Query 009171
Match_columns 541
No_of_seqs 221 out of 1680
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 20:25:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009171.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009171hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 5E-100 2E-104 825.8 56.0 493 26-538 1-542 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.7E-96 6E-101 791.8 51.5 468 25-537 64-564 (580)
3 1zpu_A Iron transport multicop 100.0 7.8E-96 3E-100 787.3 51.5 473 27-537 1-503 (534)
4 1v10_A Laccase; multicopper bl 100.0 4.4E-96 2E-100 788.4 46.9 474 23-539 18-513 (521)
5 3t6v_A Laccase; beta barrel, o 100.0 9.5E-95 3.3E-99 769.8 49.2 464 29-537 5-491 (495)
6 3pxl_A Laccase; 4-copper prote 100.0 2.3E-94 7.7E-99 766.8 49.8 464 29-538 4-492 (499)
7 1hfu_A Laccase 1; oxidoreducta 100.0 4.8E-93 1.6E-97 762.3 46.1 460 30-538 6-491 (503)
8 2q9o_A Laccase-1; multicopper 100.0 1.7E-92 5.9E-97 766.0 50.5 477 24-538 29-544 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 2.8E-87 9.7E-92 706.9 40.9 401 24-515 12-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 3.2E-86 1.1E-90 699.6 33.5 403 27-518 17-443 (451)
11 3zx1_A Oxidoreductase, putativ 100.0 1.5E-83 5E-88 679.3 42.2 408 24-516 46-481 (481)
12 3abg_A Bilirubin oxidase; clea 100.0 7.6E-84 2.6E-88 692.8 38.1 417 27-518 35-477 (534)
13 2wsd_A Spore coat protein A; o 100.0 4.4E-83 1.5E-87 686.7 40.6 426 27-518 24-512 (513)
14 3gyr_A PHS, phenoxazinone synt 100.0 2E-81 6.8E-86 692.3 40.9 442 25-519 29-594 (612)
15 3od3_A Blue copper oxidase CUE 100.0 2.1E-81 7.2E-86 662.4 37.1 413 25-514 14-488 (488)
16 3aw5_A Multicopper oxidase; be 100.0 5.8E-82 2E-86 666.0 31.8 382 50-515 28-448 (448)
17 2g23_A PHS, phenoxazinone synt 100.0 1.2E-79 4.2E-84 664.6 42.2 442 25-518 29-593 (612)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 1E-54 3.4E-59 501.0 39.6 389 22-451 15-488 (1065)
19 3g5w_A Multicopper oxidase typ 100.0 2.6E-54 9E-59 435.3 29.9 265 27-300 1-278 (318)
20 2r7e_A Coagulation factor VIII 100.0 1.2E-55 4.2E-60 489.4 11.2 239 28-282 46-314 (742)
21 2zwn_A Two-domain type laccase 100.0 1.5E-52 5.1E-57 427.0 31.7 265 27-300 2-279 (339)
22 2dv6_A Nitrite reductase; elec 100.0 6.8E-51 2.3E-55 431.7 24.4 400 25-519 25-436 (447)
23 1kbv_A ANIA, major outer membr 100.0 1E-49 3.5E-54 404.1 29.2 261 24-301 34-310 (327)
24 3kw8_A Laccase, putative coppe 100.0 6.2E-50 2.1E-54 396.1 25.8 245 23-519 2-268 (276)
25 3gdc_A Multicopper oxidase; be 100.0 1.4E-48 4.7E-53 388.8 30.1 233 25-282 31-273 (288)
26 3tas_A Small laccase, multi-co 100.0 5E-49 1.7E-53 396.4 25.3 249 21-521 6-276 (313)
27 3t9w_A Small laccase, multi-co 100.0 3.8E-49 1.3E-53 394.2 23.8 140 21-169 22-179 (299)
28 2zoo_A Probable nitrite reduct 100.0 4.2E-46 1.4E-50 394.1 28.3 261 23-301 23-300 (442)
29 2j5w_A Ceruloplasmin, ferroxid 100.0 1.2E-46 4.1E-51 433.9 21.5 390 44-519 615-1061(1065)
30 1mzy_A Copper-containing nitri 100.0 4.3E-46 1.5E-50 379.3 23.1 269 23-301 27-321 (333)
31 3cg8_A Laccase; oxidoreductase 100.0 1.1E-45 3.7E-50 376.0 25.8 243 25-519 45-309 (343)
32 1oe1_A Dissimilatory copper-co 100.0 1.7E-45 5.7E-50 375.5 23.4 267 24-301 28-321 (336)
33 2bw4_A Copper-containing nitri 100.0 2.7E-45 9.2E-50 374.6 22.0 269 23-301 33-327 (340)
34 1sdd_B Coagulation factor V; c 100.0 8.7E-41 3E-45 368.9 26.0 263 25-298 3-327 (647)
35 2dv6_A Nitrite reductase; elec 100.0 1.7E-39 5.7E-44 344.2 30.3 256 26-300 161-435 (447)
36 1sdd_A Coagulation factor V; c 100.0 5.6E-42 1.9E-46 344.1 7.5 210 48-282 50-285 (306)
37 2r7e_B Coagulation factor VIII 100.0 2.3E-40 8E-45 367.5 11.5 247 25-282 130-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 1.2E-36 4.2E-41 337.3 6.4 213 55-282 448-696 (742)
39 3gdc_A Multicopper oxidase; be 100.0 2.6E-30 8.8E-35 257.0 14.8 231 192-516 54-288 (288)
40 3g5w_A Multicopper oxidase typ 100.0 2.5E-29 8.5E-34 253.1 15.7 247 193-518 23-278 (318)
41 2zwn_A Two-domain type laccase 100.0 4.6E-29 1.6E-33 253.8 17.1 246 192-518 23-279 (339)
42 1sdd_A Coagulation factor V; c 99.9 1.8E-25 6E-30 224.1 1.5 233 194-517 51-301 (306)
43 2bw4_A Copper-containing nitri 99.9 6.5E-22 2.2E-26 201.5 19.6 258 192-519 59-327 (340)
44 1kbv_A ANIA, major outer membr 99.9 6.4E-22 2.2E-26 200.1 18.4 247 193-519 59-310 (327)
45 1sdd_B Coagulation factor V; c 99.9 4E-22 1.4E-26 219.8 18.2 247 198-516 63-327 (647)
46 1mzy_A Copper-containing nitri 99.9 1.4E-20 4.8E-25 191.0 19.0 261 192-519 52-321 (333)
47 2r7e_B Coagulation factor VIII 99.8 1.7E-22 5.8E-27 224.4 4.5 243 203-515 198-455 (770)
48 2zoo_A Probable nitrite reduct 99.8 1.4E-19 4.9E-24 190.9 17.4 248 192-519 48-300 (442)
49 1oe1_A Dissimilatory copper-co 99.8 8.8E-19 3E-23 178.1 21.1 258 192-519 53-321 (336)
50 2uxt_A Protein SUFI, SUFI; oxi 99.7 6.6E-15 2.3E-19 155.0 21.8 249 28-297 152-440 (451)
51 2xu9_A Laccase; oxidoreductase 99.6 5.4E-15 1.9E-19 155.4 20.6 235 27-282 145-425 (439)
52 3cvb_A Plastocyanin; cupredoxi 99.6 1.1E-16 3.8E-21 134.0 3.6 89 55-147 15-105 (105)
53 1hfu_A Laccase 1; oxidoreducta 99.6 2.9E-14 1E-18 152.2 20.6 249 30-282 143-455 (503)
54 1v10_A Laccase; multicopper bl 99.6 2.1E-14 7.1E-19 154.0 19.1 242 47-297 191-490 (521)
55 3kw8_A Laccase, putative coppe 99.6 7.5E-15 2.6E-19 144.6 11.9 99 50-150 157-268 (276)
56 3t6v_A Laccase; beta barrel, o 99.5 3.7E-13 1.3E-17 142.8 20.1 233 46-282 167-456 (495)
57 3zx1_A Oxidoreductase, putativ 99.5 8.7E-13 3E-17 139.1 19.9 235 29-282 181-466 (481)
58 3pxl_A Laccase; 4-copper prote 99.5 1.9E-12 6.5E-17 137.4 19.9 233 46-282 165-456 (499)
59 1iby_A Nitrosocyanin; RED copp 99.5 2.1E-13 7.2E-18 115.3 10.1 105 29-147 2-112 (112)
60 2cal_A Rusticyanin; iron respi 99.5 3E-13 1E-17 120.6 11.3 98 44-146 47-154 (154)
61 1zpu_A Iron transport multicop 99.4 7.5E-12 2.6E-16 134.3 23.4 230 47-282 167-466 (534)
62 1aoz_A Ascorbate oxidase; oxid 99.4 3.3E-12 1.1E-16 138.0 20.0 203 60-282 205-510 (552)
63 2q9o_A Laccase-1; multicopper 99.4 1.1E-11 3.8E-16 133.8 22.9 234 47-282 195-506 (559)
64 3aw5_A Multicopper oxidase; be 99.4 1.3E-11 4.5E-16 129.6 19.6 225 29-282 138-434 (448)
65 3od3_A Blue copper oxidase CUE 99.4 9.9E-12 3.4E-16 131.0 18.5 248 29-282 151-475 (488)
66 3cg8_A Laccase; oxidoreductase 99.4 1.1E-12 3.6E-17 133.1 10.3 104 50-155 198-314 (343)
67 1fwx_A Nitrous oxide reductase 99.3 3.1E-12 1.1E-16 136.4 10.9 95 43-149 497-594 (595)
68 2g23_A PHS, phenoxazinone synt 99.3 1.8E-10 6.3E-15 124.6 21.6 232 47-282 254-576 (612)
69 2ov0_A Amicyanin; beta-sandwic 99.3 2.6E-11 8.9E-16 101.0 10.3 78 53-146 27-105 (105)
70 3abg_A Bilirubin oxidase; clea 99.2 3.7E-11 1.3E-15 128.7 13.9 241 47-298 201-475 (534)
71 2wsd_A Spore coat protein A; o 99.2 8.3E-11 2.8E-15 125.8 16.4 229 47-297 230-509 (513)
72 3sqr_A Laccase; multicopper ox 99.2 1.7E-09 5.6E-14 116.4 21.7 230 47-282 225-529 (580)
73 2aan_A Auracyanin A; cupredoxi 99.2 2.7E-11 9.3E-16 106.4 6.0 94 415-515 36-139 (139)
74 2gim_A Plastocyanin; beta shee 99.1 8.4E-11 2.9E-15 98.1 7.9 83 58-147 19-106 (106)
75 3cvb_A Plastocyanin; cupredoxi 99.1 5E-11 1.7E-15 99.2 6.3 85 415-516 20-105 (105)
76 3tas_A Small laccase, multi-co 99.1 4E-10 1.4E-14 112.7 10.9 94 204-299 174-272 (313)
77 2aan_A Auracyanin A; cupredoxi 99.0 1.5E-09 5.1E-14 95.1 9.9 90 55-146 31-139 (139)
78 3t9w_A Small laccase, multi-co 99.0 2.4E-09 8.4E-14 106.2 12.5 100 50-150 179-290 (299)
79 3gyr_A PHS, phenoxazinone synt 99.0 1.8E-08 6E-13 110.4 18.9 89 193-282 459-576 (612)
80 1qhq_A Protein (auracyanin); e 98.9 1.1E-08 3.9E-13 89.6 12.3 91 56-147 30-140 (140)
81 4hci_A Cupredoxin 1; structura 98.9 7.5E-09 2.5E-13 85.2 8.9 79 53-146 22-100 (100)
82 2gim_A Plastocyanin; beta shee 98.8 6.1E-09 2.1E-13 86.6 7.6 84 415-515 21-105 (106)
83 2plt_A Plastocyanin; electron 98.8 5E-09 1.7E-13 85.8 5.5 80 58-146 17-98 (98)
84 3c75_A Amicyanin; copper prote 98.7 2.2E-08 7.5E-13 86.7 8.3 78 53-146 54-132 (132)
85 1pcs_A Plastocyanin; electron 98.7 2.2E-08 7.5E-13 82.0 7.7 81 58-146 18-98 (98)
86 1bxv_A Plastocyanin; copper pr 98.7 3.2E-08 1.1E-12 79.7 7.9 75 57-146 17-91 (91)
87 1qhq_A Protein (auracyanin); e 98.7 3.9E-08 1.3E-12 86.2 7.3 99 415-515 34-139 (140)
88 2plt_A Plastocyanin; electron 98.6 5.4E-08 1.9E-12 79.6 7.4 80 415-515 19-98 (98)
89 1b3i_A PETE protein, protein ( 98.6 7.1E-08 2.4E-12 78.7 7.9 76 59-146 19-97 (97)
90 1kdj_A Plastocyanin; electron 98.6 7.6E-08 2.6E-12 79.3 8.0 77 58-146 16-102 (102)
91 1pcs_A Plastocyanin; electron 98.6 3.2E-08 1.1E-12 80.9 5.7 78 415-515 20-98 (98)
92 3erx_A Pseudoazurin; copper pr 98.6 8.7E-08 3E-12 81.5 8.3 75 59-148 21-95 (123)
93 1byp_A Protein (plastocyanin); 98.6 1.8E-07 6.2E-12 76.6 9.2 76 59-146 17-99 (99)
94 1plc_A Plastocyanin; electron 98.6 1.9E-07 6.5E-12 76.4 9.1 77 58-146 16-99 (99)
95 3tu6_A Pseudoazurin (blue copp 98.6 8.2E-08 2.8E-12 82.1 7.1 77 58-149 22-98 (127)
96 1bxv_A Plastocyanin; copper pr 98.5 1.6E-07 5.4E-12 75.5 7.6 72 415-515 20-91 (91)
97 3ef4_A Pseudoazurin, blue copp 98.5 3.8E-07 1.3E-11 77.5 9.4 75 59-148 22-96 (124)
98 1b3i_A PETE protein, protein ( 98.5 9.5E-08 3.3E-12 77.9 4.3 78 415-515 20-97 (97)
99 1iby_A Nitrosocyanin; RED copp 98.4 6.6E-07 2.2E-11 75.0 8.5 74 415-516 39-112 (112)
100 1byp_A Protein (plastocyanin); 98.4 6.1E-07 2.1E-11 73.4 7.1 83 414-515 17-99 (99)
101 4hci_A Cupredoxin 1; structura 98.3 1.5E-06 5.1E-11 71.2 8.7 72 415-515 29-100 (100)
102 1iuz_A Plastocyanin; electron 98.3 7.2E-07 2.5E-11 72.8 6.5 77 58-146 17-98 (98)
103 1paz_A Pseudoazurin precursor; 98.3 1.4E-06 4.9E-11 74.1 8.4 76 58-148 20-95 (123)
104 1cuo_A Protein (azurin ISO-2); 98.3 1.4E-06 4.6E-11 74.7 7.6 92 55-147 14-129 (129)
105 1pmy_A Pseudoazurin; electron 98.3 1.6E-06 5.4E-11 73.8 7.5 76 58-148 20-95 (123)
106 1id2_A Amicyanin; beta barrel, 98.3 4.6E-06 1.6E-10 69.1 10.0 76 55-146 30-106 (106)
107 1kdj_A Plastocyanin; electron 98.2 1.5E-06 5.2E-11 71.4 6.4 85 414-515 17-102 (102)
108 3ay2_A Lipid modified azurin p 98.2 1.8E-06 6.2E-11 77.0 5.6 92 55-147 54-167 (167)
109 3sbq_A Nitrous-oxide reductase 98.1 5.4E-06 1.9E-10 86.7 8.5 89 47-148 546-638 (638)
110 2ux6_A Pseudoazurin; type-1 co 98.1 7.4E-06 2.5E-10 69.5 7.2 73 59-148 21-93 (122)
111 1plc_A Plastocyanin; electron 98.0 7.2E-06 2.4E-10 66.9 6.3 83 414-515 17-99 (99)
112 2ccw_A Azurin II, AZN-2; elect 98.0 6.1E-06 2.1E-10 70.7 5.9 92 55-147 14-129 (129)
113 2iaa_C Azurin; quinoprotein, t 97.9 1.1E-05 3.8E-10 68.9 5.3 91 55-147 13-128 (128)
114 2cal_A Rusticyanin; iron respi 97.9 1.9E-05 6.7E-10 69.9 7.0 83 414-514 61-153 (154)
115 1nwp_A Azurin; electron transp 97.9 4.6E-05 1.6E-09 65.0 9.0 91 55-146 14-128 (128)
116 2ov0_A Amicyanin; beta-sandwic 97.9 2.3E-05 7.7E-10 64.7 6.9 71 415-514 34-104 (105)
117 1fwx_A Nitrous oxide reductase 97.8 5.2E-05 1.8E-09 81.0 9.6 74 415-517 514-593 (595)
118 3fsa_A Azurin; copper, cupredo 97.2 0.0013 4.6E-08 55.2 8.9 85 56-146 15-125 (125)
119 3ef4_A Pseudoazurin, blue copp 97.2 0.00059 2E-08 57.7 6.7 76 415-519 23-98 (124)
120 3tu6_A Pseudoazurin (blue copp 97.1 0.00055 1.9E-08 58.2 5.9 75 415-518 24-98 (127)
121 1iuz_A Plastocyanin; electron 97.1 0.0016 5.4E-08 52.6 8.3 81 414-515 18-98 (98)
122 1id2_A Amicyanin; beta barrel, 97.1 0.0011 3.7E-08 54.5 6.9 71 415-514 35-105 (106)
123 3erx_A Pseudoazurin; copper pr 97.0 0.0013 4.5E-08 55.6 6.9 74 415-517 22-95 (123)
124 3c75_A Amicyanin; copper prote 96.9 0.0016 5.4E-08 55.9 6.9 72 415-515 61-132 (132)
125 2cua_A Protein (CUA); CUA cent 96.7 0.0097 3.3E-07 51.0 9.8 75 59-147 60-135 (135)
126 1paz_A Pseudoazurin precursor; 96.5 0.0045 1.5E-07 52.3 6.6 74 415-517 22-95 (123)
127 1pmy_A Pseudoazurin; electron 96.4 0.0045 1.5E-07 52.2 5.7 39 476-518 58-96 (123)
128 3s8f_B Cytochrome C oxidase su 96.3 0.021 7.3E-07 50.7 10.0 75 59-147 93-168 (168)
129 3sbq_A Nitrous-oxide reductase 96.2 0.013 4.6E-07 61.5 9.1 76 414-516 558-637 (638)
130 3ay2_A Lipid modified azurin p 95.7 0.03 1E-06 49.6 8.1 91 415-515 59-166 (167)
131 1cuo_A Protein (azurin ISO-2); 95.5 0.086 3E-06 44.6 9.8 92 414-515 18-128 (129)
132 2ux6_A Pseudoazurin; type-1 co 95.2 0.027 9.2E-07 47.3 5.8 72 415-517 22-93 (122)
133 2cua_A Protein (CUA); CUA cent 95.1 0.075 2.6E-06 45.4 8.2 70 416-515 62-134 (135)
134 2iaa_C Azurin; quinoprotein, t 94.1 0.13 4.4E-06 43.5 7.1 91 415-515 18-127 (128)
135 2ccw_A Azurin II, AZN-2; elect 93.9 0.27 9.3E-06 41.5 9.0 91 415-515 19-128 (129)
136 3s8f_B Cytochrome C oxidase su 92.8 0.4 1.4E-05 42.4 8.5 73 416-516 95-168 (168)
137 3fsa_A Azurin; copper, cupredo 92.5 0.76 2.6E-05 38.3 9.4 89 413-514 17-124 (125)
138 1nwp_A Azurin; electron transp 92.5 0.63 2.2E-05 39.2 9.0 93 414-514 18-127 (128)
139 3isy_A Bsupi, intracellular pr 84.2 9.7 0.00033 31.4 10.2 71 210-281 16-101 (120)
140 1cyx_A CYOA; electron transpor 62.4 32 0.0011 31.1 8.6 63 204-285 41-103 (205)
141 1cyx_A CYOA; electron transpor 55.4 16 0.00054 33.1 5.3 77 415-519 42-120 (205)
142 2r39_A FIXG-related protein; s 53.5 28 0.00097 28.2 6.3 46 213-268 34-81 (118)
143 3hb3_B Cytochrome C oxidase su 53.3 20 0.00067 34.6 5.9 78 414-519 189-267 (298)
144 3isy_A Bsupi, intracellular pr 49.0 1.1E+02 0.0037 25.0 11.0 73 46-129 21-99 (120)
145 2gsm_B Cytochrome C oxidase su 46.4 28 0.00096 32.8 5.8 78 414-519 171-249 (262)
146 2gsm_B Cytochrome C oxidase su 42.3 77 0.0026 29.8 8.1 62 204-284 171-232 (262)
147 2xzz_A Protein-glutamine gamma 41.8 23 0.00079 28.1 3.7 51 68-124 23-78 (102)
148 3hb3_B Cytochrome C oxidase su 40.4 87 0.003 30.0 8.2 62 204-284 189-250 (298)
149 1x9u_A Umecyanin; cupredoxin, 39.0 29 0.001 28.2 4.1 40 114-154 72-112 (116)
150 1xwv_A DER F II; beta sheets, 37.4 44 0.0015 27.6 5.1 62 58-119 24-93 (129)
151 1nep_A EPV20, BNPC2, epididyma 36.1 44 0.0015 27.6 4.8 61 59-119 26-95 (130)
152 1v54_B Cytochrome C oxidase po 35.6 43 0.0015 30.8 5.1 79 413-519 139-218 (227)
153 3idu_A Uncharacterized protein 32.5 2.1E+02 0.0071 23.5 10.2 65 207-280 28-95 (127)
154 1yew_A Particulate methane mon 31.7 86 0.0029 30.7 6.5 57 55-119 260-335 (382)
155 2r5o_A Putative ATP binding co 29.0 98 0.0033 27.2 6.2 84 194-281 53-145 (188)
156 2f1e_A Protein APAG; APAG prot 28.9 49 0.0017 27.4 3.8 65 70-148 34-106 (127)
157 1ws8_A Mavicyanin; oxidized fo 27.1 68 0.0023 25.7 4.3 39 113-152 71-109 (109)
158 1v54_B Cytochrome C oxidase po 26.9 1.6E+02 0.0054 26.9 7.3 62 204-284 140-201 (227)
159 1xvs_A Protein APAG; MCSG APC2 26.0 50 0.0017 27.3 3.3 64 70-147 33-104 (126)
160 1xq4_A Protein APAG; all beta 26.0 65 0.0022 27.1 4.1 65 70-148 38-110 (139)
161 2h7w_A Chagasin; beta-strands, 25.3 2.8E+02 0.0097 22.8 8.3 64 58-124 32-103 (131)
162 2x3c_A Toxic extracellular end 24.0 2.3E+02 0.0079 27.6 8.3 69 212-281 38-127 (343)
163 1fft_B Ubiquinol oxidase; elec 23.6 66 0.0023 31.1 4.2 77 415-519 152-230 (315)
164 2p9r_A Alpha-2-M, alpha-2-macr 22.4 58 0.002 25.3 3.0 68 208-281 13-84 (102)
165 1tza_A APAG protein, SOR45; st 21.3 58 0.002 27.2 2.9 65 70-148 33-105 (134)
166 2wtp_A ORF131 protein, CZCE; m 20.7 34 0.0012 28.4 1.3 17 60-76 72-88 (131)
167 2wtp_A ORF131 protein, CZCE; m 20.4 38 0.0013 28.1 1.5 21 204-224 71-91 (131)
168 3rfr_A PMOB; membrane, oxidore 20.1 2E+02 0.0068 28.5 6.7 51 68-120 301-368 (419)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=5e-100 Score=825.82 Aligned_cols=493 Identities=31% Similarity=0.546 Sum_probs=393.2
Q ss_pred CCeEEEEEEEEEEEeCCCCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCC-CCeeEeeCCcCCCCCCCCCCCCCC-C
Q 009171 26 DPYRSYTWTVTYGTISPFGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLD-EPFLITWNGVKQRRTTWQDGVLGT-N 103 (541)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~-q 103 (541)
+++++|+|++++..+.+||.++.+|+|||++|||+|||++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ |
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 46899999999999999999999999999999999999999999999999998 999999999999988999999999 9
Q ss_pred CccCCCCeEEEEEEecCCceeeEEcCCchhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCHHHHHHHH
Q 009171 104 CPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSHKALQKRL 183 (541)
Q Consensus 104 ~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~ 183 (541)
|+|+||++|+|+|++ +++||||||||...|+++||+|+|||++++....+++ .|+|++|+|+||+++ ....+...+
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~-~d~e~~l~l~Dw~~~--~~~~~~~~~ 156 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFH-YDGEINLLLSDWWHQ--SIHKQEVGL 156 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSC-CSEEEEEEEEEECSS--CHHHHHHHT
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCC-CCccceEEeecccCC--CHHHHHhhh
Confidence 999999999999997 8899999999999999999999999999865444553 368999999999998 444333222
Q ss_pred hcC--CCCCCCCeEEEcCCCCC-------------------------ccEEEecCCEEEEEEEEcCCCCeEEEEEcCcee
Q 009171 184 EDG--YSLPVPDALLINGHHNS-------------------------LSFTGQKGKTYKFRVSNVGIATSINFRIQGHTL 236 (541)
Q Consensus 184 ~~~--~~~~~~~~~lvNG~~~~-------------------------p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~ 236 (541)
... .....++.+||||+... +.++|++|++|||||||+|+.+.+.|+|+||+|
T Consensus 157 ~~~~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 157 SSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp TSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred hcccccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 221 12245789999999862 179999999999999999999999999999999
Q ss_pred EEEeecCcccceeeeeEEEEcCCceEEEEEEe-CCCCceeEEEEecccc-CCCcceEEEEEecCCCCC--CCCCCCCCCC
Q 009171 237 TLVEVEGAHCLQESYESIDIHVGQSVAVVVAM-HGPPKDYYIVASTRFT-KPILTTTAILHYDGSNTP--PSLPLPIAPT 312 (541)
Q Consensus 237 ~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~-~~~~g~~~i~~~~~~~-~~~~~~~ail~y~~~~~~--~~~~~p~~p~ 312 (541)
+|||+||.+++|+.++++.|+|||||||+|++ ++.+|+|+|++....+ .......|+|+|+++... +..+.|..|.
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~ 316 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPA 316 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCC
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999 4468999999987643 234678899999886531 1112222221
Q ss_pred -CcccccccccccccccCccCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCC
Q 009171 313 -YHIHWSMKQARTIRTNLTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIP 391 (541)
Q Consensus 313 -~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~ 391 (541)
++...... ..++ .+....+.+. ....++++.+.......++...|+|||++|..++.|+|.+...+++
T Consensus 317 ~~~~~~~~~--~~l~-~l~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~ 385 (552)
T 1aoz_A 317 WDDFDRSKN--FTYR-ITAAMGSPKP--------PVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLL 385 (552)
T ss_dssp TTCHHHHHH--HHTT-CCBCTTCCCC--------CSSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCT
T ss_pred ccccccccc--cccc-ccccCCCCCC--------CCCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCc
Confidence 11110000 0011 1110001111 1235677776654333345678999999999889999887766666
Q ss_pred cccccCCCCCC---------CCCCCCCCCceeEEecCCCcEEEEEEEcCCC------CCCceeecCCceEEEEecccccC
Q 009171 392 GVFDLNTIKDT---------PTPGAPAKLGASVIPTTLHDYVEIVFQNNET------SVQSWHLDGSSFYVVGYGSGTWT 456 (541)
Q Consensus 392 ~~~~~~~~~~~---------p~~~~~~~~~~~~~~~~~g~~ve~vi~N~~~------~~HP~HlHG~~F~Vl~~g~g~~~ 456 (541)
++|+.+..... +..+...+.++.++.++.|++|+|+|+|.+. +.||||||||+||||+++.|.|+
T Consensus 386 g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~ 465 (552)
T 1aoz_A 386 HAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFS 465 (552)
T ss_dssp TSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCC
T ss_pred cccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccC
Confidence 66654432211 1001223456778999999999999999873 56999999999999999988888
Q ss_pred ccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcceeEEeechhhHhhcccEEEEEEecCCccccccCCCCCChhhccC
Q 009171 457 ADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVWNLRSAIWERRYLGQELYLRVSNDERSLFTETDVPPNALFCGK 536 (541)
Q Consensus 457 ~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~ 536 (541)
+.....+|+.+|+|||||.|+++||++|||++||||.|+|||||++|++.|||++|.+... ++.++|++++.|+.
T Consensus 466 ~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~~C~~ 540 (552)
T 1aoz_A 466 AEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACGG 540 (552)
T ss_dssp GGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSHH
T ss_pred cccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchhhhhc
Confidence 7555678999999999999999999999999999999999999999999999999977442 25668999999997
Q ss_pred CC
Q 009171 537 AK 538 (541)
Q Consensus 537 ~~ 538 (541)
++
T Consensus 541 ~~ 542 (552)
T 1aoz_A 541 TA 542 (552)
T ss_dssp HH
T ss_pred cC
Confidence 65
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.7e-96 Score=791.82 Aligned_cols=468 Identities=25% Similarity=0.366 Sum_probs=371.2
Q ss_pred CCCeEEEEEEEEEEEeCCCCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCC-CCeeEeeCCcCCCCCCCCCCCCCC-
Q 009171 25 EDPYRSYTWTVTYGTISPFGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLD-EPFLITWNGVKQRRTTWQDGVLGT- 102 (541)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~- 102 (541)
.+++++|+|++++..+.+||+++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 346899999999999999999999999999999999999999999999999998 899999999999988999999999
Q ss_pred CCccCCCCeEEEEEEecCCceeeEEcCCchhhhhcceeeEEEEecCCCCCCCCCCCCCce-EEEEccccccCCCHHHHHH
Q 009171 103 NCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFGGFGAVNVAQRSVISVPYHIPDGEF-TLLVSDWFKNFSSHKALQK 181 (541)
Q Consensus 103 q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~ 181 (541)
||||+||++|+|+|++ .++||||||||...|+++||+|+|||++++. .+| |.|. +|+|+||+++ ....+..
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~~y---D~d~~~l~l~Dw~~~--~~~~~~~ 215 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPAT--ADY---DEDVGVIFLQDWAHE--SVFEIWD 215 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSS--CHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCccc--CCC---CccceEEEEEEEecC--CHHHHHH
Confidence 9999999999999997 6899999999999999999999999998653 356 7887 9999999998 4544433
Q ss_pred HHhcCCCCCCCCeEEEcCCCC----------------CccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcc
Q 009171 182 RLEDGYSLPVPDALLINGHHN----------------SLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAH 245 (541)
Q Consensus 182 ~~~~~~~~~~~~~~lvNG~~~----------------~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~ 245 (541)
.... ...+.++.+||||+.. .+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+
T Consensus 216 ~~~~-~~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~ 294 (580)
T 3sqr_A 216 TARL-GAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVP 294 (580)
T ss_dssp HHTT-SCCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred HHhc-cCCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCcc
Confidence 3322 2356789999999964 2689999999999999999999999999999999999999999
Q ss_pred cceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEeccccC----CCcceEEEEEecCCCCCCCCCCCCCCCCcccccccc
Q 009171 246 CLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTK----PILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQ 321 (541)
Q Consensus 246 ~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~ 321 (541)
++|+.+++|.|+|||||||+|++++++|+|||++.....+ ......|||+|.++.... |..+..... ..
T Consensus 295 v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~----P~~~~~~~~---~~ 367 (580)
T 3sqr_A 295 IVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIAN----PTSVGTTPR---GT 367 (580)
T ss_dssp EEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCC----CCCCCCCCC---CC
T ss_pred CCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCC----CCCCCCCcc---ch
Confidence 9999999999999999999999998889999999875432 134689999998764321 111100000 01
Q ss_pred ccccc-ccCccCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeee-CCCCccccccccCCCcccccCCC
Q 009171 322 ARTIR-TNLTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYV-NPITPLKLADWFNIPGVFDLNTI 399 (541)
Q Consensus 322 ~~~l~-~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~-~~~~P~l~~~~~~~~~~~~~~~~ 399 (541)
+.+.. ..|.+..+.+.|. ....++++.+. .++...|+|||.+|. +++.|+|++.+.+ .
T Consensus 368 ~~~~~~~~L~P~~~~~~~~------~~~~~~~l~~~-----~~~~~~w~iN~~s~~~~~~~P~L~~~~~g-------~-- 427 (580)
T 3sqr_A 368 CEDEPVASLVPHLALDVGG------YSLVDEQVSSA-----FTNYFTWTINSSSLLLDWSSPTTLKIFNN-------E-- 427 (580)
T ss_dssp SCCSCGGGCCBSSCCBCCS------EEEEEEEEEEE-----ESSSEEEEETTBCCCCCTTSCHHHHHHTT-------C--
T ss_pred hhcccccccccCCCCCCCC------ccceEEEEEec-----cCCceeEEECCEecccCCCCCchhhhhcC-------C--
Confidence 11110 1233322222221 12233333332 245678999999996 4688977643211 0
Q ss_pred CCCCCCCCCCCCceeEEecC----CCcEEEEEEEcCC--CCCCceeecCCceEEEEecccccCccc-cccCcCCCCCccc
Q 009171 400 KDTPTPGAPAKLGASVIPTT----LHDYVEIVFQNNE--TSVQSWHLDGSSFYVVGYGSGTWTADI-RKRYNLNDAITRH 472 (541)
Q Consensus 400 ~~~p~~~~~~~~~~~~~~~~----~g~~ve~vi~N~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~~-~~~~~~~~p~~rD 472 (541)
.+ ......++.++ .|++|||+|+|.+ .+.||||||||+||||++|.|.|++.. ...+|+.||++||
T Consensus 428 ~~-------~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rD 500 (580)
T 3sqr_A 428 TI-------FPTEYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRD 500 (580)
T ss_dssp CC-------CCGGGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEES
T ss_pred cc-------CCCCcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceee
Confidence 01 11233445554 6999999999988 789999999999999999999998653 3679999999999
Q ss_pred eEEeCCCCEEEEEEEcCCcceeEEeechhhHhhcccEEEEEEecCCccccccCCCCCC-hhhccCC
Q 009171 473 TVQVYPQSWSAIYVSLDNKGVWNLRSAIWERRYLGQELYLRVSNDERSLFTETDVPPN-ALFCGKA 537 (541)
Q Consensus 473 Tv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~ 537 (541)
|+.|+++||++|||++||||.|+|||||++|++.||+++|.+ .++++ .+..++|+. ...|..+
T Consensus 501 Tv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e-~~~~i-~~~~~~~~~~~~~C~~~ 564 (580)
T 3sqr_A 501 VAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVE-SQSSI-AVKMTDTAIFEDTCANW 564 (580)
T ss_dssp EEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEE-SGGGC-CCCHHHHHHHHHHHHHH
T ss_pred EEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEE-CHHHH-hhccCCcHHHHHhhHHH
Confidence 999999999999999999999999999999999999999966 55543 233334444 5678654
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-96 Score=787.32 Aligned_cols=473 Identities=24% Similarity=0.330 Sum_probs=370.3
Q ss_pred CeEEEEEEEEEEEeCCCC-eeeeEEEECCCCcCceEEEecCCEEEEEEEECCC-CCeeEeeCCcCCCCCCCCCCCCCC-C
Q 009171 27 PYRSYTWTVTYGTISPFG-VPQQGILINGQFPGPAIEAVTNDNIIVNLINKLD-EPFLITWNGVKQRRTTWQDGVLGT-N 103 (541)
Q Consensus 27 ~~~~~~l~~~~~~~~~~g-~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~-q 103 (541)
++++|+|++++..+.+|| .++++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ |
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999998 999999999999888999999999 9
Q ss_pred CccCCCCeEEEEEEecCCceeeEEcCCchhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCHHHHHH-H
Q 009171 104 CPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSHKALQK-R 182 (541)
Q Consensus 104 ~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~-~ 182 (541)
|+|+||++|+|+|++++++||||||||.+.|+++||+|+|||++++ .+..+ |+|++|+|+||+++ ....+.. +
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~-~p~~~---d~e~~l~l~Dw~~~--~~~~~~~~~ 154 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDS-FPYDY---DEELSLSLSEWYHD--LVTDLTKSF 154 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTT-CCSCC---SEEEEEEEEEECSS--CHHHHHHHH
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCC-CCCCC---cceEEEEeeccccC--CHHHHHHHH
Confidence 9999999999999986689999999999999999999999999975 23334 88999999999999 5555433 2
Q ss_pred Hh---cCCCCCCCCeEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccceeeeeEEEEcCC
Q 009171 183 LE---DGYSLPVPDALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVG 259 (541)
Q Consensus 183 ~~---~~~~~~~~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pg 259 (541)
+. .....+.++.+||||+.. +.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|+||
T Consensus 155 ~~~~~~~g~~~~~d~~liNG~~~-~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~g 233 (534)
T 1zpu_A 155 MSVYNPTGAEPIPQNLIVNNTMN-LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVA 233 (534)
T ss_dssp SSTTCTTCCCCCCSEEEETTBSS-CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTT
T ss_pred hccccCCCCCCCCceEEECCCCc-eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECcc
Confidence 22 122345789999999998 99999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEeCCC-CceeEEEEecccc-------CCCcceEEEEEecCCCCCCCCCCCCCCCCcccccccc-cccccccCc
Q 009171 260 QSVAVVVAMHGP-PKDYYIVASTRFT-------KPILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQ-ARTIRTNLT 330 (541)
Q Consensus 260 eR~dv~v~~~~~-~g~~~i~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~-~~~l~~~l~ 330 (541)
|||||+|++++. .++|+|++..... .......++|+|+++...+ .+.. ... +.. ..+. .+.
T Consensus 234 qR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p---~~~~-~~~----~~~~~~~~--~l~ 303 (534)
T 1zpu_A 234 QRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALP---TQNY-VDS----IDNFLDDF--YLQ 303 (534)
T ss_dssp CEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBC---CCCC-CSC----SSCSCCGG--GCC
T ss_pred ceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCC---CCCc-ccc----cccccccc--cce
Confidence 999999999854 4789999875422 1134678999998764211 0100 000 000 1110 122
Q ss_pred cCCCCCCCCCCCcccccceeeEEEEeccccc-cCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCC
Q 009171 331 ANAARPNPQGSFHYGTIKVVRTIVLANSATK-INNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPA 409 (541)
Q Consensus 331 ~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~-~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~ 409 (541)
+....+.+ ...+|++.+...+.. .++...|+|||++|..++.|+|++.+.. +.+. ..+. ..
T Consensus 304 p~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~-----~~~~---~~ 365 (534)
T 1zpu_A 304 PYEKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQA-----NNSE---IY 365 (534)
T ss_dssp BSSCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGT-----TCGG---GG
T ss_pred eCCCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeeccc--Cccc-----CCCc---cc
Confidence 11111111 134566666544321 2455679999999999999987654321 1110 0110 11
Q ss_pred CCceeEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEeccc----------ccCccccccCcCCCCCccceEEeCCC
Q 009171 410 KLGASVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSG----------TWTADIRKRYNLNDAITRHTVQVYPQ 479 (541)
Q Consensus 410 ~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g----------~~~~~~~~~~~~~~p~~rDTv~vpp~ 479 (541)
..++..+.++.|++|+|+|+|.+.+.||||||||+||||+++.+ .|++.....+ ..+|.|||||.|+++
T Consensus 366 ~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~-~~~p~~RDTv~V~pg 444 (534)
T 1zpu_A 366 GSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAF-PEYPMRRDTLYVRPQ 444 (534)
T ss_dssp CSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCC-CSSCEEESEEEECTT
T ss_pred CCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCccccccc-cCCCCeeeEEEeCCC
Confidence 23466789999999999999999999999999999999999864 4444322222 468999999999999
Q ss_pred CEEEEEEEcCCcceeEEeechhhHhhcccEEEEEEecCCcccccc--CCCCCC-hhhccCC
Q 009171 480 SWSAIYVSLDNKGVWNLRSAIWERRYLGQELYLRVSNDERSLFTE--TDVPPN-ALFCGKA 537 (541)
Q Consensus 480 g~~~irf~~dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~--~~~p~~-~~~c~~~ 537 (541)
+|++|||++||||.|+|||||++|++.|||++|.+.. ++.. +. .++|++ ...|..+
T Consensus 445 g~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~-~~~~-~~~~~~~p~~~~~~C~~~ 503 (534)
T 1zpu_A 445 SNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDP-FGIQ-DAHSQQLSENHLEVCQSC 503 (534)
T ss_dssp CEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECH-HHHH-HCGGGSCCHHHHHHHHHT
T ss_pred CEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECc-cccc-cccccCCChhHhhhhhcc
Confidence 9999999999999999999999999999999997643 4322 22 445554 5677554
No 4
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=4.4e-96 Score=788.38 Aligned_cols=474 Identities=22% Similarity=0.328 Sum_probs=365.6
Q ss_pred ccCCCeEEEEEEEEEEEeCCCCe-eeeEEEECCCCcCceEEEecCCEEEEEEEECCC-----CCeeEeeCCcCCCCCCCC
Q 009171 23 NAEDPYRSYTWTVTYGTISPFGV-PQQGILINGQFPGPAIEAVTNDNIIVNLINKLD-----EPFLITWNGVKQRRTTWQ 96 (541)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~-----~~~~iH~HG~~~~~~~~~ 96 (541)
++.+...+|+|++++..+.+||+ ++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++
T Consensus 18 ~~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~ 97 (521)
T 1v10_A 18 LSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEM 97 (521)
T ss_dssp ----CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGG
T ss_pred hhcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCcc
Confidence 33456678999999999999999 999999999999999999999999999999998 999999999999888999
Q ss_pred CCCCCC-CCccCCCCeEEEEEEecCCceeeEEcCCchhhhhcceeeEEEEecCCC-CCCCCCCCCCceEEEEccccccCC
Q 009171 97 DGVLGT-NCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFGGFGAVNVAQRSV-ISVPYHIPDGEFTLLVSDWFKNFS 174 (541)
Q Consensus 97 DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~~~e~~l~l~d~~~~~~ 174 (541)
||+|++ ||+|+||++|+|+|++++++||||||||.+.|+++||+|+|||++++. .+.+|+..++|++|+|+||+++.
T Consensus 98 DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~- 176 (521)
T 1v10_A 98 DGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSL- 176 (521)
T ss_dssp SCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSC-
T ss_pred CCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCC-
Confidence 999999 999999999999999878899999999999999999999999998642 12335333479999999999984
Q ss_pred CHHHHHHHHhcCCCCCCCCeEEEcCCCCC---------ccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcc
Q 009171 175 SHKALQKRLEDGYSLPVPDALLINGHHNS---------LSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAH 245 (541)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~lvNG~~~~---------p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~ 245 (541)
.+.+.. +.+...+.++.++|||+... +.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+
T Consensus 177 -~~~~~~--~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 253 (521)
T 1v10_A 177 -STVLFP--NPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS 253 (521)
T ss_dssp -CC---------CCCSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred -HHHHhh--ccCCCCCCCCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCcc
Confidence 333321 22233566899999999762 789999999999999999999999999999999999999999
Q ss_pred cceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEeccccCC---CcceEEEEEecCCCCCCCCCCCCCCCCccccccccc
Q 009171 246 CLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKP---ILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQA 322 (541)
Q Consensus 246 ~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~ 322 (541)
++|+.++++.|+|||||||+|++++.+|+|+|++....... .....++|+|+++....+...+. +..+.+
T Consensus 254 ~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~~~~~------ 326 (521)
T 1v10_A 254 HQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SGTALN------ 326 (521)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CSCBCC------
T ss_pred ccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cccccc------
Confidence 99999999999999999999999977899999998653221 12346999998865321111000 001110
Q ss_pred ccccccCccCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCC
Q 009171 323 RTIRTNLTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDT 402 (541)
Q Consensus 323 ~~l~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~ 402 (541)
. ..+.+....+.|... .....++++.+.... .+....|+|||++|..+..|+|++...+ .+..
T Consensus 327 -~--~~l~p~~~~~~p~~~---~~~~~~~~~~l~~~~--~~~~~~~~iNg~~~~~~~~P~l~~~~~g---~~~~------ 389 (521)
T 1v10_A 327 -E--ANLIPLINPGAPGNP---VPGGADINLNLRIGR--NATTADFTINGAPFIPPTVPVLLQILSG---VTNP------ 389 (521)
T ss_dssp -G--GGCCBSSCCCCSSCS---STTCSSEEEECCEEC--CSSSSCCEESSCCCCCCSSCHHHHHHHT---CCCG------
T ss_pred -h--hhcccCCcccCCCcc---cCCcceEEEEEEEec--CCceeEEEECCCcccCCCCchhhhhhcC---Cccc------
Confidence 0 122222111111110 011234455554321 1122369999999998888877654211 1100
Q ss_pred CCCCCCCCCceeEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEe-CCCCE
Q 009171 403 PTPGAPAKLGASVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQV-YPQSW 481 (541)
Q Consensus 403 p~~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v-pp~g~ 481 (541)
.....++.++.++.|++|||+++| .+.||||||||+||||+++++. .+|+.+|.|||||.| ++++|
T Consensus 390 ----~~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~gg~ 456 (521)
T 1v10_A 390 ----NDLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDN 456 (521)
T ss_dssp ----GGSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCE
T ss_pred ----ccCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCCCcE
Confidence 012245678899999999999999 7899999999999999998653 367889999999999 89999
Q ss_pred EEEEEEcCCcceeEEeechhhHhhcccEEEEEEecCCccccccCCCC-CChhhccCCCC
Q 009171 482 SAIYVSLDNKGVWNLRSAIWERRYLGQELYLRVSNDERSLFTETDVP-PNALFCGKAKR 539 (541)
Q Consensus 482 ~~irf~~dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~c~~~~~ 539 (541)
++|||++||||.|||||||++|++.|||..|.|... + +.++.++| ++.+.|..+..
T Consensus 457 v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~-~-~~~~~~~p~~~~~~C~~~~~ 513 (521)
T 1v10_A 457 VTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIP-N-IPIANAISPAWDDLCPKYNA 513 (521)
T ss_dssp EEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGG-G-HHHHSCCCHHHHTHHHHHTT
T ss_pred EEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCc-c-hhhccCCChHHhhhchhhhc
Confidence 999999999999999999999999999999987543 3 22455555 45789987653
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=9.5e-95 Score=769.79 Aligned_cols=464 Identities=23% Similarity=0.347 Sum_probs=360.9
Q ss_pred EEEEEEEEEEEeCCCCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCC-----CeeEeeCCcCCCCCCCCCCCCCC-
Q 009171 29 RSYTWTVTYGTISPFGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDE-----PFLITWNGVKQRRTTWQDGVLGT- 102 (541)
Q Consensus 29 ~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~- 102 (541)
..|+|++++..+.+||+++.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||+++.+++++||+|++
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 479999999999999999999999999999999999999999999999975 79999999999988999999999
Q ss_pred CCccCCCCeEEEEEEecCCceeeEEcCCchhhhhcceeeEEEEecCCCC-CCCCCCCCCceEEEEccccccCCCHHHHHH
Q 009171 103 NCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFGGFGAVNVAQRSVI-SVPYHIPDGEFTLLVSDWFKNFSSHKALQK 181 (541)
Q Consensus 103 q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 181 (541)
||+|+||++|+|+|++++++||||||||...|+.+||+|+|||++++.. ..+|+..++|++|+++||+++. ...+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~--~~~~-- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVL--AKEM-- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSC--GGGS--
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCc--hhhh--
Confidence 9999999999999998788999999999999999999999999986431 2234333567899999999983 3221
Q ss_pred HHhcCCCCCCCCeEEEcCCCC---------CccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccceeeee
Q 009171 182 RLEDGYSLPVPDALLINGHHN---------SLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQESYE 252 (541)
Q Consensus 182 ~~~~~~~~~~~~~~lvNG~~~---------~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p~~~d 252 (541)
.+..+..++++||||++. .+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 161 ---~~~~p~~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 237 (495)
T 3t6v_A 161 ---GAGGAITADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVD 237 (495)
T ss_dssp ---CSSSCCCCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ---ccCCCCCCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEee
Confidence 122344789999999852 36899999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCceEEEEEEeCCCCceeEEEEeccccCC---CcceEEEEEecCCCCCCCCCCCCC-CCCccccccccccccccc
Q 009171 253 SIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKP---ILTTTAILHYDGSNTPPSLPLPIA-PTYHIHWSMKQARTIRTN 328 (541)
Q Consensus 253 ~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~-p~~~~~~~~~~~~~l~~~ 328 (541)
++.|+|||||||+|++++++|+|+|++.....+. .....|+|+|+++....+...+.. +..+ ..+ ..
T Consensus 238 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~-------~~~--~~ 308 (495)
T 3t6v_A 238 EIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTKC-------LIE--TD 308 (495)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSSB-------CCG--GG
T ss_pred eEEEcCceEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCccc-------ccc--cc
Confidence 9999999999999999987799999998643322 223579999987643211110000 0000 010 12
Q ss_pred CccCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCC
Q 009171 329 LTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAP 408 (541)
Q Consensus 329 l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~ 408 (541)
|.+....+.|... ....+++++.+...+ ++ ..|+|||++|..++.|+|++... +.++.. .
T Consensus 309 L~p~~~~~~p~~~---~~~~~d~~~~l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~----------~ 368 (495)
T 3t6v_A 309 LHPLSRNGVPGNP---HQGGADCNLNLSLGF---AC-GNFVINGVSFTPPTVPVLLQICS---GANTAA----------D 368 (495)
T ss_dssp CCBSSCCCCSSCS---STTCSSEEEECCEEE---ET-TEEEETTBCCCCCSSCHHHHHHT---TCCSST----------T
T ss_pred ccccccccCCCcc---CCCCCcEEEEEEEEe---cC-cEEEEcCEecCCCCCcchhhhhc---CCcCcc----------c
Confidence 2222111111100 011245555554322 12 26999999999988998765432 111100 1
Q ss_pred CCCceeEEecCCCcEEEEEEE-cCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCC-CCEEEEEE
Q 009171 409 AKLGASVIPTTLHDYVEIVFQ-NNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYP-QSWSAIYV 486 (541)
Q Consensus 409 ~~~~~~~~~~~~g~~ve~vi~-N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp-~g~~~irf 486 (541)
......++.++.|++|||+|+ |...+.||||||||+|+||++++. ..+|+.+|.||||+.|++ |+|++|||
T Consensus 369 ~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g~-------~~~n~~~P~~rDtv~v~~~g~~~~irf 441 (495)
T 3t6v_A 369 LLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESASN-------STSNYDDPIWRDVVSIGGVGDNVTIRF 441 (495)
T ss_dssp SSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCSTTCEEEEEE
T ss_pred ccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCCC-------CCcccCCCCCccEEEcCCCCcEEEEEE
Confidence 223456889999999999998 667889999999999999987532 247889999999999997 89999999
Q ss_pred EcCCcceeEEeechhhHhhcccEEEEEEecCCccccccCCCCCC-hhhccCC
Q 009171 487 SLDNKGVWNLRSAIWERRYLGQELYLRVSNDERSLFTETDVPPN-ALFCGKA 537 (541)
Q Consensus 487 ~~dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~ 537 (541)
++||||.|+|||||++|++.|||++| ++.+++. .+..++|+. ...|..+
T Consensus 442 ~adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~-~~~~~~p~~~~~~C~~~ 491 (495)
T 3t6v_A 442 CTDNPGPWFLHCHIDWHLDAGFAIVF-AEDIPNT-ASANPVPEAWSNLCPSY 491 (495)
T ss_dssp ECCSCEEEEEEESCHHHHHTTCEEEE-EETHHHH-HHHCCCCHHHHHHHHHH
T ss_pred EcCCCeeEEEEecchhHhhcCCeEEE-EEChhHh-ccccCCCHHHHHHhhHh
Confidence 99999999999999999999999999 5566553 233444544 6788654
No 6
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=2.3e-94 Score=766.83 Aligned_cols=464 Identities=26% Similarity=0.381 Sum_probs=361.6
Q ss_pred EEEEEEEEEEEeCCCCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCC-----CeeEeeCCcCCCCCCCCCCCCCC-
Q 009171 29 RSYTWTVTYGTISPFGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDE-----PFLITWNGVKQRRTTWQDGVLGT- 102 (541)
Q Consensus 29 ~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~- 102 (541)
..|+|++++..+.+||+++.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||+++.+++++||+|++
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999974 79999999999988999999999
Q ss_pred CCccCCCCeEEEEEEecCCceeeEEcCCchhhhhcceeeEEEEecCCCC-CCCCCCCCCceEEEEccccccCCCHHHHHH
Q 009171 103 NCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFGGFGAVNVAQRSVI-SVPYHIPDGEFTLLVSDWFKNFSSHKALQK 181 (541)
Q Consensus 103 q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 181 (541)
||+|+||++|+|+|++++++||||||||...|+.+||+|+|||++++.. ..+|+..++|++|+++||+++. ...
