Your job contains 1 sequence.
>009168
MDSTTETLQHHALSVKLWPPSQSTRLMLVQRMTKNLTTPSIFSRKYGLLSKEEAEEDAKQ
IEELAFAAANQHYEKEPDGDGSSSVQIYAKESSKLMLEVIKRGPRTKEDGEEMIAEKATA
ASQTVFDISGGQRGFIEEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLI
KDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLK
SQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA
LEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEV
YLSYLNLEDEGAEALAGALKECAPSLEVLDLAGNDITAKAASSLAACIALKQFLTKLNLA
ENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNF
IPDEGIDEVKEILKHSLDVLGPLDENDPEGEDYDDGAEEDDADIRNDLDSKLKELHINKE
E
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009168
(541 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2099207 - symbol:RANGAP1 "AT3G63130" species:3... 1608 3.0e-165 1
TAIR|locus:2150285 - symbol:RANGAP2 "AT5G19320" species:3... 1521 4.9e-156 1
TAIR|locus:2083028 - symbol:AT3G06000 species:3702 "Arabi... 292 2.1e-25 1
UNIPROTKB|Q7RTR2 - symbol:NLRC3 "Protein NLRC3" species:9... 265 1.6e-19 1
MGI|MGI:2444070 - symbol:Nlrc3 "NLR family, CARD domain c... 255 2.0e-18 1
TAIR|locus:2194604 - symbol:emb2004 "embryo defective 200... 244 1.3e-17 1
MGI|MGI:3612191 - symbol:Nlrc5 "NLR family, CARD domain c... 229 3.2e-15 1
ASPGD|ASPL0000071633 - symbol:ranGAP species:162425 "Emer... 152 1.5e-14 2
UNIPROTKB|P46060 - symbol:RANGAP1 "Ran GTPase-activating ... 202 5.6e-13 1
MGI|MGI:1921935 - symbol:4930451C15Rik "RIKEN cDNA 493045... 197 7.7e-13 1
UNIPROTKB|F1MAA5 - symbol:Rangap1 "Protein Rangap1" speci... 200 9.3e-13 1
UNIPROTKB|O13066 - symbol:rangap1 "Ran GTPase-activating ... 199 1.2e-12 1
ZFIN|ZDB-GENE-040426-1921 - symbol:rangap1b "Ran GTPase a... 196 2.5e-12 1
UNIPROTKB|F1NIE8 - symbol:RANGAP1 "Uncharacterized protei... 194 4.2e-12 1
UNIPROTKB|Q9M7N6 - symbol:MAF1 "MFP1 attachment factor 1"... 170 5.3e-12 1
UNIPROTKB|F1MFD5 - symbol:RANGAP1 "Uncharacterized protei... 191 9.2e-12 1
UNIPROTKB|F1PVY6 - symbol:RANGAP1 "Uncharacterized protei... 190 1.3e-11 1
ZFIN|ZDB-GENE-081028-16 - symbol:si:ch211-233m11.1 "si:ch... 193 1.4e-11 1
UNIPROTKB|J9NZ28 - symbol:RANGAP1 "Uncharacterized protei... 190 1.4e-11 1
UNIPROTKB|H0Y4Q3 - symbol:RANGAP1 "Ran GTPase-activating ... 173 4.5e-11 1
CGD|CAL0000022 - symbol:RNA1 species:5476 "Candida albica... 179 9.6e-11 1
ZFIN|ZDB-GENE-050208-711 - symbol:si:ch211-213a13.5 "si:c... 189 1.3e-10 1
TAIR|locus:2036736 - symbol:WPP2 "AT1G47200" species:3702... 153 3.7e-10 1
UNIPROTKB|F8W7I9 - symbol:RANGAP1 "Ran GTPase-activating ... 175 4.5e-10 1
UNIPROTKB|Q86WI3 - symbol:NLRC5 "Protein NLRC5" species:9... 188 5.6e-10 2
UNIPROTKB|E1B9F2 - symbol:E1B9F2 "Uncharacterized protein... 179 9.4e-10 1
ZFIN|ZDB-GENE-060929-492 - symbol:rangap1a "RAN GTPase ac... 171 1.4e-09 1
RGD|1310380 - symbol:Rangap1 "RAN GTPase activating prote... 167 2.3e-09 1
WB|WBGene00004303 - symbol:ran-2 species:6239 "Caenorhabd... 154 4.0e-09 2
MGI|MGI:98640 - symbol:Tcte1 "t-complex-associated testis... 164 6.5e-09 1
TAIR|locus:2167831 - symbol:WPP1 "WPP domain protein 1" s... 141 7.3e-09 1
MGI|MGI:103071 - symbol:Rangap1 "RAN GTPase activating pr... 164 8.7e-09 1
ZFIN|ZDB-GENE-060421-8264 - symbol:zgc:136791 "zgc:136791... 166 1.0e-08 1
UNIPROTKB|Q9Y239 - symbol:NOD1 "Nucleotide-binding oligom... 164 1.7e-08 1
UNIPROTKB|E1B7V7 - symbol:NOD1 "Uncharacterized protein" ... 164 1.7e-08 1
UNIPROTKB|E1BR67 - symbol:NOD1 "Uncharacterized protein" ... 163 2.2e-08 1
FB|FBgn0003346 - symbol:RanGAP "Ran GTPase activating pro... 158 4.0e-08 1
MGI|MGI:1195456 - symbol:Rnh1 "ribonuclease/angiogenin in... 155 5.5e-08 1
UNIPROTKB|E1C3J0 - symbol:LOC100859479 "Uncharacterized p... 149 9.6e-08 2
POMBASE|SPAC22E12.07 - symbol:rna1 "Ran GAP Rna1" species... 151 1.1e-07 1
UNIPROTKB|E2R9L3 - symbol:NOD1 "Uncharacterized protein" ... 156 1.3e-07 1
ZFIN|ZDB-GENE-081028-46 - symbol:si:ch211-278p9.1 "si:ch2... 155 2.0e-07 1
UNIPROTKB|Q5ZIY8 - symbol:RNH1 "Uncharacterized protein" ... 149 2.5e-07 1
DICTYBASE|DDB_G0292386 - symbol:carmil "leucine-rich repe... 152 4.0e-07 1
ZFIN|ZDB-GENE-080207-2 - symbol:zgc:174944 "zgc:174944" s... 146 6.3e-07 2
RGD|621398 - symbol:Rnh1 "ribonuclease/angiogenin inhibit... 145 7.0e-07 1
RGD|2321956 - symbol:LOC100360501 "ribonuclease inhibitor... 145 7.0e-07 1
MGI|MGI:2429397 - symbol:Nod2 "nucleotide-binding oligome... 149 8.2e-07 1
ZFIN|ZDB-GENE-070912-120 - symbol:si:ch211-156p11.1 "si:c... 148 8.6e-07 1
RGD|1562269 - symbol:Nod1 "nucleotide-binding oligomeriza... 156 1.1e-06 2
UNIPROTKB|F1P9K0 - symbol:NOD2 "Uncharacterized protein" ... 146 1.7e-06 1
ZFIN|ZDB-GENE-050208-7 - symbol:ppp1r37 "protein phosphat... 145 1.9e-06 1
ZFIN|ZDB-GENE-081028-33 - symbol:si:ch211-236p5.2 "si:ch2... 146 2.3e-06 1
ZFIN|ZDB-GENE-081103-38 - symbol:si:ch211-271g18.1 "si:ch... 144 3.0e-06 1
SGD|S000004848 - symbol:RNA1 "GTPase activating protein (... 138 3.4e-06 1
RGD|1565052 - symbol:Lrrc34 "leucine rich repeat containi... 138 3.5e-06 1
ZFIN|ZDB-GENE-061108-4 - symbol:nod2 "nucleotide-binding ... 142 4.5e-06 1
MGI|MGI:1919077 - symbol:Lrrc34 "leucine rich repeat cont... 137 4.5e-06 1
UNIPROTKB|Q9HC29 - symbol:NOD2 "Nucleotide-binding oligom... 147 6.3e-06 2
UNIPROTKB|P10775 - symbol:RNH1 "Ribonuclease inhibitor" s... 136 6.9e-06 1
ZFIN|ZDB-GENE-110913-19 - symbol:si:dkey-156k2.3 "si:dkey... 141 7.7e-06 1
MGI|MGI:1341839 - symbol:Nod1 "nucleotide-binding oligome... 148 8.1e-06 2
ZFIN|ZDB-GENE-110913-10 - symbol:si:ch73-289h5.4 "si:ch73... 140 9.2e-06 1
UNIPROTKB|Q53B88 - symbol:NOD2 "Nucleotide-binding oligom... 147 1.0e-05 2
UNIPROTKB|G3MYV6 - symbol:Bt.111263 "Uncharacterized prot... 139 1.0e-05 1
RGD|1595870 - symbol:Ppp1r37 "protein phosphatase 1, regu... 137 1.0e-05 1
RGD|1306368 - symbol:Nod2 "nucleotide-binding oligomeriza... 138 1.3e-05 1
UNIPROTKB|O75864 - symbol:PPP1R37 "Protein phosphatase 1 ... 135 1.7e-05 1
UNIPROTKB|A7Z026 - symbol:PPP1R37 "Protein phosphatase 1 ... 135 1.7e-05 1
UNIPROTKB|E2RI72 - symbol:PPP1R37 "Uncharacterized protei... 135 1.7e-05 1
MGI|MGI:2687042 - symbol:Ppp1r37 "protein phosphatase 1, ... 135 1.7e-05 1
UNIPROTKB|F1PS92 - symbol:NLRP9 "Uncharacterized protein"... 123 2.0e-05 2
ZFIN|ZDB-GENE-080206-3 - symbol:zgc:174178 "zgc:174178" s... 136 2.0e-05 1
UNIPROTKB|F1PK29 - symbol:RNH1 "Uncharacterized protein" ... 130 3.1e-05 1
UNIPROTKB|E9PIM9 - symbol:RNH1 "Ribonuclease inhibitor" s... 87 3.2e-05 2
UNIPROTKB|Q6E804 - symbol:NOD2 "Nucleotide-binding oligom... 134 3.5e-05 1
UNIPROTKB|D4A5W3 - symbol:Nod2 "Caspase recruitment domai... 133 4.0e-05 1
UNIPROTKB|Q7RTR0 - symbol:NLRP9 "NACHT, LRR and PYD domai... 111 5.7e-05 2
UNIPROTKB|E9PMJ3 - symbol:RNH1 "Ribonuclease inhibitor" s... 83 7.5e-05 2
UNIPROTKB|F1NAC7 - symbol:F1NAC7 "Uncharacterized protein... 129 8.4e-05 1
UNIPROTKB|E9PLZ3 - symbol:RNH1 "Ribonuclease inhibitor" s... 83 8.5e-05 2
UNIPROTKB|E9PFE0 - symbol:CIITA "MHC class II transactiva... 127 8.8e-05 1
RGD|1309415 - symbol:Nlrp12 "NLR family, pyrin domain con... 111 0.00010 2
MGI|MGI:108445 - symbol:Ciita "class II transactivator" s... 130 0.00011 1
TAIR|locus:2143749 - symbol:WPP3 "AT5G27940" species:3702... 110 0.00011 1
UNIPROTKB|Q86W24 - symbol:NLRP14 "NACHT, LRR and PYD doma... 121 0.00011 2
UNIPROTKB|P59047 - symbol:NLRP5 "NACHT, LRR and PYD domai... 130 0.00011 1
MGI|MGI:1345193 - symbol:Nlrp5 "NLR family, pyrin domain ... 129 0.00014 1
RGD|1560291 - symbol:RGD1560291 "similar to NACHT, leucin... 94 0.00015 2
DICTYBASE|DDB_G0285563 - symbol:DDB_G0285563 "unknown" sp... 120 0.00016 1
UNIPROTKB|F1PS72 - symbol:NLRP13 "Uncharacterized protein... 118 0.00021 2
UNIPROTKB|P33076 - symbol:CIITA "MHC class II transactiva... 127 0.00023 1
UNIPROTKB|E1B8B1 - symbol:LRRC45 "Uncharacterized protein... 124 0.00024 1
UNIPROTKB|F1MKL3 - symbol:NLRP9 "NACHT, LRR and PYD domai... 125 0.00032 1
UNIPROTKB|Q288C4 - symbol:NLRP9 "NACHT, LRR and PYD domai... 125 0.00032 1
UNIPROTKB|F1LSE8 - symbol:Ciita "Protein Ciita" species:1... 125 0.00035 1
UNIPROTKB|G3V9V5 - symbol:Ciita "Protein Ciita" species:1... 125 0.00035 1
TAIR|locus:2039027 - symbol:AT2G20210 "AT2G20210" species... 122 0.00036 1
RGD|619813 - symbol:Ciita "class II, major histocompatibi... 125 0.00038 1
UNIPROTKB|G3V6C0 - symbol:Ciita "Class II, major histocom... 125 0.00038 1
WARNING: Descriptions of 19 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2099207 [details] [associations]
symbol:RANGAP1 "AT3G63130" species:3702 "Arabidopsis
thaliana" [GO:0005098 "Ran GTPase activator activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000072 "M phase specific
microtubule process" evidence=TAS] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA;TAS] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009504 "cell plate" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0032153 "cell division
site" evidence=IDA] [GO:0000280 "nuclear division" evidence=RCA]
[GO:0000911 "cytokinesis by cell plate formation" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0006406 "mRNA export from nucleus" evidence=RCA]
[GO:0006913 "nucleocytoplasmic transport" evidence=RCA] [GO:0007000
"nucleolus organization" evidence=RCA] [GO:0009407 "toxin catabolic
process" evidence=RCA] [GO:0031048 "chromatin silencing by small
RNA" evidence=RCA] [GO:0048527 "lateral root development"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
GO:GO:0005886 GO:GO:0009507 GO:GO:0005635 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005819 GO:GO:0032153 GO:GO:0005096
GO:GO:0043547 GO:GO:0031965 GO:GO:0000910 GO:GO:0006606
GO:GO:0009524 GO:GO:0009504 EMBL:AL163816 UniGene:At.48804
UniGene:At.5159 GO:GO:0000072 InterPro:IPR025265 Pfam:PF13943
EMBL:AF214559 EMBL:AY034918 EMBL:AY150448 IPI:IPI00544809
PIR:T48102 RefSeq:NP_001190166.1 RefSeq:NP_191872.1 HSSP:P41391
ProteinModelPortal:Q9LE82 SMR:Q9LE82 DIP:DIP-46423N IntAct:Q9LE82
STRING:Q9LE82 PaxDb:Q9LE82 PRIDE:Q9LE82 EnsemblPlants:AT3G63130.1
EnsemblPlants:AT3G63130.2 GeneID:825488 KEGG:ath:AT3G63130
TAIR:At3g63130 eggNOG:COG5238 HOGENOM:HOG000241563
InParanoid:Q9LE82 KO:K14319 OMA:DFQPRTF PhylomeDB:Q9LE82
ProtClustDB:CLSN2684304 Genevestigator:Q9LE82 Uniprot:Q9LE82
Length = 535
Score = 1608 (571.1 bits), Expect = 3.0e-165, P = 3.0e-165
Identities = 327/541 (60%), Positives = 398/541 (73%)
Query: 1 MDSTTETLQHHALSVKLWPPSQSTRLMLVQRMTKNLTTPSIFSRKYGLLSXXXXXXXXXX 60
MD + +T Q+ LSVK+WPPS+STRLMLV+RMTKN+TTPSIFSRKYGLLS
Sbjct: 1 MDHSAKTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKR 60
Query: 61 XXXLAFAAANQHYEKEPDGDGSSSVQIYAKESSKLMLEVIKRGPRTKEDGEEMIAEKATA 120
LAFA AN+H++ EPDGDG+S+V +YAKESSKLML+VIKRGP+ E+ E +++
Sbjct: 61 IEDLAFATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKRGPQ--EESEVEVSKDG-- 116
Query: 121 ASQTVFDISGGQRGFIEEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLI 180
FDISGG R FIEEEEA+ LL PL +P NSYT+I FSN+SFG A++ AA +L I
Sbjct: 117 --DVFFDISGGSRAFIEEEEARDLLRPLADPRNSYTKIRFSNRSFGSEAAKFAASVLSSI 174
Query: 181 KDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLK 240
KDQLTEVDLSDF+AGRPE EALEV+NMFSSALEGS+LRYLNLS NALGEKG+RAF +L+
Sbjct: 175 KDQLTEVDLSDFVAGRPEAEALEVMNMFSSALEGSKLRYLNLSDNALGEKGIRAFASLIN 234
Query: 241 SQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA 300
SQ++LEEL+LMNDGISE+AA+A+ EL+PST+K++VL FHNNMTGDEGA AI+EIV+ P+
Sbjct: 235 SQHDLEELYLMNDGISEDAARAVRELLPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPS 294
Query: 301 LEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEV 360
LEDFRCSSTRIG+EGG+ALA+AL C+HLKKLDLRDNMFGVE G+AL++ L LTE+
Sbjct: 295 LEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEI 354
Query: 361 YLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLA 420
Y+SY APSLEVL+LAGNDIT Q L KLNL+
Sbjct: 355 YMSYLNLEDEGTEALSEALLKSAPSLEVLELAGNDITVKSTGNLAACIASKQSLAKLNLS 414
Query: 421 ENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNF 480
ENEL+DEG ILI K++E GH QL+E+DLSTN ++RAGAR LAQ V K K+LNINGNF
Sbjct: 415 ENELKDEGTILIAKAVE-GHDQLVEVDLSTNMIRRAGARALAQTVVKKNTFKLLNINGNF 473
Query: 481 IPDEGIDEVKEILKHSLDVLGPLDENXXXXXXXXXXXXXXXXXIRNDLDSKLKELHINKE 540
I +EGIDEV ++ K LD L PLD+N N+L+SKL L I +
Sbjct: 474 ISEEGIDEVNDMFKDCLDKLVPLDDNDPEGEDFEDEDEEEEGEDGNELESKLGSLKIKQG 533
Query: 541 E 541
E
Sbjct: 534 E 534
>TAIR|locus:2150285 [details] [associations]
symbol:RANGAP2 "AT5G19320" species:3702 "Arabidopsis
thaliana" [GO:0005098 "Ran GTPase activator activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
evidence=RCA;TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] GO:GO:0005783
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
GO:GO:0005635 GO:GO:0005819 GO:GO:0005096 GO:GO:0043547
GO:GO:0009651 GO:GO:0031965 GO:GO:0006913 EMBL:AF296837
GO:GO:0009524 InterPro:IPR025265 Pfam:PF13943 HOGENOM:HOG000241563
KO:K14319 ProtClustDB:CLSN2684304 EMBL:AF214560 IPI:IPI00541783
PIR:T52068 RefSeq:NP_197433.1 UniGene:At.11887
ProteinModelPortal:Q9M651 SMR:Q9M651 IntAct:Q9M651 STRING:Q9M651
PaxDb:Q9M651 PRIDE:Q9M651 EnsemblPlants:AT5G19320.1 GeneID:832052
KEGG:ath:AT5G19320 TAIR:At5g19320 eggNOG:NOG313064
InParanoid:Q9M651 OMA:NTIGIEA PhylomeDB:Q9M651
Genevestigator:Q9M651 Uniprot:Q9M651
Length = 545
Score = 1521 (540.5 bits), Expect = 4.9e-156, P = 4.9e-156
Identities = 306/536 (57%), Positives = 385/536 (71%)
Query: 11 HALSVKLWPPSQSTRLMLVQRMTKNLTTPSIFSRKYGLLSXXXXXXXXXXXXXLAFAAAN 70
HA S+KLWPPS TR L++R+T N ++ +IF+ KYG L+ +AF+ AN
Sbjct: 10 HAFSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTAN 69
Query: 71 QHYEKEPDGDGSSSVQIYAKESSKLMLEVIKRGPRTKEDGEEMIAEKATAASQTVFDISG 130
Q +E+EPDGDG S+VQ+YAKE SKL+LEV+K+GP K E+I+E + + +T FDIS
Sbjct: 70 QQFEREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSPRETFFDISK 129
Query: 131 GQRGFIEEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLS 190
G+R FIE EEA+ LL PL EPGN+YT+ICFSN+SFGLGA+RVA PIL +KDQL EVDLS
Sbjct: 130 GKRAFIEAEEAEELLKPLKEPGNAYTKICFSNRSFGLGAARVAEPILASLKDQLKEVDLS 189
Query: 191 DFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHL 250
DF+AGRPE EALEV+N+FS AL+GS L LNLS NALGEKGVRAFGALLKS ++LEEL+L
Sbjct: 190 DFVAGRPELEALEVMNIFSDALQGSILSSLNLSDNALGEKGVRAFGALLKSLSSLEELYL 249
Query: 251 MNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTR 310
MNDGIS+EAAQA+ ELIPSTE L+VLHFHNNMTGDEGA+AI+E+VK SP LE+FRCSSTR
Sbjct: 250 MNDGISKEAAQAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTR 309
Query: 311 IGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXX 370
+G++GGIAL++AL CTH++KLDLRDNMFG EAGV+LS+ L +F +TE+YLSY
Sbjct: 310 VGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDE 369
Query: 371 XXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAI 430
A +EVL++AGNDIT Q L KLNL+ENEL+DEG +
Sbjct: 370 GAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEGCV 429
Query: 431 LIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVK 490
I +EEGH +L ID+STN ++RAGAR LA V V K K+LNI+GN I +EGI+E+K
Sbjct: 430 QIANCIEEGHSKLQYIDMSTNYIRRAGARALAHVVVKKEAFKLLNIDGNIISEEGIEELK 489
Query: 491 EILKHSLDVLGPLDENXXXXXXXXXXXXXXXXXIRN-----DLDSKLKELHINKEE 541
EI K S ++LG LDEN +L+SKLK L +N+E+
Sbjct: 490 EIFKKSPELLGALDENDPDGEEDDDDEEDEEDEENEGNGNGELESKLKNLEVNQED 545
>TAIR|locus:2083028 [details] [associations]
symbol:AT3G06000 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AC013454 KO:K14319 IPI:IPI00516588
RefSeq:NP_187251.1 UniGene:At.53197 ProteinModelPortal:Q9SFG4
SMR:Q9SFG4 PRIDE:Q9SFG4 EnsemblPlants:AT3G06000.1 GeneID:819771
KEGG:ath:AT3G06000 TAIR:At3g06000 eggNOG:NOG255239
HOGENOM:HOG000153458 InParanoid:Q9SFG4 OMA:ETCTHIK PhylomeDB:Q9SFG4
ProtClustDB:CLSN2915399 Genevestigator:Q9SFG4 Uniprot:Q9SFG4
Length = 211
Score = 292 (107.8 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 65/166 (39%), Positives = 97/166 (58%)
Query: 341 VEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXX 400
++ GV++S+ +F LT + LSY APSL+V+++AGN+IT
Sbjct: 23 IKVGVSMSKPFSSFSFLTVINLSYTNLENGGAIALVNALKNSAPSLQVIEMAGNNITYEA 82
Query: 401 XXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARL 460
+ L KLNL+EN+L+DEG + I KS+E+ +L +D+S N ++R GA
Sbjct: 83 ATAIAVCLAAKRHLKKLNLSENDLKDEGCVEIVKSMEDW--ELEYVDMSYNDLRREGALR 140
Query: 461 LAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKHSLDVLGPLDEN 506
LA+V V K KMLNI+GN I +GI+E+K I + +LGPLD+N
Sbjct: 141 LARVVVKKGSFKMLNIDGNMISLKGIEEIKVIFTNCPKLLGPLDKN 186
Score = 112 (44.5 bits), Expect = 0.00058, P = 0.00058
Identities = 43/140 (30%), Positives = 66/140 (47%)
Query: 215 SQLRYLNLSHNALGEKGVRAF-GALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKL 273
S L +NLS+ L G A AL S +L+ + + + I+ EAA AI + + L
Sbjct: 37 SFLTVINLSYTNLENGGAIALVNALKNSAPSLQVIEMAGNNITYEAATAIAVCLAAKRHL 96
Query: 274 KVLHFHNNMTGDEGAVAISEIVKHSP--ALEDFRCSSTRIGAEGGIALAKALGQCTHLKK 331
K L+ N DEG V EIVK LE S + EG + LA+ + + K
Sbjct: 97 KKLNLSENDLKDEGCV---EIVKSMEDWELEYVDMSYNDLRREGALRLARVVVKKGSFKM 153
Query: 332 LDLRDNMFGVEAGVALSEVL 351
L++ NM ++ G+ +V+
Sbjct: 154 LNIDGNMISLK-GIEEIKVI 172
>UNIPROTKB|Q7RTR2 [details] [associations]
symbol:NLRC3 "Protein NLRC3" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007249 "I-kappaB kinase/NF-kappaB cascade"
evidence=IDA] [GO:0042110 "T cell activation" evidence=IEP]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] GO:GO:0005524 GO:GO:0005737 GO:GO:0042110
GO:GO:0032088 GO:GO:0007249 InterPro:IPR007111 PROSITE:PS50837
EMBL:BK001112 EMBL:AY601811 EMBL:AK090431 EMBL:AK074109
EMBL:AF501291 EMBL:AF501292 IPI:IPI00333975 IPI:IPI00385743
IPI:IPI00854580 IPI:IPI00854840 RefSeq:NP_849172.2
UniGene:Hs.592091 ProteinModelPortal:Q7RTR2 SMR:Q7RTR2
STRING:Q7RTR2 PhosphoSite:Q7RTR2 DMDM:158563940 PaxDb:Q7RTR2
PRIDE:Q7RTR2 Ensembl:ENST00000301749 GeneID:197358 KEGG:hsa:197358
UCSC:uc010btn.3 CTD:197358 GeneCards:GC16M003592 HGNC:HGNC:29889
neXtProt:NX_Q7RTR2 PharmGKB:PA162397626 eggNOG:NOG69209
HOGENOM:HOG000108875 HOVERGEN:HBG055285 InParanoid:Q7RTR2
GenomeRNAi:197358 NextBio:89661 ArrayExpress:Q7RTR2 Bgee:Q7RTR2
CleanEx:HS_NLRC3 Genevestigator:Q7RTR2 Uniprot:Q7RTR2
Length = 1065
Score = 265 (98.3 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 105/372 (28%), Positives = 163/372 (43%)
Query: 102 RGPRTKEDGEEMIAEKATAASQTVFDISGGQRGFIEEEEAKLLLGPLTEPGNSYTRICFS 161
RG G + +A+ A ++T+ +S Q + ++ A+ + L + + +
Sbjct: 702 RGNSIGPQGAKALAD-ALKINRTLTSLSL-QGNTVRDDGARSMAEALAS-NRTLSMLHLQ 758
Query: 162 NKSFG-LGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQ-LRY 219
S G +GA R+A + + L E+ S G +AL + AL+ +Q L
Sbjct: 759 KNSIGPMGAQRMADALKQ--NRSLKELMFSSNSIGDGGAKAL------AEALKVNQGLES 810
Query: 220 LNLSHNALGEKGVRAF-GALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHF 278
L+L N++ + GV A GAL +Q L L L + IS E AQAI + + LK L
Sbjct: 811 LDLQSNSISDAGVAALMGALCTNQTLLS-LSLRENSISPEGAQAIAHALCANSTLKNLDL 869
Query: 279 HNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNM 338
N+ D+GA AI+ V+ + L I A AL +AL L LDL++N
Sbjct: 870 TANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENA 929
Query: 339 FGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITX 398
G + A++ L LT +YL +LE+LDL GN I
Sbjct: 930 IGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNR-TLEILDLRGNAIGV 988
Query: 399 XXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGA 458
L +LNL EN L +GAI I +L H +L I+L N + +GA
Sbjct: 989 AGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNH-RLQHINLQGNHIGDSGA 1047
Query: 459 RLLAQ-VAVNKP 469
R++++ + N P
Sbjct: 1048 RMISEAIKTNAP 1059
Score = 226 (84.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 81/295 (27%), Positives = 130/295 (44%)
Query: 210 SALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPS 269
S L L L+L N++G +G +A LK L L L + + ++ A+++ E + S
Sbjct: 689 SLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALAS 748
Query: 270 TEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHL 329
L +LH N G GA +++ +K + +L++ SS IG G ALA+AL L
Sbjct: 749 NRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGL 808
Query: 330 KKLDLRDNMFGVEAGVALSEVLPAF-PDLTEVYLSYXXXXXXXXXXXXXXXXXCAPS-LE 387
+ LDL+ N +AGVA ++ A + T + LS CA S L+
Sbjct: 809 ESLDLQSNSIS-DAGVAA--LMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLK 865
Query: 388 VLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEID 447
LDL N + + LT L+L N +Q A +G++L+ L +D
Sbjct: 866 NLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRS-LTSLD 924
Query: 448 LSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEIL--KHSLDVL 500
L N++ GA +A+ L L + I G + E L +L++L
Sbjct: 925 LQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEIL 979
Score = 206 (77.6 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 74/294 (25%), Positives = 111/294 (37%)
Query: 204 VINMFSSALEGSQLRY--LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQ 261
V+ + S L G R ++L+ N + KG +A L +L L L + I + A+
Sbjct: 653 VMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAK 712
Query: 262 AILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAK 321
A+ + + L L N D+GA +++E + + L IG G +A
Sbjct: 713 ALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMAD 772
Query: 322 ALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXX 381
AL Q LK+L N G AL+E L L + L
Sbjct: 773 ALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQ--SNSISDAGVAALMGAL 830
Query: 382 CA-PSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGH 440
C +L L L N I+ L L+L N L D+GA I ++ E
Sbjct: 831 CTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENR 890
Query: 441 GQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILK 494
L + L N ++ A+ L Q L L++ N I D+G V LK
Sbjct: 891 -TLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALK 943
Score = 196 (74.1 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 87/352 (24%), Positives = 140/352 (39%)
Query: 136 IEEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAG 195
I + AK L L S T + S G ++ A L+ I LT + L G
Sbjct: 678 ISNKGAKALARSLLV-NRSLTSLDLRGNSIGPQGAKALADALK-INRTLTSLSLQ----G 731
Query: 196 RPEEEALEVINMFSSALEGSQ-LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDG 254
+ + + AL ++ L L+L N++G G + LK +L+EL ++
Sbjct: 732 NTVRD--DGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNS 789
Query: 255 ISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAE 314
I + A+A+ E + + L+ L +N D G A+ + + L I E
Sbjct: 790 IGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPE 849
Query: 315 GGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXX 374
G A+A AL + LK LDL N+ + A++ + LT ++L +
Sbjct: 850 GAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQA 909
Query: 375 XXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGK 434
SL LDL N I LT L L + GA ++G+
Sbjct: 910 LGQALQLNR-SLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGE 968
Query: 435 SLEEGHGQLIEI-DLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEG 485
+L + +EI DL N++ AGA+ LA L+ LN+ N + +G
Sbjct: 969 ALAVN--RTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDG 1018
Score = 185 (70.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 68/288 (23%), Positives = 115/288 (39%)
Query: 207 MFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILEL 266
M + + L+ L S N++G+ G +A LK LE L L ++ IS+ A++
Sbjct: 770 MADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 829
Query: 267 IPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQC 326
+ + + L L N EGA AI+ + + L++ ++ + +G A+A A+ +
Sbjct: 830 LCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVREN 889
Query: 327 THLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSL 386
L L L+ N A AL + L LT + L +L
Sbjct: 890 RTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQ-ENAIGDDGACAVARALKVNTAL 948
Query: 387 EVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEI 446
L L I + L L+L N + GA + +L+ + L +
Sbjct: 949 TALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKV-NSSLRRL 1007
Query: 447 DLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILK 494
+L NS+ GA +A L+ +N+ GN I D G + E +K
Sbjct: 1008 NLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIK 1055
Score = 135 (52.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 60/280 (21%), Positives = 110/280 (39%)
Query: 72 HYEKEPDGDGSSSVQIYAKESSKLMLEVIKRGPRTKEDGEEMIAEKATAASQTVFDISGG 131
H +K G + A + ++ + E++ + G + +AE A +Q + +
Sbjct: 756 HLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAE-ALKVNQGLESLDL- 813
Query: 132 QRGFIEEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSD 191
Q I + L+G L + N GA +A + L +DL+
Sbjct: 814 QSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCA--NSTLKNLDLT- 870
Query: 192 FIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLM 251
A ++ I + + E L L+L N + +A G L+ +L L L
Sbjct: 871 --ANLLHDQGARAIAV--AVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQ 926
Query: 252 NDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRI 311
+ I ++ A A+ + L L+ G GA + E + + LE I
Sbjct: 927 ENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAI 986
Query: 312 GAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVL 351
G G ALA AL + L++L+L++N G++ + ++ L
Sbjct: 987 GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATAL 1026
>MGI|MGI:2444070 [details] [associations]
symbol:Nlrc3 "NLR family, CARD domain containing 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0007249 "I-kappaB kinase/NF-kappaB cascade"
evidence=ISO;ISS] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=ISO;ISS] [GO:0042110 "T
cell activation" evidence=ISS] MGI:MGI:2444070 GO:GO:0005524
GO:GO:0005737 GO:GO:0042110 GO:GO:0032088 GO:GO:0007249
InterPro:IPR007111 PROSITE:PS50837 eggNOG:NOG69209
HOGENOM:HOG000108875 HOVERGEN:HBG055285 EMBL:AK220314 EMBL:AK079766
EMBL:AK084199 EMBL:AK171971 EMBL:BC130223 IPI:IPI00652368
IPI:IPI00671345 IPI:IPI00677124 IPI:IPI00678735 IPI:IPI00828619
UniGene:Mm.215994 ProteinModelPortal:Q5DU56 SMR:Q5DU56
PhosphoSite:Q5DU56 PRIDE:Q5DU56 Ensembl:ENSMUST00000180200
UCSC:uc007xzc.1 UCSC:uc007xzd.1 UCSC:uc007xze.1
GeneTree:ENSGT00690000101889 OrthoDB:EOG4BZN26 CleanEx:MM_NLRC3
Genevestigator:Q5DU56 Uniprot:Q5DU56
Length = 1064
Score = 255 (94.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 78/263 (29%), Positives = 116/263 (44%)
Query: 209 SSALEGSQ-LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELI 267
+ AL+ +Q L L+L N++ + GV L S L L+L + IS E AQA+ + +
Sbjct: 798 AEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQAL 857
Query: 268 PSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCT 327
LK L N+ D GA AI+ V + +L I A AL +AL
Sbjct: 858 CRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNR 917
Query: 328 HLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLE 387
L LDL++N G E +++ L L +YL +LE
Sbjct: 918 TLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNR-TLE 976
Query: 388 VLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEID 447
+LDL GND+ L +LNL EN L +GAI + +L E HG L I+
Sbjct: 977 ILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHG-LHHIN 1035
Query: 448 LSTNSMKRAGARLLAQ-VAVNKP 469
L N + + AR++++ + N P
Sbjct: 1036 LQGNPIGESAARMISEAIKTNAP 1058
Score = 229 (85.7 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 97/354 (27%), Positives = 149/354 (42%)
Query: 157 RICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQ 216
+I + G ++ A L L+ L +DL G P +AL + AL+ ++
Sbjct: 669 KISLAENQIGNKGAKALARSL-LVNRSLITLDLRSNSIGPPGAKAL------ADALKINR 721
Query: 217 -LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKV 275
L L+L N + + GV L S + L L + I AQ + + + LK
Sbjct: 722 TLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKA 781
Query: 276 LHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLR 335
L F +N GD GA+A++E +K + LE+ S I G L +AL L L+LR
Sbjct: 782 LMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLR 841
Query: 336 DNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGND 395
+N E AL++ L L + L+ SL L L N
Sbjct: 842 ENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGE-NHSLTHLHLQWNF 900
Query: 396 ITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKR 455
I + LT L+L EN + DEGA + +L+ + LI + L S+
Sbjct: 901 IQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKV-NTTLIALYLQVASIGS 959
Query: 456 AGARLLAQ-VAVNKPGLKMLNINGNFIPDEGIDEVKEILK--HSLDVLGPLDEN 506
GA+ L + + VN+ L++L++ GN + G + LK SL L L EN
Sbjct: 960 QGAQALGEALTVNRT-LEILDLRGNDVGAAGAKALANALKLNSSLRRLN-LQEN 1011
Score = 226 (84.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 76/294 (25%), Positives = 118/294 (40%)
Query: 204 VINMFSSALEGS--QLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQ 261
V+ + S L G ++R ++L+ N +G KG +A L +L L L ++ I A+
Sbjct: 652 VMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAK 711
Query: 262 AILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAK 321
A+ + + L L +N+ D+G + ++E + + + + IG G +A
Sbjct: 712 ALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMAD 771
Query: 322 ALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXX 381
AL Q LK L N G +AL+E L L + L
Sbjct: 772 ALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQ--SNSISDMGVTVLMRAL 829
Query: 382 CA-PSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGH 440
C+ +L L+L N I+ L L+L N L D GA I ++ E H
Sbjct: 830 CSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENH 889
Query: 441 GQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILK 494
L + L N ++ AR L Q L L++ N I DEG V LK
Sbjct: 890 S-LTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALK 942
Score = 181 (68.8 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 67/288 (23%), Positives = 114/288 (39%)
Query: 207 MFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILEL 266
M + + L+ L S N +G++G A LK LE L L ++ IS+ ++
Sbjct: 769 MADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRA 828
Query: 267 IPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQC 326
+ S + L L+ N EGA A+++ + + L+ ++ + G A+A A+G+
Sbjct: 829 LCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGEN 888
Query: 327 THLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSL 386
L L L+ N A AL + L LT + L +L
Sbjct: 889 HSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQ-ENAIGDEGASSVAGALKVNTTL 947
Query: 387 EVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEI 446
L L I + L L+L N++ GA + +L+ + L +
Sbjct: 948 IALYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKL-NSSLRRL 1006
Query: 447 DLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILK 494
+L NS+ GA +A GL +N+ GN I + + E +K
Sbjct: 1007 NLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISEAIK 1054
>TAIR|locus:2194604 [details] [associations]
symbol:emb2004 "embryo defective 2004" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009941 eggNOG:NOG69209 EMBL:AY056236
EMBL:AY091215 IPI:IPI00540032 RefSeq:NP_563871.1 UniGene:At.26354
ProteinModelPortal:Q93ZV8 SMR:Q93ZV8 IntAct:Q93ZV8 PaxDb:Q93ZV8
PRIDE:Q93ZV8 EnsemblPlants:AT1G10510.1 GeneID:837591
KEGG:ath:AT1G10510 TAIR:At1g10510 HOGENOM:HOG000264659
InParanoid:Q93ZV8 OMA:NNMIDYS PhylomeDB:Q93ZV8
ProtClustDB:CLSN2687758 ArrayExpress:Q93ZV8 Genevestigator:Q93ZV8
Uniprot:Q93ZV8
Length = 605
Score = 244 (91.0 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 72/275 (26%), Positives = 121/275 (44%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
++ S N + GV+AF +L+S L+ L+L + I +E A+ + + +++L +
Sbjct: 203 VSFSANGITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLN 262
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
+ GDEGA I+E++K + L ++ I G +LA AL + ++ L L N
Sbjct: 263 STDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLENNTIRNLHLNGNYG 322
Query: 340 GVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXX 399
G AL++ L L E++L + +LDL N I+
Sbjct: 323 GALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAK 382
Query: 400 XXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGAR 459
+ L LNL N++ DEGA I SL++ + IDL N++ G
Sbjct: 383 GAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNRS-IATIDLGGNNIHAEGVN 441
Query: 460 LLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILK 494
+AQ + + L + N I +G + EILK
Sbjct: 442 AIAQALKDNAIITTLEVGYNPIGPDGAKALSEILK 476
Score = 224 (83.9 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 93/380 (24%), Positives = 163/380 (42%)
Query: 125 VFDISGGQRGFIEEEEAKLLLGPLTEPGNSYTRICFSNKS-FG-LGASRVAAPILRLIKD 182
+ ++SG G +E AK L L E NS I N + G GA +A + R
Sbjct: 230 ILNLSGNPIG---DEGAKTLCATLME--NSSIEILQLNSTDIGDEGAKEIAELLKR--NS 282
Query: 183 QLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQ 242
L ++L++ + + ++ + LE + +R L+L+ N G G A L+
Sbjct: 283 TLRIIELNNNMI-----DYSGFTSLAGALLENNTIRNLHLNGNYGGALGANALAKGLEGN 337
Query: 243 NNLEELHLMNDGISEEAAQAILELIPSTE-KLKVLHFHNNMTGDEGAVAISEIVKHSPAL 301
+L ELHL + I +E +A++ + S + K+ +L NN +GA ++E +K S +L
Sbjct: 338 KSLRELHLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAKGAFYVAEYIKRSKSL 397
Query: 302 EDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVY 361
IG EG +A +L Q + +DL N E A+++ L +T +
Sbjct: 398 VWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLGGNNIHAEGVNAIAQALKDNAIITTLE 457
Query: 362 LSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAE 421
+ Y +++ L L I ++ L+L
Sbjct: 458 VGYNPIGPDGAKALSEILKFHG-NVKTLKLGWCQIAAKGAEHVADMLRYNNTISVLDLRA 516
Query: 422 NELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQ-VAVNKP-GLKMLNINGN 479
N L+DEGA + +SL+ + L +DL N ++ GA +AQ + N+ + +N+ N
Sbjct: 517 NGLRDEGASCLARSLKVVNEALTSVDLGFNEIRDDGAFAIAQALKANEDVTVTSINLGNN 576
Query: 480 FIPDEGIDEVKEILKHSLDV 499
FI G + + H L++
Sbjct: 577 FITKFGQSALTDARDHVLEM 596
Score = 209 (78.6 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 68/301 (22%), Positives = 131/301 (43%)
Query: 205 INMFSSALEGS-QLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAI 263
+ F L+ + L+ LNLS N +G++G + A L +++E L L + I +E A+ I
Sbjct: 215 VKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDEGAKEI 274
Query: 264 LELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKAL 323
EL+ L+++ +NNM G +++ + + + + + GA G ALAK L
Sbjct: 275 AELLKRNSTLRIIELNNNMIDYSGFTSLAGALLENNTIRNLHLNGNYGGALGANALAKGL 334
Query: 324 GQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCA 383
L++L L N G E AL L + + +
Sbjct: 335 EGNKSLRELHLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAKGAFYVAEYIKRS 394
Query: 384 PSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQL 443
SL L+L NDI + + ++L N + EG I ++L++ + +
Sbjct: 395 KSLVWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLGGNNIHAEGVNAIAQALKD-NAII 453
Query: 444 IEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKHSLDVLGPL 503
+++ N + GA+ L+++ +K L + I +G + V ++L+++ + + L
Sbjct: 454 TTLEVGYNPIGPDGAKALSEILKFHGNVKTLKLGWCQIAAKGAEHVADMLRYN-NTISVL 512
Query: 504 D 504
D
Sbjct: 513 D 513
Score = 202 (76.2 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 67/302 (22%), Positives = 130/302 (43%)
Query: 194 AGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMND 253
A + + EA + +N F+ L R +++S G++G+ L +EE+ +
Sbjct: 151 AAKVDREAKQRLNEFAKELRS--FRSVDMSGCNFGDEGLFFLAESLGYNQTVEEVSFSAN 208
Query: 254 GISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGA 313
GI+ +A ++ S LK+L+ N GDEGA + + + ++E + +ST IG
Sbjct: 209 GITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGD 268
Query: 314 EGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXX 373
EG +A+ L + + L+ ++L +NM +L+ L + ++L+
Sbjct: 269 EGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLENNTIRNLHLNGNYGGALGAN 328
Query: 374 XXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQF-LTKLNLAENELQDEGAILI 432
SL L L GN I + + L+L N + +GA +
Sbjct: 329 ALAKGLEG-NKSLRELHLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAKGAFYV 387
Query: 433 GKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEI 492
+ ++ L+ ++L N + GA +A + +++ GN I EG++ + +
Sbjct: 388 AEYIKRSKS-LVWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLGGNNIHAEGVNAIAQA 446
Query: 493 LK 494
LK
Sbjct: 447 LK 448
Score = 180 (68.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 68/316 (21%), Positives = 129/316 (40%)
Query: 193 IAGRP-EEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLM 251
++G P +E + + ++ +E S + L L+ +G++G + LLK + L + L
Sbjct: 233 LSGNPIGDEGAKTL--CATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIELN 290
Query: 252 NDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRI 311
N+ I ++ + ++ LH + N G GA A+++ ++ + +L + I
Sbjct: 291 NNMIDYSGFTSLAGALLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSI 350
Query: 312 GAEGGIALAKALGQCTHLKK---LDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXX 368
G EG AL L +H K LDL +N + ++E + L + L Y
Sbjct: 351 GDEGTRALMAGLS--SHKGKVALLDLGNNSISAKGAFYVAEYIKRSKSLVWLNL-YMNDI 407
Query: 369 XXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEG 428
S+ +DL GN+I +T L + N + +G
Sbjct: 408 GDEGAEKIADSLKQNRSIATIDLGGNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDG 467
Query: 429 AILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDE 488
A + + L+ HG + + L + GA +A + + +L++ N + DEG
Sbjct: 468 AKALSEILKF-HGNVKTLKLGWCQIAAKGAEHVADMLRYNNTISVLDLRANGLRDEGASC 526
Query: 489 VKEILKHSLDVLGPLD 504
+ LK + L +D
Sbjct: 527 LARSLKVVNEALTSVD 542
>MGI|MGI:3612191 [details] [associations]
symbol:Nlrc5 "NLR family, CARD domain containing 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006952 "defense response" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=ISO;IDA] [GO:0043549 "regulation of kinase
activity" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO;IMP] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0060335 "positive regulation of
interferon-gamma-mediated signaling pathway" evidence=ISO]
[GO:0060339 "negative regulation of type I interferon-mediated
signaling pathway" evidence=ISO;IDA] [GO:0060340 "positive
regulation of type I interferon-mediated signaling pathway"
evidence=ISO] InterPro:IPR000767 PRINTS:PR00364 PROSITE:PS51450
MGI:MGI:3612191 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0045087 GO:GO:0051607 GO:GO:0032088 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0060339 GO:GO:0060340 GO:GO:0060335
eggNOG:NOG265451 CTD:84166 HOVERGEN:HBG108194 OrthoDB:EOG4Z0B4Q
EMBL:FJ889356 EMBL:AK220210 IPI:IPI00462310 IPI:IPI00944192
RefSeq:NP_001028379.2 UniGene:Mm.334720 ProteinModelPortal:C3VPR6
SMR:C3VPR6 IntAct:C3VPR6 STRING:C3VPR6 GeneID:434341
KEGG:mmu:434341 UCSC:uc009mwj.2 UCSC:uc012gio.1
HOGENOM:HOG000168392 InParanoid:Q571H9 NextBio:409534
Genevestigator:C3VPR6 Uniprot:C3VPR6
Length = 1915
Score = 229 (85.7 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 93/352 (26%), Positives = 151/352 (42%)
Query: 136 IEEEEAKLLLGPLTEPGNSYTRICFSNKSF-GLGASRVAAPILRLIK-DQLTEVDLSDFI 193
+ EE+ +LL+G L G R+ + SF LGAS +A I L + L ++ LS
Sbjct: 1532 LREEDTELLMGALQ--GTC--RLKKLHLSFLPLGASSLALLIQGLSRMTLLQDLCLSHNQ 1587
Query: 194 AGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMND 253
G + L I + +LR +LSHN +G+ G + A+L L + +L ++
Sbjct: 1588 IGDVGTQCLAAI-----LPKLPELRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSHN 1642
Query: 254 GISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGA 313
I Q + ++P +L+ N GD G ++ I+ P L F S RIG
Sbjct: 1643 QIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGP 1702
Query: 314 EGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXX 373
GG+ L K+L HL+++ L +N G + L++ LP P L + L
Sbjct: 1703 AGGVQLVKSLTHFEHLEEIKLGNNALGEPTALELAQRLP--PQLRVLCLPSSHLGPEGAL 1760
Query: 374 XXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIG 433
C P +E + LA N++ L +++L +++D+ A +
Sbjct: 1761 GLAQALEQC-PHIEEVSLAENNLAGGVPRFSKRL----PLLRQIDLEFCKIEDQAARHLA 1815
Query: 434 KSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEG 485
+L L ++ LS N + A LAQV LK +N+ N I G
Sbjct: 1816 ANLTL-FPALEKLLLSGNLLGDEVAAELAQVLPQMGQLKKVNLEWNRITARG 1866
Score = 219 (82.2 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 74/277 (26%), Positives = 114/277 (41%)
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVL 276
L+ L LSHN +G+ G + A+L L + L ++ I + Q + ++P +L+
Sbjct: 1578 LQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAAILPKLPELRKF 1637
Query: 277 HFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRD 336
+ +N G G ++ I+ P L F S +IG G LA L + L+K DL
Sbjct: 1638 NLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSG 1697
Query: 337 NMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDI 396
N G GV L + L F L E+ L P L VL L + +
Sbjct: 1698 NRIGPAGGVQLVKSLTHFEHLEEIKLG---NNALGEPTALELAQRLPPQLRVLCLPSSHL 1754
Query: 397 TXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRA 456
+ +++LAEN L G K L L +IDL ++
Sbjct: 1755 GPEGALGLAQALEQCPHIEEVSLAENNLAG-GVPRFSKRLP----LLRQIDLEFCKIEDQ 1809
Query: 457 GARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEIL 493
AR LA P L+ L ++GN + DE E+ ++L
Sbjct: 1810 AARHLAANLTLFPALEKLLLSGNLLGDEVAAELAQVL 1846
Score = 208 (78.3 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 81/323 (25%), Positives = 133/323 (41%)
Query: 158 ICFSNKSFG-LGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQ 216
+C S+ G +G +AA + +L +L + DLS G + L I + +
Sbjct: 1581 LCLSHNQIGDVGTQCLAAILPKL--PELRKFDLSHNQIGDVGTQCLAAI-----LPKLPE 1633
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVL 276
LR NLSHN +G G + A+L L + L + I + Q + ++P +L+
Sbjct: 1634 LRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAILPKLPELRKF 1693
Query: 277 HFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRD 336
N G G V + + + H LE+ + + +G + LA+ L L+ L L
Sbjct: 1694 DLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNALGEPTALELAQRLPP--QLRVLCLPS 1751
Query: 337 NMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDI 396
+ G E + L++ L P + EV L+ P L +DL I
Sbjct: 1752 SHLGPEGALGLAQALEQCPHIEEVSLAENNLAGGVPRFSKRL-----PLLRQIDLEFCKI 1806
Query: 397 TXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRA 456
L KL L+ N L DE A + + L + GQL +++L N +
Sbjct: 1807 EDQAARHLAANLTLFPALEKLLLSGNLLGDEVAAELAQVLPQ-MGQLKKVNLEWNRITAR 1865
Query: 457 GARLLAQVAVNKPGLKMLNINGN 479
GA+LLAQ V + ++ + N
Sbjct: 1866 GAQLLAQGLVQGSCVPVIRLWNN 1888
Score = 185 (70.2 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 79/308 (25%), Positives = 125/308 (40%)
Query: 178 RLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGA 237
RL + L++V +D + L+ I + S L+ +L + +S +L AFG
Sbjct: 1462 RLQQLSLSQVSFND--NDGTSSKLLQNILLSSCELKSFRLTFSQVSTKSLTHL---AFG- 1515
Query: 238 LLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKH 297
L ++LEEL N+ + EE + ++ + T +LK LH G + + +
Sbjct: 1516 -LGHCHHLEELDFSNNSLREEDTELLMGALQGTCRLKKLHLSFLPLGASSLALLIQGLSR 1574
Query: 298 SPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDL 357
L+D S +IG G LA L + L+K DL N G L+ +LP P+L
Sbjct: 1575 MTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAAILPKLPEL 1634
Query: 358 TEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKL 417
+ LS+ P L DL+ N I L K
Sbjct: 1635 RKFNLSHNQIGHVGTQCLAAILPKL-PELRKFDLSRNQIGDVGTQCLAAILPKLPELRKF 1693
Query: 418 NLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNIN 477
+L+ N + G + + KSL L EI L N++ A LAQ P L++L +
Sbjct: 1694 DLSGNRIGPAGGVQLVKSLTHFE-HLEEIKLGNNALGEPTALELAQRL--PPQLRVLCLP 1750
Query: 478 GNFIPDEG 485
+ + EG
Sbjct: 1751 SSHLGPEG 1758
Score = 146 (56.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 79/339 (23%), Positives = 144/339 (42%)
Query: 170 SRVAAPI--LR-LIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNA 226
SR AA I LR L +LT + + E + LE+ + +L S+L + N
Sbjct: 593 SRQAAVIQVLRKLASRKLTGPKMIELYHCVAETQDLELARFTAQSLP-SRLSFHNFP--- 648
Query: 227 LGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDE 286
L + A +L+ ++ + +HL DG E E + +++ L F + GD
Sbjct: 649 LTHADLAALANILEHRD--DPIHLDFDGCPLEPHCP--EALVGCGQVENLSFKSRKCGDA 704
Query: 287 GAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVA 346
A A+ + +L+ + +RI A+G L + L C+ L+++ L DN ++
