Query 009172
Match_columns 541
No_of_seqs 538 out of 3558
Neff 7.4
Searched_HMMs 46136
Date Thu Mar 28 21:17:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009172.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009172hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0626 MetC Cystathionine bet 100.0 3.7E-80 8.1E-85 642.3 41.3 387 152-541 7-395 (396)
2 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 5.3E-77 1.2E-81 625.4 41.6 383 154-539 1-386 (386)
3 COG2873 MET17 O-acetylhomoseri 100.0 1.6E-77 3.4E-82 597.8 35.1 386 152-541 7-426 (426)
4 PRK08114 cystathionine beta-ly 100.0 8.5E-73 1.8E-77 594.7 41.7 383 152-541 5-394 (395)
5 PRK08861 cystathionine gamma-s 100.0 5.7E-72 1.2E-76 589.9 41.9 379 152-541 5-384 (388)
6 PRK06702 O-acetylhomoserine am 100.0 1.8E-71 3.8E-76 591.0 42.0 383 153-539 7-423 (432)
7 KOG0053 Cystathionine beta-lya 100.0 6.1E-72 1.3E-76 573.6 35.4 388 149-541 18-407 (409)
8 PRK09028 cystathionine beta-ly 100.0 4.8E-71 1E-75 582.7 42.1 382 152-540 4-387 (394)
9 PRK08249 cystathionine gamma-s 100.0 2.3E-70 4.9E-75 580.9 43.9 386 152-540 8-393 (398)
10 PRK05967 cystathionine beta-ly 100.0 2.8E-70 6.2E-75 576.1 41.9 377 152-541 12-392 (395)
11 PRK08248 O-acetylhomoserine am 100.0 2.1E-69 4.6E-74 578.1 42.6 386 153-541 9-428 (431)
12 PRK08045 cystathionine gamma-s 100.0 5.6E-69 1.2E-73 568.1 42.9 380 151-541 3-383 (386)
13 PRK05613 O-acetylhomoserine am 100.0 4.8E-69 1E-73 575.1 42.1 386 153-541 14-437 (437)
14 TIGR01328 met_gam_lyase methio 100.0 8.7E-69 1.9E-73 568.1 43.2 386 153-541 4-391 (391)
15 PRK07812 O-acetylhomoserine am 100.0 8.4E-69 1.8E-73 573.1 43.2 385 153-540 14-431 (436)
16 PRK08134 O-acetylhomoserine am 100.0 2.6E-68 5.5E-73 569.7 43.3 386 152-540 8-427 (433)
17 PRK06084 O-acetylhomoserine am 100.0 3.1E-68 6.8E-73 568.5 42.7 385 153-540 3-422 (425)
18 PRK07810 O-succinylhomoserine 100.0 4.8E-68 1E-72 564.0 43.5 383 152-538 15-402 (403)
19 TIGR02080 O_succ_thio_ly O-suc 100.0 2.1E-67 4.4E-72 555.7 42.9 378 152-540 3-381 (382)
20 PRK08133 O-succinylhomoserine 100.0 2.7E-67 5.9E-72 556.7 43.3 384 153-540 7-390 (390)
21 PRK07049 methionine gamma-lyas 100.0 3.4E-67 7.3E-72 561.2 43.4 386 153-540 18-426 (427)
22 PRK07504 O-succinylhomoserine 100.0 4.1E-67 8.9E-72 556.5 43.6 385 153-541 11-396 (398)
23 PRK08574 cystathionine gamma-s 100.0 3.3E-67 7.1E-72 554.7 42.0 380 153-541 3-385 (385)
24 PRK05939 hypothetical protein; 100.0 3.9E-67 8.4E-72 555.8 42.3 370 168-540 5-396 (397)
25 PRK06176 cystathionine gamma-s 100.0 5.9E-67 1.3E-71 551.9 42.3 376 153-541 3-379 (380)
26 PRK07503 methionine gamma-lyas 100.0 7.4E-67 1.6E-71 555.4 42.9 385 153-540 10-396 (403)
27 TIGR01324 cysta_beta_ly_B cyst 100.0 1.4E-66 3.1E-71 547.9 43.7 375 155-541 1-377 (377)
28 PRK08776 cystathionine gamma-s 100.0 1.5E-66 3.2E-71 552.7 43.6 378 152-540 12-390 (405)
29 TIGR01325 O_suc_HS_sulf O-succ 100.0 2.5E-66 5.4E-71 547.8 42.4 380 154-538 1-380 (380)
30 PRK05994 O-acetylhomoserine am 100.0 3.3E-66 7.2E-71 553.8 43.6 386 152-540 7-426 (427)
31 PRK06234 methionine gamma-lyas 100.0 5.7E-66 1.2E-70 548.3 43.6 386 153-541 9-398 (400)
32 PRK07671 cystathionine beta-ly 100.0 7.5E-66 1.6E-70 543.2 43.1 374 153-539 3-377 (377)
33 PRK06767 methionine gamma-lyas 100.0 9E-66 2E-70 544.6 42.5 381 152-541 5-386 (386)
34 PLN02509 cystathionine beta-ly 100.0 1E-65 2.2E-70 551.3 42.2 374 153-540 87-461 (464)
35 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 2E-65 4.4E-70 547.0 42.2 384 153-539 2-418 (418)
36 PRK06434 cystathionine gamma-l 100.0 1.9E-65 4E-70 539.0 40.5 377 151-540 7-384 (384)
37 PRK06460 hypothetical protein; 100.0 3.9E-65 8.5E-70 537.7 43.0 374 152-541 2-375 (376)
38 cd00614 CGS_like CGS_like: Cys 100.0 6.6E-65 1.4E-69 535.2 41.7 368 171-539 1-369 (369)
39 TIGR01329 cysta_beta_ly_E cyst 100.0 8.7E-65 1.9E-69 535.4 42.3 374 154-541 2-376 (378)
40 PRK07811 cystathionine gamma-s 100.0 1.1E-64 2.3E-69 536.5 42.6 375 153-540 13-388 (388)
41 PRK07050 cystathionine beta-ly 100.0 3.3E-64 7.1E-69 533.4 41.4 380 152-540 9-391 (394)
42 PRK08064 cystathionine beta-ly 100.0 3E-63 6.4E-68 525.8 42.5 376 153-541 7-383 (390)
43 PLN02242 methionine gamma-lyas 100.0 6.5E-63 1.4E-67 526.5 42.1 382 152-540 17-415 (418)
44 PRK07269 cystathionine gamma-s 100.0 1.2E-61 2.7E-66 508.4 39.9 357 152-539 6-363 (364)
45 PRK05968 hypothetical protein; 100.0 3.1E-60 6.6E-65 502.6 41.2 373 156-540 12-386 (389)
46 PRK07582 cystathionine gamma-l 100.0 3.5E-60 7.5E-65 498.5 39.4 363 152-541 3-366 (366)
47 PRK08247 cystathionine gamma-s 100.0 1.1E-58 2.3E-63 487.4 41.0 361 151-540 3-364 (366)
48 COG1104 NifS Cysteine sulfinat 100.0 1.9E-30 4.1E-35 266.9 25.0 318 194-540 28-373 (386)
49 COG0520 csdA Selenocysteine ly 100.0 1.1E-26 2.4E-31 246.3 30.5 306 200-540 56-401 (405)
50 PRK10874 cysteine sulfinate de 100.0 3.8E-26 8.2E-31 243.1 29.9 295 208-540 61-394 (401)
51 PRK09295 bifunctional cysteine 99.9 7.5E-26 1.6E-30 241.3 29.1 297 207-540 64-400 (406)
52 TIGR03392 FeS_syn_CsdA cystein 99.9 1.8E-25 3.9E-30 237.6 30.2 293 210-540 60-391 (398)
53 COG0436 Aspartate/tyrosine/aro 99.9 7.1E-25 1.5E-29 232.3 31.6 274 208-526 63-375 (393)
54 PRK05957 aspartate aminotransf 99.9 1.5E-24 3.2E-29 230.2 32.5 286 210-539 69-384 (389)
55 PLN02855 Bifunctional selenocy 99.9 1.2E-24 2.6E-29 233.4 31.3 299 210-540 76-414 (424)
56 PLN03227 serine palmitoyltrans 99.9 1.1E-24 2.4E-29 231.3 30.7 299 204-539 39-377 (392)
57 PRK06207 aspartate aminotransf 99.9 1.5E-24 3.2E-29 231.4 31.5 284 212-539 84-401 (405)
58 COG0079 HisC Histidinol-phosph 99.9 7.7E-25 1.7E-29 228.6 28.0 289 203-539 50-353 (356)
59 TIGR01979 sufS cysteine desulf 99.9 1.5E-24 3.2E-29 230.8 30.0 299 208-540 60-397 (403)
60 cd06453 SufS_like Cysteine des 99.9 1.3E-24 2.8E-29 228.7 29.2 293 210-538 43-373 (373)
61 PRK07324 transaminase; Validat 99.9 2.2E-24 4.9E-29 227.6 31.0 282 201-532 55-359 (373)
62 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2.6E-24 5.5E-29 226.9 30.0 282 209-540 50-368 (370)
63 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 3.6E-24 7.8E-29 224.8 30.5 223 203-431 37-284 (361)
64 PRK14807 histidinol-phosphate 99.9 4.6E-24 9.9E-29 223.3 31.1 283 204-537 53-349 (351)
65 PRK07179 hypothetical protein; 99.9 7.3E-24 1.6E-28 226.1 32.5 283 208-539 97-393 (407)
66 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 6.9E-24 1.5E-28 225.0 31.8 225 201-431 54-303 (387)
67 PLN02651 cysteine desulfurase 99.9 2.2E-24 4.7E-29 226.8 27.6 300 204-532 37-364 (364)
68 PLN03026 histidinol-phosphate 99.9 4E-24 8.7E-29 226.3 29.6 280 205-535 81-377 (380)
69 TIGR01977 am_tr_V_EF2568 cyste 99.9 9.1E-24 2E-28 222.3 31.8 301 210-541 44-376 (376)
70 PLN02721 threonine aldolase 99.9 6.3E-24 1.4E-28 221.3 30.3 284 207-538 37-346 (353)
71 TIGR03403 nifS_epsilon cystein 99.9 3.7E-24 7.9E-29 226.4 28.8 312 200-540 32-371 (382)
72 PRK07681 aspartate aminotransf 99.9 9E-24 1.9E-28 224.9 31.7 269 210-524 69-370 (399)
73 TIGR01822 2am3keto_CoA 2-amino 99.9 2.2E-23 4.8E-28 220.9 34.2 284 209-539 82-384 (393)
74 TIGR03402 FeS_nifS cysteine de 99.9 3.4E-24 7.4E-29 226.3 27.1 301 209-540 41-368 (379)
75 PRK06225 aspartate aminotransf 99.9 1.9E-23 4.2E-28 220.8 32.9 294 204-540 59-376 (380)
76 PRK06290 aspartate aminotransf 99.9 1.2E-23 2.6E-28 224.7 31.5 286 206-540 77-405 (410)
77 cd06454 KBL_like KBL_like; thi 99.9 2.3E-23 5E-28 216.6 32.4 286 208-540 44-347 (349)
78 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.5E-23 3.1E-28 222.6 30.6 295 210-538 60-397 (397)
79 PRK02948 cysteine desulfurase; 99.9 8.8E-24 1.9E-28 223.3 28.8 312 201-540 34-370 (381)
80 TIGR00474 selA seryl-tRNA(sec) 99.9 1.4E-24 3.1E-29 232.9 22.6 212 210-427 122-371 (454)
81 PRK04870 histidinol-phosphate 99.9 1E-23 2.3E-28 220.8 28.7 281 204-535 57-353 (356)
82 PRK04781 histidinol-phosphate 99.9 1.4E-23 3.1E-28 220.8 29.3 285 204-538 53-361 (364)
83 PRK06425 histidinol-phosphate 99.9 9.2E-24 2E-28 219.4 27.0 279 204-538 34-331 (332)
84 PRK08960 hypothetical protein; 99.9 5.2E-23 1.1E-27 218.1 32.9 284 209-536 68-380 (387)
85 TIGR03540 DapC_direct LL-diami 99.9 4.6E-23 1E-27 218.0 32.2 284 204-534 60-377 (383)
86 PRK15481 transcriptional regul 99.9 1.7E-23 3.7E-28 225.0 29.1 286 206-539 116-430 (431)
87 PRK05764 aspartate aminotransf 99.9 6.5E-23 1.4E-27 217.5 32.9 284 210-539 68-390 (393)
88 PRK06108 aspartate aminotransf 99.9 9.5E-23 2.1E-27 215.2 33.5 275 211-531 62-370 (382)
89 PRK01688 histidinol-phosphate 99.9 6.9E-24 1.5E-28 222.0 24.6 280 204-538 51-350 (351)
90 PRK08361 aspartate aminotransf 99.9 2.5E-23 5.4E-28 220.8 29.1 288 208-539 68-389 (391)
91 PRK07682 hypothetical protein; 99.9 1.9E-23 4.2E-28 220.6 28.0 286 209-539 56-375 (378)
92 TIGR03537 DapC succinyldiamino 99.9 6E-23 1.3E-27 214.7 31.1 281 205-532 30-342 (350)
93 PRK02731 histidinol-phosphate 99.9 9.5E-24 2.1E-28 221.8 25.2 285 204-539 61-365 (367)
94 PRK06348 aspartate aminotransf 99.9 6.4E-23 1.4E-27 217.2 31.2 286 205-535 60-377 (384)
95 TIGR02006 IscS cysteine desulf 99.9 1.3E-23 2.8E-28 223.9 25.6 300 208-540 45-373 (402)
96 TIGR01141 hisC histidinol-phos 99.9 2.5E-23 5.5E-28 216.8 27.3 280 205-538 49-345 (346)
97 PRK05942 aspartate aminotransf 99.9 6.9E-23 1.5E-27 217.7 31.1 285 206-537 68-386 (394)
98 PRK09276 LL-diaminopimelate am 99.9 7.1E-23 1.5E-27 216.8 31.0 283 205-534 63-379 (385)
99 TIGR00858 bioF 8-amino-7-oxono 99.9 1.5E-22 3.2E-27 211.1 32.7 282 209-538 60-359 (360)
100 PRK12414 putative aminotransfe 99.9 2.2E-22 4.9E-27 213.1 34.1 280 211-534 71-378 (384)
101 PLN02187 rooty/superroot1 99.9 1.7E-22 3.7E-27 218.9 33.8 286 209-539 107-437 (462)
102 PRK04311 selenocysteine syntha 99.9 1.4E-23 3.1E-28 225.8 25.0 213 210-428 127-377 (464)
103 PRK03158 histidinol-phosphate 99.9 2.9E-23 6.2E-28 217.6 26.8 279 205-536 59-357 (359)
104 PRK00950 histidinol-phosphate 99.9 2.5E-23 5.5E-28 218.0 26.3 284 205-538 64-360 (361)
105 PLN02483 serine palmitoyltrans 99.9 2.4E-22 5.1E-27 219.0 34.7 283 209-538 145-460 (489)
106 PRK02610 histidinol-phosphate 99.9 5.1E-23 1.1E-27 217.3 28.6 282 205-540 61-371 (374)
107 cd06502 TA_like Low-specificit 99.9 8.9E-23 1.9E-27 211.4 29.9 283 208-540 30-337 (338)
108 PTZ00433 tyrosine aminotransfe 99.9 1.2E-22 2.7E-27 217.1 31.6 287 205-538 69-406 (412)
109 PRK08068 transaminase; Reviewe 99.9 1.3E-22 2.8E-27 215.2 31.5 284 204-534 63-380 (389)
110 PRK07366 succinyldiaminopimela 99.9 1.1E-22 2.4E-27 215.5 30.6 277 210-532 68-379 (388)
111 PRK07337 aminotransferase; Val 99.9 1.2E-22 2.6E-27 215.3 30.8 281 211-535 68-381 (388)
112 PRK05958 8-amino-7-oxononanoat 99.9 3.1E-22 6.7E-27 210.9 33.5 287 206-540 80-383 (385)
113 PRK09147 succinyldiaminopimela 99.9 9.2E-23 2E-27 216.9 29.7 277 206-525 60-379 (396)
114 PLN00145 tyrosine/nicotianamin 99.9 1.9E-22 4E-27 216.9 32.3 282 206-534 89-415 (430)
115 PRK07550 hypothetical protein; 99.9 1.2E-22 2.6E-27 215.1 29.9 275 210-529 67-373 (386)
116 PRK04635 histidinol-phosphate 99.9 4E-23 8.7E-28 216.4 25.2 249 204-484 54-321 (354)
117 PRK13392 5-aminolevulinate syn 99.9 2.4E-22 5.3E-27 214.6 31.5 282 210-539 91-392 (410)
118 PLN02656 tyrosine transaminase 99.9 2.8E-22 6.2E-27 214.1 32.0 278 210-534 73-394 (409)
119 TIGR01140 L_thr_O3P_dcar L-thr 99.9 7.8E-23 1.7E-27 212.3 26.8 277 203-538 40-329 (330)
120 PRK08153 histidinol-phosphate 99.9 1.1E-22 2.4E-27 214.4 28.3 285 206-539 63-364 (369)
121 PRK01533 histidinol-phosphate 99.9 3E-23 6.6E-28 218.5 23.5 275 205-539 59-354 (366)
122 PLN00143 tyrosine/nicotianamin 99.9 3.3E-22 7.1E-27 213.7 31.7 283 210-538 74-402 (409)
123 PRK05387 histidinol-phosphate 99.9 1.4E-22 3.1E-27 211.7 28.3 281 205-539 55-352 (353)
124 TIGR01264 tyr_amTase_E tyrosin 99.9 3E-22 6.5E-27 213.3 31.0 286 208-540 71-399 (401)
125 PF00266 Aminotran_5: Aminotra 99.9 1.5E-22 3.2E-27 213.3 28.0 298 202-534 35-371 (371)
126 TIGR01265 tyr_nico_aTase tyros 99.9 6.2E-22 1.3E-26 211.1 32.9 270 209-525 72-384 (403)
127 cd06451 AGAT_like Alanine-glyo 99.9 3.4E-22 7.3E-27 209.0 30.2 288 210-540 32-353 (356)
128 COG1168 MalY Bifunctional PLP- 99.9 1.3E-21 2.9E-26 198.2 33.1 313 183-540 35-386 (388)
129 PRK07309 aromatic amino acid a 99.9 5E-22 1.1E-26 211.0 31.3 285 211-539 68-387 (391)
130 TIGR03538 DapC_gpp succinyldia 99.9 3.4E-22 7.4E-27 212.3 29.5 284 205-532 58-384 (393)
131 cd00616 AHBA_syn 3-amino-5-hyd 99.9 3.4E-22 7.5E-27 208.2 28.8 304 207-539 15-352 (352)
132 PLN00175 aminotransferase fami 99.9 1.7E-21 3.7E-26 208.4 34.7 272 211-524 92-395 (413)
133 PRK08056 threonine-phosphate d 99.9 2.8E-22 6.1E-27 210.2 27.9 282 206-539 51-354 (356)
134 PRK08912 hypothetical protein; 99.9 7.3E-22 1.6E-26 209.2 31.4 291 205-538 57-384 (387)
135 PRK05166 histidinol-phosphate 99.9 2.2E-22 4.8E-27 212.2 27.0 281 205-538 66-369 (371)
136 PRK09148 aminotransferase; Val 99.9 8.5E-22 1.9E-26 210.2 30.8 285 205-535 62-382 (405)
137 TIGR01821 5aminolev_synth 5-am 99.9 1.2E-21 2.5E-26 208.8 31.8 284 208-539 88-391 (402)
138 PRK09265 aminotransferase AlaT 99.9 1.4E-21 3E-26 208.4 32.4 289 206-539 67-400 (404)
139 PRK09105 putative aminotransfe 99.9 4.6E-22 1E-26 209.8 28.3 278 205-538 73-368 (370)
140 PRK03321 putative aminotransfe 99.9 1.7E-22 3.6E-27 211.3 24.2 279 205-540 52-351 (352)
141 PRK07568 aspartate aminotransf 99.9 1.1E-21 2.5E-26 208.2 30.9 286 210-539 66-391 (397)
142 PRK13355 bifunctional HTH-doma 99.9 1.6E-21 3.4E-26 214.5 32.7 287 206-538 180-512 (517)
143 TIGR01437 selA_rel uncharacter 99.9 5.3E-22 1.2E-26 208.8 27.7 295 208-541 43-362 (363)
144 PRK07777 aminotransferase; Val 99.9 2.6E-21 5.7E-26 205.0 33.2 282 210-534 61-377 (387)
145 PRK07683 aminotransferase A; V 99.9 3.2E-21 6.9E-26 204.5 33.7 276 209-530 64-370 (387)
146 PRK09082 methionine aminotrans 99.9 1.2E-21 2.5E-26 207.8 30.3 275 212-530 73-376 (386)
147 PRK13393 5-aminolevulinate syn 99.9 1.9E-21 4E-26 207.6 32.0 283 209-539 89-391 (406)
148 PRK06939 2-amino-3-ketobutyrat 99.9 3.1E-21 6.7E-26 204.3 32.9 284 209-539 86-392 (397)
149 PRK14012 cysteine desulfurase; 99.9 2.9E-22 6.3E-27 213.6 25.1 300 209-540 48-375 (404)
150 PRK08363 alanine aminotransfer 99.9 2.6E-21 5.6E-26 205.9 32.2 287 209-539 69-393 (398)
151 PRK05664 threonine-phosphate d 99.9 1.5E-21 3.2E-26 202.8 28.9 269 206-538 46-326 (330)
152 PLN02450 1-aminocyclopropane-1 99.9 1.5E-21 3.2E-26 211.9 30.2 290 205-539 80-429 (468)
153 COG1167 ARO8 Transcriptional r 99.9 2.1E-21 4.6E-26 210.0 31.3 284 210-536 132-448 (459)
154 PRK03967 histidinol-phosphate 99.9 8.2E-22 1.8E-26 205.2 26.5 271 203-539 48-333 (337)
155 PRK08175 aminotransferase; Val 99.9 1.6E-21 3.5E-26 207.3 29.2 278 211-533 68-379 (395)
156 TIGR03235 DNA_S_dndA cysteine 99.9 6.3E-22 1.4E-26 207.0 25.6 283 209-522 41-353 (353)
157 PRK09064 5-aminolevulinate syn 99.9 3.4E-21 7.4E-26 205.5 31.6 284 208-539 89-392 (407)
158 PRK14809 histidinol-phosphate 99.9 1.2E-21 2.7E-26 205.3 27.7 275 206-538 61-355 (357)
159 PRK06358 threonine-phosphate d 99.9 2E-21 4.4E-26 203.7 29.3 281 204-538 48-353 (354)
160 PRK03317 histidinol-phosphate 99.9 8.7E-22 1.9E-26 207.3 26.4 280 204-539 59-363 (368)
161 TIGR01825 gly_Cac_T_rel pyrido 99.9 7E-21 1.5E-25 201.2 33.2 253 204-484 72-341 (385)
162 PRK06107 aspartate aminotransf 99.9 8.5E-21 1.8E-25 202.3 33.7 283 212-540 76-400 (402)
163 TIGR03539 DapC_actino succinyl 99.9 2.6E-21 5.7E-26 202.9 28.9 268 205-525 50-345 (357)
164 PRK08636 aspartate aminotransf 99.9 5.4E-21 1.2E-25 203.9 31.4 277 211-532 72-389 (403)
165 PTZ00377 alanine aminotransfer 99.9 5E-21 1.1E-25 208.7 31.6 286 211-539 116-474 (481)
166 PF00155 Aminotran_1_2: Aminot 99.9 1.7E-21 3.7E-26 203.9 26.8 276 204-529 37-355 (363)
167 TIGR03576 pyridox_MJ0158 pyrid 99.9 6.3E-21 1.4E-25 199.2 30.7 272 208-538 52-345 (346)
168 COG0156 BioF 7-keto-8-aminopel 99.9 6.3E-21 1.4E-25 199.5 30.4 286 208-541 82-387 (388)
169 PRK07865 N-succinyldiaminopime 99.9 3.1E-21 6.7E-26 202.8 28.3 266 206-524 57-350 (364)
170 PRK10534 L-threonine aldolase; 99.9 6E-21 1.3E-25 197.9 30.1 253 205-485 28-303 (333)
171 PRK07392 threonine-phosphate d 99.9 4E-21 8.7E-26 201.7 28.9 282 205-539 52-358 (360)
172 KOG1549 Cysteine desulfurase N 99.9 6.8E-22 1.5E-26 204.5 21.7 175 194-374 70-257 (428)
173 cd00609 AAT_like Aspartate ami 99.9 1.1E-20 2.3E-25 195.3 30.6 289 204-539 30-349 (350)
174 PLN02822 serine palmitoyltrans 99.9 1.1E-20 2.3E-25 205.7 31.7 289 208-539 152-472 (481)
175 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.3E-20 2.8E-25 199.3 31.2 304 209-540 28-378 (380)
176 PRK11658 UDP-4-amino-4-deoxy-L 99.9 8.1E-21 1.8E-25 201.0 29.1 210 208-428 31-275 (379)
177 PRK06836 aspartate aminotransf 99.9 1.5E-20 3.3E-25 199.8 31.0 280 209-539 72-390 (394)
178 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.6E-20 3.5E-25 198.4 30.7 257 209-485 30-319 (376)
179 PRK06959 putative threonine-ph 99.9 4.7E-21 1E-25 199.8 26.3 271 204-540 48-333 (339)
180 PRK05839 hypothetical protein; 99.9 1.4E-20 2.9E-25 198.9 28.9 273 204-530 53-361 (374)
181 PRK07908 hypothetical protein; 99.9 1.4E-20 3.1E-25 196.6 28.5 276 205-539 52-346 (349)
182 PRK00854 rocD ornithine--oxo-a 99.9 3.3E-20 7E-25 197.6 31.0 256 207-483 80-367 (401)
183 PLN02376 1-aminocyclopropane-1 99.9 2.9E-20 6.4E-25 202.9 30.8 282 212-538 96-436 (496)
184 PRK14808 histidinol-phosphate 99.9 8.4E-21 1.8E-25 197.6 25.1 267 204-535 50-332 (335)
185 COG0399 WecE Predicted pyridox 99.9 1.5E-20 3.3E-25 195.2 26.7 210 209-429 33-270 (374)
186 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 6.1E-20 1.3E-24 194.0 31.7 257 209-485 30-318 (375)
187 PRK13034 serine hydroxymethylt 99.9 3.7E-20 8.1E-25 198.2 30.1 220 200-427 58-305 (416)
188 PRK09440 avtA valine--pyruvate 99.9 1.7E-20 3.7E-25 200.6 27.2 299 206-539 69-410 (416)
189 TIGR02326 transamin_PhnW 2-ami 99.9 5.2E-20 1.1E-24 193.3 30.3 258 210-486 35-328 (363)
190 PF01041 DegT_DnrJ_EryC1: DegT 99.9 1.4E-20 3E-25 198.1 25.3 304 209-538 24-362 (363)
191 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.1E-19 2.3E-24 189.4 31.6 288 210-540 31-353 (355)
192 PLN02409 serine--glyoxylate am 99.9 6.1E-20 1.3E-24 195.7 30.3 170 209-382 41-224 (401)
193 PRK07590 L,L-diaminopimelate a 99.9 4.3E-20 9.4E-25 197.3 29.2 255 208-487 74-377 (409)
194 PRK05937 8-amino-7-oxononanoat 99.9 7E-20 1.5E-24 193.2 30.1 278 208-540 54-346 (370)
195 PRK13479 2-aminoethylphosphona 99.9 6.6E-20 1.4E-24 192.8 29.7 258 210-486 37-329 (368)
196 PRK06855 aminotransferase; Val 99.9 9.5E-20 2.1E-24 196.1 31.5 214 210-429 73-327 (433)
197 KOG0257 Kynurenine aminotransf 99.9 1.4E-20 3E-25 192.6 23.2 222 200-427 61-326 (420)
198 PLN02607 1-aminocyclopropane-1 99.9 7.5E-20 1.6E-24 197.4 30.2 284 211-539 96-436 (447)
199 PLN02955 8-amino-7-oxononanoat 99.9 1.3E-19 2.9E-24 193.7 31.5 280 210-540 147-457 (476)
200 TIGR03542 DAPAT_plant LL-diami 99.9 9.3E-20 2E-24 194.3 30.1 279 208-533 73-394 (402)
201 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.5E-19 3.3E-24 190.0 31.1 279 209-541 58-373 (373)
202 cd00613 GDC-P Glycine cleavage 99.9 1.6E-19 3.5E-24 191.6 31.1 286 210-538 64-398 (398)
203 PRK08354 putative aminotransfe 99.9 7.8E-20 1.7E-24 188.3 27.7 160 211-384 41-205 (311)
204 cd00378 SHMT Serine-glycine hy 99.9 9.4E-20 2E-24 193.9 29.1 255 208-485 59-339 (402)
205 PRK13520 L-tyrosine decarboxyl 99.9 1.1E-19 2.5E-24 190.7 28.9 276 211-540 60-367 (371)
206 KOG1368 Threonine aldolase [Am 99.9 3.9E-20 8.5E-25 180.9 23.0 312 178-538 26-362 (384)
207 PRK00011 glyA serine hydroxyme 99.9 1.9E-19 4.2E-24 192.5 28.7 254 209-485 66-343 (416)
208 TIGR01814 kynureninase kynuren 99.9 2.7E-19 5.8E-24 191.0 29.6 282 211-540 72-403 (406)
209 cd06450 DOPA_deC_like DOPA dec 99.9 5.5E-20 1.2E-24 191.2 23.7 267 209-540 37-344 (345)
210 COG2008 GLY1 Threonine aldolas 99.9 4.6E-19 9.9E-24 179.4 28.3 263 178-464 4-291 (342)
211 PRK03244 argD acetylornithine 99.9 3.5E-19 7.5E-24 189.5 28.8 288 203-540 78-394 (398)
212 PLN02724 Molybdenum cofactor s 99.8 5.4E-19 1.2E-23 203.3 31.8 325 197-540 65-484 (805)
213 PRK15407 lipopolysaccharide bi 99.8 7.7E-19 1.7E-23 188.9 29.2 209 209-429 62-330 (438)
214 PLN02231 alanine transaminase 99.8 2.2E-18 4.7E-23 189.5 32.2 216 210-431 168-441 (534)
215 PTZ00376 aspartate aminotransf 99.8 1E-18 2.2E-23 186.5 28.7 213 210-427 72-337 (404)
216 PRK04073 rocD ornithine--oxo-a 99.8 1.2E-18 2.6E-23 185.4 28.4 253 207-482 79-362 (396)
217 PLN02672 methionine S-methyltr 99.8 2E-18 4.4E-23 198.9 31.2 212 211-427 735-989 (1082)
218 PLN02368 alanine transaminase 99.8 1.2E-18 2.6E-23 185.8 27.1 221 205-431 101-381 (407)
219 TIGR00707 argD acetylornithine 99.8 2.2E-18 4.8E-23 181.7 28.7 286 204-539 63-376 (379)
220 cd00610 OAT_like Acetyl ornith 99.8 3.3E-18 7.2E-23 182.3 30.3 288 208-540 77-411 (413)
221 PRK13238 tnaA tryptophanase/L- 99.8 6.3E-18 1.4E-22 182.8 32.5 212 208-427 76-335 (460)
222 PRK00451 glycine dehydrogenase 99.8 4.5E-18 9.7E-23 183.8 29.4 284 211-540 113-444 (447)
223 PTZ00094 serine hydroxymethylt 99.8 2.2E-18 4.8E-23 186.5 26.9 221 201-427 70-322 (452)
224 cd00615 Orn_deC_like Ornithine 99.8 3.6E-19 7.9E-24 182.0 19.7 166 202-374 51-235 (294)
225 PRK01278 argD acetylornithine 99.8 3.6E-18 7.9E-23 181.2 27.0 287 207-541 70-389 (389)
226 PRK08637 hypothetical protein; 99.8 2.2E-17 4.9E-22 175.2 32.7 291 200-540 36-386 (388)
227 PTZ00125 ornithine aminotransf 99.8 8.9E-18 1.9E-22 178.7 29.2 285 208-540 71-395 (400)
228 PRK09275 aspartate aminotransf 99.8 4.4E-18 9.5E-23 185.4 27.2 161 211-375 135-328 (527)
229 PRK09257 aromatic amino acid a 99.8 5.2E-18 1.1E-22 180.5 27.2 213 210-427 69-332 (396)
230 PRK02627 acetylornithine amino 99.8 1E-17 2.3E-22 177.7 27.4 288 204-540 75-394 (396)
231 PLN02397 aspartate transaminas 99.8 1.7E-17 3.7E-22 178.1 27.6 214 209-427 90-355 (423)
232 PRK07505 hypothetical protein; 99.8 8.3E-17 1.8E-21 171.6 32.2 192 206-404 87-297 (402)
233 cd00617 Tnase_like Tryptophana 99.8 3.6E-17 7.8E-22 174.9 29.2 212 208-427 51-310 (431)
234 TIGR03801 asp_4_decarbox aspar 99.8 3.4E-17 7.4E-22 178.2 29.0 145 227-375 157-327 (521)
235 KOG0259 Tyrosine aminotransfer 99.8 4E-16 8.7E-21 157.6 30.9 218 208-431 101-356 (447)
236 cd01494 AAT_I Aspartate aminot 99.8 1.6E-17 3.5E-22 153.4 17.6 156 212-373 2-170 (170)
237 PRK04366 glycine dehydrogenase 99.8 1.1E-16 2.3E-21 174.6 26.8 165 210-380 113-297 (481)
238 PRK02936 argD acetylornithine 99.8 2.5E-16 5.5E-21 166.3 29.0 250 206-481 67-343 (377)
239 TIGR01788 Glu-decarb-GAD gluta 99.8 2.2E-16 4.7E-21 169.2 27.4 287 210-541 80-430 (431)
240 PRK05093 argD bifunctional N-s 99.8 6.1E-16 1.3E-20 165.1 29.9 287 208-539 80-399 (403)
241 TIGR01885 Orn_aminotrans ornit 99.7 1.3E-15 2.8E-20 162.4 30.8 258 207-483 76-368 (401)
242 PLN03032 serine decarboxylase; 99.7 5.4E-16 1.2E-20 163.0 27.3 225 196-427 52-314 (374)
243 PRK02769 histidine decarboxyla 99.7 5.5E-16 1.2E-20 163.8 27.2 234 198-436 53-319 (380)
244 TIGR03246 arg_catab_astC succi 99.7 1.4E-15 3.1E-20 162.0 30.5 289 206-540 73-395 (397)
245 COG4992 ArgD Ornithine/acetylo 99.7 2.8E-16 6.1E-21 162.2 23.4 290 202-540 76-398 (404)
246 KOG0633 Histidinol phosphate a 99.7 2.7E-16 5.9E-21 151.5 21.5 289 206-537 65-374 (375)
247 PRK03080 phosphoserine aminotr 99.7 4.4E-16 9.6E-21 164.8 25.4 280 210-540 48-369 (378)
248 PRK13580 serine hydroxymethylt 99.7 1E-15 2.2E-20 164.2 27.5 281 216-539 101-444 (493)
249 PRK12381 bifunctional succinyl 99.7 2.3E-15 4.9E-20 160.9 30.2 287 206-539 77-398 (406)
250 PLN02624 ornithine-delta-amino 99.7 1.9E-15 4.2E-20 164.4 29.5 293 204-539 111-443 (474)
251 COG0075 Serine-pyruvate aminot 99.7 4.3E-15 9.3E-20 154.6 29.5 215 210-428 38-285 (383)
252 PLN03226 serine hydroxymethylt 99.7 3.3E-15 7.1E-20 162.1 29.2 216 208-430 74-335 (475)
253 cd00611 PSAT_like Phosphoserin 99.7 1.1E-15 2.3E-20 160.5 24.8 277 210-541 44-353 (355)
254 PLN02414 glycine dehydrogenase 99.7 2E-15 4.3E-20 174.0 28.4 166 211-380 569-755 (993)
255 PF06838 Met_gamma_lyase: Meth 99.7 1.5E-15 3.2E-20 153.9 22.7 253 208-478 52-332 (403)
256 PF01212 Beta_elim_lyase: Beta 99.7 3.8E-17 8.2E-22 166.3 10.8 221 203-429 24-272 (290)
257 TIGR01364 serC_1 phosphoserine 99.7 7.3E-15 1.6E-19 153.8 27.7 286 200-540 24-344 (349)
258 PLN00144 acetylornithine trans 99.7 5.8E-15 1.3E-19 156.5 27.1 283 207-540 54-380 (382)
259 KOG1360 5-aminolevulinate synt 99.7 2.3E-15 5E-20 152.4 21.6 280 209-539 215-519 (570)
260 KOG0256 1-aminocyclopropane-1- 99.7 1.4E-14 3.1E-19 147.6 26.8 279 212-538 123-459 (471)
261 TIGR03531 selenium_SpcS O-phos 99.7 6.6E-15 1.4E-19 157.5 25.5 212 210-427 105-344 (444)
262 PRK04260 acetylornithine amino 99.7 1.6E-14 3.4E-19 152.7 27.5 277 210-539 66-372 (375)
263 PRK05355 3-phosphoserine/phosp 99.7 6E-15 1.3E-19 155.1 24.1 276 210-540 48-354 (360)
264 TIGR00713 hemL glutamate-1-sem 99.7 1.9E-14 4.1E-19 154.6 28.3 285 207-541 85-423 (423)
265 PLN02271 serine hydroxymethylt 99.7 3.4E-14 7.3E-19 153.3 29.9 252 202-477 180-490 (586)
266 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 1.5E-15 3.3E-20 160.1 17.6 208 208-425 64-315 (417)
267 PRK04612 argD acetylornithine 99.7 3.5E-14 7.5E-19 151.7 26.5 290 207-540 79-403 (408)
268 PRK04013 argD acetylornithine/ 99.7 2.5E-14 5.5E-19 150.3 25.0 277 204-540 60-360 (364)
269 TIGR01366 serC_3 phosphoserine 99.6 1.7E-14 3.7E-19 151.8 22.6 284 210-540 41-356 (361)
270 TIGR03372 putres_am_tran putre 99.6 2E-13 4.4E-18 146.9 31.0 287 207-540 114-440 (442)
271 TIGR02618 tyr_phenol_ly tyrosi 99.6 2.5E-14 5.5E-19 151.5 23.3 214 208-430 69-330 (450)
272 KOG1359 Glycine C-acetyltransf 99.6 1.5E-14 3.2E-19 141.7 19.7 210 208-426 110-334 (417)
273 PRK03715 argD acetylornithine 99.6 3.1E-13 6.7E-18 143.9 29.5 236 206-464 74-339 (395)
274 KOG0634 Aromatic amino acid am 99.6 3.6E-13 7.7E-18 138.6 27.7 271 228-536 126-459 (472)
275 PRK05964 adenosylmethionine--8 99.6 3.3E-13 7.2E-18 145.0 28.4 289 206-540 81-422 (423)
276 COG0112 GlyA Glycine/serine hy 99.6 1.8E-13 3.9E-18 139.9 23.6 253 201-477 57-339 (413)
277 PRK11522 putrescine--2-oxoglut 99.6 5.9E-13 1.3E-17 144.2 29.0 292 207-540 121-451 (459)
278 PRK08117 4-aminobutyrate amino 99.6 3.8E-13 8.2E-18 145.0 27.5 295 205-540 81-429 (433)
279 PRK09792 4-aminobutyrate trans 99.6 7.1E-13 1.5E-17 142.3 28.1 288 204-538 77-419 (421)
280 PRK08088 4-aminobutyrate amino 99.6 8.1E-13 1.8E-17 142.1 28.2 289 207-540 81-423 (425)
281 PRK00062 glutamate-1-semialdeh 99.6 3.4E-13 7.4E-18 145.0 25.2 287 207-540 87-424 (426)
282 COG1103 Archaea-specific pyrid 99.6 4.1E-13 8.8E-18 130.4 22.6 218 208-431 59-302 (382)
283 PRK08360 4-aminobutyrate amino 99.6 9.2E-13 2E-17 142.2 27.8 284 207-539 81-425 (443)
284 PRK05367 glycine dehydrogenase 99.6 1.1E-12 2.5E-17 151.8 30.2 289 211-540 543-871 (954)
285 PF00464 SHMT: Serine hydroxym 99.6 3.6E-13 7.7E-18 141.7 23.1 240 216-478 72-356 (399)
286 PRK05367 glycine dehydrogenase 99.6 8.6E-13 1.9E-17 152.9 28.2 160 211-380 122-292 (954)
287 PRK07495 4-aminobutyrate amino 99.6 1.2E-12 2.5E-17 140.7 26.9 290 206-540 79-421 (425)
288 PRK08593 4-aminobutyrate amino 99.6 3.6E-12 7.8E-17 137.8 30.7 254 206-481 81-393 (445)
289 PRK15029 arginine decarboxylas 99.6 2.1E-13 4.5E-18 153.5 21.7 176 208-390 203-421 (755)
290 PRK06058 4-aminobutyrate amino 99.6 2.8E-12 6E-17 138.7 29.6 288 207-541 96-443 (443)
291 TIGR00700 GABAtrnsam 4-aminobu 99.6 4.1E-12 8.9E-17 136.4 30.7 288 204-538 70-418 (420)
292 TIGR02407 ectoine_ectB diamino 99.6 3.1E-12 6.6E-17 137.0 29.1 285 207-538 75-406 (412)
293 PRK06777 4-aminobutyrate amino 99.6 5E-12 1.1E-16 135.8 30.7 289 204-539 77-420 (421)
294 COG0160 GabT 4-aminobutyrate a 99.5 2.6E-12 5.6E-17 136.4 26.7 289 204-540 92-445 (447)
295 PLN02414 glycine dehydrogenase 99.5 1.4E-12 3E-17 150.7 26.4 163 211-380 149-320 (993)
296 PRK09221 beta alanine--pyruvat 99.5 2.9E-12 6.2E-17 138.5 27.0 288 207-540 89-443 (445)
297 PRK06105 aminotransferase; Pro 99.5 3.9E-12 8.4E-17 138.0 28.1 242 204-463 86-386 (460)
298 PRK09264 diaminobutyrate--2-ox 99.5 3.5E-12 7.5E-17 137.2 27.1 291 207-540 79-416 (425)
299 TIGR03799 NOD_PanD_pyr putativ 99.5 7.9E-12 1.7E-16 136.9 30.1 203 228-436 162-428 (522)
300 PLN02760 4-aminobutyrate:pyruv 99.5 5.9E-12 1.3E-16 137.8 28.9 288 207-540 130-491 (504)
301 PRK05965 hypothetical protein; 99.5 6.1E-12 1.3E-16 136.5 28.7 289 207-540 87-447 (459)
302 PRK13360 omega amino acid--pyr 99.5 7.1E-12 1.5E-16 135.3 28.8 288 207-540 86-440 (442)
303 PRK12403 putative aminotransfe 99.5 7.8E-12 1.7E-16 135.7 29.0 235 208-463 96-389 (460)
304 PRK13237 tyrosine phenol-lyase 99.5 1.2E-12 2.7E-17 139.1 22.1 212 208-427 76-335 (460)
305 KOG2862 Alanine-glyoxylate ami 99.5 1.3E-11 2.8E-16 122.3 27.6 213 212-428 52-302 (385)
306 COG0001 HemL Glutamate-1-semia 99.5 2.5E-12 5.4E-17 134.4 23.7 222 200-426 84-341 (432)
307 KOG1357 Serine palmitoyltransf 99.5 1.3E-13 2.8E-18 142.2 13.1 211 209-427 181-424 (519)
308 PRK06082 4-aminobutyrate amino 99.5 7.8E-12 1.7E-16 135.6 27.8 291 202-540 105-451 (459)
309 PRK07046 aminotransferase; Val 99.5 1.4E-11 3.1E-16 133.3 29.5 215 207-425 112-362 (453)
310 PLN02880 tyrosine decarboxylas 99.5 8.7E-12 1.9E-16 136.1 27.8 230 212-464 124-419 (490)
311 PRK07482 hypothetical protein; 99.5 1.2E-11 2.5E-16 134.3 28.7 238 205-463 89-389 (461)
312 PRK07678 aminotransferase; Val 99.5 1E-11 2.2E-16 134.4 28.1 294 206-541 85-450 (451)
313 PRK12389 glutamate-1-semialdeh 99.5 2.4E-11 5.2E-16 130.8 30.4 216 207-426 90-340 (428)
314 PRK13578 ornithine decarboxyla 99.5 1.2E-12 2.6E-17 146.2 20.2 175 209-390 173-395 (720)
315 PRK06173 adenosylmethionine--8 99.5 7.4E-12 1.6E-16 134.6 25.7 291 206-540 83-425 (429)
316 COG4100 Cystathionine beta-lya 99.5 5.2E-12 1.1E-16 124.4 21.9 258 200-478 58-343 (416)
317 PRK07986 adenosylmethionine--8 99.5 7.9E-12 1.7E-16 134.3 25.6 288 206-540 82-423 (428)
318 PRK12566 glycine dehydrogenase 99.5 7.2E-12 1.6E-16 142.5 26.4 148 211-362 544-709 (954)
319 TIGR00461 gcvP glycine dehydro 99.5 4.5E-12 9.7E-17 144.9 24.9 213 211-428 531-786 (939)
320 PRK06541 hypothetical protein; 99.5 2.5E-11 5.4E-16 131.7 29.2 240 206-463 91-386 (460)
321 PLN02590 probable tyrosine dec 99.5 2.8E-11 6.1E-16 132.7 29.8 258 202-478 158-488 (539)
322 TIGR00709 dat 2,4-diaminobutyr 99.5 2.9E-11 6.2E-16 130.7 29.4 234 207-463 79-366 (442)
323 PRK06943 adenosylmethionine--8 99.5 1.4E-11 3.1E-16 133.3 27.0 289 206-540 93-446 (453)
324 PRK05769 4-aminobutyrate amino 99.5 2.5E-11 5.5E-16 131.1 28.4 283 206-540 93-439 (441)
325 PRK06918 4-aminobutyrate amino 99.5 3.5E-11 7.5E-16 130.5 29.5 288 206-540 93-443 (451)
326 PRK05630 adenosylmethionine--8 99.5 1.2E-11 2.6E-16 132.7 25.3 286 206-539 79-419 (422)
327 PRK07481 hypothetical protein; 99.5 3.6E-11 7.9E-16 130.1 29.0 286 207-541 83-446 (449)
328 PLN02263 serine decarboxylase 99.5 5.6E-11 1.2E-15 127.6 29.8 222 201-428 121-382 (470)
329 PF03841 SelA: L-seryl-tRNA se 99.5 1.2E-13 2.6E-18 141.7 8.9 176 214-395 51-248 (367)
330 PRK06062 hypothetical protein; 99.5 3.6E-11 7.8E-16 130.2 28.6 203 202-407 87-334 (451)
331 PRK05639 4-aminobutyrate amino 99.5 9.5E-11 2.1E-15 127.0 30.9 284 208-539 94-442 (457)
332 PRK06938 diaminobutyrate--2-ox 99.4 5.8E-11 1.3E-15 128.9 28.9 233 206-463 102-391 (464)
333 PRK08742 adenosylmethionine--8 99.4 2E-11 4.4E-16 132.6 25.1 235 206-463 103-404 (472)
334 PRK07480 putative aminotransfe 99.4 3.8E-11 8.3E-16 130.1 27.1 240 206-463 90-385 (456)
335 PLN02482 glutamate-1-semialdeh 99.4 3.9E-11 8.5E-16 130.3 26.9 215 208-426 137-386 (474)
336 PRK06149 hypothetical protein; 99.4 8.1E-11 1.8E-15 138.4 31.0 288 204-540 618-970 (972)
337 PRK00615 glutamate-1-semialdeh 99.4 4E-11 8.8E-16 129.0 25.9 215 207-425 90-340 (433)
338 COG0161 BioA Adenosylmethionin 99.4 3.8E-11 8.1E-16 127.0 24.9 292 203-540 81-443 (449)
339 PRK07036 hypothetical protein; 99.4 9.8E-11 2.1E-15 127.3 28.8 239 207-463 92-389 (466)
340 PRK06916 adenosylmethionine--8 99.4 5.7E-11 1.2E-15 128.9 25.9 239 207-463 96-392 (460)
341 PRK07030 adenosylmethionine--8 99.4 8.1E-11 1.8E-15 127.9 26.8 240 206-463 86-383 (466)
342 COG0076 GadB Glutamate decarbo 99.4 4.9E-11 1.1E-15 128.6 24.6 227 214-464 105-381 (460)
343 TIGR03251 LAT_fam L-lysine 6-t 99.4 1.1E-10 2.4E-15 125.8 26.8 288 206-541 81-431 (431)
344 PRK15400 lysine decarboxylase 99.4 4E-11 8.7E-16 134.0 23.3 173 209-390 194-399 (714)
345 PF00202 Aminotran_3: Aminotra 99.4 2E-11 4.4E-16 127.4 19.8 237 205-463 54-338 (339)
346 PRK07483 hypothetical protein; 99.4 1.4E-10 3.1E-15 125.3 25.9 294 206-540 69-437 (443)
347 PRK06931 diaminobutyrate--2-ox 99.4 6.2E-10 1.3E-14 120.8 30.0 233 206-463 97-385 (459)
348 PRK06917 hypothetical protein; 99.3 1.3E-09 2.8E-14 118.0 31.3 294 206-540 70-437 (447)
349 PRK15399 lysine decarboxylase 99.3 6.6E-11 1.4E-15 132.2 21.5 172 209-390 194-399 (713)
350 COG3977 Alanine-alpha-ketoisov 99.3 1.8E-10 4E-15 113.6 21.4 295 210-539 78-410 (417)
351 TIGR00508 bioA adenosylmethion 99.3 7.1E-10 1.5E-14 119.4 27.8 257 206-481 84-391 (427)
352 PRK08297 L-lysine aminotransfe 99.3 2.7E-10 5.9E-15 123.1 24.7 286 206-540 88-441 (443)
353 COG1921 SelA Selenocysteine sy 99.3 5E-11 1.1E-15 123.5 17.8 187 214-406 72-269 (395)
354 PRK06148 hypothetical protein; 99.3 1.1E-09 2.4E-14 129.1 30.9 288 205-540 658-1010(1013)
355 PF12897 Aminotran_MocR: Alani 99.3 2.5E-09 5.4E-14 109.7 28.1 284 210-535 69-407 (425)
356 PF00282 Pyridoxal_deC: Pyrido 99.3 2E-10 4.3E-15 121.4 19.8 224 207-436 72-363 (373)
357 TIGR01365 serC_2 phosphoserine 99.3 1.1E-09 2.4E-14 115.4 25.0 205 210-429 39-284 (374)
358 COG1982 LdcC Arginine/lysine/o 99.3 6.6E-10 1.4E-14 120.0 23.0 156 211-373 71-246 (557)
359 COG3844 Kynureninase [Amino ac 99.3 1.2E-09 2.6E-14 109.2 22.5 161 212-373 78-244 (407)
360 TIGR00699 GABAtrns_euk 4-amino 99.2 1.1E-09 2.3E-14 118.6 23.8 282 207-540 98-462 (464)
361 COG0403 GcvP Glycine cleavage 99.2 7.6E-09 1.6E-13 107.2 28.0 161 213-378 123-295 (450)
362 TIGR00461 gcvP glycine dehydro 99.2 1.8E-09 4E-14 123.8 26.0 162 212-380 111-280 (939)
363 PLN02974 adenosylmethionine-8- 99.2 5.4E-09 1.2E-13 119.7 29.1 238 206-464 405-758 (817)
364 KOG1404 Alanine-glyoxylate ami 99.2 1.7E-09 3.7E-14 110.5 22.1 263 202-488 84-407 (442)
365 PLN02452 phosphoserine transam 99.2 2.9E-09 6.3E-14 112.1 24.3 244 210-483 52-327 (365)
366 KOG1402 Ornithine aminotransfe 99.2 3.6E-09 7.9E-14 105.8 22.6 237 209-463 100-370 (427)
367 TIGR02617 tnaA_trp_ase tryptop 99.2 9.9E-10 2.1E-14 116.0 19.4 241 178-427 46-344 (467)
368 PF02347 GDC-P: Glycine cleava 99.2 6.8E-09 1.5E-13 110.0 24.9 275 211-538 111-429 (429)
369 PRK06209 glutamate-1-semialdeh 99.2 6.6E-09 1.4E-13 112.0 24.4 211 211-426 89-328 (431)
370 KOG1358 Serine palmitoyltransf 99.1 1.6E-09 3.6E-14 110.4 17.5 184 211-402 140-347 (467)
371 PRK12462 phosphoserine aminotr 99.0 1.1E-07 2.4E-12 99.6 26.1 241 211-481 50-324 (364)
372 KOG1401 Acetylornithine aminot 99.0 5.9E-08 1.3E-12 100.0 22.5 222 201-426 89-347 (433)
373 TIGR03811 tyr_de_CO2_Ent tyros 98.9 2.9E-06 6.3E-11 94.5 34.0 171 251-427 224-475 (608)
374 KOG2467 Glycine/serine hydroxy 98.9 2.1E-07 4.6E-12 94.4 22.6 256 200-478 70-377 (477)
375 PRK12566 glycine dehydrogenase 98.9 4.1E-07 8.8E-12 104.3 26.7 157 212-379 126-293 (954)
376 COG1448 TyrB Aspartate/tyrosin 98.9 2.1E-06 4.6E-11 88.4 26.9 249 210-478 69-367 (396)
377 COG1003 GcvP Glycine cleavage 98.8 2.6E-07 5.7E-12 95.9 19.1 145 211-360 110-270 (496)
378 PF04864 Alliinase_C: Allinase 98.7 6.3E-07 1.4E-11 91.2 16.4 282 211-534 44-359 (363)
379 KOG0628 Aromatic-L-amino-acid/ 98.5 1.7E-05 3.7E-10 83.2 21.5 266 192-479 91-428 (511)
380 KOG0258 Alanine aminotransfera 98.4 1.6E-06 3.4E-11 89.0 10.8 165 203-371 105-310 (475)
381 KOG1383 Glutamate decarboxylas 98.4 1.4E-05 3.1E-10 83.9 17.4 216 210-431 116-377 (491)
382 KOG1403 Predicted alanine-glyo 98.4 9.1E-06 2E-10 80.8 14.4 286 214-539 91-436 (452)
383 PF05889 SLA_LP_auto_ag: Solub 98.1 4E-05 8.7E-10 80.0 13.1 152 226-383 75-248 (389)
384 KOG1405 4-aminobutyrate aminot 97.9 0.00017 3.7E-09 73.5 13.3 179 285-488 255-452 (484)
385 COG1932 SerC Phosphoserine ami 97.8 0.0024 5.2E-08 65.9 19.7 270 211-539 51-362 (365)
386 KOG3846 L-kynurenine hydrolase 97.7 0.0022 4.7E-08 64.5 16.5 159 216-374 117-293 (465)
387 KOG2040 Glycine dehydrogenase 97.6 0.0014 3E-08 71.5 15.5 216 211-430 583-839 (1001)
388 KOG2040 Glycine dehydrogenase 97.6 0.014 3E-07 64.0 22.5 137 216-358 169-309 (1001)
389 KOG0629 Glutamate decarboxylas 97.5 0.0012 2.5E-08 69.1 13.1 211 217-433 148-419 (510)
390 KOG1412 Aspartate aminotransfe 97.5 0.028 6E-07 56.9 21.5 149 229-381 103-279 (410)
391 COG3033 TnaA Tryptophanase [Am 97.0 0.019 4.1E-07 59.2 14.8 212 208-427 77-346 (471)
392 KOG1411 Aspartate aminotransfe 96.2 0.27 5.8E-06 50.7 16.5 194 182-381 69-299 (427)
393 PLN02994 1-aminocyclopropane-1 96.1 0.017 3.7E-07 53.4 7.0 50 212-261 94-153 (153)
394 KOG3843 Predicted serine hydro 94.2 0.21 4.6E-06 49.6 8.3 164 214-385 61-252 (432)
395 PF02310 B12-binding: B12 bind 86.4 2 4.2E-05 37.3 6.2 89 263-353 17-110 (121)
396 cd02067 B12-binding B12 bindin 81.8 7 0.00015 34.0 7.7 90 263-354 16-109 (119)
397 PF05368 NmrA: NmrA-like famil 75.9 10 0.00022 36.8 7.6 61 269-331 39-99 (233)
398 PF01596 Methyltransf_3: O-met 68.2 28 0.0006 33.8 8.5 124 208-337 29-159 (205)
399 cd00532 MGS-like MGS-like doma 67.0 25 0.00053 30.4 7.2 84 241-333 17-106 (112)
400 TIGR02026 BchE magnesium-proto 63.8 24 0.00051 39.0 7.9 85 266-353 28-121 (497)
401 cd02068 radical_SAM_B12_BD B12 62.2 33 0.00071 30.1 7.2 83 267-352 9-95 (127)
402 PLN02476 O-methyltransferase 61.5 65 0.0014 32.8 10.0 123 208-336 102-231 (278)
403 COG0036 Rpe Pentose-5-phosphat 61.3 1.1E+02 0.0023 30.2 10.9 127 241-384 76-214 (220)
404 PLN02589 caffeoyl-CoA O-methyl 61.2 1.2E+02 0.0026 30.3 11.7 123 209-337 64-194 (247)
405 cd04736 MDH_FMN Mandelate dehy 60.5 34 0.00074 36.2 8.0 83 266-352 228-316 (361)
406 PRK08091 ribulose-phosphate 3- 59.7 85 0.0019 31.0 10.2 80 270-352 112-205 (228)
407 PRK13396 3-deoxy-7-phosphohept 58.0 94 0.002 32.8 10.7 44 296-339 236-284 (352)
408 TIGR01305 GMP_reduct_1 guanosi 57.4 2.5E+02 0.0055 29.5 13.5 125 228-353 97-240 (343)
409 COG1066 Sms Predicted ATP-depe 54.1 1.5E+02 0.0032 32.0 11.3 85 244-331 116-215 (456)
410 cd02071 MM_CoA_mut_B12_BD meth 53.5 51 0.0011 28.8 6.9 96 259-356 12-111 (122)
411 cd05013 SIS_RpiR RpiR-like pro 53.2 1.1E+02 0.0024 26.3 9.1 30 297-330 62-91 (139)
412 COG1606 ATP-utilizing enzymes 53.0 60 0.0013 32.5 7.8 99 226-336 19-123 (269)
413 cd01078 NAD_bind_H4MPT_DH NADP 52.1 1.7E+02 0.0038 27.4 10.9 104 227-339 30-134 (194)
414 TIGR00640 acid_CoA_mut_C methy 50.1 73 0.0016 28.5 7.4 72 258-331 14-89 (132)
415 PRK08745 ribulose-phosphate 3- 49.9 1.4E+02 0.0029 29.4 9.8 81 269-352 105-197 (223)
416 PRK05096 guanosine 5'-monophos 49.8 3.3E+02 0.0072 28.6 14.0 133 228-363 98-249 (346)
417 PRK05567 inosine 5'-monophosph 49.2 55 0.0012 36.0 7.8 110 242-352 233-358 (486)
418 PRK08883 ribulose-phosphate 3- 49.1 1.1E+02 0.0024 29.9 9.1 81 269-352 101-193 (220)
419 PRK05234 mgsA methylglyoxal sy 47.7 87 0.0019 28.5 7.5 48 286-334 65-114 (142)
420 PF13460 NAD_binding_10: NADH( 47.3 87 0.0019 28.7 7.8 84 233-327 7-90 (183)
421 cd04726 KGPDC_HPS 3-Keto-L-gul 47.0 1.5E+02 0.0032 28.0 9.5 106 245-352 73-184 (202)
422 PRK14057 epimerase; Provisiona 46.5 1.4E+02 0.003 30.1 9.3 73 277-352 137-219 (254)
423 cd01422 MGS Methylglyoxal synt 46.3 1.4E+02 0.0029 26.0 8.3 58 273-331 44-106 (115)
424 PLN02781 Probable caffeoyl-CoA 45.1 3.1E+02 0.0067 26.9 12.2 123 208-336 52-181 (234)
425 TIGR00262 trpA tryptophan synt 44.5 1.6E+02 0.0034 29.6 9.5 90 242-333 108-205 (256)
426 cd00381 IMPDH IMPDH: The catal 43.7 3.9E+02 0.0086 27.7 14.0 138 213-352 70-224 (325)
427 CHL00200 trpA tryptophan synth 43.6 1.3E+02 0.0029 30.2 8.9 89 242-332 112-208 (263)
428 PLN02274 inosine-5'-monophosph 43.3 1.2E+02 0.0025 33.8 9.1 109 243-352 254-378 (505)
429 PRK13397 3-deoxy-7-phosphohept 43.1 2.5E+02 0.0054 28.2 10.5 44 296-339 150-197 (250)
430 cd04795 SIS SIS domain. SIS (S 42.1 1.1E+02 0.0024 24.1 6.8 53 274-331 25-79 (87)
431 cd02065 B12-binding_like B12 b 41.4 1.7E+02 0.0036 25.0 8.2 84 264-352 17-103 (125)
432 PTZ00314 inosine-5'-monophosph 40.6 1.1E+02 0.0024 33.9 8.4 111 241-352 245-371 (495)
433 COG0552 FtsY Signal recognitio 40.0 1.4E+02 0.0031 31.2 8.4 131 236-372 154-305 (340)
434 TIGR00511 ribulose_e2b2 ribose 39.6 2.8E+02 0.0061 28.5 10.7 104 222-332 112-223 (301)
435 PRK08535 translation initiatio 39.0 2.7E+02 0.0059 28.7 10.5 103 222-331 117-227 (310)
436 COG2099 CobK Precorrin-6x redu 38.9 95 0.0021 31.1 6.7 93 229-331 5-98 (257)
437 smart00851 MGS MGS-like domain 38.8 1.3E+02 0.0027 24.7 6.6 43 286-330 45-89 (90)
438 TIGR03573 WbuX N-acetyl sugar 38.7 1.7E+02 0.0036 30.7 9.1 117 212-335 42-169 (343)
439 PRK12595 bifunctional 3-deoxy- 38.5 2.3E+02 0.005 30.0 10.1 80 270-349 221-317 (360)
440 PRK13307 bifunctional formalde 38.4 2.6E+02 0.0056 30.0 10.4 83 268-352 270-356 (391)
441 PRK02261 methylaspartate mutas 37.6 1.2E+02 0.0025 27.4 6.7 61 263-325 20-81 (137)
442 PRK06843 inosine 5-monophospha 37.3 1.4E+02 0.003 32.2 8.2 111 241-352 157-283 (404)
443 cd02070 corrinoid_protein_B12- 36.5 2.8E+02 0.0061 26.5 9.6 89 263-355 99-192 (201)
444 PF14258 DUF4350: Domain of un 36.3 1.6E+02 0.0035 22.7 6.6 59 268-332 12-70 (70)
445 COG1184 GCD2 Translation initi 35.7 4.2E+02 0.0091 27.4 11.0 103 222-331 116-226 (301)
446 TIGR00524 eIF-2B_rel eIF-2B al 35.1 3.9E+02 0.0085 27.5 10.9 79 250-332 153-237 (303)
447 PF08423 Rad51: Rad51; InterP 35.0 1.1E+02 0.0024 30.6 6.7 39 295-333 132-185 (256)
448 TIGR03649 ergot_EASG ergot alk 34.8 1.5E+02 0.0032 29.5 7.7 76 243-327 17-97 (285)
449 PF02142 MGS: MGS-like domain 34.7 18 0.0004 30.1 0.9 78 244-330 8-94 (95)
450 PRK09722 allulose-6-phosphate 34.6 2.5E+02 0.0055 27.7 9.0 81 269-352 103-195 (229)
451 PRK08335 translation initiatio 34.1 3.9E+02 0.0085 27.2 10.5 105 220-331 104-216 (275)
452 COG0296 GlgB 1,4-alpha-glucan 33.6 37 0.0008 38.5 3.3 34 304-337 205-238 (628)
453 cd03332 LMO_FMN L-Lactate 2-mo 33.1 1.6E+02 0.0035 31.5 7.8 83 266-352 245-335 (383)
454 PRK00414 gmhA phosphoheptose i 32.7 2.5E+02 0.0055 26.7 8.5 43 308-354 120-162 (192)
455 COG1587 HemD Uroporphyrinogen- 32.4 3.5E+02 0.0076 26.7 9.9 107 215-337 41-157 (248)
456 PLN02591 tryptophan synthase 32.4 3.1E+02 0.0067 27.4 9.4 89 241-331 98-194 (250)
457 PF15608 PELOTA_1: PELOTA RNA 32.2 1.5E+02 0.0032 25.4 6.0 65 264-334 23-88 (100)
458 TIGR01302 IMP_dehydrog inosine 32.1 1.6E+02 0.0034 32.1 7.9 108 244-352 231-354 (450)
459 cd05005 SIS_PHI Hexulose-6-pho 32.0 3.1E+02 0.0066 25.4 8.9 24 307-330 83-106 (179)
460 cd01424 MGS_CPS_II Methylglyox 31.6 2.4E+02 0.0053 23.8 7.6 85 238-332 15-101 (110)
461 COG2185 Sbm Methylmalonyl-CoA 31.5 1.9E+02 0.004 26.5 6.8 74 251-327 14-92 (143)
462 COG0616 SppA Periplasmic serin 31.4 1.5E+02 0.0033 30.7 7.2 87 288-382 89-179 (317)
463 TIGR01501 MthylAspMutase methy 31.3 1.5E+02 0.0031 26.8 6.2 67 258-326 13-80 (134)
464 cd02072 Glm_B12_BD B12 binding 31.1 1.5E+02 0.0033 26.5 6.2 66 259-326 12-78 (128)
465 cd01018 ZntC Metal binding pro 30.8 2.4E+02 0.0052 28.1 8.5 70 248-331 169-245 (266)
466 cd07018 S49_SppA_67K_type Sign 30.4 2E+02 0.0044 27.9 7.6 86 286-380 36-126 (222)
467 KOG4589 Cell division protein 30.2 2.3E+02 0.0051 27.3 7.5 42 283-324 120-165 (232)
468 PF07085 DRTGG: DRTGG domain; 30.2 1.3E+02 0.0027 25.4 5.4 48 277-331 43-90 (105)
469 PF00834 Ribul_P_3_epim: Ribul 30.2 1.1E+02 0.0023 29.7 5.5 82 269-353 100-193 (201)
470 COG1091 RfbD dTDP-4-dehydrorha 30.2 2E+02 0.0043 29.4 7.6 52 280-331 34-97 (281)
471 COG0159 TrpA Tryptophan syntha 30.1 3.3E+02 0.0071 27.6 9.0 14 299-312 173-186 (265)
472 COG2870 RfaE ADP-heptose synth 30.1 75 0.0016 34.0 4.6 45 286-334 135-179 (467)
473 cd01121 Sms Sms (bacterial rad 30.0 2.7E+02 0.0059 29.6 9.0 53 279-331 141-205 (372)
474 cd00150 PlantTI Plant trypsin 29.8 24 0.00052 22.5 0.6 15 8-30 1-15 (27)
475 COG1737 RpiR Transcriptional r 29.7 4.2E+02 0.0091 26.7 10.1 44 307-354 185-228 (281)
476 PRK11557 putative DNA-binding 29.5 5.4E+02 0.012 25.6 10.9 41 307-353 183-225 (278)
477 smart00642 Aamy Alpha-amylase 29.5 53 0.0011 30.6 3.2 29 308-336 65-93 (166)
478 PRK07807 inosine 5-monophospha 29.3 2.5E+02 0.0054 31.0 8.8 112 240-352 230-357 (479)
479 PF03435 Saccharop_dh: Sacchar 29.2 2.4E+02 0.0052 29.7 8.6 93 229-332 2-96 (386)
480 PF03652 UPF0081: Uncharacteri 29.1 90 0.0019 28.1 4.5 56 283-338 38-100 (135)
481 cd01017 AdcA Metal binding pro 29.1 2.2E+02 0.0048 28.6 7.9 69 248-330 170-247 (282)
482 COG1058 CinA Predicted nucleot 28.9 1E+02 0.0022 31.0 5.2 84 247-334 8-95 (255)
483 cd01137 PsaA Metal binding pro 28.8 1.5E+02 0.0033 30.1 6.7 68 249-330 177-253 (287)
484 COG0367 AsnB Asparagine syntha 28.8 2.1E+02 0.0045 32.1 8.2 100 226-331 232-337 (542)
485 PF01008 IF-2B: Initiation fac 28.6 2.8E+02 0.0061 27.8 8.6 101 226-332 108-216 (282)
486 PF01408 GFO_IDH_MocA: Oxidore 28.6 98 0.0021 26.2 4.6 31 299-331 88-118 (120)
487 PF09419 PGP_phosphatase: Mito 28.3 1.8E+02 0.004 27.3 6.5 59 270-331 36-111 (168)
488 PF00478 IMPDH: IMP dehydrogen 28.2 66 0.0014 33.9 3.9 118 243-363 114-247 (352)
489 PRK13937 phosphoheptose isomer 27.8 5.2E+02 0.011 24.3 10.4 41 308-352 115-155 (188)
490 PRK13125 trpA tryptophan synth 27.7 3E+02 0.0066 27.1 8.5 87 245-333 97-192 (244)
491 PRK03673 hypothetical protein; 27.6 86 0.0019 33.6 4.8 84 247-334 8-95 (396)
492 TIGR00715 precor6x_red precorr 27.5 2E+02 0.0044 28.9 7.1 92 229-330 3-96 (256)
493 PRK02705 murD UDP-N-acetylmura 26.6 3.8E+02 0.0081 28.9 9.7 75 228-306 3-77 (459)
494 cd04724 Tryptophan_synthase_al 26.3 3.9E+02 0.0084 26.4 8.9 91 242-334 97-195 (242)
495 TIGR00649 MG423 conserved hypo 26.2 3.5E+02 0.0076 29.0 9.3 76 247-327 317-401 (422)
496 PRK12724 flagellar biosynthesi 26.0 3E+02 0.0066 29.9 8.5 99 237-337 240-346 (432)
497 COG1748 LYS9 Saccharopine dehy 25.7 4.1E+02 0.009 28.5 9.4 108 227-339 3-129 (389)
498 TIGR01182 eda Entner-Doudoroff 25.6 4.5E+02 0.0096 25.5 8.9 105 240-360 24-129 (204)
499 PF03279 Lip_A_acyltrans: Bact 25.6 6.4E+02 0.014 25.3 10.6 20 315-334 181-201 (295)
500 TIGR03127 RuMP_HxlB 6-phospho 25.5 5.2E+02 0.011 23.8 9.2 42 308-353 81-122 (179)
No 1
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-80 Score=642.28 Aligned_cols=387 Identities=43% Similarity=0.710 Sum_probs=364.3
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
++.|+++|.|...+ ..+|++++|||+||||.|++.++..+.+.++..+|.|+|++||+++.||+++++++|++.++.|
T Consensus 7 ~~~T~~v~~g~~~~--~~~gav~~PI~~tStf~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~lE~~~a~LEg~~~~~af 84 (396)
T COG0626 7 SLTTRLVHAGRRPD--DLTGAVNPPIYLTSTFVFDSAGEGLDAFAGEEGGYDYSRTGNPTRDALEEALAELEGGEDAFAF 84 (396)
T ss_pred ccceeeEEcccccc--cCCCcccCCeeeeeeecccChhhhhhhccccccCcccccCCCccHHHHHHHHHHhhCCCcEEEe
Confidence 57899999997653 4589999999999999999998877666666788999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+|||+||..++.+++++||||++++..|++++.++..+++++|+++.++|..+.+++++++.+.+||+||+|+|+||+..
T Consensus 85 sSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~ 164 (396)
T COG0626 85 SSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLLE 164 (396)
T ss_pred cCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999988888888887435999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhh-hcCC
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHH-VLGG 389 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~-~li~~l~~~~~-~~g~ 389 (541)
+.||++|+++||++|+++||||||++|+.++|+++|+|||++|+|||++||+|+++|++++++ ++.+.+....+ .+|.