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~--~~~--- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTA--AKL--- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSC--TTT---
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCc--ccc---
Confidence 9999999999999998788999999999999999999999999986431 2234333567899999999984 221
Q ss_pred HHhcCCCCCCCCeEEEcCCCC--------CccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccceeeeeE
Q 009171 182 RLEDGYSLPVPDALLINGHHN--------SLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQESYES 253 (541)
Q Consensus 182 ~~~~~~~~~~~~~~lvNG~~~--------~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p~~~d~ 253 (541)
.+..+..++++||||++. .+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+++
T Consensus 159 ---~~~~p~~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~ 235 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDS 235 (499)
T ss_dssp ---SCSSCSSCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESB
T ss_pred ---ccCCCCCCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeee
Confidence 122344789999999963 368999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCceEEEEEEeCCCCceeEEEEeccccCC---CcceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccCc
Q 009171 254 IDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKP---ILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLT 330 (541)
Q Consensus 254 v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~ 330 (541)
|.|+|||||||+|++++++|+|+|++.....+. .....|+|+|+++....+...+..+..+ ..+ ..|.
T Consensus 236 l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-------~~~--~~L~ 306 (499)
T 3pxl_A 236 IQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVKP-------LNE--VDLH 306 (499)
T ss_dssp EEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSSB-------CCG--GGCC
T ss_pred EEECCCcEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCcc-------ccc--cccc
Confidence 999999999999999987799999998643222 2235799999876432111000000010 010 1232
Q ss_pred cCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCC
Q 009171 331 ANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAK 410 (541)
Q Consensus 331 ~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~ 410 (541)
+....+.|... ....+++++.+...+ ++ ..|+|||++|..++.|+|++.+. +.++. ....
T Consensus 307 p~~~~~~p~~~---~~~~~d~~~~l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~----------~~~~ 366 (499)
T 3pxl_A 307 PLVSTPVPGAP---SSGGVDKAINMAFNF---NG-SNFFINGASFVPPTVPVLLQILS---GAQTA----------QDLL 366 (499)
T ss_dssp BSSCCCCSSCS---STTCSSEEEECCEEE---CS-SCEEETTBCCCCCSSCHHHHHHT---TCCST----------TTSS
T ss_pred ccccccCCCcc---cCCCCcEEEEEEEEe---cC-cEEEEcCEecCCCCCchhhhhhc---CCccc----------cccC
Confidence 22111111100 011245566555432 22 26999999999989998765432 11110 0122
Q ss_pred CceeEEecCCCcEEEEEEE---cCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCC---CCEEEE
Q 009171 411 LGASVIPTTLHDYVEIVFQ---NNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYP---QSWSAI 484 (541)
Q Consensus 411 ~~~~~~~~~~g~~ve~vi~---N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp---~g~~~i 484 (541)
....++.++.|++|||+|+ |...+.||||||||+|+||++++. ..+|+.+|.||||+.|++ ++|++|
T Consensus 367 ~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g~-------~~~n~~~P~~rDtv~v~~~~pg~~~~i 439 (499)
T 3pxl_A 367 PSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGS-------TVYNYDNPIFRDVVSTGTPAAGDNVTI 439 (499)
T ss_dssp STTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCCGGGTCEEEE
T ss_pred CCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccCC-------cccccCCCCccceEEcCCcCCCcEEEE
Confidence 3456889999999999999 566789999999999999987531 247889999999999997 999999
Q ss_pred EEEcCCcceeEEeechhhHhhcccEEEEEEecCCccccccCCCCC-ChhhccCCC
Q 009171 485 YVSLDNKGVWNLRSAIWERRYLGQELYLRVSNDERSLFTETDVPP-NALFCGKAK 538 (541)
Q Consensus 485 rf~~dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~-~~~~c~~~~ 538 (541)
||++||||.|+|||||++|++.|||++| ++.+++. .+..++|+ +...|..+.
T Consensus 440 rf~adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~-~~~~~~p~~~~~~C~~~~ 492 (499)
T 3pxl_A 440 RFDTNNPGPWFLHCHIDFHLEGGFAVVM-AEDTPDV-KAVNPVPQAWSDLCPTYD 492 (499)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTCEEEE-EESGGGH-HHHSCCCHHHHTHHHHHH
T ss_pred EEEcCCCceEEEEeCChhHhhCCCcEEE-EEChhHh-ccccCCCHHHHHhhhHhh
Confidence 9999999999999999999999999999 5666653 33344444 467896553
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=4.8e-93 Score=762.27 Aligned_cols=460 Identities=26% Similarity=0.412 Sum_probs=359.8
Q ss_pred EEEEEEEEEEeCCCCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCC-----CCeeEeeCCcCCCCCCCCCCCCCC-C
Q 009171 30 SYTWTVTYGTISPFGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLD-----EPFLITWNGVKQRRTTWQDGVLGT-N 103 (541)
Q Consensus 30 ~~~l~~~~~~~~~~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~-----~~~~iH~HG~~~~~~~~~DG~~~~-q 103 (541)
.|+|++++..+.+||+++++|+|||++ ||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ |
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 689999999999999999999999999 999999999999999999998 999999999999888999999999 9
Q ss_pred CccCCCCeEEEEEEecCCceeeEEcCCchhhhhcceeeEEEEecCCC-CCCCCCCCCCceEEEEccccccCCCHHHHHHH
Q 009171 104 CPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFGGFGAVNVAQRSV-ISVPYHIPDGEFTLLVSDWFKNFSSHKALQKR 182 (541)
Q Consensus 104 ~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~ 182 (541)
|+|+||++|+|+|++++++||||||||.+.|+++||+|+|||++++. .+.+|+..++|++|+|+||+++ ..+.+.
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~--~~~~~~-- 160 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHI--PAPSIQ-- 160 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSS--CGGGCC--
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccC--ChHHhc--
Confidence 99999999999999778899999999999999999999999998642 1234533346999999999998 343321
Q ss_pred HhcCCCCCCCCeEEEcCCCC--------CccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccceeeeeEE
Q 009171 183 LEDGYSLPVPDALLINGHHN--------SLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQESYESI 254 (541)
Q Consensus 183 ~~~~~~~~~~~~~lvNG~~~--------~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p~~~d~v 254 (541)
..+.++.+||||+.. .+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++++
T Consensus 161 -----~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l 235 (503)
T 1hfu_A 161 -----GAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRL 235 (503)
T ss_dssp --------CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBE
T ss_pred -----CCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeE
Confidence 114679999999985 2789999999999999999999999999999999999999999999999999
Q ss_pred EEcCCceEEEEEEeCCCCceeEEEEeccccCC-------CcceEEEEEecCCCCCCCCCCCCCCC-Cccccccccccccc
Q 009171 255 DIHVGQSVAVVVAMHGPPKDYYIVASTRFTKP-------ILTTTAILHYDGSNTPPSLPLPIAPT-YHIHWSMKQARTIR 326 (541)
Q Consensus 255 ~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~-------~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~l~ 326 (541)
.|+|||||||+|++++++|+|+|++....... .....++|+|+++....+.. +..|. .+.+ .
T Consensus 236 ~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~-~~~~~~~~l~-------~-- 305 (503)
T 1hfu_A 236 QIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-SANPNPAQLN-------E-- 305 (503)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC-CCCSSCCBCC-------G--
T ss_pred EEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCC-CCCCccCCCc-------c--
Confidence 99999999999999977899999998652211 12347999998765321111 10110 1111 0
Q ss_pred ccCccCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCC
Q 009171 327 TNLTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPG 406 (541)
Q Consensus 327 ~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~ 406 (541)
..|.+....+.|.... ....++++.+.... ++. .|+|||++|..+..|+|++... +.+..
T Consensus 306 ~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~~---~~~-~~~iNg~~~~~~~~P~l~~~~~---g~~~~---------- 365 (503)
T 1hfu_A 306 ADLHALIDPAAPGIPT---PGAADVNLRFQLGF---SGG-RFTINGTAYESPSVPTLLQIMS---GAQSA---------- 365 (503)
T ss_dssp GGCBBSSSCSCSSCSS---TTCSSEEEECCEEE---ETT-EEEETTBCCCCCSSCHHHHHHT---TCCSG----------
T ss_pred ccccccCccCCCCccc---CCcceEEEEEEeec---cCc-eEEECCCccCCCCCcchhhhhc---CCccc----------
Confidence 1122221111111100 01234444444321 122 6999999999888887765431 11110
Q ss_pred CCCCCceeEEecCCCcEEEEEEEc-CCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEe-CCCCEEEE
Q 009171 407 APAKLGASVIPTTLHDYVEIVFQN-NETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQV-YPQSWSAI 484 (541)
Q Consensus 407 ~~~~~~~~~~~~~~g~~ve~vi~N-~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v-pp~g~~~i 484 (541)
.....++.++.++.|++|||++.| .+.+.||||||||+||||+++++. .+++.+|.|||||.| ++++|++|
T Consensus 366 ~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~v~i 438 (503)
T 1hfu_A 366 NDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTI 438 (503)
T ss_dssp GGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEEE
T ss_pred ccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCceEEE
Confidence 012345678899999999999995 557899999999999999998653 257789999999999 99999999
Q ss_pred EEEcCCcceeEEeechhhHhhcccEEEEEEecCCccccccCCCC-CChhhccCCC
Q 009171 485 YVSLDNKGVWNLRSAIWERRYLGQELYLRVSNDERSLFTETDVP-PNALFCGKAK 538 (541)
Q Consensus 485 rf~~dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~c~~~~ 538 (541)
||++||||.|||||||++|++.|||+.|.|... + +.++.++| ++.+.|..+.
T Consensus 439 rf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~-~-~~~~~~~p~~~~~~C~~~~ 491 (503)
T 1hfu_A 439 RFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMA-N-TVDANNPPVEWAQLCEIYD 491 (503)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTCEEEEEECHH-H-HHHHCCCCHHHHHHHHHHH
T ss_pred EEEcCCCeeeeEecCchhHhhCCCeEEEEECch-h-hhhccCCChHHhhhccchh
Confidence 999999999999999999999999999988543 3 22345556 4578998654
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1.7e-92 Score=765.97 Aligned_cols=477 Identities=22% Similarity=0.326 Sum_probs=367.3
Q ss_pred cCCCeEEEEEEEEEEE--eCCCCee-eeEEEECCCCcCceEEEecCCEEEEEEEECC-CCCeeEeeCCcCCCCCCCCCCC
Q 009171 24 AEDPYRSYTWTVTYGT--ISPFGVP-QQGILINGQFPGPAIEAVTNDNIIVNLINKL-DEPFLITWNGVKQRRTTWQDGV 99 (541)
Q Consensus 24 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DG~ 99 (541)
+.+++++|+|++++.+ +.+||++ +.+|+|||++|||+|||++||+|+|+|+|+| +++++|||||+++.+++++||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 3566899999999999 8899999 9999999999999999999999999999999 6899999999999888999999
Q ss_pred CCC-CCccCC-CCeEEEEEEecCCceeeEEcCCchhhhhcceeeEEEEecCCCCCCCCCCCCCce-EEEEccccccCCCH
Q 009171 100 LGT-NCPIPP-NSNWTYKFQMKDQIGTFNYFPSTKVHRAFGGFGAVNVAQRSVISVPYHIPDGEF-TLLVSDWFKNFSSH 176 (541)
Q Consensus 100 ~~~-q~~i~p-G~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~ 176 (541)
|++ ||+|+| |++|+|+|++ .++||||||||...|+++||+|+|||++++. .+| |.|. +|+|+||+++ ..
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~~~---d~d~~~l~l~Dw~~~--~~ 180 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS--LPY---DIDLGVFPITDYYYR--AA 180 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSS--CH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCc--CCC---cccceEEEEeccccC--CH
Confidence 999 999999 9999999997 6799999999999999999999999998653 345 7787 9999999999 45
Q ss_pred HHHHHHHhcCCCCCCCCeEEEcCCCC--------CccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccce
Q 009171 177 KALQKRLEDGYSLPVPDALLINGHHN--------SLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQ 248 (541)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~lvNG~~~--------~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p 248 (541)
+.+..... ....+.++.++|||+.. .+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|
T Consensus 181 ~~~~~~~~-~~~~~~~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p 259 (559)
T 2q9o_A 181 DDLVHFTQ-NNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNA 259 (559)
T ss_dssp HHHHHHHT-TSCCCCBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred HHHhhhhh-cCCCCccceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCc
Confidence 55432222 22345689999999984 2689999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEcCCceEEEEEEeCCCCceeEEEEec--cc---cCCCcceEEEEEecCCCCCCCCCCCCCCCCcccccccccc
Q 009171 249 ESYESIDIHVGQSVAVVVAMHGPPKDYYIVAST--RF---TKPILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQAR 323 (541)
Q Consensus 249 ~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~--~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~ 323 (541)
+.++++.|+|||||||+|++++.+|.|+|++.. .. ........++|+|.++....+...+. +.. +. .+.
T Consensus 260 ~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~-~~~--~~---~~~ 333 (559)
T 2q9o_A 260 MTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGT-PPV--DH---QCL 333 (559)
T ss_dssp EEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCC-CCC--CC---TTC
T ss_pred eEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCC-cCC--Cc---ccc
Confidence 999999999999999999999778999999986 21 12234568999998764311111100 000 00 000
Q ss_pred cccccCccCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeC-CCCccccccccCCCcccccCCCCCC
Q 009171 324 TIRTNLTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVN-PITPLKLADWFNIPGVFDLNTIKDT 402 (541)
Q Consensus 324 ~l~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~-~~~P~l~~~~~~~~~~~~~~~~~~~ 402 (541)
+. ..+.+..+.+.|.... ....++++.+.... ...+...|+|||++|.. +..|+|.....+..
T Consensus 334 ~~-~~l~p~~~~~~p~~~~---~~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~----------- 397 (559)
T 2q9o_A 334 DT-LDVRPVVPRSVPVNSF---VKRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGNT----------- 397 (559)
T ss_dssp CC-SCCCBSSCCBCCCTTC---CCCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTCC-----------
T ss_pred cc-cccccCCCCCCCCccc---ccceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCCc-----------
Confidence 00 1222221111111110 11123344443321 12345679999999975 46787654321100
Q ss_pred CCCCCCCCCceeEEecCC-CcEEEEEEEcCC----CCCCceeecCCceEEEEecc---------cccCccc-cccCcCCC
Q 009171 403 PTPGAPAKLGASVIPTTL-HDYVEIVFQNNE----TSVQSWHLDGSSFYVVGYGS---------GTWTADI-RKRYNLND 467 (541)
Q Consensus 403 p~~~~~~~~~~~~~~~~~-g~~ve~vi~N~~----~~~HP~HlHG~~F~Vl~~g~---------g~~~~~~-~~~~~~~~ 467 (541)
....+..++.++. ++|++|+++|.+ .+.||||||||+||||+++. |.|++.. ...+|+.+
T Consensus 398 -----~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~ 472 (559)
T 2q9o_A 398 -----SYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDN 472 (559)
T ss_dssp -----CCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBS
T ss_pred -----cCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCC
Confidence 0123455666764 678888999976 78999999999999999987 6776531 34588999
Q ss_pred CCccceEEeCCCCEEEEEEEcCCcceeEEeechhhHhhcccEEEEEEecCCccccccCCC--CC-ChhhccCCC
Q 009171 468 AITRHTVQVYPQSWSAIYVSLDNKGVWNLRSAIWERRYLGQELYLRVSNDERSLFTETDV--PP-NALFCGKAK 538 (541)
Q Consensus 468 p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~--p~-~~~~c~~~~ 538 (541)
|+|||||.|++++|++|||++||||.|||||||++|++.|||++|.|.. ++ +.+..++ |+ ..+.|..++
T Consensus 473 p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~-~~-~~~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 473 PPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERP-AD-LRQRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp CCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECH-HH-HGGGCCHHHHHHHHHHHHHHH
T ss_pred CCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECc-ch-hhhccccCCchhhhhhccccc
Confidence 9999999999999999999999999999999999999999999997754 33 2234433 54 568997653
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=2.8e-87 Score=706.86 Aligned_cols=401 Identities=23% Similarity=0.311 Sum_probs=327.1
Q ss_pred cCCCeEEEEEEEEEEEeCCCCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCC
Q 009171 24 AEDPYRSYTWTVTYGTISPFGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTN 103 (541)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q 103 (541)
+.+++++|+|++++..+.++|+++.+|+|||++|||+|||++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~--- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF--- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---
Confidence 35578999999999999999999999999999999999999999999999999999999999999886 5899987
Q ss_pred CccCCCCeEEEEEEec-CCceeeEEcCCch----hhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCC---
Q 009171 104 CPIPPNSNWTYKFQMK-DQIGTFNYFPSTK----VHRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSS--- 175 (541)
Q Consensus 104 ~~i~pG~~~~y~f~~~-~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~--- 175 (541)
++|+||++|+|+|+++ +++||||||||.+ .|+++||+|+|||++++... +....++|++|+++||+++.+.
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCcCC
Confidence 6799999999999985 4799999999984 79999999999999865321 1112378999999999998310
Q ss_pred HHHHHHHHhcCCCCCCCCeEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCccc-ceeeeeEE
Q 009171 176 HKALQKRLEDGYSLPVPDALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHC-LQESYESI 254 (541)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~-~p~~~d~v 254 (541)
..... .. .+..++.++|||+.. |.++|++| +|||||||+|+.+.+.|+|+||+|+||++||+++ +|+.++++
T Consensus 166 ~~~~~-~~----~g~~~~~~~iNG~~~-p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l 238 (439)
T 2xu9_A 166 HTPMD-WM----NGKEGDLVLVNGALR-PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSEL 238 (439)
T ss_dssp CCHHH-HH----HCCCCSEEEETTEES-CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCE
T ss_pred CCccc-cc----cCCCCCEEEECCccC-CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceE
Confidence 00011 00 123568999999998 99999999 9999999999999999999999999999999997 89999999
Q ss_pred EEcCCceEEEEEEeCCCCceeEEEEeccccCC------------------CcceEEEEEecCCCCCCCCCCCCCCCCccc
Q 009171 255 DIHVGQSVAVVVAMHGPPKDYYIVASTRFTKP------------------ILTTTAILHYDGSNTPPSLPLPIAPTYHIH 316 (541)
Q Consensus 255 ~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~------------------~~~~~ail~y~~~~~~~~~~~p~~p~~~~~ 316 (541)
.|+|||||||+|++++ +|+|+|++....... .....++++|.+...+ .++|..
T Consensus 239 ~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~p~~------ 309 (439)
T 2xu9_A 239 LLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP--LPLPKA------ 309 (439)
T ss_dssp EECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC--CCCCSC------
T ss_pred EECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc--ccCccc------
Confidence 9999999999999995 899999997542211 1246788888765421 112210
Q ss_pred ccccccccccccCccCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCccccc
Q 009171 317 WSMKQARTIRTNLTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDL 396 (541)
Q Consensus 317 ~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~ 396 (541)
+.+....+.+ ..+|++.|.... .+ ..|+|||++|..+..+
T Consensus 310 ------------l~~~~~l~~~---------~~~r~~~l~~~~---~g-~~~~iNg~~~~~~~~~--------------- 349 (439)
T 2xu9_A 310 ------------LSPFPTLPAP---------VVTRRLVLTEDM---MA-ARFFINGQVFDHRRVD--------------- 349 (439)
T ss_dssp ------------CCCCCCCCCC---------SEEEEEEEEEEG---GG-TEEEETTBCCCTTCCC---------------
T ss_pred ------------CCCcccCCCC---------CcceEEEEEeec---cC-ceEeECCEECCCCCCc---------------
Confidence 1000001111 124777776533 11 2699999998543211
Q ss_pred CCCCCCCCCCCCCCCceeEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEe
Q 009171 397 NTIKDTPTPGAPAKLGASVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQV 476 (541)
Q Consensus 397 ~~~~~~p~~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~v 476 (541)
+.++.|++++|+|.|.+.+.||||||||+||||+++++.+ .+|.|||||.|
T Consensus 350 -------------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~----------~~p~~rDTv~v 400 (439)
T 2xu9_A 350 -------------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF----------PYRAWKDVVNL 400 (439)
T ss_dssp -------------------EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC----------SSCCCBSEEEE
T ss_pred -------------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC----------CCCCCeEEEEe
Confidence 4578999999999999999999999999999999986543 36899999999
Q ss_pred CCCCEEEEEEEcCCcceeEEeechhhHhhcccEEEEEEe
Q 009171 477 YPQSWSAIYVSLDNKGVWNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 477 pp~g~~~irf~~dnpG~w~~HCHil~H~d~GMm~~~~V~ 515 (541)
+|+++++|||++||||.|||||||++|++.|||..|+|.
T Consensus 401 ~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 401 KAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp CTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 999999999999999999999999999999999999984
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=3.2e-86 Score=699.64 Aligned_cols=403 Identities=18% Similarity=0.190 Sum_probs=321.9
Q ss_pred CeEEEEEEEEEEEeCC-CCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCc
Q 009171 27 PYRSYTWTVTYGTISP-FGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCP 105 (541)
Q Consensus 27 ~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~ 105 (541)
..++|+|++++.++++ +|+++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++.+ .+||+| ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPG--PLMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCG--GGSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCC--CCCCCC--cCc
Confidence 4578999999999998 79999999999999999999999999999999999999999999999875 499998 999
Q ss_pred cCCCCeEEEEEEecCCceeeEEcCCc----hhhhhcceeeEEEEecCCCCCCCCC--CCCCceEEEEccccccCCCHHHH
Q 009171 106 IPPNSNWTYKFQMKDQIGTFNYFPST----KVHRAFGGFGAVNVAQRSVISVPYH--IPDGEFTLLVSDWFKNFSSHKAL 179 (541)
Q Consensus 106 i~pG~~~~y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~~~e~~l~l~d~~~~~~~~~~~ 179 (541)
|+||++|+|+|++.+++||||||||. ..|+++||+|+|||++++....+++ ..++|++|+|+||+++. .+.+
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~--~~~~ 170 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDN--FGTP 170 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECT--TSCE
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCC--CCce
Confidence 99999999999986569999999998 5899999999999999754332222 24789999999999983 3221
Q ss_pred HHHHhcCCCCCCCCeEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEE-cCceeEEEeecCccc-ceeeeeEEEEc
Q 009171 180 QKRLEDGYSLPVPDALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRI-QGHTLTLVEVEGAHC-LQESYESIDIH 257 (541)
Q Consensus 180 ~~~~~~~~~~~~~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i-~~h~~~via~DG~~~-~p~~~d~v~l~ 257 (541)
. +...+.....++.++|||+.. |.++|++| +|||||||+|+.+.+.|+| +||+|+||++||+++ +|+.++++.|+
T Consensus 171 ~-~~~~~~~~~~~d~~liNG~~~-p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~ 247 (451)
T 2uxt_A 171 E-YNEPGSGGFVGDTLLVNGVQS-PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLA 247 (451)
T ss_dssp E-CCCCSSSCCCCSEEEETTEES-CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEEC
T ss_pred e-cccccCCCCcCCEEEECCccc-ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEEC
Confidence 1 111122345689999999999 99999999 9999999999999999999 899999999999997 79999999999
Q ss_pred CCceEEEEEEeCCCCceeEEEEeccccC-----------CCcceEEEEEecCCCCCCCCCCCCCCCCccccccccccccc
Q 009171 258 VGQSVAVVVAMHGPPKDYYIVASTRFTK-----------PILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIR 326 (541)
Q Consensus 258 pgeR~dv~v~~~~~~g~~~i~~~~~~~~-----------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~ 326 (541)
|||||||+|+++ .++.|+|++...... ......++++|........ .....|
T Consensus 248 pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p--------------- 310 (451)
T 2uxt_A 248 PGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLP--------------- 310 (451)
T ss_dssp TTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCC---------------
T ss_pred ceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC-ccccCc---------------
Confidence 999999999999 478999998754221 1123357788865432110 000001
Q ss_pred ccCccCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCC
Q 009171 327 TNLTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPG 406 (541)
Q Consensus 327 ~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~ 406 (541)
..|.+....+. ....+|++.|.. .|+|||++|..+..
T Consensus 311 ~~L~~~~~~~~--------~~~~~~~~~l~~---------~~~iNg~~f~~~~~-------------------------- 347 (451)
T 2uxt_A 311 MRLLPTEIMAG--------SPIRSRDISLGD---------DPGINGQLWDVNRI-------------------------- 347 (451)
T ss_dssp SCSSSSCCCCC--------CCSEEEEEEECS---------SSSBTTBCCCTTCC--------------------------
T ss_pred cccCCCCCCCC--------CCcceEEEEEee---------EEEECCEeCCCCCC--------------------------
Confidence 01211111110 123456666652 48999999854211
Q ss_pred CCCCCceeEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEE
Q 009171 407 APAKLGASVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYV 486 (541)
Q Consensus 407 ~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf 486 (541)
.+.++.|++++|+|+|. +.||||||||+||||++++.. +++.+|.|||||.| +++++|+|
T Consensus 348 --------~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~~--------~~~~~p~~rDTv~v--g~~~~i~~ 407 (451)
T 2uxt_A 348 --------DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGAM--------PFPEDRGWKDTVWV--DGQVELLV 407 (451)
T ss_dssp --------CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTBC--------CCGGGSSCBSEEEE--EEEEEEEE
T ss_pred --------cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCcC--------CCcccCCCccEEEE--CCEEEEEE
Confidence 24578999999999998 799999999999999997432 45567899999999 99999999
Q ss_pred EcCCcce----eEEeechhhHhhcccEEEEEEecCC
Q 009171 487 SLDNKGV----WNLRSAIWERRYLGQELYLRVSNDE 518 (541)
Q Consensus 487 ~~dnpG~----w~~HCHil~H~d~GMm~~~~V~~~~ 518 (541)
+|||||. |||||||++|+|.|||+.|+|.+.+
T Consensus 408 ~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 408 YFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp ECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred EeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 9999988 9999999999999999999998754
No 11
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.5e-83 Score=679.33 Aligned_cols=408 Identities=21% Similarity=0.253 Sum_probs=318.2
Q ss_pred cCCCeEEEEEEEEEEEeCC-CCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCC
Q 009171 24 AEDPYRSYTWTVTYGTISP-FGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGT 102 (541)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~ 102 (541)
+.++.++|+|++++.++++ +|+++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. +++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVP--PDQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccC--CccCCCc--
Confidence 4668899999999999996 6999999999999999999999999999999999999999999999885 7899998
Q ss_pred CCccCCCCeEEEEEEecCC-ceeeEEcCCc----hhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCHH
Q 009171 103 NCPIPPNSNWTYKFQMKDQ-IGTFNYFPST----KVHRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSHK 177 (541)
Q Consensus 103 q~~i~pG~~~~y~f~~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~ 177 (541)
||+|+||++|+|+|+++++ +||||||||. ..|+++||+|+|||++++....++ ++++ |+|+||+++. .+
T Consensus 122 q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~--~g 195 (481)
T 3zx1_A 122 HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDE--NA 195 (481)
T ss_dssp TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBT--TS
T ss_pred cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccC--CC
Confidence 9999999999999998643 7999999997 479999999999999976544343 4455 9999999983 32
Q ss_pred HHHH-HHhcCCCCCCCCeEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCccc-ceeeeeEEE
Q 009171 178 ALQK-RLEDGYSLPVPDALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHC-LQESYESID 255 (541)
Q Consensus 178 ~~~~-~~~~~~~~~~~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~-~p~~~d~v~ 255 (541)
.+.. .......+..++.++|||+.+ |.++|++|+ ||||||+|+.+.+.|+|++|+|+|||+||+++ +|+.++++.
T Consensus 196 ~~~~~~~~~~~~g~~gd~~lvNG~~~-p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~ 272 (481)
T 3zx1_A 196 QIPNNNLNDWLNGREGEFVLINGQFK-PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELF 272 (481)
T ss_dssp CCCCCCHHHHHHCCCCSEEEETTEES-CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEE
T ss_pred ccccccchhhccCCcCCEEEECCccC-ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEE
Confidence 2110 000000124678999999999 999999998 99999999999999999999999999998776 799999999
Q ss_pred EcCCceEEEEEEeCCCCceeEEEEeccccC-----CCcceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccCc
Q 009171 256 IHVGQSVAVVVAMHGPPKDYYIVASTRFTK-----PILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLT 330 (541)
Q Consensus 256 l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~-----~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~ 330 (541)
|+|||||||+|+++ .++.|.|.+...... .......++++..... +.++|. .+.
T Consensus 273 l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~lP~------------------~l~ 331 (481)
T 3zx1_A 273 LSPASRVEVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE--NVELPK------------------NLK 331 (481)
T ss_dssp ECTTCEEEEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC--CCCCCS------------------CSC
T ss_pred ECCccEEEEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCCC--CccCCc------------------ccc
Confidence 99999999999999 478899987543210 0112233333322111 011221 111
Q ss_pred cCCCCCCCCCCCcccccceeeEEEEeccccccC-----CE--------EEEEEcCeeeeCCCCccccccccCCCcccccC
Q 009171 331 ANAARPNPQGSFHYGTIKVVRTIVLANSATKIN-----NK--------LRYAVNGISYVNPITPLKLADWFNIPGVFDLN 397 (541)
Q Consensus 331 ~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~-----g~--------~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~ 397 (541)
+....+ .....|++.|...+.... +. ..|+|||+.|... .
T Consensus 332 ~~~~~~---------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~-~----------------- 384 (481)
T 3zx1_A 332 IFKPSE---------EPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLK-R----------------- 384 (481)
T ss_dssp CCCCCC---------CCCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCTT-C-----------------
T ss_pred CCCCCC---------CCCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCCC-C-----------------
Confidence 111111 112567777754321000 01 1399999987421 1
Q ss_pred CCCCCCCCCCCCCCceeEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEe--cccccCccccccCcCCCCCccceEE
Q 009171 398 TIKDTPTPGAPAKLGASVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGY--GSGTWTADIRKRYNLNDAITRHTVQ 475 (541)
Q Consensus 398 ~~~~~p~~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~--g~g~~~~~~~~~~~~~~p~~rDTv~ 475 (541)
..+.++.|++|+|+|.|.+.+.|||||||+.|||+++ ++... ...++.|||||.
T Consensus 385 ----------------~~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~--------~~~~~~~kDTv~ 440 (481)
T 3zx1_A 385 ----------------IDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQ--------KAEFRALRDTIN 440 (481)
T ss_dssp ----------------CCEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEEE--------ECSSCCEESEEE
T ss_pred ----------------ceEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCCC--------CcccCcccceEE
Confidence 1246788999999999999999999999999999999 43221 123578999999
Q ss_pred eCCCCEEEEEEEcCCcceeEEeechhhHhhcccEEEEEEec
Q 009171 476 VYPQSWSAIYVSLDNKGVWNLRSAIWERRYLGQELYLRVSN 516 (541)
Q Consensus 476 vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GMm~~~~V~~ 516 (541)
|+|+++++|+|+|||||.|||||||++|+|.|||..|+|.+
T Consensus 441 v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~~ 481 (481)
T 3zx1_A 441 VRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE 481 (481)
T ss_dssp ECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEEC
T ss_pred ECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEeC
Confidence 99999999999999999999999999999999999999963
No 12
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=7.6e-84 Score=692.78 Aligned_cols=417 Identities=13% Similarity=0.125 Sum_probs=325.4
Q ss_pred CeEEEEEEEEEEE--eCCCCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCC
Q 009171 27 PYRSYTWTVTYGT--ISPFGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNC 104 (541)
Q Consensus 27 ~~~~~~l~~~~~~--~~~~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~ 104 (541)
.+++|+|++++.. +.++|.++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. +.+||++ ||
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~~--~~ 110 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSR--AAFDGWA--ED 110 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCC--TTTTTCS--SS
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCC--CCCCCCC--CC
Confidence 3578999999755 5678989999999999999999999999999999999999999999999886 5699987 89
Q ss_pred ccCCCCeEEEEEEecCCceeeEEcCCch----hhhhcceeeEEEEecCCCCCCCCCC--CCCceEEEEccccccCCCHHH
Q 009171 105 PIPPNSNWTYKFQMKDQIGTFNYFPSTK----VHRAFGGFGAVNVAQRSVISVPYHI--PDGEFTLLVSDWFKNFSSHKA 178 (541)
Q Consensus 105 ~i~pG~~~~y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~ 178 (541)
+|.||++|+|+|++.+++||||||||.+ .|+++||+|+|||++++....+++. .++|++|+|+||+++. .+.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~--~g~ 188 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTA--NGN 188 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCS--SSC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecC--CCc
Confidence 9999999999999766689999999996 5889999999999998655444432 3678999999999883 322
Q ss_pred HHHHHhcC-CCCCCCCeEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcC-------ceeEEEeecCcc-ccee
Q 009171 179 LQKRLEDG-YSLPVPDALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQG-------HTLTLVEVEGAH-CLQE 249 (541)
Q Consensus 179 ~~~~~~~~-~~~~~~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~-------h~~~via~DG~~-~~p~ 249 (541)
+.. ..+ .....++.++|||+.. |.++|++ ++|||||||+|+.+.+.|+|++ |+|+|||+||++ .+|+
T Consensus 189 ~~~--~~~~~~~~~gd~~lvNG~~~-p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~ 264 (534)
T 3abg_A 189 LVT--TNGELNSFWGDVIHVNGQPW-PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPA 264 (534)
T ss_dssp BCC--CTTCSSCCCCSEEEETTEES-CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEE
T ss_pred eec--cCCCCccccCceeccCCccC-ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCce
Confidence 210 111 1234579999999999 9999998 5899999999999999999987 999999999985 5899
Q ss_pred eeeEEEEcCCceEEEEEEeCCCCc-eeEEEEeccc-c-----CCCcceEEEEEecCCCCCCCCCCCCCCCCccccccccc
Q 009171 250 SYESIDIHVGQSVAVVVAMHGPPK-DYYIVASTRF-T-----KPILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQA 322 (541)
Q Consensus 250 ~~d~v~l~pgeR~dv~v~~~~~~g-~~~i~~~~~~-~-----~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~ 322 (541)
.++++.|+|||||||+|++++.+| +|+|++.... . .......++++|.....+........|
T Consensus 265 ~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P----------- 333 (534)
T 3abg_A 265 DTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP----------- 333 (534)
T ss_dssp EESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC-----------
T ss_pred EeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc-----------
Confidence 999999999999999999997667 6999874310 0 111234588888765431000000001
Q ss_pred ccccccCccCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCC
Q 009171 323 RTIRTNLTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDT 402 (541)
Q Consensus 323 ~~l~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~ 402 (541)
..|.+.. .+.+ ....+|++.+... + ..|+|||++|..+..|++
T Consensus 334 ----~~L~~~~-~p~~-------~~~~~~~~~~~~~----~--~~w~iNG~~f~~~~~p~l------------------- 376 (534)
T 3abg_A 334 ----ANLRDVP-FPSP-------TTNTPRQFRFGRT----G--PTWTINGVAFADVQNRLL------------------- 376 (534)
T ss_dssp ----CCCCCCS-CCCC-------CCCCCEEEECSCC----C--STTCCCCBTTBCTTSCCC-------------------
T ss_pred ----cccccCC-CCCC-------ccccceEEEEecc----C--ceeEECCcccCCCCCcce-------------------
Confidence 0111110 0111 1124566666532 1 258999999876544432
Q ss_pred CCCCCCCCCceeEEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCE
Q 009171 403 PTPGAPAKLGASVIPTTLHDYVEIVFQNNE-TSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSW 481 (541)
Q Consensus 403 p~~~~~~~~~~~~~~~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~ 481 (541)
..++.|++++|+|+|.+ .+.||||||||+||||+++.|.+.. ..+++.+ .|||||.|+|+++
T Consensus 377 -------------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~rDTV~v~pg~~ 439 (534)
T 3abg_A 377 -------------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GLKDVVWLGRRET 439 (534)
T ss_dssp -------------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SCBSEECCCSSEE
T ss_pred -------------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CCcCeEEcCCCCE
Confidence 24678999999999987 4699999999999999996554321 1234455 8999999999999
Q ss_pred EEEEEE-cCCcceeEEeechhhHhhcccEEEEEEecCC
Q 009171 482 SAIYVS-LDNKGVWNLRSAIWERRYLGQELYLRVSNDE 518 (541)
Q Consensus 482 ~~irf~-~dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 518 (541)
++|||+ +||||.|||||||++|++.|||+.|+|...+
T Consensus 440 v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 440 VVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp EEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 999999 8999999999999999999999999998876
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=4.4e-83 Score=686.74 Aligned_cols=426 Identities=15% Similarity=0.152 Sum_probs=322.1
Q ss_pred CeEEEEEEEEEEEeCCC--CeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCC----------------------Cee
Q 009171 27 PYRSYTWTVTYGTISPF--GVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDE----------------------PFL 82 (541)
Q Consensus 27 ~~~~~~l~~~~~~~~~~--g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~----------------------~~~ 82 (541)
+..+|+|++++...++. +.++++|+|||++|||+|||++||+|+|+|+|+|++ +++
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 45669999999887653 568999999999999999999999999999999975 899
Q ss_pred EeeCCcCCCCCCCCCCCCC--C-CCccCCCCeE---EEEEEecCCceeeEEcCCch----hhhhcceeeEEEEecCCCCC
Q 009171 83 ITWNGVKQRRTTWQDGVLG--T-NCPIPPNSNW---TYKFQMKDQIGTFNYFPSTK----VHRAFGGFGAVNVAQRSVIS 152 (541)
Q Consensus 83 iH~HG~~~~~~~~~DG~~~--~-q~~i~pG~~~---~y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~ 152 (541)
|||||+++. +++||+|+ + ||+|+||++| +|+|++.+++||||||||.+ .|+++||+|+|||++++..+
T Consensus 104 iHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 999999886 67999996 4 8999999555 99999766799999999996 48999999999999976544
Q ss_pred CCCCCCCCceEEEEccccccCCCHHHHHHHHh-----------cCCCCCCCCeEEEcCCCCCccEEEecCCEEEEEEEEc
Q 009171 153 VPYHIPDGEFTLLVSDWFKNFSSHKALQKRLE-----------DGYSLPVPDALLINGHHNSLSFTGQKGKTYKFRVSNV 221 (541)
Q Consensus 153 ~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~lvNG~~~~p~l~v~~G~~~rlRliNa 221 (541)
.+++..++|++|+|+||+++. .+.+..... .......++.+||||+.. |.++|++| +|||||||+
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~-p~~~v~~~-~~RlRliNa 257 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINE--DGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW-PYLEVEPR-KYRFRVINA 257 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECT--TSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES-CEEECCSS-EEEEEEEEC
T ss_pred ccCCCCCCcEEEEEEeeecCC--CCceecccccccccccccccccccccccceEEECCccc-ceEEecCC-EEEEEEEcc
Confidence 444455889999999999883 222110000 001234679999999999 99999985 899999999
Q ss_pred CCCCeEEEEEcCc-eeEEEeecCccc-ceeeeeEEEEcCCceEEEEEEeCCCCcee-EEEEeccccC--CCcceEEEEEe
Q 009171 222 GIATSINFRIQGH-TLTLVEVEGAHC-LQESYESIDIHVGQSVAVVVAMHGPPKDY-YIVASTRFTK--PILTTTAILHY 296 (541)
Q Consensus 222 ~~~~~~~~~i~~h-~~~via~DG~~~-~p~~~d~v~l~pgeR~dv~v~~~~~~g~~-~i~~~~~~~~--~~~~~~ail~y 296 (541)
|+.+.+.|+|++| +|+|||+||+++ +|+.++++.|+|||||||+|++++.+|.+ .+........ ......++++|
T Consensus 258 ~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~ 337 (513)
T 2wsd_A 258 SNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQF 337 (513)
T ss_dssp CSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSSCCTTTTTEEEEE
T ss_pred CCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecccccccCCCCCCcceEEE
Confidence 9999999999999 999999999998 79999999999999999999998766763 3333221100 11234578888
Q ss_pred cCCCCCCCCCCCCCCCCcccccccccccccccCccCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeee
Q 009171 297 DGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYV 376 (541)
Q Consensus 297 ~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~ 376 (541)
..+...........|. .+......+ . .....+|++.|...+.. .+...|+|||++|.
T Consensus 338 ~~~~~~~~~~~~~~p~---------------~l~~~~~~~--~-----~~~~~~~~~~l~~~~~~-~g~~~~~iNg~~~~ 394 (513)
T 2wsd_A 338 RVTKPLAQKDESRKPK---------------YLASYPSVQ--H-----ERIQNIRTLKLAGTQDE-YGRPVLLLNNKRWH 394 (513)
T ss_dssp ECCSCCSSCCCCCCCS---------------BCSCCGGGC--C-----CCEEEEEEEEEEEEECT-TSCEEEEETTBCTT
T ss_pred EeccCcccCccCCCCc---------------cccCCCCcc--c-----CCCcceEEEEEEeecCC-CCCceEeECCccCC
Confidence 7653211000001110 011000001 0 01234566766643322 34457899999874
Q ss_pred CCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEeccc---
Q 009171 377 NPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSG--- 453 (541)
Q Consensus 377 ~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g--- 453 (541)
.+ . .+.++.|++++|+|.|.+.+.||||||||+||||+++..
T Consensus 395 ~~---~--------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~ 439 (513)
T 2wsd_A 395 DP---V--------------------------------TETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIA 439 (513)
T ss_dssp SC---C--------------------------------CBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHH
T ss_pred Cc---c--------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCcccc
Confidence 32 1 124578999999999999999999999999999999753
Q ss_pred ccCccccccCcC---------CCCCccceEEeCCCCEEEEEEEc-CCcceeEEeechhhHhhcccEEEEEEecCC
Q 009171 454 TWTADIRKRYNL---------NDAITRHTVQVYPQSWSAIYVSL-DNKGVWNLRSAIWERRYLGQELYLRVSNDE 518 (541)
Q Consensus 454 ~~~~~~~~~~~~---------~~p~~rDTv~vpp~g~~~irf~~-dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 518 (541)
.|++.. .+++ .++.|||||.|+|+++++|+|+| ||||.|||||||++|++.|||..|+|.+++
T Consensus 440 ~~~~~~--~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~~ 512 (513)
T 2wsd_A 440 RYQESG--ELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDPH 512 (513)
T ss_dssp HHHHHC--CCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC-
T ss_pred cccccc--cccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCCC
Confidence 232211 1222 23569999999999999999999 799999999999999999999999997654
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=2e-81 Score=692.31 Aligned_cols=442 Identities=13% Similarity=0.088 Sum_probs=310.1
Q ss_pred CCCeEEEEEEEEEEEeCC--CCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCC----------------------
Q 009171 25 EDPYRSYTWTVTYGTISP--FGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEP---------------------- 80 (541)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~--~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~---------------------- 80 (541)
....+.|+|++++.+.++ ++.++++|+|||++|||+|||++||+|+|+|+|+|+++
T Consensus 29 ~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~ 108 (612)
T 3gyr_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccc
Confidence 345678899998877764 56789999999999999999999999999999999654
Q ss_pred -------------------eeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCch----hhhhc
Q 009171 81 -------------------FLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTK----VHRAF 137 (541)
Q Consensus 81 -------------------~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~----~q~~~ 137 (541)
++|||||+++. +.+||+| ||+|.||++|+|+|++.+++||||||||.+ .|+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCCCceEEcCCCccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 68999999885 6899988 999999999999999866789999999974 79999
Q ss_pred ceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCHHHHHH--HH-------h--------cCCCCCCCCeEEEcCC
Q 009171 138 GGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSHKALQK--RL-------E--------DGYSLPVPDALLINGH 200 (541)
Q Consensus 138 Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~--~~-------~--------~~~~~~~~~~~lvNG~ 200 (541)
||+|+|||++++....+.+.+++|++|+|+||+++. ...... .. . .......++.++|||+
T Consensus 185 Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~ 262 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDT--DEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGR 262 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEE--CTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTE
T ss_pred cceeEEEEcCccccccCCCCCCccEEEEEEEEeccc--ccccccccccccCCccccccCCCCCCccccCccCceeeecCC
Confidence 999999999976655555567899999999999873 211100 00 0 0012345689999999
Q ss_pred CCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCc-------eeEEEeecCcccc-eeee------eEEEEcCCceEEEEE
Q 009171 201 HNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGH-------TLTLVEVEGAHCL-QESY------ESIDIHVGQSVAVVV 266 (541)
Q Consensus 201 ~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h-------~~~via~DG~~~~-p~~~------d~v~l~pgeR~dv~v 266 (541)
.+ |.+.+++ ++|||||||+|+.+.+.|+|++| +|+|||+||++++ |+.+ ++|.|+|||||||+|
T Consensus 263 ~~-p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV 340 (612)
T 3gyr_A 263 IW-PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLV 340 (612)
T ss_dssp ES-CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEE
T ss_pred cc-ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEE
Confidence 99 9999976 58999999999999999999998 4999999999984 6654 489999999999999
Q ss_pred EeCCCCceeEEEEeccccCC--------CcceEEEEEecCCCCC--CCCCCCCCCCCccc---ccccccccccccCccCC
Q 009171 267 AMHGPPKDYYIVASTRFTKP--------ILTTTAILHYDGSNTP--PSLPLPIAPTYHIH---WSMKQARTIRTNLTANA 333 (541)
Q Consensus 267 ~~~~~~g~~~i~~~~~~~~~--------~~~~~ail~y~~~~~~--~~~~~p~~p~~~~~---~~~~~~~~l~~~l~~~~ 333 (541)
++++.+|.++.......... ......++++...... ....+|........ .......... .+..
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~-- 417 (612)
T 3gyr_A 341 DFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLI-VLTP-- 417 (612)
T ss_dssp ECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEE-EEEC--
T ss_pred ECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccccccccc-cccc--
Confidence 99976665544433211110 1233455555433221 11111111000000 0000000000 0000
Q ss_pred CCCCCCCCCcccccceeeEEEEecccc----------------ccCCEEEEEEcCeeeeCCCCccccccccCCCcccccC
Q 009171 334 ARPNPQGSFHYGTIKVVRTIVLANSAT----------------KINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLN 397 (541)
Q Consensus 334 ~~p~p~~~~~~~~~~~~r~~~l~~~~~----------------~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~ 397 (541)
+.... .......+.+..... .......|.+|+..|
T Consensus 418 --~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~---------------------- 468 (612)
T 3gyr_A 418 --PGTKG-----SGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTF---------------------- 468 (612)
T ss_dssp --TTCTT-----TTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECST----------------------
T ss_pred --ccccc-----ccccccccccccccccccccccccceeeeccCCCccccccccCccC----------------------
Confidence 00000 000000000000000 000111222222221
Q ss_pred CCCCCCCCCCCCCCceeEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccc----------------cc
Q 009171 398 TIKDTPTPGAPAKLGASVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADI----------------RK 461 (541)
Q Consensus 398 ~~~~~p~~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~----------------~~ 461 (541)
.....+.++.|++|+|+|+|.+.+.||||||||+||||+++++.+.... ..
T Consensus 469 -------------~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (612)
T 3gyr_A 469 -------------NDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPV 535 (612)
T ss_dssp -------------TSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEEC
T ss_pred -------------CCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCcccccccccccccccccccccc
Confidence 2233467889999999999999999999999999999999765433211 12
Q ss_pred cCcCCCCCccceEEeCCCCEEEEEEE-cCCcceeEEeechhhHhhcccEEEEEEecCCc
Q 009171 462 RYNLNDAITRHTVQVYPQSWSAIYVS-LDNKGVWNLRSAIWERRYLGQELYLRVSNDER 519 (541)
Q Consensus 462 ~~~~~~p~~rDTv~vpp~g~~~irf~-~dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 519 (541)
..+..++.|||||.|+++++++|||+ +||||.||||||||+|||.|||+.|+|++|+.
T Consensus 536 ~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 536 PLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp CCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred CcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 34567789999999999999999999 68999999999999999999999999999875
No 15
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=2.1e-81 Score=662.41 Aligned_cols=413 Identities=18% Similarity=0.217 Sum_probs=311.0
Q ss_pred CCCeEEEEEEEEEEEeCCCCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCC
Q 009171 25 EDPYRSYTWTVTYGTISPFGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNC 104 (541)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~ 104 (541)
.++.+.|+|++++.+++++|+++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. +.+||+| ||
T Consensus 14 ~~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~ 89 (488)
T 3od3_A 14 TDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QG 89 (488)
T ss_dssp CCTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCCT--TC
T ss_pred CCCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCCC--cC
Confidence 3456789999999999999999999999999999999999999999999999999999999999886 5799988 99
Q ss_pred ccCCCCeEEEEEEecCCceeeEEcCCc----hhhhhcceeeEEEEecCCCCCCCCC--CCCCceEEEEccccccCCCHHH
Q 009171 105 PIPPNSNWTYKFQMKDQIGTFNYFPST----KVHRAFGGFGAVNVAQRSVISVPYH--IPDGEFTLLVSDWFKNFSSHKA 178 (541)
Q Consensus 105 ~i~pG~~~~y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~~~e~~l~l~d~~~~~~~~~~ 178 (541)
+|.||++|+|+|++.+++||||||||. ..|+++||+|+|||++++....+++ ...+|++|+|+||+++. ++.
T Consensus 90 ~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~--~g~ 167 (488)
T 3od3_A 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSA--DGQ 167 (488)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCT--TSS
T ss_pred cCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecC--CCc
Confidence 999999999999986568999999997 4799999999999999764433322 23569999999999973 222
Q ss_pred HHHHH--hcCCCCCCCCeEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEE-cCceeEEEeecCccc-ceeeeeEE
Q 009171 179 LQKRL--EDGYSLPVPDALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRI-QGHTLTLVEVEGAHC-LQESYESI 254 (541)
Q Consensus 179 ~~~~~--~~~~~~~~~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i-~~h~~~via~DG~~~-~p~~~d~v 254 (541)
+.... .....+..++.++|||+.+ |.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||+++ +|+.+++|
T Consensus 168 ~~~~~~~~~~~~g~~gd~~lvNG~~~-p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l 245 (488)
T 3od3_A 168 IDYQLDVMTAAVGWFGDTLLTNGAIY-PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSEL 245 (488)
T ss_dssp BCCCCSHHHHHHCCCCSEEEETTBSS-CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCE
T ss_pred eeccccccccccCCCCCEEEEcCCcC-ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceE
Confidence 10000 0001134678999999998 88887 5689999999999999999999 699999999999987 79999999
Q ss_pred EEcCCceEEEEEEeCCCCceeEEEEeccccCC-----CcceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccC
Q 009171 255 DIHVGQSVAVVVAMHGPPKDYYIVASTRFTKP-----ILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNL 329 (541)
Q Consensus 255 ~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~-----~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l 329 (541)
.|+|||||||+|+++ ..+.|.+++....... ......+++......+....+|. .|
T Consensus 246 ~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~------------------~L 306 (488)
T 3od3_A 246 PVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPD------------------TL 306 (488)
T ss_dssp EECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCS------------------CC
T ss_pred EECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCc------------------cc
Confidence 999999999999999 4788999876432110 01112233322111000011111 11
Q ss_pred ccCCCCCCCCCCCcccccceeeEEEEeccc-------------------c-c---------cCCE-------------EE
Q 009171 330 TANAARPNPQGSFHYGTIKVVRTIVLANSA-------------------T-K---------INNK-------------LR 367 (541)
Q Consensus 330 ~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~-------------------~-~---------~~g~-------------~~ 367 (541)
.+....+ . ......|++.|.+.. . . ..|. ..