Sbjct: 705 FAEALCRSLPTMGSLKTLGLTGSRITAQGISHLIQTLPLCSQLEEVSLHDNQLKDPEVLS 764
Query: 347 LSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXX 406
L E+LP+ P L ++ LS C P++ L + D+
Sbjct: 765 LVELLPSLPKLQKLDLSRNSFSRSILLSLVKVAITC-PTVRKLQVRELDLIF-------- 815
Query: 407 XXXXXQFLTKLNLAENELQDEGAILIGK-SLEEGHGQLIEIDLSTNSMKRAGARLLAQVA 465
+L+ + + Q + + GK SL+EG + +++ L ++ A L ++
Sbjct: 816 ------YLSPVTETATQ-QSGASDVQGKDSLKEGQSRSLQLRLQKCQLRIRDAEALVELF 868
Query: 466 VNKPGLKMLNINGNFIPDEGIDEVKEILKHSLDVLGPLD 504
P L+ +N++GN + D+G V E L + LD
Sbjct: 869 QKSPQLEEVNLSGNHLEDDGCRLVAEAASQ-LHIAQKLD 906
Score = 135 (52.6 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 55/249 (22%), Positives = 103/249 (41%)
Query: 248 LHLMNDGISEEAAQAILELIPSTEKLKVLHFHN-NMTGDEGAVA--ISEIVKHSPALEDF 304
L L + + E + +++L+ + +L+ L + ++G + + I+ S L+ F
Sbjct: 1438 LRLAHCDLETEHSHLMIQLVETYARLQQLSLSQVSFNDNDGTSSKLLQNILLSSCELKSF 1497
Query: 305 RCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSY 364
R + +++ + LA LG C HL++LD +N E L L L +++LS+
Sbjct: 1498 RLTFSQVSTKSLTHLAFGLGHCHHLEELDFSNNSLREEDTELLMGALQGTCRLKKLHLSF 1557
Query: 365 XXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENEL 424
L+ L L+ N I L K +L+ N++
Sbjct: 1558 LPLGASSLALLIQGLSRMT-LLQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQI 1616
Query: 425 QDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDE 484
D G + L + +L + +LS N + G + LA + P L+ +++ N I D
Sbjct: 1617 GDVGTQCLAAILPK-LPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDV 1675
Query: 485 GIDEVKEIL 493
G + IL
Sbjct: 1676 GTQCLAAIL 1684
Score = 128 (50.1 bits), Expect = 0.00032, P = 0.00032
Identities = 73/289 (25%), Positives = 112/289 (38%)
Query: 213 EG-SQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLM------NDGISEEAAQAILE 265
EG S L L+H L + L+++ L++L L NDG S + Q IL
Sbjct: 1430 EGNSDSMALRLAHCDLETEHSHLMIQLVETYARLQQLSLSQVSFNDNDGTSSKLLQNIL- 1488
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKAL-G 324
+ S E LK + + ++ + H LE+ S+ + E L AL G
Sbjct: 1489 -LSSCE-LKSFRLTFSQVSTKSLTHLAFGLGHCHHLEELDFSNNSLREEDTELLMGALQG 1546
Query: 325 QCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAP 384
C LKKL L G + L + L L ++ LS+ P
Sbjct: 1547 TC-RLKKLHLSFLPLGASSLALLIQGLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKL-P 1604
Query: 385 SLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLI 444
L DL+ N I L K NL+ N++ G + L + +L
Sbjct: 1605 ELRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPK-LPELR 1663
Query: 445 EIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFI-PDEGIDEVKEI 492
+ DLS N + G + LA + P L+ +++GN I P G+ VK +
Sbjct: 1664 KFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVKSL 1712
Score = 89 (36.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 50/220 (22%), Positives = 95/220 (43%)
Query: 80 DGSSSVQIYAKESSKLMLEVIKRGPRTKEDGEEMIAEKAT----AASQTVFDISGGQRGF 135
D + V+++ K S + EV G ++DG ++AE A+ A + D Q G
Sbjct: 860 DAEALVELFQK--SPQLEEVNLSGNHLEDDGCRLVAEAASQLHIAQKLDLSDNGLSQTGV 917
Query: 136 IEEEEAKLLLGPLTEPG----NSYTRICFSNKSFGL-GASRVAAPILRLIKDQLTEVDL- 189
+A G L + N+ + F+ + G+ + AP++ + +E+
Sbjct: 918 TYVLKAMSTCGTLEDLHISLLNNTVVLTFAQEPREQEGSCKGRAPLISFVSPVTSELSQR 977
Query: 190 SDFI----AGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNL 245
S I G + + ++ + L +L+LS N+LG KGV LL L
Sbjct: 978 SRRIRLTHCGFLAKHTETLCEALRASCQTHNLDHLDLSDNSLGGKGVILLTELLPGLGPL 1037
Query: 246 EELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGD 285
+ L+L +G+S +A ++++ + S + V H ++ D
Sbjct: 1038 KSLNLSRNGLSMDAVFSLVQCLSSLQW--VFHLDVSLESD 1075
Score = 61 (26.5 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPS 269
L L+L+ N LG+ G+R L L L ++ IS+E +LE +PS
Sbjct: 1243 LSQLDLTDNLLGDIGLRCLLECLPQLPISGWLDLSHNNISQEGILYLLETLPS 1295
Score = 51 (23.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 219 YLNLSHNALGEKGVRAFGALLKSQNNLEEL 248
+L+LSHN + ++G+ L S N++E+
Sbjct: 1273 WLDLSHNNISQEGILYLLETLPSYPNIQEV 1302
>ASPGD|ASPL0000071633 [details] [associations]
symbol:ranGAP species:162425 "Emericella nidulans"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0046827 "positive
regulation of protein export from nucleus" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0051383
"kinetochore organization" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR027038 EMBL:BN001303 EMBL:AACD01000084 eggNOG:COG5238
KO:K14319 PANTHER:PTHR24113 HOGENOM:HOG000195026 OMA:NTIGIEA
OrthoDB:EOG40S3QS RefSeq:XP_662466.1 ProteinModelPortal:Q5B3L8
SMR:Q5B3L8 STRING:Q5B3L8 EnsemblFungi:CADANIAT00005543
GeneID:2872661 KEGG:ani:AN4862.2 Uniprot:Q5B3L8
Length = 417
Score = 152 (58.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 67/257 (26%), Positives = 107/257 (41%)
Query: 121 ASQTVFDISGGQRGFIEEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLI 180
A +F + G + + + PL E YT + + G+ AS A +L
Sbjct: 2 APPKIFSLEGKGLKLDSAADIEAHIQPLLE-STDYTEVRLGGNTLGVPASERLAAVLSTQ 60
Query: 181 KDQLTEVDLSDFIAGRPEEEALEVINMFSSAL-EGSQLRYLNLSHNALGEKGVRAFGALL 239
K L +L+D R E + + +AL E L +NLS NA G + L
Sbjct: 61 KS-LEVAELADIFTSRLLSEIPDALTFLLNALLEIPTLHTINLSDNAFGANTQKPLVDFL 119
Query: 240 KSQNNLEELHLMNDGISEEA----AQAILELIPSTEKLK-----VLHFHNNMTG----DE 286
L L L N+G+ EA A+A+ EL E+ + V + + G +
Sbjct: 120 SRHIPLRHLVLNNNGMGPEAGSNIAKALTELAQRKEEARSGGKEVPLLESIVCGRNRLEN 179
Query: 287 GAVAI-SEIVK-HSPALEDFRCSSTRIGAEGGIALAK-ALGQCTHLKKLDLRDNMFGVEA 343
G++A + K H+ + + + I EG L K L + L+ LDL+DN F +
Sbjct: 180 GSMAAWAHAYKAHAAGIRSVKMTQNGIRQEGISHLLKEGLSHASALEVLDLQDNTFTITG 239
Query: 344 GVALSEVLPAFPDLTEV 360
AL+ V+ +P L E+
Sbjct: 240 STALAGVVSGWPSLREL 256
Score = 108 (43.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 33/127 (25%), Positives = 55/127 (43%)
Query: 383 APSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQ 442
A +LEVLDL N T L +L + + L G I + ++L + Q
Sbjct: 222 ASALEVLDLQDNTFTITGSTALAGVVSGWPSLRELGVGDCLLSARGGIKLAQALAKAKNQ 281
Query: 443 LIEI-DLSTNSMKRAGARLLAQVAVNK-PGLKMLNINGNFIPDEGID--EVKEILKHSLD 498
+EI L N + G + A P L+ + +NGN +E ++ E+ E+L+ +
Sbjct: 282 KVEILRLQYNDISAEGVKQFLHAAKTALPALRRIELNGNKFQEEDVNVTELSELLESRKE 341
Query: 499 VLGPLDE 505
G D+
Sbjct: 342 AHGKDDD 348
>UNIPROTKB|P46060 [details] [associations]
symbol:RANGAP1 "Ran GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0000777 "condensed chromosome kinetochore"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005643 "nuclear pore" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0046826 "negative regulation of protein
export from nucleus" evidence=IDA] [GO:0032853 "positive regulation
of Ran GTPase activity" evidence=TAS] InterPro:IPR009109
InterPro:IPR027038 Pfam:PF07834 GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_115566
GO:GO:0007165 Reactome:REACT_21300 GO:GO:0031965 GO:GO:0005643
GO:GO:0000922 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0000236 GO:GO:0046826 GO:GO:0000777 EMBL:AL035681
Pathway_Interaction_DB:ranbp2pathway eggNOG:COG5238 KO:K14319
GO:GO:0005098 PANTHER:PTHR24113 EMBL:X82260 EMBL:AB058738
EMBL:CR456557 EMBL:BC014044 EMBL:BC041396 IPI:IPI00294879
PIR:JC5300 RefSeq:NP_002874.1 UniGene:Hs.183800 PDB:1Z5S PDB:2GRN
PDB:2GRO PDB:2GRP PDB:2GRQ PDB:2GRR PDB:2IO2 PDB:2IO3 PDB:2IY0
PDB:3UIN PDB:3UIO PDB:3UIP PDBsum:1Z5S PDBsum:2GRN PDBsum:2GRO
PDBsum:2GRP PDBsum:2GRQ PDBsum:2GRR PDBsum:2IO2 PDBsum:2IO3
PDBsum:2IY0 PDBsum:3UIN PDBsum:3UIO PDBsum:3UIP
ProteinModelPortal:P46060 SMR:P46060 DIP:DIP-29079N IntAct:P46060
MINT:MINT-3016328 STRING:P46060 PhosphoSite:P46060 DMDM:1172922
PaxDb:P46060 PRIDE:P46060 DNASU:5905 Ensembl:ENST00000356244
Ensembl:ENST00000405383 Ensembl:ENST00000405486
Ensembl:ENST00000455915 GeneID:5905 KEGG:hsa:5905 UCSC:uc003azs.3
CTD:5905 GeneCards:GC22M041641 HGNC:HGNC:9854 HPA:CAB004293
MIM:602362 neXtProt:NX_P46060 PharmGKB:PA34216 HOGENOM:HOG000195026
HOVERGEN:HBG017720 InParanoid:P46060 OMA:SFNSNAF OrthoDB:EOG4K0QN7
ChiTaRS:RANGAP1 EvolutionaryTrace:P46060 GenomeRNAi:5905
NextBio:22968 ArrayExpress:P46060 Bgee:P46060 CleanEx:HS_RANGAP1
Genevestigator:P46060 GermOnline:ENSG00000100401 Gene3D:1.25.40.200
SUPFAM:SSF69099 Uniprot:P46060
Length = 587
Score = 202 (76.2 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 94/347 (27%), Positives = 142/347 (40%)
Query: 112 EMIAEKATAASQTVFDISGGQRGFIEE-------EEAKLLLGPLTEPGNSYTRICFSNKS 164
E IA+ A ++T ++GGQ F + E+AK ++ + E +S + +
Sbjct: 4 EDIAKLAETLAKT--QVAGGQLSFKGKSLKLNTAEDAKDVIKEI-EDFDSLEALRLEGNT 60
Query: 165 FGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSAL--EGSQLRYLNL 222
G+ A+RV A L K +L SD GR E + L G+QL L+L
Sbjct: 61 VGVEAARVIAKALEK-KSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDL 119
Query: 223 SHNALGEKGVRAFGALLKSQN--NLEELHLMNDGIS----EEAAQAILELIPSTEK---- 272
S NA G GV+ F ALLKS L+EL L N G+ + A A+ E +
Sbjct: 120 SDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKP 179
Query: 273 --LKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLK 330
LKV N ++GA A++E + LE+ I G ALA+A L+
Sbjct: 180 LALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLR 239
Query: 331 KLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLD 390
++L DN F + VA++E L + + P L+ L+
Sbjct: 240 VINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELN 299
Query: 391 LAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLE 437
L+ +I L KL+L N L +EG + + LE
Sbjct: 300 LSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLE 346
Score = 169 (64.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 52/208 (25%), Positives = 97/208 (46%)
Query: 161 SNKSFGLGASRVAAPIL----RLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQ 216
+N G+G ++ A L R Q + L F+AGR E + +
Sbjct: 150 NNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGT 209
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVL 276
L +++ N + G+ A L ++L ++ +E+ A A+ E + + +++V+
Sbjct: 210 LEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVI 269
Query: 277 HFHNNMTGDEGAVAISEIVKHS-PALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLR 335
+F + + +GAVAI++ ++ P L++ S I + +A+A+A+ L+KLDL
Sbjct: 270 NFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLN 329
Query: 336 DNMFGVEAGVALSEVLPAFPDLTEVYLS 363
N G E L EVL F ++ +V S
Sbjct: 330 GNTLGEEGCEQLQEVLEGF-NMAKVLAS 356
Score = 167 (63.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 60/255 (23%), Positives = 111/255 (43%)
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA--LEDFRCSSTRIGAEGGIALAKAL 323
LI + +L L +N G +G ++K S L++ + ++ +G GG LA AL
Sbjct: 107 LITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAAL 166
Query: 324 GQCTHL-----KKLDLR-----DNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXX 373
+C K L L+ N + AL+E L EV++
Sbjct: 167 TECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGIT 226
Query: 374 XXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIG 433
P L V++L N T + + +N + ++ +GA+ I
Sbjct: 227 ALAQAFAV-NPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIA 285
Query: 434 KSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEIL 493
++ G +L E++LS +KR A +A+ +K L+ L++NGN + +EG ++++E+L
Sbjct: 286 DAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVL 345
Query: 494 K--HSLDVLGPLDEN 506
+ + VL L ++
Sbjct: 346 EGFNMAKVLASLSDD 360
>MGI|MGI:1921935 [details] [associations]
symbol:4930451C15Rik "RIKEN cDNA 4930451C15 gene"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1921935 GeneTree:ENSGT00640000091171
EMBL:AK039092 EMBL:AK132588 EMBL:AK143245 EMBL:AK161226
EMBL:BC115678 EMBL:BC115679 IPI:IPI00353515 IPI:IPI00406229
IPI:IPI00677034 RefSeq:NP_001138907.1 RefSeq:NP_083329.2
UniGene:Mm.38634 ProteinModelPortal:Q14BP6 SMR:Q14BP6 PRIDE:Q14BP6
Ensembl:ENSMUST00000023442 Ensembl:ENSMUST00000065125
Ensembl:ENSMUST00000100123 GeneID:74685 KEGG:mmu:74685
UCSC:uc007yle.2 UCSC:uc007ylf.2 eggNOG:NOG126824
HOGENOM:HOG000155712 HOVERGEN:HBG108751 InParanoid:Q14BP6
OMA:ISYNGFG OrthoDB:EOG4868CW NextBio:341384 Bgee:Q14BP6
CleanEx:MM_4930451C15RIK Genevestigator:Q14BP6 Uniprot:Q14BP6
Length = 391
Score = 197 (74.4 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 67/260 (25%), Positives = 108/260 (41%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
LNL H LG +GVRA ++L S ++ L L ++G+ A+A+ +++ + +
Sbjct: 82 LNLRHRGLGPQGVRALASVLTSNPYIKRLDLRDNGLCGAGAEALADVLRKNSIISDVDLS 141
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
N G G AI + +P +E + R+ + LA L LK LDL N
Sbjct: 142 ENQIGAAGLQAICTALALNPTVEKMQLQGNRLEEQAAQHLAALLLHHRGLKSLDLSYNQL 201
Query: 340 GVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXX 399
AG L + LTE+ LS+ L+VLD++ N
Sbjct: 202 NDLAGEILGPAVAENTGLTELNLSWNHLRGLGATAFARGLEANI-FLKVLDISHNGFGDS 260
Query: 400 XXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGA- 458
L +LN+ N + GA+ +G L+ I I +S N ++ G
Sbjct: 261 GASAIGDALRVNNVLEELNMRNNRISVSGALKLGLGLQVNQTLRILI-ISKNPIRSDGCV 319
Query: 459 RLLAQVAVNKPG-LKMLNIN 477
LL V NK L++L+++
Sbjct: 320 GLLKSVRNNKSSALELLDVS 339
Score = 171 (65.3 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 82/333 (24%), Positives = 139/333 (41%)
Query: 183 QLTEVDLSDFIAGRPEEEALEVINMFS----SALEGSQLRYLNLSHNA-LGEKGVRAFGA 237
Q E + A P+ E LE ++ SALE L A L K RA
Sbjct: 8 QKNEDQEGEAAATGPQAETLEAERSWTADSHSALEAEGTHGLGERVMATLYLKSCRANSV 67
Query: 238 L----LKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISE 293
+ L Q EL+L + G+ + +A+ ++ S +K L +N GA A+++
Sbjct: 68 VPVSCLLRQEGASELNLRHRGLGPQGVRALASVLTSNPYIKRLDLRDNGLCGAGAEALAD 127
Query: 294 IVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPA 353
+++ + + D S +IGA G A+ AL ++K+ L+ N +A L+ +L
Sbjct: 128 VLRKNSIISDVDLSENQIGAAGLQAICTALALNPTVEKMQLQGNRLEEQAAQHLAALLLH 187
Query: 354 FPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQF 413
L + LSY L L+L+ N + F
Sbjct: 188 HRGLKSLDLSYNQLNDLAGEILGPAVAENT-GLTELNLSWNHLRGLGATAFARGLEANIF 246
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGA-RLLAQVAVNKPGLK 472
L L+++ N D GA IG +L + L E+++ N + +GA +L + VN+ L+
Sbjct: 247 LKVLDISHNGFGDSGASAIGDALRVNN-VLEELNMRNNRISVSGALKLGLGLQVNQT-LR 304
Query: 473 MLNINGNFIPDEG-IDEVKEILKHSLDVLGPLD 504
+L I+ N I +G + +K + + L LD
Sbjct: 305 ILIISKNPIRSDGCVGLLKSVRNNKSSALELLD 337
>UNIPROTKB|F1MAA5 [details] [associations]
symbol:Rangap1 "Protein Rangap1" species:10116 "Rattus
norvegicus" [GO:0005098 "Ran GTPase activator activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834 GO:GO:0048471
GO:GO:0007165 GO:GO:0000776 GO:GO:0046826 GO:GO:0032853
GeneTree:ENSGT00440000039203 GO:GO:0005098 PANTHER:PTHR24113
OMA:SFNSNAF Gene3D:1.25.40.200 SUPFAM:SSF69099 IPI:IPI00471774
PRIDE:F1MAA5 Ensembl:ENSRNOT00000052098 Uniprot:F1MAA5
Length = 586
Score = 200 (75.5 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 95/339 (28%), Positives = 138/339 (40%)
Query: 112 EMIAEKATAASQTVFDISGGQRGFIEE-------EEAKLLLGPLTE-PGNSYTRICFSNK 163
E IA+ A ++T ++GGQ F + E+AK ++ + E G R+
Sbjct: 4 EDIAKLAETLAKT--QVAGGQLSFKGKGLKLNTAEDAKDVIKEIEEFDGLEALRL--EGN 59
Query: 164 SFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSAL--EGSQLRYLN 221
+ G+ A+RV A L K +L SD GR E + L G+QL L+
Sbjct: 60 TVGVEAARVIAKALEK-KSKLKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELD 118
Query: 222 LSHNALGEKGVRAFGALLKSQN--NLEELHLMNDGIS----EEAAQAILELIPSTEK--- 272
LS NA G GVR F ALLKS L+EL L N G+ + A A+ E +
Sbjct: 119 LSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGK 178
Query: 273 ---LKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHL 329
LKV N ++GA A++E LE+ I G ALA+A L
Sbjct: 179 PLTLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLL 238
Query: 330 KKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVL 389
+ ++L DN F + GVA++E L + + P L+ L
Sbjct: 239 RVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKEL 298
Query: 390 DLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEG 428
+L+ +I L KL+L N L +EG
Sbjct: 299 NLSFCEIKRDAALVVAEAGADHAELEKLDLNGNALGEEG 337
Score = 162 (62.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 67/262 (25%), Positives = 117/262 (44%)
Query: 110 GEEMIAEKATAASQTVFDISGGQRGFIEEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGA 169
GE +I A + D + G G + EA LL P + + +N G+G
Sbjct: 104 GEGLITAGAQLVELDLSDNAFGPDG-VRGFEA-LLKSPACF---TLQELKLNNCGMGIGG 158
Query: 170 SRVAAPIL----RLIKDQLTEVDLSDFIAGRPEEE---ALEVINMFSSALEGSQLRYLNL 222
++ A L R Q + L F+AGR E A + F + G+ L +++
Sbjct: 159 GKILAAALTECHRKSSAQGKPLTLKVFVAGRNRLENDGATALAEAFG--IIGT-LEEVHM 215
Query: 223 SHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNM 282
N + GV A L ++L ++ +E+ A+ E + + +++V++F + +
Sbjct: 216 PQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCL 275
Query: 283 TGDEGAVAISEIVKHS-PALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGV 341
+GAVAI++ V+ P L++ S I + + +A+A L+KLDL N G
Sbjct: 276 VRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAGADHAELEKLDLNGNALGE 335
Query: 342 EAGVALSEVLPAFPDLTEVYLS 363
E L EVL +F ++ +V S
Sbjct: 336 EGCEQLQEVLDSF-NMAKVLAS 356
Score = 161 (61.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 58/241 (24%), Positives = 106/241 (43%)
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA---LEDFRCSSTRIGAEGGIALAKA 322
LI + +L L +N G +G ++K SPA L++ + ++ +G GG LA A
Sbjct: 107 LITAGAQLVELDLSDNAFGPDGVRGFEALLK-SPACFTLQELKLNNCGMGIGGGKILAAA 165
Query: 323 LGQCTHL-----KKLDLR-----DNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXX 372
L +C K L L+ N + AL+E L EV++
Sbjct: 166 LTECHRKSSAQGKPLTLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGV 225
Query: 373 XXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILI 432
P L V++L N T + + +N + ++ +GA+ I
Sbjct: 226 TALAQAFAI-NPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAI 284
Query: 433 GKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEI 492
++ G +L E++LS +KR A ++A+ + L+ L++NGN + +EG ++++E+
Sbjct: 285 ADAVRGGLPKLKELNLSFCEIKRDAALVVAEAGADHAELEKLDLNGNALGEEGCEQLQEV 344
Query: 493 L 493
L
Sbjct: 345 L 345
>UNIPROTKB|O13066 [details] [associations]
symbol:rangap1 "Ran GTPase-activating protein 1"
species:8355 "Xenopus laevis" [GO:0000776 "kinetochore"
evidence=ISS] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
GO:GO:0005737 GO:GO:0007165 GO:GO:0032853 GO:GO:0005098
PANTHER:PTHR24113 HOVERGEN:HBG017720 Gene3D:1.25.40.200
SUPFAM:SSF69099 EMBL:U88155 UniGene:Xl.57165
ProteinModelPortal:O13066 SMR:O13066 PRIDE:O13066
Xenbase:XB-GENE-6464329 Uniprot:O13066
Length = 580
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 79/286 (27%), Positives = 115/286 (40%)
Query: 166 GLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSAL--EGSQLRYLNLS 223
G+ A++ A +L+ K L SD GR E + AL G+QL L+LS
Sbjct: 62 GVEAAKAIAEVLQR-KPDLKRCHWSDMFTGRLRPEIPTALRSLGDALITAGAQLTELDLS 120
Query: 224 HNALGEKGVRAFGALLKSQN--NLEELHLMNDGISEEAAQAILELIPSTEK--------- 272
NA G GVR F ALLKS L+EL L N G+ + + + K
Sbjct: 121 DNAFGPDGVRGFEALLKSPTCFTLQELKLNNCGMGIGGGKILAAALTECHKKSSAHGKPL 180
Query: 273 -LKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKK 331
LKV N ++GA A+SE + LE+ I G ALA++ + LK
Sbjct: 181 ALKVFIAGRNRLENDGATALSEAFRLIGTLEEVHMPQNGINHAGITALAESFKANSLLKV 240
Query: 332 LDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDL 391
++L DN F + GVA++E L + + L+ L+L
Sbjct: 241 INLNDNTFTEKGGVAMAEALKTLRQVEVINFGDCLVRSKGAQAIASALKEGLHKLKDLNL 300
Query: 392 AGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLE 437
+ +I L KL+L N L +EG + + LE
Sbjct: 301 SYCEIKADAAVSLAESVEDKSDLEKLDLNGNCLGEEGCEQVQEILE 346
Score = 176 (67.0 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 65/256 (25%), Positives = 116/256 (45%)
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA---LEDFRCSSTRIGAEGGIALAKA 322
LI + +L L +N G +G ++K SP L++ + ++ +G GG LA A
Sbjct: 107 LITAGAQLTELDLSDNAFGPDGVRGFEALLK-SPTCFTLQELKLNNCGMGIGGGKILAAA 165
Query: 323 LGQC-----THLKKLDLR-----DNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXX 372
L +C H K L L+ N + ALSE L EV++
Sbjct: 166 LTECHKKSSAHGKPLALKVFIAGRNRLENDGATALSEAFRLIGTLEEVHMPQNGINHAGI 225
Query: 373 XXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILI 432
+ L+V++L N T + + +N + ++ +GA I
Sbjct: 226 TALAESFKANS-LLKVINLNDNTFTEKGGVAMAEALKTLRQVEVINFGDCLVRSKGAQAI 284
Query: 433 GKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEI 492
+L+EG +L +++LS +K A LA+ +K L+ L++NGN + +EG ++V+EI
Sbjct: 285 ASALKEGLHKLKDLNLSYCEIKADAAVSLAESVEDKSDLEKLDLNGNCLGEEGCEQVQEI 344
Query: 493 LK--HSLDVLGPLDEN 506
L+ + ++LG L ++
Sbjct: 345 LESINMANILGSLSDD 360
Score = 157 (60.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 51/198 (25%), Positives = 97/198 (48%)
Query: 161 SNKSFGLGASRV-AAPILRLIKDQLTE---VDLSDFIAGRPEEEALEVINMFSSA--LEG 214
+N G+G ++ AA + K + L FIAGR E + S A L G
Sbjct: 150 NNCGMGIGGGKILAAALTECHKKSSAHGKPLALKVFIAGRNRLEN-DGATALSEAFRLIG 208
Query: 215 SQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLK 274
+ L +++ N + G+ A K+ + L+ ++L ++ +E+ A+ E + + +++
Sbjct: 209 T-LEEVHMPQNGINHAGITALAESFKANSLLKVINLNDNTFTEKGGVAMAEALKTLRQVE 267
Query: 275 VLHFHNNMTGDEGAVAISEIVKHS-PALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLD 333
V++F + + +GA AI+ +K L+D S I A+ ++LA+++ + L+KLD
Sbjct: 268 VINFGDCLVRSKGAQAIASALKEGLHKLKDLNLSYCEIKADAAVSLAESVEDKSDLEKLD 327
Query: 334 LRDNMFGVEAGVALSEVL 351
L N G E + E+L
Sbjct: 328 LNGNCLGEEGCEQVQEIL 345
>ZFIN|ZDB-GENE-040426-1921 [details] [associations]
symbol:rangap1b "Ran GTPase activating protein 1b"
species:7955 "Danio rerio" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
ZFIN:ZDB-GENE-040426-1921 GO:GO:0007165 GO:GO:0032853 HSSP:P41391
GO:GO:0005098 PANTHER:PTHR24113 HOGENOM:HOG000195026
HOVERGEN:HBG017720 Gene3D:1.25.40.200 SUPFAM:SSF69099 EMBL:BC054654
IPI:IPI00505852 RefSeq:NP_998154.1 UniGene:Dr.77291
ProteinModelPortal:Q7SYN0 STRING:Q7SYN0 PRIDE:Q7SYN0 GeneID:568424
KEGG:dre:568424 CTD:568424 NextBio:20889164 ArrayExpress:Q7SYN0
Bgee:Q7SYN0 Uniprot:Q7SYN0
Length = 577
Score = 196 (74.1 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 66/255 (25%), Positives = 112/255 (43%)
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA--LEDFRCSSTRIGAEGGIALAKAL 323
L+ S +L L +N G +G I ++K S L++ R ++ +G+ GG+ LA AL
Sbjct: 107 LMTSGARLTQLDLSDNAFGPDGVKGIENLLKSSACYTLQELRLNNCGMGSGGGVVLASAL 166
Query: 324 GQC----------THLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXX 373
+C LK N + AL++ L EV++
Sbjct: 167 TECHKQSSAAASPLRLKVFIAGRNRLENDGATALAKAFKLLGSLEEVHMPQNGINHPGIT 226
Query: 374 XXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIG 433
P+L+VL+L N T Q L +N + ++ EGAI I
Sbjct: 227 ALAAALKH-NPNLQVLNLNDNTFTTKGSKAMAEAIRNLQCLKAINFGDCLVRSEGAIAIA 285
Query: 434 KSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEIL 493
+L EG L E++LS + A A ++A+ K L+ L++NGN ++G + +KE +
Sbjct: 286 GALREGLHLLRELNLSFGEICEAAAMVVAKAVQGKADLEKLDLNGNCFGEDGCEALKEAM 345
Query: 494 -KHSL-DVLGPLDEN 506
K ++ D+L L ++
Sbjct: 346 EKMNMEDLLCSLSDD 360
Score = 167 (63.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 74/289 (25%), Positives = 115/289 (39%)
Query: 164 SFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSAL--EGSQLRYLN 221
+ G+ A+ A L K +L + SD GR E + +AL G++L L+
Sbjct: 60 TLGVEAADAIAKSLEA-KRELEQCHWSDMFTGRLRSEIPPALKSLGNALMTSGARLTQLD 118
Query: 222 LSHNALGEKGVRAFGALLKSQN--NLEELHLMNDGISEEA----AQAILEL------IPS 269
LS NA G GV+ LLKS L+EL L N G+ A A+ E S
Sbjct: 119 LSDNAFGPDGVKGIENLLKSSACYTLQELRLNNCGMGSGGGVVLASALTECHKQSSAAAS 178
Query: 270 TEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHL 329
+LKV N ++GA A+++ K +LE+ I G ALA AL +L
Sbjct: 179 PLRLKVFIAGRNRLENDGATALAKAFKLLGSLEEVHMPQNGINHPGITALAAALKHNPNL 238
Query: 330 KKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVL 389
+ L+L DN F + A++E + L + L L
Sbjct: 239 QVLNLNDNTFTTKGSKAMAEAIRNLQCLKAINFGDCLVRSEGAIAIAGALREGLHLLREL 298
Query: 390 DLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEE 438
+L+ +I L KL+L N ++G + +++E+
Sbjct: 299 NLSFGEICEAAAMVVAKAVQGKADLEKLDLNGNCFGEDGCEALKEAMEK 347
Score = 165 (63.1 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 58/199 (29%), Positives = 93/199 (46%)
Query: 161 SNKSFGLGASRVAAPILRLIKDQ----LTEVDLSDFIAGRPEEE---ALEVINMFSSALE 213
+N G G V A L Q + + L FIAGR E A + F L
Sbjct: 150 NNCGMGSGGGVVLASALTECHKQSSAAASPLRLKVFIAGRNRLENDGATALAKAFK--LL 207
Query: 214 GSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKL 273
GS L +++ N + G+ A A LK NL+ L+L ++ + + ++A+ E I + + L
Sbjct: 208 GS-LEEVHMPQNGINHPGITALAAALKHNPNLQVLNLNDNTFTTKGSKAMAEAIRNLQCL 266
Query: 274 KVLHFHNNMTGDEGAVAISEIVKHS-PALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
K ++F + + EGA+AI+ ++ L + S I + +AKA+ L+KL
Sbjct: 267 KAINFGDCLVRSEGAIAIAGALREGLHLLRELNLSFGEICEAAAMVVAKAVQGKADLEKL 326
Query: 333 DLRDNMFGVEAGVALSEVL 351
DL N FG + AL E +
Sbjct: 327 DLNGNCFGEDGCEALKEAM 345
Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
Identities = 44/158 (27%), Positives = 72/158 (45%)
Query: 179 LIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQ-LRYLNLSHNALGEKGVRAFGA 237
L K + EV+LS G + A E + +E Q L+ L L N LG + A
Sbjct: 13 LAKTHVGEVELSYKGRGLKLDNA-ESVKEIVEDIERCQGLQSLRLEGNTLGVEAADAIAK 71
Query: 238 LLKSQNNLEELH---LMNDGISEEAAQAILEL----IPSTEKLKVLHFHNNMTGDEGAVA 290
L+++ LE+ H + + E A+ L + S +L L +N G +G
Sbjct: 72 SLEAKRELEQCHWSDMFTGRLRSEIPPALKSLGNALMTSGARLTQLDLSDNAFGPDGVKG 131
Query: 291 ISEIVKHSPA--LEDFRCSSTRIGAEGGIALAKALGQC 326
I ++K S L++ R ++ +G+ GG+ LA AL +C
Sbjct: 132 IENLLKSSACYTLQELRLNNCGMGSGGGVVLASALTEC 169
>UNIPROTKB|F1NIE8 [details] [associations]
symbol:RANGAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005098 "Ran GTPase activator activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0046826 "negative
regulation of protein export from nucleus" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834 GO:GO:0048471
GO:GO:0007165 GO:GO:0000776 GO:GO:0046826 GO:GO:0032853
GeneTree:ENSGT00440000039203 GO:GO:0005098 PANTHER:PTHR24113
OMA:SFNSNAF Gene3D:1.25.40.200 SUPFAM:SSF69099 EMBL:AADN02006075
EMBL:AADN02006074 IPI:IPI00583992 PRIDE:F1NIE8
Ensembl:ENSGALT00000019518 ArrayExpress:F1NIE8 Uniprot:F1NIE8
Length = 579
Score = 194 (73.4 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 92/348 (26%), Positives = 141/348 (40%)
Query: 112 EMIAEKATAASQTVFDISGGQRGFIEE-------EEAKLLLGPLTE-PGNSYTRICFSNK 163
E IA+ A + ++T + GGQ F + E+A+ ++ + E G R+
Sbjct: 4 EDIAKLAESLAKT--KVGGGQLSFKGQSLKLNTAEDAEEVIKQIEEFDGLEALRL--EGN 59
Query: 164 SFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSAL--EGSQLRYLN 221
+ G+ A++V A L K +L SD GR E + AL G+QL L+
Sbjct: 60 TVGVEAAKVIAKALEK-KSELKRCHWSDMFTGRLRSEIPPALISLGDALITAGAQLVELD 118
Query: 222 LSHNALGEKGVRAFGALLKSQN--NLEELHLMNDGISEEAAQAILELIPSTEK------- 272
LS NA G GVR F ALLKS L+EL L N G+ + + + +
Sbjct: 119 LSDNAFGPDGVRGFEALLKSPACYTLQELKLNNCGMGIGGGKILAAALKECHRKSSAQGK 178
Query: 273 ---LKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHL 329
LK+ N ++GA A++E LE+ I G ALA+A + L
Sbjct: 179 PLALKIFMAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGITALAQAFAINSLL 238
Query: 330 KKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVL 389
K ++L DN F + VA++E L A + + L+ L
Sbjct: 239 KVINLNDNTFTEKGAVAMAETLKALRQVEVINFGDCLVRSKGALAIADALKEGLHKLKEL 298
Query: 390 DLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLE 437
+L+ +I L KL+L N L +EG + + LE
Sbjct: 299 NLSFCEIKRDAALSVAEAIEDKVELEKLDLNGNSLGEEGCEQLQEILE 346
Score = 175 (66.7 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 66/256 (25%), Positives = 118/256 (46%)
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA---LEDFRCSSTRIGAEGGIALAKA 322
LI + +L L +N G +G ++K SPA L++ + ++ +G GG LA A
Sbjct: 107 LITAGAQLVELDLSDNAFGPDGVRGFEALLK-SPACYTLQELKLNNCGMGIGGGKILAAA 165
Query: 323 LGQCTHL-----KKLDLRDNMFGV-----EAGVALSEVLPAFPDLTEVYLSYXXXXXXXX 372
L +C K L L+ M G + AL+E L EV++
Sbjct: 166 LKECHRKSSAQGKPLALKIFMAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGI 225
Query: 373 XXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILI 432
+ L+V++L N T + + +N + ++ +GA+ I
Sbjct: 226 TALAQAFAINS-LLKVINLNDNTFTEKGAVAMAETLKALRQVEVINFGDCLVRSKGALAI 284
Query: 433 GKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEI 492
+L+EG +L E++LS +KR A +A+ +K L+ L++NGN + +EG ++++EI
Sbjct: 285 ADALKEGLHKLKELNLSFCEIKRDAALSVAEAIEDKVELEKLDLNGNSLGEEGCEQLQEI 344
Query: 493 LK--HSLDVLGPLDEN 506
L+ + VLG L ++
Sbjct: 345 LEGFNMATVLGSLSDD 360
Score = 118 (46.6 bits), Expect = 0.00093, P = 0.00093
Identities = 76/357 (21%), Positives = 144/357 (40%)
Query: 157 RICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEG-S 215
++ F +S L + A +++ Q+ E D + + +E + + ALE S
Sbjct: 22 QLSFKGQSLKLNTAEDAEEVIK----QIEEFDGLEALRLEGNTVGVEAAKVIAKALEKKS 77
Query: 216 QLRYLNLSHNALGE------KGVRAFG-ALLKSQNNLEELHLMNDGISEEAAQAILELI- 267
+L+ + S G + + G AL+ + L EL L ++ + + L+
Sbjct: 78 ELKRCHWSDMFTGRLRSEIPPALISLGDALITAGAQLVELDLSDNAFGPDGVRGFEALLK 137
Query: 268 -PSTEKLKVLHFHNNMTGDEG----AVAISEIVKHS-----P-ALEDFRCSSTRIGAEGG 316
P+ L+ L +N G G A A+ E + S P AL+ F R+ +G
Sbjct: 138 SPACYTLQELKLNNCGMGIGGGKILAAALKECHRKSSAQGKPLALKIFMAGRNRLENDGA 197
Query: 317 IALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXX 376
ALA+A G L+++ + N AL++ A L +V
Sbjct: 198 TALAEAFGIIGTLEEVHMPQNGINHPGITALAQAF-AINSLLKVINLNDNTFTEKGAVAM 256
Query: 377 XXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQF--LTKLNLAENELQDEGAILIGK 434
+EV++ G+ + L +LNL+ E++ + A+ + +
Sbjct: 257 AETLKALRQVEVINF-GDCLVRSKGALAIADALKEGLHKLKELNLSFCEIKRDAALSVAE 315
Query: 435 SLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKE 491
++E+ +L ++DL+ NS+ G L ++ G M + G+ DEG +E +E
Sbjct: 316 AIED-KVELEKLDLNGNSLGEEGCEQLQEIL---EGFNMATVLGSLSDDEGEEEDEE 368
>UNIPROTKB|Q9M7N6 [details] [associations]
symbol:MAF1 "MFP1 attachment factor 1" species:4081
"Solanum lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
GO:GO:0005794 GO:GO:0005635 GO:GO:0016363 EMBL:AF118113
RefSeq:NP_001234193.1 UniGene:Les.13671 IntAct:Q9M7N6
EnsemblPlants:Solyc04g078380.1.1 GeneID:543586 InterPro:IPR025265
Pfam:PF13943 Uniprot:Q9M7N6
Length = 152
Score = 170 (64.9 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 46/144 (31%), Positives = 73/144 (50%)
Query: 2 DSTTETLQHHAL--SVKLWPPSQSTRLMLVQRMTKNLTTPSIFSRKYGLLSXXXXXXXXX 59
++ T+ Q+ + S +WPP+Q TR ++ R+ ++L+TPSI S++YG L
Sbjct: 11 ETVTQETQNKPMTTSFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEASETAR 70
Query: 60 XXXXLAFAAANQHYEKEPDGDGSSSVQIYAKESSKLMLEVIKR--GPRTKEDGEEMIAEK 117
AFAAA + D DG +Q+Y+KE SK M++ +K P +GE +E
Sbjct: 71 LIEEEAFAAAGST-ASDAD-DGIEILQVYSKEISKRMIDTVKSRSAPAAASEGESKPSEL 128
Query: 118 ATAASQTVFDISG--GQRGFIEEE 139
AS+ SG G+ +E E
Sbjct: 129 PADASEPS-SASGLTGEVSSVETE 151
>UNIPROTKB|F1MFD5 [details] [associations]
symbol:RANGAP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0005098 "Ran GTPase
activator activity" evidence=IEA] InterPro:IPR009109
InterPro:IPR027038 Pfam:PF07834 GO:GO:0048471 GO:GO:0007165
GO:GO:0000776 GO:GO:0046826 GO:GO:0032853
GeneTree:ENSGT00440000039203 GO:GO:0005098 PANTHER:PTHR24113
OMA:SFNSNAF Gene3D:1.25.40.200 SUPFAM:SSF69099 EMBL:DAAA02014729
EMBL:DAAA02014730 IPI:IPI00876799 UniGene:Bt.11079
Ensembl:ENSBTAT00000012125 ArrayExpress:F1MFD5 Uniprot:F1MFD5
Length = 585
Score = 191 (72.3 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 92/347 (26%), Positives = 139/347 (40%)
Query: 112 EMIAEKATAASQTVFDISGGQRGFIEE-------EEAKLLLGPLTEPGNSYTRICFSNKS 164
E IA+ A ++T ++GGQ F + ++AK ++ + E + + +
Sbjct: 4 EDIAKLAETLAKT--QVAGGQLSFKGKSLKLNTADDAKDVIKEI-EDFDGLEALRLEGNT 60
Query: 165 FGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSAL--EGSQLRYLNL 222
G+ A+RV A L K +L SD GR E + L G+QL L+L
Sbjct: 61 VGVEAARVIAKALEK-KPELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDL 119
Query: 223 SHNALGEKGVRAFGALLKSQN--NLEELHLMNDGIS----EEAAQAILELIPSTEK---- 272
S NA G GVR F ALLKS L EL L N G+ + A A+ E +
Sbjct: 120 SDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALTECHRKSSAQGKP 179
Query: 273 --LKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLK 330
LKV N ++GA A++E LE+ I G ALA+A L+
Sbjct: 180 LALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLR 239
Query: 331 KLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLD 390
++L DN F + VA+++ L + + P L+ L+
Sbjct: 240 VINLNDNTFTEKGAVAMAKTLKTLRQVEVINFGDCLVRSKGAIAIADAIHGGLPKLKELN 299
Query: 391 LAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLE 437
L+ +I L KL+L N L +EG + + LE
Sbjct: 300 LSFGEIKREAALSVAEAVADKTELEKLDLNGNMLGEEGCEQLQEVLE 346
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 54/202 (26%), Positives = 97/202 (48%)
Query: 161 SNKSFGLGASRVAAPIL----RLIKDQLTEVDLSDFIAGRPEEE---ALEVINMFSSALE 213
+N G+G ++ A L R Q + L F+AGR E A + F +
Sbjct: 150 NNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFG--II 207
Query: 214 GSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKL 273
G+ L +++ N + GV A L ++L ++ +E+ A A+ + + + ++
Sbjct: 208 GT-LEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQV 266
Query: 274 KVLHFHNNMTGDEGAVAISEIVKHS-PALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
+V++F + + +GA+AI++ + P L++ S I E +++A+A+ T L+KL
Sbjct: 267 EVINFGDCLVRSKGAIAIADAIHGGLPKLKELNLSFGEIKREAALSVAEAVADKTELEKL 326
Query: 333 DLRDNMFGVEAGVALSEVLPAF 354
DL NM G E L EVL F
Sbjct: 327 DLNGNMLGEEGCEQLQEVLEGF 348
Score = 169 (64.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/241 (24%), Positives = 104/241 (43%)
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA--LEDFRCSSTRIGAEGGIALAKAL 323
LI + +L L +N G +G ++K S L + + ++ +G GG LA AL
Sbjct: 107 LITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAAL 166
Query: 324 GQCTHL-----KKLDLR-----DNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXX 373
+C K L L+ N + AL+E L EV++
Sbjct: 167 TECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVT 226
Query: 374 XXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIG 433
P L V++L N T + + +N + ++ +GAI I
Sbjct: 227 ALAQAFAI-NPLLRVINLNDNTFTEKGAVAMAKTLKTLRQVEVINFGDCLVRSKGAIAIA 285
Query: 434 KSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEIL 493
++ G +L E++LS +KR A +A+ +K L+ L++NGN + +EG ++++E+L
Sbjct: 286 DAIHGGLPKLKELNLSFGEIKREAALSVAEAVADKTELEKLDLNGNMLGEEGCEQLQEVL 345
Query: 494 K 494
+
Sbjct: 346 E 346
>UNIPROTKB|F1PVY6 [details] [associations]
symbol:RANGAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005098 "Ran GTPase activator activity"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
GO:GO:0007165 GO:GO:0032853 GeneTree:ENSGT00440000039203
GO:GO:0005098 PANTHER:PTHR24113 Gene3D:1.25.40.200 SUPFAM:SSF69099
EMBL:AAEX03007299 Ensembl:ENSCAFT00000001695 Uniprot:F1PVY6
Length = 628
Score = 190 (71.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 91/338 (26%), Positives = 134/338 (39%)
Query: 112 EMIAEKATAASQTVFDISGGQRGFIEE-------EEAKLLLGPLTEPGNSYTRICFSNKS 164
E IA+ A ++T ++GGQ F + E+AK ++ + E + + +
Sbjct: 45 EDIAKLAETLAKT--QVAGGQLSFKGKSLKLNTAEDAKDVIKEI-EDFDGLEALRLEGNT 101
Query: 165 FGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSAL--EGSQLRYLNL 222
G+ A+RV A L K +L SD GR E + L G+QL L+L
Sbjct: 102 VGVEAARVIAKALEK-KSELKRCHWSDMFTGRLRSEIPPALTSLGEGLITAGAQLVELDL 160
Query: 223 SHNALGEKGVRAFGALLKSQN--NLEELHLMNDGIS----EEAAQAILELIPSTEK---- 272
S NA G GVR F ALLKS L EL L N G+ + A A+ E +
Sbjct: 161 SDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALTECHRKSSAQGKP 220
Query: 273 --LKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLK 330
LKV N ++GA A++E LE+ I G ALA+A L+
Sbjct: 221 LGLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLR 280
Query: 331 KLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLD 390
++L DN F + VA+++ L + P L+ L+
Sbjct: 281 VINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLVRSKGAVAIAEAVRGGLPKLKELN 340
Query: 391 LAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEG 428
L+ +I L KL+L N L +EG
Sbjct: 341 LSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEEG 378
Score = 174 (66.3 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 56/202 (27%), Positives = 96/202 (47%)
Query: 161 SNKSFGLGASRVAAPIL----RLIKDQLTEVDLSDFIAGRPEEE---ALEVINMFSSALE 213
+N G+G ++ A L R Q + L F+AGR E A + F +
Sbjct: 191 NNCGMGIGGGKILAAALTECHRKSSAQGKPLGLKVFVAGRNRLENDGATALAEAFG--II 248
Query: 214 GSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKL 273
G+ L +++ N + GV A L ++L ++ +E+ A A+ + + + +
Sbjct: 249 GT-LEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQA 307
Query: 274 KVLHFHNNMTGDEGAVAISEIVKHS-PALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
+V++F + + +GAVAI+E V+ P L++ S I + +A+A+A+ L+KL
Sbjct: 308 EVINFGDCLVRSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKL 367
Query: 333 DLRDNMFGVEAGVALSEVLPAF 354
DL NM G E L EVL F
Sbjct: 368 DLNGNMLGEEGCEQLQEVLDGF 389
Score = 164 (62.8 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 57/240 (23%), Positives = 103/240 (42%)
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA--LEDFRCSSTRIGAEGGIALAKAL 323
LI + +L L +N G +G ++K S L + + ++ +G GG LA AL
Sbjct: 148 LITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAAL 207
Query: 324 GQCTHL-----KKLDLR-----DNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXX 373
+C K L L+ N + AL+E L EV++
Sbjct: 208 TECHRKSSAQGKPLGLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVT 267
Query: 374 XXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIG 433
P L V++L N T + +N + ++ +GA+ I
Sbjct: 268 ALAQAFAI-NPLLRVINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLVRSKGAVAIA 326
Query: 434 KSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEIL 493
+++ G +L E++LS +KR A +A+ +K L+ L++NGN + +EG ++++E+L
Sbjct: 327 EAVRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEEGCEQLQEVL 386
>ZFIN|ZDB-GENE-081028-16 [details] [associations]
symbol:si:ch211-233m11.1 "si:ch211-233m11.1"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-081028-16 GO:GO:0005524
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00690000101934
EMBL:BX571701 IPI:IPI00861537 Ensembl:ENSDART00000138143
Uniprot:F1QBA5
Length = 1057
Score = 193 (73.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 88/313 (28%), Positives = 133/313 (42%)
Query: 167 LGASRVAAPILRLIKDQLTEVD-LSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHN 225
+G SRV + +KD +++ L F G E + ++ + S L LR L+LS N
Sbjct: 745 VGDSRVKL-LFAALKDPHCKLEKLMLFNCGISNEGSADLASALRSNLN---LRELDLSGN 800
Query: 226 ALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAI-LELIPSTEKLKVLHFHNNMTG 284
L + GV+ LK LE L L GIS+E A+ L L ++ L+ L N G
Sbjct: 801 KLRDSGVKLLSDGLKDCK-LEILRLCYCGISDEGCAALALALRSASSNLRELDLIGNRLG 859
Query: 285 DEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKALGQCT--HLKKLDLRDNMFGV 341
D G +S +K+ LE R + I +G ALA AL + +L++LDL DN
Sbjct: 860 DSGVKLLSAGLKNPHCKLEALRLKNCGITNKGCDALASALRSVSTANLRELDLCDNRLR- 918
Query: 342 EAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXX 401
++GV L P L + +L LDL GN +
Sbjct: 919 DSGVRLLSARLEDPHCKLEKLRLCNCEIEDCADLASTLKLNSSNLRELDLTGNKLGDSGV 978
Query: 402 XXXXXXXXXXQF-LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARL 460
L KL L + + DEG + +L L E+DL+ N++ +G +L
Sbjct: 979 KLLSDGLKDAHCKLEKLRLIKCGITDEGCTALASALRSPSSNLRELDLTGNNVGDSGGKL 1038
Query: 461 LAQVAVNKPGLKM 473
L+ V + P K+
Sbjct: 1039 LSDVK-DDPNCKL 1050
Score = 167 (63.8 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 86/360 (23%), Positives = 147/360 (40%)
Query: 148 LTEPGNSYTRI-CFSNKSFGLGASRVAAPILRLIK-DQLTEVDLSDFIAGRPEEEAL--- 202
L + Y R C N L +S+ +A + L+ +QL DLS +I+ E +
Sbjct: 636 LVKEVQQYVRSGCLLNTR--LSSSQWSAVVFVLVNSEQLDSFDLSKYISREKHENVMTPD 693
Query: 203 EVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQ 261
EV+ +E S R LS + ++G + L S + NL EL+L + + +
Sbjct: 694 EVLQKLVPVVEAS--RSARLSKCDISDEGCAVLSSALSSHSSNLRELNLTEIYVGDSRVK 751
Query: 262 AILELIPSTE-KLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALA 320
+ + KL+ L N +EG+ ++ ++ + L + S ++ G L+
Sbjct: 752 LLFAALKDPHCKLEKLMLFNCGISNEGSADLASALRSNLNLRELDLSGNKLRDSGVKLLS 811
Query: 321 KALGQCTHLKKLD-LRDNMFGV--EAGVALSEVL-PAFPDLTEVYLSYXXXXXXXXXXXX 376
L C KL+ LR G+ E AL+ L A +L E+ L
Sbjct: 812 DGLKDC----KLEILRLCYCGISDEGCAALALALRSASSNLRELDLIGNRLGDSGVKLLS 867
Query: 377 XXXXXCAPSLEVLDLAGNDITXXX--XXXXXXXXXXXQFLTKLNLAENELQDEGAILIGK 434
LE L L IT L +L+L +N L+D G L+
Sbjct: 868 AGLKNPHCKLEALRLKNCGITNKGCDALASALRSVSTANLRELDLCDNRLRDSGVRLLSA 927
Query: 435 SLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILK 494
LE+ H +L ++ L ++ A L + + +N L+ L++ GN + D G+ + + LK
Sbjct: 928 RLEDPHCKLEKLRLCNCEIEDC-ADLASTLKLNSSNLRELDLTGNKLGDSGVKLLSDGLK 986
>UNIPROTKB|J9NZ28 [details] [associations]
symbol:RANGAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005098 "Ran GTPase activator activity"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
GO:GO:0007165 GO:GO:0032853 GeneTree:ENSGT00440000039203
GO:GO:0005098 PANTHER:PTHR24113 OMA:SFNSNAF Gene3D:1.25.40.200
SUPFAM:SSF69099 EMBL:AAEX03007299 Ensembl:ENSCAFT00000043188
Uniprot:J9NZ28
Length = 641
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 91/338 (26%), Positives = 134/338 (39%)
Query: 112 EMIAEKATAASQTVFDISGGQRGFIEE-------EEAKLLLGPLTEPGNSYTRICFSNKS 164
E IA+ A ++T ++GGQ F + E+AK ++ + E + + +
Sbjct: 58 EDIAKLAETLAKT--QVAGGQLSFKGKSLKLNTAEDAKDVIKEI-EDFDGLEALRLEGNT 114
Query: 165 FGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSAL--EGSQLRYLNL 222
G+ A+RV A L K +L SD GR E + L G+QL L+L
Sbjct: 115 VGVEAARVIAKALEK-KSELKRCHWSDMFTGRLRSEIPPALTSLGEGLITAGAQLVELDL 173
Query: 223 SHNALGEKGVRAFGALLKSQN--NLEELHLMNDGIS----EEAAQAILELIPSTEK---- 272
S NA G GVR F ALLKS L EL L N G+ + A A+ E +
Sbjct: 174 SDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALTECHRKSSAQGKP 233
Query: 273 --LKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLK 330
LKV N ++GA A++E LE+ I G ALA+A L+
Sbjct: 234 LGLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLR 293
Query: 331 KLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLD 390
++L DN F + VA+++ L + P L+ L+
Sbjct: 294 VINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLVRSKGAVAIAEAVRGGLPKLKELN 353
Query: 391 LAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEG 428
L+ +I L KL+L N L +EG
Sbjct: 354 LSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEEG 391
Score = 174 (66.3 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 56/202 (27%), Positives = 96/202 (47%)
Query: 161 SNKSFGLGASRVAAPIL----RLIKDQLTEVDLSDFIAGRPEEE---ALEVINMFSSALE 213
+N G+G ++ A L R Q + L F+AGR E A + F +
Sbjct: 204 NNCGMGIGGGKILAAALTECHRKSSAQGKPLGLKVFVAGRNRLENDGATALAEAFG--II 261
Query: 214 GSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKL 273
G+ L +++ N + GV A L ++L ++ +E+ A A+ + + + +
Sbjct: 262 GT-LEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQA 320
Query: 274 KVLHFHNNMTGDEGAVAISEIVKHS-PALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
+V++F + + +GAVAI+E V+ P L++ S I + +A+A+A+ L+KL
Sbjct: 321 EVINFGDCLVRSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKL 380
Query: 333 DLRDNMFGVEAGVALSEVLPAF 354
DL NM G E L EVL F
Sbjct: 381 DLNGNMLGEEGCEQLQEVLDGF 402
Score = 164 (62.8 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 57/240 (23%), Positives = 103/240 (42%)
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA--LEDFRCSSTRIGAEGGIALAKAL 323
LI + +L L +N G +G ++K S L + + ++ +G GG LA AL
Sbjct: 161 LITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAAL 220
Query: 324 GQCTHL-----KKLDLR-----DNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXX 373
+C K L L+ N + AL+E L EV++
Sbjct: 221 TECHRKSSAQGKPLGLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVT 280
Query: 374 XXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIG 433
P L V++L N T + +N + ++ +GA+ I
Sbjct: 281 ALAQAFAI-NPLLRVINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLVRSKGAVAIA 339
Query: 434 KSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEIL 493
+++ G +L E++LS +KR A +A+ +K L+ L++NGN + +EG ++++E+L
Sbjct: 340 EAVRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEEGCEQLQEVL 399
>UNIPROTKB|H0Y4Q3 [details] [associations]
