Query 009169
Match_columns 541
No_of_seqs 175 out of 204
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 20:22:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009169.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009169hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ax1_A Serrate RNA effector mo 100.0 1.9E-98 6E-103 775.5 27.7 351 1-355 3-354 (358)
2 2lv2_A Insulinoma-associated p 83.9 0.56 1.9E-05 38.6 2.6 40 289-333 43-82 (85)
3 2adr_A ADR1; transcription reg 82.5 0.92 3.2E-05 32.9 3.1 40 290-334 18-57 (60)
4 1x5w_A Zinc finger protein 64, 81.8 0.59 2E-05 35.3 1.9 39 290-333 25-63 (70)
5 1bbo_A Human enhancer-binding 81.6 0.76 2.6E-05 32.9 2.3 39 290-333 17-55 (57)
6 1znf_A 31ST zinc finger from X 81.4 0.99 3.4E-05 27.0 2.5 23 306-330 2-24 (27)
7 2d9h_A Zinc finger protein 692 81.2 1.2 4.2E-05 34.1 3.6 28 305-334 38-65 (78)
8 1paa_A Yeast transcription fac 81.1 0.98 3.4E-05 27.7 2.4 26 305-332 2-27 (30)
9 1klr_A Zinc finger Y-chromosom 80.9 0.82 2.8E-05 27.8 2.0 27 305-333 2-28 (30)
10 3mjh_B Early endosome antigen 79.7 0.75 2.6E-05 32.5 1.6 27 305-333 5-31 (34)
11 3uk3_C Zinc finger protein 217 78.9 1.7 5.8E-05 31.0 3.5 38 290-332 20-57 (57)
12 2gqj_A Zinc finger protein KIA 78.5 0.94 3.2E-05 36.9 2.2 27 305-333 54-80 (98)
13 2yt9_A Zinc finger-containing 77.8 2 7E-05 33.8 3.9 41 290-333 51-91 (95)
14 1zfd_A SWI5; DNA binding motif 77.8 1.2 4.2E-05 27.9 2.1 26 305-330 3-28 (32)
15 2elx_A Zinc finger protein 406 77.6 0.95 3.3E-05 28.9 1.6 27 305-333 7-33 (35)
16 1sp2_A SP1F2; zinc finger, tra 77.4 1.1 3.9E-05 27.9 1.9 27 305-331 2-28 (31)
17 1ard_A Yeast transcription fac 75.9 1.2 4.1E-05 26.9 1.6 25 305-331 2-26 (29)
18 1bhi_A CRE-BP1, ATF-2; CRE bin 75.2 1.1 3.7E-05 29.4 1.4 25 305-329 6-30 (38)
19 3iuf_A Zinc finger protein UBI 74.7 1.4 4.9E-05 31.2 2.0 27 305-333 7-33 (48)
20 1va1_A Transcription factor SP 74.5 1 3.6E-05 29.7 1.1 25 305-329 8-32 (37)
21 1p7a_A BF3, BKLF, kruppel-like 74.5 1.8 6.1E-05 28.1 2.3 24 305-330 11-34 (37)
22 2elo_A Zinc finger protein 406 74.1 1.1 3.7E-05 29.2 1.1 27 305-333 9-35 (37)
23 1x6e_A Zinc finger protein 24; 74.0 1.8 6.2E-05 32.8 2.6 37 290-331 30-66 (72)
24 2dlq_A GLI-kruppel family memb 73.7 2.2 7.7E-05 35.0 3.3 39 290-333 82-120 (124)
25 2m0d_A Zinc finger and BTB dom 72.9 1.3 4.3E-05 26.9 1.2 25 305-331 3-27 (30)
26 2ct1_A Transcriptional repress 72.3 1.6 5.6E-05 33.4 1.9 27 305-333 45-71 (77)
27 2lce_A B-cell lymphoma 6 prote 72.2 2 6.9E-05 32.6 2.4 39 290-333 33-71 (74)
28 1rik_A E6APC1 peptide; E6-bind 71.4 1.4 4.7E-05 26.7 1.1 24 305-330 2-25 (29)
29 2elr_A Zinc finger protein 406 71.3 1.8 6.1E-05 27.8 1.7 25 305-331 9-33 (36)
30 2drp_A Protein (tramtrack DNA- 71.0 1.8 6.2E-05 31.9 1.9 26 305-332 40-65 (66)
31 2kvg_A Zinc finger and BTB dom 70.8 1.8 6.3E-05 26.2 1.6 23 305-329 3-25 (27)
32 2m0e_A Zinc finger and BTB dom 70.0 1.7 5.7E-05 26.1 1.2 25 305-331 2-26 (29)
33 2lvt_A Zinc finger and BTB dom 72.6 0.94 3.2E-05 27.7 0.0 26 305-332 2-27 (29)
34 2elm_A Zinc finger protein 406 69.6 1.1 3.7E-05 29.6 0.3 26 305-332 9-34 (37)
35 2kvh_A Zinc finger and BTB dom 69.3 2.4 8.3E-05 25.4 1.9 23 305-329 3-25 (27)
36 2elv_A Zinc finger protein 406 69.1 2 6.8E-05 27.8 1.5 23 305-329 9-31 (36)
37 2eln_A Zinc finger protein 406 68.8 2.5 8.5E-05 29.5 2.1 25 305-329 9-33 (38)
38 2dlk_A Novel protein; ZF-C2H2 68.7 2.9 9.8E-05 31.8 2.6 39 289-330 24-63 (79)
39 1rim_A E6APC2 peptide; E6-bind 68.6 2.5 8.6E-05 27.2 2.0 24 305-330 2-25 (33)
40 1srk_A Zinc finger protein ZFP 68.3 2 6.9E-05 27.4 1.4 25 305-331 7-31 (35)
41 2dmd_A Zinc finger protein 64, 67.9 2.8 9.7E-05 33.0 2.5 39 290-333 52-90 (96)
42 2lvr_A Zinc finger and BTB dom 71.0 1.1 3.7E-05 27.4 0.0 26 305-332 3-28 (30)
43 2els_A Zinc finger protein 406 67.0 1.9 6.6E-05 27.8 1.1 25 305-331 9-33 (36)
44 2djr_A Zinc finger BED domain- 66.8 3.3 0.00011 34.1 2.7 33 304-338 27-66 (76)
45 2ab3_A ZNF29; zinc finger prot 66.4 3.1 0.00011 24.9 2.0 25 305-329 2-26 (29)
46 2m0f_A Zinc finger and BTB dom 66.4 1.7 5.8E-05 26.1 0.7 23 305-329 2-24 (29)
47 2gli_A Protein (five-finger GL 66.3 3.2 0.00011 35.7 2.7 40 290-332 115-155 (155)
48 2epx_A Zinc finger protein 28 65.6 3.9 0.00013 27.9 2.6 26 305-332 12-37 (47)
49 1zw8_A Zinc-responsive transcr 65.6 3.8 0.00013 31.8 2.8 27 306-332 2-28 (64)
50 2ep1_A Zinc finger protein 484 65.4 3.1 0.0001 28.4 2.0 25 305-331 12-36 (46)
51 2epa_A Krueppel-like factor 10 65.4 4 0.00014 30.6 2.8 34 292-328 37-70 (72)
52 2elq_A Zinc finger protein 406 65.4 2.5 8.7E-05 27.2 1.5 24 305-330 9-32 (36)
53 2cot_A Zinc finger protein 435 65.3 2.8 9.5E-05 32.1 1.9 38 290-332 34-71 (77)
54 2en7_A Zinc finger protein 268 65.3 2.8 9.4E-05 28.3 1.7 23 305-329 12-34 (44)
55 2elt_A Zinc finger protein 406 65.3 2.2 7.6E-05 27.3 1.1 24 305-330 9-32 (36)
56 2kvf_A Zinc finger and BTB dom 65.2 3.1 0.00011 25.0 1.8 23 305-329 3-25 (28)
57 2ctd_A Zinc finger protein 512 65.2 3.4 0.00012 34.0 2.5 38 290-333 51-88 (96)
58 1ncs_A Peptide M30F, transcrip 65.1 2 6.7E-05 30.2 0.9 26 305-330 18-43 (47)
59 2ct5_A Zinc finger BED domain 64.9 4.7 0.00016 32.9 3.2 34 304-339 28-64 (73)
60 2eom_A ZFP-95, zinc finger pro 64.7 2.8 9.5E-05 28.9 1.7 25 305-331 12-36 (46)
61 1ubd_C Protein (YY1 zinc finge 64.5 4.4 0.00015 33.5 3.1 42 290-334 80-121 (124)
62 1a1h_A QGSR zinc finger peptid 64.4 5.1 0.00018 31.0 3.4 39 290-333 50-88 (90)
63 2emi_A Zinc finger protein 484 64.0 2.7 9.1E-05 28.8 1.4 25 305-331 12-36 (46)
64 2dlk_A Novel protein; ZF-C2H2 63.9 3.6 0.00012 31.2 2.3 28 305-332 7-34 (79)
65 2ept_A Zinc finger protein 32; 63.5 2.5 8.7E-05 28.2 1.2 24 305-330 10-33 (41)
66 2eq2_A Zinc finger protein 347 63.5 3.2 0.00011 28.4 1.8 24 305-330 12-35 (46)
67 2epa_A Krueppel-like factor 10 63.0 2.8 9.6E-05 31.5 1.5 28 305-332 17-44 (72)
68 2csh_A Zinc finger protein 297 62.9 5 0.00017 32.6 3.1 41 291-336 54-94 (110)
69 2eq1_A Zinc finger protein 347 62.8 3.1 0.00011 28.4 1.6 24 305-330 12-35 (46)
70 2emg_A Zinc finger protein 484 62.8 3.2 0.00011 28.4 1.6 24 305-330 12-35 (46)
71 2yrm_A B-cell lymphoma 6 prote 62.6 3.9 0.00013 27.7 2.1 26 305-332 10-35 (43)
72 2epu_A Zinc finger protein 32; 62.2 2.4 8.2E-05 29.0 0.9 24 305-330 12-35 (45)
73 2enf_A Zinc finger protein 347 62.0 3.8 0.00013 28.0 1.9 24 305-330 12-35 (46)
74 2yth_A Zinc finger protein 224 61.9 4 0.00014 28.0 2.0 24 305-330 12-35 (46)
75 2enh_A Zinc finger protein 28 61.8 3.3 0.00011 28.4 1.6 24 305-330 12-35 (46)
76 2eoz_A Zinc finger protein 473 61.7 2.5 8.5E-05 29.1 0.9 25 305-331 12-36 (46)
77 2en9_A Zinc finger protein 28 61.7 3.5 0.00012 28.2 1.7 24 305-330 12-35 (46)
78 2ct1_A Transcriptional repress 61.3 3.2 0.00011 31.7 1.6 27 305-333 15-41 (77)
79 2ytr_A Zinc finger protein 347 61.2 3.8 0.00013 27.9 1.8 24 305-330 12-35 (46)
80 2eop_A Zinc finger protein 268 61.0 3.9 0.00013 27.9 1.8 23 305-329 12-34 (46)
81 2eoh_A Zinc finger protein 28 60.9 3.5 0.00012 28.3 1.6 23 305-329 12-34 (46)
82 2el5_A Zinc finger protein 268 60.9 3.3 0.00011 27.7 1.4 25 305-331 10-34 (42)
83 1llm_C Chimera of ZIF23-GCN4; 60.8 9 0.00031 29.9 4.2 40 290-334 19-58 (88)
84 2eos_A B-cell lymphoma 6 prote 60.8 3.5 0.00012 27.6 1.5 25 305-331 11-35 (42)
85 2epz_A Zinc finger protein 28 60.7 3.9 0.00013 27.9 1.8 24 305-330 12-35 (46)
86 2ytp_A Zinc finger protein 484 60.7 2.9 0.0001 28.7 1.2 24 305-330 12-35 (46)
87 2gqj_A Zinc finger protein KIA 60.6 5.1 0.00017 32.4 2.8 35 293-332 15-50 (98)
88 2ytf_A Zinc finger protein 268 60.6 3.1 0.00011 28.4 1.3 25 305-331 12-36 (46)
89 2ep3_A Zinc finger protein 484 60.5 3.3 0.00011 28.3 1.4 24 305-330 12-35 (46)
90 2eq4_A Zinc finger protein 224 60.5 3.8 0.00013 27.9 1.7 24 305-330 12-35 (46)
91 2emk_A Zinc finger protein 28 60.1 3.8 0.00013 28.1 1.7 24 305-330 12-35 (46)
92 2em6_A Zinc finger protein 224 60.1 4 0.00014 28.0 1.8 23 305-329 12-34 (46)
93 2yte_A Zinc finger protein 473 60.1 4 0.00014 27.1 1.7 23 305-329 10-32 (42)
94 2epv_A Zinc finger protein 268 60.0 3.6 0.00012 28.0 1.5 24 305-330 12-35 (44)
95 2yrj_A Zinc finger protein 473 60.0 3.1 0.00011 28.3 1.2 24 305-330 12-35 (46)
96 1njq_A Superman protein; zinc- 59.8 3.2 0.00011 27.4 1.2 25 305-331 6-30 (39)
97 2ytt_A Zinc finger protein 473 59.7 3.3 0.00011 28.4 1.2 23 305-329 12-34 (46)
98 1f2i_G Fusion of N-terminal 17 59.6 7.1 0.00024 29.2 3.3 23 305-329 49-71 (73)
99 2eov_A Zinc finger protein 484 59.4 4.1 0.00014 27.7 1.7 25 305-331 12-36 (46)
100 2eon_A ZFP-95, zinc finger pro 59.3 3.7 0.00013 28.2 1.5 23 305-329 12-34 (46)
101 2em4_A Zinc finger protein 28 59.2 3.5 0.00012 28.3 1.3 25 305-331 12-36 (46)
102 2yti_A Zinc finger protein 347 59.0 4.1 0.00014 27.8 1.7 23 305-329 12-34 (46)
103 4gzn_C ZFP-57, zinc finger pro 59.0 6.9 0.00023 29.9 3.1 37 290-332 20-56 (60)
104 2ytq_A Zinc finger protein 268 59.0 4.1 0.00014 27.9 1.7 23 305-329 12-34 (46)
105 1yui_A GAGA-factor; complex (D 58.8 3.8 0.00013 29.4 1.5 26 305-332 24-49 (54)
106 2eq3_A Zinc finger protein 347 58.8 3 0.0001 28.4 1.0 23 305-329 12-34 (46)
107 2emf_A Zinc finger protein 484 58.7 3.7 0.00013 28.1 1.4 25 305-331 12-36 (46)
108 2eou_A Zinc finger protein 473 58.7 4.4 0.00015 27.4 1.8 23 305-329 12-34 (44)
109 2ebt_A Krueppel-like factor 5; 58.7 8.6 0.00029 30.3 3.8 34 291-329 64-97 (100)
110 2epc_A Zinc finger protein 32; 58.7 3.4 0.00012 27.5 1.2 23 305-329 11-33 (42)
111 2em0_A Zinc finger protein 224 58.6 4.8 0.00016 27.5 2.0 23 305-329 12-34 (46)
112 2em3_A Zinc finger protein 28 58.5 3.3 0.00011 28.3 1.1 24 305-330 12-35 (46)
113 2eml_A Zinc finger protein 28 58.4 3.9 0.00013 27.9 1.5 25 305-331 12-36 (46)
114 2ytn_A Zinc finger protein 347 58.4 4.4 0.00015 27.6 1.8 24 305-330 12-35 (46)
115 2eps_A POZ-, at HOOK-, and zin 58.3 4.9 0.00017 28.8 2.1 26 305-332 12-37 (54)
116 2eof_A Zinc finger protein 268 58.3 3.9 0.00013 27.5 1.4 23 305-329 12-34 (44)
117 2kmk_A Zinc finger protein GFI 58.2 8.5 0.00029 29.0 3.5 35 291-330 46-80 (82)
118 2j7j_A Transcription factor II 58.0 7.1 0.00024 29.6 3.1 25 305-329 31-55 (85)
119 2emj_A Zinc finger protein 28 57.8 3.9 0.00013 28.0 1.4 23 305-329 12-34 (46)
120 2eow_A Zinc finger protein 347 57.8 3.6 0.00012 28.0 1.2 24 305-330 12-35 (46)
121 2em5_A ZFP-95, zinc finger pro 57.5 3.7 0.00013 28.1 1.2 23 305-329 12-34 (46)
122 2emy_A Zinc finger protein 268 57.4 3.9 0.00014 27.9 1.4 24 305-330 12-35 (46)
123 2ytm_A Zinc finger protein 28 57.4 6 0.00021 27.1 2.3 23 305-329 12-34 (46)
124 2em7_A Zinc finger protein 224 57.3 4.2 0.00014 27.7 1.5 24 305-330 12-35 (46)
125 2yts_A Zinc finger protein 484 57.2 3.9 0.00013 27.8 1.3 23 305-329 12-34 (46)
126 2lvu_A Zinc finger and BTB dom 62.0 2.2 7.6E-05 25.4 0.0 23 305-329 2-24 (26)
127 2ytb_A Zinc finger protein 32; 57.2 3.2 0.00011 27.6 0.8 24 305-330 11-34 (42)
128 2emm_A ZFP-95, zinc finger pro 57.0 3.7 0.00013 28.0 1.2 24 305-330 12-35 (46)
129 2el4_A Zinc finger protein 268 57.0 3.9 0.00013 27.9 1.3 23 305-329 12-34 (46)
130 1x3c_A Zinc finger protein 292 56.9 6.7 0.00023 32.2 2.8 28 305-332 27-54 (73)
131 2emx_A Zinc finger protein 268 56.8 3.9 0.00013 27.6 1.2 24 305-330 10-33 (44)
132 2elz_A Zinc finger protein 224 56.8 4.7 0.00016 27.6 1.7 23 305-329 12-34 (46)
133 2yto_A Zinc finger protein 484 56.7 3.8 0.00013 28.1 1.1 23 305-329 12-34 (46)
134 2elp_A Zinc finger protein 406 56.6 3.1 0.0001 27.0 0.6 23 305-329 9-32 (37)
135 2ene_A Zinc finger protein 347 56.5 3.8 0.00013 28.0 1.1 23 305-329 12-34 (46)
136 2ep0_A Zinc finger protein 28 56.4 4 0.00014 27.8 1.3 23 305-329 12-34 (46)
137 2eoj_A Zinc finger protein 268 56.1 3.8 0.00013 27.6 1.1 23 305-329 12-34 (44)
138 2ee8_A Protein ODD-skipped-rel 56.1 6.1 0.00021 31.7 2.5 27 305-333 73-99 (106)
139 2el6_A Zinc finger protein 268 56.0 4.6 0.00016 27.6 1.5 25 305-331 12-36 (46)
140 2ytj_A Zinc finger protein 484 55.7 4 0.00014 27.8 1.2 23 305-329 12-34 (46)
141 2eq0_A Zinc finger protein 347 55.6 4 0.00014 27.9 1.1 24 305-330 12-35 (46)
142 2ytk_A Zinc finger protein 347 55.6 4.3 0.00015 27.7 1.3 24 305-330 12-35 (46)
143 2ema_A Zinc finger protein 347 55.2 4.1 0.00014 27.8 1.1 23 305-329 12-34 (46)
144 2drp_A Protein (tramtrack DNA- 55.0 5.8 0.0002 29.1 2.1 25 305-331 10-34 (66)
145 2eme_A Zinc finger protein 473 55.0 4.8 0.00016 27.4 1.5 24 305-330 12-35 (46)
146 2eoq_A Zinc finger protein 224 54.9 5.1 0.00018 27.3 1.6 23 305-329 12-34 (46)
147 2em9_A Zinc finger protein 224 54.9 4.6 0.00016 27.4 1.4 23 305-329 12-34 (46)
148 2en6_A Zinc finger protein 268 54.8 3.8 0.00013 28.0 0.9 24 305-330 12-35 (46)
149 2eor_A Zinc finger protein 224 54.8 3.3 0.00011 28.2 0.6 23 305-329 12-34 (46)