T Consensus 307 ~~~~~~~--~-----~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 379 (488)
T 3od3_A 307 SSLPALP--S-----LEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHA 379 (488)
T ss_dssp CCCCCCC--C-----CTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGC
T ss_pred ccCCCCc--c-----cccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccce
Confidence 1100001 0 011234555553210 0 0 0110 13
Q ss_pred EEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEecCCCcEEEEEEEcCC-CCCCceeecCCceE
Q 009171 368 YAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLHDYVEIVFQNNE-TSVQSWHLDGSSFY 446 (541)
Q Consensus 368 ~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~ 446 (541)
|+|||++|... .| .+.++.|++++|.|.|.+ .+.|||||||++|+
T Consensus 380 ~~ING~~~~~~-~~---------------------------------~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~ 425 (488)
T 3od3_A 380 NKINGQAFDMN-KP---------------------------------MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFR 425 (488)
T ss_dssp EEETTBCCCTT-CC---------------------------------SEECCBSSCEEEEEECTTCCCCEEEEETTCCBE
T ss_pred eeECCeeCCCC-CC---------------------------------ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEE
Confidence 89999988531 11 246789999999999988 67999999999999
Q ss_pred EEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcC----CcceeEEeechhhHhhcccEEEEEE
Q 009171 447 VVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLD----NKGVWNLRSAIWERRYLGQELYLRV 514 (541)
Q Consensus 447 Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d----npG~w~~HCHil~H~d~GMm~~~~V 514 (541)
|+++++.... ..++.|||||.|+ +++++|+|+|+ |||.||||||+|+|||.|||..|+|
T Consensus 426 Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 426 ILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp EEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred EeccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 9999754322 1246799999999 99999999985 4789999999999999999999976
No 16
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=5.8e-82 Score=666.03 Aligned_cols=382 Identities=18% Similarity=0.236 Sum_probs=299.7
Q ss_pred EEECCC-CcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEc
Q 009171 50 ILINGQ-FPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYF 128 (541)
Q Consensus 50 ~~~Ng~-~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH 128 (541)
|+|||+ +|||+||+++||+|+|+|+|+|+++++|||||+++. +++||+|+ |+|+||++|+|+|++++++||||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYH 103 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEec
Confidence 999999 999999999999999999999999999999999885 67999996 9999999999999986689999999
Q ss_pred CC----chhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCHHHHHHH--HhcCCCCCCCCeEEEcCCCC
Q 009171 129 PS----TKVHRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSHKALQKR--LEDGYSLPVPDALLINGHHN 202 (541)
Q Consensus 129 ~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~lvNG~~~ 202 (541)
|| ...|+++||+|+|||++++.. .+.+...+|++|+++||+++ . +.+..+ ......+..++.++|||+..
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~--~-~~~~~~~~~~~~~~~~~~~~~liNG~~~ 179 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFI--G-GAPVYNPTPMEMIAGFLGNAVLVNGVKD 179 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEE--T-TEEECCCCHHHHHHCCCCSEEEETTEET
T ss_pred cCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccC--C-CcccccccccccccCccccEEEECCccc
Confidence 99 568999999999999997653 22222238999999999998 3 221100 00011234678999999999
Q ss_pred CccEEEecCCEEEEEEEEcCCCCeEEEEE--cC---ceeEEEeecCcccc-eeeeeEEEEcCCceEEEEEEeCCCCceeE
Q 009171 203 SLSFTGQKGKTYKFRVSNVGIATSINFRI--QG---HTLTLVEVEGAHCL-QESYESIDIHVGQSVAVVVAMHGPPKDYY 276 (541)
Q Consensus 203 ~p~l~v~~G~~~rlRliNa~~~~~~~~~i--~~---h~~~via~DG~~~~-p~~~d~v~l~pgeR~dv~v~~~~~~g~~~ 276 (541)
|.++|++| +|||||||+|+.+.+.|+| ++ |+|+|||+||++++ |+.++++.|+|||||||+|+++ .+.|+
T Consensus 180 -p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~ 255 (448)
T 3aw5_A 180 -AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYL 255 (448)
T ss_dssp -CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEE
T ss_pred -ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECC--CCceE
Confidence 99999999 9999999999999999999 99 99999999999998 9999999999999999999998 47899
Q ss_pred EEEeccccC--------------CCcceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccCccCCCCCCCCCCC
Q 009171 277 IVASTRFTK--------------PILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLTANAARPNPQGSF 342 (541)
Q Consensus 277 i~~~~~~~~--------------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~ 342 (541)
|++...... ......++++|.+...... |. .|....+.+.
T Consensus 256 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~---------------~L~~lp~~~~----- 309 (448)
T 3aw5_A 256 LKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------VE---------------ALSDPPPEPP----- 309 (448)
T ss_dssp EEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------CC---------------CCSCCCCCCC-----
T ss_pred EEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------cc---------------ccCCCCCCCC-----
Confidence 998754211 1134567778865432110 10 0110000010
Q ss_pred cccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEe-cCCC
Q 009171 343 HYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIP-TTLH 421 (541)
Q Consensus 343 ~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~g 421 (541)
....+|++.|.... ..|+|||++|... .|+ +. ++.|
T Consensus 310 ---~~~~~~~~~l~~~~------~~~~iNg~~~~~~-~p~---------------------------------~~~~~~g 346 (448)
T 3aw5_A 310 ---KPTRTRRFALSLSG------MQWTINGMFWNAS-NPL---------------------------------FEHVSVE 346 (448)
T ss_dssp ---CCSEEEEEEEEEET------TEEEETTBCCCTT-CTT---------------------------------CCCEEEC
T ss_pred ---CCCceEEEEEeCCC------ceeeECCCcCCCC-CCc---------------------------------eeccCCC
Confidence 12356777776421 2599999998542 121 23 5789
Q ss_pred cEEEEEEEcCC-CCCCceeecCCceEEEEecccccCc-cccccC----cCCCCCccceEEeCCCCEEEEE--EE---cCC
Q 009171 422 DYVEIVFQNNE-TSVQSWHLDGSSFYVVGYGSGTWTA-DIRKRY----NLNDAITRHTVQVYPQSWSAIY--VS---LDN 490 (541)
Q Consensus 422 ~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~-~~~~~~----~~~~p~~rDTv~vpp~g~~~ir--f~---~dn 490 (541)
++|+|+|+|.+ .+.||||||||+||||++++ .+.. .....+ +..++.|||||.|+|+++++|+ |+ +||
T Consensus 347 ~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G-~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adn 425 (448)
T 3aw5_A 347 GVELWEIVNDKASMPHPMHLHGFPMWIIERKD-SPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQ 425 (448)
T ss_dssp EEEEEEEEECSSSCCEEEEESSSCBEEEEEES-CCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTC
T ss_pred CeEEEEEEcCCCCCCcCEEECCceEEEEEecC-CCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCC
Confidence 99999999998 89999999999999999963 3321 111122 2345579999999999999766 88 889
Q ss_pred cceeEEeechhhHhhcccEEEEEEe
Q 009171 491 KGVWNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 491 pG~w~~HCHil~H~d~GMm~~~~V~ 515 (541)
| |||||||++|++.|||..|+|.
T Consensus 426 p--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 426 L--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp E--EEEEESSHHHHHTTCEEEEEEC
T ss_pred c--EEEEcCChHHHhCCCceEEEeC
Confidence 9 9999999999999999999883
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=1.2e-79 Score=664.64 Aligned_cols=442 Identities=14% Similarity=0.123 Sum_probs=318.2
Q ss_pred CCCeEEEEEEEEEEEeCCC--CeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCC----------------------
Q 009171 25 EDPYRSYTWTVTYGTISPF--GVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEP---------------------- 80 (541)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~--g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~---------------------- 80 (541)
....++|+|++++.++.+. +.++.+|+|||++|||||+|++||+|+|+|+|+|++.
T Consensus 29 ~~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~ 108 (612)
T 2g23_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCccccc
Confidence 3457899999999988754 4689999999999999999999999999999999753
Q ss_pred -------------------eeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCch----hhhhc
Q 009171 81 -------------------FLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTK----VHRAF 137 (541)
Q Consensus 81 -------------------~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~----~q~~~ 137 (541)
+++||||+++. +.+||+| ||+|.||++++|+|++.+++||||||||.+ .|+++
T Consensus 109 ~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~--~~~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred ccccccccccccccccCCceEEEcCCCCCC--CccCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 89999999886 5699988 899999999999999766799999999997 49999
Q ss_pred ceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCHHHHH-HH------Hhc---C-C----CCCCCCeEEEcCCCC
Q 009171 138 GGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSHKALQ-KR------LED---G-Y----SLPVPDALLINGHHN 202 (541)
Q Consensus 138 Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~-~~------~~~---~-~----~~~~~~~~lvNG~~~ 202 (541)
||+|+|||++++...++++.+++|++|+|+||+++....+.+. .. .+. + . .+..++.+||||+.+
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 9999999999765444444569999999999999731111110 00 000 0 0 124679999999999
Q ss_pred CccEEEecCCEEEEEEEEcCCCCeEEEEEcCc-------eeEEEeecCccc-ceeeee------EEEEcCCceEEEEEEe
Q 009171 203 SLSFTGQKGKTYKFRVSNVGIATSINFRIQGH-------TLTLVEVEGAHC-LQESYE------SIDIHVGQSVAVVVAM 268 (541)
Q Consensus 203 ~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h-------~~~via~DG~~~-~p~~~d------~v~l~pgeR~dv~v~~ 268 (541)
|.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.++ +|.|+|||||||+|++
T Consensus 265 -p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~ 342 (612)
T 2g23_A 265 -PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDF 342 (612)
T ss_dssp -CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEEC
T ss_pred -CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEEC
Confidence 99999999 9999999999999999999999 899999999999 599999 9999999999999999
Q ss_pred CCCCc-eeEEEEeccccCC-------CcceEEEEEecC--CCCCCCCCCCCCCC---Ccccccccccccccc-cCccCCC
Q 009171 269 HGPPK-DYYIVASTRFTKP-------ILTTTAILHYDG--SNTPPSLPLPIAPT---YHIHWSMKQARTIRT-NLTANAA 334 (541)
Q Consensus 269 ~~~~g-~~~i~~~~~~~~~-------~~~~~ail~y~~--~~~~~~~~~p~~p~---~~~~~~~~~~~~l~~-~l~~~~~ 334 (541)
++.+| +|+|+........ ......++++.. .....+..+|..-. ........... +. .+.+
T Consensus 343 ~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~--r~~~~~~--- 417 (612)
T 2g23_A 343 RALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGH--RLIVLTP--- 417 (612)
T ss_dssp TTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEE--EEEEECC---
T ss_pred CCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccce--eEEeecc---
Confidence 97666 6888876421100 011113444432 22111112222000 00000000000 00 0000
Q ss_pred CCCCCCCCcccccceeeEEEEeccc---------------cccCC-EEEEEEcCeeeeCCCCccccccccCCCcccccCC
Q 009171 335 RPNPQGSFHYGTIKVVRTIVLANSA---------------TKINN-KLRYAVNGISYVNPITPLKLADWFNIPGVFDLNT 398 (541)
Q Consensus 335 ~p~p~~~~~~~~~~~~r~~~l~~~~---------------~~~~g-~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~ 398 (541)
+...+ .....+.+.+.... ...+| ...|+|||+.|..
T Consensus 418 -~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~--------------------- 470 (612)
T 2g23_A 418 -PGTKG-----SGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFND--------------------- 470 (612)
T ss_dssp -TTCTT-----STTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTS---------------------
T ss_pred -ccccc-----cccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCC---------------------
Confidence 00000 00000111111000 00012 2457788877632
Q ss_pred CCCCCCCCCCCCCceeEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCcc----------------cccc
Q 009171 399 IKDTPTPGAPAKLGASVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTAD----------------IRKR 462 (541)
Q Consensus 399 ~~~~p~~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~----------------~~~~ 462 (541)
...+.++.|++|+|+|.|.+.+.|||||||+.|+|+++++++++.. ....
T Consensus 471 --------------~~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~ 536 (612)
T 2g23_A 471 --------------GLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVP 536 (612)
T ss_dssp --------------CCCEEEETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECC
T ss_pred --------------CCceEecCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccC
Confidence 1125678999999999999999999999999999999865432210 0123
Q ss_pred CcCCCCCccceEEeCCCCEEEEEEEcC-CcceeEEeechhhHhhcccEEEEEEecCC
Q 009171 463 YNLNDAITRHTVQVYPQSWSAIYVSLD-NKGVWNLRSAIWERRYLGQELYLRVSNDE 518 (541)
Q Consensus 463 ~~~~~p~~rDTv~vpp~g~~~irf~~d-npG~w~~HCHil~H~d~GMm~~~~V~~~~ 518 (541)
++..++.|||||.|+|+++++|+|+|+ |||.|||||||++|+|.|||..|+|...+
T Consensus 537 ~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 537 LAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp CCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred CCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 455667899999999999999999999 99999999999999999999999997643
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1e-54 Score=501.01 Aligned_cols=389 Identities=16% Similarity=0.184 Sum_probs=268.1
Q ss_pred cccCCCeEEEEEEEEEEEeC--CCC--------------------------eeeeEE-------EECCC--------CcC
Q 009171 22 VNAEDPYRSYTWTVTYGTIS--PFG--------------------------VPQQGI-------LINGQ--------FPG 58 (541)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~--~~g--------------------------~~~~~~-------~~Ng~--------~pG 58 (541)
..+.+.+|+|.+.+.+..+. +.| +.+++. +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 44557899999999997753 222 233333 57877 999
Q ss_pred ceEEEecCCEEEEEEEECCCCCeeEeeCCcCCC----CCCCCCCCCC--C-CCccCCCCeEEEEEEecCC---------c
Q 009171 59 PAIEAVTNDNIIVNLINKLDEPFLITWNGVKQR----RTTWQDGVLG--T-NCPIPPNSNWTYKFQMKDQ---------I 122 (541)
Q Consensus 59 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~----~~~~~DG~~~--~-q~~i~pG~~~~y~f~~~~~---------~ 122 (541)
|+||+++||+|+|+|+|+|+++++|||||++++ +.+++||+++ + ||+|+||++|+|+|+++++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999987 4467788887 6 9999999999999998654 5
Q ss_pred eeeEEcCCchh--hhhcceeeEEEEecCCCCCCCCC-CCCCceEEEEc------cccccCCCHHHHHHHH-hcCCCC---
Q 009171 123 GTFNYFPSTKV--HRAFGGFGAVNVAQRSVISVPYH-IPDGEFTLLVS------DWFKNFSSHKALQKRL-EDGYSL--- 189 (541)
Q Consensus 123 Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~l~------d~~~~~~~~~~~~~~~-~~~~~~--- 189 (541)
||||||||.+. |+++||+|+|||++++....|.+ ..|+|++|+++ ||++.. .+..+. +++...
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~----~~~~~~~~p~~~~~~~ 250 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLED----NIKTYCSEPEKVDKDN 250 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHH----HHHHHCSCGGGCCTTC
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccc----hhhhhhcCcccccccc
Confidence 99999999984 57899999999999865433322 34789999999 565541 122221 111000
Q ss_pred ----CCCCeEEEcCCCC--CccEEEecCCEEEEEEEEcCCC-CeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceE
Q 009171 190 ----PVPDALLINGHHN--SLSFTGQKGKTYKFRVSNVGIA-TSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSV 262 (541)
Q Consensus 190 ----~~~~~~lvNG~~~--~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~ 262 (541)
..++.++|||+.. .+.++|++|++|||||+|+|.. ..+.|+|+||.|+ ++|+.+|++.|+||||+
T Consensus 251 ~~~~~~~~~~~iNG~~~~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer~ 322 (1065)
T 2j5w_A 251 EDFQQSNRMYSVNGYTFGSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATLF 322 (1065)
T ss_dssp HHHHHHTEEEEETTEETTCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBTCEE
T ss_pred ccccccCcEEEECCccCCCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCCcEE
Confidence 0235789999983 3789999999999999999986 6889999999999 35789999999999999
Q ss_pred EEEEEeCCCCceeEEEEeccccCCCcceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccCccCCC------CC
Q 009171 263 AVVVAMHGPPKDYYIVASTRFTKPILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLTANAA------RP 336 (541)
Q Consensus 263 dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~------~p 336 (541)
||+|++++ +|.|+|+|+.... ......+.++|.+...+++.+.|..+ ....+ ...++.+.+++.+... .+
T Consensus 323 dVlv~~~~-pG~y~i~~h~~~h-~~~Gm~~~~~V~~~~~~~~~~~~~g~-~~~~~-~i~A~e~~wdy~~~~~~~~~~~~~ 398 (1065)
T 2j5w_A 323 DAYMVAQN-PGEWMLSCQNLNH-LKAGLQAFFQVQECNKSSSKDNIRGK-HVRHY-YIAAEEIIWNYAPSGIDIFTKENL 398 (1065)
T ss_dssp EEEEECCS-CEEEEEEECSHHH-HHTTCEEEEEEECSCCCCCCCCCTTS-EEEEE-EEEEEEEEEESCTTSBCTTTCCBT
T ss_pred EEEEEeCC-CeeEEEEecCcch-hhCCCEEEEEEecCCCcccccccccc-ceeEE-EEeceecccccCCCCccccccccc
Confidence 99999995 8999999997522 12357888888875543333333221 01111 2345566666665432 11
Q ss_pred CCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEE
Q 009171 337 NPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVI 416 (541)
Q Consensus 337 ~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 416 (541)
.+.+++ ...+ |..+....++..+..++ ..|.+. .|..+. +..|. ......-.+++
T Consensus 399 ~~~~s~-------~~~~-l~~~~~~ig~~y~k~v~-~~y~d~--------------~f~~~~-~~~~~-~~~~g~lgpvi 453 (1065)
T 2j5w_A 399 TAPGSD-------SAVF-FEQGTTRIGGSYKKLVY-REYTDA--------------SFTNRK-ERGPE-EEHLGILGPVI 453 (1065)
T ss_dssp TCTTCT-------THHH-HCCBTTBCCSEEEEEEE-EEESST--------------TCCSBC-CCCGG-GGGGTTSCCCE
T ss_pred CCCccc-------chhh-hccCCcccCceEeeeee-ecccCC--------------ceEEcC-cCCcc-cccccccCceE
Confidence 222211 1111 22222223455555555 555321 121110 00110 00011224689
Q ss_pred ecCCCcEEEEEEEcCCCCCCceeecCCceEEEEec
Q 009171 417 PTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYG 451 (541)
Q Consensus 417 ~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g 451 (541)
.++.|++++|+|+|.....|+||+||+.|++++.|
T Consensus 454 ~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g 488 (1065)
T 2j5w_A 454 WAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEG 488 (1065)
T ss_dssp EEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCS
T ss_pred EEeCCCEEEEEEEECCCCCccCcccceeeeccCCC
Confidence 99999999999999999999999999999987764
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=2.6e-54 Score=435.27 Aligned_cols=265 Identities=22% Similarity=0.328 Sum_probs=225.1
Q ss_pred CeEEEEEEEEEEEeCC-CCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCC-CC
Q 009171 27 PYRSYTWTVTYGTISP-FGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGT-NC 104 (541)
Q Consensus 27 ~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-q~ 104 (541)
.+++|+|++++..+.+ +|..+.+|+|||++|||+|||++||+|+|+|+|.++++++|||||+++.++.++||+|++ ||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4789999999999987 488999999999999999999999999999999999999999999999877899999998 99
Q ss_pred ccCCCCeEEEEEEecCCceeeEEcCCchhh--h-hcceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCHHHHHH
Q 009171 105 PIPPNSNWTYKFQMKDQIGTFNYFPSTKVH--R-AFGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSHKALQK 181 (541)
Q Consensus 105 ~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q--~-~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 181 (541)
+|+||++++|+|++ +++||||||||.+.+ . .+||+|+|||++++..+.+. ..++|++|+++||+++. ...
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~--~~~--- 153 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSW--ANK--- 153 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGG--TTC---
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccc--ccc---
Confidence 99999999999997 689999999999844 3 58999999999875432211 33889999999998762 111
Q ss_pred HHhcCCCCCCCCeEEEcCCCC--CccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCccc-ceeeeeEEEEcC
Q 009171 182 RLEDGYSLPVPDALLINGHHN--SLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHC-LQESYESIDIHV 258 (541)
Q Consensus 182 ~~~~~~~~~~~~~~lvNG~~~--~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~-~p~~~d~v~l~p 258 (541)
....+.....++.++|||+.. .+.+++++|++|||||+|++.. .+.|||+||.|+||+.||.++ +|..+|++.|+|
T Consensus 154 ~~~~~~~~~~~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~p 232 (318)
T 3g5w_A 154 PGEGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGP 232 (318)
T ss_dssp TTCCCCTTCCCCEEEETTBCBTSSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECT
T ss_pred cccCCCCCCcCcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECC
Confidence 011122234578999999985 1349999999999999999975 679999999999999999998 689999999999
Q ss_pred CceEEEEEEeCCCCceeEEEEeccccCC-----CcceEEEEEecCCC
Q 009171 259 GQSVAVVVAMHGPPKDYYIVASTRFTKP-----ILTTTAILHYDGSN 300 (541)
Q Consensus 259 geR~dv~v~~~~~~g~~~i~~~~~~~~~-----~~~~~ail~y~~~~ 300 (541)
|||+||+++++ .||.|.++||...... .....++|+|++..
T Consensus 233 ger~~v~~~a~-~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 233 GERYDVILNMD-NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp TCEEEEEEECC-SCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred CCEEEEEEECC-CCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 99999999999 6999999999753322 14567999998864
No 20
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.2e-55 Score=489.36 Aligned_cols=239 Identities=18% Similarity=0.236 Sum_probs=184.8
Q ss_pred eEEEEEEEEEEEeCCC-CeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCC-----
Q 009171 28 YRSYTWTVTYGTISPF-GVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLG----- 101 (541)
Q Consensus 28 ~~~~~l~~~~~~~~~~-g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~----- 101 (541)
+....+.++.....+. |+++..|+ ++|||+|||++||+|+|+|+|.|+++++|||||+++. +.+||+|+
T Consensus 46 ~y~k~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~--~~~DG~p~~Dg~~ 120 (742)
T 2r7e_A 46 VYKKTLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYW--KASEGAEYDDQTS 120 (742)
T ss_dssp CEECCCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCC--SSSSCCCSSCSCC
T ss_pred EEEEEEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccC--ccccCCccCCCCc
Confidence 4444666666566655 77777664 8999999999999999999999999999999999875 45666654
Q ss_pred ---C-CCccCCCCeEEEEEEecC---------CceeeEEcCCchh--hhhcceeeEEEEecCCCCCCCCCCCCCceEEEE
Q 009171 102 ---T-NCPIPPNSNWTYKFQMKD---------QIGTFNYFPSTKV--HRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLV 166 (541)
Q Consensus 102 ---~-q~~i~pG~~~~y~f~~~~---------~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l 166 (541)
+ ||+|+||++|+|+|++++ ++||||||||.+. |+.+||+|+|||+++...........+|+++++
T Consensus 121 ~~~vtq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~ 200 (742)
T 2r7e_A 121 QREKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLF 200 (742)
T ss_dssp SSSSSSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCE
T ss_pred ccccccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEe
Confidence 5 999999999999999853 4699999999984 899999999999997543222111237888877
Q ss_pred cc------ccccCCCHHHHHHHHhcCCCCCCCCeEEEcCCCC--CccEEEecCCEEEEEEEEcCCCC-eEEEEEcCceeE
Q 009171 167 SD------WFKNFSSHKALQKRLEDGYSLPVPDALLINGHHN--SLSFTGQKGKTYKFRVSNVGIAT-SINFRIQGHTLT 237 (541)
Q Consensus 167 ~d------~~~~~~~~~~~~~~~~~~~~~~~~~~~lvNG~~~--~p~l~v~~G~~~rlRliNa~~~~-~~~~~i~~h~~~ 237 (541)
++ |+++. ....+.. +.........+.++|||+.. .+.+++++|++|||||+|+++.. .+.|||+||.|+
T Consensus 201 ~~~de~~~w~~~~-~~~~~~~-~~~~~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~ 278 (742)
T 2r7e_A 201 AVFDEGKSWHSET-KNSLMQD-RDAASARAWPKMHTVNGYVNRSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFL 278 (742)
T ss_dssp ECCCCSSSSCCCC-CC--------CCSCCCCCCCCEETTBCTBCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCE
T ss_pred ecccCCccccccc-ccccccc-CCCccccccCceEEECCccCCCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEE
Confidence 53 55542 1111110 11111223356789999973 47799999999999999999875 689999999999
Q ss_pred EEeecCcccceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEecc
Q 009171 238 LVEVEGAHCLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 238 via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 282 (541)
|++ ..+|++.|.||++++|+++++ .+|.|+++||..
T Consensus 279 Vvg--------~~~Dtv~v~Pg~~~~v~~~~~-~pG~w~~hCH~~ 314 (742)
T 2r7e_A 279 VRN--------HRQASLEISPITFLTAQTLLM-DLGQFLLFCHIS 314 (742)
T ss_dssp ETT--------EECCSCCCCTTCCCEEEECCC-SCSEECCCCCSS
T ss_pred EEe--------EecceEEeCCCcEEEEEEEeC-CCeeEEEEeCCh
Confidence 984 247899999999999999998 699999999965
No 21
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=1.5e-52 Score=427.03 Aligned_cols=265 Identities=25% Similarity=0.387 Sum_probs=224.7
Q ss_pred CeEEEEEEEEEEEeCCC-CeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCC-CC
Q 009171 27 PYRSYTWTVTYGTISPF-GVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGT-NC 104 (541)
Q Consensus 27 ~~~~~~l~~~~~~~~~~-g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-q~ 104 (541)
.+++|+|++++..+.++ |+++.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++.+.+++||+|++ ||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 46899999999999875 99999999999999999999999999999999999999999999999988889999999 99
Q ss_pred ccCCCCeEEEEEEecCCceeeEEcCCchh--hhh-cceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCHHHHHH
Q 009171 105 PIPPNSNWTYKFQMKDQIGTFNYFPSTKV--HRA-FGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSHKALQK 181 (541)
Q Consensus 105 ~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~--q~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 181 (541)
+|.||++++|+|++ +++||||||||... |+. +||+|+|||++++....+. ..++|++++++||++.. ...
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~--~~~--- 154 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAV--ADK--- 154 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGG--TTC---
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheeccc--ccc---
Confidence 99999999999997 68999999999874 888 9999999999865432221 23789999999998752 100
Q ss_pred HHhcCCCCCCCCeEEEcCCCCC--ccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccc-eeeeeEEEEcC
Q 009171 182 RLEDGYSLPVPDALLINGHHNS--LSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCL-QESYESIDIHV 258 (541)
Q Consensus 182 ~~~~~~~~~~~~~~lvNG~~~~--p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~-p~~~d~v~l~p 258 (541)
....+.....++.++|||+... +.+++++|++|||||+|+++. .+.|||+||+|+||+.||.+++ |..+|++.|+|
T Consensus 155 ~~~~g~~~~~~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~p 233 (339)
T 2zwn_A 155 YGEGGTPMNVADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSP 233 (339)
T ss_dssp TTCCCSTTSCCCEEEETTBCTTSSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECT
T ss_pred cCCCCCCccccceEEEccccCCCcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECC
Confidence 0001112225789999999861 238999999999999999965 8899999999999999999986 88999999999
Q ss_pred CceEEEEEEeCCCCceeEEEEeccccC-----CCcceEEEEEecCCC
Q 009171 259 GQSVAVVVAMHGPPKDYYIVASTRFTK-----PILTTTAILHYDGSN 300 (541)
Q Consensus 259 geR~dv~v~~~~~~g~~~i~~~~~~~~-----~~~~~~ail~y~~~~ 300 (541)
|||+||+|+++ .+|.|+++|+..... ......++|+|++..
T Consensus 234 g~r~~v~~~~~-~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 234 GERYDVIIEAD-NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp TCEEEEEEECC-SCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred CCEEEEEEEeC-CCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 99999999998 589999999965421 234457999998764
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=6.8e-51 Score=431.67 Aligned_cols=400 Identities=16% Similarity=0.137 Sum_probs=266.3
Q ss_pred CCCeEEEEEEEEEEEeCCCCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCC
Q 009171 25 EDPYRSYTWTVTYGTISPFGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNC 104 (541)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~ 104 (541)
.+.++++.+.+++..+..+| .+.+|||++ ||+|+|++||+|+|+|+|.+...+++||||.... .||
T Consensus 25 ~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~----------~~~ 90 (447)
T 2dv6_A 25 APVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAAR----------SAI 90 (447)
T ss_dssp CCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTEE----------CCC
T ss_pred CCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCcc----------cce
Confidence 34456666666655566555 345899999 9999999999999999999987799999996321 269
Q ss_pred ccCCCCeEEEEEEecCCceeeEEcCCchhhhhcceeeEEEEecCCCCCCCC--C---CCCCceEEEEccccccCCCHHHH
Q 009171 105 PIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFGGFGAVNVAQRSVISVPY--H---IPDGEFTLLVSDWFKNFSSHKAL 179 (541)
Q Consensus 105 ~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~--~---~~~~e~~l~l~d~~~~~~~~~~~ 179 (541)
+|.||++++|.|++ .++||||||||...|..+||.|.|+|+++....... . ....+++..+ |+.......-.+
T Consensus 91 ~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l 168 (447)
T 2dv6_A 91 VNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRIDL 168 (447)
T ss_dssp BCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEE
T ss_pred ecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEEE
Confidence 99999999999997 569999999999999999999999999865322110 0 0001111111 110000000000
Q ss_pred HH-HHhcC-CCCCCCCeEEEcCCCCCccEEEecCCEEEEEEEEcCC-CCeEEEEEcCceeEEEeecCcccceeeeeEEEE
Q 009171 180 QK-RLEDG-YSLPVPDALLINGHHNSLSFTGQKGKTYKFRVSNVGI-ATSINFRIQGHTLTLVEVEGAHCLQESYESIDI 256 (541)
Q Consensus 180 ~~-~~~~~-~~~~~~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~-~~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l 256 (541)
.. ..... ..+...+.+++||+...|.+++++|++|||||+|.+. ...+.++++|. ++.||.+ +++.|
T Consensus 169 ~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~------~~~~i 238 (447)
T 2dv6_A 169 ETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA------AFTQT 238 (447)
T ss_dssp EEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG------GGCCB
T ss_pred EEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC------ccEEe
Confidence 00 00000 0112346799999975599999999999999999985 34567777774 3679874 23459
Q ss_pred cCCceEEEEEEeCCCCceeEEEEecccc--CCCcceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccCccCCC
Q 009171 257 HVGQSVAVVVAMHGPPKDYYIVASTRFT--KPILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLTANAA 334 (541)
Q Consensus 257 ~pgeR~dv~v~~~~~~g~~~i~~~~~~~--~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~ 334 (541)
.||||++++++++ .+|+||++|+.... .......+.+.|.+.. .+|. .+.+..+ ...+. .... .
T Consensus 239 ~pG~~~~~~~~~~-~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~-----~~P~---~d~~~~~-~~~~~---~~~~-~ 304 (447)
T 2dv6_A 239 DPGEETVVTFKAL-IPGIYVYHCATPSVPTHITNGMYGLLLVEPEG-----GLPQ---VDREFYV-MQGEI---YTVK-S 304 (447)
T ss_dssp CTTCEEEEEEECC-SCEEEEEECCSSSHHHHHHTTCEEEEEEECTT-----CSCC---CSEEEEE-EEEEE---CBSS-C
T ss_pred CCCCEEEEEEECC-CCeEEEEEeCCCChHHHHhCCCEEEEEEeCCC-----CCCC---CCeeEEE-Eeccc---ccCC-c
Confidence 9999999999998 47999999985211 1112345677776432 1221 1111000 00000 0000 0
Q ss_pred CCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCcee
Q 009171 335 RPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGAS 414 (541)
Q Consensus 335 ~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 414 (541)
.. ..+ ...+............|.|||+.+... ...
T Consensus 305 ~~-~~g-----------~~~~~~~~~~~~~~~~~~iNG~~~~~~---------------------------------~~~ 339 (447)
T 2dv6_A 305 FG-TSG-----------EQEMDYEKLINEKPEYFLFNGSVGSLT---------------------------------RSH 339 (447)
T ss_dssp TT-CCE-----------ECCBBHHHHHTTCCSEEEETTSTTCCC---------------------------------CCC
T ss_pred cc-ccc-----------cccCChHHhhccCCCEEEECCcccCCC---------------------------------CCc
Confidence 00 000 000000000001124588999875211 113
Q ss_pred EEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEEecccccCccccccCcCCCCC-ccceEEeCCCCEEEEEEEcCCcc
Q 009171 415 VIPTTLHDYVEIVFQNNE-TSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAI-TRHTVQVYPQSWSAIYVSLDNKG 492 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~-~rDTv~vpp~g~~~irf~~dnpG 492 (541)
.+.++.|++++|+|.|.+ ...||||||||+|+||+++++.. ..|. +|||+.|+|+++++|+|+++|||
T Consensus 340 ~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~----------~~p~~~~dtv~l~pg~r~~i~~~~~~pG 409 (447)
T 2dv6_A 340 PLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVV----------SPPLIGVQTVSVPPGGATIVDFKIDRAG 409 (447)
T ss_dssp CEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSS----------SCCEEEESEEEECTTEEEEEEEECCSCE
T ss_pred ceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCccc----------CCCcccccEEEECCCcEEEEEEECCCCE
Confidence 467889999999999987 67999999999999999875321 2344 79999999999999999999999
Q ss_pred eeEEeechhhHhhcccEEEEEEecCCc
Q 009171 493 VWNLRSAIWERRYLGQELYLRVSNDER 519 (541)
Q Consensus 493 ~w~~HCHil~H~d~GMm~~~~V~~~~~ 519 (541)
.|+||||+++|++.||++.++|.+...
T Consensus 410 ~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 410 RYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp EEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred EEEEEecCcCccccCCEEEEEEeCCCC
Confidence 999999999999999999999987654
No 23
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=1e-49 Score=404.14 Aligned_cols=261 Identities=21% Similarity=0.298 Sum_probs=220.8
Q ss_pred cCCCeEEEEEEEEEEEeCC-CCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCC--CCeeEeeCCcCCCCCCCCCCCC
Q 009171 24 AEDPYRSYTWTVTYGTISP-FGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLD--EPFLITWNGVKQRRTTWQDGVL 100 (541)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DG~~ 100 (541)
+.+++++|+|++++..+++ +|.++.+|+|||++|||+|+|++||+|+|+|+|.++ .++++||||+. .+||++
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCCC
Confidence 4567899999999999987 799999999999999999999999999999999996 58999999984 368876
Q ss_pred CCCCccCCCCeEEEEEEecCCceeeEEcCCc---hhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCH-
Q 009171 101 GTNCPIPPNSNWTYKFQMKDQIGTFNYFPST---KVHRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSH- 176 (541)
Q Consensus 101 ~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~- 176 (541)
.. ..|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++..+ ..|+|++++++||+++....
T Consensus 109 ~~-~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~p----~~d~e~~l~~~d~~~~~~~~~ 182 (327)
T 1kbv_A 109 AA-TFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLP----KVDKEFYIVQGDFYTKGKKGA 182 (327)
T ss_dssp TT-TCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCC----CCSEEEEEEEEEECBSSCTTC
T ss_pred cc-eeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCCC----CCceEEEEEeeeeeccCcccc
Confidence 43 459999999999996 679999999997 489999999999999865322 34899999999999873100
Q ss_pred -H----HHHHHHhcCCCCCCCCeEEEcCCCCC----ccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccc
Q 009171 177 -K----ALQKRLEDGYSLPVPDALLINGHHNS----LSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCL 247 (541)
Q Consensus 177 -~----~~~~~~~~~~~~~~~~~~lvNG~~~~----p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~ 247 (541)
+ .+.... ...++.++|||+... +.+++++|++|||||+|+|+.+.+.|+|+||.|+||+.||.+++
T Consensus 183 ~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~ 257 (327)
T 1kbv_A 183 QGLQPFDMDKAV-----AEQPEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLI 257 (327)
T ss_dssp CEEECBCHHHHH-----HTCCSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCE
T ss_pred ccccccChhHhc-----cCCCceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcCC
Confidence 0 011111 135689999999872 36999999999999999999889999999999999999999999
Q ss_pred eeeeeEEEEcCCceEEEEEEeCCCCceeEEEEeccccCCCcceEEEEEecCCCC
Q 009171 248 QESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKPILTTTAILHYDGSNT 301 (541)
Q Consensus 248 p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~ 301 (541)
|..++++.|+||||+||+|+++ .+|.|+|+|+...........|+|+|++...
T Consensus 258 p~~~d~l~l~pGer~dv~v~~~-~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 258 NENVQSTIVPAGGSAIVEFKVD-IPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 310 (327)
T ss_dssp ECSBSEEEECTTEEEEEEEEEC-SCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred CCceeEEEECCCCEEEEEEEeC-CCeEEEEEeccccccccCCcEEEEEECCCCC
Confidence 9999999999999999999999 5899999999764422345789999987643
No 24
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=6.2e-50 Score=396.13 Aligned_cols=245 Identities=17% Similarity=0.197 Sum_probs=195.0
Q ss_pred ccCCCeEEEEEEEEEEEeCCCCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCC
Q 009171 23 NAEDPYRSYTWTVTYGTISPFGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGT 102 (541)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~ 102 (541)
.+...+|+|+|++++.. .+.....+++|||++|||+||+++||+|+|+|+|+|+++++|||||+++. ..+||++ +
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~--~~~DG~~-~ 76 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-M 76 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-T
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccC--CccCCCc-C
Confidence 35677899999999853 34444567889999999999999999999999999999999999999986 5799999 6
Q ss_pred -CCccCCCCeEEEEEEecC------------CceeeEEcCCch------hhhhcceeeEEEEecCCCCCCCCCCCCCceE
Q 009171 103 -NCPIPPNSNWTYKFQMKD------------QIGTFNYFPSTK------VHRAFGGFGAVNVAQRSVISVPYHIPDGEFT 163 (541)
Q Consensus 103 -q~~i~pG~~~~y~f~~~~------------~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~ 163 (541)
||+|+||++++|+|++.+ ++||||||||.+ .|+.+||+|+|||+++... .. |+|++
T Consensus 77 t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~--~~---drE~~ 151 (276)
T 3kw8_A 77 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--LP---DATHT 151 (276)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--CC---SEEEE
T ss_pred CcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc--cc---ccceE
Confidence 999999999999999854 379999999985 6899999999999997531 11 56665
Q ss_pred EEEccccccCCCHHHHHHHHhcCCCCCCCCeEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecC
Q 009171 164 LLVSDWFKNFSSHKALQKRLEDGYSLPVPDALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEG 243 (541)
Q Consensus 164 l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG 243 (541)
|+++|| +
T Consensus 152 l~l~~~--------------------------~----------------------------------------------- 158 (276)
T 3kw8_A 152 IVFNDM--------------------------T----------------------------------------------- 158 (276)
T ss_dssp EEEETT--------------------------E-----------------------------------------------
T ss_pred EEeccc--------------------------c-----------------------------------------------
Confidence 543210 1
Q ss_pred cccceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEeccccCCCcceEEEEEecCCCCCCCCCCCCCCCCcccccccccc
Q 009171 244 AHCLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKPILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQAR 323 (541)
Q Consensus 244 ~~~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~ 323 (541)
T Consensus 159 -------------------------------------------------------------------------------- 158 (276)
T 3kw8_A 159 -------------------------------------------------------------------------------- 158 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCccCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCC
Q 009171 324 TIRTNLTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTP 403 (541)
Q Consensus 324 ~l~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p 403 (541)
|||+.|..
T Consensus 159 ----------------------------------------------iNG~~~~~-------------------------- 166 (276)
T 3kw8_A 159 ----------------------------------------------INNRKPHT-------------------------- 166 (276)
T ss_dssp ----------------------------------------------ETTCCTTC--------------------------
T ss_pred ----------------------------------------------cceecccC--------------------------
Confidence 11111100
Q ss_pred CCCCCCCCceeEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEE
Q 009171 404 TPGAPAKLGASVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSA 483 (541)
Q Consensus 404 ~~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~ 483 (541)
...+.++.|++|+|+|.|.+.+.|||||||+.|+|++.| .++.. ...+.++||+.|.|++++.
T Consensus 167 ---------~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~G--~~~~p------~~~~~~~Dtv~v~pg~~~~ 229 (276)
T 3kw8_A 167 ---------GPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTG--ILTGP------DDPSRVIDNKITGPADSFG 229 (276)
T ss_dssp ---------CCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSS--SCCST------TCCCCEESEEEECTTCEEE
T ss_pred ---------CCCEEEecCCEEEEEEecCCCcceeEEEccceeEEeccC--ccCCC------cccccCCccEEeCCCceEE
Confidence 001345678889999999988899999999999997643 22211 1124689999999999999
Q ss_pred EEEEcC---CcceeEEeechhhHhhcccEEEEEEecCCc
Q 009171 484 IYVSLD---NKGVWNLRSAIWERRYLGQELYLRVSNDER 519 (541)
Q Consensus 484 irf~~d---npG~w~~HCHil~H~d~GMm~~~~V~~~~~ 519 (541)
++|+++ |||.|+||||+++|++.|||..|+|.++++
T Consensus 230 ~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 230 FQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 999997 899999999999999999999999998865
No 25
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=1.4e-48 Score=388.82 Aligned_cols=233 Identities=21% Similarity=0.292 Sum_probs=206.3
Q ss_pred CCCeEEEEEEEEEEEeCCC-CeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCC-
Q 009171 25 EDPYRSYTWTVTYGTISPF-GVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGT- 102 (541)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~-g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~- 102 (541)
...+++|+|++++..+.+. |+.+.+|+|||++|||+||+++||+|+|+|+|.++++++|||||++. .++||+|++
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~ 107 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIG 107 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTST
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCcc
Confidence 3457899999999998864 99999999999999999999999999999999999999999999973 689999998
Q ss_pred CCccCCCCeEEEEEEecCCceeeEEcCCch---hhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCHHHH
Q 009171 103 NCPIPPNSNWTYKFQMKDQIGTFNYFPSTK---VHRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSHKAL 179 (541)
Q Consensus 103 q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~ 179 (541)
|++|+||++++|+|++ +++||||||||.+ .|+.+||+|+|||++++..+ +. ++|++|+++||+.+.
T Consensus 108 ~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~-~~---d~e~~l~~~d~~~~~------ 176 (288)
T 3gdc_A 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP-PA---DDEMVMVMNGYNTDG------ 176 (288)
T ss_dssp TCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC-CC---SEEEEEEEEEECCSS------
T ss_pred ceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC-CC---cceEEEEEeeEecCC------
Confidence 9999999999999997 7899999999997 79999999999999875432 33 799999999998751
Q ss_pred HHHHhcCCCCCCCCeEEEcCCCCC---ccEEEecCCEEEEEEEEcCCCC-eEEEEEcCceeEEEeecCccc-ceeeeeEE
Q 009171 180 QKRLEDGYSLPVPDALLINGHHNS---LSFTGQKGKTYKFRVSNVGIAT-SINFRIQGHTLTLVEVEGAHC-LQESYESI 254 (541)
Q Consensus 180 ~~~~~~~~~~~~~~~~lvNG~~~~---p~l~v~~G~~~rlRliNa~~~~-~~~~~i~~h~~~via~DG~~~-~p~~~d~v 254 (541)
...++.++|||+... +.+++++|++|||||+|++... .+.|||+||.|+|++ +|..+ .|...|++
T Consensus 177 ---------g~~~~~~~iNG~~~~~~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~~~~~~~~Dtv 246 (288)
T 3gdc_A 177 ---------GDDNEFYSVNGLPFHFMDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTMLTPSEYTDTI 246 (288)
T ss_dssp ---------TTCCSEEEETTSTTHHHHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCCSSCSEEESEE
T ss_pred ---------CCCcceEEECcccccccCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCccCCCceeeEE
Confidence 124679999999862 3699999999999999999654 789999999999998 55554 56889999
Q ss_pred EEcCCceEEEEEEeCCCCceeEEEEecc
Q 009171 255 DIHVGQSVAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 255 ~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 282 (541)
.|+||||++|+++++ .||.|.++||..
T Consensus 247 ~v~pg~~~~v~~~~~-~pG~~~~hCH~~ 273 (288)
T 3gdc_A 247 SQVQGQRGILELRFP-YPGKFMFHAHKT 273 (288)
T ss_dssp EEETTCEEEEEECCC-SCEEEEEECSSH
T ss_pred EeCCCceEEEEEECC-CCEEEEEEecCh
Confidence 999999999999998 799999999864
No 26
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=5e-49 Score=396.43 Aligned_cols=249 Identities=18% Similarity=0.201 Sum_probs=197.8
Q ss_pred hcccCCCeEEEEEEEEEEEeCCCCe-eeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCC
Q 009171 21 WVNAEDPYRSYTWTVTYGTISPFGV-PQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGV 99 (541)
Q Consensus 21 ~~~~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~ 99 (541)
.+.+...++.++|.+++ .++|. ...++.+||++|||+|||++||+|+|+|+|+|+++++|||||+++. +.+||+
T Consensus 6 ~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~ 80 (313)
T 3tas_A 6 TAPAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGT 80 (313)
T ss_dssp BCCCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCS
T ss_pred cCCCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCC
Confidence 44556678999998763 35553 3556778999999999999999999999999999999999999885 679999
Q ss_pred CCCCCccCCCCeEEEEEEec------------CCceeeEEcCCch------hhhhcceeeEEEEecCCCCCCCCCCCCCc
Q 009171 100 LGTNCPIPPNSNWTYKFQMK------------DQIGTFNYFPSTK------VHRAFGGFGAVNVAQRSVISVPYHIPDGE 161 (541)
Q Consensus 100 ~~~q~~i~pG~~~~y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e 161 (541)
+..||+|.||++++|+|++. +++||||||||.. .|+.+||+|+|||+++.. ..+ |+|
T Consensus 81 ~~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--~~~---d~e 155 (313)
T 3tas_A 81 KQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--VLP---DRT 155 (313)
T ss_dssp TTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--BCC---SEE
T ss_pred ccccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc--ccc---ccc
Confidence 96699999999999999853 3689999999975 468899999999998653 233 788
Q ss_pred eEEEEccccccCCCHHHHHHHHhcCCCCCCCCeEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEee
Q 009171 162 FTLLVSDWFKNFSSHKALQKRLEDGYSLPVPDALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEV 241 (541)
Q Consensus 162 ~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~ 241 (541)
++|+++||+. ||+..
T Consensus 156 ~~l~~~d~t~--------------------------Ng~~~--------------------------------------- 170 (313)
T 3tas_A 156 HTIVFNDMTI--------------------------NNRPA--------------------------------------- 170 (313)
T ss_dssp EEEEEETTEE--------------------------TTCCT---------------------------------------
T ss_pred ceeeccchhc--------------------------ccCCc---------------------------------------
Confidence 8888776521 11100
Q ss_pred cCcccceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEeccccCCCcceEEEEEecCCCCCCCCCCCCCCCCcccccccc
Q 009171 242 EGAHCLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKPILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQ 321 (541)
Q Consensus 242 DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~ 321 (541)
+..+
T Consensus 171 ------------------------------------------------------------------~~~~---------- 174 (313)
T 3tas_A 171 ------------------------------------------------------------------HTGP---------- 174 (313)
T ss_dssp ------------------------------------------------------------------TCCC----------
T ss_pred ------------------------------------------------------------------cccc----------
Confidence 0000
Q ss_pred cccccccCccCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCC
Q 009171 322 ARTIRTNLTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKD 401 (541)
Q Consensus 322 ~~~l~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~ 401 (541)
+
T Consensus 175 ----------------~--------------------------------------------------------------- 175 (313)
T 3tas_A 175 ----------------D--------------------------------------------------------------- 175 (313)
T ss_dssp ----------------C---------------------------------------------------------------
T ss_pred ----------------c---------------------------------------------------------------
Confidence 0
Q ss_pred CCCCCCCCCCceeEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCE
Q 009171 402 TPTPGAPAKLGASVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSW 481 (541)
Q Consensus 402 ~p~~~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~ 481 (541)
+.++.|++|+|+|.|.+.+.||||||||.|+|+..+.... ....+.++||+.|.|++.
T Consensus 176 --------------l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~~--------~~~~~~~~Dtv~l~Pger 233 (313)
T 3tas_A 176 --------------FEATVGDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLTG--------PDDPSQVIDNKICGPADS 233 (313)
T ss_dssp --------------EEEETTCEEEEEEEEESSCCEEEEETTCCEESSTTSSCCS--------TTCCCCEESEEEECTTCE
T ss_pred --------------cccccCCEEEEEEecccccceeeeecCCeeEEEEECCccC--------CCCCCeeeeEEEeCCCcc
Confidence 1123467789999999989999999999999998764321 123467999999999999
Q ss_pred EEEEEEc---CCcceeEEeechhhHhhcccEEEEEEecCCccc
Q 009171 482 SAIYVSL---DNKGVWNLRSAIWERRYLGQELYLRVSNDERSL 521 (541)
Q Consensus 482 ~~irf~~---dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~ 521 (541)
+.+++.+ +|||.|+||||+++|++.|||..|+|.+++...
T Consensus 234 ~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~~~ 276 (313)
T 3tas_A 234 FGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 276 (313)
T ss_dssp EEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTCCC
T ss_pred eEEEEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECCCCCC
Confidence 9888865 589999999999999999999999999987643
No 27
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=3.8e-49 Score=394.24 Aligned_cols=140 Identities=20% Similarity=0.245 Sum_probs=111.3
Q ss_pred hcccCCCeEEEEEEEEEEEeCCCCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCC
Q 009171 21 WVNAEDPYRSYTWTVTYGTISPFGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVL 100 (541)
Q Consensus 21 ~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~ 100 (541)
..++...++.|+|.+++..-.. ....++++||++|||+|||++||+|+|+|+|+|++++||||||+++. +.+||++
T Consensus 22 p~~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~~ 97 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGTL 97 (299)
T ss_dssp -----CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT
T ss_pred CcccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCCc
Confidence 4456778999999999765221 23445667999999999999999999999999999999999999875 6799998
Q ss_pred CCCCccCCCCeEEEEEEec------------CCceeeEEcCCch------hhhhcceeeEEEEecCCCCCCCCCCCCCce
Q 009171 101 GTNCPIPPNSNWTYKFQMK------------DQIGTFNYFPSTK------VHRAFGGFGAVNVAQRSVISVPYHIPDGEF 162 (541)
Q Consensus 101 ~~q~~i~pG~~~~y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~ 162 (541)
..||+|+||++|+|+|+++ .++||||||||.+ .|+.+||+|+|||+++.. ..+ |+|+
T Consensus 98 ~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--~~~---d~e~ 172 (299)
T 3t9w_A 98 MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--LLP---KRQF 172 (299)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--CCC---SEEE
T ss_pred cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc--cCc---cccc
Confidence 5599999999999999874 2589999999975 478999999999998642 122 6676
Q ss_pred EEEEccc
Q 009171 163 TLLVSDW 169 (541)
Q Consensus 163 ~l~l~d~ 169 (541)
++++++|
T Consensus 173 ~l~~~~~ 179 (299)
T 3t9w_A 173 TVVFNDM 179 (299)
T ss_dssp EEEEETT
T ss_pred eeeeeee
Confidence 6665444
No 28
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=4.2e-46 Score=394.10 Aligned_cols=261 Identities=21% Similarity=0.263 Sum_probs=221.8
Q ss_pred ccCCCeEEEEEEEEEEEeCC-CCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCC--CCeeEeeCCcCCCCCCCCCCC
Q 009171 23 NAEDPYRSYTWTVTYGTISP-FGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLD--EPFLITWNGVKQRRTTWQDGV 99 (541)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DG~ 99 (541)
.+.+++++|+|++++..+.+ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+.+ +||+
T Consensus 23 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~ 97 (442)
T 2zoo_A 23 RDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGG 97 (442)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCC
Confidence 34668899999999999985 799999999999999999999999999999999985 599999999853 6886
Q ss_pred CCCCCccCCCCeEEEEEEecCCceeeEEcCCc---hhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCH
Q 009171 100 LGTNCPIPPNSNWTYKFQMKDQIGTFNYFPST---KVHRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSH 176 (541)
Q Consensus 100 ~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~ 176 (541)
+.. .+|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++..+ .+ |+|++|+++||+++. ..
