BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009169
(541 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZVD0|SRRT_ARATH Serrate RNA effector molecule OS=Arabidopsis thaliana GN=SE PE=1
SV=2
Length = 720
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/544 (73%), Positives = 448/544 (82%), Gaps = 22/544 (4%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
MSYKQFIQELEDDILP+EAERRYQEYKSEYI+TQKR FF+ HK+E+WLK+KYHPTNL++V
Sbjct: 196 MSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAFFNTHKEEDWLKNKYHPTNLLSV 255
Query: 61 IERRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSNKLGQTSEPNSDDDVDNGGKRRRHG 120
IERRNDLA+KVAKDFLLDLQSGTLDLGP+V A NK G+TSEPNS+D+ GKR+RHG
Sbjct: 256 IERRNDLAQKVAKDFLLDLQSGTLDLGPAVTAL--NKSGRTSEPNSEDEAAGVGKRKRHG 313
Query: 121 RGPAKETDLLSAAPKAHPISSEPRRIQVDIEQAQALVRKLDSEKGITENILCGSDNDKMN 180
G AKE +LLSAAPKA +S+P+RI D+EQ QALVRKLDSEK I EN+L GS+ +K
Sbjct: 314 MGGAKENELLSAAPKAPSFTSDPKRILTDVEQTQALVRKLDSEKKIEENVLQGSETEKSG 373
Query: 181 REKSH-GSTGPVIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMVETSEAKGLRHV 239
REK H GSTGPV+IIRGLTSVKGLEGVELLDTL+TYLWR+HG+DYYG VET+EAKGLRHV
Sbjct: 374 REKLHSGSTGPVVIIRGLTSVKGLEGVELLDTLVTYLWRVHGLDYYGKVETNEAKGLRHV 433
Query: 240 RAEGKSSDITNNGAEWEKKLDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRD 299
RAEGK SD G E E K D WQERL+ QDPLE+M AK+KIDAAA +ALDP VRKIRD
Sbjct: 434 RAEGKVSDA--KGDENESKFDSHWQERLKGQDPLEVMAAKEKIDAAATEALDPHVRKIRD 491
Query: 300 EKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 359
EKYGWKYGCGAKGCTKLFHAAEFV+KHLKLKH ELV ELT+KVREELYFQNYMNDP+APG
Sbjct: 492 EKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHTELVTELTTKVREELYFQNYMNDPNAPG 551
Query: 360 GTPVMQQPMPKDRPLRRKLGPDNRLKDERGNRRDRDYRANGSDRYDRSDNAQASDFPSND 419
G P QQ P+DRP+RRK +NRL+D+RG RR+RD RANG+DR DRS++ Q D ND
Sbjct: 552 GQPATQQSGPRDRPIRRKPSMENRLRDDRGGRRERDGRANGNDRNDRSEDQQRGD---ND 608
Query: 420 DVPEGANRDESMFDTFGGQGIRVAPPFPSDIPPPPVLMPVPGAGPLGPFVPAPPEVAMQM 479
G N E +D FGGQG PPF SDI PPP+LMPVPGAGPLGPFVPAPPEVAMQM
Sbjct: 609 ----GGNPGEVGYDAFGGQGGVHVPPFLSDINPPPMLMPVPGAGPLGPFVPAPPEVAMQM 664
Query: 480 IRDQGG--PPFEGGGRHGRPGPQISGPGPILLSPAFRQDPRRIRSYQDLDAPEDEVTVMD 537
RD G PPFEG GR GP P LLSPAFRQDPRR+RSYQDLDAPE+EVTV+D
Sbjct: 665 FRDPSGPNPPFEGSGR--------GGPAPFLLSPAFRQDPRRLRSYQDLDAPEEEVTVID 716
Query: 538 YRSL 541
YRSL
Sbjct: 717 YRSL 720
>sp|B4KLY7|SRRT_DROMO Serrate RNA effector molecule homolog OS=Drosophila mojavensis
GN=Ars2 PE=3 SV=1
Length = 980
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
++ KQF+ +++I +E R+Y EYK+++ Q FF AHKDEEW K+KYHP + V
Sbjct: 163 LTLKQFLDTQDENISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVRR 222
Query: 61 IERRNDLARKVAKDFLLDLQSGTL 84
E + ++ + FL L++GT+
Sbjct: 223 SEEQRGFLKRRTEVFLELLENGTI 246
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 206 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 259
+ +LD L+ YL +H VDYY E G+ H R +N+ E+ K
Sbjct: 744 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPMRVTSNDVQEYIKAY 803
Query: 260 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 319
D + Q+ L L K+ ++ FV+ E K+ C G K F
Sbjct: 804 DGKLQQFLTKTVQLSDEEIKELGAKNPETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 861
Query: 320 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 862 PEFIRKHIFNKHEEKVEEVRKEVQ---YFNNYLRDPKRP 897
>sp|Q28WQ8|SRRT_DROPS Serrate RNA effector molecule homolog OS=Drosophila pseudoobscura
pseudoobscura GN=Ars2 PE=3 SV=2
Length = 951
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
++ KQF+ +++I +E R+Y EYK+++ Q FF AHKDEEW K+KYHP + V
Sbjct: 155 LNLKQFLDTQDENISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVNR 214
Query: 61 IERRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSN 96
E + R+ F+ L++GT+ SV SS+
