=25% Similarity=0.234 Sum_probs=31.7
Q ss_pred CCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCC
Q 009167 273 MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 327 (541)
Q Consensus 273 ~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi 327 (541)
.++++...|..|.+.++++++. ...|+.....++...+.-...+.+.|++.|+
T Consensus 44 ~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 44 QGITVRQADYGDEAALTSALQG--VEKLLLISSSEVGQRAPQHRNVINAAKAAGV 96 (286)
T ss_dssp TTCEEEECCTTCHHHHHHHTTT--CSEEEECC--------CHHHHHHHHHHHHTC
T ss_pred CCCeEEEcCCCCHHHHHHHHhC--CCEEEEeCCCCchHHHHHHHHHHHHHHHcCC
Confidence 3677777788899999999864 5566553332222222335577788877664
No 283
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=24.79 E-value=2e+02 Score=23.63 Aligned_cols=73 Identities=19% Similarity=0.241 Sum_probs=42.2
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCC
Q 009167 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (541)
Q Consensus 226 e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP 305 (541)
...++++.|.-+..++ ..+.+.|-+|++-+..-. .++. +...|..+...|..+.+.++++--. +..+|++..+
T Consensus 7 ~~v~I~G~G~iG~~la-~~L~~~g~~V~~id~~~~----~~~~-~~~~~~~~~~gd~~~~~~l~~~~~~-~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLV-RELTAAGKKVLAVDKSKE----KIEL-LEDEGFDAVIADPTDESFYRSLDLE-GVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHHHH-HHHHHTTCCEEEEESCHH----HHHH-HHHTTCEEEECCTTCHHHHHHSCCT-TCSEEEECCS
T ss_pred CEEEEECCCHHHHHHH-HHHHHCCCeEEEEECCHH----HHHH-HHHCCCcEEECCCCCHHHHHhCCcc-cCCEEEEecC
Confidence 4678888776443332 344456766655443221 1222 2334777777788888888876333 3678887555
No 284
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=24.60 E-value=2.7e+02 Score=25.74 Aligned_cols=53 Identities=21% Similarity=0.095 Sum_probs=33.2
Q ss_pred CCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCC--ccccHHHHHHHHHhCCC
Q 009167 273 MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL--RCVDVKLVSDLCHKKGA 327 (541)
Q Consensus 273 ~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG--~i~dl~~Ia~la~~~gi 327 (541)
.++++...|..|.+.++++++. +..|+.....++.. .+.-...+.+.|++.|+
T Consensus 45 ~~~~~~~~D~~d~~~l~~~~~~--~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 45 QGVEVRHGDYNQPESLQKAFAG--VSKLLFISGPHYDNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp TTCEEEECCTTCHHHHHHHTTT--CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCeEEEeccCCHHHHHHHHhc--CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCC
Confidence 3677777788899999999874 56665533322211 11223467788887775
No 285
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=24.45 E-value=72 Score=27.20 Aligned_cols=74 Identities=15% Similarity=0.244 Sum_probs=45.4
Q ss_pred CCcchHHHHHhhcccCCeEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhC---CCEEEEeC
Q 009167 258 CYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDG 333 (541)
Q Consensus 258 ~y~~~~~~~~~~l~~~Gi~v~~vd~-~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~---gi~lIvDe 333 (541)
.|.--..++...++..|.++.+.-. ..++++.+++.+.++.+|.++.-.. .....++++.+..++. ++.+++=.
T Consensus 15 ~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~lS~~~~--~~~~~~~~~i~~l~~~g~~~i~v~vGG 92 (137)
T 1ccw_A 15 CHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYG--QGEIDCKGLRQKCDEAGLEGILLYVGG 92 (137)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEEEECSS--THHHHHTTHHHHHHHTTCTTCEEEEEE
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEecCc--CcHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 3433345566678888999987643 3677777766544578888855552 2233456666666664 35566543
No 286
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=24.36 E-value=1e+02 Score=28.80 Aligned_cols=34 Identities=9% Similarity=-0.035 Sum_probs=28.8
Q ss_pred ceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEE
Q 009167 297 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 297 tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
+..|++|-. |..|.....+++.++|++||+.+|.