T Consensus 98 ~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~~-~~---d~e~~l~l~d~~~~~-~~ 170 (442)
T 2zoo_A 98 AES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGLA-PV---DREYYLVQGDFYTKG-EF 170 (442)
T ss_dssp GGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCC-CC---SEEEEEEEEEECBSS-CT
T ss_pred Ccc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCCC-CC---CceEEEEeeeeeccC-cc
Confidence 643 369999999999996 679999999975 489999999999999865322 33 899999999999874 11
Q ss_pred HH-------HHHHHhcCCCCCCCCeEEEcCCCCC----ccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcc
Q 009171 177 KA-------LQKRLEDGYSLPVPDALLINGHHNS----LSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAH 245 (541)
Q Consensus 177 ~~-------~~~~~~~~~~~~~~~~~lvNG~~~~----p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~ 245 (541)
+. +... ....++.++|||+... +.+++++|++|||||+|+|....+.|+|+||.|+||+.||.+
T Consensus 171 ~~~~~~~~~~~~~-----~~~~~~~~liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~ 245 (442)
T 2zoo_A 171 GEAGLQPFDMAKA-----IDEDADYVVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGS 245 (442)
T ss_dssp TCCEEECBCHHHH-----HTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSS
T ss_pred cccccccCChhHh-----ccCCCCEEEECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCcc
Confidence 10 1110 1246789999999862 579999999999999999998999999999999999999999
Q ss_pred cceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEeccccCCCcceEEEEEecCCCC
Q 009171 246 CLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKPILTTTAILHYDGSNT 301 (541)
Q Consensus 246 ~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~ 301 (541)
++|..++++.|+||||+||+|+++ .+|.|+++|+...........++++|.+...
T Consensus 246 ~~p~~~~~~~l~pg~r~~v~v~~~-~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 246 LKNHNVQTTLIPAGGAAIVEFKVE-VPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp CEECSBSEEEECTTEEEEEEEECC-SCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred CCCccceEEEECCCeeEEEEEEcC-CCCeEEEEecccccccccCceEEEEecCCCC
Confidence 999999999999999999999999 5899999998754322356789999987653
No 29
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.2e-46 Score=433.87 Aligned_cols=390 Identities=15% Similarity=0.120 Sum_probs=258.9
Q ss_pred CeeeeEEEECCCCcC--ceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCC-CCCCCCCCCCCCccCCCCeEEEEEEecC
Q 009171 44 GVPQQGILINGQFPG--PAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRR-TTWQDGVLGTNCPIPPNSNWTYKFQMKD 120 (541)
Q Consensus 44 g~~~~~~~~Ng~~pG--P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~-~~~~DG~~~~q~~i~pG~~~~y~f~~~~ 120 (541)
|..+.+.++||++|| |+|++++||+|.++|.|. ++.+||||+++.+ +.++||++.+.|+|.||.+++|+|.+ +
T Consensus 615 ~~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 615 QESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDTANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESEEEECTTCEEEEEECC-C
T ss_pred cccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecceEeecCCceEEEEEec-C
Confidence 357889999999999 889999999999999976 5569999999988 89999998767999999999999996 6
Q ss_pred CceeeEEcCCchhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEE----ccccccCCCHHHHHHHHhc-CCC-------
Q 009171 121 QIGTFNYFPSTKVHRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLV----SDWFKNFSSHKALQKRLED-GYS------- 188 (541)
Q Consensus 121 ~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l----~d~~~~~~~~~~~~~~~~~-~~~------- 188 (541)
++||||||||...|..+||.|.++|++......+....+.|.++.| .||++.. .......+.+. +..
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~-~~~~~~~~~~~~~~~p~~~~~n 769 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSP-QREWEKELHHLQEQNVSNAFLD 769 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCS-CCHHHHHHHHHHTCCCCCTTTC
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCc-chhhhhhccCCCccCccceeec
Confidence 8999999999999999999999999986433333224478899999 8999984 22211111111 110
Q ss_pred ---CCCCC------eEEEcC----------------CCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecC
Q 009171 189 ---LPVPD------ALLING----------------HHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEG 243 (541)
Q Consensus 189 ---~~~~~------~~lvNG----------------~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG 243 (541)
...+. ++.+.+ ....|.|++++|+++++|+.|... ..+.++.+|. .+... |
T Consensus 770 ~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl--~~~~~-~ 845 (1065)
T 2j5w_A 770 KGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGV--QTESS-T 845 (1065)
T ss_dssp CTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSC--BCSCS-C
T ss_pred CCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeeccc--cccCC-C
Confidence 00011 111111 011378999999999999999966 4456666663 33332 2
Q ss_pred cccceeeeeEEEEcCCceEEEEEEeCCC---------CceeEEEEeccccCC-CcceEEEEEecCCCCCCCCCCCCCCCC
Q 009171 244 AHCLQESYESIDIHVGQSVAVVVAMHGP---------PKDYYIVASTRFTKP-ILTTTAILHYDGSNTPPSLPLPIAPTY 313 (541)
Q Consensus 244 ~~~~p~~~d~v~l~pgeR~dv~v~~~~~---------~g~~~i~~~~~~~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~ 313 (541)
...+.||+++...+...+. +|.||++++.....+ .....+.|.+....... +..+..
T Consensus 846 ---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l~----~~~~~~ 912 (1065)
T 2j5w_A 846 ---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLK----VFNPRR 912 (1065)
T ss_dssp ---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC---------CCCC
T ss_pred ---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCccccc----ccCCCc
Confidence 1246799998888876532 268999988532111 11223333333221100 000111
Q ss_pred cccccccc--cc-cccccCccC--CCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCcccccccc
Q 009171 314 HIHWSMKQ--AR-TIRTNLTAN--AARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWF 388 (541)
Q Consensus 314 ~~~~~~~~--~~-~l~~~l~~~--~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~ 388 (541)
+.+..+.. .. ...+.+... ...+.|.. .+.. .... ......|.|||..|..
T Consensus 913 d~D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~------v~~~-----~~~~--~~~~~~~~iNG~~~~~----------- 968 (1065)
T 2j5w_A 913 KLEFALLFLVFDENESWYLDDNIKTYSDHPEK------VNKD-----DEEF--IESNKMHAINGRMFGN----------- 968 (1065)
T ss_dssp EEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGG------CCTT-----CHHH--HHHTEEEEETTBCTTC-----------
T ss_pred ceEEEEEEEeecCCcceeeccCcccccCCccc------cCcc-----hhhh--hccCceEEECCccCCC-----------
Confidence 11111100 00 000000000 00000100 0000 0000 0011347889887531
Q ss_pred CCCcccccCCCCCCCCCCCCCCCceeEEecCCCcEEEEEEEcCC--CCCCceeecCCceEEEEecccccCccccccCcCC
Q 009171 389 NIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLHDYVEIVFQNNE--TSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLN 466 (541)
Q Consensus 389 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ve~vi~N~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~ 466 (541)
...+.++.|++|+|+|.|.+ .+.||||||||.|+|++++
T Consensus 969 ------------------------~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~--------------- 1009 (1065)
T 2j5w_A 969 ------------------------LQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG--------------- 1009 (1065)
T ss_dssp ------------------------CCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT---------------
T ss_pred ------------------------CccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC---------------
Confidence 12356789999999999985 5799999999999999763
Q ss_pred CCCccceEEeCCCCEEEEEEEcCCcceeEEeechhhHhhcccEEEEEEecCCc
Q 009171 467 DAITRHTVQVYPQSWSAIYVSLDNKGVWNLRSAIWERRYLGQELYLRVSNDER 519 (541)
Q Consensus 467 ~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 519 (541)
|.||||+.|+|+++++|+|++||||.|+||||+++|++.|||..|+|.+.+.
T Consensus 1010 -p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1010 -VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp -CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred -CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 5699999999999999999999999999999999999999999999987643
No 30
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=4.3e-46 Score=379.27 Aligned_cols=269 Identities=19% Similarity=0.191 Sum_probs=210.4
Q ss_pred ccCCCeEEEEEEEEEEEeCC-CCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCC
Q 009171 23 NAEDPYRSYTWTVTYGTISP-FGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLG 101 (541)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~ 101 (541)
.+.+++++|+|++++..+.+ +|.++.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.+....||.++
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~ 103 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGG 103 (333)
T ss_dssp SSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGG
T ss_pred CCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCc
Confidence 44567899999999999987 5999999999999999999999999999999999 5789999998865444454444
Q ss_pred CCCccCCCCeEEEEEEecCCceeeEEcCCch-----hhhhcceeeEEEEecCCCCC----CCCCCCCCceEEEEcccccc
Q 009171 102 TNCPIPPNSNWTYKFQMKDQIGTFNYFPSTK-----VHRAFGGFGAVNVAQRSVIS----VPYHIPDGEFTLLVSDWFKN 172 (541)
Q Consensus 102 ~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~ 172 (541)
+ ..|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||++++..+ .++ ..|+|++|+++||++.
T Consensus 104 ~-~~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~ 180 (333)
T 1mzy_A 104 L-TLINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHYIP 180 (333)
T ss_dssp G-CCBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCC
T ss_pred e-eEeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeeccC
Confidence 4 249999999999997 6799999999997 69999999999999764321 122 2388999999999983
Q ss_pred CCCHHH----------HHHHHhcCCCCCCCCeEEEcCCCC----CccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEE
Q 009171 173 FSSHKA----------LQKRLEDGYSLPVPDALLINGHHN----SLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTL 238 (541)
Q Consensus 173 ~~~~~~----------~~~~~~~~~~~~~~~~~lvNG~~~----~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~v 238 (541)
....+. +....+. .....++.++|||+.. .+.++|++|++||||++|++....+ ..+++|.++|
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~~h~~~V 258 (333)
T 1mzy_A 181 KDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRP-HLIGGHGDLV 258 (333)
T ss_dssp BCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCE-EEETCCEEEE
T ss_pred ccccccccccccccccccchhHH-hhccCCcEEEECCcccccCCCcceEecCCCEEEEEECCCCCcccc-EEECCCCeEE
Confidence 101111 0000000 0125678999999983 2569999999988877776554333 3488999999
Q ss_pred EeecCcccce-e-eeeEEEEcCCceEEEEEEeCCCCceeEEEEeccccCCCcceEEEEEecCCCC
Q 009171 239 VEVEGAHCLQ-E-SYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKPILTTTAILHYDGSNT 301 (541)
Q Consensus 239 ia~DG~~~~p-~-~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~ 301 (541)
++ ||.++++ . .+|++.|+||||+||+|+++ .+|.|+++||...........++++|.+...
T Consensus 259 i~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~-~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 259 WE-TGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp ET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred Ee-CCcccCCCccCcceEEECCCceEEEEEEcC-CCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 99 9999974 3 48999999999999999999 4899999999763322356789999987543
No 31
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=1.1e-45 Score=376.02 Aligned_cols=243 Identities=18% Similarity=0.218 Sum_probs=191.3
Q ss_pred CCCeEEEEEEEEEEEeCCCCeeee-EEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCC
Q 009171 25 EDPYRSYTWTVTYGTISPFGVPQQ-GILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTN 103 (541)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~g~~~~-~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q 103 (541)
..++++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+.+. .++||++..|
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~ 119 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 119 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCccccc
Confidence 34679999999875 2443211 1234899999999999999999999999999999999999886 6899999339
Q ss_pred CccCCCCeEEEEEEecC------------CceeeEEcCCc------hhhhhcceeeEEEEecCCCCCCCCCCCCCceEEE
Q 009171 104 CPIPPNSNWTYKFQMKD------------QIGTFNYFPST------KVHRAFGGFGAVNVAQRSVISVPYHIPDGEFTLL 165 (541)
Q Consensus 104 ~~i~pG~~~~y~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~ 165 (541)
|+|.||++++|+|++.+ ++|+||||||. ..|+.+||+|+|||+++... . .|+|++++
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~--~---pd~e~~l~ 194 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--L---PDATHTIV 194 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--C---CSEEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC--C---CCceEEEE
Confidence 99999999999999732 35999999996 36899999999999986431 2 26777776
Q ss_pred EccccccCCCHHHHHHHHhcCCCCCCCCeEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcc
Q 009171 166 VSDWFKNFSSHKALQKRLEDGYSLPVPDALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAH 245 (541)
Q Consensus 166 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~ 245 (541)
++|| +|||+.
T Consensus 195 ~~d~--------------------------~iNG~~-------------------------------------------- 204 (343)
T 3cg8_A 195 FNDM--------------------------TINNRK-------------------------------------------- 204 (343)
T ss_dssp EETT--------------------------EETTCC--------------------------------------------
T ss_pred cccc--------------------------eecccC--------------------------------------------
Confidence 6543 345443
Q ss_pred cceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEeccccCCCcceEEEEEecCCCCCCCCCCCCCCCCcccccccccccc
Q 009171 246 CLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKPILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTI 325 (541)
Q Consensus 246 ~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l 325 (541)
+ +..
T Consensus 205 --------------------------------------------------~-----------~~~--------------- 208 (343)
T 3cg8_A 205 --------------------------------------------------P-----------HTG--------------- 208 (343)
T ss_dssp --------------------------------------------------T-----------TCC---------------
T ss_pred --------------------------------------------------C-----------CCC---------------
Confidence 0 000
Q ss_pred cccCccCCCCCCCCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCC
Q 009171 326 RTNLTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTP 405 (541)
Q Consensus 326 ~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~ 405 (541)
T Consensus 209 -------------------------------------------------------------------------------- 208 (343)
T 3cg8_A 209 -------------------------------------------------------------------------------- 208 (343)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCceeEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEE
Q 009171 406 GAPAKLGASVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIY 485 (541)
Q Consensus 406 ~~~~~~~~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~ir 485 (541)
..+.++.|++|+|+|.|.+.+.||||||||.|+|+.. |.+.. ....+.|+||+.|+|++++.++
T Consensus 209 --------~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~ 272 (343)
T 3cg8_A 209 --------PDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQ 272 (343)
T ss_dssp --------CCEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEE
T ss_pred --------ccEEeCCCCEEEEEEEcCCccccccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEE
Confidence 0023456788999999998899999999999999743 22221 0123568999999999999999
Q ss_pred EEc---CCcceeEEeechhhHhhcccEEEEEEecCCc
Q 009171 486 VSL---DNKGVWNLRSAIWERRYLGQELYLRVSNDER 519 (541)
Q Consensus 486 f~~---dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 519 (541)
|++ +|||.|+||||+++|++.|||..|+|.+++.
T Consensus 273 ~~~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 273 IIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp EETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCC
Confidence 996 7999999999999999999999999987654
No 32
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=1.7e-45 Score=375.53 Aligned_cols=267 Identities=19% Similarity=0.224 Sum_probs=204.6
Q ss_pred cCCCeEEEEEEEEEEEeC--CCCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCC
Q 009171 24 AEDPYRSYTWTVTYGTIS--PFGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLG 101 (541)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~ 101 (541)
+.+++++|+|++++..+. +||.++.+|+|||++|||+|+|++||+|+|+|+|.+. ++||||+++.+...+||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcc
Confidence 355789999999998876 5599999999999999999999999999999999973 34555555544445566544
Q ss_pred CCCccCCCCeEEEEEEecCCceeeEEcCCch----hhhhcceeeEEEEecCCCCC----CCCCCCCCceEEEEccccccC
Q 009171 102 TNCPIPPNSNWTYKFQMKDQIGTFNYFPSTK----VHRAFGGFGAVNVAQRSVIS----VPYHIPDGEFTLLVSDWFKNF 173 (541)
Q Consensus 102 ~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~~ 173 (541)
+ ..|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||++++..+ .+. ..|+|++|+++||++..
T Consensus 105 ~-~~i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 105 L-TNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp G-CCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCCB
T ss_pred e-EEeCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeeecc
Confidence 4 239999999999997 6799999999986 69999999999999865321 122 33889999999999852
Q ss_pred CCHHHHH----------HHHhcCCCCCCCCeEEEcCCCC----CccEEEecCCEEEEEEEEcCCCCeEEEE-EcCceeEE
Q 009171 174 SSHKALQ----------KRLEDGYSLPVPDALLINGHHN----SLSFTGQKGKTYKFRVSNVGIATSINFR-IQGHTLTL 238 (541)
Q Consensus 174 ~~~~~~~----------~~~~~~~~~~~~~~~lvNG~~~----~p~l~v~~G~~~rlRliNa~~~~~~~~~-i~~h~~~v 238 (541)
+..+.+. ..++. .....++.++|||+.. .+.++|++|++||| +|++..+.+.++ |++|.++|
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~~~~~l~v~~GervRl--in~~~~~~~~~~~i~gh~~~V 258 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALTGANALTAKVGETVLL--IHSQANRDTRPHLIGGHGDWV 258 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEE--EEEESSSCBCEEETTCCEEEE
T ss_pred ccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCCCCcceEcCCCCEEEE--EecCCCCccceEEECCcCceE
Confidence 1111110 00000 0124678999999984 28899999997765 566655555544 59999999
Q ss_pred EeecCccccee--eeeEEEEcCCceEEEEEEeCCCCceeEEEEeccccCCCcceEEEEEecCCCC
Q 009171 239 VEVEGAHCLQE--SYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKPILTTTAILHYDGSNT 301 (541)
Q Consensus 239 ia~DG~~~~p~--~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~ 301 (541)
++ ||.+++|. .++++.|+||||+||+|++++ +|.|+++|+...........++++|++...
T Consensus 259 i~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 259 WE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp ET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred eC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhccccCCCeEEEEECCCCC
Confidence 98 99999864 478999999999999999994 899999999753322356789999987654
No 33
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=2.7e-45 Score=374.58 Aligned_cols=269 Identities=19% Similarity=0.195 Sum_probs=206.7
Q ss_pred ccCCCeEEEEEEEEEEEeCC--CCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCC
Q 009171 23 NAEDPYRSYTWTVTYGTISP--FGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVL 100 (541)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~~--~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~ 100 (541)
.+.+++++|+|++++..+.+ ||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +++||||+++.+....||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 44667899999999998875 49999999999999999999999999999999998 67899999876543333333
Q ss_pred CCCCccCCCCeEEEEEEecCCceeeEEcCCch----hhhhcceeeEEEEecCCCCC----CCCCCCCCceEEEEcccccc
Q 009171 101 GTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTK----VHRAFGGFGAVNVAQRSVIS----VPYHIPDGEFTLLVSDWFKN 172 (541)
Q Consensus 101 ~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~ 172 (541)
.+ ..|.||++++|+|++ +++||||||||.+ .|+.+||+|+|||++++..+ .+. ..|+|++|+++||++.
T Consensus 110 ~~-~~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~ 186 (340)
T 2bw4_A 110 AL-TQVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVP 186 (340)
T ss_dssp GG-CCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCC
T ss_pred cc-eEeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeec
Confidence 33 349999999999997 5799999999986 69999999999999865211 122 2388999999999983
Q ss_pred CCCHHH----------HHHHHhcCCCCCCCCeEEEcCCCC----CccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEE
Q 009171 173 FSSHKA----------LQKRLEDGYSLPVPDALLINGHHN----SLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTL 238 (541)
Q Consensus 173 ~~~~~~----------~~~~~~~~~~~~~~~~~lvNG~~~----~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~v 238 (541)
.+.++. .....+. .....++.++|||+.. .+.++|++|+++||+++|++.... ..++++|.|+|
T Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~-~~~i~gh~~~V 264 (340)
T 2bw4_A 187 KDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTR-PHLIGGHGDYV 264 (340)
T ss_dssp BCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBC-EEEETCCEEEE
T ss_pred cccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccc-eEEecCcceEE
Confidence 101111 1100000 0124578999999984 388999999988776666554333 33489999999
Q ss_pred EeecCcccce-e-eeeEEEEcCCceEEEEEEeCCCCceeEEEEeccccCCCcceEEEEEecCCCC
Q 009171 239 VEVEGAHCLQ-E-SYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKPILTTTAILHYDGSNT 301 (541)
Q Consensus 239 ia~DG~~~~p-~-~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~~ 301 (541)
++ ||.++.+ . .++++.|+||||+||+|++++ +|.|+++||...........++++|.+...
T Consensus 265 i~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 265 WA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp ET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred eC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 97 9998864 3 589999999999999999995 899999999763222345678999987543
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=8.7e-41 Score=368.86 Aligned_cols=263 Identities=15% Similarity=0.161 Sum_probs=192.7
Q ss_pred CCCeEEEEEEEEEEEeC--CC-----------C-e--eeeEEEE----------------CCCCcCceEEEecCCEEEEE
Q 009171 25 EDPYRSYTWTVTYGTIS--PF-----------G-V--PQQGILI----------------NGQFPGPAIEAVTNDNIIVN 72 (541)
Q Consensus 25 ~~~~~~~~l~~~~~~~~--~~-----------g-~--~~~~~~~----------------Ng~~pGP~i~v~~Gd~v~v~ 72 (541)
...+|+|-+.+++.... +. | + +.....| ++++|||+|||++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 35689999999887753 21 2 1 1222334 34789999999999999999
Q ss_pred EEECCCCCeeEeeCCcCCCCCCCCCCCCCC---------CCccCCCCeEEEEEEecCC-----ce----eeEEcCCch--
Q 009171 73 LINKLDEPFLITWNGVKQRRTTWQDGVLGT---------NCPIPPNSNWTYKFQMKDQ-----IG----TFNYFPSTK-- 132 (541)
Q Consensus 73 ~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~---------q~~i~pG~~~~y~f~~~~~-----~G----t~wYH~H~~-- 132 (541)
|+|.|+++++|||||+++. +.+||+|++ ||+|+||++++|+|+++++ +| |||||||.+
T Consensus 83 ~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 9999999999999999885 679999863 8999999999999998654 57 999999996
Q ss_pred hhhhcceeeEEEEecCCCCCC--CCCCCCCceEEEEc------cccccCCCHHHHHHHHhcCCCCCCCCeEEEcCCCC-C
Q 009171 133 VHRAFGGFGAVNVAQRSVISV--PYHIPDGEFTLLVS------DWFKNFSSHKALQKRLEDGYSLPVPDALLINGHHN-S 203 (541)
Q Consensus 133 ~q~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~------d~~~~~~~~~~~~~~~~~~~~~~~~~~~lvNG~~~-~ 203 (541)
.|+.+||+|+|||+++..... ..+..++|++|+++ ||+++. ................++.++|||+.. .
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~iNG~~~~~ 238 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDK--KPTRSWRRASSEVKNSHEFHAINGMIYNL 238 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC-----------------CCCEEEEETTBSSCC
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCcccccccc--CcccccccCCcchhhcCceeccCCEecCC
Confidence 799999999999999753211 11223689999999 788773 221100000011234578999999983 4
Q ss_pred ccEEEecCCEEEEEEEEcCCCC-eEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEecc
Q 009171 204 LSFTGQKGKTYKFRVSNVGIAT-SINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 204 p~l~v~~G~~~rlRliNa~~~~-~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 282 (541)
|.+++++|++|||||+|+++.. .+.||++||.|++++.|| ..+|++.|+||||+||+|+++ .+|.|.++||..
T Consensus 239 p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~-~pG~w~~hch~~ 312 (647)
T 1sdd_B 239 PGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKAS-KPGWWLLDTEVG 312 (647)
T ss_dssp CCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECC-SSEEEEEECCCH
T ss_pred CCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEec-cceEeecccCcc
Confidence 8899999999999999999875 889999999999999886 478999999999999999999 589999999964
Q ss_pred ccCCCcceEEEEEecC
Q 009171 283 FTKPILTTTAILHYDG 298 (541)
Q Consensus 283 ~~~~~~~~~ail~y~~ 298 (541)
.. ......+++.+..
T Consensus 313 ~h-~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 313 EI-QRAGMQTPFLIVD 327 (647)
T ss_dssp HH-HTTTCEEEEEEEC
T ss_pred cc-cccccccceeeec
Confidence 22 2234566666643
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.7e-39 Score=344.24 Aligned_cols=256 Identities=17% Similarity=0.202 Sum_probs=211.2
Q ss_pred CCeEEEEEEEEEEEeCC-CCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCC--CCeeEeeCCcCCCCCCCCCCCCCC
Q 009171 26 DPYRSYTWTVTYGTISP-FGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLD--EPFLITWNGVKQRRTTWQDGVLGT 102 (541)
Q Consensus 26 ~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DG~~~~ 102 (541)
+..+.++|++++....+ +|....+|+|||++|||+|++++||+++|+|.|.+. ..++|||||+. .+||+|..
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCcc
Confidence 45678888888777766 689999999999999999999999999999999985 57999999984 36888754
Q ss_pred CCccCCCCeEEEEEEecCCceeeEEcCCch---hhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCHH--
Q 009171 103 NCPIPPNSNWTYKFQMKDQIGTFNYFPSTK---VHRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSHK-- 177 (541)
Q Consensus 103 q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~-- 177 (541)
..|.||++++|.|++ +++|+||||||.. .|+..||+|+|+|+++...+ ..|+|++++++||++.. ..+
T Consensus 236 -~~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~P----~~d~~~~~~~~~~~~~~-~~~~~ 308 (447)
T 2dv6_A 236 -TQTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGLP----QVDREFYVMQGEIYTVK-SFGTS 308 (447)
T ss_dssp -CCBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCSC----CCSEEEEEEEEEECBSS-CTTCC
T ss_pred -EEeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCCC----CCCeeEEEEecccccCC-ccccc
Confidence 239999999999996 6799999999974 78999999999999864322 33789999999998752 100
Q ss_pred -----HHHHHHhcCCCCCCCCeEEEcCCCCC----ccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccce
Q 009171 178 -----ALQKRLEDGYSLPVPDALLINGHHNS----LSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQ 248 (541)
Q Consensus 178 -----~~~~~~~~~~~~~~~~~~lvNG~~~~----p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p 248 (541)
...... ...++.++|||+... +.+++++|++|||||+|++....+.|||+||.|+||+.||.+++|
T Consensus 309 g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~ 383 (447)
T 2dv6_A 309 GEQEMDYEKLI-----NEKPEYFLFNGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSP 383 (447)
T ss_dssp EECCBBHHHHH-----TTCCSEEEETTSTTCCCCCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSC
T ss_pred ccccCChHHhh-----ccCCCEEEECCcccCCCCCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCC
Confidence 011111 124678999999862 379999999999999999988889999999999999999999875
Q ss_pred e--eeeEEEEcCCceEEEEEEeCCCCceeEEEEeccccCCCcceEEEEEecCCC
Q 009171 249 E--SYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKPILTTTAILHYDGSN 300 (541)
Q Consensus 249 ~--~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~~~ 300 (541)
. .+|++.|+||||++|+|+++ .+|.|+++|+.... ......++++|++..
T Consensus 384 p~~~~dtv~l~pg~r~~i~~~~~-~pG~~~~hch~~~h-~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 384 PLIGVQTVSVPPGGATIVDFKID-RAGRYILVDHALSR-LEHGLVGFLNVDGPK 435 (447)
T ss_dssp CEEEESEEEECTTEEEEEEEECC-SCEEEEEEESSGGG-GGGTCCEEEEECSCS
T ss_pred CcccccEEEECCCcEEEEEEECC-CCEEEEEEecCcCc-cccCCEEEEEEeCCC
Confidence 4 58999999999999999999 59999999997543 234568999998754
No 36
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=5.6e-42 Score=344.14 Aligned_cols=210 Identities=14% Similarity=0.240 Sum_probs=159.7
Q ss_pred eEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCC------C---CCccCCCCeEEEEEEe
Q 009171 48 QGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLG------T---NCPIPPNSNWTYKFQM 118 (541)
Q Consensus 48 ~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~------~---q~~i~pG~~~~y~f~~ 118 (541)
...++| ++|||+|||++||+|+|+|+|.++++++|||||+++. ..+||+|. + ||+|+||++++|+|++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~--~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYS--KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCC--TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecc--cccCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 345678 5899999999999999999999999999999999864 34666654 2 6999999999999998
Q ss_pred cCC---------ceeeEEcCCchh--hhhcceeeEEEEecCCCC---CCCCCCCCCceEEEEccccccCCCHHHHHHHHh
Q 009171 119 KDQ---------IGTFNYFPSTKV--HRAFGGFGAVNVAQRSVI---SVPYHIPDGEFTLLVSDWFKNFSSHKALQKRLE 184 (541)
Q Consensus 119 ~~~---------~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~ 184 (541)
+++ +||||||||... |+.+||+|+|||+++... +.+. ..|+|++++++||....
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~----------- 194 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESK----------- 194 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTS-----------
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEeccccc-----------
Confidence 544 379999999874 889999999999986421 1122 34789999999984321
Q ss_pred cCCCCCCCCeEEEcCCCC--CccEEEecCCEEEEEEEEcCCC-CeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCce
Q 009171 185 DGYSLPVPDALLINGHHN--SLSFTGQKGKTYKFRVSNVGIA-TSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQS 261 (541)
Q Consensus 185 ~~~~~~~~~~~lvNG~~~--~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR 261 (541)
......++.++|||+.. .|.+++++|++|||||+|+++. ..+.|+++||.|.+ || ..+|++.|+||||
T Consensus 195 -~~~~~~~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~pger 265 (306)
T 1sdd_A 195 -SWNQTSSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLVSATS 265 (306)
T ss_dssp -SSSCCCCEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEETTCC
T ss_pred -ccccCCCcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEECCCcE
Confidence 00113457899999984 4789999999999999999987 57789999999875 87 3589999999999
Q ss_pred EEEEEEeCCCCceeEEEEecc
Q 009171 262 VAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 262 ~dv~v~~~~~~g~~~i~~~~~ 282 (541)
+||+|+++ .+|.|+++|+..
T Consensus 266 ~~v~~~~~-~pG~~~~hch~~ 285 (306)
T 1sdd_A 266 TTANMTVS-PEGRWTIASLIP 285 (306)
T ss_dssp BC---------CCCCCBCCST
T ss_pred EEEEEEcC-CCeEEEEEeCCh
Confidence 99999998 589999999964
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=2.3e-40 Score=367.50 Aligned_cols=247 Identities=14% Similarity=0.153 Sum_probs=195.0
Q ss_pred CCCeEEEEEEEEEEEe--CCCCe----------------e-eeEEEE-----CC-----------CCcCceEEEecCCEE
Q 009171 25 EDPYRSYTWTVTYGTI--SPFGV----------------P-QQGILI-----NG-----------QFPGPAIEAVTNDNI 69 (541)
Q Consensus 25 ~~~~~~~~l~~~~~~~--~~~g~----------------~-~~~~~~-----Ng-----------~~pGP~i~v~~Gd~v 69 (541)
...+|+|.|.+++... .++|. + ...+.| ++ ++|||+|||++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 5678999999999874 55542 1 222333 33 589999999999999
Q ss_pred EEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecC---------CceeeEEcCCchh--hhhcc
Q 009171 70 IVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKD---------QIGTFNYFPSTKV--HRAFG 138 (541)
Q Consensus 70 ~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~---------~~Gt~wYH~H~~~--q~~~G 138 (541)
+|+|+|.++++++|||||+++..... ||+|+.||+|+||++|+|+|++++ ++||||||||.+. |+.+|
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~G 288 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSG 288 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTS
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCC
Confidence 99999999999999999999986543 699888999999999999999864 7999999999984 89999
Q ss_pred eeeEEEEecCCCCCC--CCCCCCCceEEEEcc------ccccCCCHHHHHHHHh-cCC-------CCCCCCeEEEcCCCC
Q 009171 139 GFGAVNVAQRSVISV--PYHIPDGEFTLLVSD------WFKNFSSHKALQKRLE-DGY-------SLPVPDALLINGHHN 202 (541)
Q Consensus 139 l~G~liV~~~~~~~~--~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~lvNG~~~ 202 (541)
|+|+|||+++..... .....++|++|++++ |+++. . +..+.. +.. .....+.++|||+..
T Consensus 289 L~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~--~--~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~ 364 (770)
T 2r7e_B 289 LIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTE--N--MERNCRAPCNIQMEDPTFKENYRFHAINGYIM 364 (770)
T ss_dssp CCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTG--G--GSSCSCCSSCCCSSSSSSTTTSCEECTTSCTT
T ss_pred ceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhcc--c--hhhcccCccccccCCccccccCCccccCCccC
Confidence 999999999753221 112347899888754 54441 1 111110 000 011235689999974
Q ss_pred --CccEEEecCCEEEEEEEEcCCC-CeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCCCCceeEEEE
Q 009171 203 --SLSFTGQKGKTYKFRVSNVGIA-TSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVA 279 (541)
Q Consensus 203 --~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~ 279 (541)
.+.+++++|++|||||+|++.. ..+.|||+||.|+|++.||. .+|++.|.||||++|+|+++ .+|.|.++|
T Consensus 365 ~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad-~pG~w~~hc 438 (770)
T 2r7e_B 365 DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS-KAGIWRVEC 438 (770)
T ss_dssp TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS-SCBCCCBCC
T ss_pred CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC-CCCceEEEe
Confidence 3678999999999999999965 37899999999999999974 89999999999999999998 599999999
Q ss_pred ecc
Q 009171 280 STR 282 (541)
Q Consensus 280 ~~~ 282 (541)
|..
T Consensus 439 H~~ 441 (770)
T 2r7e_B 439 LIG 441 (770)
T ss_dssp CSH
T ss_pred ccc
Confidence 964
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.2e-36 Score=337.26 Aligned_cols=213 Identities=17% Similarity=0.233 Sum_probs=168.1
Q ss_pred CCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCC-----CCCC-CCccCCCCeEEEEEEecCCce-----
Q 009171 55 QFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDG-----VLGT-NCPIPPNSNWTYKFQMKDQIG----- 123 (541)
Q Consensus 55 ~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG-----~~~~-q~~i~pG~~~~y~f~~~~~~G----- 123 (541)
.+|||+||+++||+|+|+|+|.++++++|||||+++. .+++|| ++.+ ||+|.||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999874 356664 5556 999999999999999876554
Q ss_pred ----eeEEcCCch--hhhhcceeeEEEEecCCCC---CCCCCCCCCceEEEEcc------ccccCCCHHHHHHHHhc-CC
Q 009171 124 ----TFNYFPSTK--VHRAFGGFGAVNVAQRSVI---SVPYHIPDGEFTLLVSD------WFKNFSSHKALQKRLED-GY 187 (541)
Q Consensus 124 ----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~---~~~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~~~~-~~ 187 (541)
|||||||.+ .|+++||+|+|||+++... ..+. ..|+|++|++++ |+++ ..+..+... ..
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~-~~d~E~~l~~~~fde~~~wy~~----~~~~~~~~~p~~ 601 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQI-MSDKRNVILFSVFDENRSWYLT----ENIQRFLPNPAG 601 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSS-CCSCCCEEEECBCCGGGSSCSH----HHHHHHSSSSSC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcC-CCCceEEEEeeccccccccccc----cchhhcccCchh
Confidence 999999998 4789999999999986421 1112 348899999964 4443 122222210 00
Q ss_pred -CC------CCCCeEEEcCCCC-CccEEEecCCEEEEEEEEcCCC-CeEEEEEcCceeEEEeecCcccceeeeeEEEEcC
Q 009171 188 -SL------PVPDALLINGHHN-SLSFTGQKGKTYKFRVSNVGIA-TSINFRIQGHTLTLVEVEGAHCLQESYESIDIHV 258 (541)
Q Consensus 188 -~~------~~~~~~lvNG~~~-~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~p 258 (541)
.. .....++|||+.. ...+++++|++|||||+|+++. ..+.|||+||.|+|+ +..+|++.|.|
T Consensus 602 v~~~~~~~~~~~~~~~ING~~~~~~~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv~l~P 673 (742)
T 2r7e_A 602 VQLEDPEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTLTLFP 673 (742)
T ss_dssp SCCCCHHHHGGGCCBCTTTTCSSCCCCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSSCCCC
T ss_pred cccccccccccCceeeecCcCCCCCcEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEEEECC
Confidence 00 0112478999973 1248999999999999998764 467999999999986 57899999999
Q ss_pred CceEEEEEEeCCCCceeEEEEecc
Q 009171 259 GQSVAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 259 geR~dv~v~~~~~~g~~~i~~~~~ 282 (541)
|||++|+|.++ .+|.|+++||..
T Consensus 674 g~~~~v~~~ad-~pG~w~~hcH~~ 696 (742)
T 2r7e_A 674 FSGETVFMSME-NPGLWILGCHNS 696 (742)
T ss_dssp CSSEECCEECC-CCCCSCCEECCC
T ss_pred CcEEEEEEEcC-CCeEEEEEeCCc
Confidence 99999999998 689999999965
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.97 E-value=2.6e-30 Score=257.04 Aligned_cols=231 Identities=15% Similarity=0.145 Sum_probs=165.8
Q ss_pred CCeEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCCC
Q 009171 192 PDALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHGP 271 (541)
Q Consensus 192 ~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~ 271 (541)
...+++||+...|.|++++|+++++|+.|..... +.+|++|.. ..+.||.+.. +...+.||++++..++++ .
T Consensus 54 ~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~-~~iH~HG~~--~~~~DG~p~~----~~~~i~PG~~~~y~f~~~-~ 125 (288)
T 3gdc_A 54 FKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHP-HTIHFHGVH--RATMDGTPGI----GAGSIAPGQSFTYEFDAT-P 125 (288)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECSSSC-BCCEESSCC--CGGGSCCTTS----TTCSBCTTCEEEEEEECC-S
T ss_pred EEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCc-ccEEecccc--ccccCCCCCc----cceeECCCCEEEEEEEcC-C
Confidence 4689999998779999999999999999998754 589999975 4578987642 335689999999999997 6
Q ss_pred CceeEEEEecccc--CCCcceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccCccCCCCCCCCCCCcccccce
Q 009171 272 PKDYYIVASTRFT--KPILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLTANAARPNPQGSFHYGTIKV 349 (541)
Q Consensus 272 ~g~~~i~~~~~~~--~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~~~ 349 (541)
+|.||++||.... .......+.|.++.... .+. . +.+ +...+...
T Consensus 126 ~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~-----~~~-~--d~e--------~~l~~~d~----------------- 172 (288)
T 3gdc_A 126 FGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEG-----RPP-A--DDE--------MVMVMNGY----------------- 172 (288)
T ss_dssp CEEEEEECCCSSHHHHHHTTCEEEEEEECSSC-----CCC-C--SEE--------EEEEEEEE-----------------
T ss_pred CccEEEEecCcchHHHHhCcCeEEEEEeCCcc-----CCC-C--cce--------EEEEEeeE-----------------
Confidence 9999999996421 01122334444432211 000 0 000 00000000
Q ss_pred eeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEecCCCcEEEEEEE
Q 009171 350 VRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLHDYVEIVFQ 429 (541)
Q Consensus 350 ~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ve~vi~ 429 (541)
.... ......|.|||+.|... ...+.++.|++++|.+.
T Consensus 173 ------~~~~--g~~~~~~~iNG~~~~~~----------------------------------~~~l~v~~Ge~vr~~l~ 210 (288)
T 3gdc_A 173 ------NTDG--GDDNEFYSVNGLPFHFM----------------------------------DFPVKVKQHELVRIHLI 210 (288)
T ss_dssp ------CCSS--TTCCSEEEETTSTTHHH----------------------------------HSCEEEETTCCEEEEEE
T ss_pred ------ecCC--CCCcceEEECccccccc----------------------------------CcccccCCCCEEEEEEE
Confidence 0000 01123588999876311 01246788999999999
Q ss_pred cCCC--CCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcceeEEeechhhHhhcc
Q 009171 430 NNET--SVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVWNLRSAIWERRYLG 507 (541)
Q Consensus 430 N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~G 507 (541)
|.+. +.|||||||+.|+|++.+.. +..|.++||+.|+|++++.|+|++++||.|+||||+++|++.|
T Consensus 211 N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~G 279 (288)
T 3gdc_A 211 NVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELG 279 (288)
T ss_dssp ECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTT
T ss_pred eCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcC
Confidence 9985 35999999999999975431 2235799999999999999999999999999999999999999
Q ss_pred cEEEEEEec
Q 009171 508 QELYLRVSN 516 (541)
Q Consensus 508 Mm~~~~V~~ 516 (541)
||..|+|.+
T Consensus 280 M~~~~~V~~ 288 (288)
T 3gdc_A 280 WMGFFEVSA 288 (288)
T ss_dssp CEEEEEEEC
T ss_pred CCEEEEEeC
Confidence 999999964
No 40
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.96 E-value=2.5e-29 Score=253.06 Aligned_cols=247 Identities=13% Similarity=0.160 Sum_probs=169.4
Q ss_pred CeEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeE-EEeecCcccceeeeeEEEEcCCceEEEEEEeCCC
Q 009171 193 DALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLT-LVEVEGAHCLQESYESIDIHVGQSVAVVVAMHGP 271 (541)
Q Consensus 193 ~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~-via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~ 271 (541)
..+++||+...|.|++++|+++++|+.|.... ...+|++|.... ..+.||.+. +....|.||++++..++++ .
T Consensus 23 ~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~-~ 96 (318)
T 3g5w_A 23 HTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAE-P 96 (318)
T ss_dssp EEEEETTBSSCCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECC-S
T ss_pred EEEEECCccCCceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcC-C
Confidence 58999999977999999999999999999865 458888887654 236788763 2235789999999999998 6
Q ss_pred CceeEEEEeccccCCC--cceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccCccCCCCCCCCCCCcccccce
Q 009171 272 PKDYYIVASTRFTKPI--LTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLTANAARPNPQGSFHYGTIKV 349 (541)
Q Consensus 272 ~g~~~i~~~~~~~~~~--~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~~~ 349 (541)
+|+||+++|.....+. ....+.|.+..... .+.+... +.+..+ ...+...... ......+
T Consensus 97 ~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~---~~~~~~~--d~e~~l-~l~dw~~~~~---~~~~~~~--------- 158 (318)
T 3g5w_A 97 AGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNP---LPIEKTV--TKDYIL-MLSDWVSSWA---NKPGEGG--------- 158 (318)
T ss_dssp CEEEEEECCSSHHHHHHHSCCEEEEEEECSSC---CHHHHTC--CEEEEE-EEEEECGGGT---TCTTCCC---------
T ss_pred CEEEEEEccCChhhhhccCCCEEEEEEcCCCc---ccccccc--cceeEE-EEEeeccccc---cccccCC---------
Confidence 9999999996321110 12333344433211 0000000 000000 0001000000 0000000
Q ss_pred eeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEecCCCcEEEEEEE
Q 009171 350 VRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLHDYVEIVFQ 429 (541)
Q Consensus 350 ~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ve~vi~ 429 (541)
. .......|.|||+.|.. ...+.++.|++++|+|.
T Consensus 159 ---------~-~~~~~d~~~ING~~~~~-----------------------------------~~~l~v~~G~~vrlrli 193 (318)
T 3g5w_A 159 ---------I-PGDVFDYYTINAKSFPE-----------------------------------TQPIRVKKGDVIRLRLI 193 (318)
T ss_dssp ---------C-TTCCCCEEEETTBCBTS-----------------------------------SCCEEECTTCEEEEEEE
T ss_pred ---------C-CCCcCcEEEEcCcCCCC-----------------------------------CccEEeCCCCEEEEEEE
Confidence 0 00112358999987521 11256889999999999
Q ss_pred cCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcceeEEeechhhHhh----
Q 009171 430 NNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVWNLRSAIWERRY---- 505 (541)
Q Consensus 430 N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d---- 505 (541)
|.+...||||||||.|+|+++++... ..|.++||+.|.|++++.|+|+++|||.|+||||+++|++
T Consensus 194 N~~~~~h~~hlhGh~f~vi~~dG~~~----------~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~ 263 (318)
T 3g5w_A 194 GAGDHVHAIHTHGHISQIAFKDGFPL----------DKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDK 263 (318)
T ss_dssp ECSSSCEEEEETTSCEEEEEETTEEE----------EEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTB
T ss_pred eCCCceEEEEECCcEEEEEecCCccc----------CCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCc
Confidence 99988999999999999999965422 2467899999999999999999999999999999999998
Q ss_pred --cccEEEEEEecCC
Q 009171 506 --LGQELYLRVSNDE 518 (541)
Q Consensus 506 --~GMm~~~~V~~~~ 518 (541)
.|||..+++...+
T Consensus 264 ~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 264 PDGGIMTTIEYEEVG 278 (318)
T ss_dssp SSCBSEEEEEETTTC
T ss_pred CCCCCEEEEEECCCC
Confidence 5899999987754
No 41
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=4.6e-29 Score=253.81 Aligned_cols=246 Identities=16% Similarity=0.119 Sum_probs=165.9
Q ss_pred CCeEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEee---cCcccceeeeeEEEEcCCceEEEEEEe
Q 009171 192 PDALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEV---EGAHCLQESYESIDIHVGQSVAVVVAM 268 (541)
Q Consensus 192 ~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~---DG~~~~p~~~d~v~l~pgeR~dv~v~~ 268 (541)
...+++||+...|.+++++|+++|+||+|.+...+ +|+.|-+.+.+. ||.+. +....|.||||+++.+++
T Consensus 23 ~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~---siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~~ 95 (339)
T 2zwn_A 23 YKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPH---TIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFKA 95 (339)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCB---CCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEEC
T ss_pred EEEEEECCccCCCeEEEECCCEEEEEEEECCCCCc---cEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEEEC
Confidence 35899999976699999999999999999997543 444455566664 99863 234579999999999999
Q ss_pred CCCCceeEEEEeccccCC-C-cceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccCccCCCCCCCCCCCcccc
Q 009171 269 HGPPKDYYIVASTRFTKP-I-LTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLTANAARPNPQGSFHYGT 346 (541)
Q Consensus 269 ~~~~g~~~i~~~~~~~~~-~-~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~ 346 (541)
+ .+|+||++++.....+ . ....+.+.+..... ..++.....+.... ..+. .... ...+...+
T Consensus 96 ~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~---~~~~~~~d~e~~l~---l~d~--~~~~-~~~~~~~g------ 159 (339)
T 2zwn_A 96 D-RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQP---LPIEKRVTKDVIMM---MSTW--ESAV-ADKYGEGG------ 159 (339)
T ss_dssp C-SCEEEEEECCSSHHHHTTTSCCEEEEEEECSSC---CTTGGGCSEEEEEE---EEEE--CGGG-TTCTTCCC------
T ss_pred C-CCEEEEEEecCCchhhhhcCCceEeEEecCCCc---ccccccCCceEEEE---eehe--eccc-ccccCCCC------
Confidence 8 6999999998642111 1 12223333332211 01111000010000 0000 0000 00000000
Q ss_pred cceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEecCCCcEEEE
Q 009171 347 IKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLHDYVEI 426 (541)
Q Consensus 347 ~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ve~ 426 (541)
. .......|.|||+.|.. ...+.++.|++++|
T Consensus 160 ----------~---~~~~~~~~~ING~~~~~-----------------------------------~~~~~v~~G~~vrl 191 (339)
T 2zwn_A 160 ----------T---PMNVADYFSVNAKSFPL-----------------------------------TQPLRVKKGDVVKI 191 (339)
T ss_dssp ----------S---TTSCCCEEEETTBCTTS-----------------------------------SCCEEECTTCEEEE
T ss_pred ----------C---CccccceEEEccccCCC-----------------------------------cccEEECCCCEEEE
Confidence 0 00112358899976421 12356889999999
Q ss_pred EEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcceeEEeechhhH---
Q 009171 427 VFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVWNLRSAIWER--- 503 (541)
Q Consensus 427 vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H--- 503 (541)
.|.|.+...||||||||+|+|++.++... .+|.++||+.|+||+++.|+|+++|||.|++|||+++|
T Consensus 192 rliN~~~~~h~~hlhGh~f~vi~~DG~~~----------~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~ 261 (339)
T 2zwn_A 192 RFFGAGGGIHAMHSHGHDMLVTHKDGLPL----------DSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTA 261 (339)
T ss_dssp EEEECSSSCEEEEETTCCEEEEEETTEEE----------EEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCB
T ss_pred EEEeCCCceEEEEECCcEEEEEEeCCeec----------CCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhccc
Confidence 99999988999999999999999965322 23678999999999999999999999999999999999
Q ss_pred ---hhcccEEEEEEecCC
Q 009171 504 ---RYLGQELYLRVSNDE 518 (541)
Q Consensus 504 ---~d~GMm~~~~V~~~~ 518 (541)
++.|||..+++....
T Consensus 262 ~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 262 GGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp TTBSSCSSEEEEEETTSC
T ss_pred ccccCCCcEEEEEECCCC
Confidence 889999999986643
No 42
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.90 E-value=1.8e-25 Score=224.12 Aligned_cols=233 Identities=14% Similarity=0.129 Sum_probs=138.9
Q ss_pred eEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccc----eeeeeEEEEcCCceEEEEEEeC
Q 009171 194 ALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCL----QESYESIDIHVGQSVAVVVAMH 269 (541)
Q Consensus 194 ~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~----p~~~d~v~l~pgeR~dv~v~~~ 269 (541)
..++||... |+|++++|+++|+||.|... ..+.+|.+|..+. .+.||.+.. +...+...|.||||++..++++
T Consensus 51 ~~~~n~~pG-P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 51 QSRTSGLLG-PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp CCSSCCSCC-CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred ccccCCccC-CEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 346898777 99999999999999999875 4567888887642 257888753 2223356789999999999997
Q ss_pred CCC---------ceeEEEEeccccCC---CcceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccCccCCCCCC
Q 009171 270 GPP---------KDYYIVASTRFTKP---ILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLTANAARPN 337 (541)
Q Consensus 270 ~~~---------g~~~i~~~~~~~~~---~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~ 337 (541)
+.+ |+||+|+|.....+ .+. .++|.+..... .....+. ..+ .++...+..
T Consensus 128 ~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~-G~liV~~~~~~-~~~~~~~----~~d------~e~~l~~~d------ 189 (306)
T 1sdd_A 128 EHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLI-GPLLICKKGTL-TEDGTQK----MFE------KQHVLMFAV------ 189 (306)
T ss_dssp GGGSCCSSSCSEEEEEEECCSSSHHHHHTTCC-EEEEEECTTCB-CTTSSBS----SSC------CCCCCBCCE------
T ss_pred CccCCCCCCCCceEEEEeccCCchhhhccCce-EEEEEccCCCC-CccCCcC----ccc------ceEEEEEEe------
Confidence 543 69999999532111 122 34444432211 0000000 000 000000100
Q ss_pred CCCCCcccccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEe
Q 009171 338 PQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIP 417 (541)
Q Consensus 338 p~~~~~~~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 417 (541)
+.-..+.. ......|.|||+.|.. .| .+.
T Consensus 190 ---------------~d~~~~~~-~~~~~~~~ING~~~~~--~p---------------------------------~l~ 218 (306)
T 1sdd_A 190 ---------------FDESKSWN-QTSSLMYTVNGYVNGT--MP---------------------------------DIT 218 (306)
T ss_dssp ---------------EETTSSSS-CCCCEEECSSSCCSSC--CC---------------------------------CCC
T ss_pred ---------------cccccccc-cCCCcceeeCCEecCC--Cc---------------------------------ceE
Confidence 00000000 0112347889877521 11 245
Q ss_pred cCCCcEEEEEEEcCCC--CCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcceeE
Q 009171 418 TTLHDYVEIVFQNNET--SVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVWN 495 (541)
Q Consensus 418 ~~~g~~ve~vi~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~ 495 (541)
++.|++++|.|.|.+. ..|||||||+.|++ .| .++||+.|.||+++.|+|++++||.|+
T Consensus 219 v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~ 279 (306)
T 1sdd_A 219 VCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWT 279 (306)
T ss_dssp CCCC------BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCC
T ss_pred EcCCCEEEEEEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEE
Confidence 6789999999999985 47999999999986 11 258999999999999999999999999
Q ss_pred EeechhhHhhcccEEEEEEecC
Q 009171 496 LRSAIWERRYLGQELYLRVSND 517 (541)
Q Consensus 496 ~HCHil~H~d~GMm~~~~V~~~ 517 (541)
||||+++|++.|||..|+|.+.