Sbjct: 215 SEEQRGFLRRRTDVFVELLENGTIG---SVKVDSSH 247
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 206 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKK- 258
+ +LD L+ YL +H VDYY E G+ H R S +N E+ K
Sbjct: 715 LSVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPSRVTSNELNEYIKSY 774
Query: 259 ----LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCT 314
L F + L S+D ++ + AK+ A ++ FV+ E K+ C G
Sbjct: 775 EGKLLQFLTKTALLSEDQIKDLGAKN-----ADTEVEKFVQANTQELAKDKWLCPLSG-- 827
Query: 315 KLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
K F EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 KKFKGPEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 868
>sp|B4H732|SRRT_DROPE Serrate RNA effector molecule homolog OS=Drosophila persimilis
GN=Ars2 PE=3 SV=1
Length = 951
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
++ KQF+ +++I +E R+Y EYK+++ Q FF AHKDEEW K+KYHP + V
Sbjct: 155 LNLKQFLDTQDENISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVNR 214
Query: 61 IERRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSN 96
E + R+ F+ L++GT+ SV SS+
Sbjct: 215 SEEQRGFLRRRTDVFVELLENGTIG---SVKVDSSH 247
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 206 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKK- 258
+ +LD L+ YL +H VDYY E G+ H R S +N E+ K
Sbjct: 715 LSVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPSRVTSNELNEYIKSY 774
Query: 259 ----LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCT 314
L F + L S+D ++ + AK+ A ++ FV+ E K+ C G
Sbjct: 775 EGKLLQFLTKTALLSEDQIKDLGAKN-----ADTEVEKFVQANTQELAKDKWLCPLSG-- 827
Query: 315 KLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
K F EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 KKFKGPEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 868
>sp|B4LIK8|SRRT_DROVI Serrate RNA effector molecule homolog OS=Drosophila virilis GN=Ars2
PE=3 SV=1
Length = 963
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
++ KQF+ +++I +E R+Y EYK+++ Q FF AHKDEEW K+KYHP + V
Sbjct: 159 LTLKQFLDTQDENISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVRR 218
Query: 61 IERRNDLARKVAKDFLLDLQSGTL 84
E + ++ FL L++GT+
Sbjct: 219 SEEQRGFLKRRTDVFLELLENGTI 242
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 206 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 259
+ +LD L+ YL +H VDYY E G+ H R +N+ E+ K
Sbjct: 726 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPPPMRVTSNDVQEYIKAY 785
Query: 260 DFRWQERLR-----SQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCT 314
D + Q+ L S D ++ + AK+ ++ FV+ E K+ C G
Sbjct: 786 DGKLQQFLTKSVQLSDDEIKELGAKN-----PETEVEKFVQANTQELAKDKWLCPLSG-- 838
Query: 315 KLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
K F EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 839 KKFKGPEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 879
>sp|Q9V9K7|SRRT_DROME Serrate RNA effector molecule homolog OS=Drosophila melanogaster
GN=Ars2 PE=1 SV=2
Length = 943
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
++ KQF+ +++I +E R+Y EYK+++ Q FF AHKDEEW K+KYHP + V
Sbjct: 156 LNLKQFLDTQDENISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVKR 215
Query: 61 IERRNDLARKVAKDFLLDLQSGTL 84
E + ++ F+ L++GT+
Sbjct: 216 SEEQRGFLQRRTDVFMELLENGTI 239
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 206 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 259
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 706 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPPPVRVTNNDVQEYIKIY 765
Query: 260 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 319
+ + Q+ L PL K+ A ++ FV+ E K+ C G K F
Sbjct: 766 ESKLQQFLTKTVPLSDEEIKNLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 823