T Consensus 168 Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 168 PAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp SCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 567777765 6889999999999999999998873
No 287
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=24.22 E-value=54 Score=28.97 Aligned_cols=44 Identities=16% Similarity=0.091 Sum_probs=31.1
Q ss_pred HHHHhccCCCceEEEEeCCC--CCCCccccHHHHHHHHHhCCCEEEE
Q 009167 287 GLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 287 ~Le~al~~~~tklV~lesP~--NPtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
++.+.|.++++.+|+. +|. ++-....|...|.+.|-.|+++++.
T Consensus 73 ~I~d~I~~geIdlVIn-t~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 118 (152)
T 1b93_A 73 QVGALISEGKIDVLIF-FWDPLNAVPHDPDVKALLRLATVWNIPVAT 118 (152)
T ss_dssp HHHHHHHTTCCCEEEE-ECCTTSCCTTHHHHHHHHHHHHHTTCCEES
T ss_pred hHHHHHHCCCccEEEE-cCCcccCCcccccHHHHHHHHHHcCCCEEe
Confidence 5677777666887765 443 3222245778999999999999874
No 288
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=24.00 E-value=1.2e+02 Score=28.72 Aligned_cols=53 Identities=13% Similarity=0.065 Sum_probs=35.3
Q ss_pred ccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC-CE
Q 009167 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AI 328 (541)
Q Consensus 271 ~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g-i~ 328 (541)
...|+++...|..|.+.+.++++. +..|+...... .+.....+.+.|++.| +.
T Consensus 54 ~~~~v~~v~~D~~d~~~l~~~~~~--~d~vi~~a~~~---~~~~~~~l~~aa~~~g~v~ 107 (308)
T 1qyc_A 54 KASGANIVHGSIDDHASLVEAVKN--VDVVISTVGSL---QIESQVNIIKAIKEVGTVK 107 (308)
T ss_dssp HTTTCEEECCCTTCHHHHHHHHHT--CSEEEECCCGG---GSGGGHHHHHHHHHHCCCS
T ss_pred HhCCCEEEEeccCCHHHHHHHHcC--CCEEEECCcch---hhhhHHHHHHHHHhcCCCc
Confidence 345788877888899999999874 56666533221 1233467888888876 53
No 289
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=24.00 E-value=42 Score=31.37 Aligned_cols=103 Identities=11% Similarity=0.124 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHh-c-cCCCEEE--Ec-CCC-CcchHHHHHhhcccCCeEEEEeC
Q 009167 211 TTVVVEEKMSALEGAE---STVIMASGMSASTVMLLAL-V-PAGGHIV--TT-TDC-YRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~e---~~i~~sSGs~Ai~~al~al-l-~pGd~Vl--v~-~~~-y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
.++.|.+.+.+.+|.+ .+++++.|..+..+ +..+ . ..|=+++ ++ +|. -.+ . ..-.|+++.
T Consensus 67 ~V~~L~~~i~~~Lg~~~~~~V~IvGaG~lG~aL-a~~~~~~~~g~~iVg~~D~dp~~kiG------~-~~i~GvpV~--- 135 (212)
T 3keo_A 67 DVKKLMNFFAEILNDHSTTNVMLVGCGNIGRAL-LHYRFHDRNKMQISMAFDLDSNDLVG------K-TTEDGIPVY--- 135 (212)
T ss_dssp EHHHHHHHHHHHTTTTSCEEEEEECCSHHHHHH-TTCCCCTTSSEEEEEEEECTTSTTTT------C-BCTTCCBEE---
T ss_pred EHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHH-HHhhhcccCCeEEEEEEeCCchhccC------c-eeECCeEEe---
Confidence 5889999999999863 47888888754432 2221 1 2232332 22 221 111 1 012366554
Q ss_pred CCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEe
Q 009167 282 PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 282 ~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvD 332 (541)
+.+++++.+++.++..++++.|+. ..+++++.+.+.|+.-|..
T Consensus 136 --~~~dL~~~v~~~~Id~vIIAvPs~------~aq~v~d~lv~~GIk~I~n 178 (212)
T 3keo_A 136 --GISTINDHLIDSDIETAILTVPST------EAQEVADILVKAGIKGILS 178 (212)
T ss_dssp --EGGGHHHHC-CCSCCEEEECSCGG------GHHHHHHHHHHHTCCEEEE
T ss_pred --CHHHHHHHHHHcCCCEEEEecCch------hHHHHHHHHHHcCCCEEEE
Confidence 246778888776688999988873 3568999999989877765
No 290
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=23.97 E-value=66 Score=29.21 Aligned_cols=44 Identities=18% Similarity=0.192 Sum_probs=31.6
Q ss_pred HHHHhccCCCceEEEEeCCC--CCCCccccHHHHHHHHHhCCCEEEE
Q 009167 287 GLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 287 ~Le~al~~~~tklV~lesP~--NPtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
++.+.|.++++.+|+. +|. ++-....|...|.+.|-.++++++.