symbol:RANGAP1 "Ran GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 GO:GO:0007165
EMBL:AL035681 GO:GO:0032853 GO:GO:0005098 PANTHER:PTHR24113
HGNC:HGNC:9854 ChiTaRS:RANGAP1 Gene3D:1.25.40.200 EMBL:AL035659
ProteinModelPortal:H0Y4Q3 PRIDE:H0Y4Q3 Ensembl:ENST00000446258
Bgee:H0Y4Q3 Uniprot:H0Y4Q3
Length = 253
Score = 173 (66.0 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 66/236 (27%), Positives = 100/236 (42%)
Query: 166 GLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSAL--EGSQLRYLNLS 223
G+ A+RV A L K +L SD GR E + L G+QL L+LS
Sbjct: 3 GVEAARVIAKALEK-KSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLS 61
Query: 224 HNALGEKGVRAFGALLKSQN--NLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNN 281
NA G GV+ F ALLKS L+EL L N G+ + I T L+ +H N
Sbjct: 62 DNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKVI-----GT--LEEVHMPQN 114
Query: 282 MTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGV 341
G A+++ +P L + +G +A+A+ L ++ ++ D +
Sbjct: 115 GINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRS 174
Query: 342 EAGVALSEVLPA-FPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDI 396
+ VA+++ + P L E+ LS+ A LE LDL GN +
Sbjct: 175 KGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKA-ELEKLDLNGNTL 229
Score = 155 (59.6 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 39/148 (26%), Positives = 76/148 (51%)
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVL 276
L +++ N + G+ A L ++L ++ +E+ A A+ E + + +++V+
Sbjct: 106 LEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVI 165
Query: 277 HFHNNMTGDEGAVAISEIVKHS-PALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLR 335
+F + + +GAVAI++ ++ P L++ S I + +A+A+A+ L+KLDL
Sbjct: 166 NFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLN 225
Query: 336 DNMFGVEAGVALSEVLPAFPDLTEVYLS 363
N G E L EVL F ++ +V S
Sbjct: 226 GNTLGEEGCEQLQEVLEGF-NMAKVLAS 252
Score = 150 (57.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 56/250 (22%), Positives = 108/250 (43%)
Query: 255 ISEEAAQAILELIPSTEKLKVLHFHNNMTG------DEGAVAISE-IVKHSPALEDFRCS 307
+ EAA+ I + + +LK H+ + TG +++ E ++ L + S
Sbjct: 2 VGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLS 61
Query: 308 STRIGAEG--GI-ALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSY 364
G +G G AL K+ C L++L L + G+ G + L EV++
Sbjct: 62 DNAFGPDGVQGFEALLKS-SACFTLQELKLNNCGMGIGGGKVIGT-------LEEVHMPQ 113
Query: 365 XXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENEL 424
P L V++L N T + + +N + +
Sbjct: 114 NGINHPGITALAQAFAV-NPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLV 172
Query: 425 QDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDE 484
+ +GA+ I ++ G +L E++LS +KR A +A+ +K L+ L++NGN + +E
Sbjct: 173 RSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEE 232
Query: 485 GIDEVKEILK 494
G ++++E+L+
Sbjct: 233 GCEQLQEVLE 242
>CGD|CAL0000022 [details] [associations]
symbol:RNA1 species:5476 "Candida albicans" [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016072 "rRNA metabolic process" evidence=IEA]
[GO:0000054 "ribosomal subunit export from nucleus" evidence=IEA]
[GO:0006399 "tRNA metabolic process" evidence=IEA] [GO:0006407
"rRNA export from nucleus" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] [GO:0006404 "RNA import into nucleus" evidence=IEA]
[GO:0005098 "Ran GTPase activator activity" evidence=IEA]
InterPro:IPR027038 CGD:CAL0000022 EMBL:AACQ01000013 KO:K14319
PANTHER:PTHR24113 HOGENOM:HOG000195026 RefSeq:XP_721726.1
ProteinModelPortal:Q5AJS1 STRING:Q5AJS1 GeneID:3636595
KEGG:cal:CaO19.1649 Uniprot:Q5AJS1
Length = 414
Score = 179 (68.1 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 69/253 (27%), Positives = 111/253 (43%)
Query: 123 QTVFDISGGQRGFIEEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLIKD 182
+T + ISG Q F E + + LTE N ++ FS + G+ AS+ + L KD
Sbjct: 13 ETTYSISGKQLKFDSESDIAPYIKELTEKEN-VKKVDFSGNTIGIEASKALSEALLKHKD 71
Query: 183 QLTEVDLSDFIAGRPEEEALEVIN-MFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKS 241
+ E++ SD GR E + + + + L+ L+ +NLS NA G + + A L
Sbjct: 72 TIVEINFSDLYTGRLNTEIPQSLEYLLPALLKLPNLKLINLSDNAFGLQTIDPIEAYLAK 131
Query: 242 QNNLEELHLMNDGISEEAAQAI----LELIPST-----EKLKVLHFHNNMTGDEGAVAIS 292
++E L L N+G+ A I +L + E LK N + G+V
Sbjct: 132 AVSIEHLILSNNGMGPFAGSRIGGSLFKLAKAKKAEGKESLKTFICGRNRL-ENGSVNYL 190
Query: 293 EI-VKHSPALEDFRCSSTRIGAEGGIALAK-ALGQCTHLKKLDLRDNMFGVEAGVALSEV 350
+ +++ LE R I G L + L LK LDL+DN + ++E
Sbjct: 191 SVGLRNHKDLEVVRLYQNGIRPAGISKLVEQGLSNNKKLKVLDLQDNTITTRGAIHIAES 250
Query: 351 LPAFPDLTEVYLS 363
L +P L E+ L+
Sbjct: 251 LSNWPLLVELNLN 263
Score = 173 (66.0 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 85/348 (24%), Positives = 150/348 (43%)
Query: 213 EGSQLRYLNLSHNALGEKGVRAFG-ALLKSQNNLEELH---LMNDGISEEAAQAILELIP 268
E ++ ++ S N +G + +A ALLK ++ + E++ L ++ E Q++ L+P
Sbjct: 40 EKENVKKVDFSGNTIGIEASKALSEALLKHKDTIVEINFSDLYTGRLNTEIPQSLEYLLP 99
Query: 269 STEKL---KVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQ 325
+ KL K+++ +N G + I + + ++E S+ +G G + +L +
Sbjct: 100 ALLKLPNLKLINLSDNAFGLQTIDPIEAYLAKAVSIEHLILSNNGMGPFAGSRIGGSLFK 159
Query: 326 CTHLKKLDLRDNM--F--G---VEAGVA--LSEVLPAFPDLTEVYLSYXXXXXXXXXXXX 376
KK + ++++ F G +E G LS L DL V L
Sbjct: 160 LAKAKKAEGKESLKTFICGRNRLENGSVNYLSVGLRNHKDLEVVRLYQNGIRPAGISKLV 219
Query: 377 XXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSL 436
L+VLDL N IT L +LNL ++ L+++G++ + ++
Sbjct: 220 EQGLSNNKKLKVLDLQDNTITTRGAIHIAESLSNWPLLVELNLNDSLLKNKGSLKLVEAF 279
Query: 437 EEGHG--QLIEIDLSTNSMKRAGARLLAQVAVNK-PGLKMLNINGN-FIPD-EGIDEVKE 491
G QLI + L N ++ R+LA +K P LK L +NGN F D E ID++
Sbjct: 280 HAGDEKPQLITLKLQYNELETDSLRVLADAIASKLPQLKFLELNGNRFEEDSEHIDKING 339
Query: 492 ILKH----SLDVLGPLDENXXXXXXXXXXXXXXXXXIRNDLD-SKLKE 534
I + +D L L+E + DLD ++L+E
Sbjct: 340 IFEERGYGEIDELDELEELDSEEEEDDEDDEGEDDTLEEDLDLTQLEE 387
>ZFIN|ZDB-GENE-050208-711 [details] [associations]
symbol:si:ch211-213a13.5 "si:ch211-213a13.5"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-050208-711
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111 PROSITE:PS50837
OrthoDB:EOG4TTGHK GeneTree:ENSGT00690000101934 eggNOG:NOG257844
HOVERGEN:HBG092009 EMBL:BX248395 EMBL:BX664621 IPI:IPI00899095
Ensembl:ENSDART00000138646 Uniprot:F6NX52
Length = 3009
Score = 189 (71.6 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 88/336 (26%), Positives = 144/336 (42%)
Query: 179 LIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGAL 238
L+ D+ +++ + EE ++ + L S L+ L+LS LG+ G++ F L
Sbjct: 920 LLADKHCKINTLTLNSNNISEEDCHLLKAALN-LNPSNLKDLDLSKTNLGDSGMKIFSTL 978
Query: 239 LKSQN-NLEELHLMNDGISEEAAQAI---LELIPSTEKLKVLHFHNNMTGDEGAVAISEI 294
++Q LE+L+L I E A+ L PS K+K L N GD G IS +
Sbjct: 979 FENQQCRLEKLNLNGVSIGEAGCAALASAFNLNPS--KVKELDLSRNQLGDSGVTQISAL 1036
Query: 295 VKHSPA-LEDFRCSSTRIGAEGGIALAKAL-GQCTHLKKLDLRDNMFGVEAGVA-LSEVL 351
+++S L+ R S I EG ALA AL +HL +LDLR N G ++GV L+++L
Sbjct: 1037 LENSQCTLQILRMSDCSISEEGYKALASALRSNPSHLIELDLRGNDPG-QSGVKELTDLL 1095
Query: 352 PAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSL-EVLDLAGNDITXXXXXXXXXXXXX 410
P L + L + P L + L+L +
Sbjct: 1096 QD-P-LCKANLRFLSSAADHVCQFVKGIVGKNPLLLKKLNLNDRQLQDTTVKKLSVLLQD 1153
Query: 411 XQF-LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKP 469
++ L L + + +E ++ + L E++LS N + +G + NK
Sbjct: 1154 KHCKISTLTLNISNITEEDCAVLTSAFILNPSNLKELNLSGNKLGNSGISKFCPLLENKQ 1213
Query: 470 -GLKMLNINGNFIPDEGIDEVKEILKHSLDVLGPLD 504
GL+ L ++ I +EG + LK + L LD
Sbjct: 1214 CGLEKLRLSDCSISEEGYKALASALKSNPSHLIELD 1249
Score = 165 (63.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 86/377 (22%), Positives = 158/377 (41%)
Query: 94 KLMLEVIKRGPRTKEDGEEMIAEKATAASQTVFDISGGQRGFIEEEEAKLLLGPLTEPGN 153
KL L K P+ KE ++A+K + + + I EE+ LL L +
Sbjct: 902 KLNLSEHKLVPKLKELAP-LLADKHCKINTLTLNSNN-----ISEEDCHLLKAALNLNPS 955
Query: 154 SYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALE 213
+ + S + G ++ + + + +L +++L+ G E + + F+ L
Sbjct: 956 NLKDLDLSKTNLGDSGMKIFSTLFENQQCRLEKLNLNGVSIG--EAGCAALASAFN--LN 1011
Query: 214 GSQLRYLNLSHNALGEKGVRAFGALLK-SQNNLEELHLMNDGISEEAAQAILELIPSTEK 272
S+++ L+LS N LG+ GV ALL+ SQ L+ L + + ISEE +A+ + S
Sbjct: 1012 PSKVKELDLSRNQLGDSGVTQISALLENSQCTLQILRMSDCSISEEGYKALASALRSNPS 1071
Query: 273 -LKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKAL-GQCTHL- 329
L L N G G ++++++ + R S+ A+ K + G+ L
Sbjct: 1072 HLIELDLRGNDPGQSGVKELTDLLQDPLCKANLRFLSS--AADHVCQFVKGIVGKNPLLL 1129
Query: 330 KKLDLRDNMFGVEAGVALSEVLP-AFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEV 388
KKL+L D LS +L ++ + L+ +L+
Sbjct: 1130 KKLNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNITEEDCAVLTSAFILNPSNLKE 1189
Query: 389 LDLAGNDITXXXXXXXXXXXXXXQF-LTKLNLAENELQDEGAILIGKSLEEGHGQLIEID 447
L+L+GN + Q L KL L++ + +EG + +L+ LIE+D
Sbjct: 1190 LNLSGNKLGNSGISKFCPLLENKQCGLEKLRLSDCSISEEGYKALASALKSNPSHLIELD 1249
Query: 448 LSTNSMKRAGARLLAQV 464
L N ++G + L ++
Sbjct: 1250 LRGNDPGQSGVKELTEL 1266
Score = 161 (61.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 73/293 (24%), Positives = 126/293 (43%)
Query: 179 LIKDQLTEVD-LSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGA 237
L++D+ ++ L+ I+ EE+ + + F L S L+ LNLS N LG G+ F
Sbjct: 1150 LLQDKHCKISTLTLNISNITEEDCAVLTSAF--ILNPSNLKELNLSGNKLGNSGISKFCP 1207
Query: 238 LLKS-QNNLEELHLMNDGISEEAAQAILELIPSTEK-LKVLHFHNNMTGDEGAVAISEIV 295
LL++ Q LE+L L + ISEE +A+ + S L L N G G ++E++
Sbjct: 1208 LLENKQCGLEKLRLSDCSISEEGYKALASALKSNPSHLIELDLRGNDPGQSGVKELTELL 1267
Query: 296 KHSPALEDFRCSSTRIGAEGGIALAKAL-GQCTHL-KKLDLRDNMFGVEAGVALSEVLP- 352
+ R S+ A+ K + G+ L K+L+L D LS +L
Sbjct: 1268 QDPLCKAKLRFLSS--AADHVCQFVKGIVGKNPLLLKELNLNDRQLQDTTVKKLSVLLQD 1325
Query: 353 AFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQ 412
++ + L+ +L+ L+L+GN + Q
Sbjct: 1326 KHCKISTLTLNISNITEEDCAALTSAFILNPSNLKELNLSGNKLGNSGISKICPLLENKQ 1385
Query: 413 F-LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQV 464
L KL L++ + +EG + +L+ LIE+DL N ++G + L ++
Sbjct: 1386 CGLEKLRLSDCSISEEGYKALASALKSNPSHLIELDLRGNDPGQSGVKELTEL 1438
Score = 161 (61.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 82/345 (23%), Positives = 148/345 (42%)
Query: 137 EEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGR 196
EE+ A L + P N NK G S++ P+L + L ++ LSD
Sbjct: 1858 EEDCAALTSAFILNPSNLKELNLSGNKLGNSGISKIC-PLLENKQCGLEKLSLSDCSIS- 1915
Query: 197 PEEEALEVINMFSSALEG--SQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDG 254
EE + + +SAL+ S L L+L N G+ GV+ L + + + ++
Sbjct: 1916 --EEGYKAL---ASALKSNPSHLIELDLRGNDPGQSGVKELTDLSQYRCKTLTIRFLSGS 1970
Query: 255 ISEEAAQAILELIP-STEKLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIG 312
+EEA + +++ S L L + + D +S ++ S + +E + ++ +
Sbjct: 1971 GAEEACAHLTKVVGISPLLLTELDLNEDKLKDLDGEKLSALLMDSHSKVEKMKLNNCELT 2030
Query: 313 AEGGIALAKALGQCTHLKKLDLRDNMFGVEAGV-ALSEVLP-AFPDLTEVYLSYXXXXXX 370
+ LA L T+LK+L+L ++ +++GV + E L +L + LS
Sbjct: 2031 EKSCPVLAAVLSSKTNLKELNLNNSRL-LDSGVRVICEGLKNPVCELKILKLSKCNLTEE 2089
Query: 371 XXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAI 430
+ SL+ LDL+ N++ + L KLNL++ + +EG
Sbjct: 2090 SCSALASVLRSDSSSLKDLDLSNNNLQDSGVKLLTDGLKHSK-LEKLNLSDCSISEEGYK 2148
Query: 431 LIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLN 475
+ +L LIE+DL N ++G + L V +N LK L+
Sbjct: 2149 ALASALGSNPSHLIELDLRGNDPGQSGVQELTDVKLNNLTLKFLS 2193
Score = 157 (60.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 72/293 (24%), Positives = 125/293 (42%)
Query: 179 LIKDQLTEVD-LSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGA 237
L++D+ ++ L+ I+ EE+ + + F L S L+ LNLS N LG G+
Sbjct: 1494 LLQDKHCKISTLTLNISNITEEDCAVLTSAF--ILNPSNLKELNLSENKLGNSGISKICP 1551
Query: 238 LLKS-QNNLEELHLMNDGISEEAAQAILELIPSTEK-LKVLHFHNNMTGDEGAVAISEIV 295
LL++ Q LE+L L + ISEE +A+ + S L L N G G ++E++
Sbjct: 1552 LLENKQCGLEKLRLSDCSISEEGYKALASALKSNPSHLIELDLRGNDPGQSGVKELTELL 1611
Query: 296 KHSPALEDFRCSSTRIGAEGGIALAKAL-GQCTHL-KKLDLRDNMFGVEAGVALSEVLP- 352
+ R S+ A+ K + G+ L K+L+L D LS +L
Sbjct: 1612 QDPLCKAKLRFLSS--AADHVCQFVKGIVGKNPLLLKELNLNDRQLQDTTVKKLSVLLQD 1669
Query: 353 AFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQ 412
++ + L+ +L+ L+L+GN + Q
Sbjct: 1670 KHCKISTLTLNISNITEEDCAALTSAFILNPSNLKELNLSGNKLGNSGISKICPLLENKQ 1729
Query: 413 F-LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQV 464
L KL L++ + +EG + +L+ LIE+DL N ++G + L ++
Sbjct: 1730 CGLEKLRLSDCSISEEGYKALASALKSNPSHLIELDLRGNDPGQSGVKELTEL 1782
Score = 156 (60.0 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 84/340 (24%), Positives = 141/340 (41%)
Query: 176 ILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQ---LRYLNLSHNALGEKGV 232
+ L++D L + L F++ A + + F + G L+ LNL+ L + V
Sbjct: 1263 LTELLQDPLCKAKLR-FLSS-----AADHVCQFVKGIVGKNPLLLKELNLNDRQLQDTTV 1316
Query: 233 RAFGALLKSQN-NLEELHLMNDGISEEAAQAILE-LIPSTEKLKVLHFHNNMTGDEGAVA 290
+ LL+ ++ + L L I+EE A+ I + LK L+ N G+ G
Sbjct: 1317 KKLSVLLQDKHCKISTLTLNISNITEEDCAALTSAFILNPSNLKELNLSGNKLGNSGISK 1376
Query: 291 ISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKAL-GQCTHLKKLDLRDNMFGVEAGVA-L 347
I ++++ LE R S I EG ALA AL +HL +LDLR N G ++GV L
Sbjct: 1377 ICPLLENKQCGLEKLRLSDCSISEEGYKALASALKSNPSHLIELDLRGNDPG-QSGVKEL 1435
Query: 348 SEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSL-EVLDLAGNDITXXXXXXXXX 406
+E+L P L + L + P L + L+L +
Sbjct: 1436 TELLQD-P-LCKAKLRFLSSAADDVCQFVKGIVGKNPLLLKKLNLNDRQLQDTTVKKLSV 1493
Query: 407 XXXXXQF-LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVA 465
++ L L + + +E ++ + L E++LS N + +G + +
Sbjct: 1494 LLQDKHCKISTLTLNISNITEEDCAVLTSAFILNPSNLKELNLSENKLGNSGISKICPLL 1553
Query: 466 VNKP-GLKMLNINGNFIPDEGIDEVKEILKHSLDVLGPLD 504
NK GL+ L ++ I +EG + LK + L LD
Sbjct: 1554 ENKQCGLEKLRLSDCSISEEGYKALASALKSNPSHLIELD 1593
Score = 154 (59.3 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 82/375 (21%), Positives = 153/375 (40%)
Query: 171 RVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGE- 229
+ A L+ L E+DL G + E+ + L ++LR+L+ + + + +
Sbjct: 1748 KALASALKSNPSHLIELDLRGNDPG--QSGVKELTELLQDPLCKAKLRFLSSAADDVCQF 1805
Query: 230 -KGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTE-KLKVLHFH-NNMTGDE 286
KG+ LL L+EL+L + + + + + L+ K+ L + +N+T ++
Sbjct: 1806 VKGIVGKNPLL-----LKELNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNITEED 1860
Query: 287 GAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALG--QCTHLKKLDLRDNMFGVEAG 344
A S + + L++ S ++G G + L QC L+KL L D E
Sbjct: 1861 CAALTSAFILNPSNLKELNLSGNKLGNSGISKICPLLENKQCG-LEKLSLSDCSISEEGY 1919
Query: 345 VALSEVLPAFPD-LTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXX 403
AL+ L + P L E+ L +L + L+G+
Sbjct: 1920 KALASALKSNPSHLIELDLRGNDPGQSGVKELTDLSQYRCKTLTIRFLSGSGAEEACAHL 1979
Query: 404 XXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQ 463
LT+L+L E++L+D + L + H ++ ++ L+ + +LA
Sbjct: 1980 TKVVGISPLLLTELDLNEDKLKDLDGEKLSALLMDSHSKVEKMKLNNCELTEKSCPVLAA 2039
Query: 464 VAVNKPGLKMLNINGNFIPDEGIDEVKEILKHSLDVLGPLDENXXXXXXXXXXXXXXXXX 523
V +K LK LN+N + + D G+ + E LK+ + L L
Sbjct: 2040 VLSSKTNLKELNLNNSRLLDSGVRVICEGLKNPVCELKIL--KLSKCNLTEESCSALASV 2097
Query: 524 IRNDLDSKLKELHIN 538
+R+D S LK+L ++
Sbjct: 2098 LRSD-SSSLKDLDLS 2111
Score = 142 (55.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 96/430 (22%), Positives = 169/430 (39%)
Query: 81 GSSSVQIYAK--ESSKLMLEVIK-RGPRTKEDGEEMIAEKATAASQTV--FDISGGQRGF 135
G S ++I++ E+ + LE + G E G +A V D+S Q G
Sbjct: 968 GDSGMKIFSTLFENQQCRLEKLNLNGVSIGEAGCAALASAFNLNPSKVKELDLSRNQLG- 1026
Query: 136 IEEEEAKLLLGPLTEPGNSYTRIC-FSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIA 194
+ + L E +I S+ S + A LR L E+DL
Sbjct: 1027 ---DSGVTQISALLENSQCTLQILRMSDCSISEEGYKALASALRSNPSHLIELDLRGNDP 1083
Query: 195 GRPEEEALEVINMFSSALEGSQLRYLNLS--HNALGEKGVRAFGALLKSQNNLEELHLMN 252
G + E+ ++ L + LR+L+ + H KG+ LL + NL + L +
Sbjct: 1084 G--QSGVKELTDLLQDPLCKANLRFLSSAADHVCQFVKGIVGKNPLLLKKLNLNDRQLQD 1141
Query: 253 DGISEEAAQAILELIPSTEKLKVLHFH-NNMTGDEGAVAISEIVKHSPALEDFRCSSTRI 311
+ + +L+ K+ L + +N+T ++ AV S + + L++ S ++
Sbjct: 1142 TTVKK--LSVLLQ--DKHCKISTLTLNISNITEEDCAVLTSAFILNPSNLKELNLSGNKL 1197
Query: 312 GAEGGIALAKALG--QCTHLKKLDLRDNMFGVEAGVALSEVLPAFPD-LTEVYL--SYXX 366
G G L QC L+KL L D E AL+ L + P L E+ L +
Sbjct: 1198 GNSGISKFCPLLENKQCG-LEKLRLSDCSISEEGYKALASALKSNPSHLIELDLRGNDPG 1256
Query: 367 XXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQD 426
C L L A + + L +LNL + +LQD
Sbjct: 1257 QSGVKELTELLQDPLCKAKLRFLSSAADHVCQFVKGIVGKNPL---LLKELNLNDRQLQD 1313
Query: 427 EGAILIGKSLEEGHGQLIEIDLS-TNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEG 485
+ L++ H ++ + L+ +N + A L + +N LK LN++GN + + G
Sbjct: 1314 TTVKKLSVLLQDKHCKISTLTLNISNITEEDCAALTSAFILNPSNLKELNLSGNKLGNSG 1373
Query: 486 IDEVKEILKH 495
I ++ +L++
Sbjct: 1374 ISKICPLLEN 1383
Score = 135 (52.6 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 74/334 (22%), Positives = 139/334 (41%)
Query: 171 RVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGE- 229
+ A L+ L E+DL G + E+ + L ++LR+L+ + + + +
Sbjct: 1404 KALASALKSNPSHLIELDLRGNDPG--QSGVKELTELLQDPLCKAKLRFLSSAADDVCQF 1461
Query: 230 -KGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH-NNMTGDEG 287
KG+ LL + NL + L + + + +L+ K+ L + +N+T ++
Sbjct: 1462 VKGIVGKNPLLLKKLNLNDRQLQDTTVKK--LSVLLQ--DKHCKISTLTLNISNITEEDC 1517
Query: 288 AVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALG--QCTHLKKLDLRDNMFGVEAGV 345
AV S + + L++ S ++G G + L QC L+KL L D E
Sbjct: 1518 AVLTSAFILNPSNLKELNLSENKLGNSGISKICPLLENKQCG-LEKLRLSDCSISEEGYK 1576
Query: 346 ALSEVLPAFPD-LTEVYL--SYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXX 402
AL+ L + P L E+ L + C L L A + +
Sbjct: 1577 ALASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLRFLSSAADHVCQFVKG 1636
Query: 403 XXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLS-TNSMKRAGARLL 461
L +LNL + +LQD + L++ H ++ + L+ +N + A L
Sbjct: 1637 IVGKNPL---LLKELNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNITEEDCAALT 1693
Query: 462 AQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKH 495
+ +N LK LN++GN + + GI ++ +L++
Sbjct: 1694 SAFILNPSNLKELNLSGNKLGNSGISKICPLLEN 1727
Score = 128 (50.1 bits), Expect = 0.00052, P = 0.00052
Identities = 75/330 (22%), Positives = 129/330 (39%)
Query: 174 APILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVR 233
A +LR L ++DLS+ ++ ++++ S L+ S+L L+LS ++ E G +
Sbjct: 778 ASVLRSDSSSLKDLDLSN---NNLQDSGVKLL---SDGLKHSKLEKLSLSDCSISEDGYK 831
Query: 234 AFGALLKSQ-NNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAIS 292
A + LKS ++L EL L + + + +L++ L F + ++
Sbjct: 832 ALASALKSNPSHLIELDLRGNDPGQSGVKELLDVRQELNHNLQLRFLGP-DAQKAFTDLT 890
Query: 293 EIVKHSPAL-EDFRCSSTRIGAE-GGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEV 350
I+ +P L S ++ + +A A C + L L N E L
Sbjct: 891 NILNENPLLLRKLNLSEHKLVPKLKELAPLLADKHCK-INTLTLNSNNISEEDCHLLKAA 949
Query: 351 LPAFP-DLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXX 409
L P +L ++ LS LE L+L G I
Sbjct: 950 LNLNPSNLKDLDLSKTNLGDSGMKIFSTLFENQQCRLEKLNLNGVSIGEAGCAALASAFN 1009
Query: 410 XXQFLTK-LNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNK 468
K L+L+ N+L D G I LE L + +S S+ G + LA +
Sbjct: 1010 LNPSKVKELDLSRNQLGDSGVTQISALLENSQCTLQILRMSDCSISEEGYKALASALRSN 1069
Query: 469 PG-LKMLNINGNFIPDEGIDEVKEILKHSL 497
P L L++ GN G+ E+ ++L+ L
Sbjct: 1070 PSHLIELDLRGNDPGQSGVKELTDLLQDPL 1099
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 443 LIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
L E+DLS N+++ + +L+ + + LK+
Sbjct: 2961 LKELDLSNNNLEDSEKKLIDAMQDSTCNLKL 2991
>TAIR|locus:2036736 [details] [associations]
symbol:WPP2 "AT1G47200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005640 "nuclear outer membrane"
evidence=IDA] [GO:0007067 "mitosis" evidence=RCA;IMP] [GO:0048527
"lateral root development" evidence=RCA;IMP] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006913 "nucleocytoplasmic transport" evidence=RCA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886
GO:GO:0005794 GO:GO:0007067 GO:GO:0048527 EMBL:AC083835
GO:GO:0005640 EMBL:AC079677 InterPro:IPR025265 Pfam:PF13943
HOGENOM:HOG000239842 ProtClustDB:CLSN2686648 EMBL:AY072148
EMBL:AY096476 EMBL:AY085683 IPI:IPI00529353 PIR:F96512
RefSeq:NP_564498.1 UniGene:At.17221 IntAct:Q9C500 STRING:Q9C500
PaxDb:Q9C500 PRIDE:Q9C500 EnsemblPlants:AT1G47200.1 GeneID:841123
KEGG:ath:AT1G47200 TAIR:At1g47200 eggNOG:NOG262975
InParanoid:Q9C500 OMA:EVSKDDA PhylomeDB:Q9C500
Genevestigator:Q9C500 Uniprot:Q9C500
Length = 180
Score = 153 (58.9 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 39/130 (30%), Positives = 65/130 (50%)
Query: 13 LSVKLWPPSQSTRLMLVQRMTKNLTTPSIFSRKYGLLSXXXXXXXXXXXXXLAFAAANQH 72
+S+++WPP+Q TR ++ R+ + L+T SI S++YG L A+ A+
Sbjct: 56 ISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVASNA 115
Query: 73 YEKEPDGDGSSSVQIYAKESSKLMLEVIKRGPRTKEDGEEMIAEKATAASQTVFDISGGQ 132
D DG +++Y+KE SK MLE +K G + + T AS+ D +G
Sbjct: 116 VSS--DDDGIKILELYSKEISKRMLESVKARSNASV-GNGSVEDANTDASEVSKDDAGPA 172
Query: 133 RGFIEEEEAK 142
EEE+++
Sbjct: 173 S---EEEKSE 179
>UNIPROTKB|F8W7I9 [details] [associations]
symbol:RANGAP1 "Ran GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
GO:GO:0007165 EMBL:AL035681 GO:GO:0032853 GO:GO:0005098
PANTHER:PTHR24113 HGNC:HGNC:9854 ChiTaRS:RANGAP1 Gene3D:1.25.40.200
SUPFAM:SSF69099 EMBL:AL035659 IPI:IPI00879681
ProteinModelPortal:F8W7I9 SMR:F8W7I9 PRIDE:F8W7I9
Ensembl:ENST00000407260 UCSC:uc011aoz.2 ArrayExpress:F8W7I9
Bgee:F8W7I9 Uniprot:F8W7I9
Length = 532
Score = 175 (66.7 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 68/252 (26%), Positives = 105/252 (41%)
Query: 150 EPGNSYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFS 209
E +S + + G+ A+RV A L K +L SD GR E +
Sbjct: 36 EDFDSLEALRLEGNTVGVEAARVIAKALEK-KSELKRCHWSDMFTGRLRTEIPPALISLG 94
Query: 210 SAL--EGSQLRYLNLSHNALGEKGVRAFGALLKSQN--NLEELHLMNDGISEEAAQAILE 265
L G+QL L+LS NA G GV+ F ALLKS L+EL L N G+ + I
Sbjct: 95 EGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKVI-- 152
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQ 325
T L+ +H N G A+++ +P L + +G +A+A+ L
Sbjct: 153 ---GT--LEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKT 207
Query: 326 CTHLKKLDLRDNMFGVEAGVALSEVLPA-FPDLTEVYLSYXXXXXXXXXXXXXXXXXCAP 384
++ ++ D + + VA+++ + P L E+ LS+ A
Sbjct: 208 LRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKA- 266
Query: 385 SLEVLDLAGNDI 396
LE LDL GN +
Sbjct: 267 ELEKLDLNGNTL 278
Score = 166 (63.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 63/276 (22%), Positives = 121/276 (43%)
Query: 243 NNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTG------DEGAVAISE-IV 295
++LE L L + + EAA+ I + + +LK H+ + TG +++ E ++
Sbjct: 39 DSLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLI 98
Query: 296 KHSPALEDFRCSSTRIGAEG--GI-ALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLP 352
L + S G +G G AL K+ C L++L L + G+ G +
Sbjct: 99 TAGAQLVELDLSDNAFGPDGVQGFEALLKS-SACFTLQELKLNNCGMGIGGGKVIGT--- 154
Query: 353 AFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQ 412
L EV++ P L V++L N T +
Sbjct: 155 ----LEEVHMPQNGINHPGITALAQAFAV-NPLLRVINLNDNTFTEKGAVAMAETLKTLR 209
Query: 413 FLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLK 472
+ +N + ++ +GA+ I ++ G +L E++LS +KR A +A+ +K L+
Sbjct: 210 QVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELE 269
Query: 473 MLNINGNFIPDEGIDEVKEILK--HSLDVLGPLDEN 506
L++NGN + +EG ++++E+L+ + VL L ++
Sbjct: 270 KLDLNGNTLGEEGCEQLQEVLEGFNMAKVLASLSDD 305
Score = 155 (59.6 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 39/148 (26%), Positives = 76/148 (51%)
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVL 276
L +++ N + G+ A L ++L ++ +E+ A A+ E + + +++V+
Sbjct: 155 LEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVI 214
Query: 277 HFHNNMTGDEGAVAISEIVKHS-PALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLR 335
+F + + +GAVAI++ ++ P L++ S I + +A+A+A+ L+KLDL
Sbjct: 215 NFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLN 274
Query: 336 DNMFGVEAGVALSEVLPAFPDLTEVYLS 363
N G E L EVL F ++ +V S
Sbjct: 275 GNTLGEEGCEQLQEVLEGF-NMAKVLAS 301
>UNIPROTKB|Q86WI3 [details] [associations]
symbol:NLRC5 "Protein NLRC5" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060335 "positive regulation of
interferon-gamma-mediated signaling pathway" evidence=IMP;IDA]
[GO:0060340 "positive regulation of type I interferon-mediated
signaling pathway" evidence=IDA] [GO:0045087 "innate immune
response" evidence=IMP;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0060339 "negative regulation of type I
interferon-mediated signaling pathway" evidence=IDA] [GO:0051607
"defense response to virus" evidence=IEP] [GO:0043549 "regulation
of kinase activity" evidence=IDA] [GO:0032088 "negative regulation
of NF-kappaB transcription factor activity" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0032480 "negative
regulation of type I interferon production" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=IDA] [GO:0000979 "RNA polymerase II
core promoter sequence-specific DNA binding" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 Reactome:REACT_6900 GO:GO:0045944 GO:GO:0045087
GO:GO:0051607 GO:GO:0032088 InterPro:IPR025875 Pfam:PF12799
GO:GO:0000979 GO:GO:0032480 GO:GO:0043549 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0045345 GO:GO:0060339 GO:GO:0060340
GO:GO:0060335 HSSP:P10775 eggNOG:NOG265451 EMBL:AF389420
EMBL:EF452236 EMBL:AK074133 EMBL:AK074182 EMBL:AC009090
EMBL:AC023825 EMBL:AK090439 EMBL:BC050527 EMBL:BC063566
EMBL:AK027414 EMBL:AK027416 IPI:IPI00329085 IPI:IPI00383061
IPI:IPI00641739 IPI:IPI00647281 IPI:IPI00789837 IPI:IPI00854610
RefSeq:NP_115582.4 UniGene:Hs.528836 ProteinModelPortal:Q86WI3
SMR:Q86WI3 IntAct:Q86WI3 STRING:Q86WI3 DMDM:269849666 PaxDb:Q86WI3
PRIDE:Q86WI3 DNASU:84166 Ensembl:ENST00000262510
Ensembl:ENST00000308149 Ensembl:ENST00000436936
Ensembl:ENST00000539144 Ensembl:ENST00000539881 GeneID:84166
KEGG:hsa:84166 UCSC:uc021tit.1 UCSC:uc021tiu.1 CTD:84166
GeneCards:GC16P057023 HGNC:HGNC:29933 MIM:613537 neXtProt:NX_Q86WI3
PharmGKB:PA162397694 HOVERGEN:HBG108194 InParanoid:Q86WI3
OMA:EILLSWN OrthoDB:EOG4Z0B4Q PhylomeDB:Q86WI3 ChiTaRS:NLRC5
GenomeRNAi:84166 NextBio:73516 ArrayExpress:Q86WI3 Bgee:Q86WI3
CleanEx:HS_NLRC5 Genevestigator:Q86WI3 Uniprot:Q86WI3
Length = 1866
Score = 188 (71.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 65/274 (23%), Positives = 114/274 (41%)
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVL 276
L+ L L+ N++G+ G L++ +LEEL L ++ I + Q + ++P +L+ +
Sbjct: 1580 LQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKI 1639
Query: 277 HFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRD 336
N G V ++E + LE+ +G + LA+ L Q HL+ L L
Sbjct: 1640 DLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ--HLRVLHLPF 1697
Query: 337 NMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDI 396
+ G ++L++ L P L E+ L+ P L +DL I
Sbjct: 1698 SHLGPGGALSLAQALDGSPHLEEISLAENNLAGGVLRFCMEL-----PLLRQIDLVSCKI 1752
Query: 397 TXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRA 456
L + L+ N L DE A + + L + G+L +DL N +
Sbjct: 1753 DNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQ-MGRLKRVDLEKNQITAL 1811
Query: 457 GARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVK 490
GA LLA+ ++++ + N IP + +K
Sbjct: 1812 GAWLLAEGLAQGSSIQVIRLWNNPIPCDMAQHLK 1845
Score = 182 (69.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 70/280 (25%), Positives = 123/280 (43%)
Query: 198 EEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISE 257
E++ + + S L S+L+ L+ + + +G+ + L ++LEEL L N+ E
Sbjct: 1477 EDDDASSLLLQSLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDE 1536
Query: 258 EAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGI 317
E +A++ + LK L + + ++ + L+ R + IG G
Sbjct: 1537 EGTKALMRALEGKWMLKRLDLSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCC 1596
Query: 318 ALAKALGQCTHLKKLDLRDNMFGVEAGVA-LSEVLPAFPDLTEVYLSYXXXXXXXXXXXX 376
L++AL T L++LDL N G +AGV L+ +LP P+L ++ LS
Sbjct: 1597 HLSEALRAATSLEELDLSHNQIG-DAGVQHLATILPGLPELRKIDLSGNSISSAGGVQLA 1655
Query: 377 XXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSL 436
C LE L L N + Q L L+L + L GA+ + ++L
Sbjct: 1656 ESLVLCR-RLEELMLGCNAL--GDPTALGLAQELPQHLRVLHLPFSHLGPGGALSLAQAL 1712
Query: 437 EEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNI 476
+ G L EI L+ N++ AG L + + P L+ +++
Sbjct: 1713 D-GSPHLEEISLAENNL--AGGVL--RFCMELPLLRQIDL 1747
Score = 172 (65.6 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 68/277 (24%), Positives = 113/277 (40%)
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVL 276
L L+LS+N E+G +A L+ + L+ L L + ++ + + L+ L
Sbjct: 1524 LEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLALLTHRLSQMTCLQSL 1583
Query: 277 HFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRD 336
+ N GD G +SE ++ + +LE+ S +IG G LA L L+K+DL
Sbjct: 1584 RLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDLSG 1643
Query: 337 NMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDI 396
N GV L+E L L E+ L L VL L + +
Sbjct: 1644 NSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQEL---PQHLRVLHLPFSHL 1700
Query: 397 TXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRA 456
L +++LAEN L G + L L +IDL + +
Sbjct: 1701 GPGGALSLAQALDGSPHLEEISLAENNLAG-GVLRFCMELP----LLRQIDLVSCKIDNQ 1755
Query: 457 GARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEIL 493
A+LL + P L+++ ++ N + DE E+ ++L
Sbjct: 1756 TAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVL 1792
Score = 155 (59.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 65/240 (27%), Positives = 103/240 (42%)
Query: 265 ELIPSTEKLKVLHFHN-NMTGDEGA--VAISEIVKHSPALEDFRCSSTRIGAEGGIALAK 321
+L+ + +L+ L N+ D+ A + + ++ L+ FR +S+ + EG LA
Sbjct: 1457 QLMETCARLQQLSLSQVNLCEDDDASSLLLQSLLLSLSELKTFRLTSSCVSTEGLAHLAS 1516
Query: 322 ALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXX 381
LG C HL++LDL +N F E AL L L + LS+
Sbjct: 1517 GLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLALLTHRLSQ 1576
Query: 382 CAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHG 441
L+ L L N I L +L+L+ N++ D G + L G
Sbjct: 1577 MT-CLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILP-GLP 1634
Query: 442 QLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDE-GIDEVKEILKHSLDVL 500
+L +IDLS NS+ AG LA+ V L+ L + N + D + +E+ +H L VL
Sbjct: 1635 ELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQH-LRVL 1693
Score = 139 (54.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 69/283 (24%), Positives = 115/283 (40%)
Query: 184 LTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQN 243
+TE+ +S+ ++ L V F E + L L+H LG G L+++
Sbjct: 1410 VTEISISE------TQQQLCVQLEFPRQEENPEAVALRLAHCDLGAHHSLLVGQLMETCA 1463
Query: 244 NLEELHLMNDGISEE--AAQAILE-LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA 300
L++L L + E+ A+ +L+ L+ S +LK ++ EG ++ + H
Sbjct: 1464 RLQQLSLSQVNLCEDDDASSLLLQSLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCHH 1523
Query: 301 LEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEV 360
LE+ S+ + EG AL +AL LK+LDL + L+ L L +
Sbjct: 1524 LEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLALLTHRLSQMTCLQSL 1583
Query: 361 YLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLA 420
L+ A SLE LDL+ N I L K++L+
Sbjct: 1584 RLN-RNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDLS 1642
Query: 421 ENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQ 463
N + G + + +SL +L E+ L N++ A LAQ
Sbjct: 1643 GNSISSAGGVQLAESLVLCR-RLEELMLGCNALGDPTALGLAQ 1684
Score = 43 (20.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 89 AKESSKLMLEVIKRGPRTKEDGEEMIAEKATAASQTVFDISG-----GQRGFIEEEEAKL 143
++ES+ +LE + PR +E + +E++ + D +G + F E ++L
Sbjct: 1284 SQESALYLLETLPSCPRVREASVNLGSEQSFRIHFSREDQAGKTLRLSECSFRPEHVSRL 1343
Query: 144 LLG-----PLTEPGNSYTRICFSNKSFGLGASRVAAP 175
G LTE + T+ C K + S V P
Sbjct: 1344 ATGLSKSLQLTEL--TLTQCCLGQKQLAILLSLVGRP 1378
>UNIPROTKB|E1B9F2 [details] [associations]
symbol:E1B9F2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060340 "positive regulation of type I
interferon-mediated signaling pathway" evidence=IEA] [GO:0060339
"negative regulation of type I interferon-mediated signaling
pathway" evidence=IEA] [GO:0060335 "positive regulation of
interferon-gamma-mediated signaling pathway" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045345 "positive regulation of MHC
class I biosynthetic process" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0043549 "regulation of kinase
activity" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003593 PROSITE:PS51450 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0045944
GO:GO:0045087 GO:GO:0051607 GO:GO:0017111 GO:GO:0032088
GO:GO:0000979 GO:GO:0043549 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0045345 GO:GO:0060339 GO:GO:0060340 GO:GO:0060335 OMA:EILLSWN
GeneTree:ENSGT00660000095240 EMBL:DAAA02046507 IPI:IPI00701505
Ensembl:ENSBTAT00000007129 Uniprot:E1B9F2
Length = 1916
Score = 179 (68.1 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 66/272 (24%), Positives = 113/272 (41%)
Query: 213 EGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEK 272
E S + +LS + + + G L++ +LEEL L ++ I AQ + ++P +
Sbjct: 1625 EASWPCFSSLSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNIGAQDLAAVLPGLPE 1684
Query: 273 LKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
L+ + N G G ++E + LE+ +G + LAK L Q HL+ L
Sbjct: 1685 LRKIDLSANGIGPAGGARLAESLTLCRHLEELMLGCNALGDCTALGLAKGLPQ--HLRVL 1742
Query: 333 DLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLA 392
L + E ++L + L P + E+ L+ P L LDL
Sbjct: 1743 HLPSSHLSPEGVLSLGQALDGCPHVEEISLAENSLAGGVPHFHQGF-----PVLRKLDLV 1797
Query: 393 GNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNS 452
+I L ++ L+ N L DE A + + L + G+L +DL N
Sbjct: 1798 SCEIDNQTAKPLAASFVLCLALEEITLSWNLLGDEAAAELARVLPQ-MGRLKRMDLEKNQ 1856
Query: 453 MKRAGARLLAQVAVNKPGLKMLNINGNFIPDE 484
+ GA LLA+ G++++ + N IP +
Sbjct: 1857 ITAYGAWLLAEGLAQGSGIQVIRLWNNRIPPD 1888
>ZFIN|ZDB-GENE-060929-492 [details] [associations]
symbol:rangap1a "RAN GTPase activating protein 1a"
species:7955 "Danio rerio" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
ZFIN:ZDB-GENE-060929-492 GO:GO:0007165 GO:GO:0032853 eggNOG:COG5238
KO:K14319 GeneTree:ENSGT00440000039203 GO:GO:0005098
PANTHER:PTHR24113 HOGENOM:HOG000195026 HOVERGEN:HBG017720
OMA:SFNSNAF OrthoDB:EOG4K0QN7 Gene3D:1.25.40.200 SUPFAM:SSF69099
EMBL:CR774195 EMBL:CU633617 EMBL:CU655966 EMBL:BC124540
IPI:IPI00803875 RefSeq:NP_001070084.1 UniGene:Dr.82553 SMR:Q08BV5
STRING:Q08BV5 Ensembl:ENSDART00000088610 GeneID:767677
KEGG:dre:767677 CTD:767677 NextBio:20918068 Uniprot:Q08BV5
Length = 570
Score = 171 (65.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 60/255 (23%), Positives = 109/255 (42%)
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA--LEDFRCSSTRIGAEGGIALAKAL 323
LI + +LKVL +N G +G I +++K + L++ R ++ +G GG LA AL
Sbjct: 107 LILAGARLKVLDLSDNAFGPDGVKGIEKLLKSAACHTLQELRLNNCGMGIGGGKILAAAL 166
Query: 324 GQCTH----------LKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXX 373
+C LK N + AL++ L EV++
Sbjct: 167 SECHQQSSALGAPFKLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHMPQNGINYPGVT 226
Query: 374 XXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIG 433
P L VL+L N T + + +N + ++ EGA +
Sbjct: 227 ALATAMQH-NPQLRVLNLNDNTFTKKGAMAMAQALKHLRNVQVINFGDCLVRSEGASALA 285
Query: 434 KSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEIL 493
+++ EG L E++LS + A +AQ +K + L++NGN + ++G +K+++
Sbjct: 286 ETVREGLPILKELNLSFGEIMEEAALEVAQSVQHKDQFEKLDLNGNSLGEDGCKSLKQLM 345
Query: 494 K--HSLDVLGPLDEN 506
+ + D LG L ++
Sbjct: 346 ESINMADKLGSLSDD 360
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 72/288 (25%), Positives = 117/288 (40%)
Query: 164 SFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSAL--EGSQLRYLN 221
+ G+ A++ A L K L SD GR E + AL G++L+ L+
Sbjct: 60 TIGVEAAQTIAKALEN-KSDLQCCHWSDMFTGRLRAEIPPALVSLGDALILAGARLKVLD 118
Query: 222 LSHNALGEKGVRAFGALLKSQ--NNLEELHLMNDGIS----EEAAQAILELIPSTE---- 271
LS NA G GV+ LLKS + L+EL L N G+ + A A+ E +
Sbjct: 119 LSDNAFGPDGVKGIEKLLKSAACHTLQELRLNNCGMGIGGGKILAAALSECHQQSSALGA 178
Query: 272 --KLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHL 329
KLKV N ++GA A+++ + +LE+ I G ALA A+ L
Sbjct: 179 PFKLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHMPQNGINYPGVTALATAMQHNPQL 238
Query: 330 KKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVL 389
+ L+L DN F + +A+++ L ++ + P L+ L
Sbjct: 239 RVLNLNDNTFTKKGAMAMAQALKHLRNVQVINFGDCLVRSEGASALAETVREGLPILKEL 298
Query: 390 DLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLE 437
+L+ +I KL+L N L ++G + + +E
Sbjct: 299 NLSFGEIMEEAALEVAQSVQHKDQFEKLDLNGNSLGEDGCKSLKQLME 346
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 49/199 (24%), Positives = 93/199 (46%)
Query: 161 SNKSFGLGASRVAAPILRLIKDQLTEVD----LSDFIAGRPEEE---ALEVINMFSSALE 213
+N G+G ++ A L Q + + L FIAGR E A + F L
Sbjct: 150 NNCGMGIGGGKILAAALSECHQQSSALGAPFKLKVFIAGRNRLENDGATALAQAFQ--LM 207
Query: 214 GSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKL 273
GS L +++ N + GV A ++ L L+L ++ +++ A A+ + + +
Sbjct: 208 GS-LEEVHMPQNGINYPGVTALATAMQHNPQLRVLNLNDNTFTKKGAMAMAQALKHLRNV 266
Query: 274 KVLHFHNNMTGDEGAVAISEIVKHS-PALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
+V++F + + EGA A++E V+ P L++ S I E + +A+++ +KL
Sbjct: 267 QVINFGDCLVRSEGASALAETVREGLPILKELNLSFGEIMEEAALEVAQSVQHKDQFEKL 326
Query: 333 DLRDNMFGVEAGVALSEVL 351
DL N G + +L +++
Sbjct: 327 DLNGNSLGEDGCKSLKQLM 345
>RGD|1310380 [details] [associations]
symbol:Rangap1 "RAN GTPase activating protein 1" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR027038 RGD:1310380 eggNOG:COG5238 PANTHER:PTHR24113
HOGENOM:HOG000195026 HOVERGEN:HBG017720 OrthoDB:EOG4K0QN7
IPI:IPI00471774 EMBL:BC082056 UniGene:Rn.107099
ProteinModelPortal:Q66H32 STRING:Q66H32 PRIDE:Q66H32
InParanoid:Q66H32 NextBio:681949 ArrayExpress:Q66H32
Genevestigator:Q66H32 Uniprot:Q66H32
Length = 431
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 59/241 (24%), Positives = 107/241 (44%)
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA---LEDFRCSSTRIGAEGGIALAKA 322
LI + +L L +N G +G ++K SPA L++ + ++ +G GG LA A
Sbjct: 107 LITAGAQLVELDLSDNAFGPDGVRGFEALLK-SPACFTLQELKLNNCGMGIGGGKILAAA 165
Query: 323 LGQCTHL-----KKLDLR-----DNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXX 372
L +C K L L+ N + AL+E L EV++
Sbjct: 166 LTECHRKSSAQGKPLTLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGV 225
Query: 373 XXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILI 432
P L V++L N T + + +N + ++ +GA+ I
Sbjct: 226 TALAQAFAI-NPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAI 284
Query: 433 GKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEI 492
++ G +L E++LS +KR A ++A+ +K L+ L++NGN + +EG ++++E+
Sbjct: 285 ADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEV 344
Query: 493 L 493
L
Sbjct: 345 L 345
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 67/262 (25%), Positives = 118/262 (45%)
Query: 110 GEEMIAEKATAASQTVFDISGGQRGFIEEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGA 169
GE +I A + D + G G + EA LL P + + +N G+G
Sbjct: 104 GEGLITAGAQLVELDLSDNAFGPDG-VRGFEA-LLKSPACF---TLQELKLNNCGMGIGG 158
Query: 170 SRVAAPIL----RLIKDQLTEVDLSDFIAGRPEEE---ALEVINMFSSALEGSQLRYLNL 222
++ A L R Q + L F+AGR E A + F + G+ L +++
Sbjct: 159 GKILAAALTECHRKSSAQGKPLTLKVFVAGRNRLENDGATALAEAFG--IIGT-LEEVHM 215
Query: 223 SHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNM 282
N + GV A L ++L ++ +E+ A+ E + + +++V++F + +
Sbjct: 216 PQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCL 275
Query: 283 TGDEGAVAISEIVKHS-PALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGV 341
+GAVAI++ V+ P L++ S I + + +A+A+ L+KLDL N G
Sbjct: 276 VRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGE 335
Query: 342 EAGVALSEVLPAFPDLTEVYLS 363
E L EVL +F ++ +V S
Sbjct: 336 EGCEQLQEVLDSF-NMAKVLAS 356
>WB|WBGene00004303 [details] [associations]
symbol:ran-2 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
InterPro:IPR027038 GO:GO:0005634 GO:GO:0009792 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0005096 GO:GO:0043547
GO:GO:0000003 EMBL:FO080706 eggNOG:COG5238 KO:K14319
GeneTree:ENSGT00440000039203 PANTHER:PTHR24113 PIR:S44770
RefSeq:NP_741232.1 RefSeq:NP_741233.2 ProteinModelPortal:P34342
SMR:P34342 IntAct:P34342 STRING:P34342 PaxDb:P34342 PRIDE:P34342
EnsemblMetazoa:C29E4.3a GeneID:176115 KEGG:cel:CELE_C29E4.3
UCSC:C29E4.3a CTD:176115 WormBase:C29E4.3a WormBase:C29E4.3b
HOGENOM:HOG000019607 InParanoid:P34342 OMA:NNIVAQC NextBio:891178
Uniprot:P34342
Length = 960
Score = 154 (59.3 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 66/235 (28%), Positives = 107/235 (45%)
Query: 130 GGQRGFIEEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDL 189
G Q EEE ++ + + N + F + + A ++ A L+ + +L E
Sbjct: 48 GKQLKLDTEEEISKVIDQIRKHLNLEV-LDFRGNTLSVLAGKLIAESLKT-RRELKECIW 105
Query: 190 SDFIAGRPEEEALEVINMFSSAL--EGSQLRYLNLSHNALGEKGVRAFGALLKSQN--NL 245
SD GR ++E V++ AL G +L L+LS NA G + L+S +L
Sbjct: 106 SDMFTGRLKDEIPLVLDALGEALTASGCRLTTLDLSDNAFGAGLSTSLYNFLQSPALYSL 165
Query: 246 EELHLMNDGIS---EEAAQAILELIPSTEK----LKVLHF--HNNMTGDEGAVAISEIVK 296
E L L N+G+ + +A+ LI +++K LK+ F N E +A+S+
Sbjct: 166 ENLILNNNGLGLAGKTVGKALCSLIDASKKAGTPLKLKKFVCGRNRLEVESTIALSDAFI 225
Query: 297 HSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVL 351
LE+ R I +G IALA+A L+ +D+ DN E + +SEVL
Sbjct: 226 KLGTLEEIRLPQNGIRDDGIIALAEAFRMNKKLRIIDINDNFCCPEGAIQISEVL 280
Score = 140 (54.3 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 61/215 (28%), Positives = 97/215 (45%)
Query: 164 SFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSAL--EGSQLRYLN 221
+ G+ A V A L +L SD GR + E ++ A+ G +++ L+
Sbjct: 487 TLGIAAGNVIAKALES-HPELERCLWSDLFTGRLKNEIPPILEALGKAMMTAGCKIKELD 545
Query: 222 LSHNALGEKGVRAFGALLKSQNN--LEELHLMNDGIS---EEAAQAILELIPST-----E 271
LS NA G G A LL+S ++ LE L L N+G+ ++ A+++ E + + E
Sbjct: 546 LSDNAFGPIGADALKDLLESPSSFSLEVLKLNNNGLGIGGKQIAKSLTECLRKSIAVGGE 605
Query: 272 ---KLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTH 328
+LK N + GA A++ K +E F I EG AL AL +
Sbjct: 606 NRLRLKTFIAGRNRLENPGAHALAATFKALETVEWFDVRQNGIHEEGIRALVAALKHNRN 665
Query: 329 LKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLS 363
L+ L L DN + AL++ L ++P L + LS
Sbjct: 666 LRYLWLEDNTVLPKGAKALAKTLESWPKLEVLNLS 700
Score = 123 (48.4 bits), Expect = 0.00051, P = 0.00051
Identities = 44/169 (26%), Positives = 77/169 (45%)
Query: 127 DISGGQRGFIEEEEAKLLLGPLTEPGN-SYTRICFSNKSFGLGASRVAAPILRLIKDQLT 185
D+S G I + K LL P + S + +N G+G ++A + ++ +
Sbjct: 545 DLSDNAFGPIGADALKDLL---ESPSSFSLEVLKLNNNGLGIGGKQIAKSLTECLRKSIA 601
Query: 186 -----EVDLSDFIAGRP--EEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGAL 238
+ L FIAGR E + ALE + + ++ N + E+G+RA A
Sbjct: 602 VGGENRLRLKTFIAGRNRLENPGAHALAATFKALE--TVEWFDVRQNGIHEEGIRALVAA 659
Query: 239 LKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEG 287
LK NL L L ++ + + A+A+ + + S KL+VL+ + + D G
Sbjct: 660 LKHNRNLRYLWLEDNTVLPKGAKALAKTLESWPKLEVLNLSDCLIRDAG 708
Score = 115 (45.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 65/257 (25%), Positives = 108/257 (42%)
Query: 95 LMLEVIK-RGPRTKEDGEEMIAEKATAASQTVFDI-SGGQRGFIEEEEAKLL--LGP-LT 149
L LEV+ RG ++IAE + I S G +++E +L LG LT
Sbjct: 70 LNLEVLDFRGNTLSVLAGKLIAESLKTRRELKECIWSDMFTGRLKDEIPLVLDALGEALT 129
Query: 150 EPGNSYTRICFSNKSFGLGASR-----VAAPILRLIKDQ-LTEVDLSDFIAGRPEEEAL- 202
G T + S+ +FG G S + +P L +++ L L +AG+ +AL
Sbjct: 130 ASGCRLTTLDLSDNAFGAGLSTSLYNFLQSPALYSLENLILNNNGLG--LAGKTVGKALC 187
Query: 203 EVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQA 262
+I+ A +L+ N L + A LEE+ L +GI ++ A
Sbjct: 188 SLIDASKKAGTPLKLKKFVCGRNRLEVESTIALSDAFIKLGTLEEIRLPQNGIRDDGIIA 247