T Consensus 165 v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~ 244 (396)
T COG0626 165 VPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGA 244 (396)
T ss_pred cccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999888665 45556555444 5999
Q ss_pred CccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHH
Q 009172 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 469 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~ 469 (541)
.++|+++|+++|+++||..||+++++|++++++||++||.|++|+||++++||+|+++++|+.|+|+||+|+|+++ +++
T Consensus 245 ~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-~~~ 323 (396)
T COG0626 245 VLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-EAA 323 (396)
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-HHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987 889
Q ss_pred HHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
.+|+++|+++.+++||||++|++++|+.++|..++.+.+.+.|+.+++||||||+||++|||+||++||+++
T Consensus 324 ~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 324 KKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGLEDVEDLIADLEQALAKA 395 (396)
T ss_pred HHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864
No 2
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=5.3e-77 Score=625.40 Aligned_cols=383 Identities=46% Similarity=0.774 Sum_probs=342.7
Q ss_pred cccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeCC
Q 009172 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 233 (541)
Q Consensus 154 ~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sS 233 (541)
+|++||+|...++ ..+++++||||+|+||.|++.+++ +.+.++..+|.|+|++||+...||++||+++|++.+++++|
T Consensus 1 ~T~~vh~g~~~~~-~~~~~v~~pi~~sstf~~~~~~~~-~~~~~~~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~S 78 (386)
T PF01053_consen 1 ETLLVHAGRDPDE-DQTGAVNPPIYQSSTFVFDSAEEL-DAFAGEEKGYIYSRYGNPTVRALEQRLAALEGGEDALLFSS 78 (386)
T ss_dssp HHHHHHTTTTGGT-STTTBSS--B---SBBBBSSHHHH-HHHTTSSSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEESS
T ss_pred CcceEeCCCCCCC-CCCCCeeCCccccccCcccchHHH-HhhcCCCCCcceeccccccHHHHHHHHHHhhcccceeeccc
Confidence 4889999987642 358999999999999999999998 77777788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCccc
Q 009172 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 313 (541)
Q Consensus 234 G~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~ 313 (541)
||+|+.+++.+++++||+|++++..|++++.+++..++++|+++.++|..|++++++++++ +|++||+|+|+||++.+.
T Consensus 79 GmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~ 157 (386)
T PF01053_consen 79 GMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRP-NTKLVFLESPSNPTLEVP 157 (386)
T ss_dssp HHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCT-TEEEEEEESSBTTTTB--
T ss_pred hHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhccc-cceEEEEEcCCCcccccc
Confidence 9999999999999999999999999999999999889999999999999999999999998 599999999999999999
Q ss_pred CHHHHHHHHHhCC-CEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh--HHHHHHHHHhhhcCCC
Q 009172 314 DVKLVSDLCHKKG-AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRNLHHVLGGA 390 (541)
Q Consensus 314 di~~Ia~la~~~g-illvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~--~li~~l~~~~~~~g~~ 390 (541)
|+++|+++||++| +++|||+|+++++.++|+.+|+|++++|+|||++||+|+++|+++.++ ++.++++.....+|..
T Consensus 158 Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~ 237 (386)
T PF01053_consen 158 DLEAIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGAT 237 (386)
T ss_dssp -HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B
T ss_pred cHHHHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCcc
Confidence 9999999999998 999999999999999999999999999999999999999999999765 7888899888999999
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009172 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~ 470 (541)
++|+++|+++++++|+..|++++++|++++++||++||.|++|+||++++||+|+++++|+.|+|+|++|+++++.+.+.
T Consensus 238 ~~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~ 317 (386)
T PF01053_consen 238 LSPFDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAAR 317 (386)
T ss_dssp --HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHH
T ss_pred chHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997656899
Q ss_pred HHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
+|+++|+++.+++|||+.+|++++|+.++|..+++++++..|+++++||||||+||++|||+||++||+
T Consensus 318 ~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 318 RFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLEDPDDLIADLEQALE 386 (386)
T ss_dssp HHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHHH
T ss_pred hHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEeccCCHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999996
No 3
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-77 Score=597.81 Aligned_cols=386 Identities=38% Similarity=0.621 Sum_probs=365.3
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
+|+|++||+|+. + +.+++...|||+|++|.|++.++..+.|..+..++.|+|..||+.+.||++||.++|+-.++.+
T Consensus 7 ~f~T~~vHag~~-d--~~t~ara~PIyqtTsy~F~d~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~ 83 (426)
T COG2873 7 GFETLAVHAGQE-D--PTTGARAVPIYQTTSYVFDDTDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAV 83 (426)
T ss_pred CcchhhhcCCCC-C--CCCCceecceeeeeeeecCCHHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcchhhhhh
Confidence 699999999987 3 4689999999999999999999999999888889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+|||+|+..++..++++||+|+.+...|++++.++...++++|++++++|.+|++.++++|++ +||+||+|+..||.+.
T Consensus 84 aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~-nTkavf~EtigNP~~~ 162 (426)
T COG2873 84 ASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDE-NTKAVFAETIGNPGLD 162 (426)
T ss_pred ccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCc-ccceEEEEeccCCCcc
Confidence 999999999999999999999999999999999999899999999999999999999999998 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh--HH-------------
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KL------------- 376 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~--~l------------- 376 (541)
+.|+++|+++||++|+++|||+|+++++.++|+++|+|||++|+|||+||||..+||+++-.. +|
T Consensus 163 v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~ 242 (426)
T COG2873 163 VLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPD 242 (426)
T ss_pred ccCHHHHHHHHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999987321 11
Q ss_pred --------HH---------HHH-HHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009172 377 --------VT---------QIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGL 438 (541)
Q Consensus 377 --------i~---------~l~-~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl 438 (541)
.+ +.+ ...+.+|.+++|+.+|+++.+++||.+||+|+++|+.++++||++||+|.+|+||+|
T Consensus 243 p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL 322 (426)
T COG2873 243 PSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGL 322 (426)
T ss_pred ccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCC
Confidence 11 122 345678999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCe
Q 009172 439 KSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 517 (541)
Q Consensus 439 ~s~p~~~l~~~~~-~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~ 517 (541)
++||.|.+++|++ +|.|++++|+++++.+..++|+++|+++....+.|+..||++||++++|+.++++++.++|+++++
T Consensus 323 ~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~ 402 (426)
T COG2873 323 ASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDL 402 (426)
T ss_pred CCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCc
Confidence 9999999999998 789999999999988999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHhhC
Q 009172 518 VRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 518 IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
||+|||+||++|+|+||+|||+++
T Consensus 403 IRlSVGIEd~~DiiaDl~qAl~~~ 426 (426)
T COG2873 403 IRLSVGIEDIDDIIADLEQALEAA 426 (426)
T ss_pred EEEEeccCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999864
No 4
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=8.5e-73 Score=594.72 Aligned_cols=383 Identities=27% Similarity=0.459 Sum_probs=351.1
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhccc-CCCCCCCCCchhHHHHHHHHHHHhCCCcEEE
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~-~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~ 230 (541)
+++|.++|.|... ...+++++||||+|+||.|++.+++.+.+.++. .+|.|+|.+||+++.||++||+++|++.+++
T Consensus 5 ~~~t~~~~~~~~~--~~~~~~v~~pi~~sstf~f~~~~~~~~~~~~~~~~~~~YsR~~nPt~~~le~~la~LEg~~~a~~ 82 (395)
T PRK08114 5 KLDTQLVNAGRSK--KYTQGSVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQEAMCELEGGAGCAL 82 (395)
T ss_pred CcchheEeCCCCC--CCCCCCccCCeeCCCceecCCHHHHHHhhccCcCCCccccCCCChhHHHHHHHHHHHhCCCeEEE
Confidence 3679999999532 223589999999999999999998887765543 4699999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCC
Q 009172 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (541)
Q Consensus 231 ~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG 310 (541)
|+|||+|+.+++.+++++||+||+++..|++++.++...++++|+++.+++..|.+++++++++ +||+|++|+|+||+|
T Consensus 83 ~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l~~~l~~-~TrlV~~EtpsNp~~ 161 (395)
T PRK08114 83 YPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADIAKLIQP-NTKVVFLESPGSITM 161 (395)
T ss_pred EhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCC
Confidence 9999999999999999999999999999999999998888999999999999999999999987 599999999999999
Q ss_pred cccCHHHHHHHHHhCC--CEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcC
Q 009172 311 RCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG 388 (541)
Q Consensus 311 ~v~di~~Ia~la~~~g--illvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g 388 (541)
.+.|+++|+++||++| ++++||+||+.++.++|+++|+|++++|+|||++||+|+++|+++.++++.+.++......|
T Consensus 162 ~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G 241 (395)
T PRK08114 162 EVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMG 241 (395)
T ss_pred EeecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhcc
Confidence 9999999999999984 99999999999999999999999999999999999999999999888888788887777889
Q ss_pred CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC--CH
Q 009172 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DL 466 (541)
Q Consensus 389 ~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g--~~ 466 (541)
..++|+++|+++|+|+||..||+++++|+..+++||++||.|.+|+||+|++||+|+++++|+.|+|+|++|++++ +.
T Consensus 242 ~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~ 321 (395)
T PRK08114 242 QMVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTD 321 (395)
T ss_pred CCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 36
Q ss_pred HHHHHHHHHcCCCceeecCCCccccee--cCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 467 TATIKFIDALKIPYIAPSFGGCESIVD--QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 467 ~~~~~~l~~L~~~~iavS~G~~~sl~~--~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
+.+.+|+++|+++.+++|||+++||++ +|..++|.. +++ ..++.+++||||||+||++|||+||++||+++
T Consensus 322 ~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~-~~~---~~~~~~~liRlSvGlEd~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 322 EQLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIR-PAG---EVDFTGTLIRLHIGLEDVDDLIADLAAGFARI 394 (395)
T ss_pred HHHHHHHHhCCcceeecccCCccceeccCCchhhhccC-Chh---HhcCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 788999999999999999999999999 455555544 332 34667799999999999999999999999864
No 5
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=5.7e-72 Score=589.95 Aligned_cols=379 Identities=32% Similarity=0.532 Sum_probs=353.4
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
+++|+++|.|...+ ..+++++||||+|+||.|++.. +..+|.|+|++||+.+.||++||+++|++.++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~--------~~~~~~Y~R~~npt~~~Le~~lA~leg~e~ivvt 74 (388)
T PRK08861 5 KPATIAVRTGIESD--SQYHAVVPPIYLSTNYGFPAFG--------EVPKYDYTRSGNPNRGLLEQTLSELESGKGAVVT 74 (388)
T ss_pred CcccceeECCCCCC--CCCCCccCCcccCcceEeCCcC--------ccCCccccCCCCchHHHHHHHHHHHhCCCeEEEE
Confidence 47899999996543 2368999999999999998842 2347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++.+.|++++.++...+...|+++.+++..|++++++++++ +|++|++|+|+||||.
T Consensus 75 ~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~i~~-~tklV~lesP~NPtG~ 153 (388)
T PRK08861 75 NCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALDAALAK-KPKLILLETPSNPLVR 153 (388)
T ss_pred CCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999887776666677899999998899999999987 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCC
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~-~~li~~l~~~~~~~g~~ 390 (541)
++|+++|.++|+++|+++|+|++|+.++.++|+++|+|++++|+|||++||+|+++|+++++ +++.++++.++...|..
T Consensus 154 v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~ 233 (388)
T PRK08861 154 VVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGAT 233 (388)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999888899999999999999999999999999999875 56778888888889999
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009172 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~ 470 (541)
++|+++|+++++++||..|++++++|+.++++||++||.|.+|+||++++||+|+++++|+.|+|+|++|+++++.+.+.
T Consensus 234 ~~p~~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~ 313 (388)
T PRK08861 234 GTPFDSYMTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLK 313 (388)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987678889
Q ss_pred HHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
+|+++|+++.+++|||+++||+++|+.++|+.+++++++..|+++++||||||+||++|||+||++||+++
T Consensus 314 ~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE~~~dli~Dl~~al~~~ 384 (388)
T PRK08861 314 VFVKALALFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLEDAQDLIADLDQAFAKA 384 (388)
T ss_pred HHHhcCCcceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999863
No 6
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.8e-71 Score=591.00 Aligned_cols=383 Identities=29% Similarity=0.512 Sum_probs=353.9
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|.++|.|... .. +++++||||+++||.|++.+++...++....+|.|+|.+||++++||+.||+++|++.+++++
T Consensus 7 ~~t~~~~~g~~~--~~-~~~~~~PI~~sst~~f~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~leg~~~av~~~ 83 (432)
T PRK06702 7 KGTICVQGGYTP--KN-GEPRVLPLYQSTTYKYDTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELEGGVGAVATA 83 (432)
T ss_pred cchHheeCCCCC--CC-CCCccCCccCCcceecCCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHhCCCcEEEEC
Confidence 689999999633 22 689999999999999999988777665555689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC-CCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~-~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
|||+|+.+++.+++++||+||++.+.|+++..++...++.+|+++++++. .|+++++++|++ +||+|++|+|+||++.
T Consensus 84 SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~ 162 (432)
T PRK06702 84 SGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAESLGNPAMN 162 (432)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEcCCCcccc
Confidence 99999999999999999999999999999999887777889999999998 489999999998 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChH----------H-----
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK----------L----- 376 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~----------l----- 376 (541)
++|+++|+++|+++|+++|+|+||++|+.++|+++|+||+++|+|||++||+++++|+++.... +
T Consensus 163 v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~ 242 (432)
T PRK06702 163 VLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDP 242 (432)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999884221 1
Q ss_pred ----------------HHHHH-HHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCC
Q 009172 377 ----------------VTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLK 439 (541)
Q Consensus 377 ----------------i~~l~-~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~ 439 (541)
+.+.+ .....+|..++|+++|+++++|++++.|++++++|+.++++||++||.|.+|+||+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~ 322 (432)
T PRK06702 243 SYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLD 322 (432)
T ss_pred cccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC
Confidence 11122 3455678999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeE
Q 009172 440 SHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 518 (541)
Q Consensus 440 s~p~~~l~~~~~-~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~I 518 (541)
+||+|+++++|| .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++|++.||+.++|..++.+.++..|+++++|
T Consensus 323 ~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~li 402 (432)
T PRK06702 323 SNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLI 402 (432)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeE
Confidence 999999999999 7899999999987778889999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHh
Q 009172 519 RFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 519 RlSvG~Ed~edli~dL~~AL~ 539 (541)
|||||+||+||||+||+|||+
T Consensus 403 RlSvGlEd~eDLi~Dl~~Al~ 423 (432)
T PRK06702 403 RLSVGIEDVSDIIADLEAALV 423 (432)
T ss_pred EEEeccCCHHHHHHHHHHHHh
Confidence 999999999999999999997
No 7
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-72 Score=573.57 Aligned_cols=388 Identities=43% Similarity=0.657 Sum_probs=361.1
Q ss_pred cCCCccccccccCCcCCCCCCCCcccCCccccCccccCCh-HHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCc
Q 009172 149 FLSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKT-AELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAES 227 (541)
Q Consensus 149 ~~~~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~-~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~ 227 (541)
+..+++|.++|+|+..+.. ..++++||||.++++.|++. .+..... ...+|.|+|.+||+...|++.+++++|++.
T Consensus 18 ~~~~~~t~~~~~g~~~~~~-~~~~v~~pI~~~~s~tfk~~~~~~~~~~--~~~~~~Ysr~~nPt~~~le~~iaal~ga~~ 94 (409)
T KOG0053|consen 18 RLSHLDTNLLHAGQDPEKA-IHNAVAPPIYATLSTTFKQDLNEGEHGG--NLDGYDYSRSGNPTRDVLESGIAALEGAAH 94 (409)
T ss_pred hccccchhhhhcccccchh-ccccccCceecccceeecccCccccccc--cccccccccCCCCchHHHHHHHHHHhCCce
Confidence 3356999999999876432 57899999997777777765 2221111 112599999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCC
Q 009172 228 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 307 (541)
Q Consensus 228 ~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~N 307 (541)
+++++|||+|+..+++.++++|++|++.+..|++|+.+++..++++|++..++|.++++++++++++ +|++||+|+|+|
T Consensus 95 ~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~~~i~~-~t~~V~~ESPsN 173 (409)
T KOG0053|consen 95 ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKILKAIKE-NTKAVFLESPSN 173 (409)
T ss_pred EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHHHhhcc-CceEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 599999999999
Q ss_pred CCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhh
Q 009172 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHV 386 (541)
Q Consensus 308 PtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~-~~li~~l~~~~~~ 386 (541)
|++.+.||++|+++||++|+++|||+||+++++++|+.+|||||++|+|||++||+|+++|.++.+ .++..+++..+..
T Consensus 174 Pll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~ 253 (409)
T KOG0053|consen 174 PLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQED 253 (409)
T ss_pred CccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999996 8899999999999
Q ss_pred cCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH
Q 009172 387 LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL 466 (541)
Q Consensus 387 ~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~ 466 (541)
.|++++|+.+|+..|+++|+.+|++++.+|+..++++|+++|.+++|+||+|++||+|++++++++|.+|.++|.+.++.
T Consensus 254 lg~~~~p~~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~ 333 (409)
T KOG0053|consen 254 LGWCEDPFDLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNE 333 (409)
T ss_pred hcCCCCHHHHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887776888887888
Q ss_pred HHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 467 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 467 ~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
+.+.+|+++|+++..++|+|+++||+++|+.|+|+. +.+++.+.|+++++||+|||+||.+||++||.+||+.+
T Consensus 334 ~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~~mth~~-~~e~~~~~Gi~~~LVRvSVGiEd~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 334 EHAKKFYDALKLFTKAPSLGGNESLAEPPAIMTHAS-ELEEREKFGIDPNLVRVSVGIEDIEDLIKDFQQALEKA 407 (409)
T ss_pred HHHHHHHHhhhhhhcccCcCccchhhcchhhhccCC-CHHHHHhcCCCCCcEEEEeccCCHHHHHHHHHHHHHhh
Confidence 899999999999999999999999999999999999 99999999999999999999999999999999999863
No 8
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.8e-71 Score=582.73 Aligned_cols=382 Identities=29% Similarity=0.522 Sum_probs=350.4
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhccc-CCCCCCCCCchhHHHHHHHHHHHhCCCcEEE
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR-ASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~-~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~ 230 (541)
+++|+++|.|... ...+++++||||+|+||.|++.+++.+.+.+.. ..|.|+|++||+...||++||+++|++++++
T Consensus 4 ~~~t~~~~~~~~~--~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~ 81 (394)
T PRK09028 4 KKATKIVSAGRDK--KWTKGVINPPVFRASTVVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGGAGTAL 81 (394)
T ss_pred CccceeEEcCCCC--CCCCCCccCCeeCCCCcccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 4789999999433 223589999999999999999988776554332 4589999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCC
Q 009172 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (541)
Q Consensus 231 ~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG 310 (541)
++|||+|+.+++.+++++||+||++++.|+++..++...++++|+++.+++..+.+++++++++ +||+|++|+|+||+|
T Consensus 82 ~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l~~-~TklV~lespsNPtg 160 (394)
T PRK09028 82 YPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELIRP-NTKVLFLESPGSITM 160 (394)
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCC
Confidence 9999999999999999999999999999999988777777889999999988888999999987 599999999999999
Q ss_pred cccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCC
Q 009172 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 311 ~v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~ 390 (541)
.+.|+++|+++||++|+++++|++|++++.++|+++|+|++++|+|||++||+|+++|+++.++++.++++......|.+
T Consensus 161 ~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~ 240 (394)
T PRK09028 161 EVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQC 240 (394)
T ss_pred cHHHHHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988888888888777788999
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc-CCHHHH
Q 009172 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD-GDLTAT 469 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~-g~~~~~ 469 (541)
++|+++|+++++|+||..||+++++|+..+++||++||.|.+|+||+|++||+|+++++|+.|+|+|++|+++ ++.+.+
T Consensus 241 ~~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~ 320 (394)
T PRK09028 241 TSPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAV 320 (394)
T ss_pred CCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 456778
Q ss_pred HHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
.+|+++|+++.+++|||+++||+.+|+.++|... .+..|+.+++||||||+||.+|||+||++||++
T Consensus 321 ~~f~~~l~l~~~~~slG~~~sLv~~p~~~~~~~~----~~~~~~~~~liR~svGlEd~~dLi~Dl~~Al~~ 387 (394)
T PRK09028 321 TALVEGMQHFKMGFSWGGFESLILGVFGINKLRT----ATNWDFSKPLIRLHIGLEDVDDLIADLEAGFER 387 (394)
T ss_pred HHHHHhCCcceEecccCCCcceeECCCCcCccCc----hhhhcCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988776543 234778889999999999999999999999975
No 9
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.3e-70 Score=580.92 Aligned_cols=386 Identities=40% Similarity=0.656 Sum_probs=362.3
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
++.|+++|+|...+ ..++++.||||+|+||.|++.+++.+.+.++..+|.|+|+++|++++||++||+++|++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~ 85 (398)
T PRK08249 8 GVGTKAVWAGEKEY--LPYGATQVPVVLSVAYGYDDIDEWYDVALGKKPGHIYSRNTNPTVQAFEEKVRILEGAEAATAF 85 (398)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCCHHHHHHhhcCCcCCccccCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 47799999996542 2368999999999999999998777766555567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++.++|+++..++...++..|+++.+++..|++++++++++ +|++|++|+|+||+|.
T Consensus 86 ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i~~-~tklV~ie~p~NPtg~ 164 (398)
T PRK08249 86 STGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEIAK-GCDLLYLETPTNPTLK 164 (398)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhcCC-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999888777777888999999999999999999987 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~ 391 (541)
+.|+++|.++|+++|+++|+|++|+.++...++..++|++++|+||+++||++.++|+++++++++++++..+...|..+
T Consensus 165 v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~ 244 (398)
T PRK08249 165 IVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATM 244 (398)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999998877778888999999999999999999999999999999999988888889999
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009172 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~ 471 (541)
+++.+|+++++++++..|++++++|++.++++|++||.|.+|+||+|++||+|+++++|+.|+|+|++|+++++.+.+.+
T Consensus 245 s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~ 324 (398)
T PRK08249 245 DPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKR 324 (398)
T ss_pred CHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877777899
Q ss_pred HHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
|+++|+++.+++|||+++|++++|+.++|..++++.++..|+++++||||||+||++|||+||++||++
T Consensus 325 f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 393 (398)
T PRK08249 325 LLPKLRYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGIEDTEDLIADLEQAFAH 393 (398)
T ss_pred HHHhCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999985
No 10
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2.8e-70 Score=576.10 Aligned_cols=377 Identities=32% Similarity=0.542 Sum_probs=345.9
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
.++|.++|.|...+ ..+++++||||+|+||.|++.+++.. ...+|.|+|.+||+.+.||+.|+.+++++.++++
T Consensus 12 ~~~t~~~~~~~~~~--~~~~~~~~Pi~~sst~~~~~~~~~~~----~~~~y~YsR~gnPt~~~Le~~la~le~~~~~v~~ 85 (395)
T PRK05967 12 GINTRLAHDGNDPG--DYHGFVNPPVVHASTVLFPDAETMAT----RGQKYTYGTRGTPTTDALCKAIDALEGSAGTILV 85 (395)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCChHHhhc----ccCCCccCCCCChHHHHHHHHHHHHhCCCCEEEE
Confidence 36799999996542 34689999999999999999887642 2357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+|||+|+.+++.+++++||+||++++.|++++.++...++++|+++++++..+.+++++++++ +||+|++|+|+||++.
T Consensus 86 sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al~~-~TklV~lesPsNP~l~ 164 (395)
T PRK05967 86 PSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLMRP-NTKVVHTEAPGSNTFE 164 (395)
T ss_pred CcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhcCc-CceEEEEECCCCCCCc
Confidence 999999999999999999999999999999988887788899999999998888899999987 4999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~ 391 (541)
+.|+++|+++||++|+++|+|++|++++.++|+++|+|++++|++||++||+|+++|+++.++++.++++......|..+
T Consensus 165 v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~ 244 (395)
T PRK05967 165 MQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCA 244 (395)
T ss_pred HHHHHHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999888888888887777889999
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HH
Q 009172 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LT 467 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~----~~ 467 (541)
+|+++|+++++++|+..||+++++|+..+++||++||+|.+|+||+|++||+|+++++|+.|+|+|++|+++++ .+
T Consensus 245 ~p~da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~ 324 (395)
T PRK05967 245 GPDDTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKA 324 (395)
T ss_pred CHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999843 67
Q ss_pred HHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 468 ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 468 ~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
.+.+|+++|+++.+++|||+.+||++|+ .+ +.+.+...|+.+++||||||+||++|||+||++||+++
T Consensus 325 ~~~~f~~~l~l~~~~~slG~~~sLi~~~-~~-----~~~~~~~~~~~~~liRlSvGlEd~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 325 KAHAFLDALEIFGLGYSWGGYESLALHV-KL-----GDRTVAKAPYAGPVIRLQIGLEDVPDLKADLERGFAAA 392 (395)
T ss_pred HHHHHHHhCCcceEccCCCCcceeeeeC-CC-----ChhHhhhccCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 8899999999999999999999999874 33 33334446888899999999999999999999999863
No 11
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.1e-69 Score=578.08 Aligned_cols=386 Identities=35% Similarity=0.584 Sum_probs=355.8
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|+++|.|...+ ..++++.||||+|+||.|++.+++.+.+.....+|.|+|.++|+.+.||++||+++|++++++++
T Consensus 9 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~leg~~~al~~~ 86 (431)
T PRK08248 9 LETLAIHAGQEID--PTTGSRAVPIYQTTSYGFRDSEHAANLFSLKEFGNIYTRIMNPTTDVFEKRIAALEGGIGALAVS 86 (431)
T ss_pred cchhheeCCcCCC--CCCCCccCCeeCCCccccCCHHHHHhhhccccCCceeECCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 6799999996542 33689999999999999999998887766555679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
||++|+.+++.+++++||+|+++++.|++++..+...++..|+++++++..|++++++++++ ++++|++++|+||||.+
T Consensus 87 sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai~~-~tklV~l~sp~NPtG~v 165 (431)
T PRK08248 87 SGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAITD-KTKALFAETIGNPKGDV 165 (431)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCCcc
Confidence 99999999999999999999999999999988887778889999999999999999999987 59999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHH----------------
Q 009172 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL---------------- 376 (541)
Q Consensus 313 ~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~l---------------- 376 (541)
.|+++|.++|+++|+++|+|++++.+..+.++++|+|++++|+||+++|||+++||+++.+.+.
T Consensus 166 ~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~ 245 (431)
T PRK08248 166 LDIEAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDP 245 (431)
T ss_pred cCHHHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCcc
Confidence 9999999999999999999999998888888899999999999999999999999988864321
Q ss_pred -----------------HHHHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCC
Q 009172 377 -----------------VTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLK 439 (541)
Q Consensus 377 -----------------i~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~ 439 (541)
....+......|..++|+++|+++++|+|+..|++++++|+.+++++|++||.|.+|+||+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~ 325 (431)
T PRK08248 246 SYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLP 325 (431)
T ss_pred ccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC
Confidence 112223455779999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeE
Q 009172 440 SHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLV 518 (541)
Q Consensus 440 s~p~~~l~~~~~-~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~I 518 (541)
+||+|+++++|+ .|+|+||+|+|+++.+.+.+|+++|+++.+++|||+++||+++|++++|+.+++++++.+|+++++|
T Consensus 326 s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~li 405 (431)
T PRK08248 326 SHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLV 405 (431)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeE
Confidence 999999999999 6889999999987777899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHhhC
Q 009172 519 RFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 519 RlSvG~Ed~edli~dL~~AL~~i 541 (541)
|||||+||++|||+||+|||+++
T Consensus 406 RlsvGlEd~~dL~~Dl~~Al~~~ 428 (431)
T PRK08248 406 RLSVGTEAIDDILDDLRQAIRQS 428 (431)
T ss_pred EEEeccCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999863
No 12
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=5.6e-69 Score=568.13 Aligned_cols=380 Identities=33% Similarity=0.551 Sum_probs=352.5
Q ss_pred CCccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEE
Q 009172 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (541)
Q Consensus 151 ~~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~ 230 (541)
+.++|+++|.|...+ ..+++++||||+|+||.|++.++ ..+|.|+||+||+.+.|+++||+++|.+++++
T Consensus 3 ~~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~--------~~~~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~ 72 (386)
T PRK08045 3 RKQATIAVRSGLNDD--EQYGCVVPPIHLSSTYNFTGFNE--------PRAHDYSRRGNPTRDVVQRALAELEGGAGAVL 72 (386)
T ss_pred CCcccceeEcCCCCC--CCCCCccCCccCCcceecCCccc--------cCCceeeCCCCccHHHHHHHHHHHhCCCeEEE
Confidence 357899999996542 23689999999999999988542 24689999999999999999999999989999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCC
Q 009172 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (541)
Q Consensus 231 ~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG 310 (541)
++||++|+.+++.+++++||+|+++++.|++++..+.......++++.+++..|++++++++++ ++++|++|+|+||||
T Consensus 73 ~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~l~~-~tklV~l~sP~NPtG 151 (386)
T PRK08045 73 TNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAE-KPKLVLVESPSNPLL 151 (386)
T ss_pred ECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHhccc-CCeEEEEECCCCCCC
Confidence 9999999999999999999999999999999888777666667788888888899999999987 599999999999999
Q ss_pred cccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCC
Q 009172 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG 389 (541)
Q Consensus 311 ~v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~ 389 (541)
.+.|+++|.++|+++|+++|+|++|..+..+.++.+|+|++++|+|||++|++++++|+++. +++++++++......|.
T Consensus 152 ~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~ 231 (386)
T PRK08045 152 RVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGV 231 (386)
T ss_pred EecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999988888999999999999999999999999998876 57788888888888899
Q ss_pred CccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHH
Q 009172 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 469 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~ 469 (541)
.++++++|+++++|+++..|++++++|++.+++||++||.|.+|+||+|++||+|+++++|+.|+|+|++|+++++.+.+
T Consensus 232 ~~~p~~~~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~ 311 (386)
T PRK08045 232 TGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTL 311 (386)
T ss_pred CCCHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998777778
Q ss_pred HHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
.+|+++|+++.+++|||+++||+++|++++|+.++++.++..|+++++||||||+||++|||+||++||+++
T Consensus 312 ~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 383 (386)
T PRK08045 312 RRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_pred HHHHHhccceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999863
No 13
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=4.8e-69 Score=575.10 Aligned_cols=386 Identities=32% Similarity=0.482 Sum_probs=353.1
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.....+|.|+|+.+|+++.+|+.||+++|++.+++++
T Consensus 14 ~~t~~~~~~~~~~--~~~~~~~~Pi~~sstf~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~le~~la~l~g~~~~v~fs 91 (437)
T PRK05613 14 FETRSIHAGQSVD--SDTSARNLPIYQTTSYVFDSAEHAKQRFALEDLGPIYSRLTNPTVEALENRIASLEGGVHAVAFA 91 (437)
T ss_pred cchHheeCCCCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCceeeCccChHHHHHHHHHHHHhCCCeEEEeC
Confidence 6799999996542 23689999999999999999988776655455679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC-CCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd-~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
|||+|+.+++.+++++||+||+++.+|+++...+...+++.|+++++++ ..|++++++++++ +|++|++++++||+|.
T Consensus 92 SG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~-~tk~V~~e~~~Np~~~ 170 (437)
T PRK05613 92 SGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQP-NTKAFFGETFANPQAD 170 (437)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCc-cCeEEEEECCCCCCCc
Confidence 9999999999999999999999999999997777677788999999997 5689999999988 4999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHH---------------
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL--------------- 376 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~l--------------- 376 (541)
+.|+++|+++|+++|+++|+|++++.+..++++++|+|++++|+||+++|||+++||+++.++++
T Consensus 171 v~di~~I~~la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~ 250 (437)
T PRK05613 171 VLDIPAVAEVAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYF 250 (437)
T ss_pred ccCHHHHHHHHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCC
Confidence 99999999999999999999999998888899999999999999999999999999998864220
Q ss_pred --------------------H-HHHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeC
Q 009172 377 --------------------V-TQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHY 435 (541)
Q Consensus 377 --------------------i-~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~ 435 (541)
. +........+|..++|+++|+++++|+||..|++++++|+.++++||++||+|.+|+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~y 330 (437)
T PRK05613 251 VTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNF 330 (437)
T ss_pred CCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEEC
Confidence 0 1122355678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCC
Q 009172 436 PGLKSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM 514 (541)
Q Consensus 436 Pgl~s~p~~~l~~~~~-~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~ 514 (541)
|++++||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++||++||++++|..++.+.++..|++
T Consensus 331 Pgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~ 410 (437)
T PRK05613 331 AGLKDSPWYATKEKLGLKYTGSVLSFDIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGIT 410 (437)
T ss_pred CCCCCCccHHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCC
Confidence 9999999999999997 788999999998777889999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 515 DNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 515 ~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
+++||||||+||++|||+||++||+++
T Consensus 411 ~~liRlsvGlE~~~dLi~Dl~~Al~~~ 437 (437)
T PRK05613 411 QATVRLSVGIEDIDDIIADLEGGFAAI 437 (437)
T ss_pred CCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999875
No 14
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=8.7e-69 Score=568.07 Aligned_cols=386 Identities=37% Similarity=0.626 Sum_probs=359.5
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|.++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+||++|++++||++||+++|++.+++++
T Consensus 4 ~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~av~~~ 81 (391)
T TIGR01328 4 FATRAIHAGYPPK--DQFGALTPPIYQTSTFVFDSCEQGGNRFAGQESGYIYSRLGNPTVSNLEGRIAFLEGTEAAVATS 81 (391)
T ss_pred cccceeeCCccCC--CCCCCccCCcccCcceecCChHHHHHhhcCCcCCCceeCCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 6799999996542 23689999999999999999988887776556689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
||++|+.+++.+++++||+|+++.+.|++++..+...+...|+++.+++..|++++++++++ +|++|++|+|+||+|.+
T Consensus 82 sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~~~i~~-~tklV~le~p~Np~G~v 160 (391)
T TIGR01328 82 SGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVKAHIKD-NTKIVYFETPANPTMKL 160 (391)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhhcc-CCeEEEEECCCCCCCcc
Confidence 99999999999999999999999999999888887778889999999999999999999987 59999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCC
Q 009172 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA 390 (541)
Q Consensus 313 ~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~--~~~g~~ 390 (541)
.|+++|.++|+++|+++|+|++++.++..+++..|+|++++|+||++++++++++|+++++++++++++... ...|..
T Consensus 161 ~dl~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~ 240 (391)
T TIGR01328 161 IDMERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSV 240 (391)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999887788888999999999999999999988999999999998887532 245778
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009172 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~ 470 (541)
+++..+|+++++++++..|++++.+|+++++++|+++|.|.+|+||+|++||+|+++++|++++|+|++|+++++.+.+.
T Consensus 241 l~~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~ 320 (391)
T TIGR01328 241 ISPFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAK 320 (391)
T ss_pred CCcHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987677889
Q ss_pred HHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
+|+++|+++.+++|||+.+||+++|..++|..+++++++..|+++++||||||+||++|||+||++||+++
T Consensus 321 ~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 391 (391)
T TIGR01328 321 KLLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGLEDADDLIADLKQALDAL 391 (391)
T ss_pred HHHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875
No 15
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=8.4e-69 Score=573.06 Aligned_cols=385 Identities=35% Similarity=0.562 Sum_probs=353.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.++....+|.|+|+.+|+++.||++||+++|++.+++++
T Consensus 14 ~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Ysr~~~p~~~~Le~~lA~l~g~~~av~~s 91 (436)
T PRK07812 14 FETKQIHAGQTPD--PATNARALPIYQTTSYTFDDTDHAAALFGLAEPGNIYTRIMNPTQDVVEQRIAALEGGVAALLLA 91 (436)
T ss_pred cchhheeCCCCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhcCCcCCccccCCCCchHHHHHHHHHHHhCCCeEEEEc
Confidence 6799999985432 23689999999999999999988777666555678999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC-CCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID-PADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd-~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
|||+|+.+++.+++++||+||++...|++++.++...+++.|+++.+++ ..|++++++++++ +|++|++|+|+||+|.
T Consensus 92 SG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~l~~ai~~-~tklV~ie~~sNp~G~ 170 (436)
T PRK07812 92 SGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDAWRAAVRP-NTKAFFAETISNPQID 170 (436)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHHHHHhCCC-CCeEEEEECCCCCCCe
Confidence 9999999999999999999999999999998887777788899999995 6689999999987 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChH----------------
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 375 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~---------------- 375 (541)
+.|+++|.++||++|+++|||++++.++.++++++|+|++++|+||+++|||++++|+++.+..
T Consensus 171 v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~ 250 (436)
T PRK07812 171 VLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDP 250 (436)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCc
Confidence 9999999999999999999999999988889999999999999999999999999999886331
Q ss_pred --------------HHHHHH-HHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCC
Q 009172 376 --------------LVTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKS 440 (541)
Q Consensus 376 --------------li~~l~-~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s 440 (541)
++.+++ ......|..++|+++|+++++++|+..|++++++|+.+++++|++||+|.+|+||++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s 330 (436)
T PRK07812 251 SYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPS 330 (436)
T ss_pred ccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 111222 34556899999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEE
Q 009172 441 HPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR 519 (541)
Q Consensus 441 ~p~~~l~~~~~-~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IR 519 (541)
||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++.+++|||+.+||+++|+.++|..+++++++.+|+++++||
T Consensus 331 ~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liR 410 (436)
T PRK07812 331 SPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVR 410 (436)
T ss_pred CccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEE
Confidence 99999999999 78999999999877778999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHhh
Q 009172 520 FSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 520 lSvG~Ed~edli~dL~~AL~~ 540 (541)
||||+||++|||+||++||++
T Consensus 411 lSvGlEd~~dli~dl~~Al~~ 431 (436)
T PRK07812 411 LAVGIEGIDDILADLEAGFAA 431 (436)
T ss_pred EEeccCCHHHHHHHHHHHHHh
Confidence 999999999999999999985
No 16
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.6e-68 Score=569.71 Aligned_cols=386 Identities=33% Similarity=0.569 Sum_probs=353.4
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+|+++|++++||++||+++|++.++++
T Consensus 8 ~~~t~~~~~~~~~~--~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~y~R~~~p~~~~le~~lA~l~g~~~av~~ 85 (433)
T PRK08134 8 GFDTLALHAGAAPD--PATGARAVPIHLTTSFVFRDSDHAAALFNLERAGHVYSRISNPTVAVLEERVAALEGGVGAIAT 85 (433)
T ss_pred CcchhheeCCCCCC--CCCCCccCCccCCCccccCCHHHHHHhhcccccCceeecCcChHHHHHHHHHHHHhCCCcEEEe
Confidence 37799999996542 3468999999999999999999888776655678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+|||+|+++++.+++++||+||++..+|+++..++...+++.|++++++|..|+++++++|++ +||+|++++|+||+|.
T Consensus 86 sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~~~i~~-~TklV~~e~~~np~g~ 164 (433)
T PRK08134 86 ASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWRAAIRP-NTRLLFGETLGNPGLE 164 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCcccCc
Confidence 999999999999999999999999999999988876667789999999999899999999988 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChH----------------
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 375 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~---------------- 375 (541)
++|+++|+++||++|+++|+|++++.++.++++++|+|++++|+||+++|+|+++||+++....
T Consensus 165 v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~ 244 (433)
T PRK08134 165 VLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPY 244 (433)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCc
Confidence 9999999999999999999999999998888999999999999999999999999998874211
Q ss_pred ----------------HHHHH-HHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009172 376 ----------------LVTQI-RNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGL 438 (541)
Q Consensus 376 ----------------li~~l-~~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl 438 (541)
+..+. ......+|..++++++|+++++|+++..|++++++|+.+++++|++||.|.+|+||++
T Consensus 245 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l 324 (433)
T PRK08134 245 AGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPEL 324 (433)
T ss_pred ccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 00111 1223467889999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCe
Q 009172 439 KSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 517 (541)
Q Consensus 439 ~s~p~~~l~~~~~-~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~ 517 (541)
++||+|+++++++ .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++||+++|+.++|..+++++++..|+++++
T Consensus 325 ~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~l 404 (433)
T PRK08134 325 ESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGT 404 (433)
T ss_pred CCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCe
Confidence 9999999999999 789999999998767788999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHhh
Q 009172 518 VRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 518 IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
||||||+||++|||+||+|||++
T Consensus 405 iRlsvGlE~~~dli~dl~~Al~~ 427 (433)
T PRK08134 405 IRLSIGLEDADDLIDDLKRALKA 427 (433)
T ss_pred EEEEeccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999985
No 17
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=3.1e-68 Score=568.50 Aligned_cols=385 Identities=35% Similarity=0.561 Sum_probs=352.1
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|+++|.|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|+++|+.++||++||+++|.+.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~g~~~~l~~s 80 (425)
T PRK06084 3 LETLAIHAGYSPD--PTTKAVAVPIYQTTSYAFDDTQHGADLFDLKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAVA 80 (425)
T ss_pred cchhheeCCcCCC--CCCCCccCCEeCCCCcccCCHHHHHHhhccccCCccccCCCCchHHHHHHHHHHHhCCCceeEeh
Confidence 5688999985432 23689999999999999999988887765555679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
||++|+.+++.+++++||+|+++.+.|++++..+...++..|+++.+++..|++++++++++ ++++|++|+|+||+|.+
T Consensus 81 sG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~-~tklV~lesp~NPtG~v 159 (425)
T PRK06084 81 SGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDE-RTKAVFCESIGNPAGNI 159 (425)
T ss_pred hHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhcc-CCcEEEEeCCCCCCCee
Confidence 99999999999999999999999999999888777667778999999998899999999987 59999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHH--H-------------
Q 009172 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL--V------------- 377 (541)
Q Consensus 313 ~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~l--i------------- 377 (541)
.|+++|.++|+++|++||+|++++.+..++++.+|+|++++|+||+++||++++||+++.+... .
T Consensus 160 ~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~ 239 (425)
T PRK06084 160 IDIQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPD 239 (425)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCC
Confidence 9999999999999999999999999988889999999999999999999999999998864321 0
Q ss_pred ------------------HH-HHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009172 378 ------------------TQ-IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGL 438 (541)
Q Consensus 378 ------------------~~-l~~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl 438 (541)
.. .......+|..++|+++|+++++++++..|++++++|+.+++++|++||+|.+|+||++
T Consensus 240 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l 319 (425)
T PRK06084 240 PSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGL 319 (425)
T ss_pred cccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 00 11223467899999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhhcCC-cccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCe
Q 009172 439 KSHPEHHIATQQMTG-FGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 517 (541)
Q Consensus 439 ~s~p~~~l~~~~~~g-~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~ 517 (541)
++||+|+++++|+.| +|+|++|+++++.+.+.+|+++|+++.+++|||+++||+++|..++|..++++++++.|+++++
T Consensus 320 ~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~l 399 (425)
T PRK06084 320 PDHPEHELARRYMGGKPASILSFGIKGGQAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDM 399 (425)
T ss_pred CCcccHHHHHHhCCCCcceEEEEEecCCHHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCe
Confidence 999999999999987 8999999998776778899999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHhh
Q 009172 518 VRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 518 IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
||||||+||++|||+||++||++
T Consensus 400 iR~svGlEd~~dLi~dl~~Al~~ 422 (425)
T PRK06084 400 VRLSIGIEHIDDIIADLAQALDA 422 (425)
T ss_pred EEEEeccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999985
No 18
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=4.8e-68 Score=564.02 Aligned_cols=383 Identities=36% Similarity=0.577 Sum_probs=357.3
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
+++|+++|+|... . .+++++||||+++||.|++.+++.+.+.+....|.|+||+||+.++||++||+++|+++++++
T Consensus 15 ~~~t~~~~~~~~~--~-~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~al~~ 91 (403)
T PRK07810 15 SQATIGVRGGLLR--S-GFEETAEALYLTSGYVYESAAAAEAAFTGELDRFVYSRYGNPTVSMFEERLRLIEGAEACFAT 91 (403)
T ss_pred CcchhheeCCCCC--C-CCCCccCCccCCCccccCCHHHHHHHhccCcCCcceeCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 4689999999543 2 368899999999999999998877666555567899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+|||+|+..++.+++++||+|+++...|++++..+...++..|+++++++..|++++++++++ +|++|++|+|+||+|.
T Consensus 92 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~-~tklV~~esp~Nptg~ 170 (403)
T PRK07810 92 ASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWEEALSV-PTQAVFFETPSNPMQS 170 (403)
T ss_pred CChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCe
Confidence 999999999999999999999999999999988887778889999999999999999999987 4999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHH-HHHHHhhhcCCC
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGA 390 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~-~l~~~~~~~g~~ 390 (541)
+.|+++|.++|+++|++||+|++|+.++.++++..|+|++++|+||+++|||+++||+++++++.+. +++.+....|..
T Consensus 171 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~ 250 (403)
T PRK07810 171 LVDIAAVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPA 250 (403)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998888889999999999999999999999999999887664 566666778889
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC----CH
Q 009172 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DL 466 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g----~~ 466 (541)
++++.+|+++++|+++..|++++.+|+.+++++|++||.|.+|+||++++||+|+++++|+.|+|+|++|++++ +.
T Consensus 251 ~s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~ 330 (403)
T PRK07810 251 LSAFNAWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAK 330 (403)
T ss_pred CCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986 46
Q ss_pred HHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 467 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 467 ~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
+.+.+|+++|+++.+++|||+.+|++++|..++|..++.+.+...|+++++||||+|+|+++|||+||++||
T Consensus 331 ~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGlE~~~dli~dl~~Al 402 (403)
T PRK07810 331 KRAFEVLDKLRVIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGLEDTDDLIADLDRAL 402 (403)
T ss_pred HHHHHHHHhCCceEEeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHhh
Confidence 778899999999999999999999999999999999999999999999999999999999999999999998
No 19
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=2.1e-67 Score=555.73 Aligned_cols=378 Identities=34% Similarity=0.595 Sum_probs=350.0
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
.++|+++|.|...+ ..+++++||||++++|.|++.. +..+|.|+||+||+.++|+++||+++|++.++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~Y~R~~~p~~~~le~~lA~l~g~~~v~~~ 72 (382)
T TIGR02080 3 KQATIAVRSGLNSD--TQYGCVVPPIYLSTTYNFTGFN--------EPRAYDYSRSGNPTRDLLQQALAELEGGAGAVVT 72 (382)
T ss_pred CcccceeecCCCCC--CCCCCccCCeeCCceeEeCCcC--------ccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEE
Confidence 46899999986542 2368999999999999987632 1236889999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++.++|++++..+..++...++++.+++..|++++++++++ +||+|++|+|+||||.
T Consensus 73 ~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~-~tklV~l~~p~NPtG~ 151 (382)
T TIGR02080 73 NTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQ-KPKLVLIETPSNPLLR 151 (382)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCE
Confidence 999999999999999999999999999999888777666777889999888899999999987 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~~ 390 (541)
+.|+++|.++|+++|+++|+|++|+.+..+.++..|+|++++|+||+++|++++++|+++. +++++++++.++...|..
T Consensus 152 ~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~ 231 (382)
T TIGR02080 152 VVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVT 231 (382)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999887778888899999999999999999999999876 567888888888888999
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009172 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~ 470 (541)
++|+.+|+++++++++..|++++.+|+..+++||++||.|.+|+||+|++||+|+++++|+.|+|+|++|+++++.+.+.
T Consensus 232 ~sp~~a~l~lr~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~ 311 (382)
T TIGR02080 232 GGAFDSYLTLRGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVR 311 (382)
T ss_pred CCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987667788
Q ss_pred HHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+|+++|+++.+++|||+++|++++|++++|..+++++++..|+++++||||||+||++|||+||++||++
T Consensus 312 ~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 312 RFLGGLSLFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGLEDADDLIADLEQGLRA 381 (382)
T ss_pred HHHHcCCcceEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 20
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=2.7e-67 Score=556.65 Aligned_cols=384 Identities=36% Similarity=0.622 Sum_probs=359.2
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|+++|.|... ..++++.+|||++++|.|++.++....+.+...++.|+|+.+|+.++||++||+++|++++++++
T Consensus 7 ~~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~v~~s 83 (390)
T PRK08133 7 FDTLAVRAGQLR---SPFGEHSEALFLTSSFVFESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALEGAEACVATA 83 (390)
T ss_pred cchhheeCCCCC---CCCCCccCCccCCCCcccCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 679999999643 23688999999999999999887776655555578899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
||++|+.+++.+++++||+||++++.|++++..+...++..|+++++++..|++++++++++ +||+|++|+|+||+|.+
T Consensus 84 sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~-~tklV~ie~p~NptG~v 162 (390)
T PRK08133 84 SGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRP-NTKLFFLETPSNPLTEL 162 (390)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCCc
Confidence 99999999999999999999999999999998887777888999999999999999999987 59999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCcc
Q 009172 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN 392 (541)
Q Consensus 313 ~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s 392 (541)
.|+++|.++|+++|+++|+|++++.+..+.++..|+|++++|+||+++|+++++||++++++++++++.......|..++
T Consensus 163 ~dl~~I~~la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~ 242 (390)
T PRK08133 163 ADIAALAEIAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLS 242 (390)
T ss_pred CCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999988888888889999999999999999999999999999888888877778898999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHH
Q 009172 393 PNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 472 (541)
Q Consensus 393 ~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~ 472 (541)
++.+|+++++++++..|++++.+|+..++++|+++|.|.+|+||+|+++|+|+++++|+.|+|+|++|+++++.+.+.+|
T Consensus 243 ~~~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f 322 (390)
T PRK08133 243 PFNAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRV 322 (390)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998777788999
Q ss_pred HHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 473 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 473 l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+++|+++.+++|||+++|++++|++++|..++++.++..|+++++||||||+||.+|||+||++||+.
T Consensus 323 ~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 390 (390)
T PRK08133 323 IDATRLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGLEDVADIKADLARGLAA 390 (390)
T ss_pred HHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999973
No 21
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=3.4e-67 Score=561.19 Aligned_cols=386 Identities=33% Similarity=0.553 Sum_probs=352.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhc----------ccCCCCCCCCCchhHHHHHHHHHHH
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEK----------RRASFEYGRYGNPTTVVVEEKMSAL 222 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~----------~~~~~~Y~R~~~p~~~~Le~~LA~l 222 (541)
++|.++|.|... ...+++++||||+|+||.|++.+++.+.+.. ...+|.|+||+||+...||++||++
T Consensus 18 ~~t~~~~~~~~~--~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~Pt~~~Le~~lA~l 95 (427)
T PRK07049 18 PETQMLNYGYDP--ELSEGAVKPPVFLTSTFVFRSAEDGRDFFDYVSGRKEPPAGEGAGLVYSRFNHPNSEIVEDRLAVY 95 (427)
T ss_pred cccceeeCCCCC--CCCCCCccCCccCccceecCChHHHHhhhhccccccccccccccCccccCCCCcCHHHHHHHHHHH
Confidence 678999998543 2236899999999999999999887765422 1346899999999999999999999
Q ss_pred hCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcE-EEEeCCCCHHHHHHhcc----CCCe
Q 009172 223 EGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT-ATVIDPADMEGLEAALN----NNNV 297 (541)
Q Consensus 223 ~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~-v~~vd~~dle~Le~ai~----~~~t 297 (541)
+|.+++++++||++|+.+++.+++++||+|+++.+.|+++..++...++.+|++ +.+.+..|+++++++++ ..++
T Consensus 96 eg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~t 175 (427)
T PRK07049 96 EGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRV 175 (427)
T ss_pred hCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCc
Confidence 999999999999999999999999999999999999999987776667788998 45555667888877664 2359
Q ss_pred eEEEEeCCCCCCCcccCHHHHHHHHHh------CCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEE
Q 009172 298 SLFFTESPTNPFLRCVDVKLVSDLCHK------KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS 371 (541)
Q Consensus 298 klV~lesp~NPtG~v~di~~Ia~la~~------~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv 371 (541)
|+||+|+|+||||.++|+++|.+++++ +++++|+||+|.+++.+.++..|+|++++|+||+++|++++++|+++
T Consensus 176 klv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~G~vv 255 (427)
T PRK07049 176 SLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVL 255 (427)
T ss_pred eEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEEEEEE
Confidence 999999999999999999999999987 89999999999988878888889999999999999999999999999
Q ss_pred eChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC--CCCchhhhHhh
Q 009172 372 GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGL--KSHPEHHIATQ 449 (541)
Q Consensus 372 ~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl--~s~p~~~l~~~ 449 (541)
+++++++.++..+..+|..++++.+|+++++++++..|++++.+|++.++++|++||+|.+|+||++ ++||+|+++++
T Consensus 256 ~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~ 335 (427)
T PRK07049 256 GRKALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKR 335 (427)
T ss_pred CCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHh
Confidence 9999999999888888999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred hcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009172 450 QMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 529 (541)
Q Consensus 450 ~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~ed 529 (541)
||.|+|+|++|+++++.+.+.+|+++|+++.+++|||+++||+++|..++|..++++++...|+++++||||||+||++|
T Consensus 336 ~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~d 415 (427)
T PRK07049 336 QCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGIEHPDD 415 (427)
T ss_pred hCCCCccEEEEEEcCCHHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHH
Confidence 99999999999998777788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 009172 530 LKADVLQALHA 540 (541)
Q Consensus 530 li~dL~~AL~~ 540 (541)
||+||++||++
T Consensus 416 l~~dl~~al~~ 426 (427)
T PRK07049 416 LIADLAQALDA 426 (427)
T ss_pred HHHHHHHHHhc
Confidence 99999999975
No 22
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=4.1e-67 Score=556.50 Aligned_cols=385 Identities=36% Similarity=0.593 Sum_probs=356.7
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|+++|.|... ..++++.+|||++++|.|++.+++.+.+.+...+|.|+||++|+.++||++||+++|++.+++++
T Consensus 11 ~~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~~~~~ 87 (398)
T PRK07504 11 PATRLVHSGTLR---SQFGETSEALFLTQGFVYDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDARATA 87 (398)
T ss_pred cccceeeCCCCC---CCCCCCcCCeECCCCccCCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCeeeEec
Confidence 679999999632 23678999999999999999887766665556689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
||++|+..++.+++++||+|+++.+.|+++...+...++..|+++++++..|++++++++++ +||+|++|+|+||+|.+
T Consensus 88 sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~ai~~-~tklV~lesp~NptG~v 166 (398)
T PRK07504 88 SGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWEKAVRP-NTKVFFLESPTNPTLEV 166 (398)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCcEe
Confidence 99999998888889999999999999999887776667788999999998899999999987 59999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHH-HHHHHhhhcCCCc
Q 009172 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVT-QIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~-~l~~~~~~~g~~~ 391 (541)
.|+++|.++|+++|+++|+|++|+.+..+.+..+|+|++++|+||+++|+|+.+||+++++++++. .++......|..+
T Consensus 167 ~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~ 246 (398)
T PRK07504 167 IDIAAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSL 246 (398)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999887788888999999999999999999999999999887765 4666666788899
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009172 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~ 471 (541)
+++.+++++++++++..|++++.+|+++++++|++||+|.+|+||++++||+|+++++||+|+|+|++|+++++.+.+.+
T Consensus 247 s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~ 326 (398)
T PRK07504 247 SPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFR 326 (398)
T ss_pred CHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877788899
Q ss_pred HHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
|+++|+++.+++|||+++||+++|+.++|..++++.++..|+++++||||||+||++|||+||++||+++
T Consensus 327 ~~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 396 (398)
T PRK07504 327 FLNALKIVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGLEDTDDLIEDLAAALKKV 396 (398)
T ss_pred HHHhCCcceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999863
No 23
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=3.3e-67 Score=554.72 Aligned_cols=380 Identities=36% Similarity=0.582 Sum_probs=347.2
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
.+|..+|.|... ..+++++||||+|+||.|++.+. +.++..+|.|+|++||++++||+++|+++|++++++++
T Consensus 3 ~~t~~~~~~~~~---~~~~~~~~pi~~~st~~~~~~~~----~~~~~~~~~y~r~~np~~~~lE~~lA~l~g~~~~l~~~ 75 (385)
T PRK08574 3 RGTDAVRGYRGS---DPYGSLQPPIYLTALFRQEGEAY----PSDRGFDLKYSREENPTLRPLEEALAKLEGGVDALAFN 75 (385)
T ss_pred ccceeeecCCCC---CCCCCccCCccCCcceecCcchh----hcCCcCCceEECCCCccHHHHHHHHHHHhCCCcEEEeC
Confidence 468889987443 23689999999999999877532 22334579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
||++|+..++.+++++||+|+++.+.|+++...+... ...|+++.+++. |++++++++++++||+|++|+|+||+|.+
T Consensus 76 sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~-d~~~l~~~i~~~~tklV~ie~p~NPtG~v 153 (385)
T PRK08574 76 SGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYP-STEDIIEAIKEGRTKLVFIETMTNPTLKV 153 (385)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECC-CHHHHHHhcCccCceEEEEECCCCCCCEe
Confidence 9999999999999999999999999999988777553 678999988765 68999999986359999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEE-eChHHHHHHHHHhhhcCCCc
Q 009172 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv-~~~~li~~l~~~~~~~g~~~ 391 (541)
+|+++|.++|+++|+++|+|++++.++.++++..|+|++++|+||+++||++++||+++ .++++.++++.++..+|..+
T Consensus 154 ~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~ 233 (385)
T PRK08574 154 IDVPEVAKAAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIM 233 (385)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999998888888999999999999999999999999555 56788888888777789999
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcC--CcccEEEEEEcCCHHHH
Q 009172 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMT--GFGGVVSFEVDGDLTAT 469 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~--g~g~~vsf~l~g~~~~~ 469 (541)
+|+.+|+++++++++..|++++.+|+.+++++|+++|.|.+|+||+|++||+|+++++||. |+|+|++|+++++.+.+
T Consensus 234 ~p~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~ 313 (385)
T PRK08574 234 QPFEAYLVLRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAV 313 (385)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999996 69999999998777889
Q ss_pred HHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
.+|+++|+++.+++|||+.+||+++|+.++|..+++++++..|+++++||||||+||++|||+||++||++|
T Consensus 314 ~~~~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~ 385 (385)
T PRK08574 314 LKFLRSLKLIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGLEDVEDLIEDLDQALGSI 385 (385)
T ss_pred HHHHHcCCcceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999875
No 24
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-67 Score=555.76 Aligned_cols=370 Identities=36% Similarity=0.609 Sum_probs=340.4
Q ss_pred CCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc
Q 009172 168 IVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP 247 (541)
Q Consensus 168 ~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~ 247 (541)
+.+++++||||+|+||.|++.+++.+.+.+...+|.|+|++||++++||++||+++|++.+++++|||+|+..++.++++
T Consensus 5 ~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~ 84 (397)
T PRK05939 5 IEHGAVHKPIHTSVTYGYEDARDLIDVFQGKKPGFTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLR 84 (397)
T ss_pred CCCCCccCCccCCCCeecCCHHHHHHhhcCCcCCCCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcC
Confidence 34689999999999999999988887776655679999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCC
Q 009172 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA 327 (541)
Q Consensus 248 ~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gi 327 (541)
+||+||++++.|+++..++.. ++..|+++++++..|++++++++++ +|++|++++|+||+|.+.|+++|+++||++|+
T Consensus 85 ~Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~v~~~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi 162 (397)
T PRK05939 85 AGDHLVSSQFLFGNTNSLFGT-LRGLGVEVTMVDATDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGL 162 (397)
T ss_pred CCCEEEECCCccccHHHHHHH-HHhcCCEEEEECCCCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCC
Confidence 999999999999998777644 6778999999999999999999987 59999999999999999999999999999999
Q ss_pred EEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChH--------H-------------HHHHH-HHhh
Q 009172 328 IVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------L-------------VTQIR-NLHH 385 (541)
Q Consensus 328 llvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~--------l-------------i~~l~-~~~~ 385 (541)
++|+|++|+.+..+++...|+|++++|+||+++|||++++|+++.+.. + +.+++ ....
T Consensus 163 ~livD~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (397)
T PRK05939 163 LYVVDNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLR 242 (397)
T ss_pred EEEEECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHH
Confidence 999999999888888989999999999999999999999998875321 1 11222 2334
Q ss_pred hcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC
Q 009172 386 VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD 465 (541)
Q Consensus 386 ~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~ 465 (541)
.+|..++|+++|+++++++|+..|++++++|+.++++||++||+|.+|+||+|++||+|+++++++.|+|+|++|+++++
T Consensus 243 ~~G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~ 322 (397)
T PRK05939 243 DMGATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADG 322 (397)
T ss_pred hcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999854
Q ss_pred HHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 466 LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 466 ~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
..+.+|+++++++.+++|||+++||+++|+.++|..++++.++..|+++++||||||+||++|||+||++||++
T Consensus 323 -~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGlEd~~dLi~dl~~Al~~ 396 (397)
T PRK05939 323 -IDCFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGIEDEADLIADFEQALDA 396 (397)
T ss_pred -HHHHHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHhc
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999975
No 25
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=5.9e-67 Score=551.85 Aligned_cols=376 Identities=37% Similarity=0.653 Sum_probs=348.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|..+|+|...+ ..+++++||||+|+||.|++.+ +..+|.|+|+++|+...||+++|+++|++.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~la~l~g~~~al~~~ 72 (380)
T PRK06176 3 MQTKLIHGGISED--TTTGAVSVPIYQTSTYRQDAIG--------RPKGYEYSRSGNPTRFALEELIADLEGGVKGFAFA 72 (380)
T ss_pred ccceeeECCCCCC--CCCCCccCCcccCCceecCCCC--------CcCCCcccCCCChhHHHHHHHHHHHhCCCCEEEEC
Confidence 5688999996542 3368999999999999988732 23579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
|||.|+.+++ .++++||+|+++++.|++++..+...++..|++++++|..|++++++++++ +|++|++|+|+||+|.+
T Consensus 73 SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~ 150 (380)
T PRK06176 73 SGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAIKP-NTKALYLETPSNPLLKI 150 (380)
T ss_pred CHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhcCc-CceEEEEECCCCCCcee
Confidence 9999998666 578999999999999999988887778889999999999999999999987 59999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009172 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~-~~li~~l~~~~~~~g~~~ 391 (541)
.|+++|.++||++|+++|+|++|+.++..++..+|+|++++|++|+++||+++++|+++.+ +++.++++..+...|..+
T Consensus 151 ~di~~I~~la~~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~ 230 (380)
T PRK06176 151 TDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVL 230 (380)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998887888899999999999999999999999988875 567788888777788889
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009172 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~ 471 (541)
++..+|+++++++++..|++++++|+.++++||+++|.|.+|+||+|++||+|+++++|+.|+|+|++|++++ .+.+.+
T Consensus 231 ~~~~~~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~ 309 (380)
T PRK06176 231 GPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN-DSEAVA 309 (380)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999985 578899
Q ss_pred HHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
|+++|+++.+++|||+++||+++|+.++|..+++++++..|+++++||||||+||++|||+||++||+++
T Consensus 310 f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 310 FVESLKLFILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKI 379 (380)
T ss_pred HHHcCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999864
No 26
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=7.4e-67 Score=555.41 Aligned_cols=385 Identities=38% Similarity=0.598 Sum_probs=359.3
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|.++|.|...+ ..+++++||||+|+||.|++.+++.+.+.++..+|.|+|+++|+.++||++||+++|++.+++++
T Consensus 10 ~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~~ 87 (403)
T PRK07503 10 FSTRAIHHGYDPL--DHGGALVPPVYLTATFAFPTAEYGAECFAGEEEGHFYSRISNPTLALLEQRMASLEGGEAAVALA 87 (403)
T ss_pred ccchheeCCCCCC--CCCCCccCCcccCcceecCChHHHHHhhccccCCceeeCCCCchHHHHHHHHHHHhCCCcEEEEc
Confidence 6799999996542 23689999999999999999999888776666689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
||++|+.+++.+++++||+||++.+.|+.++.++...+...|+++++++..|++++++++++ +||+|++|+|+||+|.+
T Consensus 88 sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~-~tklV~le~p~NPtG~~ 166 (403)
T PRK07503 88 SGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALKAAISD-KTRMVYFETPANPNMRL 166 (403)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHHHhcCc-cCcEEEEeCCCCCCCee
Confidence 99999999999999999999999999998887776677888999999999999999999987 59999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH--HhhhcCCC
Q 009172 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHHVLGGA 390 (541)
Q Consensus 313 ~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~--~~~~~g~~ 390 (541)
.|+++|.++|+++|+++|+|++|+.++...++..|+|++++|+||+++|++++++|+++++++++++++. .....|..
T Consensus 167 ~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~ 246 (403)
T PRK07503 167 VDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAV 246 (403)
T ss_pred eCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCC
Confidence 9999999999999999999999998877788888999999999999999999999999998998888874 35566888
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009172 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~ 470 (541)
++++.+++++++|+++..|++++.+|+..++++|++||.|.+|+||++++||+|+++++|+.++|+|++|+++++.+.+.
T Consensus 247 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~ 326 (403)
T PRK07503 247 MSPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGR 326 (403)
T ss_pred CCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987777889
Q ss_pred HHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+|+++|+++.+++|||+++|++++|.+++|..+++++++..|+++++||||||+||++|||+||++||++
T Consensus 327 ~~~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~Al~~ 396 (403)
T PRK07503 327 RFMNALQLFARAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGLEDVADILADLAQALDA 396 (403)
T ss_pred HHHHhCCcceeecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999975
No 27
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=1.4e-66 Score=547.87 Aligned_cols=375 Identities=28% Similarity=0.508 Sum_probs=340.2
Q ss_pred ccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeCCH
Q 009172 155 SLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASG 234 (541)
Q Consensus 155 t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG 234 (541)
|+++|.|...+ ..+++++||||+|+||.|++.++.. ....+|.|+|.+||++..||++||+++|++++++++||
T Consensus 1 t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~----~~~~~~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG 74 (377)
T TIGR01324 1 TRLIHSGRQPR--FSQGSVNPPLQRASTVLFDSHAAQR----RAKGELTYGRRGTLTHFALQDAMCELEGGAGCYLYPSG 74 (377)
T ss_pred CeeEECCCCCC--CCCCCccCCeeCCCceeeCChhhhc----CCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEECcH
Confidence 56789885432 2368999999999999999865432 23457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC
Q 009172 235 MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 314 (541)
Q Consensus 235 ~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d 314 (541)
++|+.+++.+++++||+||++++.|+++..++...++.+|+++.+++..+.+++++++++ +||+|++|+|+||+|.+.|
T Consensus 75 ~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~~~i~~-~tklV~lesp~Np~g~~~d 153 (377)
T TIGR01324 75 LAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIATLIQP-NTKVLFLEAPSSITFEIQD 153 (377)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCcHHH
Confidence 999999999999999999999999999887776667778999999987766899999987 5999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHH
Q 009172 315 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPN 394 (541)
Q Consensus 315 i~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~ 394 (541)
+++|+++|+++|+++|+|++|+.++.++++++|+|++++|++|+++||+|+++|+++++++.+++++.....+|..++|+
T Consensus 154 l~~I~~la~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~ 233 (377)
T TIGR01324 154 IPAIAKAARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDAD 233 (377)
T ss_pred HHHHHHHHHHcCCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHH
Confidence 99999999999999999999999988899999999999999999999999999999999988888887777889999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-CHHHHHHHH
Q 009172 395 AAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFI 473 (541)
Q Consensus 395 ~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g-~~~~~~~~l 473 (541)
.+|+++++++++..|++++++|+.+++++|++||.|.+|+||+|++||+|+++++|+.|+|+|++|++++ +.+.+.+|+
T Consensus 234 ~a~~~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~ 313 (377)
T TIGR01324 234 DAYTTLRGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFL 313 (377)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986 567889999
Q ss_pred HHcCCCceeecCCCcccceecCc-ccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 474 DALKIPYIAPSFGGCESIVDQPA-IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 474 ~~L~~~~iavS~G~~~sl~~~pa-~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
++|+++++++|||+++|++++|. .++|.. +...|+.+++||||||+||++|||+||++||++|
T Consensus 314 ~~l~~~~~~~slG~~~sl~~~~~~~~~~~~-----~~~~~~~~~liR~svGlE~~~dl~~dl~~al~~~ 377 (377)
T TIGR01324 314 DHLQLFGLGYSWGGYESLALCNQPELGHRP-----NIKRNLEGPLIRVHIGLENVDDLKADLKAGFEAI 377 (377)
T ss_pred HhCCcceEeccCCCccceeecCCCCCCHHH-----HHhccCCCCEEEEEeCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999997322 455543 4467888899999999999999999999999876
No 28
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.5e-66 Score=552.70 Aligned_cols=378 Identities=36% Similarity=0.592 Sum_probs=350.1
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
+++|+++|.|...+ ..+++++||||++++|.|++.. ...+|.|+|+++|+.++|+++||+++|+++++++
T Consensus 12 ~~~t~~~~~~~~~~--~~~~~~~~pi~~ss~~~~~~~~--------~~~~~~y~R~~~p~~~~Le~~lA~l~g~~~~v~~ 81 (405)
T PRK08776 12 SAATAAVRAGIDRD--TAYGAVTPPIVLSSNFSFDGFG--------NKRQYDYTRSGNPTRDLLGEALAELEGGAGGVIT 81 (405)
T ss_pred CccchheeCCCCCC--CCCCCccCCEeccceEEeCCCC--------cccCCcccCCCChHHHHHHHHHHHHhCCCceEEE
Confidence 47789999996542 3468999999999999988732 1236899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++.+.|+++..++...++..|+++..++..|++++++++++ +||+|++|+|+||+|.
T Consensus 82 ~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~-~tklV~l~~P~NPtG~ 160 (405)
T PRK08776 82 ATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADALAQ-SPKLVLIETPSNPLLR 160 (405)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCc
Confidence 999999999999999999999999999999888777777778999999998899999999987 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~~ 390 (541)
+.|+++|.++|+++|+++|+|++|+.+..+.++.+|+|++++|+||+++|++++++|+++. ++++.++++......|..
T Consensus 161 v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~ 240 (405)
T PRK08776 161 ITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLT 240 (405)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999887778888999999999999999999988998876 567888888777777888
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009172 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~ 470 (541)
++++.+|++++++++++.|++++.+|+..++++|+++|.|.+|+||++++||+|+++++++.|+|+|++|+++++.+.+.
T Consensus 241 ~s~~~a~l~~~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~ 320 (405)
T PRK08776 241 GSPFDAFLTLRGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVR 320 (405)
T ss_pred CCHHHHHHHHhhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999987777889
Q ss_pred HHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+|+++|+++.+++|||+.+||+++|+.++|..++++.++..|+++++||||||+||++|||+||++||++
T Consensus 321 ~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~ 390 (405)
T PRK08776 321 AFVDGLRYFTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLAR 390 (405)
T ss_pred HHHHhCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 29
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=2.5e-66 Score=547.80 Aligned_cols=380 Identities=39% Similarity=0.636 Sum_probs=355.0
Q ss_pred cccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeCC
Q 009172 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 233 (541)
Q Consensus 154 ~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sS 233 (541)
.|.++|.|... ..++++.+|||++++|.|++.+++.+.+.+...+|.|+||++|+..+||++|++++|++.+++++|
T Consensus 1 ~t~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~~~~~s 77 (380)
T TIGR01325 1 ATLAIRGGKER---TEFREHAEALFLTSSFVYDSAAHAADRFAGEIPGFVYSRYANPTVAAFEERIAALEGAERAVATAT 77 (380)
T ss_pred CceeEECCCCC---CCCCCccCCeeCCcceecCCHHHHHHhhccccCCcceecCCCchHHHHHHHHHHHhCCCcEEEECC
Confidence 36788998633 236889999999999999998877666655556799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCccc
Q 009172 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 313 (541)
Q Consensus 234 G~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~ 313 (541)
|++|+.+++.+++++||+|+++.+.|++++..+...++.+|+++.+++..|++++++++++ ++++|++|+|+||+|.+.