T Consensus 280 ~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 280 IASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp CBCCSTTTGGGTCBCCC-----
T ss_pred EEeCChHHHhcCCeEEEEEecC
Confidence 9999999999999999998754
No 43
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.88 E-value=6.5e-22 Score=201.52 Aligned_cols=258 Identities=14% Similarity=0.157 Sum_probs=158.6
Q ss_pred CCeEEEcCCCCCccEEEecCCEEEEEEEEcCC-CCeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCC
Q 009171 192 PDALLINGHHNSLSFTGQKGKTYKFRVSNVGI-ATSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHG 270 (541)
Q Consensus 192 ~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~-~~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~ 270 (541)
...+++||+...|.+++++|+++|+|++|... ...+.+++++... +.||..+ . .|.|||++++.++++
T Consensus 59 ~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~---~----~i~PG~~~~y~~~~~- 127 (340)
T 2bw4_A 59 IHAMTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL---T----QVNPGEETTLRFKAT- 127 (340)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG---C----CBCTTEEEEEEEECC-
T ss_pred EEEEEECCCCCCCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc---e----EeCCCCEEEEEEECC-
Confidence 46899999986699999999999999999973 3455677777542 2244322 1 399999999999998
Q ss_pred CCceeEEEEecccc--CC-CcceE-EEEEecCCCCCCCCCCCCCCCCcccccccccccccccCccCCCCCCCCCCCc-cc
Q 009171 271 PPKDYYIVASTRFT--KP-ILTTT-AILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLTANAARPNPQGSFH-YG 345 (541)
Q Consensus 271 ~~g~~~i~~~~~~~--~~-~~~~~-ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~-~~ 345 (541)
.+|+||+|||.... .+ ..... +++.......+...+.|.. .+.+..+ ...++..... +.+.+. +.
T Consensus 128 ~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~--~d~e~~l-~l~D~~~~~~-------~~g~~~~~~ 197 (340)
T 2bw4_A 128 KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLT--YDKIYYV-GEQDFYVPKD-------EAGNYKKYE 197 (340)
T ss_dssp SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEEC--CSEEEEE-EEEEECCCBC-------TTSCBCCCC
T ss_pred CCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcC--cceeEEE-eeeeeeeccc-------cCCcccccc
Confidence 49999999996321 01 11222 3333322111000001110 0111000 0011100000 000000 00
Q ss_pred cc--ceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEecCCCcE
Q 009171 346 TI--KVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLHDY 423 (541)
Q Consensus 346 ~~--~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 423 (541)
.. ..... ...........|.|||+.|... +...+.++.|++
T Consensus 198 ~~~~~~~~~----~~~~~~~~~~~~~iNG~~~~~~---------------------------------~~~~l~v~~G~r 240 (340)
T 2bw4_A 198 TPGEAYEDA----VKAMRTLTPTHIVFNGAVGALT---------------------------------GDHALTAAVGER 240 (340)
T ss_dssp SHHHHHHHH----HHHHHTTCCSEEEETTSTTTTS---------------------------------GGGCEEEETTCE
T ss_pred cccccccch----hhHhhcCCCCEEEECCccCCcc---------------------------------CCCceEcCCCCE
Confidence 00 00000 0000001123588999875211 122367788999
Q ss_pred EEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCC--ccceEEeCCCCEEEEEEEcCCcceeEEeechh
Q 009171 424 VEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAI--TRHTVQVYPQSWSAIYVSLDNKGVWNLRSAIW 501 (541)
Q Consensus 424 ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~--~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil 501 (541)
++|++.|.+...|++|+|||.|+|+. + |.+ .+++ ++||+.|.+|+.+.|.|++++||.|+||||++
T Consensus 241 ~Rl~n~~~~~~~~~~~i~gh~~~Vi~-d-G~~----------~~~p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~~ 308 (340)
T 2bw4_A 241 VLVVHSQANRDTRPHLIGGHGDYVWA-T-GKF----------RNPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNL 308 (340)
T ss_dssp EEEEEEESSSCBCEEEETCCEEEEET-T-CCT----------TSCCEEEESCCCBCTTEEEEEEEECCSCEEEEEEESSH
T ss_pred EEEEECCCCCccceEEecCcceEEeC-C-Ccc----------cCCccccceEEEeCCCceEEEEEECCCCeeeEEEcCch
Confidence 99988888888999999999999986 2 222 1222 47999999999999999999999999999999
Q ss_pred -hHhhcccEEEEEEecCCc
Q 009171 502 -ERRYLGQELYLRVSNDER 519 (541)
Q Consensus 502 -~H~d~GMm~~~~V~~~~~ 519 (541)
+|++.|||+.|+|.....
T Consensus 309 ~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 309 IEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp HHHHTTSCEEEEEEESCCC
T ss_pred HHHHhCCCEEEEEECCCCc
Confidence 699999999999987553
No 44
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.88 E-value=6.4e-22 Score=200.10 Aligned_cols=247 Identities=15% Similarity=0.109 Sum_probs=164.8
Q ss_pred CeEEEcCCCCCccEEEecCCEEEEEEEEcCCC-CeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCCC
Q 009171 193 DALLINGHHNSLSFTGQKGKTYKFRVSNVGIA-TSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHGP 271 (541)
Q Consensus 193 ~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~ 271 (541)
..+++||+...|.+++++|+++|+|++|.... ..+.+|++|.. +.||.+. ...|.||+++++.++++ .
T Consensus 59 ~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~y~f~~~-~ 127 (327)
T 1kbv_A 59 RYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTSTFSFKAL-Q 127 (327)
T ss_dssp EEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEEEEEECC-S
T ss_pred EEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEEEEEECC-C
Confidence 57999999877999999999999999999753 46688888863 5788652 12489999999999998 4
Q ss_pred CceeEEEEecccc-CC-CcceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccCccCCCCCCCCCCCcccccce
Q 009171 272 PKDYYIVASTRFT-KP-ILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLTANAARPNPQGSFHYGTIKV 349 (541)
Q Consensus 272 ~g~~~i~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~~~ 349 (541)
+|+||+|||.... .+ .....+.+.+.... .+|. .+.+..+ ...+. ..... .. ..+ ..
T Consensus 128 ~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~-----~~p~---~d~e~~l-~~~d~--~~~~~--~~-~~g-----~~-- 186 (327)
T 1kbv_A 128 PGLYIYHCAVAPVGMHIANGMYGLILVEPKE-----GLPK---VDKEFYI-VQGDF--YTKGK--KG-AQG-----LQ-- 186 (327)
T ss_dssp CEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC---CSEEEEE-EEEEE--CBSSC--TT-CCE-----EE--
T ss_pred CeEEEEEeCCCChhhhhhcceEEEEEEecCC-----CCCC---CceEEEE-Eeeee--eccCc--cc-ccc-----cc--
Confidence 8999999985321 01 11222333333221 1221 1111000 00110 00000 00 000 00
Q ss_pred eeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEecCCCcEEEEEEE
Q 009171 350 VRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLHDYVEIVFQ 429 (541)
Q Consensus 350 ~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ve~vi~ 429 (541)
.+.+..... .....+.|||+.+.. .+...+.++.|++++|.|.
T Consensus 187 --~~~~~~~~~--~~~~~~~iNG~~~~~---------------------------------~~~~~l~v~~G~~vRlRli 229 (327)
T 1kbv_A 187 --PFDMDKAVA--EQPEYVVFNGHVGAL---------------------------------TGDNALKAKAGETVRMYVG 229 (327)
T ss_dssp --CBCHHHHHH--TCCSEEEETTSTTTT---------------------------------SGGGCEEEETTEEEEEEEE
T ss_pred --ccChhHhcc--CCCceEEEcCcccCC---------------------------------CCceeEEeCCCCEEEEEEE
Confidence 000000000 111357899976421 0113467889999999999
Q ss_pred cCC-CCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcceeEEeechhhHh-hcc
Q 009171 430 NNE-TSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVWNLRSAIWERR-YLG 507 (541)
Q Consensus 430 N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~-d~G 507 (541)
|.+ ...|+||||||.|+|++.+++.. .|.++|++.|.||+++.|.|++++||.|++|||++.|. ..|
T Consensus 230 N~~~~~~~~~~l~Gh~f~vi~~DG~~~-----------~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g 298 (327)
T 1kbv_A 230 NGGPNLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKG 298 (327)
T ss_dssp EEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSS
T ss_pred CCCCCCceeEEEeCCEEEEEEcCCCcC-----------CCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCC
Confidence 987 57899999999999999976532 25688999999999999999999999999999999995 889
Q ss_pred cEEEEEEecCCc
Q 009171 508 QELYLRVSNDER 519 (541)
Q Consensus 508 Mm~~~~V~~~~~ 519 (541)
|++.++|.....
T Consensus 299 ~~a~l~~~g~~~ 310 (327)
T 1kbv_A 299 ALGQLKVEGAEN 310 (327)
T ss_dssp CEEEEEEESCCC
T ss_pred cEEEEEECCCCC
Confidence 999999976543
No 45
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.88 E-value=4e-22 Score=219.85 Aligned_cols=247 Identities=13% Similarity=0.114 Sum_probs=148.7
Q ss_pred cCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccce----eeeeEEEEcCCceEEEEEEeCCC--
Q 009171 198 NGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQ----ESYESIDIHVGQSVAVVVAMHGP-- 271 (541)
Q Consensus 198 NG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p----~~~d~v~l~pgeR~dv~v~~~~~-- 271 (541)
|++...|+|++++|+++++||.|.... ...+|.||.... .+.||.+... ..+....|.||++++..+++++.
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~g 140 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSG 140 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTS
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccC
Confidence 334445999999999999999999875 457888887654 4789987432 22345679999999999999863
Q ss_pred ---Cc----eeEEEEeccccCC-Ccc-eEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccCccCCCCCCCCCCC
Q 009171 272 ---PK----DYYIVASTRFTKP-ILT-TTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLTANAARPNPQGSF 342 (541)
Q Consensus 272 ---~g----~~~i~~~~~~~~~-~~~-~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~ 342 (541)
+| +||+|+|.....+ ... ..++|.......... +..|..+.+..+. ..++..+. .. ... ...
T Consensus 141 p~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~---~~~~~~~~e~~l~-l~~~d~~~-~w-~~~-~~~-- 211 (647)
T 1sdd_B 141 PENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKE---TNMPVDMREFVLL-FMVFDEKK-SW-YYD-KKP-- 211 (647)
T ss_dssp CCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTT---SCCCSSCCEEEEE-EEEEEGGG-SS-CCC------
T ss_pred CCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccc---cCCCCcceeEEEE-EEeecCcc-cc-ccc-cCc--
Confidence 57 9999999632111 111 223443332211100 0111111111000 00000000 00 000 000
Q ss_pred cccccceeeEEE-EeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEecCCC
Q 009171 343 HYGTIKVVRTIV-LANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLH 421 (541)
Q Consensus 343 ~~~~~~~~r~~~-l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g 421 (541)
...+. ..... ......+.|||+.|. .| .+.++.|
T Consensus 212 -------~~~~~~~~~~~--~~~~~~~~iNG~~~~---~p---------------------------------~l~v~~G 246 (647)
T 1sdd_B 212 -------TRSWRRASSEV--KNSHEFHAINGMIYN---LP---------------------------------GLRMYEQ 246 (647)
T ss_dssp ---------------------CCCEEEEETTBSSC---CC---------------------------------CCEEETT
T ss_pred -------ccccccCCcch--hhcCceeccCCEecC---CC---------------------------------CeEEcCC
Confidence 00000 00000 011245789998751 11 2457789
Q ss_pred cEEEEEEEcCCC--CCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcceeEEeec
Q 009171 422 DYVEIVFQNNET--SVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVWNLRSA 499 (541)
Q Consensus 422 ~~ve~vi~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCH 499 (541)
++++|.|.|.+. +.||||+|||.|+|++.+ +.++||+.|.||+++.|+|++++||.|+||||
T Consensus 247 ~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch 310 (647)
T 1sdd_B 247 EWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTE 310 (647)
T ss_dssp CEEEEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECC
T ss_pred CEEEEEEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccC
Confidence 999999999884 489999999999998652 34789999999999999999999999999999
Q ss_pred hhhHhhcccEEEEEEec
Q 009171 500 IWERRYLGQELYLRVSN 516 (541)
Q Consensus 500 il~H~d~GMm~~~~V~~ 516 (541)
+++|++.|||..|.|.+
T Consensus 311 ~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 311 VGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp CHHHHTTTCEEEEEEEC
T ss_pred cccccccccccceeeec
Confidence 99999999999999974
No 46
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.85 E-value=1.4e-20 Score=191.01 Aligned_cols=261 Identities=11% Similarity=0.060 Sum_probs=152.9
Q ss_pred CCeEEEcCCCCCccEEEecCCEEEEEEEEcCCC-CeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCC
Q 009171 192 PDALLINGHHNSLSFTGQKGKTYKFRVSNVGIA-TSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHG 270 (541)
Q Consensus 192 ~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~ 270 (541)
...+++||+...|.+++++|+++++|+.|.+.. ..+.++++++. ..||.. +.. .|.||+++++.++++
T Consensus 52 ~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~~~----~i~PG~~~~y~f~~~- 120 (333)
T 1mzy_A 52 LQAMTFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--GLT----LINPGEKVVLRFKAT- 120 (333)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--GGC----CBCTTEEEEEEEECC-
T ss_pred EEEEEECCccCCCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--cee----EeCCCCEEEEEEECC-
Confidence 358899999866999999999999999999642 23344555432 123221 111 389999999999998
Q ss_pred CCceeEEEEeccc----cCCCcceEEEEEecCCCC-CCCCCCCCCCCCcccccccccccccccCccCCCCCCCCCCCc-c
Q 009171 271 PPKDYYIVASTRF----TKPILTTTAILHYDGSNT-PPSLPLPIAPTYHIHWSMKQARTIRTNLTANAARPNPQGSFH-Y 344 (541)
Q Consensus 271 ~~g~~~i~~~~~~----~~~~~~~~ail~y~~~~~-~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~-~ 344 (541)
.+|.||+|||... ........+.+.+..... +.....|. ..+.+..+ ...++ .+.. ...+.+. +
T Consensus 121 ~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~--~~d~e~~l-~l~D~--~~~~-----~~~g~~~~~ 190 (333)
T 1mzy_A 121 RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV--RYDTVYYI-GESDH--YIPK-----DEDGTYMRF 190 (333)
T ss_dssp SCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC--CCSEEEEE-EEEEE--CCCB-----CTTSCBCCC
T ss_pred CCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC--ccchheee-eeeee--ccCc-----ccccccccc
Confidence 5999999999642 111112233333332211 00000111 01111100 00111 0100 0000000 0
Q ss_pred cccceeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEecCCCcEE
Q 009171 345 GTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLHDYV 424 (541)
Q Consensus 345 ~~~~~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v 424 (541)
... .. .+.-............|.|||+.+..+ +...+.++.|+++
T Consensus 191 ~~~-~~-~~~~~~~~~~~~~~~~~~ING~~~~~~---------------------------------~~~~l~v~~Ger~ 235 (333)
T 1mzy_A 191 SDP-SE-GYEDMVAVMDTLIPSHIVFNGAVGALT---------------------------------GEGALKAKVGDNV 235 (333)
T ss_dssp SSH-HH-HHHHHHHHHTTTCCSEEEETTSTTTTS---------------------------------GGGCEEEETTCEE
T ss_pred ccc-cc-cccchhHHhhccCCcEEEECCcccccC---------------------------------CCcceEecCCCEE
Confidence 000 00 000000000001123588999764211 1123677889998
Q ss_pred EEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCC-ccceEEeCCCCEEEEEEEcCCcceeEEeechhhH
Q 009171 425 EIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAI-TRHTVQVYPQSWSAIYVSLDNKGVWNLRSAIWER 503 (541)
Q Consensus 425 e~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~-~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H 503 (541)
+|++.|.+...|++++|+|.|+|++ + |.+-+ .|. ++||+.|.||+.+.+.|.+++||.|+||||+++|
T Consensus 236 Rl~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~~---------~p~~~~dtv~l~pGer~~v~v~a~~pG~y~~~ch~~~h 304 (333)
T 1mzy_A 236 LFVHSQPNRDSRPHLIGGHGDLVWE-T-GKFHN---------APERDLETWFIRGGTAGAALYKFLQPGVYAYVNHNLIE 304 (333)
T ss_dssp EEEEEESSSCBCEEEETCCEEEEET-T-CCTTS---------CCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHH
T ss_pred EEEECCCCCccccEEECCCCeEEEe-C-CcccC---------CCccCcceEEECCCceEEEEEEcCCCEEEEEecChhhh
Confidence 9887776666666668889999987 3 32211 122 6899999999999999999999999999999999
Q ss_pred h-hcccEEEEEEecCCc
Q 009171 504 R-YLGQELYLRVSNDER 519 (541)
Q Consensus 504 ~-d~GMm~~~~V~~~~~ 519 (541)
+ +.|||..|+|.....
T Consensus 305 ~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 305 AVHKGATAHVLVEGEWD 321 (333)
T ss_dssp HHTTCCEEEEEEESCCC
T ss_pred HhhCCCEEEEEEcCCCC
Confidence 7 999999999987543
No 47
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.85 E-value=1.7e-22 Score=224.39 Aligned_cols=243 Identities=12% Similarity=0.053 Sum_probs=149.9
Q ss_pred CccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCC---------CCc
Q 009171 203 SLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHG---------PPK 273 (541)
Q Consensus 203 ~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~---------~~g 273 (541)
.|.|+++.|++++++|.|.... ...+|.||..+..-.-||.+- + .-.|.||++++..+++++ .+|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~~~~dG~~~-~----~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQASR-PYSFYSSLISYEEDQRQGAEP-R----KNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCSSS-CCCCCBTTCCCCCCSSSCTTT-T----SSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECCCC-CcceeecccccccccCCCCcC-c----cCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 4999999999999999999764 557888887665444358652 1 246899999999999874 579
Q ss_pred eeEEEEeccccCC-CcceEEEEEecCCCCCCCCCCCCCCCCccccccccccc-ccccCccCC--CCCCCCCCCcccccce
Q 009171 274 DYYIVASTRFTKP-ILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQART-IRTNLTANA--ARPNPQGSFHYGTIKV 349 (541)
Q Consensus 274 ~~~i~~~~~~~~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~-l~~~l~~~~--~~p~p~~~~~~~~~~~ 349 (541)
.||+|+|.....+ .....+.|.+...........+.....+....+..... ..+.+.... ....|.. . ...
T Consensus 272 t~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~-~--~~~-- 346 (770)
T 2r7e_B 272 AWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCN-I--QME-- 346 (770)
T ss_dssp EEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSC-C--CSS--
T ss_pred eEEeeccCCcHHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhhcccCccc-c--ccC--
Confidence 9999999643111 11222333333322111000000000010000000000 000000000 0000000 0 000
Q ss_pred eeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEecCCCcEEEEEEE
Q 009171 350 VRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLHDYVEIVFQ 429 (541)
Q Consensus 350 ~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ve~vi~ 429 (541)
+.. +. .....|.|||..|. ....+.++.|++++|.|.
T Consensus 347 d~~--~~------~~~~~~~ING~~~~-----------------------------------~~~~l~v~~Ge~vr~rli 383 (770)
T 2r7e_B 347 DPT--FK------ENYRFHAINGYIMD-----------------------------------TLPGLVMAQDQRIRWYLL 383 (770)
T ss_dssp SSS--ST------TTSCEECTTSCTTT-----------------------------------TCCCCCCCSSSCEEEECC
T ss_pred Ccc--cc------ccCCccccCCccCC-----------------------------------CCCCeEEeCCCEEEEEEE
Confidence 000 00 11123667776541 112246788999999999
Q ss_pred cCCC--CCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcceeEEeechhhHhhcc
Q 009171 430 NNET--SVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVWNLRSAIWERRYLG 507 (541)
Q Consensus 430 N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~G 507 (541)
|.+. +.||||||||.|+|++.++ .++||+.|.|++++.|+|++++||.|+||||+++|++.|
T Consensus 384 N~g~~~~~H~fHlhGh~f~Vv~~dg----------------~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~G 447 (770)
T 2r7e_B 384 SMGSNENIHSIHFSGHVFTVRKKEE----------------YKMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHLHAG 447 (770)
T ss_dssp CCCSSSCCCEEEBSSCCEECCSSSC----------------CEESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHHTTB
T ss_pred eCCCCcceEEEEEcCCEEEEEecCC----------------ceeeEEEECCCeEEEEEEEeCCCCceEEEeccccccccc
Confidence 9874 4899999999999997642 289999999999999999999999999999999999999
Q ss_pred cEEEEEEe
Q 009171 508 QELYLRVS 515 (541)
Q Consensus 508 Mm~~~~V~ 515 (541)
||..|.|.
T Consensus 448 M~~~~~V~ 455 (770)
T 2r7e_B 448 MSTLFLVY 455 (770)
T ss_dssp CCCCCCBC
T ss_pred cccccccc
Confidence 99999884
No 48
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.82 E-value=1.4e-19 Score=190.86 Aligned_cols=248 Identities=14% Similarity=0.082 Sum_probs=166.1
Q ss_pred CCeEEEcCCCCCccEEEecCCEEEEEEEEcCCC-CeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCC
Q 009171 192 PDALLINGHHNSLSFTGQKGKTYKFRVSNVGIA-TSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHG 270 (541)
Q Consensus 192 ~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~ 270 (541)
...+++||+...|.++++.|+++++|+.|.... ..+.+|+||+. ..||... ...|.||+++++.++++
T Consensus 48 ~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~- 116 (442)
T 2zoo_A 48 YVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKAL- 116 (442)
T ss_dssp EEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECC-
T ss_pred EEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcC-
Confidence 357999999866999999999999999999643 46789999975 4687643 23589999999999998
Q ss_pred CCceeEEEEecccc-CC-CcceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccCccCCCCCCCCCCCcccccc
Q 009171 271 PPKDYYIVASTRFT-KP-ILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIRTNLTANAARPNPQGSFHYGTIK 348 (541)
Q Consensus 271 ~~g~~~i~~~~~~~-~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~~ 348 (541)
.+|.||+|||.... .+ .....+.+.+.... .+|. .+.+..+. ..+. .+... .+..
T Consensus 117 ~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~-----~~~~---~d~e~~l~-l~d~--~~~~~------~~~~------ 173 (442)
T 2zoo_A 117 NPGLYIYHCATAPVGMHIANGMYGLILVEPKE-----GLAP---VDREYYLV-QGDF--YTKGE------FGEA------ 173 (442)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC---CSEEEEEE-EEEE--CBSSC------TTCC------
T ss_pred CCeEEEEecCCCChHHHHhCccEEEEEEeCCC-----CCCC---CCceEEEE-eeee--eccCc------cccc------
Confidence 59999999974211 11 12234444444322 1111 11111000 0111 11100 0000
Q ss_pred eeeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEecCCCcEEEEEE
Q 009171 349 VVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLHDYVEIVF 428 (541)
Q Consensus 349 ~~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ve~vi 428 (541)
....+.+.. .. ......+.|||+.+... ....+.++.|++++|.|
T Consensus 174 ~~~~~~~~~-~~-~~~~~~~liNG~~~~~~---------------------------------~~~~l~v~~G~~vrlrl 218 (442)
T 2zoo_A 174 GLQPFDMAK-AI-DEDADYVVFNGSVGSTT---------------------------------DENSLTAKVGETVRLYI 218 (442)
T ss_dssp EEECBCHHH-HH-TTCCSEEEETTSTTTTS---------------------------------GGGCEEEETTCEEEEEE
T ss_pred ccccCChhH-hc-cCCCCEEEECCCcCCCC---------------------------------CCCceEeCCCCEEEEEE
Confidence 000000000 00 01123477899764210 01235678899999999
Q ss_pred EcCC-CCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcceeEEeechhhH-hhc
Q 009171 429 QNNE-TSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVWNLRSAIWER-RYL 506 (541)
Q Consensus 429 ~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H-~d~ 506 (541)
.|.+ ...|+||+||+.|+|++.+++.. .|.+.|++.|.||+...+.|++++||.|++|||.+.| .+.
T Consensus 219 iN~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~ 287 (442)
T 2zoo_A 219 GNGGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNK 287 (442)
T ss_dssp EEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTT
T ss_pred EeCCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCCCCeEEEEeccccccccc
Confidence 9976 57899999999999999975422 2568899999999999999999999999999999999 599
Q ss_pred ccEEEEEEecCCc
Q 009171 507 GQELYLRVSNDER 519 (541)
Q Consensus 507 GMm~~~~V~~~~~ 519 (541)
||+..++|...+.
T Consensus 288 g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 288 GALAMLKVEGPDD 300 (442)
T ss_dssp SCEEEEEEESCCC
T ss_pred CceEEEEecCCCC
Confidence 9999999987664
No 49
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.81 E-value=8.8e-19 Score=178.06 Aligned_cols=258 Identities=14% Similarity=0.162 Sum_probs=156.6
Q ss_pred CCeEEEcCCCCCccEEEecCCEEEEEEEEcCCC-CeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCC
Q 009171 192 PDALLINGHHNSLSFTGQKGKTYKFRVSNVGIA-TSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHG 270 (541)
Q Consensus 192 ~~~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~ 270 (541)
-..+++||+...|.+++++|+++++|+.|.... ..+.++++++.. +.||..+. .|.||++++..++++
T Consensus 53 ~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~~-------~i~pG~~~~y~f~~~- 121 (336)
T 1oe1_A 53 LQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKLT-------NVNPGEQATLRFKAD- 121 (336)
T ss_dssp EEEEEETTBSSCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGGC-------CBCTTEEEEEEEECC-
T ss_pred EEEEEECCccCCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcceE-------EeCCCCEEEEEEECC-
Confidence 357999999877999999999999999998742 456788888752 22333221 389999999999998
Q ss_pred CCceeEEEEecccc--CC-CcceEEEEEecCCCCCCCCCCCCCCCCccccccc-ccccccccCccCCCCCCCCCCCc-cc
Q 009171 271 PPKDYYIVASTRFT--KP-ILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMK-QARTIRTNLTANAARPNPQGSFH-YG 345 (541)
Q Consensus 271 ~~g~~~i~~~~~~~--~~-~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~-~~~~l~~~l~~~~~~p~p~~~~~-~~ 345 (541)
.+|+||+|||.... .+ .....+.+.+...... ..+.+. |. ..+.... ...++ .+.. .+.+.+. +.
T Consensus 122 ~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~-~~~~~~-~~-~~D~e~~l~~~D~--~~~~-----~~~g~~~~~~ 191 (336)
T 1oe1_A 122 RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGL-KDPQGK-PL-HYDRAYTIGEFDL--YIPK-----GPDGKYKDYA 191 (336)
T ss_dssp SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCC-BCTTSC-BC-CCSEEEEEEEEEE--CCCB-----CTTSSBCCCS
T ss_pred CCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCC-cccccC-cc-cCCceeEeeeeee--eecc-----ccCCceeecc
Confidence 59999999996321 01 1122333333322110 011111 10 1111000 00111 0000 0000000 00
Q ss_pred cc-ce-eeEEEEeccccccCCEEEEEEcCeeeeCCCCccccccccCCCcccccCCCCCCCCCCCCCCCceeEEecCCCcE
Q 009171 346 TI-KV-VRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLHDY 423 (541)
Q Consensus 346 ~~-~~-~r~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 423 (541)
.. .. ... +.. +. ......+.|||+.+.. .+...+.++.|++
T Consensus 192 ~~~~~~~~~--~~~-~~-~~~~~~~liNG~~~~~---------------------------------~~~~~l~v~~Ger 234 (336)
T 1oe1_A 192 TLAESYGDT--VQV-MR-TLTPSHIVFNGKVGAL---------------------------------TGANALTAKVGET 234 (336)
T ss_dssp STGGGHHHH--HHH-HH-TTCCSEEEETTSTTTT---------------------------------SGGGCEEEETTCE
T ss_pred cccccccch--hhH-hh-cCCCCEEEECCeeccC---------------------------------CCCcceEcCCCCE
Confidence 00 00 000 000 00 0111257888876421 1123467888999
Q ss_pred EEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCC--ccceEEeCCCCEEEEEEEcCCcceeEEeechh
Q 009171 424 VEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAI--TRHTVQVYPQSWSAIYVSLDNKGVWNLRSAIW 501 (541)
Q Consensus 424 ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~--~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil 501 (541)
++|+..+.+...+++++|||.|.|+. + |.+- .|+ +.||+.|.+|+.+.+.|.+++||.|+||||.+
T Consensus 235 vRlin~~~~~~~~~~~i~gh~~~Vi~-D-G~~~----------~p~~~~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~ 302 (336)
T 1oe1_A 235 VLLIHSQANRDTRPHLIGGHGDWVWE-T-GKFA----------NPPQRDLETWFIRGGSAGAALYTFKQPGVYAYLNHNL 302 (336)
T ss_dssp EEEEEEESSSCBCEEETTCCEEEEET-T-CCTT----------SCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSH
T ss_pred EEEEecCCCCccceEEECCcCceEeC-C-CcCc----------CCccccceEEEECCCCcEEEEEEcCCCceEEEEechh
Confidence 99876666666777778999999995 3 3221 122 46999999999999999999999999999999
Q ss_pred hHh-hcccEEEEEEecCCc
Q 009171 502 ERR-YLGQELYLRVSNDER 519 (541)
Q Consensus 502 ~H~-d~GMm~~~~V~~~~~ 519 (541)
.|. +.||++.++|.+...
T Consensus 303 ~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 303 IEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp HHHHTTSCEEEEEEESCCC
T ss_pred hccccCCCeEEEEECCCCC
Confidence 886 999999999987544
No 50
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.65 E-value=6.6e-15 Score=154.99 Aligned_cols=249 Identities=14% Similarity=0.121 Sum_probs=157.9
Q ss_pred eEEEEEEEEEEEeCCCC-----------eeeeEEEECCCCcCceEEEecCCEEEEEEEECCC-CCeeEee-CCcCCCCCC
Q 009171 28 YRSYTWTVTYGTISPFG-----------VPQQGILINGQFPGPAIEAVTNDNIIVNLINKLD-EPFLITW-NGVKQRRTT 94 (541)
Q Consensus 28 ~~~~~l~~~~~~~~~~g-----------~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~-~~~~iH~-HG~~~~~~~ 94 (541)
.+++.|.+++.....+| .....+++||+ +.|+|+|++| ++++||.|... ....+|+ ||..... -
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~-~~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGV-QSPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTE-ESCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCc-ccceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 45778888876654433 34568999998 4799999999 99999999984 5678999 8865442 4
Q ss_pred CCCCCCC-----C-CCccCCCCeEEEEEEecCCceeeEEcCCchhhhhccee-----------eEEEEecCCCCCCCCCC
Q 009171 95 WQDGVLG-----T-NCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFGGF-----------GAVNVAQRSVISVPYHI 157 (541)
Q Consensus 95 ~~DG~~~-----~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~-----------G~liV~~~~~~~~~~~~ 157 (541)
..||.+. + +..|.|||+++..++++ +.|+||++++........+. .+++-........+.
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 6899642 2 67899999999999974 68999999987533211111 112111100000000
Q ss_pred CCCceEEEEccccccCCCHHHHHHHHhcCCCCCCCCeEEEcCCCC---CccEEEecCCEEEEEEEEcCCCCeEEEEEcCc
Q 009171 158 PDGEFTLLVSDWFKNFSSHKALQKRLEDGYSLPVPDALLINGHHN---SLSFTGQKGKTYKFRVSNVGIATSINFRIQGH 234 (541)
Q Consensus 158 ~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~lvNG~~~---~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h 234 (541)
..+.+..|..+.... ........+.-. ..++|||+.. .+.+.++.|++++|+|+|. ..+.|||+||
T Consensus 306 -~~~~p~~L~~~~~~~-~~~~~~~~~~l~------~~~~iNg~~f~~~~~~~~~~~G~~~~~~l~N~---~~HP~HLHGh 374 (451)
T 2uxt_A 306 -TDSLPMRLLPTEIMA-GSPIRSRDISLG------DDPGINGQLWDVNRIDVTAQQGTWERWTVRAD---EPQAFHIEGV 374 (451)
T ss_dssp ---CCCSCSSSSCCCC-CCCSEEEEEEEC------SSSSBTTBCCCTTCCCEEEETTCEEEEEEEEE---EEEEEEETTC
T ss_pred -cccCccccCCCCCCC-CCCcceEEEEEe------eEEEECCEeCCCCCCcEEcCCCCEEEEEEECC---CCcCeEECCc
Confidence 000000000000000 000000000000 0477999974 2468999999999999998 4789999999
Q ss_pred eeEEEeecCccc---ceeeeeEEEEcCCceEEEEEEeCCCCce----eEEEEeccccCCCcceEEEEEec
Q 009171 235 TLTLVEVEGAHC---LQESYESIDIHVGQSVAVVVAMHGPPKD----YYIVASTRFTKPILTTTAILHYD 297 (541)
Q Consensus 235 ~~~via~DG~~~---~p~~~d~v~l~pgeR~dv~v~~~~~~g~----~~i~~~~~~~~~~~~~~ail~y~ 297 (541)
.|+|++.||.+. +|...|++.+ |+++.|.++++ .+|. |.+|||...-. .....+.+.+.
T Consensus 375 ~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~HCHil~H~-d~GMm~~~~v~ 440 (451)
T 2uxt_A 375 MFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFNSQTLEMA-DRGSIGQLLVN 440 (451)
T ss_dssp EEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEEESSHHHH-HTTCEEEEEEE
T ss_pred eEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEeCCchhHH-hCCCcEEEEEc
Confidence 999999999876 4788999999 99999999998 4665 99999964211 12345556654
No 51
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.65 E-value=5.4e-15 Score=155.37 Aligned_cols=235 Identities=13% Similarity=0.154 Sum_probs=161.2
Q ss_pred CeEEEEEEEEEEEeCC------------CCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCC-CCeeEeeCCcCCCCC
Q 009171 27 PYRSYTWTVTYGTISP------------FGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLD-EPFLITWNGVKQRRT 93 (541)
Q Consensus 27 ~~~~~~l~~~~~~~~~------------~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~ 93 (541)
..+++.|.+++....- .|.....+++||+. .|.|+|++| ++++|+.|... ....+|++|.....
T Consensus 145 ~~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v- 221 (439)
T 2xu9_A 145 EAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL- 221 (439)
T ss_dssp TSEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-
T ss_pred CCCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-
Confidence 3467777776644321 13445688999985 799999999 99999999984 46799999976543
Q ss_pred CCCCCCCC-----C-CCccCCCCeEEEEEEecCCceeeEEcCCchhhhh---cce--------------eeEEEEecCC-
Q 009171 94 TWQDGVLG-----T-NCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRA---FGG--------------FGAVNVAQRS- 149 (541)
Q Consensus 94 ~~~DG~~~-----~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~---~Gl--------------~G~liV~~~~- 149 (541)
-+.||.+. + ...|.|||+++..+++ +++|.||++|+...... .|| ....+++-..
T Consensus 222 i~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 300 (439)
T 2xu9_A 222 IAADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKN 300 (439)
T ss_dssp EEETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSS
T ss_pred EecCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCC
Confidence 56799753 2 4579999999999997 45999999997531110 122 1122222111
Q ss_pred CCCCCCCC---CCCceE--EEEccccccCCCHHHHHHHHhcCCCCCCCCeEEEcCCCCC---ccEEEecCCEEEEEEEEc
Q 009171 150 VISVPYHI---PDGEFT--LLVSDWFKNFSSHKALQKRLEDGYSLPVPDALLINGHHNS---LSFTGQKGKTYKFRVSNV 221 (541)
Q Consensus 150 ~~~~~~~~---~~~e~~--l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~lvNG~~~~---p~l~v~~G~~~rlRliNa 221 (541)
..+.+.+. ...+.. -.-..+.+.. +. .+..++|||+... +.+.++.|++++|+|.|.
T Consensus 301 ~~~~~~p~~l~~~~~l~~~~~~r~~~l~~------------~~---~g~~~~iNg~~~~~~~~~~~~~~g~~~~~~~~N~ 365 (439)
T 2xu9_A 301 PKPLPLPKALSPFPTLPAPVVTRRLVLTE------------DM---MAARFFINGQVFDHRRVDLKGQAQTVEVWEVENQ 365 (439)
T ss_dssp CCCCCCCSCCCCCCCCCCCSEEEEEEEEE------------EG---GGTEEEETTBCCCTTCCCEEECTTCEEEEEEEEC
T ss_pred CccccCcccCCCcccCCCCCcceEEEEEe------------ec---cCceEeECCEECCCCCCceecCCCCEEEEEEEcC
Confidence 11111100 000000 0000011110 00 1137899999742 358999999999999998
Q ss_pred CCCCeEEEEEcCceeEEEeecCccc-ceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEecc
Q 009171 222 GIATSINFRIQGHTLTLVEVEGAHC-LQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 222 ~~~~~~~~~i~~h~~~via~DG~~~-~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 282 (541)
+. ..+.||||||.|+|++.+|... .|...|++.+.||+++.+.++++ .||.|.+|||..
T Consensus 366 ~~-~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil 425 (439)
T 2xu9_A 366 GD-MDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKGRTVFHCHIV 425 (439)
T ss_dssp SS-SCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CC-CCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCCCEEEECCcc
Confidence 76 4569999999999999999876 47889999999999999999977 799999999964
No 52
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.62 E-value=1.1e-16 Score=133.98 Aligned_cols=89 Identities=19% Similarity=0.331 Sum_probs=70.3
Q ss_pred CCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCC--CCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCch
Q 009171 55 QFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRT--TWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTK 132 (541)
Q Consensus 55 ~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~--~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~ 132 (541)
+|++|+|++++||+|+ ++|.+...+++||||..++.. ..+||.+..++.|.||++++|.|++++++|+||||||
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~-- 90 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA-- 90 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT--
T ss_pred EEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC--
Confidence 5789999999999975 679998999999999865320 0122221115679999999999986468999999999
Q ss_pred hhhhcceeeEEEEec
Q 009171 133 VHRAFGGFGAVNVAQ 147 (541)
Q Consensus 133 ~q~~~Gl~G~liV~~ 147 (541)
.|..+||.|.|+|++
T Consensus 91 ~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PHRGAGMVGKITVEG 105 (105)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred CchhcCCEEEEEEcC
Confidence 566889999999974
No 53
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.60 E-value=2.9e-14 Score=152.21 Aligned_cols=249 Identities=12% Similarity=0.098 Sum_probs=160.7
Q ss_pred EEEEEEEEEEeCCCCe-----eeeEEEECCCCc--------CceEEEecCCEEEEEEEECCC-CCeeEeeCCcCCCCCCC
Q 009171 30 SYTWTVTYGTISPFGV-----PQQGILINGQFP--------GPAIEAVTNDNIIVNLINKLD-EPFLITWNGVKQRRTTW 95 (541)
Q Consensus 30 ~~~l~~~~~~~~~~g~-----~~~~~~~Ng~~p--------GP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~ 95 (541)
++.|.+++.....++. ....+++||+.. .|+|+|++|+++++||.|... ....+|++|..... -.
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 4566666554443332 245789999753 289999999999999999984 46788888876543 46
Q ss_pred CCCCCC----C-CCccCCCCeEEEEEEecCCceeeEEcCCchh--h-----hhcceeeEEEEecCCCCCCCCCCCCCceE
Q 009171 96 QDGVLG----T-NCPIPPNSNWTYKFQMKDQIGTFNYFPSTKV--H-----RAFGGFGAVNVAQRSVISVPYHIPDGEFT 163 (541)
Q Consensus 96 ~DG~~~----~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~--q-----~~~Gl~G~liV~~~~~~~~~~~~~~~e~~ 163 (541)
.||.+. + ...|.|||+++..+++.+.+|.||.+++... + ...|+..+++.........|......+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 799743 2 4568999999999997555799999987541 1 2334444555443221111110000000
Q ss_pred EEEccccccCC-----CHHHH--HH--HHhcCCCCCCCCeEEEcCCCCC------------------------ccEEEec
Q 009171 164 LLVSDWFKNFS-----SHKAL--QK--RLEDGYSLPVPDALLINGHHNS------------------------LSFTGQK 210 (541)
Q Consensus 164 l~l~d~~~~~~-----~~~~~--~~--~~~~~~~~~~~~~~lvNG~~~~------------------------p~l~v~~ 210 (541)
..+.+..+... ..... .. .+.... ......++|||+... +.++++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~-~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQL-GFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCE-EEETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEe-eccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00111111000 00000 00 000000 001126889998741 2478999
Q ss_pred CCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCccc----ceeeeeEEEE-cCCceEEEEEEeCCCCceeEEEEecc
Q 009171 211 GKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHC----LQESYESIDI-HVGQSVAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 211 G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~----~p~~~d~v~l-~pgeR~dv~v~~~~~~g~~~i~~~~~ 282 (541)
|++++++++|......+.||||||.|+|++.+|... .|...|++.+ .||+++.+.++++ .||.|.+|||..
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil 455 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIE 455 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCeeeeEecCch
Confidence 999999999644445679999999999999999763 5889999999 8999999999998 799999999964
No 54
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.60 E-value=2.1e-14 Score=153.95 Aligned_cols=242 Identities=12% Similarity=0.129 Sum_probs=156.6
Q ss_pred eeEEEECCCCc---------CceEEEecCCEEEEEEEECCC-CCeeEeeCCcCCCCCCCCCCCCC----C-CCccCCCCe
Q 009171 47 QQGILINGQFP---------GPAIEAVTNDNIIVNLINKLD-EPFLITWNGVKQRRTTWQDGVLG----T-NCPIPPNSN 111 (541)
Q Consensus 47 ~~~~~~Ng~~p---------GP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~~ 111 (541)
...+++||+.. -|+|+|++|+++++|+.|... ....+|++|..... -..||.+. + ...|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccce
Confidence 45789999743 189999999999999999984 46789998876543 46799743 2 456899999
Q ss_pred EEEEEEecCCceeeEEcCCchh---hhhcceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCC-----CHH----HH
Q 009171 112 WTYKFQMKDQIGTFNYFPSTKV---HRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFS-----SHK----AL 179 (541)
Q Consensus 112 ~~y~f~~~~~~Gt~wYH~H~~~---q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~-----~~~----~~ 179 (541)
++..+++++.+|.||.+++... ....|+..+++.........+..... + ...+.+..+... ... ..
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~-~~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-S-GTALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-C-SCBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-c-ccccchhhcccCCcccCCCcccCCcc
Confidence 9999997555799999997541 12334444555443221111110000 0 000011101000 000 00
Q ss_pred HH--HHhcCCCCCCCCeEEEcCCCCC------------------------ccEEEecCCEEEEEEEEcCCCCeEEEEEcC
Q 009171 180 QK--RLEDGYSLPVPDALLINGHHNS------------------------LSFTGQKGKTYKFRVSNVGIATSINFRIQG 233 (541)
Q Consensus 180 ~~--~~~~~~~~~~~~~~lvNG~~~~------------------------p~l~v~~G~~~rlRliNa~~~~~~~~~i~~ 233 (541)
.. .+..+. ......++|||+... +.+.++.|++++++++| ...+.|||||
T Consensus 348 ~~~~~l~~~~-~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHG 423 (521)
T 1v10_A 348 DINLNLRIGR-NATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHG 423 (521)
T ss_dssp SEEEECCEEC-CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESS
T ss_pred eEEEEEEEec-CCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEcc
Confidence 00 000000 001126789998741 24789999999999999 3467999999
Q ss_pred ceeEEEeecCcc----cceeeeeEEEE-cCCceEEEEEEeCCCCceeEEEEeccccCCCcceEEEEEec
Q 009171 234 HTLTLVEVEGAH----CLQESYESIDI-HVGQSVAVVVAMHGPPKDYYIVASTRFTKPILTTTAILHYD 297 (541)
Q Consensus 234 h~~~via~DG~~----~~p~~~d~v~l-~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~ 297 (541)
|.|+|++.+|.. ..|...|++.+ .||+++.+.++++ .||.|.+|||...-. .......+.+.
T Consensus 424 h~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~~H~-~~GM~~~~~v~ 490 (521)
T 1v10_A 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHIDWHL-EAGLAVVFAED 490 (521)
T ss_dssp CCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCEEEEEEESCHHHH-TTTCEEEEEES
T ss_pred ceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChHHHH-hCCCeEEEEEC
Confidence 999999999875 35889999999 7999999999998 799999999964211 12334445554
No 55
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.57 E-value=7.5e-15 Score=144.59 Aligned_cols=99 Identities=19% Similarity=0.298 Sum_probs=84.2
Q ss_pred EEECCCC--cCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCC-------C-C-CCccCCCCeEEEEEEe
Q 009171 50 ILINGQF--PGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVL-------G-T-NCPIPPNSNWTYKFQM 118 (541)
Q Consensus 50 ~~~Ng~~--pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~-------~-~-q~~i~pG~~~~y~f~~ 118 (541)
|+|||+. ++|.|++++||+|+++|.|.....+++||||..... ..+|.. . . ...|.||++++|+|.+
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v--~~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWAD--NRTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEES--SSSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEE--eccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 6999998 899999999999999999999899999999976542 234431 1 2 4569999999999996
Q ss_pred cC--CceeeEEcCCchhhhhcceeeEEEEecCCC
Q 009171 119 KD--QIGTFNYFPSTKVHRAFGGFGAVNVAQRSV 150 (541)
Q Consensus 119 ~~--~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (541)
.+ .+|+||||||...|...||.|.|+|++++.
T Consensus 235 ~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 235 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred ccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 32 599999999999999999999999999754
No 56
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.52 E-value=3.7e-13 Score=142.80 Aligned_cols=233 Identities=13% Similarity=0.119 Sum_probs=150.1
Q ss_pred eeeEEEECCCC---------cCceEEEecCCEEEEEEEECC-CCCeeEeeCCcCCCCCCCCCCCCC----C-CCccCCCC
Q 009171 46 PQQGILINGQF---------PGPAIEAVTNDNIIVNLINKL-DEPFLITWNGVKQRRTTWQDGVLG----T-NCPIPPNS 110 (541)
Q Consensus 46 ~~~~~~~Ng~~---------pGP~i~v~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~ 110 (541)
....+++||+- +-|.|+|++|+++++|+.|.. .....+|++|..... -..||.+. + ...|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCce
Confidence 35689999962 347899999999999999986 456788888876443 56899853 2 45699999
Q ss_pred eEEEEEEecCCceeeEEcCCch---hhhhcceeeEEEEecCCCCCCCCCCCCC-ceEEEEccccccCCCHH---------
Q 009171 111 NWTYKFQMKDQIGTFNYFPSTK---VHRAFGGFGAVNVAQRSVISVPYHIPDG-EFTLLVSDWFKNFSSHK--------- 177 (541)
Q Consensus 111 ~~~y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~l~d~~~~~~~~~--------- 177 (541)
+++..+++.+.+|.||.++... .....|...+++.........|...... .. ..+.+..+..-...
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHT-KCLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCS-SBCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCc-cccccccccccccccCCCccCCC
Confidence 9999999755569999987643 1122333335554442211111100000 00 00111111100000
Q ss_pred HHHHHHhcCCCCCCCCeEEEcCCCCC------------------------ccEEEecCCEEEEEEEEcCCCCeEEEEEcC
Q 009171 178 ALQKRLEDGYSLPVPDALLINGHHNS------------------------LSFTGQKGKTYKFRVSNVGIATSINFRIQG 233 (541)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~lvNG~~~~------------------------p~l~v~~G~~~rlRliNa~~~~~~~~~i~~ 233 (541)
.....+... .......++|||+... +.+.++.|++++|.|.|......+.||+||
T Consensus 325 ~~d~~~~l~-~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHG 403 (495)
T 3t6v_A 325 GADCNLNLS-LGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHG 403 (495)
T ss_dssp CSSEEEECC-EEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETT
T ss_pred CCcEEEEEE-EEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecC
Confidence 000000000 0001136789997631 237899999999999843344567999999
Q ss_pred ceeEEEeecCccc----ceeeeeEEEEcC-CceEEEEEEeCCCCceeEEEEecc
Q 009171 234 HTLTLVEVEGAHC----LQESYESIDIHV-GQSVAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 234 h~~~via~DG~~~----~p~~~d~v~l~p-geR~dv~v~~~~~~g~~~i~~~~~ 282 (541)
|.|+|++.+|... .|...|++.+.+ |+.+.+.++++ .||.|.+|||..
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~ 456 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHID 456 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCH
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecch
Confidence 9999999988654 588899999997 99999999998 799999999954
No 57
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.49 E-value=8.7e-13 Score=139.14 Aligned_cols=235 Identities=16% Similarity=0.172 Sum_probs=157.5
Q ss_pred EEEEEEEEEEEeCCCCe-------------eeeEEEECCCCcCceEEEecCCEEEEEEEECC-CCCeeEeeCCcCCCCCC
Q 009171 29 RSYTWTVTYGTISPFGV-------------PQQGILINGQFPGPAIEAVTNDNIIVNLINKL-DEPFLITWNGVKQRRTT 94 (541)
Q Consensus 29 ~~~~l~~~~~~~~~~g~-------------~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~ 94 (541)
..| |.++......+|. ....+++||+. .|+|+|++|+ ++|+.|.. .....+|++|..... -
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 445 7777665544442 34678999985 6899999999 99999997 566889998876443 5
Q ss_pred CCCCC----CC-C-CCccCCCCeEEEEEEecCCceeeEEcCCchhhhhccee----------eEEEEecCCCCCCC----
Q 009171 95 WQDGV----LG-T-NCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFGGF----------GAVNVAQRSVISVP---- 154 (541)
Q Consensus 95 ~~DG~----~~-~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~----------G~liV~~~~~~~~~---- 154 (541)
+.||. |. + ...|.|||+++..+++ .+.|+|..-++.... .|+. .-+-+... ....|
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~-~~~lP~~l~ 331 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKKE-NVELPKNLK 331 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEECC-CCCCCSCSC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccc--cCccccCCCCceeEEEEecCCC-CccCCcccc
Confidence 67874 22 2 4579999999999997 457887776653221 1111 11112211 01111
Q ss_pred ----CCCCCCceEEEEccccccCC-----CHHHHHHHHhcCCCCCCCCeEEEcCCCCC---ccEEEecCCEEEEEEEEcC
Q 009171 155 ----YHIPDGEFTLLVSDWFKNFS-----SHKALQKRLEDGYSLPVPDALLINGHHNS---LSFTGQKGKTYKFRVSNVG 222 (541)
Q Consensus 155 ----~~~~~~e~~l~l~d~~~~~~-----~~~~~~~~~~~~~~~~~~~~~lvNG~~~~---p~l~v~~G~~~rlRliNa~ 222 (541)
.+..+....+.++....+.. ........+ ...++|||+... +.++++.|++++|+|+|.+
T Consensus 332 ~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~ 403 (481)
T 3zx1_A 332 IFKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIAL--------ASMFLINRKSYDLKRIDLSSKLGVVEDWIVINKS 403 (481)
T ss_dssp CCCCCCCCCEEEEEEEEECCSTTTTGGGCCHHHHHHHH--------HTTEEETTBCCCTTCCCEEEETTCCEEEEEEECS
T ss_pred CCCCCCCCCcEEEEEEeccchhcccccccccccccccc--------cceeEECCEeCCCCCceEEeCCCCEEEEEEEcCC
Confidence 11112233333322110000 000000000 125999999752 5699999999999999976
Q ss_pred CCCeEEEEEcCceeEEEee--cCcccc---eeeeeEEEEcCCceEEEEEEeCCCCceeEEEEecc
Q 009171 223 IATSINFRIQGHTLTLVEV--EGAHCL---QESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 223 ~~~~~~~~i~~h~~~via~--DG~~~~---p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 282 (541)
. ..+.||||||.|+|++. +|.... +...|++.|.||+++.|.++++ .+|.|.+|||..