Query: 263 ILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKA 322
+ E +KL+++ ++N EGA+ ISE++ +E G +A+
Sbjct: 248 LAEAFRMNKKLRIIDINDNFCCPEGAIQISEVLSDLQFIEVLDLGDCVCDDPGVLAIIAE 307
Query: 323 LGQCTH--LKKLDLRDN 337
L + LKK+ L N
Sbjct: 308 LDKINRDCLKKVVLSGN 324
Score = 64 (27.6 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 18/72 (25%), Positives = 38/72 (52%)
Query: 418 NLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNIN 477
++ +N + +EG + +L+ L + L N++ GA+ LA+ + P L++LN++
Sbjct: 642 DVRQNGIHEEGIRALVAALKHNRN-LRYLWLEDNTVLPKGAKALAKTLESWPKLEVLNLS 700
Query: 478 GNFIPDEGIDEV 489
I D G + +
Sbjct: 701 DCLIRDAGCNYI 712
Score = 60 (26.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 34/131 (25%), Positives = 57/131 (43%)
Query: 383 APSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKL---NLAENELQDE-GAIL--IGKSL 436
A S++ L+L GN + L + +L L++E IL +GK++
Sbjct: 475 ASSMKALELRGNTLGIAAGNVIAKALESHPELERCLWSDLFTGRLKNEIPPILEALGKAM 534
Query: 437 EEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPG---LKMLNINGNFIPDEGIDEVK--- 490
++ E+DLS N+ GA L + + P L++L +N N + G K
Sbjct: 535 MTAGCKIKELDLSDNAFGPIGADALKDL-LESPSSFSLEVLKLNNNGLGIGGKQIAKSLT 593
Query: 491 EILKHSLDVLG 501
E L+ S+ V G
Sbjct: 594 ECLRKSIAVGG 604
Score = 49 (22.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 451 NSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKHS 496
N ++ GA LA ++ ++ N I +EGI + LKH+
Sbjct: 618 NRLENPGAHALAATFKALETVEWFDVRQNGIHEEGIRALVAALKHN 663
>MGI|MGI:98640 [details] [associations]
symbol:Tcte1 "t-complex-associated testis expressed 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:98640
GeneTree:ENSGT00640000091171 UniGene:Mm.329064 EMBL:M28821
EMBL:BC145741 IPI:IPI01008396 PIR:A45841 PIR:A45878
RefSeq:NP_038716.2 ProteinModelPortal:A6H639 SMR:A6H639
STRING:A6H639 PhosphoSite:A6H639 PRIDE:A6H639
Ensembl:ENSMUST00000113547 GeneID:21645 KEGG:mmu:21645
UCSC:uc008cqt.1 CTD:202500 eggNOG:NOG258271 HOGENOM:HOG000007147
HOVERGEN:HBG056299 OMA:GSWKRMF ChiTaRS:TCTE1 NextBio:300902
Bgee:A6H639 Genevestigator:A6H639 Uniprot:A6H639
Length = 498
Score = 164 (62.8 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 57/203 (28%), Positives = 92/203 (45%)
Query: 157 RICFSNKSFGLGASRV----AAPILRLIKDQ--LTEVDLSDFIAGRPEEEALEVINMFSS 210
+ C + K F L S+V A ++R + D L E+DLS + G A +
Sbjct: 274 KACHTLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARAA------AK 327
Query: 211 ALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPST 270
L S+LR LNL++N L G ++ L NL L+L + I +E QAI + +
Sbjct: 328 LLSHSRLRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHALETN 387
Query: 271 EKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLK 330
+ L VLH N + A +S+++ + L S IG +GG L + + +
Sbjct: 388 KCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQLLEGISDNKTIL 447
Query: 331 KLDLRDNMFGVEAGVALSEVLPA 353
+ DLR + E+ + +VL A
Sbjct: 448 EFDLRLSDVSQESEYLIGQVLHA 470
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 45/203 (22%), Positives = 87/203 (42%)
Query: 234 AFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISE 293
+ A +K+ + L+ L + ++ A+ ++ + L+ L +N+ GD GA A ++
Sbjct: 268 SLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAK 327
Query: 294 IVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPA 353
++ HS L ++ ++ A G +LA AL T+L L+LR N E G A++ L
Sbjct: 328 LLSHS-RLRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHALET 386
Query: 354 FPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQF 413
L+ ++L +L L+L+ N I +
Sbjct: 387 NKCLSVLHLG-GNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQLLEGISDNKT 445
Query: 414 LTKLNLAENELQDEGAILIGKSL 436
+ + +L +++ E LIG+ L
Sbjct: 446 ILEFDLRLSDVSQESEYLIGQVL 468
>TAIR|locus:2167831 [details] [associations]
symbol:WPP1 "WPP domain protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005640 "nuclear outer membrane" evidence=IDA] [GO:0048527
"lateral root development" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=RCA]
[GO:0006913 "nucleocytoplasmic transport" evidence=RCA]
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0048527
GO:GO:0005640 GO:GO:0016363 EMBL:AB008267 InterPro:IPR025265
Pfam:PF13943 EMBL:BT025708 EMBL:AY088852 IPI:IPI00524927
RefSeq:NP_199121.1 UniGene:At.30141 IntAct:Q9FMH6 STRING:Q9FMH6
PaxDb:Q9FMH6 PRIDE:Q9FMH6 EnsemblPlants:AT5G43070.1 GeneID:834323
KEGG:ath:AT5G43070 TAIR:At5g43070 eggNOG:NOG319401
HOGENOM:HOG000239842 InParanoid:Q9FMH6 OMA:PSERTRD PhylomeDB:Q9FMH6
ProtClustDB:CLSN2686648 Genevestigator:Q9FMH6 Uniprot:Q9FMH6
Length = 155
Score = 141 (54.7 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 40/129 (31%), Positives = 65/129 (50%)
Query: 4 TTETLQHH---ALSVKLWPPSQSTRLMLVQRMTKNLTTPSIFSRKYGLLSXXXXXXXXXX 60
TTET ++ +S+++WPP+Q TR ++ R+ + L+T SI S+++G L
Sbjct: 28 TTETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKRFGSLESEEASSVAKS 87
Query: 61 XXXLAFAAANQHYEKEPDGDGSSSVQIYAKESSKLMLEVIKR-----GPRTKE-DGEEMI 114
A+A A+ D DG ++ Y+KE SK MLE +K P K+ DG E
Sbjct: 88 IEDEAYAIASATVFG--DDDGIEILKAYSKEISKRMLESVKAKSNVASPPPKDGDGIESA 145
Query: 115 AEKATAASQ 123
+ +S+
Sbjct: 146 VDSKIDSSE 154
>MGI|MGI:103071 [details] [associations]
symbol:Rangap1 "RAN GTPase activating protein 1"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005098
"Ran GTPase activator activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0046826 "negative regulation of
protein export from nucleus" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] InterPro:IPR009109
InterPro:IPR027038 Pfam:PF07834 MGI:MGI:103071 GO:GO:0048471
GO:GO:0007165 GO:GO:0005819 GO:GO:0031965 GO:GO:0046826
GO:GO:0000777 GO:GO:0032853 eggNOG:COG5238 KO:K14319
GeneTree:ENSGT00440000039203 GO:GO:0005098 PANTHER:PTHR24113
CTD:5905 HOVERGEN:HBG017720 OMA:SFNSNAF OrthoDB:EOG4K0QN7
ChiTaRS:RANGAP1 Gene3D:1.25.40.200 SUPFAM:SSF69099 EMBL:U08110
EMBL:U20857 EMBL:AK146670 EMBL:AK159009 EMBL:AK159525 EMBL:BC066213
EMBL:BC071200 IPI:IPI00467338 PIR:A36983 PIR:T52070
RefSeq:NP_001139646.1 RefSeq:NP_035371.4 UniGene:Mm.270975 PDB:1KPS
PDBsum:1KPS ProteinModelPortal:P46061 SMR:P46061 DIP:DIP-17024N
IntAct:P46061 STRING:P46061 PhosphoSite:P46061 PaxDb:P46061
PRIDE:P46061 Ensembl:ENSMUST00000052374 Ensembl:ENSMUST00000170134
Ensembl:ENSMUST00000171115 GeneID:19387 KEGG:mmu:19387
InParanoid:Q6NZB5 EvolutionaryTrace:P46061 NextBio:296501
Bgee:P46061 CleanEx:MM_RANGAP1 Genevestigator:P46061
GermOnline:ENSMUSG00000022391 Uniprot:P46061
Length = 589
Score = 164 (62.8 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 58/241 (24%), Positives = 107/241 (44%)
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA---LEDFRCSSTRIGAEGGIALAKA 322
LI + +L L +N G +G ++K SPA L++ + ++ +G GG LA A
Sbjct: 107 LITAGAQLVELDLSDNAFGPDGVRGFEALLK-SPACFTLQELKLNNCGMGIGGGKILAAA 165
Query: 323 LGQCTHL-----KKLDLR-----DNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXX 372
L +C K L L+ N + AL+E L EV++
Sbjct: 166 LTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGV 225
Query: 373 XXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILI 432
P L V++L N T + + +N + ++ +GA+ I
Sbjct: 226 TALAQAFAI-NPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAI 284
Query: 433 GKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEI 492
++ G +L E++LS +KR A ++A+ +K L+ L++NGN + +EG ++++E+
Sbjct: 285 ADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEV 344
Query: 493 L 493
+
Sbjct: 345 M 345
Score = 164 (62.8 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 66/262 (25%), Positives = 118/262 (45%)
Query: 110 GEEMIAEKATAASQTVFDISGGQRGFIEEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGA 169
GE +I A + D + G G + EA LL P + + +N G+G
Sbjct: 104 GEGLITAGAQLVELDLSDNAFGPDG-VRGFEA-LLKSPACF---TLQELKLNNCGMGIGG 158
Query: 170 SRVAAPIL----RLIKDQLTEVDLSDFIAGRPEEE---ALEVINMFSSALEGSQLRYLNL 222
++ A L R Q + L F+AGR E A + F + G+ L +++
Sbjct: 159 GKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFG--IIGT-LEEVHM 215
Query: 223 SHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNM 282
N + GV A L ++L ++ +E+ A+ E + + +++V++F + +
Sbjct: 216 PQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCL 275
Query: 283 TGDEGAVAISEIVKHS-PALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGV 341
+GAVAI++ V+ P L++ S I + + +A+A+ L+KLDL N G
Sbjct: 276 VRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGE 335
Query: 342 EAGVALSEVLPAFPDLTEVYLS 363
E L EV+ +F ++ +V S
Sbjct: 336 EGCEQLQEVMDSF-NMAKVLAS 356
>ZFIN|ZDB-GENE-060421-8264 [details] [associations]
symbol:zgc:136791 "zgc:136791" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-060421-8264 InterPro:IPR007111
PROSITE:PS50837 eggNOG:NOG82860 OrthoDB:EOG4HX508
GeneTree:ENSGT00690000101934 EMBL:AL929041 IPI:IPI00758745
UniGene:Dr.113712 UniGene:Dr.84346 ProteinModelPortal:A5PF24
Ensembl:ENSDART00000144759 HOVERGEN:HBG092009 OMA:PHCKLEK
ArrayExpress:A5PF24 Bgee:A5PF24 Uniprot:A5PF24
Length = 938
Score = 166 (63.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 78/286 (27%), Positives = 123/286 (43%)
Query: 209 SSALEG--SQLRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILE 265
+SAL S LR L+LS+N +G+ GV+ A LK + LE+L L G+S+E +
Sbjct: 655 ASALRSNSSNLRELDLSYNIVGDSGVKLLSAGLKDPHCKLEKLRLRCCGVSDEGCADLAS 714
Query: 266 LIPS-TEKLKVLHFHNNMT-GDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKA 322
++ S + L+ L N+ GD G +S +K LE R + EG ALA
Sbjct: 715 VLRSNSSNLRELELSKNINVGDSGVKLLSAGLKDPHCKLEKLRLGYCGVSDEGCAALASV 774
Query: 323 L-GQCTHLKKLDLRDNMFGVEAGVA-LSEVLPAFPD--LTEVYLSYXXXXXXXXXXXXXX 378
L ++L++LDL DN V++GV LS L P L + L
Sbjct: 775 LRSNSSNLRELDLSDNKI-VDSGVKRLSAGLKD-PQCKLETLRLINCDVSGKGCAALASA 832
Query: 379 XXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQF-LTKLNLAENELQDEGAILIGKSLE 437
+ +L L+L+ N + L KL L + D + +L
Sbjct: 833 LRSNSSNLRELNLSENKVGDSGVKRLSAGLKDPHCKLEKLTLNYCGVSDASCADLASALR 892
Query: 438 EGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM--LNINGNFI 481
L E++L N ++ G + L+ + + P K+ L+I+ FI
Sbjct: 893 SNSSNLRELNLKWNRVEGIGVKWLSDLR-DDPHYKLETLHISWGFI 937
Score = 133 (51.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 66/297 (22%), Positives = 115/297 (38%)
Query: 250 LMNDGISEEAAQAILELIPS-TEKLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCS 307
L + GIS++ A+ + S + L+ L N+ GD G +S +K LE R
Sbjct: 641 LFDCGISDKGCAALASALRSNSSNLRELDLSYNIVGDSGVKLLSAGLKDPHCKLEKLRLR 700
Query: 308 STRIGAEGGIALAKAL-GQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPD--LTEVYLSY 364
+ EG LA L ++L++L+L N+ ++GV L P L ++ L Y
Sbjct: 701 CCGVSDEGCADLASVLRSNSSNLRELELSKNINVGDSGVKLLSAGLKDPHCKLEKLRLGY 760
Query: 365 XXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQF-LTKLNLAENE 423
+ +L LDL+ N I Q L L L +
Sbjct: 761 CGVSDEGCAALASVLRSNSSNLRELDLSDNKIVDSGVKRLSAGLKDPQCKLETLRLINCD 820
Query: 424 LQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNF--I 481
+ +G + +L L E++LS N + +G + L+ + P K+ + N+ +
Sbjct: 821 VSGKGCAALASALRSNSSNLRELNLSENKVGDSGVKRLS-AGLKDPHCKLEKLTLNYCGV 879
Query: 482 PDEGIDEVKEILKHSLDVLGPLDENXXXXXXXXXXXXXXXXXIRNDLDSKLKELHIN 538
D ++ L+ + L L+ +R+D KL+ LHI+
Sbjct: 880 SDASCADLASALRSNSSNLRELN---LKWNRVEGIGVKWLSDLRDDPHYKLETLHIS 933
>UNIPROTKB|Q9Y239 [details] [associations]
symbol:NOD1 "Nucleotide-binding oligomerization
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IEA] [GO:0070374 "positive regulation of ERK1
and ERK2 cascade" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IDA;TAS] [GO:0016323 "basolateral plasma
membrane" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA;TAS]
[GO:0006917 "induction of apoptosis" evidence=IDA] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IDA;IPI] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IDA] [GO:0050700 "CARD
domain binding" evidence=IDA] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=TAS] [GO:0009595
"detection of biotic stimulus" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0035556 "intracellular signal
transduction" evidence=IDA] [GO:0006952 "defense response"
evidence=TAS] [GO:0042834 "peptidoglycan binding" evidence=TAS]
[GO:0051259 "protein oligomerization" evidence=TAS] [GO:0006954
"inflammatory response" evidence=TAS] [GO:0016045 "detection of
bacterium" evidence=IDA] [GO:0042742 "defense response to
bacterium" evidence=IDA] [GO:0042228 "interleukin-8 biosynthetic
process" evidence=IDA] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0002224 "toll-like receptor signaling pathway"
evidence=TAS] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0002756 "MyD88-independent
toll-like receptor signaling pathway" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0007254 "JNK cascade" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0034130
"toll-like receptor 1 signaling pathway" evidence=TAS] [GO:0034134
"toll-like receptor 2 signaling pathway" evidence=TAS] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=TAS] [GO:0034142
"toll-like receptor 4 signaling pathway" evidence=TAS] [GO:0035666
"TRIF-dependent toll-like receptor signaling pathway" evidence=TAS]
[GO:0035872 "nucleotide-binding domain, leucine rich repeat
containing receptor signaling pathway" evidence=TAS] [GO:0045087
"innate immune response" evidence=TAS] [GO:0051403
"stress-activated MAPK cascade" evidence=TAS] [GO:0070423
"nucleotide-binding oligomerization domain containing signaling
pathway" evidence=TAS] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=ISS]
Reactome:REACT_6782 InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209
GO:GO:0051259 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0016045 GO:GO:0006917 GO:GO:0050830 GO:GO:0007254
GO:GO:0016324 GO:GO:0043123 GO:GO:0042742 GO:GO:0006954
GO:GO:0070374 GO:GO:0046330 GO:GO:0045087 GO:GO:0016323
GO:GO:0032755 GO:GO:0000187 GO:GO:0042802 GO:GO:0051092
GO:GO:0008656 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0042834 GO:GO:0032760 GO:GO:0002755 GO:GO:0008063
GO:GO:0034130 GO:GO:0034134 GO:GO:0034138 GO:GO:0034142
GO:GO:0035666 GO:GO:0050700 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0070423 GO:GO:0002606 EMBL:AF126484 EMBL:AF149774
EMBL:AF113925 EMBL:AC006027 EMBL:BC040339 IPI:IPI00005776
RefSeq:NP_006083.1 UniGene:Hs.405153 PDB:2B1W PDB:2DBD PDB:2NSN
PDB:2NZ7 PDB:4E9M PDBsum:2B1W PDBsum:2DBD PDBsum:2NSN PDBsum:2NZ7
PDBsum:4E9M ProteinModelPortal:Q9Y239 SMR:Q9Y239 DIP:DIP-41064N
IntAct:Q9Y239 MINT:MINT-90728 STRING:Q9Y239 PhosphoSite:Q9Y239
DMDM:20137579 PaxDb:Q9Y239 PRIDE:Q9Y239 Ensembl:ENST00000222823
GeneID:10392 KEGG:hsa:10392 UCSC:uc003tav.3 CTD:10392
GeneCards:GC07M030464 HGNC:HGNC:16390 MIM:605980 neXtProt:NX_Q9Y239
PharmGKB:PA162398098 eggNOG:NOG275503 HOGENOM:HOG000113813
HOVERGEN:HBG050793 InParanoid:Q9Y239 KO:K08727 OMA:NDYGVRE
OrthoDB:EOG4WH8K2 PhylomeDB:Q9Y239 BindingDB:Q9Y239
ChEMBL:CHEMBL1293222 EvolutionaryTrace:Q9Y239 GenomeRNAi:10392
NextBio:39370 ArrayExpress:Q9Y239 Bgee:Q9Y239 CleanEx:HS_NOD1
Genevestigator:Q9Y239 GermOnline:ENSG00000106100 GO:GO:0042228
Uniprot:Q9Y239
Length = 953
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 43/144 (29%), Positives = 71/144 (49%)
Query: 219 YLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHF 278
YL L +N + + G R +L L L L + I+ E + + + +++ + +
Sbjct: 760 YLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGM 819
Query: 279 HNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNM 338
N GDEGA A +E +++ P+L +S I EGG +LA+AL Q T L+ L L N
Sbjct: 820 WGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNE 879
Query: 339 FGVEAGVALSEVLPAFPDLTEVYL 362
E +L+E+L L ++L
Sbjct: 880 LNDEVAESLAEMLKVNQTLKHLWL 903
Score = 157 (60.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 58/241 (24%), Positives = 101/241 (41%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
L+L +N L + GVR L + L L L + I++ + + E + + + L +
Sbjct: 708 LDLDNNNLNDYGVRE---LQPCFSRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLY 764
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
NN D GA +++I+ L + +I +EGG LA A+ + ++ + N
Sbjct: 765 NNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQV 824
Query: 340 GVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXX 399
G E A +E L P LT + L+ SLE+L L N++
Sbjct: 825 GDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNT-SLEILWLTQNELNDE 883
Query: 400 XXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGAR 459
Q L L L +N++ +G + +L+ G + EI L+ N +K A+
Sbjct: 884 VAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSNTG-ITEICLNGNLIKPEEAK 942
Query: 460 L 460
+
Sbjct: 943 V 943
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 39/149 (26%), Positives = 67/149 (44%)
Query: 215 SQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLK 274
S+L L LS N + + GV+ L + L L N+ I++ A+ + +++ + L
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLT 787
Query: 275 VLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDL 334
L N EG ++ VK+S ++ + ++G EG A A+AL L L L
Sbjct: 788 HLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSL 847
Query: 335 RDNMFGVEAGVALSEVLPAFPDLTEVYLS 363
N E G +L+ L L ++L+
Sbjct: 848 ASNGISTEGGKSLARALQQNTSLEILWLT 876
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 68/271 (25%), Positives = 109/271 (40%)
Query: 238 LLKSQNNLEELHLMNDGISEEAAQAILE-LIPST---EKLKVL--HFHNNMTGDEGAVAI 291
L K++++ + +L G+ +A Q +L L+P+ K K L H +++ G ++
Sbjct: 578 LFKNKDHFQFTNLFLCGLLSKAKQKLLRHLVPAAALRRKRKALWAHLFSSLRGYLKSLPR 637
Query: 292 SEIVKHSP--ALEDF----RCS-STRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAG 344
++ + A+ F RC T+ G +A A G C + KL N +
Sbjct: 638 VQVESFNQVQAMPTFIWMLRCIYETQSQKVGQLA---ARGICANYLKLTYC-NACSADCS 693
Query: 345 VALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXX 404
ALS VL FP L+ C L VL L+ N IT
Sbjct: 694 -ALSFVLHHFPKR----LALDLDNNNLNDYGVRELQPCFSRLTVLRLSVNQITDGGVKVL 748
Query: 405 XXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQV 464
+ +T L L N++ D GA + K L+E G L + L N + G + LA
Sbjct: 749 SEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKG-LTHLKLGKNKITSEGGKYLALA 807
Query: 465 AVNKPGLKMLNINGNFIPDEGIDEVKEILKH 495
N + + + GN + DEG E L++
Sbjct: 808 VKNSKSISEVGMWGNQVGDEGAKAFAEALRN 838
>UNIPROTKB|E1B7V7 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0050830 "defense
response to Gram-positive bacterium" evidence=IEA] [GO:0050700
"CARD domain binding" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042228 "interleukin-8 biosynthetic process" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0016045 "detection of bacterium"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IEA]
InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209 GO:GO:0005737
GO:GO:0016045 GO:GO:0006917 GO:GO:0050830 GO:GO:0035556
GO:GO:0043123 GO:GO:0070374 GO:GO:0046330 GO:GO:0016323
GO:GO:0032755 GO:GO:0006919 GO:GO:0051092 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0032760 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0002606 CTD:10392 KO:K08727 OMA:NDYGVRE
GO:GO:0042228 GeneTree:ENSGT00660000095240 EMBL:DAAA02010901
IPI:IPI00924206 RefSeq:NP_001243492.1 UniGene:Bt.106142
UniGene:Bt.42716 UniGene:Bt.89027 ProteinModelPortal:E1B7V7
PRIDE:E1B7V7 Ensembl:ENSBTAT00000061183 GeneID:781426
KEGG:bta:781426 NextBio:20924824 Uniprot:E1B7V7
Length = 954
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 58/241 (24%), Positives = 104/241 (43%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
L+L +N L + GVR L + L + L + I++ + + E + + L L +
Sbjct: 709 LDLDNNNLNDFGVRE---LQPCFSRLTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLY 765
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
NN D GA I+ I+ L + +I +EGG +LA A+ + ++ + N
Sbjct: 766 NNQITDVGARYIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQI 825
Query: 340 GVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXX 399
G E A +E L P LT + L++ A SL + L N++
Sbjct: 826 GDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNA-SLRIFWLTKNELDDE 884
Query: 400 XXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGAR 459
Q L L L +N++ +G + ++L++ G ++EI L+ N +K A+
Sbjct: 885 VAESFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKNTG-IMEICLNGNLIKPEEAK 943
Query: 460 L 460
+
Sbjct: 944 V 944
Score = 142 (55.0 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 39/146 (26%), Positives = 69/146 (47%)
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVL 276
L +L L +N + + G R +L L L L + I+ E +++ + +++ + +
Sbjct: 759 LTFLGLYNNQITDVGARYIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEV 818
Query: 277 HFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRD 336
N GDEGA A +E +++ P+L + + I EGG +LA AL Q L+ L
Sbjct: 819 GMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNASLRIFWLTK 878
Query: 337 NMFGVEAGVALSEVLPAFPDLTEVYL 362
N E + +E+L L ++L
Sbjct: 879 NELDDEVAESFAEMLKVNQTLKHLWL 904
>UNIPROTKB|E1BR67 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002606 "positive regulation of dendritic cell antigen
processing and presentation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0016045 "detection
of bacterium" evidence=IEA] [GO:0016323 "basolateral plasma
membrane" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0042228 "interleukin-8 biosynthetic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0050700 "CARD domain binding"
evidence=IEA] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209 GO:GO:0005737
GO:GO:0006917 GO:GO:0035556 GO:GO:0043123 GO:GO:0070374
GO:GO:0046330 GO:GO:0016323 GO:GO:0032755 GO:GO:0006919
GO:GO:0051092 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0032760 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0002606
CTD:10392 KO:K08727 GeneTree:ENSGT00660000095240 EMBL:AADN02001205
IPI:IPI00589517 RefSeq:XP_418777.2 UniGene:Gga.40185
ProteinModelPortal:E1BR67 Ensembl:ENSGALT00000018808 GeneID:420677
KEGG:gga:420677 OMA:MFEIGMW NextBio:20823559 Uniprot:E1BR67
Length = 951
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 52/240 (21%), Positives = 110/240 (45%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
L+L +N + + GV+ LL + L + L + I++ A+ + E + + + L +
Sbjct: 706 LDLDNNNINDYGVKQ---LLPCFSKLAVIRLSVNQITDHGARILYEELSKYQIVSYLGLY 762
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
NN D GA ++++++ +LE + + +I +EGG LA+A+ + T + ++ + N
Sbjct: 763 NNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQV 822
Query: 340 GVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXX 399
G E A ++ L P LT V L++ S+++ L N++
Sbjct: 823 GDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQH-NDSVKIFWLTKNELDDE 881
Query: 400 XXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGAR 459
+ L L L +N++ +G + ++L+E + E+ L+ N + + A+
Sbjct: 882 AAMSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALKENTA-IKEVCLNGNLISQEEAK 940
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/144 (25%), Positives = 71/144 (49%)
Query: 219 YLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHF 278
YL L +N + + G + L++ ++LE + + + I+ E + + + I + + +
Sbjct: 758 YLGLYNNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGM 817
Query: 279 HNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNM 338
N GDEGA A ++ +++ P L + + I EGG ++A+AL +K L N
Sbjct: 818 WGNQVGDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIFWLTKNE 877
Query: 339 FGVEAGVALSEVLPAFPDLTEVYL 362
EA ++ +E+L L ++L
Sbjct: 878 LDDEAAMSFAEMLKINKKLVHLWL 901
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/194 (23%), Positives = 96/194 (49%)
Query: 154 SYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALE 213
SY + ++N+ +GA VA +LI ++ + ++ A + E + + + A++
Sbjct: 757 SYLGL-YNNQITDIGAKYVA----KLI-EECSSLEYVKIGANKITSEGGKCL---AQAIQ 807
Query: 214 GSQLRY-LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEK 272
S + + + N +G++G +AF L++ L + L +GI+ E ++I E + +
Sbjct: 808 KSTTMFEIGMWGNQVGDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNDS 867
Query: 273 LKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
+K+ N DE A++ +E++K + L +I A+G L++AL + T +K++
Sbjct: 868 VKIFWLTKNELDDEAAMSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALKENTAIKEV 927
Query: 333 DLRDNMFGVEAGVA 346
L N+ E A
Sbjct: 928 CLNGNLISQEEAKA 941
Score = 136 (52.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 55/240 (22%), Positives = 97/240 (40%)
Query: 248 LHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGA-VAISEIVKHSPA--LEDF 304
L L N+ I++ + +L+P KL V+ N D GA + E+ K+ L +
Sbjct: 706 LDLDNNNIND---YGVKQLLPCFSKLAVIRLSVNQITDHGARILYEELSKYQIVSYLGLY 762
Query: 305 RCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSY 364
T IGA+ +AK + +C+ L+ + + N E G L++ + + E+ + +
Sbjct: 763 NNQITDIGAK---YVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGM-W 818
Query: 365 XXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENEL 424
P L + LA N IT + L +NEL
Sbjct: 819 GNQVGDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIFWLTKNEL 878
Query: 425 QDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDE 484
DE A+ + L+ +L+ + L N + G + L++ +K + +NGN I E
Sbjct: 879 DDEAAMSFAEMLKINK-KLVHLWLIQNQITAKGVKYLSEALKENTAIKEVCLNGNLISQE 937
>FB|FBgn0003346 [details] [associations]
symbol:RanGAP "Ran GTPase activating protein" species:7227
"Drosophila melanogaster" [GO:0005098 "Ran GTPase activator
activity" evidence=IDA;NAS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0006913 "nucleocytoplasmic transport" evidence=NAS] [GO:0045132
"meiotic chromosome segregation" evidence=TAS] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR027038 GO:GO:0005737
EMBL:AE014134 GO:GO:0022008 GO:GO:0006913 GO:GO:0045132
eggNOG:COG5238 KO:K14319 EMBL:AF143860 EMBL:AY061219
RefSeq:NP_476712.1 UniGene:Dm.3220 ProteinModelPortal:Q9VIW3
SMR:Q9VIW3 DIP:DIP-23850N IntAct:Q9VIW3 MINT:MINT-885779
STRING:Q9VIW3 PaxDb:Q9VIW3 PRIDE:Q9VIW3 EnsemblMetazoa:FBtr0081234
GeneID:35223 KEGG:dme:Dmel_CG9999 CTD:35223 FlyBase:FBgn0003346
GeneTree:ENSGT00440000039203 InParanoid:Q9VIW3 OMA:AEETAYV
OrthoDB:EOG4V15GM PhylomeDB:Q9VIW3 ChiTaRS:SD GenomeRNAi:35223
NextBio:792463 Bgee:Q9VIW3 GermOnline:CG9999 GO:GO:0005098
PANTHER:PTHR24113 Uniprot:Q9VIW3
Length = 596
Score = 158 (60.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 74/319 (23%), Positives = 134/319 (42%)
Query: 185 TEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQ-N 243
T D+ D + ++ + +N+ + L G + + A+GE G++ K+
Sbjct: 30 TAADVQDVVDALNKQTTVHYLNLDGNTL-GVE------AAKAIGE-GLKRHPEFRKALWK 81
Query: 244 NLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSP---A 300
N+ L+++ I E LI + KL VL +N G G + E+++ SP +
Sbjct: 82 NMFTGRLISE-IPEALKHLGAALIVAGAKLTVLDLSDNALGPNGMRGLEELLR-SPVCYS 139
Query: 301 LEDFRCSSTRIGAEGGIALAKALGQC-THLKK--LDLRDNMF-GVE---AGVALSEVLPA 353
L++ + +G EGG L++AL + K L+ +F G +E+ A
Sbjct: 140 LQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPLQLRVFIGSRNRLEDAGATEMATA 199
Query: 354 FPDLT---EVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXX 410
F L E+ L P L VL++ N +
Sbjct: 200 FQTLKTFEEIVLEQNSIYIEGVEALAESFKH-NPHLRVLNMNDNTLKSEGAEKIAEALPF 258
Query: 411 XQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPG 470
L +++ + ++ GA G++LE G+ +L IDL N + G +L NKP
Sbjct: 259 LPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSDGGLVLVNAMGNKPK 318
Query: 471 LKMLNINGNFIPDEGIDEV 489
L++LN++GN +EG +++
Sbjct: 319 LRILNLDGNSFGEEGSEKI 337
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 58/243 (23%), Positives = 96/243 (39%)
Query: 121 ASQTVFDISG---GQRGFIEEEEAKLLLGPLTEPGNSYTRICFSNKSFGL-GASRVAAPI 176
A TV D+S G G EE LL P+ S + N G G S ++ +
Sbjct: 108 AKLTVLDLSDNALGPNGMRGLEE--LLRSPVCY---SLQELLLCNCGLGPEGGSMLSRAL 162
Query: 177 LRLIKDQLTE---VDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVR 233
+ L + + L FI R E M ++ + L N++ +GV
Sbjct: 163 IDLHANANKAGFPLQLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVE 222
Query: 234 AFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISE 293
A K +L L++ ++ + E A+ I E +P L+ + F + + GA E
Sbjct: 223 ALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGE 282
Query: 294 IVKH-SPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLP 352
++ + LE I ++GG+ L A+G L+ L+L N FG E + +
Sbjct: 283 ALERGNERLEVIDLGFNEINSDGGLVLVNAMGNKPKLRILNLDGNSFGEEGSEKIISEMS 342
Query: 353 AFP 355
P
Sbjct: 343 KLP 345
>MGI|MGI:1195456 [details] [associations]
symbol:Rnh1 "ribonuclease/angiogenin inhibitor 1"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008428 "ribonuclease inhibitor activity" evidence=ISO]
[GO:0032311 "angiogenin-PRI complex" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0045765 "regulation of angiogenesis" evidence=ISO]
MGI:MGI:1195456 GO:GO:0005737 GO:GO:0045765 GO:GO:0008428
GO:GO:0032311 eggNOG:NOG309390 InterPro:IPR003590 SMART:SM00368
CTD:6050 HOGENOM:HOG000140402 HOVERGEN:HBG001059 KO:K16634
OMA:MEDRLQA OrthoDB:EOG4DZ1VG ChiTaRS:RNH1 EMBL:AF071546
EMBL:AK133822 EMBL:AK141351 EMBL:AK147059 EMBL:BC010331
IPI:IPI00313296 RefSeq:NP_001165571.1 RefSeq:NP_001165572.1
RefSeq:NP_660117.2 UniGene:Mm.279485 PDB:3TSR PDBsum:3TSR
ProteinModelPortal:Q91VI7 SMR:Q91VI7 IntAct:Q91VI7 STRING:Q91VI7
PhosphoSite:Q91VI7 UCD-2DPAGE:Q91VI7 PaxDb:Q91VI7 PRIDE:Q91VI7
Ensembl:ENSMUST00000106033 Ensembl:ENSMUST00000167493 GeneID:107702
KEGG:mmu:107702 UCSC:uc009kjs.2 GeneTree:ENSGT00670000097902
InParanoid:Q91VI7 NextBio:359282 Bgee:Q91VI7 CleanEx:MM_RNH1
Genevestigator:Q91VI7 GermOnline:ENSMUSG00000038650 Uniprot:Q91VI7
Length = 456
Score = 155 (59.6 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 86/347 (24%), Positives = 143/347 (41%)
Query: 176 ILRLIKDQLTEV---DLSDFIAGRPEEEALEV-INMFSSA-----LEGSQ-----LRYLN 221
++RL LTEV D+S + P L + N L+G Q ++ L+
Sbjct: 27 VVRLDDCGLTEVRCKDISSAVQANPALTELSLRTNELGDGGVGLVLQGLQNPTCKIQKLS 86
Query: 222 LSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTE-KLKVLHF-H 279
L + L E G +L+S + L ELHL ++ + + + + E + + +L+ L +
Sbjct: 87 LQNCGLTEAGCGILPGMLRSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQCRLEKLQLEY 146
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKAL-GQCTHLKKLDLRDNM 338
N+T ++ +++ ++ S+ + G L + L L+ L L +N
Sbjct: 147 CNLTATS-CEPLASVLRVKADFKELVLSNNDLHEPGVRILCQGLKDSACQLESLKL-ENC 204
Query: 339 FGVEAGVA--LSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDI 396
G+ A L +V+ + L E+ LS + L L L DI
Sbjct: 205 -GITAANCKDLCDVVASKASLQELDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDI 263
Query: 397 TXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRA 456
T Q L +L+LA NEL+DEGA L+ +SL E QL + + T S+ A
Sbjct: 264 TAEGCKDLCRVLRAKQSLKELSLASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAA 323
Query: 457 GARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKHSLDVLGPL 503
V L L ++ N + DEG+ E+ + L VL L
Sbjct: 324 SCPYFCSVLTKSRSLLELQMSSNPLGDEGVQELCKALSQPDTVLREL 370
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 80/356 (22%), Positives = 138/356 (38%)
Query: 143 LLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEAL 202
L+L L P ++ N + +LR + L E+ L+D G + L
Sbjct: 70 LVLQGLQNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLST-LRELHLNDNPMGDAGLKLL 128
Query: 203 -EVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQ 261
E + LE QL Y NL+ + ++L+ + + +EL L N+ + E +
Sbjct: 129 CEGLQDPQCRLEKLQLEYCNLTATSC-----EPLASVLRVKADFKELVLSNNDLHEPGVR 183
Query: 262 AILE-LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALA 320
+ + L S +L+ L N + ++V +L++ SS ++G G AL
Sbjct: 184 ILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLSSNKLGNAGIAALC 243
Query: 321 KAL--GQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXX 378
L C L+ L L + E L VL A L E+ L+
Sbjct: 244 PGLLLPSCK-LRTLWLWECDITAEGCKDLCRVLRAKQSLKELSLASNELKDEGARLLCES 302
Query: 379 XXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEE 438
LE L + +T + L +L ++ N L DEG + K+L +
Sbjct: 303 LLEPGCQLESLWIKTCSLTAASCPYFCSVLTKSRSLLELQMSSNPLGDEGVQELCKALSQ 362
Query: 439 GHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILK 494
L E+ L + +G LA V + L+ L+++ N + G+ ++ E LK
Sbjct: 363 PDTVLRELWLGDCDVTNSGCSSLANVLLANRSLRELDLSNNCMGGPGVLQLLESLK 418
>UNIPROTKB|E1C3J0 [details] [associations]
symbol:LOC100859479 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR002048 InterPro:IPR011992 PROSITE:PS50222 GO:GO:0005509
Gene3D:1.10.238.10 GeneTree:ENSGT00640000091171 EMBL:AADN02003486
IPI:IPI00822711 Ensembl:ENSGALT00000037695 Uniprot:E1C3J0
Length = 497
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 43/140 (30%), Positives = 65/140 (46%)
Query: 208 FSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELI 267
F S Q++ L+LSHN EKG + G +L LE L L + + + A +
Sbjct: 152 FVSLQSNYQVKELDLSHNEFSEKGGQLLGQMLAVNTTLEILDLSWNHLRRKGTVAFGTGL 211
Query: 268 PSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCT 327
LK+L+ N G+EGA A++E +K + L S+ +I EG + K L
Sbjct: 212 KGNAALKILNLSWNSIGNEGAQALAEALKVNSVLIHLDISNNQINNEGAKKICKGLKVNG 271
Query: 328 HLKKLDLRDNMFGVEAGVAL 347
LK L + +N+ VE L
Sbjct: 272 TLKVLKMANNLLTVEGATEL 291
Score = 126 (49.4 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 34/103 (33%), Positives = 55/103 (53%)
Query: 208 FSSALEGSQ-LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILEL 266
F + L+G+ L+ LNLS N++G +G +A LK + L L + N+ I+ E A+ I +
Sbjct: 207 FGTGLKGNAALKILNLSWNSIGNEGAQALAEALKVNSVLIHLDISNNQINNEGAKKICKG 266
Query: 267 IPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSP--ALEDFRCS 307
+ LKVL NN+ EGA + V+ +P +E+ S
Sbjct: 267 LKVNGTLKVLKMANNLLTVEGATELVGSVRKNPNSVMEEINIS 309
Score = 108 (43.1 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 34/118 (28%), Positives = 59/118 (50%)
Query: 385 SLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLI 444
+LE+LDL+ N + L LNL+ N + +EGA + ++L+ + LI
Sbjct: 188 TLEILDLSWNHLRRKGTVAFGTGLKGNAALKILNLSWNSIGNEGAQALAEALKV-NSVLI 246
Query: 445 EIDLSTNSMKRAGARLLAQ-VAVNKPGLKMLNINGNFIPDEGIDE-VKEILKHSLDVL 500
+D+S N + GA+ + + + VN LK+L + N + EG E V + K+ V+
Sbjct: 247 HLDISNNQINNEGAKKICKGLKVNGT-LKVLKMANNLLTVEGATELVGSVRKNPNSVM 303
Score = 100 (40.3 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 31/90 (34%), Positives = 47/90 (52%)
Query: 416 KLNLAENELQDEGAILIGKSLEEGHGQLIEI-DLSTNSMKRAGARLLAQVAVNKPGLKML 474
+L+L+ NE ++G L+G+ L +EI DLS N ++R G LK+L
Sbjct: 163 ELDLSHNEFSEKGGQLLGQMLAVN--TTLEILDLSWNHLRRKGTVAFGTGLKGNAALKIL 220
Query: 475 NINGNFIPDEGIDEVKEILKHSLDVLGPLD 504
N++ N I +EG + E LK + VL LD
Sbjct: 221 NLSWNSIGNEGAQALAEALKVN-SVLIHLD 249
Score = 96 (38.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 39/150 (26%), Positives = 64/150 (42%)
Query: 329 LKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEV 388
+K+LDL N F + G L ++L L + LS+ A +L++
Sbjct: 161 VKELDLSHNEFSEKGGQLLGQMLAVNTTLEILDLSWNHLRRKGTVAFGTGLKGNA-ALKI 219
Query: 389 LDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDL 448
L+L+ N I L L+++ N++ +EGA I K L+ +G L + +
Sbjct: 220 LNLSWNSIGNEGAQALAEALKVNSVLIHLDISNNQINNEGAKKICKGLKV-NGTLKVLKM 278
Query: 449 STNSMKRAGA-RLLAQVAVNKPGLKMLNIN 477
+ N + GA L+ V N P M IN
Sbjct: 279 ANNLLTVEGATELVGSVRKN-PNSVMEEIN 307
Score = 95 (38.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 40/151 (26%), Positives = 67/151 (44%)
Query: 389 LDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDL 448
LDL+ N+ + L L+L+ N L+ +G + G L+ G+ L ++L
Sbjct: 164 LDLSHNEFSEKGGQLLGQMLAVNTTLEILDLSWNHLRRKGTVAFGTGLK-GNAALKILNL 222
Query: 449 STNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKHSLDVLGPLDE-NX 507
S NS+ GA+ LA+ L L+I+ N I +EG K+I K L V G L
Sbjct: 223 SWNSIGNEGAQALAEALKVNSVLIHLDISNNQINNEG---AKKICK-GLKVNGTLKVLKM 278
Query: 508 XXXXXXXXXXXXXXXXIRNDLDSKLKELHIN 538
+R + +S ++E++I+
Sbjct: 279 ANNLLTVEGATELVGSVRKNPNSVMEEINIS 309
Score = 92 (37.4 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 219 YLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVL 276
Y+NL+H+ LG KGV+A L S + L L ++ I E A+ I E++ L+ L
Sbjct: 17 YINLNHHGLGPKGVKAIAIALVSNATVTHLELEDNHILAEGAKCIAEMLRENCSLREL 74
>POMBASE|SPAC22E12.07 [details] [associations]
symbol:rna1 "Ran GAP Rna1" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IGI] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0031965 "nuclear membrane" evidence=IDA]
[GO:0032853 "positive regulation of Ran GTPase activity"
evidence=TAS] [GO:0046827 "positive regulation of protein export
from nucleus" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IGI] InterPro:IPR027038 PomBase:SPAC22E12.07 GO:GO:0005829
GO:GO:0048471 GO:GO:0046827 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0031965 GO:GO:0006913 GO:GO:0030702 GO:GO:0000070
GO:GO:0051383 eggNOG:COG5238 KO:K14319 GO:GO:0005098
PANTHER:PTHR24113 HOGENOM:HOG000195026 PDB:1K5D PDB:1K5G
PDBsum:1K5D PDBsum:1K5G EMBL:X69882 PIR:S37691 RefSeq:NP_594833.1
PDB:1YRG PDB:2CA6 PDBsum:1YRG PDBsum:2CA6 ProteinModelPortal:P41391
SMR:P41391 IntAct:P41391 STRING:P41391 PRIDE:P41391
EnsemblFungi:SPAC22E12.07.1 GeneID:2541863 KEGG:spo:SPAC22E12.07
OMA:GIQHAGI OrthoDB:EOG40S3QS EvolutionaryTrace:P41391
NextBio:20802950 Uniprot:P41391
Length = 386
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 64/239 (26%), Positives = 104/239 (43%)
Query: 136 IEEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAG 195
I E+ K + L E +S I S + G A+R + + KD L + SD G
Sbjct: 16 ITTEDEKSVFAVLLED-DSVKEIVLSGNTIGTEAARWLSENIASKKD-LEIAEFSDIFTG 73
Query: 196 RPEEEALEVINMFSSAL-EGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDG 254
R ++E E + + AL + +L + LS NA G L LE L+L N+G
Sbjct: 74 RVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNG 133
Query: 255 ISEEA----AQAILELIPSTEKLKVLHFHNNMTG----DEGAVAI-SEIVKHSPALEDFR 305
+ +A A+A+ EL + + + + G + G++ ++ + L +
Sbjct: 134 LGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVK 193
Query: 306 CSSTRIGAEG-GIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLS 363
I EG L + L C LK LDL+DN F AL+ L ++P+L E+ L+
Sbjct: 194 MVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252
>UNIPROTKB|E2R9L3 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0050830
"defense response to Gram-positive bacterium" evidence=IEA]
[GO:0050700 "CARD domain binding" evidence=IEA] [GO:0046330
"positive regulation of JNK cascade" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042228 "interleukin-8 biosynthetic process"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IEA] [GO:0032755 "positive regulation
of interleukin-6 production" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0016045 "detection of bacterium"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IEA]
InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209 SMART:SM00114
GO:GO:0005737 GO:GO:0016045 GO:GO:0006917 GO:GO:0050830
GO:GO:0035556 GO:GO:0043123 GO:GO:0070374 GO:GO:0046330
GO:GO:0016323 GO:GO:0032755 GO:GO:0006919 GO:GO:0051092
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0032760
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0002606 OMA:NDYGVRE
GO:GO:0042228 GeneTree:ENSGT00660000095240 EMBL:AAEX03009404
Ensembl:ENSCAFT00000004933 NextBio:20856994 Uniprot:E2R9L3
Length = 964
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 56/241 (23%), Positives = 101/241 (41%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
L+L +N L + GVR L + L L L + I++ + + E + + L L +
Sbjct: 719 LDLDNNNLNDYGVRE---LQPCFSRLTVLRLSVNQITDSGVKVLYEELTKYKILTFLGLY 775
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
+N D GA ++ I+ L + +I +EGG LA A+ + + ++ + N
Sbjct: 776 SNQITDVGARYVARILDECKGLTHLKLGENKITSEGGKCLALAVRNSSSILEIGMWGNRI 835
Query: 340 GVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXX 399
G E A +E L P LT + L++ SL + L N++
Sbjct: 836 GDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQRNT-SLRIFWLTKNELDDE 894
Query: 400 XXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGAR 459
Q L L L +N++ +G + +L++ G + EI L+ N +K A+
Sbjct: 895 VAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQKNTG-ITEICLNGNLIKPEEAK 953
Query: 460 L 460
+
Sbjct: 954 V 954
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 40/146 (27%), Positives = 69/146 (47%)
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVL 276
L +L L N + + G R +L L L L + I+ E + + + ++ + +
Sbjct: 769 LTFLGLYSNQITDVGARYVARILDECKGLTHLKLGENKITSEGGKCLALAVRNSSSILEI 828
Query: 277 HFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRD 336
N GDEGA A +E +++ P+L + + I EGG +LA+AL + T L+ L
Sbjct: 829 GMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQRNTSLRIFWLTK 888
Query: 337 NMFGVEAGVALSEVLPAFPDLTEVYL 362
N E +L+E+L L ++L
Sbjct: 889 NELDDEVAESLAEMLKVNQTLKHLWL 914
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 53/185 (28%), Positives = 90/185 (48%)
Query: 160 FSNKSFGLGASRVAAPILRLIKDQLTEVDLSDF-IAGRPEE-EALEVINMFSSALEGSQL 217
+SN+ +GA R A IL K LT + L + I + AL V N SS LE
Sbjct: 775 YSNQITDVGA-RYVARILDECKG-LTHLKLGENKITSEGGKCLALAVRNS-SSILE---- 827
Query: 218 RYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLH 277
+ + N +G++G +AF L++ +L L L +GIS E +++ + + L++
Sbjct: 828 --IGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQRNTSLRIFW 885
Query: 278 FHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDN 337
N DE A +++E++K + L+ +I A+G LA AL + T + ++ L N
Sbjct: 886 LTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQKNTGITEICLNGN 945
Query: 338 MFGVE 342
+ E
Sbjct: 946 LIKPE 950
Score = 122 (48.0 bits), Expect = 0.00065, P = 0.00065
Identities = 38/137 (27%), Positives = 62/137 (45%)
Query: 215 SQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLK 274
S+L L LS N + + GV+ L L L L ++ I++ A+ + ++ + L
Sbjct: 739 SRLTVLRLSVNQITDSGVKVLYEELTKYKILTFLGLYSNQITDVGARYVARILDECKGLT 798
Query: 275 VLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDL 334
L N EG ++ V++S ++ + RIG EG A A+AL L L L
Sbjct: 799 HLKLGENKITSEGGKCLALAVRNSSSILEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSL 858
Query: 335 RDNMFGVEAGVALSEVL 351
N E G +L++ L
Sbjct: 859 AFNGISTEGGKSLAQAL 875
>ZFIN|ZDB-GENE-081028-46 [details] [associations]
symbol:si:ch211-278p9.1 "si:ch211-278p9.1"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS51450
ZFIN:ZDB-GENE-081028-46 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR007111
PROSITE:PS50837 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00660000095240
EMBL:BX296541 IPI:IPI00882922 Ensembl:ENSDART00000144492
Uniprot:F1QNV7
Length = 1123
Score = 155 (59.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 48/149 (32%), Positives = 77/149 (51%)
Query: 206 NMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAIL 264
++FSS + LR L+LS+N L + GV+ LKS + LE L L + +S + +++
Sbjct: 758 SLFSSLQTSNSLRELDLSNNGLQDSGVKLLSDGLKSSHCQLEILRLTSCQLSGQCCESLS 817
Query: 265 ELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKAL 323
+ S+ ++ L NN D G +S+++K S LE R S + G LA AL
Sbjct: 818 SFLQSSNSMRELDLSNNDLQDSGVKLLSDVLKSSHCQLEILRLSGCMVTEVGCCFLASAL 877
Query: 324 G-QCTHLKKLDLRDNMFGVEAGVALSEVL 351
+HL++LDL N G +L+E+L
Sbjct: 878 RLNPSHLRELDLSYN----HPGESLAEML 902
>UNIPROTKB|Q5ZIY8 [details] [associations]
symbol:RNH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008428
"ribonuclease inhibitor activity" evidence=IEA] [GO:0032311
"angiogenin-PRI complex" evidence=IEA] [GO:0045765 "regulation of
angiogenesis" evidence=IEA] GO:GO:0005737 GO:GO:0045765
GO:GO:0008428 GO:GO:0032311 InterPro:IPR003590 SMART:SM00368
CTD:6050 eggNOG:NOG308334 HOGENOM:HOG000140402 HOVERGEN:HBG001059
KO:K16634 OrthoDB:EOG4DZ1VG GeneTree:ENSGT00670000097902
EMBL:AADN02030266 EMBL:AJ720646 IPI:IPI00573868
RefSeq:NP_001006473.1 UniGene:Gga.1426 STRING:Q5ZIY8
Ensembl:ENSGALT00000011181 GeneID:423111 KEGG:gga:423111
InParanoid:Q5ZIY8 OMA:AMAFANI NextBio:20825627 Uniprot:Q5ZIY8
Length = 456
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 82/358 (22%), Positives = 145/358 (40%)
Query: 143 LLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEAL 202
L G LT P S ++ N + + +L + LTE+ + D G + L