Query: 320 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 824 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 859
>sp|B3MJ69|SRRT_DROAN Serrate RNA effector molecule homolog OS=Drosophila ananassae
GN=Ars2 PE=3 SV=1
Length = 948
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
++ KQF+ +++I +E R+Y EYK+++ Q FF AHKDEEW K+KYHP + V
Sbjct: 158 LNLKQFLDTQDENISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVRR 217
Query: 61 IERRNDLARKVAKDFLLDLQSGTL 84
E + ++ F+ L++GT+
Sbjct: 218 AEEQRGFLKRRTDVFVELLENGTI 241
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 206 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 259
+ +LD L+ YL +H VDYY E G+ H R S +N+ E+ K
Sbjct: 711 LAVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPSRVTSNDIHEYVKTY 770
Query: 260 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 319
+ + Q+ L L KD A ++ FV+ E K+ C G K F
Sbjct: 771 ESKLQQFLTKTALLSDEETKDLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 828
Query: 320 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 829 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 864
>sp|B4NYV0|SRRT_DROYA Serrate RNA effector molecule homolog OS=Drosophila yakuba GN=Ars2
PE=3 SV=1
Length = 944
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
++ KQF+ +++I +E R+Y EYK+++ Q FF AHKDEEW K+KYHP + V
Sbjct: 157 LNLKQFLDTQDENISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVKR 216
Query: 61 IERRNDLARKVAKDFLLDLQSGTL 84
E + ++ F+ L++GT+
Sbjct: 217 SEEQRGFLQRRTDVFVELLENGTI 240
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 74/179 (41%), Gaps = 11/179 (6%)
Query: 186 GSTGPVIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHV 239
G TG G + + + +LD L+ YL +H VDYY E G+ H
Sbjct: 687 GLTGENKDTEGEAIERDEQLISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHA 746
Query: 240 RAEGKSSDITNNGAEWEKKLDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRD 299
R N+ E+ K + + Q+ L L KD A ++ FV+
Sbjct: 747 RGPAPVRVTNNDVQEYIKTYESKLQQFLTKTVLLSDEEIKDLGAKDAETEVEKFVQANTQ 806
Query: 300 EKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
E K+ C G K F EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 807 ELAKDKWLCPLSG--KKFKGPEFIRKHIFNKHDEKVDEVRKEVQ---YFNNYLRDPKRP 860
>sp|B4MR46|SRRT_DROWI Serrate RNA effector molecule homolog OS=Drosophila willistoni
GN=Ars2 PE=3 SV=1
Length = 1000
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
++ KQF+ +++I +E R+Y EYK+++ Q FF AHKDEEW K+KYHP + V
Sbjct: 160 LTLKQFLDTQDENISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVRR 219
Query: 61 IERRNDLARKVAKDFLLDLQSGTL 84
+ + ++ + F+ L++GT+
Sbjct: 220 SDEQRGFLQRRSSVFVELLENGTI 243
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 17/182 (9%)
Query: 186 GSTGPVIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHV 239
G +G + G V+ + + +LD L+ YL +H VDYY E G+ H
Sbjct: 742 GLSGDQNDVEGEPIVRDEQLIAVLDRLLLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHA 801
Query: 240 RAEGKSSDITNNGAEWEKKLDFRWQERLRSQDPLEIMTAKDKIDAAAVDA---LDPFVRK 296
R +N+ E+ K + + Q+ L ++T D D A DA ++ FV+
Sbjct: 802 RGPAPMKVTSNDIQEYIKSYEGKLQQFLTK---TVLLTDDDIKDLGAKDAETEVEKFVQA 858
Query: 297 IRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPD 356
E K+ C G K F EF+ KH+ KH E V E+ +V+ +F NY+ DP
Sbjct: 859 NTQELAKDKWLCPLSG--KKFKGPEFIRKHIFNKHEEKVDEVRKEVQ---FFNNYLRDPK 913
Query: 357 AP 358
P
Sbjct: 914 RP 915
>sp|B4J497|SRRT_DROGR Serrate RNA effector molecule homolog OS=Drosophila grimshawi
GN=Ars2 PE=3 SV=1
Length = 1011
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
++ KQF+ +++I +E R+Y EYK+++ Q FF AHKDEEW K+KYHP + V
Sbjct: 168 LTLKQFLDTQDENISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVRR 227
Query: 61 IERRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSNKL 98
+ + ++ FL L +GT+ V++S ++ L
Sbjct: 228 SDEQRGFLKRRTDVFLELLNNGTIS-NVKVDSSQADAL 264