T Consensus 78 G~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~-~tklV~le~p~np~g~~~ 156 (380)
T TIGR01325 78 GMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKP-NTKLVFVETPSNPLGELV 156 (380)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCeee
Confidence 9999999999999999999999999999888887778889999999999899999999987 599999999999999999
Q ss_pred CHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccH
Q 009172 314 DVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP 393 (541)
Q Consensus 314 di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~ 393 (541)
|+++|.++|+++|+++|+|++|+.+..++++..|+|++++|+||+++|+++++||++++++++++.++.....+|..+++
T Consensus 157 dl~~I~~la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p 236 (380)
T TIGR01325 157 DIAALAELAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSP 236 (380)
T ss_pred CHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCH
Confidence 99999999999999999999999887788888999999999999999999999999999999999888877778999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHH
Q 009172 394 NAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFI 473 (541)
Q Consensus 394 ~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l 473 (541)
+.+++++++++++..|++++.+++++++++|++||.|.+|+||+++++|+|+++++||.|+|+|++|+|+ +.+.+.+|+
T Consensus 237 ~~a~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~-~~~~~~~f~ 315 (380)
T TIGR01325 237 FNAWVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA-DRAAAWKVL 315 (380)
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-CHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 667889999
Q ss_pred HHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 474 DALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 474 ~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
++|+++.+++|||+++|++.||++++|..+++++++..|+.+++||||||+||++|||+||++||
T Consensus 316 ~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al 380 (380)
T TIGR01325 316 DAVELVSITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVGLEDVDDLIADLKRAL 380 (380)
T ss_pred HcCCcceEcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999986
No 30
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=3.3e-66 Score=553.81 Aligned_cols=386 Identities=31% Similarity=0.494 Sum_probs=351.9
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
+++|+++|.|...+ ..+++++||||++++|.|++.+++...++.+..++.|+|.++|+...||++||+++|.+.++++
T Consensus 7 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~al~~ 84 (427)
T PRK05994 7 GFATLAVHAGAQPD--PTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRITNPTNAVLEERVAALEGGTAALAV 84 (427)
T ss_pred CcchhheECCcCCC--CCCCCccCCCcCCCCcccCCHHHHHHhhccccCCcceECCCCccHHHHHHHHHHHhCCCcEEEE
Confidence 36799999995442 2358999999999999999988877666544456899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+|||+|+.+++.+++++||+||++.+.|+++...+...+...|+++++++..|++++++++++ +|++|++|+|+||+|.
T Consensus 85 ~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~-~tklV~vesp~NptG~ 163 (427)
T PRK05994 85 ASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAITP-RTKAIFIESIANPGGT 163 (427)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCe
Confidence 999999999999999999999999999999888777777888999999999999999999987 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChH----------------
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK---------------- 375 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~---------------- 375 (541)
++|+++|.++|+++|+++|+|+++++++.++++++|+|++++|+||+++||++++||+++....
T Consensus 164 v~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~ 243 (427)
T PRK05994 164 VTDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPR 243 (427)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCc
Confidence 9999999999999999999999999998889999999999999999999999999998885221
Q ss_pred -------HHHH----------HHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCC
Q 009172 376 -------LVTQ----------IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGL 438 (541)
Q Consensus 376 -------li~~----------l~~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl 438 (541)
+.+. ........|..++|+.+|+++++|+++..|++++++|+.+++++|++||+|.+|+||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l 323 (427)
T PRK05994 244 PEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGL 323 (427)
T ss_pred chhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 1111 11234467889999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCe
Q 009172 439 KSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNL 517 (541)
Q Consensus 439 ~s~p~~~l~~~~~-~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~ 517 (541)
++||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++||+++|+.++|..+++++++..|+++++
T Consensus 324 ~~~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~l 403 (427)
T PRK05994 324 PDDPYHALAQKYSPKGAGAVFTFGLKGGYEAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDV 403 (427)
T ss_pred CCCccHHHHHHhcCCCceEEEEEEecCCHHHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCc
Confidence 9999999999997 789999999998777888999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHHhh
Q 009172 518 VRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 518 IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
||||||+||++|||+||++||++
T Consensus 404 iRlsvGlE~~~dli~dl~~Al~~ 426 (427)
T PRK05994 404 VRLSIGIEDVDDIIADLEQALAK 426 (427)
T ss_pred EEEEeccCCHHHHHHHHHHHHhh
Confidence 99999999999999999999985
No 31
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=5.7e-66 Score=548.29 Aligned_cols=386 Identities=36% Similarity=0.615 Sum_probs=357.7
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|+++|.|...+ ..++++++|||++++|.|++.+++.+.+..+..+|.|+||++|+..+||++||+++|.+++++++
T Consensus 9 ~~t~~~~~~~~~~--~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~iA~~~g~~~~l~~~ 86 (400)
T PRK06234 9 FATKAIHGGHIGD--KQFGSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGEAAVVAA 86 (400)
T ss_pred ccchheECCCCCC--CCCCCccCCcccccceecCChHHHHHhhccCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEEc
Confidence 5799999996542 23689999999999999999887776665445678899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
||++|+.+++.+++++||+|+++.+.|+.++..+...++..|+++++++..|++++++++++ +|++|++|+|+||+|.+
T Consensus 87 sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~~i~~-~tklI~iesP~NPtG~v 165 (400)
T PRK06234 87 SGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVRNALKA-NTKVVYLETPANPTLKV 165 (400)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHHHHhcc-CCeEEEEECCCCCCCCc
Confidence 99999999999999999999999999999888777777888999999999999999999987 59999999999999999
Q ss_pred cCHHHHHHHHHhC--CCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH--hhhcC
Q 009172 313 VDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLG 388 (541)
Q Consensus 313 ~di~~Ia~la~~~--gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~--~~~~g 388 (541)
.|+++|.++|+++ |+++|+|++|+.++...++..|+|++++|+||+++|++++++|+++++++++++++.. ...+|
T Consensus 166 ~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g 245 (400)
T PRK06234 166 TDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTG 245 (400)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcC
Confidence 9999999999997 9999999999988877888889999999999999999998899999999988888753 34578
Q ss_pred CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHH
Q 009172 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA 468 (541)
Q Consensus 389 ~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~ 468 (541)
..++++.+++++++++++..|++++.+|+++++++|++||.|.+|+||+|++||+|+++++++.++|+|++|+++++.+.
T Consensus 246 ~~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~ 325 (400)
T PRK06234 246 SVIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEE 325 (400)
T ss_pred CCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999876677
Q ss_pred HHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 469 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 469 ~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
+.+|+++|+++++++|||+++||++||++++|..+++++++..|+++++||||||+||++|||+||++||+++
T Consensus 326 ~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 326 GKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALDLI 398 (400)
T ss_pred HHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999863
No 32
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=7.5e-66 Score=543.15 Aligned_cols=374 Identities=38% Similarity=0.661 Sum_probs=346.1
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|+++|+|...+ ..+++++||||+|+||.|++.+ +..+|.|+|+++|+..+||++||+++|.+.+++++
T Consensus 3 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~p~~~~Le~~lA~l~g~~~~~~~~ 72 (377)
T PRK07671 3 AKTKLIHGGIIGD--PSTGAVSVPIYQVSTYKQEAVG--------KHQGYEYSRTGNPTRAALEELIAVLEGGHAGFAFG 72 (377)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCCC--------CcCCCCcCCCCChHHHHHHHHHHHHhCCCceEEeC
Confidence 5789999996542 2368999999999999987742 23578999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
||++|+.+++ .++++||+|+++++.|++++..+...++..|+++++++..|++++++++++ +||+|++|+|+||+|.+
T Consensus 73 sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~-~tklV~le~P~NPtg~~ 150 (377)
T PRK07671 73 SGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRP-NTKAIYVETPTNPLLKI 150 (377)
T ss_pred CHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCCcc
Confidence 9999887765 578999999999999998887777777888999999998899999999987 59999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCc
Q 009172 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~~~ 391 (541)
.|+++|.++|+++|+++|+|++|+.++..++..+|+|++++|+||+++||+++++|+++. +++++++++..+...|..+
T Consensus 151 ~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~ 230 (377)
T PRK07671 151 TDIKKISTIAKEKGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGIL 230 (377)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999887778888999999999999999999989998776 4578888888888889999
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009172 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~ 471 (541)
+++.+|+++++++++..|++++++|++.+++||+++|.|.+|+||++++||+|+++++|+.|+|+|++|++ ++.+.+.+
T Consensus 231 ~~~~a~l~~~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~-~~~~~~~~ 309 (377)
T PRK07671 231 GPQDSWLLLRGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV-GSEETANK 309 (377)
T ss_pred CHHHHHHHHcCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe-CCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 56788999
Q ss_pred HHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
|+++|+++.+++|||+++||+++|+.++|+.++++.++.+|+++++||||||+||++|||+||++||+
T Consensus 310 f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 377 (377)
T PRK07671 310 VLERLQYFTLAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGIEDGEDLIEDLAQALA 377 (377)
T ss_pred HHHhCCcceEccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999985
No 33
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=9e-66 Score=544.63 Aligned_cols=381 Identities=35% Similarity=0.567 Sum_probs=352.5
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
+++|.++|.|...+ ..+++++||||+|+||.|++.+++.+.+.+...+|.|+||++|+.++||++||+++|.++++++
T Consensus 5 ~~~t~~~~~~~~~~--~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al~~ 82 (386)
T PRK06767 5 HMETALIHHGYTSE--EHKGSLTPPLFQTSTFTFETAQQGEASFAGVDPSYIYSRLGNPTVKLFEERMAVLEGGEEALAF 82 (386)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCccceecCCHHHHHHhhccCcCCccccCCCCcchHHHHHHHHHHhCCCcEEEE
Confidence 36799999996542 2368999999999999999998888777666678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+||++|+.+++.+++++||+|+++.+.|++++..+.......|+++.+++..|++++++++++ +|++|++|+|+||+|.
T Consensus 83 ~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~~~i~~-~tklV~lesp~NptG~ 161 (386)
T PRK06767 83 GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIENKIRP-NTKLIFVETPINPTMK 161 (386)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhhCc-CceEEEEeCCCCCCce
Confidence 999999999999999999999999999999988887767778999999988899999999987 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHH-HHhhhcCCC
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR-NLHHVLGGA 390 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~-~~~~~~g~~ 390 (541)
+.|+++|.++|+++|+++|+|++|+.++.+.++..|+|++++|+||+++|++++++|++++++++++++. ......|+.
T Consensus 162 v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~ 241 (386)
T PRK06767 162 LIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGI 241 (386)
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999888788888999999999999999999998999999988877654 455667888
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009172 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~ 470 (541)
++++.+|+++++++++..|++++.+++++++++|+++|+|..|.|| +|+++++|+++.|+||+|+++++.+.+.
T Consensus 242 ~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~~~gg~vsf~l~~~~~~~~ 315 (386)
T PRK06767 242 MAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMKRGGGVISFSIKGGKEETQ 315 (386)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCCCCCceEEEEEcCCHHHHH
Confidence 8999999999999999999999999999999999999999999998 6899999999999999999987667889
Q ss_pred HHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
+|+++|+++++++|||+++|++++|..++|..+++++++..|+++++||||||+||++|||+||++||++|
T Consensus 316 ~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 386 (386)
T PRK06767 316 AFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQALKKI 386 (386)
T ss_pred HHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875
No 34
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=1e-65 Score=551.34 Aligned_cols=374 Identities=33% Similarity=0.592 Sum_probs=343.4
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|+++|.|...+ .+++++||||+|+||.|++.. +...|.|+|++||++++|++++|+++|.+.+++++
T Consensus 87 ~~t~~~~~~~~~~---~~~~~~~Pi~~sst~~~~~~~--------~~~~~~Y~r~gnpt~~aLE~~lA~leg~e~ai~~~ 155 (464)
T PLN02509 87 VSTLLVNLDNKFD---PFDAMSTPLYQTATFKQPSAI--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFT 155 (464)
T ss_pred cchHheeCCCCCC---CCCCccCCccccceecCcccc--------ccCCCccCCCCCHHHHHHHHHHHHHhCCCEEEEeC
Confidence 7899999995432 257999999999999887631 23568999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
||++|+.+++ .++++||+||++++.|+++..++...+...|+++.+++..|++++++++++ +||+|++|+|+||+|.+
T Consensus 156 SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~~ai~~-~TklV~lesPsNPtG~i 233 (464)
T PLN02509 156 SGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVAAAIGP-QTKLVWLESPTNPRQQI 233 (464)
T ss_pred cHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHHHhCCc-CCeEEEEECCCCCCCCH
Confidence 9999986655 578999999999999999887777777788999999998899999999987 59999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCCCc
Q 009172 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~-~li~~l~~~~~~~g~~~ 391 (541)
.|+++|+++|+++|+++|+|++++.++.++++..|+|++++|++|+++||+++++|+++.++ .+.++++..+...|..+
T Consensus 234 ~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l 313 (464)
T PLN02509 234 SDIRKIAEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGL 313 (464)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999998888888899999999999999999999999998754 45566666666667889
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009172 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~ 471 (541)
+|+.+|+++++|+++..|++++++++++++++|++||.|++|+||+|++||+|+++++|+.|+|+|++|++ ++.+.+.+
T Consensus 314 ~p~~A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~-~~~~~~~~ 392 (464)
T PLN02509 314 APFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT-GSVALSKH 392 (464)
T ss_pred CHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe-CCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 56778899
Q ss_pred HHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
|+++|+++.+++|||+++||+++|+.++|..++++++++.||++++||||||+||++|||+||++||+.
T Consensus 393 f~~~l~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGlE~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 393 LVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFRT 461 (464)
T ss_pred HHHcCCcceEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999974
No 35
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=2e-65 Score=547.04 Aligned_cols=384 Identities=39% Similarity=0.626 Sum_probs=348.5
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|.++|+|...+ ..+++++||||+++||.|++.+++.+.++....+|.|+|+++|+.++||++||+++|.+.+++++
T Consensus 2 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~ysr~~~p~~~~le~~lA~l~g~~~~v~~~ 79 (418)
T TIGR01326 2 FETLQLHAGQEPD--PTTGSRAVPIYQTTSYVFDSTEHAAALFGLQEAGNIYSRLMNPTTDVLEQRIAALEGGVAALAVA 79 (418)
T ss_pred ccceeEECCCCCC--CCCCCccCCccCCCCeecCCHHHHHHhhccCcCCceeECCCChhHHHHHHHHHHHhCCCeEEEEc
Confidence 5688999986542 23589999999999999999988766554444568999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
|||+|+..++.+++++||+||++.+.|++++..+...++..|+++++++..|++++++++++ ++++|++|+|+||+|.+
T Consensus 80 sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~-~t~~V~le~p~NPtg~v 158 (418)
T TIGR01326 80 SGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFEKAIDE-NTKAVFAETIGNPAINV 158 (418)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCc-CCeEEEEECCCCCCCee
Confidence 99999999999999999999999999999888877778888999999998899999999987 59999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHH---------------
Q 009172 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV--------------- 377 (541)
Q Consensus 313 ~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li--------------- 377 (541)
.|+++|.++|+++|+++|+|++|+.++...++..|+|++++|+||+++|+|+++||+++.++++.
T Consensus 159 ~dl~~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~ 238 (418)
T TIGR01326 159 PDIEAIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPS 238 (418)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCc
Confidence 99999999999999999999999988777888889999999999999999999999888543211
Q ss_pred -----------------HHHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCC
Q 009172 378 -----------------TQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKS 440 (541)
Q Consensus 378 -----------------~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s 440 (541)
+.........|..++|..+|+++++++++..|++++.+|+..++++|.+||+|..|+||++++
T Consensus 239 q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~ 318 (418)
T TIGR01326 239 YHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLAS 318 (418)
T ss_pred cccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 111123445688889999999999999999999999999999999999999999999999999
Q ss_pred CchhhhHhhhc-CCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEE
Q 009172 441 HPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVR 519 (541)
Q Consensus 441 ~p~~~l~~~~~-~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IR 519 (541)
||+|+++++|+ .|+|+|++|+++++.+.+.+|+++|+++.+++|||+++||+++|..++|..+++++++..|+++++||
T Consensus 319 ~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR 398 (418)
T TIGR01326 319 HPHHALAKKYLPKGFGAVLSFEIKGGREAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIR 398 (418)
T ss_pred CccHHHHHHhccCCCcceEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEE
Confidence 99999999999 78999999999877677899999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHh
Q 009172 520 FSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 520 lSvG~Ed~edli~dL~~AL~ 539 (541)
||||+||++|||+||++||+
T Consensus 399 ~svGlE~~~dl~~dl~~Al~ 418 (418)
T TIGR01326 399 LSVGIENIDDIIADLEQALE 418 (418)
T ss_pred EEecCCCHHHHHHHHHHhhC
Confidence 99999999999999999985
No 36
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=1.9e-65 Score=539.02 Aligned_cols=377 Identities=38% Similarity=0.644 Sum_probs=342.4
Q ss_pred CCccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEE
Q 009172 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (541)
Q Consensus 151 ~~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~ 230 (541)
.+++|.++|.|...+ ..++++.||||++++|.|++.+++....+....+|.|+|++||++++||+++++++|++.+++
T Consensus 7 ~~~~t~~~~~~~~~~--~~~~~~~~pI~~ss~~~~~~~~~~~~~~~~~~~~~~Y~r~~~P~~~~lE~~la~leg~~~av~ 84 (384)
T PRK06434 7 NGFNTRAVQSGELRD--PRFGNVTTPIFETSTFVYPNSEKEAYMDSTRGMPYIYTRWGNPTVQAFEEKYAVLENAEHALS 84 (384)
T ss_pred CCcccceeECCCCCC--CCCCCccCCeeCCcceecCChHHhhhccccccCCcceeCCCChhHHHHHHHHHHHhCCCcEEE
Confidence 347899999986442 346899999999999999998766532222235699999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCC
Q 009172 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (541)
Q Consensus 231 ~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG 310 (541)
++|||+|+.+++.+++++||+||++...|++++.++...+..+|++++++|.++.+.++ ++++++++|++|+|+||++
T Consensus 85 ~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~ 162 (384)
T PRK06434 85 FSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTL 162 (384)
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCc
Confidence 99999999999999999999999999999999988877788899999999987666665 5554699999999999999
Q ss_pred cccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCC
Q 009172 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGG 389 (541)
Q Consensus 311 ~v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~ 389 (541)
.+.|+++|+++||+++ ++||+++++++.++|+..|+|++++|.||+++||++++||+++. ++++.++++..+..+|.
T Consensus 163 ~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~ 240 (384)
T PRK06434 163 KVPDIKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGS 240 (384)
T ss_pred eeecHHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCC
Confidence 9999999999999998 56799999999999999999999999999999999999999877 45677778777667899
Q ss_pred CccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHH
Q 009172 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 469 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~ 469 (541)
.++++.+|+++++|++++.|++++++|++.++++|+.||.|++|+||+|+ ++++|+.|+|+|++|++++ .+.+
T Consensus 241 ~~~~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~g~g~~~sf~l~~-~~~~ 313 (384)
T PRK06434 241 NPDPIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLRGFGGMLSFELRS-MEDV 313 (384)
T ss_pred CCCHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcCCCCceEEEEECC-HHHH
Confidence 99999999999999999999999999999999999999999999999984 8899999999999999985 6788
Q ss_pred HHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
.+|+++|+++.+++|||+++|++++|+.++|..+++++++..|+++++||||||+||++|||+||+|||++
T Consensus 314 ~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGlEd~~dLi~dl~~Al~~ 384 (384)
T PRK06434 314 HKFIRNLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGIEDIDDLIKDIENALSK 384 (384)
T ss_pred HHHHHhCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999974
No 37
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-65 Score=537.69 Aligned_cols=374 Identities=41% Similarity=0.686 Sum_probs=346.7
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
+++|.++|.|.+ ..++++.||||+|+||.|++. .+|.|+|..+|+.++||++||+++|++.++++
T Consensus 2 ~~~t~~~~~~~~----~~~~~~~~pi~~~~~~~~~~~-----------~~~~y~r~~~p~~~~L~~~lA~l~g~~~~v~~ 66 (376)
T PRK06460 2 KDATRTVREDID----EATGAITTPIYQTTAYHYPEG-----------EKYRYSREANPTVLELTKKIVELENAEMGVAF 66 (376)
T ss_pred CcceeeeecCCC----CCCCCccCCccCCcceeeCCC-----------CCcceeCCCCccHHHHHHHHHHHhCCCcEEEe
Confidence 378999999852 236899999999999998763 26899999999999999999999999989999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+||++|+..++.+++++||+|+++.+.|++++..+...++..|+++..++.++.+.+++.+++ ++|+|++|+|+||+|.
T Consensus 67 ~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l~~~~~~-~tklV~l~sp~NPtG~ 145 (376)
T PRK06460 67 SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNIIEKAKSK-RYDVVFVENITNPLLR 145 (376)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCCc
Confidence 999999999999999999999999999998888887778888999999987776667666665 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~ 391 (541)
+.|+++|.++|+++|+++|+|++|+.++...++..++|++++|+||+++|+++.++|+++++++++++++..+..+|..+
T Consensus 146 v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~ 225 (376)
T PRK06460 146 VVDITELSKVCKENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSL 225 (376)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999998776677777899999999999999998899999999999999988888888889
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009172 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~ 471 (541)
++..+|+++++++++..|++++.+|+++++++|++||.|.+|+||+|++||+|+++++|+.|+|+|++|+++++.+.+.+
T Consensus 226 ~~~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~ 305 (376)
T PRK06460 226 DPHAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALK 305 (376)
T ss_pred CHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778999
Q ss_pred HHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
|+++|+++.+++||||++|++.+|++++|+.++++.+++.|+++++||||||+||++|||+||++||+++
T Consensus 306 ~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 306 VMKSLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGIEDVNDLIEDLDRALSTL 375 (376)
T ss_pred HHHhCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999864
No 38
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=6.6e-65 Score=535.23 Aligned_cols=368 Identities=49% Similarity=0.810 Sum_probs=348.9
Q ss_pred CcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCC
Q 009172 171 DAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG 250 (541)
Q Consensus 171 ~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD 250 (541)
++++||||+|+||.|++.+++.+.+.++.++|.|+|+++|+.++||++||+++|++++++++||++|+..++.+++++||
T Consensus 1 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd 80 (369)
T cd00614 1 GAVAPPIYQTSTFVFPSPAEAADLFALREGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGD 80 (369)
T ss_pred CCcCCCccCCCceecCCHHHHHHhhcCCcCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCC
Confidence 46899999999999999998887776666789999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEE
Q 009172 251 HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 251 ~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillv 330 (541)
+|+++.+.|+++...+...++..|+++.+++..|++++++++++ ++++|++|+|+||+|.+.|+++|.++|+++|+++|
T Consensus 81 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~li 159 (369)
T cd00614 81 HVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLV 159 (369)
T ss_pred EEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEE
Confidence 99999999999988777777788999999999999999999987 59999999999999999999999999999999999
Q ss_pred EEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHHH
Q 009172 331 IDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLR 409 (541)
Q Consensus 331 vDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~-~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~r 409 (541)
+|++|+.++.++++.+|+|++++|+||+++|++++++|++++++ +++++++.....+|..+++..+++++++++++..|
T Consensus 160 vD~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~r 239 (369)
T cd00614 160 VDNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPLR 239 (369)
T ss_pred EECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHHH
Confidence 99999998888888999999999999999999999999999987 88899988877789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcc
Q 009172 410 VQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 489 (541)
Q Consensus 410 ~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~ 489 (541)
++++.+|+++++++|+++|.|.+|+||+++++|+|+++++++.|.|+|++|+++++.+.+.+|+++|+++.+++|||+++
T Consensus 240 ~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~ 319 (369)
T cd00614 240 MERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVE 319 (369)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999866788999999999999999999999
Q ss_pred cceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
|++++|..++|..++++.++..|+++++||||||+||++|||+||++||+
T Consensus 320 sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGlE~~~dl~~dl~~al~ 369 (369)
T cd00614 320 SLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGIEDVEDLIADLEQALK 369 (369)
T ss_pred eeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999984
No 39
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=8.7e-65 Score=535.40 Aligned_cols=374 Identities=34% Similarity=0.598 Sum_probs=344.8
Q ss_pred cccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeCC
Q 009172 154 GSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMAS 233 (541)
Q Consensus 154 ~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sS 233 (541)
+|.++|.|... . .+++++||||+|+||.|++.+ ...+|.|+|+++|+.++||+++++++|++++++++|
T Consensus 2 ~t~~~~~~~~~--~-~~~~~~~pi~~~~~~~~~~~~--------~~~~~~Y~r~~~p~~~~le~~la~l~g~~~~l~~~s 70 (378)
T TIGR01329 2 STLLVNTDNKN--D-PYDASSMPIYQTATFKQPLAI--------ENGPYDYTRSGNPTRTALESLLAKLDKADRAFAFSS 70 (378)
T ss_pred CceeEeCCCCC--C-CCCCcCCCeecCcceecCCcc--------ccCCCccCCCCChHHHHHHHHHHHHhCCCcEEEECC
Confidence 68889998542 2 268999999999999987632 124799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCccc
Q 009172 234 GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV 313 (541)
Q Consensus 234 G~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~ 313 (541)
|++|+.+++. ++++||+|+++++.|+++..++...++..|+++++++..|++++++++++ +||+|++|+|+||+|.+.
T Consensus 71 G~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i~~-~tklv~le~psnptg~v~ 148 (378)
T TIGR01329 71 GMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAALGP-KTKLVLLESPTNPLQKIV 148 (378)
T ss_pred HHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCc-CceEEEEECCCCCCCeee
Confidence 9999988775 78999999999999999888777777888999999999999999999987 599999999999999999
Q ss_pred CHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCCcc
Q 009172 314 DVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALN 392 (541)
Q Consensus 314 di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~-~~li~~l~~~~~~~g~~~s 392 (541)
|+++|+++||++|+++|+|++++.++.+.++.+|+|++++|+||+++||+++++|+++.+ +++.++++..+...|..++
T Consensus 149 dl~~I~~la~~~g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~ 228 (378)
T TIGR01329 149 DIRKISEMAHAQNALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLA 228 (378)
T ss_pred cHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCC
Confidence 999999999999999999999988888888899999999999999999998889999875 4566788877776788899
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHH
Q 009172 393 PNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 472 (541)
Q Consensus 393 ~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~ 472 (541)
++.+|+++++++++..|++++.+|+..+++||++||.+.+|+||+|+++|+|+++++++.|+|+||+|++ ++.+.+.+|
T Consensus 229 ~~~a~l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~~~~~~~~ 307 (378)
T TIGR01329 229 PFDCWLLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GSVALSKRL 307 (378)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE-CCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 566668999
Q ss_pred HHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 473 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 473 l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
++.|+++++++|+|+++||+++|+.++|+.+++++++..|+++++||||||+||++|||+||++||+++
T Consensus 308 ~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 308 VEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFVTA 376 (378)
T ss_pred HHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999863
No 40
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.1e-64 Score=536.48 Aligned_cols=375 Identities=39% Similarity=0.638 Sum_probs=344.5
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|+.+|.|...+ ..+++++||||+|+||.|++.++ ...+|.|+|+++|+..+||++||+++|.+.+++++
T Consensus 13 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~-------~~~~~~Y~r~~~p~~~~Le~~lA~~~g~~~~i~~~ 83 (388)
T PRK07811 13 FATRAIHAGYEPD--PATGAVNPPIYASSTFAQDGVGG-------LRGGYEYARTGNPTRTALEEQLAALEGGAYGRAFS 83 (388)
T ss_pred cccceeeCCCCCC--CCCCCccCCccCCcceecCCccc-------ccCCCcccCCCCccHHHHHHHHHHHhCCCceEEeC
Confidence 6799999986542 34689999999999999887532 12468999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
||++|+.+++.+++++||+||++.+.|++++..+...++.+|+++.+++..|++++++++++ +||+|++|+|+||+|.+
T Consensus 84 sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~ 162 (388)
T PRK07811 84 SGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAITP-RTKLIWVETPTNPLLSI 162 (388)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhcCc-CCeEEEEECCCCCccee
Confidence 99999999999999999999999999999888777777788999999999999999999987 59999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009172 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~-~~li~~l~~~~~~~g~~~ 391 (541)
.|+++|.++|+++|+++|+|++|+.+....++..|+|++++|++|+++|++++++|+++.+ +++.++++..+...|...
T Consensus 163 ~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~ 242 (388)
T PRK07811 163 TDIAALAELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVP 242 (388)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998877788888999999999999999999889988875 667777777766778888
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009172 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~ 471 (541)
++..+|+++++++++..|++++.+|++.++++|++||.|.+|+||++++||+|+++++|+.|+|+||+|+++++.+.+.+
T Consensus 243 s~~~a~l~~~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~ 322 (388)
T PRK07811 243 GPFDAYLTLRGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARD 322 (388)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778899
Q ss_pred HHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
|+++|+++.+++|||+++|++++|..++|..++.+ ..|+++++||||||+||++|||+||++||++
T Consensus 323 f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 388 (388)
T PRK07811 323 FCARTKVFTLAESLGGVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLADLEQALGQ 388 (388)
T ss_pred HHHhCCcceeeccCCCCcceEeCCcccCcccCCHh---hcCCCCCEEEEEeCCCCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999998854 4599999999999999999999999999974
No 41
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=3.3e-64 Score=533.39 Aligned_cols=380 Identities=26% Similarity=0.433 Sum_probs=346.8
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
+++|+++|.|...+ ..+++++||||+|+||.|++.+++...+.++..+|.|+||+||++++||+++|+++|.+.++++
T Consensus 9 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~~ 86 (394)
T PRK07050 9 ALQTRIVQPDDQIP--PGFRSFVTPVARASTVVFPDLATMRALDWRQDVQWRYGLHATPTSLALAQRLAEIEGGRHALLQ 86 (394)
T ss_pred CccchheECCCCCC--CCCCCccCCeeCCcceecCCHHHHHhhcccccCCcccCCCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 57899999996542 2368999999999999999998887666545568999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+||++|+.+++.+++++||+||++++.|+++..++...+...|+++++++..+.+++++++++ +||+|++|+|+||+|.
T Consensus 87 ~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~~~i~~-~tklV~le~p~Np~~~ 165 (394)
T PRK07050 87 PSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIADLIQP-NTRLIWLEAPGSVTME 165 (394)
T ss_pred ccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHHHhcCC-CCeEEEEECCCCCCcc
Confidence 999999999999999999999999999999887776667888999999988788899999987 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~~ 390 (541)
+.|+++|+++|+++|+++|+|++|+.+..++++..|+|++++|+||+++||+++++|+++. +++++++++..+...|..
T Consensus 166 ~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~ 245 (394)
T PRK07050 166 VPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIG 245 (394)
T ss_pred HhhHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999998899999999999999999999999998997776 678888898888888999
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC--CHHH
Q 009172 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DLTA 468 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g--~~~~ 468 (541)
++++++|+++++++++..|++++.+|+.++++||++||.|.+|+||+++++|+|.++++++.++|++++|++++ +.+.
T Consensus 246 ~~~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~ 325 (394)
T PRK07050 246 VSADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQ 325 (394)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986 3578
Q ss_pred HHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 469 TIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 469 ~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
..+|+++|+++++++|||+++||++ |..++|.... ..++.+++||||||+||++|||+||++||++
T Consensus 326 ~~~~~~~l~~~~~~~s~G~~~sl~~-~~~~~~~~~~-----~~~~~~~~iR~svGlE~~~dl~~dl~~al~~ 391 (394)
T PRK07050 326 VDAFVEALELFAIGWSWGGACSLAM-PYDVASMRTA-----KWPHRGTLVRLYIGLEDEADLIADLEQALEA 391 (394)
T ss_pred HHHHHHcCCCCeeccccCCccceEe-eCcccccchh-----hcCCCCCEEEEEeCcCCHHHHHHHHHHHHHH
Confidence 8999999999999999999999998 8776665542 2336679999999999999999999999985
No 42
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=3e-63 Score=525.81 Aligned_cols=376 Identities=37% Similarity=0.610 Sum_probs=348.3
Q ss_pred ccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeC
Q 009172 153 DGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMA 232 (541)
Q Consensus 153 ~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~s 232 (541)
++|+++|.|...+ ..+|++.+|||++++|.|++.++ ..+|.|+|..+|+.++||++||+++|++.+++++
T Consensus 7 ~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~ 76 (390)
T PRK08064 7 IDTLLLHNQYKHD--KQTGAVNVPIYHASTFHQFDFDT--------FGKYDYSRSGNPTREALEDIIAELEGGTKGFAFA 76 (390)
T ss_pred cccceeeCCCCCC--CCCCCccCCcccCcceecCcccc--------cCCCcccCCCChhHHHHHHHHHHHhCCCCeEEEC
Confidence 6799999986542 24689999999999999887543 2468899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
|||.|+.+++. ++++||+||++++.|++++..+...++..|+++++++..|++++++++++ +|++|++|+|+||+|.+
T Consensus 77 sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~-~tklV~l~~p~NptG~~ 154 (390)
T PRK08064 77 SGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEVAQNIKP-NTKLFYVETPSNPLLKV 154 (390)
T ss_pred CHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCC-CceEEEEECCCCCCcEe
Confidence 99999988886 78999999999999999888877777888999999998899999999987 59999999999999999
Q ss_pred cCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCCc
Q 009172 313 VDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGAL 391 (541)
Q Consensus 313 ~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~-~~li~~l~~~~~~~g~~~ 391 (541)
.|+++|.++|+++|+++|+|++|+.+....+.++|+|++++|+||+++|++++++|+++.+ ++++++++..+..+|...
T Consensus 155 ~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~ 234 (390)
T PRK08064 155 TDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVL 234 (390)
T ss_pred ccHHHHHHHHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998877778888999999999999999999899988775 578899998888889999
Q ss_pred cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHH
Q 009172 392 NPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIK 471 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~ 471 (541)
++..+|+++++++++..|++++++|+.++++||+++|.|.+|+||+|+++|+|+++++++.|+|+|++|++++ .+.+.+
T Consensus 235 ~~~~a~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~-~~~~~~ 313 (390)
T PRK08064 235 GVQDCWLVLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS-EEAVRQ 313 (390)
T ss_pred CHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999974 678899
Q ss_pred HHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 472 FIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 472 ~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
|+++++++.+++|+|+.+|++++|+.++|..++.+.+...|+++++||||||+||++|+|+||++||+++
T Consensus 314 f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 314 FVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred HHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999863
No 43
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=6.5e-63 Score=526.51 Aligned_cols=382 Identities=30% Similarity=0.518 Sum_probs=345.4
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhccc----CCCCCCCCCchhHHHHHHHHHHHhCCCc
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRR----ASFEYGRYGNPTTVVVEEKMSALEGAES 227 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~----~~~~Y~R~~~p~~~~Le~~LA~l~g~~~ 227 (541)
...+.++|+|...++ +++++||||+|+||.|++.+++.+.+.++. .+|.|+|++||++++||++||+++|++.
T Consensus 17 ~~~~~~~~~~~~~~~---~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~lA~l~g~~~ 93 (418)
T PLN02242 17 DPAAALASARHEFGE---HGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQMAALEGTEA 93 (418)
T ss_pred ChHHHHhcCCCCCCC---CCCccCCcccCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHHHHHHhCCCe
Confidence 466889999976532 467899999999999999988877665442 3589999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcc-cCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCC
Q 009172 228 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP-KMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (541)
Q Consensus 228 ~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~-~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~ 306 (541)
+++++||++|+.+++.+++++||+|+++.+.|+++...+...+. ..|+++++++..|+++++++++++++|+|++++|+
T Consensus 94 ~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~ 173 (418)
T PLN02242 94 AYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESIS 173 (418)
T ss_pred EEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCC
Confidence 99999999999999999999999999999999988776654443 47999999998899999999986349999999999
Q ss_pred CCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-
Q 009172 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH- 385 (541)
Q Consensus 307 NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~- 385 (541)
||||.+.|+++|.++|+++|++||+|++|. ++.+++..+|+|++++|+||+++|++++++|++++++++++.++..+.
T Consensus 174 NPtG~v~dl~~I~~la~~~gi~livDea~~-~~~~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~ 252 (418)
T PLN02242 174 NPTLTVADIPELARIAHEKGVTVVVDNTFA-PMVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHG 252 (418)
T ss_pred CCCCcccCHHHHHHHHHHhCCEEEEECCCC-ccCCCHHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhh
Confidence 999999999999999999999999999996 455677788999999999999999999999999999999888876533
Q ss_pred ---hcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhc---CCcccEEE
Q 009172 386 ---VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQM---TGFGGVVS 459 (541)
Q Consensus 386 ---~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~---~g~g~~vs 459 (541)
..|..+++..+++++++++++..|++++.+|+.+++++|++++ + +|+||+|++||+|+++++++ .|+|+||+
T Consensus 253 ~~~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~-~-~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~s 330 (418)
T PLN02242 253 ALMLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG-L-KVIYPGLEDHPQHALLKSMANKGYGFGGLLC 330 (418)
T ss_pred hhhccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC-C-EEECCCCCCCccHHHHHHhcccCCCceeEEE
Confidence 4677889999999999999999999999999999999999996 3 89999999999999999999 58999999
Q ss_pred EEEcCCHHHHHHHHHHcCCC----ceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHH
Q 009172 460 FEVDGDLTATIKFIDALKIP----YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED-FEDLKADV 534 (541)
Q Consensus 460 f~l~g~~~~~~~~l~~L~~~----~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed-~edli~dL 534 (541)
|+++ +.+.+.+|+++++++ .+++|||+++|++++|+.++|..+++++++..|+++++||||+|+|+ ++|||+||
T Consensus 331 f~l~-~~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~~dli~dl 409 (418)
T PLN02242 331 LDMD-TEERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYTGTLEQRWSQF 409 (418)
T ss_pred EEEC-CHHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCCCCHHHHHHHH
Confidence 9996 467899999999977 88999999999999999999999999999999999999999999995 99999999
Q ss_pred HHHHhh
Q 009172 535 LQALHA 540 (541)
Q Consensus 535 ~~AL~~ 540 (541)
++||++
T Consensus 410 ~~al~~ 415 (418)
T PLN02242 410 EKALSA 415 (418)
T ss_pred HHHHHH
Confidence 999986
No 44
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=1.2e-61 Score=508.44 Aligned_cols=357 Identities=35% Similarity=0.566 Sum_probs=324.0
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
.++|.++|.|...+ ..+++++||||+|+||.|++. ++..+|.|+|++||+.++||++||+++|++.++++
T Consensus 6 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~st~~~~~~--------~~~~~~~Y~R~~~p~~~~le~~lA~leg~~~~v~~ 75 (364)
T PRK07269 6 HINTILAQAGIKSD--EATGALVTPLHFSTTYQHPEF--------GQSTGFDYTRTKNPTRAKLEETLAAIESADYALAT 75 (364)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccCCcceecCCC--------CCcCCcceeCCCCccHHHHHHHHHHHhCCCeEEEe
Confidence 36799999996542 236899999999999998873 12357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+||++|+.+++ .++++||+||++.+.|+++..++....+..++++.+. .|++++++++++ +||+|++|+|+||+|.
T Consensus 76 ~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~--~d~~~l~~~i~~-~TklV~lesP~NPtg~ 151 (364)
T PRK07269 76 SSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYA--NTEEELIAAIEE-DTDIVYIETPTNPLMV 151 (364)
T ss_pred CCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEec--CCHHHHHHhcCc-CceEEEEECCCCCCCe
Confidence 99999999988 4679999999999999999877765555556665543 479999999987 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~~ 390 (541)
+.|+++|+++|+++|+++|+|++|+.++.++++..|+|++++|+||+++||+|+++|++++ ++++.++++..+...|..
T Consensus 152 ~~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~ 231 (364)
T PRK07269 152 EFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAV 231 (364)
T ss_pred eeCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999888889999999999999999999999999999887 467888888777777889
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009172 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~ 470 (541)
++++.+|+++++|+++..|++++++|++++++||++||.|.+|+||+ .|++++|++. +.+.+.
T Consensus 232 ~s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg----------------~gg~~sf~~~-~~~~~~ 294 (364)
T PRK07269 232 LSPFDSYLLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG----------------KGGMISFKVA-DETRIP 294 (364)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC----------------cCcEEEEEEC-CHHHHH
Confidence 99999999999999999999999999999999999999999999997 4889999997 467788
Q ss_pred HHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
+|+++++++.+++|||+.+|++++|+.++|..++.++|...|+++++||||||+||++|||+||+|||+
T Consensus 295 ~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE~~~dli~dl~~al~ 363 (364)
T PRK07269 295 HILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIEDARDLIADLKQALE 363 (364)
T ss_pred HHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999996
No 45
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-60 Score=502.63 Aligned_cols=373 Identities=35% Similarity=0.552 Sum_probs=341.3
Q ss_pred cccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeCCHH
Q 009172 156 LAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGM 235 (541)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~ 235 (541)
.++|++... ..+++++||||+++||.|++.+++.+.+.++...|.|+|+++|++++||+++|+++|++.+++++|||
T Consensus 12 ~~~~~~~~~---~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~ 88 (389)
T PRK05968 12 ALITAHDEG---NAFDAVVPPIFQTSLFTFDSYDEMEDVYAGEKVRPIYSRGDNPTVRAFEEMLAKLEGAEDARGFASGM 88 (389)
T ss_pred heeecCCCc---cCCCCccCCccCCcceecCCHHHHHHhhcCCCCCccccCCCChhHHHHHHHHHHHhCCCcEEEECCHH
Confidence 467887553 34789999999999999999998888776666679999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCH
Q 009172 236 SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV 315 (541)
Q Consensus 236 ~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di 315 (541)
+|+.+++.+++++||+|+++.+.|++++..+...++..|+++++++..|++++++++ + +||+|++|+|+|+++.+.|+
T Consensus 89 ~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~dl 166 (389)
T PRK05968 89 AAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKAL-P-GAKLLYLESPTSWVFELQDV 166 (389)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhc-c-cCCEEEEECCCCCCCcHHHH
Confidence 999999999999999999999999999888877788889999999999999999998 4 48999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-hcCCCccHH
Q 009172 316 KLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGALNPN 394 (541)
Q Consensus 316 ~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~-~~g~~~s~~ 394 (541)
++|.++|+++|+++|+|++|+.+..+++...|+|++++|+||+++||+++++|+++++++++++++.... ..|..++++
T Consensus 167 ~~i~~la~~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~ 246 (389)
T PRK05968 167 AALAALAKRHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPF 246 (389)
T ss_pred HHHHHHHHHcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChH
Confidence 9999999999999999999998877788889999999999999999998889999999998888876443 467789999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHH
Q 009172 395 AAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 474 (541)
Q Consensus 395 ~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~ 474 (541)
.+++++++|+++..|++++.+++++++++|+++|.|..|+||++++||. +++.|+|+|++|+++++ ....+|++
T Consensus 247 ~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~-----~~~~g~g~~~sf~~~~~-~~~~~f~~ 320 (389)
T PRK05968 247 EAWLLLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPP-----AGLSGTSGLFSFIFREG-IDVRAFAD 320 (389)
T ss_pred HHHHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChH-----HhCCCCceEEEEEECCH-HHHHHHHH
Confidence 9999999999999999999999999999999999999999999999983 45678999999999853 56789999
Q ss_pred HcCCCceeecCCCcccceecCccccccc-CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 475 ALKIPYIAPSFGGCESIVDQPAIMSYWD-LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 475 ~L~~~~iavS~G~~~sl~~~pa~~~~~~-~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+|+.+++++|+|+.+|+++ |+.++|.. .+.+.++..|+++++||||||+||++|||+||++||++
T Consensus 321 ~L~~~~~~~s~G~~~slv~-p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 321 ALKLFRLGVSWGGHESLVV-PAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred hCCccEEecCCCCCCceee-eCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 9999999999999999999 99999887 55788889999999999999999999999999999985
No 46
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=3.5e-60 Score=498.51 Aligned_cols=363 Identities=35% Similarity=0.567 Sum_probs=322.7
Q ss_pred CccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEe
Q 009172 152 SDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIM 231 (541)
Q Consensus 152 ~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~ 231 (541)
++.|+++|.|...+ ..+++++||||+|+||.|++. .+..+|.|+||++|+..+||++||+++ .++++++
T Consensus 3 ~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~--------~~~~~~~y~ry~~p~~~~Le~~lA~l~-~~~~v~~ 71 (366)
T PRK07582 3 GDGTRSVHAGGPEA--VPGEPVLPGPVFAAPYHLSPG--------EPTGPDTYGRASNPTWRALEAALGELE-GAEALVF 71 (366)
T ss_pred CcccceeeCCCCCC--CCCCCccCCccccceEEccCc--------cccCCceeECCCCccHHHHHHHHHHHc-CCCEEEE
Confidence 47899999985432 236899999999999999852 123468899999999999999999999 6789999
Q ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCc
Q 009172 232 ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLR 311 (541)
Q Consensus 232 sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~ 311 (541)
+||++|+.+++.+++++||+||++.+.|+++..++...++.+|+++++++..+... .+.+ ++++|++|+|+||+|.
T Consensus 72 ~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~---~~~~-~t~lV~le~p~NPtg~ 147 (366)
T PRK07582 72 PSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE---AALA-GADLVLAETPSNPGLD 147 (366)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH---Hhcc-CceEEEEECCCCCCCC
Confidence 99999999999999999999999999999988777666777899999998765432 2334 5999999999999999
Q ss_pred ccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCC
Q 009172 312 CVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGA 390 (541)
Q Consensus 312 v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~~ 390 (541)
+.|+++|.++|+++|+++|+|++|+.+..+.++++|+|++++|+||+++|++++++|++++ +++++++++.++...|..
T Consensus 148 v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~ 227 (366)
T PRK07582 148 VCDLAALAAAAHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAI 227 (366)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998777778888999999999999999999999999887 478888888888888999
Q ss_pred ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHH
Q 009172 391 LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATI 470 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~ 470 (541)
++++.+|+++++++++..|++++++|++.++++|+++|.|.+|+||+|++||+|+++++||.|+|+|++|+++ +.+.+.
T Consensus 228 ~~~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~~~~~~ 306 (366)
T PRK07582 228 PGPFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-DAAAAE 306 (366)
T ss_pred CCHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-CHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 577889
Q ss_pred HHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
+|+++++++.+++|||+++|++.++... ..++++++||||||+||++|+|+||++||+++
T Consensus 307 ~~~~~l~~~~~~~s~G~~~sl~~~~~~~-----------~~~~~~~liR~svGlE~~~dli~dl~~al~~~ 366 (366)
T PRK07582 307 RFVAASRLVVAATSFGGVHTSADRRARW-----------GDAVPEGFVRLSCGIEDTDDLVADLERALDAL 366 (366)
T ss_pred HHHHhCCcceecccCCCccchhhhHHHc-----------CCCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999986443221 12367899999999999999999999999875
No 47
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=1.1e-58 Score=487.41 Aligned_cols=361 Identities=34% Similarity=0.591 Sum_probs=330.2
Q ss_pred CCccccccccCCcCCCCCCCCcccCCccccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEE
Q 009172 151 SSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVI 230 (541)
Q Consensus 151 ~~~~t~~~~~g~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~ 230 (541)
.+++|..+|.|...+ ..+++++||||+|+||.|++.+ +..+|.|+||+||+.++||++||+++|++.+++
T Consensus 3 ~~~~t~~~~~~~~~~--~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~pt~~~le~~la~l~g~~~~~~ 72 (366)
T PRK08247 3 STIETKLAQIGNRSD--ERTGTVNPPVYFSTAYRHEGIG--------ESTGFDYSRTGNPTRGVLEQAIADLEGGDQGFA 72 (366)
T ss_pred CCcchhheeCCCCCC--CCCCCccCCcccCcccccCCCC--------CcCCccccCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 457899999996542 2368999999999999887632 235799999999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCC
Q 009172 231 MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL 310 (541)
Q Consensus 231 ~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG 310 (541)
++||++|+.+++ .++++||+||++++.|++++..+...++.+|+++.+++..|++++++++++ +|++|++|+|+||+|
T Consensus 73 ~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~-~tklv~le~P~NP~~ 150 (366)
T PRK08247 73 CSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIEQAITP-NTKAIFIETPTNPLM 150 (366)
T ss_pred EcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHHHHhccc-CceEEEEECCCCCCC
Confidence 999999998765 688999999999999999988887778889999999999999999999987 599999999999999
Q ss_pred cccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCC
Q 009172 311 RCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGG 389 (541)
Q Consensus 311 ~v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~-~~li~~l~~~~~~~g~ 389 (541)
.+.|+++|.++|+++|+++|+|++|+.++.+.+...|+|++++|+||+++|++++++|+++++ +++.++++..+...|.
T Consensus 151 ~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~ 230 (366)
T PRK08247 151 QETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGA 230 (366)
T ss_pred cHHHHHHHHHHHHHcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999988888888888999999999999999999999999986 6788888877777788
Q ss_pred CccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHH
Q 009172 390 ALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT 469 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~ 469 (541)
.++++.+|+++++++++..|++++.+|+..++++|+++|++..|.||+ .|+|++|++++ .+..
T Consensus 231 ~~s~~~a~l~~~~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~----------------~gg~~sf~~~~-~~~~ 293 (366)
T PRK08247 231 VLSPFDSWLLIRGMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPG----------------RGGMLSFRLQD-EEWV 293 (366)
T ss_pred CCChHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCC----------------cCcEEEEEECC-HHHH
Confidence 889999999999999999999999999999999999999999999986 47899999974 5677
Q ss_pred HHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
.+|+++++++.+++|||+.++++++|+.++|..++++.|...|+++++||||+|+|+.+|||+||++||++
T Consensus 294 ~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGlE~~~dl~~dl~~al~~ 364 (366)
T PRK08247 294 NPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGIENVEDLIADLKQAFKQ 364 (366)
T ss_pred HHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999985
No 48
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.97 E-value=1.9e-30 Score=266.90 Aligned_cols=318 Identities=19% Similarity=0.209 Sum_probs=239.4
Q ss_pred HHhcccCCCCCCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh--c----cCCCEEEEcCCCCcchHHH
Q 009172 194 FKEKRRASFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL--V----PAGGHIVTTTDCYRKTRIF 265 (541)
Q Consensus 194 ~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~al--l----~~GD~VIv~~~~y~~~~~~ 265 (541)
.++|+++.|.|||......++.|+.+|+++|++ +.++|++|+++++++|.+. . +.|.|||++..+|+++...
T Consensus 28 ~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~ 107 (386)
T COG1104 28 VFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNT 107 (386)
T ss_pred hcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHH
Confidence 457888899999999999999999999999984 4555556679999999873 2 2578999999999999988
Q ss_pred HHhhcccCCcEEEEeCCC-----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-C
Q 009172 266 IETVLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-L 339 (541)
Q Consensus 266 ~~~~l~~~Gi~v~~vd~~-----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~-~ 339 (541)
++.+ +..|.+|++++++ |+++|+++|+++ |.+|.+...||.+|.++|+++|.++|+++|+++++|.+++.+ +
T Consensus 108 ~~~L-e~~g~~Vtyl~V~~~G~v~~e~L~~al~~~-T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gki 185 (386)
T COG1104 108 CRYL-ERQGFEVTYLPVDSNGLVDLEQLEEALRPD-TILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKI 185 (386)
T ss_pred HHHH-HhcCCeEEEeCCCCCCeEcHHHHHHhcCCC-ceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCce
Confidence 8655 7789999998865 899999999985 999999999999999999999999999999999999998874 5
Q ss_pred cccccccCCcEEEECCccccCCCCCceEEEEEeChHH-HHH-HHHHh---hhcCCCccHHH--H--HHHHHhHHHHHHHH
Q 009172 340 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKL-VTQ-IRNLH---HVLGGALNPNA--A--YLIIRGMKTLHLRV 410 (541)
Q Consensus 340 ~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~l-i~~-l~~~~---~~~g~~~s~~~--a--~l~l~~l~tl~~r~ 410 (541)
+.+...+++|++..|.||++|+.| .|+++.++.. ++. +..-. ....++.+... + .++....+.++...
T Consensus 186 pi~~~~~~vD~ls~SaHK~~GpkG---iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~ 262 (386)
T COG1104 186 PIDLEELGVDLLSFSAHKFGGPKG---IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEEN 262 (386)
T ss_pred eccccccCcceEEeehhhccCCCc---eEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 677777789999999999999998 5666655432 121 11111 11112222211 1 12223445566666
Q ss_pred HHHHHHHHHHHHHHHhC-CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcc
Q 009172 411 QQQNSTALRMAEILEAH-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCE 489 (541)
Q Consensus 411 ~~~~~na~~la~~L~~~-p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~ 489 (541)
++..+.+.++.+.|.+. |.+. .-+- +. ...++++.|.+++ ...+.++..|+..+|++|.|+++
T Consensus 263 ~~~~~lr~~l~~~l~~~~p~~~---~~g~---~~--------~rlP~~~~~~f~g--v~gE~ll~~L~~~gI~vStGSAC 326 (386)
T COG1104 263 ARLRKLRDRLEDGLLEIIPDVY---LNGD---DE--------PRLPNILNFSFPG--VEGESLLLALDLAGIAVSTGSAC 326 (386)
T ss_pred HHHHHHHHHHHHHHHhcCCcEE---EcCC---cc--------cCCCCeEEEEeCC--CcHHHHHHhccccCeEEeccccc
Confidence 66777777888888765 5432 1111 11 2356789999986 45677888999999999999875
Q ss_pred cceecCcccccccCCHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 490 SIVDQPAIMSYWDLSQSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~----~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+- -..-+...+.++|++ .+.||||+|..++++.++.+.++|.+
T Consensus 327 sS--------~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~ 373 (386)
T COG1104 327 SS--------GSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKE 373 (386)
T ss_pred cC--------CCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHH
Confidence 53 222355778889986 47899999999888888887777654
No 49
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.1e-26 Score=246.28 Aligned_cols=306 Identities=20% Similarity=0.221 Sum_probs=225.7
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHH-HHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009172 200 ASFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 200 ~~~~Y~R~~~p~~~~Le~~LA~l~g~~--~~i~~sSG~-~Ai~~al~al---l~~GD~VIv~~~~y~~~~~~~~~~l~~~ 273 (541)
+.|..+.+.....++.|+++|+++|++ +.|+|+.|+ ++++++..++ +++||+||+++.+|++....|..+.++.
T Consensus 56 ~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~ 135 (405)
T COG0520 56 GAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRT 135 (405)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhc
Confidence 344555555667889999999999985 567777666 9999999988 6999999999999999998888888888
Q ss_pred CcEEEEeCCC-----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccC
Q 009172 274 GITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLG 347 (541)
Q Consensus 274 Gi~v~~vd~~-----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~g 347 (541)
|+++++++.+ ++++++..+++ +||+|.+.+.+|.||.+.|+++|+++||++|++++||.+++.+. +.+..++|
T Consensus 136 Ga~v~~i~~~~~g~~~~~~~~~~i~~-~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~ 214 (405)
T COG0520 136 GAKVRVIPLDDDGLLDLDALEKLITP-KTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELG 214 (405)
T ss_pred CcEEEEEecCCCCCcCHHHHHHhcCC-CceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcC
Confidence 9999988743 58899998887 59999999999999999999999999999999999999988764 46777889
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh----------------------hcCCCccHHHHHHHHHhHHH
Q 009172 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH----------------------VLGGALNPNAAYLIIRGMKT 405 (541)
Q Consensus 348 aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~----------------------~~g~~~s~~~a~l~l~~l~t 405 (541)
+|++++|.|||+.|+. ..|++++++++.+.+..... .-.++++....+.+..+++.
T Consensus 215 ~Df~afsgHKwl~gP~--GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~ 292 (405)
T COG0520 215 CDFLAFSGHKWLLGPT--GIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDY 292 (405)
T ss_pred CCEEEEcccccccCCC--ceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHH
Confidence 9999999999666663 27999999999888732211 01122222223322233333
Q ss_pred HH-----HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCC
Q 009172 406 LH-----LRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIP 479 (541)
Q Consensus 406 l~-----~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-~~~~~~~l~~L~~~ 479 (541)
+. ...++..+..+++.+.|++.|.++.. .|.. ...+++++|.+++. ..+...++ ...
T Consensus 293 ~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~-g~~~-------------~~r~~~vsF~v~~~~~~dv~~~L---~~~ 355 (405)
T COG0520 293 LLEIGMEAIEAHERELTEYLLEGLSELPGVEIY-GPPD-------------ADRGGIVSFNVKGIHPHDVATLL---DEK 355 (405)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCCc-------------ccCceEEEEEeCCCCHHHHHHHH---HhC
Confidence 22 22334446677788888888887543 3321 01467999999873 34444444 444
Q ss_pred ceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 480 YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 480 ~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+|++..|..+.. |. .+..++. +.+|+|+++.++++.|+.|.++|++
T Consensus 356 gI~vr~g~~ca~---p~-----------~~~~~~~-~~iR~S~~~YNt~edid~l~~aL~~ 401 (405)
T COG0520 356 GIAVRAGHHCAQ---PL-----------HRLLGVD-ATIRASLHLYNTEEDVDRLLEALKK 401 (405)
T ss_pred CeEEEecccccc---HH-----------HHhcCCC-CceEEEEeecCCHHHHHHHHHHHHH
Confidence 678888754321 11 1223433 4599999999999999999999975
No 50
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=3.8e-26 Score=243.06 Aligned_cols=295 Identities=15% Similarity=0.173 Sum_probs=206.9
Q ss_pred CchhHHHHHHHHHHHhCC-C-cEEE-eCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 208 GNPTTVVVEEKMSALEGA-E-STVI-MASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~-~-~~i~-~sSG~~Ai~~al~al----l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.....+++++.||+++|+ + +.|+ ++|+++++.+++.++ +++||+||+++++|++.+..+....+..|++++.+
T Consensus 61 ~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v 140 (401)
T PRK10874 61 LTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKL 140 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEE
Confidence 345677899999999998 3 4454 555569999999887 47999999999999987666666667789998887
Q ss_pred CC-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEEEEC
Q 009172 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHS 354 (541)
Q Consensus 281 d~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDivv~S 354 (541)
+. .|++++++++++ +|++|++++|+||||.++|+++|.++|+++|+++++|++++.+ ...+....++|+++.|
T Consensus 141 ~~~~~~~~d~~~l~~~i~~-~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s 219 (401)
T PRK10874 141 PLGADRLPDVDLLPELITP-RTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFS 219 (401)
T ss_pred ecCCCCcCCHHHHHHhcCc-CcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEe
Confidence 63 378999999987 5999999999999999999999999999999999999998643 3344445689999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhh---------------------hcCCCccHHHHHHHHHhHHHHHH-----
Q 009172 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTLHL----- 408 (541)
Q Consensus 355 ~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~---------------------~~g~~~s~~~a~l~l~~l~tl~~----- 408 (541)
+||++|++| .|+++.++++++.+..+.. ...++.+......+..+++.+..
T Consensus 220 ~~K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~ 296 (401)
T PRK10874 220 GHKLYGPTG---IGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQ 296 (401)
T ss_pred cccccCCCc---cEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHH
Confidence 999888776 5899999888776543210 00122332233333334443321
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCc
Q 009172 409 RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 409 r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
..++..+.++++.+.|+++|++..+..+ .+++++|.+++- ....+.+.|...++.++.|..
T Consensus 297 ~~~~~~~l~~~l~~~l~~~~g~~~~~~~-----------------~~~i~~~~~~~~--~~~~~~~~L~~~gI~v~~g~~ 357 (401)
T PRK10874 297 AESWSRSLATLAEDALAKLPGFRSFRCQ-----------------DSSLLAFDFAGV--HHSDLVTLLAEYGIALRAGQH 357 (401)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEeCCC-----------------CCcEEEEEECCc--CHHHHHHHHHHCCcEEecccc
Confidence 2234445667777788777765422111 245888888642 123455555556777777643
Q ss_pred ccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 489 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
++. .....+|. .+.||+|++..++++.++.+.++|++
T Consensus 358 ~~~--------------~~~~~~g~-~~~iRiS~~~~nt~edid~ll~al~~ 394 (401)
T PRK10874 358 CAQ--------------PLLAALGV-TGTLRASFAPYNTQSDVDALVNAVDR 394 (401)
T ss_pred chH--------------HHHHHhCC-CCEEEEEecccCCHHHHHHHHHHHHH
Confidence 220 11223443 47999999988877777777777653
No 51
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=7.5e-26 Score=241.30 Aligned_cols=297 Identities=15% Similarity=0.155 Sum_probs=209.5
Q ss_pred CCchhHHHHHHHHHHHhCC-C-cEEEeC-CHHHHHHHHHHH----hccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEE
Q 009172 207 YGNPTTVVVEEKMSALEGA-E-STVIMA-SGMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~-~-~~i~~s-SG~~Ai~~al~a----ll~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
......+++|++||+++|+ + +.|+++ +++++++.++.+ ++++||+|++++++|++....+...++..|++++.
T Consensus 64 ~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~ 143 (406)
T PRK09295 64 QATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRV 143 (406)
T ss_pred HHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEE
Confidence 3445678899999999996 2 445444 556999988876 46899999999999998776666666778999888
Q ss_pred eCC-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEE
Q 009172 280 IDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLH 353 (541)
Q Consensus 280 vd~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~ 353 (541)
++. .|+++|++++++ +|++|++++|+||||.++|+++|.++|+++|+++++|++++.+. ..+...+++|+++.
T Consensus 144 v~~~~~~~~d~~~l~~~i~~-~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~ 222 (406)
T PRK09295 144 IPLNPDGTLQLETLPALFDE-RTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVF 222 (406)
T ss_pred EecCCCCCCCHHHHHHhcCC-CcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEe
Confidence 763 378999999987 59999999999999999999999999999999999999987653 23444578999999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhh----------------------hcCCCccHHHHHHHHHhHHHHH----
Q 009172 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH----------------------VLGGALNPNAAYLIIRGMKTLH---- 407 (541)
Q Consensus 354 S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~----------------------~~g~~~s~~~a~l~l~~l~tl~---- 407 (541)
|+||++|++| .|+++.++++++.+..... ...++.+....+.+..+++.+.
T Consensus 223 s~~K~~gp~G---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~ 299 (406)
T PRK09295 223 SGHKLYGPTG---IGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGL 299 (406)
T ss_pred ehhhccCCCC---cEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCH
Confidence 9999888776 5888888887665432110 0112333333333334444332
Q ss_pred -HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCC
Q 009172 408 -LRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 408 -~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G 486 (541)
...++..+.++++.+.|.+.+.++ +.-|. ..+++++|.+++. ....+.+.|...+|.++.|
T Consensus 300 ~~i~~~~~~l~~~l~~~l~~~~~~~-~~~~~---------------~~~~iv~~~~~~~--~~~~~~~~L~~~gI~v~~g 361 (406)
T PRK09295 300 NNIAEYEQNLMHYALSQLESVPDLT-LYGPQ---------------NRLGVIAFNLGKH--HAYDVGSFLDNYGIAVRTG 361 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEE-EeCCC---------------CCceEEEEEECCc--CHHHHHHHHHhCCeEEecc
Confidence 222344456677777777776653 32221 0246899998752 2233444555667888877
Q ss_pred CcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 487 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 487 ~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
..+.. .....+|. ++.||+|++..++++.++.|.++|++
T Consensus 362 ~~c~~--------------~~~~~~~~-~~~iRiS~~~ynt~~did~l~~~l~~ 400 (406)
T PRK09295 362 HHCAM--------------PLMAYYNV-PAMCRASLAMYNTHEEVDRLVAGLQR 400 (406)
T ss_pred ccchH--------------HHHHHHCC-CCEEEEEccCCCCHHHHHHHHHHHHH
Confidence 54321 01223343 36899999999999999999998875
No 52
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=1.8e-25 Score=237.62 Aligned_cols=293 Identities=17% Similarity=0.172 Sum_probs=205.7
Q ss_pred hhHHHHHHHHHHHhCCC--cE-EEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 210 PTTVVVEEKMSALEGAE--ST-VIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~--~~-i~~sSG~~Ai~~al~al----l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...+++|+.+|+++|++ +. ++++++++++++++.++ +++||+||+++++|++.+..+...++..|+++++++.
T Consensus 60 ~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 139 (398)
T TIGR03392 60 ARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPI 139 (398)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEec
Confidence 45678999999999973 34 45555669999999887 5899999999999998765555566778999888864
Q ss_pred -----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEECCc
Q 009172 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSAT 356 (541)
Q Consensus 283 -----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~S~s 356 (541)
.|++++++++++ +|++|++++|+||||.+.|+++|.++|+++|+++++|++++.+. ..+....++|+++.|+|
T Consensus 140 ~~~~~~~~~~l~~~i~~-~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~ 218 (398)
T TIGR03392 140 GADLLPDIRQLPELLTP-RTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGH 218 (398)
T ss_pred CCCCCcCHHHHHHHhcc-CceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecc
Confidence 278999999987 49999999999999999999999999999999999999986542 23444568999999999
Q ss_pred cccCCCCCceEEEEEeChHHHHHHHHHhh---------------------hcCCCccHHHHHHHHHhHHHH-----HHHH
Q 009172 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLRV 410 (541)
Q Consensus 357 K~lgg~g~v~gG~vv~~~~li~~l~~~~~---------------------~~g~~~s~~~a~l~l~~l~tl-----~~r~ 410 (541)
|.+|+.| .|+++.++++++.+..+.. ...++.+......+..+++.+ ....
T Consensus 219 K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~ 295 (398)
T TIGR03392 219 KLYGPTG---IGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAE 295 (398)
T ss_pred cccCCCc---eEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Confidence 9888765 6889999888776643210 011223322222333333332 1223
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCccc
Q 009172 411 QQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCES 490 (541)
Q Consensus 411 ~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~s 490 (541)
++..+.++++.+.|++.+++.....+ .+++++|.+++. ....+.+.|+..+|.++.|..++
T Consensus 296 ~~~~~l~~~l~~~l~~l~g~~~~~~~-----------------~~~i~~~~~~~~--~~~~l~~~L~~~gI~v~~g~~~~ 356 (398)
T TIGR03392 296 AWSVSLADLAEERLAQLPGFRSFRCP-----------------GSSLLAFDFAGV--HHSDLAALLAESGIALRAGQHCA 356 (398)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEeCCC-----------------CCcEEEEEeCCc--CHHHHHHHHHhCCEEEecCccch
Confidence 44445677777788777665421111 245889888742 23456666666788888775432
Q ss_pred ceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 491 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 491 l~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
. .....+|. ++.||+|++..++++.++.+.++|++
T Consensus 357 ~--------------~~~~~~g~-~~~iRvS~~~~~t~~ei~~l~~~l~~ 391 (398)
T TIGR03392 357 Q--------------PLMAALGV-SGTLRASFAPYNTQQDVDALVDAVGA 391 (398)
T ss_pred H--------------HHHHHhCC-CCEEEEEeeccCCHHHHHHHHHHHHH
Confidence 1 11222343 47999999998877777777777653
No 53
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=7.1e-25 Score=232.33 Aligned_cols=274 Identities=18% Similarity=0.195 Sum_probs=195.1
Q ss_pred CchhHHHHHHHHHHHh----CC----Cc-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEE
Q 009172 208 GNPTTVVVEEKMSALE----GA----ES-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~----g~----~~-~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~ 278 (541)
......+||++||+.+ |. ++ .++++++++|+..++++++.|||+||+++|.|..+... ....|.++.
T Consensus 63 ~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~----~~~~gg~~v 138 (393)
T COG0436 63 PSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAA----VKLAGGKPV 138 (393)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHH----HHhcCCEEE
Confidence 4556667888887665 31 24 55555556999999999999999999999999986643 344577766
Q ss_pred EeCC--------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc-----
Q 009172 279 VIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----- 342 (541)
Q Consensus 279 ~vd~--------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~----- 342 (541)
.++. .|+++|++++++ +||+|++++||||||.+++ +++|+++|++||++||.||+|.......
T Consensus 139 ~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s 217 (393)
T COG0436 139 PVPLDEEENGFKPDLEDLEAAITP-KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPS 217 (393)
T ss_pred EEeCCcCccCCcCCHHHHHhhcCc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCC
Confidence 6652 169999999998 6999999999999999998 6788999999999999999987644321
Q ss_pred cccc----CCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCCccHHHHHHHHHhHH------HHHHHHH
Q 009172 343 ALSL----GADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQ 411 (541)
Q Consensus 343 ~l~~----gaDivv~S~sK~lgg~g~v~gG~vv~~-~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~------tl~~r~~ 411 (541)
.+.. ..-|+++|+||.++-.|. ..||++++ +++++.+.+.+.....+.+....+++...|+ .+....+
T Consensus 218 ~~~~~~~~~~~i~i~s~SK~~~mtGw-RvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~ 296 (393)
T COG0436 218 ILELAGARDRTITINSFSKTYGMTGW-RIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMRE 296 (393)
T ss_pred HhhcCCCcceEEEEeccccccccccc-ceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHH
Confidence 1211 235889999999997775 47888888 7888888766666655555555544444443 2233335
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---HHHHHHHHHHcCCCceeecCCCc
Q 009172 412 QQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 412 ~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~---~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
...++++.+.+.|.+.+++..+..|. ++..++..++.. .+-+.++++ ..++++..|..
T Consensus 297 ~~~~rrd~l~~~l~~~~g~~~~~~p~----------------Ga~Y~~~~i~~~~d~~~f~~~Ll~---~~gV~v~PG~~ 357 (393)
T COG0436 297 EYRERRDLLVEALNEIGGLSVVKPPE----------------GAFYLFPKIPELLDSEEFAKKLLE---EAGVAVVPGSG 357 (393)
T ss_pred HHHHHHHHHHHHHHhcCCeeeccCCC----------------eeEEEEeecCCCCCHHHHHHHHHH---hCCEEEecccc
Confidence 56788888999999887665444342 345667777642 233444444 34678888765
Q ss_pred ccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCC
Q 009172 489 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED 526 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed 526 (541)
+.. ....++||||++..+
T Consensus 358 Fg~--------------------~~g~~~vRis~~~~~ 375 (393)
T COG0436 358 FGE--------------------PPGEGYVRLSLATSE 375 (393)
T ss_pred cCC--------------------CCCCCeEEEEEecCH
Confidence 432 024689999999765
No 54
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.5e-24 Score=230.17 Aligned_cols=286 Identities=16% Similarity=0.176 Sum_probs=198.1
Q ss_pred hhHHHHHHHHHHHhCC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC--
Q 009172 210 PTTVVVEEKMSALEGA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~----~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~-- 282 (541)
+..+.+++.+++..|. ++.+++++|+ +++..++.+++++||+|++++|.|..... .+...|+++++++.
T Consensus 69 ~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~~~~ 144 (389)
T PRK05957 69 PLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM----AITMAGCQPILVPTDD 144 (389)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH----HHHhcCCEEEEeecCC
Confidence 5567778888888784 3456656555 89999999999999999999999987543 23456888877753
Q ss_pred ---CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc-----c----cccC
Q 009172 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-----A----LSLG 347 (541)
Q Consensus 283 ---~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~-----~----l~~g 347 (541)
.|++++++++++ ++|+|++.+|+||||.+++ +++|+++|+++|+++|+|++|....... . ....
T Consensus 145 ~~~~d~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 223 (389)
T PRK05957 145 NYQLQPEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGN 223 (389)
T ss_pred CCCcCHHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccC
Confidence 378999999987 5999999999999999998 8889999999999999999986433211 1 1112
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHHH
Q 009172 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAEI 423 (541)
Q Consensus 348 aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~----tl~~r~~~~~~na~~la~~ 423 (541)
..+++.|+||.+|.+|. ..|++++++++++++.......+...+......+...++ .+....++..++++.+.+.
T Consensus 224 ~~i~~~S~SK~~g~~Gl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~ 302 (389)
T PRK05957 224 HTISLYSLSKAYGFASW-RIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKS 302 (389)
T ss_pred cEEEEecchhhccCccc-eeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 45889999999987764 578999999999998877665554445444444444443 2444455566777788888
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccceecCccccccc
Q 009172 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 424 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
|++++.+..+..| ..|.++|++++.+ ....+|.+.+ +..++.+..|..+..