Sbjct: 71 LCKGLLT-PSCSLQKLWLQNCNLTSASCETLRSVLSA-QPSLTELHVGDNKLGTAGVKVL 128
Query: 203 -EVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQ 261
+ + + L+ QL Y L+ + V A A L+++ L+EL L N+ + + A +
Sbjct: 129 CQGLMNPNCKLQKLQLEYCELTADI-----VEALNAALQAKPTLKELSLSNNTLGDTAVK 183
Query: 262 AILE-LIPSTEKLKVLHFHN-NMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIAL 319
+ L+ ++ L++LH N +T D IS ++ P+L D +IG G L
Sbjct: 184 QLCRGLVEASCDLELLHLENCGITSDS-CRDISAVLSSKPSLLDLAVGDNKIGDTGLALL 242
Query: 320 AKAL--GQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXX 377
+ L C ++KL L D + LS V L EV L
Sbjct: 243 CQGLLHPNCK-IQKLWLWDCDLTSASCKDLSRVFSTKETLLEVSLIDNNLRDSGMEMLCQ 301
Query: 378 XXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLE 437
L+ L + +T + L L++ EN+L + G ++ + L
Sbjct: 302 ALKDPKAHLQELWVRECGLTAACCKAVSSVLSVNKHLQVLHIGENKLGNAGVEILCEGLL 361
Query: 438 EGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKH 495
+ + + L + A LA V V K L L+++ N + DEG+ ++ E +++
Sbjct: 362 HPNCNIHSLWLGNCDITAACCATLANVMVTKQNLTELDLSYNTLEDEGVMKLCEAVRN 419
Score = 127 (49.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 58/273 (21%), Positives = 110/273 (40%)
Query: 227 LGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILE--LIPSTEKLKVLHFHN-NMT 283
L + +++ + +L+EL L N+ + + + + + L PS L+ L N N+T
Sbjct: 35 LSSSNCKDLSSIIHTNPSLKELKLNNNELGDAGIEYLCKGLLTPSCS-LQKLWLQNCNLT 93
Query: 284 GDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKAL--GQCTHLKKLDLRDNMFGV 341
+ ++ P+L + ++G G L + L C L+KL L
Sbjct: 94 S-ASCETLRSVLSAQPSLTELHVGDNKLGTAGVKVLCQGLMNPNCK-LQKLQLEYCELTA 151
Query: 342 EAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXX 401
+ AL+ L A P L E+ LS + LE+L L IT
Sbjct: 152 DIVEALNAALQAKPTLKELSLSNNTLGDTAVKQLCRGLVEASCDLELLHLENCGITSDSC 211
Query: 402 XXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLL 461
L L + +N++ D G L+ + L + ++ ++ L + A + L
Sbjct: 212 RDISAVLSSKPSLLDLAVGDNKIGDTGLALLCQGLLHPNCKIQKLWLWDCDLTSASCKDL 271
Query: 462 AQVAVNKPGLKMLNINGNFIPDEGIDEVKEILK 494
++V K L +++ N + D G++ + + LK
Sbjct: 272 SRVFSTKETLLEVSLIDNNLRDSGMEMLCQALK 304
>DICTYBASE|DDB_G0292386 [details] [associations]
symbol:carmil "leucine-rich repeat-containing protein
(LRR)" species:44689 "Dictyostelium discoideum" [GO:0015629 "actin
cytoskeleton" evidence=TAS] [GO:0008290 "F-actin capping protein
complex" evidence=TAS] [GO:0005885 "Arp2/3 protein complex"
evidence=TAS] [GO:0045010 "actin nucleation" evidence=TAS]
[GO:0017024 "myosin I binding" evidence=TAS] [GO:0042995 "cell
projection" evidence=IEA] [GO:0031143 "pseudopodium" evidence=IEA]
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0292386
GO:GO:0045335 GenomeReviews:CM000155_GR GO:GO:0031143 GO:GO:0045010
EMBL:AAFI02000190 EMBL:AF388524 RefSeq:XP_629656.1
ProteinModelPortal:Q95VZ3 STRING:Q95VZ3 EnsemblProtists:DDB0185176
GeneID:8628720 KEGG:ddi:DDB_G0292386 eggNOG:NOG239526
InParanoid:Q95VZ3 OMA:EYFSMAV GO:GO:0017024 Uniprot:Q95VZ3
Length = 1050
Score = 152 (58.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 69/318 (21%), Positives = 126/318 (39%)
Query: 184 LTEVDLSDFIAGRPE--EEALEVINMFSSALE-GSQLRYLNLSHNALGEKGVRAFGALLK 240
++ ++ F G E A + I AL+ + + N ++ ++ +LK
Sbjct: 177 ISSKNIRSFNIGEIELPTSAGDTIRCLLGALKYNNYFKSFNFNNYTFNKEQFGYLAEVLK 236
Query: 241 SQNNLEELHLMNDGISEEAAQAILELIPSTEKLKV--LHFHNNMTGDEGAVAISEIVKHS 298
+ +E+L L N G+ + I + S + L + + NN D+G A S V S
Sbjct: 237 CNSTVEDLSLNNVGLKHDTMPIIATALSSNKNLALTAIDISNNQIEDKGMTAFSSYVASS 296
Query: 299 -PALEDFRCSSTRIGAEG-GI---ALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPA 353
+ S+T G + AL K + + L L+L N + LS L A
Sbjct: 297 LRGIASLDVSNTNCNKAGISVLTNALKKNIKMSSTLSYLNLSGNKMEADGSAGLSSFL-A 355
Query: 354 FPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQF 413
P+ + L+ CA L+ +D++ N +T
Sbjct: 356 SPNTLKT-LNISNTTPSMETIVGALVIGCA-ELKTIDISDNKLTKKEVPHLVRFIGASST 413
Query: 414 LTKLNLAENELQDEGAILIGKSLEEG-HGQLIEIDLSTNSMKRAGARLLAQVAVNK-PGL 471
L NL+ ++ E + ++ + Q + +DL N + AGAR+LA +A +K +
Sbjct: 414 LKHFNLSGTKVPVENLKELVVAITSNIYLQDVVLDLKNNDLGIAGARMLASLATDKLSNV 473
Query: 472 KMLNINGNFIPDEGIDEV 489
L+++ N DEG+ +
Sbjct: 474 IYLDVSENDFGDEGVSVI 491
>ZFIN|ZDB-GENE-080207-2 [details] [associations]
symbol:zgc:174944 "zgc:174944" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003877 Pfam:PF00622
ZFIN:ZDB-GENE-080207-2 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR007111
PROSITE:PS50837 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 OrthoDB:EOG4TTGHK eggNOG:NOG299368
HOVERGEN:HBG092009 HOGENOM:HOG000251591 EMBL:BC155301
IPI:IPI00884716 RefSeq:NP_001108057.1 UniGene:Dr.124687
ProteinModelPortal:A9JTD7 GeneID:100136867 KEGG:dre:100136867
NextBio:20789384 Uniprot:A9JTD7
Length = 1022
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 53/150 (35%), Positives = 81/150 (54%)
Query: 209 SSALEGSQ--LRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILE 265
SSAL+ S LR L+LS+N L + GV+ LKSQ+ L+ L LM ++ ++ +++
Sbjct: 673 SSALQSSNCVLRELDLSNNDLQDSGVKKLSDGLKSQHCKLDTLRLMTCKLTADSCESLSS 732
Query: 266 LIPSTE-KLKVLHFHNNMTGDEGAVAISEIVKH-SPALEDFRCSSTRIGAEGGIALAKAL 323
+ S+ L+ L NN D G +S+ +K + LE R S + EG L+ AL
Sbjct: 733 ALQSSNCVLRELDLSNNDLQDSGVKKLSDGLKSVNCKLETLRLSGCMVTEEGCGFLSSAL 792
Query: 324 -GQCTHLKKLDLRDNMFGVEAGVAL-SEVL 351
+HL++LDL N G ++GV L SE L
Sbjct: 793 TSNPSHLRELDLSYNHPG-DSGVKLLSEQL 821
Score = 120 (47.3 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 42/136 (30%), Positives = 71/136 (52%)
Query: 209 SSALEGSQ--LRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILE 265
SSAL+ S L L+LS+N L + GV+ LKSQ+ L+ L LM ++ + +++
Sbjct: 615 SSALQSSNCVLGELDLSNNDLQDSGVKLLSDGLKSQHCKLDTLRLMTCKLTVQCCESLSS 674
Query: 266 LIPSTE-KLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKAL 323
+ S+ L+ L NN D G +S+ +K L+ R + ++ A+ +L+ AL
Sbjct: 675 ALQSSNCVLRELDLSNNDLQDSGVKKLSDGLKSQHCKLDTLRLMTCKLTADSCESLSSAL 734
Query: 324 --GQCTHLKKLDLRDN 337
C L++LDL +N
Sbjct: 735 QSSNCV-LRELDLSNN 749
Score = 79 (32.9 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPG-LK 472
L +L+L+ N+LQD G + L+ + +L + LS + G L+ + P L+
Sbjct: 741 LRELDLSNNDLQDSGVKKLSDGLKSVNCKLETLRLSGCMVTEEGCGFLSSALTSNPSHLR 800
Query: 473 MLNINGNFIPDEGIDEVKEILK---HSLDVLGPLD 504
L+++ N D G+ + E L+ ++LD L LD
Sbjct: 801 ELDLSYNHPGDSGVKLLSEQLEDPNYTLDKLN-LD 834
>RGD|621398 [details] [associations]
symbol:Rnh1 "ribonuclease/angiogenin inhibitor 1" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0008428 "ribonuclease inhibitor activity" evidence=ISO]
[GO:0032311 "angiogenin-PRI complex" evidence=ISO] [GO:0045765
"regulation of angiogenesis" evidence=ISO] InterPro:IPR001611
PROSITE:PS51450 RGD:621398 GO:GO:0005737 GO:GO:0045765
GO:GO:0008428 GO:GO:0032311 InterPro:IPR003590 SMART:SM00368
HOGENOM:HOG000140402 HOVERGEN:HBG001059 KO:K16634 OrthoDB:EOG4DZ1VG
EMBL:X62528 EMBL:BC070501 IPI:IPI00959348 PIR:S20597
RefSeq:NP_001257691.1 RefSeq:NP_001257692.1 RefSeq:NP_620805.2
UniGene:Rn.3756 ProteinModelPortal:P29315 SMR:P29315 IntAct:P29315
STRING:P29315 PhosphoSite:P29315 PRIDE:P29315 GeneID:100360501
KEGG:rno:100360501 eggNOG:NOG299368 InParanoid:P29315
NextBio:623232 ArrayExpress:P29315 Genevestigator:P29315
GermOnline:ENSRNOG00000016416 Uniprot:P29315
Length = 456
Score = 145 (56.1 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 84/343 (24%), Positives = 141/343 (41%)
Query: 176 ILRLIKDQLTEV---DLSDFIAGRPEEEALEV-INMFSSA-----LEGSQ-----LRYLN 221
++RL LTEV D+ I P L + N A L+G Q ++ L+
Sbjct: 27 VVRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGLQNPTCKIQKLS 86
Query: 222 LSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTE-KLKVLHF-H 279
L + +L E G +L+S + L ELHL ++ + +E + + E + + +L+ L +
Sbjct: 87 LQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEY 146
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKAL-GQCTHLKKLDLRDNM 338
N+T ++ +++ P ++ S+ G L + L L+ L L +N
Sbjct: 147 CNLTATS-CEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKL-ENC 204
Query: 339 FGVEAGVA-LSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDIT 397
A L +V+ + L E+ L + L L L D+T
Sbjct: 205 GITSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVT 264
Query: 398 XXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAG 457
Q L +L+LA NEL+DEGA L+ +SL E QL + + T S+ A
Sbjct: 265 AEGCKDLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAAS 324
Query: 458 ARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKHSLDVL 500
V L L ++ N + D G+ E+ + L + VL
Sbjct: 325 CPHFCSVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVL 367
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 83/365 (22%), Positives = 138/365 (37%)
Query: 143 LLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEAL 202
L+L L P ++ N S V +LR + L E+ L+D G + L
Sbjct: 70 LVLQGLQNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLST-LRELHLNDNPLGDEGLKLL 128
Query: 203 -EVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQ 261
E + LE QL Y NL+ + ++L+ + + +EL L N+ E
Sbjct: 129 CEGLRDPQCRLEKLQLEYCNLTATSC-----EPLASVLRVKPDFKELVLSNNDFHEAGIH 183
Query: 262 AILE-LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALA 320
+ + L S +L+ L N + ++V +L++ S ++G G AL
Sbjct: 184 TLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALC 243
Query: 321 KAL--GQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXX 378
L C L+ L L D E L VL A L E+ L+
Sbjct: 244 SGLLLPSC-RLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNELKDEGAQLLCES 302
Query: 379 XXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEE 438
LE L + +T + L +L ++ N L D G + + K+L
Sbjct: 303 LLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGDSGVVELCKALGY 362
Query: 439 GHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKHSLD 498
L + L + +G LA V + L+ L+++ N + D G+ ++ E LK
Sbjct: 363 PDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMGDNGVLQLLESLKQPSC 422
Query: 499 VLGPL 503
+L L
Sbjct: 423 ILQQL 427
>RGD|2321956 [details] [associations]
symbol:LOC100360501 "ribonuclease inhibitor-like" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008428 "ribonuclease inhibitor activity" evidence=IEA]
[GO:0032311 "angiogenin-PRI complex" evidence=IEA] [GO:0045765
"regulation of angiogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2321956 GO:GO:0005737 GO:GO:0045765
GO:GO:0008428 GO:GO:0032311 EMBL:AC118351 EMBL:CH473953
InterPro:IPR003590 SMART:SM00368 KO:K16634 OMA:MEDRLQA
GeneTree:ENSGT00670000097902 RefSeq:NP_001257692.1
RefSeq:NP_620805.2 UniGene:Rn.3756 GeneID:100360501
KEGG:rno:100360501 EMBL:AB296102 IPI:IPI00959820
Ensembl:ENSRNOT00000022241 Uniprot:E2RUH2
Length = 456
Score = 145 (56.1 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 84/343 (24%), Positives = 141/343 (41%)
Query: 176 ILRLIKDQLTEV---DLSDFIAGRPEEEALEV-INMFSSA-----LEGSQ-----LRYLN 221
++RL LTEV D+ I P L + N A L+G Q ++ L+
Sbjct: 27 VVRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGLQNPTCKIQKLS 86
Query: 222 LSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTE-KLKVLHF-H 279
L + +L E G +L+S + L ELHL ++ + +E + + E + + +L+ L +
Sbjct: 87 LQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEY 146
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKAL-GQCTHLKKLDLRDNM 338
N+T ++ +++ P ++ S+ G L + L L+ L L +N
Sbjct: 147 CNLTATS-CEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKL-ENC 204
Query: 339 FGVEAGVA-LSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDIT 397
A L +V+ + L E+ L + L L L D+T
Sbjct: 205 GITSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVT 264
Query: 398 XXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAG 457
Q L +L+LA NEL+DEGA L+ +SL E QL + + T S+ A
Sbjct: 265 AEGCKDLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAAS 324
Query: 458 ARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKHSLDVL 500
V L L ++ N + D G+ E+ + L + VL
Sbjct: 325 CPHFCSVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVL 367
Score = 129 (50.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 81/356 (22%), Positives = 135/356 (37%)
Query: 143 LLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEAL 202
L+L L P ++ N S V +LR + L E+ L+D G + L
Sbjct: 70 LVLQGLQNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLST-LRELHLNDNPLGDEGLKLL 128
Query: 203 -EVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQ 261
E + LE QL Y NL+ + ++L+ + + +EL L N+ E
Sbjct: 129 CEGLRDPQCRLEKLQLEYCNLTATSC-----EPLASVLRVKPDFKELVLSNNDFHEAGIH 183
Query: 262 AILE-LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALA 320
+ + L S +L+ L N + ++V +L++ S ++G G AL
Sbjct: 184 TLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALC 243
Query: 321 KAL--GQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXX 378
L C L+ L L D E L VL A L E+ L+
Sbjct: 244 SGLLLPSC-RLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNELKDEGAQLLCES 302
Query: 379 XXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEE 438
LE L + +T + L +L ++ N L D G + + K+L
Sbjct: 303 LLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNRSLFELQMSSNPLGDSGVVELCKALGY 362
Query: 439 GHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILK 494
L + L + +G LA V + L+ L+++ N + D G+ ++ E LK
Sbjct: 363 PDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMGDTGVLQLLESLK 418
>MGI|MGI:2429397 [details] [associations]
symbol:Nod2 "nucleotide-binding oligomerization domain
containing 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0002227 "innate immune response in
mucosa" evidence=IMP] [GO:0002253 "activation of immune response"
evidence=IMP] [GO:0002282 "microglial cell activation involved in
immune response" evidence=ISO] [GO:0002367 "cytokine production
involved in immune response" evidence=ISO] [GO:0002381
"immunoglobulin production involved in immunoglobulin mediated
immune response" evidence=IMP] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IMP]
[GO:0002710 "negative regulation of T cell mediated immunity"
evidence=IMP] [GO:0002732 "positive regulation of dendritic cell
cytokine production" evidence=ISO] [GO:0002830 "positive regulation
of type 2 immune response" evidence=ISO] [GO:0002862 "negative
regulation of inflammatory response to antigenic stimulus"
evidence=IMP] [GO:0002925 "positive regulation of humoral immune
response mediated by circulating immunoglobulin" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006952 "defense response" evidence=TAS] [GO:0006954
"inflammatory response" evidence=TAS] [GO:0006965 "positive
regulation of biosynthetic process of antibacterial peptides active
against Gram-positive bacteria" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0008284 "positive regulation of
cell proliferation" evidence=ISO] [GO:0009595 "detection of biotic
stimulus" evidence=TAS] [GO:0009986 "cell surface" evidence=ISO]
[GO:0016045 "detection of bacterium" evidence=ISO] [GO:0016888
"endodeoxyribonuclease activity, producing 5'-phosphomonoesters"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032088 "negative
regulation of NF-kappaB transcription factor activity"
evidence=IMP] [GO:0032494 "response to peptidoglycan"
evidence=IMP;IDA] [GO:0032495 "response to muramyl dipeptide"
evidence=ISO;IDA;IMP] [GO:0032496 "response to lipopolysaccharide"
evidence=IMP] [GO:0032498 "detection of muramyl dipeptide"
evidence=ISO] [GO:0032500 "muramyl dipeptide binding" evidence=ISO]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IMP] [GO:0032695 "negative regulation of interleukin-12
production" evidence=IMP;IDA] [GO:0032701 "negative regulation of
interleukin-18 production" evidence=IMP] [GO:0032703 "negative
regulation of interleukin-2 production" evidence=IMP] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IMP] [GO:0032731 "positive regulation of interleukin-1
beta production" evidence=ISO] [GO:0032733 "positive regulation of
interleukin-10 production" evidence=IMP] [GO:0032735 "positive
regulation of interleukin-12 production" evidence=IDA;IMP]
[GO:0032740 "positive regulation of interleukin-17 production"
evidence=ISO] [GO:0032755 "positive regulation of interleukin-6
production" evidence=ISO;IGI;IDA;IMP] [GO:0032760 "positive
regulation of tumor necrosis factor production"
evidence=IGI;ISO;IDA;IMP] [GO:0032874 "positive regulation of
stress-activated MAPK cascade" evidence=ISO;IDA] [GO:0034136
"negative regulation of toll-like receptor 2 signaling pathway"
evidence=IMP] [GO:0035419 "activation of MAPK activity involved in
innate immune response" evidence=IDA] [GO:0035556 "intracellular
signal transduction" evidence=ISO] [GO:0042742 "defense response to
bacterium" evidence=ISO] [GO:0042834 "peptidoglycan binding"
evidence=ISO;TAS] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO;IDA] [GO:0043330 "response
to exogenous dsRNA" evidence=IMP] [GO:0043410 "positive regulation
of MAPK cascade" evidence=IMP] [GO:0043552 "positive regulation of
phosphatidylinositol 3-kinase activity" evidence=IMP] [GO:0044130
"negative regulation of growth of symbiont in host" evidence=IMP]
[GO:0045089 "positive regulation of innate immune response"
evidence=IMP] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IDA] [GO:0046330 "positive regulation of JNK
cascade" evidence=ISO;IDA] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=IMP] [GO:0050700 "CARD
domain binding" evidence=ISO] [GO:0050718 "positive regulation of
interleukin-1 beta secretion" evidence=ISO;IDA] [GO:0050731
"positive regulation of peptidyl-tyrosine phosphorylation"
evidence=IMP] [GO:0050766 "positive regulation of phagocytosis"
evidence=IMP] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IGI;IMP] [GO:0050871 "positive regulation of B
cell activation" evidence=ISO] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=ISO;IMP]
[GO:0051259 "protein oligomerization" evidence=TAS] [GO:0051353
"positive regulation of oxidoreductase activity" evidence=IDA]
[GO:0051770 "positive regulation of nitric-oxide synthase
biosynthetic process" evidence=IMP] [GO:0052033
"pathogen-associated molecular pattern dependent induction by
symbiont of host innate immune response" evidence=ISO] [GO:0060585
"positive regulation of prostaglandin-endoperoxide synthase
activity" evidence=IDA] [GO:0070374 "positive regulation of ERK1
and ERK2 cascade" evidence=IDA] [GO:0070431 "nucleotide-binding
oligomerization domain containing 2 signaling pathway"
evidence=ISO] [GO:0071224 "cellular response to peptidoglycan"
evidence=IMP] [GO:0071608 "macrophage inflammatory protein-1 alpha
production" evidence=IMP] [GO:0090022 "regulation of neutrophil
chemotaxis" evidence=IMP] [GO:2000110 "negative regulation of
macrophage apoptotic process" evidence=IDA] [GO:2000363 "positive
regulation of prostaglandin-E synthase activity" evidence=IDA]
InterPro:IPR001315 InterPro:IPR018228 Pfam:PF00619 PROSITE:PS50209
MGI:MGI:2429397 GO:GO:0051259 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0019901 GO:GO:0009986 GO:GO:0016045
GO:GO:0002381 GO:GO:0032689 GO:GO:0002862 GO:GO:0050830
GO:GO:0035556 GO:GO:0043123 GO:GO:0032496 GO:GO:0006954
GO:GO:0070374 GO:GO:0046330 GO:GO:0032755 GO:GO:0045747
GO:GO:0050731 GO:GO:0050766 GO:GO:0032720 GO:GO:0044130
Reactome:REACT_107772 GO:GO:0035419 GO:GO:0051092 GO:GO:0031398
GO:GO:0032088 GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR011029
SUPFAM:SSF47986 GO:GO:0016888 GO:GO:0031982 GO:GO:0008180
GO:GO:0006965 GO:GO:0002227 GO:GO:0042834 GO:GO:0032695
GO:GO:0032760 GO:GO:0050679 GO:GO:0050700 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0043330 GO:GO:0002606 GO:GO:0032735
GO:GO:0043552 GO:GO:0051770 GO:GO:2000110 GO:GO:0032733
GO:GO:0002830 GO:GO:0032703 GO:GO:0060585 GO:GO:0090022
GO:GO:0002925 GO:GO:0070431 GO:GO:0032740 GO:GO:0050871
GO:GO:0034136 GeneTree:ENSGT00660000095240 eggNOG:NOG248107
HOGENOM:HOG000113814 GO:GO:0032500 GO:GO:0071224 GO:GO:0002367
GO:GO:0032498 GO:GO:0071608 GO:GO:0032701 GO:GO:0002710
GO:GO:2000363 HOVERGEN:HBG050792 OMA:QYECDEI EMBL:AF520774
EMBL:BC044774 IPI:IPI00223373 IPI:IPI00230403 UniGene:Mm.222633
ProteinModelPortal:Q8K3Z0 SMR:Q8K3Z0 DIP:DIP-46115N STRING:Q8K3Z0
PhosphoSite:Q8K3Z0 PRIDE:Q8K3Z0 Ensembl:ENSMUST00000054324
Ensembl:ENSMUST00000109634 Bgee:Q8K3Z0 Genevestigator:Q8K3Z0
Uniprot:Q8K3Z0
Length = 1020
Score = 149 (57.5 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 37/134 (27%), Positives = 70/134 (52%)
Query: 215 SQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLK 274
+ L++L N++G+KG +A ++ NL+ L L+ + I A+A+ ++ + L+
Sbjct: 879 TSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLE 938
Query: 275 VLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDL 334
L N DEG +++E +K + L+ + S+ I G AL +AL + + + ++ L
Sbjct: 939 ELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALSRNSAILEVWL 998
Query: 335 RDNMFGVEAGVALS 348
R N F +E LS
Sbjct: 999 RGNTFSLEEIQTLS 1012
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 43/141 (30%), Positives = 67/141 (47%)
Query: 211 ALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPST 270
AL QL+ L L +N L + + LL + N L + N+ I+ A+ + + + S
Sbjct: 819 ALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSN 878
Query: 271 EKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLK 330
LK L F N GD+G A++E+V L+ IG+ G ALA L + L+
Sbjct: 879 TSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLE 938
Query: 331 KLDLRDNMFGVEAGVALSEVL 351
+L L +N E +L+E L
Sbjct: 939 ELCLEENHICDEGVYSLAEGL 959
Score = 132 (51.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 38/143 (26%), Positives = 67/143 (46%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
L + +N + G LKS +L+ L + + ++ QA+ E++ + LK L
Sbjct: 856 LRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLV 915
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
N G GA A++ +++ + +LE+ I EG +LA+ L + + LK L L +N
Sbjct: 916 GNNIGSMGAEALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGI 975
Query: 340 GVEAGVALSEVLPAFPDLTEVYL 362
AL + L + EV+L
Sbjct: 976 TYRGAEALLQALSRNSAILEVWL 998
>ZFIN|ZDB-GENE-070912-120 [details] [associations]
symbol:si:ch211-156p11.1 "si:ch211-156p11.1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-070912-120
GO:GO:0005524 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00690000101971 EMBL:BX927329 EMBL:CR936376
IPI:IPI00868161 Ensembl:ENSDART00000105988 Bgee:F1R8I8
Uniprot:F1R8I8
Length = 871
Score = 148 (57.2 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 53/154 (34%), Positives = 77/154 (50%)
Query: 203 EVINMFSSALEG--SQLRYLNLSHNALGEKGVRAFGALL-KSQNNLEELHLMNDGISEEA 259
E + +SAL+ S LR LNLS+N LG+ GV+ LL K Q LE+LHL N I+EE
Sbjct: 720 EACSAVTSALKSNPSHLRELNLSYNKLGDSGVKNLSYLLMKPQFKLEKLHLCNCSITEEQ 779
Query: 260 AQAILELIPSTEK-LKVLHFHNNMTGDEGAVAISEIV-KHSPALED---FRCSSTRIGAE 314
+ + S L+ L+ N D G +S+++ K LE ++CS T +
Sbjct: 780 CVILTSALKSNPSHLRELNLSCNELADSGVKNLSDLLMKPQFRLEKLHLYKCSITEKQCK 839
Query: 315 GGIALAKAL-GQCTHLKKLDLRDNMFGVEAGVAL 347
L AL +HL++L+L +N GV L
Sbjct: 840 ---ILTSALKSNPSHLRELNLSENQIR-NTGVNL 869
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 72/276 (26%), Positives = 113/276 (40%)
Query: 209 SSALEG--SQLRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILE 265
+SAL S L LNL N G+ GV+ LL+ + L+ L ++ ++E Q + E
Sbjct: 496 TSALRSNPSHLIELNLGGNDPGQSGVKELTNLLQDPHCTLKTLRFLSSA-ADEICQHVAE 554
Query: 266 LIPSTEKLKV-LHFHNNMTGDEGAVAISEIV--KHSPALE-DFRCSSTRIGAEGGIALAK 321
++ L L+ N+ GD +S ++ KH RC S I + L
Sbjct: 555 IVGKNPLLLTELNLSNHKLGDTRVNQLSALLQDKHCKFNTLILRCCS--ITEQQCEILTS 612
Query: 322 AL-GQCTHLKKLDLRDNMFGVEAGVA-LSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXX 379
AL +HL++LDL N +E+GV LS++L E
Sbjct: 613 ALKSNPSHLRELDLSQNK--LESGVKNLSDLLKNHQCKLEKLNLCKCSITKEQCEILTSA 670
Query: 380 XXCAPS-LEVLDLAGNDITXXXXXXXXXXXXXXQF-LTKLNLAENELQDEGAILIGKSLE 437
PS L LDL+ N I L L L+ E+ DE + +L+
Sbjct: 671 LKSNPSYLRELDLSENQIRNTGLNLLCDVLKDSHCRLQTLRLSSCEMTDEACSAVTSALK 730
Query: 438 EGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
L E++LS N + +G + L+ + + KP K+
Sbjct: 731 SNPSHLRELNLSYNKLGDSGVKNLSYLLM-KPQFKL 765
>RGD|1562269 [details] [associations]
symbol:Nod1 "nucleotide-binding oligomerization domain
containing 1" species:10116 "Rattus norvegicus" [GO:0002606
"positive regulation of dendritic cell antigen processing and
presentation" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006917 "induction of apoptosis"
evidence=IEA;ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0016045 "detection of bacterium"
evidence=IEA;ISO] [GO:0016323 "basolateral plasma membrane"
evidence=IEA;ISO] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA;ISO] [GO:0032760 "positive regulation of
tumor necrosis factor production" evidence=IEA;ISO] [GO:0032874
"positive regulation of stress-activated MAPK cascade"
evidence=ISO] [GO:0035556 "intracellular signal transduction"
evidence=IEA;ISO] [GO:0042228 "interleukin-8 biosynthetic process"
evidence=IEA;ISO] [GO:0042742 "defense response to bacterium"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=IEA;ISO]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA;ISO] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA;ISO] [GO:0050700 "CARD domain binding"
evidence=IEA;ISO] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IEA;ISO] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA;ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA;ISO] InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209
RGD:1562269 GO:GO:0005737 GO:GO:0016045 GO:GO:0006917 GO:GO:0050830
GO:GO:0035556 GO:GO:0043123 GO:GO:0070374 GO:GO:0046330
GO:GO:0016323 GO:GO:0032755 GO:GO:0006919 GO:GO:0051092
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0032760
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0002606 CTD:10392
KO:K08727 OMA:NDYGVRE OrthoDB:EOG4WH8K2 GO:GO:0042228
GeneTree:ENSGT00660000095240 EMBL:CH474011 IPI:IPI00209456
RefSeq:NP_001102706.1 UniGene:Rn.53929 Ensembl:ENSRNOT00000014324
GeneID:500133 KEGG:rno:500133 UCSC:RGD:1562269 NextBio:705213
Uniprot:D4ADT7
Length = 953
Score = 156 (60.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 55/241 (22%), Positives = 104/241 (43%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
L+L +N L + GVR L + L + L + I++ + + E + + + L +
Sbjct: 708 LDLDNNNLNDYGVRE---LQPCFSRLTVIRLSVNQITDMGVKVLCEELTKYKIVTFLGLY 764
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
NN D GA +++I+ L + RI +EGG +A+A+ T + ++ + N
Sbjct: 765 NNQITDIGARYVAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQI 824
Query: 340 GVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXX 399
G E A +E L P LT + L++ +L ++ L N++
Sbjct: 825 GDEGAKAFAEALRDHPSLTTLSLAFNGISPEGGKSLAQALKQNT-TLTIIWLTKNELNDE 883
Query: 400 XXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGAR 459
Q L L L +N + EG + ++L++ + + EI L+ N +K A+
Sbjct: 884 AAECFAEMLRVNQTLKHLWLIQNHITAEGTAQLARALQK-NTTITEICLNGNLIKPEEAK 942
Query: 460 L 460
+
Sbjct: 943 V 943
Score = 146 (56.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 40/144 (27%), Positives = 67/144 (46%)
Query: 219 YLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHF 278
+L L +N + + G R +L L L L + I+ E + + + + ++ + +
Sbjct: 760 FLGLYNNQITDIGARYVAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGM 819
Query: 279 HNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNM 338
N GDEGA A +E ++ P+L + I EGG +LA+AL Q T L + L N
Sbjct: 820 WGNQIGDEGAKAFAEALRDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLTKNE 879
Query: 339 FGVEAGVALSEVLPAFPDLTEVYL 362
EA +E+L L ++L
Sbjct: 880 LNDEAAECFAEMLRVNQTLKHLWL 903
Score = 131 (51.2 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 40/149 (26%), Positives = 69/149 (46%)
Query: 215 SQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLK 274
S+L + LS N + + GV+ L + L L N+ I++ A+ + +++ L
Sbjct: 728 SRLTVIRLSVNQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLT 787
Query: 275 VLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDL 334
L N EG +++ VK+S ++ + +IG EG A A+AL L L L
Sbjct: 788 HLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLSL 847
Query: 335 RDNMFGVEAGVALSEVLPAFPDLTEVYLS 363
N E G +L++ L LT ++L+
Sbjct: 848 AFNGISPEGGKSLAQALKQNTTLTIIWLT 876
Score = 38 (18.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 1 MDSTTETLQHHALSVKLWPPSQSTRLMLVQRM 32
+D +T L H +V ++ + + ML+QR+
Sbjct: 184 LDHSTGVLNEHGETVFVFGDAGVGKSMLLQRL 215
>UNIPROTKB|F1P9K0 [details] [associations]
symbol:NOD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090022 "regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071608 "macrophage inflammatory protein-1 alpha
production" evidence=IEA] [GO:0071224 "cellular response to
peptidoglycan" evidence=IEA] [GO:0070431 "nucleotide-binding
oligomerization domain containing 2 signaling pathway"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0050871
"positive regulation of B cell activation" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0050766 "positive regulation of phagocytosis"
evidence=IEA] [GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0050718 "positive regulation of
interleukin-1 beta secretion" evidence=IEA] [GO:0050700 "CARD
domain binding" evidence=IEA] [GO:0046330 "positive regulation of
JNK cascade" evidence=IEA] [GO:0044130 "negative regulation of
growth of symbiont in host" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042834
"peptidoglycan binding" evidence=IEA] [GO:0034136 "negative
regulation of toll-like receptor 2 signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032740 "positive
regulation of interleukin-17 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=IEA] [GO:0032701 "negative
regulation of interleukin-18 production" evidence=IEA] [GO:0032695
"negative regulation of interleukin-12 production" evidence=IEA]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IEA] [GO:0032500 "muramyl dipeptide binding" evidence=IEA]
[GO:0032498 "detection of muramyl dipeptide" evidence=IEA]
[GO:0032496 "response to lipopolysaccharide" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0031982 "vesicle" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016045
"detection of bacterium" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0006965
"positive regulation of biosynthetic process of antibacterial
peptides active against Gram-positive bacteria" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0002925 "positive regulation of humoral immune
response mediated by circulating immunoglobulin" evidence=IEA]
[GO:0002862 "negative regulation of inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0002830 "positive regulation
of type 2 immune response" evidence=IEA] [GO:0002710 "negative
regulation of T cell mediated immunity" evidence=IEA] [GO:0002381
"immunoglobulin production involved in immunoglobulin mediated
immune response" evidence=IEA] [GO:0002367 "cytokine production
involved in immune response" evidence=IEA] [GO:0002227 "innate
immune response in mucosa" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] InterPro:IPR001611 InterPro:IPR001315 Pfam:PF00619
PROSITE:PS50209 PROSITE:PS51450 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 GO:GO:0016045 GO:GO:0002381
GO:GO:0032689 GO:GO:0002862 GO:GO:0050830 GO:GO:0032496
GO:GO:0070374 GO:GO:0032755 GO:GO:0045747 GO:GO:0050731
GO:GO:0050766 GO:GO:0032720 GO:GO:0044130 GO:GO:0035419
GO:GO:0031398 GO:GO:0032088 GO:GO:0050718 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0031982 GO:GO:0008180
GO:GO:0006965 GO:GO:0002227 GO:GO:0042834 GO:GO:0032695
GO:GO:0032760 GO:GO:0050679 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0043330 GO:GO:0002606 GO:GO:0032735 GO:GO:0043552
GO:GO:0051770 GO:GO:2000110 GO:GO:0032733 GO:GO:0002830
GO:GO:0032703 GO:GO:0032874 GO:GO:0060585 GO:GO:0090022
GO:GO:0002925 GO:GO:0070431 GO:GO:0032740 GO:GO:0050871
GO:GO:0034136 GeneTree:ENSGT00660000095240 GO:GO:0032500
GO:GO:0071224 GO:GO:0002367 GO:GO:0032498 GO:GO:0071608
GO:GO:0032701 GO:GO:0002710 GO:GO:2000363 OMA:QYECDEI
EMBL:AAEX03001616 Ensembl:ENSCAFT00000015589 Uniprot:F1P9K0
Length = 1013
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 48/160 (30%), Positives = 74/160 (46%)
Query: 204 VINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAI 263
+ + AL QL+ L L +N L + + LL + N L L N+ I+ AQA+
Sbjct: 805 ICKLIEHALHCEQLQKLALFNNKLTDGCAHSMARLLACKQNFLALRLGNNRITAAGAQAL 864
Query: 264 LELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKAL 323
E + + L+ L F N GDEGA A++E + +L IG+ G ALA L
Sbjct: 865 AEGLRANTSLQFLGFWGNKVGDEGAQALAEALGDHQSLRWLSLVGNDIGSVGARALALML 924
Query: 324 GQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLS 363
+ L++L L +N E +L++ L L + LS
Sbjct: 925 EKNVALEELCLEENHLQDEGVCSLAKGLERNSSLKVLKLS 964
Score = 139 (54.0 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 63/282 (22%), Positives = 104/282 (36%)
Query: 211 ALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPST 270
A+ G + +L L+ +G A +L+ L L ++ + + + +L+P
Sbjct: 731 AVRGLTVGHLKLTFCGVGPPECAALAFVLRHLRRPVALQLDHNSVGDIGVE---QLLPCL 787
Query: 271 EKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLK 330
K L+ +N D G + E H L+ + ++ ++A+ L +
Sbjct: 788 SVCKALYLRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSMARLLACKQNFL 847
Query: 331 KLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSY-XXXXXXXXXXXXXXXXXCAPSLEVL 389
L L +N AL+E L A L +L + SL L
Sbjct: 848 ALRLGNNRITAAGAQALAEGLRANTSLQ--FLGFWGNKVGDEGAQALAEALGDHQSLRWL 905
Query: 390 DLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLS 449
L GNDI L +L L EN LQDEG + K LE + L + LS
Sbjct: 906 SLVGNDIGSVGARALALMLEKNVALEELCLEENHLQDEGVCSLAKGLER-NSSLKVLKLS 964
Query: 450 TNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKE 491
N + GA L Q + + + GN E ++ + +
Sbjct: 965 NNCITYLGAEGLLQALEKNDTILEVWLRGNTFSLEEMERLSQ 1006
>ZFIN|ZDB-GENE-050208-7 [details] [associations]
symbol:ppp1r37 "protein phosphatase 1, regulatory
subunit 37" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0019902 "phosphatase binding"
evidence=ISS] [GO:0010923 "negative regulation of phosphatase
activity" evidence=ISS] [GO:0004864 "protein phosphatase inhibitor
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-050208-7 GO:GO:0004864 GO:GO:0010923 GO:GO:0019902
GeneTree:ENSGT00640000091171 eggNOG:NOG259751 HOGENOM:HOG000074153
OrthoDB:EOG4SJ5DQ EMBL:CR381630 EMBL:BC124387 EMBL:BC141792
IPI:IPI00495067 RefSeq:NP_001073636.1 UniGene:Dr.20530
UniGene:Dr.76864 ProteinModelPortal:Q1L994
Ensembl:ENSDART00000086541 Ensembl:ENSDART00000139327 GeneID:562516
NextBio:20884451 Bgee:Q1L994 Uniprot:Q1L994
Length = 919
Score = 145 (56.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 52/247 (21%), Positives = 106/247 (42%)
Query: 219 YLNLSHNA-LGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLH 277
+LN+S+N +G +G +A +++ N+L+ L N + + +A + + + L VLH
Sbjct: 314 HLNISNNKHIGTRGWQAAAHMMRKTNSLQYLDARNTPLLDHSAPFVARALRISSSLTVLH 373
Query: 278 FHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRI-GAEGGIALAKALGQCTHLKKLDLRD 336
N+ + ++ +K + L + + ++ G + L L +++ LDLR+
Sbjct: 374 LENSGISGRPLMLLATALKMNMNLRELYLAENKLNGLQDSAQLGNLLKFNYNIQILDLRN 433
Query: 337 NMFGVEAGVA-LSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGND 395
N +++G+A + E L + + SLE L+L N
Sbjct: 434 NHI-LDSGLAYVCEGLKEQRKGLVTLVLWNNQLTHNGMGYLAAALPFTQSLETLNLGHNA 492
Query: 396 ITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKR 455
+ + + +L LA +L EGA+ I + + E +L+ +D+ N +K
Sbjct: 493 VGNEGVHKLKDGLISNRSILRLGLASTKLSCEGAVAIAEFIAESP-RLLRLDMRENEIKT 551
Query: 456 AGARLLA 462
G L+
Sbjct: 552 GGLMALS 558
Score = 126 (49.4 bits), Expect = 0.00023, P = 0.00023
Identities = 33/133 (24%), Positives = 68/133 (51%)
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQNN-LEELHLMNDGISEEAAQAILELIPSTEKLKV 275
++ L+L +N + + G+ LK Q L L L N+ ++ + +P T+ L+
Sbjct: 426 IQILDLRNNHILDSGLAYVCEGLKEQRKGLVTLVLWNNQLTHNGMGYLAAALPFTQSLET 485
Query: 276 LHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLR 335
L+ +N G+EG + + + + ++ +ST++ EG +A+A+ + + L +LD+R
Sbjct: 486 LNLGHNAVGNEGVHKLKDGLISNRSILRLGLASTKLSCEGAVAIAEFIAESPRLLRLDMR 545
Query: 336 DNMFGVEAGVALS 348
+N +ALS
Sbjct: 546 ENEIKTGGLMALS 558
>ZFIN|ZDB-GENE-081028-33 [details] [associations]
symbol:si:ch211-236p5.2 "si:ch211-236p5.2"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS51450
ZFIN:ZDB-GENE-081028-33 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR007111
PROSITE:PS50837 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00660000095240
EMBL:BX248131 IPI:IPI00900963 Ensembl:ENSDART00000145668
Uniprot:F1QEN0
Length = 1284
Score = 146 (56.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 48/133 (36%), Positives = 70/133 (52%)
Query: 209 SSALEGSQ-LRYLNLSHNALGEKGVRAFGALLKS-QNNLEELHLMNDGISEEAAQAILEL 266
SS+L+ S LR L+LSHN L + GV+ LKS Q LE L L + ++ + +++ L
Sbjct: 939 SSSLQSSNSLRELDLSHNDLQDSGVKLLSDGLKSSQCQLEILKLADCNLTGQCCESLSSL 998
Query: 267 IPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKALG- 324
+ S+ L+ L N D G +S+ +K S LE R S + EG LA AL
Sbjct: 999 LQSSNSLRELVLSLNDLQDSGVKLLSDGLKSSHCHLEILRLSGCMVTEEGCCFLASALRL 1058
Query: 325 QCTHLKKLDLRDN 337
+HL++LDL N
Sbjct: 1059 NPSHLRELDLSYN 1071
>ZFIN|ZDB-GENE-081103-38 [details] [associations]
symbol:si:ch211-271g18.1 "si:ch211-271g18.1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003877 Pfam:PF00622 ZFIN:ZDB-GENE-081103-38
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR007111 PROSITE:PS50837 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104633 EMBL:BX323072 IPI:IPI00608254
PRIDE:E9QCK3 Ensembl:ENSDART00000138768 Uniprot:E9QCK3
Length = 1057
Score = 144 (55.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 53/150 (35%), Positives = 79/150 (52%)
Query: 209 SSALEGSQ--LRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILE 265
SSAL+ S LR L+LS+N L + GV+ LKS N LE L L+ ++ ++ +++
Sbjct: 709 SSALQSSNCVLRELDLSNNDLQDSGVKLLSDGLKSPNCKLETLRLVMCNLTVQSCESLSS 768
Query: 266 LIPSTE-KLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKAL 323
+ S+ L+ L NN D G +S+ +K LE R S + EG L+ AL
Sbjct: 769 ALQSSNCVLRELDLSNNDLQDSGVKLLSDGLKSQHCKLETLRLSGCMVTEEGCGFLSSAL 828
Query: 324 -GQCTHLKKLDLRDNMFGVEAGVAL-SEVL 351
+HL++LDL N G ++GV L SE L
Sbjct: 829 TSNPSHLRELDLSYNHPG-DSGVKLLSEQL 857
>SGD|S000004848 [details] [associations]
symbol:RNA1 "GTPase activating protein (GAP) for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0016072 "rRNA
metabolic process" evidence=IMP] [GO:0006404 "RNA import into
nucleus" evidence=IMP] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006399 "tRNA metabolic process" evidence=IMP] [GO:0005098 "Ran
GTPase activator activity" evidence=IDA;IMP] [GO:0006606 "protein
import into nucleus" evidence=IDA] [GO:0000054 "ribosomal subunit
export from nucleus" evidence=IMP] [GO:0006407 "rRNA export from
nucleus" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
SGD:S000004848 GO:GO:0016021 GO:GO:0005829 GO:GO:0005634
EMBL:BK006946 GO:GO:0006606 GO:GO:0006348 EMBL:Z49939 GO:GO:0006399
GO:GO:0016072 GO:GO:0000054 GO:GO:0006404 GO:GO:0006407
eggNOG:COG5238 KO:K14319 GeneTree:ENSGT00440000039203 OMA:AEETAYV
GO:GO:0005098 HOGENOM:HOG000195026 OrthoDB:EOG40S3QS EMBL:M27143
EMBL:M27142 EMBL:X17376 EMBL:X57160 PIR:A32492 RefSeq:NP_013962.1
ProteinModelPortal:P11745 SMR:P11745 DIP:DIP-2509N IntAct:P11745
MINT:MINT-558123 STRING:P11745 PaxDb:P11745 PeptideAtlas:P11745
EnsemblFungi:YMR235C GeneID:855275 KEGG:sce:YMR235C CYGD:YMR235c
NextBio:978897 Genevestigator:P11745 GermOnline:YMR235C
Uniprot:P11745
Length = 407
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 62/257 (24%), Positives = 111/257 (43%)
Query: 123 QTVFDISGGQRGFIEEEEAKLLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILR---L 179
+ V+ ISG ++ K L L + T++ S + G AS A +
Sbjct: 13 EQVYSISGKALKLTTSDDIKPYLEELAAL-KTCTKLDLSGNTIGTEASEALAKCIAENTQ 71
Query: 180 IKDQLTEVDLSDFIAGRPEEEALEVIN-MFSSALEGSQLRYLNLSHNALGEKGVRAFGAL 238
+++ L EV+ +D R +E ++ + + L+ L +NLS NA G + +
Sbjct: 72 VRESLVEVNFADLYTSRLVDEVVDSLKFLLPVLLKCPHLEIVNLSDNAFGLRTIELLEDY 131
Query: 239 LKSQNNLEELHLMNDGIS----EEAAQAILELIPSTEK-----LKVLHFHNNMTGDEGAV 289
+ N++ L L N+G+ E +A+ L + + L+ N + AV
Sbjct: 132 IAHAVNIKHLILSNNGMGPFAGERIGKALFHLAQNKKAASKPFLETFICGRNRLENGSAV 191
Query: 290 AISEIVK-HSPALEDFRCSSTRIGAEGGIALAK-ALGQCTHLKKLDLRDNMFGVEAGVAL 347
++ +K HS L+ + I +G L L +L+ LDL+DN F A + L
Sbjct: 192 YLALGLKSHSEGLKVVKLYQNGIRPKGVATLIHYGLQYLKNLEILDLQDNTFTKHASLIL 251
Query: 348 SEVLPAFPD-LTEVYLS 363
++ LP + D L E+ L+
Sbjct: 252 AKALPTWKDSLFELNLN 268
>RGD|1565052 [details] [associations]
symbol:Lrrc34 "leucine rich repeat containing 34" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] RGD:1565052 CTD:151827
eggNOG:NOG309390 HOGENOM:HOG000007976 HOVERGEN:HBG080754
OrthoDB:EOG4H9XM3 EMBL:BC097432 IPI:IPI00372167
RefSeq:NP_001038161.1 UniGene:Rn.30636 ProteinModelPortal:Q4V8D9
PhosphoSite:Q4V8D9 GeneID:499589 KEGG:rno:499589 UCSC:RGD:1565052
InParanoid:Q4V8D9 NextBio:703364 Genevestigator:Q4V8D9
Uniprot:Q4V8D9
Length = 415
Score = 138 (53.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 55/263 (20%), Positives = 111/263 (42%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
+++ +N +G+ G LL+ Q N+ L+LM + I E + I + + + LK L
Sbjct: 79 VDVRYNLIGDVGAYYAAKLLQKQPNITYLNLMFNDIGPEGGELIAKALQKNKTLKYLRMT 138
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDL-RDNM 338
N + G + + +++ + +LE +G + IA + L Q +K ++L R +
Sbjct: 139 GNKIENTGGMLFAAMLQMNSSLEKLDLGDCDLGLQSVIAFSTVLTQNKAIKGINLNRPIL 198
Query: 339 FGV--EAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDI 396
+G E+ V + + L E+++ + +L LD++ N I
Sbjct: 199 YGEQEESTVHIGHMSKQNHVLVELHMCKHGMKNYGIQQLCNALHSNS-TLRYLDVSCNKI 257
Query: 397 TXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRA 456
T L L+L+ N +++ GA + ++L + L + + +N ++
Sbjct: 258 TRDGMVFLADVLKSNSTLEVLDLSFNRIENAGAKYLSETLTSHNRSLKALSVVSNKIEGE 317
Query: 457 GARLLAQVAVNKPGLKMLNINGN 479
G L+Q L + I GN
Sbjct: 318 GLVALSQSMNTNLVLSNIYIWGN 340
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 56/213 (26%), Positives = 93/213 (43%)
Query: 155 YTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSAL-E 213
Y R+ NK G AA +L++ L ++DL D G L+ + FS+ L +
Sbjct: 134 YLRMT-GNKIENTGGMLFAA-MLQM-NSSLEKLDLGDCDLG------LQSVIAFSTVLTQ 184
Query: 214 GSQLRYLNLSHNAL-GEKGVRA--FGALLKSQNNLEELHLMNDGISEEAAQAILELIPST 270
++ +NL+ L GE+ G + K + L ELH+ G+ Q + + S
Sbjct: 185 NKAIKGINLNRPILYGEQEESTVHIGHMSKQNHVLVELHMCKHGMKNYGIQQLCNALHSN 244
Query: 271 EKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTH-L 329
L+ L N +G V +++++K + LE S RI G L++ L L
Sbjct: 245 STLRYLDVSCNKITRDGMVFLADVLKSNSTLEVLDLSFNRIENAGAKYLSETLTSHNRSL 304
Query: 330 KKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYL 362
K L + N E VALS+ + L+ +Y+
Sbjct: 305 KALSVVSNKIEGEGLVALSQSMNTNLVLSNIYI 337
>ZFIN|ZDB-GENE-061108-4 [details] [associations]
symbol:nod2 "nucleotide-binding oligomerization
domain containing 2" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IMP] InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209
ZFIN:ZDB-GENE-061108-4 GO:GO:0042981 GO:GO:0042742 GO:GO:0005622
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00660000095240
CTD:64127 KO:K10165 EMBL:CU929130 IPI:IPI01023759
RefSeq:XP_697924.3 UniGene:Dr.93177 Ensembl:ENSDART00000148805
GeneID:777696 KEGG:dre:777696 NextBio:20924266 Bgee:F8W3K2
Uniprot:F8W3K2
Length = 980
Score = 142 (55.0 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 42/156 (26%), Positives = 70/156 (44%)
Query: 207 MFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILEL 266
+ +E + + L +N L + + F LLKS+ N L L N+ I+ A+ + E
Sbjct: 803 LLEKGIECENFQKIALFNNKLTDTCTQYFSCLLKSKQNFLALRLGNNNITSVGAEQLAEG 862
Query: 267 IPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQC 326