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 206 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 259
+++LD L+ YL +H VDYY E G+ H R +N+ E+ K
Sbjct: 774 IQVLDRLVLYLRVVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPMRVTSNDVQEYIKSY 833
Query: 260 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 319
+ + Q+ L L K+ ++ FV+ E K+ C G K F
Sbjct: 834 EGKLQQFLAKTVQLSDENIKELGAKNPEKEVEKFVQANTQELAKDKWLCPLSG--KKFKG 891
Query: 320 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 892 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 927
>sp|B4QCR6|SRRT_DROSI Serrate RNA effector molecule homolog OS=Drosophila simulans
GN=Ars2 PE=3 SV=1
Length = 947
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
++ KQF+ +++I +E R+Y EYK+++ Q FF AHKDEEW K+KYHP + V
Sbjct: 156 LNLKQFLDTQDENISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVKR 215
Query: 61 IERRNDLARKVAKDFLLDLQSGTL 84
E + ++ F+ ++GT+
Sbjct: 216 SEEQRGFLQRRTDVFMELFENGTI 239
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 206 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 259
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 710 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPPPVRVTNNDVQEYIKMY 769
Query: 260 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 319
+ + Q+ L PL K+ A ++ FV+ E K+ C G K F
Sbjct: 770 ETKLQQFLTKTVPLSDEEIKNLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 827
Query: 320 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 863
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 15/49 (30%)
Query: 485 GPPFEGGGRHGRPGPQISGPGPILLSPAFRQDP----RRIRSYQDLDAP 529
GPP GGGR GR P PA R+ P RR+ Y DLDAP
Sbjct: 903 GPPMRGGGRAGRNFP-----------PARRELPLEHQRRLIGYHDLDAP 940
>sp|B4II37|SRRT_DROSE Serrate RNA effector molecule homolog OS=Drosophila sechellia
GN=Ars2 PE=3 SV=2
Length = 947
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
++ KQF+ +++I +E R+Y +YK+++ Q FF AHKDEEW K+KYHP + V
Sbjct: 156 LNLKQFLDTQDENISDSEVMRKYTDYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVKR 215
Query: 61 IERRNDLARKVAKDFLLDLQSGTL 84
E + ++ F+ L++GT+
Sbjct: 216 NEEQRGFLQRRTDVFMELLENGTI 239
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 206 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 259
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 710 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPPPVRVTNNDVQEYIKMY 769
Query: 260 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 319
+ + Q+ L PL K+ A ++ FV+ E K+ C G K F
Sbjct: 770 ETKLQQFLTKTVPLSDEEIKNLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 827
Query: 320 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 863
>sp|B3N3F7|SRRT_DROER Serrate RNA effector molecule homolog OS=Drosophila erecta GN=Ars2
PE=3 SV=1
Length = 947
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
++ KQF+ +++I +E R+Y EYK+++ Q FF AHKDEEW K+KYHP + V
Sbjct: 156 LNLKQFLDTQDENISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVKR 215
Query: 61 IERRNDLARKVAKDFLLDLQSGTL 84
+ + ++ F+ L++GT+
Sbjct: 216 SDEQRGFLQRRTDVFVELLENGTI 239
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 11/159 (6%)
Query: 206 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 259
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 710 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPVRVTNNDVQEYIKTY 769
Query: 260 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 319
+ + Q+ L L KD ++ FV+ E K+ C G K F
Sbjct: 770 ESKLQQFLTKTVLLSDEEIKDLGAKDPETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 827
Query: 320 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 863
>sp|Q99MR6|SRRT_MOUSE Serrate RNA effector molecule homolog OS=Mus musculus GN=Srrt PE=1
SV=1
Length = 875