T Consensus 404 ~-~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG~w~~HCHil 466 (481)
T 3zx1_A 404 H-MDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKGLRMYHCHIL 466 (481)
T ss_dssp S-SCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCEEEEEEESSH
T ss_pred C-CceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCeeEEEEcCCh
Confidence 5 56799999999999999 998763 5679999999999999999997 799999999964
No 58
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.46 E-value=1.9e-12 Score=137.38 Aligned_cols=233 Identities=11% Similarity=0.102 Sum_probs=148.6
Q ss_pred eeeEEEECCCC--------cCceEEEecCCEEEEEEEECC-CCCeeEeeCCcCCCCCCCCCCCCC----C-CCccCCCCe
Q 009171 46 PQQGILINGQF--------PGPAIEAVTNDNIIVNLINKL-DEPFLITWNGVKQRRTTWQDGVLG----T-NCPIPPNSN 111 (541)
Q Consensus 46 ~~~~~~~Ng~~--------pGP~i~v~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~~ 111 (541)
....+++||+- +-|.|+|++|+++++|+.|.. .....+|++|..... -..||.+. + ...|.|||+
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcE
Confidence 35688999973 347999999999999999987 456788888876543 56899853 1 446999999
Q ss_pred EEEEEEecCCceeeEEcCCch--h-hhhcceeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCH----H-----HH
Q 009171 112 WTYKFQMKDQIGTFNYFPSTK--V-HRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSH----K-----AL 179 (541)
Q Consensus 112 ~~y~f~~~~~~Gt~wYH~H~~--~-q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~----~-----~~ 179 (541)
++..+++.+.+|.||..+... . ....|..-+++.........|........ ..+.+..+..-.. . ..
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCC
Confidence 999999755579999987642 1 11122222444443221111110000000 0011111110000 0 00
Q ss_pred HHHHhcCCCCCCCCeEEEcCCCCC------------------------ccEEEecCCEEEEEEEEcC--CCCeEEEEEcC
Q 009171 180 QKRLEDGYSLPVPDALLINGHHNS------------------------LSFTGQKGKTYKFRVSNVG--IATSINFRIQG 233 (541)
Q Consensus 180 ~~~~~~~~~~~~~~~~lvNG~~~~------------------------p~l~v~~G~~~rlRliNa~--~~~~~~~~i~~ 233 (541)
...+... .......++|||+... +.+.++.|++++|.|.|.+ ....+.||+||
T Consensus 323 d~~~~l~-~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHG 401 (499)
T 3pxl_A 323 DKAINMA-FNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHG 401 (499)
T ss_dssp SEEEECC-EEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETT
T ss_pred cEEEEEE-EEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecC
Confidence 0000000 0001236789997531 2478999999999999422 23457999999
Q ss_pred ceeEEEeecCccc----ceeeeeEEEEcC---CceEEEEEEeCCCCceeEEEEecc
Q 009171 234 HTLTLVEVEGAHC----LQESYESIDIHV---GQSVAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 234 h~~~via~DG~~~----~p~~~d~v~l~p---geR~dv~v~~~~~~g~~~i~~~~~ 282 (541)
|.|+|++.+|... .|...|++.+.+ |+.+.+.++++ .||.|.+|||..
T Consensus 402 h~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~ 456 (499)
T 3pxl_A 402 HTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHID 456 (499)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCCh
Confidence 9999999887653 588999999986 99999999998 799999999953
No 59
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.46 E-value=2.1e-13 Score=115.30 Aligned_cols=105 Identities=17% Similarity=0.134 Sum_probs=79.8
Q ss_pred EEEEEEEEEEEe-----CCCCeeeeE-EEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCC
Q 009171 29 RSYTWTVTYGTI-----SPFGVPQQG-ILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGT 102 (541)
Q Consensus 29 ~~~~l~~~~~~~-----~~~g~~~~~-~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~ 102 (541)
+.|.+.+.+... ..+|..... ..||++|+.|.|++++||+|+++++|.... +||+.... .| +
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~---~ 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FG---V 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GT---E
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CC---c
Confidence 345566655443 235666665 589999999999999999999999999765 55554321 12 2
Q ss_pred CCccCCCCeEEEEEEecCCceeeEEcCCchhhhhcceeeEEEEec
Q 009171 103 NCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFGGFGAVNVAQ 147 (541)
Q Consensus 103 q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (541)
+..+.||++++|.|++ +++|+||||||.+..... |.|.|+|.+
T Consensus 70 ~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 4679999999999995 789999999998865444 999999974
No 60
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.46 E-value=3e-13 Score=120.58 Aligned_cols=98 Identities=18% Similarity=0.226 Sum_probs=72.0
Q ss_pred CeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCC------CCCCC--CCccCCCC--eEE
Q 009171 44 GVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQD------GVLGT--NCPIPPNS--NWT 113 (541)
Q Consensus 44 g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~D------G~~~~--q~~i~pG~--~~~ 113 (541)
|.....+.++|. ++|+|+|++||+|+|+++|... ...|.+.+...++...+ ..++. ...|.||+ +.+
T Consensus 47 ~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 47 GFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp TSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEE
Confidence 444445556665 6899999999999999999732 33566666543333222 11110 12689999 999
Q ss_pred EEEEecCCceeeEEcCCchhhhhcceeeEEEEe
Q 009171 114 YKFQMKDQIGTFNYFPSTKVHRAFGGFGAVNVA 146 (541)
Q Consensus 114 y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (541)
|.|++ ++|+||||||...|...||+|.|+|+
T Consensus 124 ~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99994 79999999999899999999999985
No 61
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.44 E-value=7.5e-12 Score=134.30 Aligned_cols=230 Identities=9% Similarity=0.089 Sum_probs=146.6
Q ss_pred eeEEEECCCCcCceEEEecCCEEEEEEEECC-CCCeeEeeCCcCCCCCCCCCCCCC----C-CCccCCCCeEEEEEEecC
Q 009171 47 QQGILINGQFPGPAIEAVTNDNIIVNLINKL-DEPFLITWNGVKQRRTTWQDGVLG----T-NCPIPPNSNWTYKFQMKD 120 (541)
Q Consensus 47 ~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~~~~y~f~~~~ 120 (541)
...+++||+. .|+|+|++|+++++||.|.. .....+|++|..... -..||.+. + ...|.|||+++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4578999985 69999999999999999997 446788888875443 56799743 2 457999999999999753
Q ss_pred C-ceeeEEcCCchhhhh-------cceeeEEEEecCCC-CCCCCCCCCCceEEEEccccccCC--------CHHHHHHHH
Q 009171 121 Q-IGTFNYFPSTKVHRA-------FGGFGAVNVAQRSV-ISVPYHIPDGEFTLLVSDWFKNFS--------SHKALQKRL 183 (541)
Q Consensus 121 ~-~Gt~wYH~H~~~q~~-------~Gl~G~liV~~~~~-~~~~~~~~~~e~~l~l~d~~~~~~--------~~~~~~~~~ 183 (541)
+ .|.||.......... .....+++..+... .+.+.. ..++...+.|..+... .+..+.-.+
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~--~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~ 322 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNY--VDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDV 322 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCC--CSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCc--ccccccccccccceeCCCCCCCCCCCeEEEEEE
Confidence 3 578999876542210 11112333332211 111100 0000000001000000 000000000
Q ss_pred hcCCCCCCCCeEEEcCCCC---------------------------CccEEEecCCEEEEEEEEcCCCCeEEEEEcCcee
Q 009171 184 EDGYSLPVPDALLINGHHN---------------------------SLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTL 236 (541)
Q Consensus 184 ~~~~~~~~~~~~lvNG~~~---------------------------~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~ 236 (541)
...........++|||+.. ...+.++.|++++|.|.|.+. ..+.||||||.|
T Consensus 323 ~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~-~~HP~HLHGh~F 401 (534)
T 1zpu_A 323 VMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDT-GTHPFHLHGHAF 401 (534)
T ss_dssp EEEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSS-SCEEEEETTCCE
T ss_pred EeeccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCC-CCCCeEecCCce
Confidence 0000001123578888853 124789999999999999875 467999999999
Q ss_pred EEEeecCc--------------------ccceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEecc
Q 009171 237 TLVEVEGA--------------------HCLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 237 ~via~DG~--------------------~~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 282 (541)
+|++.++. ...|...|++.+.||+.+.|.|+++ .||.|.+|||..
T Consensus 402 ~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCHi~ 466 (534)
T 1zpu_A 402 QTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCHIE 466 (534)
T ss_dssp EEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEECCH
T ss_pred EEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeCch
Confidence 99998853 1246789999999999999999998 799999999954
No 62
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.44 E-value=3.3e-12 Score=137.99 Aligned_cols=203 Identities=10% Similarity=0.065 Sum_probs=134.7
Q ss_pred eEEEecCCEEEEEEEECCC-CCeeEeeCCcCCCCCCCCCCCCC----C-CCccCCCCeEEEEEEe-cCCceeeEEcCCch
Q 009171 60 AIEAVTNDNIIVNLINKLD-EPFLITWNGVKQRRTTWQDGVLG----T-NCPIPPNSNWTYKFQM-KDQIGTFNYFPSTK 132 (541)
Q Consensus 60 ~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~~~~y~f~~-~~~~Gt~wYH~H~~ 132 (541)
+|+|++|+++++||.|... ....+|++|..... -+.||.+. + ...|.|||+++..+++ ++.+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999974 45688888876543 46899743 2 5579999999999997 34589999998864
Q ss_pred hhhhcce--eeEEEEecCCCCCCC------CC--------------------------CCCCceEEEEccccccCCCHHH
Q 009171 133 VHRAFGG--FGAVNVAQRSVISVP------YH--------------------------IPDGEFTLLVSDWFKNFSSHKA 178 (541)
Q Consensus 133 ~q~~~Gl--~G~liV~~~~~~~~~------~~--------------------------~~~~e~~l~l~d~~~~~~~~~~ 178 (541)
.-..... .+.|-.........+ .+ ..++.+.+.+..-.
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~-------- 355 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNV-------- 355 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEE--------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEeecc--------
Confidence 2101111 222323222110000 00 00111111110000
Q ss_pred HHHHHhcCCCCCCCCeEEEcCCCC----------------------------------------------CccEEEecCC
Q 009171 179 LQKRLEDGYSLPVPDALLINGHHN----------------------------------------------SLSFTGQKGK 212 (541)
Q Consensus 179 ~~~~~~~~~~~~~~~~~lvNG~~~----------------------------------------------~p~l~v~~G~ 212 (541)
......++|||+.. ...+.++.|+
T Consensus 356 ----------~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~ 425 (552)
T 1aoz_A 356 ----------INGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGE 425 (552)
T ss_dssp ----------ETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTC
T ss_pred ----------CCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCC
Confidence 00001244554421 1347889999
Q ss_pred EEEEEEEEcCC-----CCeEEEEEcCceeEEEeec-Ccc----------cceeeeeEEEEcCCceEEEEEEeCCCCceeE
Q 009171 213 TYKFRVSNVGI-----ATSINFRIQGHTLTLVEVE-GAH----------CLQESYESIDIHVGQSVAVVVAMHGPPKDYY 276 (541)
Q Consensus 213 ~~rlRliNa~~-----~~~~~~~i~~h~~~via~D-G~~----------~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~ 276 (541)
+++|.|.|.+. ...+.||||||.|+|++.. |.+ ..|...|++.+.||+.+.+.++++ .||.|.
T Consensus 426 ~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~ 504 (552)
T 1aoz_A 426 VVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWA 504 (552)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEE
T ss_pred EEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEE
Confidence 99999999875 3468999999999999984 553 257789999999999999999998 799999
Q ss_pred EEEecc
Q 009171 277 IVASTR 282 (541)
Q Consensus 277 i~~~~~ 282 (541)
+|||..
T Consensus 505 ~HCHi~ 510 (552)
T 1aoz_A 505 FHCHIE 510 (552)
T ss_dssp EEESSH
T ss_pred EEeeeh
Confidence 999964
No 63
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.42 E-value=1.1e-11 Score=133.78 Aligned_cols=234 Identities=8% Similarity=0.012 Sum_probs=146.1
Q ss_pred eeEEEECCCCc--------CceEEEecCCEEEEEEEECCC-CCeeEeeCCcCCCCCCCCCCCCC----C-CCccCCCCeE
Q 009171 47 QQGILINGQFP--------GPAIEAVTNDNIIVNLINKLD-EPFLITWNGVKQRRTTWQDGVLG----T-NCPIPPNSNW 112 (541)
Q Consensus 47 ~~~~~~Ng~~p--------GP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~~~ 112 (541)
...+++||+.. -|+|+|++|+++++||.|... ....+|++|..... -..||.+. + ...|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 45789999863 379999999999999999984 46789998876543 46799853 2 5579999999
Q ss_pred EEEEEecCCceeeEEcCCc--hhh---hhcceeeEEEEecCCCCCCCCCC----CC----CceEE-EEccccccCC---C
Q 009171 113 TYKFQMKDQIGTFNYFPST--KVH---RAFGGFGAVNVAQRSVISVPYHI----PD----GEFTL-LVSDWFKNFS---S 175 (541)
Q Consensus 113 ~y~f~~~~~~Gt~wYH~H~--~~q---~~~Gl~G~liV~~~~~~~~~~~~----~~----~e~~l-~l~d~~~~~~---~ 175 (541)
+..+++++.+|.||..... ... .......+++.........|... .+ .+..+ -+........ .
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999975557999988765 211 11111123333322111111100 00 00000 0000000000 0
Q ss_pred HHHHHHHHhcCCCCCCCCeEEEcCCCCC-----c-----------------cEEEecCCEEEEEEEEcCC----CCeEEE
Q 009171 176 HKALQKRLEDGYSLPVPDALLINGHHNS-----L-----------------SFTGQKGKTYKFRVSNVGI----ATSINF 229 (541)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~lvNG~~~~-----p-----------------~l~v~~G~~~rlRliNa~~----~~~~~~ 229 (541)
.....-.+...........++|||+... | .+.++.++.+++.++|... ...+.|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 0000000000000112246899998641 2 2677777777777777654 567899
Q ss_pred EEcCceeEEEeecC---------cc------------cceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEecc
Q 009171 230 RIQGHTLTLVEVEG---------AH------------CLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 230 ~i~~h~~~via~DG---------~~------------~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 282 (541)
|||||.|+|++.++ +. ..|...|++.+.+|+++.+.|+++ .||.|.+|||..
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil 506 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIA 506 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecch
Confidence 99999999999987 32 146789999999999999999988 799999999964
No 64
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.38 E-value=1.3e-11 Score=129.65 Aligned_cols=225 Identities=12% Similarity=0.104 Sum_probs=150.1
Q ss_pred EEEEEEEEEEEeCC-------------CCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCC-CCeeEee--CC---cC
Q 009171 29 RSYTWTVTYGTISP-------------FGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLD-EPFLITW--NG---VK 89 (541)
Q Consensus 29 ~~~~l~~~~~~~~~-------------~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~-~~~~iH~--HG---~~ 89 (541)
+++.|.+++..... .|.....+++||+. .|+|+|++| ++++|+.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56677776654332 12345678999985 699999999 99999999984 5678999 77 43
Q ss_pred CCCCCCCCCCCC-----C-CCccCCCCeEEEEEEecCCceeeEEcCCchhhhhc---c----------eeeE--EEEecC
Q 009171 90 QRRTTWQDGVLG-----T-NCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAF---G----------GFGA--VNVAQR 148 (541)
Q Consensus 90 ~~~~~~~DG~~~-----~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~---G----------l~G~--liV~~~ 148 (541)
... -..||.+. + ...|.|||+++..++++ .+.||..++....... + -... |.+.+.
T Consensus 216 ~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRL-IAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEE-EEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 322 46798742 2 45689999999999974 5788988764321000 0 1111 222221
Q ss_pred CCCCCC--CC-------CCCCceEEEEccccccCCCHHHHHHHHhcCCCCCCCCeEEEcCCCC---CccEE-EecCCEEE
Q 009171 149 SVISVP--YH-------IPDGEFTLLVSDWFKNFSSHKALQKRLEDGYSLPVPDALLINGHHN---SLSFT-GQKGKTYK 215 (541)
Q Consensus 149 ~~~~~~--~~-------~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~lvNG~~~---~p~l~-v~~G~~~r 215 (541)
...+.| .. ....+..+.+. .+ ...++|||+.. .+.+. ++.|++++
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~-----------------~~-----~~~~~iNg~~~~~~~p~~~~~~~g~~v~ 350 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALS-----------------LS-----GMQWTINGMFWNASNPLFEHVSVEGVEL 350 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEE-----------------EE-----TTEEEETTBCCCTTCTTCCCEEECEEEE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEe-----------------CC-----CceeeECCCcCCCCCCceeccCCCCeEE
Confidence 111000 00 00011111110 00 12589999974 24567 99999999
Q ss_pred EEEEEcCCCCeEEEEEcCceeEEEeecCccc------------ce---eeeeEEEEcCCceEEEEEEeC---C-CCceeE
Q 009171 216 FRVSNVGIATSINFRIQGHTLTLVEVEGAHC------------LQ---ESYESIDIHVGQSVAVVVAMH---G-PPKDYY 276 (541)
Q Consensus 216 lRliNa~~~~~~~~~i~~h~~~via~DG~~~------------~p---~~~d~v~l~pgeR~dv~v~~~---~-~~g~~~ 276 (541)
|+|.|.+....+.||||||.|+|++.+|... .| ...|++.+.||+++.+.+++. . .| |.
T Consensus 351 ~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~ 428 (448)
T 3aw5_A 351 WEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FP 428 (448)
T ss_dssp EEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EE
T ss_pred EEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EE
Confidence 9999998445679999999999999999874 23 579999999999999996664 2 45 99
Q ss_pred EEEecc
Q 009171 277 IVASTR 282 (541)
Q Consensus 277 i~~~~~ 282 (541)
+|||..
T Consensus 429 ~HCHil 434 (448)
T 3aw5_A 429 FHCHNL 434 (448)
T ss_dssp EEESSH
T ss_pred EEcCCh
Confidence 999964
No 65
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.38 E-value=9.9e-12 Score=131.05 Aligned_cols=248 Identities=15% Similarity=0.147 Sum_probs=155.2
Q ss_pred EEEEEEEEEEEeCCCC--------------eeeeEEEECCCCcCceEEEecCCEEEEEEEECC-CCCeeEee-CCcCCCC
Q 009171 29 RSYTWTVTYGTISPFG--------------VPQQGILINGQFPGPAIEAVTNDNIIVNLINKL-DEPFLITW-NGVKQRR 92 (541)
Q Consensus 29 ~~~~l~~~~~~~~~~g--------------~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l-~~~~~iH~-HG~~~~~ 92 (541)
.++.|.+++.....+| .....+++||+. .|.+.+ +|+++++|+.|.. .....+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 4667777776554433 233578999985 588876 6789999999997 45667887 5654332
Q ss_pred CCCCCCCC----C-C-CCccCCCCeEEEEEEecCCceeeEEcCCchhhhh------cceeeEEEEecC---CCCCCCC--
Q 009171 93 TTWQDGVL----G-T-NCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRA------FGGFGAVNVAQR---SVISVPY-- 155 (541)
Q Consensus 93 ~~~~DG~~----~-~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~------~Gl~G~liV~~~---~~~~~~~-- 155 (541)
-..||.+ . + ...|.|||+++..++++ +.+.|+.-+....... ..-.-.+-|.+. +....|.
T Consensus 229 -Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 229 -IASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp -EEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred -EEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 5689853 2 2 55799999999999974 5677776543221100 000001222221 1111110
Q ss_pred ---C---C----CCCceEEEEccccccCCCHHHHHHHHh----cCC----------CC-C----------CCCeEEEcCC
Q 009171 156 ---H---I----PDGEFTLLVSDWFKNFSSHKALQKRLE----DGY----------SL-P----------VPDALLINGH 200 (541)
Q Consensus 156 ---~---~----~~~e~~l~l~d~~~~~~~~~~~~~~~~----~~~----------~~-~----------~~~~~lvNG~ 200 (541)
+ . ..+++.+.+... .+......+.+.+. .+. .+ . ....++|||+
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~ 385 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPM-LDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQ 385 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHH-HHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTB
T ss_pred ccCCCCcccccccceEEEEEeccc-ccccccccccccccccccccccccccccccccCccccccccccccccceeeECCe
Confidence 0 0 112333433210 00000000100000 000 00 0 0124799999
Q ss_pred CC---CccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccce---eeeeEEEEcCCceEEEEEEeCC---C
Q 009171 201 HN---SLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQ---ESYESIDIHVGQSVAVVVAMHG---P 271 (541)
Q Consensus 201 ~~---~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p---~~~d~v~l~pgeR~dv~v~~~~---~ 271 (541)
.. .+.++++.|+++||+|+|.+....+.||||+|.|+|++.||....+ ...|++.|. |++..|+|+++. .
T Consensus 386 ~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~ 464 (488)
T 3od3_A 386 AFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPK 464 (488)
T ss_dssp CCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCG
T ss_pred eCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCC
Confidence 74 3568999999999999999976678999999999999999987753 468999999 999999999974 3
Q ss_pred CceeEEEEecc
Q 009171 272 PKDYYIVASTR 282 (541)
Q Consensus 272 ~g~~~i~~~~~ 282 (541)
+|.|.+|||..
T Consensus 465 ~G~~m~HCH~l 475 (488)
T 3od3_A 465 EHAYMAHCHLL 475 (488)
T ss_dssp GGCEEEEESSH
T ss_pred CCCEEEeCCch
Confidence 67999999964
No 66
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.37 E-value=1.1e-12 Score=133.08 Aligned_cols=104 Identities=18% Similarity=0.266 Sum_probs=84.3
Q ss_pred EEECCCC--cCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCC---C----C-C-CCccCCCCeEEEEEEe
Q 009171 50 ILINGQF--PGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGV---L----G-T-NCPIPPNSNWTYKFQM 118 (541)
Q Consensus 50 ~~~Ng~~--pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~---~----~-~-q~~i~pG~~~~y~f~~ 118 (541)
|+|||+. ..|+|++++||+|++++.|.....+.+|+||...... .+|. | . . ...|.||++++|.|+.
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 4789999999999999999998999999999864321 2332 1 1 1 3469999999999996
Q ss_pred --cCCceeeEEcCCchhhhhcceeeEEEEecCCCCCCCC
Q 009171 119 --KDQIGTFNYFPSTKVHRAFGGFGAVNVAQRSVISVPY 155 (541)
Q Consensus 119 --~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~ 155 (541)
++.+|+|+||||...+...||.|.++|.+++.....|
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~~P~y 314 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGY 314 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSCCSCC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCCCCCC
Confidence 3579999999999999999999999999876443333
No 67
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.33 E-value=3.1e-12 Score=136.41 Aligned_cols=95 Identities=18% Similarity=0.144 Sum_probs=74.7
Q ss_pred CCeeeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCc
Q 009171 43 FGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQI 122 (541)
Q Consensus 43 ~g~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~ 122 (541)
+++...+|++|++||+|+|+|++||+|+++++|.+...-. +||+.+.. .|+ +..+.||++++|.|++ +++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSC
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCC
Confidence 4678889999999999999999999999999998653111 35554431 222 3679999999999995 789
Q ss_pred eeeEEcCCch---hhhhcceeeEEEEecCC
Q 009171 123 GTFNYFPSTK---VHRAFGGFGAVNVAQRS 149 (541)
Q Consensus 123 Gt~wYH~H~~---~q~~~Gl~G~liV~~~~ 149 (541)
|+||||||.. .| .||+|.|+|++++
T Consensus 567 GtY~yhC~e~Cg~~H--~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 567 GVYWYYCQWFCHALH--MEMRGRMLVEPKE 594 (595)
T ss_dssp EEEEEECCSCCSTTC--TTCEEEEEEECC-
T ss_pred EEEEEECCCCCCCCc--cCCEEEEEEEcCC
Confidence 9999999932 23 3999999999753
No 68
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.28 E-value=1.8e-10 Score=124.56 Aligned_cols=232 Identities=10% Similarity=0.033 Sum_probs=143.3
Q ss_pred eeEEEECCCCcCceEEEecCCEEEEEEEECC-CCCeeEeeCCc-------CCCCCCCCCCCCC----C-C-------Ccc
Q 009171 47 QQGILINGQFPGPAIEAVTNDNIIVNLINKL-DEPFLITWNGV-------KQRRTTWQDGVLG----T-N-------CPI 106 (541)
Q Consensus 47 ~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l-~~~~~iH~HG~-------~~~~~~~~DG~~~----~-q-------~~i 106 (541)
...+++||+ +.|.+.|++| ++++||.|.. .....+++.|. ... --..||.+. . + ..|
T Consensus 254 gd~~lVNG~-~~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~-vIa~DG~~l~~P~~~~~~~~~~~l~l 330 (612)
T 2g23_A 254 GPYTTVNGR-IWPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp CSEEEETTE-ESCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred CCEEEECCc-cCCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE-EEEeCCeEccCCEEecccCcccEEEE
Confidence 357899998 4799999999 9999999997 45667887654 111 145788743 1 3 358
Q ss_pred CCCCeEEEEEEecCCcee-eEEcCCchhhh------hc----ceeeEEEEecCC-CC--CCCCC------CCC-----Cc
Q 009171 107 PPNSNWTYKFQMKDQIGT-FNYFPSTKVHR------AF----GGFGAVNVAQRS-VI--SVPYH------IPD-----GE 161 (541)
Q Consensus 107 ~pG~~~~y~f~~~~~~Gt-~wYH~H~~~q~------~~----Gl~G~liV~~~~-~~--~~~~~------~~~-----~e 161 (541)
.|||+++.-+++.+.+|+ ++...-..... .. +..--|.|..+. .+ ..|-. ... ..
T Consensus 331 ~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~ 410 (612)
T 2g23_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGH 410 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEE
T ss_pred CCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccce
Confidence 999999999997655664 66654431110 00 111224454332 11 11110 000 00
Q ss_pred eEEEEc------------cccccC-CCHHHHH----HHHhcCCCCCCCCeEEEcCCCC--CccEEEecCCEEEEEEEEcC
Q 009171 162 FTLLVS------------DWFKNF-SSHKALQ----KRLEDGYSLPVPDALLINGHHN--SLSFTGQKGKTYKFRVSNVG 222 (541)
Q Consensus 162 ~~l~l~------------d~~~~~-~~~~~~~----~~~~~~~~~~~~~~~lvNG~~~--~p~l~v~~G~~~rlRliNa~ 222 (541)
..+.+. -|.... ...+.+. ..+...........++|||+.. .+.++++.|++++|+|+|.+
T Consensus 411 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~~~~~~v~~G~~v~w~l~N~~ 490 (612)
T 2g23_A 411 RLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFNDGLGFTIGEGTHEQWTFLNLS 490 (612)
T ss_dssp EEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTSCCCEEEETTCEEEEEEEECS
T ss_pred eEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCCCCceEecCCCEEEEEEEeCC
Confidence 122221 011110 0000000 0000000011123688999963 47899999999999999998
Q ss_pred CCCeEEEEEcCceeEEEeecCc------------------------cc---ceeeeeEEEEcCCceEEEEEEeCCCCcee
Q 009171 223 IATSINFRIQGHTLTLVEVEGA------------------------HC---LQESYESIDIHVGQSVAVVVAMHGPPKDY 275 (541)
Q Consensus 223 ~~~~~~~~i~~h~~~via~DG~------------------------~~---~p~~~d~v~l~pgeR~dv~v~~~~~~g~~ 275 (541)
. ..+.||||+|.|+|++.+|. ++ ++...|++.+.||+++.|.++++..+|.|
T Consensus 491 ~-~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w 569 (612)
T 2g23_A 491 P-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRF 569 (612)
T ss_dssp S-SCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEE
T ss_pred C-CCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccE
Confidence 5 46799999999999987542 11 22368999999999999999998679999
Q ss_pred EEEEecc
Q 009171 276 YIVASTR 282 (541)
Q Consensus 276 ~i~~~~~ 282 (541)
.+|||..
T Consensus 570 ~~HCHil 576 (612)
T 2g23_A 570 MYHCHLL 576 (612)
T ss_dssp EEEESSH
T ss_pred EEEeCch
Confidence 9999964
No 69
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.25 E-value=2.6e-11 Score=101.01 Aligned_cols=78 Identities=17% Similarity=0.251 Sum_probs=62.5
Q ss_pred CCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCC-CCccCCCCeEEEEEEecCCceeeEEcCCc
Q 009171 53 NGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGT-NCPIPPNSNWTYKFQMKDQIGTFNYFPST 131 (541)
Q Consensus 53 Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~ 131 (541)
+..|..++|+|++||+|+ +.|..+..+++|+++. +||+... +..+.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~--~~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEE--EEECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 345567899999999965 5699888899999862 2565444 56699999999988 369999999998
Q ss_pred hhhhhcceeeEEEEe
Q 009171 132 KVHRAFGGFGAVNVA 146 (541)
Q Consensus 132 ~~q~~~Gl~G~liV~ 146 (541)
|. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 65 999999985
No 70
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.25 E-value=3.7e-11 Score=128.71 Aligned_cols=241 Identities=13% Similarity=0.076 Sum_probs=144.6
Q ss_pred eeEEEECCCCcCceEEEecCCEEEEEEEECCC-CCeeEeeCC-------cCCCCCCCCCCCC----C-C-CCccCCCCeE
Q 009171 47 QQGILINGQFPGPAIEAVTNDNIIVNLINKLD-EPFLITWNG-------VKQRRTTWQDGVL----G-T-NCPIPPNSNW 112 (541)
Q Consensus 47 ~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG-------~~~~~~~~~DG~~----~-~-q~~i~pG~~~ 112 (541)
...+++||+ +.|.|.|+.| ++++||.|... ....++++| .... --..||.+ . + ...|.|||++
T Consensus 201 gd~~lvNG~-~~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~-vIa~DG~~~~~P~~~~~l~l~pgeR~ 277 (534)
T 3abg_A 201 GDVIHVNGQ-PWPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFK-VIASDSGLLEHPADTSLLYISMAERY 277 (534)
T ss_dssp CSEEEETTE-ESCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEE-EEEETTEEEEEEEEESCEEECTTCEE
T ss_pred CceeccCCc-cCceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEE-EEEeCCCcccCceEeceEEECCccEE
Confidence 457899998 5799999985 99999999984 456888876 2222 14578852 2 2 5579999999
Q ss_pred EEEEEecCCce-eeEEcCCchhhhhcc-------eeeEEEEecCCCCCCCCCCCCCceEEEEccccccCCCHHHHHHHHh
Q 009171 113 TYKFQMKDQIG-TFNYFPSTKVHRAFG-------GFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSHKALQKRLE 184 (541)
Q Consensus 113 ~y~f~~~~~~G-t~wYH~H~~~q~~~G-------l~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~ 184 (541)
+..+++.+.+| +||...........| ..+.+-.........+- ....+..+....... ........+.
T Consensus 278 dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~---~~~~P~~L~~~~~p~-~~~~~~~~~~ 353 (534)
T 3abg_A 278 EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD---TSVVPANLRDVPFPS-PTTNTPRQFR 353 (534)
T ss_dssp EEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC---CCCCCCCCCCCSCCC-CCCCCCEEEE
T ss_pred EEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC---CCCCccccccCCCCC-CccccceEEE
Confidence 99999755477 688765321000000 11222221111000000 000000000000000 0000000000
Q ss_pred cCCCCCCCCeEEEcCCCCC----c-cEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEee-cCc---cc---ceeeee
Q 009171 185 DGYSLPVPDALLINGHHNS----L-SFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEV-EGA---HC---LQESYE 252 (541)
Q Consensus 185 ~~~~~~~~~~~lvNG~~~~----p-~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~-DG~---~~---~p~~~d 252 (541)
.+ .....++|||+... + .++++.|++++|.|.|.+....+.||||||.|+|++. +|. .. +....|
T Consensus 354 ~~---~~~~~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rD 430 (534)
T 3abg_A 354 FG---RTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKD 430 (534)
T ss_dssp CS---CCCSTTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBS
T ss_pred Ee---ccCceeEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcC
Confidence 00 01235789999752 2 3679999999999999886556799999999999998 663 11 124689
Q ss_pred EEEEcCCceEEEEEEeCCCCceeEEEEeccccCCCcceEEEEEecC
Q 009171 253 SIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKPILTTTAILHYDG 298 (541)
Q Consensus 253 ~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~~ 298 (541)
++.+.||+++.|.+.+.+.+|.|.+|||...-. .....+.+++..
T Consensus 431 TV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~-d~GMm~~~~V~~ 475 (534)
T 3abg_A 431 VVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHE-DHDMMAAFNATV 475 (534)
T ss_dssp EECCCSSEEEEEEEECCSCCEEEEEEESCHHHH-HTTCEEEEEECS
T ss_pred eEEcCCCCEEEEEEEECCCCccEEEecChHHHH-hcCCceEEEEEe
Confidence 999999999999998433799999999964211 123455566654
No 71
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.24 E-value=8.3e-11 Score=125.79 Aligned_cols=229 Identities=12% Similarity=0.080 Sum_probs=143.4
Q ss_pred eeEEEECCCCcCceEEEecCCEEEEEEEECCC-CCeeEeeCCc-CCCCCCCCCCCCC-----C-CCccCCCCeEEEEEEe
Q 009171 47 QQGILINGQFPGPAIEAVTNDNIIVNLINKLD-EPFLITWNGV-KQRRTTWQDGVLG-----T-NCPIPPNSNWTYKFQM 118 (541)
Q Consensus 47 ~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~-~~~~~~~~DG~~~-----~-q~~i~pG~~~~y~f~~ 118 (541)
...+++||+. .|.|.|+.| ++++|+.|... ....+|+.|. .... -+.||.+. + ...|.|||+++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQ-IGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEE-EccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 4678999985 799999885 99999999984 4578888776 3332 56799532 2 4568999999999997
Q ss_pred cCCceeeEE-cCCch--hhhhcceeeEEE-EecCC--CC----CCCCCCC----------CCceEEEEccccccCCCHHH
Q 009171 119 KDQIGTFNY-FPSTK--VHRAFGGFGAVN-VAQRS--VI----SVPYHIP----------DGEFTLLVSDWFKNFSSHKA 178 (541)
Q Consensus 119 ~~~~Gt~wY-H~H~~--~q~~~Gl~G~li-V~~~~--~~----~~~~~~~----------~~e~~l~l~d~~~~~~~~~~ 178 (541)
++.+|.++. ..-.. .....+....++ ..... .. ..|.... +.+..+.+...
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~--------- 377 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT--------- 377 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE---------
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee---------
Confidence 554676332 11110 000001112222 22111 00 0110000 00011111100
Q ss_pred HHHHHhcCCCCCCCCeEEEcCCCC--CccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCc------------
Q 009171 179 LQKRLEDGYSLPVPDALLINGHHN--SLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGA------------ 244 (541)
Q Consensus 179 ~~~~~~~~~~~~~~~~~lvNG~~~--~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~------------ 244 (541)
........++|||+.. ...+.++.|++++|+|.|.+.. .+.||||||.|+|++.+|.
T Consensus 378 --------~~~~g~~~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~ 448 (513)
T 2wsd_A 378 --------QDEYGRPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIARYQESGELS 448 (513)
T ss_dssp --------ECTTSCEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHHHHHHCCCC
T ss_pred --------cCCCCCceEeECCccCCCcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCccccccccccccc
Confidence 0000112578999974 2456889999999999998864 6799999999999998762
Q ss_pred ---c------cceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEeccccCCCcceEEEEEec
Q 009171 245 ---H------CLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRFTKPILTTTAILHYD 297 (541)
Q Consensus 245 ---~------~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~ail~y~ 297 (541)
+ -++...|++.|.||+++.|.+++++.+|.|.+|||...-. .....+.+++.
T Consensus 449 ~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~-~~GMm~~~~V~ 509 (513)
T 2wsd_A 449 YTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHE-DYDMMRPMDIT 509 (513)
T ss_dssp BSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHH-TTTCEEEEEEB
T ss_pred ccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhh-hcCCceeEEEe
Confidence 1 1235789999999999999999965799999999964211 12344555543
No 72
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.17 E-value=1.7e-09 Score=116.39 Aligned_cols=230 Identities=10% Similarity=0.009 Sum_probs=142.7
Q ss_pred eeEEEECCCCc----------------CceEEEecCCEEEEEEEECCC-CCeeEeeCCcCCCCCCCCCCCCC----C-CC
Q 009171 47 QQGILINGQFP----------------GPAIEAVTNDNIIVNLINKLD-EPFLITWNGVKQRRTTWQDGVLG----T-NC 104 (541)
Q Consensus 47 ~~~~~~Ng~~p----------------GP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~-q~ 104 (541)
....++||+.. -++|+|++|+++++|+.|... ....+|++|..... -+.||.+. + ..
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEE
Confidence 44688999742 379999999999999999974 45688888876543 56799853 2 45
Q ss_pred ccCCCCeEEEEEEecCCceeeEEcCCchhh----hhcceeeEEEEecCCCCCCCCCCC--CCceEEEEcc--ccccCCCH
Q 009171 105 PIPPNSNWTYKFQMKDQIGTFNYFPSTKVH----RAFGGFGAVNVAQRSVISVPYHIP--DGEFTLLVSD--WFKNFSSH 176 (541)
Q Consensus 105 ~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q----~~~Gl~G~liV~~~~~~~~~~~~~--~~e~~l~l~d--~~~~~~~~ 176 (541)
.|.|||+++..+++.+.+|.||........ ...+..-+++..+......|.... ..+.. +.+ ..+..-..
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~~--~~~~~~~L~P~~~ 381 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGTC--EDEPVASLVPHLA 381 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCCS--CCSCGGGCCBSSC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccchh--hcccccccccCCC
Confidence 789999999999986668999999875421 111122234444322111111000 00000 000 00000000
Q ss_pred HHHHH------HHhcCCCCCCCCeEEEcCCCC-----Cc-----------------cEEE----ecCCEEEEEEEEcCC-
Q 009171 177 KALQK------RLEDGYSLPVPDALLINGHHN-----SL-----------------SFTG----QKGKTYKFRVSNVGI- 223 (541)
Q Consensus 177 ~~~~~------~~~~~~~~~~~~~~lvNG~~~-----~p-----------------~l~v----~~G~~~rlRliNa~~- 223 (541)
..... .+..+ ......+.|||... .| .+.+ +.|+++.|.|-|.+.
T Consensus 382 ~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 382 LDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp CBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred CCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 00000 00000 00112456777642 01 1333 359999999999871
Q ss_pred CCeEEEEEcCceeEEEeecCc------------ccceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEecc
Q 009171 224 ATSINFRIQGHTLTLVEVEGA------------HCLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 224 ~~~~~~~i~~h~~~via~DG~------------~~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 282 (541)
...+.||+|||.|+|++.+.+ +..|...|++.+.|++...+.++++ .||.|.+|||..
T Consensus 460 ~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~ 529 (580)
T 3sqr_A 460 GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIA 529 (580)
T ss_dssp CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSH
T ss_pred ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcH
Confidence 247799999999999998543 2347889999999999999999998 799999999953
No 73
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.16 E-value=2.7e-11 Score=106.37 Aligned_cols=94 Identities=13% Similarity=0.090 Sum_probs=72.1
Q ss_pred EEecCCCcEEEEEEEcCCCC-CCceeecCCceEEEE------eccc---ccCccccccCcCCCCCccceEEeCCCCEEEE
Q 009171 415 VIPTTLHDYVEIVFQNNETS-VQSWHLDGSSFYVVG------YGSG---TWTADIRKRYNLNDAITRHTVQVYPQSWSAI 484 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl~------~g~g---~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~i 484 (541)
.+.++.|++|+|+|.|.+.. .|.||+|+....+.. ...+ .+.+.. ....++||..|.|++...|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~------~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD------KSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC------CTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcc------cccccccccccCCCCEEEE
Confidence 46789999999999999888 899999986532110 0000 111100 1234789999999999999
Q ss_pred EEEcCCcceeEEeechhhHhhcccEEEEEEe
Q 009171 485 YVSLDNKGVWNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 485 rf~~dnpG~w~~HCHil~H~d~GMm~~~~V~ 515 (541)
.|.+++||.|.||||+..|+. ||+..+.|.
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999999999 999999873
No 74
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.14 E-value=8.4e-11 Score=98.09 Aligned_cols=83 Identities=16% Similarity=0.289 Sum_probs=62.6
Q ss_pred CceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCC-----CCCCccCCCCeEEEEEEecCCceeeEEcCCch
Q 009171 58 GPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVL-----GTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTK 132 (541)
Q Consensus 58 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~-----~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~ 132 (541)
-+.|++++||+|++ .|.....+++|+|+.... ..+|.. .....+.||++++|.|++++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 47899999999755 588777888998876432 122310 002458999999999974368999999999
Q ss_pred hhhhcceeeEEEEec
Q 009171 133 VHRAFGGFGAVNVAQ 147 (541)
Q Consensus 133 ~q~~~Gl~G~liV~~ 147 (541)
.|...||.|.|+|++
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 677789999999974
No 75
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.13 E-value=5e-11 Score=99.24 Aligned_cols=85 Identities=18% Similarity=0.113 Sum_probs=66.2
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEc-CCcce
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSL-DNKGV 493 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~-dnpG~ 493 (541)
.+.++.|++|+| .|.+...|+||+||..|... . +. +. +....++..+.||+...++|.+ ++||.
T Consensus 20 ~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~--~-g~-~~---------~~~~~~~~~i~pG~~~~~~f~~~~~~G~ 84 (105)
T 3cvb_A 20 NVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA--S-KE-LA---------DKLSHSQLMFSPGESYEITFSSDFPAGT 84 (105)
T ss_dssp EEEECTTEEEEE--EECSSCCEEEEECTTSSGGG--C-HH-HH---------HHHCEEEEECSTTCEEEEEECTTSCSEE
T ss_pred EEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc--c-cc-cc---------ccccccccccCCCCeEEEEEecCCCCee
Confidence 578899999876 58888899999999876431 0 10 00 0012578999999999999998 78999
Q ss_pred eEEeechhhHhhcccEEEEEEec
Q 009171 494 WNLRSAIWERRYLGQELYLRVSN 516 (541)
Q Consensus 494 w~~HCHil~H~d~GMm~~~~V~~ 516 (541)
|.|||| .|...||+..+.|.+
T Consensus 85 y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 85 YTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp EEEECT--TTGGGTCEEEEEECC
T ss_pred EEEEeC--CchhcCCEEEEEEcC
Confidence 999999 599999999998853
No 76
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.07 E-value=4e-10 Score=112.75 Aligned_cols=94 Identities=10% Similarity=0.054 Sum_probs=77.7
Q ss_pred ccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCccc---ceeeeeEEEEcCCceEEEEEEeCC--CCceeEEE
Q 009171 204 LSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHC---LQESYESIDIHVGQSVAVVVAMHG--PPKDYYIV 278 (541)
Q Consensus 204 p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~---~p~~~d~v~l~pgeR~dv~v~~~~--~~g~~~i~ 278 (541)
+.++++.|++|||||+|++. ..+.|||+||.|++++.||... .|..+|++.|.||||++++|.+.+ .||.|.++
T Consensus 174 ~~l~v~~Ge~vr~~liN~g~-~~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~H 252 (313)
T 3tas_A 174 PDFEATVGDRVEFVMITHGE-YYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYH 252 (313)
T ss_dssp CCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred cccccccCCEEEEEEecccc-cceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEE
Confidence 46899999999999999996 4679999999999999998776 367899999999999999998763 58999999
Q ss_pred EeccccCCCcceEEEEEecCC
Q 009171 279 ASTRFTKPILTTTAILHYDGS 299 (541)
Q Consensus 279 ~~~~~~~~~~~~~ail~y~~~ 299 (541)
||... .......+++.++..
T Consensus 253 CHi~~-H~~~GM~~~f~V~~~ 272 (313)
T 3tas_A 253 CHVQS-HSDMGMVGLFLVKKP 272 (313)
T ss_dssp ECSHH-HHHTTCEEEEEEECT
T ss_pred eCChH-HHHCCCeEEEEEECC
Confidence 99642 122456777777643
No 77
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.99 E-value=1.5e-09 Score=95.15 Aligned_cols=90 Identities=11% Similarity=0.041 Sum_probs=66.8
Q ss_pred CCcCceEEEecCCEEEEEEEECCCC-CeeEeeCCcCCC-----------C----CCCCCCCCC-C--CCccCCCCeEEEE
Q 009171 55 QFPGPAIEAVTNDNIIVNLINKLDE-PFLITWNGVKQR-----------R----TTWQDGVLG-T--NCPIPPNSNWTYK 115 (541)
Q Consensus 55 ~~pGP~i~v~~Gd~v~v~~~N~l~~-~~~iH~HG~~~~-----------~----~~~~DG~~~-~--q~~i~pG~~~~y~ 115 (541)
+|--+.|+|++||+|+++|+|.... .++++.|+.... . ...-++.+. . ...|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 3445789999999999999999777 888888874210 0 000001111 1 2348999999999
Q ss_pred EEecCCceeeEEcCCchhhhhcceeeEEEEe
Q 009171 116 FQMKDQIGTFNYFPSTKVHRAFGGFGAVNVA 146 (541)
Q Consensus 116 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (541)
|++ +++|+|+||||...|.. ||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 995 67999999999988888 999999984
No 78
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.99 E-value=2.4e-09 Score=106.23 Aligned_cols=100 Identities=14% Similarity=0.128 Sum_probs=78.3
Q ss_pred EEECCCCc--CceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCC-------C-CCccCCCCeEEEEEEe-
Q 009171 50 ILINGQFP--GPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLG-------T-NCPIPPNSNWTYKFQM- 118 (541)
Q Consensus 50 ~~~Ng~~p--GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~-------~-q~~i~pG~~~~y~f~~- 118 (541)
|.+||+.- -|.|+++.||+|++++.|.....+++|+||..... ...++... . ...|.||+++++.+..
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v-~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHGSNFHTFHLHGHRWLD-NRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEESSCCCEEEETTCCEES-SSSSSCCSTTCCCCEESEEECCTTCEEEEEEETT
T ss_pred eeecCccccccccceecCCCEEEEEEEeccccceeeeEecceEEE-EecccccCCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 56788642 57899999999999999999889999999976432 11222211 1 2248999999999864
Q ss_pred -cCCceeeEEcCCchhhhhcceeeEEEEecCCC
Q 009171 119 -KDQIGTFNYFPSTKVHRAFGGFGAVNVAQRSV 150 (541)
Q Consensus 119 -~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (541)
++.+|+|+||||...+...||.|.+.|++.+.
T Consensus 258 ~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 258 EGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 23589999999999999999999999998754
No 79
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.95 E-value=1.8e-08 Score=110.45 Aligned_cols=89 Identities=10% Similarity=0.069 Sum_probs=73.3
Q ss_pred CeEEEcCCCC--CccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCccc------------------------
Q 009171 193 DALLINGHHN--SLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHC------------------------ 246 (541)
Q Consensus 193 ~~~lvNG~~~--~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~------------------------ 246 (541)
..+.+||+.. ...+.++.|++++|.|.|.+.. .+.||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (612)
T 3gyr_A 459 KTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEEECSTTSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred ccccccCccCCCCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCc
Confidence 4567888863 2568899999999999999875 569999999999999876422
Q ss_pred ---ceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEecc
Q 009171 247 ---LQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTR 282 (541)
Q Consensus 247 ---~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 282 (541)
++...|++.+.+|+.+.|.+++.+.+|.|.+|||..
T Consensus 538 ~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp CTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred ccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCCh
Confidence 122479999999999999999765899999999965
No 80
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.90 E-value=1.1e-08 Score=89.62 Aligned_cols=91 Identities=14% Similarity=0.128 Sum_probs=66.4
Q ss_pred CcCceEEEecCCEEEEEEEE--CCCCCeeEeeCCcC------------CC----CCCCCCCCCCC--CCccCCCCeEEEE
Q 009171 56 FPGPAIEAVTNDNIIVNLIN--KLDEPFLITWNGVK------------QR----RTTWQDGVLGT--NCPIPPNSNWTYK 115 (541)
Q Consensus 56 ~pGP~i~v~~Gd~v~v~~~N--~l~~~~~iH~HG~~------------~~----~~~~~DG~~~~--q~~i~pG~~~~y~ 115 (541)
|--+.|+|++||+|+++++| .....++++.+... .. --+..|..... ...|.||++.++.
T Consensus 30 F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 30 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 33479999999999999999 66677777776310 00 00000111001 2458999999999
Q ss_pred EEecCCceeeEEcCCchhhhhcceeeEEEEec
Q 009171 116 FQMKDQIGTFNYFPSTKVHRAFGGFGAVNVAQ 147 (541)
Q Consensus 116 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (541)
|++ +.+|+|||||+...+...||.|.|+|.+
T Consensus 110 ~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 110 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 996 6799999999998888899999999974
No 81
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.86 E-value=7.5e-09 Score=85.17 Aligned_cols=79 Identities=18% Similarity=0.141 Sum_probs=63.7
Q ss_pred CCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCch
Q 009171 53 NGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTK 132 (541)
Q Consensus 53 Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~ 132 (541)
|..|--..|++++||+|++.++|.....+++...+... ...+.||++.++.|+. +++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t~-~~~G~Y~y~C~~- 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVKP-KSAGTYELICRY- 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEECC-CSCEEEEEECTT-
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEec-ccCceEEEECcc-
Confidence 44554568999999999999999987777776665422 1347899999999994 789999999975
Q ss_pred hhhhcceeeEEEEe
Q 009171 133 VHRAFGGFGAVNVA 146 (541)
Q Consensus 133 ~q~~~Gl~G~liV~ 146 (541)
+...||.|.|+|+
T Consensus 88 -H~~~gM~G~i~Ve 100 (100)
T 4hci_A 88 -HLLKGMEGKVIVK 100 (100)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -ccCCCCEEEEEEC
Confidence 5567999999996
No 82
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.83 E-value=6.1e-09 Score=86.64 Aligned_cols=84 Identities=15% Similarity=0.152 Sum_probs=63.1
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEc-CCcce
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSL-DNKGV 493 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~-dnpG~ 493 (541)
.+.++.|++|+|+ |.+...|+||+|+..+.. . .|. + .. ...+|++.+.||+...+.|.+ +.||.
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~--~-~g~-~---~~------~~~~~~~~~~pG~~~~~~f~~~~~~G~ 85 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA--K-SAD-L---AK------SLSHKQLLMSPGQSTSTTFPADAPAGE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCCCBEECSSSSTT--C-CHH-H---HH------HHCBCSCCCSTTCEEEEECCTTCCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCceEEEeCCCCcc--c-ccc-c---ch------hccccceeeCCCCEEEEEEecCCCCce
Confidence 5688999998885 777789999999764411 0 010 0 00 001467789999999998887 78999
Q ss_pred eEEeechhhHhhcccEEEEEEe
Q 009171 494 WNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 494 w~~HCHil~H~d~GMm~~~~V~ 515 (541)
|.|||| .|.+.||+..+.|.
T Consensus 86 y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 86 YTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--ChhhcCcEEEEEEc
Confidence 999999 69999999999885
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.79 E-value=5e-09 Score=85.84 Aligned_cols=80 Identities=14% Similarity=0.284 Sum_probs=58.8
Q ss_pred CceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCC--CCCCCCccCCCCeEEEEEEecCCceeeEEcCCchhhh
Q 009171 58 GPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDG--VLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHR 135 (541)
Q Consensus 58 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG--~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~ 135 (541)
-+.|++++||+|+ ++|.....+++|+|+...+ ...|. .+.....+.||+++++.|. ++|+|+|||+ .|.
T Consensus 17 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p--~~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~H~ 87 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNNAGFPHNIVFDEDAIP--SGVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--PHQ 87 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECGGGSC--TTCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--GGG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCC--CccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--Ccc
Confidence 3689999999865 5898878999999986332 11110 0000135789999999885 6999999999 466
Q ss_pred hcceeeEEEEe
Q 009171 136 AFGGFGAVNVA 146 (541)
Q Consensus 136 ~~Gl~G~liV~ 146 (541)
..||.|.|+|+
T Consensus 88 ~~gM~G~i~V~ 98 (98)
T 2plt_A 88 GAGMVGKIIVQ 98 (98)
T ss_dssp GGTCEEEEEEC
T ss_pred ccCCeEEEEEC
Confidence 67999999984
No 84
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.74 E-value=2.2e-08 Score=86.69 Aligned_cols=78 Identities=14% Similarity=0.225 Sum_probs=56.9
Q ss_pred CCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCC-CCccCCCCeEEEEEEecCCceeeEEcCCc
Q 009171 53 NGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGT-NCPIPPNSNWTYKFQMKDQIGTFNYFPST 131 (541)
Q Consensus 53 Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~ 131 (541)
+-.|--+.|++++||+|++ .|....++++++... .+|.... ...+.||++++|.| +++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 3445457999999999765 588777777776432 1222222 34589999999988 369999999987
Q ss_pred hhhhhcceeeEEEEe
Q 009171 132 KVHRAFGGFGAVNVA 146 (541)
Q Consensus 132 ~~q~~~Gl~G~liV~ 146 (541)
|. ||.|.|+|+
T Consensus 122 H~----gM~G~I~V~ 132 (132)
T 3c75_A 122 HP----FMRGKVIVE 132 (132)
T ss_dssp CT----TCEEEEEEC
T ss_pred Cc----CCEEEEEEC
Confidence 54 999999985
No 85
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.73 E-value=2.2e-08 Score=81.95 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=57.5
Q ss_pred CceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCchhhhhc
Q 009171 58 GPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAF 137 (541)
Q Consensus 58 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (541)
-+.|++++||+|++ .|.....++++.++...++ ...++.......+.||+++++.| +++|+|+|||+ .|...