+ + L+ L N GD GA +++ + +S L +G+ G ALAK + Q
Sbjct: 863 LSYNQSLQFLGLWGNKVGDRGAEVLADALTNSKTLIWLSLVDNGVGSAGACALAKFIRQN 922
Query: 327 THLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYL 362
L++L L N E L E L + +V+L
Sbjct: 923 KSLEELWLNKNSICKEGVDCLIEALKMNTSVKKVWL 958
>MGI|MGI:1919077 [details] [associations]
symbol:Lrrc34 "leucine rich repeat containing 34"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1919077
CTD:151827 eggNOG:NOG309390 HOGENOM:HOG000007976 HOVERGEN:HBG080754
EMBL:AK005720 EMBL:BC100519 IPI:IPI00118820 RefSeq:NP_082217.1
UniGene:Mm.45373 ProteinModelPortal:Q9DAM1 SMR:Q9DAM1
PhosphoSite:Q9DAM1 PaxDb:Q9DAM1 PRIDE:Q9DAM1
Ensembl:ENSMUST00000029252 GeneID:71827 KEGG:mmu:71827
GeneTree:ENSGT00640000091171 InParanoid:Q9DAM1 OMA:HNRSLKA
OrthoDB:EOG4H9XM3 NextBio:334616 Bgee:Q9DAM1 CleanEx:MM_LRRC34
Genevestigator:Q9DAM1 GermOnline:ENSMUSG00000027702 Uniprot:Q9DAM1
Length = 415
Score = 137 (53.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 57/278 (20%), Positives = 117/278 (42%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
+++ +N +G+ G LL+ Q ++ L+LM + I E + I + + + LK L
Sbjct: 79 VDVRYNLIGDVGAFYAAKLLQKQPSITYLNLMFNDIGPEGGELIAKALHKNKTLKYLRMT 138
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDL-RDNM 338
N + G + + +++ + +LE +G + IA + L Q +K ++L R +
Sbjct: 139 GNKIENTGGMLFAAMLQMNSSLEKLDLGDCDLGLQCVIAFSTVLTQNQAIKGINLNRPIL 198
Query: 339 FGV--EAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDI 396
+G E+ V + +L L E+++ + SL LD++ N I
Sbjct: 199 YGEQEESTVHIGHMLKENHVLVELHMCKHGMKNYGLQQLCNALYLNS-SLRYLDVSCNKI 257
Query: 397 TXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRA 456
T L L+L+ N ++ GA + ++L + L + + +N ++
Sbjct: 258 TRDGMVFLADVLKSNTTLEVLDLSFNRIETAGAKYLSETLTSHNRSLKALSVVSNKIEGE 317
Query: 457 GARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILK 494
G L+Q L + I GN ++ +++K
Sbjct: 318 GLVALSQSMKTNLVLSNIYIWGNKFDEDTCVAYSDLIK 355
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 57/213 (26%), Positives = 94/213 (44%)
Query: 155 YTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEG 214
Y R+ NK G AA +L++ L ++DL D G L+ + FS+ L
Sbjct: 134 YLRMT-GNKIENTGGMLFAA-MLQM-NSSLEKLDLGDCDLG------LQCVIAFSTVLTQ 184
Query: 215 SQ-LRYLNLSHNAL-GEKGVRA--FGALLKSQNNLEELHLMNDGISEEAAQAILELIPST 270
+Q ++ +NL+ L GE+ G +LK + L ELH+ G+ Q + +
Sbjct: 185 NQAIKGINLNRPILYGEQEESTVHIGHMLKENHVLVELHMCKHGMKNYGLQQLCNALYLN 244
Query: 271 EKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTH-L 329
L+ L N +G V +++++K + LE S RI G L++ L L
Sbjct: 245 SSLRYLDVSCNKITRDGMVFLADVLKSNTTLEVLDLSFNRIETAGAKYLSETLTSHNRSL 304
Query: 330 KKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYL 362
K L + N E VALS+ + L+ +Y+
Sbjct: 305 KALSVVSNKIEGEGLVALSQSMKTNLVLSNIYI 337
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 54/225 (24%), Positives = 93/225 (41%)
Query: 282 MTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGV 341
+TG++ + +S+ +++ P + IG G AK L + + L+L N G
Sbjct: 58 ITGEDFWL-LSKTLRNQPCISGVDVRYNLIGDVGAFYAAKLLQKQPSITYLNLMFNDIGP 116
Query: 342 EAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXX-CAPSLEVLDLAGNDITXXX 400
E G +++ L + T YL SLE LDL D+
Sbjct: 117 EGGELIAKAL--HKNKTLKYLRMTGNKIENTGGMLFAAMLQMNSSLEKLDLGDCDLGLQC 174
Query: 401 XXXXXXXXXXXQFLTKLNLAENEL---QDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAG 457
Q + +NL L Q+E + IG L+E H L+E+ + + MK G
Sbjct: 175 VIAFSTVLTQNQAIKGINLNRPILYGEQEESTVHIGHMLKENH-VLVELHMCKHGMKNYG 233
Query: 458 ARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKHS--LDVL 500
+ L L+ L+++ N I +G+ + ++LK + L+VL
Sbjct: 234 LQQLCNALYLNSSLRYLDVSCNKITRDGMVFLADVLKSNTTLEVL 278
Score = 93 (37.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 29/113 (25%), Positives = 53/113 (46%)
Query: 239 LKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHS 298
L++Q + + + + I + A +L+ + L+ N G EG I++ + +
Sbjct: 70 LRNQPCISGVDVRYNLIGDVGAFYAAKLLQKQPSITYLNLMFNDIGPEGGELIAKALHKN 129
Query: 299 PALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVL 351
L+ R + +I GG+ A L + L+KLDL D G++ +A S VL
Sbjct: 130 KTLKYLRMTGNKIENTGGMLFAAMLQMNSSLEKLDLGDCDLGLQCVIAFSTVL 182
Score = 81 (33.6 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 23/85 (27%), Positives = 47/85 (55%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVN-KPGLK 472
L L+++ N++ +G + + L+ + L +DLS N ++ AGA+ L++ + LK
Sbjct: 247 LRYLDVSCNKITRDGMVFLADVLKS-NTTLEVLDLSFNRIETAGAKYLSETLTSHNRSLK 305
Query: 473 MLNINGNFIPDEGIDEVKEILKHSL 497
L++ N I EG+ + + +K +L
Sbjct: 306 ALSVVSNKIEGEGLVALSQSMKTNL 330
>UNIPROTKB|Q9HC29 [details] [associations]
symbol:NOD2 "Nucleotide-binding oligomerization
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0002227 "innate immune
response in mucosa" evidence=IEA] [GO:0002282 "microglial cell
activation involved in immune response" evidence=IEA] [GO:0002381
"immunoglobulin production involved in immunoglobulin mediated
immune response" evidence=IEA] [GO:0002710 "negative regulation of
T cell mediated immunity" evidence=IEA] [GO:0002732 "positive
regulation of dendritic cell cytokine production" evidence=IEA]
[GO:0002862 "negative regulation of inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0002925 "positive regulation
of humoral immune response mediated by circulating immunoglobulin"
evidence=IEA] [GO:0006965 "positive regulation of biosynthetic
process of antibacterial peptides active against Gram-positive
bacteria" evidence=IEA] [GO:0007584 "response to nutrient"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0032496 "response
to lipopolysaccharide" evidence=IEA] [GO:0032689 "negative
regulation of interferon-gamma production" evidence=IEA]
[GO:0032695 "negative regulation of interleukin-12 production"
evidence=IEA] [GO:0032701 "negative regulation of interleukin-18
production" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=IEA] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0032735 "positive regulation of interleukin-12 production"
evidence=IEA] [GO:0034136 "negative regulation of toll-like
receptor 2 signaling pathway" evidence=IEA] [GO:0043330 "response
to exogenous dsRNA" evidence=IEA] [GO:0044130 "negative regulation
of growth of symbiont in host" evidence=IEA] [GO:0050731 "positive
regulation of peptidyl-tyrosine phosphorylation" evidence=IEA]
[GO:0050766 "positive regulation of phagocytosis" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0052033 "pathogen-associated molecular pattern
dependent induction by symbiont of host innate immune response"
evidence=IEA] [GO:0071224 "cellular response to peptidoglycan"
evidence=IEA] [GO:0071608 "macrophage inflammatory protein-1 alpha
production" evidence=IEA] [GO:0090022 "regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IDA;TAS]
[GO:0050700 "CARD domain binding" evidence=IPI] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0009986 "cell surface"
evidence=IDA] [GO:0032740 "positive regulation of interleukin-17
production" evidence=IMP] [GO:0045087 "innate immune response"
evidence=NAS;TAS] [GO:0008180 "signalosome" evidence=IDA]
[GO:0002367 "cytokine production involved in immune response"
evidence=IMP] [GO:0032498 "detection of muramyl dipeptide"
evidence=IDA] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IMP;IDA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IDA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IDA]
[GO:0070431 "nucleotide-binding oligomerization domain containing 2
signaling pathway" evidence=IDA] [GO:0006952 "defense response"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0009595
"detection of biotic stimulus" evidence=TAS] [GO:0042834
"peptidoglycan binding" evidence=IDA] [GO:0051259 "protein
oligomerization" evidence=TAS] [GO:0032495 "response to muramyl
dipeptide" evidence=IDA] [GO:0032500 "muramyl dipeptide binding"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016045 "detection of bacterium" evidence=IDA] [GO:0031982
"vesicle" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0042742 "defense response to bacterium" evidence=IDA]
[GO:0035556 "intracellular signal transduction" evidence=IDA]
[GO:0050718 "positive regulation of interleukin-1 beta secretion"
evidence=IDA] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0002224 "toll-like receptor signaling pathway"
evidence=TAS] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0002756 "MyD88-independent
toll-like receptor signaling pathway" evidence=TAS] [GO:0007254
"JNK cascade" evidence=TAS] [GO:0008063 "Toll signaling pathway"
evidence=TAS] [GO:0034130 "toll-like receptor 1 signaling pathway"
evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling pathway"
evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=TAS] [GO:0035666 "TRIF-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0035872 "nucleotide-binding
domain, leucine rich repeat containing receptor signaling pathway"
evidence=TAS] [GO:0051403 "stress-activated MAPK cascade"
evidence=TAS] [GO:0070423 "nucleotide-binding oligomerization
domain containing signaling pathway" evidence=TAS] [GO:0032733
"positive regulation of interleukin-10 production" evidence=ISS]
[GO:0035419 "activation of MAPK activity involved in innate immune
response" evidence=ISS] [GO:0043552 "positive regulation of
phosphatidylinositol 3-kinase activity" evidence=ISS] [GO:0045747
"positive regulation of Notch signaling pathway" evidence=ISS]
[GO:0051353 "positive regulation of oxidoreductase activity"
evidence=ISS] [GO:0051770 "positive regulation of nitric-oxide
synthase biosynthetic process" evidence=ISS] [GO:0060585 "positive
regulation of prostaglandin-endoperoxide synthase activity"
evidence=ISS] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=ISS] [GO:2000110 "negative regulation of
macrophage apoptotic process" evidence=ISS] [GO:0002606 "positive
regulation of dendritic cell antigen processing and presentation"
evidence=ISS] [GO:0046645 "positive regulation of gamma-delta T
cell activation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0002830 "positive
regulation of type 2 immune response" evidence=IMP] [GO:2000363
"positive regulation of prostaglandin-E synthase activity"
evidence=ISS] [GO:0050871 "positive regulation of B cell
activation" evidence=IDA] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=IMP] [GO:0050727
"regulation of inflammatory response" evidence=IC] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IDA]
Reactome:REACT_6782 InterPro:IPR001611 InterPro:IPR001315
Pfam:PF00619 PROSITE:PS50209 PROSITE:PS51450 SMART:SM00114
GO:GO:0051259 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
Reactome:REACT_6900 GO:GO:0009986 GO:GO:0016045 GO:GO:0002381
GO:GO:0032689 GO:GO:0002862 GO:GO:0050830 GO:GO:0007254
GO:GO:0043123 GO:GO:0042742 Orphanet:206 GO:GO:0032496
GO:GO:0070374 GO:GO:0046330 GO:GO:0045087 GO:GO:0032755
GO:GO:0045747 GO:GO:0050731 GO:GO:0050766 GO:GO:0050727
GO:GO:0032720 GO:GO:0044130 GO:GO:0035419 GO:GO:0051092
GO:GO:0031398 GO:GO:0032088 GO:GO:0050718 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0031982 GO:GO:0006965
GO:GO:0002227 GO:GO:0042834 GO:GO:0032695 GO:GO:0032760
GO:GO:0002755 GO:GO:0008063 GO:GO:0034130 GO:GO:0034134
GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0050679
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0043330 GO:GO:0002606
GO:GO:0032735 GO:GO:0043552 GO:GO:0051770 GO:GO:2000110
GO:GO:0032733 GO:GO:0002830 GO:GO:0032703 GO:GO:0060585
GO:GO:0090022 GO:GO:0002925 GO:GO:0070431 GO:GO:0032740
Orphanet:771 GO:GO:0050871 GO:GO:0034136 CTD:64127 eggNOG:NOG248107
HOGENOM:HOG000113814 KO:K10165 OrthoDB:EOG4WM4T6 GO:GO:0032500
GO:GO:0071224 GO:GO:0002367 GO:GO:0032498 GO:GO:0071608
GO:GO:0032701 GO:GO:0002710 GO:GO:0046645 GO:GO:2000363
EMBL:AF178930 EMBL:AF385089 EMBL:AF385090 EMBL:AJ303140
IPI:IPI00005559 IPI:IPI00759531 RefSeq:NP_071445.1
UniGene:Hs.592072 ProteinModelPortal:Q9HC29 SMR:Q9HC29
DIP:DIP-41998N MINT:MINT-151071 STRING:Q9HC29 PhosphoSite:Q9HC29
DMDM:20137973 PaxDb:Q9HC29 PRIDE:Q9HC29 DNASU:64127
Ensembl:ENST00000300589 GeneID:64127 KEGG:hsa:64127 UCSC:uc002egl.1
GeneCards:GC16P050729 HGNC:HGNC:5331 MIM:186580 MIM:266600
MIM:605956 MIM:609464 neXtProt:NX_Q9HC29 Orphanet:90340
Orphanet:90341 PharmGKB:PA26074 HOVERGEN:HBG050792
InParanoid:Q9HC29 OMA:QYECDEI PhylomeDB:Q9HC29 BindingDB:Q9HC29
ChEMBL:CHEMBL1293266 GenomeRNAi:64127 NextBio:66012
ArrayExpress:Q9HC29 Bgee:Q9HC29 CleanEx:HS_NOD2
Genevestigator:Q9HC29 GermOnline:ENSG00000167207 Uniprot:Q9HC29
Length = 1040
Score = 147 (56.8 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 48/160 (30%), Positives = 72/160 (45%)
Query: 204 VINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAI 263
+ + AL QL+ L L +N L + + LL + N L L N+ I+ AQ +
Sbjct: 832 ICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITAAGAQVL 891
Query: 264 LELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKAL 323
E + L+ L F N GDEGA A++E + +L IG+ G ALA L
Sbjct: 892 AEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALML 951
Query: 324 GQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLS 363
+ L++L L +N E +L+E L L + LS
Sbjct: 952 AKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLS 991
Score = 130 (50.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 37/137 (27%), Positives = 68/137 (49%)
Query: 207 MFSSALEGS-QLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILE 265
+ + L G+ L++L N +G++G +A L +L L L+ + I AQA+
Sbjct: 890 VLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALAL 949
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQ 325
++ L+ L N DEG +++E +K + +L+ + S+ I G AL +AL +
Sbjct: 950 MLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQALER 1009
Query: 326 CTHLKKLDLRDNMFGVE 342
+ ++ LR N F +E
Sbjct: 1010 NDTILEVWLRGNTFSLE 1026
Score = 128 (50.1 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 60/280 (21%), Positives = 101/280 (36%)
Query: 211 ALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPST 270
A G + +L L+ ++G A +L+ L L + + + + +L+P
Sbjct: 758 AARGLNVGHLKLTFCSVGPTECAALAFVLQHLRRPVALQLDYNSVGDIGVE---QLLPCL 814
Query: 271 EKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLK 330
K L+ +N D G + E H L+ + ++ ++AK L +
Sbjct: 815 GVCKALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFL 874
Query: 331 KLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSY-XXXXXXXXXXXXXXXXXCAPSLEVL 389
L L +N L+E L L +L + SL L
Sbjct: 875 ALRLGNNYITAAGAQVLAEGLRGNTSLQ--FLGFWGNRVGDEGAQALAEALGDHQSLRWL 932
Query: 390 DLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLS 449
L GN+I L +L L EN LQDEG + + L++ I + LS
Sbjct: 933 SLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKI-LKLS 991
Query: 450 TNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEV 489
N + GA L Q + + + GN E +D++
Sbjct: 992 NNCITYLGAEALLQALERNDTILEVWLRGNTFSLEEVDKL 1031
Score = 41 (19.5 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 130 GGQRGFIEEEEAKLLLG 146
GG EEE A +LLG
Sbjct: 5 GGSASHDEEERASVLLG 21
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 123 QTVFDISGGQRGFIEEEEAKLLLGPLTEPGNSYTRIC--FSNKSFGLGA 169
+ + D++ +RGF+ + E + P+ P R+ + K+ GL A
Sbjct: 150 ENMLDLAW-ERGFVSQYECDEIRLPIFTPSQRARRLLDLATVKANGLAA 197
>UNIPROTKB|P10775 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 InterPro:IPR025875 Pfam:PF12799
InterPro:IPR003590 SMART:SM00368 HOVERGEN:HBG001059 EMBL:M58700
PIR:A31857 UniGene:Ssc.6413 PDB:1DFJ PDB:2BNH PDBsum:1DFJ
PDBsum:2BNH ProteinModelPortal:P10775 SMR:P10775 IntAct:P10775
PRIDE:P10775 EvolutionaryTrace:P10775 Uniprot:P10775
Length = 456
Score = 136 (52.9 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 66/282 (23%), Positives = 120/282 (42%)
Query: 216 QLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILE--LIPSTEKL 273
+++ L+L + +L E G + L+S L ELHL ++ + + + + E L P
Sbjct: 81 KIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLE 140
Query: 274 KVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCT-HLKKL 332
K+ + +T ++ +++ + AL++ S+ IG G L + L L+ L
Sbjct: 141 KLQLEYCRLTA-ASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETL 199
Query: 333 DLRDNMFGVEAGVA-LSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDL 391
L +N A L ++ + L E+ L A L+ L L
Sbjct: 200 RL-ENCGLTPANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWL 258
Query: 392 AGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTN 451
DIT + L +L+LA N+L DEGA L+ +SL + QL + + +
Sbjct: 259 WECDITASGCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSC 318
Query: 452 SMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEIL 493
S+ A + ++ + L L ++ N + D GI E+ + L
Sbjct: 319 SLTAACCQHVSLMLTQNKHLLELQLSSNKLGDSGIQELCQAL 360
Score = 127 (49.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 50/227 (22%), Positives = 95/227 (41%)
Query: 265 ELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALG 324
EL+P ++ +V+ + +E I ++ +P+L + + +G G + + L
Sbjct: 17 ELLPLLQQYEVVRLDDCGLTEEHCKDIGSALRANPSLTELCLRTNELGDAGVHLVLQGLQ 76
Query: 325 QCT-HLKKLDLRDNMFGVEAGVA-LSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXC 382
T ++KL L+ N EAG L L + P L E++LS
Sbjct: 77 SPTCKIQKLSLQ-NCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDP 135
Query: 383 APSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQ 442
LE L L +T + L +L ++ N++ + GA ++G+ L + Q
Sbjct: 136 QCHLEKLQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQ 195
Query: 443 LIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEV 489
L + L + A + L + ++ L+ L++ N + D GI E+
Sbjct: 196 LETLRLENCGLTPANCKDLCGIVASQASLRELDLGSNGLGDAGIAEL 242
>ZFIN|ZDB-GENE-110913-19 [details] [associations]
symbol:si:dkey-156k2.3 "si:dkey-156k2.3"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 ZFIN:ZDB-GENE-110913-19 GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR007111 PROSITE:PS50837
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101971 EMBL:BX324126 EMBL:BX465205
EMBL:BX957251 Ensembl:ENSDART00000150746 Uniprot:H0WFD4
Length = 1252
Score = 141 (54.7 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 70/266 (26%), Positives = 113/266 (42%)
Query: 209 SSALEGSQ--LRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILE 265
SSAL+ S LR L+LS+N L + GV+ LKS + LE L L ++ ++ +++
Sbjct: 824 SSALQSSNCVLRELDLSNNGLQDSGVKLLSDGLKSPDFKLETLSLQGCNLTTQSFESLSS 883
Query: 266 LIPSTE-KLKVLHFHNNMTGDEGAVAISEIVKHSP--ALEDFRCSSTRIGAEGGIALAKA 322
+ S+ L+ L NN +S+ +K SP LE R ++ + +L+ A
Sbjct: 884 ALQSSNCVLRELDLSNNDLQHSAVKLLSDGLK-SPNCKLETLRLQWCKLTVQSCESLSSA 942
Query: 323 L--GQCTHLKKLDLRDNMFGVEAGVAL-SEVLPAFPDLTEVY-LSYXXXXXXXXXXXXXX 378
L C L++LDL +N ++GV L S+ L E L+
Sbjct: 943 LQSSNCV-LRELDLSNNDLQ-DSGVKLHSDGLKTVNSKLETLRLAMCNLTVQCCESLSSA 1000
Query: 379 XXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQF-LTKLNLAENELQDEGAILIGKSLE 437
L LDL+ ND+ L L L+ + +EG + +L
Sbjct: 1001 LQSSNYVLRELDLSNNDLQDSGVKKLSDGLKSLNCKLETLRLSGCMVTEEGCGFLSSALT 1060
Query: 438 EGHGQLIEIDLSTNSMKRAGARLLAQ 463
L E+DLS N +G +LL++
Sbjct: 1061 SNPSHLRELDLSYNHPGDSGVKLLSE 1086
>MGI|MGI:1341839 [details] [associations]
symbol:Nod1 "nucleotide-binding oligomerization domain
containing 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO;RCA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0006952 "defense response" evidence=RCA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016045 "detection of bacterium" evidence=ISO]
[GO:0016323 "basolateral plasma membrane" evidence=ISO] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IGI;IMP]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IGI;IMP] [GO:0032874 "positive regulation of
stress-activated MAPK cascade" evidence=IDA] [GO:0035556
"intracellular signal transduction" evidence=ISO] [GO:0042228
"interleukin-8 biosynthetic process" evidence=ISO] [GO:0042742
"defense response to bacterium" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043123 "positive regulation
of I-kappaB kinase/NF-kappaB cascade" evidence=ISO;IDA] [GO:0045087
"innate immune response" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IDA] [GO:0050700 "CARD domain
binding" evidence=ISO] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=IGI;IMP] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IDA] InterPro:IPR001315 Pfam:PF00619
PROSITE:PS50209 MGI:MGI:1341839 GO:GO:0005524 GO:GO:0005737
GO:GO:0016045 GO:GO:0006917 GO:GO:0050830 GO:GO:0035556
GO:GO:0016324 GO:GO:0043123 GO:GO:0070374 GO:GO:0046330
GO:GO:0045087 GO:GO:0016323 GO:GO:0032755 GO:GO:0006919
GO:GO:0051092 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0032760 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0002606
CTD:10392 eggNOG:NOG275503 HOGENOM:HOG000113813 HOVERGEN:HBG050793
KO:K08727 OMA:NDYGVRE OrthoDB:EOG4WH8K2 GO:GO:0042228 EMBL:AK082663
EMBL:AK089662 EMBL:BC042670 EMBL:BC043670 IPI:IPI00221820
RefSeq:NP_001164478.1 RefSeq:NP_766317.1 UniGene:Mm.28498
ProteinModelPortal:Q8BHB0 SMR:Q8BHB0 DIP:DIP-59535N STRING:Q8BHB0
PhosphoSite:Q8BHB0 PaxDb:Q8BHB0 PRIDE:Q8BHB0
Ensembl:ENSMUST00000060655 Ensembl:ENSMUST00000168172 GeneID:107607
KEGG:mmu:107607 GeneTree:ENSGT00660000095240 InParanoid:Q8BHB0
NextBio:359142 Bgee:Q8BHB0 Genevestigator:Q8BHB0
GermOnline:ENSMUSG00000038058 Uniprot:Q8BHB0
Length = 953
Score = 148 (57.2 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 54/241 (22%), Positives = 102/241 (42%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
L+L +N L + GV+ L + L + L + I++ + + E + + + L +
Sbjct: 708 LDLDNNNLNDYGVQE---LQPCFSRLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLY 764
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
NN D GA +++I+ L+ + RI +EGG +A A+ T + + + N
Sbjct: 765 NNQITDIGARYVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQI 824
Query: 340 GVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXX 399
G E A +E L P LT + L++ +L V+ L N++
Sbjct: 825 GDEGAKAFAEALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNT-TLTVIWLTKNELNDE 883
Query: 400 XXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGAR 459
Q L L L +N + +G + ++L++ + EI L+ N +K A+
Sbjct: 884 SAECFAEMLRVNQTLRHLWLIQNRITAKGTAQLARALQKNTA-ITEICLNGNLIKPEEAK 942
Query: 460 L 460
+
Sbjct: 943 V 943
Score = 143 (55.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 40/144 (27%), Positives = 67/144 (46%)
Query: 219 YLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHF 278
+L L +N + + G R +L L+ L L + I+ E + + + ++ + +
Sbjct: 760 FLGLYNNQITDIGARYVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGM 819
Query: 279 HNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNM 338
N GDEGA A +E +K P+L + I EGG +LA+AL Q T L + L N
Sbjct: 820 WGNQIGDEGAKAFAEALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNE 879
Query: 339 FGVEAGVALSEVLPAFPDLTEVYL 362
E+ +E+L L ++L
Sbjct: 880 LNDESAECFAEMLRVNQTLRHLWL 903
Score = 138 (53.6 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 42/149 (28%), Positives = 69/149 (46%)
Query: 215 SQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLK 274
S+L + LS N + + GV+ L + L L N+ I++ A+ + +++ LK
Sbjct: 728 SRLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLK 787
Query: 275 VLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDL 334
L N EG ++ VK+S ++ D +IG EG A A+AL L L L
Sbjct: 788 HLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSL 847
Query: 335 RDNMFGVEAGVALSEVLPAFPDLTEVYLS 363
N E G +L++ L LT ++L+
Sbjct: 848 AFNGISPEGGKSLAQALKQNTTLTVIWLT 876
Score = 38 (18.4 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 1 MDSTTETLQHHALSVKLWPPSQSTRLMLVQRM 32
+D +T L H +V ++ + + ML+QR+
Sbjct: 184 LDHSTGVLNEHGETVFVFGDAGVGKSMLLQRL 215
>ZFIN|ZDB-GENE-110913-10 [details] [associations]
symbol:si:ch73-289h5.4 "si:ch73-289h5.4"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003877
Pfam:PF00622 ZFIN:ZDB-GENE-110913-10 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR007111
PROSITE:PS50837 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 InterPro:IPR003590 SMART:SM00368
EMBL:CABZ01013139 EMBL:CU694442 IPI:IPI00897710
Ensembl:ENSDART00000113296 GeneTree:ENSGT00700000104633
Uniprot:E7EXM5
Length = 1172
Score = 140 (54.3 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 73/281 (25%), Positives = 121/281 (43%)
Query: 209 SSALEGSQ--LRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILE 265
SSAL+ S LR L+LS+N L + GV+ LK N LE L ++ + +++
Sbjct: 707 SSALQSSNCVLRELDLSNNDLQDSGVKLLSDGLKDPNCKLETLRFFMCKLTVNSCKSLSS 766
Query: 266 LIPSTE-KLKVLHFHNNMTGDEGAVAISEIVKHSP--ALEDFRCSSTRIGAEGGIALAKA 322
+ S+ L+ L +N D G +S+ +K SP LE R ++ + +L+ A
Sbjct: 767 ALQSSNCVLRELDLGDNDLQDSGVKLLSDGLK-SPNCKLEILRFVMCKLTVDSCESLSSA 825
Query: 323 L--GQCTHLKKLDLRDNMFGVEAGVA-LSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXX 379
L C L++LDL DN ++GV L + L + P+ L +
Sbjct: 826 LQSSNCV-LRELDLSDNDLQ-DSGVKHLFDELKS-PNCKLETLRFVMCKLTVDSCESLSL 882
Query: 380 XXCAPS--LEVLDLAGNDITXXXXXXXXXXXXXXQF-LTKLNLAENELQDEGAILIGKSL 436
+P+ L LDL+ ND+ L L L+ + +EG + +L
Sbjct: 883 ALQSPNCVLRELDLSDNDLQDSGVKLLSDGLKSPNCNLEILRLSGCMVTEEGCGFLSSAL 942
Query: 437 EEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNIN 477
L E+DLS N +G +LL++ + P + +N
Sbjct: 943 SSNPSHLRELDLSYNHPGDSGVKLLSE-KLEDPNYTLDKLN 982
>UNIPROTKB|Q53B88 [details] [associations]
symbol:NOD2 "Nucleotide-binding oligomerization
domain-containing protein 2" species:9580 "Hylobates lar"
[GO:0002367 "cytokine production involved in immune response"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0016045 "detection of bacterium" evidence=ISS]
[GO:0019899 "enzyme binding" evidence=ISS] [GO:0019901 "protein
kinase binding" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032495 "response to muramyl dipeptide" evidence=ISS]
[GO:0032498 "detection of muramyl dipeptide" evidence=ISS]
[GO:0032500 "muramyl dipeptide binding" evidence=ISS] [GO:0032740
"positive regulation of interleukin-17 production" evidence=ISS]
[GO:0035556 "intracellular signal transduction" evidence=ISS]
[GO:0042742 "defense response to bacterium" evidence=ISS]
[GO:0042834 "peptidoglycan binding" evidence=ISS] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=ISS] [GO:0050700 "CARD domain binding" evidence=ISS]
[GO:0050718 "positive regulation of interleukin-1 beta secretion"
evidence=ISS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISS] [GO:0008180
"signalosome" evidence=ISS] InterPro:IPR001611 InterPro:IPR001315
Pfam:PF00619 PROSITE:PS50209 PROSITE:PS51450 SMART:SM00114
GO:GO:0005829 GO:GO:0005886 GO:GO:0005524 GO:GO:0019901
GO:GO:0009986 GO:GO:0016045 GO:GO:0042981 GO:GO:0035556
GO:GO:0043123 GO:GO:0042742 GO:GO:0051092 GO:GO:0050718
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0031982
GO:GO:0042834 GO:GO:0050700 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0032740 GO:GO:0032500 GO:GO:0002367 GO:GO:0032498
HOVERGEN:HBG050792 EMBL:AY594161 EMBL:AY594150 EMBL:AY594151
EMBL:AY594152 EMBL:AY594153 EMBL:AY594154 EMBL:AY594155
EMBL:AY594156 EMBL:AY594157 EMBL:AY594158 EMBL:AY594159
EMBL:AY594160 ProteinModelPortal:Q53B88 Uniprot:Q53B88
Length = 1040
Score = 147 (56.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 48/160 (30%), Positives = 72/160 (45%)
Query: 204 VINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAI 263
+ + AL QL+ L L +N L + + LL + N L L N+ I+ AQ +
Sbjct: 832 ICKLIECALHCEQLQKLVLFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITPAGAQVL 891
Query: 264 LELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKAL 323
E + L+ L F N GDEGA A++E + +L IG+ G ALA L
Sbjct: 892 AEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALML 951
Query: 324 GQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLS 363
+ L++L L +N E +L+E L L + LS
Sbjct: 952 AKNVMLEELCLEENHIQDEGVCSLAEGLKKNSSLKILKLS 991
Score = 132 (51.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 37/137 (27%), Positives = 69/137 (50%)
Query: 207 MFSSALEGS-QLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILE 265
+ + L G+ L++L N +G++G +A L +L L L+ + I AQA+
Sbjct: 890 VLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALAL 949
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQ 325
++ L+ L N DEG +++E +K + +L+ + S+ I G AL +AL +
Sbjct: 950 MLAKNVMLEELCLEENHIQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAKALLQALER 1009
Query: 326 CTHLKKLDLRDNMFGVE 342
+ ++ LR N+F +E
Sbjct: 1010 NDTILEVWLRGNIFSLE 1026
Score = 39 (18.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 130 GGQRGFIEEEEAKLLLG 146
GG EEE A +LLG
Sbjct: 5 GGSVSHDEEERASVLLG 21
Score = 38 (18.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 125 VFDISGGQRGFIEEEEAKLLLGPLTEPGNSYTRIC--FSNKSFGLGA 169
V D++ +RGF+ + E + P+ P R+ + K+ GL A
Sbjct: 152 VLDLAW-ERGFVSQYECDEIRLPIFTPSQRARRLLDLATVKANGLAA 197
>UNIPROTKB|G3MYV6 [details] [associations]
symbol:Bt.111263 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GeneTree:ENSGT00700000104427 EMBL:DAAA02047820
EMBL:DAAA02047821 EMBL:DAAA02047822 EMBL:DAAA02047823
EMBL:DAAA02047824 EMBL:DAAA02047825 EMBL:DAAA02047826
Ensembl:ENSBTAT00000066236 Uniprot:G3MYV6
Length = 1037
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 67/262 (25%), Positives = 104/262 (39%)
Query: 244 NLEELHLMNDGISEEAAQAI-LELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALE 302
NL +L L N +S + + L+L +L+ L + +M EG + +++ L
Sbjct: 719 NLSQLDLSNSKLSTASMMRLCLKLGNPQCRLQKLAW-KSMAPVEGLRKLGLLLRGDRHLT 777
Query: 303 DFRCSSTRIGAEGGIALAKALGQCT-HLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVY 361
SS + A + + LG LK L L A L+ +L + P LT +
Sbjct: 778 HLDLSSNSLDAAVSRGVFRMLGHSACGLKYLWLEKGNLSAAACEDLASLLTSTPRLTRLC 837
Query: 362 LSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAE 421
L L+ L+L ++ + LT LNL
Sbjct: 838 LGLNPLGDEGVQLLCGSLTRPECVLQRLELWCCRLSTPSCRHLSDALLRSRSLTHLNLRR 897
Query: 422 NELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFI 481
N L D G L+ +L L ++LS S+ AG R LA + LK+L++ N I
Sbjct: 898 NSLGDGGVKLLSSALGRADCALQSLNLSHCSLTVAGCRELAHALKHNGHLKILDVGNNDI 957
Query: 482 PDEGIDEVKEILKHSLDVLGPL 503
DEG+ E+ +LK VL L
Sbjct: 958 QDEGVKELCSVLKSPSCVLQTL 979
>RGD|1595870 [details] [associations]
symbol:Ppp1r37 "protein phosphatase 1, regulatory subunit 37"
species:10116 "Rattus norvegicus" [GO:0004864 "protein phosphatase
inhibitor activity" evidence=IEA] [GO:0010923 "negative regulation
of phosphatase activity" evidence=IEA;ISO;ISS] [GO:0019902
"phosphatase binding" evidence=IEA;ISO;ISS] InterPro:IPR001611
PROSITE:PS51450 RGD:1595870 GO:GO:0004864 EMBL:CH473979
GO:GO:0010923 GO:GO:0019902 CTD:284352 eggNOG:NOG259751
HOGENOM:HOG000074153 HOVERGEN:HBG108102 OrthoDB:EOG4SJ5DQ
EMBL:BC166755 IPI:IPI00191328 RefSeq:NP_001100952.1 UniGene:Rn.7032
ProteinModelPortal:B2RYF1 GeneID:308398 KEGG:rno:308398
UCSC:RGD:1595870 NextBio:658768 ArrayExpress:B2RYF1
Genevestigator:B2RYF1 Uniprot:B2RYF1
Length = 710
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 65/296 (21%), Positives = 120/296 (40%)
Query: 183 QLTEVDLSDFIAGRPEEEAL-EVINMFSSALEGSQLRYLNLSHNA-LGEKGVRAFGALLK 240
Q VDL AL ++I + SA +LN+S N +G +G +A +++
Sbjct: 139 QFKVVDLEQTNLDEDGASALFDMIEYYESAT------HLNISFNKHIGTRGWQAAAHMMR 192
Query: 241 SQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA 300
+ L+ L N + + +A + + L VLH N + ++ +K +
Sbjct: 193 KTSCLQYLDARNTPLLDHSAPFVARALRIRSSLAVLHLENASLSGRPLMLLATALKMNMN 252
Query: 301 LEDFRCSSTRI-GAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVA-LSEVLPAFPDLT 358
L++ + ++ G + L L L+ LDLR+N +++G+A + E L
Sbjct: 253 LQELYLADNKLNGLQDSAQLGNLLKFNCSLQILDLRNNHV-LDSGLAYICEGLKEQRKGL 311
Query: 359 EVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLN 418
+ + SLE L+L N I + + +L
Sbjct: 312 VTLVLWNNQLTHTGMAFLGMALPHTQSLETLNLGHNPIGNEGVRNLKNGLISNRSVLRLG 371
Query: 419 LAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLA-QVAVNKPGLKM 473
LA +L EGA+ + + + E +L+ +DL N +K G L+ + VN L++
Sbjct: 372 LASTKLTCEGAVAVAEFIAESP-RLLRLDLRENEIKTGGLMALSLALKVNHSLLRL 426
Score = 121 (47.7 bits), Expect = 0.00057, P = 0.00057
Identities = 44/186 (23%), Positives = 84/186 (45%)
Query: 169 ASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALE-GSQLRYLNLSHNAL 227
AS P++ L ++L + + L+ + L+ L+ L+L +N +
Sbjct: 233 ASLSGRPLMLLATALKMNMNLQELYLADNKLNGLQDSAQLGNLLKFNCSLQILDLRNNHV 292
Query: 228 GEKGVRAFGALLKSQNN-LEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDE 286
+ G+ LK Q L L L N+ ++ + +P T+ L+ L+ +N G+E
Sbjct: 293 LDSGLAYICEGLKEQRKGLVTLVLWNNQLTHTGMAFLGMALPHTQSLETLNLGHNPIGNE 352
Query: 287 GAVAISE-IVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGV 345
G + ++ + L +ST++ EG +A+A+ + + L +LDLR+N +
Sbjct: 353 GVRNLKNGLISNRSVLR-LGLASTKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLM 411
Query: 346 ALSEVL 351
ALS L
Sbjct: 412 ALSLAL 417
>RGD|1306368 [details] [associations]
symbol:Nod2 "nucleotide-binding oligomerization domain
containing 2" species:10116 "Rattus norvegicus" [GO:0002227 "innate
immune response in mucosa" evidence=IEA;ISO] [GO:0002253
"activation of immune response" evidence=ISO] [GO:0002282
"microglial cell activation involved in immune response"
evidence=IDA] [GO:0002367 "cytokine production involved in immune
response" evidence=IEA;ISO] [GO:0002381 "immunoglobulin production
involved in immunoglobulin mediated immune response"
evidence=IEA;ISO] [GO:0002606 "positive regulation of dendritic
cell antigen processing and presentation" evidence=ISO] [GO:0002710
"negative regulation of T cell mediated immunity" evidence=IEA;ISO]
[GO:0002732 "positive regulation of dendritic cell cytokine
production" evidence=IDA] [GO:0002830 "positive regulation of type
2 immune response" evidence=IEA;ISO] [GO:0002862 "negative
regulation of inflammatory response to antigenic stimulus"
evidence=IEA;ISO] [GO:0002925 "positive regulation of humoral
immune response mediated by circulating immunoglobulin"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006965 "positive regulation of biosynthetic
process of antibacterial peptides active against Gram-positive
bacteria" evidence=IEA;ISO] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008180 "signalosome" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IDA] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0016045 "detection of bacterium" evidence=IEA;ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=ISO] [GO:0031982 "vesicle"
evidence=IEA;ISO] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0032494
"response to peptidoglycan" evidence=ISO] [GO:0032495 "response to
muramyl dipeptide" evidence=ISO;IDA] [GO:0032496 "response to
lipopolysaccharide" evidence=IEA;ISO] [GO:0032498 "detection of
muramyl dipeptide" evidence=IEA;ISO] [GO:0032500 "muramyl dipeptide
binding" evidence=ISO;IDA] [GO:0032689 "negative regulation of
interferon-gamma production" evidence=IEA;ISO] [GO:0032695
"negative regulation of interleukin-12 production"
evidence=IEA;ISO] [GO:0032701 "negative regulation of
interleukin-18 production" evidence=IEA;ISO] [GO:0032703 "negative
regulation of interleukin-2 production" evidence=IEA;ISO]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA;ISO] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=ISO] [GO:0032733 "positive
regulation of interleukin-10 production" evidence=ISO] [GO:0032735
"positive regulation of interleukin-12 production"
evidence=IEA;ISO] [GO:0032740 "positive regulation of
interleukin-17 production" evidence=IEA;ISO] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA;ISO]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA;ISO] [GO:0032874 "positive regulation of
stress-activated MAPK cascade" evidence=ISO] [GO:0034136 "negative
regulation of toll-like receptor 2 signaling pathway"
evidence=IEA;ISO] [GO:0035419 "activation of MAPK activity involved
in innate immune response" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISO] [GO:0042742 "defense response to
bacterium" evidence=ISO;IDA] [GO:0042834 "peptidoglycan binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043330 "response
to exogenous dsRNA" evidence=IEA;ISO] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISO] [GO:0043552 "positive
regulation of phosphatidylinositol 3-kinase activity" evidence=ISO]
[GO:0044130 "negative regulation of growth of symbiont in host"
evidence=IEA;ISO] [GO:0045089 "positive regulation of innate immune
response" evidence=ISO] [GO:0045747 "positive regulation of Notch
signaling pathway" evidence=ISO] [GO:0046330 "positive regulation
of JNK cascade" evidence=IEA;ISO] [GO:0050679 "positive regulation
of epithelial cell proliferation" evidence=ISO] [GO:0050700 "CARD
domain binding" evidence=IEA;ISO] [GO:0050718 "positive regulation
of interleukin-1 beta secretion" evidence=IEA;ISO] [GO:0050731
"positive regulation of peptidyl-tyrosine phosphorylation"
evidence=IEA;ISO] [GO:0050766 "positive regulation of phagocytosis"
evidence=IEA;ISO] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IEA;ISO] [GO:0050871 "positive regulation of B
cell activation" evidence=IEA;ISO] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA;ISO]
[GO:0051353 "positive regulation of oxidoreductase activity"
evidence=ISO] [GO:0051770 "positive regulation of nitric-oxide
synthase biosynthetic process" evidence=ISO] [GO:0052033
"pathogen-associated molecular pattern dependent induction by
symbiont of host innate immune response" evidence=IDA] [GO:0060585
"positive regulation of prostaglandin-endoperoxide synthase
activity" evidence=ISO] [GO:0070374 "positive regulation of ERK1
and ERK2 cascade" evidence=IEA;ISO] [GO:0070431 "nucleotide-binding
oligomerization domain containing 2 signaling pathway"
evidence=IEA;ISO] [GO:0071224 "cellular response to peptidoglycan"
evidence=IEA;ISO] [GO:0071608 "macrophage inflammatory protein-1
alpha production" evidence=IEA;ISO] [GO:0090022 "regulation of
neutrophil chemotaxis" evidence=IEA;ISO] [GO:2000110 "negative
regulation of macrophage apoptotic process" evidence=ISO]
[GO:2000363 "positive regulation of prostaglandin-E synthase
activity" evidence=ISO] InterPro:IPR001315 Pfam:PF00619
PROSITE:PS50209 RGD:1306368 GO:GO:0005737 GO:GO:0042981
GO:GO:0008284 GO:GO:0042742 GO:GO:0007584 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0052033 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0032495 GO:GO:0002282 GO:GO:0032500
IPI:IPI00359351 ProteinModelPortal:F1LZ02
Ensembl:ENSRNOT00000018996 GO:GO:0002732 Uniprot:F1LZ02
Length = 1019
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/134 (26%), Positives = 67/134 (50%)
Query: 215 SQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLK 274
+ L++L N++G+KG +A ++ L+ L L+ + I A A+ ++ + L+
Sbjct: 878 TSLQFLGFWGNSVGDKGSQALAEVVADHQRLKWLSLVGNNIGSVGAHALALMLEKNKSLE 937
Query: 275 VLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDL 334
L N DEG +++E +K + L+ + S+ I G AL +AL + + + ++ L
Sbjct: 938 ELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALNRNSTVLEVWL 997
Query: 335 RDNMFGVEAGVALS 348
R N F E LS
Sbjct: 998 RGNTFSPEEAQTLS 1011
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 60/243 (24%), Positives = 97/243 (39%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
L L HN++G+ GV LL L+L ++ IS+ A+ ++E E+L+ L
Sbjct: 774 LQLDHNSVGDVGVEQ---LLPCLGVCTALYLRDNNISDRGARTLVECALRCEQLQKLALF 830
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
NN D A ++++++ H R + I A G LA+ L T L+ L N
Sbjct: 831 NNKLTDGCASSVAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLQFLGFWGNSV 890
Query: 340 GVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXX 399
G + AL+EV+ L + L SLE L L N I
Sbjct: 891 GDKGSQALAEVVADHQRLKWLSL-VGNNIGSVGAHALALMLEKNKSLEELCLEENHICDE 949
Query: 400 XXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGAR 459
L L L+ N + GA + ++L + ++E+ L N+ A+
Sbjct: 950 GVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALNR-NSTVLEVWLRGNTFSPEEAQ 1008
Query: 460 LLA 462
L+
Sbjct: 1009 TLS 1011
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 42/141 (29%), Positives = 68/141 (48%)
Query: 211 ALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPST 270
AL QL+ L L +N L + + LL + N L + N+ I+ A+ + + + S
Sbjct: 818 ALRCEQLQKLALFNNKLTDGCASSVAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSN 877
Query: 271 EKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLK 330
L+ L F N GD+G+ A++E+V L+ IG+ G ALA L + L+
Sbjct: 878 TSLQFLGFWGNSVGDKGSQALAEVVADHQRLKWLSLVGNNIGSVGAHALALMLEKNKSLE 937
Query: 331 KLDLRDNMFGVEAGVALSEVL 351
+L L +N E +L+E L
Sbjct: 938 ELCLEENHICDEGVYSLAEGL 958
>UNIPROTKB|O75864 [details] [associations]
symbol:PPP1R37 "Protein phosphatase 1 regulatory subunit
37" species:9606 "Homo sapiens" [GO:0004864 "protein phosphatase
inhibitor activity" evidence=IEA] [GO:0019902 "phosphatase binding"
evidence=IDA] [GO:0010923 "negative regulation of phosphatase
activity" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0004864 GO:GO:0010923 GO:GO:0019902 EMBL:AC011489
EMBL:AC005757 CTD:284352 eggNOG:NOG259751 HOGENOM:HOG000074153
HOVERGEN:HBG108102 OMA:GMTLPHT OrthoDB:EOG4SJ5DQ EMBL:AB075866
EMBL:BC035704 EMBL:BQ638089 IPI:IPI00290511 IPI:IPI00885097
RefSeq:NP_061994.1 UniGene:Hs.285363 ProteinModelPortal:O75864
SMR:O75864 IntAct:O75864 MINT:MINT-1193517 PhosphoSite:O75864
PRIDE:O75864 Ensembl:ENST00000221462 GeneID:284352 KEGG:hsa:284352
UCSC:uc002pat.3 GeneCards:GC19P045597 H-InvDB:HIX0015224
HGNC:HGNC:27607 HPA:HPA041500 neXtProt:NX_O75864 GenomeRNAi:284352
NextBio:94764 ArrayExpress:O75864 Bgee:O75864 CleanEx:HS_LRRC68
Genevestigator:O75864 Uniprot:O75864
Length = 691
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 65/296 (21%), Positives = 119/296 (40%)
Query: 183 QLTEVDLSDFIAGRPEEEAL-EVINMFSSALEGSQLRYLNLSHNA-LGEKGVRAFGALLK 240
Q VDL AL ++I + SA +LN+S N +G +G +A +++
Sbjct: 135 QFKVVDLEQTNLDEDGASALFDMIEYYESAT------HLNISFNKHIGTRGWQAAAHMMR 188
Query: 241 SQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA 300
+ L+ L N + + +A + + L VLH N + ++ +K +
Sbjct: 189 KTSCLQYLDARNTPLLDHSAPFVARALRIRSSLAVLHLENASLSGRPLMLLATALKMNMN 248
Query: 301 LEDFRCSSTRI-GAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVA-LSEVLPAFPDLT 358
L + + ++ G + L L L+ LDLR+N +++G+A + E L
Sbjct: 249 LRELYLADNKLNGLQDSAQLGNLLKFNCSLQILDLRNNHV-LDSGLAYICEGLKEQRKGL 307
Query: 359 EVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLN 418
+ + SLE L+L N I + + +L
Sbjct: 308 VTLVLWNNQLTHTGMAFLGMTLPHTQSLETLNLGHNPIGNEGVRHLKNGLISNRSVLRLG 367
Query: 419 LAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLA-QVAVNKPGLKM 473
LA +L EGA+ + + + E +L+ +DL N +K G L+ + VN L++
Sbjct: 368 LASTKLTCEGAVAVAEFIAESP-RLLRLDLRENEIKTGGLMALSLALKVNHSLLRL 422
>UNIPROTKB|A7Z026 [details] [associations]
symbol:PPP1R37 "Protein phosphatase 1 regulatory subunit
37" species:9913 "Bos taurus" [GO:0019902 "phosphatase binding"
evidence=ISS] [GO:0010923 "negative regulation of phosphatase
activity" evidence=ISS] [GO:0004864 "protein phosphatase inhibitor
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0004864 GO:GO:0010923 GO:GO:0019902
GeneTree:ENSGT00640000091171 EMBL:BC153224 IPI:IPI00690419
RefSeq:NP_001098849.1 UniGene:Bt.62290 ProteinModelPortal:A7Z026
Ensembl:ENSBTAT00000025071 GeneID:516932 KEGG:bta:516932 CTD:284352
eggNOG:NOG259751 HOGENOM:HOG000074153 HOVERGEN:HBG108102
InParanoid:A7Z026 OMA:GMTLPHT OrthoDB:EOG4SJ5DQ NextBio:20872337
Uniprot:A7Z026
Length = 699
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 64/296 (21%), Positives = 120/296 (40%)
Query: 183 QLTEVDLSDFIAGRPEEEAL-EVINMFSSALEGSQLRYLNLSHNA-LGEKGVRAFGALLK 240
Q VDL AL ++I + SA +LN+S N +G +G +A +++
Sbjct: 135 QFKVVDLEQTNLDEDGASALFDMIEYYESAT------HLNISFNKHIGTRGWQAAAHMMR 188
Query: 241 SQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA 300
+ L+ L N + + +A + + L VLH ++ + ++ +K +