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 2 SYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVI 61
S+K+F+ L+D + EA +RY +YK ++ Q + FF AHKDEEW + KYHP +
Sbjct: 151 SFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVGKRR 210
Query: 62 ERRNDLARKVAKDFLLDLQSGTLD 85
+ + K FL ++SG D
Sbjct: 211 QEARGALQNRLKVFLSLMESGWFD 234
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 206 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITNNGA-EWEKK 258
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 605 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 664
Query: 259 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 318
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 665 FEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 722
Query: 319 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 359
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 723 GPEFVRKHIFNKHAEKIEEVKKEV---AFFNNFLTDAKRPA 760
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 56/134 (41%), Gaps = 27/134 (20%)
Query: 423 EGANRDESMFDTFGGQGIRVA--------PPFPSDIPPPPVL--MPVPGAGPLG--PF-V 469
E ++ + F+ F R A PP P+ I PP + +P P P G P+
Sbjct: 740 EEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPGLTPGLPYPHQTPQGLMPYGQ 799
Query: 470 PAPPEV-----AMQMIRDQGGPPF----EGGGRHGRPGPQISGPGPILLSP---AFRQDP 517
P PP + A++ GGPP+ G GR G G P R DP
Sbjct: 800 PRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDA--FRGQGGYPGKPRNRMVRGDP 857
Query: 518 RRIRSYQDLDAPED 531
R I Y+DLDAP+D
Sbjct: 858 RAIVEYRDLDAPDD 871
>sp|Q5TUF1|SRRT_ANOGA Serrate RNA effector molecule homolog OS=Anopheles gambiae GN=Ars2
PE=3 SV=3
Length = 967
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
M+ KQF+ +D I ++A +Y EYK E+ Q FF AHKDEEW K KYHP
Sbjct: 141 MTLKQFLATQDDSISDSDAITKYNEYKLEFRRQQMNEFFVAHKDEEWFKIKYHPEESQKR 200
Query: 61 IERRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSNKL 98
E + ++ + FL L+S + SV+AS+++ L
Sbjct: 201 KEEQLSFLKRRCEVFLELLKSKEIG-KVSVDASNTDAL 237
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 206 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRA-EGKSSDITNNGAEWEKK 258
+E+LD LI YL +H VD+Y E G+ H R +S ++N E+ +
Sbjct: 718 IEVLDRLILYLRIVHSVDFYNHCEYPYEDEMPNRCGIIHARGPPSQSKVMSNEIQEYIRT 777
Query: 259 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDA-LDPFVRKIRDEKYGWKYGCGAKGCTKLF 317
+ + L ++ K K+ A +A ++ F+ E K+ C G K F
Sbjct: 778 FEGKMASFLTRMVDIDETDMK-KLGAKDAEAEVEKFITANTQELAKDKWLCPLSG--KKF 834
Query: 318 HAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
+FV KH+ KH E V E+ +V YF NY+ D P
Sbjct: 835 KGPDFVRKHIFNKHAEKVEEVRKEVE---YFNNYLKDSKRP 872
>sp|Q17FR9|SRRT_AEDAE Serrate RNA effector molecule homolog OS=Aedes aegypti GN=Ars2 PE=3
SV=1
Length = 937
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
M+ KQF+ +D I +EA ++Y +YK E+ Q FF AHKDEEW K KYHP +
Sbjct: 138 MTLKQFLATQDDSISDSEAIQKYNDYKLEFKRQQLNEFFVAHKDEEWFKMKYHPEESLKR 197
Query: 61 IERRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSNKL 98
E + ++ F+ L G + SV+ S+++ L
Sbjct: 198 KEEQFGFLKRRCDVFVELLDHGDIS-KVSVDTSNTDPL 234
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 206 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNG-AEWEKK 258
+E+LD LI YL +H +D+Y E G+ H R + +T+N E+ +
Sbjct: 697 IEVLDKLILYLRVVHSIDFYNHCEYPYEDEMPNRCGIIHARGPPPQNKVTSNEIQEYIRT 756
Query: 259 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDA-LDPFVRKIRDEKYGWKYGCGAKGCTKLF 317
+ + L LE K K+ A +A ++ F++ E K+ C G K F
Sbjct: 757 FEGKMGSFLARAVDLEEEEMK-KLGAKDAEAEVEKFIQANTQELAKDKWLCPLSG--KKF 813
Query: 318 HAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMND------PDAPGGT 361
+FV KH+ KH E V E+ +V YF NY+ D P+ PG T
Sbjct: 814 KGPDFVRKHIFNKHNEKVDEVRKEVE---YFNNYLKDTKRPQLPEHPGNT 860