T Consensus 89 qI~d~I~~geIdlVIn-t~dPl~~~~h~~D~~~IRR~A~~~~IP~~T 134 (178)
T 1vmd_A 89 QIGAMIAEGKIDVLIF-FWDPLEPQAHDVDVKALIRIATVYNIPVAI 134 (178)
T ss_dssp HHHHHHHTTSCCEEEE-ECCSSSCCTTSCCHHHHHHHHHHTTCCEES
T ss_pred hHHHHHHCCCccEEEE-ccCccCCCcccccHHHHHHHHHHcCCCEEe
Confidence 5667777666887765 443 4333256889999999999999874
No 291
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=23.92 E-value=2.8e+02 Score=25.31 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=25.4
Q ss_pred CCccccHHHHHHHHHh--CCCEEEEeCCCCCCCcccccccCCcEEEE
Q 009167 309 FLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLH 353 (541)
Q Consensus 309 tG~i~dl~~Ia~la~~--~gi~lIvDea~a~~~~~~~~~~gaDivv~ 353 (541)
.|...++-++++.+++ .|+.+|.= +.....++..-+|+++.
T Consensus 116 SG~t~~~i~~~~~ak~~~~Ga~vI~I----T~~~~s~La~~aD~~l~ 158 (220)
T 3etn_A 116 SGKTREIVELTQLAHNLNPGLKFIVI----TGNPDSPLASESDVCLS 158 (220)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCEEEEE----ESCTTSHHHHHSSEEEE
T ss_pred CCCCHHHHHHHHHHHhcCCCCeEEEE----ECCCCChhHHhCCEEEE
Confidence 4666777888999999 99766531 11122344444777764
No 292
>1lu0_A CMTI-I, trypsin inhibitor I; serine protease inhibitor, metal coordination, hydrolase INH; 1.03A {Cucurbita maxima} SCOP: g.3.2.1 PDB: 2v1v_A 1cti_A 1ppe_I 2cti_A 2sta_I 3cti_A 2btc_I 2stb_I 2eti_A 2it7_A
Probab=23.76 E-value=17 Score=22.62 Aligned_cols=15 Identities=40% Similarity=0.855 Sum_probs=12.4
Q ss_pred cccccccccCCCCcccccCCCCC
Q 009167 7 SSQKILSFSSSCSSFECRSDPDF 29 (541)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (541)
.|||++ .+|..|.|-
T Consensus 2 ~CPrIl--------m~CK~DsDC 16 (29)
T 1lu0_A 2 VCPRIL--------LECKKDSDC 16 (29)
T ss_dssp CCCSCC--------CBCSSGGGS
T ss_pred CCchhh--------hhccccccc
Confidence 389999 899998874
No 293
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=23.55 E-value=1e+02 Score=29.10 Aligned_cols=125 Identities=12% Similarity=0.084 Sum_probs=60.6
Q ss_pred CCCchhHHHHHHHHHHHh---C---CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcc-cCCeEEE
Q 009167 206 RYGNPTTVVVEEKMSALE---G---AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITAT 278 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~---g---~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~-~~Gi~v~ 278 (541)
|.-||....|...|-+-+ + ++.++-+.+|+......+.-.+.+..+|+.-+..-.....+. ..++ .-++...
T Consensus 53 r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~-~~a~~~~ni~~V 131 (233)
T 4df3_A 53 REWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLL-TVVRDRRNIFPI 131 (233)
T ss_dssp EECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHH-HHSTTCTTEEEE
T ss_pred eeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-HhhHhhcCeeEE
Confidence 334676666654443211 1 234556666664444444455677778877766544433332 3333 3356665
Q ss_pred EeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEEeCC
Q 009167 279 VIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 279 ~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIvDea 334 (541)
..+..+++...... . .+.+||...+. |--...-+.++.++.+.-|.++|++..