Sbjct: 189 KTSCLQYLDARNTPLLDHSAPFVARALRIRSSLAVLHLESSSLSGRPLMLLATALKMNMT 248
Query: 301 LEDFRCSSTRI-GAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVA-LSEVLPAFPDLT 358
L + + ++ G + L L L+ LDLR+N +++G+A + E L
Sbjct: 249 LRELYLADNKLNGLQDSAQLGNLLKFNCSLQILDLRNNHV-LDSGLAYICEGLKEQRKGL 307
Query: 359 EVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLN 418
+ + SLE L+L N I + + +L
Sbjct: 308 ATLVLWNNQLTHTGMAFLGMTLPHTHSLETLNLGHNPIGNEGVRNLKNGLISNRSVLRLG 367
Query: 419 LAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLA-QVAVNKPGLKM 473
LA +L EGA+ + + + E +L+ +DL N +K G L+ + VN L++
Sbjct: 368 LASTKLTCEGAVAVAEFIAESP-RLLRLDLRENEIKTGGLMALSLALKVNHSLLRL 422
>UNIPROTKB|E2RI72 [details] [associations]
symbol:PPP1R37 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0019902 "phosphatase binding"
evidence=IEA] [GO:0010923 "negative regulation of phosphatase
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0010923 GeneTree:ENSGT00640000091171 CTD:284352 OMA:GMTLPHT
EMBL:AAEX03000889 EMBL:AAEX03000888 RefSeq:XP_541567.3
Ensembl:ENSCAFT00000007363 GeneID:484452 KEGG:cfa:484452
NextBio:20858590 Uniprot:E2RI72
Length = 700
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 47/186 (25%), Positives = 86/186 (46%)
Query: 169 ASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALE-GSQLRYLNLSHNAL 227
AS P++ L V+L + + L+ + L+ S L+ L+L +N +
Sbjct: 229 ASLSGRPLMLLATALKMNVNLRELYLADNKLNGLQDSAQLGNLLKFNSSLQILDLRNNHV 288
Query: 228 GEKGVRAFGALLKSQNN-LEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDE 286
+ G+ LK Q LE L L N+ ++ + +P T+ L+ L+ +N G+E
Sbjct: 289 LDSGLAYICEGLKEQKKGLETLVLWNNQLTHTGMAFLGMTLPHTQSLETLNLGHNPIGNE 348
Query: 287 GAVAISE-IVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGV 345
G + ++ + L +ST++ EG +A+A+ + + L +LDLR+N +
Sbjct: 349 GVRNLKNGLISNRSVLR-LGLTSTKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLM 407
Query: 346 ALSEVL 351
ALS L
Sbjct: 408 ALSLAL 413
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/286 (22%), Positives = 105/286 (36%)
Query: 216 QLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHL-MNDGISEEAAQAILELIPSTEKLK 274
Q R ++L L E G A +++ + L++ N I QA ++ T L+
Sbjct: 135 QFRVVDLEQTNLDEDGASALFDMIEYYESATHLNISFNKHIGTRGWQAAAHMMRKTSCLQ 194
Query: 275 VLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDL 334
L N D A ++ ++ +L + + + LA AL +L++L L
Sbjct: 195 YLDARNTPLLDHSAPFVARALRIRSSLAVLHLENASLSGRPLMLLATALKMNVNLRELYL 254
Query: 335 RDNMF-GVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAG 393
DN G++ L +L L + L LE L L
Sbjct: 255 ADNKLNGLQDSAQLGNLLKFNSSLQILDLRNNHVLDSGLAYICEGLKEQKKGLETLVLWN 314
Query: 394 NDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSM 453
N +T Q L LNL N + +EG + L ++ + L++ +
Sbjct: 315 NQLTHTGMAFLGMTLPHTQSLETLNLGHNPIGNEGVRNLKNGLISNRS-VLRLGLTSTKL 373
Query: 454 KRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILK--HSL 497
GA +A+ P L L++ N I G+ + LK HSL
Sbjct: 374 TCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSLALKVNHSL 419
>MGI|MGI:2687042 [details] [associations]
symbol:Ppp1r37 "protein phosphatase 1, regulatory subunit
37" species:10090 "Mus musculus" [GO:0004864 "protein phosphatase
inhibitor activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0010923 "negative regulation of phosphatase
activity" evidence=ISO] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0043086 "negative regulation of catalytic
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2687042 GO:GO:0004864 GO:GO:0010923 GO:GO:0019902
GeneTree:ENSGT00640000091171 CTD:284352 eggNOG:NOG259751
HOGENOM:HOG000074153 HOVERGEN:HBG108102 OMA:GMTLPHT
OrthoDB:EOG4SJ5DQ EMBL:AK050946 EMBL:BC070402 IPI:IPI00279642
RefSeq:NP_954600.1 UniGene:Mm.219662 ProteinModelPortal:Q8BKR5
SMR:Q8BKR5 PhosphoSite:Q8BKR5 PaxDb:Q8BKR5 PRIDE:Q8BKR5
Ensembl:ENSMUST00000058444 GeneID:232947 KEGG:mmu:232947
UCSC:uc009fmh.1 InParanoid:Q8BKR5 NextBio:381365 Bgee:Q8BKR5
Genevestigator:Q8BKR5 Uniprot:Q8BKR5
Length = 712
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 65/296 (21%), Positives = 119/296 (40%)
Query: 183 QLTEVDLSDFIAGRPEEEAL-EVINMFSSALEGSQLRYLNLSHNA-LGEKGVRAFGALLK 240
Q VDL AL ++I + SA +LN+S N +G +G +A +++
Sbjct: 141 QFKVVDLEQTNLDEDGASALFDMIEYYESAT------HLNISFNKHIGTRGWQAAAHMMR 194
Query: 241 SQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA 300
+ L+ L N + + +A + + L VLH N + ++ +K +
Sbjct: 195 KTSCLQYLDARNTPLLDHSAPFVARALRIRSSLAVLHLENASLSGRPLMLLATALKMNMN 254
Query: 301 LEDFRCSSTRI-GAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVA-LSEVLPAFPDLT 358
L + + ++ G + L L L+ LDLR+N +++G+A + E L
Sbjct: 255 LRELYLADNKLNGLQDSAQLGNLLKFNCSLQILDLRNNHV-LDSGLAYICEGLKEQRKGL 313
Query: 359 EVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLN 418
+ + SLE L+L N I + + +L
Sbjct: 314 VTLVLWNNQLTHTGMAFLGMALPHTQSLETLNLGHNPIGNEGVRNLKNGLISNRSVLRLG 373
Query: 419 LAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLA-QVAVNKPGLKM 473
LA +L EGA+ + + + E +L+ +DL N +K G L+ + VN L++
Sbjct: 374 LASTKLTCEGAVAVAEFIAESP-RLLRLDLRENEIKTGGLMALSLALKVNHSLLRL 428
>UNIPROTKB|F1PS92 [details] [associations]
symbol:NLRP9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104141
InterPro:IPR003590 SMART:SM00368 EMBL:AAEX03000721
Ensembl:ENSCAFT00000003954 Uniprot:F1PS92
Length = 995
Score = 123 (48.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 67/245 (27%), Positives = 104/245 (42%)
Query: 160 FSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRY 219
FS S + +A P+ +L K SDF P AL + L L++
Sbjct: 645 FSEASLAILCKALAQPVCKLQKFVYNFA--SDF-GSSP---ALH-----KAILHNPHLKH 693
Query: 220 LNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILELIPSTEKLKVLHF 278
LNL ++L VR +LK ++EEL L I+ EA + I ++ +KLK+L
Sbjct: 694 LNLHGSSLSHVDVRQLCEMLKHPTCSIEELMLGMCDITAEACEEIASVLVCNKKLKLLSL 753
Query: 279 HNNMTGDEGAVAISEIVKHSPA-LEDFR---CSSTRIGAEGGIALAKALGQCTHLKKLDL 334
N +EG + + + +KH LE C T + + +++AL L LDL
Sbjct: 754 AENPLRNEGMLMLCDALKHPDCVLETLLLMCCCLTSVACD---YISQALLCNKSLSFLDL 810
Query: 335 RDNMFGVEAGVA-LSEVLPAFPD--LTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDL 391
N F + GVA L E L P+ + +++L+ C L++L L
Sbjct: 811 ESN-FLKDDGVASLCEALK-HPNCHIEQLWLA-DCSLTSLCCKNLSDVLVCNEKLKILKL 867
Query: 392 AGNDI 396
NDI
Sbjct: 868 GSNDI 872
Score = 122 (48.0 bits), Expect = 0.00068, P = 0.00068
Identities = 39/137 (28%), Positives = 63/137 (45%)
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILELIPSTEKLKV 275
L +L+L N L + GV + LK N ++E+L L + ++ + + +++ EKLK+
Sbjct: 805 LSFLDLESNFLKDDGVASLCEALKHPNCHIEQLWLADCSLTSLCCKNLSDVLVCNEKLKI 864
Query: 276 LHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDL 334
L +N D G + E +KH +E ++ ALA AL C LK L+L
Sbjct: 865 LKLGSNDIQDAGVKQLCEALKHPDCKVEHLGLDMCQLTTACCEALASALTVCKSLKSLNL 924
Query: 335 RDNMFGVEAGVALSEVL 351
+ V L E L
Sbjct: 925 HWISLDRDGAVVLCEAL 941
Score = 61 (26.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 417 LNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNI 476
L L N++QD G + ++L+ ++ + L + A LA LK LN+
Sbjct: 865 LKLGSNDIQDAGVKQLCEALKHPDCKVEHLGLDMCQLTTACCEALASALTVCKSLKSLNL 924
Query: 477 NGNFIPDEGIDEVKEILKH---SLDVLGPLDEN 506
+ + +G + E L H +L LG LD++
Sbjct: 925 HWISLDRDGAVVLCEALNHLDCALQQLG-LDKS 956
>ZFIN|ZDB-GENE-080206-3 [details] [associations]
symbol:zgc:174178 "zgc:174178" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003877 Pfam:PF00622
ZFIN:ZDB-GENE-080206-3 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR007111
PROSITE:PS50837 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG257844 HOVERGEN:HBG092009
EMBL:BC155123 IPI:IPI00884767 RefSeq:NP_001107787.1
UniGene:Dr.72752 Ensembl:ENSDART00000113571 GeneID:797610
KEGG:dre:797610 GeneTree:ENSGT00690000101971 HOGENOM:HOG000251591
NextBio:20933082 Uniprot:A9JSX9
Length = 965
Score = 136 (52.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 51/150 (34%), Positives = 78/150 (52%)
Query: 209 SSALEGSQ--LRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILE 265
SSAL+ S LR L+LS+N L + GV+ LKSQ+ L+ L L ++ + +++
Sbjct: 616 SSALQSSNCVLRELDLSNNDLQDSGVKKLSDGLKSQHCKLDTLRLQFCNLTVQCCESLSS 675
Query: 266 LIPSTE-KLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKAL 323
+ S+ L+ L NN D G +S+ +K L+ R S + EG L+ AL
Sbjct: 676 ALQSSNCVLRELDLSNNDLQDSGVKLLSDGLKSQHCKLDTLRLSGCMVTEEGCGFLSSAL 735
Query: 324 -GQCTHLKKLDLRDNMFGVEAGVAL-SEVL 351
+HL++LDL N G ++GV L SE L
Sbjct: 736 TSNPSHLRELDLSYNHPG-DSGVKLLSEQL 764
>UNIPROTKB|F1PK29 [details] [associations]
symbol:RNH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045765 "regulation of angiogenesis"
evidence=IEA] [GO:0032311 "angiogenin-PRI complex" evidence=IEA]
[GO:0008428 "ribonuclease inhibitor activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005737 GO:GO:0045765
GO:GO:0008428 GO:GO:0032311 InterPro:IPR003590 SMART:SM00368
OMA:MEDRLQA GeneTree:ENSGT00670000097902 EMBL:AAEX03011320
EMBL:AAEX03011321 EMBL:AAEX03011322 EMBL:AAEX03011323
Ensembl:ENSCAFT00000038320 Uniprot:F1PK29
Length = 456
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 63/281 (22%), Positives = 106/281 (37%)
Query: 216 QLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPS-TEKLK 274
Q + L L E + + L++ +L EL L + + + +L+ + S T K++
Sbjct: 24 QYEVVRLDDCGLTEVRCKDISSALQANPSLTELSLCTNELGDAGVHLVLQGLQSPTCKIQ 83
Query: 275 VLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKAL--GQCTHLKKL 332
L N G + +++ P L + S + G L + L QC HL+KL
Sbjct: 84 KLSLQNCCLTKTGCGVLPAVLRSMPTLRELHLSDNPLEDAGLQLLCEGLLDPQC-HLEKL 142
Query: 333 DLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLA 392
L + +L+ L E+ +S A LE L L
Sbjct: 143 QLEYCNLTAASCESLASALRNKQHFKELAVSNNEIGEAGVRVLCQGLVESACQLETLKLE 202
Query: 393 GNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNS 452
+T L +L+L +N+L D+G ++ SL Q+ + L
Sbjct: 203 NCGLTPASCEDLRAVVASKTSLRELDLGDNKLGDQGIAVLCPSLLHPSCQIRVLWLWECD 262
Query: 453 MKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEIL 493
+ G R L V K L+ L++ N + DEG + E L
Sbjct: 263 VTATGCRDLCHVVSTKESLEELSLACNALGDEGAQLLCESL 303
Score = 118 (46.6 bits), Expect = 0.00066, P = 0.00066
Identities = 52/233 (22%), Positives = 94/233 (40%)
Query: 265 ELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALG 324
EL+P ++ +V+ + + IS ++ +P+L + + +G G + + L
Sbjct: 17 ELLPLIQQYEVVRLDDCGLTEVRCKDISSALQANPSLTELSLCTNELGDAGVHLVLQGLQ 76
Query: 325 QCT-HLKKLDLRDNMFGVEAGVA-LSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXC 382
T ++KL L+ N + G L VL + P L E++LS
Sbjct: 77 SPTCKIQKLSLQ-NCCLTKTGCGVLPAVLRSMPTLRELHLSDNPLEDAGLQLLCEGLLDP 135
Query: 383 APSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQ 442
LE L L ++T Q +L ++ NE+ + G ++ + L E Q
Sbjct: 136 QCHLEKLQLEYCNLTAASCESLASALRNKQHFKELAVSNNEIGEAGVRVLCQGLVESACQ 195
Query: 443 LIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKH 495
L + L + A L V +K L+ L++ N + D+GI + L H
Sbjct: 196 LETLKLENCGLTPASCEDLRAVVASKTSLRELDLGDNKLGDQGIAVLCPSLLH 248
>UNIPROTKB|E9PIM9 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] EMBL:AC137894
IPI:IPI00979739 ProteinModelPortal:E9PIM9 SMR:E9PIM9 PRIDE:E9PIM9
Ensembl:ENST00000527485 HGNC:HGNC:10074 ChiTaRS:RNH1
ArrayExpress:E9PIM9 Bgee:E9PIM9 GO:GO:0005737 Uniprot:E9PIM9
Length = 199
Score = 87 (35.7 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
L +L+L++N L D G L+ + L + +L ++ L S+ A LA V KP K
Sbjct: 115 LQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKE 174
Query: 474 LNINGNFIPDEGIDEVKEILKHS 496
L ++ N I + G+ + + LK S
Sbjct: 175 LTVSNNDINEAGVRVLCQGLKDS 197
Score = 77 (32.2 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 257 EEAAQAI-LELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEG 315
EE + A EL+P ++ +V+ + + IS ++ +PAL + S +G G
Sbjct: 13 EELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVG 72
Query: 316 GIALAKALG--QCTHLKKLDLRDN-MFGVEAGVALSEVLPAFPDLTEVYLS 363
+ + L C ++KL L++ + G GV LS L P L E++LS
Sbjct: 73 VHCVLQGLQTPSCK-IQKLSLQNCCLTGAGCGV-LSSTLRTLPTLQELHLS 121
>UNIPROTKB|Q6E804 [details] [associations]
symbol:NOD2 "Nucleotide-binding oligomerization
domain-containing protein 2" species:9913 "Bos taurus" [GO:0002830
"positive regulation of type 2 immune response" evidence=ISS]
[GO:0032495 "response to muramyl dipeptide" evidence=IDA]
[GO:0046645 "positive regulation of gamma-delta T cell activation"
evidence=IMP] [GO:0090022 "regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071608 "macrophage inflammatory protein-1 alpha
production" evidence=IEA] [GO:0071224 "cellular response to
peptidoglycan" evidence=IEA] [GO:0070431 "nucleotide-binding
oligomerization domain containing 2 signaling pathway"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0050871
"positive regulation of B cell activation" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0050766 "positive regulation of phagocytosis"
evidence=IEA] [GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0050718 "positive regulation of
interleukin-1 beta secretion" evidence=IEA] [GO:0050700 "CARD
domain binding" evidence=IEA] [GO:0046330 "positive regulation of
JNK cascade" evidence=IEA] [GO:0044130 "negative regulation of
growth of symbiont in host" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042834
"peptidoglycan binding" evidence=IEA] [GO:0034136 "negative
regulation of toll-like receptor 2 signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032740 "positive
regulation of interleukin-17 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=IEA] [GO:0032701 "negative
regulation of interleukin-18 production" evidence=IEA] [GO:0032695
"negative regulation of interleukin-12 production" evidence=IEA]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IEA] [GO:0032500 "muramyl dipeptide binding" evidence=IEA]
[GO:0032498 "detection of muramyl dipeptide" evidence=IEA]
[GO:0032496 "response to lipopolysaccharide" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0031982 "vesicle" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016045
"detection of bacterium" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0006965
"positive regulation of biosynthetic process of antibacterial
peptides active against Gram-positive bacteria" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0002925 "positive regulation of humoral immune
response mediated by circulating immunoglobulin" evidence=IEA]
[GO:0002862 "negative regulation of inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0002710 "negative regulation
of T cell mediated immunity" evidence=IEA] [GO:0002381
"immunoglobulin production involved in immunoglobulin mediated
immune response" evidence=IEA] [GO:0002367 "cytokine production
involved in immune response" evidence=IEA] [GO:0002227 "innate
immune response in mucosa" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] InterPro:IPR001611 InterPro:IPR001315 Pfam:PF00619
PROSITE:PS50209 PROSITE:PS51450 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 GO:GO:0016045 GO:GO:0002381
GO:GO:0032689 GO:GO:0002862 GO:GO:0050830 GO:GO:0032496
GO:GO:0070374 GO:GO:0032755 GO:GO:0045747 GO:GO:0050731
GO:GO:0050766 GO:GO:0032720 GO:GO:0044130 GO:GO:0035419
GO:GO:0031398 GO:GO:0032088 GO:GO:0050718 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0031982 GO:GO:0008180
GO:GO:0006965 GO:GO:0002227 GO:GO:0042834 GO:GO:0032695
GO:GO:0032760 GO:GO:0050679 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0043330 GO:GO:0032495 GO:GO:0002606 GO:GO:0032735
GO:GO:0043552 GO:GO:0051770 GO:GO:2000110 GO:GO:0032733
GO:GO:0002830 GO:GO:0032703 GO:GO:0032874 GO:GO:0060585
GO:GO:0090022 GO:GO:0002925 GO:GO:0070431 GO:GO:0032740
GO:GO:0050871 GO:GO:0034136 GeneTree:ENSGT00660000095240
EMBL:AY518737 EMBL:AY518748 EMBL:AY518739 EMBL:AY518740
EMBL:AY518741 EMBL:AY518742 EMBL:AY518743 EMBL:AY518744
EMBL:AY518745 EMBL:AY518746 EMBL:AY518747 IPI:IPI00717866
RefSeq:NP_001002889.1 UniGene:Bt.30778 ProteinModelPortal:Q6E804
STRING:Q6E804 Ensembl:ENSBTAT00000027887 GeneID:444867
KEGG:bta:444867 CTD:64127 eggNOG:NOG248107 HOGENOM:HOG000113814
InParanoid:Q6E804 KO:K10165 OMA:WASGRAF OrthoDB:EOG4WM4T6
NextBio:20831757 GO:GO:0032500 GO:GO:0071224 GO:GO:0002367
GO:GO:0032498 GO:GO:0071608 GO:GO:0032701 GO:GO:0002710
GO:GO:0046645 GO:GO:2000363 Uniprot:Q6E804
Length = 1013
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 39/143 (27%), Positives = 65/143 (45%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
L L +N + G L++ N+L+ L + + +E AQA+ + + L+ L
Sbjct: 849 LRLGNNHITAAGAEVLAQGLRTNNSLQFLGFWGNQVGDEGAQALAAALGDHQSLRWLSLV 908
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
N G GA A++ +++ + ALE+ + EG LAK L + + LK L L +N
Sbjct: 909 GNNIGSVGAQALALMLEKNMALEELCLEENHVQDEGVCFLAKGLARNSSLKVLKLSNNHI 968
Query: 340 GVEAGVALSEVLPAFPDLTEVYL 362
AL L + EV+L
Sbjct: 969 SSLGAEALLRALEKNDTILEVWL 991
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 38/134 (28%), Positives = 62/134 (46%)
Query: 204 VINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAI 263
+ + AL QL+ L L +N L + + LL + N L L N+ I+ A+ +
Sbjct: 805 ICKLVEHALRCEQLQKLALFNNKLTDGCAHSMARLLACKQNFLALRLGNNHITAAGAEVL 864
Query: 264 LELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKAL 323
+ + + L+ L F N GDEGA A++ + +L IG+ G ALA L
Sbjct: 865 AQGLRTNNSLQFLGFWGNQVGDEGAQALAAALGDHQSLRWLSLVGNNIGSVGAQALALML 924
Query: 324 GQCTHLKKLDLRDN 337
+ L++L L +N
Sbjct: 925 EKNMALEELCLEEN 938
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 34/128 (26%), Positives = 63/128 (49%)
Query: 215 SQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLK 274
+ L++L N +G++G +A A L +L L L+ + I AQA+ ++ L+
Sbjct: 872 NSLQFLGFWGNQVGDEGAQALAAALGDHQSLRWLSLVGNNIGSVGAQALALMLEKNMALE 931
Query: 275 VLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDL 334
L N DEG +++ + + +L+ + S+ I + G AL +AL + + ++ L
Sbjct: 932 ELCLEENHVQDEGVCFLAKGLARNSSLKVLKLSNNHISSLGAEALLRALEKNDTILEVWL 991
Query: 335 RDNMFGVE 342
R N F E
Sbjct: 992 RGNTFSPE 999
>UNIPROTKB|D4A5W3 [details] [associations]
symbol:Nod2 "Caspase recruitment domain family, member 15
(Predicted)" species:10116 "Rattus norvegicus" [GO:0002227 "innate
immune response in mucosa" evidence=IEA] [GO:0002367 "cytokine
production involved in immune response" evidence=IEA] [GO:0002381
"immunoglobulin production involved in immunoglobulin mediated
immune response" evidence=IEA] [GO:0002710 "negative regulation of
T cell mediated immunity" evidence=IEA] [GO:0002830 "positive
regulation of type 2 immune response" evidence=IEA] [GO:0002862
"negative regulation of inflammatory response to antigenic
stimulus" evidence=IEA] [GO:0002925 "positive regulation of humoral
immune response mediated by circulating immunoglobulin"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006965 "positive regulation of
biosynthetic process of antibacterial peptides active against
Gram-positive bacteria" evidence=IEA] [GO:0008180 "signalosome"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0016045
"detection of bacterium" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0031982 "vesicle" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0032496 "response to
lipopolysaccharide" evidence=IEA] [GO:0032498 "detection of muramyl
dipeptide" evidence=IEA] [GO:0032500 "muramyl dipeptide binding"
evidence=IEA] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IEA] [GO:0032695 "negative regulation of
interleukin-12 production" evidence=IEA] [GO:0032701 "negative
regulation of interleukin-18 production" evidence=IEA] [GO:0032703
"negative regulation of interleukin-2 production" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032740 "positive
regulation of interleukin-17 production" evidence=IEA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0034136 "negative regulation of
toll-like receptor 2 signaling pathway" evidence=IEA] [GO:0042834
"peptidoglycan binding" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043123 "positive regulation
of I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IEA] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IEA] [GO:0046330
"positive regulation of JNK cascade" evidence=IEA] [GO:0050700
"CARD domain binding" evidence=IEA] [GO:0050718 "positive
regulation of interleukin-1 beta secretion" evidence=IEA]
[GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0050766 "positive regulation of
phagocytosis" evidence=IEA] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=IEA] [GO:0050871 "positive
regulation of B cell activation" evidence=IEA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0070431 "nucleotide-binding
oligomerization domain containing 2 signaling pathway"
evidence=IEA] [GO:0071224 "cellular response to peptidoglycan"
evidence=IEA] [GO:0071608 "macrophage inflammatory protein-1 alpha
production" evidence=IEA] [GO:0090022 "regulation of neutrophil
chemotaxis" evidence=IEA] InterPro:IPR001315 Pfam:PF00619
PROSITE:PS50209 RGD:1306368 GO:GO:0042981 GO:GO:0005622
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00660000095240
CTD:64127 KO:K10165 OrthoDB:EOG4WM4T6 EMBL:CH474037 IPI:IPI00948526
RefSeq:NP_001099642.1 UniGene:Rn.218600 Ensembl:ENSRNOT00000065103
GeneID:291912 KEGG:rno:291912 NextBio:633360 Uniprot:D4A5W3
Length = 932
Score = 133 (51.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 39/132 (29%), Positives = 63/132 (47%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
L L HN++G+ GV LL L+L ++ IS+ A+ ++E E+L+ L
Sbjct: 767 LQLDHNSVGDVGVEQ---LLPCLGVCTALYLRDNNISDRGARTLVECALRCEQLQKLALF 823
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
NN D A ++++++ H R + I A G LA+ L T L+ L N
Sbjct: 824 NNKLTDGCASSVAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLQFLGFWGNSV 883
Query: 340 GVEAGVALSEVL 351
G + AL+EV+
Sbjct: 884 GDKGSQALAEVV 895
Score = 122 (48.0 bits), Expect = 0.00063, P = 0.00063
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 211 ALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPST 270
AL QL+ L L +N L + + LL + N L + N+ I+ A+ + + + S
Sbjct: 811 ALRCEQLQKLALFNNKLTDGCASSVAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSN 870
Query: 271 EKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLK 330
L+ L F N GD+G+ A++E+V L+ IG+ G ALA L + L+
Sbjct: 871 TSLQFLGFWGNSVGDKGSQALAEVVADHQRLKWLSLVGNNIGSVGAHALALMLEKNKSLE 930
Query: 331 KL 332
+L
Sbjct: 931 EL 932
>UNIPROTKB|Q7RTR0 [details] [associations]
symbol:NLRP9 "NACHT, LRR and PYD domains-containing protein
9" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005524
GO:GO:0005737 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
EMBL:CH471135 InterPro:IPR007111 PROSITE:PS50837
HOGENOM:HOG000294064 HOVERGEN:HBG063656 HSSP:P10775
OrthoDB:EOG4N04DB eggNOG:NOG148799 OMA:FGHDSEL CTD:338321
EMBL:AY154464 EMBL:BC136583 EMBL:BK001114 IPI:IPI00328972
IPI:IPI00337644 RefSeq:NP_789790.2 UniGene:Hs.661568
ProteinModelPortal:Q7RTR0 SMR:Q7RTR0 STRING:Q7RTR0
PhosphoSite:Q7RTR0 DMDM:74762418 PaxDb:Q7RTR0 PRIDE:Q7RTR0
Ensembl:ENST00000332836 GeneID:338321 KEGG:hsa:338321
UCSC:uc002qly.3 GeneCards:GC19M056219 H-InvDB:HIX0040053
HGNC:HGNC:22941 HPA:HPA042623 MIM:609663 neXtProt:NX_Q7RTR0
PharmGKB:PA162398029 InParanoid:Q7RTR0 PhylomeDB:Q7RTR0
GenomeRNAi:338321 NextBio:96925 Bgee:Q7RTR0 CleanEx:HS_NLRP9
Genevestigator:Q7RTR0 Uniprot:Q7RTR0
Length = 991
Score = 111 (44.1 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 43/145 (29%), Positives = 63/145 (43%)
Query: 207 MFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILE 265
+F + L L+ L+L +L + +R LK +EEL L IS E + I
Sbjct: 677 LFKAVLHNPHLKLLSLYGTSLSQSDIRHLCETLKHPMCKIEELILGKCDISSEVCEDIAS 736
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSP-ALEDFR---CSSTRIGAEGGIALAK 321
++ KLK L N DEG + E +KHS ALE C T + + ++++
Sbjct: 737 VLACNSKLKHLSLVENPLRDEGMTLLCEALKHSHCALERLMLMYCCLTSVSCD---SISE 793
Query: 322 ALGQCTHLKKLDLRDNMFGVEAGVA 346
L L LDL N + GVA
Sbjct: 794 VLLCSKSLSLLDLGSNALE-DNGVA 817
Score = 69 (29.3 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 24/91 (26%), Positives = 42/91 (46%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
L+ L+L N L+D G + +L+ + E+ L + + +A V + LK
Sbjct: 801 LSLLDLGSNALEDNGVASLCAALKHPGCSIRELWLMGCFLTSDSCKDIAAVLICNGKLKT 860
Query: 474 LNINGNFIPDEGIDEVKEILKH---SLDVLG 501
L + N I D G+ ++ L+H L+ LG
Sbjct: 861 LKLGHNEIGDTGVRQLCAALQHPHCKLECLG 891
Score = 65 (27.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/91 (26%), Positives = 42/91 (46%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
L L L NE+ D G + +L+ H +L + L T + RA +A + L+
Sbjct: 858 LKTLKLGHNEIGDTGVRQLCAALQHPHCKLECLGLQTCPITRACCDDIAAALIACKTLRS 917
Query: 474 LNINGNFIPDEGIDEVKEILKH---SLDVLG 501
LN++ + + + + E L H +L +LG
Sbjct: 918 LNLDWIALDADAVVVLCEALSHPDCALQMLG 948
>UNIPROTKB|E9PMJ3 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005737
EMBL:AC137894 HGNC:HGNC:10074 ChiTaRS:RNH1 IPI:IPI00983412
ProteinModelPortal:E9PMJ3 SMR:E9PMJ3 PRIDE:E9PMJ3
Ensembl:ENST00000529306 ArrayExpress:E9PMJ3 Bgee:E9PMJ3
Uniprot:E9PMJ3
Length = 189
Score = 83 (34.3 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
L +L+L++N L D G L+ + L + +L ++ L S+ A LA V KP K
Sbjct: 115 LQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKE 174
Query: 474 LNINGNFIPDEGI 486
L ++ N I + G+
Sbjct: 175 LTVSNNDINEAGV 187
Score = 77 (32.2 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 257 EEAAQAI-LELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEG 315
EE + A EL+P ++ +V+ + + IS ++ +PAL + S +G G
Sbjct: 13 EELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVG 72
Query: 316 GIALAKALG--QCTHLKKLDLRDN-MFGVEAGVALSEVLPAFPDLTEVYLS 363
+ + L C ++KL L++ + G GV LS L P L E++LS
Sbjct: 73 VHCVLQGLQTPSCK-IQKLSLQNCCLTGAGCGV-LSSTLRTLPTLQELHLS 121
>UNIPROTKB|F1NAC7 [details] [associations]
symbol:F1NAC7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0034341 "response to interferon-gamma" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046677 "response to antibiotic" evidence=IEA]
InterPro:IPR001611 InterPro:IPR008095 PRINTS:PR01719
PROSITE:PS51450 GO:GO:0005524 GO:GO:0045944 GO:GO:0046677
GO:GO:0000122 GO:GO:0044212 InterPro:IPR025875 Pfam:PF12799
GO:GO:0034341 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0045345
GeneTree:ENSGT00660000095240 EMBL:AADN02023473 IPI:IPI00571200
Ensembl:ENSGALT00000011613 OMA:EQTKDYE Uniprot:F1NAC7
Length = 759
Score = 129 (50.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 29/111 (26%), Positives = 55/111 (49%)
Query: 222 LSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNN 281
LS N +G++G ++ + + +LE L+L + I++ A+ + +PS L L +NN
Sbjct: 625 LSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDVGAEKLATALPSLSSLTTLSLYNN 684
Query: 282 MTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
D GA +++++ +L +I G L +L +C H+K L
Sbjct: 685 SICDFGAENLAKVLPAMASLRVLDIQYNKITDVGAQQLTDSLRKCPHIKNL 735
>UNIPROTKB|E9PLZ3 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005737
EMBL:AC137894 HGNC:HGNC:10074 ChiTaRS:RNH1 IPI:IPI00975857
ProteinModelPortal:E9PLZ3 SMR:E9PLZ3 PRIDE:E9PLZ3
Ensembl:ENST00000529368 ArrayExpress:E9PLZ3 Bgee:E9PLZ3
Uniprot:E9PLZ3
Length = 194
Score = 83 (34.3 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
L +L+L++N L D G L+ + L + +L ++ L S+ A LA V KP K
Sbjct: 115 LQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKE 174
Query: 474 LNINGNFIPDEGI 486
L ++ N I + G+
Sbjct: 175 LTVSNNDINEAGV 187
Score = 77 (32.2 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 257 EEAAQAI-LELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEG 315
EE + A EL+P ++ +V+ + + IS ++ +PAL + S +G G
Sbjct: 13 EELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVG 72
Query: 316 GIALAKALG--QCTHLKKLDLRDN-MFGVEAGVALSEVLPAFPDLTEVYLS 363
+ + L C ++KL L++ + G GV LS L P L E++LS
Sbjct: 73 VHCVLQGLQTPSCK-IQKLSLQNCCLTGAGCGV-LSSTLRTLPTLQELHLS 121
>UNIPROTKB|E9PFE0 [details] [associations]
symbol:CIITA "MHC class II transactivator" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001611 InterPro:IPR008095 PRINTS:PR01719
PROSITE:PS51450 GO:GO:0005524 GO:GO:0006355 InterPro:IPR025875
Pfam:PF12799 EMBL:AC133065 HGNC:HGNC:7067 IPI:IPI00641977
ProteinModelPortal:E9PFE0 SMR:E9PFE0 Ensembl:ENST00000381835
UCSC:uc002dak.4 ArrayExpress:E9PFE0 Bgee:E9PFE0 Uniprot:E9PFE0
Length = 546
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 215 SQLRYLNL---SHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPS-T 270
S L++L+L S N +G++GV A +LE L+L + I++ A + E +PS
Sbjct: 400 SSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLAEALPSLA 459
Query: 271 EKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLK 330
L L +NN D GA +++ ++ +L + A G LA +L +C H++
Sbjct: 460 ASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLRRCPHVE 519
Query: 331 KL 332
L
Sbjct: 520 TL 521
>RGD|1309415 [details] [associations]
symbol:Nlrp12 "NLR family, pyrin domain containing 12"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0008588
"release of cytoplasmic sequestered NF-kappaB" evidence=ISO]
[GO:0009968 "negative regulation of signal transduction"
evidence=ISO] [GO:0031953 "negative regulation of protein
autophosphorylation" evidence=ISO] [GO:0032088 "negative regulation
of NF-kappaB transcription factor activity" evidence=ISO]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=ISO] [GO:0045409 "negative regulation of
interleukin-6 biosynthetic process" evidence=ISO] [GO:0045751
"negative regulation of Toll signaling pathway" evidence=ISO]
[GO:0050710 "negative regulation of cytokine secretion"
evidence=ISO] [GO:0050711 "negative regulation of interleukin-1
secretion" evidence=ISO] [GO:0050728 "negative regulation of
inflammatory response" evidence=ISO] RGD:1309415 GO:GO:0005524
GO:GO:0005737 GO:GO:0050728 GO:GO:0043124 GO:GO:0031953
GO:GO:0032088 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0008588 GO:GO:0045409
GO:GO:0050711 GeneTree:ENSGT00700000104141 CTD:91662
OrthoDB:EOG4TTGHK GO:GO:0045751 IPI:IPI00205289
RefSeq:NP_001162613.1 UniGene:Rn.108865 ProteinModelPortal:D4A399
Ensembl:ENSRNOT00000043650 GeneID:292541 KEGG:rno:292541
UCSC:RGD:1309415 NextBio:634266 ArrayExpress:D4A399 Uniprot:D4A399
Length = 1054
Score = 111 (44.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 41/125 (32%), Positives = 54/125 (43%)
Query: 215 SQLRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILELIPSTEKL 273
S L L L NALG +GVR L+ N L+ L L IS A Q + I + L
Sbjct: 706 SNLIELALYRNALGSQGVRLLCQGLRHANCKLQNLRLKRCHISGSACQDLAAAIIANRNL 765
Query: 274 KVLHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
L N G G + E ++H L+ + + A G ALA L +HL +L
Sbjct: 766 IRLDLSGNSIGVLGLELLCEGLQHPMCRLQMIQLRKCLLEAAAGRALASVLSNNSHLVEL 825
Query: 333 DLRDN 337
DL N
Sbjct: 826 DLTGN 830
Score = 67 (28.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 412 QFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGL 471
Q L +L+L N+L D GA+L+ + L +L + L + +A V L
Sbjct: 877 QSLMELDLGLNDLGDSGALLLCEGLRHPDCKLQTLRLGICRLGSDACAGVASVLQVNTCL 936
Query: 472 KMLNINGNFIPDEGIDEVKEILKH 495
+ L+++ N + D G+ + E L+H
Sbjct: 937 RELDLSFNDLGDRGLWLLGEGLRH 960
Score = 65 (27.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 21/82 (25%), Positives = 39/82 (47%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
L +L+L+ N+L D G L+G+ L +L ++ L + + L+ V L
Sbjct: 936 LRELDLSFNDLGDRGLWLLGEGLRHQTCRLQKLWLDSCGLTSKACEDLSSVLGISQTLNE 995
Query: 474 LNINGNFIPDEGIDEVKEILKH 495
L + N + D G+ + + L+H
Sbjct: 996 LYLTNNALGDTGVRLLCKRLRH 1017
>MGI|MGI:108445 [details] [associations]
symbol:Ciita "class II transactivator" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016605 "PML body"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0033613 "activating transcription factor binding" evidence=ISO]
[GO:0034341 "response to interferon-gamma" evidence=ISO;IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=ISO] [GO:0045348 "positive
regulation of MHC class II biosynthetic process" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046677 "response to antibiotic" evidence=ISO]
InterPro:IPR008095 PRINTS:PR01719 MGI:MGI:108445 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0032403 GO:GO:0045944
GO:GO:0046677 GO:GO:0006351 GO:GO:0000122 GO:GO:0044212
InterPro:IPR025875 Pfam:PF12799 GO:GO:0034341 InterPro:IPR007111
PROSITE:PS50837 CTD:4261 eggNOG:NOG269671 HOGENOM:HOG000107439
HOVERGEN:HBG000174 KO:K08060 OMA:PQAFPKL OrthoDB:EOG48PMJD
GO:GO:0045345 EMBL:AF000006 EMBL:AF000007 EMBL:AF042158
EMBL:AF042159 EMBL:AF100709 EMBL:AF100710 EMBL:U60653 EMBL:U46562
IPI:IPI00108982 IPI:IPI00115417 IPI:IPI00742270
RefSeq:NP_001230690.1 RefSeq:NP_031601.1 UniGene:Mm.249560
ProteinModelPortal:P79621 SMR:P79621 STRING:P79621
PhosphoSite:P79621 PRIDE:P79621 DNASU:12265
Ensembl:ENSMUST00000023147 GeneID:12265 KEGG:mmu:12265
UCSC:uc007ydr.1 UCSC:uc007yds.1 InParanoid:P79621 NextBio:280710
Bgee:P79621 CleanEx:MM_CIITA Genevestigator:P79621
GermOnline:ENSMUSG00000022504 Uniprot:P79621
Length = 1155
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 45/165 (27%), Positives = 77/165 (46%)
Query: 170 SRVAAPILRLIKD-QLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALG 228
S AA L I+D + E L + + +++ FSS L+ L +LS N +G
Sbjct: 969 SEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSS-LQHLDLD--SLSENKIG 1025
Query: 229 EKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEK-LKVLHFHNNMTGDEG 287
+KGV A LE L+L + I++ A + E +P+ K L L +NN D+G
Sbjct: 1026 DKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNCICDKG 1085
Query: 288 AVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
A ++++++ +L + A G LA +L +C ++ L
Sbjct: 1086 AKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETL 1130
>TAIR|locus:2143749 [details] [associations]
symbol:WPP3 "AT5G27940" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR InterPro:IPR025265 Pfam:PF13943
EMBL:AC007399 HOGENOM:HOG000239842 EMBL:BT030603 EMBL:AK228812
EMBL:AY085851 IPI:IPI00521488 RefSeq:NP_568504.1 UniGene:At.30777
IntAct:Q0WQ91 PRIDE:Q0WQ91 EnsemblPlants:AT5G27940.1 GeneID:832861
KEGG:ath:AT5G27940 TAIR:At5g27940 eggNOG:KOG0305 InParanoid:Q0WQ91
OMA:YKYGTIK PhylomeDB:Q0WQ91 Genevestigator:Q0WQ91 Uniprot:Q0WQ91
Length = 157
Score = 110 (43.8 bits), Expect = 0.00011, P = 0.00011
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 2 DSTTETLQHH---ALSVKLWPPSQSTRLMLVQRMTKNLTTPSIFSRKYGLLSXXXXXXXX 58
D+T+E + + +WPP Q +R +V M K L+T SI S KYG +
Sbjct: 35 DATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEEASAVA 94
Query: 59 XXXXXLAFAAANQHYEKEPDGDGSSSVQIYAKESSKLMLE 98
A+ A++ DG ++++Y E+S+ M+E
Sbjct: 95 KSIEEKAYDIASRFVSS----DGIKNLEVYGIETSERMIE 130
>UNIPROTKB|Q86W24 [details] [associations]
symbol:NLRP14 "NACHT, LRR and PYD domains-containing
protein 14" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] GO:GO:0007275
GO:GO:0005524 GO:GO:0030154 GO:GO:0007283 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837 eggNOG:NOG82860
HOGENOM:HOG000294064 HOVERGEN:HBG063656 EMBL:AY154469 EMBL:BK001107
IPI:IPI00219561 RefSeq:NP_789792.1 UniGene:Hs.449637
ProteinModelPortal:Q86W24 SMR:Q86W24 STRING:Q86W24
PhosphoSite:Q86W24 DMDM:38372322 PaxDb:Q86W24 PRIDE:Q86W24
DNASU:338323 Ensembl:ENST00000299481 GeneID:338323 KEGG:hsa:338323
UCSC:uc001mfb.1 CTD:338323 GeneCards:GC11P007017 HGNC:HGNC:22939
HPA:HPA039477 MIM:609665 neXtProt:NX_Q86W24 PharmGKB:PA162397917
InParanoid:Q86W24 OMA:TFPDGCQ OrthoDB:EOG4HDSSR PhylomeDB:Q86W24
GenomeRNAi:338323 NextBio:96933 Bgee:Q86W24 CleanEx:HS_NLRP14
Genevestigator:Q86W24 GermOnline:ENSG00000158077 Uniprot:Q86W24
Length = 1093
Score = 121 (47.7 bits), Expect = 0.00097, P = 0.00097
Identities = 64/270 (23%), Positives = 109/270 (40%)
Query: 231 GVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTE-KLKVLHFHN-NMTGDEGA 288
G + L NL L L I + +++ E + E KL+ L + N+T
Sbjct: 717 GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVF-CC 775
Query: 289 VAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALG--QCTHLKKLDLRDNMFGVEAGVA 346
+ IS + S +L S+ + +G L +AL +C +L++L L ++ EAG
Sbjct: 776 LNISNALIRSQSLIFLNLSTNNLLDDGVQLLCEALRHPKC-YLERLSL-ESCGLTEAGCE 833
Query: 347 -LSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXX 405
LS L + LT + L+ +L+ L L T
Sbjct: 834 YLSLALISNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLS 893
Query: 406 XXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVA 465
+ LT L+L N LQD G L+ L +++L + A LA V
Sbjct: 894 TSLLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVI 953
Query: 466 VNKPGLKMLNINGNFIPDEGIDEVKEILKH 495
+N P L+ L++ N + D+G+ + + L++
Sbjct: 954 LNNPNLRSLDLGNNDLQDDGVKILCDALRY 983
Score = 111 (44.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 49/204 (24%), Positives = 88/204 (43%)
Query: 156 TRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGS 215
T +C ++ G G ++ + L Q + L + R +L + +S L
Sbjct: 846 THLCLADNVLGDGGVKLMSDAL-----QHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNK 900
Query: 216 QLRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILELIPSTEKLK 274
L +L+L N L + GV+ + + + NL++L LM ++ + +I + L+
Sbjct: 901 SLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLR 960
Query: 275 VLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEG-GIA------LAKALGQCT 327
L NN D+G + + +++ P C+ R+G E G+ L+ AL
Sbjct: 961 SLDLGNNDLQDDGVKILCDALRY-P-----NCNIQRLGLEYCGLTSLCCQDLSSALICNK 1014
Query: 328 HLKKLDLRDNMFGVEAGVALSEVL 351
L K++L N G E V L +VL
Sbjct: 1015 RLIKMNLTQNTLGYEGIVKLYKVL 1038
Score = 108 (43.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 42/148 (28%), Positives = 72/148 (48%)
Query: 205 INMFSSALEGSQLRYLNLSHNALGEKGVRAF-GALLKSQNNLEELHLMNDGISEEAAQAI 263
+N+ ++ + L +LNLS N L + GV+ AL + LE L L + G++E + +
Sbjct: 776 LNISNALIRSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYL 835
Query: 264 LELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDF---RCSSTRIGAEGGIAL 319
+ S ++L L +N+ GD G +S+ ++H+ L+ RC T + +E L
Sbjct: 836 SLALISNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSE---YL 892
Query: 320 AKALGQCTHLKKLDLRDNMFGVEAGVAL 347
+ +L L LDL N + GV L
Sbjct: 893 STSLLHNKSLTHLDLGSNWLQ-DNGVKL 919
Score = 67 (28.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
L K+NL +N L EG + + K L+ +L + L + +LL V V+ P L +
Sbjct: 1016 LIKMNLTQNTLGYEGIVKLYKVLKSPKCKLQVLGLCKEAFDEEAQKLLEAVGVSNPHL-I 1074
Query: 474 LNINGNFIPDEGI 486
+ + N+ +E +
Sbjct: 1075 IKPDCNYHNEEDV 1087
>UNIPROTKB|P59047 [details] [associations]
symbol:NLRP5 "NACHT, LRR and PYD domains-containing protein
5" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0043487 "regulation
of RNA stability" evidence=IEA] [GO:0043623 "cellular protein
complex assembly" evidence=IEA] [GO:0045179 "apical cortex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 GO:GO:0043234 GO:GO:0005730 GO:GO:0001701
GO:GO:0009566 GO:GO:0009887 GO:GO:0045179 GO:GO:0031647
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 GO:GO:0043623
GO:GO:0007566 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0043487
HOGENOM:HOG000294064 HOVERGEN:HBG063656 CTD:126206 eggNOG:NOG147585
OrthoDB:EOG44XJG0 EMBL:AY054986 EMBL:AY154460 EMBL:AC011470
EMBL:AC024580 IPI:IPI00168282 RefSeq:NP_703148.4 UniGene:Hs.356872
ProteinModelPortal:P59047 SMR:P59047 STRING:P59047
PhosphoSite:P59047 DMDM:215274029 PRIDE:P59047 DNASU:126206
Ensembl:ENST00000390649 GeneID:126206 KEGG:hsa:126206
UCSC:uc002qmi.3 GeneCards:GC19P056511 H-InvDB:HIX0040046
HGNC:HGNC:21269 MIM:609658 neXtProt:NX_P59047 PharmGKB:PA162397970
InParanoid:P59047 OMA:SQAMEQE PhylomeDB:P59047 GenomeRNAi:126206
NextBio:81718 Bgee:P59047 CleanEx:HS_NLRP5 Genevestigator:P59047
GermOnline:ENSG00000171487 Uniprot:P59047
Length = 1200
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 67/283 (23%), Positives = 114/283 (40%)
Query: 225 NALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTG 284
NA GV+ ++ + NL L+L + EE + E + + L + + G
Sbjct: 819 NAQITPGVQHLWRIVMANRNLRSLNLGGTHLKEEDVRMACEALKHPKCL-LESLRLDCCG 877
Query: 285 DEGA--VAISEIVKHSPALEDFRCSSTRIGAEGGIALAKAL--GQCTHLKKLDLRDNMFG 340
A + IS+I+ SP+L+ + ++ +G + L+ AL QC L+KL L D
Sbjct: 878 LTHACYLKISQILTTSPSLKSLSLAGNKVTDQGVMPLSDALRVSQCA-LQKLILEDCGIT 936
Query: 341 VEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXX 400
+L+ L + LT + LS SL+ L L +
Sbjct: 937 ATGCQSLASALVSNRSLTHLCLSNNSLGNEGVNLLCRSMRLPHCSLQRLMLNQCHLDTAG 996
Query: 401 XXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARL 460
+LT L+L+ N ++D G L+ + + E L +++L + A
Sbjct: 997 CGFLALALMGNSWLTHLSLSMNPVEDNGVKLLCEVMREPSCHLQDLELVKCHLTAACCES 1056
Query: 461 LAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKHSLDVLGPL 503
L+ V LK L++ N + D G+ + E LK VL L
Sbjct: 1057 LSCVISRSRHLKSLDLTDNALGDGGVAALCEGLKQKNSVLARL 1099
>MGI|MGI:1345193 [details] [associations]
symbol:Nlrp5 "NLR family, pyrin domain containing 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005938 "cell cortex"
evidence=IDA] [GO:0007566 "embryo implantation" evidence=IMP]
[GO:0009566 "fertilization" evidence=IMP] [GO:0009887 "organ
morphogenesis" evidence=IMP] [GO:0031647 "regulation of protein
stability" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043487 "regulation of RNA stability"
evidence=IMP] [GO:0043623 "cellular protein complex assembly"
evidence=IMP] [GO:0045179 "apical cortex" evidence=IDA]
MGI:MGI:1345193 GO:GO:0005829 GO:GO:0005739 GO:GO:0005524
GO:GO:0043234 GO:GO:0005730 GO:GO:0001701 GO:GO:0009566
GO:GO:0009887 GO:GO:0045179 GO:GO:0031647 GO:GO:0043623
GO:GO:0007566 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0043487
HOVERGEN:HBG063656 GeneTree:ENSGT00700000104427 CTD:126206
eggNOG:NOG147585 OrthoDB:EOG44XJG0 EMBL:AF074018 EMBL:AF143573
EMBL:AF143559 EMBL:AF143560 EMBL:AF143561 EMBL:AF143562
EMBL:AF143563 EMBL:AF143564 EMBL:AF143565 EMBL:AF143566
EMBL:AF143567 EMBL:AF143568 EMBL:AF143569 EMBL:AF143570
EMBL:AF143571 EMBL:AF143572 EMBL:AY196361 EMBL:AY196362
EMBL:AY329484 EMBL:AY329485 EMBL:AY329486 EMBL:AY329487
EMBL:AY329488 EMBL:AY329489 EMBL:AY329490 EMBL:AY329491
EMBL:BC053384 EMBL:AK135731 IPI:IPI00128823 IPI:IPI00720034
IPI:IPI00845527 IPI:IPI00845602 IPI:IPI00845607 IPI:IPI00845650
IPI:IPI00845699 IPI:IPI00845787 PIR:A59000 RefSeq:NP_001034232.1
RefSeq:NP_035990.1 UniGene:Mm.333653 ProteinModelPortal:Q9R1M5
SMR:Q9R1M5 IntAct:Q9R1M5 STRING:Q9R1M5 PhosphoSite:Q9R1M5
PRIDE:Q9R1M5 Ensembl:ENSMUST00000015866 Ensembl:ENSMUST00000086341
Ensembl:ENSMUST00000108441 Ensembl:ENSMUST00000133237
Ensembl:ENSMUST00000139661 GeneID:23968 KEGG:mmu:23968
UCSC:uc009foe.1 UCSC:uc009fof.1 UCSC:uc012fev.1 InParanoid:Q9R1M5
OMA:QEVWLLI NextBio:303841 Bgee:Q9R1M5 CleanEx:MM_NLRP5
Genevestigator:Q9R1M5 GermOnline:ENSMUSG00000015721 Uniprot:Q9R1M5
Length = 1163
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 143 LLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEAL 202
LL+ L N T +C SN S G + LR + L + L+ ++A
Sbjct: 905 LLVSALFSNQN-LTHLCLSNNSLGTEGVQQLCQFLRNPECALQRLILNHC---NIVDDAY 960
Query: 203 EVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQ 261
+ M ++L +L+L+ N +G+ ++ LK L+EL L++ +++ +
Sbjct: 961 GFLAM--RLANNTKLTHLSLTMNPVGDGAMKLLCEALKEPTCYLQELELVDCQLTQNCCE 1018
Query: 262 AILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALA 320
+ +I +T+ LK L NN GD+G + + E +K S + L + ++ + AL+
Sbjct: 1019 DLACMITTTKHLKSLDLGNNALGDKGVITLCEGLKQSSSSLRRLGLGACKLTSNCCEALS 1078
Query: 321 KALGQCTHLKKLDLRDNMFGVEAGVAL 347
A+ HL L+L N F + L
Sbjct: 1079 LAISCNPHLNSLNLVKNDFSTSGMLKL 1105
>RGD|1560291 [details] [associations]
symbol:RGD1560291 "similar to NACHT, leucine rich repeat and PYD
containing 4A" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] RGD:1560291 GO:GO:0005524 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00700000104141 OrthoDB:EOG4N04DB IPI:IPI00391990
Ensembl:ENSRNOT00000029672 UCSC:RGD:1560291 Uniprot:D3ZE70