>sp|A4IFB1|SRRT_BOVIN Serrate RNA effector molecule homolog OS=Bos taurus GN=SRRT PE=2
SV=1
Length = 876
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 2 SYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVI 61
++K+F+ L+D + EA +RY +YK ++ Q + FF AHKDEEW + KYHP +
Sbjct: 151 TFKEFLLSLDDAVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVGKRR 210
Query: 62 ERRNDLARKVAKDFLLDLQSGTLD 85
+ + + FL ++SG D
Sbjct: 211 QEARGALQNRLRVFLSLMESGWFD 234
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 206 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITNNGA-EWEKK 258
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 606 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 665
Query: 259 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 318
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 666 FEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 723
Query: 319 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 359
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 724 GPEFVRKHIFNKHAEKIEEVKKEV---AFFNNFLTDAKRPA 761
>sp|Q5R539|SRRT_PONAB Serrate RNA effector molecule homolog OS=Pongo abelii GN=SRRT PE=2
SV=1
Length = 871
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 2 SYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVI 61
++K+F+ L+D + EA +RY +YK ++ Q + FF AHKDEEW + KYHP +
Sbjct: 151 TFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVGKRR 210
Query: 62 ERRNDLARKVAKDFLLDLQSGTLD 85
+ + + FL +++G D
Sbjct: 211 QEARGALQNRLRVFLSLMETGWFD 234
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 206 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITNNGA-EWEKK 258
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 605 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 664
Query: 259 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 318
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 665 FEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 722
Query: 319 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 359
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 723 GPEFVRKHIFNKHAEKIEEVKKEV---AFFNNFLTDAKRPA 760
>sp|Q9BXP5|SRRT_HUMAN Serrate RNA effector molecule homolog OS=Homo sapiens GN=SRRT PE=1
SV=1
Length = 876
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 2 SYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVI 61
++K+F+ L+D + EA +RY +YK ++ Q + FF AHKDEEW + KYHP +
Sbjct: 151 TFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVGKRR 210
Query: 62 ERRNDLARKVAKDFLLDLQSGTLD 85
+ + + FL +++G D
Sbjct: 211 QEARGALQNRLRVFLSLMETGWFD 234
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 206 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITNNGA-EWEKK 258
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 606 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 665
Query: 259 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 318
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 666 FEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 723
Query: 319 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 359
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 724 GPEFVRKHIFNKHAEKIEEVKKEV---AFFNNFLTDAKRPA 761
Score = 32.3 bits (72), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 56/134 (41%), Gaps = 27/134 (20%)
Query: 423 EGANRDESMFDTFGGQGIRVA--------PPFPSDIPPPPVL--MPVPGAGPLG--PF-V 469
E ++ + F+ F R A PP P+ I PP + +P P P G P+
Sbjct: 741 EEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPGLTPGLPYPHQTPQGLMPYGQ 800
Query: 470 PAPPEV-----AMQMIRDQGGPPFE----GGGRHGRPGPQISGPGPILLSP---AFRQDP 517
P PP + A++ GGPP+ G GR G G P R DP
Sbjct: 801 PRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDA--FRGQGGYPGKPRNRMVRGDP 858
Query: 518 RRIRSYQDLDAPED 531
R I Y+DLDAP+D