T Consensus 132 ~~d~~~p~~~~~~~-~-~vDvVf~d~~~-~~~~~~~l~~~~r~LKpGG~lvI~ik~ 184 (233)
T 4df3_A 132 LGDARFPEKYRHLV-E-GVDGLYADVAQ-PEQAAIVVRNARFFLRDGGYMLMAIKA 184 (233)
T ss_dssp ESCTTCGGGGTTTC-C-CEEEEEECCCC-TTHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEeccCcccccccc-c-eEEEEEEeccC-ChhHHHHHHHHHHhccCCCEEEEEEec
Confidence 55655665543222 2 36677764433 311001133334444444666665543
No 294
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=23.44 E-value=1.4e+02 Score=29.52 Aligned_cols=68 Identities=18% Similarity=0.265 Sum_probs=41.5
Q ss_pred CCEEEEcCCCCcchHHHHHhhcccCCeEEEEeCC------C---CHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHH
Q 009167 249 GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------A---DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (541)
Q Consensus 249 Gd~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~------~---d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia 319 (541)
+..+++..+.|+ .+++.+|++...+.. . ++.+|.+.++++++++||.|.-.++ +.+.
T Consensus 204 ~r~~v~~H~af~-------Yfa~~yGL~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~~ 269 (321)
T 1xvl_A 204 QRFLVSCEGAFS-------YLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQK 269 (321)
T ss_dssp GCEEEEEESTTH-------HHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHH
T ss_pred CCEEEEECchHH-------HHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCCh-------HHHH
Confidence 457777655553 234567777655421 1 3555666666667899998665543 2334
Q ss_pred HHHHhCCCEEE
Q 009167 320 DLCHKKGAIVC 330 (541)
Q Consensus 320 ~la~~~gi~lI 330 (541)
.++++.|+.++
T Consensus 270 ~iA~e~g~~v~ 280 (321)
T 1xvl_A 270 QVAQATGARFG 280 (321)
T ss_dssp HHHTTTCCEEE
T ss_pred HHHHhcCCcee
Confidence 56788888775
No 295
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=23.03 E-value=1.9e+02 Score=27.93 Aligned_cols=96 Identities=16% Similarity=0.086 Sum_probs=54.3
Q ss_pred EEEEcCCCCcchHHHHHhhcccCCeEEEEeCC-CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEE
Q 009167 251 HIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV 329 (541)
Q Consensus 251 ~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~-~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~l 329 (541)
+|++....|.+....+...-+..++.+..-|. .|+.++.++..-+ ...|.+.... ..-..++++.+.|++.|..+
T Consensus 97 sVltd~~~f~Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~G-AD~VlLi~a~---L~~~~l~~l~~~a~~lGl~~ 172 (272)
T 3tsm_A 97 SVLTDTPSFQGAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWG-ADCILIIMAS---VDDDLAKELEDTAFALGMDA 172 (272)
T ss_dssp EEECCSTTTCCCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTT-CSEEEEETTT---SCHHHHHHHHHHHHHTTCEE
T ss_pred EEeccccccCCCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcC-CCEEEEcccc---cCHHHHHHHHHHHHHcCCeE
Confidence 45555555556665555544445565544343 4666777766553 6677763332 12234778888999999988
Q ss_pred EEeCCCCCCCcccccccCCcEE
Q 009167 330 CIDGTFATPLNQKALSLGADLV 351 (541)
Q Consensus 330 IvDea~a~~~~~~~~~~gaDiv 351 (541)
++|-.-.. -.......|+|++
T Consensus 173 lvevh~~e-El~~A~~~ga~iI 193 (272)
T 3tsm_A 173 LIEVHDEA-EMERALKLSSRLL 193 (272)
T ss_dssp EEEECSHH-HHHHHTTSCCSEE
T ss_pred EEEeCCHH-HHHHHHhcCCCEE
Confidence 88743110 0123345566654
No 296
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=22.42 E-value=1.4e+02 Score=28.52 Aligned_cols=55 Identities=15% Similarity=0.155 Sum_probs=37.0
Q ss_pred cCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC-CEEEE
Q 009167 272 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-AIVCI 331 (541)
Q Consensus 272 ~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g-i~lIv 331 (541)
..++++...|..|.+.+.++++. +..|+..... . .+.-...+.+.|++.| +.-++