T Consensus 303 L~~~~~~~~~~~~----------------~gg~~~~~~~~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~----------- 354 (389)
T PRK05957 303 LGQLQDRCTLHPA----------------NGAFYCFLKVNTD-LNDFELVKQLIREYRVAVIPGTTFGM----------- 354 (389)
T ss_pred HHhcCCCccccCC----------------CeeEEEEEeCCCC-CChHHHHHHHHHHCCEEEccchhhCC-----------
Confidence 8876543222111 1355678888643 2234555555 345777777654311
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHH---HHHHHHHHHh
Q 009172 503 LSQSERLKYGIMDNLVRFSFGVEDFED---LKADVLQALH 539 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~Ed~ed---li~dL~~AL~ 539 (541)
-.+++||||+|..+.++ .++.|.+.++
T Consensus 355 ----------~~~~~iRis~~~~~~~~l~~~~~~l~~~~~ 384 (389)
T PRK05957 355 ----------KNGCYLRIAYGALQKATAKEGIERLVQGLK 384 (389)
T ss_pred ----------CCCCEEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 02469999999755544 4444444444
No 55
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=1.2e-24 Score=233.44 Aligned_cols=299 Identities=18% Similarity=0.193 Sum_probs=208.4
Q ss_pred hhHHHHHHHHHHHhCCC--c-EEEeCCHHHHHHHHHHH----hccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 210 PTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLA----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~--~-~i~~sSG~~Ai~~al~a----ll~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...+++++.||+++|.+ + +++++++++++..++.+ .+++||+|+++.++|++.+..+....+..|+++++++.
T Consensus 76 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~ 155 (424)
T PLN02855 76 DAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGL 155 (424)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEec
Confidence 45678999999999973 3 45555566999988875 36899999999999998877776666778999888764
Q ss_pred -----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEECCc
Q 009172 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSAT 356 (541)
Q Consensus 283 -----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~S~s 356 (541)
.|++++++++++ +|++|++++|+||||.++|+++|.++|+++|+++++|++++.+. ..+..++++|+++.|+|
T Consensus 156 ~~~~~~~~~~l~~~i~~-~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 234 (424)
T PLN02855 156 TPDEVLDVEQLKELLSE-KTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSH 234 (424)
T ss_pred CCCCCcCHHHHHHHhcc-CceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecc
Confidence 278999999987 59999999999999999999999999999999999999987543 34445678999999999
Q ss_pred cccCCCCCceEEEEEeChHHHHHHHHHhh---------------------hcCCCccHHHHHHHHHhHHHH-----HHHH
Q 009172 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HLRV 410 (541)
Q Consensus 357 K~lgg~g~v~gG~vv~~~~li~~l~~~~~---------------------~~g~~~s~~~a~l~l~~l~tl-----~~r~ 410 (541)
|++|++| .|+++.++++++++..+.. ...++.+....+.+..+++.+ +...
T Consensus 235 K~~gp~G---~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~ 311 (424)
T PLN02855 235 KMCGPTG---IGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIH 311 (424)
T ss_pred cccCCCc---cEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 9887665 6888888887766543210 001122222222223333322 2222
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-ceeecCCCcc
Q 009172 411 QQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCE 489 (541)
Q Consensus 411 ~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~-~iavS~G~~~ 489 (541)
++..+.++++.+.|++.++++ ++.|. .+.+. ..+++++|.+++. ....+.+.|... +|.++.|..+
T Consensus 312 ~~~~~l~~~l~~~L~~~~g~~-i~~~~-~~~~~---------~r~~~v~~~~~~~--~~~~v~~~L~~~~gI~v~~g~~c 378 (424)
T PLN02855 312 EYEVELGTYLYEKLSSVPGVR-IYGPK-PSEGV---------GRAALCAFNVEGI--HPTDLSTFLDQQHGVAIRSGHHC 378 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCC-ccccc---------CcccEEEEEECCc--CHHHHHHHhcccCCEEEechhhh
Confidence 344455667777777777664 33321 11010 1367999999752 234567777655 8888877543
Q ss_pred cceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+. ......|+ ++.||+|++..++++.++.|.++|++
T Consensus 379 ~~--------------~~~~~~g~-~~~iRiS~~~ynt~~di~~l~~~l~~ 414 (424)
T PLN02855 379 AQ--------------PLHRYLGV-NASARASLYFYNTKEEVDAFIHALKD 414 (424)
T ss_pred hH--------------HHHHHhCC-CCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 21 01123454 46899999998888888888877764
No 56
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.94 E-value=1.1e-24 Score=231.33 Aligned_cols=299 Identities=14% Similarity=0.122 Sum_probs=204.1
Q ss_pred CCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~ 283 (541)
|+|.. ++.+||+++|+++|.+++++++||+.|+..++.+++++||+|+++++.|+++...+ .+. +.++.+++..
T Consensus 39 yg~~~--~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~~--~l~--~~~~~~~~~~ 112 (392)
T PLN03227 39 YGTID--AHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAKRGDLLVVDRGVNEALLVGV--SLS--RANVRWFRHN 112 (392)
T ss_pred cCChH--HHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCCCCCEEEEeccccHHHHHHH--HHc--CCeEEEeCCC
Confidence 66655 79999999999999999999999999988999999999999999999999876543 122 3566667766
Q ss_pred CHHHHHH---hccC----------CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc---------
Q 009172 284 DMEGLEA---ALNN----------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--------- 341 (541)
Q Consensus 284 dle~Le~---ai~~----------~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~--------- 341 (541)
|.+++++ .+.+ .++++|++|+|.||+|.+.|+++|.++|++||+++|+||+++.+...
T Consensus 113 d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~ 192 (392)
T PLN03227 113 DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEH 192 (392)
T ss_pred CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHH
Confidence 6655554 3321 14899999999999999999999999999999999999998744321
Q ss_pred ---cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH--hhhcCCCccHHHHHHHHHhHHHH---HHHHHHH
Q 009172 342 ---KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL--HHVLGGALNPNAAYLIIRGMKTL---HLRVQQQ 413 (541)
Q Consensus 342 ---~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~--~~~~g~~~s~~~a~l~l~~l~tl---~~r~~~~ 413 (541)
.| ..++|+++.|++|++++ ++|++++++++++.++.. ...+++.++|..++.++..++.. +.+.++.
T Consensus 193 ~g~~p-~~~~Div~~slsk~~g~----~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l 267 (392)
T PLN03227 193 AGLKP-MVHAEIVTFSLENAFGS----VGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRL 267 (392)
T ss_pred cCCCC-CCCceEEEeechhhhhc----cCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 12 24789999999999874 368888998888766543 23456666677666665555432 3456677
Q ss_pred HHHHHHHHHHHHh--CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHH--------HHHHHHHHcCCCceee
Q 009172 414 NSTALRMAEILEA--HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT--------ATIKFIDALKIPYIAP 483 (541)
Q Consensus 414 ~~na~~la~~L~~--~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~--------~~~~~l~~L~~~~iav 483 (541)
.++.+++.+.|++ +|.+..+.- ++.-. ....|+|+.|++.+... ....+.+.+...|+.+
T Consensus 268 ~~~~~~l~~~L~~~~~~~~~~~rg-~~~~~---------~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 337 (392)
T PLN03227 268 HDSIANLYSTLTNSSHPYALKLRN-RLVIT---------SDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAV 337 (392)
T ss_pred HHHHHHHHHHHHhcCCcccccccc-ccccC---------CCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEE
Confidence 7888888888874 232322221 11000 01247799999954211 1235666665445444
Q ss_pred cCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 484 SFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 484 S~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
..-+.......| -+++..||+++...++++.++.+.++|+
T Consensus 338 ~~~~~~~~~~~~----------------~~P~~~iR~~~~~~~t~eei~~~~~~l~ 377 (392)
T PLN03227 338 VSTGGHVKKFLQ----------------LVPPPCLRVVANASHTREDIDKLLTVLG 377 (392)
T ss_pred EecccccCCcCC----------------CCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 221111100001 1245689999988766665555555544
No 57
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.5e-24 Score=231.40 Aligned_cols=284 Identities=15% Similarity=0.196 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHhCC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC----
Q 009172 212 TVVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 212 ~~~Le~~LA~l~g~-----~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
.+.+.+.+++++|. +++++++++++++.+++.+++++||+|+++.|+|..... .++..|.++..++.
T Consensus 84 R~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~----~~~~~g~~v~~v~~~~~~ 159 (405)
T PRK06207 84 RELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRK----LVEFFEGEMVPVQLDYLS 159 (405)
T ss_pred HHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHH----HHHHcCCEEEEEeccccC
Confidence 34444445555573 234444445599999999999999999999999988653 34455776665542
Q ss_pred ------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc----ccc-c---
Q 009172 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-S--- 345 (541)
Q Consensus 283 ------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~----~~l-~--- 345 (541)
.|+++|++++++ ++++|++++|+||||.+++ +++|+++|+++|++||+||+|...... .++ .
T Consensus 160 ~~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ 238 (405)
T PRK06207 160 ADKRAGLDLDQLEEAFKA-GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPI 238 (405)
T ss_pred cccCCCcCHHHHHHhhhh-cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCC
Confidence 278999999877 4899999999999999998 667888899999999999998764321 111 1
Q ss_pred -cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHHHHH
Q 009172 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRM 420 (541)
Q Consensus 346 -~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~----tl~~r~~~~~~na~~l 420 (541)
...-+++.|+||.++.+| ...||+++++++++++......+....+.+...++...++ .+..++++..+++..+
T Consensus 239 ~~~~vi~i~SfSK~~~lpG-lRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l 317 (405)
T PRK06207 239 DPENVITIMGPSKTESLSG-YRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDL 317 (405)
T ss_pred CcCcEEEEecchhhccCcc-cceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 123489999999998555 4589999999999988876655544444443333333332 3555666667777788
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccceecCcccc
Q 009172 421 AEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 421 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~~ 499 (541)
.+.|++++.+. +..| ..|.++|++++........|.+.+. ..++.+..|..+..
T Consensus 318 ~~~L~~~~~~~-~~~p----------------~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~-------- 372 (405)
T PRK06207 318 LRVLRGVEGVF-VRAP----------------QAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSP-------- 372 (405)
T ss_pred HHHHhcCCCce-ecCC----------------CeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCC--------
Confidence 88887665432 2222 1467889998741112345666663 45777776644310
Q ss_pred cccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009172 500 YWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL~~AL~ 539 (541)
..++++|||++.+ +.++-++.|.++|+
T Consensus 373 -------------~~~~~~Ris~~~~~~~l~~al~rl~~~l~ 401 (405)
T PRK06207 373 -------------HTADSIRLNFSQDHAAAVAAAERIAQLIE 401 (405)
T ss_pred -------------CCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1257999999973 22333444444443
No 58
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.94 E-value=7.7e-25 Score=228.63 Aligned_cols=289 Identities=18% Similarity=0.248 Sum_probs=216.7
Q ss_pred CCCCCCchhHHHHHHHHHHHhC-CC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEE
Q 009172 203 EYGRYGNPTTVVVEEKMSALEG-AE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g-~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
.+.||++|...+|++++++++| .+ +.|+.++|+ +.|..++++++.+||.|+++.|+|..+. ..++..|+++..
T Consensus 50 ~~~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~----~~a~~~g~~~~~ 125 (356)
T COG0079 50 KLNRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYE----IAAQLAGAEVVK 125 (356)
T ss_pred hhccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHH----HHHHhcCCeEEE
Confidence 5789999999999999999999 44 678878888 8999999999999999999999997744 345667888888
Q ss_pred eCC----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEEcCCCCCCcccccc----cCCc
Q 009172 280 IDP----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKALS----LGAD 349 (541)
Q Consensus 280 vd~----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~--gillvvDea~a~~~~~~~l~----~gaD 349 (541)
++. .|++.+.+++++ ++++||+++||||||...+.++|.+++... +.+||+||+|..+....... ...-
T Consensus 126 v~~~~~~~d~~~~~~~~~~-~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nl 204 (356)
T COG0079 126 VPLKEFRLDLDAILAAIRD-KTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNL 204 (356)
T ss_pred ecccccccCHHHHHHhhhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCE
Confidence 775 578999999887 599999999999999999988888887754 88999999988765532222 2335
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccH-HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 009172 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP-NAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHP 428 (541)
Q Consensus 350 ivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~-~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p 428 (541)
+++.||||.||-.| +..|+.++++++++.+++.+..+...... ..+..+++.-+.+....++..+.++++.+.|++++
T Consensus 205 ivlRTfSKa~gLAG-lRlGy~ia~~~~i~~l~~vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~ 283 (356)
T COG0079 205 IVLRTFSKAFGLAG-LRVGYAIANPELIAALNKVRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG 283 (356)
T ss_pred EEEEecHHhhhcch-hceeeccCCHHHHHHHHHhcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 89999999998776 45789999999999999988766543222 22222223335566677778888999999999876
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHH
Q 009172 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
+..+ +|. .+|++.++++. .. ...+.+.|...|+-+..-+
T Consensus 284 -~~~v-~pS----------------~aNFvlv~~~~-~~-~~~l~~~L~~~giivR~~~--------------------- 322 (356)
T COG0079 284 -LFGV-FPS----------------QANFVLVRVPD-AE-AAALAEALLKKGILVRDCS--------------------- 322 (356)
T ss_pred -CCee-cCC----------------CCcEEEEECCC-cc-HHHHHHHHHHCCEEEEeCC---------------------
Confidence 4333 332 47899999874 23 4456666655555444210
Q ss_pred HhcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009172 509 LKYGIMDNLVRFSFGVE-DFEDLKADVLQALH 539 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~E-d~edli~dL~~AL~ 539 (541)
. .+..++++|+|+|.+ +.+.+++.|.+.+.
T Consensus 323 ~-~~~~~~~lRitvgt~een~~ll~AL~~~~~ 353 (356)
T COG0079 323 S-VGLLPGYLRITVGTPEENDRLLAALREVLK 353 (356)
T ss_pred C-CCCCCCeEEEEeCCHHHHHHHHHHHHHHHh
Confidence 0 133568999999974 45777777776664
No 59
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=1.5e-24 Score=230.80 Aligned_cols=299 Identities=21% Similarity=0.235 Sum_probs=207.3
Q ss_pred CchhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 208 GNPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~---~~i~~sSG~~Ai~~al~al----l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.....+++++.+++++|++ +.++++++++++.+++.++ +++||+|++++++|++....+.......|++++.+
T Consensus 60 ~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v 139 (403)
T TIGR01979 60 ATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFI 139 (403)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEE
Confidence 3346778999999999975 3555555668988888764 68899999999999987766666666779988888
Q ss_pred CC-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc-ccccccCCcEEEEC
Q 009172 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHS 354 (541)
Q Consensus 281 d~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~-~~~l~~gaDivv~S 354 (541)
+. .|++++++++++ ++++|++.+|+||||.+.|+++|.++|+++|+++++|++++.+.. .+....++|+++.|
T Consensus 140 ~~~~~~~~~~~~l~~~i~~-~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s 218 (403)
T TIGR01979 140 PLDDDGTLDLDDLEKLLTE-KTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFS 218 (403)
T ss_pred ecCCCCCCCHHHHHHHhcc-CCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEe
Confidence 64 378999999987 599999999999999999999999999999999999999876532 44456789999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhh---------------------hcCCCccHHHHHHHHHhHHHH-----HH
Q 009172 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-----HL 408 (541)
Q Consensus 355 ~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~---------------------~~g~~~s~~~a~l~l~~l~tl-----~~ 408 (541)
+||++|+.| .|+++.++++++.+..... ...++.+....+.+..+++.+ +.
T Consensus 219 ~~K~~gp~G---~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~ 295 (403)
T TIGR01979 219 GHKMYGPTG---IGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLEN 295 (403)
T ss_pred cccccCCCC---ceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHH
Confidence 999988665 6888888887766532110 001222332333333333332 22
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCc
Q 009172 409 RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 409 r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
..++..+.++.+.+.|++.+.++ +..|.- + ...++++.|.+++. ....+.+.|+..++.++.|..
T Consensus 296 ~~~~~~~l~~~l~~~l~~~~g~~-~~~~~~---~---------~~~~~~v~~~~~~~--~~~~~~~~L~~~gI~v~~g~~ 360 (403)
T TIGR01979 296 IEAHEHELTAYALERLGEIPGLR-IYGPRD---A---------EDRGGIISFNVEGV--HPHDVGTILDEEGIAVRSGHH 360 (403)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EeCCCC---c---------cccCceEEEEeCCc--CHHHHHHHHhhCCEEEcchhh
Confidence 34455566677777777776653 333321 0 01367899998742 234566677777888877653
Q ss_pred ccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 489 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
++. | ....+|. ++.||||++..++++.++.|.++|+.
T Consensus 361 ~~~---~-----------~~~~~~~-~~~iRiS~~~~~t~~di~~l~~~l~~ 397 (403)
T TIGR01979 361 CAQ---P-----------LMRRFGV-PATCRASFYIYNTEEDIDALVEALKK 397 (403)
T ss_pred hhH---H-----------HHHHhCC-CCEEEEEeccCCCHHHHHHHHHHHHH
Confidence 211 1 1122332 47899999987776666666666653
No 60
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=1.3e-24 Score=228.65 Aligned_cols=293 Identities=21% Similarity=0.246 Sum_probs=206.9
Q ss_pred hhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhcc---CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC
Q 009172 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~---~~i~~sSG~~Ai~~al~all~---~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~ 283 (541)
....++++.+++++|.+ +.++++++++++.+++.++.. +||+|++++++|.+.+..+....+..|+++++++.+
T Consensus 43 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 122 (373)
T cd06453 43 DAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD 122 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC
Confidence 45678899999999976 456667777999999999877 899999999999987655555556778888888643
Q ss_pred -----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc-ccccccCCcEEEECCcc
Q 009172 284 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATK 357 (541)
Q Consensus 284 -----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~-~~~l~~gaDivv~S~sK 357 (541)
|++++++++++ ++++|++++|+||||.+.|+++|.++|+++|++|++|+++..+.. ....+.|+|+++.|++|
T Consensus 123 ~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 201 (373)
T cd06453 123 DDGQLDLEALEKLLTE-RTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHK 201 (373)
T ss_pred CCCCcCHHHHHHHhcC-CceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEecccc
Confidence 78999999987 599999999999999999999999999999999999999875543 23345689999999999
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHHhhh--------------------c-CCCccHHHHHHHHHhHHH-----HHHHHH
Q 009172 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHV--------------------L-GGALNPNAAYLIIRGMKT-----LHLRVQ 411 (541)
Q Consensus 358 ~lgg~g~v~gG~vv~~~~li~~l~~~~~~--------------------~-g~~~s~~~a~l~l~~l~t-----l~~r~~ 411 (541)
++++.+ .|+++.++++++.++..... + .++.+......+..+++. +..+.+
T Consensus 202 ~~~~~g---~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~ 278 (373)
T cd06453 202 MLGPTG---IGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAA 278 (373)
T ss_pred ccCCCC---cEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 999854 68898988888766543210 0 112222222222223332 233445
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccc
Q 009172 412 QQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 412 ~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
+..+.++++.+.|++++.+..+ .+. ...+++++|.+++ ....++.+.|+..++.++.|..+..
T Consensus 279 ~~~~~~~~l~~~l~~~~~~~~~-~~~--------------~~~~~~~~~~~~~--~~~~~i~~~l~~~gi~i~~g~~~~~ 341 (373)
T cd06453 279 HEHELTAYALERLSEIPGVRVY-GDA--------------EDRAGVVSFNLEG--IHPHDVATILDQYGIAVRAGHHCAQ 341 (373)
T ss_pred HHHHHHHHHHHHHhcCCCeEEe-CCc--------------cccCCeEEEEECC--cCHHHHHHHHHHCCEEeccCccchh
Confidence 5567777888888887765433 111 1135689999864 2344566666656777665543211
Q ss_pred eecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
+ ....+|. ++.||+|++..++++.++.|.++|
T Consensus 342 ---~-----------~~~~~~~-~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 342 ---P-----------LMRRLGV-PGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred ---H-----------HHHHhCC-CCeEEEEecCCCCHHHHHHHHhhC
Confidence 0 1112332 478999999988888888777664
No 61
>PRK07324 transaminase; Validated
Probab=99.94 E-value=2.2e-24 Score=227.59 Aligned_cols=282 Identities=16% Similarity=0.197 Sum_probs=192.0
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEE
Q 009172 201 SFEYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g~---~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v 277 (541)
.+.|+.. ....+||+.||++++. +++++++++++|+.+++.+++++||+|+++.|.|.... ..++..|.++
T Consensus 55 ~~~Y~~~--~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~g~~v 128 (373)
T PRK07324 55 KLTYGWI--EGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLY----DIPESLGAEV 128 (373)
T ss_pred CccCCCC--CCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCEE
Confidence 3456542 2456899999998753 34555555669999999999999999999999998754 3445568888
Q ss_pred EEeCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc----c
Q 009172 278 TVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A 343 (541)
Q Consensus 278 ~~vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~----~ 343 (541)
++++. .|++++++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|....... .
T Consensus 129 ~~v~~~~~~~~~~d~~~l~~~~~~-~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~ 207 (373)
T PRK07324 129 DYWQLKEENGWLPDLDELRRLVRP-NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSI 207 (373)
T ss_pred EEEecccccCCCCCHHHHHHhCCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCCh
Confidence 77753 278899998877 5999999999999999999 8889999999999999999986533211 1
Q ss_pred cc-cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHH-HHHHHHHHH
Q 009172 344 LS-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLR-VQQQNSTAL 418 (541)
Q Consensus 344 l~-~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---l~~r-~~~~~~na~ 418 (541)
.. ....|++.|+||.++.+| ...||+++++++++.++..+.......+....+++...++. +..+ .+...++.+
T Consensus 208 ~~~~~~~I~~~s~SK~~~~~G-~RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~ 286 (373)
T PRK07324 208 ADLYEKGISTNSMSKTYSLPG-IRVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLA 286 (373)
T ss_pred hhccCCEEEEecchhhcCCcc-ceeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 11 123588999999998666 35789999999999988876544444444444444444432 2222 233446677
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccceecCcc
Q 009172 419 RMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 419 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~ 497 (541)
.+.++|++++.+. +..|. .|..+++.++.+ .....|.+.+ +..++.+..|..+.
T Consensus 287 ~l~~~l~~~~~~~-~~~p~----------------gg~~~~i~~~~~-~~~~~~~~~ll~~~gv~v~pg~~F~------- 341 (373)
T PRK07324 287 ILDEWVAKEPRVS-YVKPK----------------AVSTSFVKLDVD-MPSEDFCLKLLKETGVLLVPGNRFD------- 341 (373)
T ss_pred HHHHHHhcCCCce-EECCC----------------ceEEEEEEeCCC-CCHHHHHHHHHHhcCEEEECccccC-------
Confidence 7788888776543 22331 344556666532 2334555553 34466666664321
Q ss_pred cccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHH
Q 009172 498 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKA 532 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~ 532 (541)
.+++||||++.. .+.+.+
T Consensus 342 ----------------~~~~iRis~~~~-~~~l~~ 359 (373)
T PRK07324 342 ----------------LEGHVRIGYCCD-TETLKK 359 (373)
T ss_pred ----------------CCCeEEEEecCC-HHHHHH
Confidence 146899999963 343333
No 62
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=2.6e-24 Score=226.90 Aligned_cols=282 Identities=15% Similarity=0.172 Sum_probs=198.7
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC-----
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~----- 283 (541)
+|...++++.+|+++|.+..+++++|++++..++.+++++||+|+++.+.|.+.+. .++..|+++..++..
T Consensus 50 ~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~----~~~~~g~~~~~~~~~~~~~~ 125 (370)
T TIGR02539 50 KPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYV----AAERAGLNVKEVPHTGHPEY 125 (370)
T ss_pred chHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHH----HHHHcCCEEEEEecCCcccC
Confidence 45788999999999999999999999999999999999999999999999877653 345678888888754
Q ss_pred --CHHHHHHhccC------CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEEC
Q 009172 284 --DMEGLEAALNN------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (541)
Q Consensus 284 --dle~Le~ai~~------~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~S 354 (541)
|+++|++++++ .++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. .......++|+++.|
T Consensus 126 ~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s 205 (370)
T TIGR02539 126 KVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGS 205 (370)
T ss_pred CcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEee
Confidence 89999998853 248899999999999999999999999999999999999988753 234445679999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhhhc--------CCCccHHHHHHHHHhHHHHHH---HHHHHHHHHHHHHHH
Q 009172 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL--------GGALNPNAAYLIIRGMKTLHL---RVQQQNSTALRMAEI 423 (541)
Q Consensus 355 ~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~--------g~~~s~~~a~l~l~~l~tl~~---r~~~~~~na~~la~~ 423 (541)
+||++++++ ..|++++++++++.++.....+ +.......+..+...++.... +..+..++++++.+.
T Consensus 206 ~sK~~~~~g--~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~ 283 (370)
T TIGR02539 206 GHKSMAASG--PCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAE 283 (370)
T ss_pred CcccccCCC--CEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998655 3689999999998887654322 111111122222233333222 233445566788888
Q ss_pred HHhCCCceEE-eCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------HHHHHHHHHHcCCCcee-ecCCCcccceec
Q 009172 424 LEAHPKVKRV-HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALKIPYIA-PSFGGCESIVDQ 494 (541)
Q Consensus 424 L~~~p~v~~V-~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-------~~~~~~~l~~L~~~~ia-vS~G~~~sl~~~ 494 (541)
|++.+ +..+ .+|. ..+++.|++++- ......+.+.|...++. +.
T Consensus 284 L~~~g-~~~~~~~~s----------------~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir---------- 336 (370)
T TIGR02539 284 LEDIG-FIQLGQKPK----------------EHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR---------- 336 (370)
T ss_pred HHhCC-cEEEccCCC----------------cCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc----------
Confidence 88753 2211 1121 356788876531 11234566666655542 11
Q ss_pred CcccccccCCHHHHHhcCCCCCeEEEEe--c-CCCHHHHHHHHHHHHhh
Q 009172 495 PAIMSYWDLSQSERLKYGIMDNLVRFSF--G-VEDFEDLKADVLQALHA 540 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSv--G-~Ed~edli~dL~~AL~~ 540 (541)
+ | .+++||+|+ + .|+.+.+++.|++.+++
T Consensus 337 ~----------------~-~~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 337 S----------------G-QTKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred C----------------C-cceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 1 1 145899997 4 24566777777666653
No 63
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=3.6e-24 Score=224.83 Aligned_cols=223 Identities=13% Similarity=0.228 Sum_probs=170.3
Q ss_pred CCCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
..+...+|...++++++|+++|.++++++++|++++.+++.+++++||+|+++.+.|.+.+. .+...|++++.++.
T Consensus 37 ~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~ 112 (361)
T cd06452 37 RLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYV----AAERAGLNVREVPN 112 (361)
T ss_pred ccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHH----HHHhcCCEEEEEec
Confidence 34445678999999999999999777877778899999999999999999999999887653 34566888887753
Q ss_pred -------CCHHHHHHhccC------CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCC
Q 009172 283 -------ADMEGLEAALNN------NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGA 348 (541)
Q Consensus 283 -------~dle~Le~ai~~------~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~ga 348 (541)
.|++++++++++ .++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. .....++|+
T Consensus 113 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~ 192 (361)
T cd06452 113 TGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGA 192 (361)
T ss_pred CCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCC
Confidence 368899888852 258999999999999999999999999999999999999987653 345567789
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhh--------cCCCccHHHHHHHHHhHHHHHH---HHHHHHHHH
Q 009172 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--------LGGALNPNAAYLIIRGMKTLHL---RVQQQNSTA 417 (541)
Q Consensus 349 Divv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~--------~g~~~s~~~a~l~l~~l~tl~~---r~~~~~~na 417 (541)
|+++.|+||++++++ .+|+++++++++++++..... .+.+......+.+...++.+.. +..+..+++
T Consensus 193 d~~~~s~~K~l~~~~--~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~ 270 (361)
T cd06452 193 DFIVGSGHKSMAASA--PIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKA 270 (361)
T ss_pred CEEEecCCccccCCC--CeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998665 478999999988887654422 2222222223333344443322 334444667
Q ss_pred HHHHHHHHhCCCce
Q 009172 418 LRMAEILEAHPKVK 431 (541)
Q Consensus 418 ~~la~~L~~~p~v~ 431 (541)
+++.+.|+++++++
T Consensus 271 ~~l~~~L~~l~g~~ 284 (361)
T cd06452 271 RWFVAELEKIEGIK 284 (361)
T ss_pred HHHHHHHhcCCCeE
Confidence 88899999887663
No 64
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=4.6e-24 Score=223.30 Aligned_cols=283 Identities=14% Similarity=0.196 Sum_probs=196.1
Q ss_pred CCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
+.+|+++...+||+++|++++.+ +.|++++|+ +++..++.+++++||+|++++|+|.... ...+..|.++..++
T Consensus 53 ~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~ 128 (351)
T PRK14807 53 VNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYS----VYSKIAGAVEIPVK 128 (351)
T ss_pred ccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEee
Confidence 46677777899999999999873 556666665 8899999999999999999999998643 33455677777765
Q ss_pred C-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccc---c-ccCCcEEE
Q 009172 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---L-SLGADLVL 352 (541)
Q Consensus 282 ~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~---l-~~gaDivv 352 (541)
. .|++++++++++.++|+|++++|+||||.+++.+++.+++++++.++|+|++|........ . .....+++
T Consensus 129 ~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~ 208 (351)
T PRK14807 129 LKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVL 208 (351)
T ss_pred cCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEE
Confidence 3 3689999998754699999999999999999999999999998889999999865432111 1 22346899
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH--HHHHHHHHHHHHHHHHHHHHHhCCCc
Q 009172 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK--TLHLRVQQQNSTALRMAEILEAHPKV 430 (541)
Q Consensus 353 ~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~--tl~~r~~~~~~na~~la~~L~~~p~v 430 (541)
.|+||.++.+| +..||+++++++++.++.....+ ..+.....++...++ .+..+++...+++..+.+.|++.+++
T Consensus 209 ~S~SK~~~~~G-lRiG~~v~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~ 285 (351)
T PRK14807 209 RTLSKAFGLAG-LRVGYAVANENILKYLNLVKSPY--NINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGI 285 (351)
T ss_pred ecchHhcccch-hceeeeecCHHHHHHHHHccCCC--CcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999998555 45799999999998887654322 234444444444443 34444555566777788888766554
Q ss_pred eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHh
Q 009172 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 510 (541)
Q Consensus 431 ~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~ 510 (541)
. + +|. .|+++++.++. . ..+.+.|...++.+..++..
T Consensus 286 ~-~-~~~----------------~~~~~~i~~~~-~---~~~~~~l~~~gV~v~~~~~~--------------------- 322 (351)
T PRK14807 286 K-V-YPS----------------KTNFILVKFKD-A---DYVYQGLLERGILVRDFSKV--------------------- 322 (351)
T ss_pred E-E-CcC----------------CccEEEEEcCC-H---HHHHHHHHHCCEEEEECCCC---------------------
Confidence 2 2 221 46678888863 2 33444444445555321100
Q ss_pred cCCCCCeEEEEecCC-CHHHHHHHHHHH
Q 009172 511 YGIMDNLVRFSFGVE-DFEDLKADVLQA 537 (541)
Q Consensus 511 ~gi~~~~IRlSvG~E-d~edli~dL~~A 537 (541)
.+ .++++|||++.. +.+.+++.|++.
T Consensus 323 ~~-~~~~iRis~~~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 323 EG-LEGALRITVSSCEANDYLINGLKEL 349 (351)
T ss_pred CC-CCCeEEEEcCCHHHHHHHHHHHHHh
Confidence 01 246899999964 345566666553
No 65
>PRK07179 hypothetical protein; Provisional
Probab=99.93 E-value=7.3e-24 Score=226.15 Aligned_cols=283 Identities=16% Similarity=0.174 Sum_probs=201.6
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHH
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~ 287 (541)
+.+...+||++||+++|.+.+++++||++|+.+++.+++.+||+|+++...|.+.... +...|+++..++..|+++
T Consensus 97 ~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~~~ 172 (407)
T PRK07179 97 DDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEG----VRAAGAQAHPFRHNDVDH 172 (407)
T ss_pred CchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHH----HHHCCCeEEEecCCCHHH
Confidence 3468899999999999999999999999999999999999999999999888876533 334577887777789999
Q ss_pred HHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc-------cccc--ccCCcEEEECCccc
Q 009172 288 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------QKAL--SLGADLVLHSATKF 358 (541)
Q Consensus 288 Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~-------~~~l--~~gaDivv~S~sK~ 358 (541)
++++++++++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+.. .... ..++|+++.|++|.
T Consensus 173 l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~ 252 (407)
T PRK07179 173 LRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKA 252 (407)
T ss_pred HHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHh
Confidence 99999753478999999999999999999999999999999999999864321 1111 12469999999999
Q ss_pred cCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCCCceEE
Q 009172 359 IGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAHPKVKRV 433 (541)
Q Consensus 359 lgg~g~v~gG~vv~~~~li~~l~~~~~--~~g~~~s~~~a~l~l~~l~---tl~~r~~~~~~na~~la~~L~~~p~v~~V 433 (541)
+++. +|++++++++++.+..... .++++..+..+..+...++ ....+.++..++++++.+.|++. ++. +
T Consensus 253 ~g~~----~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v 326 (407)
T PRK07179 253 FAGR----AGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL-GYN-I 326 (407)
T ss_pred hhcc----CeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC-C
Confidence 9864 6889999888777664332 2455555544433333333 33345667778888888888764 221 1
Q ss_pred eCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCC
Q 009172 434 HYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGI 513 (541)
Q Consensus 434 ~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi 513 (541)
. +.++++++.++. ......+.+.|...++.++ ..+.|.. ..
T Consensus 327 ~------------------~~~~i~~l~~~~-~~~~~~~~~~L~~~GI~~~------~~~~p~~--------------~~ 367 (407)
T PRK07179 327 R------------------SESQIIALETGS-ERNTEVLRDALEERNVFGA------VFCAPAT--------------PK 367 (407)
T ss_pred C------------------CCCCEEEEEeCC-HHHHHHHHHHHHHCCceEe------eecCCCC--------------CC
Confidence 1 135788998753 2344556666655554322 1122221 01
Q ss_pred CCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 514 MDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 514 ~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
..+.||||++...+++.++.+.++|+
T Consensus 368 ~~~~lRis~~~~~t~edi~~~~~~l~ 393 (407)
T PRK07179 368 NRNLIRLSLNADLTASDLDRVLEVCR 393 (407)
T ss_pred CCceEEEEECCCCCHHHHHHHHHHHH
Confidence 25789999998666555555555554
No 66
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.93 E-value=6.9e-24 Score=224.96 Aligned_cols=225 Identities=13% Similarity=0.187 Sum_probs=176.8
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 201 SFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.|.+++...|..+++|+.+|+++|.+.++++++|++++.+++.+++++||+|+++.++|.+.+.. +...|+++.++
T Consensus 54 ~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~----~~~~G~~~~~v 129 (387)
T PRK09331 54 PGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVA----AERAGLNVREV 129 (387)
T ss_pred ccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH----HHHcCCEEEEE
Confidence 55667777889999999999999999889998899999999999999999999999999887643 44568888888
Q ss_pred CC-------CCHHHHHHhccCC------CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-ccccccc
Q 009172 281 DP-------ADMEGLEAALNNN------NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSL 346 (541)
Q Consensus 281 d~-------~dle~Le~ai~~~------~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~ 346 (541)
+. .|+++++++++++ ++++|++++|+|++|.+.|+++|.++|+++|+++++|++++.+. +.+...+
T Consensus 130 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~ 209 (387)
T PRK09331 130 PKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKL 209 (387)
T ss_pred eCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHc
Confidence 65 3789999988631 58999999999999999999999999999999999999998753 3455677
Q ss_pred CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--------hcCCCccHHHHHHHHHhHHH---HHHHHHHHHH
Q 009172 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGGALNPNAAYLIIRGMKT---LHLRVQQQNS 415 (541)
Q Consensus 347 gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~--------~~g~~~s~~~a~l~l~~l~t---l~~r~~~~~~ 415 (541)
|+|+++.|+||++++++ .+|++++++++++.++.... .++.++.+...+.++.+++. ...+.+++.+
T Consensus 210 g~D~~~~s~~K~l~~~~--~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~ 287 (387)
T PRK09331 210 GADFIVGSGHKSMAASA--PSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVK 287 (387)
T ss_pred CCCEEEeeCcccccCCC--CEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998664 37899999988887655322 12333332223323333333 2334566677
Q ss_pred HHHHHHHHHHhCCCce
Q 009172 416 TALRMAEILEAHPKVK 431 (541)
Q Consensus 416 na~~la~~L~~~p~v~ 431 (541)
+++++.+.|.+.+++.
T Consensus 288 ~~~~l~~~L~~l~g~~ 303 (387)
T PRK09331 288 KARWFVDELEKIEGFK 303 (387)
T ss_pred HHHHHHHHHhcCCCEE
Confidence 8888999999887654
No 67
>PLN02651 cysteine desulfurase
Probab=99.93 E-value=2.2e-24 Score=226.78 Aligned_cols=300 Identities=18% Similarity=0.199 Sum_probs=204.5
Q ss_pred CCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHhhcccCCcEE
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~al----l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v 277 (541)
+++......+++++.|++++|++ ..+++++|++++++++..+ .++||+|+++..+|+++...+.. +...|+++
T Consensus 37 ~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~-~~~~g~~v 115 (364)
T PLN02651 37 YGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRH-LQQEGFEV 115 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHH-HHhcCCEE
Confidence 34444566889999999999974 4555666678888776554 57899999999999987666643 34678888
Q ss_pred EEeCC-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEE
Q 009172 278 TVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLV 351 (541)
Q Consensus 278 ~~vd~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDiv 351 (541)
+.++. .|++++++++++ ++++|++++++|+||.+.|+++|.++||++|+++++|++++.+ .+.+..++|+|++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~ 194 (364)
T PLN02651 116 TYLPVKSDGLVDLDELAAAIRP-DTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLM 194 (364)
T ss_pred EEEccCCCCcCCHHHHHHhcCC-CcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEE
Confidence 88764 378999999987 4999999999999999999999999999999999999998875 4566777899999
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhh-------hcCCCccHHHHHHHHHhHHHHHHHH----HHHHHHHHHH
Q 009172 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMKTLHLRV----QQQNSTALRM 420 (541)
Q Consensus 352 v~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~-------~~g~~~s~~~a~l~l~~l~tl~~r~----~~~~~na~~l 420 (541)
+.|.||+++++| .|+++.+++...++..... ...++.+....+.+..+++.+.... ++..+..+++
T Consensus 195 ~~s~hK~~gp~G---~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l 271 (364)
T PLN02651 195 SISGHKIYGPKG---VGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERL 271 (364)
T ss_pred EechhhhCCCCc---eEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999999876665 5777766654443332110 1223444444444444554433222 3344555666
Q ss_pred HHHHHh-CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccc
Q 009172 421 AEILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 421 a~~L~~-~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
.+.|++ .|+++ ++.|.- +. ....++++|.+++- ....+...|.. |+++.|..++. ....
T Consensus 272 ~~~l~~~~~~~~-i~~~~~---~~--------~~~~~i~~~~~~~~--~~~~~~~~L~~--i~v~~g~~c~~----~~~~ 331 (364)
T PLN02651 272 LNGLRAKLGGVR-VNGPRD---PE--------KRYPGTLNLSFAYV--EGESLLMGLKE--VAVSSGSACTS----ASLE 331 (364)
T ss_pred HHHHHhhCCCEE-EECCCC---cc--------cCcCCEEEEEeCCC--CHHHHHHHhCC--EEEEchhhcCC----CCCC
Confidence 666654 45553 333311 00 11356999999752 23456666654 88998865432 1111
Q ss_pred cccCCHHHHHhcCCC----CCeEEEEecCCCHHHHHH
Q 009172 500 YWDLSQSERLKYGIM----DNLVRFSFGVEDFEDLKA 532 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~----~~~IRlSvG~Ed~edli~ 532 (541)
+....+++|+. .+.||+|++..++++.|+
T Consensus 332 ----~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 332 ----PSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred ----cCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 12334556654 479999999998887653
No 68
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=4e-24 Score=226.25 Aligned_cols=280 Identities=14% Similarity=0.162 Sum_probs=194.8
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+++...+|+++||+++|.+ +.|++++|+ +++..++.+++++||+|++++|+|+... ...+..|+++..++.
T Consensus 81 ~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~----~~~~~~g~~~~~v~~ 156 (380)
T PLN03026 81 YVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYV----FDAAVNGAEVIKVPR 156 (380)
T ss_pred ccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEeec
Confidence 4577788899999999999964 556666665 8999999999999999999999997533 334456888877753
Q ss_pred -----CCHHHHHHhc-cCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc-cc---c-ccCCcEE
Q 009172 283 -----ADMEGLEAAL-NNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KA---L-SLGADLV 351 (541)
Q Consensus 283 -----~dle~Le~ai-~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~-~~---l-~~gaDiv 351 (541)
.|++++++++ ++ ++++|++++|+||||.+++.+++.++++.. +++|+||+|...... .. . .....++
T Consensus 157 ~~~~~~d~~~l~~~~~~~-~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv 234 (380)
T PLN03026 157 TPDFSLDVPRIVEAVETH-KPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIV 234 (380)
T ss_pred CCCCCcCHHHHHHHHhcc-CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEE
Confidence 3688999988 44 599999999999999999999999999865 999999998654321 11 1 2345689
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCC
Q 009172 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEILEAHP 428 (541)
Q Consensus 352 v~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l---~tl~~r~~~~~~na~~la~~L~~~p 428 (541)
+.|+||.+|..| ...||+++++++++.+......++ .+.....++...+ +.+....+...+++..+.+.|++++
T Consensus 235 ~~SfSK~~glaG-lRiGy~~~~~~~i~~l~~~~~~~~--~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 311 (380)
T PLN03026 235 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVP 311 (380)
T ss_pred EecchHhhcCcc-ccceeeecCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999998665 457999999999998877654333 3444434444444 2333334445566777888888765
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHH
Q 009172 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
.+. + +|. .|+++++.++.+ ....+|.+.|...++.+..+..
T Consensus 312 ~~~-~-~p~----------------~~~f~~~~~~~~-~~~~~~~~~l~~~gI~v~~~~~-------------------- 352 (380)
T PLN03026 312 FLE-P-YPS----------------DANFILCRVTSG-RDAKKLKEDLAKMGVMVRHYNS-------------------- 352 (380)
T ss_pred CCe-E-CCC----------------CCeEEEEECCCC-CCHHHHHHHHHHCCeEEEECCC--------------------
Confidence 432 2 332 577899998632 1234555555555666654311
Q ss_pred HhcCCCCCeEEEEecCC-CHHHHHHHHH
Q 009172 509 LKYGIMDNLVRFSFGVE-DFEDLKADVL 535 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~E-d~edli~dL~ 535 (541)
.+ .+++||||+|.. +.+.+++.|+
T Consensus 353 --~~-~~~~lRis~~~~~~~~~l~~al~ 377 (380)
T PLN03026 353 --KE-LKGYIRVSVGKPEHTDALMEALK 377 (380)
T ss_pred --CC-CCCEEEEecCCHHHHHHHHHHHH
Confidence 01 246999999953 3344444443
No 69
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.93 E-value=9.1e-24 Score=222.34 Aligned_cols=301 Identities=20% Similarity=0.236 Sum_probs=208.9
Q ss_pred hhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC----
Q 009172 210 PTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~---~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
+..+++++.|++++|.+ +.+++++|++++.+++.+++++||+|+++.++|+++...+....+..|++++.++.
T Consensus 44 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 123 (376)
T TIGR01977 44 REVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEG 123 (376)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCC
Confidence 67889999999999974 34566677899999999999999999999999998776665566667888888764
Q ss_pred -CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc-ccccccCCcEEEECCccccC
Q 009172 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIG 360 (541)
Q Consensus 283 -~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~-~~~l~~gaDivv~S~sK~lg 360 (541)
.|++++++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+.. .+....|+|+++.|++|+++
T Consensus 124 ~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~ 202 (376)
T TIGR01977 124 LISPERIKRAIKT-NTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLL 202 (376)
T ss_pred CcCHHHHHHhcCC-CCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEeccccccc
Confidence 279999999987 599999999999999999999999999999999999999876533 34445789999999999988
Q ss_pred CCCCceEEEEEeChHHHHHHHHH----------------hhhcCCCccHHHHHHHHHhHHHH-----HHHHHHHHHHHHH
Q 009172 361 GHNDVLAGSISGSGKLVTQIRNL----------------HHVLGGALNPNAAYLIIRGMKTL-----HLRVQQQNSTALR 419 (541)
Q Consensus 361 g~g~v~gG~vv~~~~li~~l~~~----------------~~~~g~~~s~~~a~l~l~~l~tl-----~~r~~~~~~na~~ 419 (541)
++.+ .|++++.++..+..+... .+...++.+....+.+...++.+ +...++..+.+++
T Consensus 203 ~p~g-~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~ 281 (376)
T TIGR01977 203 GPQG-TGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEK 281 (376)
T ss_pred CCCC-ceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 6642 345555544322211110 00001122232223333344433 2234556677788
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-ceeecCCCcccceecCccc
Q 009172 420 MAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 420 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~-~iavS~G~~~sl~~~pa~~ 498 (541)
+.+.|.+.+.+. +..|.- + ...+++++|.+++- ....+.+.|... ++.++.|..++...+
T Consensus 282 ~~~~l~~~~~~~-~~~~~~---~---------~~~~~~v~~~~~~~--~~~~~~~~L~~~~gi~v~~g~~~~~~~~---- 342 (376)
T TIGR01977 282 LLNGLREINKVK-IYGPAD---P---------ANRVGVVSFTVEGI--DSEEVADILDEKFDIATRTGLHCAPLAH---- 342 (376)
T ss_pred HHHHHhcCCCeE-EeCCCC---c---------cccCCeEEEEECCC--CHHHHHHHHhccCCEEEEcccccchHHH----
Confidence 888888777653 332210 1 01356899998742 344566666554 777777754332111
Q ss_pred ccccCCHHHHHhcC-CCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 499 SYWDLSQSERLKYG-IMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 499 ~~~~~~~~~~~~~g-i~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
..+| ...+.||+|++..++++.++.+.++|..+
T Consensus 343 ----------~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~~ 376 (376)
T TIGR01977 343 ----------KTIGTFATGTIRLSLGYFNTEEEIEKLLEALSEI 376 (376)
T ss_pred ----------HHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhhC
Confidence 1122 24579999999999999999999998764
No 70
>PLN02721 threonine aldolase
Probab=99.93 E-value=6.3e-24 Score=221.33 Aligned_cols=284 Identities=19% Similarity=0.220 Sum_probs=198.2
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc-CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC---
Q 009172 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~-~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
+.+|...+||++||+++|.+..+++++|++++..++.++++ +||+|++++++|...+... ..+...|+++++++.
T Consensus 37 ~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~ 115 (353)
T PLN02721 37 GYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENG-GISTLGGVHPRTVKNNED 115 (353)
T ss_pred CCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhccc-chhhhcCceeEecCCCcC
Confidence 44677899999999999998889999999888888888777 9999999999986544310 134456888887763
Q ss_pred --CCHHHHHHhccC------CCeeEEEEeCC-CCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCC------ccccc
Q 009172 283 --ADMEGLEAALNN------NNVSLFFTESP-TNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL------NQKAL 344 (541)
Q Consensus 283 --~dle~Le~ai~~------~~tklV~lesp-~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~------~~~~l 344 (541)
.|++++++++++ .++++|+++++ +||+|.++| +++|.++|+++|+++|+|+++.... .....
T Consensus 116 ~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~ 195 (353)
T PLN02721 116 GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRL 195 (353)
T ss_pred CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHH
Confidence 379999999972 15899999885 688999987 6799999999999999999864221 11222
Q ss_pred ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccH--HHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 009172 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP--NAAYLIIRGMKTLHLRVQQQNSTALRMAE 422 (541)
Q Consensus 345 ~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~--~~a~l~l~~l~tl~~r~~~~~~na~~la~ 422 (541)
..++|.++.|+||+++++ +||++++++++++.+.......++.+.. ..++.+..+++....++++..++++.+.+
T Consensus 196 ~~~~d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 272 (353)
T PLN02721 196 VKAADSVSVCLSKGLGAP---VGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAE 272 (353)
T ss_pred hhhCCEEEEecccccCCc---eeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 337899999999999865 3556778889888877665544443322 22333445566655566666777888999
Q ss_pred HHHhCCCceE-EeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCCcccceecCccccc
Q 009172 423 ILEAHPKVKR-VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 500 (541)
Q Consensus 423 ~L~~~p~v~~-V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~ 500 (541)
.|++++++.. +..| .++++++.++.. ......+.+.|...++.+..+
T Consensus 273 ~L~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~-------------- 321 (353)
T PLN02721 273 GLNQIKGLRVNVAAV-----------------ETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPG-------------- 321 (353)
T ss_pred HHHhCCCcEEecCCc-----------------cceEEEEEccCCccccHHHHHHHHHhCCcEEecC--------------
Confidence 9988766532 2111 356889988632 123456666666556554432
Q ss_pred ccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 501 WDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 501 ~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
..+.||++++....++.++.+.++|
T Consensus 322 -------------~~~~lR~~~~~~~~~~~i~~~~~~l 346 (353)
T PLN02721 322 -------------NSSRIRVVTHHQISDSDVQYTLSCF 346 (353)
T ss_pred -------------CCceEEEEecCcCCHHHHHHHHHHH
Confidence 2458999998544444444444444
No 71
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.93 E-value=3.7e-24 Score=226.37 Aligned_cols=312 Identities=17% Similarity=0.171 Sum_probs=202.4
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHhCC--Cc-EEEeCCHHHHHHHHHHHhc-----cC-CCEEEEcCCCCcchHHHHHhhc
Q 009172 200 ASFEYGRYGNPTTVVVEEKMSALEGA--ES-TVIMASGMSASTVMLLALV-----PA-GGHIVTTTDCYRKTRIFIETVL 270 (541)
Q Consensus 200 ~~~~Y~R~~~p~~~~Le~~LA~l~g~--~~-~i~~sSG~~Ai~~al~all-----~~-GD~VIv~~~~y~~~~~~~~~~l 270 (541)
+.+.|++...+..++.++++++..|+ .+ .++++++++++.+++.++. ++ ||+|+++..+|+++...+. .+
T Consensus 32 ~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~-~~ 110 (382)
T TIGR03403 32 SLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCA-FL 110 (382)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHH-HH
Confidence 33444433333344444444444554 24 4555555689999888752 45 4789999999988776553 45
Q ss_pred ccCCcEEEEeCCC-----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-Cccccc
Q 009172 271 PKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKAL 344 (541)
Q Consensus 271 ~~~Gi~v~~vd~~-----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~-~~~~~l 344 (541)
+..|+++++++.+ |++++++++++ ++++|++++|+||||.++|+++|.++|+++|+++++|++++.+ ...+..
T Consensus 111 ~~~G~~v~~v~~~~~g~~d~~~l~~~i~~-~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~ 189 (382)
T TIGR03403 111 ESLGVEVTYLPINEQGTITAEQVREAITE-KTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQ 189 (382)
T ss_pred HHCCCEEEEEecCCCCCCCHHHHHHhccc-CCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCcc
Confidence 6689998888643 78999999987 4899999999999999999999999999999999999998765 345556
Q ss_pred ccCCcEEEECCccccCCCCCceEEEEEeChHHH-HH-HHH---HhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHH
Q 009172 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLV-TQ-IRN---LHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNS 415 (541)
Q Consensus 345 ~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li-~~-l~~---~~~~~g~~~s~~~a~l~l~~l~t----l~~r~~~~~~ 415 (541)
++|+|+++.|+||++|++| .|+++.++.+. .. +.. ......++++....+.+..+++. ++...++..+
T Consensus 190 ~~~~D~~~~s~~K~~gp~G---~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~ 266 (382)
T TIGR03403 190 KAGVDFLSFSAHKFHGPKG---VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRR 266 (382)
T ss_pred ccCCCEEEEcchhhCCCCc---eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 7789999999999988777 45565544321 11 100 00011123333333333333332 2333445556
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecC
Q 009172 416 TALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 416 na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
.++++.+.|.+.+.+. +..+. . ...++++.|.+++- ....++..|...+|.++.|..++..
T Consensus 267 l~~~l~~~L~~~~~~~-~~~~~--~-----------~~~~~~~~~~~~~~--~~~~~~~~L~~~gI~v~~g~~c~~~--- 327 (382)
T TIGR03403 267 LRDRLEDALLELPDVF-VVGDR--E-----------HRVPNTILISIKGV--EGEAMLWDLNKAGIAASTGSACASE--- 327 (382)
T ss_pred HHHHHHHHHhcCCCEE-EECCC--C-----------CCcCCEEEEEeCCC--CHHHHHHhhccCCEEEEchhccCCC---
Confidence 6777777887777663 32221 0 01346788888752 2345556677779999988654311
Q ss_pred cccccccCCHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 496 AIMSYWDLSQSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~----~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
. .-+...+.++|.. .+.||+|++..++++.++.+.++|++
T Consensus 328 -~----~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~ 371 (382)
T TIGR03403 328 -D----LEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK 371 (382)
T ss_pred -C----CCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence 0 0012344555653 47899999998888888888877754
No 72
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.93 E-value=9e-24 Score=224.87 Aligned_cols=269 Identities=13% Similarity=0.107 Sum_probs=185.6
Q ss_pred hhHHHHHHHHHHHhC------C-C-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 210 PTTVVVEEKMSALEG------A-E-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 210 p~~~~Le~~LA~l~g------~-~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+....|+++||++++ . . +.|++++|+ +++.+++.+++++||+|++++|+|+.... .+...|+++..+
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v 144 (399)
T PRK07681 69 SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYET----GIQMAGATSYYM 144 (399)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHH----HHHhcCCEEEEE
Confidence 456678888887763 1 2 456666665 89999999999999999999999988653 345568887777
Q ss_pred CCC-------CHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc----c-c-
Q 009172 281 DPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A-L- 344 (541)
Q Consensus 281 d~~-------dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~----~-l- 344 (541)
+.+ |++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|++||+||+|....... + .
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~ 223 (399)
T PRK07681 145 PLKKENDFLPDLELIPEEIAD-KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLS 223 (399)
T ss_pred ecCCCCCCcCCHHHHHHhccc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhh
Confidence 532 68889888876 5999999999999999998 6688888999999999999987543211 1 1
Q ss_pred ---ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHH
Q 009172 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (541)
Q Consensus 345 ---~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~----tl~~r~~~~~~na 417 (541)
.....|++.|+||.++.+| ...||+++++++++.+...........+......+...++ .+....+...++.
T Consensus 224 ~~~~~~~~i~~~S~SK~~~~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 302 (399)
T PRK07681 224 VPGAKEVGVEINSLSKSYSLAG-SRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERR 302 (399)
T ss_pred CCCCcccEEEEeecccccCCcc-ceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 1124588999999998666 4588999999999988876654444444444444444443 2333344455667
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-CceeecCCCcccceecCc
Q 009172 418 LRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 418 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~-~~iavS~G~~~sl~~~pa 496 (541)
..+.+.|+++ ++ .+..|. .|.++|++++++ ....+|.+.+.. .++.+..|..+..
T Consensus 303 ~~l~~~L~~~-g~-~~~~p~----------------~g~f~~~~l~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~----- 358 (399)
T PRK07681 303 DTLVDGFRTF-GW-NVDKPA----------------GSMFVWAEIPKG-WTSLSFAYALMDRANVVVTPGHAFGP----- 358 (399)
T ss_pred HHHHHHHHHC-CC-cccCCC----------------eeeEEEEECCCC-CCHHHHHHHHHHhCCEEEeCChhhCc-----
Confidence 7788888775 33 222221 467889998743 123445555433 5777766643210
Q ss_pred ccccccCCHHHHHhcCCCCCeEEEEecC
Q 009172 497 IMSYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
-.+++||||++.
T Consensus 359 ----------------~~~~~iRis~~~ 370 (399)
T PRK07681 359 ----------------HGEGFVRIALVQ 370 (399)
T ss_pred ----------------CCCCeEEEEecC
Confidence 124799999994
No 73
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.93 E-value=2.2e-23 Score=220.93 Aligned_cols=284 Identities=18% Similarity=0.163 Sum_probs=196.4
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHH
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~L 288 (541)
.+...+||++||+++|.+++++++||++|+..++.+++++||+|+++++.|.+....+ ... +.....+...|++++
T Consensus 82 ~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~-~~~---~~~~~~~~~~d~~~l 157 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGV-RLC---KAKRYRYANNDMADL 157 (393)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHH-Hhc---CCceEEeCCCCHHHH
Confidence 5678999999999999999999999999999999999999999999999999876544 222 233333456788999
Q ss_pred HHhccC---C--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc-c------cc--ccCCcEEEEC
Q 009172 289 EAALNN---N--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K------AL--SLGADLVLHS 354 (541)
Q Consensus 289 e~ai~~---~--~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~-~------~l--~~gaDivv~S 354 (541)
++++++ . ++++|++++++||+|.+.|+++|.++|++||+++|+|++|+.++.. . .. ..++|+++.|
T Consensus 158 ~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s 237 (393)
T TIGR01822 158 EAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGT 237 (393)
T ss_pred HHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEE
Confidence 988864 1 5899999999999999999999999999999999999998644321 1 11 2257999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCC
Q 009172 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAHPK 429 (541)
Q Consensus 355 ~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~--~~g~~~s~~~a~l~l~~l~tl---~~r~~~~~~na~~la~~L~~~p~ 429 (541)
+||+++|. .+|++++++++++.++.... .++++.++.....+...++.+ ....++..++.+++.+.|++. +
T Consensus 238 ~sK~l~g~---r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 313 (393)
T TIGR01822 238 LGKALGGA---SGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA-G 313 (393)
T ss_pred ChHHhhCC---CcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-C
Confidence 99999864 37999999999888876322 233334444333334444433 233455567777777777763 2
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHH
Q 009172 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 430 v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
+. + .+. .++++.+.+.+ ......|.+.|...++.++ |..+ |.. +
T Consensus 314 ~~-~-~~~----------------~~~~~~i~~~~-~~~~~~l~~~L~~~gI~v~-~~~~-----~~~------~----- 357 (393)
T TIGR01822 314 FD-I-KPA----------------DHPIIPVMLYD-AVLAQRFARRLLEEGIYVT-GFFY-----PVV------P----- 357 (393)
T ss_pred CC-C-CCC----------------CCCEEEEEeCC-HHHHHHHHHHHHHCCeeEe-eeCC-----CCC------C-----
Confidence 21 1 110 23466776653 2345667777655566665 3221 110 0
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 510 KYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
-....||+|++..++++.++.+.++|.
T Consensus 358 ---~~~~~iRis~~~~~t~edi~~~~~~l~ 384 (393)
T TIGR01822 358 ---KGQARIRVQISAAHTEEQLDRAVEAFT 384 (393)
T ss_pred ---CCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 023469999988766555555555554
No 74
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.93 E-value=3.4e-24 Score=226.27 Aligned_cols=301 Identities=17% Similarity=0.161 Sum_probs=203.5
Q ss_pred chhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc---cCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC-
Q 009172 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV---PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~all---~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~- 282 (541)
....+++++.+++++|++ +.+++++|++++.+++..++ ++||+|+++..+|++....+.. ++..|++++.++.
T Consensus 41 ~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~-~~~~G~~v~~v~~~ 119 (379)
T TIGR03402 41 GKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQH-LEKQGYKVTYLPVD 119 (379)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHH-HHHcCCEEEEEccC
Confidence 345778899999999974 45666677899999888764 4678999999999887665543 4457998888863
Q ss_pred ----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEECCcc
Q 009172 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATK 357 (541)
Q Consensus 283 ----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~S~sK 357 (541)
.|++++++++++ ++++|++++++||||.++|+++|.++|+++|+++++|++++.+. +.+....++|+++.|.+|
T Consensus 120 ~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K 198 (379)
T TIGR03402 120 EEGRLDLEELRAAITD-DTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHK 198 (379)
T ss_pred CCCcCCHHHHHHhcCC-CcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHH
Confidence 378999999987 59999999999999999999999999999999999999987653 345556789999999999
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHHh-------hhcCCCccHHHHHHHHHhHHHH----HHHHHHHHHHHHHHHHHHHh
Q 009172 358 FIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGMKTL----HLRVQQQNSTALRMAEILEA 426 (541)
Q Consensus 358 ~lgg~g~v~gG~vv~~~~li~~l~~~~-------~~~g~~~s~~~a~l~l~~l~tl----~~r~~~~~~na~~la~~L~~ 426 (541)
+++++| .|+++.+++.. +.... ....++.+....+.+..+++.+ +...++..+...++.+.|.+
T Consensus 199 ~~gp~G---~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 273 (379)
T TIGR03402 199 LHGPKG---VGALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA 273 (379)
T ss_pred cCCCCc---eEEEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 777666 56776665431 11100 0112233333333233333333 22233444556666666664
Q ss_pred -CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCH
Q 009172 427 -HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 505 (541)
Q Consensus 427 -~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~ 505 (541)
.+.+.- ..+. . ...++++.|.+++. ....+...|+..+|.++.|..++..... +.
T Consensus 274 ~~~~~~~-~~~~--~-----------~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~v~~g~~c~~~~~~--------~~ 329 (379)
T TIGR03402 274 RIPDARL-NGDP--T-----------KRLPNTVNISFEYI--EGEAILLLLDMEGICASSGSACTSGSLE--------PS 329 (379)
T ss_pred hCCCEEE-eCCC--c-----------cCCCCEEEEEecCC--CHHHHHHhhccCCEEEEchhhcCCCCCC--------cC
Confidence 565532 2111 0 01245777777642 2356777787789999988654321110 12
Q ss_pred HHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 506 SERLKYGIM----DNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 506 ~~~~~~gi~----~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+..+.+|.. .+.||+|++..++++.|+.+.++|++
T Consensus 330 ~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~ 368 (379)
T TIGR03402 330 HVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP 368 (379)
T ss_pred HHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 344556653 47899999998887777777777653
No 75
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.9e-23 Score=220.76 Aligned_cols=294 Identities=17% Similarity=0.220 Sum_probs=196.0
Q ss_pred CCCCCch-hHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 204 YGRYGNP-TTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p-~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+..|+.+ ...+||+++|+++|.+ +.+++++|++++..++.+++.+||+|++++|.|.... ..+...|.++..+
T Consensus 59 ~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v 134 (380)
T PRK06225 59 YCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIID----NFASRFGAEVIEV 134 (380)
T ss_pred CCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHHhCceEEee
Confidence 3445555 4688999999999863 5677777779999999999999999999999998643 3345567777766
Q ss_pred CC--------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc----ccc
Q 009172 281 DP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----ALS 345 (541)
Q Consensus 281 d~--------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~----~l~ 345 (541)
+. .|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... ...
T Consensus 135 ~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 213 (380)
T PRK06225 135 PIYSEECNYKLTPELVKENMDE-NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYA 213 (380)
T ss_pred ccccccCCccCCHHHHHhhcCC-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcC
Confidence 42 378999999887 4999999999999999886 7789999999999999999975321111 112
Q ss_pred cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHH-HHHHHHHHH
Q 009172 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQ-QNSTALRMA 421 (541)
Q Consensus 346 ~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---l~~r~~~-~~~na~~la 421 (541)
....+++.|+||++|.+| ...|++++++++++.++..... ....+......+...++. +..++.+ ..++...+.
T Consensus 214 ~~~~i~~~s~SK~~g~~G-~RiG~i~~~~~l~~~~~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~ 291 (380)
T PRK06225 214 PEHTVTSYSFSKIFGMAG-LRIGAVVATPDLIEVVKSIVIN-DLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIK 291 (380)
T ss_pred CCCEEEEeechhhcCCcc-ceeEEEecCHHHHHHHHHHHhc-ccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 235688899999997565 4578999999998888765421 122233333333333322 2222222 234455566
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccc
Q 009172 422 EILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYW 501 (541)
Q Consensus 422 ~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~ 501 (541)
+.|++++.+....+| ..|++++++++........|.+.|...++.+..|..++ +
T Consensus 292 ~~L~~~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~----~------ 345 (380)
T PRK06225 292 EAVDEIEGVFLPVYP----------------SHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTS----K------ 345 (380)
T ss_pred HHHHhCcCCccccCC----------------CCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccC----c------
Confidence 777765543211122 24678899885321234456666655577666553211 0
Q ss_pred cCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHhh
Q 009172 502 DLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALHA 540 (541)
Q Consensus 502 ~~~~~~~~~~gi~~~~IRlSvG~--Ed~edli~dL~~AL~~ 540 (541)
+..++.+|+|++. |+.+.+++.|.++++.
T Consensus 346 ----------~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 346 ----------RFGDRYIRVSFSIPREQVEVFCEEFPDVVET 376 (380)
T ss_pred ----------CCCCceEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 0125799999997 3566677777776654
No 76
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.2e-23 Score=224.68 Aligned_cols=286 Identities=15% Similarity=0.157 Sum_probs=194.6
Q ss_pred CCCchhHHHHHHHHHHHh----C---C--CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCc
Q 009172 206 RYGNPTTVVVEEKMSALE----G---A--ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~----g---~--~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
+|+......|++++|+++ | . ++.|++++|+ +++..++.+++++||+|+++.|.|..... .++..|.
T Consensus 77 ~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~----~~~~~g~ 152 (410)
T PRK06290 77 GYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGT----HTKYYGG 152 (410)
T ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHH----HHHHcCC
Confidence 345566778899999875 3 2 2357777776 89999999999999999999999988653 3455688
Q ss_pred EEEEeCCC-------CHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc-c--
Q 009172 276 TATVIDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-K-- 342 (541)
Q Consensus 276 ~v~~vd~~-------dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~-~-- 342 (541)
++..++.+ |++++++++.+ ++|+|++++|+||||.+++ +++|.++|+++|++||+||+|...... .
T Consensus 153 ~v~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~ 231 (410)
T PRK06290 153 EVYNLPLLEENNFLPDLDSIPKDIKE-KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPL 231 (410)
T ss_pred EEEEEecCCCcCCcCCHHHHHHhhcc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCc
Confidence 87776532 68888888876 5999999999999999999 568888899999999999998754221 1
Q ss_pred c---c--ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHH
Q 009172 343 A---L--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQN 414 (541)
Q Consensus 343 ~---l--~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~---tl~~r~~~~~ 414 (541)
+ + ..+.+|++.|+||.++.+| ...|++++++++++.+...........+.....++...++ .+....++..
T Consensus 232 s~~~~~~~~~~~I~i~SfSK~~g~~G-lRiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~ 310 (410)
T PRK06290 232 SFLSVPGAKEVGVEIHSLSKAYNMTG-WRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYS 310 (410)
T ss_pred ChhcCCCccccEEEEeechhhcCCch-hheEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 1 1 1235699999999997666 4578999999999888876654443333333333333332 2333444556
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH------HHHHHHHHHcCCCc-eeecCCC
Q 009172 415 STALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL------TATIKFIDALKIPY-IAPSFGG 487 (541)
Q Consensus 415 ~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~------~~~~~~l~~L~~~~-iavS~G~ 487 (541)
+++..+.+.|+++ ++. +..|. .|.++|+.++++. ....+|.+.|...+ +.+.
T Consensus 311 ~~~~~l~~~L~~~-g~~-~~~p~----------------g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~--- 369 (410)
T PRK06290 311 RRLDKLVKILNEV-GFK-AEMPG----------------GTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTV--- 369 (410)
T ss_pred HHHHHHHHHHHhC-CCe-ecCCC----------------eeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEE---
Confidence 7777888888875 221 21121 3445677886421 13445555554322 2211
Q ss_pred cccceecCcccccccCCHHHHHhcCCCCCeEEEEec-----CCCHHHHHHHHHHHHhh
Q 009172 488 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG-----VEDFEDLKADVLQALHA 540 (541)
Q Consensus 488 ~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG-----~Ed~edli~dL~~AL~~ 540 (541)
|... .++++||+++ .|+.+.+++.|.++|.+
T Consensus 370 -------p~~~---------------~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 370 -------PWDD---------------AGHFLRFSVTFEAKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred -------CCcc---------------ccCeEEEEEEcccccccchhHHHHHHHHHHhh
Confidence 2100 1268999997 35678888999998875
No 77
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.93 E-value=2.3e-23 Score=216.59 Aligned_cols=286 Identities=20% Similarity=0.192 Sum_probs=204.2
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHH
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~ 287 (541)
..+..+++++.+++++|.++.+++++|++++..++.+++++||+|+++++.|.+.... +...|+++..++..|.++
T Consensus 44 ~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~ 119 (349)
T cd06454 44 TSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDG----IRLSGAKKRIFKHNDMED 119 (349)
T ss_pred CchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHH----HHHcCCceEEecCCCHHH
Confidence 4788899999999999998899999999999988888899999999999999886533 345688888777778888
Q ss_pred HHHhccC----CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc---------ccccccCCcEEEEC
Q 009172 288 LEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---------QKALSLGADLVLHS 354 (541)
Q Consensus 288 Le~ai~~----~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~---------~~~l~~gaDivv~S 354 (541)
+++++++ .++++|++++++||+|.+.|+++|.++|+++|+++|+|++++.+.. ......+.|+++.|
T Consensus 120 le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s 199 (349)
T cd06454 120 LEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGT 199 (349)
T ss_pred HHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEee
Confidence 8888864 3578999999999999999999999999999999999999864321 11234578999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCC
Q 009172 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAHPK 429 (541)
Q Consensus 355 ~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~--~g~~~s~~~a~l~l~~l~tl---~~r~~~~~~na~~la~~L~~~p~ 429 (541)
+||.+++. +|++++++++.+.++..... .++..++.....+...++.+ ..+.++..++++.+.+.|.++ +
T Consensus 200 ~sK~~~~~----gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g 274 (349)
T cd06454 200 LGKAFGAV----GGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL-G 274 (349)
T ss_pred chhhhccc----CCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-C
Confidence 99999864 48888888888877654332 23345555554555555543 344566667777888887764 2
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHH
Q 009172 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 430 v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
+. +..+ +.+.++++.++. .....++.+.|...++.++.++...
T Consensus 275 ~~-~~~~----------------~~~~~~~~~~~~-~~~~~~~~~~L~~~gI~~~~~~~~~------------------- 317 (349)
T cd06454 275 FP-VGGS----------------PSHIIPPLIGDD-PAKAVAFSDALLERGIYVQAIRYPT------------------- 317 (349)
T ss_pred Cc-ccCC----------------CCCcEEEEeCCC-hHHHHHHHHHHHhCCceEEEecCCc-------------------
Confidence 21 1000 012234444432 2344566666655566665432100
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 510 KYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
.....+.||++++...+++.++.+.++|++
T Consensus 318 -~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 347 (349)
T cd06454 318 -VPRGTARLRISLSAAHTKEDIDRLLEALKE 347 (349)
T ss_pred -cCCCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 001247899999987777778888877764
No 78
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.93 E-value=1.5e-23 Score=222.63 Aligned_cols=295 Identities=19% Similarity=0.174 Sum_probs=199.4
Q ss_pred hhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC-
Q 009172 210 PTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~al---l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~- 283 (541)
+..+++++.+++++|++ ..++++++++++..++.++ +++||+|+++++.|.++...+...++..|+++.+++.+
T Consensus 60 ~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~ 139 (397)
T TIGR01976 60 QVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDE 139 (397)
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccc
Confidence 45789999999999974 3444455558877766654 68999999999999987766655667789988887542
Q ss_pred -----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEECCcc
Q 009172 284 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATK 357 (541)
Q Consensus 284 -----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~S~sK 357 (541)
|++++++++++ ++++|++++|+||||.+.|+++|.++|+++|+++++|+++..+. ..+..++++|+++.|+||
T Consensus 140 ~~~~~~~~~l~~~i~~-~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K 218 (397)
T TIGR01976 140 ATGELHPDDLASLLSP-RTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYK 218 (397)
T ss_pred cCCCcCHHHHHHhcCC-CceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechh
Confidence 68999999987 49999999999999999999999999999999999999975432 234456789999999999
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHHhhh----------cCCCccHHHHHHHHHhHHHHH-------------------H
Q 009172 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHV----------LGGALNPNAAYLIIRGMKTLH-------------------L 408 (541)
Q Consensus 358 ~lgg~g~v~gG~vv~~~~li~~l~~~~~~----------~g~~~s~~~a~l~l~~l~tl~-------------------~ 408 (541)
++|+. .|++++++++++.+...... ..++.+....+.+..+++.+. .