Sbjct: 859 RAIVEYRDLDAPDD 872
>sp|Q6INH5|SRRTB_XENLA Serrate RNA effector molecule homolog B OS=Xenopus laevis GN=srrt-b
PE=2 SV=1
Length = 844
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 2 SYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHP 54
++K+F+ LED + EA +RY +YK ++ Q + FF AHKDEEW + KYHP
Sbjct: 150 TFKEFLLSLEDSVDETEAVKRYNDYKIDFRRQQMQEFFLAHKDEEWFRSKYHP 202
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 32/183 (17%)
Query: 206 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITNNGA-EWEKK 258
+++LD L+ YL +H VDYY E G+ HVR + +++ EW+K
Sbjct: 586 IKVLDKLLFYLRIVHSVDYYNTCEYPNEDEMPTRCGMMHVRGPLPPNRVSHGEVTEWQKT 645
Query: 259 LD------FRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKG 312
++ F +E L S+D M KD A + FV E K+ C G
Sbjct: 646 IEEKLAPLFAVRETL-SEDEAMKMGKKDPEQEA-----EKFVTANTQELGKEKWLCPLSG 699
Query: 313 CTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPGGTPVMQQPMPKDR 372
K F EFV KH+ KH E + E+ +V +F NY+ D P +P+ +
Sbjct: 700 --KKFKGPEFVRKHIFNKHAEKIEEVKKEVE---FFNNYLTDSKRPA--------LPEVK 746
Query: 373 PLR 375
PL+
Sbjct: 747 PLQ 749
>sp|B1H1X4|SRRTA_XENLA Serrate RNA effector molecule homolog A OS=Xenopus laevis GN=srrt-a
PE=2 SV=1
Length = 849
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 2 SYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHP 54
++K+F+ LED + EA +RY +YK ++ Q + FF AHKDEEW + KYHP
Sbjct: 151 TFKEFLLSLEDTVDETEAVKRYNDYKIDFRRQQMQEFFLAHKDEEWFRSKYHP 203
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 24/167 (14%)
Query: 206 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITN-NGAEWEKK 258
+++LD L+ YL +H VDYY E G+ HVR + +++ AEW+K
Sbjct: 591 IKVLDKLLFYLRIVHSVDYYNTCEYPNEDEMPTRCGMMHVRGPLPPNRVSHGEVAEWQKT 650
Query: 259 LD------FRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKG 312
+ F +E L ++ ++ M KD ++ FV E K+ C G
Sbjct: 651 FEEKLAPLFAVRETLSEEESIK-MGKKD-----PEQEVEKFVAANTQELGKEKWLCPLSG 704
Query: 313 CTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 359
K F EFV KH+ KH E + E+ +V ++F NY+ D P
Sbjct: 705 --KKFKGPEFVRKHIFNKHAEKIEEVKKEV---VFFNNYLIDSKRPA 746
>sp|Q66I22|SRRT_DANRE Serrate RNA effector molecule homolog OS=Danio rerio GN=srrt PE=2
SV=1
Length = 896
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 2 SYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHP 54
++K+F+ L+D + E+ +RY EYK ++ Q + FF AHKDEEW + KYHP
Sbjct: 155 TFKEFLISLDDSVDETESVKRYNEYKIDFRRQQMQDFFLAHKDEEWFRSKYHP 207
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 206 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDIT-NNGAEWEKK 258
V++LD L+ YL +H +DYY E G+ HVR + IT ++W+K
Sbjct: 637 VKVLDRLLFYLRIVHSIDYYNTCEYPSEDEMPNRCGIIHVRGPIPPNRITLREVSDWQKT 696
Query: 259 LD------FRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKG 312
+ F +E L S+D M KD ++ FV E K+ C G
Sbjct: 697 FEEKMGPLFSVKENL-SEDEAAKMGRKD-----PEQEVEKFVVANTQELGKDKWLCPLSG 750
Query: 313 CTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
K F EFV KH+ KH + + E+ +V ++F N++ D P
Sbjct: 751 --KKFKGPEFVRKHILNKHGDKIEEVKKEV---VFFNNFLMDAKRP 791
>sp|Q966L5|SRRT_CAEEL Serrate RNA effector molecule homolog OS=Caenorhabditis elegans
GN=E01A2.2 PE=3 SV=1
Length = 712
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 2 SYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHP 54
++K+F+ EDDI +A ++Y EYK+E+ Q FF AHKDEEW + KY P
Sbjct: 86 TFKKFLTSQEDDISEEDAIKKYNEYKTEHRKHQLERFFRAHKDEEWFRLKYKP 138
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 33/185 (17%)
Query: 206 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAE---GKSSDITNNGA--- 253
++ LD LI YL +H +D+Y ++ GL HVR + G S +GA
Sbjct: 457 LKALDLLIVYLRIVHSIDFYNHGHYAQEDSMPNRCGLIHVRGQPPSGVSITTDEDGALVV 516
Query: 254 ------EWEKKLDFRWQERL-----RSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKY 302