150 1wjp_A Zinc finger protein 295 54.7 7.3 0.00025 31.5 2.8 27 305-333 69-95 (107)
151 2epq_A POZ-, at HOOK-, and zin 54.3 4.2 0.00014 27.7 1.1 25 305-331 10-34 (45)
152 2emh_A Zinc finger protein 484 54.2 3.5 0.00012 28.2 0.7 23 305-329 12-34 (46)
153 1bbo_A Human enhancer-binding 54.1 6.4 0.00022 27.9 2.1 25 306-332 2-26 (57)
154 2rpc_A Zinc finger protein ZIC 53.9 4.9 0.00017 34.7 1.6 41 290-333 108-148 (155)
155 2emb_A Zinc finger protein 473 53.9 4.8 0.00017 27.2 1.3 24 305-330 12-35 (44)
156 2ely_A Zinc finger protein 224 53.8 5.4 0.00019 27.3 1.6 24 305-330 12-35 (46)
157 2emp_A Zinc finger protein 347 53.8 3.6 0.00012 28.1 0.6 23 305-329 12-34 (46)
158 2eoe_A Zinc finger protein 347 53.6 4.9 0.00017 27.3 1.3 24 305-330 12-35 (46)
159 2en3_A ZFP-95, zinc finger pro 53.6 3.9 0.00013 27.9 0.8 23 305-329 12-34 (46)
160 2dmi_A Teashirt homolog 3; zin 53.5 6.7 0.00023 32.0 2.4 27 305-333 80-106 (115)
161 2yu5_A Zinc finger protein 473 53.4 4.3 0.00015 27.4 1.0 25 305-331 12-36 (44)
162 2emz_A ZFP-95, zinc finger pro 53.3 5.8 0.0002 27.1 1.7 23 305-329 12-34 (46)
163 3uk3_C Zinc finger protein 217 53.2 4.3 0.00015 28.8 1.0 23 305-329 4-26 (57)
164 1f2i_G Fusion of N-terminal 17 53.0 3.9 0.00013 30.7 0.8 25 305-329 19-43 (73)
165 2wbt_A B-129; zinc finger; 2.7 52.9 4.2 0.00014 34.1 1.0 28 305-334 100-127 (129)
166 2wbs_A Krueppel-like factor 4; 52.8 5.7 0.0002 30.6 1.8 25 305-329 5-29 (89)
167 2ep2_A Zinc finger protein 484 52.8 4.9 0.00017 27.4 1.2 24 305-330 12-35 (46)
168 2ebt_A Krueppel-like factor 5; 52.6 9.2 0.00032 30.1 3.0 40 290-332 33-72 (100)
169 2yt9_A Zinc finger-containing 52.2 7.6 0.00026 30.4 2.4 39 290-333 23-61 (95)
170 2em2_A Zinc finger protein 28 52.2 4.9 0.00017 27.5 1.1 24 305-330 12-35 (46)
171 2lt7_A Transcriptional regulat 51.9 8.4 0.00029 33.6 2.9 39 290-333 66-104 (133)
172 2eoy_A Zinc finger protein 473 51.9 5.1 0.00017 27.4 1.2 23 305-329 12-34 (46)
173 2adr_A ADR1; transcription reg 51.9 7.5 0.00026 27.9 2.2 25 305-331 2-26 (60)
174 1x6h_A Transcriptional repress 51.9 5.3 0.00018 30.6 1.4 27 305-333 47-73 (86)
175 2en8_A Zinc finger protein 224 51.8 5.1 0.00018 27.2 1.2 24 305-330 12-35 (46)
176 2eoo_A ZFP-95, zinc finger pro 51.8 4.7 0.00016 27.6 1.0 23 305-329 12-34 (46)
177 2kmk_A Zinc finger protein GFI 51.4 8.8 0.0003 28.9 2.6 38 290-332 17-54 (82)
178 2ee8_A Protein ODD-skipped-rel 51.2 11 0.00037 30.1 3.3 38 290-332 33-70 (106)
179 2en1_A Zinc finger protein 224 51.1 5.1 0.00017 27.3 1.1 24 305-330 12-35 (46)
180 2ysp_A Zinc finger protein 224 51.1 4.5 0.00016 27.6 0.8 23 305-329 12-34 (46)
181 2dmd_A Zinc finger protein 64, 50.8 7.8 0.00027 30.4 2.3 38 290-332 24-61 (96)
182 2csh_A Zinc finger protein 297 50.6 9 0.00031 31.0 2.7 39 290-333 25-63 (110)
183 2eox_A Zinc finger protein 473 50.6 2.9 9.9E-05 28.3 -0.3 25 305-331 12-36 (44)
184 2wbs_A Krueppel-like factor 4; 50.6 12 0.00043 28.6 3.4 34 291-329 54-87 (89)
185 2yso_A ZFP-95, zinc finger pro 50.3 5.6 0.00019 27.1 1.2 24 305-330 12-35 (46)
186 2em8_A Zinc finger protein 224 50.2 7.6 0.00026 26.5 1.9 23 305-329 12-34 (46)
187 2en2_A B-cell lymphoma 6 prote 49.9 7.1 0.00024 25.9 1.7 23 305-329 11-33 (42)
188 2ent_A Krueppel-like factor 15 49.4 6 0.0002 27.0 1.2 25 305-329 12-36 (48)
189 2j7j_A Transcription factor II 49.4 8.3 0.00029 29.2 2.2 26 306-331 59-85 (85)
190 2ytd_A Zinc finger protein 473 48.8 6 0.00021 26.9 1.1 23 305-329 12-34 (46)
191 2ytg_A ZFP-95, zinc finger pro 48.6 4.1 0.00014 27.8 0.3 24 305-330 12-35 (46)
192 2lce_A B-cell lymphoma 6 prote 48.5 7.3 0.00025 29.4 1.7 26 305-332 17-42 (74)
193 2epr_A POZ-, at HOOK-, and zin 48.0 5.7 0.00019 27.6 0.9 25 305-331 12-36 (48)
194 2enc_A Zinc finger protein 224 47.8 6.5 0.00022 26.8 1.2 23 305-329 12-34 (46)
195 2epw_A Zinc finger protein 268 47.5 6.1 0.00021 26.8 1.0 23 305-329 12-34 (46)
196 1a1h_A QGSR zinc finger peptid 47.0 10 0.00034 29.2 2.3 37 290-331 22-58 (90)
197 2jsp_A Transcriptional regulat 46.8 16 0.00055 30.9 3.6 32 304-340 20-51 (87)
198 2lv2_A Insulinoma-associated p 46.7 6.8 0.00023 32.0 1.3 27 305-333 28-54 (85)
199 1x6h_A Transcriptional repress 46.1 7.9 0.00027 29.6 1.6 27 305-333 15-41 (86)
200 2jp9_A Wilms tumor 1; DNA bind 45.9 12 0.0004 30.4 2.7 35 290-329 54-88 (119)
201 1zr9_A Zinc finger protein 593 45.7 9.2 0.00031 34.2 2.1 33 305-339 50-83 (124)
202 2gli_A Protein (five-finger GL 45.4 11 0.00036 32.3 2.5 40 290-332 85-124 (155)
203 1x5w_A Zinc finger protein 64, 45.3 9.3 0.00032 28.4 1.8 25 305-331 9-33 (70)
204 2yu8_A Zinc finger protein 347 44.9 9 0.00031 26.0 1.6 23 305-329 12-34 (46)
205 1zw8_A Zinc-responsive transcr 44.8 20 0.00067 27.7 3.7 28 304-331 37-64 (64)
206 2jp9_A Wilms tumor 1; DNA bind 44.7 18 0.00061 29.2 3.6 37 290-329 82-118 (119)
207 1x6e_A Zinc finger protein 24; 44.5 7.6 0.00026 29.2 1.2 25 305-331 14-38 (72)
208 2epp_A POZ-, at HOOK-, and zin 44.3 12 0.0004 29.4 2.3 26 305-332 13-38 (66)
209 2i13_A AART; DNA binding, zinc 42.7 16 0.00054 32.6 3.2 40 289-333 148-187 (190)
210 2ghf_A ZHX1, zinc fingers and 42.5 13 0.00046 31.2 2.6 25 305-331 50-74 (102)
211 1ubd_C Protein (YY1 zinc finge 42.3 12 0.0004 30.8 2.2 37 291-330 51-87 (124)
212 2rpc_A Zinc finger protein ZIC 42.2 16 0.00054 31.3 3.1 39 291-332 79-117 (155)
213 2ej4_A Zinc finger protein ZIC 42.2 14 0.00048 28.8 2.5 27 305-333 25-51 (95)
214 2ctd_A Zinc finger protein 512 38.3 21 0.00072 29.1 3.1 23 305-329 34-57 (96)
215 4i1l_A Scurfin, forkhead box p 38.0 11 0.00036 32.3 1.2 26 307-332 14-39 (93)
216 2dlq_A GLI-kruppel family memb 37.7 28 0.00094 28.2 3.7 26 305-332 66-91 (124)
217 2d9h_A Zinc finger protein 692 37.2 13 0.00045 28.1 1.6 25 305-331 7-31 (78)
218 2cot_A Zinc finger protein 435 36.7 16 0.00056 27.6 2.1 25 305-331 18-42 (77)
219 2kfq_A FP1; protein, de novo p 36.4 2.4 8.1E-05 27.0 -2.5 23 305-329 2-24 (32)
220 2yrk_A Zinc finger homeobox pr 35.7 16 0.00056 28.4 1.8 31 305-337 13-44 (55)
221 1tf6_A Protein (transcription 32.3 33 0.0011 30.4 3.6 37 290-329 122-158 (190)
222 2elu_A Zinc finger protein 406 32.3 24 0.0008 24.9 2.0 25 305-331 9-33 (37)
223 3foz_A TRNA delta(2)-isopenten 31.2 40 0.0014 34.5 4.4 46 2-48 250-295 (316)
224 2ej4_A Zinc finger protein ZIC 31.1 26 0.00088 27.3 2.4 22 306-329 63-84 (95)
225 1fv5_A First zinc finger of U- 29.9 23 0.00079 24.4 1.7 21 305-327 8-28 (36)
226 4gzn_C ZFP-57, zinc finger pro 29.0 25 0.00085 26.7 1.9 23 305-329 4-26 (60)
227 1llm_C Chimera of ZIF23-GCN4; 28.8 17 0.00057 28.3 0.9 23 305-329 3-25 (88)
228 3cw1_L U1 small nuclear ribonu 27.5 28 0.00094 28.8 2.0 31 305-337 3-36 (77)
229 2eod_A TNF receptor-associated 25.9 21 0.00072 26.3 1.0 22 305-329 10-31 (66)
230 1tf6_A Protein (transcription 25.4 54 0.0019 28.9 3.8 27 305-331 72-98 (190)
231 2eod_A TNF receptor-associated 25.4 33 0.0011 25.2 2.0 34 290-329 25-59 (66)
232 3exa_A TRNA delta(2)-isopenten 24.8 1.5E+02 0.0052 30.2 7.4 47 2-49 242-288 (322)
233 1x6f_A Zinc finger protein 462 24.6 32 0.0011 27.9 1.9 23 305-329 25-47 (88)
234 2i13_A AART; DNA binding, zinc 24.6 35 0.0012 30.2 2.3 37 290-331 121-157 (190)
235 2lt7_A Transcriptional regulat 24.2 52 0.0018 28.4 3.3 36 289-329 37-72 (133)
236 2wbt_A B-129; zinc finger; 2.7 23.5 35 0.0012 28.3 2.0 23 305-329 74-96 (129)
237 2m1l_A Cyclin-dependent kinase 22.4 40 0.0014 27.3 2.0 24 141-164 40-65 (69)
238 2dmi_A Teashirt homolog 3; zin 22.0 40 0.0014 27.2 2.0 23 305-329 19-41 (115)
239 3crm_A TRNA delta(2)-isopenten 21.8 86 0.0029 31.9 4.8 47 2-49 256-302 (323)
240 2ghf_A ZHX1, zinc fingers and 20.8 33 0.0011 28.8 1.3 25 305-331 18-42 (102)
241 1wjp_A Zinc finger protein 295 20.6 51 0.0017 26.3 2.4 23 305-329 16-38 (107)
No 1
>3ax1_A Serrate RNA effector molecule; miRNA processing, protein binding; 2.74A {Arabidopsis thaliana}
Probab=100.00 E-value=1.9e-98 Score=775.48 Aligned_cols=351 Identities=77% Similarity=1.199 Sum_probs=284.6
Q ss_pred CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHhhcCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 009169 1 MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLDLQ 80 (541)
Q Consensus 1 msfKqF~~~~~D~isp~eA~~~Y~eYK~e~~~kq~r~FF~~HK~EeWFrEKY~P~~l~~~~e~R~e~~~~~a~~F~~dLe 80 (541)
|||||||++|+|+|||+||+++|++||.+|.++|++.||++||+++||||||||+++.+++++|++.++++|+.|+++|+
T Consensus 3 msFKqFl~~~~D~isp~eA~~~Y~eYk~e~~~~q~~~FF~~HK~e~WfreKY~P~~l~~~~~~R~e~ak~~a~~F~~~L~ 82 (358)
T 3ax1_A 3 MSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAFFNTHKEEDWLKNKYHPTNLLSVIERRNDLAQKVAKDFLLDLQ 82 (358)
T ss_dssp CCHHHHGGGTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCcccccccCCCCCCCCCChhhHHHhHHHHHHHHHHH
Q 009169 81 SGTLDLGPSVNASSSNKLGQTSEPNSDDDVDNGGKRRRHGRGPAKETDLLSAAPKAHPISSEPRRIQVDIEQAQALVRKL 160 (541)
Q Consensus 81 sG~lD~~p~~~~~~~~~~G~~sd~n~~~e~d~~~K~~R~gw~~~ke~d~~s~aPka~pi~S~p~RI~~Dl~qa~~Li~kL 160 (541)
+|+||++|+++++ +++|.++++|++++.+.++|++++||++.+++|++++||++||+||+|+||.+||+||++||++|
T Consensus 83 ~G~ld~~~~~~~~--~~~~~~~~~~~~d~~~~~~k~~~~g~~~~~~~d~~~~ap~~~P~~S~p~RI~~Dle~a~~Lv~kL 160 (358)
T 3ax1_A 83 SGTLDLGPAVTAL--NKSGRTSEPNSEDEAAGVGKRKRHGMGGAKENELLSAAPKAPSFTSDPKRILTDVEQTQALVRKL 160 (358)
T ss_dssp TTCCCCCSBSSCC--C-----------------------------------CCCBCCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCccccc--cccCCCCCCChhhhhhccccccccCCCcccccchhhcccCCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999888884 68888899888888887888999999999999988999999999999999999999999999999
Q ss_pred hhhhcccccccCCCCcccccccccCC-CCCCceeecccccccCcchhhHHHHHHHHHHHHhhcccccccccccccccccc
Q 009169 161 DSEKGITENILCGSDNDKMNREKSHG-STGPVIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMVETSEAKGLRHV 239 (541)
Q Consensus 161 DaE~gi~~n~L~~~d~~~~~~e~s~~-~~gp~~~~rg~~~~~~~e~~~~LD~lI~YLRrVHs~dYY~~~E~~er~g~~H~ 239 (541)
|+|+||++|+|+.+++...++++++. ++||+++++|+.++++++.+++||++|+|||+||||||||++|++++||++|+
T Consensus 161 D~e~gie~n~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~LD~~i~YLRrVH~~dYY~~~E~~~~~g~~Hv 240 (358)
T 3ax1_A 161 DSEKKIEENVLQGSETEKSGREKLHSGSTGPVVIIRGLTSVKGLEGVELLDTLVTYLWRVHGLDYYGKVETNEAKGLRHV 240 (358)
T ss_dssp HHHHTCCCCTTC---------------CCCCCEEECCSSCCEEECSHHHHHHHHHHHHHHHCEEGGGTEECTTCCSBCCB
T ss_pred HHhhCCcccccccccccccccccccccCCCcchhhccccchhhhhhHHHHHHHHHHHHHHHcccccceEeecCccccCee
Confidence 99999999999998877677677764 78999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcCCCchhHHHHHhHHHHHHHhhccChhhHhhhhchhHHHHHHhhhhHHHhhhhcccCcccccCCCCccccccc
Q 009169 240 RAEGKSSDITNNGAEWEKKLDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 319 (541)
Q Consensus 240 R~~~~~~~~~~~~~~w~kk~d~~~~~~l~~~dp~~~~~~kekid~~~~e~le~~V~k~~dE~~g~K~~C~~~~CtKlFKg 319 (541)
|+++++++ ++..+|+++|+++|+.+|+..||++.++|+++|+++++++|+++|+++++|+|||||+|++++|+|||||
T Consensus 241 R~~~~~~~--~~~~~we~~ld~~w~~~l~~~dp~~~~lg~k~ie~~~~e~l~~~v~k~~dE~~gwK~~C~~~~C~KLFk~ 318 (358)
T 3ax1_A 241 RAEGKVSD--AKGDENESKFDSHWQERLKGQDPLEVMAAKEKIDAAATEALDPHVRKIRDEKYGWKYGCGAKGCTKLFHA 318 (358)
T ss_dssp C------------CHHHHHHHHHHHHHHHSCCHHHHHHCHHHHHHHHHHHHGGGEEEEECSSSSEEEEECSSSCCCEESS
T ss_pred cCCCCCCC--CchhhHHHHHHHHHHHHHcccChHHHHhcCccHHHHHHHHHHHHHHHHhhcccccccCCCCCCcCcccCC
Confidence 99876543 3678999999999999999999999899998999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhhhChHHHHHHHhhHHHHHHHhhhcCCC
Q 009169 320 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDP 355 (541)
Q Consensus 320 ~eFV~KHI~nKH~E~v~~~~~kv~E~~yfnNYl~DP 355 (541)
++||+|||+|||+|+|++++++|+|.+||+|||.--
T Consensus 319 ~eFV~KHi~~KH~e~v~~~~~~v~~~~~~~~~~~~~ 354 (358)
T 3ax1_A 319 AEFVYKHLKLKHTELVTELTTKVREELYFQNYLEHH 354 (358)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999998643
No 2
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=83.86 E-value=0.56 Score=38.61 Aligned_cols=40 Identities=20% Similarity=0.463 Sum_probs=32.5
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 289 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 289 ~le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|..+++..+.|+ .|.|.. |+|.|.....+.+||+..|+.
T Consensus 43 ~L~~H~~~H~~~k---~~~C~~--C~k~F~~~~~L~~H~~~~H~~ 82 (85)
T 2lv2_A 43 AQERHLRLLHAAQ---VFPCKY--CPATFYSSPGLTRHINKCHPS 82 (85)
T ss_dssp HHHHHHHTTSCSS---SEECTT--SSCEESSHHHHHHHHHTTCTT
T ss_pred HHhhhhhhccCCC---ccCCCC--CCCEeCCHHHHHHhCcccCcC
Confidence 4455777666653 699985 999999999999999999975
No 3
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=82.51 E-value=0.92 Score=32.93 Aligned_cols=40 Identities=25% Similarity=0.503 Sum_probs=30.7
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChHH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 334 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E~ 334 (541)
|..+++..+.+ ..|.|.. |+|.|....-+..|+...|...