T Consensus 219 ~~g~~----~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~ 294 (397)
T TIGR01976 219 FFGPH----MGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQA 294 (397)
T ss_pred hcCCc----eEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHH
Confidence 99642 68888898887766532211 112233222222223333221 1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCc
Q 009172 409 RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 409 r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
..++..+.++++.+.|++.+.++ +..+. . + ...++++.|.+++. ....+.+.|+..++.++.|..
T Consensus 295 ~~~~~~~l~~~l~~~L~~~~~~~-~~~~~-~--~---------~~~~~~~~~~~~~~--~~~~l~~~L~~~gI~v~~~~~ 359 (397)
T TIGR01976 295 IDAYENRLAEYLLVGLSDLPGVT-LYGVA-R--L---------AARVPTVSFTVHGL--PPQRVVRRLADQGIDAWAGHF 359 (397)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EeCCC-C--c---------cCCCceEEEEeCCc--CHHHHHHHHHHCCeEEEeCcc
Confidence 12223345566666666655443 32221 0 0 01356888888642 234566677666777776543
Q ss_pred ccceecCcccccccCCHHHHHhcCCC--CCeEEEEecCCCHHHHHHHHHHHH
Q 009172 489 ESIVDQPAIMSYWDLSQSERLKYGIM--DNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~--~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
+.. ......|++ .+.||+|++..++++.++.|.++|
T Consensus 360 ~~~--------------~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 360 YAV--------------RLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred chH--------------HHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 210 111223443 468999999998888888777654
No 79
>PRK02948 cysteine desulfurase; Provisional
Probab=99.93 E-value=8.8e-24 Score=223.28 Aligned_cols=312 Identities=17% Similarity=0.200 Sum_probs=207.9
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhCC-CcEEEeCCH-HHHHHHHHHHhc----cCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009172 201 SFEYGRYGNPTTVVVEEKMSALEGA-ESTVIMASG-MSASTVMLLALV----PAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~g~-~~~i~~sSG-~~Ai~~al~all----~~GD~VIv~~~~y~~~~~~~~~~l~~~G 274 (541)
.|..++......+++|+.+|+++|. ++.|++++| ++++..++.+++ ++||+|+++..+|+++...+. .++..|
T Consensus 34 ~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~-~~~~~g 112 (381)
T PRK02948 34 LHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQ-SLESQG 112 (381)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHH-HHHhCC
Confidence 3333444455688999999999986 355655555 689888887775 578999999999988766653 456678
Q ss_pred cEEEEeCC-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCC
Q 009172 275 ITATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGA 348 (541)
Q Consensus 275 i~v~~vd~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~-~~~~~l~~ga 348 (541)
+++..++. .|+++|++++++ ++++|++++|+||||.+.|+++|.++|+++|+++++|+++..+ ...+..++++
T Consensus 113 ~~v~~v~~~~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~ 191 (381)
T PRK02948 113 YTVTEIPVDKSGLIRLVDLERAITP-DTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGI 191 (381)
T ss_pred CEEEEEeeCCCCCCCHHHHHHhcCC-CCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCCC
Confidence 88887753 378999999987 4899999999999999999999999999999999999886543 2344456789
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHH-HHHHHH----HhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHHHH
Q 009172 349 DLVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRN----LHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALR 419 (541)
Q Consensus 349 Divv~S~sK~lgg~g~v~gG~vv~~~~l-i~~l~~----~~~~~g~~~s~~~a~l~l~~l~----tl~~r~~~~~~na~~ 419 (541)
|+++.|+||++|++| .|+++.++++ +..+.. ......++.+......+...++ .++...++..+++++
T Consensus 192 d~~~~s~~K~~gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 268 (381)
T PRK02948 192 DSLSVSAHKIYGPKG---VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSY 268 (381)
T ss_pred CEEEecHHhcCCCCc---EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998776 5777666553 111110 0011123334333333333333 344455666677788
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccc
Q 009172 420 MAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 420 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
+.+.|++.+. . +...+ .+.+ ....++.|.+++- ...++...|...+|.++.|..++...++
T Consensus 269 l~~~L~~~~~-~-v~~~~---~~~~--------~~~~i~~~~~~~~--~~~~~~~~l~~~gI~v~~g~~c~~~~~~---- 329 (381)
T PRK02948 269 FLEQIQTLPL-P-IEVEG---HSTS--------CLPHIIGVTIKGI--EGQYTMLECNRRGIAISTGSACQVGKQE---- 329 (381)
T ss_pred HHHHHhcCCC-C-EEEeC---CCcc--------CcCCEEEEEeCCC--CHHHHHHhcccCCEEEEchHhcCCCCCC----
Confidence 8888877632 1 22111 0110 1345788888741 2345556677778888887643321111
Q ss_pred cccCCHHHHHhcCC----CCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 500 YWDLSQSERLKYGI----MDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 500 ~~~~~~~~~~~~gi----~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+.....++|. ..+.||+|+|..++++.++.+.++|.+
T Consensus 330 ----p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~ 370 (381)
T PRK02948 330 ----PSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALET 370 (381)
T ss_pred ----CCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 1123334443 247899999988887777777777753
No 80
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.93 E-value=1.4e-24 Score=232.93 Aligned_cols=212 Identities=23% Similarity=0.303 Sum_probs=178.9
Q ss_pred hhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCC---CcchHHHHHhhcccCCcEEEEeCC---C
Q 009172 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC---YRKTRIFIETVLPKMGITATVIDP---A 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~---y~~~~~~~~~~l~~~Gi~v~~vd~---~ 283 (541)
...+.+|+.+++++|++++++++||++|+.+++.+ +.+||+||+++.. |++++.+. ..++..|+++++++. .
T Consensus 122 ~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~e~v~~ggs~~i~-~~~~~~G~~~~~v~~~~~~ 199 (454)
T TIGR00474 122 SRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNT-LAKGKEVIVSRGELVEIGGSFRIP-DVMEQSGAKLVEVGTTNRT 199 (454)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHH-hCCcCEEEECCChhhhhcchhhHH-HHHHHcCCEEEEeCCCCCC
Confidence 45789999999999999999999999999888854 6899999999877 55655553 456778999999976 5
Q ss_pred CHHHHHHhccCCCeeEEEEeCCCCCC--C--cccCHHHHHHHHHhCCCEEEEEcCCC------------CCCcccccccC
Q 009172 284 DMEGLEAALNNNNVSLFFTESPTNPF--L--RCVDVKLVSDLCHKKGAIVCIDGTFA------------TPLNQKALSLG 347 (541)
Q Consensus 284 dle~Le~ai~~~~tklV~lesp~NPt--G--~v~di~~Ia~la~~~gillvvDea~a------------~~~~~~~l~~g 347 (541)
+++++++++++ +|++|++++++|++ | .+.|+++|+++||++|+++++|++.+ .+..+++.+.|
T Consensus 200 ~l~dle~aI~~-~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~G 278 (454)
T TIGR00474 200 HLKDYEDAITE-NTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAG 278 (454)
T ss_pred CHHHHHHhcCc-CCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcC
Confidence 78999999988 49999999999995 5 58999999999999999999999732 22335677899
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHH----------------HHhhhcCCCccHHHHHHHHHhHHHHHHHHH
Q 009172 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR----------------NLHHVLGGALNPNAAYLIIRGMKTLHLRVQ 411 (541)
Q Consensus 348 aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~----------------~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~ 411 (541)
+|++++|++|+++|+. +|+++++++++++++ ......|..+++..+|..+++++++..|++
T Consensus 279 aDiv~fSg~K~LgGp~---~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~ 355 (454)
T TIGR00474 279 VDLVTFSGDKLLGGPQ---AGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPE 355 (454)
T ss_pred CCEEEecCccccCCCe---EEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHH
Confidence 9999999999999883 899999988875532 122345666788999999999999999999
Q ss_pred HHHHHHHHHHHHHHhC
Q 009172 412 QQNSTALRMAEILEAH 427 (541)
Q Consensus 412 ~~~~na~~la~~L~~~ 427 (541)
++.+++++++++|++.
T Consensus 356 ~~~~~A~~la~~L~~~ 371 (454)
T TIGR00474 356 ELRARAERLAKRLKAA 371 (454)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999874
No 81
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1e-23 Score=220.81 Aligned_cols=281 Identities=18% Similarity=0.266 Sum_probs=195.4
Q ss_pred CCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~--~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+.+|+++...+|++.||+++|.. +.|++++|+ +++.+++.+++++||+|+++.|+|.... ..++..|++++.+
T Consensus 57 ~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~i 132 (356)
T PRK04870 57 LNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYR----MSAKLAGLEFVGV 132 (356)
T ss_pred cccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHH----HHHHHcCCEEEEe
Confidence 34556667789999999999863 367777776 8889999999999999999999998644 3455678888887
Q ss_pred CC-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCccc----ccccCCcEE
Q 009172 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK----ALSLGADLV 351 (541)
Q Consensus 281 d~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~----~l~~gaDiv 351 (541)
+. .|+++++++++.+++++|++++|+||||.+++.+++.++++..++++|+|++|....... .......++
T Consensus 133 ~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~ 212 (356)
T PRK04870 133 PLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLV 212 (356)
T ss_pred cCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEE
Confidence 53 368999999865469999999999999999999988888887789999999986432211 112234589
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCC
Q 009172 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEILEAHP 428 (541)
Q Consensus 352 v~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l---~tl~~r~~~~~~na~~la~~L~~~p 428 (541)
+.|+|| ++.+| ...|+++++++++++++.....+ ..+....+++...+ +.+....++..++++.+.+.|++.+
T Consensus 213 ~~S~SK-~~~~G-lRiG~~i~~~~~i~~~~~~~~~~--~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 288 (356)
T PRK04870 213 MRTVSK-LGLAG-LRLGYLAGHPAWIAELDKVRPPY--NVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALP 288 (356)
T ss_pred Eecchh-hhhHH-HhhhhhhCCHHHHHHHHHccCCC--cCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999 66555 45789999999998887655322 23333333333333 3444455666677888888888776
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHH
Q 009172 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
++. + +|. .|+++++.++ + ...+.+.|+..++.+..|..+.
T Consensus 289 ~~~-~-~~~----------------~~~~~~~~~~-~---~~~~~~~l~~~gI~v~~~~~f~------------------ 328 (356)
T PRK04870 289 GVT-V-FPS----------------AANFILVRVP-D---AAAVFDGLKTRGVLVKNLSGMH------------------ 328 (356)
T ss_pred CcE-E-CCC----------------CCeEEEEECC-C---HHHHHHHHHHCCEEEEECCCCC------------------
Confidence 652 2 221 4678999986 2 2345555655677766553221
Q ss_pred HhcCCCCCeEEEEecCC-CHHHHHHHHH
Q 009172 509 LKYGIMDNLVRFSFGVE-DFEDLKADVL 535 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~E-d~edli~dL~ 535 (541)
+..+++||||++.. +.+.+++.|.
T Consensus 329 ---~~~~~~iRis~~~~~~~~~l~~al~ 353 (356)
T PRK04870 329 ---PLLANCLRVTVGTPEENAQFLAALK 353 (356)
T ss_pred ---CCCCCeEEEeCCCHHHHHHHHHHHH
Confidence 01257999999953 3344444443
No 82
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.4e-23 Score=220.78 Aligned_cols=285 Identities=19% Similarity=0.240 Sum_probs=197.1
Q ss_pred CCCCCchhHHHHHHHHHHHhCCC-cEEEeCCH-HHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASG-MSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG-~~Ai~~al~all~~G-D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
..+|++|...+|+++||+++|.+ +.|++++| ++++.+++.+++.+| |+|++++|.|.... ...+..|.++..+
T Consensus 53 ~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~----~~~~~~g~~~~~v 128 (364)
T PRK04781 53 TRRYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA----VCARLQNAPLVEV 128 (364)
T ss_pred hccCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEE
Confidence 56788888899999999999863 35656666 599999999999999 79999999887543 2334567887776
Q ss_pred CC--------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEEcCCCCCCccc-c---c-c
Q 009172 281 DP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK-A---L-S 345 (541)
Q Consensus 281 d~--------~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~--~gillvvDea~a~~~~~~-~---l-~ 345 (541)
+. .|++++++.+...++++|++++|+||||.+++.+++.++++. ++++||+||+|....... . . .
T Consensus 129 ~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~ 208 (364)
T PRK04781 129 PLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLAR 208 (364)
T ss_pred ecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhh
Confidence 53 156777554432359999999999999999998888887764 478999999987543211 1 1 1
Q ss_pred cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH-----HHHHHHHHHHHHHHHHH
Q 009172 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRM 420 (541)
Q Consensus 346 ~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l-----~tl~~r~~~~~~na~~l 420 (541)
...-+++.|+||.+|-+| +..||+++++++++.+++....++. +.....++...+ ..+..++++..++++.+
T Consensus 209 ~~~vi~~~SfSK~~gl~G-lRvGy~v~~~~l~~~l~~~~~~~~~--~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l 285 (364)
T PRK04781 209 YDNLAVLRTLSKAHALAA-ARIGSLIANAELIAVLRRCQAPYPV--PTPCAALAEQALSAPALAVTARRVAEVRAERERL 285 (364)
T ss_pred CCCEEEEecChhhccccc-ceeeeeeCCHHHHHHHHhccCCCCC--CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 234589999999998555 4579999999999998877654433 333222333333 23344555666778888
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCccccc
Q 009172 421 AEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 500 (541)
Q Consensus 421 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~ 500 (541)
.+.|++++.+..+ +|. .|++++++++. ..++.+.+...++.+..|..+
T Consensus 286 ~~~L~~~~~~~~~-~p~----------------~g~f~~~~~~~----~~~~~~~l~~~gI~v~~~~~~----------- 333 (364)
T PRK04781 286 HAALAQLPGVRRV-YPS----------------QGNFLLVRFDD----AEAAFQALLAAGVVVRDQRAA----------- 333 (364)
T ss_pred HHHHHhCCCCCeE-CCC----------------CCcEEEEEcCC----HHHHHHHHHHCCeEEeeCCCC-----------
Confidence 8999877654333 332 57889999863 234555555567766654321
Q ss_pred ccCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHH
Q 009172 501 WDLSQSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQAL 538 (541)
Q Consensus 501 ~~~~~~~~~~~gi~~~~IRlSvG~E-d~edli~dL~~AL 538 (541)
.+ .++++||++|.. +.+.+++.|++..
T Consensus 334 ----------~~-~~~~~Ris~~~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 334 ----------PR-LSDALRITLGTPEQNDRVLAALQRTQ 361 (364)
T ss_pred ----------CC-CCCeEEEeCCCHHHHHHHHHHHHHHH
Confidence 01 257899999974 4466666666544
No 83
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=9.2e-24 Score=219.41 Aligned_cols=279 Identities=18% Similarity=0.208 Sum_probs=185.3
Q ss_pred CCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
+.||++|...+|+++||+++|.. ..|++++|+ +++..++. ++++|+ |++.+|+|.... ..++..|+++..++
T Consensus 34 ~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~----~~~~~~G~~v~~vp 107 (332)
T PRK06425 34 ISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYK----GYAFTHGIRISALP 107 (332)
T ss_pred cccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHH----HHHHHcCCeEEEEe
Confidence 67899999999999999999973 456666666 89988886 567765 666689998755 34556688888776
Q ss_pred CC----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEEcCCCCCCccc--c-c----ccC
Q 009172 282 PA----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQK--A-L----SLG 347 (541)
Q Consensus 282 ~~----dle~Le~ai~~~~tklV~lesp~NPtG~v~di---~~Ia~la~~~gillvvDea~a~~~~~~--~-l----~~g 347 (541)
.+ |.+.++ ..++|+|++++||||||.+++. ++|.++|+++|+++|+||+|....... + . ..+
T Consensus 108 ~~~~~~~~~~l~----~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~ 183 (332)
T PRK06425 108 FNLINNNPEILN----NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYG 183 (332)
T ss_pred CCcccCcHHHHh----hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCC
Confidence 43 333332 2258999999999999999984 567777889999999999987653211 1 1 123
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHH-hHHHH-HHHHHHHHHHHHHHHHHHH
Q 009172 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR-GMKTL-HLRVQQQNSTALRMAEILE 425 (541)
Q Consensus 348 aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~-~l~tl-~~r~~~~~~na~~la~~L~ 425 (541)
..+++.|+||.++-+| +..||+++++++++.+......+. .+......+.. ..+.+ ....+...++++.+.+.|+
T Consensus 184 ~vi~~~SfSK~~~l~G-lRiGy~v~~~~li~~l~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 260 (332)
T PRK06425 184 NVIIGRSLTKILGIPS-LRIGYIATDDYNMKISRKITEPWS--VCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLE 260 (332)
T ss_pred CEEEEeecHHhcCCch-hhheeeecCHHHHHHHHHcCCCCc--cCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4588999999999555 357999999999988887544332 22222222111 11222 2234445566777888887
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCH
Q 009172 426 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 505 (541)
Q Consensus 426 ~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~ 505 (541)
++ ++. +..|. .|+++++.++. ..+|.+.|...++.+..|..+.
T Consensus 261 ~~-g~~-~~~~~----------------~g~f~~~~~~~----~~~~~~~l~~~gi~v~~~~~f~--------------- 303 (332)
T PRK06425 261 AM-GFR-AAGDP----------------SANFITFMIPD----AHDFYSYLLKNGILVRLLDDYE--------------- 303 (332)
T ss_pred HC-CCE-ECCCC----------------CceEEEEEcCC----HHHHHHHHHHCCeEEEECCCCC---------------
Confidence 75 232 22121 46789998862 2345555544577666554321
Q ss_pred HHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHH
Q 009172 506 SERLKYGIMDNLVRFSFGVE-DFEDLKADVLQAL 538 (541)
Q Consensus 506 ~~~~~~gi~~~~IRlSvG~E-d~edli~dL~~AL 538 (541)
+..+++||||+|.. +.+.+++.|++.|
T Consensus 304 ------~~~~~~iRis~~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 304 ------CLGEQYIRIAIRRRSFNIKLVNALRNFL 331 (332)
T ss_pred ------CCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 11257999999974 5566666666554
No 84
>PRK08960 hypothetical protein; Provisional
Probab=99.93 E-value=5.2e-23 Score=218.12 Aligned_cols=284 Identities=15% Similarity=0.122 Sum_probs=188.3
Q ss_pred chhHHHHHHHHHHHhC------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 209 NPTTVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g------~--~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.+...+||+.+|++++ . ++.++++++++++..++.+++++||+|++++|+|......+. ..|.++..+
T Consensus 68 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~----~~g~~~~~v 143 (387)
T PRK08960 68 ARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLR----LVEGAAQLV 143 (387)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hcCCeEEEE
Confidence 3456788888888863 2 345555555699999999999999999999999998765443 345555554
Q ss_pred CC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHH---HHHHHHHhCCCEEEEEcCCCCCCcc----ccccc
Q 009172 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQ----KALSL 346 (541)
Q Consensus 281 d~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~---~Ia~la~~~gillvvDea~a~~~~~----~~l~~ 346 (541)
+. .|++++++++++ ++++|++++|+||||.+++.+ +|+++|+++|+++|+||+|...... .....
T Consensus 144 ~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~ 222 (387)
T PRK08960 144 PVGPDSRYQLTPALVERHWNA-DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEV 222 (387)
T ss_pred ecCcccCCCCCHHHHHHHhCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhc
Confidence 32 368899998887 488999999999999999854 6777789999999999998653221 11122
Q ss_pred -CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHHHHHHHHHHHH
Q 009172 347 -GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRM 420 (541)
Q Consensus 347 -gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~-----tl~~r~~~~~~na~~l 420 (541)
...+++.|+||.+|.+| ...|++++++++++.+...........+.....++...++ .+....+...++++.+
T Consensus 223 ~~~vi~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l 301 (387)
T PRK08960 223 DDDAFVLNSFSKYFGMTG-WRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFL 301 (387)
T ss_pred cCCEEEEeecccccCCcc-cEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHH
Confidence 23478999999998666 4589999999999888876655544445444433333332 2333344455667778
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccceecCcccc
Q 009172 421 AEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 421 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
.+.|++++ +..+.+| ..|.++|++++........|.+.+ +..++.+..|..+..
T Consensus 302 ~~~L~~~~-~~~~~~p----------------~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------- 356 (387)
T PRK08960 302 LPALRELG-FGIAVEP----------------QGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGR-------- 356 (387)
T ss_pred HHHHHhcC-CcCCcCC----------------CeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCC--------
Confidence 88888753 2111122 146678998863111234555543 345777776644321
Q ss_pred cccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHH
Q 009172 500 YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQ 536 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~ 536 (541)
+..++++||+++. +.+.+.+.+++
T Consensus 357 ------------~~~~~~iRi~~~~-~~~~l~~al~~ 380 (387)
T PRK08960 357 ------------HQAGQHVRFAYTQ-SLPRLQEAVER 380 (387)
T ss_pred ------------CCCCCeEEEEecC-CHHHHHHHHHH
Confidence 0124699999997 45555554443
No 85
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.93 E-value=4.6e-23 Score=218.04 Aligned_cols=284 Identities=17% Similarity=0.191 Sum_probs=189.9
Q ss_pred CCCCCchh-HHHHHHHHHHHh----CC----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009172 204 YGRYGNPT-TVVVEEKMSALE----GA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 204 Y~R~~~p~-~~~Le~~LA~l~----g~----~~~i~~sSG-~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~ 273 (541)
+.+|+.+. ..+||+.+|+++ |. ++.+++++| ++++..++..++++||+|++++|+|+.... .....
T Consensus 60 ~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~----~~~~~ 135 (383)
T TIGR03540 60 NHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRI----GTLFA 135 (383)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHH----HHHhc
Confidence 34555543 567888888875 32 234666565 599999999999999999999999988653 34456
Q ss_pred CcEEEEeCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc--
Q 009172 274 GITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (541)
Q Consensus 274 Gi~v~~vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~-- 341 (541)
|.++..++. .|++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 136 G~~v~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~ 214 (383)
T TIGR03540 136 GGEPYEMPLKEENGFLPDFDAIPEDIAK-KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGY 214 (383)
T ss_pred CCEEEEEecCcccCCccCHHHHHhhccc-cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCC
Confidence 777776643 167889888876 5999999999999999999 678889999999999999998643211
Q ss_pred ---c--ccc--cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHH
Q 009172 342 ---K--ALS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRV 410 (541)
Q Consensus 342 ---~--~l~--~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~----tl~~r~ 410 (541)
. .+. ....+++.|+||.+|.+| +..|++++++++++++.......+...+......+...++ .+....
T Consensus 215 ~~~~~~~~~~~~~~~i~~~SfSK~~g~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 293 (383)
T TIGR03540 215 KAPSFLEVDGAKDVGIEFHSLSKTYNMTG-WRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIR 293 (383)
T ss_pred CCcCcccCCCcccCEEEEEecccccCCcc-ceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHH
Confidence 1 111 124588899999998665 4578999999999888776554443333333333333332 233344
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcc
Q 009172 411 QQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCE 489 (541)
Q Consensus 411 ~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L-~~~~iavS~G~~~ 489 (541)
+...+++..+.+.|+++ ++. +..|. .|.++|+.++.+ ....+|.+.+ +..++.+..|..+
T Consensus 294 ~~~~~~~~~~~~~L~~~-~~~-~~~~~----------------~~~~~~~~l~~~-~~~~~~~~~ll~~~gi~v~~g~~f 354 (383)
T TIGR03540 294 KIYQRRRDLLLEALKKI-GID-VEKPK----------------ATFYVWVPVPEG-YTSAEFAARLLEETGVVVTPGVGF 354 (383)
T ss_pred HHHHHHHHHHHHHHHhC-CCE-ecCCC----------------cceEEEEECCCC-CCHHHHHHHHHHHCCEEEecchhh
Confidence 55567778888888876 332 22221 345689998743 2344566554 3456777666432
Q ss_pred cceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009172 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL 534 (541)
.. -.+++||||++.. .+++.+.|
T Consensus 355 ~~---------------------~~~~~~Ris~~~~-~~~l~~~l 377 (383)
T TIGR03540 355 GE---------------------YGEGYIRISLTVP-DERLEEAV 377 (383)
T ss_pred Cc---------------------cCCCeEEEEecCC-HHHHHHHH
Confidence 10 0247899999953 34443333
No 86
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.93 E-value=1.7e-23 Score=225.01 Aligned_cols=286 Identities=16% Similarity=0.170 Sum_probs=195.6
Q ss_pred CCCchh-HHHHHHHHHHHhCC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEE
Q 009172 206 RYGNPT-TVVVEEKMSALEGA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 206 R~~~p~-~~~Le~~LA~l~g~----~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
+|+.+. ..+|++.++++++. ++.|++++|+ +++.+++.++++|||.|++++|+|..... .++..|+++..
T Consensus 116 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~----~~~~~g~~~~~ 191 (431)
T PRK15481 116 LYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSIN----MLRYAGFSASP 191 (431)
T ss_pred hcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH----HHHHcCCeEEe
Confidence 344443 46788889888752 3355555554 99999999999999999999999988653 44556777777
Q ss_pred eCC----CCHHHHHHhccCCCeeEEEEe-CCCCCCCcccCHH---HHHHHHHhC-CCEEEEEcCCCCCCc---cccc--c
Q 009172 280 IDP----ADMEGLEAALNNNNVSLFFTE-SPTNPFLRCVDVK---LVSDLCHKK-GAIVCIDGTFATPLN---QKAL--S 345 (541)
Q Consensus 280 vd~----~dle~Le~ai~~~~tklV~le-sp~NPtG~v~di~---~Ia~la~~~-gillvvDea~a~~~~---~~~l--~ 345 (541)
++. .|++++++++++ ++|+++++ +||||||.+++.+ +|.++|+++ +++||+||+|..... ..++ .
T Consensus 192 v~~~~~g~~~~~l~~~~~~-~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 270 (431)
T PRK15481 192 VSVDAEGMQPEKLERALAQ-GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQT 270 (431)
T ss_pred eccCCCCCCHHHHHHHHhc-CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCC
Confidence 753 368999999876 58998887 9999999999976 999999999 999999999865321 1111 1
Q ss_pred cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH------HHHHHHHHHHHHHH
Q 009172 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTALR 419 (541)
Q Consensus 346 ~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t------l~~r~~~~~~na~~ 419 (541)
....+++.|+||.++ +| ...||+++++++++.+...........+.....++...++. +....+...++.+.
T Consensus 271 ~~~vi~~~SfSK~~~-~G-lRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~ 348 (431)
T PRK15481 271 TQRWALIRSVSKALG-PD-LRLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQK 348 (431)
T ss_pred CCCEEEEeeeccccC-CC-ceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 234589999999999 55 46889999999998887655443334455555554444432 23334445566777
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccc
Q 009172 420 MAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 420 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
+.+.|+++ .+. +..| ..|.++|+.++.+ ...+.+.|...++.+..|..+.. +
T Consensus 349 ~~~~L~~~-~~~-~~~p----------------~gg~f~~~~l~~~---~~~~~~~l~~~gV~v~pg~~f~~---~---- 400 (431)
T PRK15481 349 LARALQQY-GIA-IPSP----------------GDGLNLWLPLDTD---SQATALTLAKSGWLVREGEAFGV---S---- 400 (431)
T ss_pred HHHHHHHc-CCc-cccC----------------CCeEEEEEECCCC---HHHHHHHHHHCCcEEecCCcccc---C----
Confidence 77888775 221 1122 2578899999743 23455555556777776654321 0
Q ss_pred cccCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHHHHHh
Q 009172 500 YWDLSQSERLKYGIMDNLVRFSFGVED---FEDLKADVLQALH 539 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~~~~IRlSvG~Ed---~edli~dL~~AL~ 539 (541)
-..++||||++..+ .++.++.|.+++.
T Consensus 401 -------------~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 401 -------------APSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred -------------CCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 01368999999643 4455555655553
No 87
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.93 E-value=6.5e-23 Score=217.47 Aligned_cols=284 Identities=17% Similarity=0.176 Sum_probs=196.0
Q ss_pred hhHHHHHHHHHHHh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 210 PTTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g~----~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
.....||+.||+++ |. ++.++++++++|+..++.+++++||+|++++|+|..... .++..|+++..++
T Consensus 68 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~~~ 143 (393)
T PRK05764 68 AGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPE----MVKLAGGVPVFVP 143 (393)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHH----HHHHcCCEEEEEe
Confidence 34678899999886 32 345666666799999999999999999999999987543 3455688887776
Q ss_pred CC-------CHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc---------
Q 009172 282 PA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK--------- 342 (541)
Q Consensus 282 ~~-------dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~--------- 342 (541)
.+ |++++++++++ ++++|++++|+||||.+++ +++|.++|++||+++|+|++|.......
T Consensus 144 ~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 222 (393)
T PRK05764 144 TGEENGFKLTVEQLEAAITP-KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASL 222 (393)
T ss_pred cCcccCCcCCHHHHHHhhCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHc
Confidence 42 57899999876 5899999999999999986 7788999999999999999986543211
Q ss_pred -ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHH
Q 009172 343 -ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (541)
Q Consensus 343 -~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~----tl~~r~~~~~~na 417 (541)
+...+.++++.|+||.++.+|. ..|++++++++++.++......+...++...+.+.+.++ .+....++..+++
T Consensus 223 ~~~~~~~~i~~~s~SK~~~~~G~-RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 301 (393)
T PRK05764 223 SPELRDRTITVNGFSKAYAMTGW-RLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERR 301 (393)
T ss_pred CCCCcCCEEEEecCcccccCccc-eeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 1123467999999999986663 578999999999988876655555566666665555553 2233344455667
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHH----HHHHHHHc-CCCceeecCCCcccce
Q 009172 418 LRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA----TIKFIDAL-KIPYIAPSFGGCESIV 492 (541)
Q Consensus 418 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~----~~~~l~~L-~~~~iavS~G~~~sl~ 492 (541)
..+.+.|++++.+. +..| ..|.++|+.+++.... ..++.+.+ +..++.+..|..+.
T Consensus 302 ~~l~~~L~~~~g~~-~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~-- 362 (393)
T PRK05764 302 DLMVDGLNEIPGLE-CPKP----------------EGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFG-- 362 (393)
T ss_pred HHHHHHHhhCCCCc-ccCC----------------CcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccC--
Confidence 77888888775542 2111 1345678887642111 24454443 34577766654321
Q ss_pred ecCcccccccCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009172 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 539 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~--Ed~edli~dL~~AL~ 539 (541)
. +++||||++. ++.++.++.|.+++.
T Consensus 363 --------------------~-~~~vRis~~~~~~~~~~~i~~l~~~~~ 390 (393)
T PRK05764 363 --------------------A-PGYVRLSYATSLEDLEEGLERIERFLE 390 (393)
T ss_pred --------------------C-CCEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1 5799999986 234455555555554
No 88
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.92 E-value=9.5e-23 Score=215.17 Aligned_cols=275 Identities=17% Similarity=0.216 Sum_probs=184.4
Q ss_pred hHHHHHHHHHHH----hC--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 211 TTVVVEEKMSAL----EG--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 211 ~~~~Le~~LA~l----~g--~--~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...+|++.++++ +| . ++.+++++|++++.+++..++++||+|++++|+|..... .++..|+++..++.
T Consensus 62 G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~v~~ 137 (382)
T PRK06108 62 GIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVA----APKILGARVVCVPL 137 (382)
T ss_pred CCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHH----HHHHCCCEEEEeeC
Confidence 345666666665 36 2 345556666799999999999999999999999987553 34556888777653
Q ss_pred --------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc---c-c--c-
Q 009172 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---K-A--L- 344 (541)
Q Consensus 283 --------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~---~-~--l- 344 (541)
.|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... . + .
T Consensus 138 ~~~~~~~~~d~~~l~~~~~~-~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 216 (382)
T PRK06108 138 DFGGGGWTLDLDRLLAAITP-RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLD 216 (382)
T ss_pred CCCCCCccCCHHHHHHhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhh
Confidence 368899998876 5999999999999999986 568888999999999999997654321 0 0 1
Q ss_pred --c-cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHH
Q 009172 345 --S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (541)
Q Consensus 345 --~-~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~----tl~~r~~~~~~na 417 (541)
. ....+++.|+||.++.+| ...|++++++++++.+...........+.....++...++ .+....++..++.
T Consensus 217 ~~~~~~~~i~~~S~SK~~g~~G-~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 295 (382)
T PRK06108 217 IAEPDDRIIFVNSFSKNWAMTG-WRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSR 295 (382)
T ss_pred cCCCcCCEEEEeechhhccCcc-cceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 1 134588999999997655 4579999999999888766543333344444443333333 2334445555667
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccceecCc
Q 009172 418 LRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 418 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa 496 (541)
+.+.+.|++++.+. +..| ..|.++++.+++. .....|.+.| +..++.+..|..+. +
T Consensus 296 ~~l~~~L~~~~~~~-~~~p----------------~~g~~~~~~l~~~-~~~~~~~~~ll~~~gV~v~pg~~f~----~- 352 (382)
T PRK06108 296 DHLVDALRALPGVE-VAKP----------------DGAMYAFFRIPGV-TDSLALAKRLVDEAGLGLAPGTAFG----P- 352 (382)
T ss_pred HHHHHHHHhCCCCc-ccCC----------------CeeEEEEEeCCCC-CCHHHHHHHHHHhCCEEEeCchhhC----C-
Confidence 77888887765432 1111 1355678888642 1234455554 34566666654321 0
Q ss_pred ccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHH
Q 009172 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLK 531 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli 531 (541)
..+++||||++. +.+++.
T Consensus 353 ----------------~~~~~~Ris~~~-~~~~l~ 370 (382)
T PRK06108 353 ----------------GGEGFLRWCFAR-DPARLD 370 (382)
T ss_pred ----------------CCCCEEEEEecC-CHHHHH
Confidence 125799999998 444433
No 89
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=6.9e-24 Score=222.05 Aligned_cols=280 Identities=17% Similarity=0.225 Sum_probs=193.8
Q ss_pred CCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~G-D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.+||+++...+|++++++++|.+ +.|++++|+ +++.+++.+++++| |+|+++.|+|.... ..++..|+++..+
T Consensus 51 ~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~----~~~~~~G~~~~~v 126 (351)
T PRK01688 51 LNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS----VSAETIGVEIRTV 126 (351)
T ss_pred cccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH----HHHHHcCCEEEEe
Confidence 67899999999999999999973 456666665 99999999999997 99999999997643 3455668888777
Q ss_pred CC-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEEcCCCCCCccc-c----cccCC
Q 009172 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK-A----LSLGA 348 (541)
Q Consensus 281 d~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~--~gillvvDea~a~~~~~~-~----l~~ga 348 (541)
+. .|++++++++ + ++++|++++||||||.+.+.+++.++++. .+++||+||+|....... . ...+.
T Consensus 127 ~~~~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n 204 (351)
T PRK01688 127 PTLDNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPH 204 (351)
T ss_pred ecCCCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCC
Confidence 53 2688998887 3 48999999999999999998877777653 268999999987654221 1 12334
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHH
Q 009172 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAEI 423 (541)
Q Consensus 349 Divv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l-----~tl~~r~~~~~~na~~la~~ 423 (541)
-+++.|+||.+|..| +..|++++++++++.+++....+. .+......+...+ +.+..+.+...++++++.+.
T Consensus 205 ~iv~rSfSK~~glaG-lRiGy~i~~~~~i~~l~~~~~~~~--v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~ 281 (351)
T PRK01688 205 LVILRTLSKAFALAG-LRCGFTLANEEVINLLLKVIAPYP--LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAA 281 (351)
T ss_pred EEEEecchHhhcCHH-HHHhHHhCCHHHHHHHHhccCCCC--CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999998555 346888999999988887654433 2222222222233 34455556666778888899
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccC
Q 009172 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 503 (541)
Q Consensus 424 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~ 503 (541)
|++++.+..+ +|. .++++++.+++ ...+.+.|...++.+..++.+
T Consensus 282 L~~~~~~~~~-~ps----------------~~nfi~~~~~~----~~~l~~~L~~~gi~vr~~~~~-------------- 326 (351)
T PRK01688 282 LKEIPCVEQV-FDS----------------ETNYILARFTA----SSAVFKSLWDQGIILRDQNKQ-------------- 326 (351)
T ss_pred HHhCCCCCeE-CCC----------------CCcEEEEEcCC----HHHHHHHHHHCCeEEEECCCc--------------
Confidence 9877654323 332 46788888862 234555555556665533210
Q ss_pred CHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 504 SQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 504 ~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
.|. ++++|||+|.+ +..+.|.++|
T Consensus 327 -------~~~-~~~iRis~~~~---~e~~~l~~al 350 (351)
T PRK01688 327 -------PGL-SNCLRITIGTR---EECQRVIDAL 350 (351)
T ss_pred -------CCC-CCeEEEeCCCH---HHHHHHHHhh
Confidence 122 47899999953 3344455544
No 90
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.92 E-value=2.5e-23 Score=220.84 Aligned_cols=288 Identities=14% Similarity=0.165 Sum_probs=192.8
Q ss_pred CchhHHHHHHHHHHHh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEE
Q 009172 208 GNPTTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~----g~----~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
+.+...+||+++|+++ |. ++.+++++|++|+.+++.+++++||+|++++|+|.+... .+...|+++..
T Consensus 68 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~----~~~~~g~~~~~ 143 (391)
T PRK08361 68 PNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVE----DAKIAEAKPIR 143 (391)
T ss_pred CCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH----HHHHcCCEEEE
Confidence 3456778999999886 32 355666666799999999999999999999999988653 33445777776
Q ss_pred eCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc----c--
Q 009172 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A-- 343 (541)
Q Consensus 280 vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~----~-- 343 (541)
++. .|++++++++++ ++++|++++|+||||.++| +++|.++|+++++++|+|++|....... +
T Consensus 144 v~~~~~~~~~~d~~~l~~~i~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 222 (391)
T PRK08361 144 IPLREENEFQPDPDELLELITK-RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMI 222 (391)
T ss_pred EecCCccCCCCCHHHHHHhccc-ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHh
Confidence 642 478999999987 4999999999999999999 7889999999999999999986543211 1
Q ss_pred -cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH------HHHHHHHHHHHH
Q 009172 344 -LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHLRVQQQNST 416 (541)
Q Consensus 344 -l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~------tl~~r~~~~~~n 416 (541)
.....++++.|+||.++.+| ...|++++++++++.+...........+.....++...++ .+....++..++
T Consensus 223 ~~~~~~~i~~~s~SK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 301 (391)
T PRK08361 223 KYAPDNTILANSFSKTFAMTG-WRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNER 301 (391)
T ss_pred hcCCCCEEEEecCchhcCCcH-hhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHH
Confidence 11235789999999998665 3478999999998888766544333444444444433442 233334445566
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccceecC
Q 009172 417 ALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 417 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~p 495 (541)
...+.+.|++.+.+. +..|. .|.++|++++.......+|.+.+ +..++.+..|..+..
T Consensus 302 ~~~~~~~L~~~~~~~-~~~p~----------------g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~---- 360 (391)
T PRK08361 302 RKLVLKRLKEMPHIK-VFEPK----------------GAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGK---- 360 (391)
T ss_pred HHHHHHHHHhCCCCe-ecCCC----------------EEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCC----
Confidence 777788888765542 22221 34467888863111233455444 335666665543210
Q ss_pred cccccccCCHHHHHhcCCCCCeEEEEecCCC--HHHHHHHHHHHHh
Q 009172 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVED--FEDLKADVLQALH 539 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed--~edli~dL~~AL~ 539 (541)
..+++|||+++..+ .++.++.|.+.++
T Consensus 361 -----------------~~~~~iRi~~~~~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 361 -----------------AGEGYIRISYATSKEKLIEAMERMEKALE 389 (391)
T ss_pred -----------------CCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 12478999999632 2233444444444
No 91
>PRK07682 hypothetical protein; Validated
Probab=99.92 E-value=1.9e-23 Score=220.56 Aligned_cols=286 Identities=11% Similarity=0.137 Sum_probs=190.4
Q ss_pred chhHHHHHHHHHHHhC----C----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEE
Q 009172 209 NPTTVVVEEKMSALEG----A----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g----~----~-~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
.+...+||+++|++++ . + +.+++++|++|+.+++.+++++||+|++++|+|+..... +...|.++..
T Consensus 56 ~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~----~~~~g~~~~~ 131 (378)
T PRK07682 56 NAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPL----VTLAGGVPVP 131 (378)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHH----HHHcCCEEEE
Confidence 4567788888888774 2 2 355555556999999999999999999999999875533 3334666555
Q ss_pred eCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc------c
Q 009172 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK------A 343 (541)
Q Consensus 280 vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~------~ 343 (541)
++. .|++++++++++ ++++|++++|+||||.+++ +++|.++|++|++++|+|++|....... .
T Consensus 132 ~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 210 (378)
T PRK07682 132 VATTLENEFKVQPAQIEAAITA-KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFAS 210 (378)
T ss_pred eecCCccCCCCCHHHHHhhcCc-ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhh
Confidence 532 378999999877 5999999999999999987 7788999999999999999987543211 1
Q ss_pred c-c-cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHH
Q 009172 344 L-S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTA 417 (541)
Q Consensus 344 l-~-~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t----l~~r~~~~~~na 417 (541)
+ . ....+++.|+||.++.+| ...|++++++++++.+...........+.....++...++. +....+...+++
T Consensus 211 ~~~~~~~~i~~~S~SK~~~~~G-lR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 289 (378)
T PRK07682 211 IKGMRERTILISGFSKGFAMTG-WRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRR 289 (378)
T ss_pred cccccCCEEEEecCcccccChh-hhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 1 1 134689999999998554 34789999999999887765443334445544444444432 333344456777
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccceecCc
Q 009172 418 LRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 418 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa 496 (541)
+.+.+.|+++ ++. +..| ..|.++|+.++........|.+.+ +..++.+..|..+. +
T Consensus 290 ~~~~~~L~~~-~~~-~~~p----------------~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~----~- 346 (378)
T PRK07682 290 NFFVTSFNEI-GLT-CHVP----------------GGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFG----E- 346 (378)
T ss_pred HHHHHHHHHC-CCc-cCCC----------------CeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhC----c-
Confidence 7788888875 221 2112 134466777642111234555554 34577777664321 0
Q ss_pred ccccccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009172 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL~~AL~ 539 (541)
-.+++||||++.+ +.++.++.|.++|+
T Consensus 347 ----------------~~~~~iRis~~~~~~~l~~~l~~l~~~l~ 375 (378)
T PRK07682 347 ----------------SGEGFIRCSYATSLEQLQEAMKRMKRFVE 375 (378)
T ss_pred ----------------CCCCeEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 1257999999973 23444555555554
No 92
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.92 E-value=6e-23 Score=214.74 Aligned_cols=281 Identities=17% Similarity=0.186 Sum_probs=190.2
Q ss_pred CCCCchh-HHHHHHHHHHHh----CC---Cc-EEEeCCHH-HHHHHHHHHhccCC---CEEEEcCCCCcchHHHHHhhcc
Q 009172 205 GRYGNPT-TVVVEEKMSALE----GA---ES-TVIMASGM-SASTVMLLALVPAG---GHIVTTTDCYRKTRIFIETVLP 271 (541)
Q Consensus 205 ~R~~~p~-~~~Le~~LA~l~----g~---~~-~i~~sSG~-~Ai~~al~all~~G---D~VIv~~~~y~~~~~~~~~~l~ 271 (541)
.+|+.|. ...|++++++++ |. .+ .|++++|+ +++..++.+++++| |+|++++|+|..... .++
T Consensus 30 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~----~~~ 105 (350)
T TIGR03537 30 SQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYER----GAL 105 (350)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHH----HHH
Confidence 3455543 568888888875 52 23 56667766 89999999999887 699999999998664 345
Q ss_pred cCCcEEEEeCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc
Q 009172 272 KMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ 341 (541)
Q Consensus 272 ~~Gi~v~~vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~ 341 (541)
..|++++.++. .|++++++++++ ++|+|++++|+||||.+++ +++|.++|+++|+++|+|++|......
T Consensus 106 ~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~ 184 (350)
T TIGR03537 106 FAGGEPTAVKLKKEDGFLLRLEKVEKSILE-ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFG 184 (350)
T ss_pred hcCCEEEEcccCcccCCccCHHHHHHhhhh-ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccC
Confidence 56888877653 278999998877 5999999999999999999 788999999999999999998754321
Q ss_pred cc----c--ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHH
Q 009172 342 KA----L--SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQ 412 (541)
Q Consensus 342 ~~----l--~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l---~tl~~r~~~ 412 (541)
.+ . .....+++.|+||.++.+| ...|++++++++.+.++.....++...+.....++...+ +.+..+.++
T Consensus 185 ~~~~~~~~~~~~~~i~~~s~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~ 263 (350)
T TIGR03537 185 EPPHSALEVGIENVLAFHSLSKRSGMTG-YRSGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKI 263 (350)
T ss_pred CCCCchhhcCcCCEEEEeecccccCCcc-ccceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHH
Confidence 11 1 1223588999999998666 457899999999988887665555544443333332333 233334455
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccce
Q 009172 413 QNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 492 (541)
Q Consensus 413 ~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~ 492 (541)
..++...+.+.|+++ ++ .+..| ..|.+++++++.. ....++.+.|...++.+..|..+..
T Consensus 264 l~~~~~~~~~~l~~~-g~-~~~~~----------------~g~~~~~~~~~~~-~~~~~l~~~L~~~gv~v~~g~~f~~- 323 (350)
T TIGR03537 264 FKRKRDLFIEFFNKV-GL-EYLYP----------------DATFYLWVKVPSG-IDAKDYALRLLENGIVVAPGENFGS- 323 (350)
T ss_pred HHHHHHHHHHHHHHC-CC-cccCC----------------CeEEEEEEECCCC-CCHHHHHHHHHHCCEEEcCchhhCC-
Confidence 556677777778765 22 12211 1344688988753 2334566666555666665533210
Q ss_pred ecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHH
Q 009172 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKA 532 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~ 532 (541)
..++++||+++ .+.+++.+
T Consensus 324 --------------------~~~~~~Ri~~~-~~~~~~~~ 342 (350)
T TIGR03537 324 --------------------GEEGYVRVALV-PTLEECEE 342 (350)
T ss_pred --------------------CCCCEEEEEec-CCHHHHHH
Confidence 02578999997 34444433
No 93
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=9.5e-24 Score=221.82 Aligned_cols=285 Identities=14% Similarity=0.226 Sum_probs=196.0
Q ss_pred CCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
+.+|+.+...+||+.+|+++|.+ +.|++++|+ +++..++.+++++||+|++++|+|..... .....|+++..++
T Consensus 61 ~~~y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~~~ 136 (367)
T PRK02731 61 LHRYPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPI----AAQAVGAKPVEVP 136 (367)
T ss_pred hcCCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHH----HHHHcCCeEEEec
Confidence 45666666789999999999874 556677776 78888888899999999999999965432 2345688888776
Q ss_pred C----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEEcCCCCCCcc-------cccc-cC
Q 009172 282 P----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-------KALS-LG 347 (541)
Q Consensus 282 ~----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~--gillvvDea~a~~~~~-------~~l~-~g 347 (541)
. .|++++++++++ ++++|++++|+||||.++|.++|.++++.+ |+++|+|++|...... .... ..
T Consensus 137 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 215 (367)
T PRK02731 137 AKDYGHDLDAMLAAVTP-RTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFP 215 (367)
T ss_pred ccCCCCCHHHHHHHhCC-CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcC
Confidence 4 378999999976 599999999999999999999999998874 8999999997643321 1111 12
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHH
Q 009172 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEIL 424 (541)
Q Consensus 348 aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---l~~r~~~~~~na~~la~~L 424 (541)
..+++.|+||.+|.+| ...|++++++++++.+......++ .+....+.+...++. +....+...++.+.+.+.|
T Consensus 216 ~~i~~~S~SK~~g~~G-~RiG~l~~~~~~~~~l~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L 292 (367)
T PRK02731 216 NVVVTRTFSKAYGLAG-LRVGYGIAPPEIIDALNRVRQPFN--VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFL 292 (367)
T ss_pred CEEEEeeehHhhcCcc-cceeeeeCCHHHHHHHHHccCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578899999997555 357999999999988876554333 244444444444432 2223333445566677777
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCC
Q 009172 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 504 (541)
Q Consensus 425 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~ 504 (541)
+++ ++. + +| ..|+++++.++.. ....+|.+.|...++.+..|..+
T Consensus 293 ~~~-g~~-~-~~----------------~~g~~~~i~~~~~-~~~~~~~~~L~~~gI~v~~~~~~--------------- 337 (367)
T PRK02731 293 AEL-GLE-Y-IP----------------SVGNFILVDFDDG-KDAAEAYQALLKRGVIVRPVAGY--------------- 337 (367)
T ss_pred HHC-CCc-c-CC----------------CCceEEEEECCCC-CCHHHHHHHHHHCCEEEEeCCCC---------------
Confidence 765 221 1 12 1467899998532 23455666665567766654321
Q ss_pred HHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009172 505 QSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 539 (541)
Q Consensus 505 ~~~~~~~gi~~~~IRlSvG~-Ed~edli~dL~~AL~ 539 (541)
| .+++||||++. ++.+.+++.|++.++
T Consensus 338 -------~-~~~~iRis~~~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 338 -------G-LPNALRITIGTEEENRRFLAALKEFLA 365 (367)
T ss_pred -------C-CCCeEEEecCCHHHHHHHHHHHHHHHh
Confidence 1 14689999985 345556666655554
No 94
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.92 E-value=6.4e-23 Score=217.22 Aligned_cols=286 Identities=12% Similarity=0.136 Sum_probs=188.5
Q ss_pred CCCCchh-HHHHHHHHHHHh----C--C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCc
Q 009172 205 GRYGNPT-TVVVEEKMSALE----G--A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 205 ~R~~~p~-~~~Le~~LA~l~----g--~--~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
.+|+++. ..+|++++|+++ | . ++.++++++++|+.+++.+++++||+|+++.|+|......+ ...|.
T Consensus 60 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~----~~~g~ 135 (384)
T PRK06348 60 TRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQI----EMVGG 135 (384)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHH----HHcCC
Confidence 4455553 467888888876 2 2 34455555559999999999999999999999999866443 34466
Q ss_pred EEEEeCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc---
Q 009172 276 TATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK--- 342 (541)
Q Consensus 276 ~v~~vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~--- 342 (541)
++..++. .|+++|++++++ ++++|++++|+||||.+++ +++|.++|+++|++||+|++|.......
T Consensus 136 ~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 214 (384)
T PRK06348 136 KPIILETYEEDGFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV 214 (384)
T ss_pred EEEEecCCcCcCCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCcc
Confidence 6665542 378999998876 5899999999999999997 6688888999999999999987643211
Q ss_pred c---cc--cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHH
Q 009172 343 A---LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQ 413 (541)
Q Consensus 343 ~---l~--~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t----l~~r~~~~ 413 (541)
+ +. .+..+++.|+||.++.+| ...|++++++++++.+...........+.....++...+.. +....+..
T Consensus 215 ~~~~~~~~~~~vi~~~SfSK~~~l~G-lRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 293 (384)
T PRK06348 215 PMATLAGMPERTITFGSFSKDFAMTG-WRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEF 293 (384)
T ss_pred chhhcCCCcCcEEEEecchhccCCcc-ccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 1 11 234689999999998555 45899999999988888766544444455444444433332 22222334
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccce
Q 009172 414 NSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIV 492 (541)
Q Consensus 414 ~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L-~~~~iavS~G~~~sl~ 492 (541)
.++.+.+.+.|++.+.+ .+..|. .|.++|++++........|.+.+ +..++.+..|..+..
T Consensus 294 ~~r~~~~~~~L~~~~~~-~~~~p~----------------gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~- 355 (384)
T PRK06348 294 QKRLEYAYKRIESIPNL-SLHPPK----------------GSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGE- 355 (384)
T ss_pred HHHHHHHHHHHhcCCCc-eeccCC----------------eeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhcc-
Confidence 45566777788765543 222221 34457888863111233455444 345677766644310
Q ss_pred ecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009172 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVL 535 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~ 535 (541)
...+.||||++. +.+++.+.++
T Consensus 356 --------------------~~~~~iRi~~~~-~~~~l~~al~ 377 (384)
T PRK06348 356 --------------------SGEGYIRLACTV-GIEVLEEAFN 377 (384)
T ss_pred --------------------CCCCeEEEEecC-CHHHHHHHHH
Confidence 124789999985 5555554443
No 95
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.92 E-value=1.3e-23 Score=223.95 Aligned_cols=300 Identities=18% Similarity=0.205 Sum_probs=196.9
Q ss_pred CchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 208 GNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~al----l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
.....+++++.|++++|.+ +.+++++|++++.+++.++ .++||+|+++.++|+++...+. .++..|+++++++
T Consensus 45 ~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~-~~~~~g~~v~~v~ 123 (402)
T TIGR02006 45 AEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCR-YLEREGFEVTYLP 123 (402)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHH-HHHhcCCEEEEEc
Confidence 3456788999999999974 4555666678999887765 3689999999999998776653 3455688888886
Q ss_pred C-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEECC
Q 009172 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSA 355 (541)
Q Consensus 282 ~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~S~ 355 (541)
. .|++++++++++ ++++|++++++||||.+.|+++|.++|+++|+++++|++++.+. +.+....++|+++.|+
T Consensus 124 ~~~~~~~d~~~l~~~l~~-~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~ 202 (402)
T TIGR02006 124 PKSNGLIDLEELKAAIRD-DTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISG 202 (402)
T ss_pred cCCCCcCCHHHHHHhcCC-CCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEeh
Confidence 4 379999999987 49999999999999999999999999999999999999987653 3355567899999999
Q ss_pred ccccCCCCCceEEEEEeChHHHHHHHHHh-------hhcCCCccHHHHHHHHHhHHHH----HHHHHHHHHHHHHHHHHH
Q 009172 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HVLGGALNPNAAYLIIRGMKTL----HLRVQQQNSTALRMAEIL 424 (541)
Q Consensus 356 sK~lgg~g~v~gG~vv~~~~li~~l~~~~-------~~~g~~~s~~~a~l~l~~l~tl----~~r~~~~~~na~~la~~L 424 (541)
+|++|++| .|+++.+++...++.... ....++.+......+...++.+ ..+.++..+.+.++.+.|
T Consensus 203 ~K~~gp~G---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l 279 (402)
T TIGR02006 203 HKIYGPKG---IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGI 279 (402)
T ss_pred hhhcCCCc---eEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99988766 455555543322222111 1111233333322222344333 333344555666667777
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCccc--EEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCccccccc
Q 009172 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGG--VVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 425 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~--~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
++.+.+. +..+. .. ...+ .++|... + ...++..++ ++.++.|..++ +...
T Consensus 280 ~~~~~v~-~~~~~-~~------------~~p~~~~v~f~~~-~---~~~~~~~l~--~i~v~~G~~c~----~~~~---- 331 (402)
T TIGR02006 280 KSIEEVY-LNGDL-EH------------RVPGNLNVSFNYV-E---GESLIMALK--DLAVSSGSACT----SASL---- 331 (402)
T ss_pred hcCCCEE-EeCCc-cc------------cCCCeEEEEEeCc-C---HHHHHHhcC--CEEEechhhcC----CCCC----
Confidence 7666653 22111 00 0122 3445421 1 223444554 67777775432 1110
Q ss_pred CCHHHHHhcCCC----CCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 503 LSQSERLKYGIM----DNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 503 ~~~~~~~~~gi~----~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
-+....+.+|+. .+.||+|++..++++.++.|.++|.+
T Consensus 332 ~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~ 373 (402)
T TIGR02006 332 EPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKS 373 (402)
T ss_pred CccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 012234456664 47999999998888888888877764
No 96
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.92 E-value=2.5e-23 Score=216.78 Aligned_cols=280 Identities=17% Similarity=0.258 Sum_probs=195.9
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 205 GRYGNPTTVVVEEKMSALEGAE-S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~~-~-~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+.+...+||+.+|++++.+ + .++++++++++..++.+++++||+|++++|+|+... ......|+++..++.
T Consensus 49 ~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~ 124 (346)
T TIGR01141 49 HRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYE----ISAKIHGAEVVKVPL 124 (346)
T ss_pred hcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEecc
Confidence 4566677789999999999963 3 444444558999999999999999999999996533 334556888887753
Q ss_pred -----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEEcCCCCCCcc-ccc----ccCCcE
Q 009172 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQ-KAL----SLGADL 350 (541)
Q Consensus 283 -----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~--gillvvDea~a~~~~~-~~l----~~gaDi 350 (541)
.|++++++++++ ++++|++++|+||||.++|++++.++++.+ |+++|+|++|...... .+. ....++
T Consensus 125 ~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i 203 (346)
T TIGR01141 125 DEDGQLDLEDILVAIDD-KPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLI 203 (346)
T ss_pred CCCCCCCHHHHHHhcCC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEE
Confidence 478999998876 599999999999999999999999999877 9999999997743221 111 123458
Q ss_pred EEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhC
Q 009172 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 351 vv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~---tl~~r~~~~~~na~~la~~L~~~ 427 (541)
++.|+||+++.+| ...|+++++++++++++.....++ .++.....+...++ .+....++..+++..+.+.|+++
T Consensus 204 ~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 280 (346)
T TIGR01141 204 VLRTLSKAFGLAG-LRIGYAIANAEIIDALNKVRAPFN--LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL 280 (346)
T ss_pred EEehhhHhhhchh-hhceeeecCHHHHHHHHhccCCCC--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8899999997665 347899999999888876554333 23333333333332 23444556667788888888887
Q ss_pred CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHH
Q 009172 428 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 507 (541)
Q Consensus 428 p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~ 507 (541)
+++. + +|. .|++++|++++ ..+++.+.|...++.+..|..+.
T Consensus 281 ~g~~-~-~~~----------------~g~~~~~~~~~---~~~~~~~~L~~~gI~v~~g~~f~----------------- 322 (346)
T TIGR01141 281 PGLE-V-YPS----------------DANFVLIRFPR---DADALFEALLEKGIIVRDLNSYP----------------- 322 (346)
T ss_pred CCCE-E-CCC----------------cCCEEEEecCC---CHHHHHHHHHHCCeEEEeCCCcC-----------------
Confidence 6653 2 221 35789999874 34456666655677776653210
Q ss_pred HHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 508 RLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 508 ~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
+. ++.+|+|++. ++.++.+.++|
T Consensus 323 ----~~-~~~iRls~~~---~~~i~~~~~~l 345 (346)
T TIGR01141 323 ----GL-PNCLRITVGT---REENDRFLAAL 345 (346)
T ss_pred ----CC-CCeEEEecCC---HHHHHHHHHHh
Confidence 12 5789999983 34455555554
No 97
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.92 E-value=6.9e-23 Score=217.70 Aligned_cols=285 Identities=13% Similarity=0.104 Sum_probs=185.5
Q ss_pred CCCch-hHHHHHHHHHHHh----CC----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCc
Q 009172 206 RYGNP-TTVVVEEKMSALE----GA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 206 R~~~p-~~~~Le~~LA~l~----g~----~~~i~~sSG-~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
+|+++ ...+|++++|+++ |. ++.+++++| ++++..++.+++++||+|++++|+|+.....+ ...|+
T Consensus 68 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~----~~~g~ 143 (394)
T PRK05942 68 GYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGP----LIAGA 143 (394)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCC
Confidence 34443 3567888888876 42 234555555 59999999999999999999999998865433 34677
Q ss_pred EEEEeCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc----
Q 009172 276 TATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 276 ~v~~vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~---- 341 (541)
++..++. .|++++++++++ ++|+|++++|+||||.+++ +++|.++|+++|+++|+||+|......
T Consensus 144 ~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~ 222 (394)
T PRK05942 144 QIYPIILKPENDWLIDLSSIPEEVAQ-QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQP 222 (394)
T ss_pred EEEEeecCCccCCccCHHHHHHhccc-cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCC
Confidence 7777642 368899988876 5999999999999999998 778888999999999999997643221
Q ss_pred cc---cc--cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHH
Q 009172 342 KA---LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQ 412 (541)
Q Consensus 342 ~~---l~--~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t----l~~r~~~ 412 (541)
.+ +. .+..+++.|+||.++.+| ...|++++++++++.++..........+.....++...++. +....++
T Consensus 223 ~~~~~~~~~~~~~i~~~SfSK~~~~~G-lRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 301 (394)
T PRK05942 223 TSLLEIPGAKDIGVEFHTLSKTYNMAG-WRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQER 301 (394)
T ss_pred CChhhCCCccccEEEEecchhccCChh-hheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 01 11 124578899999997655 45789999999999988766543433444433333334432 2222333
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHH-HcCCCceeecCCCcccc
Q 009172 413 QNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID-ALKIPYIAPSFGGCESI 491 (541)
Q Consensus 413 ~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~-~L~~~~iavS~G~~~sl 491 (541)
..++...+.+.|+++ ++ .+..| ..|.++|+.++... ...++.. .++..++.+..|..+..
T Consensus 302 ~~~~~~~~~~~L~~~-~~-~~~~~----------------~~~~f~~~~~~~~~-~~~~~~~~~l~~~gV~v~~g~~f~~ 362 (394)
T PRK05942 302 YRTRRDFLIQGLGEL-GW-NIPPT----------------KATMYLWVPCPVGM-GSTDFALNVLQKTGVVVTPGNAFGE 362 (394)
T ss_pred HHHHHHHHHHHHHHC-CC-eecCC----------------CeeeEEEEECCCCC-CHHHHHHHHHHHCCEEEeCChhhCc
Confidence 445566677777664 22 12111 13447889987421 1122332 23344666655543210
Q ss_pred eecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHH
Q 009172 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQA 537 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~A 537 (541)
...++|||+++ .+.+.+.+.|++.
T Consensus 363 ---------------------~~~~~iRis~~-~~~~~l~~~l~~l 386 (394)
T PRK05942 363 ---------------------GGEGYVRISLI-ADCDRLGEALDRL 386 (394)
T ss_pred ---------------------CCCCeEEEEec-CCHHHHHHHHHHH
Confidence 12579999998 4456666555543
No 98
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.92 E-value=7.1e-23 Score=216.79 Aligned_cols=283 Identities=17% Similarity=0.180 Sum_probs=185.7
Q ss_pred CCCCchh-HHHHHHHHHHHh----CC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009172 205 GRYGNPT-TVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 205 ~R~~~p~-~~~Le~~LA~l~----g~----~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~G 274 (541)
.+|+.+. ..+|++++++++ |. ++.+++++|+ +++..++..++++||+|++++|+|..... ..+..|
T Consensus 63 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~----~~~~~g 138 (385)
T PRK09276 63 HQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKI----GTIFAG 138 (385)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHH----HHHHcC
Confidence 3454443 578888888877 32 2346666665 99999999999999999999999987543 344567
Q ss_pred cEEEEeCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEEcCCCCCCcc---
Q 009172 275 ITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (541)
Q Consensus 275 i~v~~vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~di---~~Ia~la~~~gillvvDea~a~~~~~--- 341 (541)
.++..++. .|++++++.+.+ ++++|++++|+||||.+++. ++|+++|+++|+++|+|++|......
T Consensus 139 ~~~~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 217 (385)
T PRK09276 139 GEPYFMPLKEENGFLPDLDAIPEDVAK-KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYK 217 (385)
T ss_pred CEEEEEecCCCCCCcCCHHHHHHhccc-cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCC
Confidence 77766542 257888888876 59999999999999999984 68888899999999999998753211
Q ss_pred -cc---cc--cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHH
Q 009172 342 -KA---LS--LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQ 411 (541)
Q Consensus 342 -~~---l~--~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~----tl~~r~~ 411 (541)
.. +. .+..+++.|+||.+|.+| ...|++++++++++.+...........+......+...+. .+....+
T Consensus 218 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 296 (385)
T PRK09276 218 PPSFLEVPGAKDVGIEFHSLSKTYNMTG-WRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRK 296 (385)
T ss_pred CCChhccCCCcCCEEEEecchhhcCCcc-hhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHH
Confidence 11 11 234688999999998776 3478999999999988876554444344433333333332 2233334
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCccc
Q 009172 412 QQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCES 490 (541)
Q Consensus 412 ~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L-~~~~iavS~G~~~s 490 (541)
+..++++.+.+.|+++ .+. +..|. .|.++++.+++.. ...++.+.+ +..++.+..|..+.
T Consensus 297 ~~~~~~~~l~~~L~~~-~~~-~~~~~----------------~~~~~~v~~~~~~-~~~~l~~~ll~~~gi~v~~g~~f~ 357 (385)
T PRK09276 297 IYQERRDILVEGLRKL-GLE-VEPPK----------------ATFYVWAPVPKGY-TSAEFATLLLDKAGVVVTPGNGFG 357 (385)
T ss_pred HHHHHHHHHHHHHHhC-CCc-ccCCC----------------cceEEEEECCCCC-CHHHHHHHHHHhCCEEECCchhhC
Confidence 4456677788888765 221 22121 3445789886431 233444443 23466666553321
Q ss_pred ceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009172 491 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 491 l~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL 534 (541)
.-.+++||||++. +.+++.+.|
T Consensus 358 ---------------------~~~~~~~Ris~~~-~~~~l~~~l 379 (385)
T PRK09276 358 ---------------------EYGEGYFRIALTV-PDERIEEAV 379 (385)
T ss_pred ---------------------CCCCCeEEEEeCC-CHHHHHHHH
Confidence 0124799999995 444444444
No 99
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.92 E-value=1.5e-22 Score=211.06 Aligned_cols=282 Identities=18% Similarity=0.204 Sum_probs=202.7
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHH
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~L 288 (541)
.+...+++++|+++++.++.+++++|++++..++.+++++||+|+++++.|...... ++..|+++..++..|++++
T Consensus 60 ~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l 135 (360)
T TIGR00858 60 SPLHEELEEELAEWKGTEAALLFSSGYLANVGVISALVGKGDLILSDALNHASLIDG----CRLSGARVRRYRHNDVEHL 135 (360)
T ss_pred cHHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHhCCCCCEEEEEccccHHHHHH----HHhcCCceEEecCCCHHHH
Confidence 367889999999999988899999999888778888899999999999999876543 3456788888887889999
Q ss_pred HHhccCC---CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc-cc--c------c-ccCCcEEEECC
Q 009172 289 EAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QK--A------L-SLGADLVLHSA 355 (541)
Q Consensus 289 e~ai~~~---~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~-~~--~------l-~~gaDivv~S~ 355 (541)
++.++++ ++++|++++++|++|.+.|+++|.++|+++|+++|+|++|..+.. .. . . ..+.|+++.|+
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~ 215 (360)
T TIGR00858 136 ERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTL 215 (360)
T ss_pred HHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEec
Confidence 9988642 479999999999999999999999999999999999999864321 11 0 1 23678999999
Q ss_pred ccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCCCc
Q 009172 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAHPKV 430 (541)
Q Consensus 356 sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~--~g~~~s~~~a~l~l~~l~---tl~~r~~~~~~na~~la~~L~~~p~v 430 (541)
||.+++. ||++++++++++.+...... .+...++.....+...++ ......++..++.+.+.+.|++++ +
T Consensus 216 sK~~~~~----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~ 290 (360)
T TIGR00858 216 SKALGSY----GAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG-F 290 (360)
T ss_pred hhhhhcc----CcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-C
Confidence 9999874 48999998888887654322 223334444333333443 223345666778888888888753 2
Q ss_pred eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHh
Q 009172 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 510 (541)
Q Consensus 431 ~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~ 510 (541)
. + ++ ..++++++.++.. ....+|.+.|...++.+..+..... +
T Consensus 291 ~-~-~~----------------~~~~~~~~~~~~~-~~~~~~~~~l~~~gI~v~~~~~~~~---~--------------- 333 (360)
T TIGR00858 291 T-L-MP----------------SCTPIVPVIIGDN-ASALALAEELQQQGIFVGAIRPPTV---P--------------- 333 (360)
T ss_pred c-c-CC----------------CCCCEEEEEeCCH-HHHHHHHHHHHHCCeeEeeeCCCCC---C---------------
Confidence 1 1 11 1467899998632 3455677777666766654322100 0
Q ss_pred cCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 511 YGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 511 ~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
-..+.||+|++..++++.++.+.++|
T Consensus 334 --~~~~~iRis~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 334 --AGTSRLRLTLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred --CCCceEEEEEcCCCCHHHHHHHHHhh
Confidence 02358999999877777667666665
No 100
>PRK12414 putative aminotransferase; Provisional
Probab=99.92 E-value=2.2e-22 Score=213.13 Aligned_cols=280 Identities=14% Similarity=0.127 Sum_probs=181.5
Q ss_pred hHHHHHHHHHHHhCC-----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC---
Q 009172 211 TTVVVEEKMSALEGA-----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~-----~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
..+.+++.+++++|. ++.+++++|++++..++++++.+||+|+++.|+|...... +...|.++..++.
T Consensus 71 lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~~ 146 (384)
T PRK12414 71 LREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPI----VRLQGATPVAIKLSPE 146 (384)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHH----HHHcCCEEEEEecCcc
Confidence 344455555556675 2466777777999999999999999999999999875533 3345777666643
Q ss_pred ---CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc----cccc-----cC
Q 009172 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALS-----LG 347 (541)
Q Consensus 283 ---~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~----~~l~-----~g 347 (541)
.|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... .++. .+
T Consensus 147 ~~~~d~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 225 (384)
T PRK12414 147 DFRVNWDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAE 225 (384)
T ss_pred ccccCHHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccC
Confidence 368999999876 5999999999999999975 678888899999999999998653221 1111 12
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHH
Q 009172 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEIL 424 (541)
Q Consensus 348 aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---l~~r~~~~~~na~~la~~L 424 (541)
..+++.|+||.++.+| ...||+++++++++.+...........+.....++...++. .....+...++++.+.+.|
T Consensus 226 ~~i~~~SfSK~~~~pG-lRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L 304 (384)
T PRK12414 226 RSVIVSSFGKSYHVTG-WRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLAREL 304 (384)
T ss_pred cEEEEecccccccCcc-ceEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999997565 45799999999998888766433333333343333333321 1222334456677778888
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC--CHHHHHHHHHHcCCCceeecCCCcccceecCccccccc
Q 009172 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 425 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g--~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
+++. +. +..| ..|.++|+.++. +....+.+.+.++..++.+..|..+..
T Consensus 305 ~~~g-~~-~~~~----------------~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~----------- 355 (384)
T PRK12414 305 AGSR-FE-LLPS----------------EGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYT----------- 355 (384)
T ss_pred HhCC-Ce-ecCC----------------CcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcC-----------
Confidence 8752 22 2211 133456667652 111222222445556777776654321
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009172 503 LSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL 534 (541)
.+..+++||||++. +.+++.+.+
T Consensus 356 --------~~~~~~~iRis~~~-~~~~~~~~~ 378 (384)
T PRK12414 356 --------DGTDTGLIRLSFSK-DDATLVEGA 378 (384)
T ss_pred --------CCCCCCEEEEEecC-CHHHHHHHH
Confidence 01235799999997 445444444
No 101
>PLN02187 rooty/superroot1
Probab=99.92 E-value=1.7e-22 Score=218.92 Aligned_cols=286 Identities=15% Similarity=0.140 Sum_probs=186.8
Q ss_pred chhHHHHHHHHHHHhC------C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 209 NPTTVVVEEKMSALEG------A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g------~--~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.+....||++||++++ . +++++++++++++.+++.++++|||+|++++|+|..... .+...|++++.+
T Consensus 107 ~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~----~~~~~g~~~~~~ 182 (462)
T PLN02187 107 GAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDA----RAAYSGLEVRKF 182 (462)
T ss_pred CCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHH----HHHHcCCEEEEE
Confidence 4457789999999873 1 344455455599999999999999999999999998543 345567777766
Q ss_pred CC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc----cc-c
Q 009172 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL-S 345 (541)
Q Consensus 281 d~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~----~l-~ 345 (541)
+. .|+++|++++++ ++++|++++|+||||.+++ +++|+++|+++|++||+||+|....... ++ .