T Consensus 55 ~~~v~~v~~D~~d~~~l~~a~~~--~d~vi~~a~~--~-~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 55 SMGVTIIEGEMEEHEKMVSVLKQ--VDIVISALPF--P-MISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp HTTCEEEECCTTCHHHHHHHHTT--CSEEEECCCG--G-GSGGGHHHHHHHHHHCCCCEEE
T ss_pred cCCcEEEEecCCCHHHHHHHHcC--CCEEEECCCc--c-chhhHHHHHHHHHHhCCccEEe
Confidence 35788888898899999999974 5666653322 1 1334567888888877 64333
No 297
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=22.40 E-value=3.5e+02 Score=22.71 Aligned_cols=95 Identities=16% Similarity=0.135 Sum_probs=50.5
Q ss_pred CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcc-cCCeEEEEeCCCCHHHHHHh-ccCCCceEEEE
Q 009167 225 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITATVIDPADMEGLEAA-LNNNNVSLFFT 302 (541)
Q Consensus 225 ~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~-~~Gi~v~~vd~~d~e~Le~a-l~~~~tklV~l 302 (541)
....++++.|.-+..++. .+.+.|-.|++.+..-.. + ..+. ..|..+...+..+.+.++++ +.. ..+|++
T Consensus 19 ~~~v~IiG~G~iG~~la~-~L~~~g~~V~vid~~~~~----~-~~~~~~~g~~~~~~d~~~~~~l~~~~~~~--ad~Vi~ 90 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIAN-LASSSGHSVVVVDKNEYA----F-HRLNSEFSGFTVVGDAAEFETLKECGMEK--ADMVFA 90 (155)
T ss_dssp CCEEEEECCSHHHHHHHH-HHHHTTCEEEEEESCGGG----G-GGSCTTCCSEEEESCTTSHHHHHTTTGGG--CSEEEE
T ss_pred CCcEEEECCCHHHHHHHH-HHHhCCCeEEEEECCHHH----H-HHHHhcCCCcEEEecCCCHHHHHHcCccc--CCEEEE
Confidence 356788888875544332 334456666554432211 1 2233 55666655566677777654 432 578887
Q ss_pred eCCCCCCCccccHHHHHHHHHh-CC-CEEEEe
Q 009167 303 ESPTNPFLRCVDVKLVSDLCHK-KG-AIVCID 332 (541)
Q Consensus 303 esP~NPtG~i~dl~~Ia~la~~-~g-i~lIvD 332 (541)
+.++. .....+.+++++ .+ ..++..
T Consensus 91 ~~~~~-----~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 91 FTNDD-----STNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp CSSCH-----HHHHHHHHHHHHTSCCSEEEEE
T ss_pred EeCCc-----HHHHHHHHHHHHHCCCCeEEEE
Confidence 66541 123455566665 44 344443
No 298
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=22.25 E-value=1e+02 Score=28.29 Aligned_cols=81 Identities=16% Similarity=0.225 Sum_probs=50.6
Q ss_pred CCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEE--eCCCCCCCcccccccCCcEEEECCccccC
Q 009167 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI--DGTFATPLNQKALSLGADLVLHSATKFIG 360 (541)
Q Consensus 283 ~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIv--Dea~a~~~~~~~~~~gaDivv~S~sK~lg 360 (541)
.+.++|+++++.. ...||+ -+|.+..++++.+.++++|-.+++ |-..+ +..+ +.+.+++ .+..+
T Consensus 17 r~~~~l~~al~s~-~~~ifl-----l~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~G--ls~d--~~ai~fL----~~~~~ 82 (192)
T 3kts_A 17 HNQKDMEKILELD-LTYMVM-----LETHVAQLKALVKYAQAGGKKVLLHADLVNG--LKND--DYAIDFL----CTEIC 82 (192)
T ss_dssp SSSHHHHHHTTSS-CCEEEE-----CSEETTTHHHHHHHHHHTTCEEEEEGGGEET--CCCS--HHHHHHH----HHTTC
T ss_pred cCHHHHHHHHcCC-CCEEEE-----ecCcHHHHHHHHHHHHHcCCeEEEecCchhc--cCCc--HHHHHHH----HhCCC
Confidence 4778999999764 778887 357888999999999999855544 43322 1111 1122222 23333
Q ss_pred CCCCceEEEEEeChHHHHHHHH
Q 009167 361 GHNDVLAGSISGSGKLVTQIRN 382 (541)
Q Consensus 361 g~gd~~gG~lv~~~~li~~l~~ 382 (541)
+ -|++..+...+...++
T Consensus 83 p-----dGIIsTk~~~i~~Ak~ 99 (192)
T 3kts_A 83 P-----DGIISTRGNAIMKAKQ 99 (192)
T ss_dssp C-----SEEEESCHHHHHHHHH
T ss_pred C-----CEEEeCcHHHHHHHHH
Confidence 2 3677777777776654
No 299
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=22.14 E-value=2.4e+02 Score=25.32 Aligned_cols=124 Identities=14% Similarity=0.201 Sum_probs=61.9
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCeE--EEEeCCCCH
Q 009167 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPADM 285 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~e~~i~~sSGs~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~Gi~--v~~vd~~d~ 285 (541)
-.+....+-..++...+...++=+++|+......+...+.++.+|+..+..-. .....+..++..|+. +.++.. |.