T Consensus 18 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~ 57 (60)
T 2adr_A 18 LKRHYRSHTNE---KPYPCGL--CNRAFTRRDLLIRHAQKIHSGN 57 (60)
T ss_dssp HHHHHHTTTSS---CSEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred HHHHHHHhCCC---CCccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence 44466554444 2699986 9999999999999999888753
No 4
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=81.83 E-value=0.59 Score=35.30 Aligned_cols=39 Identities=21% Similarity=0.306 Sum_probs=29.4
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
|..+++..+.++ .|.|.+ |+|.|....-+..|+++.|.+
T Consensus 25 L~~H~~~H~~~~---~~~C~~--C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 25 LRIHERIHCTDR---PFKCNY--CSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp HHHHHGGGCCSC---SEECSS--SSCEESSHHHHHHHHHHHHSS
T ss_pred HHHHHHHcCCCC---CEeCCC--CCCccCCHHHHHHHHHHHhCC
Confidence 344555544442 599986 999999999999999887765
No 5
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=81.63 E-value=0.76 Score=32.94 Aligned_cols=39 Identities=28% Similarity=0.438 Sum_probs=29.8
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
|..+++..+.+ -.|.|.. |+|.|....-+..|+...|.+
T Consensus 17 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 55 (57)
T 1bbo_A 17 LKKHIRTHTDV---RPYHCTY--CNFSFKTKGNLTKHMKSKAHS 55 (57)
T ss_dssp HHHHHHHTSSC---CCEECSS--SSCEESSHHHHHHHHHSSSSC
T ss_pred HHHHHHhcCCC---CCccCCC--CCchhcCHHHHHHHHHHhccc
Confidence 44455554444 2699985 999999999999999987765
No 6
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=81.43 E-value=0.99 Score=27.02 Aligned_cols=23 Identities=26% Similarity=0.752 Sum_probs=19.9
Q ss_pred cccCCCCccccccchhHHHHHHhhh
Q 009169 306 YGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 306 ~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
|.|.. |+|.|....-+..|++.-
T Consensus 2 ~~C~~--C~k~f~~~~~l~~H~~~h 24 (27)
T 1znf_A 2 YKCGL--CERSFVEKSALSRHQRVH 24 (27)
T ss_dssp CBCSS--SCCBCSSHHHHHHHGGGT
T ss_pred ccCCC--CCCcCCCHHHHHHHHHHc
Confidence 67875 999999999999998763
No 7
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.22 E-value=1.2 Score=34.11 Aligned_cols=28 Identities=32% Similarity=0.654 Sum_probs=25.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChHH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 334 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E~ 334 (541)
.|.|.. |+|.|....-+.+|++..|+..
T Consensus 38 ~~~C~~--C~k~f~~~~~L~~H~~~~H~~~ 65 (78)
T 2d9h_A 38 RFPCEF--CGKRFEKPDSVAAHRSKSHPAL 65 (78)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHTSTTT
T ss_pred ccCCCC--CCchhCCHHHHHHHHHHhCCCC
Confidence 799986 9999999999999999988763
No 8
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=81.13 E-value=0.98 Score=27.66 Aligned_cols=26 Identities=27% Similarity=0.760 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|.|.. |+|.|.....+..|+...|.
T Consensus 2 ~~~C~~--C~k~f~~~~~l~~H~~~~H~ 27 (30)
T 1paa_A 2 AYACGL--CNRAFTRRDLLIRHAQKIHS 27 (30)
T ss_dssp CSBCTT--TCCBCSSSHHHHHHHTTTSC
T ss_pred CcCCcc--cCcccCChHHHHHHHHHHcc
Confidence 378975 99999999999999766664
No 9
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=80.89 E-value=0.82 Score=27.77 Aligned_cols=27 Identities=26% Similarity=0.487 Sum_probs=22.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
-|.|.. |+|.|....-+..|+..-|.+
T Consensus 2 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~ 28 (30)
T 1klr_A 2 TYQCQY--CEFRSADSSNLKTHIKTKHSK 28 (30)
T ss_dssp CCCCSS--SSCCCSCSHHHHHHHHHHTSS
T ss_pred CccCCC--CCCccCCHHHHHHHHHHHccC
Confidence 378975 999999999999999876654
No 10
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=79.69 E-value=0.75 Score=32.54 Aligned_cols=27 Identities=26% Similarity=0.477 Sum_probs=25.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
-|.|++ |-|-|.+++-+.+|-.++|.+
T Consensus 5 GFiCP~--C~~~l~s~~~L~~Hye~~H~~ 31 (34)
T 3mjh_B 5 GFICPQ--CMKSLGSADELFKHYEAVHDA 31 (34)
T ss_dssp EEECTT--TCCEESSHHHHHHHHHHHTSS
T ss_pred ccCCcH--HHHHcCCHHHHHHHHHhcccc
Confidence 389997 999999999999999999975
No 11
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=78.94 E-value=1.7 Score=31.02 Aligned_cols=38 Identities=26% Similarity=0.404 Sum_probs=28.2
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
|..+++..+.++ .|.|.. |+|.|....-+..|+...|.
T Consensus 20 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 20 LNIHLRTHTGEK---PYKCEF--CEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp HHHHHHHHHCCC---CEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred HHHHHHHcCCCC---CcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence 344555544442 589986 99999999999999988773
No 12
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.54 E-value=0.94 Score=36.95 Aligned_cols=27 Identities=22% Similarity=0.431 Sum_probs=20.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|.|.+ |+|.|+...-+.+|++..|.+
T Consensus 54 ~~~C~~--C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 54 ALKCQH--CRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp HHSCSS--SCCCCSCHHHHHHHHHHHSCS
T ss_pred CEECCC--CCCccCCHHHHHHHHHHHcCC
Confidence 577875 888888888888887776654
No 13
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=77.82 E-value=2 Score=33.79 Aligned_cols=41 Identities=27% Similarity=0.459 Sum_probs=29.4
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
|..+++....+. +..|.|.. |+|.|....-+.+||+..|..
T Consensus 51 l~~H~~~h~~~~-~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 91 (95)
T 2yt9_A 51 MSYHVRSHDGSV-GKPYICQS--CGKGFSRPDHLNGHIKQVHSG 91 (95)
T ss_dssp HHHHHHHHCCCC-CSSBCCSS--SCCCBSSHHHHHHHHHHTSCC
T ss_pred HHHHHHHhcCCC-CCceECCC--ccchhCCHHHHHHHHHHhcCC
Confidence 344555433331 13689985 999999999999999988863
No 14
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=77.78 E-value=1.2 Score=27.93 Aligned_cols=26 Identities=31% Similarity=0.588 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|....|+|.|....-+..|+..-
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~H 28 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKSH 28 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHHc
Confidence 47897446999999999999998763
No 15
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=77.63 E-value=0.95 Score=28.89 Aligned_cols=27 Identities=26% Similarity=0.503 Sum_probs=22.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|.|.. |+|.|....-+..|+..-+.+
T Consensus 7 ~~~C~~--C~k~f~~~~~L~~H~~~h~~~ 33 (35)
T 2elx_A 7 GYVCAL--CLKKFVSSIRLRSHIREVHGA 33 (35)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHTSCT
T ss_pred CeECCC--CcchhCCHHHHHHHHHHHcCC
Confidence 589985 999999999999999875543
No 16
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=77.37 E-value=1.1 Score=27.94 Aligned_cols=27 Identities=19% Similarity=0.404 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|....|+|.|....-+..|+..-+
T Consensus 2 p~~C~~~~C~k~f~~~~~L~~H~~~H~ 28 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQRHKRTHT 28 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred CcCCcCCCCCcccCCHhHHHHHHHHhc
Confidence 378874569999999999999997633
No 17
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=75.89 E-value=1.2 Score=26.91 Aligned_cols=25 Identities=24% Similarity=0.655 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 2 ~~~C~~--C~~~f~~~~~l~~H~~~h~ 26 (29)
T 1ard_A 2 SFVCEV--CTRAFARQEHLKRHYRSHT 26 (29)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHHHS
T ss_pred CeECCC--CCcccCCHHHHHHHHHHhc
Confidence 378975 9999999999999987643
No 18
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=75.22 E-value=1.1 Score=29.45 Aligned_cols=25 Identities=24% Similarity=0.525 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.+..|+|.|....-+..|+..
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~~ 30 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKHK 30 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHHH
Confidence 5899866799999999999999875
No 19
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=74.73 E-value=1.4 Score=31.21 Aligned_cols=27 Identities=22% Similarity=0.445 Sum_probs=23.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|.|.+ |+|.|....-+.+|++..|..
T Consensus 7 p~~C~~--C~k~F~~~~~L~~H~~~~H~~ 33 (48)
T 3iuf_A 7 PYACDI--CGKRYKNRPGLSYHYAHSHLA 33 (48)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHSSCC
T ss_pred CEECCC--cCcccCCHHHHHHHhhhhcCC
Confidence 589986 999999999999999855653
No 20
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=74.53 E-value=1 Score=29.72 Aligned_cols=25 Identities=24% Similarity=0.608 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.+..|+|.|.....+..|+..
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 5899766799999999999999875
No 21
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=74.45 E-value=1.8 Score=28.10 Aligned_cols=24 Identities=21% Similarity=0.548 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|.....+..|+..-
T Consensus 11 ~~~C~~--C~k~f~~~~~l~~H~~~H 34 (37)
T 1p7a_A 11 PFQCPD--CDRSFSRSDHLALHRKRH 34 (37)
T ss_dssp SBCCTT--TCCCBSSHHHHHHHHGGG
T ss_pred CccCCC--CCcccCcHHHHHHHHHHh
Confidence 689985 999999999999998763
No 22
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.14 E-value=1.1 Score=29.19 Aligned_cols=27 Identities=37% Similarity=0.891 Sum_probs=22.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|.|.. |+|.|....-+..|+..-+.+
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~ 35 (37)
T 2elo_A 9 SYSCPV--CEKSFSEDRLIKSHIKTNHPE 35 (37)
T ss_dssp CCEETT--TTEECSSHHHHHHHHHHHCSS
T ss_pred CcCCCC--CCCccCCHHHHHHHHHHHcCC
Confidence 589985 999999999999999875543
No 23
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=73.98 E-value=1.8 Score=32.78 Aligned_cols=37 Identities=27% Similarity=0.400 Sum_probs=27.2
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhC
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
|..+++....++ .|.|.+ |.|.|....-+.+|++.-+
T Consensus 30 L~~H~~~h~~~~---~~~C~~--C~~~f~~~~~L~~H~~~H~ 66 (72)
T 1x6e_A 30 LVQHQRVHTGEK---PYKCLE--CGKAFSQNSGLINHQRIHT 66 (72)
T ss_dssp HHHHHHGGGCSC---CEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCC---CeECCC--CCcccCCHHHHHHHHHhcC
Confidence 444555544442 689986 9999999999999987643
No 24
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=73.74 E-value=2.2 Score=35.00 Aligned_cols=39 Identities=21% Similarity=0.393 Sum_probs=30.2
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
|..+++....++ .|.|.+ |+|.|....-+.+|+.+.|..
T Consensus 82 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 82 LRLHMVSHTGEM---PYKCSS--CSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp HHHHHHHHSSSC---SEECSS--SCCEESSHHHHHHHHHHTSSC
T ss_pred HHHHHHHcCCCC---CccCCC--ccchhCCHHHHHHHHHHHCCC
Confidence 444555544442 599986 999999999999999999964
No 25
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=72.85 E-value=1.3 Score=26.86 Aligned_cols=25 Identities=24% Similarity=0.549 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 3 ~~~C~~--C~~~f~~~~~l~~H~~~h~ 27 (30)
T 2m0d_A 3 PYQCDY--CGRSFSDPTSKMRHLETHD 27 (30)
T ss_dssp CEECTT--TCCEESCHHHHHHHHHTTC
T ss_pred CccCCC--CCcccCCHHHHHHHHHHhc
Confidence 478985 9999999999999987643
No 26
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=72.32 E-value=1.6 Score=33.43 Aligned_cols=27 Identities=22% Similarity=0.480 Sum_probs=24.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|.|.. |+|.|....-+.+|++..|+.
T Consensus 45 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 45 KFHCPH--CDTVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SEECSS--SSCEESSHHHHHHHHHHTSCC
T ss_pred ccCCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 699985 999999999999999998864
No 27
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=72.15 E-value=2 Score=32.61 Aligned_cols=39 Identities=23% Similarity=0.433 Sum_probs=27.4
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
|..+++....++ .|.|.+ |+|.|....-+..|++.-+.+
T Consensus 33 l~~H~~~H~~~~---~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 71 (74)
T 2lce_A 33 LASHKTVHTGEK---PYRCNI--CGAQFNRPANLKTHTRIHSGE 71 (74)
T ss_dssp HHHHHHHHCCCC---SEECTT--TCCEESCHHHHHHHHHHHCCS
T ss_pred HHHHHHHcCCCC---CEECCC--CCchhCCHHHHHHHHHhcCCC
Confidence 444555544442 589985 999999999999998765443
No 28
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=71.36 E-value=1.4 Score=26.73 Aligned_cols=24 Identities=29% Similarity=0.705 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|.....+..|+..-
T Consensus 2 ~~~C~~--C~k~f~~~~~l~~H~~~H 25 (29)
T 1rik_A 2 KFACPE--CPKRFMRSDHLTLHILLH 25 (29)
T ss_dssp CEECSS--SSCEESCSHHHHHHHTGG
T ss_pred CccCCC--CCchhCCHHHHHHHHHHh
Confidence 378975 999999999999999763
No 29
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.34 E-value=1.8 Score=27.82 Aligned_cols=25 Identities=24% Similarity=0.398 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elr_A 9 THLCDM--CGKKFKSKGTLKSHKLLHT 33 (36)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHHHHS
T ss_pred CeecCc--CCCCcCchHHHHHHHHHhc
Confidence 589985 9999999999999987643
No 30
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=70.96 E-value=1.8 Score=31.94 Aligned_cols=26 Identities=31% Similarity=0.579 Sum_probs=23.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|.|.. |+|.|....-+..|++..|.
T Consensus 40 ~~~C~~--C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 40 VYPCPF--CFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred CeECCC--CCCccCCHHHHHHHHHHHcC
Confidence 699985 99999999999999998884
No 31
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=70.77 E-value=1.8 Score=26.25 Aligned_cols=23 Identities=17% Similarity=0.379 Sum_probs=20.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 3 ~~~C~~--C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvg_A 3 PYRCPL--CRAGCPSLASMQAHMRG 25 (27)
T ss_dssp TEEETT--TTEEESCHHHHHHHHTT
T ss_pred CcCCCC--CCcccCCHHHHHHHHHh
Confidence 478985 99999999999999864
No 32
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=70.04 E-value=1.7 Score=26.06 Aligned_cols=25 Identities=28% Similarity=0.537 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 2 ~~~C~~--C~~~f~~~~~l~~H~~~h~ 26 (29)
T 2m0e_A 2 EHKCPH--CDKKFNQVGNLKAHLKIHI 26 (29)
T ss_dssp CCCCSS--CCCCCCTTTHHHHHHHHHH
T ss_pred CCcCCC--CCcccCCHHHHHHHHHHhc
Confidence 378975 9999999999999987633
No 33
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=72.59 E-value=0.94 Score=27.70 Aligned_cols=26 Identities=23% Similarity=0.397 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 2 ~~~C~~--C~k~f~~~~~l~~H~~~H~~ 27 (29)
T 2lvt_A 2 PCQCVM--CGKAFTQASSLIAHVRQHTG 27 (29)
Confidence 367975 99999999999999875433
No 34
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.56 E-value=1.1 Score=29.61 Aligned_cols=26 Identities=23% Similarity=0.443 Sum_probs=21.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|.|.. |+|.|....-+..|+...|.
T Consensus 9 ~~~C~~--C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 9 LYYCSQ--CHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp EEECSS--SSCEEECHHHHHHHHHHHTC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHHcc
Confidence 589985 99999999999999555564
No 35
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=69.34 E-value=2.4 Score=25.44 Aligned_cols=23 Identities=22% Similarity=0.515 Sum_probs=20.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|++.
T Consensus 3 ~~~C~~--C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 3 PFSCSL--CPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CEECSS--SSCEESSHHHHHHHHHH
T ss_pred CccCCC--cChhhCCHHHHHHHHHH
Confidence 478975 99999999999999864
No 36
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.05 E-value=2 Score=27.76 Aligned_cols=23 Identities=22% Similarity=0.533 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|.....+..|+..
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHI--CERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTT
T ss_pred CeECCC--CCCccCCHHHHHHHHHH
Confidence 589985 99999999999999876
No 37
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.84 E-value=2.5 Score=29.55 Aligned_cols=25 Identities=24% Similarity=0.392 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
-|.|...+|+|.|....-+.+|++.
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 4899866799999999999999875
No 38
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=68.71 E-value=2.9 Score=31.80 Aligned_cols=39 Identities=21% Similarity=0.454 Sum_probs=28.3
Q ss_pred hhhhHHH-hhhhcccCcccccCCCCccccccchhHHHHHHhhh
Q 009169 289 ALDPFVR-KIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 289 ~le~~V~-k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|..+++ ....+ ..|.|...+|+|.|....-+..|++.-
T Consensus 24 ~L~~H~~~~H~~~---~~~~C~~~~C~k~f~~~~~L~~H~~~H 63 (79)
T 2dlk_A 24 YLNHHKKYQHIHQ---KSFSCPEPACGKSFNFKKHLKEHMKLH 63 (79)
T ss_dssp HHHHHHHHGGGSC---CCEECSCTTTCCEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC---CCeECCCCCCcCccCCHHHHHHHHHHh
Confidence 3445665 34444 268998777999999999999998753
No 39
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=68.63 E-value=2.5 Score=27.17 Aligned_cols=24 Identities=33% Similarity=0.811 Sum_probs=20.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 2 p~~C~~--C~k~F~~~~~L~~H~~~H 25 (33)
T 1rim_A 2 KFACPE--CPKRFMRSDHLSKHITLH 25 (33)
T ss_dssp CCCCSS--SCCCCSSHHHHHHHHHHH
T ss_pred cccCCC--CCchhCCHHHHHHHHHHh
Confidence 378975 999999999999998753
No 40
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=68.33 E-value=2 Score=27.44 Aligned_cols=25 Identities=24% Similarity=0.547 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 7 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 31 (35)
T 1srk_A 7 PFVCRI--CLSAFTTKANCARHLKVHT 31 (35)
T ss_dssp CEECSS--SCCEESSHHHHHHHHGGGT
T ss_pred CeeCCC--CCcccCCHHHHHHHHHHcC
Confidence 589985 9999999999999987643
No 41
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=67.94 E-value=2.8 Score=32.99 Aligned_cols=39 Identities=21% Similarity=0.374 Sum_probs=27.8
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
|..+++....+ ..|.|.+ |+|.|....-+.+|++.-|.+
T Consensus 52 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 90 (96)
T 2dmd_A 52 LNKHLRIHSDE---RPFKCQI--CPYASRNSSQLTVHLRSHTGD 90 (96)
T ss_dssp HHHHHHHSCCC---CCEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred HHHHHHHhCCC---CCccCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 34455544444 2588985 999999999999998876654
No 42
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=71.04 E-value=1.1 Score=27.36 Aligned_cols=26 Identities=19% Similarity=0.558 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 3 ~~~C~~--C~k~f~~~~~l~~H~~~h~~ 28 (30)
T 2lvr_A 3 PYVCIH--CQRQFADPGALQRHVRIHTG 28 (30)
Confidence 478975 99999999999999876443
No 43
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.02 E-value=1.9 Score=27.83 Aligned_cols=25 Identities=24% Similarity=0.644 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2els_A 9 IFTCEY--CNKVFKFKHSLQAHLRIHT 33 (36)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHHC
T ss_pred CEECCC--CCceeCCHHHHHHHHHHhC
Confidence 689985 9999999999999987633
No 44
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.82 E-value=3.3 Score=34.07 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=28.0
Q ss_pred cccccCCCCcccccc-------chhHHHHHHhhhChHHHHHH
Q 009169 304 WKYGCGAKGCTKLFH-------AAEFVHKHLKLKHPELVIEL 338 (541)
Q Consensus 304 ~K~~C~~~~CtKlFK-------g~eFV~KHI~nKH~E~v~~~ 338 (541)
.+..|.+ |.|.|. |..=+..||..+|++.++..