T Consensus 183 ~l~~~~~~~~d~~~l~~~~~~-~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~ 261 (462)
T PLN02187 183 DLLPEKEWEIDLEGIEAIADE-NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGK 261 (462)
T ss_pred eCccccCCccCHHHHHHhcCC-CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHH
Confidence 43 268999999877 4899999999999999998 6788888999999999999987643211 11 1
Q ss_pred c---CCcEEEECCccccCCCCCceEEEEEeC-hH----HHHHHHHHhhhcCC--CccHHHHHHHHHhHH-----HHHHHH
Q 009172 346 L---GADLVLHSATKFIGGHNDVLAGSISGS-GK----LVTQIRNLHHVLGG--ALNPNAAYLIIRGMK-----TLHLRV 410 (541)
Q Consensus 346 ~---gaDivv~S~sK~lgg~g~v~gG~vv~~-~~----li~~l~~~~~~~g~--~~s~~~a~l~l~~l~-----tl~~r~ 410 (541)
+ ...+++.|+||.|+.+|. ..||++++ ++ +++.+......++. ..+.+...++...++ .+....
T Consensus 262 ~~~~~~vi~l~SfSK~f~~pGl-RiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~ 340 (462)
T PLN02187 262 FASIVPVLTLAGISKGWVVPGW-KIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKN 340 (462)
T ss_pred hccCCcEEEEecchhhcCCccc-eeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHH
Confidence 1 124888999999988874 57888873 32 23455554443332 223444443333332 344445
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC----CHHHHHHHH-HHcCCCceeecC
Q 009172 411 QQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DLTATIKFI-DALKIPYIAPSF 485 (541)
Q Consensus 411 ~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g----~~~~~~~~l-~~L~~~~iavS~ 485 (541)
+...++++.+.+.|++++.+..+..| ..|.+++++++. +......++ ..++..++.+..
T Consensus 341 ~~l~~~r~~l~~~L~~~~~~~~~~~P----------------~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~p 404 (462)
T PLN02187 341 KILKHNVDLVCDRLKDIPCVVCPKKP----------------ESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLP 404 (462)
T ss_pred HHHHHHHHHHHHHHhhCCCCcCCCCC----------------CEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEEC
Confidence 55667778888888876543111122 146778887742 110122333 333555777766
Q ss_pred CCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009172 486 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 486 G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL~~AL~ 539 (541)
|..+ | .+++|||+++.. ..++.++.|.+.++
T Consensus 405 G~~f----------------------g-~~~~iRis~~~~~e~l~~al~rL~~~l~ 437 (462)
T PLN02187 405 GDAL----------------------G-LKNWMRITIGVEAHMLEDALERLKGFCT 437 (462)
T ss_pred cccc----------------------C-CCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 6432 1 257999999974 23444555555543
No 102
>PRK04311 selenocysteine synthase; Provisional
Probab=99.92 E-value=1.4e-23 Score=225.80 Aligned_cols=213 Identities=23% Similarity=0.308 Sum_probs=171.3
Q ss_pred hhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCc---chHHHHHhhcccCCcEEEEeCC---C
Q 009172 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYR---KTRIFIETVLPKMGITATVIDP---A 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~---~~~~~~~~~l~~~Gi~v~~vd~---~ 283 (541)
+..+.+|+.+|+++|++++++++||++|+.+++.+ +.+||+||+++.+|. +.+.+ ...++..|+++.+++. .
T Consensus 127 ~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e~~~~ggs~~i-~~~~~~~G~~l~~v~~~~~t 204 (464)
T PRK04311 127 SRDRALAALLCALTGAEDALVVNNNAAAVLLALNA-LAAGKEVIVSRGELVEIGGAFRI-PDVMRQAGARLVEVGTTNRT 204 (464)
T ss_pred hHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHH-hCCCCEEEEcchhhhhcCcchhh-HHHHHHCCcEEEEECCCCCC
Confidence 45679999999999999999999999999988865 589999999987543 34443 3455778999998875 4
Q ss_pred CHHHHHHhccCCCeeEEEEeCCCCCC----CcccCHHHHHHHHHhCCCEEEEEcC---------CC---CCCcccccccC
Q 009172 284 DMEGLEAALNNNNVSLFFTESPTNPF----LRCVDVKLVSDLCHKKGAIVCIDGT---------FA---TPLNQKALSLG 347 (541)
Q Consensus 284 dle~Le~ai~~~~tklV~lesp~NPt----G~v~di~~Ia~la~~~gillvvDea---------~a---~~~~~~~l~~g 347 (541)
++++++++|++ +|++|++++++|++ +...|+++|+++||+||+++++|+. ++ .+..+++++.|
T Consensus 205 ~~~dle~aI~~-~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~G 283 (464)
T PRK04311 205 HLRDYEQAINE-NTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAG 283 (464)
T ss_pred CHHHHHHhcCc-cCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcC
Confidence 68899999987 49999999999983 4678999999999999999999994 21 23335667799
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHH--Hhh---hcCCCccHH-----------HHHHHHHhHHHHHHHHH
Q 009172 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN--LHH---VLGGALNPN-----------AAYLIIRGMKTLHLRVQ 411 (541)
Q Consensus 348 aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~--~~~---~~g~~~s~~-----------~a~l~l~~l~tl~~r~~ 411 (541)
+|++++|++|+++|+. +|+++++++++++++. ..+ ..+.+++++ .++..+++++++..|++
T Consensus 284 aDiv~fSg~K~LgGp~---~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~ 360 (464)
T PRK04311 284 VDLVTFSGDKLLGGPQ---AGIIVGKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPE 360 (464)
T ss_pred CcEEEecCcccccCCc---eEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHH
Confidence 9999999999999884 8999999999887763 111 123333443 34445567778999999
Q ss_pred HHHHHHHHHHHHHHhCC
Q 009172 412 QQNSTALRMAEILEAHP 428 (541)
Q Consensus 412 ~~~~na~~la~~L~~~p 428 (541)
++.+++++++++|++++
T Consensus 361 ~~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 361 ELRARAERLAAALKAAL 377 (464)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999875
No 103
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=2.9e-23 Score=217.63 Aligned_cols=279 Identities=15% Similarity=0.206 Sum_probs=191.6
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+.+...+|++++|++++.+ +.|++++|+ +++..++.+++++||+|++++|+|+.... .....|.++..++.
T Consensus 59 ~~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~----~~~~~g~~~~~~~~ 134 (359)
T PRK03158 59 ALYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRH----NAIIEGAEVREVPL 134 (359)
T ss_pred hcCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHH----HHHHcCCeEEEEec
Confidence 3456667889999999999863 445555555 89999999999999999999999987543 33445777777653
Q ss_pred ----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEEcCCCCCCccc----cc----ccCC
Q 009172 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK----AL----SLGA 348 (541)
Q Consensus 283 ----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~--~gillvvDea~a~~~~~~----~l----~~ga 348 (541)
.|++++++++++ ++++|++++|+||||.+++.++|.++++. +|+++|+||+|....... .. ..+.
T Consensus 135 ~~~~~d~~~l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 213 (359)
T PRK03158 135 KDGGHDLEAMLKAIDE-QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYEN 213 (359)
T ss_pred CCCCcCHHHHHHhcCC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCC
Confidence 378999988876 58999999999999999999999998876 599999999986543211 11 2345
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHH
Q 009172 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEILE 425 (541)
Q Consensus 349 Divv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---l~~r~~~~~~na~~la~~L~ 425 (541)
.+++.|+||.++.+| +..|++++++++++.+......++ .+.....++...++. +....+...++.+.+.+.|+
T Consensus 214 vi~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 290 (359)
T PRK03158 214 LIVLRTFSKAYGLAA-LRVGYGIASEELIEKLNIARPPFN--TTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCK 290 (359)
T ss_pred EEEEEechHhhcCcc-hhhehhcCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999998665 357899999999998877654333 344444444444432 22223334455666667777
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCH
Q 009172 426 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 505 (541)
Q Consensus 426 ~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~ 505 (541)
++ .+. + +|. .|+++++.++.+ ...+.+.|...++.+..|..+
T Consensus 291 ~~-~~~-~-~~~----------------~g~~i~~~~~~~---~~~~~~~l~~~gv~v~~g~~f---------------- 332 (359)
T PRK03158 291 EY-GLF-Y-YPS----------------QTNFIFVDTGRD---ANELFEALLKKGYIVRSGAAL---------------- 332 (359)
T ss_pred HC-CCe-e-CCC----------------cCcEEEEECCCC---HHHHHHHHHHCCeEEeeCCCC----------------
Confidence 65 221 1 221 466888887422 234555554457777665432
Q ss_pred HHHHhcCCCCCeEEEEecCC-CHHHHHHHHHH
Q 009172 506 SERLKYGIMDNLVRFSFGVE-DFEDLKADVLQ 536 (541)
Q Consensus 506 ~~~~~~gi~~~~IRlSvG~E-d~edli~dL~~ 536 (541)
| .+++|||+++.. +.+.+++.|++
T Consensus 333 ------~-~~~~iRi~~~~~~~~~~l~~al~~ 357 (359)
T PRK03158 333 ------G-FPTGVRITIGLKEQNDKIIELLKE 357 (359)
T ss_pred ------C-CCCeEEEecCCHHHHHHHHHHHHH
Confidence 1 146899999953 34555555544
No 104
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=2.5e-23 Score=218.02 Aligned_cols=284 Identities=15% Similarity=0.198 Sum_probs=188.4
Q ss_pred CCCCchhHHHHHHHHHHHhCCC--cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 205 GRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~~--~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
.+|+.+...+||+.+|+++|.+ ..+++++|+ +++..++..++++||+|++++|+|.... ..++..|+++..++
T Consensus 64 ~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~~~ 139 (361)
T PRK00950 64 HRYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYE----ISAKAHGAKPVYAK 139 (361)
T ss_pred cCCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEee
Confidence 4566677799999999999863 344547887 7888888888999999999999987643 33455688887775
Q ss_pred C-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc--ccc--ccCCcEEE
Q 009172 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KAL--SLGADLVL 352 (541)
Q Consensus 282 ~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~--~~l--~~gaDivv 352 (541)
. .|++++++++++ ++++|++++|+||||.++|.+++.++|+++|+++|+|++|...... ..+ .....+++
T Consensus 140 ~~~~~~~~~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~ 218 (361)
T PRK00950 140 REEDFSLDVDSVLNAITE-KTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIG 218 (361)
T ss_pred cCCCCCcCHHHHHHHhcc-CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEE
Confidence 2 368899998876 5899999999999999999999999999999999999998654321 111 12334788
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Q 009172 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKR 432 (541)
Q Consensus 353 ~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~ 432 (541)
.|+||.+|.+| ...|++++++++++.++.....++ .++.....+...++.. ..+++..+..+...+.|.+.-.+ .
T Consensus 219 ~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~r~~l~~~l~~-~ 293 (361)
T PRK00950 219 RTFSKVFGLAG-LRIGYGFVPEWLIDYYMRAKTPFS--LTRLSQAAAIAALSDK-EYIEKSIEHGIKSREYLYNELPF-K 293 (361)
T ss_pred EeehHhhcCch-hhcchhcCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHhhcCe-e
Confidence 99999998665 457899999999888877654443 3444444444444321 11222222223333333221111 1
Q ss_pred EeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcC
Q 009172 433 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 512 (541)
Q Consensus 433 V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~g 512 (541)
+ +| ..|+++++.+++ ....+|.+.|...++.+..|..+. +
T Consensus 294 ~-~~----------------~~~~~i~~~~~~--~~~~~~~~~l~~~gv~v~~~~~f~---------------------~ 333 (361)
T PRK00950 294 V-YP----------------SEANFVLVDVTP--MTAKEFCEELLKRGVIVRDCTSFR---------------------G 333 (361)
T ss_pred E-CC----------------CcceEEEEECCC--CCHHHHHHHHHHCCEEEeeCCccC---------------------C
Confidence 1 22 146788998853 234456666555566665543210 1
Q ss_pred CCCCeEEEEecCC-CHHHHHHHHHHHH
Q 009172 513 IMDNLVRFSFGVE-DFEDLKADVLQAL 538 (541)
Q Consensus 513 i~~~~IRlSvG~E-d~edli~dL~~AL 538 (541)
..+++||||++.+ +.+.+++.|+++|
T Consensus 334 ~~~~~lRis~~~~~~~~~l~~~L~~il 360 (361)
T PRK00950 334 LGDYYIRVSIGTFEENERFLEILKEIV 360 (361)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHHHh
Confidence 2357899999943 3455555555544
No 105
>PLN02483 serine palmitoyltransferase
Probab=99.92 E-value=2.4e-22 Score=219.04 Aligned_cols=283 Identities=16% Similarity=0.180 Sum_probs=197.8
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHH
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~L 288 (541)
.+..++||++||+++|.++++++++|+.++..++.+++++||+|+++++.|.+... .++..|++++.++..|++++
T Consensus 145 ~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~----~~~~~Ga~v~~~~~~d~~~l 220 (489)
T PLN02483 145 TKLHRELEELVARFVGKPAAIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (489)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHH----HHHHcCCeEEEEeCCCHHHH
Confidence 67899999999999999999999999988888899999999999999999998653 34557899999988888888
Q ss_pred HHhccC------CCe-----e-EEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc----------ccccc
Q 009172 289 EAALNN------NNV-----S-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----------KALSL 346 (541)
Q Consensus 289 e~ai~~------~~t-----k-lV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~----------~~l~~ 346 (541)
++.+++ .++ + +|+++...|++|.+.++++|.++|+++|+++|+||++..+... .....
T Consensus 221 e~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~ 300 (489)
T PLN02483 221 EEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPA 300 (489)
T ss_pred HHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcc
Confidence 776541 112 4 6777778899999999999999999999999999998643211 11123
Q ss_pred CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH---------HHHHHHHHH
Q 009172 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---------HLRVQQQNS 415 (541)
Q Consensus 347 gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~--~~g~~~s~~~a~l~l~~l~tl---------~~r~~~~~~ 415 (541)
++||++.|+||.+++. ||++++++++++.++.... .++..+++..+..+...++.+ ..+.++..+
T Consensus 301 ~~dI~~~SfSKs~g~~----GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~ 376 (489)
T PLN02483 301 DVDIMMGTFTKSFGSC----GGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRE 376 (489)
T ss_pred cCcEEEEecchhcccC----ceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHH
Confidence 5799999999999875 5999999999999886543 234444554444444455422 235567778
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecC
Q 009172 416 TALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 416 na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
+++.+.+.|+++ ++ .+..+ ..+.++++.+.. ......|.+.|...++.+...+. |
T Consensus 377 ~~~~l~~~L~~~-G~-~v~~~----------------~~sp~~~l~l~~-~~~~~~~~~~Ll~~GI~v~~~~f------p 431 (489)
T PLN02483 377 NSNFFRSELQKM-GF-EVLGD----------------NDSPVMPIMLYN-PAKIPAFSRECLKQNVAVVVVGF------P 431 (489)
T ss_pred HHHHHHHHHHHC-CC-cccCC----------------CCCCEEEEEECC-HHHHHHHHHHHHHCCcEEeeeCC------C
Confidence 888889999875 22 12111 023466776643 23445566666555666553111 1
Q ss_pred cccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
+. ....+.+||+++..++++.++.+.++|
T Consensus 432 ~~--------------p~~~~~vRi~isa~~t~edId~~l~~L 460 (489)
T PLN02483 432 AT--------------PLLLARARICISASHSREDLIKALEVI 460 (489)
T ss_pred CC--------------CCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 10 012468999998755444444444444
No 106
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=5.1e-23 Score=217.29 Aligned_cols=282 Identities=15% Similarity=0.197 Sum_probs=191.0
Q ss_pred CCCCchhHHHHHHHHHHHhC--------C-CcEEEeCCHH-HHHHHHHHHhccCCC-EEEEcCCCCcchHHHHHhhcccC
Q 009172 205 GRYGNPTTVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGG-HIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g--------~-~~~i~~sSG~-~Ai~~al~all~~GD-~VIv~~~~y~~~~~~~~~~l~~~ 273 (541)
.+|+.+...+||++||++++ . .+.|++++|+ +++..++.+++.+|| +|+++.|+|.... ..++..
T Consensus 61 ~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~----~~~~~~ 136 (374)
T PRK02610 61 NRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYG----ILAQTL 136 (374)
T ss_pred cCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHH----HHHHHc
Confidence 45666677899999999987 2 2346666665 899888888888886 8999999998755 344556
Q ss_pred CcEEEEeCC------CCHHHHHHhccC---CCeeEEEEeCCCCCCCcccCHHHHHHHHHh-CCCEEEEEcCCCCCCcccc
Q 009172 274 GITATVIDP------ADMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKA 343 (541)
Q Consensus 274 Gi~v~~vd~------~dle~Le~ai~~---~~tklV~lesp~NPtG~v~di~~Ia~la~~-~gillvvDea~a~~~~~~~ 343 (541)
|+++..++. .|++++++++++ +++|+|++++|+||||.+++.+++.++++- +++++|+||+|........
T Consensus 137 g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~ 216 (374)
T PRK02610 137 GIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTL 216 (374)
T ss_pred CCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccch
Confidence 888877753 268899988863 369999999999999999998777666542 4899999999875422111
Q ss_pred ---c-ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHH
Q 009172 344 ---L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNST 416 (541)
Q Consensus 344 ---l-~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l---~tl~~r~~~~~~n 416 (541)
+ ....-+++.|+||.+|.+| +..||+++++++++.+......++ .+.....++...+ +.+..++++..+.
T Consensus 217 ~~~~~~~~~~ivi~SfSK~~g~~G-lRiG~~v~~~~l~~~l~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 293 (374)
T PRK02610 217 VGELAQHPNWVILRTFSKAFRLAA-HRVGYAIGHPELIAVLEKVRLPYN--LPSFSQLAAQLALEHRQELLAAIPEILQE 293 (374)
T ss_pred HHHHhcCCCEEEEEecchhccCcc-cceeeeecCHHHHHHHHHhcCCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 1 1123488999999998776 458899999999998877653333 3433333333333 3333344455555
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCc
Q 009172 417 ALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 417 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa 496 (541)
+..+.+.|+.++.+. + +|. .|+++|++++.+ .....|.+.+...++.+..
T Consensus 294 r~~l~~~L~~~~~~~-~-~p~----------------~g~f~~~~l~~~-~~~~~~~~~l~~~gi~v~~----------- 343 (374)
T PRK02610 294 RDRLYQALQELPQLR-V-WPS----------------AANFLYLRLSQD-AALAALHQALKAQGTLVRH----------- 343 (374)
T ss_pred HHHHHHHHHhCCCcE-e-CCC----------------cceEEEEeCCCC-CCHHHHHHHHHHCCEEEEe-----------
Confidence 666777887665542 2 232 467899998743 2334556665544544321
Q ss_pred ccccccCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHhh
Q 009172 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALHA 540 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~E-d~edli~dL~~AL~~ 540 (541)
.+++||||++.+ +.++.++.|.++|.+
T Consensus 344 -----------------~~~~lRls~~~~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 344 -----------------TGGGLRITIGTPEENQRTLERLQAALTQ 371 (374)
T ss_pred -----------------CCCeEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 136899999953 356666777766654
No 107
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=8.9e-23 Score=211.42 Aligned_cols=283 Identities=20% Similarity=0.175 Sum_probs=199.7
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC----C
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----A 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----~ 283 (541)
+.+..+++++.+++++|.++.+++++|++++.+++.+++++||+|+++++.|....... ......|+++..++. .
T Consensus 30 ~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~ 108 (338)
T cd06502 30 EDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAG-APEFLSGVKLLPVPGENGKL 108 (338)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCC-cHHHHcCceEEeecCCCCcC
Confidence 57889999999999999778899999999999999999999999999999997644211 112235888877764 4
Q ss_pred CHHHHHHhccC------CCeeEEEEeCCCCCCCc--ccCHHHHHHHHHhCCCEEEEEcCCCC------CCcccccccCCc
Q 009172 284 DMEGLEAALNN------NNVSLFFTESPTNPFLR--CVDVKLVSDLCHKKGAIVCIDGTFAT------PLNQKALSLGAD 349 (541)
Q Consensus 284 dle~Le~ai~~------~~tklV~lesp~NPtG~--v~di~~Ia~la~~~gillvvDea~a~------~~~~~~l~~gaD 349 (541)
|+++|++++++ .++++|++++|+||++. ..++++|.++|+++|+++|+|++|.. +........++|
T Consensus 109 d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d 188 (338)
T cd06502 109 TPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVD 188 (338)
T ss_pred CHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCC
Confidence 78999999864 14899999999998442 33567899999999999999998532 111122335789
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCC--ccHHHHHHHHHhHHH--HHHHHHHHHHHHHHHHHHHH
Q 009172 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKT--LHLRVQQQNSTALRMAEILE 425 (541)
Q Consensus 350 ivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~--~s~~~a~l~l~~l~t--l~~r~~~~~~na~~la~~L~ 425 (541)
+++.|+||+++.++ |++++++++++++++.....++.. .++..++.+...++. ...+.++..++++++.+.|+
T Consensus 189 ~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~ 265 (338)
T cd06502 189 SVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALE 265 (338)
T ss_pred EEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998764 456678888988888765544432 344555555555544 44456677778888999998
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC---CCceeecCCCcccceecCccccccc
Q 009172 426 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK---IPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 426 ~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~---~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
+++. . .+| ..++++.+.++++.....++.+.+. ..++.+. +
T Consensus 266 ~~~~--~-~~~----------------~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~----------~------- 309 (338)
T cd06502 266 ELGG--L-ESE----------------VQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFY----------A------- 309 (338)
T ss_pred hcCC--C-ccc----------------ccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEE----------e-------
Confidence 7643 1 122 1467888877643344455555442 1222111 1
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 503 LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
...+.||++++...+++.++.+.++|+.
T Consensus 310 ----------~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 310 ----------WGEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred ----------cCCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 0126899999998778778888877764
No 108
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.92 E-value=1.2e-22 Score=217.09 Aligned_cols=287 Identities=13% Similarity=0.138 Sum_probs=187.6
Q ss_pred CCCCch-hHHHHHHHHHHHhCC-------------CcEEEeCC-HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhh
Q 009172 205 GRYGNP-TTVVVEEKMSALEGA-------------ESTVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV 269 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~g~-------------~~~i~~sS-G~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~ 269 (541)
.+|+++ ...+|+++||++++. ++.|++++ +++++.+++.+++++||+|+++.|+|..... .
T Consensus 69 ~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~----~ 144 (412)
T PTZ00433 69 NGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET----V 144 (412)
T ss_pred CCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH----H
Confidence 456655 478899999998751 23444445 5699999999999999999999999988553 4
Q ss_pred cccCCcEEEEeCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCC
Q 009172 270 LPKMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 270 l~~~Gi~v~~vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~ 339 (541)
++..|+++..++. .|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|++||+|++|....
T Consensus 145 ~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 223 (412)
T PTZ00433 145 CKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMV 223 (412)
T ss_pred HHHcCCEEEEEecCccccCcCCHHHHHHHhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccc
Confidence 4556888777653 268899998877 5999999999999999887 6677888999999999999987543
Q ss_pred ccc----c-cc---cCCcEEEECCccccCCCCCceEEEEEe--C----hHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-
Q 009172 340 NQK----A-LS---LGADLVLHSATKFIGGHNDVLAGSISG--S----GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK- 404 (541)
Q Consensus 340 ~~~----~-l~---~gaDivv~S~sK~lgg~g~v~gG~vv~--~----~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~- 404 (541)
... + .. ....+++.|+||.++.+| ...||+++ + +++++.++..... ....+.....++...+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG-lRlG~~i~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~ 301 (412)
T PTZ00433 224 FNGATFTSVADFDTTVPRVILGGTAKNLVVPG-WRLGWLLLVDPHGNGGDFLDGMKRLGML-VCGPCSVVQAALGEALLN 301 (412)
T ss_pred cCCCCccchhhccCCCceEEEccchhhcCCCC-eeEEEEEEeCCcccHHHHHHHHHHHhhc-cCCCChHHHHHHHHHHhc
Confidence 211 1 11 112478999999998776 45788875 2 3566666654432 22334444433333332
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHHHHHc
Q 009172 405 ----TLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL 476 (541)
Q Consensus 405 ----tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~----~~~~~~~l~~L 476 (541)
.+....++..++.+.+.+.|+++..+. +..| ..|.++|+.++.. .....+|.+.+
T Consensus 302 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p----------------~gg~f~~~~l~~~~~~~~~~~~~~~~~l 364 (412)
T PTZ00433 302 TPQEHLEQIVAKLEEGAMVLYNHIGECIGLS-PTMP----------------RGSMFLMSRLDLEKFRDIKSDVEFYEKL 364 (412)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCC----------------CeeEEEEEEechhhcCCCCCHHHHHHHH
Confidence 233334455567777888887654331 2222 1466789988631 11234566665
Q ss_pred C-CCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHH
Q 009172 477 K-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQAL 538 (541)
Q Consensus 477 ~-~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL~~AL 538 (541)
. ..++.+..|..+. .++++||+++.. +.++-++.|.+++
T Consensus 365 l~~~gV~v~pg~~f~-----------------------~~~~iRis~~~~~e~l~~al~~l~~~~ 406 (412)
T PTZ00433 365 LEEENVQVLPGEIFH-----------------------MPGFTRLTISRPVEVLREAVERIKAFC 406 (412)
T ss_pred HHhcCEEEeCccccC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 3 3577776654321 146899999964 2333444444444
No 109
>PRK08068 transaminase; Reviewed
Probab=99.92 E-value=1.3e-22 Score=215.18 Aligned_cols=284 Identities=15% Similarity=0.096 Sum_probs=187.9
Q ss_pred CCCCC-chhHHHHHHHHHHHh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009172 204 YGRYG-NPTTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 204 Y~R~~-~p~~~~Le~~LA~l~----g~----~-~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~ 273 (541)
+.+|+ .+...+|++++|+++ |. + +.+++++|++++..++.+++++||+|++++|+|..... .++..
T Consensus 63 ~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~----~~~~~ 138 (389)
T PRK08068 63 NHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLS----GVALA 138 (389)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH----HHHhc
Confidence 34553 455788999999886 42 2 34455555689999999999999999999999987653 34456
Q ss_pred CcEEEEeCCC-------CHHHHHHhccCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEEcCCCCCCcc--
Q 009172 274 GITATVIDPA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-- 341 (541)
Q Consensus 274 Gi~v~~vd~~-------dle~Le~ai~~~~tklV~lesp~NPtG~v~di---~~Ia~la~~~gillvvDea~a~~~~~-- 341 (541)
|+++..++.+ |++++++++++ ++++|++++||||||.+++. ++|.++|+++++++|+||+|......
T Consensus 139 g~~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~ 217 (389)
T PRK08068 139 RAQFETMPLIAENNFLPDYTKIPEEVAE-KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQ 217 (389)
T ss_pred CCEEEEeecccccCCCCCHHHHHHhccc-cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCC
Confidence 7777766532 57889888876 58999999999999999996 57777899999999999998543211
Q ss_pred c--c-cc----cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH----HHHHHHH
Q 009172 342 K--A-LS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRV 410 (541)
Q Consensus 342 ~--~-l~----~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l----~tl~~r~ 410 (541)
. + .. ....+++.|+||.+|.+| ...||+++++++++.+......+....++.....+...+ +.+....
T Consensus 218 ~~~s~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 296 (389)
T PRK08068 218 KPVSFLQTPGAKDVGIELYTLSKTFNMAG-WRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELV 296 (389)
T ss_pred CCcChhhCCCccCCEEEEecchhccCCcc-ceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHH
Confidence 1 1 11 124589999999997665 457999999999998887665544443332222222222 2334445
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-CceeecCCCcc
Q 009172 411 QQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCE 489 (541)
Q Consensus 411 ~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~-~~iavS~G~~~ 489 (541)
++..++++.+.+.|+++ ++ .+..| ..|.++++.+++. .....|.+.+.. .++.+..|..+
T Consensus 297 ~~~~~~r~~~~~~L~~~-g~-~~~~~----------------~g~~~~~v~~~~~-~~~~~~~~~l~~~~gi~v~pg~~f 357 (389)
T PRK08068 297 ARYESRRNAFISACREI-GW-EVDAP----------------KGSFFAWMPVPKG-YTSEQFADLLLEKAHVAVAPGNGF 357 (389)
T ss_pred HHHHHHHHHHHHHHHHC-CC-cccCC----------------CeeEEEEEECCCC-CCHHHHHHHHHHhCCEEEecchHh
Confidence 55566777788888775 22 12111 1344579998743 133455555542 46666655332
Q ss_pred cceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009172 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL 534 (541)
.. ..+++|||+++.+ .+.+.+.+
T Consensus 358 ~~---------------------~~~~~iRi~~~~~-~~~l~~al 380 (389)
T PRK08068 358 GE---------------------HGEGYVRVGLLTD-EERLREAV 380 (389)
T ss_pred Cc---------------------cCCCeEEEEEcCC-HHHHHHHH
Confidence 10 1257999999964 34444443
No 110
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.92 E-value=1.1e-22 Score=215.52 Aligned_cols=277 Identities=15% Similarity=0.122 Sum_probs=182.0
Q ss_pred hhHHHHHHHHHHHh----C--C-Cc-EEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 210 PTTVVVEEKMSALE----G--A-ES-TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g--~-~~-~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+...+|+++||+++ | . .+ .|++++|+ +++.+++.+++++||+|++++|+|..... .++..|.++..+
T Consensus 68 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v 143 (388)
T PRK07366 68 HGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAG----GVYLAGGQIYPM 143 (388)
T ss_pred CCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH----HHHhcCCEEEEE
Confidence 44667888888876 4 2 23 57766665 89999999999999999999999988653 344567777776
Q ss_pred CC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEEcCCCCCCccc------cc
Q 009172 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQK------AL 344 (541)
Q Consensus 281 d~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~di---~~Ia~la~~~gillvvDea~a~~~~~~------~l 344 (541)
+. .|++++++.+.+ ++|+|++++||||||.+++. ++|+++|+++|++||+||+|....... ..
T Consensus 144 ~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 222 (388)
T PRK07366 144 PLRAENDFLPVFADIPTEVLA-QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSIL 222 (388)
T ss_pred ECCCccCCCCCHHHHHHhhcc-cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChh
Confidence 43 256778777765 48999999999999999985 467778999999999999987543211 11
Q ss_pred cc----CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH----HHHHHHHHHHHHH
Q 009172 345 SL----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNST 416 (541)
Q Consensus 345 ~~----gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l----~tl~~r~~~~~~n 416 (541)
.. ...+++.|+||.+|.+| ...||+++++++++++.......+..........+...+ +.+....+...++
T Consensus 223 ~~~~~~~~vi~~~SfSK~~g~~G-lRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~ 301 (388)
T PRK07366 223 QADPEKSVSIEFFTLSKSYNMGG-FRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQR 301 (388)
T ss_pred hCCCCcccEEEEeecccccCCcc-hhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 11 12478899999998666 457999999999998887665444332221111112222 2233334455566
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHc-CCCceeecCCCcccceec
Q 009172 417 ALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDAL-KIPYIAPSFGGCESIVDQ 494 (541)
Q Consensus 417 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~-~~~~~~l~~L-~~~~iavS~G~~~sl~~~ 494 (541)
++.+.+.|+++ .+ .+..| ..|.++|+++++.. ....+|.+.+ +..++.+..|..+.
T Consensus 302 r~~l~~~L~~~-~~-~~~~p----------------~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~---- 359 (388)
T PRK07366 302 RDAFINALHQI-GW-PVPLP----------------EATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFG---- 359 (388)
T ss_pred HHHHHHHHHHC-CC-cccCC----------------CeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhC----
Confidence 77777888765 22 12222 25778899987421 1133455444 44566666654321
Q ss_pred CcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHH
Q 009172 495 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKA 532 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~ 532 (541)
+...++|||+++. +.+++.+
T Consensus 360 -----------------~~~~~~iRi~~~~-~~~~l~~ 379 (388)
T PRK07366 360 -----------------KSGEGYVRFALVH-DPDILEE 379 (388)
T ss_pred -----------------cCCCCeEEEEecC-CHHHHHH
Confidence 0124799999985 4444333
No 111
>PRK07337 aminotransferase; Validated
Probab=99.92 E-value=1.2e-22 Score=215.31 Aligned_cols=281 Identities=19% Similarity=0.182 Sum_probs=187.7
Q ss_pred hHHHHHHHHHHHh----CC----CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 211 TTVVVEEKMSALE----GA----ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...+|++++|+++ |. ++.++++++++|+.+++.+++++||+|++++|+|......+ ...|.++..++.
T Consensus 68 g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~ 143 (388)
T PRK07337 68 GLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFV----AAAEGRPVLVPS 143 (388)
T ss_pred CCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEeec
Confidence 4678888888876 32 34555555669999999999999999999999999876443 344666666643
Q ss_pred -------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc----cccccCC
Q 009172 283 -------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLGA 348 (541)
Q Consensus 283 -------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~----~~l~~ga 348 (541)
.|++++++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .....+.
T Consensus 144 ~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 222 (388)
T PRK07337 144 GPAERFQLTAADVEAAWGE-RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGD 222 (388)
T ss_pred CCccCCcCCHHHHHhhcCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccC
Confidence 268999999987 5899999999999999987 568888899999999999998753221 1122333
Q ss_pred c-EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHH
Q 009172 349 D-LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAE 422 (541)
Q Consensus 349 D-ivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~-----tl~~r~~~~~~na~~la~ 422 (541)
+ +++.|+||.++.+|. ..|++++++++++++.......+...+.....++...+. .+....++..++++.+.+
T Consensus 223 ~vi~~~S~SK~~~~~G~-RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~ 301 (388)
T PRK07337 223 DVITINSFSKYFNMTGW-RLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVP 301 (388)
T ss_pred CEEEEEechhhcCCchh-heeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHH
Confidence 3 568899999986663 479999999999888876655544444444443333332 233333445566777778
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHHHHH-cCCCceeecCCCcccceecCcc
Q 009172 423 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDA-LKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 423 ~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~----~~~~~~~l~~-L~~~~iavS~G~~~sl~~~pa~ 497 (541)
.|+++. +.....| ..|.++|++++.. ......|.+. ++..++.+..|..+..
T Consensus 302 ~L~~~~-~~~~~~p----------------~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~------ 358 (388)
T PRK07337 302 ALESLG-FKVPVMP----------------DGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGP------ 358 (388)
T ss_pred HHHhcC-CccccCC----------------CeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCC------
Confidence 887752 2111122 1567899998631 0123445544 3445677766644311
Q ss_pred cccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009172 498 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVL 535 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~ 535 (541)
.-.++++||+++. +.+++.+.++
T Consensus 359 --------------~~~~~~~Ri~~~~-~~~~l~~~l~ 381 (388)
T PRK07337 359 --------------HAPRDYIRLSYAT-SMSRLEEAVA 381 (388)
T ss_pred --------------CCCCCEEEEEecC-CHHHHHHHHH
Confidence 0025799999997 4444444443
No 112
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.92 E-value=3.1e-22 Score=210.91 Aligned_cols=287 Identities=18% Similarity=0.154 Sum_probs=204.8
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCH
Q 009172 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dl 285 (541)
+...+..++++++++++++.++.+++++|++++..++..++++||+|+++++.|+.+... +...|.++..++..|+
T Consensus 80 ~g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~----~~~~g~~~~~~~~~d~ 155 (385)
T PRK05958 80 TGNSPAHEALEEELAEWFGAERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDG----ARLSRARVRRYPHNDV 155 (385)
T ss_pred cCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHH----HHhcCCceEEeCCCCH
Confidence 345678899999999999988899999999888888888899999999999999886643 3345778888887889
Q ss_pred HHHHHhccCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc-c--------ccc-cCCcEEEE
Q 009172 286 EGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K--------ALS-LGADLVLH 353 (541)
Q Consensus 286 e~Le~ai~~~--~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~-~--------~l~-~gaDivv~ 353 (541)
+++++++++. +++++++++++|++|.+.++++|.++|+++|+++|+|++|+.+... . .+. ...++++.
T Consensus 156 ~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~ 235 (385)
T PRK05958 156 DALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVG 235 (385)
T ss_pred HHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEE
Confidence 9999988652 3678888899999999999999999999999999999998654221 0 111 23458899
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCC
Q 009172 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAHP 428 (541)
Q Consensus 354 S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~--~~g~~~s~~~a~l~l~~l~tl---~~r~~~~~~na~~la~~L~~~p 428 (541)
|+||++++. ||++++++++.+.+..... ..+...++..+.++...++.+ ....++..++.+++.+.|++..
T Consensus 236 s~sK~~~~~----Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 311 (385)
T PRK05958 236 TLGKALGSS----GAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG 311 (385)
T ss_pred echhhcccC----CcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999864 4788888888877654322 222334455554444455433 2344566677778888887642
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHH
Q 009172 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
++ + + .+.|++++|.+++ .....+|.+.|...++.+..++...
T Consensus 312 -~~-~-~----------------~~~~~~~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~------------------ 353 (385)
T PRK05958 312 -FQ-L-M----------------DSQSAIQPLIVGD-NERALALAAALQEQGFWVGAIRPPT------------------ 353 (385)
T ss_pred -CC-c-C----------------CCCCCEEEEEeCC-HHHHHHHHHHHHHCCceEecccCCC------------------
Confidence 21 1 1 1246789999864 2445667777766676665432110
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 509 LKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
.....+.||||++...+++.++.+.++|++
T Consensus 354 --~~~~~~~lRis~~~~~~~~~i~~~l~~l~~ 383 (385)
T PRK05958 354 --VPAGTSRLRITLTAAHTEADIDRLLEALAE 383 (385)
T ss_pred --CCCCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence 001246899999977667777777777764
No 113
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.92 E-value=9.2e-23 Score=216.86 Aligned_cols=277 Identities=18% Similarity=0.186 Sum_probs=182.9
Q ss_pred CCCchh-HHHHHHHHHHHh----CC-----CcEEEeCCHH-HHHHHHHHHhccC---CCEEEEcCCCCcchHHHHHhhcc
Q 009172 206 RYGNPT-TVVVEEKMSALE----GA-----ESTVIMASGM-SASTVMLLALVPA---GGHIVTTTDCYRKTRIFIETVLP 271 (541)
Q Consensus 206 R~~~p~-~~~Le~~LA~l~----g~-----~~~i~~sSG~-~Ai~~al~all~~---GD~VIv~~~~y~~~~~~~~~~l~ 271 (541)
+|+.+. ..+|++.||+++ |. ++.|++++|+ +++.+++++++++ ||.|+++.|.|..... .+.
T Consensus 60 ~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~----~~~ 135 (396)
T PRK09147 60 SYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG----AAL 135 (396)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH----HHH
Confidence 344432 466777777754 53 2356666665 9999999999999 9999999999987543 345
Q ss_pred cCCcEEEEeCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc
Q 009172 272 KMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ 341 (541)
Q Consensus 272 ~~Gi~v~~vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~ 341 (541)
..|+++..++. .|++++++.+.+ ++|+|++++|+||||.+++ +++|+++|++|+++||+||+|......
T Consensus 136 ~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~ 214 (396)
T PRK09147 136 LAGAEPYFLNCDPANNFAPDFDAVPAEVWA-RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFD 214 (396)
T ss_pred hcCCEEEEeccCccccCccCHHHHHHHHhh-ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccC
Confidence 56888877753 367888887765 5999999999999999997 667888889999999999998764321
Q ss_pred c---c---c----cc-----CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH--
Q 009172 342 K---A---L----SL-----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-- 404 (541)
Q Consensus 342 ~---~---l----~~-----gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~-- 404 (541)
. + + .. ...+++.|+||.++.+| ...||+++++++++++.......+...+......+...+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~ 293 (396)
T PRK09147 215 EAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPG-LRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWNDE 293 (396)
T ss_pred CCCCCchhhhhccccCccccccEEEEeccccccCCcc-ceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcch
Confidence 1 0 1 11 23489999999887776 4678999999999888776654444555544443333332
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCcee
Q 009172 405 -TLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIA 482 (541)
Q Consensus 405 -tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L-~~~~ia 482 (541)
.+....+...++++.+.+.|.++ + .+..| ..|.++|++++.+ ...|.+.+ +..++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~L~~~--~-~~~~p----------------~~g~f~~~~~~~~---~~~~~~~ll~~~gv~ 351 (396)
T PRK09147 294 AHVRENRALYREKFDAVTPILAPV--L-DVQLP----------------DAGFYLWAKVPGD---DTEFARRLYADYNVT 351 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh--c-CCCCC----------------CeeEEEEEECCCC---HHHHHHHHHHhCCEE
Confidence 23333444555666666777653 1 11122 2577899998722 23444444 345677
Q ss_pred ecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCC
Q 009172 483 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 525 (541)
Q Consensus 483 vS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E 525 (541)
+..|..+..-... ..-..++|||+++..
T Consensus 352 v~pg~~f~~~~~~---------------~~~~~~~iRi~~~~~ 379 (396)
T PRK09147 352 VLPGSYLAREAHG---------------VNPGAGRVRIALVAP 379 (396)
T ss_pred EeCCccccccccC---------------CCCCCCeEEEEecCC
Confidence 7766543210000 001257999999964
No 114
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=1.9e-22 Score=216.87 Aligned_cols=282 Identities=17% Similarity=0.175 Sum_probs=182.6
Q ss_pred CCCc-hhHHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcE
Q 009172 206 RYGN-PTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 206 R~~~-p~~~~Le~~LA~l~g~--------~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
.|+. ....+||+++|++++. +++++++++++|+.+++..++++||+|++++|.|..... .....|++
T Consensus 89 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~----~~~~~g~~ 164 (430)
T PLN00145 89 SYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEA----RAVFSGLE 164 (430)
T ss_pred CCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHH----HHHHcCCE
Confidence 4443 3567899999988742 346666666799999999999999999999999988543 23345777
Q ss_pred EEEeCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc----c
Q 009172 277 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----K 342 (541)
Q Consensus 277 v~~vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~----~ 342 (541)
+++++. .|++++++++++ +++++++++|+||||.+++ +++|.++|+++|++||+|++|...... .
T Consensus 165 ~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~ 243 (430)
T PLN00145 165 VRHFDLLPERGWEVDLEGVEALADE-NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFV 243 (430)
T ss_pred EEEeeCCcccCCcCCHHHHHHHhCc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCcc
Confidence 777652 278999998887 4999999999999999998 778888899999999999998754321 1
Q ss_pred cc----ccCCcEEEECCccccCCCCCceEEEEEe--ChHHHH------HHHHHhhhcCCCccHHHHHHHHHhHH-----H
Q 009172 343 AL----SLGADLVLHSATKFIGGHNDVLAGSISG--SGKLVT------QIRNLHHVLGGALNPNAAYLIIRGMK-----T 405 (541)
Q Consensus 343 ~l----~~gaDivv~S~sK~lgg~g~v~gG~vv~--~~~li~------~l~~~~~~~g~~~s~~~a~l~l~~l~-----t 405 (541)
++ ....-+++.|+||.++.+|. ..||+++ ++.+++ .++.... .....+.+..+++...++ .
T Consensus 244 ~~~~~~~~~~vi~~~S~SK~~~~pG~-RlG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~ 321 (430)
T PLN00145 244 PMGVFGEVAPVLTLGSISKRWVVPGW-RLGWIATCDPNGILKETKVVDSIRNYLN-ISTDPATFVQGAIPQIIANTKEEF 321 (430)
T ss_pred chhhhcccCcEEEEeccccccCCCCe-eEEEEEEecchhhhhhhHHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCHHHH
Confidence 11 11235899999999988874 5778775 334433 2333322 222233444343333332 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHHHHH-cCCCc
Q 009172 406 LHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDA-LKIPY 480 (541)
Q Consensus 406 l~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~----~~~~~~~l~~-L~~~~ 480 (541)
+....++..++++.+.+.|++++.+..+..|. .|..++++++.. ......|+.. ++..+
T Consensus 322 ~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~----------------ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~g 385 (430)
T PLN00145 322 FTKTLGLLKETADICYEKIKEIKCITCPHKPE----------------GSMFVMVKLDLSCLSGIKDDMDFCCKLAKEES 385 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCC----------------eeeEEEeccChhhcCCCCCHHHHHHHHHHhCC
Confidence 34445566677777888887765543222232 466788887521 1112334432 33345
Q ss_pred eeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009172 481 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 481 iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL 534 (541)
+.+..|..+ | .++++|||++. +.+++.+.+
T Consensus 386 V~v~pG~~f----------------------g-~~~~lRis~~~-~~~~l~~al 415 (430)
T PLN00145 386 VVVLPGSAL----------------------G-MKNWLRITFAI-DPPSLEDGL 415 (430)
T ss_pred EEEeCcccc----------------------C-CCCeEEEEeCC-CHHHHHHHH
Confidence 555554321 2 24799999996 444444433
No 115
>PRK07550 hypothetical protein; Provisional
Probab=99.92 E-value=1.2e-22 Score=215.12 Aligned_cols=275 Identities=15% Similarity=0.113 Sum_probs=186.2
Q ss_pred hhHHHHHHHHHHHhC----C---CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 210 PTTVVVEEKMSALEG----A---ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 210 p~~~~Le~~LA~l~g----~---~~~i~~sSG-~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
+...+||++++++++ . .+.|++++| ++|+..++.+++++||+|+++.|+|..... .++..|+++..++
T Consensus 67 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~v~ 142 (386)
T PRK07550 67 EGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKM----WLDMLGIRPVYLP 142 (386)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhcCCEEEEEe
Confidence 346677777776653 2 245666666 589999999999999999999999987653 3456788887776
Q ss_pred CC-------CHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc--cc---cc-
Q 009172 282 PA-------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--KA---LS- 345 (541)
Q Consensus 282 ~~-------dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~--~~---l~- 345 (541)
.+ |++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... .+ ..
T Consensus 143 ~~~~~~~~~~~~~l~~~~~~-~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~ 221 (386)
T PRK07550 143 CDEGPGLLPDPAAAEALITP-RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFAD 221 (386)
T ss_pred cCCCcCCCCCHHHHHHHhcc-cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhC
Confidence 42 67889999987 4899999999999999997 678999999999999999998653211 11 11
Q ss_pred --c-CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH---H-HHHHHHHHHH
Q 009172 346 --L-GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH---L-RVQQQNSTAL 418 (541)
Q Consensus 346 --~-gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~---~-r~~~~~~na~ 418 (541)
. ...+++.|+||.++.+| ...|++++++++++.+.......+...+....+.+...++.++ . ..+...++.+
T Consensus 222 ~~~~~~~i~~~S~SK~~g~~G-~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 300 (386)
T PRK07550 222 PDWDDTLVHLYSFSKSYALTG-HRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRD 300 (386)
T ss_pred CCccccEEEEecchhhccCcc-cceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 1 13478999999998554 3589999999998888876655554455555444444443322 2 2233456667
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCceeecCCCcccceecCcc
Q 009172 419 RMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 419 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~ 497 (541)
.+.+.|.+++.+. + .| ..|.++|+.++.......++.+.| +..++.+..|..+..
T Consensus 301 ~l~~~L~~~~~~~-~-~~----------------~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~------ 356 (386)
T PRK07550 301 AFRAVFARLPGWE-L-LA----------------SGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGP------ 356 (386)
T ss_pred HHHHHHHhCCCce-e-CC----------------CceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCC------
Confidence 7788888764331 1 11 145678888864112344555554 345677766644210
Q ss_pred cccccCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009172 498 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 529 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~ed 529 (541)
..+++|||+++..+.++
T Consensus 357 ---------------~~~~~iRis~~~~~~~~ 373 (386)
T PRK07550 357 ---------------GQEGYLRLAFANADVAG 373 (386)
T ss_pred ---------------CCCCEEEEEeecCCHHH
Confidence 12478999999755443
No 116
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=4e-23 Score=216.43 Aligned_cols=249 Identities=17% Similarity=0.212 Sum_probs=173.1
Q ss_pred CCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~G-D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+.||+++...+|++++|+++|.+ +.|++++|+ +++.+++.+++++| |+|+++.|+|.... ..++..|+++..+
T Consensus 54 ~~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~----~~~~~~g~~v~~v 129 (354)
T PRK04635 54 LNRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA----ISAETFNVGVKAL 129 (354)
T ss_pred hccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEE
Confidence 57788888899999999999963 456666665 99999999999999 89999999997643 3455678888877
Q ss_pred CCC-----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC-CCEEEEEcCCCCCCcccc-c----ccCCc
Q 009172 281 DPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKA-L----SLGAD 349 (541)
Q Consensus 281 d~~-----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~-gillvvDea~a~~~~~~~-l----~~gaD 349 (541)
+.+ |++.++ .+ + ++|+|++++|+||||.+++.+++.++++.. +++||+||+|........ . ....-
T Consensus 130 ~~~~~~~~~~~~l~-~~-~-~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~ 206 (354)
T PRK04635 130 PLTADYQLPLDYIE-QL-D-GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNL 206 (354)
T ss_pred ecCCCCCCCHHHHH-hc-c-CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCE
Confidence 642 567776 34 4 599999999999999999999999998763 799999999865432111 1 11234
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHH
Q 009172 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG-----MKTLHLRVQQQNSTALRMAEIL 424 (541)
Q Consensus 350 ivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~-----l~tl~~r~~~~~~na~~la~~L 424 (541)
+++.|+||+++.+| ...|++++++++++.+......++ .+......+... .+.+..+.++..++++.+.+.|
T Consensus 207 iv~~S~SK~~~l~G-lRlG~~i~~~~~~~~l~~~~~~~~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 283 (354)
T PRK04635 207 VVLRTLSKAFALAG-ARCGFTLANEELIEILMRVIAPYP--VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAAL 283 (354)
T ss_pred EEEechHHHhhhhH-HHHhhhhCCHHHHHHHHhhcCCCC--CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999998555 346899999999988876543332 222222222222 3334445556667778888899
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeec
Q 009172 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 484 (541)
Q Consensus 425 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS 484 (541)
++++.+. + +|. .|+++++.+++ .. .+.+.+...++.+.
T Consensus 284 ~~~~~~~-~-~~~----------------~g~f~~~~~~~-~~---~~~~~l~~~gv~v~ 321 (354)
T PRK04635 284 SMYGGAK-V-LEG----------------NGNYVLAKFDD-VD---AVFKALWDAGIVAR 321 (354)
T ss_pred HhCCCce-E-CCC----------------CCcEEEEECCC-HH---HHHHHHHHCCEEEE
Confidence 8876442 2 222 35688888863 22 33334444455554
No 117
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=2.4e-22 Score=214.61 Aligned_cols=282 Identities=20% Similarity=0.193 Sum_probs=192.7
Q ss_pred hhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHH
Q 009172 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~--~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~ 287 (541)
+...+||++||+++|.++.++++||++|+..++..+.. +||.|+++...|.++.. .++..|.++..++..|.+.
T Consensus 91 ~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~----~~~~~g~~~~~~~~~d~~~ 166 (410)
T PRK13392 91 HPHVLLERELADLHGKESALLFTSGYVSNDAALSTLGKLLPGCVILSDALNHASMIE----GIRRSGAEKQVFRHNDLAD 166 (410)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHH----HHHHcCCeEEEEeCCCHHH
Confidence 36889999999999999999999999998888887754 89988887777776543 3344677777776667766
Q ss_pred HHHhcc---CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc-c--------ccccCCcEEEECC
Q 009172 288 LEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-K--------ALSLGADLVLHSA 355 (541)
Q Consensus 288 Le~ai~---~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~-~--------~l~~gaDivv~S~ 355 (541)
+++.++ ..++++|++++|+||+|.+.|+++|.++|+++|+++|+||+|+.+... . ......|+++.|+
T Consensus 167 l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tl 246 (410)
T PRK13392 167 LEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTL 246 (410)
T ss_pred HHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEC
Confidence 666553 225899999999999999999999999999999999999998744321 1 1112468999999
Q ss_pred ccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHhCCCc
Q 009172 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEILEAHPKV 430 (541)
Q Consensus 356 sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~--~g~~~s~~~a~l~l~~l~t---l~~r~~~~~~na~~la~~L~~~p~v 430 (541)
+|.+|.. ||++++++++++.++..... ++...++..++.+...++. ...+.++..++++++.+.|++. ++
T Consensus 247 sK~~g~~----GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 321 (410)
T PRK13392 247 AKAFGCL----GGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN-GI 321 (410)
T ss_pred hHhhhcc----cchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 9999864 48888999998888765542 2344455555544444443 3334455667778888888764 22
Q ss_pred eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccceecCcccccccCCHHHHH
Q 009172 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 431 ~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
. + +| +.++++.+.++ ......++.+.|. ..++.+..+.. |.. +
T Consensus 322 ~-~-~~----------------~~~~~~~i~~~-~~~~~~~~~~~L~~~~GI~v~~~~~------p~~------~----- 365 (410)
T PRK13392 322 P-V-MP----------------SPSHIVPVMVG-DPTLCKAISDRLMSEHGIYIQPINY------PTV------P----- 365 (410)
T ss_pred C-C-CC----------------CCCCEEEEEeC-CHHHHHHHHHHHHHhCCEEEeeeCC------CCC------C-----
Confidence 1 1 11 13567666664 3234566777663 45666654321 110 0
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 510 KYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
-..+.||+|+....+++.++.+.++|+
T Consensus 366 ---~~~~~lRis~~~~~t~edid~l~~aL~ 392 (410)
T PRK13392 366 ---RGTERLRITPTPLHDDEDIDALVAALV 392 (410)
T ss_pred ---CCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 124689999876555555555555544
No 118
>PLN02656 tyrosine transaminase
Probab=99.91 E-value=2.8e-22 Score=214.14 Aligned_cols=278 Identities=15% Similarity=0.171 Sum_probs=182.0
Q ss_pred hhHHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 210 PTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~--------~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
....+|+++++++++. +++++++++++|+.+++.+++++||+|++++|+|..... .....|+++..++
T Consensus 73 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~i~ 148 (409)
T PLN02656 73 VGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYEL----CAAFRHLEVRYVD 148 (409)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHH----HHHHcCCEEEEEe
Confidence 4567888888888742 345566666699999999999999999999999986432 2334577777765
Q ss_pred C-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc----ccc---
Q 009172 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL--- 344 (541)
Q Consensus 282 ~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~----~~l--- 344 (541)
. .|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|++||+|++|...... .++
T Consensus 149 ~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 227 (409)
T PLN02656 149 LLPEKGWEVDLDAVEALADQ-NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVF 227 (409)
T ss_pred CCCcCCCCCCHHHHHHHhcc-CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHh
Confidence 3 268899998877 4899999999999999975 778899999999999999998754321 111
Q ss_pred -ccCCcEEEECCccccCCCCCceEEEEEeC--------hHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHH
Q 009172 345 -SLGADLVLHSATKFIGGHNDVLAGSISGS--------GKLVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRV 410 (541)
Q Consensus 345 -~~gaDivv~S~sK~lgg~g~v~gG~vv~~--------~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~-----tl~~r~ 410 (541)
.....+++.|+||.|+.+| ...||++++ +++++.+.......+ ..+....+++...++ .+....
T Consensus 228 ~~~~~vi~~~SfSK~f~~pG-lRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~~~~~~~~~~~ 305 (409)
T PLN02656 228 GSIVPVLTLGSLSKRWIVPG-WRLGWFVTTDPSGSFRDPKIVERIKKYFDILG-GPATFIQAAVPTILEQTDESFFKKTI 305 (409)
T ss_pred cccCcEEEEcccchhccCcc-eeEEEEEEeCcccccccHHHHHHHHHHHhhhc-CCCHHHHHHHHHHHhcCcHHHHHHHH
Confidence 1123588999999988776 457888873 477787776544332 234444444444443 233334
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHH-HHHcCCCceeecC
Q 009172 411 QQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKF-IDALKIPYIAPSF 485 (541)
Q Consensus 411 ~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~----~~~~~~~-l~~L~~~~iavS~ 485 (541)
++..+++..+.+.|+.++.+..+..| ..|..+|++++.. ......+ ...+...++.+..
T Consensus 306 ~~~~~~r~~~~~~L~~~~~~~~~~~p----------------~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~p 369 (409)
T PLN02656 306 NILKQSSDICCDRIKEIPCITCPHKP----------------EGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILP 369 (409)
T ss_pred HHHHHHHHHHHHHHhhCCCCcCCcCC----------------CeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEec
Confidence 45556677777888765432111112 1456688888521 0012222 2344445666666
Q ss_pred CCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009172 486 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 486 G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL 534 (541)
|..+ | .++++||+++. +.+++.+.+
T Consensus 370 g~~f----------------------g-~~~~iRi~~~~-~~e~l~eal 394 (409)
T PLN02656 370 GTAV----------------------G-LKNWLRITFAA-DPSSLEEAL 394 (409)
T ss_pred chhc----------------------C-CCCeEEEEeCC-CHHHHHHHH
Confidence 5432 1 14789999996 444443333
No 119
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.91 E-value=7.8e-23 Score=212.29 Aligned_cols=277 Identities=18% Similarity=0.220 Sum_probs=194.8
Q ss_pred CCCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 203 EYGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.|.+|+++...+||+.+++++|.+ +.+++++|+ +++..++. ++.+| .|++++|+|.... ..++..|+++..+
T Consensus 40 ~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~-~l~~g-~vl~~~p~y~~~~----~~~~~~g~~~~~~ 113 (330)
T TIGR01140 40 AWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPR-LLAPG-RVLVLAPTYSEYA----RAWRAAGHEVVEL 113 (330)
T ss_pred HHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHH-HhCCC-eEEEeCCCcHHHH----HHHHHcCCEEEEe
Confidence 467888888899999999999974 567777776 67777554 46778 6999999998754 3456679999888
Q ss_pred CCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcccc-c----ccCCcEEE
Q 009172 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA-L----SLGADLVL 352 (541)
Q Consensus 281 d~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~~-l----~~gaDivv 352 (541)
+ |++++++.++ ++++|++++|+||||.++| +++|+++|+++|+++|+|++|........ . ..+.++++
T Consensus 114 ~--d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~ 189 (330)
T TIGR01140 114 P--DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVL 189 (330)
T ss_pred C--CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEE
Confidence 7 8999999884 3789999999999999999 56777888999999999999875443211 1 12567999
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHhCCC
Q 009172 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEILEAHPK 429 (541)
Q Consensus 353 ~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---l~~r~~~~~~na~~la~~L~~~p~ 429 (541)
.|+||.+|.+| ...|++++++++++.+......+ ..+.....++...++. .....++..++.+.+.+.|++++.
T Consensus 190 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 266 (330)
T TIGR01140 190 RSLTKFFGLAG-LRLGFVVAHPALLARLREALGPW--TVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGG 266 (330)
T ss_pred EecchhhcCch-hhhhheeCCHHHHHHHHhcCCCC--CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999998665 45799999999888887765433 2344444444444432 233345566777888888888764
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHH
Q 009172 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 430 v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
+. + .| +.|.++|+.++.. .+|.+.|...++.+..|..+.
T Consensus 267 ~~-~-~~----------------~~~~f~~~~~~~~----~~l~~~l~~~gi~v~pg~~f~------------------- 305 (330)
T TIGR01140 267 LE-V-VG----------------GTALFLLVRTPDA----AALHEALARRGILIRDFDNFP------------------- 305 (330)
T ss_pred ce-E-CC----------------CCCeEEEEEcCCH----HHHHHHHHHCCEEEEECCCCC-------------------
Confidence 32 1 22 1467889888642 345555554566666654421
Q ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 510 KYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
+...++|||+++..+ + . +.|..+|
T Consensus 306 --~~~~~~iRi~~~~~~-~-~-~~~~~~l 329 (330)
T TIGR01140 306 --GLDPRYLRFALPTDE-E-N-DRLEEAL 329 (330)
T ss_pred --CCCCCEEEEEecCHH-H-H-HHHHHhh
Confidence 123569999999644 2 2 5666555
No 120
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.1e-22 Score=214.37 Aligned_cols=285 Identities=17% Similarity=0.264 Sum_probs=192.3
Q ss_pred CCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC-
Q 009172 206 RYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~- 282 (541)
+|+.+....||++||++++.+ +.|++++|+ +++..++..++++||+|++++|+|+.....+ ...|.++..++.
T Consensus 63 ~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~----~~~g~~~~~vp~~ 138 (369)
T PRK08153 63 KYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHV----AGFGGRLVTVPYR 138 (369)
T ss_pred cCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHH----HHcCCeEEEeeCC
Confidence 355556789999999999863 566666766 8899999999999999999999998755333 335666666643
Q ss_pred ---CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEEcCCCCCCccc---cc--ccCCcEEE
Q 009172 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQK---AL--SLGADLVL 352 (541)
Q Consensus 283 ---~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~--~gillvvDea~a~~~~~~---~l--~~gaDivv 352 (541)
.|++++++.+...++++|++++|+||||.+.+.+++.++++. ++++||+||+|....... ++ .....+++
T Consensus 139 ~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~ 218 (369)
T PRK08153 139 DDREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRM 218 (369)
T ss_pred CCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEE
Confidence 367888776654468999999999999999998887777764 389999999986543211 11 11234889
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHhCCC
Q 009172 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEILEAHPK 429 (541)
Q Consensus 353 ~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---l~~r~~~~~~na~~la~~L~~~p~ 429 (541)
.|+||.+|.+| +..||+++++++++.+......+ ..++...+++...++. +....+...++.+.+.+.|++++
T Consensus 219 ~SfSK~~g~~G-lRiG~~v~~~~~~~~l~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g- 294 (369)
T PRK08153 219 RTFSKAYGLAG-ARVGYAIGAPGTIKAFDKVRNHF--GMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANG- 294 (369)
T ss_pred ecchHhccCcc-hheeeeecCHHHHHHHHHhhcCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-
Confidence 99999998555 35789999999998887765443 3455555555555532 22233344466666777777542
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHH
Q 009172 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 430 v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
+. .+| ..|+++++.++.+.+.+..+++.+...|+.+...+.
T Consensus 295 ~~--~~p----------------~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~--------------------- 335 (369)
T PRK08153 295 LT--PLP----------------SATNFVAIDCGRDGAFARAVLDGLIARDIFVRMPGV--------------------- 335 (369)
T ss_pred Cc--cCC----------------CcCcEEEEECCCCcccHHHHHHHHHHCCeEEeeCCC---------------------
Confidence 21 122 146788888753224466777777655665531110
Q ss_pred hcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009172 510 KYGIMDNLVRFSFGV-EDFEDLKADVLQALH 539 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~-Ed~edli~dL~~AL~ 539 (541)
+-.++++|+|++. ++.+.+++.|.+.+.
T Consensus 336 --~~~~~~iRis~~~~~~~~~~~~al~~~~~ 364 (369)
T PRK08153 336 --APLDRCIRVSCGPDEELDLFAEALPEALE 364 (369)
T ss_pred --CCCCCeEEEecCCHHHHHHHHHHHHHHHH
Confidence 0024699999995 355666666666654
No 121
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=3e-23 Score=218.48 Aligned_cols=275 Identities=15% Similarity=0.194 Sum_probs=192.8
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
++|+++...+|++.||+++|.+ +.|++++|+ +++.+++.+++++||+|++++|+|..... .+...|+++..++.
T Consensus 59 ~~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~----~~~~~g~~v~~v~~ 134 (366)
T PRK01533 59 ALYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRH----HAIIEGCEVKEVAL 134 (366)
T ss_pred CcCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHH----HHHHcCCEEEEeec
Confidence 3567777889999999999873 566666665 89999999999999999999999987553 34556888877754
Q ss_pred ----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHH---hCCCEEEEEcCCCCCCcc----cc---c-ccC
Q 009172 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH---KKGAIVCIDGTFATPLNQ----KA---L-SLG 347 (541)
Q Consensus 283 ----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~---~~gillvvDea~a~~~~~----~~---l-~~g 347 (541)
.|+++|++++++ ++++|++++||||||.+++.+++.++++ +++ ++|+||+|...... .. . ..+
T Consensus 135 ~~~~~d~~~l~~~~~~-~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~ 212 (366)
T PRK01533 135 NNGVYDLDEISSVVDN-DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHK 212 (366)
T ss_pred CCCCcCHHHHHHHhCc-CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCC
Confidence 378999999876 5899999999999999999776666654 444 67889997643211 11 1 223
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHH
Q 009172 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEIL 424 (541)
Q Consensus 348 aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---l~~r~~~~~~na~~la~~L 424 (541)
..+++.|+||.++.+|. ..||+++++++++.++..... ...+.....++...++. +....+...++.+++.+.|
T Consensus 213 ~vi~~~SfSK~~~l~Gl-RiG~~i~~~~~~~~l~~~~~~--~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l 289 (366)
T PRK01533 213 NILVLRTFSKAYGLASF-RVGYAVGHEELIEKLNVVRLP--FNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFC 289 (366)
T ss_pred CEEEEeCchHHhcChHH-HHhHHhCCHHHHHHHHHhcCC--CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999986663 478999999999988876532 34555555555545432 2233344445666677777
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCC
Q 009172 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 504 (541)
Q Consensus 425 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~ 504 (541)
+.+ ++. + +| ..|+++++.+++ ...+.+.|...|+.+..
T Consensus 290 ~~~-g~~-~-~~----------------~~~nf~~~~~~~----~~~~~~~l~~~GI~Vr~------------------- 327 (366)
T PRK01533 290 KEN-EIP-F-YQ----------------SQTNFIFLPVEN----GGEIYEACAHAGFIIRP------------------- 327 (366)
T ss_pred HhC-CCc-c-CC----------------CcCcEEEEeCCC----HHHHHHHHHHCCcEEcc-------------------
Confidence 654 221 1 11 257899999853 23455655555655441
Q ss_pred HHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009172 505 QSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 539 (541)
Q Consensus 505 ~~~~~~~gi~~~~IRlSvG~-Ed~edli~dL~~AL~ 539 (541)
. +++||||+|. |+.+.+++.|++.++
T Consensus 328 --------~-~~~iRis~~~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 328 --------F-PNGVRITVGTREQNEGVISVLQQHFE 354 (366)
T ss_pred --------C-CCceEEeCCCHHHHHHHHHHHHHHHH
Confidence 0 2579999996 467888888887765
No 122
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.91 E-value=3.3e-22 Score=213.67 Aligned_cols=283 Identities=14% Similarity=0.114 Sum_probs=179.3
Q ss_pred hhHHHHHHHHHHHhC------C-CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 210 PTTVVVEEKMSALEG------A-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 210 p~~~~Le~~LA~l~g------~-~~~i~~sSG-~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
....+|+++||++++ . .+.|++++| ++++.+++.+++++||+|+++.|+|..... .+...|+++..++
T Consensus 74 ~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~----~~~~~g~~~~~~~ 149 (409)
T PLN00143 74 GGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVET----YAIFHHLEIRHFD 149 (409)
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHH----HHHHcCCEEEEEe
Confidence 456678888888873 1 234444555 599999999999999999999999988653 3344577776664
Q ss_pred C-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc----ccc---
Q 009172 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL--- 344 (541)
Q Consensus 282 ~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~----~~l--- 344 (541)
. .|+++|++++++ +++++++++||||||.+++ +++|+++|+++++++|+||+|...... .++
T Consensus 150 ~~~~~~~~~d~~~l~~~~~~-~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~ 228 (409)
T PLN00143 150 LLPEKGWEVDLDAVEAIADE-NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLF 228 (409)
T ss_pred ccCCCCCcCCHHHHHHhccc-CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhh
Confidence 2 278999998876 4899999999999999998 667888899999999999998754321 111
Q ss_pred -ccCCcEEEECCccccCCCCCceEEEEEe-Ch-HHH------HHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHH
Q 009172 345 -SLGADLVLHSATKFIGGHNDVLAGSISG-SG-KLV------TQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRV 410 (541)
Q Consensus 345 -~~gaDivv~S~sK~lgg~g~v~gG~vv~-~~-~li------~~l~~~~~~~g~~~s~~~a~l~l~~l~-----tl~~r~ 410 (541)
....-+++.|+||.|+.+|. ..||+++ ++ .++ +.+........ ..+.....++...++ .+....
T Consensus 229 ~~~~~vi~~~SfSK~f~~pGl-RvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~q~a~~~~l~~~~~~~~~~~~ 306 (409)
T PLN00143 229 ASIVPVITLGSISKRWMIPGW-GLGWLVTCDPSGLLQICEIADSIKKALNPAP-FPPTFIQAAIPEILEKTTEDFFSKTI 306 (409)
T ss_pred cccCcEEEEccchhhcCCCcc-ceEEEEeeCchhhhhhHHHHHHHHHHHhccC-CCCchHHHHHHHHHhcChHHHHHHHH
Confidence 11234899999999887774 5788887 33 333 23333322111 123333333333332 345555
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC----CHHHHHHHHH-HcCCCceeecC
Q 009172 411 QQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----DLTATIKFID-ALKIPYIAPSF 485 (541)
Q Consensus 411 ~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g----~~~~~~~~l~-~L~~~~iavS~ 485 (541)
++..++.+.+.+.|.+++... ++ +.| ..|.++|++++. +......++. .++..++.+..
T Consensus 307 ~~~~~~~~~~~~~L~~~~~~~---~~---~~p----------~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~p 370 (409)
T PLN00143 307 NILRAALAFCYDKLKEIPCIM---CP---QKA----------EGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILP 370 (409)
T ss_pred HHHHHHHHHHHHHHhcCCCCC---CC---CCC----------CeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeC
Confidence 666667777777777654321 11 111 257788999862 1111233433 33455777766
Q ss_pred CCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHH
Q 009172 486 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQAL 538 (541)
Q Consensus 486 G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL~~AL 538 (541)
|..+ | .++++||+++.. +.++-++.|.++|
T Consensus 371 g~~f----------------------~-~~~~iRi~~~~~~~~l~~al~rl~~~l 402 (409)
T PLN00143 371 GVTV----------------------G-LKNWLRITFAVEQSSLEDGLGRLKSFC 402 (409)
T ss_pred cccc----------------------C-CCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 6432 1 247899999963 2333444444444
No 123
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.4e-22 Score=211.66 Aligned_cols=281 Identities=17% Similarity=0.185 Sum_probs=189.3
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCC-HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 205 GRYGNPTTVVVEEKMSALEGAE-STVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~~-~~i~~sS-G~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+++...+|+++||++++.+ +.|++++ +++++.+++++++++||+|++++|+|..... ..+..|+++..++.
T Consensus 55 ~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~v~~ 130 (353)
T PRK05387 55 RLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPV----YAGLYGIPYEEIPL 130 (353)
T ss_pred hcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHH----HHHHcCCEEEEeec
Confidence 4566667789999999999863 3455555 4599999999999999999999999966442 34556777777653
Q ss_pred -----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC-CCEEEEEcCCCCCCcccc--c--ccCCcEEE
Q 009172 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQKA--L--SLGADLVL 352 (541)
Q Consensus 283 -----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~-gillvvDea~a~~~~~~~--l--~~gaDivv 352 (541)
.|++++++ ++++|++++|+||||.+++.+++.++++.+ ++++|+||+|........ . ....++++
T Consensus 131 ~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~ 205 (353)
T PRK05387 131 DDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVV 205 (353)
T ss_pred CCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEE
Confidence 25666652 257899999999999999999999999875 999999999864321111 1 22456999
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcC-CCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCC
Q 009172 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAHP 428 (541)
Q Consensus 353 ~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g-~~~s~~~a~l~l~~l~---tl~~r~~~~~~na~~la~~L~~~p 428 (541)
.|+||.++.+| +..|++++++++++.++....... .+.+....+.+...++ .+....++..++++.+.+.|+++
T Consensus 206 ~S~SK~~~~~G-lR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~- 283 (353)
T PRK05387 206 QTFSKSRSLAG-LRVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL- 283 (353)
T ss_pred EehhHhhcchh-hhceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 99999998555 357899999999998887654332 2344444444433442 34444555667778888888876
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHH
Q 009172 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
++. + +|. .|+++++.+++ ....+|.+.|...++.+... ..+
T Consensus 284 g~~-~-~~~----------------~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~~------~~~------------- 324 (353)
T PRK05387 284 GFE-V-LPS----------------KANFVFARHPS--HDAAELAAKLRERGIIVRHF------NKP------------- 324 (353)
T ss_pred CCe-E-CCC----------------cCcEEEEECCC--CCHHHHHHHHHHCCEEEEEC------CCC-------------
Confidence 332 2 231 35688888764 12345555555445554310 000
Q ss_pred HhcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009172 509 LKYGIMDNLVRFSFGVE-DFEDLKADVLQALH 539 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~E-d~edli~dL~~AL~ 539 (541)
+ .+++||||++.+ +.+.+++.|.+++.