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~~-d~ 119 (221)
T 3u81_A 42 VGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPD-CAAITQQMLNFAGLQDKVTILNG-AS 119 (221)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHH-HHHHHHHHHHHHTCGGGEEEEES-CH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChH-HHHHHHHHHHHcCCCCceEEEEC-CH
Confidence 44556666666666667677777777664444444444556777777665432 223333333333431 444332 33
Q ss_pred HHHHHhccC----CCceEEEEeCCCCCCCccccHHHHHHHHH--hCCCEEEEeCCCC
Q 009167 286 EGLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCH--KKGAIVCIDGTFA 336 (541)
Q Consensus 286 e~Le~al~~----~~tklV~lesP~NPtG~i~dl~~Ia~la~--~~gi~lIvDea~a 336 (541)
.++...+.. ....+|++.... ....+..++.+.++ +.|..+++|++..
T Consensus 120 ~~~l~~~~~~~~~~~fD~V~~d~~~---~~~~~~~~~~~~~~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 120 QDLIPQLKKKYDVDTLDMVFLDHWK---DRYLPDTLLLEKCGLLRKGTVLLADNVIV 173 (221)
T ss_dssp HHHGGGTTTTSCCCCCSEEEECSCG---GGHHHHHHHHHHTTCCCTTCEEEESCCCC
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCc---ccchHHHHHHHhccccCCCeEEEEeCCCC
Confidence 332222221 236788884322 22222223333222 2467888888754
No 300
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=21.52 E-value=43 Score=34.63 Aligned_cols=32 Identities=9% Similarity=0.043 Sum_probs=27.4
Q ss_pred CCCCCCccccHHHHHHHHHhCCCEEEEeCCCC
Q 009167 305 PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 305 P~NPtG~i~dl~~Ia~la~~~gi~lIvDea~a 336 (541)
++...|...+++++++.||++|+.||+|-++.
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 44457888899999999999999999998853
No 301
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=21.47 E-value=2.4e+02 Score=28.11 Aligned_cols=100 Identities=9% Similarity=0.102 Sum_probs=53.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCC--CEEEEcC--CCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEE
Q 009167 226 ESTVIMASGMSASTVMLLALVPAG--GHIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (541)
Q Consensus 226 e~~i~~sSGs~Ai~~al~all~pG--d~Vlv~~--~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~ 301 (541)
...|++-+.+.....+|....+.| -+|++.. |.+.| +. ....|...|++++++...- +...+ . ++.+|+
T Consensus 142 g~~ILTh~~S~tvl~~l~~A~~~gk~~~V~v~EtRP~~qG-rl-tA~eL~~~GI~vtlI~Dsa---~~~~M-~-~Vd~Vi 214 (338)
T 3a11_A 142 GDVIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQG-KI-TAKELASYGIPVIYVVDSA---ARHYM-K-MTDKVV 214 (338)
T ss_dssp TCEEEECSCCHHHHHHHHHHHHTTCCCEEEEECCTTTTHH-HH-HHHHHHHTTCCEEEECGGG---TTTTG-G-GCSEEE
T ss_pred CCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEeCCCCchhh-HH-HHHHHHhCCCCEEEEehHH---HHHHH-H-hCCEEE
Confidence 356665433322223444444444 3666654 55666 33 3344667799998875321 12223 2 366676
Q ss_pred EeCCC-CCCCcccc---HHHHHHHHHhCCCEEEEe
Q 009167 302 TESPT-NPFLRCVD---VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 302 lesP~-NPtG~i~d---l~~Ia~la~~~gi~lIvD 332 (541)
+-.=. -..|.+.. --.++-+|+.+|++++|=
T Consensus 215 vGAd~V~anG~v~NKiGT~~lAl~Ak~~~vPfyV~ 249 (338)
T 3a11_A 215 MGADSITVNGAVINKIGTALIALTAKEHRVWTMIA 249 (338)
T ss_dssp ECCSEECTTSCEEEETTHHHHHHHHHHTTCEEEEE
T ss_pred ECccEEecCCCEeecccHHHHHHHHHHcCCCEEEe
Confidence 62210 12344433 347788899999999884