T Consensus 27 ~~A~Ck~--C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~~~ 66 (76)
T 2djr_A 27 QYATCRL--CGRQVSRGPGVNVGTTALWKHLKSMHREELEKS 66 (76)
T ss_dssp SCEEESS--SCCBCCCCSSCCSSSCHHHHHHHHTTHHHHHHT
T ss_pred CEEECCC--CCCccCCCCCCCCchHHHHHHHHHHCHHHHHhc
Confidence 3789985 999998 67889999999999977653
No 45
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=66.45 E-value=3.1 Score=24.92 Aligned_cols=25 Identities=24% Similarity=0.576 Sum_probs=20.5
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|....|+|.|....-+..|+..
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHH
Confidence 3678734599999999999999875
No 46
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=66.40 E-value=1.7 Score=26.11 Aligned_cols=23 Identities=26% Similarity=0.665 Sum_probs=20.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 2 ~~~C~~--C~k~f~~~~~l~~H~~~ 24 (29)
T 2m0f_A 2 PLKCRE--CGKQFTTSGNLKRHLRI 24 (29)
T ss_dssp CEECTT--TSCEESCHHHHHHHHHH
T ss_pred CccCCC--CCCccCChhHHHHHHHH
Confidence 378975 99999999999999876
No 47
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=66.32 E-value=3.2 Score=35.67 Aligned_cols=40 Identities=30% Similarity=0.454 Sum_probs=29.3
Q ss_pred hhhHH-HhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 009169 290 LDPFV-RKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 290 le~~V-~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
|..++ +..+.+ ..|.|.+.+|+|.|....-+.+|+++.|+
T Consensus 115 L~~H~~~~H~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~hhg 155 (155)
T 2gli_A 115 RAKHQNRTHSNE---KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155 (155)
T ss_dssp THHHHHHTTCSC---CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred HHHHHHHhcCCC---CCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence 44455 333333 26899877799999999999999988774
No 48
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.64 E-value=3.9 Score=27.90 Aligned_cols=26 Identities=27% Similarity=0.533 Sum_probs=22.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|.|.. |+|.|....-+..|++..|.
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~~H~ 37 (47)
T 2epx_A 12 PYECIE--CGKAFIQNTSLIRHWRYYHT 37 (47)
T ss_dssp SBCCSS--SCCCBSSHHHHHHHHTTTTT
T ss_pred CEECCc--cCchhCChHHHHHHhHhhcC
Confidence 589985 99999999999999984553
No 49
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=65.64 E-value=3.8 Score=31.82 Aligned_cols=27 Identities=22% Similarity=0.298 Sum_probs=23.0
Q ss_pred cccCCCCccccccchhHHHHHHhhhCh
Q 009169 306 YGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 306 ~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
+.|.-.+|+|.|..++.+.+||.+.|-
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv 28 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHV 28 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhcc
Confidence 467777899999999999999987774
No 50
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.41 E-value=3.1 Score=28.40 Aligned_cols=25 Identities=28% Similarity=0.632 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep1_A 12 PYECSD--CGKSFIKKSQLHVHQRIHT 36 (46)
T ss_dssp SSCCSS--SCCCCSSHHHHHHHHGGGS
T ss_pred CcCCCC--CCchhCCHHHHHHHHHHhC
Confidence 689985 9999999999999998643
No 51
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=65.38 E-value=4 Score=30.62 Aligned_cols=34 Identities=26% Similarity=0.596 Sum_probs=22.2
Q ss_pred hHHHhhhhcccCcccccCCCCccccccchhHHHHHHh
Q 009169 292 PFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLK 328 (541)
Q Consensus 292 ~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~ 328 (541)
.+++..+.++ .|.|.+..|+|.|....-+.+|++
T Consensus 37 ~H~~~H~~~~---~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 37 AHTRTHTGEK---PFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp HHHHHHSSSC---SEECCCTTCCCEESSHHHHHHHTT
T ss_pred HHHHhcCCCC---CccCCCCCCCcccCCHHHHHhHhh
Confidence 3444444442 578865568888888888888875
No 52
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.36 E-value=2.5 Score=27.22 Aligned_cols=24 Identities=13% Similarity=0.396 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H 32 (36)
T 2elq_A 9 PFKCSL--CEYATRSKSNLKAHMNRH 32 (36)
T ss_dssp SEECSS--SSCEESCHHHHHHHHHHS
T ss_pred CccCCC--CCchhCCHHHHHHHHHHh
Confidence 589985 999999999999998763
No 53
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=65.29 E-value=2.8 Score=32.06 Aligned_cols=38 Identities=24% Similarity=0.391 Sum_probs=27.2
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
|..+++....+ -.|.|.+ |+|.|....-+..|+..-+.
T Consensus 34 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~L~~H~~~H~~ 71 (77)
T 2cot_A 34 LSKHRRTHTGE---KPYKCDE--CGKAFIQRSHLIGHHRVHTG 71 (77)
T ss_dssp HHHHHTTTCCS---CSEECSS--SCCEESSHHHHHHHGGGSCC
T ss_pred HHHHHHHcCCC---cCeeCCC--CCCccCCHHHHHHHHHHhCC
Confidence 34455544444 2589985 99999999999999976444
No 54
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.27 E-value=2.8 Score=28.27 Aligned_cols=23 Identities=26% Similarity=0.658 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (44)
T 2en7_A 12 PYVCNE--CGKAFRSKSYLIIHTRT 34 (44)
T ss_dssp SSCCTT--TCCCCSSHHHHHHHHTT
T ss_pred CeECCC--CCCccCCHHHHHHHhhh
Confidence 589986 99999999999999975
No 55
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.26 E-value=2.2 Score=27.35 Aligned_cols=24 Identities=21% Similarity=0.419 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H 32 (36)
T 2elt_A 9 PYKCPQ--CSYASAIKANLNVHLRKH 32 (36)
T ss_dssp SEECSS--SSCEESSHHHHHHHHHHH
T ss_pred CCCCCC--CCcccCCHHHHHHHHHHc
Confidence 589985 999999999999998753
No 56
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=65.17 E-value=3.1 Score=24.96 Aligned_cols=23 Identities=26% Similarity=0.676 Sum_probs=20.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 3 ~~~C~~--C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 3 PYSCSV--CGKRFSLKHQMETHYRV 25 (28)
T ss_dssp SEECSS--SCCEESCHHHHHHHHTT
T ss_pred CccCCC--CCcccCCHHHHHHHHHh
Confidence 478975 99999999999999875
No 57
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=65.16 E-value=3.4 Score=33.97 Aligned_cols=38 Identities=16% Similarity=0.317 Sum_probs=28.6
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
|..+++.. .| -.|.|.. |+|.|....-+.+||...|.+
T Consensus 51 L~~H~~~h-~~---k~~~C~~--Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 51 LKKHMENC-KQ---EMFTCHH--CGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp HHHHHHHH-CC---CCCCCSS--SCCCCSSHHHHHHHHHHHTCC
T ss_pred HHHHHHHH-CC---CCeECCC--CCCeeCCHHHHHHHhHHhcCC
Confidence 44466554 33 3689986 999999999999997777753
No 58
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=65.11 E-value=2 Score=30.17 Aligned_cols=26 Identities=27% Similarity=0.579 Sum_probs=22.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.+..|+|.|....-+..|+..-
T Consensus 18 ~~~C~~~~C~k~F~~~~~L~~H~~~H 43 (47)
T 1ncs_A 18 TFECLFPGCTKTFKRRYNIRSHIQTH 43 (47)
T ss_dssp EEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred CeECCCCCCCCccCCHHHHHHHHHHc
Confidence 68997557999999999999998763
No 59
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=64.92 E-value=4.7 Score=32.90 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=27.5
Q ss_pred cccccCCCCcccccc---chhHHHHHHhhhChHHHHHHH
Q 009169 304 WKYGCGAKGCTKLFH---AAEFVHKHLKLKHPELVIELT 339 (541)
Q Consensus 304 ~K~~C~~~~CtKlFK---g~eFV~KHI~nKH~E~v~~~~ 339 (541)
.+..|.+ |.|.++ +..=+..||+.||++.+.++.
T Consensus 28 ~~a~Ck~--C~~~l~~~g~TSnL~rHL~~~H~~e~~~~~ 64 (73)
T 2ct5_A 28 KKIYCRI--CMAQIAYSGNTSNLSYHLEKNHPEEFCEFV 64 (73)
T ss_dssp SCCEETT--TTEECCCCSSTHHHHHHHHHSCHHHHHHHC
T ss_pred CEEECCC--CCccccCCCChHhHHHHHHHHCHHHHHHHH
Confidence 3678985 999975 466689999999999888754
No 60
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.70 E-value=2.8 Score=28.87 Aligned_cols=25 Identities=24% Similarity=0.485 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|++.-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2eom_A 12 GHRCSD--CGKFFLQASNFIQHRRIHT 36 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHHHS
T ss_pred CcCCCC--CCCeeCChHHHHHHHHHhC
Confidence 689985 9999999999999987633
No 61
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=64.48 E-value=4.4 Score=33.47 Aligned_cols=42 Identities=24% Similarity=0.391 Sum_probs=29.6
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChHH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 334 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E~ 334 (541)
|..+++....+ -.|.|++..|+|.|....-+.+|++.-+.++
T Consensus 80 l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k 121 (124)
T 1ubd_C 80 LRTHVRIHTGD---RPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121 (124)
T ss_dssp HHHHHHHHHCC---CCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred HHHHHHHhCCC---CceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence 34455554444 2699976679999999999999999866653
No 62
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=64.41 E-value=5.1 Score=30.96 Aligned_cols=39 Identities=21% Similarity=0.458 Sum_probs=27.2
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
|..+++....+ ..|.|.+ |+|.|....-+.+|++.-+.+
T Consensus 50 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~H~~~ 88 (90)
T 1a1h_A 50 LTTHIRTHTGE---KPFACDI--CGRKFARSDERKRHTKIHLRQ 88 (90)
T ss_dssp HHHHHHHHHCC---CCEECTT--TCCEESSHHHHHHHHGGGGC-
T ss_pred HHHHHHHcCCC---CCccCCC--CCchhCCHHHHHHHHHHhccc
Confidence 34455544444 2689985 999999999999999875544
No 63
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.05 E-value=2.7 Score=28.81 Aligned_cols=25 Identities=24% Similarity=0.606 Sum_probs=21.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|++.-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emi_A 12 HYECSE--CGKAFIQKSTLSMHQRIHR 36 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHGGGC
T ss_pred CCCCCC--CCcccCCHHHHHHHHhHhC
Confidence 689985 9999999999999987643
No 64
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.86 E-value=3.6 Score=31.23 Aligned_cols=28 Identities=25% Similarity=0.674 Sum_probs=25.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|.|....|+|.|....-+..|+...|.
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 34 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHI 34 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGG
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhC
Confidence 6899888899999999999999987674
No 65
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.54 E-value=2.5 Score=28.16 Aligned_cols=24 Identities=25% Similarity=0.548 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~H 33 (41)
T 2ept_A 10 VYECQE--CGKSFRQKGSLTLHERIH 33 (41)
T ss_dssp CEECSS--SCCEESSHHHHHHHGGGC
T ss_pred CeECCC--CCCCcCCHHHHHHHHHHh
Confidence 589985 999999999999998753
No 66
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.47 E-value=3.2 Score=28.40 Aligned_cols=24 Identities=25% Similarity=0.664 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eq2_A 12 PYQCNE--CGKAFSQTSKLARHQRVH 35 (46)
T ss_dssp SSSCCS--SCCCCSSHHHHHHHGGGG
T ss_pred CeECCC--CCcccCCHHHHHHHHHHc
Confidence 689985 999999999999998763
No 67
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=62.98 E-value=2.8 Score=31.52 Aligned_cols=28 Identities=18% Similarity=0.422 Sum_probs=24.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|.|...+|+|.|.....+..|+..-+.
T Consensus 17 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 44 (72)
T 2epa_A 17 SHICSHPGCGKTYFKSSHLKAHTRTHTG 44 (72)
T ss_dssp CEECSSTTTCCEESSHHHHHHHHHHHSS
T ss_pred ceeCCCCCCccccCCHHHHHHHHHhcCC
Confidence 7899877899999999999999976443
No 68
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=62.85 E-value=5 Score=32.55 Aligned_cols=41 Identities=17% Similarity=0.241 Sum_probs=29.9
Q ss_pred hhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChHHHH
Q 009169 291 DPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVI 336 (541)
Q Consensus 291 e~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E~v~ 336 (541)
..+++....+ ..|.|.. |+|.|....-+.+|++.-|...-.
T Consensus 54 ~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~ 94 (110)
T 2csh_A 54 VGHMKIHTGI---KPYECNI--CAKRFMWRDSFHRHVTSCTKSYEA 94 (110)
T ss_dssp HHHHTTTCCC---CCEECSS--SCCEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCC---CCeeCCC--CcchhcCHHHHHHHHHHccccccc
Confidence 3354443333 2689986 999999999999999987765443
No 69
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.83 E-value=3.1 Score=28.43 Aligned_cols=24 Identities=29% Similarity=0.617 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eq1_A 12 PYKCNE--CGKAFRAHSNLTTHQVIH 35 (46)
T ss_dssp CCCCTT--TTCCCSSHHHHHHHHTTT
T ss_pred CeECCc--CChhhCCHHHHHHHHHHh
Confidence 689985 999999999999998753
No 70
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.76 E-value=3.2 Score=28.41 Aligned_cols=24 Identities=25% Similarity=0.530 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2emg_A 12 PFICSE--CGKVFTHKTNLIIHQKIH 35 (46)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHTTT
T ss_pred CEECCc--cCcccCCHHHHHHHHHHh
Confidence 589985 999999999999998763
No 71
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.55 E-value=3.9 Score=27.74 Aligned_cols=26 Identities=19% Similarity=0.443 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 35 (43)
T 2yrm_A 10 AFFCNE--CDCRFSEEASLKRHTLQTHS 35 (43)
T ss_dssp CBCCSS--SCCCBSSHHHHHHHHHHHTC
T ss_pred CEECCC--CCCeeCChHHHHHHHHhhCC
Confidence 589985 99999999999999876433
No 72
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.19 E-value=2.4 Score=28.99 Aligned_cols=24 Identities=25% Similarity=0.569 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|++.-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (45)
T 2epu_A 12 PFECTH--CGKSFRAKGNLVTHQRIH 35 (45)
T ss_dssp SEEETT--TTEEESSHHHHHHHHTTT
T ss_pred CccCCC--CCCccCChHHHHHHHHHh
Confidence 589986 999999999999998763
No 73
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.99 E-value=3.8 Score=28.01 Aligned_cols=24 Identities=25% Similarity=0.671 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2enf_A 12 PYKCNE--CGKVFTQNSHLVRHRGIH 35 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHHTTT
T ss_pred CeECCC--CCcccCCHHHHHHHHHhh
Confidence 689985 999999999999998753
No 74
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.91 E-value=4 Score=27.97 Aligned_cols=24 Identities=25% Similarity=0.685 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2yth_A 12 PFQCEE--CGKRFTQNSHLHSHQRVH 35 (46)
T ss_dssp SBCCSS--SCCCBSSHHHHHHHGGGG
T ss_pred CCCCCC--CCcccCCHHHHHHHHHhc
Confidence 589985 999999999999998763
No 75
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.83 E-value=3.3 Score=28.37 Aligned_cols=24 Identities=25% Similarity=0.643 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|++.-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2enh_A 12 PYECDV--CRKAFSHHASLTQHQRVH 35 (46)
T ss_dssp SCBCTT--TCCBCSSSHHHHHHGGGS
T ss_pred CcCCCC--cCchhCCHHHHHHHHHHh
Confidence 689985 999999999999998763
No 76
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.71 E-value=2.5 Score=29.06 Aligned_cols=25 Identities=28% Similarity=0.748 Sum_probs=21.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eoz_A 12 PYSCNV--CGKAFVLSAHLNQHLRVHT 36 (46)
T ss_dssp SEEETT--TTEEESSHHHHHHHHHHHS
T ss_pred CeECcc--cChhhCCHHHHHHHHHHhC
Confidence 699986 9999999999999987643
No 77
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.65 E-value=3.5 Score=28.25 Aligned_cols=24 Identities=21% Similarity=0.592 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|.....+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2en9_A 12 LFKCNE--CKKTFTQSSSLTVHQRIH 35 (46)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHHH
T ss_pred CEECCc--cCcccCCHHHHHHHHHHc
Confidence 589986 999999999999998753
No 78
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=61.33 E-value=3.2 Score=31.69 Aligned_cols=27 Identities=30% Similarity=0.557 Sum_probs=24.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|.|.. |+|.|....-+..|+...|.+
T Consensus 15 ~~~C~~--C~k~f~~~~~L~~H~~~~h~~ 41 (77)
T 2ct1_A 15 PYECYI--CHARFTQSGTMKMHILQKHTE 41 (77)
T ss_dssp SEECTT--TCCEESCHHHHHHHHHHHSSS
T ss_pred CeECCC--cCchhCCHHHHHHHHHHhcCC
Confidence 599986 999999999999999988864
No 79
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.23 E-value=3.8 Score=27.93 Aligned_cols=24 Identities=25% Similarity=0.677 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytr_A 12 PYKCNE--CGKAFSQTSKLARHQRIH 35 (46)
T ss_dssp TTCCTT--TCCCCSSHHHHHHHHTTT
T ss_pred CcCCCC--CCCccCCHHHHHHHHHhc
Confidence 689985 999999999999998763
No 80
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.04 E-value=3.9 Score=27.86 Aligned_cols=23 Identities=22% Similarity=0.407 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eop_A 12 PHECRE--CGKSFSFNSQLIVHQRI 34 (46)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHTT
T ss_pred CeeCCC--CCchhCCHHHHHHHHHH
Confidence 689986 99999999999999876
No 81
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.95 E-value=3.5 Score=28.28 Aligned_cols=23 Identities=26% Similarity=0.664 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|.....+.+|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoh_A 12 PYECKE--CRKTFIQIGHLNQHKRV 34 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHH
T ss_pred CcCCCC--cCchhCCHHHHHHHHHH
Confidence 589985 99999999999999875
No 82
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=60.90 E-value=3.3 Score=27.67 Aligned_cols=25 Identities=24% Similarity=0.578 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 34 (42)
T 2el5_A 10 PYECSE--CGKAFNRKDQLISHQRTHA 34 (42)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGGC
T ss_pred CccCCC--cChhhCCHHHHHHHHHhcC
Confidence 589985 9999999999999997643
No 83
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=60.82 E-value=9 Score=29.90 Aligned_cols=40 Identities=20% Similarity=0.419 Sum_probs=30.8
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChHH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 334 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E~ 334 (541)
|..+++....+ ..|.|.. |+|.|....-+..|+...|...