T Consensus 325 ---~-~~~~iRis~~~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 325 ---R-IDQFLRITIGTDEEMEALVDALKEILA 352 (353)
T ss_pred ---C-CCCeEEEEeCCHHHHHHHHHHHHHHhh
Confidence 0 247899999853 44566666666554
No 124
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.91 E-value=3e-22 Score=213.26 Aligned_cols=286 Identities=14% Similarity=0.133 Sum_probs=186.9
Q ss_pred CchhHHHHHHHHHHHhC-----C--CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 208 GNPTTVVVEEKMSALEG-----A--ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g-----~--~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+.+...+|++++|++++ . +++++++++++++.+++.+++++||+|++++|+|.... ..++..|+++..+
T Consensus 71 ~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~----~~~~~~g~~v~~~ 146 (401)
T TIGR01264 71 PTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE----TLAESMGIEVKLY 146 (401)
T ss_pred CCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH----HHHHHcCCEEEEe
Confidence 34566789999999886 2 34555555669999999999999999999999998754 3445668887776
Q ss_pred CC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc----ccc-c
Q 009172 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL-S 345 (541)
Q Consensus 281 d~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~----~~l-~ 345 (541)
+. .|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .++ .
T Consensus 147 ~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 225 (401)
T TIGR01264 147 NLLPDKSWEIDLKQLESLIDE-KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLAS 225 (401)
T ss_pred ecCCccCCCCCHHHHHHHhcc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHH
Confidence 42 368999998876 4899999999999999987 778888999999999999998754321 111 1
Q ss_pred c---CCcEEEECCccccCCCCCceEEEEEeCh------HHHHHHHHHhhhcCCCccHHHHHHHHHhH-----HHHHHHHH
Q 009172 346 L---GADLVLHSATKFIGGHNDVLAGSISGSG------KLVTQIRNLHHVLGGALNPNAAYLIIRGM-----KTLHLRVQ 411 (541)
Q Consensus 346 ~---gaDivv~S~sK~lgg~g~v~gG~vv~~~------~li~~l~~~~~~~g~~~s~~~a~l~l~~l-----~tl~~r~~ 411 (541)
+ ...+++.|+||.++.+| ...||+++++ ++++.++..... ....+.....++...+ +.+....+
T Consensus 226 ~~~~~~vi~~~SfSK~~~~~G-lRiG~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~l~~~~~ 303 (401)
T TIGR01264 226 LSSTVPILSCGGLAKRWLVPG-WRLGWIIIHDRRGILRDIRDGLVKLSQR-ILGPCTIVQGALPSILLRTPQEYFDGTLS 303 (401)
T ss_pred cCCCCcEEEEccCcccCCCcc-ceEEEEEecCcchhHHHHHHHHHHHhhc-cCCCCcHHHHHHHHHHHhCcHHHHHHHHH
Confidence 1 12478999999987776 4578888763 344444443321 1122333333333333 22333445
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHHHHHc-CCCceeecCC
Q 009172 412 QQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDAL-KIPYIAPSFG 486 (541)
Q Consensus 412 ~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~----~~~~~~~l~~L-~~~~iavS~G 486 (541)
+..++.+.+.+.|++++++. +..| ..|.++|++++.. ......+.+.+ +..++.+..|
T Consensus 304 ~~~~~r~~l~~~L~~~~~~~-~~~p----------------~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg 366 (401)
T TIGR01264 304 VLESNAMLCYGALAAVPGLR-PVMP----------------SGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPG 366 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCc-ccCC----------------CeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCc
Confidence 55667777888888765432 2222 2577889987521 01234455554 3457766665
Q ss_pred CcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009172 487 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 540 (541)
Q Consensus 487 ~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL~~AL~~ 540 (541)
+.+. .++++|||++.. +.++.++.|.+.+++
T Consensus 367 ~~f~-----------------------~~~~iRis~~~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 367 SCFE-----------------------YPGFFRVVLTVPVVMMEEACSRIQEFCER 399 (401)
T ss_pred hhcC-----------------------CCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 4321 147899999963 334455555555543
No 125
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.91 E-value=1.5e-22 Score=213.30 Aligned_cols=298 Identities=23% Similarity=0.251 Sum_probs=210.2
Q ss_pred CCCCCCCchhHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHhhcccCCc
Q 009172 202 FEYGRYGNPTTVVVEEKMSALEGAES---TVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~~~---~i~~sSG~~Ai~~al~al---l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
+.+++......+++++.+++++|++. .++++|++.+++.++.++ +++||+|++....|++....+....++.|+
T Consensus 35 ~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~ 114 (371)
T PF00266_consen 35 SHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGA 114 (371)
T ss_dssp STTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTE
T ss_pred cchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchh
Confidence 34444456778899999999999854 566777779999999998 799999999999999988778777778899
Q ss_pred EEEEeCC-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCc
Q 009172 276 TATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGAD 349 (541)
Q Consensus 276 ~v~~vd~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaD 349 (541)
++++++. .|+++++++|++ ++++|++.+..|.+|...|+++|.++||++|+++++|.+++.+. ..+..++|+|
T Consensus 115 ~v~~i~~~~~~~~~~~~~~~~l~~-~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D 193 (371)
T PF00266_consen 115 EVRVIPADPGGSLDLEDLEEALNP-DTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELGAD 193 (371)
T ss_dssp EEEEEEEGTTSSCSHHHHHHHHHT-TESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTES
T ss_pred hhccccccccchhhhhhhhhhhcc-ccceEEeecccccccEEeeeceehhhhhccCCceeEechhccccccccccccccc
Confidence 9888753 379999999987 59999999999999999999999999999999999999987654 4566678999
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh---------------------hcCCCccHHHHHHHHHhHHHH--
Q 009172 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKTL-- 406 (541)
Q Consensus 350 ivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~---------------------~~g~~~s~~~a~l~l~~l~tl-- 406 (541)
+++.|.+|++||+| .|+++.+++++++++.... ..+++.+....+.+..+++.+
T Consensus 194 ~~~~s~~Kl~gp~G---~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~ 270 (371)
T PF00266_consen 194 FLVFSSHKLGGPPG---LGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEE 270 (371)
T ss_dssp EEEEESTSTTSSST---EEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHH
T ss_pred eeeecccccCCCCc---hhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhc
Confidence 99999999556555 6889999888887742111 112344433333333333332
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCcee
Q 009172 407 ---HLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIA 482 (541)
Q Consensus 407 ---~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-~~~~~~~l~~L~~~~ia 482 (541)
+...++..+.++++.+.|++.+.+. +.-|.- + ...+++++|.+++. .....+ .|...+|.
T Consensus 271 ~g~~~i~~~~~~l~~~~~~~l~~~~~~~-~~~~~~---~---------~~~~~i~~~~~~~~~~~~~~~---~L~~~~I~ 334 (371)
T PF00266_consen 271 IGIERIRERIRELAEYLREALEELPGIE-VLGPDD---E---------PRRPSIVSFNLPGSDADDVVK---YLEERGIA 334 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTEE-ESSSSC---G---------GBGTTEEEEEETTSSHHHHHH---HHHHHTEE
T ss_pred cccccchhhhhhHHHHHHhhhhcCCcee-Eeeecc---c---------ccccceEEEeecCCCHHHHHH---HHhhcCEE
Confidence 2234556677888888888888754 322211 1 12578999999752 333334 44334677
Q ss_pred ecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009172 483 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 483 vS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL 534 (541)
++.|....- | .....+. ++.||+|++..++++.++.|
T Consensus 335 ~~~G~~~~~---~-----------~~~~~~~-~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 335 VSTGSACAG---P-----------SLDILGM-GGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEESTTTCH---H-----------HHHHHHT-TTEEEEE-GTTSSHHHHHHH
T ss_pred EeccCcccH---H-----------HHHHhCC-CCEEEEeccCCCCHHHHhhC
Confidence 777644320 1 0111122 28999999999998887764
No 126
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.91 E-value=6.2e-22 Score=211.07 Aligned_cols=270 Identities=16% Similarity=0.155 Sum_probs=182.4
Q ss_pred chhHHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 209 NPTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~--------~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.....++++.++++++. ++.+++++|++|+.+++.+++++||+|+++.|+|.... ..+...|+++..+
T Consensus 72 ~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~ 147 (403)
T TIGR01265 72 SVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYD----TRAAFSGLEVRLY 147 (403)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHHcCCEEEEe
Confidence 45577899999999873 34666666679999999999999999999999998644 3345567887776
Q ss_pred CC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc----c-cc
Q 009172 281 DP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A-LS 345 (541)
Q Consensus 281 d~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~----~-l~ 345 (541)
+. .|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... + ..
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 226 (403)
T TIGR01265 148 DLLPEKDWEIDLDGLEALADE-KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMAS 226 (403)
T ss_pred cCCcccCCccCHHHHHHHhCc-CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhh
Confidence 42 368999998877 4899999999999999987 7889999999999999999987543211 1 11
Q ss_pred c---CCcEEEECCccccCCCCCceEEEEEeC-h-H-----HHHHHHHHhhhcCCCccHHHHHHHHHhHH-----HHHHHH
Q 009172 346 L---GADLVLHSATKFIGGHNDVLAGSISGS-G-K-----LVTQIRNLHHVLGGALNPNAAYLIIRGMK-----TLHLRV 410 (541)
Q Consensus 346 ~---gaDivv~S~sK~lgg~g~v~gG~vv~~-~-~-----li~~l~~~~~~~g~~~s~~~a~l~l~~l~-----tl~~r~ 410 (541)
+ ..-+++.|+||.++.+|. ..|+++++ + + +++.+...... ....+......+...++ .+....
T Consensus 227 ~~~~~~vi~~~S~SK~~~~pGl-RiG~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 304 (403)
T TIGR01265 227 FASIVPVLSLGGISKRWVVPGW-RLGWIIIHDPHGIFRDTVLQGLKNLLQR-ILGPATIVQGALPDILENTPQEFFDGKI 304 (403)
T ss_pred hccCCcEEEEeecccccCCCcc-eEEEEEEeCchhhhHHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHhChHHHHHHHH
Confidence 1 124788999999887764 56777763 2 2 33334333221 12234444333333332 334445
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH----HHHHHHHHHc-CCCceeecC
Q 009172 411 QQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL----TATIKFIDAL-KIPYIAPSF 485 (541)
Q Consensus 411 ~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~----~~~~~~l~~L-~~~~iavS~ 485 (541)
++..+++..+.+.|+.++++. +..|. .|.++|++++... .....+.+.+ +..++.+..
T Consensus 305 ~~~~~~~~~l~~~L~~~~~~~-~~~p~----------------~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~p 367 (403)
T TIGR01265 305 SVLKSNAELCYEELKDIPGLV-CPKPE----------------GAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLP 367 (403)
T ss_pred HHHHHHHHHHHHHHhcCCCce-ecCCC----------------ceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeC
Confidence 566677788888888766542 22232 5778899986320 1234555553 445766666
Q ss_pred CCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCC
Q 009172 486 GGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE 525 (541)
Q Consensus 486 G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E 525 (541)
|..+ + .+++|||+++.+
T Consensus 368 g~~f----------------------~-~~~~iRis~~~~ 384 (403)
T TIGR01265 368 GSAF----------------------G-LPNWVRITITVP 384 (403)
T ss_pred cccc----------------------C-CCCeEEEEecCC
Confidence 6432 1 147899999964
No 127
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.91 E-value=3.4e-22 Score=208.97 Aligned_cols=288 Identities=17% Similarity=0.139 Sum_probs=195.9
Q ss_pred hhHHHHHHHHHHHhCCC--c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC----
Q 009172 210 PTTVVVEEKMSALEGAE--S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~--~-~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
...+++++.+++++|.+ + .++++||++|+..++.+++++||+|+++.+.|.+.. +...++..|.++++++.
T Consensus 32 ~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 109 (356)
T cd06451 32 ALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDR--WADMAERYGADVDVVEKPWGE 109 (356)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHH--HHHHHHHhCCCeEEeecCCCC
Confidence 44789999999999973 3 456777899999999999999999999988877631 22345567888777753
Q ss_pred -CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEEEECCccccC
Q 009172 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIG 360 (541)
Q Consensus 283 -~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDivv~S~sK~lg 360 (541)
.|+++++++++++++++|++++|+||+|.+.|+++|.++|+++|+++++|++++.+ ...+....++|+++.|+||+++
T Consensus 110 ~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~ 189 (356)
T cd06451 110 AVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALG 189 (356)
T ss_pred CCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhcc
Confidence 37899999997645999999999999999999999999999999999999997643 2344445689999999999999
Q ss_pred CCCCceEEEEEeChHHHHHHHH---Hhh----------------hcCCCccHHHHHHHHHhHHH-----HHHHHHHHHHH
Q 009172 361 GHNDVLAGSISGSGKLVTQIRN---LHH----------------VLGGALNPNAAYLIIRGMKT-----LHLRVQQQNST 416 (541)
Q Consensus 361 g~g~v~gG~vv~~~~li~~l~~---~~~----------------~~g~~~s~~~a~l~l~~l~t-----l~~r~~~~~~n 416 (541)
++.+ .|+++.++++++.+.. ... ..+++.++...+.+..+++. +....++..++
T Consensus 190 ~p~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~ 267 (356)
T cd06451 190 APPG--LGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRL 267 (356)
T ss_pred CCCC--cceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 7642 5899999888877653 000 11222333332323333333 22334455567
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-ceeecCCCcccceecC
Q 009172 417 ALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-YIAPSFGGCESIVDQP 495 (541)
Q Consensus 417 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~-~iavS~G~~~sl~~~p 495 (541)
+.++.+.|++. .+. +..+ +. ...+.++++.++.+ .....+.+.|... ++.++.|.. +
T Consensus 268 ~~~l~~~L~~~-g~~-~~~~--~~-----------~~~~~~~~~~~~~~-~~~~~~~~~L~~~~gI~~~~g~~------~ 325 (356)
T cd06451 268 AKALREGLEAL-GLK-LLAK--PE-----------LRSPTVTAVLVPEG-VDGDEVVRRLMKRYNIEIAGGLG------P 325 (356)
T ss_pred HHHHHHHHHHc-CCe-eccC--cc-----------cCCCceEEEECCCC-CCHHHHHHHHHHhCCEEEecccc------c
Confidence 77778888764 332 2111 00 01234556666532 2344566666554 665554421 0
Q ss_pred cccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
...+.||+|++..++++.++.+.++|.+
T Consensus 326 -----------------~~~~~iRis~~~~~~~e~v~~~~~~l~~ 353 (356)
T cd06451 326 -----------------TAGKVFRIGHMGEATREDVLGVLSALEE 353 (356)
T ss_pred -----------------ccCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 0246899999987777777777777764
No 128
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.91 E-value=1.3e-21 Score=198.23 Aligned_cols=313 Identities=20% Similarity=0.202 Sum_probs=216.3
Q ss_pred cccCChHHHHHHHh--cccCCCCCCCCCc-hhHHHHHHHHHHHhCC---CcEEEeCCHH-HHHHHHHHHhccCCCEEEEc
Q 009172 183 YFFKKTAELIDFKE--KRRASFEYGRYGN-PTTVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALVPAGGHIVTT 255 (541)
Q Consensus 183 ~~~~~~~~~~~~~~--~~~~~~~Y~R~~~-p~~~~Le~~LA~l~g~---~~~i~~sSG~-~Ai~~al~all~~GD~VIv~ 255 (541)
..|+.+..+.+... ..++.|.|+ +.+ ....++.+...+.++. ++.++++.|. -++..+++.+.++||.|++.
T Consensus 35 MDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~ 113 (388)
T COG1168 35 MDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQ 113 (388)
T ss_pred ccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEec
Confidence 45555555444332 246779999 554 4788889999988875 3566666665 99999999999999999999
Q ss_pred CCCCcchHHHHHhhcccCCcEEEEeCC--------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHh
Q 009172 256 TDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK 324 (541)
Q Consensus 256 ~~~y~~~~~~~~~~l~~~Gi~v~~vd~--------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~ 324 (541)
.|.|++.+..+ +..|-++...+. .|.++||+++.+.++|+.++|+|+||+|++.. +.+|.+||.+
T Consensus 114 tPvY~PF~~~i----~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~k 189 (388)
T COG1168 114 TPVYPPFYNAI----KLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLR 189 (388)
T ss_pred CCCchHHHHHH----hhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHH
Confidence 99999977554 334555554432 28999999998766899999999999999986 7788999999
Q ss_pred CCCEEEEEcCCCCCCccc----c---c-cc--CCcEEEECCccccCCCCCceEEEEEeChHHHHHH-HHHhhhcCCCccH
Q 009172 325 KGAIVCIDGTFATPLNQK----A---L-SL--GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI-RNLHHVLGGALNP 393 (541)
Q Consensus 325 ~gillvvDea~a~~~~~~----~---l-~~--gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l-~~~~~~~g~~~s~ 393 (541)
||++||.||.++..+... + + .. ..-+++.|.||.|+-.|...+-+++.++++.++. ++........++.
T Consensus 190 h~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~ 269 (388)
T COG1168 190 HGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSA 269 (388)
T ss_pred cCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCch
Confidence 999999999977643321 1 1 11 2237888999999977644445666777765443 3333333344444
Q ss_pred HHHHHH----HHhHHHHHHHHHHHHHHHHHHHHHHHhC-CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC---C
Q 009172 394 NAAYLI----IRGMKTLHLRVQQQNSTALRMAEILEAH-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---D 465 (541)
Q Consensus 394 ~~a~l~----l~~l~tl~~r~~~~~~na~~la~~L~~~-p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g---~ 465 (541)
+...+. ..|-..|+.-.+-...|...+.+.|.++ |+|+ +.-|. +..++|+++.. +
T Consensus 270 lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~-v~~p~----------------gTYL~WLD~r~l~l~ 332 (388)
T COG1168 270 LGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVK-VTEPQ----------------GTYLAWLDCRELGLD 332 (388)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EecCC----------------CceeeeeeccccCCC
Confidence 332222 2344567777777889999999999876 6764 33332 34688998863 2
Q ss_pred HHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009172 466 LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 540 (541)
Q Consensus 466 ~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL~~AL~~ 540 (541)
....++++. ...+++++.|..+.- -..|++|+.++.. ..++-++.|.++|+.
T Consensus 333 d~~l~~~ll--~~akVal~~G~~FG~---------------------~g~gf~RlN~acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 333 DSELAEFLL--EEAKVALSPGSTFGE---------------------EGSGFVRLNFACPRAILEEALERLKRALKK 386 (388)
T ss_pred hHHHHHHHH--HhhcEeccCCCccCc---------------------CCCceEEEecCCCHHHHHHHHHHHHHHHhc
Confidence 234444443 234677888754321 1368999999964 457777888888765
No 129
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.91 E-value=5e-22 Score=210.95 Aligned_cols=285 Identities=13% Similarity=0.150 Sum_probs=187.3
Q ss_pred hHHHHHHHHHHHhC----C----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 211 TTVVVEEKMSALEG----A----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g----~----~-~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+|+++++++++ . + ++++++++++|+.+++.+++++||+|++++|+|.+... .++..|+++..++
T Consensus 68 g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~----~~~~~g~~~~~~~ 143 (391)
T PRK07309 68 GLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEP----IVNLVGAEIVEID 143 (391)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH----HHHHcCCEEEEEe
Confidence 36788888888763 2 2 35555566799999999999999999999999998653 3445678777775
Q ss_pred C------CCHHHHHHhccC--CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc-----ccc-
Q 009172 282 P------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL- 344 (541)
Q Consensus 282 ~------~dle~Le~ai~~--~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~-----~~l- 344 (541)
. .|++.+++++++ .++++|++++|+||||.+++ +++|.++|++||+++|+|++|...... ...
T Consensus 144 ~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~ 223 (391)
T PRK07309 144 TTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAE 223 (391)
T ss_pred cCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHH
Confidence 3 368899988864 24899999999999999987 778889999999999999998754321 111
Q ss_pred -ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHH
Q 009172 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALR 419 (541)
Q Consensus 345 -~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t----l~~r~~~~~~na~~ 419 (541)
.....+++.|+||.++.+| ...|++++++++++.+...........+......+...++. .....++..+++..
T Consensus 224 ~~~~~~i~~~S~SK~~g~~G-lRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (391)
T PRK07309 224 YLPDQTILINGLSKSHAMTG-WRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDY 302 (391)
T ss_pred hccCCEEEEecChhhccCcc-ceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Confidence 1233489999999998665 45899999999998888654433333444444444444432 11122334456666
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHH-cCCCceeecCCCcccceecCcc
Q 009172 420 MAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDA-LKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 420 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~-~~~~~~l~~-L~~~~iavS~G~~~sl~~~pa~ 497 (541)
+.+.|+++ .+ .+..|. .|.++|+.++.+. .....+.+. ++..++.+..|..+.
T Consensus 303 ~~~~l~~~-~~-~~~~p~----------------gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~------- 357 (391)
T PRK07309 303 IIEKMTDL-GF-KIIKPD----------------GAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFG------- 357 (391)
T ss_pred HHHHHHHC-CC-eecCCC----------------eeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhC-------
Confidence 77777765 22 122221 3445688876421 122344433 233466666654321
Q ss_pred cccccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009172 498 MSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL~~AL~ 539 (541)
...++++||+++.+ +.++.++.|.+.++
T Consensus 358 --------------~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~ 387 (391)
T PRK07309 358 --------------PYGEGYVRLSYAASMETIKEAMKRLKEYME 387 (391)
T ss_pred --------------CCCCCEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 01257999999863 34455555555554
No 130
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.91 E-value=3.4e-22 Score=212.26 Aligned_cols=284 Identities=17% Similarity=0.192 Sum_probs=188.3
Q ss_pred CCCCchh-HHHHHHHHHHHh----C----C--CcEEEeCCHH-HHHHHHHHHhccCCCE--EEEcCCCCcchHHHHHhhc
Q 009172 205 GRYGNPT-TVVVEEKMSALE----G----A--ESTVIMASGM-SASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVL 270 (541)
Q Consensus 205 ~R~~~p~-~~~Le~~LA~l~----g----~--~~~i~~sSG~-~Ai~~al~all~~GD~--VIv~~~~y~~~~~~~~~~l 270 (541)
.+|+.+. ..+|++++|+++ | . ++.|++++|+ +++.+++.+++++||+ |+++.|+|..... ..
T Consensus 58 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~----~~ 133 (393)
T TIGR03538 58 STYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEG----AA 133 (393)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHH----HH
Confidence 3455443 578888888876 2 2 2356666665 9999999999999986 9999999987553 34
Q ss_pred ccCCcEEEEeCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCc
Q 009172 271 PKMGITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN 340 (541)
Q Consensus 271 ~~~Gi~v~~vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~ 340 (541)
...|+++..++. .|++++++++.+ ++|+|++++|+||||.+++ +++|+++|+++|++||+||+|.....
T Consensus 134 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~ 212 (393)
T TIGR03538 134 LLAGAEPYFLNCTAENGFLPDFDAVPESVWR-RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYF 212 (393)
T ss_pred HhcCCeEEEeeccccCCCCCCHHHHHHHHhh-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhccc
Confidence 456777777653 267889888866 5999999999999999998 67888889999999999999875432
Q ss_pred c---cc---c----cc-----CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-
Q 009172 341 Q---KA---L----SL-----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK- 404 (541)
Q Consensus 341 ~---~~---l----~~-----gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~- 404 (541)
. .+ . .. ...+++.|+||.++.+| ...|++++++++++++.......+...+......+...+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~G-lRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 291 (393)
T TIGR03538 213 DEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPG-LRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWND 291 (393)
T ss_pred CCCCCCcCHHHhcccccccccccEEEEecchhhcCCcc-cceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC
Confidence 1 11 0 11 22489999999887666 4578999999999888876654454455544444333332
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CCCce
Q 009172 405 --TLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KIPYI 481 (541)
Q Consensus 405 --tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L-~~~~i 481 (541)
.+....+...++...+.+.|+++ + .+..| ..|.++|++++.+ ..+|.+.+ +..++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~L~~~--~-~~~~p----------------~gg~f~~~~~~~~---~~~~~~~l~~~~gV 349 (393)
T TIGR03538 292 EQHVRENRALYREKFAAVLEILGQV--L-DLELP----------------DAGFYLWPKVPGD---DEAFARALYEEENV 349 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh--C-cccCC----------------CeeEEEEEECCCC---HHHHHHHHHHHCCE
Confidence 23333344456666677777653 1 11122 2577889998722 23455554 34678
Q ss_pred eecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHH
Q 009172 482 APSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKA 532 (541)
Q Consensus 482 avS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~ 532 (541)
.+..|..+..-... ..-..++||||++. +.+++.+
T Consensus 350 ~v~pg~~f~~~~~~---------------~~~~~~~~Ris~~~-~~~~l~~ 384 (393)
T TIGR03538 350 TVLPGRFLAREAEG---------------VNPGEGRVRIALVA-PLEECVE 384 (393)
T ss_pred EEeCCccccccccC---------------CCCCCCEEEEEecC-CHHHHHH
Confidence 88777654210000 00124799999986 3444333
No 131
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.91 E-value=3.4e-22 Score=208.20 Aligned_cols=304 Identities=18% Similarity=0.157 Sum_probs=208.9
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC--
Q 009172 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al-l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-- 283 (541)
+..|...++|++|++++|.+++++++||++|+..++.++ +++||+|+++.++|.++...+ ...|+++.+++.+
T Consensus 15 ~~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~ 90 (352)
T cd00616 15 TLGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAI----LLLGATPVFVDIDPD 90 (352)
T ss_pred cCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHH----HHcCCeEEEEecCCC
Confidence 346889999999999999988999999999999999988 689999999999999876433 4468888877532
Q ss_pred ----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCccc--ccccCCcEEEECCc-
Q 009172 284 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--ALSLGADLVLHSAT- 356 (541)
Q Consensus 284 ----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~--~l~~gaDivv~S~s- 356 (541)
|++++++++++ ++++|+++ |++|.+.|+++|.++|+++|+++|+|++++.+.... ......|+.+.|++
T Consensus 91 ~~~~d~~~l~~~i~~-~~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~ 166 (352)
T cd00616 91 TYNIDPELIEAAITP-RTKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHP 166 (352)
T ss_pred cCCcCHHHHHHhcCc-CCeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCC
Confidence 68999999976 59999985 578999999999999999999999999987654322 12223688999976
Q ss_pred -cccCCCCCceEEEEEeC-hHHHHHHHHHhhh---------------cCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 009172 357 -KFIGGHNDVLAGSISGS-GKLVTQIRNLHHV---------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALR 419 (541)
Q Consensus 357 -K~lgg~g~v~gG~vv~~-~~li~~l~~~~~~---------------~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~ 419 (541)
|+++++ .||+++.+ +++.++++..... +...+++..+++.+..++.++...++..++++.
T Consensus 167 ~K~~~~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~ 243 (352)
T cd00616 167 TKNLTTG---EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAER 243 (352)
T ss_pred CCCCccc---CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999544 26777765 5777776654321 112355667777777777888888888899999
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCCcccceecCccc
Q 009172 420 MAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 420 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
+.+.|.+.++++.+ .+.-.. .....++.|.+++. ......+.+.|...++.++. ......+....
T Consensus 244 ~~~~L~~~~g~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~--~~~~~~~~~~~ 309 (352)
T cd00616 244 YKELLADLPGIRLP-DVPPGV-----------KHSYHLYVIRLDPEAGESRDELIEALKEAGIETRV--HYPPLHHQPPY 309 (352)
T ss_pred HHHHhcCCCCccCC-CCCCCC-----------ceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeee--ecCccccCHhh
Confidence 99999987766422 221000 01345888888630 12334455555444443321 11110000000
Q ss_pred c------cccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 499 S------YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 499 ~------~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
. ...++. +..+..+.|||+++...+++.++.+.++|+
T Consensus 310 ~~~~~~~~~~~~~----a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 310 KKLLGYPPGDLPN----AEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred hhccCCCcCCChH----HHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 0 000111 111235799999999999999999888874
No 132
>PLN00175 aminotransferase family protein; Provisional
Probab=99.91 E-value=1.7e-21 Score=208.41 Aligned_cols=272 Identities=17% Similarity=0.170 Sum_probs=183.7
Q ss_pred hHHHHHHHHHHHh----CC----CcEEEeCC-HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 211 TTVVVEEKMSALE----GA----ESTVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----~~~i~~sS-G~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+|++++++++ |. +..|++++ +++|+.+++.+++++||+|++++|.|..... .++..|.+++.++
T Consensus 92 G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~ 167 (413)
T PLN00175 92 GVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA----TLSMAGAKIKTVT 167 (413)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHH----HHHHcCCEEEEEE
Confidence 3567788887765 32 22355455 5699999999999999999999999987543 3445688877775
Q ss_pred C------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc---c-cc---
Q 009172 282 P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LS--- 345 (541)
Q Consensus 282 ~------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~---~-l~--- 345 (541)
. .|+++|++++.+ ++|+|++++|+||||.+++ +++|.++|++||+++|+||+|....... + ..
T Consensus 168 ~~~~~~~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~ 246 (413)
T PLN00175 168 LRPPDFAVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPG 246 (413)
T ss_pred CCcccCCCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCC
Confidence 3 368899999987 5999999999999999986 6678889999999999999987543211 1 11
Q ss_pred -cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q 009172 346 -LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRM 420 (541)
Q Consensus 346 -~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t----l~~r~~~~~~na~~l 420 (541)
.+..|++.|+||.++.+| ...||+++++++++.+...........+....+++...++. +....+...++++.+
T Consensus 247 ~~~~vi~i~SfSK~~~~~G-~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l 325 (413)
T PLN00175 247 MYERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDIL 325 (413)
T ss_pred CcCcEEEEecchhhccCcc-hheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 234689999999998665 35799999999999888766544444555555555555532 333344556777888
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-CHHHHHHHHHHc-CCCceeecCCCcccceecCccc
Q 009172 421 AEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 421 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g-~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~ 498 (541)
.+.|+++ .+. +..|. .|.++++.+.. +......|.+.| +..++.+..|..+..-
T Consensus 326 ~~~L~~~-g~~-~~~p~----------------g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~------ 381 (413)
T PLN00175 326 VEGLKEV-GFK-VYPSS----------------GTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLN------ 381 (413)
T ss_pred HHHHHHC-CCe-ecCCC----------------eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCC------
Confidence 8888875 232 22121 34467887732 211234555554 3446666665432110
Q ss_pred ccccCCHHHHHhcCCCCCeEEEEecC
Q 009172 499 SYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
.+-.+++|||+++.
T Consensus 382 ------------~~~~~~~iRls~~~ 395 (413)
T PLN00175 382 ------------PEDGKNLVRFAFCK 395 (413)
T ss_pred ------------CCCCCCEEEEEEcC
Confidence 00125799999996
No 133
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.91 E-value=2.8e-22 Score=210.23 Aligned_cols=282 Identities=17% Similarity=0.186 Sum_probs=188.6
Q ss_pred CCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC
Q 009172 206 RYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~ 283 (541)
+|+.+....||++||++++.. +.|++++|+ +++..++.++ .+|| +++..|.|.... ..++..|+++..++.+
T Consensus 51 ~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~----~~~~~~g~~~~~v~~~ 124 (356)
T PRK08056 51 RYPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYR----RALQQVGCEIRRYSLR 124 (356)
T ss_pred cCcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHH----HHHHHcCCeEEEEecc
Confidence 466666889999999999863 455566665 8988888876 6776 666788887644 3455668888777532
Q ss_pred -----CH-HHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc-----cc-ccCC
Q 009172 284 -----DM-EGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-----AL-SLGA 348 (541)
Q Consensus 284 -----dl-e~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~-----~l-~~ga 348 (541)
++ +++++.+++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|....... .+ ....
T Consensus 125 ~~~~~~~~~~~~~~~~~-~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 203 (356)
T PRK08056 125 EADGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPH 203 (356)
T ss_pred cccCCCccHHHHHhccC-CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCC
Confidence 22 355566665 5999999999999999999 7788999999999999999986543211 11 2346
Q ss_pred cEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHH
Q 009172 349 DLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEIL 424 (541)
Q Consensus 349 Divv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~---tl~~r~~~~~~na~~la~~L 424 (541)
++++.|+||+++.+|. ..|++++ ++++++.++..... ...+...+.++...++ .+....++..++++.+.+.|
T Consensus 204 ~i~~~S~SK~~~~~G~-RiG~~v~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L 280 (356)
T PRK08056 204 LWVLRSLTKFYAIPGL-RLGYLVNSDDAAVARMRRQQMP--WSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQAL 280 (356)
T ss_pred EEEEEechhhccCcch-hheeeecCCHHHHHHHHHhCCC--CchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999996664 4678887 45677777654322 2334444444333332 22233344567778888888
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCC
Q 009172 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 504 (541)
Q Consensus 425 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~ 504 (541)
++++.+. + +|. .|+.+++.++.+ ...|.+.|...++.+..|..+.
T Consensus 281 ~~~~~~~-~-~~~----------------~~~~~~~~~~~~---~~~~~~~l~~~gI~v~~~~~f~-------------- 325 (356)
T PRK08056 281 CALPLLT-V-WPG----------------RANYLFLRCERP---DIDLQRALLTQRILIRSCANYP-------------- 325 (356)
T ss_pred hcCCCcE-E-cCC----------------CCcEEEEEcCCC---hHHHHHHHHHCCeEEEECCCCC--------------
Confidence 8766542 2 221 366788888643 2345555555576666554321
Q ss_pred HHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009172 505 QSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 539 (541)
Q Consensus 505 ~~~~~~~gi~~~~IRlSvG~-Ed~edli~dL~~AL~ 539 (541)
+...++|||+++. ++.+.+++.|++.++
T Consensus 326 -------~~~~~~iRis~~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 326 -------GLDSRYYRVAIRSAAENERLLAALRNVLT 354 (356)
T ss_pred -------CCCCCEEEEEEcCHHHHHHHHHHHHHHHc
Confidence 1235799999997 566777777776653
No 134
>PRK08912 hypothetical protein; Provisional
Probab=99.91 E-value=7.3e-22 Score=209.24 Aligned_cols=291 Identities=16% Similarity=0.179 Sum_probs=189.6
Q ss_pred CCCCch-hHHHHHHHHHHHh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009172 205 GRYGNP-TTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~----g~----~-~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~G 274 (541)
.+|+.+ ...+||+++++++ |. + +.++++++++++.+++.+++++||+|+++.|+|..... .++..|
T Consensus 57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g 132 (387)
T PRK08912 57 NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP----LIRRAG 132 (387)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH----HHHHcC
Confidence 345554 3568888888765 32 2 34555555699999999999999999999999987553 445668
Q ss_pred cEEEEeCC------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc----
Q 009172 275 ITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 275 i~v~~vd~------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~---- 341 (541)
+++..++. .|++++++++++ ++++|++++|+||||.+++ +++|.++|+++++++|+|++|......
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 211 (387)
T PRK08912 133 GVPRLVRLEPPHWRLPRAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRH 211 (387)
T ss_pred CEEEEEecCcccCcCCHHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCC
Confidence 87776643 268999998876 5899999999999999998 667889999999999999997543211
Q ss_pred cc---c-c-cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH----HHHHHHHHH
Q 009172 342 KA---L-S-LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQ 412 (541)
Q Consensus 342 ~~---l-~-~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l----~tl~~r~~~ 412 (541)
.+ . . .+.++++.|+||.++.+| ...|++++++++++.+.......+...++.....+...+ +.+....++
T Consensus 212 ~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 290 (387)
T PRK08912 212 IPLMTLPGMRERTVKIGSAGKIFSLTG-WKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRAD 290 (387)
T ss_pred cChhhCCCccCceEEEeechhhccCcC-ceeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHH
Confidence 11 1 1 245799999999998665 457999999999988877655433333333333322222 223333445
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-C-HHHHHHHHHHc-CCCceeecCCCcc
Q 009172 413 QNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-D-LTATIKFIDAL-KIPYIAPSFGGCE 489 (541)
Q Consensus 413 ~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g-~-~~~~~~~l~~L-~~~~iavS~G~~~ 489 (541)
..++.+.+.+.|+++ ++. +..| ..|.++|+.++. + ......|.+.+ +..++.+..|..+
T Consensus 291 ~~~~~~~l~~~L~~~-g~~-~~~~----------------~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 352 (387)
T PRK08912 291 LARSRDRLAAGLRRI-GFP-VLPS----------------QGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAF 352 (387)
T ss_pred HHHHHHHHHHHHHhC-CCc-ccCC----------------CcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhh
Confidence 556777788888775 221 2111 134567888863 1 12344555554 4457777666433
Q ss_pred cceecCcccccccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHH
Q 009172 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQAL 538 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL~~AL 538 (541)
... +-..+++||+++.+ ..++.++.|.++|
T Consensus 353 ~~~-------------------~~~~~~iRl~~~~~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 353 YEE-------------------DPVTSVVRFCFAKRDATLDEAVERLAAAR 384 (387)
T ss_pred CCC-------------------CCCCCEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 110 01247999999964 2223344444444
No 135
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=2.2e-22 Score=212.17 Aligned_cols=281 Identities=17% Similarity=0.234 Sum_probs=191.0
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+++....|+++||+++|.+ +.|++++|+ +++..++.+++++||+|+++.|+|+... ..++..|+++..++.
T Consensus 66 ~~Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~----~~~~~~g~~~~~v~~ 141 (371)
T PRK05166 66 RLYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHE----DYPTMMGARVERVTV 141 (371)
T ss_pred hcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCeEEEeec
Confidence 4566666668999999999864 456666665 8999999999999999999999998754 334556888877754
Q ss_pred C-----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEEcCCCCCCcc----cc---c-cc-
Q 009172 283 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KA---L-SL- 346 (541)
Q Consensus 283 ~-----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~--~gillvvDea~a~~~~~----~~---l-~~- 346 (541)
+ |++++++++++ ++++|++++|+||||.++|.+++.++++. .++++|+|++|...... .. . ..
T Consensus 142 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 220 (371)
T PRK05166 142 TPDLGFDLDALCAAVAR-APRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARG 220 (371)
T ss_pred CCCCCCCHHHHHHhhhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcC
Confidence 2 68999999877 48999999999999999998777777653 47899999997643321 11 1 11
Q ss_pred CCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHH
Q 009172 347 GADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAE 422 (541)
Q Consensus 347 gaDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l---~tl~~r~~~~~~na~~la~ 422 (541)
...+++.|+||.++-+| +..||++. ++++++.++.....++ .+.....++...+ +.++...+...++.+.+.+
T Consensus 221 ~~vi~i~SfSK~~~l~G-lRiG~~i~~~~~l~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 297 (371)
T PRK05166 221 LPWIVLRTFSKAYGLAG-LRVGYGLVSDPELVGLLDRVRTPFN--VNGAAQAAALAALDDEEHLAKGVALALAERERLKK 297 (371)
T ss_pred CCEEEEeechHhhhcch-hheeeeecCCHHHHHHHHHhccCCC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 23588999999998555 35788664 6788887776543333 3443333333332 2344444555667777888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCccccccc
Q 009172 423 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 423 ~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
.|+++ ++. + +|. .|+++|+.++.+ ..+|.+.|...++.+..|.. +
T Consensus 298 ~L~~~-g~~-~-~p~----------------~g~fl~~~~~~~---~~~l~~~l~~~gi~v~p~~~------~------- 342 (371)
T PRK05166 298 ELAEM-GYR-I-APS----------------RANFLFFDARRP---ASAVAEALLRQGVIVKPWKQ------P------- 342 (371)
T ss_pred HHHHC-cCe-e-CCC----------------cCCEEEEeCCCC---HHHHHHHHHHCCeEEecCCC------C-------
Confidence 88876 332 2 221 467888887532 34455555545666665421 0
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHH
Q 009172 503 LSQSERLKYGIMDNLVRFSFGVED-FEDLKADVLQAL 538 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~Ed-~edli~dL~~AL 538 (541)
+ .+++|||+++..+ .+++++.|+..+
T Consensus 343 ---------~-~~~~iRi~~~~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 343 ---------G-FETFIRVSIGSPEENDHFVAALDKVL 369 (371)
T ss_pred ---------C-CCCeEEEEcCCHHHHHHHHHHHHHHh
Confidence 1 2579999999754 566666666544
No 136
>PRK09148 aminotransferase; Validated
Probab=99.91 E-value=8.5e-22 Score=210.19 Aligned_cols=285 Identities=14% Similarity=0.122 Sum_probs=184.8
Q ss_pred CCCCch-hHHHHHHHHHHHh----CC----CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009172 205 GRYGNP-TTVVVEEKMSALE----GA----ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~----g~----~~~i~~sSG-~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~G 274 (541)
.+|+.+ ...+|++++|+++ |. ++.|++++| ++++.+++..++++||+|++++|+|...... +...|
T Consensus 62 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~----~~~~g 137 (405)
T PRK09148 62 HRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFG----FIMAG 137 (405)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHH----HHhcC
Confidence 445544 3668888888876 42 224555555 5999999999999999999999999986533 34468
Q ss_pred cEEEEeCCC----CHHHHHHhc---cCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEEcCCCCCCcc---
Q 009172 275 ITATVIDPA----DMEGLEAAL---NNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ--- 341 (541)
Q Consensus 275 i~v~~vd~~----dle~Le~ai---~~~~tklV~lesp~NPtG~v~di---~~Ia~la~~~gillvvDea~a~~~~~--- 341 (541)
+++..++.. +++++++++ .+ ++++|++++|+||||.+++. ++|.++|+++|++||+||+|......
T Consensus 138 ~~v~~v~~~~~~~~~~~l~~~~~~~~~-~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (405)
T PRK09148 138 GVIRSVPAEPDEEFFPALERAVRHSIP-KPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNP 216 (405)
T ss_pred CEEEEEeCCCCCCCccCHHHHHhhccc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCC
Confidence 888777532 234444444 34 58999999999999999996 57888899999999999998653211
Q ss_pred --cccc----cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHH
Q 009172 342 --KALS----LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQ 411 (541)
Q Consensus 342 --~~l~----~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~----tl~~r~~ 411 (541)
.... .+..+++.|+||.++.+| ...||+++++++++.+...........+.....++...++ .+....+
T Consensus 217 ~~s~~~~~~~~~~~i~~~SfSK~~~~pG-lR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~ 295 (405)
T PRK09148 217 PPSVLQVPGAKDVTVEFTSMSKTFSMAG-WRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRE 295 (405)
T ss_pred CCChhhCCCccCcEEEEeccccccCCcc-hheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHH
Confidence 1111 123467899999998666 4589999999999988876654443334333333333332 2333344
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--HHHHHHHHHc-CCCceeecCCCc
Q 009172 412 QQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDAL-KIPYIAPSFGGC 488 (541)
Q Consensus 412 ~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~--~~~~~~l~~L-~~~~iavS~G~~ 488 (541)
...++...+.+.|+++. + .+..| ..|.++|++++... ....+|.+.+ +..++.+..|..
T Consensus 296 ~~~~~r~~l~~~L~~~~-~-~~~~p----------------~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~ 357 (405)
T PRK09148 296 LYKKRRDVLVESFGRAG-W-DIPPP----------------AASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVG 357 (405)
T ss_pred HHHHHHHHHHHHHHHcC-C-ccCCC----------------CeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchh
Confidence 45566777778887642 2 11112 14667899986421 1123444443 345777776644
Q ss_pred ccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009172 489 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVL 535 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~ 535 (541)
+.. ..++++||+++ ++.+++.+.|+
T Consensus 358 f~~---------------------~~~~~~Ri~~~-~~~~~l~~al~ 382 (405)
T PRK09148 358 FGE---------------------HGDGYVRIALV-ENEQRIRQAAR 382 (405)
T ss_pred hCC---------------------CCCCeEEEEec-CCHHHHHHHHH
Confidence 310 12478999998 45555444443
No 137
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.91 E-value=1.2e-21 Score=208.77 Aligned_cols=284 Identities=21% Similarity=0.209 Sum_probs=193.4
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCH
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~--~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dl 285 (541)
.++...+|+++||+++|.+.+++++||++|+..++..+.. +|+.|++....|..+... ++..|+++..++..|+
T Consensus 88 ~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~ 163 (402)
T TIGR01821 88 TNIPHVELEAELADLHGKESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEG----IRHSGAEKFIFRHNDV 163 (402)
T ss_pred CcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHH----HHHcCCeEEEECCCCH
Confidence 3678899999999999998999999999999999987765 677777766666554432 3345777766777788
Q ss_pred HHHHHhcc---CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCccc---------ccccCCcEEEE
Q 009172 286 EGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLH 353 (541)
Q Consensus 286 e~Le~ai~---~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~---------~l~~gaDivv~ 353 (541)
+++++.++ +.++++|++|+|+||+|.+.|+++|.++|+++|+++|+||+++.+.... ......|+++.
T Consensus 164 ~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~ 243 (402)
T TIGR01821 164 AHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEG 243 (402)
T ss_pred HHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEE
Confidence 88887775 2248999999999999999999999999999999999999977432110 01123689999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHhCC
Q 009172 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAEILEAHP 428 (541)
Q Consensus 354 S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~--~g~~~s~~~a~l~l~~l~tl~---~r~~~~~~na~~la~~L~~~p 428 (541)
|++|.+++. ||++++++++++.++..... +....++..++.++..++.+. .+.++..++..++.+.|+++
T Consensus 244 t~sKa~g~~----GG~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~- 318 (402)
T TIGR01821 244 TLAKAFGVV----GGYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL- 318 (402)
T ss_pred echhhhccC----CceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc-
Confidence 999999965 48899999988888754432 234456666666556665533 23444557778888888764
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccceecCcccccccCCHHH
Q 009172 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSE 507 (541)
Q Consensus 429 ~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~~~~~~~~~~ 507 (541)
++ +.++ ..++++.+.++ ....+..+.+.|. ..++.++... .|..
T Consensus 319 g~-----~~~~-------------~~~~i~~i~~~-~~~~a~~~~~~L~~~~Gi~v~~~~------~p~~---------- 363 (402)
T TIGR01821 319 GI-----PVIP-------------NPSHIVPVIIG-DAALCKKVSDLLLNKHGIYVQPIN------YPTV---------- 363 (402)
T ss_pred CC-----CcCC-------------CCCCEEEEEeC-CHHHHHHHHHHHHhcCCEEEEeEC------CCCC----------
Confidence 22 1111 13568888774 3334566766663 3355544311 1110
Q ss_pred HHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 508 RLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 508 ~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
....+.||||+....+++.++.+.++|+
T Consensus 364 ----~~g~~~lRis~~~~~t~edi~~~~~~l~ 391 (402)
T TIGR01821 364 ----PRGTERLRITPTPAHTDKMIDDLVEALL 391 (402)
T ss_pred ----CCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 0123689999876544444444444443
No 138
>PRK09265 aminotransferase AlaT; Validated
Probab=99.91 E-value=1.4e-21 Score=208.36 Aligned_cols=289 Identities=13% Similarity=0.100 Sum_probs=181.6
Q ss_pred CCCchh-HHHHHHHHHHHh------CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcE
Q 009172 206 RYGNPT-TVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 206 R~~~p~-~~~Le~~LA~l~------g~-~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
+|+.+. ...|++++|+++ +. .+.|++++|+ +++.+++.+++++||+|++++|+|......+ ...|..
T Consensus 67 ~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~ 142 (404)
T PRK09265 67 GYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAV----SLSGGK 142 (404)
T ss_pred CCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHH----HHcCCE
Confidence 344443 468999999987 33 2456666665 8899999999999999999999998755433 334655
Q ss_pred EEEeCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc-----
Q 009172 277 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (541)
Q Consensus 277 v~~vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~----- 341 (541)
+..++. .|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|......
T Consensus 143 ~v~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 221 (404)
T PRK09265 143 PVHYLCDEEAGWFPDLDDIRSKITP-RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHI 221 (404)
T ss_pred EEEEecccccCCCCCHHHHHHhccc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcC
Confidence 554421 368899998876 5999999999999999999 888999999999999999997643211
Q ss_pred ccccc--C-CcEEEECCccccCCCCCceEEEEEe--ChHH----HHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHH-
Q 009172 342 KALSL--G-ADLVLHSATKFIGGHNDVLAGSISG--SGKL----VTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHL- 408 (541)
Q Consensus 342 ~~l~~--g-aDivv~S~sK~lgg~g~v~gG~vv~--~~~l----i~~l~~~~~~~g~~~s~~~a~l~l~~l~---tl~~- 408 (541)
..... . .-+++.|+||.++.+|. ..|+++. ++++ ++.+.... ......+.....++...+. .+..
T Consensus 222 ~~~~~~~~~~vi~~~S~SK~~~~pGl-RiG~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~ 299 (404)
T PRK09265 222 SIASLAPDLLCVTFNGLSKAYRVAGF-RVGWMVLSGPKKHAKGYIEGLDMLA-SMRLCANVPAQHAIQTALGGYQSINEL 299 (404)
T ss_pred CHHHcCCCceEEEEecchhhccCccc-ceEEEEEeCchHHHHHHHHHHHHHh-ccccCCCcHHHHHHHHHhcCchhHHHH
Confidence 11111 1 23678999999987764 4677774 4443 33332221 1122233333333333332 1111
Q ss_pred --HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH----HHHHHHHHHcCCCcee
Q 009172 409 --RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL----TATIKFIDALKIPYIA 482 (541)
Q Consensus 409 --r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~----~~~~~~l~~L~~~~ia 482 (541)
..++..+++..+.+.|++++++. +..| ..|.++|+.++... ...+.+.+.+...++.
T Consensus 300 ~~~~~~~~~~r~~~~~~L~~~~~~~-~~~p----------------~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~ 362 (404)
T PRK09265 300 ILPGGRLYEQRDRAWELLNAIPGVS-CVKP----------------KGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVL 362 (404)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCc-ccCC----------------CcceEEEEEecccccCCCCHHHHHHHHHHhCCEE
Confidence 12344566677778887665432 2222 14668888886421 1233344555556776
Q ss_pred ecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009172 483 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 539 (541)
Q Consensus 483 vS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~--Ed~edli~dL~~AL~ 539 (541)
+..|..+.. ..++++||+++. |..++.++.|.++|+
T Consensus 363 v~pg~~F~~---------------------~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~ 400 (404)
T PRK09265 363 LVQGTGFNW---------------------PEPDHFRIVTLPRVDDLEEAIGRIGRFLS 400 (404)
T ss_pred EECchhhCC---------------------CCCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 666543210 125789999974 234566666666665
No 139
>PRK09105 putative aminotransferase; Provisional
Probab=99.91 E-value=4.6e-22 Score=209.80 Aligned_cols=278 Identities=18% Similarity=0.228 Sum_probs=184.7
Q ss_pred CCCCchhHHHHHHHHHHHhCC-CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 205 GRYGNPTTVVVEEKMSALEGA-ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~-~~~i~~sSG-~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
++|+.+...+|++.|++++|. .+.|++++| ++++.+++.+++++||+|++++|+|..... .++..|+++..++.
T Consensus 73 ~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~----~~~~~g~~~~~v~~ 148 (370)
T PRK09105 73 GRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWR----AADAQGAPVAKVPL 148 (370)
T ss_pred cCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHH----HHHHcCCeEEEecC
Confidence 456666788999999999986 344555555 599999999999999999999999988653 44556888777753
Q ss_pred -----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEEcCCCCCCcc----cccccC-CcE
Q 009172 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KALSLG-ADL 350 (541)
Q Consensus 283 -----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~--~gillvvDea~a~~~~~----~~l~~g-aDi 350 (541)
.|++++++. .+ ++++|++++||||||.+++.++|.++++. +++++|+||+|...... ...... ..+
T Consensus 149 ~~~~~~d~~~l~~~-~~-~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi 226 (370)
T PRK09105 149 RADGAHDVKAMLAA-DP-NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLI 226 (370)
T ss_pred CCCCCCCHHHHHhc-CC-CCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEE
Confidence 367888776 34 48999999999999999998888888753 48999999998543211 111112 347
Q ss_pred EEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhC
Q 009172 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 351 vv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l---~tl~~r~~~~~~na~~la~~L~~~ 427 (541)
++.|+||.+|..| ...|++++++++++.+... . ....+......+...+ +.+....++..++.+.+.+.|+++
T Consensus 227 ~~~SfSK~~g~~G-lRiG~~v~~~~~i~~l~~~-~--~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 302 (370)
T PRK09105 227 VLRTFSKLYGMAG-MRLGLAAARPDLLAKLARF-G--HNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK 302 (370)
T ss_pred EEecccHhhcCCc-cceeeeecCHHHHHHHHhc-C--CCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8899999998776 4578999999999888765 2 1223333333333333 233333455556777788888775
Q ss_pred CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHH
Q 009172 428 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 507 (541)
Q Consensus 428 p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~ 507 (541)
++. +. | ..|+++.+.++.+ ..++.+.|...++.+ |..+ +
T Consensus 303 -g~~-~~-~----------------~~~~f~~~~~~~~---~~~l~~~L~~~gI~v--~~~~-----~------------ 341 (370)
T PRK09105 303 -GYK-CT-P----------------SQANCFMVDVKRP---AKAVADAMAKQGVFI--GRSW-----P------------ 341 (370)
T ss_pred -CCC-cC-C----------------CCCcEEEEeCCCC---HHHHHHHHHHCCcEE--ecCC-----C------------
Confidence 221 11 1 1356777776532 234455544445554 2111 0
Q ss_pred HHhcCCCCCeEEEEecCC-CHHHHHHHHHHHH
Q 009172 508 RLKYGIMDNLVRFSFGVE-DFEDLKADVLQAL 538 (541)
Q Consensus 508 ~~~~gi~~~~IRlSvG~E-d~edli~dL~~AL 538 (541)
..++++|||++.+ +.+.+++.|++.+
T Consensus 342 -----~~~~~~Ris~~~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 342 -----IWPNWVRVTVGSEEEMAAFRSAFAKVM 368 (370)
T ss_pred -----CCCCeEEEEcCCHHHHHHHHHHHHHHh
Confidence 1257999999964 3455666665544
No 140
>PRK03321 putative aminotransferase; Provisional
Probab=99.90 E-value=1.7e-22 Score=211.30 Aligned_cols=279 Identities=18% Similarity=0.225 Sum_probs=196.2
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+.+...++++.+|++++.+ +.|++++|+ +++..++..++++||+|+++.++|..... ..+..|.++..++.
T Consensus 52 ~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~----~~~~~g~~~~~v~~ 127 (352)
T PRK03321 52 NRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPI----LVQVAGATPVQVPL 127 (352)
T ss_pred CcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHH----HHHHcCCEEEEccC
Confidence 4456678899999999999874 466677777 77888888889999999999999876432 34556888877764
Q ss_pred C-----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh--CCCEEEEEcCCCCCCcc----ccc----ccC
Q 009172 283 A-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQ----KAL----SLG 347 (541)
Q Consensus 283 ~-----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~--~gillvvDea~a~~~~~----~~l----~~g 347 (541)
+ |++++++++++ ++++|++++|+||||.++|.++|.++|++ +++++|+|++|...... .+. ...
T Consensus 128 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 206 (352)
T PRK03321 128 TPDHTHDLDAMAAAITD-RTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHP 206 (352)
T ss_pred CCCCCCCHHHHHHhhcc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCC
Confidence 3 68999999877 59999999999999999999999999987 59999999997643321 111 113
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHH
Q 009172 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEIL 424 (541)
Q Consensus 348 aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l---~tl~~r~~~~~~na~~la~~L 424 (541)
..+++.|+||.+|.+| +..|++++++++++.+..... ....+.....++...+ +.+..++++..++...+.+.|
T Consensus 207 ~vi~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~~~~--~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L 283 (352)
T PRK03321 207 NVVVLRTFSKAYGLAG-LRVGYAVGHPEVIAALRKVAV--PFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAAL 283 (352)
T ss_pred CEEEEecchHHhhhHH-HhhhhhcCCHHHHHHHHHhcC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588899999998554 457999999999998876543 2334444444333333 444455555556666777777
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCC
Q 009172 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 504 (541)
Q Consensus 425 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~ 504 (541)
+++ ++. + .| ..|+++++.++.. ...|.+.|+..++.+..
T Consensus 284 ~~~-~~~-~-~~----------------~~g~~i~i~l~~~---~~~~~~~l~~~gI~v~~------------------- 322 (352)
T PRK03321 284 RAA-GWT-V-PP----------------SQANFVWLPLGER---TADFAAAAAEAGVVVRP------------------- 322 (352)
T ss_pred HHC-CCc-c-CC----------------CCCCEEEEeCCCC---HHHHHHHHHHCCEEEEc-------------------
Confidence 764 221 1 11 1467889988532 34566666555654431
Q ss_pred HHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHhh
Q 009172 505 QSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALHA 540 (541)
Q Consensus 505 ~~~~~~~gi~~~~IRlSvG~-Ed~edli~dL~~AL~~ 540 (541)
. .+..|||+++. ++.+.+++.|+++++.
T Consensus 323 ------~--~~~~iRi~~~~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 323 ------F--AGEGVRVTIGAPEENDAFLRAARAWRAG 351 (352)
T ss_pred ------c--CCCcEEEeeCCHHHHHHHHHHHHHHhcc
Confidence 0 12459999986 4678888888887754
No 141
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.1e-21 Score=208.25 Aligned_cols=286 Identities=13% Similarity=0.131 Sum_probs=185.0
Q ss_pred hhHHHHHHHHHHHhC-------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 210 PTTVVVEEKMSALEG-------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g-------~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
....+++++++++++ .++++++++|++|+.+++..++++||+|++++|.|..... .++..|+++..++.
T Consensus 66 ~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~ 141 (397)
T PRK07568 66 QGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNG----FATSAGVKIVPVTT 141 (397)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHH----HHHHcCCEEEEeec
Confidence 346789999998873 2345666666799999999999999999999999987543 34456777777653
Q ss_pred --------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc-----cccc-
Q 009172 283 --------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KALS- 345 (541)
Q Consensus 283 --------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~-----~~l~- 345 (541)
.+++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... ....
T Consensus 142 ~~~~g~~~~~~~~l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~ 220 (397)
T PRK07568 142 KIEEGFHLPSKEEIEKLITP-KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSL 220 (397)
T ss_pred CcccCCCCCCHHHHHHhcCc-cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhc
Confidence 146889998877 5999999999999999986 678999999999999999998653211 1111
Q ss_pred ---cCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHH
Q 009172 346 ---LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTA 417 (541)
Q Consensus 346 ---~gaDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~----tl~~r~~~~~~na 417 (541)
....+++.|+||.++.+|. ..|++++ ++++++.+...... ....+......+...++ .+....+...+++
T Consensus 221 ~~~~~~~i~~~S~SK~~~~~G~-R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 298 (397)
T PRK07568 221 EGLEDRVIIIDSVSKRYSACGA-RIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDTPESYFDEVREEYKKRR 298 (397)
T ss_pred CCCcCCEEEEecchhhccCCCc-ceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 1234899999999987664 4677776 46777776544322 22233333333333332 2333344455677
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC------CCceeecCCCcccc
Q 009172 418 LRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK------IPYIAPSFGGCESI 491 (541)
Q Consensus 418 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~------~~~iavS~G~~~sl 491 (541)
..+.+.|++++.+. +..|. .|.++|++++.. ....|.+.+. ..++.+..|..+..
T Consensus 299 ~~l~~~L~~~~~~~-~~~p~----------------g~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~ 359 (397)
T PRK07568 299 DILYEELNKIPGVV-CEKPK----------------GAFYIIAKLPVD--DAEDFAKWLLTDFNYNGETVMVAPASGFYA 359 (397)
T ss_pred HHHHHHHhcCCCce-ecCCC----------------cceEEEEecCCC--CHHHHHHHHHhhcccccceEEEeCchHhcC
Confidence 77888888765432 22221 344578888742 2233443331 13555555543210
Q ss_pred eecCcccccccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009172 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL~~AL~ 539 (541)
. .+...++||||++.. +.++.++.|.++|+
T Consensus 360 --~----------------~~~~~~~iRls~~~~~~~~~~~~~~l~~~l~ 391 (397)
T PRK07568 360 --T----------------PGLGKNEIRIAYVLNEEDLKRAMEILKEALE 391 (397)
T ss_pred --C----------------CCCCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 0 022347999999853 34455666666655
No 142
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.90 E-value=1.6e-21 Score=214.49 Aligned_cols=287 Identities=13% Similarity=0.113 Sum_probs=178.3
Q ss_pred CCCchh-HHHHHHHHHHHh------CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcE
Q 009172 206 RYGNPT-TVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 206 R~~~p~-~~~Le~~LA~l~------g~-~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
+|+.+. ..+||++||+++ +. .+.|++++|+ +++.+++.+++++||+|+++.|.|..... .....|.+
T Consensus 180 ~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~----~~~~~g~~ 255 (517)
T PRK13355 180 GYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTA----CVNLAGGT 255 (517)
T ss_pred CCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHH----HHHHCCCE
Confidence 355543 789999999987 33 2445566655 99999999999999999999999988653 33445777
Q ss_pred EEEeCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc-----
Q 009172 277 ATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (541)
Q Consensus 277 v~~vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~----- 341 (541)
+..++. .|++++++++++ ++|+|++++||||||.+++ +++|+++|++||++||+||+|......
T Consensus 256 ~v~~~~~~~~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~ 334 (517)
T PRK13355 256 AVHYRCDEQSEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHT 334 (517)
T ss_pred EEEeecCcccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcc
Confidence 666542 378999999987 5999999999999999998 778899999999999999998754321
Q ss_pred cccccCC---cEEEECCccccCCCCCceEEEEE--eChHHH----HHHHHHhhhcCCCccHHHHHHHHHhHH------HH
Q 009172 342 KALSLGA---DLVLHSATKFIGGHNDVLAGSIS--GSGKLV----TQIRNLHHVLGGALNPNAAYLIIRGMK------TL 406 (541)
Q Consensus 342 ~~l~~ga---Divv~S~sK~lgg~g~v~gG~vv--~~~~li----~~l~~~~~~~g~~~s~~~a~l~l~~l~------tl 406 (541)
....... .+++.|+||.++..|. ..||++ ++++++ +.+..... .....+....+++...++ ..
T Consensus 335 s~~~~~~~~~vi~~~S~SK~~~~~G~-RiG~~i~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~a~~~aL~~~~~~~~~ 412 (517)
T PRK13355 335 SIASLAPDLFCVTFSGLSKSHMIAGY-RIGWMILSGNKRIAKDYIEGLNMLAN-MRLCSNVPAQSIVQTALGGHQSVKDY 412 (517)
T ss_pred cHHHhCCCCeEEEEecchhhccCccc-ceEEEEeeCchhhHHHHHHHHHHHhc-CcCCcChHHHHHHHHHhcCCccHHHH
Confidence 1112212 2456999999987664 477877 445443 33332221 222233333333333332 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC----HHHHHHHHHHcCCCcee
Q 009172 407 HLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----LTATIKFIDALKIPYIA 482 (541)
Q Consensus 407 ~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~----~~~~~~~l~~L~~~~ia 482 (541)
....++..+++..+.+.|++.|++. +..|. .+.+++++++.. ......+.+.|...++.
T Consensus 413 ~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~----------------g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~ 475 (517)
T PRK13355 413 LVPGGRVYEQRELVYNALNAIPGIS-AVKPK----------------AAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVL 475 (517)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcc-cCCCC----------------eeeEEEeecCcccCCCCCHHHHHHHHHHhCCEE
Confidence 1122344456677778887765542 22221 233456577531 01222233445555777
Q ss_pred ecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHH---HHHHHHHH
Q 009172 483 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL---KADVLQAL 538 (541)
Q Consensus 483 vS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edl---i~dL~~AL 538 (541)
+..|..+.. -.++++|||+.. +.+++ ++.|.+.+
T Consensus 476 v~pg~~F~~---------------------~~~~~~Ris~~~-~~~~l~~a~~rl~~~~ 512 (517)
T PRK13355 476 IVQGTGFNW---------------------DKPDHFRVVYLP-RLEDLEDAMDRLADFF 512 (517)
T ss_pred EeCcchhCC---------------------CCcCEEEEEeCC-CHHHHHHHHHHHHHHH
Confidence 766643310 135799999963 44443 44444444
No 143
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.90 E-value=5.3e-22 Score=208.76 Aligned_cols=295 Identities=17% Similarity=0.155 Sum_probs=195.0
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCC---------------EEEEcCCCCcchHHHHHhhccc
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGG---------------HIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD---------------~VIv~~~~y~~~~~~~~~~l~~ 272 (541)
..+..+++++.+++++|.++++++++|++|+.+++.+++++|| +||++.+.|......+...+..
T Consensus 43 ~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~ 122 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRL 122 (363)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHh
Confidence 4577889999999999999999999999999999999999998 8888875554321112234455
Q ss_pred CCcEEEEeCC---CCHHHHHHhccCCCeeEEE-EeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCC
Q 009172 273 MGITATVIDP---ADMEGLEAALNNNNVSLFF-TESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA 348 (541)
Q Consensus 273 ~Gi~v~~vd~---~dle~Le~ai~~~~tklV~-lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~ga 348 (541)
.|.++++++. .|+++++++|++ +|++|+ +++|+||+|.++|+++|.++||++|+++|+|+++...+ .....+|+
T Consensus 123 ~g~~~v~v~~~~~~d~~~le~ai~~-~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-~~~~~~g~ 200 (363)
T TIGR01437 123 GGGKVVEAGYANECSAEQLEAAITE-KTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-QKYYRLGA 200 (363)
T ss_pred cCCeEEEEcCCCCCCHHHHHHhcCh-hceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-HHHHHcCC
Confidence 6888877763 489999999987 488665 67889999999999999999999999999999997332 23345689
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCC--ccHHHHHHHHHhHHHH----HHHHHHHHHHHHHHHH
Q 009172 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKTL----HLRVQQQNSTALRMAE 422 (541)
Q Consensus 349 Divv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~--~s~~~a~l~l~~l~tl----~~r~~~~~~na~~la~ 422 (541)
|++++|+||+++|+. +|++++++++++.++......+.. ........+..+++.+ ..+.++..+++..+.+
T Consensus 201 D~~~~S~~K~l~gp~---~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~ 277 (363)
T TIGR01437 201 DLVIYSGAKAIEGPT---SGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIE 277 (363)
T ss_pred CEEEEeCCcccCCCc---eEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHH
Confidence 999999999988763 788999888887765432211111 1111111111223222 2234455566778888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCccccccc
Q 009172 423 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 423 ~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
.|.+.|++.....+... .+.+ .-..++|...+.......+.+.|+..++.+.. .+
T Consensus 278 ~L~~i~g~~~~~~~~~~---~~~~-------~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~--------r~------- 332 (363)
T TIGR01437 278 ALNTLKGVSASIVQDEA---GRDI-------ARAEIRFDESELGMTAADVVQALRQGEPAIYT--------RG------- 332 (363)
T ss_pred HHhcCCCeEEEEecCCC---CCcC-------ceEEEEEeccCCCCCHHHHHHHHhcCCCCEEE--------ee-------
Confidence 99888876543222110 0000 11246666531112345566666543322211 01
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 503 LSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
.....+.+||++..-+ ++.++.|.++|.++
T Consensus 333 --------~~~~~~~~~l~~~~~~-~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 333 --------YKANEGIIEIDPRSVT-GGQLDIIVERIREI 362 (363)
T ss_pred --------eeecCCeEEEEeecCC-HHHHHHHHHHHHHh
Confidence 1234678999998655 66778888888753
No 144
>PRK07777 aminotransferase; Validated
Probab=99.90 E-value=2.6e-21 Score=204.98 Aligned_cols=282 Identities=16% Similarity=0.170 Sum_probs=183.1
Q ss_pred hhHHHHHHHHHHH----hCC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 210 PTTVVVEEKMSAL----EGA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 210 p~~~~Le~~LA~l----~g~----~-~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+...+|++.++++ +|. + +.+++++|++|+.+++.+++++||+|++..|.|+..... +...|.++..+
T Consensus 61 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~----~~~~g~~~~~~ 136 (387)
T PRK07777 61 PGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAV----IAMAGAHRVPV 136 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHH----HHHCCCEEEEe
Confidence 3466788888775 453 2 356666667999999999999999999999999886533 33446665554
Q ss_pred CC--------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc----ccc-
Q 009172 281 DP--------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ----KAL- 344 (541)
Q Consensus 281 d~--------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~----~~l- 344 (541)
+. .|++++++++++ ++++|++++|+||||.+++ +++|.++|+++++++|+|++|...... .++
T Consensus 137 ~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~ 215 (387)
T PRK07777 137 PLVPDGRGFALDLDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLA 215 (387)
T ss_pred ecCCccCCCcCCHHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHh
Confidence 32 478999998876 5999999999999999986 778899999999999999998643211 011
Q ss_pred ----ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH----HHHHHHHHHHHHH
Q 009172 345 ----SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM----KTLHLRVQQQNST 416 (541)
Q Consensus 345 ----~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l----~tl~~r~~~~~~n 416 (541)
..+.++++.|+||.++.+| ...|++++++++++.+...........+.....++...+ +.+....+...++
T Consensus 216 ~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 294 (387)
T PRK07777 216 TLPGMRERTVTISSAAKTFNVTG-WKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAK 294 (387)
T ss_pred hCCCCcCcEEEEeechhhccCcC-ceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 1346799999999998665 457899999999888876554333222222222222222 2233333455567
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-CHHHHHHHHHHc-CCCceeecCCCcccceec
Q 009172 417 ALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDAL-KIPYIAPSFGGCESIVDQ 494 (541)
Q Consensus 417 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g-~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~ 494 (541)
+..+.+.|+++ .+. +..| ..|.++|+.+++ +......|.+.| +..++.+..|..+...
T Consensus 295 ~~~l~~~L~~~-~~~-~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~-- 354 (387)
T PRK07777 295 RDRLAAGLAEA-GFE-VHDS----------------AGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDP-- 354 (387)
T ss_pred HHHHHHHHHhC-CCC-ccCC----------------CcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCC--
Confidence 77788888764 221 1111 134567777652 112345666666 3457777777543210
Q ss_pred CcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHH
Q 009172 495 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADV 534 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL 534 (541)
+ +-.+++|||+++. ..+++.+.+
T Consensus 355 ~----------------~~~~~~~Ri~~~~-~~~~l~~~l 377 (387)
T PRK07777 355 A----------------DAWNHLVRFAFCK-RDDTLDEAI 377 (387)
T ss_pred C----------------cCCCCeEEEEecC-CHHHHHHHH
Confidence 0 0124689999997 344443333
No 145
>PRK07683 aminotransferase A; Validated
Probab=99.90 E-value=3.2e-21 Score=204.55 Aligned_cols=276 Identities=14% Similarity=0.157 Sum_probs=181.5
Q ss_pred chhHHHHHHHHHHHh----CC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEE
Q 009172 209 NPTTVVVEEKMSALE----GA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~----g~----~-~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
.+...+||+.+++++ |. + +.++++++++|+.+++.+++++||+|+++.|+|..+... +...|+++.+
T Consensus 64 ~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~ 139 (387)
T PRK07683 64 NAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPI----IRLCGAKPVF 139 (387)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHH----HHHcCCEEEE
Confidence 455678888999887 32 2 345555556999999999999999999999999886543 3446888888
Q ss_pred eCCC------CHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc---c-cc-
Q 009172 280 IDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---A-LS- 345 (541)
Q Consensus 280 vd~~------dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~---~-l~- 345 (541)
++.+ |.+++++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... + ..