T Consensus 18 P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg-~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVPA-DTAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGA 89 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECCSSSCH-HHHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCCCc-cccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccccc
Confidence 46899999998764 5877778999988753210 00000000023589999999988 36999999999 56678
Q ss_pred ceeeEEEEe
Q 009171 138 GGFGAVNVA 146 (541)
Q Consensus 138 Gl~G~liV~ 146 (541)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999985
No 86
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.71 E-value=3.2e-08 Score=79.68 Aligned_cols=75 Identities=21% Similarity=0.381 Sum_probs=55.9
Q ss_pred cCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCchhhhh
Q 009171 57 PGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRA 136 (541)
Q Consensus 57 pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~ 136 (541)
--+.|++++||+|++ .|.....++++.++.. +.. . ....+.||+++++.| +++|+|||||+. +..
T Consensus 17 ~P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~-~---~~~~~~~g~~~~~~f---~~~G~y~~~C~~--H~~ 81 (91)
T 1bxv_A 17 EPSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS-H---KDLAFSPGETFEATF---SEPGTYTYYCEP--HRG 81 (91)
T ss_dssp ESSEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC-E---EEEECSTTCEEEEEC---CSCEEEEEECTT--TGG
T ss_pred eCCEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC-c---ccceeCCCCEEEEEe---CCCEEEEEEeCC--Ccc
Confidence 346899999999764 5876678899888721 110 0 024588999998887 469999999994 455
Q ss_pred cceeeEEEEe
Q 009171 137 FGGFGAVNVA 146 (541)
Q Consensus 137 ~Gl~G~liV~ 146 (541)
.||.|.|+|+
T Consensus 82 ~gM~g~i~V~ 91 (91)
T 1bxv_A 82 AGMVGKIVVQ 91 (91)
T ss_dssp GTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 6999999984
No 87
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.65 E-value=3.9e-08 Score=86.16 Aligned_cols=99 Identities=11% Similarity=0.063 Sum_probs=70.5
Q ss_pred EEecCCCcEEEEEEEc--CCCCCCceeecCC--ceEEEEecccccCccccccCc---CCCCCccceEEeCCCCEEEEEEE
Q 009171 415 VIPTTLHDYVEIVFQN--NETSVQSWHLDGS--SFYVVGYGSGTWTADIRKRYN---LNDAITRHTVQVYPQSWSAIYVS 487 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N--~~~~~HP~HlHG~--~F~Vl~~g~g~~~~~~~~~~~---~~~p~~rDTv~vpp~g~~~irf~ 487 (541)
.+.++.|++|+|++.| .+...|.||++.. .+.-+.. .+..... ...+- -....+++|..|.||+...+.|.
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVN-TAAQNNA-DALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHH-HHHHTCG-GGTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhh-hhhhhcc-cccccCccccccccccceeeCCCceeEEEEE
Confidence 4678999999999999 6678999999843 1210000 0000000 00000 00124678999999999999999
Q ss_pred cCCcceeEEeechhhHhhcccEEEEEEe
Q 009171 488 LDNKGVWNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 488 ~dnpG~w~~HCHil~H~d~GMm~~~~V~ 515 (541)
++.||.|.|||++..|...||...+.|.
T Consensus 112 ~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 112 TPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred eCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999885
No 88
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.64 E-value=5.4e-08 Score=79.55 Aligned_cols=80 Identities=16% Similarity=0.123 Sum_probs=60.4
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|++|+| .|.+...|.||+|+..+- ..++. ...++|+..+.||+...++| +.||.|
T Consensus 19 ~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~p------~~~~~---------~~~~~~~~~~~pG~~~~~tf--~~~G~y 79 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNAGFPHNIVFDEDAIP------SGVNA---------DAISRDDYLNAPGETYSVKL--TAAGEY 79 (98)
T ss_dssp EEEECTTCEEEE--EECSSCCEEEEECGGGSC------TTCCH---------HHHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceEEEEeCCCCC------Ccccc---------ccccccceecCCCCEEEEEe--CCCeEE
Confidence 578899999887 688778999999974220 00110 00246889999999887754 689999
Q ss_pred EEeechhhHhhcccEEEEEEe
Q 009171 495 NLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 495 ~~HCHil~H~d~GMm~~~~V~ 515 (541)
.|||| .|.+.||...+.|.
T Consensus 80 ~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 80 GYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp EEECG--GGGGGTCEEEEEEC
T ss_pred EEEcC--CccccCCeEEEEEC
Confidence 99999 59999999999873
No 89
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.63 E-value=7.1e-08 Score=78.72 Aligned_cols=76 Identities=20% Similarity=0.403 Sum_probs=55.9
Q ss_pred ceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCC---CCCccCCCCeEEEEEEecCCceeeEEcCCchhhh
Q 009171 59 PAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLG---TNCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHR 135 (541)
Q Consensus 59 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~---~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~ 135 (541)
+.|++++||+| ++.|.....++++.++.... +|..+ ....+.||+++++.| +++|+|+|||+ .|.
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--STT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Chh
Confidence 58999999985 55687666778887765321 11100 023588999999888 46999999999 556
Q ss_pred hcceeeEEEEe
Q 009171 136 AFGGFGAVNVA 146 (541)
Q Consensus 136 ~~Gl~G~liV~ 146 (541)
..||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 67999999984
No 90
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.63 E-value=7.6e-08 Score=79.33 Aligned_cols=77 Identities=10% Similarity=0.123 Sum_probs=55.6
Q ss_pred CceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCC-------CCCCC---CCccCCCCeEEEEEEecCCceeeEE
Q 009171 58 GPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQD-------GVLGT---NCPIPPNSNWTYKFQMKDQIGTFNY 127 (541)
Q Consensus 58 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~D-------G~~~~---q~~i~pG~~~~y~f~~~~~~Gt~wY 127 (541)
-+.|+|++||+|+ +.|.....++++.+.- ...+ ..++. ...+.||+++++.| +++|+|+|
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y 85 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIP-----AGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTF 85 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCC-----TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEE
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCc-----ccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEE
Confidence 4689999999976 5688766777777631 0011 00111 23589999999988 46999999
Q ss_pred cCCchhhhhcceeeEEEEe
Q 009171 128 FPSTKVHRAFGGFGAVNVA 146 (541)
Q Consensus 128 H~H~~~q~~~Gl~G~liV~ 146 (541)
||+ .+...||.|.|+|+
T Consensus 86 ~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 86 YCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp ECS--TTGGGTCEEEEEEC
T ss_pred EeC--CCcccCCeEEEEEC
Confidence 999 66778999999985
No 91
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.63 E-value=3.2e-08 Score=80.94 Aligned_cols=78 Identities=14% Similarity=0.068 Sum_probs=59.6
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCc-cceEEeCCCCEEEEEEEcCCcce
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAIT-RHTVQVYPQSWSAIYVSLDNKGV 493 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~-rDTv~vpp~g~~~irf~~dnpG~ 493 (541)
.+.++.|++|.|+ |.+...|.||+|+..+- +. . .+.+ .|+..+.||+...+.| +.||.
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p----g~------~-------~~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLSPHNIVFDADGVP----AD------T-------AAKLSHKGLLFAAGESFTSTF--TEPGT 78 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECCSSSC----HH------H-------HHHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCCCC----cc------c-------cccccccccccCCCCEEEEEc--CCCeE
Confidence 4788999998885 77778999999874321 00 0 0012 5788999999887755 88999
Q ss_pred eEEeechhhHhhcccEEEEEEe
Q 009171 494 WNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 494 w~~HCHil~H~d~GMm~~~~V~ 515 (541)
|.|||| .|...||...+.|.
T Consensus 79 y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 79 YTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEcC--CccccCCeEEEEEC
Confidence 999999 59999999999873
No 92
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.62 E-value=8.7e-08 Score=81.51 Aligned_cols=75 Identities=19% Similarity=0.162 Sum_probs=53.2
Q ss_pred ceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCchhhhhcc
Q 009171 59 PAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFG 138 (541)
Q Consensus 59 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 138 (541)
..|+|++||+|++.++|. ++++..+.- ..-+|.- ...+.||++++|.|+ .+|+|||+|- .|...|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~~--~f~~~pg~t~s~TF~---~pG~y~y~C~--~H~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGVE--SFKSKINESYTLTVT---EPGLYGVKCT--PHFGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEECG--GGTTTT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeC--CCCcCC
Confidence 589999999988777762 333333321 1113321 234679999998883 6999999998 566789
Q ss_pred eeeEEEEecC
Q 009171 139 GFGAVNVAQR 148 (541)
Q Consensus 139 l~G~liV~~~ 148 (541)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999873
No 93
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.59 E-value=1.8e-07 Score=76.56 Aligned_cols=76 Identities=17% Similarity=0.315 Sum_probs=57.0
Q ss_pred ceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCC----C--C-CCccCCCCeEEEEEEecCCceeeEEcCCc
Q 009171 59 PAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVL----G--T-NCPIPPNSNWTYKFQMKDQIGTFNYFPST 131 (541)
Q Consensus 59 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~----~--~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~ 131 (541)
+.|++++||+| +++|.....++++.++.... +|.. . . ...+.||+++++.|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~- 85 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA- 85 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG-
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC-
Confidence 58999999985 55888777888888874321 2221 0 1 135789999998884 6999999999
Q ss_pred hhhhhcceeeEEEEe
Q 009171 132 KVHRAFGGFGAVNVA 146 (541)
Q Consensus 132 ~~q~~~Gl~G~liV~ 146 (541)
.+...||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 -PHAGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CccccCCEEEEEEC
Confidence 56677999999984
No 94
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.58 E-value=1.9e-07 Score=76.43 Aligned_cols=77 Identities=17% Similarity=0.282 Sum_probs=56.6
Q ss_pred CceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCC----C--C-CCccCCCCeEEEEEEecCCceeeEEcCC
Q 009171 58 GPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVL----G--T-NCPIPPNSNWTYKFQMKDQIGTFNYFPS 130 (541)
Q Consensus 58 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~----~--~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H 130 (541)
-+.|++++||+|+ ++|.....++++.++.... +|.- + . ...+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC
Confidence 3689999999865 5888777788887764221 2210 0 0 134789999998884 6999999999
Q ss_pred chhhhhcceeeEEEEe
Q 009171 131 TKVHRAFGGFGAVNVA 146 (541)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (541)
.|...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 56678999999984
No 95
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.58 E-value=8.2e-08 Score=82.10 Aligned_cols=77 Identities=18% Similarity=0.160 Sum_probs=53.3
Q ss_pred CceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCchhhhhc
Q 009171 58 GPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAF 137 (541)
Q Consensus 58 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (541)
-+.|+|++||+|++.++|. ++++..+.-. .-+|.- ...+.||++++|.|+ .+|+|||||.. |...
T Consensus 22 P~~i~V~~GDtVtf~n~~~---~H~v~~~~~~-----~P~g~~--~f~s~pGet~s~TF~---~pG~y~y~C~~--H~~~ 86 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK---GHNSALMKGG-----APEGAE--TWKGKINEEITVTLS---KPGVYMYQCAP--HVGM 86 (127)
T ss_dssp SSEEEECTTCEEEEECSSS---SCCCEECTTC-----SCTTCC--CCBCCTTCCCEEECC---SCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEccCc-----CCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeCC--CCcC
Confidence 3699999999977666653 3333333210 112221 234679999988883 69999999985 5678
Q ss_pred ceeeEEEEecCC
Q 009171 138 GGFGAVNVAQRS 149 (541)
Q Consensus 138 Gl~G~liV~~~~ 149 (541)
||.|.|+|.++.
T Consensus 87 GM~G~I~V~~~~ 98 (127)
T 3tu6_A 87 GMIGAIVVGEPA 98 (127)
T ss_dssp TCEEEEEESSCT
T ss_pred CcEEEEEECcCC
Confidence 999999999753
No 96
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.55 E-value=1.6e-07 Score=75.54 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=57.1
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|+.|.|+ |.+...|.+|+|+. .. ...++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~~~~H~v~~~~~---------~~--------------~~~~~~~~~~g~~~~~~f--~~~G~y 72 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNKLAPHNVVVEGQ---------PE--------------LSHKDLAFSPGETFEATF--SEPGTY 72 (91)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEETTC---------GG--------------GCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCC---------Cc--------------cCcccceeCCCCEEEEEe--CCCEEE
Confidence 4678999998874 77778999999872 00 124778899999777755 889999
Q ss_pred EEeechhhHhhcccEEEEEEe
Q 009171 495 NLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 495 ~~HCHil~H~d~GMm~~~~V~ 515 (541)
.|||| .|...||...+.|.
T Consensus 73 ~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 73 TYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEECT--TTGGGTCEEEEEEC
T ss_pred EEEeC--CCccCCCEEEEEEC
Confidence 99999 59999999999873
No 97
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.52 E-value=3.8e-07 Score=77.47 Aligned_cols=75 Identities=11% Similarity=0.010 Sum_probs=53.1
Q ss_pred ceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCchhhhhcc
Q 009171 59 PAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFG 138 (541)
Q Consensus 59 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 138 (541)
+.|+|++||+|++. |.. .++++..+.... -+|.. ...+.||++++|.|+ .+|+|+|||- .|...|
T Consensus 22 ~~i~V~~GDTV~f~--n~~-~~Hnv~~~~~~~-----p~g~~--~~~~~pg~t~s~TF~---~~G~y~Y~C~--~H~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKFV--PTD-KSHNAESVREVW-----PEGVA--PVKGGFSKEVVFNAE---KEGLYVLKCA--PHYGMG 86 (124)
T ss_dssp SEEEECTTCEEEEE--CSS-SSCCCEECTTTS-----CTTSC--CCBCCTTCCEEEECC---SSEEEEEECT--TTGGGT
T ss_pred CEEEECCCCEEEEE--ECC-CCccEEEeCCcC-----CCCcc--ccccCCCCEEEEEeC---CCeEEEEEcC--CCCcCC
Confidence 68999999996554 543 455555553211 12221 234679999999884 6999999997 566779
Q ss_pred eeeEEEEecC
Q 009171 139 GFGAVNVAQR 148 (541)
Q Consensus 139 l~G~liV~~~ 148 (541)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999874
No 98
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.47 E-value=9.5e-08 Score=77.93 Aligned_cols=78 Identities=17% Similarity=0.215 Sum_probs=58.1
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|++|.|+ |.+...|.+++++..+. .+ .. ...+++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~-----~~-~~-----------~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG-----ES-AP-----------ALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT-----SC-HH-----------HHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc-----cc-cc-----------cccccceecCCCCEEEEEe--CCCeEE
Confidence 4678999998775 77778999999865540 00 00 0014677788998877755 899999
Q ss_pred EEeechhhHhhcccEEEEEEe
Q 009171 495 NLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 495 ~~HCHil~H~d~GMm~~~~V~ 515 (541)
.|||+ .|.++||...+.|.
T Consensus 79 ~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp EEECS--STTTTTCEEEEEEC
T ss_pred EEEcc--ChhhcCCEEEEEEC
Confidence 99999 69999999999873
No 99
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.42 E-value=6.6e-07 Score=75.01 Aligned_cols=74 Identities=14% Similarity=0.172 Sum_probs=58.4
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|+.|+|.+.|.+...|-|++... .-+..+.||+...+.|.+++||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------------------------GVQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEECCCCEEE
Confidence 46789999999999999866565554421 125678999999999999999999
Q ss_pred EEeechhhHhhcccEEEEEEec
Q 009171 495 NLRSAIWERRYLGQELYLRVSN 516 (541)
Q Consensus 495 ~~HCHil~H~d~GMm~~~~V~~ 516 (541)
.||||...|... |...+.|.+
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEEC
T ss_pred EEECCCCCchHH-CEEEEEEeC
Confidence 999999766443 888888753
No 100
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.38 E-value=6.1e-07 Score=73.36 Aligned_cols=83 Identities=13% Similarity=0.101 Sum_probs=60.1
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcce
Q 009171 414 SVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGV 493 (541)
Q Consensus 414 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~ 493 (541)
..+.++.|++|.| .|.+...|.+|+++..|- . + ++... . ...+|++.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p---~--g-~~~~~---~----~~~~~~~~~~~G~~~~~~f--~~~G~ 79 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP---A--G-VDVTK---I----SMPEEDLLNAPGEEYSVTL--TEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC---T--T-CCHHH---H----SCCTTCCBCSTTCEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc---c--c-ccccc---c----cccccceeeCCCCEEEEEe--CCCcE
Confidence 3578899999877 688778999999975441 0 0 11000 0 0125667889999887765 69999
Q ss_pred eEEeechhhHhhcccEEEEEEe
Q 009171 494 WNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 494 w~~HCHil~H~d~GMm~~~~V~ 515 (541)
|.|||+ .|.+.||...+.|.
T Consensus 80 y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 80 YKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEcC--CccccCCEEEEEEC
Confidence 999999 59999999999873
No 101
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.35 E-value=1.5e-06 Score=71.20 Aligned_cols=72 Identities=18% Similarity=0.221 Sum_probs=59.4
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|+.|+|++.|.+...|.|.+.+..+ ...+.||....+.|+++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLGI---------------------------DVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCCc---------------------------ceeecCCcceeEEEecccCceE
Confidence 3678999999999999988788877653322 2346788999999999999999
Q ss_pred EEeechhhHhhcccEEEEEEe
Q 009171 495 NLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 495 ~~HCHil~H~d~GMm~~~~V~ 515 (541)
.|+|.. |...||...+.|+
T Consensus 82 ~y~C~~--H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIVK 100 (100)
T ss_dssp EEECTT--TGGGTCEEEEEEC
T ss_pred EEECcc--ccCCCCEEEEEEC
Confidence 999985 9999999988873
No 102
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.33 E-value=7.2e-07 Score=72.81 Aligned_cols=77 Identities=16% Similarity=0.188 Sum_probs=54.8
Q ss_pred CceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCC--C---CCccCCCCeEEEEEEecCCceeeEEcCCch
Q 009171 58 GPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLG--T---NCPIPPNSNWTYKFQMKDQIGTFNYFPSTK 132 (541)
Q Consensus 58 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~--~---q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~ 132 (541)
-+.|+|++||+|+ +.|.....+++....-.. -+|.-. + ...+.||+++++.| +++|+|+|+|-.
T Consensus 17 P~~i~v~~GdtV~--~~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~- 85 (98)
T 1iuz_A 17 PSKISVAAGEAIE--FVNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEP- 85 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTT-
T ss_pred CCEEEECCCCEEE--EEECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchh-
Confidence 4689999999965 468866777777664211 122210 0 12478999999888 369999999986
Q ss_pred hhhhcceeeEEEEe
Q 009171 133 VHRAFGGFGAVNVA 146 (541)
Q Consensus 133 ~q~~~Gl~G~liV~ 146 (541)
|...||.|.|+|+
T Consensus 86 -H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 -HAGAGMKMTITVQ 98 (98)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -hccCCCEEEEEEC
Confidence 5556999999985
No 103
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.33 E-value=1.4e-06 Score=74.08 Aligned_cols=76 Identities=17% Similarity=0.143 Sum_probs=50.6
Q ss_pred CceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCchhhhhc
Q 009171 58 GPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAF 137 (541)
Q Consensus 58 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (541)
-+.|+|++||+|++ .|... ++++..+- ...-+|.. .....||+++++.|. .+|+|+|+|.. |...
T Consensus 20 P~~i~V~~GdtV~f--~~~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF~---~~G~y~y~C~~--H~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVTF--IPVDK-GHNVESIK-----DMIPEGAE--KFKSKINENYVLTVT---QPGAYLVKCTP--HYAM 84 (123)
T ss_dssp SSEEEECTTCEEEE--EESSS-SCCCEECT-----TCSCTTCC--CCBCCTTCCEEEECC---SCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEEE--EECCC-CeEEEEec-----ccCCCCcc--ceecCCCCEEEEEeC---CCEEEEEEeCC--cccC
Confidence 36899999999755 55432 44443321 01112221 123568999888883 69999999974 5668
Q ss_pred ceeeEEEEecC
Q 009171 138 GGFGAVNVAQR 148 (541)
Q Consensus 138 Gl~G~liV~~~ 148 (541)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999874
No 104
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.30 E-value=1.4e-06 Score=74.75 Aligned_cols=92 Identities=15% Similarity=0.157 Sum_probs=60.8
Q ss_pred CCcCceEEEecC-CEEEEEEEECCCCC-----e--eEeeCCcCC-------CCCCCCC----CCCC-C--CCccCCCCeE
Q 009171 55 QFPGPAIEAVTN-DNIIVNLINKLDEP-----F--LITWNGVKQ-------RRTTWQD----GVLG-T--NCPIPPNSNW 112 (541)
Q Consensus 55 ~~pGP~i~v~~G-d~v~v~~~N~l~~~-----~--~iH~HG~~~-------~~~~~~D----G~~~-~--q~~i~pG~~~ 112 (541)
+|--..|.|++| |+|+|+|+|....+ + .|--+|... .....++ +.+. + ..-|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343458999999 99999999986432 3 222222100 0000011 1111 1 2358999999
Q ss_pred EEEEEec--CCceeeEEcCCchhhhhcceeeEEEEec
Q 009171 113 TYKFQMK--DQIGTFNYFPSTKVHRAFGGFGAVNVAQ 147 (541)
Q Consensus 113 ~y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (541)
++.|+++ .++|+|||.|-...|.. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999964 37999999998877777 8999999964
No 105
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.28 E-value=1.6e-06 Score=73.81 Aligned_cols=76 Identities=14% Similarity=0.134 Sum_probs=51.0
Q ss_pred CceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCchhhhhc
Q 009171 58 GPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAF 137 (541)
Q Consensus 58 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (541)
-+.|+|++||+|+ |.|... ++++..+. ...-||.. ...+.||+++++.|. .+|+|+|+|.. |...
T Consensus 20 P~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF~---~~G~y~y~C~~--H~~~ 84 (123)
T 1pmy_A 20 PALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGAD--YVKTTVGQEAVVKFD---KEGVYGFKCAP--HYMM 84 (123)
T ss_dssp SSEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTCC--CCBCCTTSCEEEECC---SCEEEEEECST--TTTT
T ss_pred CCEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeCC--cccc
Confidence 3689999999965 455532 44433331 11112221 134679999888883 59999999984 5568
Q ss_pred ceeeEEEEecC
Q 009171 138 GGFGAVNVAQR 148 (541)
Q Consensus 138 Gl~G~liV~~~ 148 (541)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1pmy_A 85 GMVALVVVGDK 95 (123)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEcCC
Confidence 99999999874
No 106
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.27 E-value=4.6e-06 Score=69.07 Aligned_cols=76 Identities=14% Similarity=0.242 Sum_probs=53.1
Q ss_pred CCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCC-CCccCCCCeEEEEEEecCCceeeEEcCCchh
Q 009171 55 QFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGT-NCPIPPNSNWTYKFQMKDQIGTFNYFPSTKV 133 (541)
Q Consensus 55 ~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~ 133 (541)
.|--+.|+|++||+|++ .|.....+++...... .|.... ...+.||+++++.| +++|+|+|+|-.|.
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~ 97 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 97 (106)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC
Confidence 34346999999999754 5886655555554321 111111 23588999999888 36999999998754
Q ss_pred hhhcceeeEEEEe
Q 009171 134 HRAFGGFGAVNVA 146 (541)
Q Consensus 134 q~~~Gl~G~liV~ 146 (541)
||.|.|+|+
T Consensus 98 ----~M~G~I~V~ 106 (106)
T 1id2_A 98 ----FMRGKVIVE 106 (106)
T ss_dssp ----TCEEEEEEC
T ss_pred ----CCEEEEEEC
Confidence 999999984
No 107
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.24 E-value=1.5e-06 Score=71.37 Aligned_cols=85 Identities=13% Similarity=0.079 Sum_probs=58.6
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCc-cceEEeCCCCEEEEEEEcCCcc
Q 009171 414 SVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAIT-RHTVQVYPQSWSAIYVSLDNKG 492 (541)
Q Consensus 414 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~-rDTv~vpp~g~~~irf~~dnpG 492 (541)
..+.++.|++|+|+ |.+...|.++++.-... .+.+.... ..+.+ .+++.+.||+...+.| +.||
T Consensus 17 ~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~~~~pG~~~~~tf--~~~G 81 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASEL------KAASMDENDLLSEDEPSFKAKV--STPG 81 (102)
T ss_dssp SEEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHHH------HHTSCCTTCCBBTTBCEEEECC--CSCE
T ss_pred CEEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccchh------hcccccccceecCCCCEEEEEe--CCCe
Confidence 35788999998874 77778999998821100 00000000 00223 4677889999877755 8899
Q ss_pred eeEEeechhhHhhcccEEEEEEe
Q 009171 493 VWNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 493 ~w~~HCHil~H~d~GMm~~~~V~ 515 (541)
.|.|||+ .|...||...+.|.
T Consensus 82 ~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 82 TYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EEEEECS--TTGGGTCEEEEEEC
T ss_pred EEEEEeC--CCcccCCeEEEEEC
Confidence 9999999 69999999999873
No 108
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.16 E-value=1.8e-06 Score=77.02 Aligned_cols=92 Identities=14% Similarity=0.068 Sum_probs=60.6
Q ss_pred CCcCceEEE-ecCCEEEEEEEECCCCC-----ee--EeeCCcC---------CCC---CCCCCCCCCC-CCccCCCCeEE
Q 009171 55 QFPGPAIEA-VTNDNIIVNLINKLDEP-----FL--ITWNGVK---------QRR---TTWQDGVLGT-NCPIPPNSNWT 113 (541)
Q Consensus 55 ~~pGP~i~v-~~Gd~v~v~~~N~l~~~-----~~--iH~HG~~---------~~~---~~~~DG~~~~-q~~i~pG~~~~ 113 (541)
+|--..|.| ++||+|+|+|+|....+ ++ |--+|.. ... -+..|..-.. ..-|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 454458999 99999999999997542 32 2222210 000 0001110000 23589999999
Q ss_pred EEEEec-CCceeeEEcCCchhhhhcceeeEEEEec
Q 009171 114 YKFQMK-DQIGTFNYFPSTKVHRAFGGFGAVNVAQ 147 (541)
Q Consensus 114 y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (541)
+.|+++ -++|+|||+|-...|.. ||.|-|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 999863 16999999998877777 8999999974
No 109
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.10 E-value=5.4e-06 Score=86.70 Aligned_cols=89 Identities=18% Similarity=0.146 Sum_probs=63.6
Q ss_pred eeEEEECCCCcCceEEEecCCEEEEEEEECC---CCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCce
Q 009171 47 QQGILINGQFPGPAIEAVTNDNIIVNLINKL---DEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIG 123 (541)
Q Consensus 47 ~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l---~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~G 123 (541)
..+...+-.|--+.|+|++||+|++.++|.. +..+++...++ ++...+.||++.++.|++ +++|
T Consensus 546 V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl------------GIK~DaiPGrtnsvtFta-dkPG 612 (638)
T 3sbq_A 546 VYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH------------GVSMEISPQQTSSITFVA-DKPG 612 (638)
T ss_dssp EEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT------------TEEEEECTTCEEEEEEEC-CSCE
T ss_pred EEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC------------CceeeeCCCCeEEEEEEc-CCCE
Confidence 3444555566667999999999999999964 23333322221 112358899999999995 7899
Q ss_pred eeEEcCCchhh-hhcceeeEEEEecC
Q 009171 124 TFNYFPSTKVH-RAFGGFGAVNVAQR 148 (541)
Q Consensus 124 t~wYH~H~~~q-~~~Gl~G~liV~~~ 148 (541)
+|||+|..... .-.+|.|.|+|+++
T Consensus 613 vY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 613 LHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEEECCCcCCCCcccceEEEEEecC
Confidence 99999986422 22479999999863
No 110
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.06 E-value=7.4e-06 Score=69.55 Aligned_cols=73 Identities=15% Similarity=0.149 Sum_probs=49.6
Q ss_pred ceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCchhhhhcc
Q 009171 59 PAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTKVHRAFG 138 (541)
Q Consensus 59 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 138 (541)
+.|+|++||+|++ .|... .++++...- ..-+|.. ...+.||+++++.|+ ++|+|+|+|-.|..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~~-----~~p~~~~--~~~~~~g~t~~~tF~---~~G~y~y~C~~H~~---- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIKG-----MIPDGAE--AFKSKINENYKVTFT---APGVYGVKCTPHPF---- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECTT-----CSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEEETTEEE----
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEccc-----ccCCCcc--eeecCCCCEEEEEeC---CCEEEEEEeCCCcc----
Confidence 6899999998655 56543 444444321 1112211 234679999998883 69999999987543
Q ss_pred eeeEEEEecC
Q 009171 139 GFGAVNVAQR 148 (541)
Q Consensus 139 l~G~liV~~~ 148 (541)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999874
No 111
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.03 E-value=7.2e-06 Score=66.89 Aligned_cols=83 Identities=14% Similarity=0.110 Sum_probs=58.5
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcce
Q 009171 414 SVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGV 493 (541)
Q Consensus 414 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~ 493 (541)
..+.++.|++|+| .|.+...|.++++...+- .+ .+... . ...++.+.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p---~~---~~~~~---~----~~~~~~~~~~~G~~~~~tf--~~~G~ 79 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP---SG---VDASK---I----SMSEEDLLNAKGETFEVAL--SNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC---TT---CCHHH---H----CCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc---cc---ccccc---c----ccccCccccCCCCEEEEEE--CCCce
Confidence 3578899998877 788778999999864330 00 00000 0 0124556788998777654 69999
Q ss_pred eEEeechhhHhhcccEEEEEEe
Q 009171 494 WNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 494 w~~HCHil~H~d~GMm~~~~V~ 515 (541)
|.|||+ .|..+||...+.|.
T Consensus 80 y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 80 YSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEcC--CCcccCCEEEEEEC
Confidence 999999 59999999999873
No 112
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.02 E-value=6.1e-06 Score=70.68 Aligned_cols=92 Identities=18% Similarity=0.119 Sum_probs=58.8
Q ss_pred CCcCceEEE-ecCCEEEEEEEECCCCC-----eeEe--eCCcCC-------CCCCCCC----CCCC-C--CCccCCCCeE
Q 009171 55 QFPGPAIEA-VTNDNIIVNLINKLDEP-----FLIT--WNGVKQ-------RRTTWQD----GVLG-T--NCPIPPNSNW 112 (541)
Q Consensus 55 ~~pGP~i~v-~~Gd~v~v~~~N~l~~~-----~~iH--~HG~~~-------~~~~~~D----G~~~-~--q~~i~pG~~~ 112 (541)
+|--..|.| ++||+|+|+|+|....+ +++- -+|... .....+| +-+. + ..-|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 343458999 99999999999997542 3322 222000 0000011 1111 1 2358999999
Q ss_pred EEEEEec-CCcee-eEEcCCchhhhhcceeeEEEEec
Q 009171 113 TYKFQMK-DQIGT-FNYFPSTKVHRAFGGFGAVNVAQ 147 (541)
Q Consensus 113 ~y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 147 (541)
+..|+++ -.+|+ |||.|-...|.. ||.|.|+|.+
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 9999964 04655 999998777777 8999999963
No 113
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.90 E-value=1.1e-05 Score=68.87 Aligned_cols=91 Identities=18% Similarity=0.154 Sum_probs=59.6
Q ss_pred CCcCceEEE-ecCCEEEEEEEECCCCC-----eeEeeC--C---------cCC----CCCCCCCCCCCC--CCccCCCCe
Q 009171 55 QFPGPAIEA-VTNDNIIVNLINKLDEP-----FLITWN--G---------VKQ----RRTTWQDGVLGT--NCPIPPNSN 111 (541)
Q Consensus 55 ~~pGP~i~v-~~Gd~v~v~~~N~l~~~-----~~iH~H--G---------~~~----~~~~~~DG~~~~--q~~i~pG~~ 111 (541)
+|--..|.| +.|++|+|+|+|....+ +++-+= + +.. .--+..|.. .+ ...|.||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~-~~~~t~~l~pGes 91 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDER-VIAHTSVIGGGET 91 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTT-EEEECCCBCTTCE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccch-hhccceeeCCCCE
Confidence 444458999 99999999999997543 433221 1 000 000011110 01 235799999
Q ss_pred EEEEEEec-CCcee-eEEcCCchhhhhcceeeEEEEec
Q 009171 112 WTYKFQMK-DQIGT-FNYFPSTKVHRAFGGFGAVNVAQ 147 (541)
Q Consensus 112 ~~y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 147 (541)
+++.|+++ -++|+ |+|.|-...|.. ||.|.|+|.+
T Consensus 92 ~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 92 DSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 99999963 15885 999998877777 8999999963
No 114
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.89 E-value=1.9e-05 Score=69.85 Aligned_cols=83 Identities=11% Similarity=0.067 Sum_probs=60.4
Q ss_pred eEEecCCCcEEEEEEEcCC-CCCCceeecCCceEEEEecccccCccccccCcCCCCCccce-------EEeCCCC--EEE
Q 009171 414 SVIPTTLHDYVEIVFQNNE-TSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHT-------VQVYPQS--WSA 483 (541)
Q Consensus 414 ~~~~~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDT-------v~vpp~g--~~~ 483 (541)
+.+.++.|+.|.+++.|.+ ...|-|-++.. + ..+.. .|...+. ..|.||+ ...
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~-------~-~~~~~---------~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKK-------G-PPYAV---------MPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESC-------C-SCCCS---------SCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeec-------C-cchhc---------cccccccccccccccccCCCCceEEE
Confidence 3588999999999999974 55666665521 1 01110 0111122 2567899 999
Q ss_pred EEEEcCCcceeEEeechhhHhhcccEEEEEE
Q 009171 484 IYVSLDNKGVWNLRSAIWERRYLGQELYLRV 514 (541)
Q Consensus 484 irf~~dnpG~w~~HCHil~H~d~GMm~~~~V 514 (541)
+.|++ .||.|.||||+--|...||-..+.|
T Consensus 124 ~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 124 FTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 99999 9999999999999999999999877
No 115
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.89 E-value=4.6e-05 Score=65.04 Aligned_cols=91 Identities=15% Similarity=0.127 Sum_probs=59.1
Q ss_pred CCcCceEEE-ecCCEEEEEEEECCCCC-----eeEee--CCcC-------CCCCCCCC----CCCC-C--CCccCCCCeE
Q 009171 55 QFPGPAIEA-VTNDNIIVNLINKLDEP-----FLITW--NGVK-------QRRTTWQD----GVLG-T--NCPIPPNSNW 112 (541)
Q Consensus 55 ~~pGP~i~v-~~Gd~v~v~~~N~l~~~-----~~iH~--HG~~-------~~~~~~~D----G~~~-~--q~~i~pG~~~ 112 (541)
+|--..|.| ++||+|+|+|+|....+ +++-. .|.. ......++ +-+. + ...|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 344458999 99999999999986543 33322 2210 00001111 0111 1 2248999999
Q ss_pred EEEEEecC-Ccee-eEEcCCchhhhhcceeeEEEEe
Q 009171 113 TYKFQMKD-QIGT-FNYFPSTKVHRAFGGFGAVNVA 146 (541)
Q Consensus 113 ~y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 146 (541)
+..|+.+. .+|+ |||.|-...|.. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999631 4776 999998877777 899999984
No 116
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.88 E-value=2.3e-05 Score=64.69 Aligned_cols=71 Identities=13% Similarity=0.067 Sum_probs=50.2
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|+.|+| .|.+...|.+|+|... .|. ..+ ++-.+.||+...+.| +.||.|
T Consensus 34 ~i~v~~Gd~V~~--~N~d~~~H~v~~~~~~-------~g~-------------~~~-~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTW--INREAMPHNVHFVAGV-------LGE-------------AAL-KGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECTTT-------SSS-------------SCE-ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCCEEEEEcCCC-------CCc-------------ccc-cccccCCCCEEEEEe--CCCEEE
Confidence 467899999888 4887789999998522 010 001 122367888665554 899999
Q ss_pred EEeechhhHhhcccEEEEEE
Q 009171 495 NLRSAIWERRYLGQELYLRV 514 (541)
Q Consensus 495 ~~HCHil~H~d~GMm~~~~V 514 (541)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 54 99888877
No 117
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.79 E-value=5.2e-05 Score=80.98 Aligned_cols=74 Identities=14% Similarity=0.122 Sum_probs=60.3
Q ss_pred EEecCCCcEEEEEEEcCC---CCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCc
Q 009171 415 VIPTTLHDYVEIVFQNNE---TSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNK 491 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~---~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnp 491 (541)
.+.++.|+.|+|.+.|.. +..|.|+++++.+. ..+.||+...++|+++.|
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~p 566 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAANP 566 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCSC
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCCC
Confidence 577899999999999964 34799998864321 457889999999999999
Q ss_pred ceeEEeech---hhHhhcccEEEEEEecC
Q 009171 492 GVWNLRSAI---WERRYLGQELYLRVSND 517 (541)
Q Consensus 492 G~w~~HCHi---l~H~d~GMm~~~~V~~~ 517 (541)
|.|.||||. ..| .||...+.|.++
T Consensus 567 GtY~yhC~e~Cg~~H--~gM~G~IiV~p~ 593 (595)
T 1fwx_A 567 GVYWYYCQWFCHALH--MEMRGRMLVEPK 593 (595)
T ss_dssp EEEEEECCSCCSTTC--TTCEEEEEEECC
T ss_pred EEEEEECCCCCCCCc--cCCEEEEEEEcC
Confidence 999999993 345 499999998764
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.23 E-value=0.0013 Score=55.17 Aligned_cols=85 Identities=16% Similarity=0.152 Sum_probs=54.4
Q ss_pred CcCceEEEec-CCEEEEEEEECCCCC-----eeEee--------C---CcCCCCCCCCCCC----CCC---CCccCCCCe
Q 009171 56 FPGPAIEAVT-NDNIIVNLINKLDEP-----FLITW--------N---GVKQRRTTWQDGV----LGT---NCPIPPNSN 111 (541)
Q Consensus 56 ~pGP~i~v~~-Gd~v~v~~~N~l~~~-----~~iH~--------H---G~~~~~~~~~DG~----~~~---q~~i~pG~~ 111 (541)
|--..|.|++ |++|+|+|+|....+ +++=. | |+... +.+|=+ +.+ ..-|.||++
T Consensus 15 F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~--~~~~y~~~~d~~via~t~~l~pGes 92 (125)
T 3fsa_A 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASG--LDKDYLKPDDSRVIAHTKLIGSGEK 92 (125)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHC--GGGTTSCTTCTTCCEECCCBCTTCE
T ss_pred EecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcC--hhhccCCCCCccceeccceeCCCcE
Confidence 4446899986 999999999997442 22111 1 11100 111111 111 234899999
Q ss_pred EEEEEEec--CCceeeEEcCCchhhhhcceeeEEEEe
Q 009171 112 WTYKFQMK--DQIGTFNYFPSTKVHRAFGGFGAVNVA 146 (541)
Q Consensus 112 ~~y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (541)
.+..|+.+ .++|+|.|.|. .|. ||.|.|+|.
T Consensus 93 ~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 93 DSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 99999975 26999999999 444 899999984
No 119
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.21 E-value=0.00059 Score=57.67 Aligned_cols=76 Identities=13% Similarity=0.138 Sum_probs=51.6
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|++|+|++. + ..|-+..+.. .+.. . .+...+.+|+... ++|+.||.|
T Consensus 23 ~i~V~~GDTV~f~n~--~-~~Hnv~~~~~----------~~p~-g-----------~~~~~~~pg~t~s--~TF~~~G~y 75 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPT--D-KSHNAESVRE----------VWPE-G-----------VAPVKGGFSKEVV--FNAEKEGLY 75 (124)
T ss_dssp EEEECTTCEEEEECS--S-SSCCCEECTT----------TSCT-T-----------SCCCBCCTTCCEE--EECCSSEEE
T ss_pred EEEECCCCEEEEEEC--C-CCccEEEeCC----------cCCC-C-----------ccccccCCCCEEE--EEeCCCeEE
Confidence 477899999998644 3 5777766521 1110 0 0122345677544 455899999
Q ss_pred EEeechhhHhhcccEEEEEEecCCc
Q 009171 495 NLRSAIWERRYLGQELYLRVSNDER 519 (541)
Q Consensus 495 ~~HCHil~H~d~GMm~~~~V~~~~~ 519 (541)
.|||- .|...||...+.|.+|..
T Consensus 76 ~Y~C~--~H~~~GM~G~I~V~~p~~ 98 (124)
T 3ef4_A 76 VLKCA--PHYGMGMVVLVQVGKPVN 98 (124)
T ss_dssp EEECT--TTGGGTCEEEEEESSCTT
T ss_pred EEEcC--CCCcCCCEEEEEECCCCC
Confidence 99997 599999999999988643
No 120
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.15 E-value=0.00055 Score=58.21 Aligned_cols=75 Identities=20% Similarity=0.090 Sum_probs=50.1
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|++|.|++.|. .|-+..+... + ++.. ..+.+.||+. +.++|+.||.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---~H~v~~~~~~----------~-P~g~-----------~~f~s~pGet--~s~TF~~pG~y 76 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---GHNSALMKGG----------A-PEGA-----------ETWKGKINEE--ITVTLSKPGVY 76 (127)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECTTC----------S-CTTC-----------CCCBCCTTCC--CEEECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEccCc----------C-CCCc-----------cceecCCCCE--EEEEeCCCeEE
Confidence 47789999999976653 4555544210 1 1000 1112246765 45555899999
Q ss_pred EEeechhhHhhcccEEEEEEecCC
Q 009171 495 NLRSAIWERRYLGQELYLRVSNDE 518 (541)
Q Consensus 495 ~~HCHil~H~d~GMm~~~~V~~~~ 518 (541)
.|||-. |..+||-..+.|.++.
T Consensus 77 ~y~C~~--H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 77 MYQCAP--HVGMGMIGAIVVGEPA 98 (127)
T ss_dssp EEECTT--TGGGTCEEEEEESSCT
T ss_pred EEEeCC--CCcCCcEEEEEECcCC
Confidence 999994 9999999999998864
No 121
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.13 E-value=0.0016 Score=52.63 Aligned_cols=81 Identities=19% Similarity=0.162 Sum_probs=54.8
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcce
Q 009171 414 SVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGV 493 (541)
Q Consensus 414 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~ 493 (541)
..+.++.|+.|+|+ |.+...|-+.++...+ ...++.. ..-.+...+.||+...+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~~--n~~~~~H~v~~~~~~~------p~g~~~~---------~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAGFPHNIVFDEDAV------PAGVDAD---------AISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECTTSS------CTTCCHH---------HHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCEEEEEeCCCC------ccccccc---------cccccccccCCCCEEEEEc--CCCEE
Confidence 35789999998884 7766788776653110 0000000 0013456788998777655 88999
Q ss_pred eEEeechhhHhhcccEEEEEEe
Q 009171 494 WNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 494 w~~HCHil~H~d~GMm~~~~V~ 515 (541)
|.|+|-+ |..+||-..+.|.
T Consensus 79 y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEchh--hccCCCEEEEEEC
Confidence 9999987 9888999988773
No 122
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.08 E-value=0.0011 Score=54.53 Aligned_cols=71 Identities=13% Similarity=0.024 Sum_probs=49.0
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|+.|+|+ |.+...|.+++....- +.. ..++-.+.+|+...+.| +.||.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~~-----~~~----------------~~~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGIV-----GED----------------AFRGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTTS-----SSS----------------CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCCC-----Ccc----------------cccccccCCCCEEEEEe--CCCEEE
Confidence 4678999998885 7776778777653210 000 01233467787766655 889999
Q ss_pred EEeechhhHhhcccEEEEEE
Q 009171 495 NLRSAIWERRYLGQELYLRV 514 (541)
Q Consensus 495 ~~HCHil~H~d~GMm~~~~V 514 (541)
.|+|-+ |. ||-..+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999988 65 99988877
No 123
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.01 E-value=0.0013 Score=55.56 Aligned_cols=74 Identities=8% Similarity=0.089 Sum_probs=50.1
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.++++.|++|.|++.|. .|-+..+.. .+ ++.. +.+.+.|++...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~~----------~~-P~g~-----------~~f~~~pg~t~s~TF--~~pG~y 74 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---SHNVEAIKE----------IL-PEGV-----------ESFKSKINESYTLTV--TEPGLY 74 (123)
T ss_dssp EEEECTTEEEEEEESST---TCCCEECTT----------SS-CTTC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcCC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 47889999999987763 455554421 01 0000 111235677555555 899999
Q ss_pred EEeechhhHhhcccEEEEEEecC
Q 009171 495 NLRSAIWERRYLGQELYLRVSND 517 (541)
Q Consensus 495 ~~HCHil~H~d~GMm~~~~V~~~ 517 (541)
.|+|- .|...||-..+.|.++
T Consensus 75 ~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 75 GVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp EEECG--GGTTTTCEEEEEESSS
T ss_pred EEEeC--CCCcCCcEEEEEECCC
Confidence 99999 4999999999999873
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.94 E-value=0.0016 Score=55.89 Aligned_cols=72 Identities=13% Similarity=0.021 Sum_probs=50.1
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|+.|+|+ |.+...|-+++....- +. . -.++-.+.||+...+.| +.||.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~~-------g~-------------~-~~~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGIV-------GE-------------D-AFRGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTTS-------SS-------------S-CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCCC-------Cc-------------c-cccccccCCCCEEEEEc--CCCEEE
Confidence 4678999998885 7777788887753210 00 0 01233467888776665 789999
Q ss_pred EEeechhhHhhcccEEEEEEe
Q 009171 495 NLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 495 ~~HCHil~H~d~GMm~~~~V~ 515 (541)
.|||-+ |. ||-..+.|+
T Consensus 116 ~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp EEECSS--CT--TCEEEEEEC
T ss_pred EEEeCC--Cc--CCEEEEEEC
Confidence 999987 65 999988773
No 125
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.68 E-value=0.0097 Score=51.03 Aligned_cols=75 Identities=15% Similarity=0.208 Sum_probs=52.4
Q ss_pred ceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCch-hhhhc
Q 009171 59 PAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTK-VHRAF 137 (541)
Q Consensus 59 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~-~q~~~ 137 (541)
..|.++.|++|++.++|.. .. |+..... -| +..-+.||+.-++.|+. +++|+|+|+|... ...-.
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip~----~~---~k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H~ 125 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-VI-----HGFHVEG----TN---INVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQ 125 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-SC-----EEEEETT----SS---CEEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTST
T ss_pred CEEEEcCCCEEEEEEEeCC-cc-----ceEEecC----CC---ceeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCcC
Confidence 3799999999999999973 33 3332221 11 12346899988999985 7899999999542 11114
Q ss_pred ceeeEEEEec
Q 009171 138 GGFGAVNVAQ 147 (541)
Q Consensus 138 Gl~G~liV~~ 147 (541)
+|.|.++|.+
T Consensus 126 ~M~g~v~V~~ 135 (135)
T 2cua_A 126 NMFGTIVVKE 135 (135)
T ss_dssp TCEEEEEEEC
T ss_pred CCEEEEEEEC
Confidence 8999998863
No 126
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.53 E-value=0.0045 Score=52.28 Aligned_cols=74 Identities=8% Similarity=0.055 Sum_probs=47.9
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|++|.|+..+. .|-+.++- + ..++... .+.+.||+. +.++|+.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~--------~---~~p~~~~-----------~~~~~pG~t--~~~tF~~~G~y 74 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK---GHNVESIK--------D---MIPEGAE-----------KFKSKINEN--YVLTVTQPGAY 74 (123)
T ss_dssp EEEECTTCEEEEEESSS---SCCCEECT--------T---CSCTTCC-----------CCBCCTTCC--EEEECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CeEEEEec--------c---cCCCCcc-----------ceecCCCCE--EEEEeCCCEEE
Confidence 46789999988865543 45555431 1 1111000 011246765 44566889999
Q ss_pred EEeechhhHhhcccEEEEEEecC
Q 009171 495 NLRSAIWERRYLGQELYLRVSND 517 (541)
Q Consensus 495 ~~HCHil~H~d~GMm~~~~V~~~ 517 (541)
.|+|-. |...||-..+.|.++
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 75 LVKCTP--HYAMGMIALIAVGDS 95 (123)
T ss_dssp EEECTT--TGGGTCEEEEEESSS
T ss_pred EEEeCC--cccCCCEEEEEEcCC
Confidence 999984 999999999999874
No 127
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.38 E-value=0.0045 Score=52.24 Aligned_cols=39 Identities=18% Similarity=0.285 Sum_probs=31.0
Q ss_pred eCCCCEEEEEEEcCCcceeEEeechhhHhhcccEEEEEEecCC
Q 009171 476 VYPQSWSAIYVSLDNKGVWNLRSAIWERRYLGQELYLRVSNDE 518 (541)
Q Consensus 476 vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 518 (541)
+.+|+.. .++|+.||.|.|+|-. |...||-..+.|.++.
T Consensus 58 ~~pG~t~--~~tF~~~G~y~y~C~~--H~~~gM~G~I~V~~~~ 96 (123)
T 1pmy_A 58 TTVGQEA--VVKFDKEGVYGFKCAP--HYMMGMVALVVVGDKR 96 (123)
T ss_dssp CCTTSCE--EEECCSCEEEEEECST--TTTTTCEEEEEESSCC
T ss_pred cCCCCEE--EEEeCCCeEEEEEeCC--ccccCCEEEEEEcCCC
Confidence 3567754 4556889999999985 9999999999998643
No 128
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.32 E-value=0.021 Score=50.66 Aligned_cols=75 Identities=16% Similarity=0.224 Sum_probs=54.7
Q ss_pred ceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCCCCccCCCCeEEEEEEecCCceeeEEcCCch-hhhhc
Q 009171 59 PAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFNYFPSTK-VHRAF 137 (541)
Q Consensus 59 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~-~q~~~ 137 (541)
..|.++.|++|++.++|. +--++...-++ +++.-+.||+..++.|.+ +++|+|++.|..- ...-.
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViHsf~IP~l------------gik~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~Hs 158 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIHGFHVEGT------------NINVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQ 158 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCEEEEETTS------------SCEEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTGG
T ss_pred CEEEEeCCCeEEEEEecC-CceEEEEECCC------------CeEEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCcC
Confidence 579999999999999997 33333322222 122346799999999995 7899999999842 34445
Q ss_pred ceeeEEEEec
Q 009171 138 GGFGAVNVAQ 147 (541)
Q Consensus 138 Gl~G~liV~~ 147 (541)
+|.|-++|++
T Consensus 159 ~M~g~V~V~e 168 (168)
T 3s8f_B 159 NMFGTIVVKE 168 (168)
T ss_dssp GCEEEEEEEC
T ss_pred CCEEEEEEeC
Confidence 7999999874
No 129
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.19 E-value=0.013 Score=61.45 Aligned_cols=76 Identities=13% Similarity=0.111 Sum_probs=59.6
Q ss_pred eEEecCCCcEEEEEEEcCC---CCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCC
Q 009171 414 SVIPTTLHDYVEIVFQNNE---TSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDN 490 (541)
Q Consensus 414 ~~~~~~~g~~ve~vi~N~~---~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dn 490 (541)
..+.++.|+.|+|++.|.+ +..|.|.+.+.... +.+.||....+.|+++.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK---------------------------~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS---------------------------MEISPQQTSSITFVADK 610 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCce---------------------------eeeCCCCeEEEEEEcCC
Confidence 3578999999999999973 57788877643221 25778899999999999
Q ss_pred cceeEEeechhhHh-hcccEEEEEEec
Q 009171 491 KGVWNLRSAIWERR-YLGQELYLRVSN 516 (541)
Q Consensus 491 pG~w~~HCHil~H~-d~GMm~~~~V~~ 516 (541)
||.|.+||...-|. |.+|...+.|+.