T Consensus 19 L~~H~~~H~~~---~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~ 58 (88)
T 1llm_C 19 LTTHIRTHTGE---KPFACDI--CGRKFARSDERKRHRDIQHILP 58 (88)
T ss_dssp HHHHHHHHHCC---CCEECTT--TCCEESSHHHHHHHHHHHTHHH
T ss_pred HHHHHHHcCCC---CCccCCC--CCCccCCHHHHHHHHHHhCCCc
Confidence 44455554444 2699985 9999999999999999999643
No 84
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.77 E-value=3.5 Score=27.60 Aligned_cols=25 Identities=24% Similarity=0.630 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 11 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 35 (42)
T 2eos_A 11 PYPCEI--CGTRFRHLQTLKSHLRIHT 35 (42)
T ss_dssp CBCCSS--SCCCBSSHHHHHHHTTTTS
T ss_pred CEECCC--CCCccCCHHHHHHHHHhcC
Confidence 589985 9999999999999987643
No 85
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.71 E-value=3.9 Score=27.92 Aligned_cols=24 Identities=21% Similarity=0.499 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2epz_A 12 PFDCID--CGKAFSDHIGLNQHRRIH 35 (46)
T ss_dssp SBCCTT--TCCCBSSHHHHHHHHTTT
T ss_pred CeECCC--CCceeCCHHHHHHHHHHh
Confidence 689985 999999999999998753
No 86
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.71 E-value=2.9 Score=28.66 Aligned_cols=24 Identities=25% Similarity=0.609 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|.....+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2ytp_A 12 HYECSE--CGKAFARKSTLIMHQRIH 35 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTTT
T ss_pred CeECCc--CCcccCCHHHHHHHHHHh
Confidence 589985 999999999999998763
No 87
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.62 E-value=5.1 Score=32.44 Aligned_cols=35 Identities=17% Similarity=0.328 Sum_probs=26.4
Q ss_pred HHHhhhhcccCcccccCCCCcccccc-chhHHHHHHhhhCh
Q 009169 293 FVRKIRDEKYGWKYGCGAKGCTKLFH-AAEFVHKHLKLKHP 332 (541)
Q Consensus 293 ~V~k~~dE~~g~K~~C~~~~CtKlFK-g~eFV~KHI~nKH~ 332 (541)
+.+..+.+ -.|.|.. |+|.|. ...-+..|++.-|.
T Consensus 15 h~~~h~~~---~~~~C~~--C~k~f~~~~~~L~~H~~~h~~ 50 (98)
T 2gqj_A 15 WQRAIHER---GEAVCPT--CNVVTRKTLVGLKKHMEVCQK 50 (98)
T ss_dssp HHHTTTTT---SCCCCTT--TCCCCSSCSHHHHHHHHHHHH
T ss_pred HHHHhccC---CCcCCCC--CCCChhhhHHHHHHHHHHHcC
Confidence 44444444 2799985 999999 99999999977554
No 88
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.61 E-value=3.1 Score=28.38 Aligned_cols=25 Identities=20% Similarity=0.515 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytf_A 12 PFECSE--CQKAFNTKSNLIVHQRTHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHTSC
T ss_pred CcCCCC--CCcccCCHHHHHHHHHHhC
Confidence 689985 9999999999999987633
No 89
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.49 E-value=3.3 Score=28.34 Aligned_cols=24 Identities=29% Similarity=0.643 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep3_A 12 PYRCAE--CGKAFTDRSNLFTHQKIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTTT
T ss_pred CeECCC--CCchhCCHHHHHHHHHHc
Confidence 589985 999999999999999763
No 90
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.45 E-value=3.8 Score=27.92 Aligned_cols=24 Identities=38% Similarity=0.679 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eq4_A 12 LYNCKE--CGKSFSRAPCLLKHERLH 35 (46)
T ss_dssp CCCBTT--TTBCCSCHHHHHHHHHHC
T ss_pred CeECCC--CCCccCchHHHHHHHHhc
Confidence 589985 999999999999998763
No 91
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=60.15 E-value=3.8 Score=28.05 Aligned_cols=24 Identities=25% Similarity=0.650 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2emk_A 12 PYECKE--CGKAFSQTTHLIQHQRVH 35 (46)
T ss_dssp SCBCSS--SCCBCSCHHHHHHHHHHH
T ss_pred ceECCC--CCchhCCHHHHHHHHHHc
Confidence 589985 999999999999999763
No 92
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.13 E-value=4 Score=27.98 Aligned_cols=23 Identities=26% Similarity=0.670 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2em6_A 12 CYKCDV--CGKEFSQSSHLQTHQRV 34 (46)
T ss_dssp CCBCSS--SCCBCSSHHHHHHHHTT
T ss_pred CeECCC--CCcccCCHHHHHHHHHH
Confidence 589985 99999999999999875
No 93
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.08 E-value=4 Score=27.14 Aligned_cols=23 Identities=26% Similarity=0.677 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~ 32 (42)
T 2yte_A 10 PYSCAE--CKETFSDNNRLVQHQKM 32 (42)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHHH
T ss_pred CeECCC--CCCccCCHHHHHHHHHH
Confidence 589985 99999999999999876
No 94
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.00 E-value=3.6 Score=27.98 Aligned_cols=24 Identities=25% Similarity=0.512 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (44)
T 2epv_A 12 PYECNE--CGKAFIWKSLLIVHERTH 35 (44)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGG
T ss_pred CeECCC--CCcccCchHHHHHHHhHh
Confidence 589985 999999999999998763
No 95
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.99 E-value=3.1 Score=28.34 Aligned_cols=24 Identities=29% Similarity=0.732 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2yrj_A 12 PYRCGE--CGKAFAQKANLTQHQRIH 35 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTTT
T ss_pred CeECCC--CCCccCCHHHHHHHHHHc
Confidence 689985 999999999999998753
No 96
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=59.81 E-value=3.2 Score=27.37 Aligned_cols=25 Identities=24% Similarity=0.671 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 6 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 30 (39)
T 1njq_A 6 SYTCSF--CKREFRSAQALGGHMNVHR 30 (39)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHTTC
T ss_pred ceECCC--CCcccCCHHHHHHHHHHcC
Confidence 589985 9999999999999987633
No 97
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.68 E-value=3.3 Score=28.43 Aligned_cols=23 Identities=26% Similarity=0.537 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|++.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytt_A 12 PYQCSE--CGKSFSGSYRLTQHWIT 34 (46)
T ss_dssp TTCCSS--SCCCCSSHHHHHHHHTH
T ss_pred CeeCCC--CCcccCCHHHHHHHHHH
Confidence 689985 99999999999999876
No 98
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=59.59 E-value=7.1 Score=29.21 Aligned_cols=23 Identities=17% Similarity=0.660 Sum_probs=17.2
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|++.
T Consensus 49 ~~~C~~--C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 49 PFQCRI--CMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CEECTT--TCCEESCHHHHHHHHTT
T ss_pred CeECCC--CCchhCCHHHHHHHHHh
Confidence 577875 88888888888888754
No 99
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.37 E-value=4.1 Score=27.74 Aligned_cols=25 Identities=28% Similarity=0.475 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+.+|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eov_A 12 PYKCSD--CGKSFTWKSRLRIHQKCHT 36 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHHHHHS
T ss_pred CccCCc--cChhhCCHHHHHHHHHhcC
Confidence 589985 9999999999999987533
No 100
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.28 E-value=3.7 Score=28.24 Aligned_cols=23 Identities=26% Similarity=0.657 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eon_A 12 PYKCQV--CGKAFRVSSHLVQHHSV 34 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHTTT
T ss_pred ccCCCC--CCcccCcHHHHHHHHHh
Confidence 689986 99999999999999875
No 101
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.18 E-value=3.5 Score=28.28 Aligned_cols=25 Identities=24% Similarity=0.434 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em4_A 12 PYECIE--CGKAFKTKSSLICHRRSHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHS
T ss_pred CcCCCC--CCCccCCHHHHHHHHHhcC
Confidence 589985 9999999999999987633
No 102
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.99 E-value=4.1 Score=27.82 Aligned_cols=23 Identities=26% Similarity=0.709 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2yti_A 12 PYKCNE--CGKVFTQNSHLARHRGI 34 (46)
T ss_dssp TTCCSS--SCCCCSSHHHHHHHHTT
T ss_pred CeECCC--CCcccCChhHHHHHhHh
Confidence 689985 99999999999999875
No 103
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=58.99 E-value=6.9 Score=29.86 Aligned_cols=37 Identities=30% Similarity=0.478 Sum_probs=29.0
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
|..+++..+.|+ .|.|.. |+|.|....-+.+|++. |.
T Consensus 20 L~~H~~~Ht~ek---p~~C~~--C~k~F~~~~~L~~H~~~-Ht 56 (60)
T 4gzn_C 20 LSRHRRAHLGYR---PRSCPE--CGKCFRDQSEVNRHLKV-HQ 56 (60)
T ss_dssp HHHHHHHHHTCC---CEECTT--TCCEESSHHHHHHHGGG-GS
T ss_pred HHHHHHHhCCCc---CeECCC--CCCCcCCHHHHHHHhCc-cC
Confidence 445666666664 699985 99999999999999875 53
No 104
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.99 E-value=4.1 Score=27.88 Aligned_cols=23 Identities=30% Similarity=0.849 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytq_A 12 PYGCSE--CGKAFSSKSYLIIHMRT 34 (46)
T ss_dssp SCBCSS--SCCBCSCHHHHHHHHTT
T ss_pred CcCCCc--cChhhCChHHHHHHHHH
Confidence 689985 99999999999999876
No 105
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=58.84 E-value=3.8 Score=29.37 Aligned_cols=26 Identities=23% Similarity=0.529 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 24 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 49 (54)
T 1yui_A 24 PATCPI--CYAVIRQSRNLRRHLELRHF 49 (54)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHHTT
T ss_pred CccCCC--CCcccCCHHHHHHHHHHhcc
Confidence 689985 99999999999999876443
No 106
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.83 E-value=3 Score=28.42 Aligned_cols=23 Identities=26% Similarity=0.618 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eq3_A 12 PYECNQ--CGKAFSVRSSLTTHQAI 34 (46)
T ss_dssp SSEETT--TTEECSSHHHHHHHHTT
T ss_pred CeECCC--CChhhCCHHHHHHHHHH
Confidence 689985 99999999999999875
No 107
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.74 E-value=3.7 Score=28.14 Aligned_cols=25 Identities=24% Similarity=0.565 Sum_probs=21.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|++.-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emf_A 12 HFECTE--CGKAFTRKSTLSMHQKIHT 36 (46)
T ss_dssp CEECSS--SCCEESCHHHHHHHGGGTS
T ss_pred CeECCC--CCchhCCHHHHHHHHHHhC
Confidence 599985 9999999999999998633
No 108
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.69 E-value=4.4 Score=27.43 Aligned_cols=23 Identities=26% Similarity=0.626 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|++.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (44)
T 2eou_A 12 TSECQE--CGKIFRHSSLLIEHQAL 34 (44)
T ss_dssp CCCCTT--TCCCCSSHHHHHHHHHH
T ss_pred CeECCC--CCcccCCHHHHHHHHHH
Confidence 589985 99999999999999876
No 109
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=58.66 E-value=8.6 Score=30.27 Aligned_cols=34 Identities=26% Similarity=0.585 Sum_probs=24.9
Q ss_pred hhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhh
Q 009169 291 DPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 291 e~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
..+++....++ .|.|.+ |+|.|....-+.+|++.
T Consensus 64 ~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~ 97 (100)
T 2ebt_A 64 TRHYRKHTGAK---PFQCGV--CNRSFSRSDHLALHMKR 97 (100)
T ss_dssp HHHHHHHTSCC---SCBCSS--SCCBCSSHHHHHHHHHH
T ss_pred HHHHHHhCCCC---CeECCC--CcCccCCHHHHHHHHHH
Confidence 33554444442 589986 99999999999999875
No 110
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=58.65 E-value=3.4 Score=27.50 Aligned_cols=23 Identities=30% Similarity=0.563 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 11 ~~~C~~--C~k~f~~~~~l~~H~~~ 33 (42)
T 2epc_A 11 PYLCGQ--CGKSFTQRGSLAVHQRS 33 (42)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHH
T ss_pred CeECCC--CCcccCCHHHHHHHhhh
Confidence 589985 99999999999999875
No 111
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=58.60 E-value=4.8 Score=27.45 Aligned_cols=23 Identities=22% Similarity=0.521 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2em0_A 12 TWKCRE--CDMCFSQASSLRLHQNV 34 (46)
T ss_dssp CCCCSS--SCCCCSSHHHHHHHGGG
T ss_pred CeECCC--CCcccCCHHHHHHHHHH
Confidence 589985 99999999999999876
No 112
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.53 E-value=3.3 Score=28.28 Aligned_cols=24 Identities=29% Similarity=0.657 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2em3_A 12 PYECKV--CSKAFTQKAHLAQHQKTH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHH
T ss_pred CeECCC--CCcccCCHHHHHHHHHHh
Confidence 689986 999999999999999763
No 113
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.43 E-value=3.9 Score=27.94 Aligned_cols=25 Identities=24% Similarity=0.604 Sum_probs=21.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eml_A 12 PYECSV--CGKAFSHRQSLSVHQRIHS 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGGS
T ss_pred CeeCCC--cCCccCCHHHHHHHHHHhc
Confidence 689986 9999999999999987633
No 114
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.42 E-value=4.4 Score=27.64 Aligned_cols=24 Identities=25% Similarity=0.688 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2ytn_A 12 PYKCNE--CGKVFTQNSHLARHRGIH 35 (46)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHGGGT
T ss_pred CeECCC--CCCeeCCHHHHHHHhhhc
Confidence 589985 999999999999998763
No 115
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=58.33 E-value=4.9 Score=28.80 Aligned_cols=26 Identities=31% Similarity=0.632 Sum_probs=22.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|.|.. |+|.|....-+..|++..|.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~~H~ 37 (54)
T 2eps_A 12 PYICQS--CGKGFSRPDHLNGHIKQVHT 37 (54)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHTSC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHhcC
Confidence 589985 99999999999999986664
No 116
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.27 E-value=3.9 Score=27.49 Aligned_cols=23 Identities=26% Similarity=0.608 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (44)
T 2eof_A 12 PYECNE--CQKAFNTKSNLMVHQRT 34 (44)
T ss_dssp SEECTT--TCCEESCHHHHHHHHHH
T ss_pred CeECCC--CCcccCCHhHHHHHHHH
Confidence 589985 99999999999999876
No 117
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=58.19 E-value=8.5 Score=29.02 Aligned_cols=35 Identities=17% Similarity=0.202 Sum_probs=22.9
Q ss_pred hhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhh
Q 009169 291 DPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 291 e~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
..+++....+ ..|.|.. |+|.|....-+.+|++.-
T Consensus 46 ~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~H 80 (82)
T 2kmk_A 46 KKHTFIHTGE---KPHKCQV--CGKAFSQSSNLITHSRKH 80 (82)
T ss_dssp HHHHHHHHTC---CCEECTT--TSCEESSHHHHHHHHHHH
T ss_pred HHHHHHhcCC---CCCcCCC--cchhhCChHHHHHHHHhh
Confidence 3444444443 2578875 888888888888887653
No 118
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=58.03 E-value=7.1 Score=29.60 Aligned_cols=25 Identities=32% Similarity=0.693 Sum_probs=16.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|...+|+|.|....-+..|+..
T Consensus 31 ~~~C~~~~C~~~f~~~~~l~~H~~~ 55 (85)
T 2j7j_A 31 PYECPHEGCDKRFSLPSRLKRHEKV 55 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHH
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHH
Confidence 4677655577777777777777654
No 119
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=57.79 E-value=3.9 Score=28.03 Aligned_cols=23 Identities=22% Similarity=0.622 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2emj_A 12 PFECAE--CGKSFSISSQLATHQRI 34 (46)
T ss_dssp SEECSS--SSCEESSHHHHHHHHHH
T ss_pred CEECCC--CCcccCCHHHHHHHHHH
Confidence 689985 99999999999999876
No 120
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.75 E-value=3.6 Score=28.01 Aligned_cols=24 Identities=29% Similarity=0.548 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eow_A 12 PYKCNE--CGKAFRARSSLAIHQATH 35 (46)
T ss_dssp CEECTT--SCCEESSHHHHHHHHHHH
T ss_pred Ceeccc--cCChhcCHHHHHHHHHHc
Confidence 589986 999999999999998763
No 121
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.47 E-value=3.7 Score=28.13 Aligned_cols=23 Identities=17% Similarity=0.512 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2em5_A 12 SHQCHE--CGRGFTLKSHLNQHQRI 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTT
T ss_pred CeECCc--CCCccCCHHHHHHHHHH
Confidence 689986 99999999999999876
No 122
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.45 E-value=3.9 Score=27.90 Aligned_cols=24 Identities=25% Similarity=0.494 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2emy_A 12 PYECHE--CGKAFSRKYQLISHQRTH 35 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHH
T ss_pred CcCCCC--CCcccCcHHHHHHHHHHc
Confidence 589985 999999999999998763
No 123
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.43 E-value=6 Score=27.08 Aligned_cols=23 Identities=30% Similarity=0.598 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|++.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytm_A 12 PYKCME--CGKAFGDNSSCTQHQRL 34 (46)
T ss_dssp SSSBTT--TTBCCSSHHHHHHHHHH
T ss_pred CcCCCC--CCchhCCHHHHHHHHHH
Confidence 689985 99999999999999875
No 124
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.33 E-value=4.2 Score=27.75 Aligned_cols=24 Identities=25% Similarity=0.437 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2em7_A 12 PYKCEE--CGKGFICRRDLYTHHMVH 35 (46)
T ss_dssp SEECSS--SCCEESCHHHHHHHGGGG
T ss_pred CccCCC--ccchhCCHHHHHHHHHHh
Confidence 689985 999999999999998763
No 125
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.24 E-value=3.9 Score=27.83 Aligned_cols=23 Identities=26% Similarity=0.658 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2yts_A 12 PYICNE--CGKSFIQKSHLNRHRRI 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHGGG
T ss_pred CEECCC--CChhhCChHHHHHHHHh
Confidence 689985 99999999999999875
No 126
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=61.96 E-value=2.2 Score=25.37 Aligned_cols=23 Identities=26% Similarity=0.585 Sum_probs=19.4
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|++.
T Consensus 2 p~~C~~--C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 2 PYVCER--CGKRFVQSSQLANHIRH 24 (26)
Confidence 368975 99999999999999864
No 127
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.18 E-value=3.2 Score=27.63 Aligned_cols=24 Identities=25% Similarity=0.617 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 11 ~~~C~~--C~k~f~~~~~L~~H~~~H 34 (42)
T 2ytb_A 11 PYRCDQ--CGKAFSQKGSLIVHIRVH 34 (42)
T ss_dssp SBCCTT--TTCCBSSHHHHHTTGGGT
T ss_pred CeeCCC--ccchhCCHHHHHHHHHHh
Confidence 589985 999999999999998753
No 128
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.04 E-value=3.7 Score=27.96 Aligned_cols=24 Identities=21% Similarity=0.510 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2emm_A 12 PHKCNE--CGKSFIQSAHLIQHQRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHH
T ss_pred CeeCCC--CChhhCCHHHHHHHHHHh
Confidence 689985 999999999999998763
No 129
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=57.01 E-value=3.9 Score=27.86 Aligned_cols=23 Identities=30% Similarity=0.655 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2el4_A 12 PYGCSQ--CAKTFSLKSQLIVHQRS 34 (46)
T ss_dssp SEECSS--SSCEESSHHHHHHHGGG
T ss_pred ceECCC--CCchhCCHHHHHHHHHH
Confidence 589985 99999999999999876
No 130
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=56.87 E-value=6.7 Score=32.20 Aligned_cols=28 Identities=25% Similarity=0.491 Sum_probs=24.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
-|.|...+|+|-|.-..-+..|++.-|.