Length = 936
Score = 94 (38.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/84 (28%), Positives = 47/84 (55%)
Query: 412 QFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGL 471
+ L L+++ NEL+D+G ++ K+L + L + ++ + +G + LA+V N L
Sbjct: 802 KILCHLDISNNELKDKGLKILCKALTLPNCVLKSLCMTHCLITSSGCQDLAEVLRNNQNL 861
Query: 472 KMLNINGNFIPDEGIDEVKEILKH 495
K L I+ N + D G+ + + +KH
Sbjct: 862 KGLQISNNKLEDAGVKLLCDAIKH 885
Score = 82 (33.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 31/135 (22%), Positives = 67/135 (49%)
Query: 206 NMFSSALEGSQLRYLNLSHNALGEKGVRAFGALL-KSQNNLEELHLMNDGISEEAAQAIL 264
++F ++ L+YL+ S L V +L +++ N+E+L + + +S + Q
Sbjct: 680 HLFFEFIQNHNLQYLDFSFTCLSHINVELLCDVLNQAECNVEKLVVEHCNLSPDDCQNFA 739
Query: 265 ELIPSTEKLKVLHFH-NNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKA 322
++ +++ LK+L+ NN+ D+G ++ + + H LE+ + + + L+ A
Sbjct: 740 FVLMNSKTLKILNLACNNL--DKGIYSLCKALCHPNCILENLVLDNCSLSEQCWDYLSDA 797
Query: 323 LGQCTHLKKLDLRDN 337
L Q L LD+ +N
Sbjct: 798 LRQNKILCHLDISNN 812
>DICTYBASE|DDB_G0285563 [details] [associations]
symbol:DDB_G0285563 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285563 EMBL:AAFI02000079 eggNOG:KOG4308
RefSeq:XP_638127.1 ProteinModelPortal:Q54N16
EnsemblProtists:DDB0304945 GeneID:8625176 KEGG:ddi:DDB_G0285563
InParanoid:Q54N16 OMA:SNHIGDE Uniprot:Q54N16
Length = 283
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 38/151 (25%), Positives = 75/151 (49%)
Query: 176 ILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALE-GSQLRYLNLSHNALGEKGVRA 234
I ++I++ T L DF +++ +I+M +LE S + +N + L +
Sbjct: 108 IQQIIENSTTLTTL-DFSNIEIDKKRASLISM---SLETNSTILSMNFEYCYLDNDSIIQ 163
Query: 235 FGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEI 294
L+ ++ EL N+ I + A AI ++ + ++ ++ NN G++GA+++++I
Sbjct: 164 LCRGLEKNKSIIELDFNNNKIGPQGALAIANMLKVNKSIETINLSNNEIGNQGAMSMADI 223
Query: 295 VKHSPALEDFRCSSTRIGAEGGIALAKALGQ 325
+K + SS IG EG +A+ KA Q
Sbjct: 224 LKTTKRNVKLNLSSNHIGDEGVLAIVKARQQ 254
>UNIPROTKB|F1PS72 [details] [associations]
symbol:NLRP13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104427
EMBL:AAEX03000720 Ensembl:ENSCAFT00000003974 OMA:LITTKEY
Uniprot:F1PS72
Length = 1093
Score = 118 (46.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
LT LNL N+L+DEG + K+L L +DLS S G + LA + +K+
Sbjct: 906 LTHLNLRRNKLRDEGVKFLCKALSHPDCSLQNLDLSDCSFTADGCQELANALRHNHNMKI 965
Query: 474 LNINGNFIPDEGIDEVKEILKH---SLDVLG 501
L+I N + D G+ + E+L+ L+ LG
Sbjct: 966 LDIRNNDVQDNGVKHLCEVLQDPYCELNTLG 996
Score = 57 (25.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 22/89 (24%), Positives = 41/89 (46%)
Query: 202 LEVINMFSSALEGS-QLRYLNLSHNALGEK-GVRAFGALLKSQNNLEELHLMNDGISEEA 259
++++ L G+ +L +LNLS N LG F L S NL+ L L + G++
Sbjct: 721 VKILKELVLVLHGNNRLTHLNLSSNNLGVPVSTMIFKTLRHSACNLQYLWLESCGLTPLV 780
Query: 260 AQAILELIPSTEKLKVLHF-HNNMTGDEG 287
+ + + + L N+++G +G
Sbjct: 781 CRHLFVELSRNSSVSFLSLGDNDLSGMKG 809
>UNIPROTKB|P33076 [details] [associations]
symbol:CIITA "MHC class II transactivator" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0016605 "PML body" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003713 "transcription coactivator activity"
evidence=TAS] [GO:0006955 "immune response" evidence=TAS]
[GO:0046677 "response to antibiotic" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0060333
"interferon-gamma-mediated signaling pathway" evidence=TAS]
[GO:0045345 "positive regulation of MHC class I biosynthetic
process" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045348 "positive regulation of MHC class II biosynthetic
process" evidence=IC] [GO:0034341 "response to interferon-gamma"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0032966 "negative regulation of collagen
biosynthetic process" evidence=IC] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR001611
InterPro:IPR008095 PRINTS:PR01719 PROSITE:PS51450 GO:GO:0005524
Reactome:REACT_6900 GO:GO:0005654 GO:GO:0060333 GO:GO:0032403
GO:GO:0045944 GO:GO:0046677 GO:GO:0032966 GO:GO:0006351
EMBL:CH471112 GO:GO:0000122 GO:GO:0044212 GO:GO:0003713
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111 PROSITE:PS50837
EMBL:X74301 EMBL:U18259 EMBL:AC133065 IPI:IPI00186224 PIR:A48843
RefSeq:NP_000237.2 UniGene:Hs.701991 ProteinModelPortal:P33076
SMR:P33076 IntAct:P33076 STRING:P33076 PhosphoSite:P33076
DMDM:218511957 PaxDb:P33076 PRIDE:P33076 DNASU:4261
Ensembl:ENST00000324288 GeneID:4261 KEGG:hsa:4261 UCSC:uc002dag.2
CTD:4261 GeneCards:GC16P010879 HGNC:HGNC:7067 HPA:CAB016084
MIM:209920 MIM:600005 neXtProt:NX_P33076 Orphanet:572
PharmGKB:PA30795 eggNOG:NOG269671 HOGENOM:HOG000107439
HOVERGEN:HBG000174 KO:K08060 OMA:PQAFPKL OrthoDB:EOG48PMJD
PhylomeDB:P33076 GenomeRNAi:4261 NextBio:16805 ArrayExpress:P33076
Bgee:P33076 CleanEx:HS_CIITA Genevestigator:P33076
GermOnline:ENSG00000179583 GO:GO:0045345 GO:GO:0045348
Uniprot:P33076
Length = 1130
Score = 127 (49.8 bits), Expect = 0.00023, P = 0.00023
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 215 SQLRYLNL---SHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPS-T 270
S L++L+L S N +G++GV A +LE L+L + I++ A + E +PS
Sbjct: 984 SSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLAEALPSLA 1043
Query: 271 EKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLK 330
L L +NN D GA +++ ++ +L + A G LA +L +C H++
Sbjct: 1044 ASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLRRCPHVE 1103
Query: 331 KL 332
L
Sbjct: 1104 TL 1105
>UNIPROTKB|E1B8B1 [details] [associations]
symbol:LRRC45 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005813 "centrosome" evidence=IEA] GO:GO:0005813
GeneTree:ENSGT00640000091171 CTD:201255 OMA:SDHREAL
EMBL:DAAA02049407 EMBL:DAAA02049408 EMBL:DAAA02049409
EMBL:DAAA02049410 IPI:IPI00840853 RefSeq:XP_003583683.1
UniGene:Bt.45080 Ensembl:ENSBTAT00000042654 GeneID:514524
KEGG:bta:514524 Uniprot:E1B8B1
Length = 644
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 47/183 (25%), Positives = 78/183 (42%)
Query: 157 RICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQ 216
R+ + +S + R +L+ + LTE+ LSD + EE ++ +
Sbjct: 34 RLDLATQSLTVDTCRALGKLLQK-ESLLTELILSDCMLS---EEGATLL--LQGLCVNTA 87
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLM--NDGISEEAAQAILELIPSTEKLK 274
+R+L+L N L G A LL+ +++ L L N G +EA + + L+
Sbjct: 88 VRFLDLKGNNLRAAGAEALAKLLRQNKSIQSLTLEWNNLGTWDEAFATFCGALAANGALR 147
Query: 275 VLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDL 334
L NN +GA ++ +K + +L+ IG GG AL L L KL+L
Sbjct: 148 QLDLRNNQINHKGAEELALALKSNASLQQLDLRWNHIGLLGGRALVNCLPSNRTLWKLEL 207
Query: 335 RDN 337
N
Sbjct: 208 AGN 210
>UNIPROTKB|F1MKL3 [details] [associations]
symbol:NLRP9 "NACHT, LRR and PYD domains-containing protein
9" species:9913 "Bos taurus" [GO:0005524 "ATP binding"
evidence=IEA] GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104141
OMA:NEIQDAG UniGene:Bt.32473 EMBL:DAAA02047732 EMBL:DAAA02047730
EMBL:DAAA02047731 IPI:IPI01017789 ProteinModelPortal:F1MKL3
Ensembl:ENSBTAT00000006201 Uniprot:F1MKL3
Length = 996
Score = 125 (49.1 bits), Expect = 0.00032, P = 0.00032
Identities = 42/142 (29%), Positives = 61/142 (42%)
Query: 212 LEGSQLRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILELIPST 270
L L +L+L N L ++GV LK + NL+EL LMN + I ++ +
Sbjct: 801 LYNRSLTFLDLGSNVLKDEGVTTLCESLKHPSCNLQELWLMNCYFTSVCCVDIATVLIHS 860
Query: 271 EKLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKALGQCTHL 329
EKLK L NN D GA + + +KH LE+ + + LA AL C L
Sbjct: 861 EKLKTLKLGNNKIYDAGAKQLCKALKHPKCKLENLGLEACELSPASCEDLASALTTCKSL 920
Query: 330 KKLDLRDNMFGVEAGVALSEVL 351
++L + L E L
Sbjct: 921 TCVNLEWITLDYDGAAVLCEAL 942
>UNIPROTKB|Q288C4 [details] [associations]
symbol:NLRP9 "NACHT, LRR and PYD domains-containing protein
9" species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524 GO:GO:0005737
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 HOGENOM:HOG000294064 HOVERGEN:HBG063656
OrthoDB:EOG4N04DB eggNOG:NOG148799 EMBL:DQ011673 EMBL:DQ092866
IPI:IPI00705662 RefSeq:NP_001019835.1 UniGene:Bt.32473
ProteinModelPortal:Q288C4 STRING:Q288C4 PRIDE:Q288C4 GeneID:520716
KEGG:bta:520716 CTD:338321 InParanoid:Q288C4 NextBio:20873163
Uniprot:Q288C4
Length = 996
Score = 125 (49.1 bits), Expect = 0.00032, P = 0.00032
Identities = 42/142 (29%), Positives = 61/142 (42%)
Query: 212 LEGSQLRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILELIPST 270
L L +L+L N L ++GV LK + NL+EL LMN + I ++ +
Sbjct: 801 LYNRSLTFLDLGSNVLKDEGVTTLCESLKHPSCNLQELWLMNCYFTSVCCVDIATVLIHS 860
Query: 271 EKLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKALGQCTHL 329
EKLK L NN D GA + + +KH LE+ + + LA AL C L
Sbjct: 861 EKLKTLKLGNNKIYDAGAKQLCKALKHPKCKLENLGLEACELSPASCEDLASALTTCKSL 920
Query: 330 KKLDLRDNMFGVEAGVALSEVL 351
++L + L E L
Sbjct: 921 TCVNLEWITLDYDGAAVLCEAL 942
>UNIPROTKB|F1LSE8 [details] [associations]
symbol:Ciita "Protein Ciita" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 RGD:619813 GO:GO:0005524
GO:GO:0006355 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111
PROSITE:PS50837 IPI:IPI00391658 Ensembl:ENSRNOT00000030118
Uniprot:F1LSE8
Length = 1063
Score = 125 (49.1 bits), Expect = 0.00035, P = 0.00035
Identities = 44/162 (27%), Positives = 74/162 (45%)
Query: 173 AAPILRLIKD-QLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKG 231
AA L I+D + E L + + +++ FSS L+ L +LS N +G+KG
Sbjct: 880 AAKDLPAIRDLKKLEFALGPVLGPQAFPTLAKILPAFSS-LQHLDLD--SLSENKIGDKG 936
Query: 232 VRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEK-LKVLHFHNNMTGDEGAVA 290
V A LE L+L + I++ A + E +P+ K L L +NN DEGA +
Sbjct: 937 VSKLSATFPQLKALETLNLSQNSITDVGACKLAEALPALAKSLLRLSLYNNCICDEGAKS 996
Query: 291 ISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
++ ++ +L + A G L +L +C ++ L
Sbjct: 997 LARVLPDMVSLRVMDVQFNKFTAVGAQQLTSSLQKCPQVETL 1038
>UNIPROTKB|G3V9V5 [details] [associations]
symbol:Ciita "Protein Ciita" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 RGD:619813 GO:GO:0005524
GO:GO:0006355 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111
PROSITE:PS50837 CTD:4261 KO:K08060 EMBL:CH474017 UniGene:Rn.162013
GeneID:85483 KEGG:rno:85483 RefSeq:NP_001257732.1
Ensembl:ENSRNOT00000064827 Uniprot:G3V9V5
Length = 1073
Score = 125 (49.1 bits), Expect = 0.00035, P = 0.00035
Identities = 44/162 (27%), Positives = 74/162 (45%)
Query: 173 AAPILRLIKD-QLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKG 231
AA L I+D + E L + + +++ FSS L+ L +LS N +G+KG
Sbjct: 890 AAKDLPAIRDLKKLEFALGPVLGPQAFPTLAKILPAFSS-LQHLDLD--SLSENKIGDKG 946
Query: 232 VRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEK-LKVLHFHNNMTGDEGAVA 290
V A LE L+L + I++ A + E +P+ K L L +NN DEGA +
Sbjct: 947 VSKLSATFPQLKALETLNLSQNSITDVGACKLAEALPALAKSLLRLSLYNNCICDEGAKS 1006
Query: 291 ISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
++ ++ +L + A G L +L +C ++ L
Sbjct: 1007 LARVLPDMVSLRVMDVQFNKFTAVGAQQLTSSLQKCPQVETL 1048
>TAIR|locus:2039027 [details] [associations]
symbol:AT2G20210 "AT2G20210" species:3702 "Arabidopsis
thaliana" [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] EMBL:CP002685 IPI:IPI00531808 RefSeq:NP_179611.2
UniGene:At.39728 ProteinModelPortal:F4IUG1 SMR:F4IUG1
EnsemblPlants:AT2G20210.1 GeneID:816540 KEGG:ath:AT2G20210
OMA:RWIRSEK Uniprot:F4IUG1
Length = 604
Score = 122 (48.0 bits), Expect = 0.00036, P = 0.00036
Identities = 49/201 (24%), Positives = 87/201 (43%)
Query: 198 EEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAF-GALLKSQNN-LEELHLMNDGI 255
E + + N+ + L L L+LS N + + G+R+ K+ ++ L +L+L N +
Sbjct: 366 ELDRYDAENLAHALLHMPGLESLDLSGNPIEDSGIRSLISYFTKNPDSRLADLNLENCEL 425
Query: 256 SEEAAQAILELIPSTEK-LKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAE 314
S L+ + EK LK L +N G E A A+ + + ++E +G
Sbjct: 426 SCCGVIEFLDTLSMLEKPLKFLSVADNALGSEVAEAV--VNSFTISIESLNIMGIGLGPL 483
Query: 315 GGIALAKALGQCTH-LKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXX 373
G +AL + L + + L +++ N G+E LS+++P P L + SY
Sbjct: 484 GFLALGRKLEKVSKKLLSINISKNRGGLETARFLSKLIPLAPKLISIDASYNLMPPEALL 543
Query: 374 XXXXXXXXCAPSLEVLDLAGN 394
L+ LD+ GN
Sbjct: 544 MLCDSLRTAKGDLKRLDMTGN 564
>RGD|619813 [details] [associations]
symbol:Ciita "class II, major histocompatibility complex,
transactivator" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006954 "inflammatory response" evidence=IEP] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0016605 "PML body"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0033613 "activating transcription factor binding" evidence=ISO]
[GO:0034341 "response to interferon-gamma" evidence=ISO]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=ISO] [GO:0045348 "positive
regulation of MHC class II biosynthetic process" evidence=IEP;IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0046677 "response to antibiotic" evidence=ISO] [GO:0071346
"cellular response to interferon-gamma" evidence=IEP]
InterPro:IPR008095 PRINTS:PR01719 RGD:619813 GO:GO:0005524
GO:GO:0006954 GO:GO:0045944 GO:GO:0000122 GO:GO:0071346
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111 PROSITE:PS50837
HOGENOM:HOG000107439 HOVERGEN:HBG000174 GO:GO:0045348
UniGene:Rn.162013 EMBL:AF251305 IPI:IPI00190599
ProteinModelPortal:Q9GJE0 STRING:Q9GJE0 PRIDE:Q9GJE0
UCSC:RGD:619813 InParanoid:Q9GJE0 NextBio:617566
ArrayExpress:Q9GJE0 Genevestigator:Q9GJE0 Uniprot:Q9GJE0
Length = 1153
Score = 125 (49.1 bits), Expect = 0.00038, P = 0.00038
Identities = 44/162 (27%), Positives = 74/162 (45%)
Query: 173 AAPILRLIKD-QLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKG 231
AA L I+D + E L + + +++ FSS L+ L +LS N +G+KG
Sbjct: 970 AAKDLPAIRDLKKLEFALGPVLGPQAFPTLAKILPAFSS-LQHLDLD--SLSENKIGDKG 1026
Query: 232 VRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEK-LKVLHFHNNMTGDEGAVA 290
V A LE L+L + I++ A + E +P+ K L L +NN DEGA +
Sbjct: 1027 VSKLSATFPQLKALETLNLSQNSITDVGACKLAEALPALAKSLLRLSLYNNCICDEGAKS 1086
Query: 291 ISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
++ ++ +L + A G L +L +C ++ L
Sbjct: 1087 LARVLPDMVSLRVMDVQFNKFTAVGAQQLTSSLQKCPQVETL 1128
>UNIPROTKB|G3V6C0 [details] [associations]
symbol:Ciita "Class II, major histocompatibility complex,
transactivator, isoform CRA_c" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0034341 "response to interferon-gamma" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046677 "response to antibiotic" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 RGD:619813 GO:GO:0005524
GO:GO:0006355 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111
PROSITE:PS50837 CTD:4261 KO:K08060 OMA:PQAFPKL
GeneTree:ENSGT00660000095240 EMBL:CH474017 RefSeq:NP_445981.2
UniGene:Rn.162013 Ensembl:ENSRNOT00000003572 GeneID:85483
KEGG:rno:85483 Uniprot:G3V6C0
Length = 1153
Score = 125 (49.1 bits), Expect = 0.00038, P = 0.00038
Identities = 44/162 (27%), Positives = 74/162 (45%)
Query: 173 AAPILRLIKD-QLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKG 231
AA L I+D + E L + + +++ FSS L+ L +LS N +G+KG
Sbjct: 970 AAKDLPAIRDLKKLEFALGPVLGPQAFPTLAKILPAFSS-LQHLDLD--SLSENKIGDKG 1026
Query: 232 VRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEK-LKVLHFHNNMTGDEGAVA 290
V A LE L+L + I++ A + E +P+ K L L +NN DEGA +
Sbjct: 1027 VSKLSATFPQLKALETLNLSQNSITDVGACKLAEALPALAKSLLRLSLYNNCICDEGAKS 1086
Query: 291 ISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
++ ++ +L + A G L +L +C ++ L
Sbjct: 1087 LARVLPDMVSLRVMDVQFNKFTAVGAQQLTSSLQKCPQVETL 1128
>UNIPROTKB|Q86W25 [details] [associations]
symbol:NLRP13 "NACHT, LRR and PYD domains-containing
protein 13" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 HOGENOM:HOG000294064
EMBL:AY154468 EMBL:BK001108 IPI:IPI00249591 RefSeq:NP_789780.2
UniGene:Hs.446924 ProteinModelPortal:Q86W25 SMR:Q86W25
PhosphoSite:Q86W25 DMDM:145559500 PaxDb:Q86W25 PRIDE:Q86W25
DNASU:126204 Ensembl:ENST00000342929 GeneID:126204 KEGG:hsa:126204
UCSC:uc010ygg.2 CTD:126204 GeneCards:GC19M056407 H-InvDB:HIX0040054
HGNC:HGNC:22937 MIM:609660 neXtProt:NX_Q86W25 PharmGKB:PA162397891
eggNOG:NOG146595 InParanoid:Q86W25 OMA:ENLHELD OrthoDB:EOG40VVNS
PhylomeDB:Q86W25 GenomeRNAi:126204 NextBio:81710 Bgee:Q86W25
CleanEx:HS_NLRP13 Genevestigator:Q86W25 GermOnline:ENSG00000173572
Uniprot:Q86W25
Length = 1043
Score = 124 (48.7 bits), Expect = 0.00044, P = 0.00044
Identities = 61/266 (22%), Positives = 103/266 (38%)
Query: 239 LKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHNNMTGDEGAVAISEI-VKH 297
L + NL EL L N + + + + L + KV E + I ++
Sbjct: 722 LVTNENLHELDLSNSKLHASSVKGLC-LALKNPRCKVQKLTCKSVTPEWVLQDLIIALQG 780
Query: 298 SPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDL 357
+ L SS ++G + L +LK L L + L+ L + +
Sbjct: 781 NSKLTHLNFSSNKLGMTVPLILKALRHSACNLKYLCLEKCNLSAASCQDLALFLTSIQHV 840
Query: 358 TEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKL 417
T + L + +LE L+L + + LT L
Sbjct: 841 TRLCLGFNRLQDDGIKLLCAALTHPKCALERLELWFCQLAAPACKHLSDALLQNRSLTHL 900
Query: 418 NLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNIN 477
NL++N L+DEG + ++L G L ++LS S R G LA + +K+L++
Sbjct: 901 NLSKNSLRDEGVKFLCEALGRPDGNLQSLNLSGCSFTREGCGELANALSHNHNVKILDLG 960
Query: 478 GNFIPDEGIDEVKEILK-H-SLDVLG 501
N + D+G+ + E LK H +L LG
Sbjct: 961 ENDLQDDGVKLLCEALKPHRALHTLG 986
>UNIPROTKB|E2R230 [details] [associations]
symbol:NLRP12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104141
EMBL:AAEX03000742 Ensembl:ENSCAFT00000004310 OMA:GICRLSS
Uniprot:E2R230
Length = 1059
Score = 124 (48.7 bits), Expect = 0.00044, P = 0.00044
Identities = 63/275 (22%), Positives = 106/275 (38%)
Query: 225 NALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELI--PSTEKLKVLHFHNNM 282
N L + + A L + NL EL L + + + + + PS KL+ L
Sbjct: 693 NVLPDAYSKQLAAALSTNPNLTELVLYRSALGSRGVRLLCQGLRHPSC-KLQNLSLKRCC 751
Query: 283 TGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALG--QCTHLKKLDLRDNMFG 340
++ + + L SS R+G G AL K L +C L+ + LR
Sbjct: 752 VASSACQDLAAALMANQNLRRMDLSSNRLGLPGLRALCKGLRHPRCK-LQVIQLRKCQLE 810
Query: 341 VEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXXXXXXXXXCAPSLEVLDLAGNDITXXX 400
EA ++ VL L E+ L+ L++L L +T
Sbjct: 811 AEACQEIASVLSTSRHLEELDLTGNALEDLGLKLLCQGLRHPVCRLQILWLKICHLTAAA 870
Query: 401 XXXXXXXXXXXQFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARL 460
Q L +L+L+ N+L D G +L+ + L +L + L + A +
Sbjct: 871 CEDLASTLGVNQSLIELDLSLNDLGDPGVLLLCEGLRHPQCRLQALRLGICRLSSAACKG 930
Query: 461 LAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILKH 495
L V P L+ L+++ N + D G+ + E L+H
Sbjct: 931 LCTVLQVNPCLRDLDLSFNDLGDAGVWPLCEGLRH 965
>UNIPROTKB|E1BDZ4 [details] [associations]
symbol:LOC782386 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524 GO:GO:0007283
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 OMA:TFPDGCQ GeneTree:ENSGT00700000104427
EMBL:DAAA02040807 IPI:IPI00690027 Ensembl:ENSBTAT00000002954
Uniprot:E1BDZ4
Length = 1095
Score = 124 (48.7 bits), Expect = 0.00046, P = 0.00046
Identities = 67/301 (22%), Positives = 120/301 (39%)
Query: 198 EEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISE 257
+E A+++ N+ +L+ L L + + G+L +QN L L L I +
Sbjct: 689 DELAMKIFNL-ELRHPNCKLQKLRLRFTSFPDLCQGISGSLTHNQN-LIHLDLKGSDIGD 746
Query: 258 EAAQAILELIPSTE-KLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGG 316
+ +++ E + + KL+ L + + IS+ + S +L S+ + +G
Sbjct: 747 DGVKSLCEALKHPDCKLQSLSLESCDLTTVCCLNISKALVRSQSLLSLNLSTNNLLDDGV 806
Query: 317 IALAKAL--GQCTHLKKLDLRDNMFGVEAGVALSEVLPAFPDLTEVYLSYXXXXXXXXXX 374
L + L +C +L+KL L V LS VL + LT + L+
Sbjct: 807 KLLCEGLMHPKC-NLEKLSLESCGLTVACCEDLSLVLISNKRLTHLCLADNMLGDGGVKF 865
Query: 375 XXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEGAILIGK 434
L+ L L T + L L+L N LQD+G L+
Sbjct: 866 MSEALKHPQCILQSLVLRRCHFTSLSSESLSASLLHNKSLMHLDLGSNCLQDDGVKLLCD 925
Query: 435 SLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDEVKEILK 494
+ L +++L + A LA +N P L+ L++ N + D+G+ + E L+
Sbjct: 926 AFRHPSCSLQDLELMGCVLTSACCLDLASAILNNPNLQSLDLGNNDLRDDGVKFLFEALR 985
Query: 495 H 495
H
Sbjct: 986 H 986
>MGI|MGI:2675292 [details] [associations]
symbol:Nlrp9a "NLR family, pyrin domain containing 9A"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
MGI:MGI:2675292 GO:GO:0005524 GO:GO:0005737 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00700000104141 HOGENOM:HOG000294064
HOVERGEN:HBG063656 HSSP:P10775 EMBL:AY596202 EMBL:AY364009
IPI:IPI00377936 IPI:IPI00471049 RefSeq:NP_001041685.1
UniGene:Mm.11889 ProteinModelPortal:Q66X03 SMR:Q66X03 PRIDE:Q66X03
DNASU:233001 Ensembl:ENSMUST00000117252 GeneID:233001
KEGG:mmu:233001 UCSC:uc012fge.1 CTD:233001 eggNOG:NOG148799
NextBio:381438 Bgee:Q66X03 CleanEx:MM_NLRP9A Genevestigator:Q66X03
Uniprot:Q66X03
Length = 949
Score = 98 (39.6 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 56/195 (28%), Positives = 82/195 (42%)
Query: 207 MFSSALEGSQLRYLNLSHNALGEKGVRAFGALLK-SQNNLEELHLMNDGISEEAAQAILE 265
+F + L L+Y+NL L V + LK S +EEL L IS EA I
Sbjct: 630 LFCTFLHLPHLKYMNLYGTNLSNDAVERLCSALKFSTCGVEELLLGKCDISSEACGIIAA 689
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKH-SPALEDFRCSSTRIGAEGGIALAKALG 324
+ ++E +K L N ++G +++ E++K S LE S + L +AL
Sbjct: 690 SLINSE-VKHLSLVENPLKNKGVMSLCEMLKDPSCVLESLMLSYCCLTFIACGHLYEALL 748
Query: 325 QCTHLKKLDLRDNMFGVEAGV-ALSEVLPAFPDLT--EVYLSYXXXXXXXXXXXXXXXXX 381
HL LDL N F + GV L E L P+ T E++L
Sbjct: 749 SNEHLSLLDLGSN-FLEDTGVNLLCEALKD-PNCTLKELWLP-GCYLTSECCEEISAVLT 805
Query: 382 CAPSLEVLDLAGNDI 396
C +L+ L L N+I
Sbjct: 806 CNTNLKTLKLGNNNI 820
Score = 95 (38.5 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 203 EVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNN-LEELHLMNDGISEEAAQ 261
E + +++L S++++L+L N L KGV + +LK + LE L L ++ A
Sbjct: 682 EACGIIAASLINSEVKHLSLVENPLKNKGVMSLCEMLKDPSCVLESLMLSYCCLTFIACG 741
Query: 262 AILELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKH-SPALEDFRCSSTRIGAEGGIALA 320
+ E + S E L +L +N D G + E +K + L++ + +E ++
Sbjct: 742 HLYEALLSNEHLSLLDLGSNFLEDTGVNLLCEALKDPNCTLKELWLPGCYLTSECCEEIS 801
Query: 321 KALGQCTHLKKLDLRDNMFGVEAGVA-LSEVL 351
L T+LK L L +N + GV L E L
Sbjct: 802 AVLTCNTNLKTLKLGNNNIQ-DTGVKRLCEAL 832
Score = 65 (27.9 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
L L L N +QD G + ++L + ++ + L LA V LK
Sbjct: 810 LKTLKLGNNNIQDTGVKRLCEALCHPNCEMQCLGLDMCDFTSDCCEDLALVLTTCNTLKS 869
Query: 474 LNINGNFIPDEGIDEVKEILKH---SLDVLGPLDEN 506
LN++ N G++ + + L H +L+VLG LD++
Sbjct: 870 LNLDWNAFDHSGLEMLCKALNHKACNLEVLG-LDKS 904
Score = 50 (22.7 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 143 LLLGPLTEPGNSYTRICFSNKSFGLGASRVAAPILRLIKDQLTEVDLSDFIAGRPEEEAL 202
LL G TE NS CF + + V I+R IK L++ + ++ + P+
Sbjct: 489 LLFGMATEQVNSLLEPCFGC----ISSKEVRQEIIRYIKS-LSQQECNEKLVVHPQ---- 539
Query: 203 EVINMFSSALEGSQLRYL 220
N+F L+ + R++
Sbjct: 540 ---NLFFCILDNQEERFV 554
>UNIPROTKB|E2R142 [details] [associations]
symbol:CIITA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR008095 PRINTS:PR01719 GO:GO:0005524
GO:GO:0006355 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00660000095240 EMBL:AAEX03004543
Ensembl:ENSCAFT00000030075 Uniprot:E2R142
Length = 1128
Score = 124 (48.7 bits), Expect = 0.00048, P = 0.00048
Identities = 41/159 (25%), Positives = 73/159 (45%)
Query: 175 PILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRA 234
P +R +K E L + + ++++ FSS L+ L +LS N +G++GV
Sbjct: 950 PAVRDLKK--LEFALGSVFGPQAFPKLVKILEAFSS-LQHLDLD--SLSENKIGDEGVEQ 1004
Query: 235 FGALLKSQNNLEELHLMNDGISEEAAQAILELIPS-TEKLKVLHFHNNMTGDEGAVAISE 293
A LE L+L + I++ A + E +PS L L +NN D GA ++++
Sbjct: 1005 LSATFPRLKALETLNLSQNSITDVGACKLAEALPSLAPSLLRLSLYNNYICDVGAESLAQ 1064
Query: 294 IVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
++ +L + G LA +L +C H++ L
Sbjct: 1065 VLPDMVSLRVLDVQYNKFTGAGAQQLAASLRKCPHVETL 1103
>UNIPROTKB|F1PJN5 [details] [associations]
symbol:CIITA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046677 "response to antibiotic"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045345
"positive regulation of MHC class I biosynthetic process"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0034341 "response to interferon-gamma"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 GO:GO:0005524 GO:GO:0045944
GO:GO:0046677 GO:GO:0000122 GO:GO:0044212 GO:GO:0034341
InterPro:IPR007111 PROSITE:PS50837 OMA:PQAFPKL GO:GO:0045345
GeneTree:ENSGT00660000095240 EMBL:AAEX03004543
Ensembl:ENSCAFT00000030069 Uniprot:F1PJN5
Length = 1128
Score = 124 (48.7 bits), Expect = 0.00048, P = 0.00048
Identities = 41/159 (25%), Positives = 73/159 (45%)
Query: 175 PILRLIKDQLTEVDLSDFIAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRA 234
P +R +K E L + + ++++ FSS L+ L +LS N +G++GV
Sbjct: 950 PAVRDLKK--LEFALGSVFGPQAFPKLVKILEAFSS-LQHLDLD--SLSENKIGDEGVEQ 1004
Query: 235 FGALLKSQNNLEELHLMNDGISEEAAQAILELIPS-TEKLKVLHFHNNMTGDEGAVAISE 293
A LE L+L + I++ A + E +PS L L +NN D GA ++++
Sbjct: 1005 LSATFPRLKALETLNLSQNSITDVGACKLAEALPSLAPSLLRLSLYNNYICDVGAESLAQ 1064
Query: 294 IVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKL 332
++ +L + G LA +L +C H++ L
Sbjct: 1065 VLPDMVSLRVLDVQYNKFTGAGAQQLAASLRKCPHVETL 1103
>UNIPROTKB|F1PS71 [details] [associations]
symbol:NLRP13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104427
EMBL:AAEX03000720 Ensembl:ENSCAFT00000003975 Uniprot:F1PS71
Length = 1063
Score = 118 (46.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
LT LNL N+L+DEG + K+L L +DLS S G + LA + +K+
Sbjct: 876 LTHLNLRRNKLRDEGVKFLCKALSHPDCSLQNLDLSDCSFTADGCQELANALRHNHNMKI 935
Query: 474 LNINGNFIPDEGIDEVKEILKH---SLDVLG 501
L+I N + D G+ + E+L+ L+ LG
Sbjct: 936 LDIRNNDVQDNGVKHLCEVLQDPYCELNTLG 966
Score = 53 (23.7 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 217 LRYLNLSHNALGEK-GVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKV 275
L +LNLS N LG F L S NL+ L L + G++ + + + +
Sbjct: 707 LTHLNLSSNNLGVPVSTMIFKTLRHSACNLQYLWLESCGLTPLVCRHLFVELSRNSSVSF 766
Query: 276 LHF-HNNMTGDEG 287
L N+++G +G
Sbjct: 767 LSLGDNDLSGMKG 779
>ZFIN|ZDB-GENE-080206-1 [details] [associations]
symbol:zgc:174180 "zgc:174180" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003877 Pfam:PF00622
ZFIN:ZDB-GENE-080206-1 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR007111
PROSITE:PS50837 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101971
EMBL:BX548011 IPI:IPI00759004 RefSeq:NP_001104724.2
UniGene:Dr.114793 Ensembl:ENSDART00000134436 GeneID:100008100
KEGG:dre:100008100 NextBio:20787741 Bgee:F6NU75 Uniprot:F6NU75
Length = 1069
Score = 93 (37.8 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPG-LK 472
L +L+L+ N+LQD G L+ L+ H +L + LS + G L+ + P L+
Sbjct: 786 LRELDLSNNDLQDSGVKLLSDGLKSQHCKLDTLRLSGCMVTEEGCGFLSSALTSNPSHLR 845
Query: 473 MLNINGNFIPDEGIDEVKEILK---HSLDVLGPLD 504
L+++ N D G+ + E L+ ++LD L LD
Sbjct: 846 ELDLSYNHPGDSGVKLLSEQLEDPNYTLDKLN-LD 879
Score = 79 (32.9 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 44/150 (29%), Positives = 69/150 (46%)
Query: 203 EVINMFSSALEG--SQLRYLNLSHNALGEKGVRAFGALLKS-QNNLEELHLMNDGISEEA 259
E+I LEG S R +NL + L E + LLK Q++L L + +S
Sbjct: 662 EIIAYIKQKLEGNLSPERSINLFY-CLNELNDQT---LLKEIQSHLSSGSLSSARLSPAQ 717
Query: 260 AQAIL-ELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSP-ALEDFRCSSTRIGAEGGI 317
A++ L+ S E+L+ DE + +S ++K S AL F C+ T E +
Sbjct: 718 WSALVFVLLTSEEELEEFELQKFQRSDECLIRLSAVIKSSKRALLQF-CNLTVQSCES-L 775
Query: 318 ALAKALGQCTHLKKLDLRDNMFGVEAGVAL 347
+ A C L++LDL +N ++GV L
Sbjct: 776 SSALQSPNCV-LRELDLSNNDLQ-DSGVKL 803
>RGD|1307446 [details] [associations]
symbol:Nlrp5 "NLR family, pyrin domain containing 5"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005938 "cell cortex"
evidence=ISO] [GO:0007566 "embryo implantation" evidence=IEA;ISO]
[GO:0009566 "fertilization" evidence=IEA;ISO] [GO:0009887 "organ
morphogenesis" evidence=IEA;ISO] [GO:0031647 "regulation of protein
stability" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IEA;ISO] [GO:0043487 "regulation of RNA stability"
evidence=IEA;ISO] [GO:0043623 "cellular protein complex assembly"
evidence=IEA;ISO] [GO:0045179 "apical cortex" evidence=IEA;ISO]
RGD:1307446 GO:GO:0005829 GO:GO:0005739 GO:GO:0043234 GO:GO:0005730
GO:GO:0001701 GO:GO:0009566 GO:GO:0009887 GO:GO:0045179
GO:GO:0031647 GO:GO:0043623 GO:GO:0007566 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0043487 GeneTree:ENSGT00700000104427
CTD:126206 OrthoDB:EOG44XJG0 EMBL:CH474102 IPI:IPI00870859
RefSeq:NP_001100944.1 UniGene:Rn.198491 Ensembl:ENSRNOT00000041542
GeneID:308325 KEGG:rno:308325 UCSC:RGD:1307446 NextBio:658595
Uniprot:D3ZDM5
Length = 880
Score = 113 (44.8 bits), Expect = 0.00056, Sum P(2) = 0.00055
Identities = 38/137 (27%), Positives = 63/137 (45%)
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILELIPSTEKLKV 275
L+ L+L H+ L E ++ L++ + +++ L N + Q + L+ S LK
Sbjct: 520 LKTLDLGHSILNEWSMKILCLKLRNSSCSIQNLTFKNSEVVS-GLQYLWMLLVSNRNLKY 578
Query: 276 LHFHNNMTGDEGAVAISEIVKH-SPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDL 334
L+ N D+ E +KH S +LE R S + G ++K L + LK L L
Sbjct: 579 LNLGNTPMKDDDIKLACEALKHPSCSLETLRLDSCELTLTGYELISKLLLSASSLKCLSL 638
Query: 335 RDNMFGVEAGVALSEVL 351
N GV++ +L E L
Sbjct: 639 ARNKVGVKSMTSLGEAL 655
Score = 56 (24.8 bits), Expect = 0.00056, Sum P(2) = 0.00055
Identities = 20/83 (24%), Positives = 40/83 (48%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
LT L+L N + + L+ ++L+E L +++L + LA + L+
Sbjct: 690 LTHLSLTMNPVGNSAMKLLCEALKEPTCYLQDLELVDCQLTENCCEDLACMITTTKHLQS 749
Query: 474 LNINGNFIPDEGIDEVKEILKHS 496
L++ N + D+G+ + + LK S
Sbjct: 750 LDLGNNALGDKGVITLCKGLKQS 772
>UNIPROTKB|K7GQ78 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] EMBL:CU928276
Ensembl:ENSSSCT00000033324 GeneTree:ENSGT00660000095240
Gene3D:1.10.533.10 InterPro:IPR001315 InterPro:IPR011029
InterPro:IPR007111 Pfam:PF00619 SUPFAM:SSF47986 PROSITE:PS50209
PROSITE:PS50837 Uniprot:K7GQ78
Length = 845
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 36/141 (25%), Positives = 65/141 (46%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
L+L +N L + GVR L + L + L + I++ + + E + + + L +
Sbjct: 708 LDLDNNNLNDYGVRE---LQPCFSRLTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLY 764
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
NN D GA ++ I+ L+ + +I +EGG LA+A+ + ++ + N
Sbjct: 765 NNQITDVGARYVARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQI 824
Query: 340 GVEAGVALSEVLPAFPDLTEV 360
G E A +E L P LT +
Sbjct: 825 GDEGAKAFAEALRNHPSLTNL 845
>UNIPROTKB|F1SII2 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0050830 "defense
response to Gram-positive bacterium" evidence=IEA] [GO:0050700
"CARD domain binding" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042228 "interleukin-8 biosynthetic process" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0016045 "detection of bacterium"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IEA]
InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209 GO:GO:0005737
GO:GO:0016045 GO:GO:0006917 GO:GO:0050830 GO:GO:0035556
GO:GO:0043123 GO:GO:0070374 GO:GO:0046330 GO:GO:0016323
GO:GO:0032755 GO:GO:0006919 GO:GO:0051092 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0032760 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0002606 OMA:NDYGVRE GO:GO:0042228
GeneTree:ENSGT00660000095240 EMBL:CU928276
Ensembl:ENSSSCT00000018159 Uniprot:F1SII2
Length = 846
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 36/141 (25%), Positives = 65/141 (46%)
Query: 220 LNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFH 279
L+L +N L + GVR L + L + L + I++ + + E + + + L +
Sbjct: 708 LDLDNNNLNDYGVRE---LQPCFSRLTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLY 764
Query: 280 NNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMF 339
NN D GA ++ I+ L+ + +I +EGG LA+A+ + ++ + N
Sbjct: 765 NNQITDVGARYVARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQI 824
Query: 340 GVEAGVALSEVLPAFPDLTEV 360
G E A +E L P LT +
Sbjct: 825 GDEGAKAFAEALRNHPSLTNL 845
>UNIPROTKB|F1MT67 [details] [associations]
symbol:NLRP5 "NACHT, LRR and PYD domains-containing protein
5" species:9913 "Bos taurus" [GO:0045179 "apical cortex"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0043487 "regulation of RNA stability"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007566 "embryo implantation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 GO:GO:0043234 GO:GO:0005730 GO:GO:0001701
GO:GO:0009566 GO:GO:0009887 GO:GO:0045179 GO:GO:0031647
GO:GO:0017111 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
GO:GO:0043623 GO:GO:0007566 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0043487 GeneTree:ENSGT00700000104427 IPI:IPI00685152
UniGene:Bt.36110 OMA:SQAMEQE EMBL:DAAA02047829 EMBL:DAAA02047828
ProteinModelPortal:F1MT67 Ensembl:ENSBTAT00000017623 Uniprot:F1MT67
Length = 1098
Score = 123 (48.4 bits), Expect = 0.00060, P = 0.00060
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 211 ALEGSQ-LRYLNLSHNALGEKGVRAF-GALLKSQNNLEELHLMNDGISEEAAQAILELIP 268
AL G++ L +L+LS N L + G+ +++ L +L L+N ++ +++ +I
Sbjct: 902 ALMGNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNVIT 961
Query: 269 STEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTH 328
+ +L+ L N GDEG A+ E +K L + + +EG AL+ AL H
Sbjct: 962 RSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSRH 1021
Query: 329 LKKLDLRDNMFG 340
L L+L N G
Sbjct: 1022 LASLNLMRNDLG 1033
>UNIPROTKB|Q647I9 [details] [associations]
symbol:NLRP5 "NACHT, LRR and PYD domains-containing protein
5" species:9913 "Bos taurus" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005730 GO:GO:0017111
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 HOGENOM:HOG000294064 HOVERGEN:HBG063656 HSSP:P10775
EMBL:AY721594 IPI:IPI00685152 RefSeq:NP_001007815.1
UniGene:Bt.36110 ProteinModelPortal:Q647I9 STRING:Q647I9
PRIDE:Q647I9 GeneID:493717 KEGG:bta:493717 CTD:126206
eggNOG:NOG147585 InParanoid:Q647I9 OrthoDB:EOG44XJG0
NextBio:20865463 Uniprot:Q647I9
Length = 1098
Score = 123 (48.4 bits), Expect = 0.00060, P = 0.00060
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 211 ALEGSQ-LRYLNLSHNALGEKGVRAF-GALLKSQNNLEELHLMNDGISEEAAQAILELIP 268
AL G++ L +L+LS N L + G+ +++ L +L L+N ++ +++ +I
Sbjct: 902 ALMGNRHLTHLSLSMNPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNVIT 961
Query: 269 STEKLKVLHFHNNMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTH 328
+ +L+ L N GDEG A+ E +K L + + +EG AL+ AL H
Sbjct: 962 RSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSRH 1021
Query: 329 LKKLDLRDNMFG 340
L L+L N G
Sbjct: 1022 LASLNLMRNDLG 1033
>RGD|1588619 [details] [associations]
symbol:Nlrp4f "NLR family, pyrin domain containing 4F"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] RGD:1588619 GO:GO:0005524 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837 IPI:IPI00765970
Ensembl:ENSRNOT00000050492 UCSC:RGD:1588619 Uniprot:D4A8A2
Length = 908
Score = 122 (48.0 bits), Expect = 0.00061, P = 0.00061
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 217 LRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVL 276
L +L++S N L +KG++ L + ++L + I+ Q + E++ + + LK L
Sbjct: 780 LNHLDISCNDLKDKGIKILCKALTLPDCF--MNLKHCQITTRGCQDLAEVLRNNQNLKHL 837
Query: 277 HFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLR 335
H NN D G + + +KH L D + I L+ A QC LK+L L+
Sbjct: 838 HVSNNKLKDAGVKLLCDAIKHPNCHLVDLGLEACEITGASSENLSFAFIQCKTLKRLTLK 897
Query: 336 DNMFGVEAGV 345
N F + V
Sbjct: 898 GNAFEISGMV 907
>UNIPROTKB|F1RMK8 [details] [associations]
symbol:LOC100622751 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GeneTree:ENSGT00700000104427 OMA:QEVWLLI
EMBL:FP102565 Ensembl:ENSSSCT00000003680 Uniprot:F1RMK8
Length = 1178
Score = 123 (48.4 bits), Expect = 0.00065, P = 0.00065
Identities = 69/305 (22%), Positives = 130/305 (42%)
Query: 193 IAGRPEEEALEVINMFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQNNLEELHLMN 252
+ G P++E E +S A G Q++ L+ L ++L + NL+ L L
Sbjct: 721 VRGIPKDEGAEA---WSRAPHGLQIKTLDEHWEDLC--------SVLSTHPNLQHLDLSG 769
Query: 253 DGISEEAAQAI-LELIPSTEKLKVLHFHN-NMTGDEGAVAISEIVKHSPALEDFRCSSTR 310
+SE+A + + ++L T K+K L F + +T + ++ ++ D STR
Sbjct: 770 SILSEQAMKTLCIKLRQPTCKIKNLIFKSAQVTPGLRHLWVTLVINRKIKYLDLE--STR 827
Query: 311 IGAEGGIALAKALGQCTHLKKLDLRDNMFGV--EAGVALSEVLPAFPDLTEVYLSYXXXX 368
+ E + +A+ + + LR + G+ + +ALS+VL L + L+
Sbjct: 828 LKEEDVVMACEAIKH-PNCQLESLRLDRCGLTHSSCLALSQVLVTSVSLKSLSLAGNKVT 886
Query: 369 XXXXXXXXXXXXXCAPSLEVLDLAGNDITXXXXXXXXXXXXXXQFLTKLNLAENELQDEG 428
+L+ L L +T Q LT L LA N L EG
Sbjct: 887 DPSIKPLCDALRSTQCTLQKLILGDCGLTAADSQDLASALTKNQSLTHLYLASNSLGSEG 946
Query: 429 AILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKMLNINGNFIPDEGIDE 488
L+G++++ + L + L+ ++ AG LA + L L+++ N + D+G+
Sbjct: 947 VNLLGRAMKLPNCSLQRLILNACNLDVAGCGFLAFALMGNRRLTHLSLSVNPLEDDGMKL 1006
Query: 489 VKEIL 493
+ E++
Sbjct: 1007 LCEVM 1011
>RGD|1308314 [details] [associations]
symbol:Nlrp3 "NLR family, pyrin domain containing 3"
species:10116 "Rattus norvegicus" [GO:0002674 "negative regulation
of acute inflammatory response" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0006954 "inflammatory response"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA;ISO] [GO:0032621 "interleukin-18 production"
evidence=IEA;ISO] [GO:0042347 "negative regulation of NF-kappaB
import into nucleus" evidence=IEA;ISO] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0050701 "interleukin-1
secretion" evidence=IEA;ISO] [GO:0050713 "negative regulation of
interleukin-1 beta secretion" evidence=ISO] [GO:0050718 "positive
regulation of interleukin-1 beta secretion" evidence=IEA;ISO]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA;ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=ISO] [GO:0072559 "NLRP3
inflammasome complex" evidence=IEA;ISO] InterPro:IPR001611
PROSITE:PS51450 RGD:1308314 GO:GO:0005524 GO:GO:0050728
GO:GO:0006954 GO:GO:0051607 GO:GO:0006919 GO:GO:0032088
GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0042347
GeneTree:ENSGT00700000104141 OrthoDB:EOG4HX508 GO:GO:0050701
GO:GO:0032621 InterPro:IPR003590 SMART:SM00368 OMA:VNCCLTS
IPI:IPI00198971 Ensembl:ENSRNOT00000004280 UCSC:RGD:1308314
ArrayExpress:D4A523 Uniprot:D4A523
Length = 1033
Score = 103 (41.3 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 39/141 (27%), Positives = 64/141 (45%)
Query: 207 MFSSALEGSQLRYLNLSHNALGEKGVRAFGALLKSQN-NLEELHLMNDGISEEAAQAILE 265
+FSS L L+LS N LG+ G+R L+ N++ L L G++ + I
Sbjct: 730 LFSSLSTNQSLTELDLSDNTLGDPGMRVLCEALQHPGCNIQRLWLGRCGLTHQCCFNISS 789
Query: 266 LIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKALG 324
++ S++KL L +N GD G + +KH L+ S + + LA L
Sbjct: 790 VLSSSQKLVELDLSDNALGDFGVRLLCVGLKHLLCNLQKLWLVSCCLTSACCQDLALVLS 849
Query: 325 QCTHLKKLDLRDNMFGVEAGV 345
L +L + +N G ++GV
Sbjct: 850 SNHSLTRLYIGENALG-DSGV 869
Score = 67 (28.6 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 414 LTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGLKM 473
LT+L + EN L D G ++ + +++ L ++ L + + L V L
Sbjct: 854 LTRLYIGENALGDSGVQVLCEKMKDPQCNLQKLGLVNSGLTSLCCSALTSVLKTNQNLTH 913
Query: 474 LNINGNFIPDEGIDEVKEILKH 495
L + N + D G+ + E L H
Sbjct: 914 LYLRSNALGDMGLKLLCEGLLH 935
>UNIPROTKB|E2RJ74 [details] [associations]
symbol:NLRP14 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524 GO:GO:0007283
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GeneTree:ENSGT00700000104427 InterPro:IPR003590
SMART:SM00368 EMBL:AAEX03012879 EMBL:AAEX03012880
Ensembl:ENSCAFT00000010803 OMA:KSPECKL Uniprot:E2RJ74
Length = 1094
Score = 114 (45.2 bits), Expect = 0.00072, Sum P(2) = 0.00071
Identities = 40/138 (28%), Positives = 68/138 (49%)
Query: 205 INMFSSALEGSQLRYLNLSHNALGEKGVRAF-GALLKSQNNLEELHLMNDGISEEAAQAI 263
+N+ + + LR+LNLS N L + GV+ AL + +LE L L + G++ + +
Sbjct: 778 LNISKALIRSQSLRFLNLSTNHLLDDGVKLLCEALGHPKCHLERLSLESCGLTVAGCEDL 837
Query: 264 LELIPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDF---RCSSTRIGAEGGIAL 319
+ S ++L L +N+ GD+G +++ +KH L+ RC T + +E L
Sbjct: 838 SLALISNKRLTHLCLADNILGDDGVKLVNDALKHPQCKLQSLVLRRCHFTSLSSEH---L 894
Query: 320 AKALGQCTHLKKLDLRDN 337
+ AL L LDL N
Sbjct: 895 SSALLCNKSLIHLDLGSN 912
Score = 56 (24.8 bits), Expect = 0.00072, Sum P(2) = 0.00071
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 412 QFLTKLNLAENELQDEGAILIGKSLEEGHGQLIEIDLSTNSMKRAGARLLAQVAVNKPGL 471
Q L K+NL +N L EG + + + L+ +L + + + +LL V ++ P L
Sbjct: 1016 QNLIKINLKQNTLGYEGMMKLCEVLKSPECKLKVLGVCKEAFDEEAQKLLEAVRISNPHL 1075
>UNIPROTKB|F1NYZ9 [details] [associations]
symbol:F1NYZ9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0043549 "regulation of kinase activity"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0045345 "positive regulation of MHC class I biosynthetic
process" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0060335
"positive regulation of interferon-gamma-mediated signaling
pathway" evidence=IEA] [GO:0060339 "negative regulation of type I
interferon-mediated signaling pathway" evidence=IEA] [GO:0060340
"positive regulation of type I interferon-mediated signaling
pathway" evidence=IEA] GO:GO:0005829 GO:GO:0005634 GO:GO:0045944
GO:GO:0045087 GO:GO:0032088 GO:GO:0000979 GO:GO:0043549
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0045345 GO:GO:0060339
GO:GO:0060340 GO:GO:0060335 OMA:EILLSWN
GeneTree:ENSGT00660000095240 EMBL:AADN02065764 IPI:IPI00597693
Ensembl:ENSGALT00000001908 Uniprot:F1NYZ9
Length = 1698
Score = 124 (48.7 bits), Expect = 0.00076, P = 0.00076
Identities = 35/132 (26%), Positives = 60/132 (45%)
Query: 221 NLSHNALGEKGVRAFGALLKSQNNLEELHLMNDGISEEAAQAILELIPSTEKLKVLHFHN 280
+L H LG+ + L +L+ L L ++ I ++ + E + S ++ ++ +
Sbjct: 1567 SLGHMKLGDAAIPKLVFGLCEMPSLKRLILNHNSIGDDGCSRLAEALSSMHCMEEINLGH 1626
Query: 281 NMTGDEGAVAISEIVKHSPALEDFRCSSTRIGAEGGIALAKALGQCTHLKKLDLRDNMFG 340
N GD G + I+ ++ L+ S GG L +AL C HL++L L N FG
Sbjct: 1627 NKIGDLGLINIAAVLLEMQNLKRIDLSGNCPSPAGGEKLMEALANCKHLEELILSRNDFG 1686
Query: 341 VEAGVALSEVLP 352
V L+ LP
Sbjct: 1687 DGTAVKLALCLP 1698
>UNIPROTKB|B0FPE9 [details] [associations]
symbol:NLRP3 "NACHT, LRR and PYD domains-containing protein
3" species:9544 "Macaca mulatta" [GO:0072559 "NLRP3 inflammasome
complex" evidence=ISS] GO:GO:0005524 GO:GO:0005737 GO:GO:0050728
GO:GO:0006954 GO:GO:0051607 GO:GO:0006919 GO:GO:0032088
GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
GO:GO:0072559 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0042347
eggNOG:NOG82860 HOGENOM:HOG000294064 CTD:114548 KO:K12800
OrthoDB:EOG4HX508 GO:GO:0050701 GO:GO:0032621 InterPro:IPR003590
SMART:SM00368 EMBL:EU344966 RefSeq:NP_001107823.1 UniGene:Mmu.12334
ProteinModelPortal:B0FPE9 STRING:B0FPE9 GeneID:701278
KEGG:mcc:701278 NextBio:19980797 Uniprot:B0FPE9
Length = 1035
Score = 121 (47.7 bits), Expect = 0.00091, P = 0.00091
Identities = 42/147 (28%), Positives = 70/147 (47%)
Query: 209 SSALEGSQ-LRYLNLSHNALGEKGVRAFGALLKS-QNNLEELHLMNDGISEEAAQAILEL 266
+S L S+ L L + NALG+ GV K+ Q NL++L L+N G++ A+ +
Sbjct: 847 ASVLSTSRSLTRLYVGENALGDAGVAILCEKAKNPQCNLQKLGLVNSGLTSACCSALSSV 906
Query: 267 IPSTEKLKVLHFHNNMTGDEGAVAISEIVKHSPA-LEDFRCSSTRIGAEGGIALAKALGQ 325
+ + + L L+ N GD+G + E + H L+ + + + L+ L
Sbjct: 907 LSTNQNLTHLYLRGNTLGDKGIKLLCEGLLHPDCKLQVLELDNCNLTSHCCWDLSTLLTS 966
Query: 326 CTHLKKLDLRDNMFGVEAGVAL-SEVL 351
L+KL L +N G + GV + EVL
Sbjct: 967 SQSLRKLSLGNNDLG-DLGVMMFCEVL 992
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.363 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 541 480 0.00079 119 3 11 23 0.45 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 119
No. of states in DFA: 602 (64 KB)
Total size of DFA: 228 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.23u 0.10s 40.33t Elapsed: 00:00:02
Total cpu time: 40.27u 0.10s 40.37t Elapsed: 00:00:02
Start: Tue May 21 06:20:39 2013 End: Tue May 21 06:20:41 2013
WARNINGS ISSUED: 1