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CEEEEEECCCcCCCCcccceEEEEEec
Confidence 99999999976553 568988887753
No 130
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.73 E-value=0.03 Score=49.62 Aligned_cols=91 Identities=11% Similarity=0.043 Sum_probs=59.9
Q ss_pred EEec-CCCcEEEEEEEcCCCCC-----CceeecCCceEEEEecccccCcc-------ccccCcC-CCC-CccceEEeCCC
Q 009171 415 VIPT-TLHDYVEIVFQNNETSV-----QSWHLDGSSFYVVGYGSGTWTAD-------IRKRYNL-NDA-ITRHTVQVYPQ 479 (541)
Q Consensus 415 ~~~~-~~g~~ve~vi~N~~~~~-----HP~HlHG~~F~Vl~~g~g~~~~~-------~~~~~~~-~~p-~~rDTv~vpp~ 479 (541)
.+++ +.|+.|.|+|.|.+... |-|- +...+ .++.. ....|-. .++ ....+..|.||
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~v-------i~~~~--~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLV-------IAKAE--DMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCE-------EEEGG--GHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEE-------eccCc--chhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 4678 89999999999987542 5443 33221 11000 0000100 011 12345678999
Q ss_pred CEEEEEEEcC--CcceeEEeechhhHhhcccEEEEEEe
Q 009171 480 SWSAIYVSLD--NKGVWNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 480 g~~~irf~~d--npG~w~~HCHil~H~d~GMm~~~~V~ 515 (541)
+...|.|.++ .||.|-|+|-+--|.. ||-..+.|.
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999998 8999999999877888 898888885
No 131
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.49 E-value=0.086 Score=44.64 Aligned_cols=92 Identities=7% Similarity=0.045 Sum_probs=60.6
Q ss_pred eEEecCCC-cEEEEEEEcCCCC-----CCceeecCCceEEEEecccccCc--------cccccCcC-CCC-CccceEEeC
Q 009171 414 SVIPTTLH-DYVEIVFQNNETS-----VQSWHLDGSSFYVVGYGSGTWTA--------DIRKRYNL-NDA-ITRHTVQVY 477 (541)
Q Consensus 414 ~~~~~~~g-~~ve~vi~N~~~~-----~HP~HlHG~~F~Vl~~g~g~~~~--------~~~~~~~~-~~p-~~rDTv~vp 477 (541)
..++++.| +.+.+++.|.+.. .|-|- +...+. ..+ .....+-. .++ ....+..|.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~v-------i~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~ 88 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWV-------LAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIG 88 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCE-------EEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBC
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceE-------EecCcc--hhhhHHHhhhccccccccccccccceeeeeEEC
Confidence 35788999 9999999998754 35543 333221 100 00000100 011 123456689
Q ss_pred CCCEEEEEEEcC---CcceeEEeechhhHhhcccEEEEEEe
Q 009171 478 PQSWSAIYVSLD---NKGVWNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 478 p~g~~~irf~~d---npG~w~~HCHil~H~d~GMm~~~~V~ 515 (541)
||++..+.|.++ .||.|-|.|-+--|.. ||-..+.|.
T Consensus 89 pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 89 GGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 999999999997 8999999998877888 898888875
No 132
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.24 E-value=0.027 Score=47.33 Aligned_cols=72 Identities=7% Similarity=0.051 Sum_probs=45.7
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|++|.|+ |.+. .|-++++.. .+.. .. ..+.+.+|+...+. |+.||.|
T Consensus 22 ~i~V~~GdtV~f~--n~d~-~H~v~~~~~----------~~p~-~~-----------~~~~~~~g~t~~~t--F~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFI--PTDK-GHNVETIKG----------MIPD-GA-----------EAFKSKINENYKVT--FTAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEE--ESSS-SCCCEECTT----------CSCT-TC-----------CCCBCCTTCCEEEE--ECSCEEE
T ss_pred EEEECCCCEEEEE--ECCC-CcEEEEccc----------ccCC-Cc-----------ceeecCCCCEEEEE--eCCCEEE
Confidence 4678999998885 4443 566666531 1110 00 01123467765554 5899999
Q ss_pred EEeechhhHhhcccEEEEEEecC
Q 009171 495 NLRSAIWERRYLGQELYLRVSND 517 (541)
Q Consensus 495 ~~HCHil~H~d~GMm~~~~V~~~ 517 (541)
.|+|-+ |.. |-..+.|.++
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp EEEETT--EEE--EEEEEEESSS
T ss_pred EEEeCC--Ccc--CEEEEEEeCC
Confidence 999987 554 9999989773
No 133
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.09 E-value=0.075 Score=45.41 Aligned_cols=70 Identities=14% Similarity=0.159 Sum_probs=50.7
Q ss_pred EecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcceeE
Q 009171 416 IPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVWN 495 (541)
Q Consensus 416 ~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~ 495 (541)
+.++.|+.|+|++.|.+ ..|. |++-+.+ --+.+.||....+.|+++.||.|.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hs-------f~ip~~~--------------------~k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHG-------FHVEGTN--------------------INVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEE-------EEETTSS--------------------CEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccce-------EEecCCC--------------------ceeEeCCCCcEEEEEEcCCCEEEE
Confidence 57889999999999874 4444 3332111 114456787788999999999999
Q ss_pred Eeech---hhHhhcccEEEEEEe
Q 009171 496 LRSAI---WERRYLGQELYLRVS 515 (541)
Q Consensus 496 ~HCHi---l~H~d~GMm~~~~V~ 515 (541)
++|.. ..| .+|-..+.|+
T Consensus 114 ~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTS--TTCEEEEEEE
T ss_pred EECcccCCCCc--CCCEEEEEEE
Confidence 99976 345 5888888875
No 134
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.06 E-value=0.13 Score=43.51 Aligned_cols=91 Identities=10% Similarity=0.042 Sum_probs=59.5
Q ss_pred EEec-CCCcEEEEEEEcCCCCC-----CceeecCCceEEEEecccccCcc--------ccccCcC-CCC-CccceEEeCC
Q 009171 415 VIPT-TLHDYVEIVFQNNETSV-----QSWHLDGSSFYVVGYGSGTWTAD--------IRKRYNL-NDA-ITRHTVQVYP 478 (541)
Q Consensus 415 ~~~~-~~g~~ve~vi~N~~~~~-----HP~HlHG~~F~Vl~~g~g~~~~~--------~~~~~~~-~~p-~~rDTv~vpp 478 (541)
.+.+ +.|+.|.+++.|.+..+ |-|-| .... ..... ....|-. .++ ....|..|.|
T Consensus 18 ~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi--------~~~~-~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 88 (128)
T 2iaa_C 18 SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVV--------SKKS-DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGG 88 (128)
T ss_dssp EEEECTTCSEEEEEEEECSCSCHHHHCBCCEE--------EETT-HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEEecCCcEEEEEEEECCCCcccCCCceEEE--------cccc-chhhHHHhhhhccccccccccccchhhccceeeCC
Confidence 4678 88999999999998553 65532 2211 11000 0001100 111 1234556899
Q ss_pred CCEEEEEEEcC--Ccce-eEEeechhhHhhcccEEEEEEe
Q 009171 479 QSWSAIYVSLD--NKGV-WNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 479 ~g~~~irf~~d--npG~-w~~HCHil~H~d~GMm~~~~V~ 515 (541)
|++..+.|.+. .+|. |-|.|-+--|.. ||-..+.|.
T Consensus 89 Ges~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 89 GETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999999998 8995 999999887888 899888875
No 135
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=93.93 E-value=0.27 Score=41.51 Aligned_cols=91 Identities=9% Similarity=0.014 Sum_probs=59.0
Q ss_pred EEec-CCCcEEEEEEEcCCCC-----CCceeecCCceEEEEecccccCcc--------ccccCcC-CCC-CccceEEeCC
Q 009171 415 VIPT-TLHDYVEIVFQNNETS-----VQSWHLDGSSFYVVGYGSGTWTAD--------IRKRYNL-NDA-ITRHTVQVYP 478 (541)
Q Consensus 415 ~~~~-~~g~~ve~vi~N~~~~-----~HP~HlHG~~F~Vl~~g~g~~~~~--------~~~~~~~-~~p-~~rDTv~vpp 478 (541)
.+++ +.|+.|.+++.|.+.. .|-|- +...+ ..... ....|-. .++ ....+..|.|
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~v-------i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 19 EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLV-------LTKDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHCBCCE-------EEEGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred eEEEecCCCEEEEEEEECCCcccccCcceEE-------EcCcc--chhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 4778 8899999999999854 35543 33221 11100 0001100 111 1224556899
Q ss_pred CCEEEEEEEcC--Ccce-eEEeechhhHhhcccEEEEEEe
Q 009171 479 QSWSAIYVSLD--NKGV-WNLRSAIWERRYLGQELYLRVS 515 (541)
Q Consensus 479 ~g~~~irf~~d--npG~-w~~HCHil~H~d~GMm~~~~V~ 515 (541)
|++..+.|.++ .||. |-|.|-+--|.. ||-..+.|.
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999999998 7866 999998877888 898888875
No 136
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=92.78 E-value=0.4 Score=42.39 Aligned_cols=73 Identities=12% Similarity=0.192 Sum_probs=54.9
Q ss_pred EecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcceeE
Q 009171 416 IPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVWN 495 (541)
Q Consensus 416 ~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~ 495 (541)
+.++.|+.|++.+.|. +..|.|-+=... =-+.+-||....+.|.++.||.|.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~lg---------------------------ik~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGTN---------------------------INVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTSS---------------------------CEEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCCC---------------------------eEEEecCCceeEEEEEeCCCEEEE
Confidence 5688999999999987 456666553211 113355777788999999999999
Q ss_pred Eeechh-hHhhcccEEEEEEec
Q 009171 496 LRSAIW-ERRYLGQELYLRVSN 516 (541)
Q Consensus 496 ~HCHil-~H~d~GMm~~~~V~~ 516 (541)
+.|... -+-|.+|-..+.|++
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEEC
T ss_pred EECCcCCCCCcCCCEEEEEEeC
Confidence 999964 467789999998863
No 137
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=92.55 E-value=0.76 Score=38.35 Aligned_cols=89 Identities=11% Similarity=0.137 Sum_probs=58.4
Q ss_pred eeEEecCC-CcEEEEEEEcCCCC-----CCceeecCCceEEEEecccccCc---c----c-cccCc-C-CCCCccceEEe
Q 009171 413 ASVIPTTL-HDYVEIVFQNNETS-----VQSWHLDGSSFYVVGYGSGTWTA---D----I-RKRYN-L-NDAITRHTVQV 476 (541)
Q Consensus 413 ~~~~~~~~-g~~ve~vi~N~~~~-----~HP~HlHG~~F~Vl~~g~g~~~~---~----~-~~~~~-~-~~p~~rDTv~v 476 (541)
...+.++. |+.|.++|.|.+.. .|-| ||+... .... + . ...|- . .......|..|
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~--------Vl~~~~-~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l 87 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNW--------VLSTAA-DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLI 87 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCC--------EEEEHH-HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCB
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceE--------EEcccc-hHHHHHHHHHhcChhhccCCCCCccceecccee
Confidence 34578875 99999999999854 3654 555431 1110 0 0 01111 1 11234467779
Q ss_pred CCCCEEEEEEEcC---CcceeEEeechhhHhhcccEEEEEE
Q 009171 477 YPQSWSAIYVSLD---NKGVWNLRSAIWERRYLGQELYLRV 514 (541)
Q Consensus 477 pp~g~~~irf~~d---npG~w~~HCHil~H~d~GMm~~~~V 514 (541)
.||+...|.|.+. .+|.|-|-|- -|. ||-..+.|
T Consensus 88 ~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 88 GSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp CTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred CCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 9999999999998 7999999999 688 89888876
No 138
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=92.51 E-value=0.63 Score=39.15 Aligned_cols=93 Identities=11% Similarity=0.058 Sum_probs=58.9
Q ss_pred eEEec-CCCcEEEEEEEcCCCC-----CCceeecCCceEEEEecccc------cCccccccCcC-CCC-CccceEEeCCC
Q 009171 414 SVIPT-TLHDYVEIVFQNNETS-----VQSWHLDGSSFYVVGYGSGT------WTADIRKRYNL-NDA-ITRHTVQVYPQ 479 (541)
Q Consensus 414 ~~~~~-~~g~~ve~vi~N~~~~-----~HP~HlHG~~F~Vl~~g~g~------~~~~~~~~~~~-~~p-~~rDTv~vpp~ 479 (541)
..+++ +.|+.|.+++.|.+.. .|-|-| ...+.-. ........|-. .++ ....|-.|.||
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pG 90 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAG 90 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTT
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhccccccccccccchhheeeeeeCCC
Confidence 35788 8999999999998754 365533 2211000 00000000100 111 12234468999
Q ss_pred CEEEEEEEcC--Ccce-eEEeechhhHhhcccEEEEEE
Q 009171 480 SWSAIYVSLD--NKGV-WNLRSAIWERRYLGQELYLRV 514 (541)
Q Consensus 480 g~~~irf~~d--npG~-w~~HCHil~H~d~GMm~~~~V 514 (541)
++..+.|.+. .||. |-|.|-+--|.. ||-..+.|
T Consensus 91 et~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 91 EKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp CEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred CEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 9999999998 7876 999999888888 88888876
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=84.22 E-value=9.7 Score=31.37 Aligned_cols=71 Identities=13% Similarity=0.302 Sum_probs=50.5
Q ss_pred cCCEE--EEEEEEcCCCCeEEEEEc-Cce--eEEEeecCcccc--------eeeeeEEEEcCCceEEEEEEeCC--CCce
Q 009171 210 KGKTY--KFRVSNVGIATSINFRIQ-GHT--LTLVEVEGAHCL--------QESYESIDIHVGQSVAVVVAMHG--PPKD 274 (541)
Q Consensus 210 ~G~~~--rlRliNa~~~~~~~~~i~-~h~--~~via~DG~~~~--------p~~~d~v~l~pgeR~dv~v~~~~--~~g~ 274 (541)
.|+.+ .|.+.|.+... ..+.+. |+. |.|...+|..+- .+......|.|||...+-...++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~~~-v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERA-IEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSSC-EEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCCc-EEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 45544 77788988854 366664 554 455555576552 34578999999999999999884 5899
Q ss_pred eEEEEec
Q 009171 275 YYIVAST 281 (541)
Q Consensus 275 ~~i~~~~ 281 (541)
|.+++.-
T Consensus 95 Ytl~a~l 101 (120)
T 3isy_A 95 YEVKVTF 101 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998764
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=62.39 E-value=32 Score=31.12 Aligned_cols=63 Identities=13% Similarity=0.097 Sum_probs=46.5
Q ss_pred ccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEeccc
Q 009171 204 LSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRF 283 (541)
Q Consensus 204 p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~ 283 (541)
..+.++.|+.+||+|-+... .+.|.|...... +..-||..-.+-+.++ .+|.|...|..+.
T Consensus 41 n~l~lP~g~~V~~~lTS~DV--iHSF~IP~lgvK----------------~daiPGr~n~l~~~~~-~pG~y~g~CsE~C 101 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNSV--MHSFFIPRLGSQ----------------IYAMAGMQTRLHLIAN-EPGTYDGICAEIC 101 (205)
T ss_dssp SEEEEETTSCEEEEEEESSS--CEEEEEGGGTEE----------------EEECTTCCEEEEECCS-SSEEEEEEECSCC
T ss_pred ceEEEeCCCEEEEEEecCCc--eeeEEecccCcE----------------EEecCCceEEEEEEeC-CCeEEEEEccccc
Confidence 47899999999999988644 556666654332 3345777778888787 6999999998754
Q ss_pred cC
Q 009171 284 TK 285 (541)
Q Consensus 284 ~~ 285 (541)
..
T Consensus 102 G~ 103 (205)
T 1cyx_A 102 GP 103 (205)
T ss_dssp ST
T ss_pred cc
Confidence 43
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=55.39 E-value=16 Score=33.09 Aligned_cols=77 Identities=12% Similarity=0.107 Sum_probs=53.6
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|+.|++.|.+.+ ..|.| +|-+-+. . +.+-||....+.|.++.||.|
T Consensus 42 ~l~lP~g~~V~~~lTS~D-ViHSF-------~IP~lgv-----------------K---~daiPGr~n~l~~~~~~pG~y 93 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS-VMHSF-------FIPRLGS-----------------Q---IYAMAGMQTRLHLIANEPGTY 93 (205)
T ss_dssp EEEEETTSCEEEEEEESS-SCEEE-------EEGGGTE-----------------E---EEECTTCCEEEEECCSSSEEE
T ss_pred eEEEeCCCEEEEEEecCC-ceeeE-------EecccCc-----------------E---EEecCCceEEEEEEeCCCeEE
Confidence 477899999999999874 34444 4432221 1 223457778889999999999
Q ss_pred EEeechhhHh-hcccEEEEEEe-cCCc
Q 009171 495 NLRSAIWERR-YLGQELYLRVS-NDER 519 (541)
Q Consensus 495 ~~HCHil~H~-d~GMm~~~~V~-~~~~ 519 (541)
...|-.+-.. |..|-..++|+ .+++
T Consensus 94 ~g~CsE~CG~~Hs~M~~~v~vv~~~~~ 120 (205)
T 1cyx_A 94 DGICAEICGPGHSGMKFKAIATPDRAA 120 (205)
T ss_dssp EEEECSCCSTTSTTCCEEEEEESSHHH
T ss_pred EEEcccccccchhhceEEEEEECCHHH
Confidence 9999877544 55677788887 5544
No 142
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=53.49 E-value=28 Score=28.23 Aligned_cols=46 Identities=20% Similarity=0.462 Sum_probs=31.4
Q ss_pred EEEEEEEEcCCC-CeEEEEEcCc-eeEEEeecCcccceeeeeEEEEcCCceEEEEEEe
Q 009171 213 TYKFRVSNVGIA-TSINFRIQGH-TLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAM 268 (541)
Q Consensus 213 ~~rlRliNa~~~-~~~~~~i~~h-~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~ 268 (541)
.|+|+|+|.+.. +.+.|.+.|. .++++ | + ..+.+.||+..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEE
Confidence 599999999955 4667777664 23332 2 1 14999999987766654
No 143
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=53.34 E-value=20 Score=34.58 Aligned_cols=78 Identities=10% Similarity=0.241 Sum_probs=57.2
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcce
Q 009171 414 SVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGV 493 (541)
Q Consensus 414 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~ 493 (541)
+.+.++.|+.|++.+.+.+ ..|.|.+=. -+ =-+.+-||....+.|.++.||.
T Consensus 189 N~lvlP~g~~V~~~ltS~D-ViHsf~iP~-------lg--------------------~k~daiPG~~n~~~~~~~~~G~ 240 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-VIHAWTIPA-------FA--------------------VKQDAVPGRIAQLWFSVDQEGV 240 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-SCEEEEEGG-------GT--------------------EEEEECTTCCEEEEEECSSSEE
T ss_pred ceEEEEcCCEEEEEEEeCC-ccceeeEcc-------cC--------------------ceEEecCCceEEEEEEeCCCEE
Confidence 4578899999999999865 456655532 11 1122346777789999999999
Q ss_pred eEEeechhh-HhhcccEEEEEEecCCc
Q 009171 494 WNLRSAIWE-RRYLGQELYLRVSNDER 519 (541)
Q Consensus 494 w~~HCHil~-H~d~GMm~~~~V~~~~~ 519 (541)
|...|.-.- .-|..|-..++|+.+++
T Consensus 241 y~g~CsE~CG~~Hs~M~~~v~vvs~~~ 267 (298)
T 3hb3_B 241 YFGQCSELCGINHAYMPIVVKAVSQEK 267 (298)
T ss_dssp EEECCCSCCSTTTTSCCEEEEEECHHH
T ss_pred EEEEcccccCcCccCCeeEEEEEcHHH
Confidence 999999764 55778888888888765
No 144
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=49.02 E-value=1.1e+02 Score=25.01 Aligned_cols=73 Identities=11% Similarity=0.079 Sum_probs=47.3
Q ss_pred eeeEEEECCCCcCceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCCCCC----CCccCCCCeEEEEEEecC-
Q 009171 46 PQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGT----NCPIPPNSNWTYKFQMKD- 120 (541)
Q Consensus 46 ~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~----q~~i~pG~~~~y~f~~~~- 120 (541)
...+-..|-+--.=+|+..-|++..+.|.+... ...| -|+||-... ...|+||++.+|+...++
T Consensus 21 ~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G---~~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~ 89 (120)
T 3isy_A 21 KFNMSLKNQSERAIEFQFSTGQKFELVVYDSEH---KERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEV 89 (120)
T ss_dssp EEEEEEEECSSSCEEEEESSSCCEEEEEECTTC---CEEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSC
T ss_pred EEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCC---CEEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCC
Confidence 333444454433347788888888888887532 1222 346665443 346999999999999863
Q ss_pred -CceeeEEcC
Q 009171 121 -QIGTFNYFP 129 (541)
Q Consensus 121 -~~Gt~wYH~ 129 (541)
.+|+|..+.
T Consensus 90 ~~pG~Ytl~a 99 (120)
T 3isy_A 90 PEPGTYEVKV 99 (120)
T ss_dssp CCSEEEEEEE
T ss_pred CCCccEEEEE
Confidence 489998654
No 145
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=46.40 E-value=28 Score=32.83 Aligned_cols=78 Identities=10% Similarity=0.276 Sum_probs=54.9
Q ss_pred eEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcce
Q 009171 414 SVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGV 493 (541)
Q Consensus 414 ~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~ 493 (541)
+.+.++.|+.|++.+.+.+ ..|.|-+= +-+. ..| +-||....+.|.++.||.
T Consensus 171 n~l~lP~g~~v~~~~tS~D-ViHsf~ip-------~l~~-----------------k~d---a~PG~~n~~~~~~~~~G~ 222 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD-VIHSWTVP-------AFGV-----------------KQD---AVPGRLAQLWFRAEREGI 222 (262)
T ss_dssp SCEEEETTSEEEEEEEESS-SCEEEEEG-------GGTE-----------------EEE---ECBTCCEEEEEECCSCEE
T ss_pred ceEEEecCCEEEEEEEECc-ccceeeec-------ccCc-----------------eEE---ecCCceeEEEEecCCcEE
Confidence 4578899999999999774 44554443 2221 123 335677788999999999
Q ss_pred eEEeechhh-HhhcccEEEEEEecCCc
Q 009171 494 WNLRSAIWE-RRYLGQELYLRVSNDER 519 (541)
Q Consensus 494 w~~HCHil~-H~d~GMm~~~~V~~~~~ 519 (541)
|...|.-.- --|..|-..++|+.+++
T Consensus 223 y~g~Cse~CG~~H~~M~~~v~vv~~~~ 249 (262)
T 2gsm_B 223 FFGQCSELCGISHAYMPITVKVVSEEA 249 (262)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHHH
T ss_pred EEEEChHhcccCcccCeEEEEEEcHHH
Confidence 999998764 34667777888877654
No 146
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=42.33 E-value=77 Score=29.78 Aligned_cols=62 Identities=10% Similarity=0.072 Sum_probs=45.7
Q ss_pred ccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEeccc
Q 009171 204 LSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRF 283 (541)
Q Consensus 204 p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~ 283 (541)
..+.++.|+.+||++-+... .+.|.+.....+ +..-||..-.+-+.++ .+|.|...|+...
T Consensus 171 n~l~lP~g~~v~~~~tS~DV--iHsf~ip~l~~k----------------~da~PG~~n~~~~~~~-~~G~y~g~Cse~C 231 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGADV--IHSWTVPAFGVK----------------QDAVPGRLAQLWFRAE-REGIFFGQCSELC 231 (262)
T ss_dssp SCEEEETTSEEEEEEEESSS--CEEEEEGGGTEE----------------EEECBTCCEEEEEECC-SCEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEECcc--cceeeecccCce----------------EEecCCceeEEEEecC-CcEEEEEEChHhc
Confidence 57999999999999987544 556666654332 2345777778888887 6999999998654
Q ss_pred c
Q 009171 284 T 284 (541)
Q Consensus 284 ~ 284 (541)
+
T Consensus 232 G 232 (262)
T 2gsm_B 232 G 232 (262)
T ss_dssp S
T ss_pred c
Confidence 3
No 147
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=41.77 E-value=23 Score=28.12 Aligned_cols=51 Identities=16% Similarity=0.072 Sum_probs=33.5
Q ss_pred EEEEEEEECCCCC---eeEeeCCcCCCCCCCCCCCCCC-CCccCCCCeEEEEEEe-cCCcee
Q 009171 68 NIIVNLINKLDEP---FLITWNGVKQRRTTWQDGVLGT-NCPIPPNSNWTYKFQM-KDQIGT 124 (541)
Q Consensus 68 ~v~v~~~N~l~~~---~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~-~~~~Gt 124 (541)
.+.|+|+|-|+.+ -.++.-|.-. ..+ --. ...|.||++..+++.. |..+|.
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL-----~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGL-----QRP-KILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTT-----EEE-EEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEECCCCCcccCEEEEEECCCC-----Ccc-eEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 5778899999765 3566666422 222 111 3469999999999887 455675
No 148
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=40.38 E-value=87 Score=30.01 Aligned_cols=62 Identities=13% Similarity=0.119 Sum_probs=46.4
Q ss_pred ccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEeccc
Q 009171 204 LSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRF 283 (541)
Q Consensus 204 p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~ 283 (541)
..+.++.|+.+||++-+... .|.|.|.....+ +..-||..-.+.+.++ .+|.|...|....
T Consensus 189 N~lvlP~g~~V~~~ltS~DV--iHsf~iP~lg~k----------------~daiPG~~n~~~~~~~-~~G~y~g~CsE~C 249 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATDV--IHAWTIPAFAVK----------------QDAVPGRIAQLWFSVD-QEGVYFGQCSELC 249 (298)
T ss_dssp SCEEEESSSEEEEEEEESSS--CEEEEEGGGTEE----------------EEECTTCCEEEEEECS-SSEEEEECCCSCC
T ss_pred ceEEEEcCCEEEEEEEeCCc--cceeeEcccCce----------------EEecCCceEEEEEEeC-CCEEEEEEccccc
Confidence 57899999999999988554 556666654332 3345788888888888 6999999998754
Q ss_pred c
Q 009171 284 T 284 (541)
Q Consensus 284 ~ 284 (541)
+
T Consensus 250 G 250 (298)
T 3hb3_B 250 G 250 (298)
T ss_dssp S
T ss_pred C
Confidence 4
No 149
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=39.01 E-value=29 Score=28.22 Aligned_cols=40 Identities=15% Similarity=0.100 Sum_probs=0.0
Q ss_pred EEEEecCCceeeEEcCCchhhhhcceeeEE-EEecCCCCCCC
Q 009171 114 YKFQMKDQIGTFNYFPSTKVHRAFGGFGAV-NVAQRSVISVP 154 (541)
Q Consensus 114 y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~l-iV~~~~~~~~~ 154 (541)
..+++ +.+|++||-|-...|=..||..+| .|........+
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~~~~~~ 112 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGGAGGGA 112 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC-------
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCCCCCCC
No 150
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=37.43 E-value=44 Score=27.58 Aligned_cols=62 Identities=10% Similarity=0.150 Sum_probs=35.2
Q ss_pred CceEEEecCCEEEEEEE---ECCCCC--eeEee--CCcCCCC-CCCCCCCCCCCCccCCCCeEEEEEEec
Q 009171 58 GPAIEAVTNDNIIVNLI---NKLDEP--FLITW--NGVKQRR-TTWQDGVLGTNCPIPPNSNWTYKFQMK 119 (541)
Q Consensus 58 GP~i~v~~Gd~v~v~~~---N~l~~~--~~iH~--HG~~~~~-~~~~DG~~~~q~~i~pG~~~~y~f~~~ 119 (541)
.+.=.+++|+.+.|.+. |..... +.+|+ .|+..+- ....|+=-++.|||.+|+.++|.+.++
T Consensus 24 ~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 24 SDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp TSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBCTTCEEEEEEEEE
T ss_pred CCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCcccCCEEEEEEEEeE
Confidence 34456788888888877 221111 22322 3444321 112233222379999999999997763
No 151
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=36.14 E-value=44 Score=27.64 Aligned_cols=61 Identities=18% Similarity=0.298 Sum_probs=34.6
Q ss_pred ceEEEecCCEEEEEEE---ECCCCCee--Eee--CCcCCC-CCCCCCCCC-CCCCccCCCCeEEEEEEec
Q 009171 59 PAIEAVTNDNIIVNLI---NKLDEPFL--ITW--NGVKQR-RTTWQDGVL-GTNCPIPPNSNWTYKFQMK 119 (541)
Q Consensus 59 P~i~v~~Gd~v~v~~~---N~l~~~~~--iH~--HG~~~~-~~~~~DG~~-~~q~~i~pG~~~~y~f~~~ 119 (541)
+.=.+++|+.+.|.+. |....... +|+ -|+..+ ..+..|+=. ++.|||.+|+.++|.+.++
T Consensus 26 ~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 26 QPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp SSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 4456678888888776 22222212 221 233331 112234332 3479999999999998875
No 152
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=35.57 E-value=43 Score=30.80 Aligned_cols=79 Identities=8% Similarity=0.111 Sum_probs=54.1
Q ss_pred eeEEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCcc
Q 009171 413 ASVIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKG 492 (541)
Q Consensus 413 ~~~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG 492 (541)
.+.+.++.|+.|++.+.+.+ -.|.|-+ -+-|. ..| .-||..-.+.|.++.||
T Consensus 139 dn~lvlP~~~~Vr~~vtS~D-ViHsf~v-------P~lg~-----------------K~D---aiPGr~n~~~~~~~~~G 190 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSED-VLHSWAV-------PSLGL-----------------KTD---AIPGRLNQTTLMSSRPG 190 (227)
T ss_dssp SSCEEEETTSCEEEEEEESS-SCEEEEE-------GGGTE-----------------EEE---ECTTCCEEEEECCSSCE
T ss_pred CceEEEecCCEEEEEEEeCc-ccceeee-------cccCc-----------------EEE---ecCCceEEEEEecCCcE
Confidence 34578899999999998765 4555444 22221 123 23566677889999999
Q ss_pred eeEEeechhhH-hhcccEEEEEEecCCc
Q 009171 493 VWNLRSAIWER-RYLGQELYLRVSNDER 519 (541)
Q Consensus 493 ~w~~HCHil~H-~d~GMm~~~~V~~~~~ 519 (541)
.|...|.-.-- -|..|-..++|+.+++
T Consensus 191 ~y~g~Cse~CG~~Hs~M~~~v~vv~~~~ 218 (227)
T 1v54_B 191 LYYGQCSEICGSNHSFMPIVLELVPLKY 218 (227)
T ss_dssp EEEECCCSCCSTTGGGCCEEEEEECHHH
T ss_pred EEEEEehhhcccccccCeEEEEEEcHHH
Confidence 99999987643 3556777888877654
No 153
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=32.50 E-value=2.1e+02 Score=23.47 Aligned_cols=65 Identities=12% Similarity=0.090 Sum_probs=43.3
Q ss_pred EEecCCEE--EEEEEEcCCCCeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCC-CCceeEEEEe
Q 009171 207 TGQKGKTY--KFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHG-PPKDYYIVAS 280 (541)
Q Consensus 207 ~v~~G~~~--rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~-~~g~~~i~~~ 280 (541)
.+.+|+.+ +..+-|.|....-.+.+ .++ .||..+. ...+.|++|+...|.+.... .+|.|.+.+.
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~ly-vng~~v~---t~~v~La~G~s~tv~f~~~~~~~G~~~v~Av 95 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RVY-INGTLYK---NWTVSLGPKEEKVLTFNWTPTQEGMYRINAT 95 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EEE-ETTEEEE---EEEEEECTTCEEEEEEEECCSSCEEEEEEEE
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EEE-ECCEEEe---eEEeccCCCCeEEEEEEEEcCCCcEEEEEEE
Confidence 77888876 67788999776433332 222 2665443 22457999999888888653 4788877765
No 154
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=31.73 E-value=86 Score=30.73 Aligned_cols=57 Identities=19% Similarity=0.352 Sum_probs=33.8
Q ss_pred CCcCceEEEecCCEEEEEEEECCCCCe--------eEeeCCcCCCCCCCCCCCC-------C---C-CCccCCCCeEEEE
Q 009171 55 QFPGPAIEAVTNDNIIVNLINKLDEPF--------LITWNGVKQRRTTWQDGVL-------G---T-NCPIPPNSNWTYK 115 (541)
Q Consensus 55 ~~pGP~i~v~~Gd~v~v~~~N~l~~~~--------~iH~HG~~~~~~~~~DG~~-------~---~-q~~i~pG~~~~y~ 115 (541)
++||-++++ .++++|..+.+. +++|-.-.+. .+..+-| | . ..||+|||+.+.+
T Consensus 260 ~vpgR~l~~------~~~VtN~g~~pvrlgeF~tA~vrFln~~~~--~~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~ 331 (382)
T 1yew_A 260 RVPGRAMRM------KLTITNHGNSPIRLGEFYTASVRFLDSDVY--KDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVD 331 (382)
T ss_dssp ESSCSEEEE------EEEEEECSSSCEEEEEEECSSCEEECTTTC--CCCSCCCGGGEETTCEEESCCSCBCTTCEEEEE
T ss_pred ecCCcEEEE------EEEEEcCCCCceEeeeEEeccEEEeCCccc--ccCCCChHHhhccCCceeCCCCCcCCCceeEEE
Confidence 567777754 477788875543 4455332211 1112222 2 2 6789999999999
Q ss_pred EEec
Q 009171 116 FQMK 119 (541)
Q Consensus 116 f~~~ 119 (541)
.++.
T Consensus 332 v~a~ 335 (382)
T 1yew_A 332 VTAS 335 (382)
T ss_dssp EEEE
T ss_pred EEee
Confidence 9873
No 155
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=29.04 E-value=98 Score=27.18 Aligned_cols=84 Identities=7% Similarity=-0.038 Sum_probs=48.1
Q ss_pred eEEEcCCCCCccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccceee-----eeE-EE-EcCCceEEEEE
Q 009171 194 ALLINGHHNSLSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQES-----YES-ID-IHVGQSVAVVV 266 (541)
Q Consensus 194 ~~lvNG~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p~~-----~d~-v~-l~pgeR~dv~v 266 (541)
..+.|..+. +.-.+..|+.++||+-=-.....-.+.+ -|.+-..+|..+--.. ..- -. +.+|+.+.+.+
T Consensus 53 v~l~d~~G~-~~~~~~~Ge~v~l~i~~~~~~~i~~~v~---G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v~f 128 (188)
T 2r5o_A 53 YHIQSAGVD-FPPSLTGNQQTDFLMKVVFEYDFDCVVP---GILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVFKF 128 (188)
T ss_dssp EEEEETTEE-SCSSEETTCEEEEEEEEEESSCEEEEEE---EEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEEEE
T ss_pred EEEEECCCC-EeeEEeCCCEEEEEEEEEECCcCCccEE---EEEEECCCCCEEEecCcccccccccccccCCCCEEEEEE
Confidence 445666655 5566889999888776544433222221 2445555666552111 111 23 57899766655
Q ss_pred EeCC--CCceeEEEEec
Q 009171 267 AMHG--PPKDYYIVAST 281 (541)
Q Consensus 267 ~~~~--~~g~~~i~~~~ 281 (541)
.++- .+|.|.+.+.-
T Consensus 129 ~f~l~L~~G~Y~lsv~i 145 (188)
T 2r5o_A 129 SLPVDLNSGDYLLSFGI 145 (188)
T ss_dssp EEECCBCSEEEEEEEEE
T ss_pred EEecccCCCeEEEEEEE
Confidence 5542 58999998763
No 156
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=28.90 E-value=49 Score=27.37 Aligned_cols=65 Identities=15% Similarity=0.236 Sum_probs=36.3
Q ss_pred EEEEEECCCCCe---eEeeCCcCCCC---CCCCCCCCCCCCccCCCCeEEEEEEe--cCCceeeEEcCCchhhhhcceee
Q 009171 70 IVNLINKLDEPF---LITWNGVKQRR---TTWQDGVLGTNCPIPPNSNWTYKFQM--KDQIGTFNYFPSTKVHRAFGGFG 141 (541)
Q Consensus 70 ~v~~~N~l~~~~---~iH~HG~~~~~---~~~~DG~~~~q~~i~pG~~~~y~f~~--~~~~Gt~wYH~H~~~q~~~Gl~G 141 (541)
.|++.|....+. +=||.=....+ .-.-+||-|-|.-|.||++|.|.=-. +.+.|+ |.|
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg~~L~tp~G~--------------M~G 99 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTSGVLLETEQGQ--------------MQG 99 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEEEEEESSSCEE--------------EEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeCCcCcCCCcEE--------------EEE
Confidence 466778766553 55775221111 01124443337779999988885332 344565 677
Q ss_pred EEEEecC
Q 009171 142 AVNVAQR 148 (541)
Q Consensus 142 ~liV~~~ 148 (541)
-+...+.
T Consensus 100 ~y~m~~~ 106 (127)
T 2f1e_A 100 HYDMVAD 106 (127)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 7766653
No 157
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=27.09 E-value=68 Score=25.67 Aligned_cols=39 Identities=18% Similarity=0.227 Sum_probs=0.0
Q ss_pred EEEEEecCCceeeEEcCCchhhhhcceeeEEEEecCCCCC
Q 009171 113 TYKFQMKDQIGTFNYFPSTKVHRAFGGFGAVNVAQRSVIS 152 (541)
Q Consensus 113 ~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~ 152 (541)
...+++ +.+|++||-|-...|=..||...|.|.......
T Consensus 71 ~~~v~L-~~~G~~yFic~~~gHC~~GmKl~I~V~~~~s~~ 109 (109)
T 1ws8_A 71 ADSIPL-KRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSSA 109 (109)
T ss_dssp EEEEEC-CSSEEEEEECCSTTTTTTTCEEEEEECC-----
T ss_pred CEEEEE-CCCcCEEEECCCCCcccCCCEEEEEEcCCCCCC
No 158
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=26.90 E-value=1.6e+02 Score=26.91 Aligned_cols=62 Identities=16% Similarity=0.086 Sum_probs=44.4
Q ss_pred ccEEEecCCEEEEEEEEcCCCCeEEEEEcCceeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCCCCceeEEEEeccc
Q 009171 204 LSFTGQKGKTYKFRVSNVGIATSINFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHGPPKDYYIVASTRF 283 (541)
Q Consensus 204 p~l~v~~G~~~rlRliNa~~~~~~~~~i~~h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~g~~~i~~~~~~ 283 (541)
..+.++.|+.+|+++-.+.. .|.|.+.....++ ..-||..-.+-+.++ .+|.|...|+...
T Consensus 140 n~lvlP~~~~Vr~~vtS~DV--iHsf~vP~lg~K~----------------DaiPGr~n~~~~~~~-~~G~y~g~Cse~C 200 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSEDV--LHSWAVPSLGLKT----------------DAIPGRLNQTTLMSS-RPGLYYGQCSEIC 200 (227)
T ss_dssp SCEEEETTSCEEEEEEESSS--CEEEEEGGGTEEE----------------EECTTCCEEEEECCS-SCEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEeCcc--cceeeecccCcEE----------------EecCCceEEEEEecC-CcEEEEEEehhhc
Confidence 57899999999998887544 5566666543322 345677777777777 6999999998653
Q ss_pred c
Q 009171 284 T 284 (541)
Q Consensus 284 ~ 284 (541)
+
T Consensus 201 G 201 (227)
T 1v54_B 201 G 201 (227)
T ss_dssp S
T ss_pred c
Confidence 3
No 159
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=26.00 E-value=50 Score=27.29 Aligned_cols=64 Identities=19% Similarity=0.269 Sum_probs=35.4
Q ss_pred EEEEEECCCCCe---eEeeCCcCCCC---CCCCCCCCCCCCccCCCCeEEEEEEe--cCCceeeEEcCCchhhhhcceee
Q 009171 70 IVNLINKLDEPF---LITWNGVKQRR---TTWQDGVLGTNCPIPPNSNWTYKFQM--KDQIGTFNYFPSTKVHRAFGGFG 141 (541)
Q Consensus 70 ~v~~~N~l~~~~---~iH~HG~~~~~---~~~~DG~~~~q~~i~pG~~~~y~f~~--~~~~Gt~wYH~H~~~q~~~Gl~G 141 (541)
.|++.|....+. +=||.=....+ .-.-+||-|-|.-|.||++|.|.=-. +.+.|+ |.|
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg~~L~tp~G~--------------M~G 98 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGTALDTPVGV--------------MQG 98 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEEEEEESSSEEE--------------EEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeCCcCcCCCcEE--------------EEE
Confidence 466777765543 55774221110 01124443337779999988885332 345665 667
Q ss_pred EEEEec
Q 009171 142 AVNVAQ 147 (541)
Q Consensus 142 ~liV~~ 147 (541)
.+...+
T Consensus 99 ~y~m~~ 104 (126)
T 1xvs_A 99 QYLMID 104 (126)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 766654
No 160
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=25.96 E-value=65 Score=27.11 Aligned_cols=65 Identities=20% Similarity=0.265 Sum_probs=36.2
Q ss_pred EEEEEECCCCCe---eEeeCCcCCCC---CCCCCCCCCCCCccCCCCeEEEEEEe--cCCceeeEEcCCchhhhhcceee
Q 009171 70 IVNLINKLDEPF---LITWNGVKQRR---TTWQDGVLGTNCPIPPNSNWTYKFQM--KDQIGTFNYFPSTKVHRAFGGFG 141 (541)
Q Consensus 70 ~v~~~N~l~~~~---~iH~HG~~~~~---~~~~DG~~~~q~~i~pG~~~~y~f~~--~~~~Gt~wYH~H~~~q~~~Gl~G 141 (541)
.|++.|....+. +=||.=....+ .-.-+||-|-|.-|.||++|.|.=-. +.+.|+ |.|
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtSg~~L~Tp~G~--------------M~G 103 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTSGCPLPTPIGT--------------MRG 103 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEEEEEESSSEEE--------------EEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcCCcCcCCCceE--------------EEE
Confidence 466677765553 55674321111 01124443336779999988885332 345665 667
Q ss_pred EEEEecC
Q 009171 142 AVNVAQR 148 (541)
Q Consensus 142 ~liV~~~ 148 (541)
.+...+.
T Consensus 104 ~y~m~~~ 110 (139)
T 1xq4_A 104 TYHCVGE 110 (139)
T ss_dssp EEEEEET
T ss_pred EEEEEeC
Confidence 7766653
No 161
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=25.32 E-value=2.8e+02 Score=22.77 Aligned_cols=64 Identities=9% Similarity=0.180 Sum_probs=35.4
Q ss_pred CceEEEecCCEEEEEEEECCCCCeeEeeCCcCCCCCCCCCCC--------CCCCCccCCCCeEEEEEEecCCcee
Q 009171 58 GPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGV--------LGTNCPIPPNSNWTYKFQMKDQIGT 124 (541)
Q Consensus 58 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~--------~~~q~~i~pG~~~~y~f~~~~~~Gt 124 (541)
|-+|.++.||++.|.|.-+-..+.+=..-.. .+..-.|++ |.-...+..|+...+.|++ .++|+
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~--~~~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A-~~~G~ 103 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGG--TKESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTV-KAAGT 103 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTT--BSSCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEE-CSSEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecC--CCccccccceeecceeeeCCCCCcCCCcEEEEEEEE-ccCce
Confidence 5689999999999999866433332222211 100112221 1001134556778888885 56775
No 162
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=24.03 E-value=2.3e+02 Score=27.62 Aligned_cols=69 Identities=16% Similarity=0.172 Sum_probs=43.0
Q ss_pred CEEEEEEEEcCCCCeEEEE---Ec---CceeEEEeecCcccc----------eeeeeEEEEcCCceEEEEEEeCC-----
Q 009171 212 KTYKFRVSNVGIATSINFR---IQ---GHTLTLVEVEGAHCL----------QESYESIDIHVGQSVAVVVAMHG----- 270 (541)
Q Consensus 212 ~~~rlRliNa~~~~~~~~~---i~---~h~~~via~DG~~~~----------p~~~d~v~l~pgeR~dv~v~~~~----- 270 (541)
-++..-|-|.|....--|. +| -..|.| ..||..++ |..-+-+.|+|||.+++.|++..
T Consensus 38 ~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs 116 (343)
T 2x3c_A 38 VRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMS 116 (343)
T ss_dssp CEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCC
T ss_pred eEEEEEEEeCCCCceEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccC
Confidence 3455566666654421111 12 223455 46776652 22246899999999999999864
Q ss_pred CCceeEEEEec
Q 009171 271 PPKDYYIVAST 281 (541)
Q Consensus 271 ~~g~~~i~~~~ 281 (541)
.+|.|.++...
T Consensus 117 ~gG~y~v~~~g 127 (343)
T 2x3c_A 117 AQGQYSIRYQL 127 (343)
T ss_dssp SCEEEEEEEC-
T ss_pred CCceEEEEEee
Confidence 47899998864
No 163
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=23.60 E-value=66 Score=31.14 Aligned_cols=77 Identities=13% Similarity=0.143 Sum_probs=52.3
Q ss_pred EEecCCCcEEEEEEEcCCCCCCceeecCCceEEEEecccccCccccccCcCCCCCccceEEeCCCCEEEEEEEcCCccee
Q 009171 415 VIPTTLHDYVEIVFQNNETSVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYVSLDNKGVW 494 (541)
Q Consensus 415 ~~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w 494 (541)
.+.++.|+.|++.+.+.+ ..|.|.+= +-+. ..| +-||....+.|.++.||.|
T Consensus 152 ~l~lP~g~~V~~~lTS~D-ViHsf~IP-------~lg~-----------------k~D---aiPGr~n~~~~~~~~~G~y 203 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNS-VMNSFFIP-------RLGS-----------------QIY---AMAGMQTRLHLIANEPGTY 203 (315)
T ss_dssp BCCCCSSSEEEEEECBSS-SCEEEEEG-------GGTE-----------------EEE---ECBTSCEEEEEECCSCBCC
T ss_pred eEEEeCCCEEEEEEEeCC-ccceeeec-------ccCc-----------------EEe---ecCCcceeeEEecCCCeEE
Confidence 467889999999888664 45554443 2211 122 3356777889999999999
Q ss_pred EEeechhhH-hhcccEEEEEEe-cCCc
Q 009171 495 NLRSAIWER-RYLGQELYLRVS-NDER 519 (541)
Q Consensus 495 ~~HCHil~H-~d~GMm~~~~V~-~~~~ 519 (541)
...|--.-- -|..|-..++|+ .+++
T Consensus 204 ~g~CsE~CG~~Hs~M~~~v~vv~~~~~ 230 (315)
T 1fft_B 204 DGISASYSGPGFSGMKFKAIATPDRAA 230 (315)
T ss_dssp EEBCCSCCSTTTTTCCEECCBCSSTHH
T ss_pred EEeccccchhhHHhccceEEEecCHHH
Confidence 999987643 355677777777 5544
No 164
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=22.43 E-value=58 Score=25.32 Aligned_cols=68 Identities=16% Similarity=0.130 Sum_probs=37.1
Q ss_pred EecCCEEEEEEEEcCCCCeEEEEEcCc--eeEEEeecCcccceeeeeEEEEcCCceEEEEEEeCC--CCceeEEEEec
Q 009171 208 GQKGKTYKFRVSNVGIATSINFRIQGH--TLTLVEVEGAHCLQESYESIDIHVGQSVAVVVAMHG--PPKDYYIVAST 281 (541)
Q Consensus 208 v~~G~~~rlRliNa~~~~~~~~~i~~h--~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~--~~g~~~i~~~~ 281 (541)
-+||+++++|++--..... . ..+- .+++...+|..+... .........++..+.++. ..|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~~-p--~~~~~~~v~l~dp~g~~v~~~---~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFH-P--LNELIPLVYIQDPKGNRIAQW---QSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGGC-B--CCCEEEEEEEECTTSCEEEEE---EEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCCc-C--CCCCceEEEEECCCCCEEEEE---EeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 4799999999875432211 0 1111 345555555433211 122233456666677654 35899998874
No 165
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=21.30 E-value=58 Score=27.22 Aligned_cols=65 Identities=20% Similarity=0.377 Sum_probs=35.6
Q ss_pred EEEEEECCCCCe---eEeeCCcCCCC---CCCCCCCCCCCCccCCCCeEEEEEEe--cCCceeeEEcCCchhhhhcceee
Q 009171 70 IVNLINKLDEPF---LITWNGVKQRR---TTWQDGVLGTNCPIPPNSNWTYKFQM--KDQIGTFNYFPSTKVHRAFGGFG 141 (541)
Q Consensus 70 ~v~~~N~l~~~~---~iH~HG~~~~~---~~~~DG~~~~q~~i~pG~~~~y~f~~--~~~~Gt~wYH~H~~~q~~~Gl~G 141 (541)
.|++.|....+. +=||.=....+ .-.-+||-|-|.-|.||++|.|.=-. +.+.|+ |.|
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtSg~~L~Tp~G~--------------M~G 98 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSGTVLDTPFGI--------------MYG 98 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEEEEEESSSEEE--------------EEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcCCcCcCCCceE--------------EEE
Confidence 466677765543 45664221110 01124443337779999988885332 345665 667
Q ss_pred EEEEecC
Q 009171 142 AVNVAQR 148 (541)
Q Consensus 142 ~liV~~~ 148 (541)
.+.....
T Consensus 99 ~y~m~~~ 105 (134)
T 1tza_A 99 TYGMVSE 105 (134)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 6666553
No 166
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=20.73 E-value=34 Score=28.39 Aligned_cols=17 Identities=6% Similarity=0.104 Sum_probs=15.9
Q ss_pred eEEEecCCEEEEEEEEC
Q 009171 60 AIEAVTNDNIIVNLINK 76 (541)
Q Consensus 60 ~i~v~~Gd~v~v~~~N~ 76 (541)
-|.|+.|++|++.+.|.
T Consensus 72 ~InV~~GETVrF~v~nk 88 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEK 88 (131)
T ss_dssp EEEEETTCEEEEEETTE
T ss_pred EEEecCCCEEEEEeCCc
Confidence 49999999999999998
No 167
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=20.43 E-value=38 Score=28.12 Aligned_cols=21 Identities=24% Similarity=0.246 Sum_probs=17.2
Q ss_pred ccEEEecCCEEEEEEEEcCCC
Q 009171 204 LSFTGQKGKTYKFRVSNVGIA 224 (541)
Q Consensus 204 p~l~v~~G~~~rlRliNa~~~ 224 (541)
-.++|++||++||.+.|-+..
T Consensus 71 k~InV~~GETVrF~v~nkt~~ 91 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIVA 91 (131)
T ss_dssp CEEEEETTCEEEEEETTEEEE
T ss_pred eEEEecCCCEEEEEeCCcEEE
Confidence 469999999999998886543
No 168
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=20.13 E-value=2e+02 Score=28.51 Aligned_cols=51 Identities=18% Similarity=0.280 Sum_probs=0.0
Q ss_pred EEEEEEEECCCCCe--------eEeeCCcCCCCCC--CCC------CCCCC-CCccCCCCeEEEEEEecC
Q 009171 68 NIIVNLINKLDEPF--------LITWNGVKQRRTT--WQD------GVLGT-NCPIPPNSNWTYKFQMKD 120 (541)
Q Consensus 68 ~v~v~~~N~l~~~~--------~iH~HG~~~~~~~--~~D------G~~~~-q~~i~pG~~~~y~f~~~~ 120 (541)
++.++++|+.+++. +++|-.-.+.... ..| |.- . . ||+|||+.+.+.++.+
T Consensus 301 ~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 301 TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEEEC
T ss_pred EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEeeh
Done!