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHT 54 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHK 54 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSS
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCC
Confidence 5999877899999999999999876575
No 131
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.84 E-value=3.9 Score=27.64 Aligned_cols=24 Identities=25% Similarity=0.737 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|.....+..|+..-
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~H 33 (44)
T 2emx_A 10 PFGCSC--CEKAFSSKSYLLVHQQTH 33 (44)
T ss_dssp CEECSS--SSCEESSHHHHHHHHHHH
T ss_pred CccCCC--CCcccCCHHHHHHHHHHh
Confidence 689985 999999999999998763
No 132
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.77 E-value=4.7 Score=27.57 Aligned_cols=23 Identities=22% Similarity=0.502 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|++.
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2elz_A 12 PYKCED--CGKGYNRRLNLDMHQRV 34 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHGGG
T ss_pred CeeCcc--cCchhCCHHHHHHHHHh
Confidence 689985 99999999999999875
No 133
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.67 E-value=3.8 Score=28.10 Aligned_cols=23 Identities=30% Similarity=0.584 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2yto_A 12 PYKCSD--CGKAFTRKSGLHIHQQS 34 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHH
T ss_pred CEECcc--cCCccCCHhHHHHHHHH
Confidence 589985 99999999999999876
No 134
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.60 E-value=3.1 Score=26.99 Aligned_cols=23 Identities=17% Similarity=0.359 Sum_probs=20.1
Q ss_pred ccccCCCCccccccch-hHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAA-EFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~-eFV~KHI~n 329 (541)
-|.|.. |+|.|... .-+..|+..
T Consensus 9 ~~~C~~--C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 9 AMKCPY--CDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CEECSS--SSCEECSSCHHHHHHHHH
T ss_pred CeECCC--CChhhccCHHHHHHHHHh
Confidence 589985 99999999 999999865
No 135
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.46 E-value=3.8 Score=27.99 Aligned_cols=23 Identities=26% Similarity=0.860 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ene_A 12 PYKCNE--CGKVFRHNSYLSRHQRI 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTT
T ss_pred CeECCC--CCchhCChHHHHHHHhh
Confidence 689985 99999999999999986
No 136
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.36 E-value=4 Score=27.85 Aligned_cols=23 Identities=26% Similarity=0.625 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ep0_A 12 PYKCDV--CHKSFRYGSSLTVHQRI 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTT
T ss_pred CeeCcc--cCcccCChHHHHHHHHH
Confidence 689985 99999999999999876
No 137
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.14 E-value=3.8 Score=27.61 Aligned_cols=23 Identities=30% Similarity=0.629 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (44)
T 2eoj_A 12 PYECCE--CGKVFSRKDQLVSHQKT 34 (44)
T ss_dssp SCEETT--TTEECSSHHHHHHHHTT
T ss_pred CeeCCC--CCCccCCHHHHHHHHHH
Confidence 589985 99999999999999876
No 138
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=56.09 E-value=6.1 Score=31.68 Aligned_cols=27 Identities=22% Similarity=0.423 Sum_probs=21.8
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|.|.. |+|.|....-+.+|++.-+.+
T Consensus 73 ~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 99 (106)
T 2ee8_A 73 PFKCQE--CGKGFCQSRTLAVHKTLHMQT 99 (106)
T ss_dssp TTSCSS--SCCCCSSHHHHHHHHHHTTSC
T ss_pred CeECCC--cCCcccCHHHHHHHHHHhCCC
Confidence 589985 999999999999998765543
No 139
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=55.96 E-value=4.6 Score=27.61 Aligned_cols=25 Identities=24% Similarity=0.529 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2el6_A 12 PYKCSQ--CEKSFSGKLRLLVHQRMHT 36 (46)
T ss_dssp SEECSS--SSCEESSHHHHHHHHGGGC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcC
Confidence 589986 9999999999999987633
No 140
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.74 E-value=4 Score=27.85 Aligned_cols=23 Identities=35% Similarity=0.619 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytj_A 12 PYICAE--CGKAFTIRSNLIKHQKI 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHH
T ss_pred CeECCC--CChhhCCHHHHHHHHHH
Confidence 689985 99999999999999875
No 141
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.63 E-value=4 Score=27.88 Aligned_cols=24 Identities=25% Similarity=0.664 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2eq0_A 12 PYKCHE--CGKVFRRNSHLARHQLIH 35 (46)
T ss_dssp CEECTT--TCCEESSHHHHHHHHTTT
T ss_pred CeECCC--CCchhCCHHHHHHHHHHc
Confidence 689985 999999999999998763
No 142
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.62 E-value=4.3 Score=27.68 Aligned_cols=24 Identities=25% Similarity=0.742 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytk_A 12 PYKCNE--CGKVFTQNSHLTNHWRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHH
T ss_pred CEeCCc--CCCccCCHHHHHHHHHHH
Confidence 689985 999999999999998753
No 143
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=55.16 E-value=4.1 Score=27.82 Aligned_cols=23 Identities=30% Similarity=0.778 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ema_A 12 RYKCNE--CGKVFSRNSQLSQHQKI 34 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTG
T ss_pred CcCCCC--CcchhCCHHHHHHHHHh
Confidence 689985 99999999999999876
No 144
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=55.03 E-value=5.8 Score=29.07 Aligned_cols=25 Identities=20% Similarity=0.611 Sum_probs=22.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+...|
T Consensus 10 ~~~C~~--C~k~f~~~~~l~~H~~~~H 34 (66)
T 2drp_A 10 TYRCKV--CSRVYTHISNFCRHYVTSH 34 (66)
T ss_dssp EEECTT--TCCEESSHHHHHHHHHHHS
T ss_pred ceECCC--CcchhCCHHHHHHHHHHHc
Confidence 689985 9999999999999999877
No 145
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.01 E-value=4.8 Score=27.37 Aligned_cols=24 Identities=25% Similarity=0.560 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eme_A 12 PYVCDY--CGKAFGLSAELVRHQRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGG
T ss_pred CeECCC--CChhhCCHHHHHHHHHhc
Confidence 689986 999999999999999753
No 146
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.93 E-value=5.1 Score=27.30 Aligned_cols=23 Identities=22% Similarity=0.556 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoq_A 12 PFKCDI--CGKSFCGRSRLNRHSMV 34 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHH
T ss_pred CcCCCc--CCchhCCHHHHHHHHHH
Confidence 689986 99999999999999875
No 147
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=54.91 E-value=4.6 Score=27.44 Aligned_cols=23 Identities=35% Similarity=0.686 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2em9_A 12 PYNCKE--CGKSFRWASCLLKHQRV 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHGGG
T ss_pred CeECCc--cccccCChHHHHHHHHH
Confidence 689985 99999999999999876
No 148
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.84 E-value=3.8 Score=27.99 Aligned_cols=24 Identities=29% Similarity=0.736 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2en6_A 12 PYGCNE--CGKTFSQKSILSAHQRTH 35 (46)
T ss_dssp CEEETT--TTEEESSHHHHHHHHHHH
T ss_pred CeECCC--CCcccCchHHHHHHHHHc
Confidence 589985 999999999999998763
No 149
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.81 E-value=3.3 Score=28.23 Aligned_cols=23 Identities=26% Similarity=0.668 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eor_A 12 PYNCEE--CGKAFIHDSQLQEHQRI 34 (46)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHH
T ss_pred CccCCC--CCCCcCCHHHHHHHHHh
Confidence 689985 99999999999999875
No 150
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=54.71 E-value=7.3 Score=31.53 Aligned_cols=27 Identities=22% Similarity=0.428 Sum_probs=23.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|.|.+ |+|.|....-+.+|++..|..
T Consensus 69 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 95 (107)
T 1wjp_A 69 KLTCLE--CMRTFKSSFSIWRHQVEVHNQ 95 (107)
T ss_dssp GGEEGG--GTEECSSHHHHHHHHHHTSCC
T ss_pred CccCcc--ccchhCCHHHHHHHHHHHcCC
Confidence 689985 999999999999999877753
No 151
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=54.32 E-value=4.2 Score=27.72 Aligned_cols=25 Identities=20% Similarity=0.514 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|++.-+
T Consensus 10 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 34 (45)
T 2epq_A 10 PYSCPV--CGLRFKRKDRMSYHVRSHD 34 (45)
T ss_dssp SSEETT--TTEECSCHHHHHHHHHHHS
T ss_pred CCcCCC--CCcccCCHHHHHHHHHHcc
Confidence 689985 9999999999999987643
No 152
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.24 E-value=3.5 Score=28.15 Aligned_cols=23 Identities=35% Similarity=0.605 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2emh_A 12 PYICTV--CGKAFTDRSNLIKHQKI 34 (46)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHH
T ss_pred CcCCCC--CCchhCCHHHHHHHHHh
Confidence 589985 99999999999999875
No 153
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=54.11 E-value=6.4 Score=27.86 Aligned_cols=25 Identities=20% Similarity=0.509 Sum_probs=21.3
Q ss_pred cccCCCCccccccchhHHHHHHhhhCh
Q 009169 306 YGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 306 ~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
|.|.. |+|.|....-+..|+..-+.
T Consensus 2 ~~C~~--C~~~f~~~~~l~~H~~~h~~ 26 (57)
T 1bbo_A 2 YICEE--CGIRXKKPSMLKKHIRTHTD 26 (57)
T ss_dssp CBCTT--TCCBCSSHHHHHHHHHHTSS
T ss_pred CcCCC--CcCcCCCHHHHHHHHHhcCC
Confidence 78975 99999999999999987443
No 154
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=53.92 E-value=4.9 Score=34.65 Aligned_cols=41 Identities=22% Similarity=0.435 Sum_probs=29.7
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
|..+++..+.+ -.|.|.+.+|+|.|....-+.+|++.-|.|
T Consensus 108 L~~H~~~h~~~---~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~ 148 (155)
T 2rpc_A 108 LKIHKRTHTGE---KPFKCEFEGCDRRFANSSDRKKHMHVHTSD 148 (155)
T ss_dssp HHHHHTTTCSS---CSBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred HHHHHHhhCCC---CCccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence 34455544444 258998767999999999999999865544
No 155
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.88 E-value=4.8 Score=27.16 Aligned_cols=24 Identities=25% Similarity=0.646 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (44)
T 2emb_A 12 RYECSK--CQATFNLRKHLIQHQKTH 35 (44)
T ss_dssp SEECTT--TCCEESCHHHHHHHGGGG
T ss_pred CeECCC--CCCccCCHHHHHHHHHHc
Confidence 589985 999999999999999753
No 156
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=53.83 E-value=5.4 Score=27.25 Aligned_cols=24 Identities=29% Similarity=0.522 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|++.-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ely_A 12 PFKCVE--CGKGFSRRSALNVHHKLH 35 (46)
T ss_dssp SBCCSS--SCCCBSSTTHHHHHHHHH
T ss_pred CcccCc--cCcccCCHHHHHHHHHHc
Confidence 689986 999999999999998763
No 157
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.80 E-value=3.6 Score=28.14 Aligned_cols=23 Identities=26% Similarity=0.540 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2emp_A 12 PYMCNE--CGKAFSVYSSLTTHQVI 34 (46)
T ss_dssp SEECSS--SCCEESCHHHHHHHHHH
T ss_pred CeECCC--CCchhCCHHHHHHHHHH
Confidence 589986 99999999999999875
No 158
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.65 E-value=4.9 Score=27.33 Aligned_cols=24 Identities=25% Similarity=0.722 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2eoe_A 12 PYKCNE--CGKVFTQNSHLANHQRIH 35 (46)
T ss_dssp SSEETT--TTEECSSHHHHHHHHGGG
T ss_pred CeECCC--cChhhCCHHHHHHHHHHc
Confidence 689986 999999999999998753
No 159
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.64 E-value=3.9 Score=27.94 Aligned_cols=23 Identities=26% Similarity=0.492 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2en3_A 12 PFQCKE--CGMNFSWSCSLFKHLRS 34 (46)
T ss_dssp SEECSS--SCCEESSSHHHHHHHHH
T ss_pred CeeCcc--cChhhCCHHHHHHHHHH
Confidence 589986 99999999999999865
No 160
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.47 E-value=6.7 Score=32.02 Aligned_cols=27 Identities=15% Similarity=0.221 Sum_probs=24.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|.|.+ |+|.|....-+.+|++..|..
T Consensus 80 ~~~C~~--C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 80 VLKCMY--CGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHHHHTTTT
T ss_pred ceECCC--CCCccCCHHHHHHHHHHhCCc
Confidence 689985 999999999999999987764
No 161
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.36 E-value=4.3 Score=27.43 Aligned_cols=25 Identities=16% Similarity=0.647 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2yu5_A 12 PFKCSK--CDRVFTQRNYLVQHERTHA 36 (44)
T ss_dssp SEECSS--SSCEESSSHHHHHHHHHCC
T ss_pred CeECCC--CCchhCCHHHHHHHhHhcC
Confidence 589985 9999999999999987633
No 162
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.28 E-value=5.8 Score=27.08 Aligned_cols=23 Identities=30% Similarity=0.661 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2emz_A 12 PFKCNE--CGKGFGRRSHLAGHLRL 34 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHH
T ss_pred CeECCC--CCcccCCHHHHHHHHHH
Confidence 589985 99999999999999875
No 163
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=53.24 E-value=4.3 Score=28.79 Aligned_cols=23 Identities=26% Similarity=0.665 Sum_probs=20.4
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|.....+..|+..
T Consensus 4 ~~~C~~--C~~~f~~~~~l~~H~~~ 26 (57)
T 3uk3_C 4 SRECSY--CGKFFRSNYYLNIHLRT 26 (57)
T ss_dssp -CBCTT--TCCBCSCHHHHHHHHHH
T ss_pred CccCCC--CcchhCChHHHHHHHHH
Confidence 689986 99999999999999986
No 164
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=52.95 E-value=3.9 Score=30.69 Aligned_cols=25 Identities=20% Similarity=0.745 Sum_probs=22.4
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.+..|+|.|....-+..|+..
T Consensus 19 ~~~C~~~~C~k~f~~~~~l~~H~~~ 43 (73)
T 1f2i_G 19 PYACPVESCDRRFSRSDELTRHIRI 43 (73)
T ss_dssp CEECSSTTBCCEESSHHHHHHHHHH
T ss_pred ccCCcCCCCCCccCCHHHHHHHHHh
Confidence 6999866799999999999999875
No 165
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=52.92 E-value=4.2 Score=34.10 Aligned_cols=28 Identities=25% Similarity=0.367 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChHH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 334 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E~ 334 (541)
.|.|.. |+|.|....-+..|+.+.|++.
T Consensus 100 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~~ 127 (129)
T 2wbt_A 100 TKVCPV--CKKEFTSTDSALDHVCKKHNIC 127 (129)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHHTTCCC
T ss_pred CCCCCC--CCcccCCHHHHHHHHHHHCCcc
Confidence 578875 8888888888888888877653
No 166
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=52.84 E-value=5.7 Score=30.62 Aligned_cols=25 Identities=24% Similarity=0.583 Sum_probs=14.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|...+|+|.|....-+..|+..
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~ 29 (89)
T 2wbs_A 5 THTCDYAGCGKTYTKSSHLKAHLRT 29 (89)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHTT
T ss_pred CeeCCCCCCCCcCCCHHHHHHHHHh
Confidence 4556555566666666666666554
No 167
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.82 E-value=4.9 Score=27.39 Aligned_cols=24 Identities=29% Similarity=0.666 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep2_A 12 PYECSI--CGKSFTKKSQLHVHQQIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHTT
T ss_pred CcCCCC--CCcccCCHHHHHHHHHHh
Confidence 589986 999999999999998753
No 168
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=52.55 E-value=9.2 Score=30.08 Aligned_cols=40 Identities=23% Similarity=0.423 Sum_probs=27.6
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
|..+++....+ ..|.|....|+|.|....-+..|+..-+.
T Consensus 33 l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 72 (100)
T 2ebt_A 33 LKAHLRTHTGE---KPYKCTWEGCDWRFARSDELTRHYRKHTG 72 (100)
T ss_dssp HHHHHHHHSCC---CCEECCSSSCCCEESSHHHHHHHHHHHTS
T ss_pred HHHHHHHhCCC---CCeeCCCCCCCCccCCHHHHHHHHHHhCC
Confidence 34455544444 26899755699999999999999876443
No 169
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=52.20 E-value=7.6 Score=30.38 Aligned_cols=39 Identities=18% Similarity=0.312 Sum_probs=28.1
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
|..+++....+ ..|.|.+ |+|.|....-+..|+...|.+
T Consensus 23 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 61 (95)
T 2yt9_A 23 LNRHKLSHSGE---KPYSCPV--CGLRFKRKDRMSYHVRSHDGS 61 (95)
T ss_dssp HHHHHHHSCSS---CSEECSS--SCCEESCHHHHHHHHHHHCCC
T ss_pred HHHHHHhcCCC---CCCcCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 34455544343 2689986 999999999999999876654
No 170
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.16 E-value=4.9 Score=27.48 Aligned_cols=24 Identities=25% Similarity=0.663 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2em2_A 12 PFKCKE--CGKAFRQNIHLASHLRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHH
T ss_pred CEECCc--CCchhCCHHHHHHHHHHh
Confidence 689985 999999999999998763
No 171
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=51.94 E-value=8.4 Score=33.60 Aligned_cols=39 Identities=28% Similarity=0.485 Sum_probs=30.0
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
|..+++..+.|+ .|.|.. |+|.|.....+.+|+++-|++
T Consensus 66 L~~H~~~H~~~k---~~~C~~--C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 66 RTKHEIHHTGER---RYQCLA--CGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp HHHHHHHHHTCC---CEEESS--SCCEESSHHHHHHHHHHHTCC
T ss_pred hhhhccccCCCc---cccCCC--CCCCcCCHHHHHHHhHHhcCC
Confidence 344555545553 589985 999999999999999998875
No 172
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.94 E-value=5.1 Score=27.39 Aligned_cols=23 Identities=22% Similarity=0.759 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoy_A 12 CFKCNK--CEKTFSCSKYLTQHERI 34 (46)
T ss_dssp CEECSS--SCCEESSSHHHHHHHTT
T ss_pred CEECcC--CCCcCCCHHHHHHHHHH
Confidence 589986 99999999999999875
No 173
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=51.87 E-value=7.5 Score=27.89 Aligned_cols=25 Identities=24% Similarity=0.655 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 2 ~~~C~~--C~~~f~~~~~l~~H~~~h~ 26 (60)
T 2adr_A 2 SFVCEV--CTRAFARQEHLKRHYRSHT 26 (60)
T ss_dssp CBCCTT--TCCCBSCHHHHHHHHHTTT
T ss_pred cCcCCC--CccccCCHHHHHHHHHHhC
Confidence 478985 9999999999999998743
No 174
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=51.87 E-value=5.3 Score=30.58 Aligned_cols=27 Identities=19% Similarity=0.365 Sum_probs=23.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|.|.. |+|.|....-+..|++..|.+
T Consensus 47 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 47 AFVCSK--CGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSS--SCCEESCHHHHHHHHHHCCCC
T ss_pred ceECCC--CCChhCCHHHHHHHHHHccCC
Confidence 589985 999999999999999887665
No 175
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.79 E-value=5.1 Score=27.21 Aligned_cols=24 Identities=21% Similarity=0.409 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2en8_A 12 SHTCDE--CGKNFCYISALRIHQRVH 35 (46)
T ss_dssp SEECTT--TCCEESSHHHHHHHHTTT
T ss_pred CeECCC--cCcccCCHHHHHHHHHHh
Confidence 589985 999999999999998753
No 176
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.76 E-value=4.7 Score=27.56 Aligned_cols=23 Identities=39% Similarity=0.759 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoo_A 12 PYGCNE--CGKNFGRHSHLIEHLKR 34 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHH
T ss_pred CEEccc--cCcccCCHHHHHHHHHH
Confidence 589986 99999999999999876
No 177
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=51.38 E-value=8.8 Score=28.94 Aligned_cols=38 Identities=26% Similarity=0.390 Sum_probs=27.6
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
|..+++....+ ..|.|.. |+|.|....-+..|+...+.