++ + R ++ L S++ LE M KD ++ F++K E
Sbjct: 517 PQKFVNDFISGFNSRIEKGLIEKQYVSEEELEKMGKKD-----GEKEVEAFIQKNTVELA 571
Query: 303 GWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPGGTP 362
K+ C G K F EF+ KHL+ KH + + E + E +F NY+ D P
Sbjct: 572 KDKWLCPLSG--KKFKGPEFIRKHLQSKHEDKLEEARA---EADFFNNYLADAQRPVDCE 626
Query: 363 VMQQP 367
Q P
Sbjct: 627 PKQAP 631
>sp|A8XEG9|SRRT_CAEBR Serrate RNA effector molecule homolog OS=Caenorhabditis briggsae
GN=CBG12064 PE=3 SV=1
Length = 715
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAV 60
+ +K+F+ EDDI +A ++Y EYK+E+ Q FF AHKDEEW + KY P V
Sbjct: 89 LPFKRFLTNQEDDISEEDAIKKYNEYKNEHRKFQLDRFFRAHKDEEWFRLKYKPEEAKKV 148
Query: 61 IE 62
E
Sbjct: 149 KE 150
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 33/176 (18%)
Query: 206 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAE---GKSSDITNNG---- 252
++ LD LI YL +H +D+Y ++ GL HVR + G S + NG
Sbjct: 460 LKALDLLIIYLRIVHSIDFYNHGHYAQEDSMPNRCGLIHVRGQPPSGASINTDENGDLIV 519
Query: 253 ---------AEWEKKLDFRWQER-LRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKY 302
+ + ++D E+ S++ +E M KD ++ F+ E
Sbjct: 520 PQKFINDFISGFNSRIDKGLIEKQYVSEEDMEKMGKKD-----GEKEVEAFIAINTVELA 574
Query: 303 GWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 358
K+ C G K F EF+ KHL+ KH + + E + E +F NY+ D P
Sbjct: 575 KDKWLCPLSG--KKFKGPEFIRKHLQSKHEDKLEEARA---EADFFNNYLADAQRP 625
>sp|Q60436|SRRT_CRIGR Serrate RNA effector molecule homolog (Fragment) OS=Cricetulus
griseus GN=SRRT PE=2 SV=3
Length = 306
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 206 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITNNGA-EWEKK 258
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 36 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 95
Query: 259 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 318
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 96 FEEKLTPLLSVRESLSEEEAQKMGRKDTEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 153
Query: 319 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 359
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 154 GPEFVRKHIFNKHAEKIEEVKKEV---AFFNNFLTDAKRPA 191
>sp|Q9Z2U2|ZN292_MOUSE Zinc finger protein 292 OS=Mus musculus GN=Zfp292 PE=2 SV=2
Length = 2698
Score = 35.0 bits (79), Expect = 1.5, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 303 GWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333
G K+ C +GCT+ +++++ + KH+K HP+
Sbjct: 1082 GQKFSCQVEGCTRTYNSSQSIGKHMKTAHPD 1112
>sp|A3LQ55|PRP5_PICST Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=PRP5 PE=3 SV=2
Length = 875
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 181 REKSHGSTGPVIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMVETSEAKGLRHVR 240
+E S +G I+I + +GL+ V+ LD +I Y H DY V R R
Sbjct: 574 KEFSSKDSGVDILIATSIAARGLD-VKGLDLVINYDPPNHMEDYVHRVG-------RTGR 625
Query: 241 AEGKSSDITNNGAEWEKKLDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDE 300
A K + IT ++ E+ + + S+ P +D+I + ++ + F+ K++
Sbjct: 626 AGMKGTAITFVSSDQERSVTDLVRAMTMSKIP------EDEIPSRLIEIRNQFLEKVKAG 679
Query: 301 KYGWKYGCGAKGCTKL 316
K+ + +G G KG KL
Sbjct: 680 KFKYSFGFGGKGLEKL 695
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 233,558,549
Number of Sequences: 539616
Number of extensions: 11725327
Number of successful extensions: 34050
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 447
Number of HSP's that attempted gapping in prelim test: 30593
Number of HSP's gapped (non-prelim): 2888
length of query: 541
length of database: 191,569,459
effective HSP length: 122
effective length of query: 419
effective length of database: 125,736,307
effective search space: 52683512633
effective search space used: 52683512633
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)