No 302
>1mct_I Trypsin inhibitor A; complex(proteinase/inhibitor); 1.60A {Momordica charantia} SCOP: g.3.2.1 PDB: 1f2s_I
Probab=21.35 E-value=19 Score=22.28 Aligned_cols=15 Identities=33% Similarity=0.654 Sum_probs=12.3
Q ss_pred cccccccccCCCCcccccCCCCC
Q 009167 7 SSQKILSFSSSCSSFECRSDPDF 29 (541)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (541)
.|||++ .+|..|.|-
T Consensus 2 ~CPrIl--------m~Ck~DsDC 16 (28)
T 1mct_I 2 ICPRIW--------MECTRDSDC 16 (28)
T ss_dssp CEECCC--------CBCSSGGGS
T ss_pred CCchhh--------hhccccccc
Confidence 389999 899988874
No 303
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=20.77 E-value=1.2e+02 Score=25.33 Aligned_cols=54 Identities=11% Similarity=0.172 Sum_probs=32.5
Q ss_pred CCeEEEEeCCCCHHHHHHhccCC---------Cce-EEEEeCCCCCCCccccHHHHHHHHHhCCCEEE
Q 009167 273 MGITATVIDPADMEGLEAALNNN---------NVS-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 273 ~Gi~v~~vd~~d~e~Le~al~~~---------~tk-lV~lesP~NPtG~i~dl~~Ia~la~~~gi~lI 330 (541)
+++.+..+...|++.|.+.+++. +.. +|-+.... ...++.+|.++++++|+.+|
T Consensus 15 ~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 15 FTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred eeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 45555555566777766655321 122 22232222 23689999999999998775
No 304
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=20.44 E-value=3.5e+02 Score=24.41 Aligned_cols=90 Identities=9% Similarity=-0.037 Sum_probs=47.1
Q ss_pred EEEeCCHHHHHH-HHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCeEEEEeCCCCHHHHHHhccCCCceEEEEeCC
Q 009167 228 TVIMASGMSAST-VMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (541)
Q Consensus 228 ~i~~sSGs~Ai~-~al~all~pG-d~Vlv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d~e~Le~al~~~~tklV~lesP 305 (541)
.+++++|+..+- .++..|++.| -+|++..-.-.. . ..+...++++...|..|.++++++++. +.+|+.+..
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~----~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~vv~~a~ 97 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK----I-HKPYPTNSQIIMGDVLNHAALKQAMQG--QDIVYANLT 97 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGG----S-CSSCCTTEEEEECCTTCHHHHHHHHTT--CSEEEEECC
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhh----h-cccccCCcEEEEecCCCHHHHHHHhcC--CCEEEEcCC
Confidence 344544443232 2345567788 455553221111 0 112233677777788899999999874 566664332
Q ss_pred CCCCCccccHHHHHHHHHhCC
Q 009167 306 TNPFLRCVDVKLVSDLCHKKG 326 (541)
Q Consensus 306 ~NPtG~i~dl~~Ia~la~~~g 326 (541)
. .......+.+.+.+++.+
T Consensus 98 ~--~~~~~~~~~~~~~~~~~~ 116 (236)
T 3qvo_A 98 G--EDLDIQANSVIAAMKACD 116 (236)
T ss_dssp S--TTHHHHHHHHHHHHHHTT
T ss_pred C--CchhHHHHHHHHHHHHcC
Confidence 1 112223456666676654
No 305
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=20.36 E-value=1.3e+02 Score=25.39 Aligned_cols=48 Identities=25% Similarity=0.181 Sum_probs=32.5
Q ss_pred EEEeCCCCHHHHHHhcc-CCCceEEEEeCCCCCCCccccHHHHHHHHHhCCCEEEE
Q 009167 277 ATVIDPADMEGLEAALN-NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 277 v~~vd~~d~e~Le~al~-~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
+..+..+..+.+..++. .+ +.+|++ ||...+-+++.++|+++|++++.