T Consensus 17 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~ 54 (82)
T 2kmk_A 17 LSTHLLIHSDT---RPYPCQY--CGKRFHQKSDMKKHTFIHTG 54 (82)
T ss_dssp HHHHHHHHHTC---CCEECSS--SCCEESSHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCC---CCeeCCc--CChhhCCHHHHHHHHHHhcC
Confidence 34455544444 2699986 99999999999999976543
No 178
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=51.18 E-value=11 Score=30.14 Aligned_cols=38 Identities=26% Similarity=0.450 Sum_probs=27.4
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
|..+++....+ ..|.|.+ |.|.|....-+..|+...+.
T Consensus 33 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~ 70 (106)
T 2ee8_A 33 LLIHERTHTDE---RPYTCDI--CHKAFRRQDHLRDHRYIHSK 70 (106)
T ss_dssp HHHHHHHHCCS---CCCBCSS--SCCBCSCHHHHHHHGGGSCC
T ss_pred HHHHHHHcCCC---CCcCCCC--ccchhCCHHHHHHHHHHhCC
Confidence 33455544444 2689986 99999999999999876544
No 179
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.10 E-value=5.1 Score=27.32 Aligned_cols=24 Identities=25% Similarity=0.649 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2en1_A 12 PFKCEE--CGKRFTQNSQLHSHQRVH 35 (46)
T ss_dssp SEEETT--TTEEESSHHHHHHHGGGG
T ss_pred CeeCCC--CCcccCCHHHHHHHHHHc
Confidence 689985 999999999999998763
No 180
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.06 E-value=4.5 Score=27.57 Aligned_cols=23 Identities=26% Similarity=0.520 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ysp_A 12 PYKCEK--CGKGYNSKFNLDMHQKV 34 (46)
T ss_dssp SEEETT--TTEEESCHHHHHHHHTT
T ss_pred CeECCC--CCCccCCHHHHHHHHHh
Confidence 689985 99999999999999876
No 181
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=50.82 E-value=7.8 Score=30.37 Aligned_cols=38 Identities=21% Similarity=0.371 Sum_probs=26.9
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
|..+++....+ ..|.|.+ |+|.|....-+..|+...+.
T Consensus 24 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~ 61 (96)
T 2dmd_A 24 LKTHMRCHTGV---KPYKCKT--CDYAAADSSSLNKHLRIHSD 61 (96)
T ss_dssp HHHHGGGCCCC---CSEECSS--SCCEESSHHHHHHHHHHSCC
T ss_pred HHHHHHhcCCC---CCEeCCC--CCCccCCHHHHHHHHHHhCC
Confidence 34455544333 3689985 99999999999999876544
No 182
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=50.63 E-value=9 Score=30.98 Aligned_cols=39 Identities=26% Similarity=0.451 Sum_probs=28.9
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
|..+++....+ ..|.|.. |+|.|....-+..|+..-|.+
T Consensus 25 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 63 (110)
T 2csh_A 25 RDRHMSMHLGL---RPYGCGV--CGKKFKMKHHLVGHMKIHTGI 63 (110)
T ss_dssp HHHHHHHHSCC---CSEECTT--TSCEESSSHHHHHHHTTTCCC
T ss_pred HHHHHHHcCCC---cCccCCC--CCcccCCHHHHHHHHHHcCCC
Confidence 44455554444 2699986 999999999999999875543
No 183
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.62 E-value=2.9 Score=28.32 Aligned_cols=25 Identities=28% Similarity=0.651 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (44)
T 2eox_A 12 SYNCNE--CGKAFTRIFHLTRHQKIHT 36 (44)
T ss_dssp CEEETT--TTEEESSSHHHHTTHHHHC
T ss_pred CeECcc--cCcccCCHHHHHHHHHHhC
Confidence 589986 9999999999999987633
No 184
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=50.59 E-value=12 Score=28.62 Aligned_cols=34 Identities=21% Similarity=0.467 Sum_probs=23.5
Q ss_pred hhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhh
Q 009169 291 DPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 291 e~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
..+++....+ ..|.|.. |+|.|....-+.+|++.
T Consensus 54 ~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 54 TRHYRKHTGH---RPFQCQK--CDRAFSRSDHLALHMKR 87 (89)
T ss_dssp HHHHHHHHCC---CCEECSS--SSCEESSHHHHHHHGGG
T ss_pred HHHHHHcCCC---CCccCCC--CCcccCCHHHHHHHHHh
Confidence 3444444444 2588875 88999888888888764
No 185
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.31 E-value=5.6 Score=27.07 Aligned_cols=24 Identities=21% Similarity=0.414 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2yso_A 12 SHQCRE--CGEIFFQYVSLIEHQVLH 35 (46)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHH
T ss_pred CEEccc--cChhhCCHHHHHHHHHHh
Confidence 589985 999999999999998753
No 186
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.22 E-value=7.6 Score=26.47 Aligned_cols=23 Identities=22% Similarity=0.414 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2em8_A 12 PYKCVE--CGKGYKRRLDLDFHQRV 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHH
T ss_pred CeECcc--cCchhCCHHHHHHHHHH
Confidence 689985 99999999999999875
No 187
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.91 E-value=7.1 Score=25.90 Aligned_cols=23 Identities=22% Similarity=0.587 Sum_probs=20.5
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 11 ~~~C~~--C~k~f~~~~~L~~H~~~ 33 (42)
T 2en2_A 11 PYKCET--CGARFVQVAHLRAHVLI 33 (42)
T ss_dssp SEECTT--TCCEESSHHHHHHHTHH
T ss_pred CEeCCC--cChhhCCHHHHHHHHHH
Confidence 589985 99999999999999874
No 188
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.42 E-value=6 Score=27.04 Aligned_cols=25 Identities=20% Similarity=0.498 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|....|+|.|....-+..|+..
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~ 36 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRS 36 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH
Confidence 5899744699999999999999876
No 189
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=49.36 E-value=8.3 Score=29.19 Aligned_cols=26 Identities=23% Similarity=0.393 Sum_probs=22.6
Q ss_pred cccCCCC-ccccccchhHHHHHHhhhC
Q 009169 306 YGCGAKG-CTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 306 ~~C~~~~-CtKlFKg~eFV~KHI~nKH 331 (541)
|.|...+ |+|.|+...-+.+|++.-|
T Consensus 59 ~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 59 YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 8998555 9999999999999998765
No 190
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.77 E-value=6 Score=26.94 Aligned_cols=23 Identities=30% Similarity=0.801 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytd_A 12 PYKCSE--CGKAFHRHTHLNEHRRI 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHH
T ss_pred CeECCC--CCCeeCChHHHHHHHHH
Confidence 589986 99999999999999875
No 191
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.57 E-value=4.1 Score=27.79 Aligned_cols=24 Identities=21% Similarity=0.681 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytg_A 12 PFKCGE--CGKSYNQRVHLTQHQRVH 35 (46)
T ss_dssp SEECTT--TCCEESSSHHHHTTGGGG
T ss_pred CeECCC--CCcccCCHHHHHHHHHHc
Confidence 689985 999999999999998753
No 192
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=48.46 E-value=7.3 Score=29.40 Aligned_cols=26 Identities=19% Similarity=0.422 Sum_probs=22.3
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 17 ~~~C~~--C~k~f~~~~~l~~H~~~H~~ 42 (74)
T 2lce_A 17 PYKCDR--CQASFRYKGNLASHKTVHTG 42 (74)
T ss_dssp SBCCTT--SSCCBSCHHHHHHHHHHHCC
T ss_pred CeECCC--CCceeCCHHHHHHHHHHcCC
Confidence 699985 99999999999999976443
No 193
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=48.04 E-value=5.7 Score=27.57 Aligned_cols=25 Identities=20% Similarity=0.502 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|++.-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (48)
T 2epr_A 12 QVACEI--CGKIFRDVYHLNRHKLSHS 36 (48)
T ss_dssp SEEETT--TTEEESSHHHHHHHGGGSC
T ss_pred CeeCCC--CCcccCCHHHHHHHHHhcC
Confidence 689985 9999999999999987633
No 194
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.82 E-value=6.5 Score=26.75 Aligned_cols=23 Identities=22% Similarity=0.420 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2enc_A 12 PFKCEE--CGKGFYTNSQCYSHQRS 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHH
T ss_pred CcCCCC--CCCcCCChHHHHHHHHH
Confidence 589985 99999999999999875
No 195
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.50 E-value=6.1 Score=26.81 Aligned_cols=23 Identities=22% Similarity=0.348 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2epw_A 12 PCKCTE--CGKAFCWKSQLIMHQRT 34 (46)
T ss_dssp SEECSS--SCCEESSSHHHHHHHHH
T ss_pred CeeCCC--CCCccCCHHHHHHHHHH
Confidence 589985 99999999999999876
No 196
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=46.95 E-value=10 Score=29.24 Aligned_cols=37 Identities=16% Similarity=0.455 Sum_probs=27.0
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhC
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
|..+++....+ ..|.|.. |+|.|....-+..|+...+
T Consensus 22 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~ 58 (90)
T 1a1h_A 22 LTRHIRIHTGQ---KPFQCRI--CMRNFSRSDHLTTHIRTHT 58 (90)
T ss_dssp HHHHHHHHHCC---CCEECTT--TCCEESCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC---CCccCCC--CCcccCCHHHHHHHHHHcC
Confidence 34455554444 2689985 9999999999999997643
No 197
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=46.77 E-value=16 Score=30.88 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=25.3
Q ss_pred cccccCCCCccccccchhHHHHHHhhhChHHHHHHHh
Q 009169 304 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTS 340 (541)
Q Consensus 304 ~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E~v~~~~~ 340 (541)
+...|. .|+|.||. +.+|+.+.|.---++-+.
T Consensus 20 d~iiCl--ecGK~fK~---LkRHL~~~hgltpeeYR~ 51 (87)
T 2jsp_A 20 DHIVCL--ECGGSFKS---LKRHLTTHHSMTPEEYRE 51 (87)
T ss_dssp SCEECT--BTCCEESB---HHHHHHHTTCSCHHHHHH
T ss_pred CceEec--ccchhhHH---HHHHHHHccCCCHHHHHH
Confidence 578997 59999995 679999999876666544
No 198
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=46.71 E-value=6.8 Score=32.00 Aligned_cols=27 Identities=26% Similarity=0.450 Sum_probs=23.6
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|.|.. |+|.|....-+.+|++.-|.+
T Consensus 28 ~h~C~~--Cgk~F~~~~~L~~H~~~H~~~ 54 (85)
T 2lv2_A 28 CHLCPV--CGESFASKGAQERHLRLLHAA 54 (85)
T ss_dssp TEECTT--SCCEESSHHHHHHHHHTTSCS
T ss_pred CEECCC--CCCCcCcHHHHhhhhhhccCC
Confidence 689986 999999999999999876554
No 199
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=46.09 E-value=7.9 Score=29.56 Aligned_cols=27 Identities=30% Similarity=0.684 Sum_probs=23.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|.|.. |.|.|....-+..|+...|.+
T Consensus 15 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~ 41 (86)
T 1x6h_A 15 PYACSH--CDKTFRQKQLLDMHFKRYHDP 41 (86)
T ss_dssp CEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred CCcCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 589986 999999999999999887754
No 200
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=45.89 E-value=12 Score=30.40 Aligned_cols=35 Identities=17% Similarity=0.447 Sum_probs=19.9
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhh
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
|..+++....+ ..|.|.. |+|.|....-+..|+..
T Consensus 54 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~ 88 (119)
T 2jp9_A 54 LKRHQRRHTGV---KPFQCKT--CQRKFSRSDHLKTHTRT 88 (119)
T ss_dssp HHHHHHHHHCC---CCEECTT--TCCEESCHHHHHHHHHH
T ss_pred HHHHHHHcCCC---CCccCCc--cCchhCCHHHHHHHHHH
Confidence 34444443333 2466764 77777777777777654
No 201
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=45.73 E-value=9.2 Score=34.21 Aligned_cols=33 Identities=21% Similarity=0.448 Sum_probs=28.1
Q ss_pred ccccCCCCccccccchhHHHHHHh-hhChHHHHHHH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLK-LKHPELVIELT 339 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~-nKH~E~v~~~~ 339 (541)
.|.|.. |+|.|....-+..|++ ++|...|..+.
T Consensus 50 pfyC~~--C~K~F~~~~~L~~H~rsK~HKrrvk~l~ 83 (124)
T 1zr9_A 50 LHRCLA--CARYFIDSTNLKTHFRSKDHKKRLKQLS 83 (124)
T ss_dssp CSEETT--TTEECSSHHHHHHHTTCHHHHHHHHHHT
T ss_pred ceEccc--CcchhCCHHHHHHHHhhhhhhHHHHHhc
Confidence 799985 9999999999999998 67877776653
No 202
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=45.40 E-value=11 Score=32.27 Aligned_cols=40 Identities=33% Similarity=0.499 Sum_probs=29.2
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
|..+++....+ ..|.|.+.+|+|.|....-+.+|+...|.
T Consensus 85 l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 85 LKTHLRSHTGE---KPYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp HHHHHHHTTTC---CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred HHHHHHHcCCC---CCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 34455554444 26899866799999999999999977675
No 203
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=45.29 E-value=9.3 Score=28.44 Aligned_cols=25 Identities=12% Similarity=0.295 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 9 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 33 (70)
T 1x5w_A 9 PEKCSE--CSYSCSSKAALRIHERIHC 33 (70)
T ss_dssp SEECSS--SSCEESSHHHHHHHHGGGC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcC
Confidence 689986 9999999999999998733
No 204
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.89 E-value=9 Score=25.99 Aligned_cols=23 Identities=26% Similarity=0.749 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2yu8_A 12 PYKCNE--CGKVFTQNSHLARHRRV 34 (46)
T ss_dssp SEECSS--SCCEESSSHHHHHHTHH
T ss_pred CeECCc--CCchhCCHHHHHHHHHh
Confidence 589985 99999999999999864
No 205
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=44.77 E-value=20 Score=27.70 Aligned_cols=28 Identities=18% Similarity=0.334 Sum_probs=25.5
Q ss_pred cccccCCCCccccccchhHHHHHHhhhC
Q 009169 304 WKYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 304 ~K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
..|.|.-.+|+..++...=+..||+.+|
T Consensus 37 ~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 37 EPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 3799998999999999999999999988
No 206
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=44.66 E-value=18 Score=29.25 Aligned_cols=37 Identities=24% Similarity=0.485 Sum_probs=27.2
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhh
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
|..+++....++ .|.|....|+|.|....-+.+|+++
T Consensus 82 l~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~L~~H~~~ 118 (119)
T 2jp9_A 82 LKTHTRTHTGEK---PFSCRWPSCQKKFARSDELVRHHNM 118 (119)
T ss_dssp HHHHHHHHHTCC---CEECCSTTCCCEESSHHHHHHHHHT
T ss_pred HHHHHHHhcCCC---CeeCCCCCCccccCCHHHHHHHHhc
Confidence 444665555542 5899444699999999999999864
No 207
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=44.45 E-value=7.6 Score=29.21 Aligned_cols=25 Identities=28% Similarity=0.712 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|++.-+
T Consensus 14 ~~~C~~--C~k~f~~~~~L~~H~~~h~ 38 (72)
T 1x6e_A 14 PYGCVE--CGKAFSRSSILVQHQRVHT 38 (72)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHGGG
T ss_pred CccCCC--CCCccCCHHHHHHHHHhcC
Confidence 689985 9999999999999998643
No 208
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=44.31 E-value=12 Score=29.39 Aligned_cols=26 Identities=27% Similarity=0.483 Sum_probs=22.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
-|.|.. |.|.|.....+.+|++.-+.
T Consensus 13 py~C~~--CgK~F~~~s~L~~H~r~Htg 38 (66)
T 2epp_A 13 ILPCGL--CGKVFTDANRLRQHEAQHGV 38 (66)
T ss_dssp CCCCTT--TCCCCSCHHHHHHHHHHHTT
T ss_pred CcCCCC--CCCccCCHHHHHhhhhhhCC
Confidence 589985 99999999999999987433
No 209
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=42.67 E-value=16 Score=32.56 Aligned_cols=40 Identities=25% Similarity=0.438 Sum_probs=27.5
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhChH
Q 009169 289 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 289 ~le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
.|..+++..+.++ .|.|.+ |+|.|....-+.+|++.-|++
T Consensus 148 ~L~~H~~~H~~~~---~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 187 (190)
T 2i13_A 148 NLHTHQRTHTGEK---PYKCPE--CGKSFSRRDALNVHQRTHTGK 187 (190)
T ss_dssp HHHHHHHHHHCCC---CEECTT--TCCEESSHHHHHHHHTTC---
T ss_pred HHHHHHHhcCCCC---CeECCC--CCCccCCHHHHHHHHHhcCCC
Confidence 3445666555542 689985 999999999999998875554
No 210
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=42.45 E-value=13 Score=31.24 Aligned_cols=25 Identities=24% Similarity=0.361 Sum_probs=15.2
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+...|
T Consensus 50 pf~C~~--Cgk~F~~~~~L~~H~~r~H 74 (102)
T 2ghf_A 50 SYVCVE--CNFLTKRYDALSEHNLKYH 74 (102)
T ss_dssp CEEETT--TTEEESSTHHHHTHHHHTS
T ss_pred CcCCCC--CCcccCCHHHHHHHHHHhc
Confidence 366654 6677776666666643344
No 211
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=42.27 E-value=12 Score=30.79 Aligned_cols=37 Identities=19% Similarity=0.338 Sum_probs=25.7
Q ss_pred hhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhh
Q 009169 291 DPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLK 330 (541)
Q Consensus 291 e~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nK 330 (541)
..+++....+ ..|.|.+..|+|.|....-+..|+..-
T Consensus 51 ~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~h 87 (124)
T 1ubd_C 51 KRHQLVHTGE---KPFQCTFEGCGKRFSLDFNLRTHVRIH 87 (124)
T ss_dssp HHHGGGTSCC---CCEECCSTTCCCEESCHHHHHHHHHHH
T ss_pred HHHHHHcCCC---CCeeCCCCCCcCccCCHHHHHHHHHHh
Confidence 3344443333 258897667999999999999998653
No 212
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=42.20 E-value=16 Score=31.31 Aligned_cols=39 Identities=23% Similarity=0.381 Sum_probs=28.7
Q ss_pred hhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhCh
Q 009169 291 DPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 291 e~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
..+++....+ ..|.|.+.+|+|.|....-+..|+..-+.