T Consensus 55 l~I~~G~r~~~~l~a~~~~~-~~~iIl------t~g~~~~~~i~~~A~~~~ipvl~ 103 (139)
T 2ioj_A 55 ALVTGGDRSDLLLTALEMPN-VRCLIL------TGNLEPVQLVLTKAEERGVPVIL 103 (139)
T ss_dssp EEEEETTCHHHHHHHTTCTT-EEEEEE------ETTCCCCHHHHHHHHHHTCCEEE
T ss_pred EEEEcCCHHHHHHHHHhCCC-CcEEEE------cCCCCCCHHHHHHHHHCCCeEEE
Confidence 33343555565666676 53 888887 34445667888999999998875
No 306
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=20.27 E-value=1.7e+02 Score=30.44 Aligned_cols=94 Identities=9% Similarity=-0.034 Sum_probs=62.2
Q ss_pred HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCC-eEEEEeCC--CCHHHHHHhccCCCceEEEEeCCCCCCCcc
Q 009167 236 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG-ITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 236 ~Ai~~al~all~pGd~Vlv~~~~y~~~~~~~~~~l~~~G-i~v~~vd~--~d~e~Le~al~~~~tklV~lesP~NPtG~i 312 (541)
+++... ..++++-+-+.+.+|....-+..+..+.+..+ +.+.--+. .+++.+++.++.+-...|.+ -+ |-.|.+
T Consensus 283 elid~y-~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlI-Kv-nqiGGI 359 (441)
T 3qtp_A 283 GLIAEY-VDYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLI-KV-NQIGTL 359 (441)
T ss_dssp HHHHHH-HHHHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEE-CG-GGTCCH
T ss_pred HHHHHH-HHHhhhcceeeecCCCChHHHHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEe-cc-cccccH
Confidence 444333 33444455778888887666666655555565 55543232 36888888887543556665 33 357888
Q ss_pred ccHHHHHHHHHhCCCEEEEe
Q 009167 313 VDVKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 313 ~dl~~Ia~la~~~gi~lIvD 332 (541)
.+.-+++++|+++|+.+++=
T Consensus 360 TEalkaa~lA~~~G~~vmvs 379 (441)
T 3qtp_A 360 TETFKTIKMAQEKGWGVMAS 379 (441)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCeEEEe
Confidence 88889999999999988763
No 307
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=20.25 E-value=1.2e+02 Score=28.06 Aligned_cols=35 Identities=6% Similarity=-0.091 Sum_probs=29.5
Q ss_pred ceEEEEeCC-CCCCCccccHHHHHHHHHhCCCEEEE
Q 009167 297 VSLFFTESP-TNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 297 tklV~lesP-~NPtG~i~dl~~Ia~la~~~gi~lIv 331 (541)
+..|++|-. -|+.|.....+++.++|++||+.++.
T Consensus 159 Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 159 PAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp SBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred ceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 567877773 46889999999999999999998873
No 308
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=20.24 E-value=3.3e+02 Score=26.60 Aligned_cols=51 Identities=12% Similarity=0.081 Sum_probs=32.0
Q ss_pred CeEEEEeC-CCCHHHHHHhccCCCceEEEEeCCCCCCCccccHHHHHHHHHhCC
Q 009167 274 GITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 326 (541)
Q Consensus 274 Gi~v~~vd-~~d~e~Le~al~~~~tklV~lesP~NPtG~i~dl~~Ia~la~~~g 326 (541)
++++...| ..|.+.++++++. +..|+................+.+.|++.|
T Consensus 52 ~v~~v~~D~l~d~~~l~~~~~~--~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g 103 (352)
T 1xgk_A 52 NVTLFQGPLLNNVPLMDTLFEG--AHLAFINTTSQAGDEIAIGKDLADAAKRAG 103 (352)
T ss_dssp TEEEEESCCTTCHHHHHHHHTT--CSEEEECCCSTTSCHHHHHHHHHHHHHHHS
T ss_pred CcEEEECCccCCHHHHHHHHhc--CCEEEEcCCCCCcHHHHHHHHHHHHHHHcC
Confidence 67777778 8899999998864 566665332211111112357788888777
Done!