T Consensus 79 ~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~h~~ 117 (155)
T 2rpc_A 79 VNHIRVHTGE---KPFPCPFPGCGKIFARSENLKIHKRTHTG 117 (155)
T ss_dssp HHHTHHHHCC---CSEECSCTTTCCEESCHHHHHHHHTTTCS
T ss_pred HHHHHhcCCC---CcccCCcCCCCCccCCHHHHHHHHHhhCC
Confidence 3344444444 26899877799999999999999986543
No 213
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.15 E-value=14 Score=28.84 Aligned_cols=27 Identities=15% Similarity=0.304 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhhChH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 333 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~E 333 (541)
++.|. .|+|.|....-+..|+...|..
T Consensus 25 ~~~C~--~C~k~f~~~~~L~~H~~~~H~~ 51 (95)
T 2ej4_A 25 SRPKK--SCDRTFSTMHELVTHVTMEHVG 51 (95)
T ss_dssp SSSCC--CCCCCCSSHHHHHHHHHHTTTC
T ss_pred CCccc--ccccccCCHHHHHHHHHHhccC
Confidence 45676 4999999999999999886754
No 214
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=38.26 E-value=21 Score=29.08 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=20.8
Q ss_pred ccccCCCCccccc-cchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLF-HAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlF-Kg~eFV~KHI~n 329 (541)
.|.|.. |+|.| ....-+.+|+++
T Consensus 34 ~~~C~~--C~k~F~~~~~~L~~H~~~ 57 (96)
T 2ctd_A 34 SVSCPT--CQAVGRKTIEGLKKHMEN 57 (96)
T ss_dssp CEECTT--TCSCEESSHHHHHHHHHH
T ss_pred CcCCCC--CCCCcccCHHHHHHHHHH
Confidence 689985 99999 999999999876
No 215
>4i1l_A Scurfin, forkhead box protein P3; FOXP3, dimerization, complex ensemble, stability, regulatory activity, acetyation, DNA-binding, metal-binding; 2.10A {Mus musculus}
Probab=38.02 E-value=11 Score=32.31 Aligned_cols=26 Identities=35% Similarity=0.561 Sum_probs=20.4
Q ss_pred ccCCCCccccccchhHHHHHHhhhCh
Q 009169 307 GCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 307 ~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|..+||.+.|....-..||+.+-|.
T Consensus 14 ~CkWPGCe~~~ed~~~FlkHL~~eH~ 39 (93)
T 4i1l_A 14 VCKWPGCEKVFEEPEEFLKHCQADHL 39 (93)
T ss_dssp ----CCSTTTTHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCcccCHHHHHHHhhcccC
Confidence 79899999999999999999998885
No 216
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=37.74 E-value=28 Score=28.22 Aligned_cols=26 Identities=15% Similarity=0.388 Sum_probs=18.4
Q ss_pred ccccCCCCccccccchhHHHHHHhhhCh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 332 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH~ 332 (541)
.|.|.+ |+|.|....-+..|+..-|.
T Consensus 66 ~~~C~~--C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 66 VFTCSV--CQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHHSS
T ss_pred CeECCC--CCCccCCHHHHHHHHHHcCC
Confidence 577764 77777777777777765443
No 217
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.21 E-value=13 Score=28.13 Aligned_cols=25 Identities=12% Similarity=0.193 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 7 ~~~C~~--C~k~f~~~~~L~~H~~~h~ 31 (78)
T 2d9h_A 7 GLQCEI--CGFTCRQKASLNWHQRKHA 31 (78)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred CeECCC--CCCeeCCHHHHHHHHHHhh
Confidence 689986 9999999999999987644
No 218
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.73 E-value=16 Score=27.57 Aligned_cols=25 Identities=28% Similarity=0.608 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|+..-+
T Consensus 18 ~~~C~~--C~~~f~~~~~l~~H~~~h~ 42 (77)
T 2cot_A 18 RYKCDE--CGKSFSHSSDLSKHRRTHT 42 (77)
T ss_dssp SSBCSS--SCCBCSCHHHHHHHHTTTC
T ss_pred CEECCC--CCcccCCHHHHHHHHHHcC
Confidence 689986 9999999999999997633
No 219
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=36.37 E-value=2.4 Score=27.00 Aligned_cols=23 Identities=35% Similarity=0.756 Sum_probs=18.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
-|.|.. |+|.|....-+..|+..
T Consensus 2 p~~C~~--C~k~f~~~~~L~~H~~~ 24 (32)
T 2kfq_A 2 AFACPA--CPKRFMRSDALSKHIKT 24 (32)
T ss_dssp CSSSSS--SCTTHHHHHTTSSSTTS
T ss_pred CCCCCC--CCcccCCHHHHHHHHHH
Confidence 378975 99999998888888765
No 220
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=35.71 E-value=16 Score=28.36 Aligned_cols=31 Identities=29% Similarity=0.357 Sum_probs=24.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhh-ChHHHHH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLK-HPELVIE 337 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nK-H~E~v~~ 337 (541)
+-.|.+ |+++|-..-=|+-|||.| |=++|..
T Consensus 13 ~~eC~l--C~vkYs~r~slqDHIFs~qHI~~vk~ 44 (55)
T 2yrk_A 13 KPECTL--CGVKYSARLSIRDHIFSKQHISKVRE 44 (55)
T ss_dssp CSCCTT--TTCCCCSSSCHHHHHTSHHHHHHHHH
T ss_pred Cccccc--cCcccccccchhhhhccHHHHHHHHH
Confidence 458986 999999999999999954 5555543
No 221
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=32.31 E-value=33 Score=30.41 Aligned_cols=37 Identities=24% Similarity=0.434 Sum_probs=25.0
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhh
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
|..+++..+.++ .|.|.+.+|+|.|....-+.+|++.
T Consensus 122 L~~H~~~H~~~~---~~~C~~~~C~k~F~~~~~L~~H~~~ 158 (190)
T 1tf6_A 122 LKVHQFSHTQQL---PYECPHEGCDKRFSLPSRLKRHEKV 158 (190)
T ss_dssp HHHHHGGGSSSC---SSBCCSSSCCCBCSSHHHHHHHHTS
T ss_pred HHHHHHHhCCCC---CccCCCCCCCchhcCHHHHHHHHHH
Confidence 444555544442 5788755688888888888888875
No 222
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=32.31 E-value=24 Score=24.87 Aligned_cols=25 Identities=28% Similarity=0.530 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
|--|.. |-|++..-.=+.|||+--|
T Consensus 9 kqhcrf--ckkkysdvknlikhire~h 33 (37)
T 2elu_A 9 KQHCRF--CKKKYSDVKNLIKHIRDAH 33 (37)
T ss_dssp CCEETT--TTEECSSHHHHHHHHHHTT
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHhc
Confidence 557875 9999999999999998766
No 223
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=31.24 E-value=40 Score=34.46 Aligned_cols=46 Identities=22% Similarity=0.272 Sum_probs=37.9
Q ss_pred CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHH
Q 009169 2 SYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWL 48 (541)
Q Consensus 2 sfKqF~~~~~D~isp~eA~~~Y~eYK~e~~~kq~r~FF~~HK~EeWF 48 (541)
=||||+.+++-.+|-+||...-..==..|.++|+ ++|....+-.||
T Consensus 250 GYkE~~~yL~G~~s~~eai~~~~~~TR~yAKRQ~-TWfR~~~~~~w~ 295 (316)
T 3foz_A 250 GYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQI-TWLRGWEGVHWL 295 (316)
T ss_dssp THHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHH-HHHHSCSSCEEE
T ss_pred ehhhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-HHhCCCCCCeEe
Confidence 4999999999999999998877666666777776 588877777787
No 224
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.14 E-value=26 Score=27.27 Aligned_cols=22 Identities=23% Similarity=0.309 Sum_probs=20.0
Q ss_pred cccCCCCccccccchhHHHHHHhh
Q 009169 306 YGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 306 ~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
|.|.. |+|.|....-+..|++.
T Consensus 63 ~~C~~--C~k~f~~~~~L~~H~~~ 84 (95)
T 2ej4_A 63 EECPR--EGKSFKAKYKLVNHIRV 84 (95)
T ss_dssp TTCSS--TTCCCSSHHHHHHHHHH
T ss_pred cCCCC--CCcccCCHHHHHHHHHh
Confidence 79985 99999999999999975
No 225
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=29.92 E-value=23 Score=24.36 Aligned_cols=21 Identities=19% Similarity=0.496 Sum_probs=19.0
Q ss_pred ccccCCCCccccccchhHHHHHH
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHL 327 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI 327 (541)
-|.|.. |+|-|....-+.+|+
T Consensus 8 p~~C~~--CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 8 RFMCLP--CGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCEETT--TTEECSCHHHHHHHH
T ss_pred CeECCC--CCCccCCHhHccCcC
Confidence 589974 999999999999997
No 226
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=29.02 E-value=25 Score=26.66 Aligned_cols=23 Identities=22% Similarity=0.488 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
-|.|.. |+|.|....-+..|++.
T Consensus 4 py~C~~--C~k~F~~~~~L~~H~~~ 26 (60)
T 4gzn_C 4 PFFCNF--CGKTYRDASGLSRHRRA 26 (60)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHH
T ss_pred CccCCC--CCCEeCCHHHHHHHHHH
Confidence 589985 99999999999999875
No 227
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=28.82 E-value=17 Score=28.28 Aligned_cols=23 Identities=17% Similarity=0.660 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 3 ~~~C~~--C~k~f~~~~~L~~H~~~ 25 (88)
T 1llm_C 3 PFQCRI--CMRNFSRSDHLTTHIRT 25 (88)
T ss_dssp CEECTT--TCCEESCHHHHHHHHHH
T ss_pred CCcCCC--CCCccCCHHHHHHHHHH
Confidence 589986 99999999999999976
No 228
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=27.49 E-value=28 Score=28.78 Aligned_cols=31 Identities=32% Similarity=0.524 Sum_probs=24.3
Q ss_pred ccccCCCCccccc-cchhHH-HHHHh-hhChHHHHH
Q 009169 305 KYGCGAKGCTKLF-HAAEFV-HKHLK-LKHPELVIE 337 (541)
Q Consensus 305 K~~C~~~~CtKlF-Kg~eFV-~KHI~-nKH~E~v~~ 337 (541)
||-|. .|.+-| +..-.| ++|+. .||.+.|..
T Consensus 3 kYyCd--YCd~~lt~Ds~s~Rk~H~~G~kH~~nv~~ 36 (77)
T 3cw1_L 3 KFYCD--YCDTYLTHDSPSVRKTHCSGRKHKENVKD 36 (77)
T ss_pred Ccccc--cCCceecCCCHHHHHHHHccHHHHHHHHH
Confidence 78998 499998 787786 67887 788886654
No 229
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.94 E-value=21 Score=26.30 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=15.3
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|. ..-+..|+..
T Consensus 10 ~~~C~~--C~k~f~-~~~L~~H~~~ 31 (66)
T 2eod_A 10 TQPCTY--CTKEFV-FDTIQSHQYQ 31 (66)
T ss_dssp EEECSS--SCCEEE-HHHHHHHHHH
T ss_pred Ceeccc--cCCccC-HHHHHHHHHH
Confidence 467764 777777 7777777665
No 230
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=25.39 E-value=54 Score=28.95 Aligned_cols=27 Identities=26% Similarity=0.621 Sum_probs=15.7
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|....|+|.|....-+..|+...|
T Consensus 72 ~~~C~~~~C~~~f~~~~~l~~H~~~~h 98 (190)
T 1tf6_A 72 NFTCDSDGCDLRFTTKANMKKHFNRFH 98 (190)
T ss_dssp CEECCSSSCCCEESCHHHHHHHHHTTS
T ss_pred ceeCCCCCCCCccCCHHHHHHHHHHhc
Confidence 456653346666666666666665555
No 231
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.37 E-value=33 Score=25.15 Aligned_cols=34 Identities=21% Similarity=0.172 Sum_probs=25.1
Q ss_pred hhhHHHhhhhcccCcccccC-CCCccccccchhHHHHHHhh
Q 009169 290 LDPFVRKIRDEKYGWKYGCG-AKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~-~~~CtKlFKg~eFV~KHI~n 329 (541)
|..+++. +.| -.|.|. . |+|.|....-+..|+++
T Consensus 25 L~~H~~~-~~~---~p~~C~~~--C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 25 IQSHQYQ-CPR---LPVACPNQ--CGVGTVAREDLPGHLKD 59 (66)
T ss_dssp HHHHHHH-CSS---SEEECTTC--CSCCEEETTTHHHHHHT
T ss_pred HHHHHHH-cCC---cCccCCcc--cCcccccHHHHHHHHHh
Confidence 3445443 444 268997 5 99999999999999875
No 232
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=24.82 E-value=1.5e+02 Score=30.23 Aligned_cols=47 Identities=19% Similarity=0.419 Sum_probs=38.6
Q ss_pred CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHH
Q 009169 2 SYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLK 49 (541)
Q Consensus 2 sfKqF~~~~~D~isp~eA~~~Y~eYK~e~~~kq~r~FF~~HK~EeWFr 49 (541)
=||||+.++.-.+|-++|...-..==..|.++|+ ++|....+-.||-
T Consensus 242 GYkE~~~yL~G~~sl~eaie~i~~~TR~yAKRQ~-TWfR~~~~~~w~~ 288 (322)
T 3exa_A 242 GYKEMYDYLDGNVTLEEAIDTLKRNSRRYAKRQL-TWFRNKANVTWFD 288 (322)
T ss_dssp TTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHH-HHHHTSTTEEEEE
T ss_pred eHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH-HHhcCCCCCeEeC
Confidence 4999999999999999998877666666777776 5888888888884
No 233
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=24.61 E-value=32 Score=27.87 Aligned_cols=23 Identities=22% Similarity=0.612 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 25 py~C~~--C~k~F~~~~~L~~H~~~ 47 (88)
T 1x6f_A 25 TYQCKH--CDSKLQSTAELTSHLNI 47 (88)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHH
T ss_pred CCcCCC--CCCEeCCHHHHHHHHHH
Confidence 589985 99999999999999875
No 234
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=24.57 E-value=35 Score=30.24 Aligned_cols=37 Identities=27% Similarity=0.472 Sum_probs=25.9
Q ss_pred hhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhhhC
Q 009169 290 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 290 le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
|..+++....+ ..|.|.+ |+|.|....-+.+|+..-+
T Consensus 121 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~L~~H~~~H~ 157 (190)
T 2i13_A 121 LRAHQRTHTGE---KPYKCPE--CGKSFSREDNLHTHQRTHT 157 (190)
T ss_dssp HHHHHHHHHCC---CCEECTT--TCCEESCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC---CCeECCC--CCcccCCHHHHHHHHHhcC
Confidence 34455554444 2688975 9999999999999987543
No 235
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=24.17 E-value=52 Score=28.44 Aligned_cols=36 Identities=36% Similarity=0.476 Sum_probs=27.2
Q ss_pred hhhhHHHhhhhcccCcccccCCCCccccccchhHHHHHHhh
Q 009169 289 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 289 ~le~~V~k~~dE~~g~K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|..+++..+.|+ .|.|.. |+|.|....-+..|+..
T Consensus 37 ~L~~H~~~H~~~k---~~~C~~--C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 37 SLRRHFNIHSWEK---KYPCRY--CEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp HHHHHHHHHHCCS---CEECSS--SSCEESSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCC---CeeCCc--cCeecccccchhhhccc
Confidence 3445666555553 689985 99999999999999864
No 236
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=23.46 E-value=35 Score=28.25 Aligned_cols=23 Identities=17% Similarity=0.554 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 74 ~~~C~~--C~k~f~~~~~l~~H~~~ 96 (129)
T 2wbt_A 74 QFVCPL--CLMPFSSSVSLKQHIRY 96 (129)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHH
T ss_pred CeECCC--CCcccCCHhHHHHHHHH
Confidence 699986 99999999999999976
No 237
>2m1l_A Cyclin-dependent kinase 2-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology; NMR {Homo sapiens}
Probab=22.40 E-value=40 Score=27.28 Aligned_cols=24 Identities=38% Similarity=0.538 Sum_probs=19.6
Q ss_pred CChhhHHHhHHHHHHHHHH--Hhhhh
Q 009169 141 SEPRRIQVDIEQAQALVRK--LDSEK 164 (541)
Q Consensus 141 S~p~RI~~Dl~qa~~Li~k--LDaE~ 164 (541)
+..+||.+||-+|+.||+. ++.|.
T Consensus 40 s~~ERLkRgI~hAr~LVRECl~e~er 65 (69)
T 2m1l_A 40 SAMERLKRGIIHARALVRECLAETER 65 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999997 44443
No 238
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.00 E-value=40 Score=27.19 Aligned_cols=23 Identities=17% Similarity=0.501 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 19 ~~~C~~--C~k~f~~~~~L~~H~~~ 41 (115)
T 2dmi_A 19 KFRCKD--CSAAYDTLVELTVHMNE 41 (115)
T ss_dssp SEEBSS--SSCEESSHHHHHHHHHH
T ss_pred CEECCc--cCchhcCHHHHHHHHHH
Confidence 699985 99999999999999986
No 239
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=21.83 E-value=86 Score=31.85 Aligned_cols=47 Identities=17% Similarity=0.256 Sum_probs=36.5
Q ss_pred CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHH
Q 009169 2 SYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLK 49 (541)
Q Consensus 2 sfKqF~~~~~D~isp~eA~~~Y~eYK~e~~~kq~r~FF~~HK~EeWFr 49 (541)
=||||+.++.-.+|-++|...-..==..|.++|+ ++|....+-.||-
T Consensus 256 Gyke~~~yl~g~~~~~eai~~~~~~Tr~yAKRQ~-TWfr~~~~~~w~~ 302 (323)
T 3crm_A 256 GYRQVWDYLDGKLSYAEMTERGIIATRQLAKRQF-TWLRSWSHLHWMD 302 (323)
T ss_dssp THHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH-HHHHTCSSCEEEE
T ss_pred cHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-HHhCCCCCCeEec
Confidence 4999999999999999998876555555766665 5777777778875
No 240
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=20.82 E-value=33 Score=28.78 Aligned_cols=25 Identities=24% Similarity=0.412 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHHhhhC
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKLKH 331 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~nKH 331 (541)
.|.|.. |+|.|....-+..|++..|
T Consensus 18 py~C~~--Cgk~F~~~~~L~~H~r~~H 42 (102)
T 2ghf_A 18 GYECKY--CTFQTPDLNMFTFHVDSEH 42 (102)
T ss_dssp SEECSS--CSCEESCHHHHHHHHHHHC
T ss_pred CcCCCC--CCCccCCHHHHHHHHHhhC
Confidence 489985 9999999999999998666
No 241
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=20.63 E-value=51 Score=26.34 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=20.5
Q ss_pred ccccCCCCccccccchhHHHHHHhh
Q 009169 305 KYGCGAKGCTKLFHAAEFVHKHLKL 329 (541)
Q Consensus 305 K~~C~~~~CtKlFKg~eFV~KHI~n 329 (541)
.|.|.. |+|.|....-+..|+..
T Consensus 16 ~~~C~~--C~~~f~~~~~l~~H~~~ 38 (107)
T 1wjp_A 16 VYQCRL--CNAKLSSLLEQGSHERL 38 (107)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHH
T ss_pred CeECCC--CCCccCCHHHHHHHHHH
Confidence 689985 99999999999999876
Done!