T Consensus 140 ~~~~~~~~~~~~~~l~~~~~~-~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 218 (387)
T PRK07683 140 IDTRSTGFRLTAEALENAITE-KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHF 218 (387)
T ss_pred eecCcccCCCCHHHHHHhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhc
Confidence 7642 56889998876 5899999999999999987 6788999999999999999987543211 1 11
Q ss_pred ---cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHHH
Q 009172 346 ---LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTAL 418 (541)
Q Consensus 346 ---~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~----tl~~r~~~~~~na~ 418 (541)
.+..+++.|+||.++.+| ...|++++++++++++...........+.....++...++ .+....++..+++.
T Consensus 219 ~~~~~~vi~~~s~SK~~~~pG-lRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 297 (387)
T PRK07683 219 PEMREKTIVINGLSKSHSMTG-WRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRD 297 (387)
T ss_pred cCCcCCeEEEeeccccccCcc-ceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 134689999999998555 4689999999999888765433233333333333333332 22222334456667
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHH-cCCCceeecCCCcccceecCcc
Q 009172 419 RMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA-LKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 419 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~-L~~~~iavS~G~~~sl~~~pa~ 497 (541)
.+.+.|.++ ++. +..| ..|.+++..+++.......+... ++..++.+..|..+.
T Consensus 298 ~~~~~l~~~-~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~------- 352 (387)
T PRK07683 298 YVYNRLISM-GLD-VEKP----------------TGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFS------- 352 (387)
T ss_pred HHHHHHHHc-CCc-ccCC----------------CeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhC-------
Confidence 777777764 221 1111 13445666665311112234333 445577666654321
Q ss_pred cccccCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009172 498 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 530 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edl 530 (541)
+..++++||+++. +.+++
T Consensus 353 --------------~~~~~~~Ri~~~~-~~~~~ 370 (387)
T PRK07683 353 --------------EYGEGYVRLSYAY-SIETL 370 (387)
T ss_pred --------------CCCCCeEEEEecC-CHHHH
Confidence 0125799999996 34433
No 146
>PRK09082 methionine aminotransferase; Validated
Probab=99.90 E-value=1.2e-21 Score=207.77 Aligned_cols=275 Identities=17% Similarity=0.137 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHhCC----C-cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC---
Q 009172 212 TVVVEEKMSALEGA----E-STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 212 ~~~Le~~LA~l~g~----~-~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
.+.+.+.+.+++|. + +.+++++|++|+.+++.+++.+||+|++++|.|......+ +..|.++..++.+
T Consensus 73 r~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~----~~~g~~~~~~~~~~~~ 148 (386)
T PRK09082 73 REAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAI----ELAGGRAVRVALQPPD 148 (386)
T ss_pred HHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHH----HHcCCEEEEEecCccc
Confidence 44455555556664 2 3444455569999999999999999999999999865433 3457777777642
Q ss_pred ---CHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc-----ccc---c-cCC
Q 009172 284 ---DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-----KAL---S-LGA 348 (541)
Q Consensus 284 ---dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~-----~~l---~-~ga 348 (541)
|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... ... . .+.
T Consensus 149 ~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~ 227 (386)
T PRK09082 149 FRVDWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRER 227 (386)
T ss_pred ccCCHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCc
Confidence 68899999987 5999999999999998864 778899999999999999997643221 111 1 235
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHHHH
Q 009172 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAEIL 424 (541)
Q Consensus 349 Divv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~----tl~~r~~~~~~na~~la~~L 424 (541)
.+++.|+||.++..| ...|++++++++++.++..........+.....++...++ .+....+...++...+.+.|
T Consensus 228 ~i~~~S~SK~~~~~G-~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L 306 (386)
T PRK09082 228 AFVVSSFGKTYHVTG-WKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAAL 306 (386)
T ss_pred EEEEeechhhccchh-hhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999998665 3579999999999888876644433444444433333333 22222334456677777888
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-CHHHHHHHHHHc-CCCceeecCCCcccceecCccccccc
Q 009172 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 425 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g-~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
+++ .+. + +| ...|.++|+.++. .......|.+.| +..++.+..|+.+..
T Consensus 307 ~~~-~~~-~-~~---------------~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~----------- 357 (386)
T PRK09082 307 ANS-RFK-L-LP---------------CEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYA----------- 357 (386)
T ss_pred HhC-CCc-c-cC---------------CCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCC-----------
Confidence 763 221 1 11 1134467888762 111234454443 445677766643211
Q ss_pred CCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009172 503 LSQSERLKYGIMDNLVRFSFGVEDFEDL 530 (541)
Q Consensus 503 ~~~~~~~~~gi~~~~IRlSvG~Ed~edl 530 (541)
.+...+++|||++. +.+++
T Consensus 358 --------~~~~~~~~Ri~~~~-~~~~l 376 (386)
T PRK09082 358 --------DPFPHRLVRLCFAK-QEETL 376 (386)
T ss_pred --------CCCCCCEEEEEecC-CHHHH
Confidence 01135799999997 44433
No 147
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=1.9e-21 Score=207.59 Aligned_cols=283 Identities=20% Similarity=0.185 Sum_probs=197.0
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHH
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~--~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle 286 (541)
++..++||++||+++|.+.+++++||++|+..++..+.+ +||.|++....|+.+...+ ...|.++..++..|++
T Consensus 89 ~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~----~~~g~~~~~~~~~d~~ 164 (406)
T PRK13393 89 NHYHVLLEAELADLHGKEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGI----RHSRAEKRIFRHNDPA 164 (406)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHH----HHcCCeEEEeCCCCHH
Confidence 457899999999999999999999999999999987765 7888888777787665443 2346677777777888
Q ss_pred HHHHhcc---CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCccc---------ccccCCcEEEEC
Q 009172 287 GLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHS 354 (541)
Q Consensus 287 ~Le~ai~---~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~---------~l~~gaDivv~S 354 (541)
++++.++ ++++++|++|+++|++|.+.|+++|.++|+++|+++|+|++++.++... ......|+++.|
T Consensus 165 ~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~t 244 (406)
T PRK13393 165 DLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGT 244 (406)
T ss_pred HHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEe
Confidence 8887764 2257899999999999999999999999999999999999986433110 111235888899
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHhCCC
Q 009172 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAEILEAHPK 429 (541)
Q Consensus 355 ~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~--~g~~~s~~~a~l~l~~l~tl~---~r~~~~~~na~~la~~L~~~p~ 429 (541)
++|.++.. ||++++++++++.++..... ++...++..++.+...++.+. .+.++..++.+++.+.|++. +
T Consensus 245 lsKa~g~~----GG~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 319 (406)
T PRK13393 245 LAKAFGVM----GGYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA-G 319 (406)
T ss_pred Cchhhccc----CceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-C
Confidence 99999964 48899999988888765432 344556665555555555432 23344556777888888763 2
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC-CceeecCCCcccceecCcccccccCCHHHH
Q 009172 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI-PYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 430 v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~-~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
. +.+ ++.|+++.+.+. +......+.+.|.. .++.++.+.. |.. +
T Consensus 320 ~-----~~~-------------~~~~~i~~v~~~-~~~~~~~l~~~L~~~~Gi~v~~~~~------p~~------p---- 364 (406)
T PRK13393 320 I-----PHL-------------PNPSHIVPVMVG-DPVLCKQISDELLDRYGIYVQPINY------PTV------P---- 364 (406)
T ss_pred C-----CcC-------------CCCCCeEEEEeC-CHHHHHHHHHHHHHhCCEEEEeECC------CCC------C----
Confidence 1 111 124668888764 33345666666644 3655554211 110 0
Q ss_pred HhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 509 LKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
...+.||||+...++++.++.+.++|+
T Consensus 365 ----~g~~~iRis~~~~~t~edid~l~~~l~ 391 (406)
T PRK13393 365 ----RGTERLRITPSPLHTDADIEHLVQALS 391 (406)
T ss_pred ----CCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 123689999987666666666666554
No 148
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.90 E-value=3.1e-21 Score=204.30 Aligned_cols=284 Identities=16% Similarity=0.145 Sum_probs=193.5
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHH
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~L 288 (541)
.+..+++++.+++++|.++.+++++|++++..++.+++++||+|+++++.|++....+ ...|.++..++..|++++
T Consensus 86 ~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~l 161 (397)
T PRK06939 86 QDLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGV----RLCKAKRYRYANNDMADL 161 (397)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHH----HhcCCceEEeCCCCHHHH
Confidence 3567899999999999888999999999999999999999999999999998865433 334566666666788888
Q ss_pred HHhccC---C--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCccc---------ccccCCcEEEEC
Q 009172 289 EAALNN---N--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------ALSLGADLVLHS 354 (541)
Q Consensus 289 e~ai~~---~--~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~---------~l~~gaDivv~S 354 (541)
++.+++ . ++++|++++..|++|.+.++++|.++|+++|++||+|++|..++... .+..+.|+++.|
T Consensus 162 ~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S 241 (397)
T PRK06939 162 EAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGT 241 (397)
T ss_pred HHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEE
Confidence 888753 1 58899998889999999999999999999999999999986432111 111256899999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHhCCC
Q 009172 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEAHPK 429 (541)
Q Consensus 355 ~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~--~~g~~~s~~~a~l~l~~l~tl---~~r~~~~~~na~~la~~L~~~p~ 429 (541)
+||+++|. .+|++++++++++.++.... .+++...+..++.+...++.+ ....++..++.+.+.+.|+++.
T Consensus 242 ~sK~~~g~---r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~- 317 (397)
T PRK06939 242 LGKALGGA---SGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAAG- 317 (397)
T ss_pred CHHHhCcc---CceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-
Confidence 99999654 37999999999888875432 223333444344334444433 2334555677777788887642
Q ss_pred ceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHH
Q 009172 430 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERL 509 (541)
Q Consensus 430 v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~ 509 (541)
+. + .+ +.++++.+.++. .....+|.+.|...++.+. ++.+ +.
T Consensus 318 ~~-~-~~----------------~~~~~~~~~~~~-~~~~~~~~~~L~~~gI~v~-~~~~-----~~------------- 359 (397)
T PRK06939 318 FT-L-GP----------------GEHPIIPVMLGD-AKLAQEFADRLLEEGVYVI-GFSF-----PV------------- 359 (397)
T ss_pred CC-c-CC----------------CCCCEEEEEECC-HHHHHHHHHHHHHCCceEe-eeCC-----CC-------------
Confidence 11 1 11 134566666643 2345567777655566665 2211 10
Q ss_pred hcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009172 510 KYGIMDNLVRFSFGVE----DFEDLKADVLQALH 539 (541)
Q Consensus 510 ~~gi~~~~IRlSvG~E----d~edli~dL~~AL~ 539 (541)
.+-..+.||++++.. +.++.++.|.++++
T Consensus 360 -~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~ 392 (397)
T PRK06939 360 -VPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGK 392 (397)
T ss_pred -CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 001236899998763 34445555555544
No 149
>PRK14012 cysteine desulfurase; Provisional
Probab=99.90 E-value=2.9e-22 Score=213.61 Aligned_cols=300 Identities=18% Similarity=0.202 Sum_probs=192.9
Q ss_pred chhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh----ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~al----l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+..+++|+.+|+++|++ +++++++|++++.+++.++ .++||+|++++.+|+++...+.. ++..|+++++++.
T Consensus 48 ~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~-~~~~g~~~~~v~~ 126 (404)
T PRK14012 48 EEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQ-LEREGFEVTYLDP 126 (404)
T ss_pred HHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHH-HHhCCCEEEEEcc
Confidence 356788999999999974 3677777789999888766 37899999999999887665533 3456888888864
Q ss_pred -----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc-ccccccCCcEEEECCc
Q 009172 283 -----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSAT 356 (541)
Q Consensus 283 -----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~-~~~l~~gaDivv~S~s 356 (541)
.|+++|++++++ ++++|++++++||||.+.|+++|.++|+++|+++++|++++.+.. .+....++|++++|++
T Consensus 127 ~~~g~~d~~~l~~~i~~-~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~ 205 (404)
T PRK14012 127 QSNGIIDLEKLEAAMRD-DTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAH 205 (404)
T ss_pred CCCCcCCHHHHHHhcCC-CCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehh
Confidence 279999999987 499999999999999999999999999999999999999876543 3445668999999999
Q ss_pred cccCCCCCceEEEEEeChHHHHHHHHHhh-------hcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHH
Q 009172 357 KFIGGHNDVLAGSISGSGKLVTQIRNLHH-------VLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAEILE 425 (541)
Q Consensus 357 K~lgg~g~v~gG~vv~~~~li~~l~~~~~-------~~g~~~s~~~a~l~l~~l~t----l~~r~~~~~~na~~la~~L~ 425 (541)
|.+|++| .|++++.++. ..++..... ...++.+..........++. .....++..+.++++.+.|+
T Consensus 206 K~~gp~g--~G~l~~~~~~-~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~ 282 (404)
T PRK14012 206 KIYGPKG--IGALYVRRKP-RVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIK 282 (404)
T ss_pred hccCCCc--eEEEEEecCC-CCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 9887655 3444444432 222211100 01112222111111122222 23334555666777777777
Q ss_pred hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccc-eecCcccccccCC
Q 009172 426 AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI-VDQPAIMSYWDLS 504 (541)
Q Consensus 426 ~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl-~~~pa~~~~~~~~ 504 (541)
+.+.+. +..+.-... .....++|.+.+. ..++..|+ +++++.|..+.. ..+|.
T Consensus 283 ~~~~i~-~~~~~~~~~-----------~~~~~~~~~~~~~----~~~~~~l~--~~~i~~g~~~~~~~~~~~-------- 336 (404)
T PRK14012 283 DIEEVY-LNGDLEQRV-----------PGNLNVSFNYVEG----ESLIMALK--DLAVSSGSACTSASLEPS-------- 336 (404)
T ss_pred cCCCEE-EeCCccccC-----------CCEEEEEEeCcCH----HHHHHhCC--CeEEEchhhhCCCCCCCC--------
Confidence 777654 211100000 0122456665321 24556665 567776644321 11111
Q ss_pred HHHHHhcCC----CCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 505 QSERLKYGI----MDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 505 ~~~~~~~gi----~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
.....+|+ ..+.||||++..++++.++.+.++|++
T Consensus 337 -~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~ 375 (404)
T PRK14012 337 -YVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRK 375 (404)
T ss_pred -HHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 11122443 357999999997777666666666653
No 150
>PRK08363 alanine aminotransferase; Validated
Probab=99.90 E-value=2.6e-21 Score=205.87 Aligned_cols=287 Identities=14% Similarity=0.101 Sum_probs=181.4
Q ss_pred chhHHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 209 NPTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~--------~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.+...+||++++++++. ++.++++++++|+.+++.+++++||+|++++|+|......+ ...|..+..+
T Consensus 69 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~v~~ 144 (398)
T PRK08363 69 SEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLV----KFYGGVPVEY 144 (398)
T ss_pred CCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCEEEEe
Confidence 45678899999998731 24455555679999999999999999999999999866433 3446555444
Q ss_pred -CC------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc----cc--
Q 009172 281 -DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL-- 344 (541)
Q Consensus 281 -d~------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~----~l-- 344 (541)
+. .|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... ..
T Consensus 145 ~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~ 223 (398)
T PRK08363 145 RTIEEEGWQPDIDDIRKKITE-KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSL 223 (398)
T ss_pred ccccccCCcCCHHHHHhhCCc-ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHc
Confidence 21 368889998876 5899999999999999998 7889999999999999999986532111 11
Q ss_pred -ccCCcEEEECCccccCCCCCceEEEEEe--ChHHHHHHHHHhhhc---CCCccHHHHHHHHHhH----HHHHHHHHHHH
Q 009172 345 -SLGADLVLHSATKFIGGHNDVLAGSISG--SGKLVTQIRNLHHVL---GGALNPNAAYLIIRGM----KTLHLRVQQQN 414 (541)
Q Consensus 345 -~~gaDivv~S~sK~lgg~g~v~gG~vv~--~~~li~~l~~~~~~~---g~~~s~~~a~l~l~~l----~tl~~r~~~~~ 414 (541)
.....+++.|+||.++.+| ...|++++ ++++++.+....... ....+.....++...+ +.+....++..
T Consensus 224 ~~~~~vi~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~ 302 (398)
T PRK08363 224 TKDVPVIVMNGLSKVYFATG-WRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLK 302 (398)
T ss_pred CcCCcEEEEecchhccCCcc-ceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 1123477899999987666 45788876 666766665433211 1223333333333333 23334445566
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHH-HHcCCCceeecCCCcccce
Q 009172 415 STALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFI-DALKIPYIAPSFGGCESIV 492 (541)
Q Consensus 415 ~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-~~~~~~~l-~~L~~~~iavS~G~~~sl~ 492 (541)
++...+.+.|++++.+. +..|. .|.++++.+++. ......++ ..++..++.+..|..+..
T Consensus 303 ~~~~~l~~~L~~~~~~~-~~~p~----------------g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~- 364 (398)
T PRK08363 303 ERRDYIYKRLNEIPGIS-TTKPQ----------------GAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGE- 364 (398)
T ss_pred HHHHHHHHHHhcCCCCE-ecCCC----------------eEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCC-
Confidence 77777888887765542 32221 233455577641 00112232 334555666666543210
Q ss_pred ecCcccccccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHh
Q 009172 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALH 539 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL~~AL~ 539 (541)
..+++||||++.. +.++.++.|.+.+.
T Consensus 365 --------------------~~~~~iRis~~~~~~~l~~~l~~l~~~~~ 393 (398)
T PRK08363 365 --------------------YGAGHFRLVFLPPVEILEEAMDRFEEFMR 393 (398)
T ss_pred --------------------CCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1257999999853 23334444444443
No 151
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.90 E-value=1.5e-21 Score=202.81 Aligned_cols=269 Identities=19% Similarity=0.229 Sum_probs=177.5
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCH
Q 009172 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dl 285 (541)
+|+.+. ..|+++|++++|.++.++++++.+++.+++ .+.+||+|++++|+|+... ..++..|+++..++.
T Consensus 46 ~yp~~~-~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~----~~~~~~g~~~~~v~~--- 115 (330)
T PRK05664 46 RLPETD-DGLEAAARAYYGAPQLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHA----HAWRRAGHQVRELDE--- 115 (330)
T ss_pred hCCCCh-HHHHHHHHHHhCCCCEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHH----HHHHHcCCeEEEech---
Confidence 455555 799999999999875555554458988775 3589999999999998865 345567899888875
Q ss_pred HHHHHhccCCCeeEEEEeCCCCCCCcccCHH---HHHHHHHhCCCEEEEEcCCCCCCccc---cc-ccCCcEEEECCccc
Q 009172 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQK---AL-SLGADLVLHSATKF 358 (541)
Q Consensus 286 e~Le~ai~~~~tklV~lesp~NPtG~v~di~---~Ia~la~~~gillvvDea~a~~~~~~---~l-~~gaDivv~S~sK~ 358 (541)
++++++++ +++++++++||||||.+++.+ +|+++|+++|++||+||+|....... .+ ....-+++.|+||.
T Consensus 116 ~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~ 193 (330)
T PRK05664 116 AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKF 193 (330)
T ss_pred hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeecccc
Confidence 45666664 378999999999999999855 55556688999999999986543211 11 11234899999999
Q ss_pred cCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHhCCCceEEeC
Q 009172 359 IGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEILEAHPKVKRVHY 435 (541)
Q Consensus 359 lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---l~~r~~~~~~na~~la~~L~~~p~v~~V~~ 435 (541)
+|.+| ...||+++++++++.+......++ .+....+++...+.. .....++..++++.+.+.|+++. +.
T Consensus 194 ~gl~G-lRiG~~v~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~---- 265 (330)
T PRK05664 194 FGLAG-ARLGFVLAEPALLRALAELLGPWT--VSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHG-LT---- 265 (330)
T ss_pred ccCCC-cceEEEEeCHHHHHHHHHhcCCCC--CCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCC-Cc----
Confidence 98665 457999999999998887654332 334433444444432 23334445566777888887752 10
Q ss_pred CCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCC
Q 009172 436 PGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 515 (541)
Q Consensus 436 Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~ 515 (541)
|. .+.+.++++.++ + ...+.+.|...++.+.. + + ..
T Consensus 266 ~~--------------~~~~~f~~~~~~-~---~~~~~~~l~~~gi~v~~---f----------------------~-~~ 301 (330)
T PRK05664 266 PA--------------GGCALFQWVRTE-D---AAALHEFLARRGILTRL---F----------------------E-QP 301 (330)
T ss_pred cc--------------CCcceEEEEecC-C---HHHHHHHHHHCCeEEEE---C----------------------C-CC
Confidence 10 123457777764 2 23445555545655531 0 0 13
Q ss_pred CeEEEEecC--CCHHHHHHHHHHHH
Q 009172 516 NLVRFSFGV--EDFEDLKADVLQAL 538 (541)
Q Consensus 516 ~~IRlSvG~--Ed~edli~dL~~AL 538 (541)
++||||+|. ++.+++++.|++..
T Consensus 302 ~~iRis~~~~~~~~~~l~~al~~~~ 326 (330)
T PRK05664 302 ASLRFGLPADEADWARLDQALLAYR 326 (330)
T ss_pred CeEEEECCCCHHHHHHHHHHHHHHH
Confidence 689999994 34555555555443
No 152
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=1.5e-21 Score=211.94 Aligned_cols=290 Identities=14% Similarity=0.176 Sum_probs=185.2
Q ss_pred CCCCch-hHHHHHHHHHHHhC--------C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009172 205 GRYGNP-TTVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~g--------~-~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~ 273 (541)
.+|+++ ...+|+++||++++ . .+.|++++|+ +++..++.++++|||.|++++|.|.+....+. ...
T Consensus 80 ~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~---~~~ 156 (468)
T PLN02450 80 ALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLK---WRT 156 (468)
T ss_pred hcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHh---hcC
Confidence 445554 45678999998874 1 2346666665 89999999999999999999999988653321 135
Q ss_pred CcEEEEeCCC-------CHHHHHHhccC-----CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCC
Q 009172 274 GITATVIDPA-------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 338 (541)
Q Consensus 274 Gi~v~~vd~~-------dle~Le~ai~~-----~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~ 338 (541)
|+++..++.+ |++++++++++ .++|+|++++|+||||.+++ +++|.++|+++|++||+||+|+..
T Consensus 157 g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~ 236 (468)
T PLN02450 157 GVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGT 236 (468)
T ss_pred CcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcccccc
Confidence 7777776531 56888887753 25899999999999999998 457788889999999999998753
Q ss_pred Ccc-----ccc------------ccCCcEEEECCccccCCCCCceEEEEEeChH-HHHHHHHHhhhcCCCccHHHHHHHH
Q 009172 339 LNQ-----KAL------------SLGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHVLGGALNPNAAYLII 400 (541)
Q Consensus 339 ~~~-----~~l------------~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~-li~~l~~~~~~~g~~~s~~~a~l~l 400 (541)
... ..+ ....-+++.|+||.++.+| ...|+++++++ +++.+.... .++. .+.....++.
T Consensus 237 ~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~G-lRiG~li~~~~~l~~~~~~~~-~~~~-~s~~~Q~a~~ 313 (468)
T PLN02450 237 VFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPG-FRVGAIYSNDEMVVSAATKMS-SFGL-VSSQTQYLLS 313 (468)
T ss_pred ccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCC-ccEEEEEECCHHHHHHHHHHh-hcCC-CCHHHHHHHH
Confidence 211 111 1223588999999998555 35788888754 455555443 2232 3444444433
Q ss_pred HhHHH-------HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-----HHH
Q 009172 401 RGMKT-------LHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LTA 468 (541)
Q Consensus 401 ~~l~t-------l~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-----~~~ 468 (541)
..++. +....++..+..+.+.+.|+++ ++. +..| ..|.++|+.++.. .+.
T Consensus 314 ~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~-~~~~----------------~~g~flwi~l~~~~~~~~~~~ 375 (468)
T PLN02450 314 ALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIK-CLKS----------------NAGLFCWVDMRHLLKSNTFEA 375 (468)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCC----------------CceEEEEEEchHhcCcCCchH
Confidence 33322 3333455556677777888775 331 1111 1345789988621 112
Q ss_pred HHHHHHHc-CCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHHHHHh
Q 009172 469 TIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED---FEDLKADVLQALH 539 (541)
Q Consensus 469 ~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed---~edli~dL~~AL~ 539 (541)
..++.+.+ +..++.+..|..+.. ..++++||+++..+ .++.++.|.+++.
T Consensus 376 ~~~l~~~ll~~~gV~v~PG~~f~~---------------------~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~ 429 (468)
T PLN02450 376 EMELWKKIVYEVKLNISPGSSCHC---------------------TEPGWFRVCFANMSEETLDLAMKRLKSFVE 429 (468)
T ss_pred HHHHHHHHHHhCCEEEeCccccCC---------------------CCCCEEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 23344443 345777777754310 12579999999533 3445556666554
No 153
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.90 E-value=2.1e-21 Score=209.95 Aligned_cols=284 Identities=17% Similarity=0.195 Sum_probs=197.0
Q ss_pred hhHHHHHHHHHHHh----CC---CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 210 PTTVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g~---~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
.....|++.|+++. |. .+.|+.|+|+ +|+.++++.+++|||.|++.+|+|.+... .++..|+++..++
T Consensus 132 ~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~----~~~~~g~~~~~vp 207 (459)
T COG1167 132 AGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ----ALEALGARVIPVP 207 (459)
T ss_pred CCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH----HHHHcCCcEEecC
Confidence 34556666666654 32 2456666666 99999999999999999999999998764 4555678877775
Q ss_pred C----CCHHHHHHhccCCCeeEEEEeCCC--CCCCcccCHH---HHHHHHHhCCCEEEEEcCCCCCCcc-cc-------c
Q 009172 282 P----ADMEGLEAALNNNNVSLFFTESPT--NPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQ-KA-------L 344 (541)
Q Consensus 282 ~----~dle~Le~ai~~~~tklV~lesp~--NPtG~v~di~---~Ia~la~~~gillvvDea~a~~~~~-~~-------l 344 (541)
. .|+|+|++.++.+++|++|+ +|+ ||||.+++.+ +|.++|++||+++|+|+.|+..... .+ .
T Consensus 208 ~d~~G~~~e~le~~~~~~~~k~~y~-~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld 286 (459)
T COG1167 208 VDEDGIDPEALEEALAQWKPKAVYV-TPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALD 286 (459)
T ss_pred CCCCCCCHHHHHHHHhhcCCcEEEE-CCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhC
Confidence 4 37999999998767999998 554 9999999966 9999999999999999997754321 11 1
Q ss_pred ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHH----Hh-HHHHHHHHHHHH-HHHH
Q 009172 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLII----RG-MKTLHLRVQQQN-STAL 418 (541)
Q Consensus 345 ~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l----~~-l~tl~~r~~~~~-~na~ 418 (541)
..+..|++.||||.+.+.- ..||+++++++++++...........+.+....+. .| ++..-.++++.. +..+
T Consensus 287 ~~~rViy~gSFSK~l~Pgl--RlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~ 364 (459)
T COG1167 287 APGRVIYLGSFSKTLAPGL--RLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRD 364 (459)
T ss_pred CCCCEEEEeeehhhccccc--ceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 2356799999999999775 67999999999999887766555555554422222 22 333333444333 5556
Q ss_pred HHHHHHHhC-CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC-CCcccceecCc
Q 009172 419 RMAEILEAH-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF-GGCESIVDQPA 496 (541)
Q Consensus 419 ~la~~L~~~-p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~-G~~~sl~~~pa 496 (541)
.+.+.|+++ +....+..|. .|-++|++++.+ .+...++......++.+.. |..+..-
T Consensus 365 ~l~~~L~~~~~~~~~~~~p~----------------gG~flwl~l~~~-~~~~~l~~~a~~~gv~i~~~g~~f~~~---- 423 (459)
T COG1167 365 ALLEALAEYLPELATWTRPE----------------GGLFLWLELPEG-IDARELLAAALEKGVVVTPLGSAFSAD---- 423 (459)
T ss_pred HHHHHHHHhCCCCeeeecCC----------------ceEEEEEEcCCC-CCHHHHHHHHHHCCCEEEcCCccccCC----
Confidence 677788776 3343444442 467889999864 2345666666555666665 5443210
Q ss_pred ccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHH
Q 009172 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQ 536 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~ 536 (541)
+-..+.+||+++..+.+++.+.++.
T Consensus 424 ---------------~~~~~~~Rl~~s~~~~e~i~~gi~~ 448 (459)
T COG1167 424 ---------------GDPRNGLRLSFSSPSEEEIEEGIKR 448 (459)
T ss_pred ---------------CCCCCeEEEEcCCCCHHHHHHHHHH
Confidence 0034689999998777666555553
No 154
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=8.2e-22 Score=205.25 Aligned_cols=271 Identities=17% Similarity=0.217 Sum_probs=184.1
Q ss_pred CCCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 203 EYGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.+.+|+.+....||+++++++|.+ +.|++++|+ +++..++..+ +||+|+++.|+|.... ...+..|+++..+
T Consensus 48 ~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~----~~~~~~g~~~~~v 121 (337)
T PRK03967 48 PFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGKHIVITPPTFGMYS----FYAKLNGIPVIDV 121 (337)
T ss_pred ccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCCeEEEeCCChHHHH----HHHHHcCCeEEEe
Confidence 356777777899999999999863 556666665 8888777665 7999999999997533 3345568888777
Q ss_pred CC-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccc---c-ccCCcEE
Q 009172 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---L-SLGADLV 351 (541)
Q Consensus 281 d~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~---l-~~gaDiv 351 (541)
+. .|++.+++++. +++++++++|+||||.+++.++|.++++ +++++|+|++|........ . .....++
T Consensus 122 ~~~~~~~~d~~~l~~~~~--~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~ 198 (337)
T PRK03967 122 PLKEDFTIDGERIAEKAK--NASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLIL 198 (337)
T ss_pred ecCCCCCcCHHHHHHhcc--CCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEE
Confidence 53 36788887653 4889999999999999999999999995 6999999999875422111 1 1123588
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCC
Q 009172 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAHP 428 (541)
Q Consensus 352 v~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~---tl~~r~~~~~~na~~la~~L~~~p 428 (541)
+.|+||.++-+| ...|++++++++++.++.....++ .+.....++...++ .+..+.+...+++..+.+.|.++
T Consensus 199 l~S~SK~~~l~G-lRiG~iv~~~~~i~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~- 274 (337)
T PRK03967 199 LRTFSKAFGLAG-IRAGYAIANEEIIDALYRIKPPFS--LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY- 274 (337)
T ss_pred EecchHhhcchh-hhheeeecCHHHHHHHHhhcCCCC--CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 999999998555 457999999999988887654432 34444444443333 33334445555666666666542
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHH
Q 009172 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
.+| +.+..+++.++ +.+.|...++.+..++
T Consensus 275 -----~~~----------------~~~~~~~~~~~--------~~~~l~~~gi~v~~~~--------------------- 304 (337)
T PRK03967 275 -----AYP----------------SDANFLLLKLD--------AYDYLLENGIVVRKLS--------------------- 304 (337)
T ss_pred -----cCC----------------CCCcEEEEhHH--------HHHHHHHCCEEEEeCC---------------------
Confidence 122 14667777663 2233333355554211
Q ss_pred HhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009172 509 LKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 539 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~-Ed~edli~dL~~AL~ 539 (541)
+...+++||+++. ++.+.+++.|++.++
T Consensus 305 ---~~~~~~~Ri~~~~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 305 ---GRLEGHIRVTVGKREENDEFIKALKEIKE 333 (337)
T ss_pred ---CCCCCeEEEecCCHHHHHHHHHHHHHHHH
Confidence 0125699999997 456777777776654
No 155
>PRK08175 aminotransferase; Validated
Probab=99.90 E-value=1.6e-21 Score=207.27 Aligned_cols=278 Identities=15% Similarity=0.149 Sum_probs=181.5
Q ss_pred hHHHHHHHHHHHh----CC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 211 TTVVVEEKMSALE----GA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~----~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+|++++++++ |. ++.+++++|+ +++..++..+++|||+|++++|+|......+ ...|+++..++
T Consensus 68 G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~ 143 (395)
T PRK08175 68 GIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGA----VIAGAQVRSVP 143 (395)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH----HHcCCeEEEEe
Confidence 3667888888765 32 2246666665 8999999999999999999999998855333 34577777765
Q ss_pred CC----CHHHHHHhccC--CCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEEcCCCCCCcc----cc---cc
Q 009172 282 PA----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ----KA---LS 345 (541)
Q Consensus 282 ~~----dle~Le~ai~~--~~tklV~lesp~NPtG~v~di---~~Ia~la~~~gillvvDea~a~~~~~----~~---l~ 345 (541)
.+ +.++++++++. .++++|++++|+||||.+++. ++|.++|+++|+++|+|++|...... .+ +.
T Consensus 144 ~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~ 223 (395)
T PRK08175 144 LVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVP 223 (395)
T ss_pred cccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCC
Confidence 42 47788887763 258999999999999999997 68888999999999999997643211 11 11
Q ss_pred --cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHH
Q 009172 346 --LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALR 419 (541)
Q Consensus 346 --~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t----l~~r~~~~~~na~~ 419 (541)
.+..+++.|+||.+|.+| ...||+++++++++.+.+.........+......+...++. +....+...+++..
T Consensus 224 ~~~~~~i~~~S~SK~~g~pG-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (395)
T PRK08175 224 GAKDVAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDV 302 (395)
T ss_pred CcccCEEEEeeccccccCcc-hhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 123477899999998666 34689999999999888766543333222232222233321 22333444566677
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHH--HHHHHHHHc-CCCceeecCCCcccceecCc
Q 009172 420 MAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT--ATIKFIDAL-KIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 420 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~--~~~~~l~~L-~~~~iavS~G~~~sl~~~pa 496 (541)
+.+.|++++ + .+..| ..|.++|++++.... ....|...+ +..++.+..|..+..
T Consensus 303 ~~~~L~~~~-~-~~~~p----------------~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~----- 359 (395)
T PRK08175 303 LVKGLHEAG-W-MVEMP----------------KASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGD----- 359 (395)
T ss_pred HHHHHHHcC-C-cccCC----------------CEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCc-----
Confidence 778887652 2 12222 157789999975311 234555543 445777766543210
Q ss_pred ccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHH
Q 009172 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKAD 533 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~d 533 (541)
..++++||+++. +.+.+.+.
T Consensus 360 ----------------~~~~~lRis~~~-~~~~~~~a 379 (395)
T PRK08175 360 ----------------YGDTHVRFALIE-NRDRIRQA 379 (395)
T ss_pred ----------------CCCCeEEEEeCC-CHHHHHHH
Confidence 124689999984 44443333
No 156
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.90 E-value=6.3e-22 Score=207.05 Aligned_cols=283 Identities=16% Similarity=0.167 Sum_probs=190.3
Q ss_pred chhHHHHHHHHHHHhCCC-c-EEEeCCHHHHHHHHHHHhc----cCC-CEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 209 NPTTVVVEEKMSALEGAE-S-TVIMASGMSASTVMLLALV----PAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~-~-~i~~sSG~~Ai~~al~all----~~G-D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
....++++++|++++|.+ + .+++++++++++.++.++. ++| ++|+++..+|++....+. .++..|++++.++
T Consensus 41 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~-~~~~~G~~v~~v~ 119 (353)
T TIGR03235 41 KKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIR-ALERNGFTVTYLP 119 (353)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHH-HHHhcCCEEEEEc
Confidence 345788999999999974 3 4444455689998888775 356 789999999988766653 3456699988886
Q ss_pred C-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEECC
Q 009172 282 P-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSA 355 (541)
Q Consensus 282 ~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~S~ 355 (541)
. .|++++++++++ ++++|++++++||||.+.|+++|.++|+++|+++++|++++.+. ..+....++|+++.|+
T Consensus 120 ~~~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~ 198 (353)
T TIGR03235 120 VDESGRIDVDELADAIRP-DTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSG 198 (353)
T ss_pred cCCCCcCCHHHHHHhCCC-CCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeeh
Confidence 4 378999999987 48999999999999999999999999999999999999977653 3444567899999999
Q ss_pred ccccCCCCCceEEEEEeChHHHHH--HHHHh-------hhcCCCccHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHH
Q 009172 356 TKFIGGHNDVLAGSISGSGKLVTQ--IRNLH-------HVLGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAE 422 (541)
Q Consensus 356 sK~lgg~g~v~gG~vv~~~~li~~--l~~~~-------~~~g~~~s~~~a~l~l~~l~t----l~~r~~~~~~na~~la~ 422 (541)
+|+++++| .|+++.+++.... ++... ....++.+....+.+..+++. ++.+.+++.+.+..+.+
T Consensus 199 ~K~~gp~g---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~ 275 (353)
T TIGR03235 199 HKIYGPKG---IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRD 275 (353)
T ss_pred hhcCCCCc---eEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99987665 5777777654322 11110 011223333222222333332 23444556666677777
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCccccccc
Q 009172 423 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWD 502 (541)
Q Consensus 423 ~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~ 502 (541)
.|++ ++++-+..+. ....++++|.+++- ..+.+...|+. +++++.|..++. . ..
T Consensus 276 ~l~~-~g~~~~~~~~--------------~~~~~i~~~~~~~~--~~~~v~~~L~~-~i~v~~g~~~~~----~----~~ 329 (353)
T TIGR03235 276 ALQT-LGVKLNGDPA--------------ETIPHILNFSIDGV--NSEALIVNLRA-DAAVSTGSACSS----S----KY 329 (353)
T ss_pred Hhcc-CCeEEeCCcc--------------cccCCEEEEEeCCc--CHHHHHHHHhC-CeEEEchhhcCC----C----CC
Confidence 7765 5553221111 11356888988752 23455556654 788888765421 1 11
Q ss_pred CCHHHHHhcCCCC----CeEEEEe
Q 009172 503 LSQSERLKYGIMD----NLVRFSF 522 (541)
Q Consensus 503 ~~~~~~~~~gi~~----~~IRlSv 522 (541)
-+...+.++|+++ +.||+|+
T Consensus 330 ~~~~~l~~~g~~~~~~~~~~r~s~ 353 (353)
T TIGR03235 330 EPSHVLQAMGLDTDRARGAIRFSW 353 (353)
T ss_pred CCCHHHHHcCCCHHHhCccEEEeC
Confidence 1235678888864 8899985
No 157
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.90 E-value=3.4e-21 Score=205.48 Aligned_cols=284 Identities=19% Similarity=0.184 Sum_probs=195.1
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCH
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~--~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dl 285 (541)
.++...+|+++||+++|.++.++++||++|+..++..+.. +++.|+.....|.+....+ +..++++..++..|+
T Consensus 89 ~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~----~~~~~~~~~~~~~d~ 164 (407)
T PRK09064 89 TNHYHVELERELADLHGKEAALVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGI----RRSRCEKHIFRHNDV 164 (407)
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHH----HHcCCcEEEECCCCH
Confidence 4788999999999999988899999999998888887654 7777777666666544322 334666666777788
Q ss_pred HHHHHhccC---CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc-------c--ccccCCcEEEE
Q 009172 286 EGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------K--ALSLGADLVLH 353 (541)
Q Consensus 286 e~Le~ai~~---~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~-------~--~l~~gaDivv~ 353 (541)
+++++.++. .++++|++++|+||+|.+.|+++|.++|+++|++||+||+|+.+... . ......|+++.
T Consensus 165 ~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~ 244 (407)
T PRK09064 165 AHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEG 244 (407)
T ss_pred HHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEE
Confidence 888887752 25899999999999999999999999999999999999998643211 0 11123589999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhhh--cCCCccHHHHHHHHHhHHHHHH---HHHHHHHHHHHHHHHHHhCC
Q 009172 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMKTLHL---RVQQQNSTALRMAEILEAHP 428 (541)
Q Consensus 354 S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~--~g~~~s~~~a~l~l~~l~tl~~---r~~~~~~na~~la~~L~~~p 428 (541)
|++|.+|.. ||++++++++++.++..... +....++..+..++..++.+.. ..++..++.+++.+.|++..
T Consensus 245 t~sKa~g~~----GG~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g 320 (407)
T PRK09064 245 TLAKAFGVM----GGYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAG 320 (407)
T ss_pred ecchhhhcc----CceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999865 48899999988887754432 2334556666666666665432 24556677888888887641
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCCcccceecCcccccccCCHHH
Q 009172 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGGCESIVDQPAIMSYWDLSQSE 507 (541)
Q Consensus 429 ~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~-~~~iavS~G~~~sl~~~pa~~~~~~~~~~~ 507 (541)
+ +.++ ..++++.|.+++ ......+.+.|. ..++.+.... .|.. +
T Consensus 321 -~-----~~~~-------------~~~~iv~i~~~~-~~~~~~l~~~L~~~~gi~v~~~~------~p~~------~--- 365 (407)
T PRK09064 321 -I-----PVMP-------------NESHIVPVMVGD-PEKCKKASDMLLEEHGIYVQPIN------YPTV------P--- 365 (407)
T ss_pred -C-----CCCC-------------CCCCEEEEEeCC-HHHHHHHHHHHHHhCCEEEeeEC------CCCC------C---
Confidence 1 1111 135688888753 234556666653 3355554311 1110 0
Q ss_pred HHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 508 RLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 508 ~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
...+.||||++..++++.++.+.++|+
T Consensus 366 -----~~~~~lRis~~~~~t~edi~~l~~~l~ 392 (407)
T PRK09064 366 -----RGTERLRITPTPFHTDEMIDHLVEALV 392 (407)
T ss_pred -----CCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 123579999997766666666655554
No 158
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.2e-21 Score=205.27 Aligned_cols=275 Identities=14% Similarity=0.131 Sum_probs=178.3
Q ss_pred CCCchhHHHHHHHHHHHhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC-
Q 009172 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP- 282 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~-~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~- 282 (541)
+|+++....|++.||++++. .+.|++++|+ +++.+++++++++||+|++++|+|..... .....|..+..++.
T Consensus 61 ~Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~----~~~~~g~~~~~~~l~ 136 (357)
T PRK14809 61 SYPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGM----SARYHHGEVREYPVS 136 (357)
T ss_pred cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH----HHHHcCCeEEEEecc
Confidence 34556678999999999986 3456666665 89999999999999999999999975432 22334555554432
Q ss_pred ------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEEcCCCCCCcccc----c-ccCCc
Q 009172 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLNQKA----L-SLGAD 349 (541)
Q Consensus 283 ------~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~--gillvvDea~a~~~~~~~----l-~~gaD 349 (541)
.+.+++++.+. ++|+|++++|+||||.+++.+++.++++.. +++||+||+|........ . .....
T Consensus 137 ~~~~~~~~~~~~~~~~~--~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~v 214 (357)
T PRK14809 137 KADDFEQTADTVLDAYD--GERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDV 214 (357)
T ss_pred cCcCCCcCHHHHHHhhc--CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCE
Confidence 14566666543 379999999999999999988777777653 789999999875432111 1 12345
Q ss_pred EEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHh
Q 009172 350 LVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMAEILEA 426 (541)
Q Consensus 350 ivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---l~~r~~~~~~na~~la~~L~~ 426 (541)
+++.|+||.++.+| +..|++++++++++++.+....+ ..+.....++...+.. +....+...++.+.+.+.|..
T Consensus 215 i~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 291 (357)
T PRK14809 215 AVLRTFSKAYGLAG-LRLGYAVVPEEWADAYARVNTPF--AASELACRAGLAALDDDEHVERTVETARWAREYIREELDA 291 (357)
T ss_pred EEEecchhHhcCcc-hhheeeecCHHHHHHHHHhCCCC--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88899999998655 35799999999998887754322 3445544444444432 222223333344444454432
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHH
Q 009172 427 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQS 506 (541)
Q Consensus 427 ~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~ 506 (541)
. .+| ..|+++++++++ ..+|.+.+...++.+..|..+
T Consensus 292 ~------~~~----------------~~g~f~~~~~~~----~~~~~~~l~~~gv~v~~g~~f----------------- 328 (357)
T PRK14809 292 P------TWE----------------SAGNFVLAEVGD----ASAVAEAAQERGVIVRDCTSF----------------- 328 (357)
T ss_pred c------cCC----------------CCCCEEEEECCC----HHHHHHHHHHCCEEEEECccC-----------------
Confidence 1 112 256788998852 234555555557777665432
Q ss_pred HHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 009172 507 ERLKYGIMDNLVRFSFGV-EDFEDLKADVLQAL 538 (541)
Q Consensus 507 ~~~~~gi~~~~IRlSvG~-Ed~edli~dL~~AL 538 (541)
| .+++|||+++. ++.++.++.|.+++
T Consensus 329 -----~-~~~~iRls~~~~~~~~~~l~~L~~~l 355 (357)
T PRK14809 329 -----G-LPECIRITCGTREETERAVEVLNEVL 355 (357)
T ss_pred -----C-CCCeEEEecCCHHHHHHHHHHHHHHh
Confidence 1 13689999984 34455555555544
No 159
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.90 E-value=2e-21 Score=203.66 Aligned_cols=281 Identities=16% Similarity=0.198 Sum_probs=190.0
Q ss_pred CCCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
..+|+++...+||+++|++++.+ +.|++++|+ +++..++.++ .+ +.|+++.|+|+.... .++..|.++..++
T Consensus 48 ~~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~----~~~~~g~~~~~~~ 121 (354)
T PRK06358 48 LVEYPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT-KP-KKVLILAPTFAEYER----ALKAFDAEIEYAE 121 (354)
T ss_pred hhcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh-CC-CcEEEecCChHHHHH----HHHHcCCeeEEEe
Confidence 34567777789999999999863 456666665 8998888875 44 689999999987543 3445677776664
Q ss_pred C-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc----cc---
Q 009172 282 P-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL--- 344 (541)
Q Consensus 282 ~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~----~l--- 344 (541)
. .| +++.+.+.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....... ++
T Consensus 122 ~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 199 (354)
T PRK06358 122 LTEETNFAAN-EIVLEEIKE-EIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYL 199 (354)
T ss_pred CccccCCCcc-HHHHHhhcc-CCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhc
Confidence 3 23 445555555 4899999999999999998 6688888899999999999986543211 11
Q ss_pred -ccCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHH
Q 009172 345 -SLGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALR 419 (541)
Q Consensus 345 -~~gaDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~---tl~~r~~~~~~na~~ 419 (541)
....-+++.|+||.++-+| +..||+++ ++.+++.+...... ...+....+++...++ .+....+...++++.
T Consensus 200 ~~~~~vi~~~S~SK~~gl~G-~RiG~lv~~~~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 276 (354)
T PRK06358 200 ENFKNLIIIRAFTKFFAIPG-LRLGYGLTSNKNLAEKLLQMREP--WSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDF 276 (354)
T ss_pred cCCCCEEEEEechhhccCcc-hhheeeecCCHHHHHHHHHhCCC--CcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 1134488999999998555 35788887 46777888776543 2334444444444442 234444555677788
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccc
Q 009172 420 MAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 420 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
+.+.|++++++. +..| .|++++++++.. ..|.+.|...++.+..|..+.
T Consensus 277 l~~~L~~~~~~~-~~~~-----------------~g~f~~~~~~~~----~~~~~~l~~~gI~v~~~~~f~--------- 325 (354)
T PRK06358 277 LYNGLSEFKGIK-VYKP-----------------SVNFIFFKLEKP----IDLRKELLKKGILIRSCSNYR--------- 325 (354)
T ss_pred HHHHHhcCCCcE-EcCC-----------------cceEEEEEcCch----HHHHHHHHHCCeEEEECCCCC---------
Confidence 888888765532 2222 356889998743 345555555577766654321
Q ss_pred cccCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHH
Q 009172 500 YWDLSQSERLKYGIMDNLVRFSFGV-EDFEDLKADVLQAL 538 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~~~~IRlSvG~-Ed~edli~dL~~AL 538 (541)
+..+++|||++|. ++.+.+++.|.+.+
T Consensus 326 ------------~~~~~~iRls~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 326 ------------GLDENYYRVAVKSREDNKKLLKALEVIL 353 (354)
T ss_pred ------------CCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 1235789999997 56777777776654
No 160
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=8.7e-22 Score=207.29 Aligned_cols=280 Identities=17% Similarity=0.167 Sum_probs=189.3
Q ss_pred CCCCCchhHHHHHHHHHHHh----CC---CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCc
Q 009172 204 YGRYGNPTTVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~----g~---~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
+.+|+++....|+++||+++ |. .+.|++++|+ +++.+++.+++++||.|+++.|+|..... .....|+
T Consensus 59 ~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~----~~~~~g~ 134 (368)
T PRK03317 59 LNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPI----IARGTHT 134 (368)
T ss_pred hccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH----HHHhcCC
Confidence 45667777788999999998 32 2456666665 89999999999999999999999987553 3345577
Q ss_pred EEEEeCC-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc---ccc---
Q 009172 276 TATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---KAL--- 344 (541)
Q Consensus 276 ~v~~vd~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~---~~l--- 344 (541)
++..++. .|+++++++++++++++|++++|+||||.+++.+++.++++.+++++|+||+|...... ...
T Consensus 135 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~ 214 (368)
T PRK03317 135 EWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLL 214 (368)
T ss_pred eeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHH
Confidence 6665532 37899999987546899999999999999999999999999999999999998753211 111
Q ss_pred -ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHH
Q 009172 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRM 420 (541)
Q Consensus 345 -~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~---tl~~r~~~~~~na~~l 420 (541)
.....+++.|+||.+|.+| ...|++++++++++.++.....+ ..++..+.++...++ .+..+.++..++.+.+
T Consensus 215 ~~~~~~i~~~SfSK~~g~~G-lRiG~~~~~~~~~~~l~~~~~~~--~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 291 (368)
T PRK03317 215 PEYPRLVVSRTMSKAFAFAG-GRLGYLAAAPAVVDALRLVRLPY--HLSAVTQAAARAALRHADELLASVAALRAERDRV 291 (368)
T ss_pred HhCCCEEEEEechhhhccch-hhhhhhhCCHHHHHHHHhcCCCC--CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 1123478899999998555 45789999999998887655322 344555544444443 3333445555666677
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEE-EEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccc
Q 009172 421 AEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF-EVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 421 a~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf-~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
.+.|+++ ++. +..| .|+++.+ .++ + ...+.+.+...++.+...
T Consensus 292 ~~~L~~~-g~~-~~~~-----------------~~~~~~~~~~~-~---~~~~~~~l~~~Gv~v~~~------------- 335 (368)
T PRK03317 292 VAWLREL-GLR-VAPS-----------------DANFVLFGRFA-D---RHAVWQGLLDRGVLIRDV------------- 335 (368)
T ss_pred HHHHHHC-CCE-eCCC-----------------CCcEEEEeccC-C---HHHHHHHHHHCCEEEEeC-------------
Confidence 7777765 221 2111 2444444 443 2 234555554445544321
Q ss_pred cccCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHh
Q 009172 500 YWDLSQSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALH 539 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~~~~IRlSvG~E-d~edli~dL~~AL~ 539 (541)
+ .++++||+++.. +.+.+++.|+++++
T Consensus 336 ------------~-~~~~iRi~~~~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 336 ------------G-IPGWLRVTIGTPEENDAFLAALAEVLA 363 (368)
T ss_pred ------------C-CCCeEEEecCCHHHHHHHHHHHHHHHH
Confidence 1 146899999853 45566666666654
No 161
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.90 E-value=7e-21 Score=201.17 Aligned_cols=253 Identities=16% Similarity=0.135 Sum_probs=177.8
Q ss_pred CCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA 283 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~ 283 (541)
+.+...+..++++++++++.|.+..+++++|++++..++.+++++||+|+++++.|+++...+ ...|+++..++..
T Consensus 72 ~~~g~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~----~~~g~~~~~~~~~ 147 (385)
T TIGR01825 72 TIAGTLRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGL----RLTKATKKIYKHA 147 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHH----HhcCCceEEeCCC
Confidence 333345778999999999999888899999999988899999999999999999998765332 2346777777777
Q ss_pred CHHHHHHhccCC---CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc---------cccccCCcEE
Q 009172 284 DMEGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLV 351 (541)
Q Consensus 284 dle~Le~ai~~~---~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~---------~~l~~gaDiv 351 (541)
|++++++.+++. ++++|++++++||+|.+.|+++|.++|++||+++|+|++|..+... -....+.|++
T Consensus 148 d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (385)
T TIGR01825 148 DMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQ 227 (385)
T ss_pred CHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEE
Confidence 888888876531 4899999999999999999999999999999999999998654221 0123467899
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHh
Q 009172 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAEILEA 426 (541)
Q Consensus 352 v~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~--~~g~~~s~~~a~l~l~~l~tl~---~r~~~~~~na~~la~~L~~ 426 (541)
+.|+||++++. +|++++++++++.+..... ..++..++...+.+..+++.+. ...++..++.+.+.+.|++
T Consensus 228 ~~s~sK~~~~~----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~ 303 (385)
T TIGR01825 228 VGTLSKAIGVV----GGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGK 303 (385)
T ss_pred EEeccHHhhcC----CCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999754 4889999888888865432 2233334444444444454332 2344555667777777765
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeec
Q 009172 427 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 484 (541)
Q Consensus 427 ~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS 484 (541)
. ++. +..| .++++.+.++. ......|.+.|...++.+.
T Consensus 304 ~-g~~-~~~~-----------------~~~~~~~~~~~-~~~~~~~~~~L~~~gi~v~ 341 (385)
T TIGR01825 304 L-GYD-TGGS-----------------ETPITPVVIGD-EKAAQEFSRRLFDEGIFAQ 341 (385)
T ss_pred c-CCC-CCCC-----------------CCCEEEEEECC-HHHHHHHHHHHHHCCcEEc
Confidence 3 221 1111 23466666643 2234556666644466554
No 162
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.90 E-value=8.5e-21 Score=202.27 Aligned_cols=283 Identities=16% Similarity=0.179 Sum_probs=181.1
Q ss_pred HHHHHHHHHHHhCC---CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC-----
Q 009172 212 TVVVEEKMSALEGA---ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (541)
Q Consensus 212 ~~~Le~~LA~l~g~---~~~i~~sSG-~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----- 282 (541)
++.+.+.+++..|. .+.|++++| ++|+..++.+++++||+|++++|+|..+...+ ...+..+..++.
T Consensus 76 r~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~----~~~~~~~~~v~~~~~~~ 151 (402)
T PRK06107 76 RKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMV----LANDGTPVIVACPEEQG 151 (402)
T ss_pred HHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHH----HHcCCEEEEecCCcccC
Confidence 34444445545554 234555555 59999999999999999999999888765433 222334433432
Q ss_pred --CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhC-CCEEEEEcCCCCCCcc-----cccc-----c
Q 009172 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK-GAIVCIDGTFATPLNQ-----KALS-----L 346 (541)
Q Consensus 283 --~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~-gillvvDea~a~~~~~-----~~l~-----~ 346 (541)
.|++++++++++ ++++|++++|+||||.+++ +++|+++|+++ |+++|+|++|...... .... .
T Consensus 152 ~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~ 230 (402)
T PRK06107 152 FKLTPEALEAAITP-RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELR 230 (402)
T ss_pred CCCCHHHHHhhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCcc
Confidence 357899998876 5899999999999999997 46778888998 9999999998642211 0111 1
Q ss_pred CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHH
Q 009172 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAE 422 (541)
Q Consensus 347 gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~----tl~~r~~~~~~na~~la~ 422 (541)
+..+++.|+||.++.+| ...||+++++++++.+.......+...+....+++...++ .+....+...+++..+.+
T Consensus 231 ~~vi~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 309 (402)
T PRK06107 231 DRVLVTNGVSKTYAMTG-WRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALA 309 (402)
T ss_pred CCEEEEeccchhhcCcc-cceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 24588999999997665 4579999999999998887765555556555555554442 333444455667777888
Q ss_pred HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC--------CH--HHHHHHHHH-cCCCceeecCCCcccc
Q 009172 423 ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--------DL--TATIKFIDA-LKIPYIAPSFGGCESI 491 (541)
Q Consensus 423 ~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g--------~~--~~~~~~l~~-L~~~~iavS~G~~~sl 491 (541)
.|++++++. +..| ..|.++|+.++. +. .....++.. ++..++.+..|..+
T Consensus 310 ~L~~~~g~~-~~~p----------------~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~F-- 370 (402)
T PRK06107 310 LLNAIPGLS-CLVP----------------DGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAY-- 370 (402)
T ss_pred HHhcCCCCc-ccCC----------------CcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCcccc--
Confidence 887764432 1111 134456777631 10 012334433 34456666666432
Q ss_pred eecCcccccccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHHHhh
Q 009172 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQALHA 540 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL~~AL~~ 540 (541)
|. .+++|||++.+ +.++.++.|.+.|++
T Consensus 371 --------------------g~-~~~iRis~~~~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 371 --------------------GL-SPYFRLSIATSLETLEEACARIERAVAA 400 (402)
T ss_pred --------------------CC-CCeEEEEeCCCHHHHHHHHHHHHHHHHh
Confidence 11 46899999974 233445555555543
No 163
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.90 E-value=2.6e-21 Score=202.95 Aligned_cols=268 Identities=18% Similarity=0.182 Sum_probs=173.2
Q ss_pred CCCCchh-HHHHHHHHHHHh----C---C-CcEEEeCCH-HHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009172 205 GRYGNPT-TVVVEEKMSALE----G---A-ESTVIMASG-MSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 205 ~R~~~p~-~~~Le~~LA~l~----g---~-~~~i~~sSG-~~Ai~~al~al-l~~GD~VIv~~~~y~~~~~~~~~~l~~~ 273 (541)
.+|+++. ..+|++++++++ | . .+.|++++| ++++..++..+ +++||+|++++|+|.+.... ++..
T Consensus 50 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~----~~~~ 125 (357)
T TIGR03539 50 PGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVG----ALLA 125 (357)
T ss_pred CCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHH----HHhc
Confidence 3455543 557777777765 3 2 245666666 58998888877 79999999999999875432 3456
Q ss_pred CcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc-cc---cc-
Q 009172 274 GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-KA---LS- 345 (541)
Q Consensus 274 Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~-~~---l~- 345 (541)
|.++..++ +++.++ +.++++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... .+ +.
T Consensus 126 g~~~~~v~--~~~~l~----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 199 (357)
T TIGR03539 126 GATPVAAD--DPTELD----PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDP 199 (357)
T ss_pred CCEEeccC--ChhhcC----ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceec
Confidence 88877664 444332 235899999999999999997 557888899999999999998642211 11 11
Q ss_pred ------cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHH
Q 009172 346 ------LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNST 416 (541)
Q Consensus 346 ------~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---l~~r~~~~~~n 416 (541)
....+++.|+||.++.+| ..+|+++++++++++++..+...+...+......+...++. +....+...++
T Consensus 200 ~~~~~~~~~vi~~~S~SK~~~~~G-~R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 278 (357)
T TIGR03539 200 RVCGGDHTGLLAVHSLSKRSNLAG-YRAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAAR 278 (357)
T ss_pred ccCCCccccEEEEeccccccCCCc-eeEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 123489999999997665 46899999999999888766554544555444444444422 22223334456
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCc
Q 009172 417 ALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 417 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa 496 (541)
++.+.+.|+++. +. +..| ..|-++++.++.+ ...+.+.|...++.+..|..+. +
T Consensus 279 ~~~~~~~L~~~g-~~-~~~p----------------~~~~~~~~~~~~~---~~~~~~~l~~~gV~v~pg~~f~----~- 332 (357)
T TIGR03539 279 RAQLKPALEKAG-FR-IDHS----------------EAGLYLWATRGED---AWDTVDRLAELGILVAPGDFYG----P- 332 (357)
T ss_pred HHHHHHHHHHcC-CC-CcCC----------------CccEEEEEECCCC---HHHHHHHHHhCCEEECCccccC----C-
Confidence 667777777642 21 1111 1234567776432 3345555555577776654321 0
Q ss_pred ccccccCCHHHHHhcCCCCCeEEEEecCC
Q 009172 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVE 525 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~E 525 (541)
-.+++||||++.+
T Consensus 333 ----------------~~~~~iRis~~~~ 345 (357)
T TIGR03539 333 ----------------AGSQHVRVALTAT 345 (357)
T ss_pred ----------------CCCCeEEEEecCC
Confidence 0247999999973
No 164
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.89 E-value=5.4e-21 Score=203.86 Aligned_cols=277 Identities=15% Similarity=0.120 Sum_probs=176.0
Q ss_pred hHHHHHHHHHHHh----CC---Cc-EEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 211 TTVVVEEKMSALE----GA---ES-TVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~----g~---~~-~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
....||+.+|+++ |. .+ .|++++|+ +++.+++.+++++||.|++++|+|..... .++..|+++..++
T Consensus 72 G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~ 147 (403)
T PRK08636 72 GIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQ----AFILAGGNVHKMP 147 (403)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH----HHHhcCCEEEEEe
Confidence 4557777777765 53 23 46666665 99999999999999999999999988653 3444677776653
Q ss_pred C-------CCHH----HHHHhccC--CCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEEcCCCCCCcc----
Q 009172 282 P-------ADME----GLEAALNN--NNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 282 ~-------~dle----~Le~ai~~--~~tklV~lesp~NPtG~v~di---~~Ia~la~~~gillvvDea~a~~~~~---- 341 (541)
. .|++ .++++++. .++++|++++|+||||.+++. ++|+++|++|++++|+||+|......
T Consensus 148 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~ 227 (403)
T PRK08636 148 LEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKT 227 (403)
T ss_pred ccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCC
Confidence 2 2444 45666642 258999999999999999984 58888899999999999998754321
Q ss_pred cc---ccc--CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCcc-H--HHHHHHHHhH-HHHHHHHHH
Q 009172 342 KA---LSL--GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN-P--NAAYLIIRGM-KTLHLRVQQ 412 (541)
Q Consensus 342 ~~---l~~--gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s-~--~~a~l~l~~l-~tl~~r~~~ 412 (541)
.+ +.. ...+++.|+||.++.+| ...||+++++++++.+...........+ + ..+..++.+. +.+....+.
T Consensus 228 ~~~~~~~~~~~~~i~~~S~SK~~~~~G-lRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~ 306 (403)
T PRK08636 228 PSILEVEGAKDVAVESYTLSKSYNMAG-WRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRET 306 (403)
T ss_pred CChhcCCCccccEEEEEecccccCCcc-ceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHH
Confidence 11 111 12356789999997665 4689999999999888776543222222 2 2222222221 223333344
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--HHHHHHHHH-cCCCceeecCCCcc
Q 009172 413 QNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDA-LKIPYIAPSFGGCE 489 (541)
Q Consensus 413 ~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~--~~~~~~l~~-L~~~~iavS~G~~~ 489 (541)
..++.+.+.+.|+++ .+ .+..| ..|.++|+.++... ....+|.+. ++..++.+..|..+
T Consensus 307 ~~~~~~~l~~~L~~~-~~-~~~~p----------------~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f 368 (403)
T PRK08636 307 YRKRRDVLIESFANA-GW-ELQKP----------------RASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGF 368 (403)
T ss_pred HHHHHHHHHHHHHHC-CC-cccCC----------------CcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhh
Confidence 456667777888764 22 12122 25678899987421 113445544 33456666665432
Q ss_pred cceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHH
Q 009172 490 SIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKA 532 (541)
Q Consensus 490 sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~ 532 (541)
. +..++++||+++. +.+++.+
T Consensus 369 ~---------------------~~~~~~iRi~~~~-~~~~l~~ 389 (403)
T PRK08636 369 G---------------------EYGDEYVRIALIE-NENRIRQ 389 (403)
T ss_pred C---------------------cCCCCeEEEEecC-CHHHHHH
Confidence 1 0124799999994 4444333
No 165
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.89 E-value=5e-21 Score=208.73 Aligned_cols=286 Identities=14% Similarity=0.112 Sum_probs=180.6
Q ss_pred hHHHHHHHHHHHhC----C---CcEEEeCCH-HHHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 211 TTVVVEEKMSALEG----A---ESTVIMASG-MSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g----~---~~~i~~sSG-~~Ai~~al~all-~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+||++||++++ . .+.|++++| ++++.+++++++ ++||+|+++.|+|...... ++..|.+++.++
T Consensus 116 G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~----~~~~g~~~v~v~ 191 (481)
T PTZ00377 116 GYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAA----ITLLGGKQVPYY 191 (481)
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHH----HHHcCCEEEEEE
Confidence 46788888888763 1 234555555 599999999998 7999999999999986543 344566666654
Q ss_pred C-------CCHHHHHHhccC-----CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc---c-
Q 009172 282 P-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---K- 342 (541)
Q Consensus 282 ~-------~dle~Le~ai~~-----~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~---~- 342 (541)
. .|+++|++++++ .++|+|++++|+||||.+++ +++|+++|+++|++||+||+|...... .
T Consensus 192 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~ 271 (481)
T PTZ00377 192 LDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPF 271 (481)
T ss_pred eccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCc
Confidence 2 367999998864 15899999999999999998 778899999999999999998653221 0
Q ss_pred -cc-----ccC-------CcEEEECCcccc-CCCCCceEEEEEe---ChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH-
Q 009172 343 -AL-----SLG-------ADLVLHSATKFI-GGHNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK- 404 (541)
Q Consensus 343 -~l-----~~g-------aDivv~S~sK~l-gg~g~v~gG~vv~---~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~- 404 (541)
.+ .+. .-++++|+||.+ +-.| ...||+++ ++++++++...... ....+.....++...++
T Consensus 272 ~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~G-lRiG~~~~~~~p~~li~~l~~~~~~-~~~~~~~~Q~a~~~~l~~ 349 (481)
T PTZ00377 272 ISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECG-RRGGYFELTNIPPEVREQIYKLASI-NLCSNVVGQLMTGLMCNP 349 (481)
T ss_pred ccHHHHHHhhcccccCCeEEEEEecCCcccccCCc-CceEEEEEeCCCHHHHHHHHHHhhe-ecCCChHHHHHHHHHhCC
Confidence 10 111 237889999975 4344 45788875 88899888776542 22234444333333331
Q ss_pred ---------HHHHHHH----HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHH----
Q 009172 405 ---------TLHLRVQ----QQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT---- 467 (541)
Q Consensus 405 ---------tl~~r~~----~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~---- 467 (541)
.....++ ...++++.+.+.|++++.+. +..|. .|..+|+.++....
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~-~~~p~----------------gg~fl~~~~~l~~~~~~~ 412 (481)
T PTZ00377 350 PREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS-CQPVE----------------GAMYAFPRIELPEKAIQE 412 (481)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-eecCC----------------eeEEEEeeccCchhhHHH
Confidence 1222222 23566677788888766543 22221 34556655531100
Q ss_pred -------HHHHH-HHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHHHHH
Q 009172 468 -------ATIKF-IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADVLQA 537 (541)
Q Consensus 468 -------~~~~~-l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL~~A 537 (541)
....+ ...++..++.+..|..+.. .-.++++|||++.+ +.++.++.|.+.
T Consensus 413 ~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~--------------------~~~~~~~Rls~~~~~e~l~~~l~rl~~~ 472 (481)
T PTZ00377 413 AKERGLAPDVLYCLELLESTGIVVVPGSGFGQ--------------------KPGTYHFRITILPPEEQIEEMVKKIKEF 472 (481)
T ss_pred HHhcCCCcHHHHHHHHHHHcCEEEeCCcccCC--------------------CCCCCEEEEEECCCHHHHHHHHHHHHHH
Confidence 01122 3344455777777754321 00246899999943 234455666655
Q ss_pred Hh
Q 009172 538 LH 539 (541)
Q Consensus 538 L~ 539 (541)
++
T Consensus 473 ~~ 474 (481)
T PTZ00377 473 HE 474 (481)
T ss_pred HH
Confidence 54
No 166
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.89 E-value=1.7e-21 Score=203.92 Aligned_cols=276 Identities=18% Similarity=0.229 Sum_probs=186.8
Q ss_pred CCCCCchh-HHHHHHHHHHHhC--------CCcEEEeCCHH-HHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhccc
Q 009172 204 YGRYGNPT-TVVVEEKMSALEG--------AESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 204 Y~R~~~p~-~~~Le~~LA~l~g--------~~~~i~~sSG~-~Ai~~al~al-l~~GD~VIv~~~~y~~~~~~~~~~l~~ 272 (541)
..+|+.+. ...||+++|++++ .+..+++++|+ +++..++..+ .++||.|++++|+|..+... ++.
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~----~~~ 112 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEA----ARL 112 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHH----HHH
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccccccccceecCCcccccccc----ccc
Confidence 33455554 8899999999998 23378888888 6666666666 67999999999999987644 445
Q ss_pred CCcEEEEeC-------CCCHHHHHHhccCC-----CeeEEEEeCCCCCCCcccCHHHHHHH---HHhCCCEEEEEcCCCC
Q 009172 273 MGITATVID-------PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDL---CHKKGAIVCIDGTFAT 337 (541)
Q Consensus 273 ~Gi~v~~vd-------~~dle~Le~ai~~~-----~tklV~lesp~NPtG~v~di~~Ia~l---a~~~gillvvDea~a~ 337 (541)
.|+++..++ ..|+++|++.+++. ++++|++++|+||||.+++.+++.++ |+++|+++|+|++|..
T Consensus 113 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~ 192 (363)
T PF00155_consen 113 LGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSD 192 (363)
T ss_dssp TTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTT
T ss_pred cCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceec
Confidence 577777776 34899999988762 37899999999999999986655555 9999999999999887
Q ss_pred CCcccc--------cccCC-cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH----
Q 009172 338 PLNQKA--------LSLGA-DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---- 404 (541)
Q Consensus 338 ~~~~~~--------l~~ga-Divv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~---- 404 (541)
...... ...+. .+++.|+||.+|.+|. ..|++++++++++.++.....+.. +.....++...+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RvG~i~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~ 269 (363)
T PF00155_consen 193 LIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGL-RVGYIVAPPELIERLRRFQRSGLS--SSPMQAAAAAALSDPEL 269 (363)
T ss_dssp GBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGG-TEEEEEEEHHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHH
T ss_pred cccCCCccCcccccccccccceeeeecccccccccc-ccccccchhhhhhhhhhccccccc--cchhhHHHHHhhhcccc
Confidence 544321 12233 4899999999987663 468888898999998887665444 3333322222222
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC-c
Q 009172 405 ---TLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP-Y 480 (541)
Q Consensus 405 ---tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~-~ 480 (541)
.+..+.++..++.+.+.+.|++. .+. +..+ ..|.++++.++. .+...|.+.|... +
T Consensus 270 ~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~-~~~~----------------~~~~~~~~~~~~--~~~~~l~~~L~~~~g 329 (363)
T PF00155_consen 270 VEKWLEELRERLRENRDLLREALEEI-GIT-VLPP----------------EAGFFLWVRLDP--NDAEELAQELLEEYG 329 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT-TSE-EEHH----------------SBSSEEEEEESH--HHHHHHHHHHHHHHT
T ss_pred cccccccchhhHHHHHHHHHHHHHHh-hhh-eeec----------------cCccEEEEEccc--chHHHHHHHHHHhCC
Confidence 44555666778888888888876 332 2111 134566777753 2445555555443 6
Q ss_pred eeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 009172 481 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED 529 (541)
Q Consensus 481 iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~ed 529 (541)
+.+..|..+ +. +++||++++.-+.++
T Consensus 330 i~v~pg~~~----------------------~~-~~~iRi~~a~~~~e~ 355 (363)
T PF00155_consen 330 ILVRPGSYF----------------------GV-PGYIRISLASHSEED 355 (363)
T ss_dssp EEEEEGGGG----------------------TS-TTEEEEEGGCSCHHH
T ss_pred EEEEecCCC----------------------CC-CCEEEEEeccCCHHH
Confidence 655554331 22 679999994434443
No 167
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.89 E-value=6.3e-21 Score=199.25 Aligned_cols=272 Identities=21% Similarity=0.259 Sum_probs=184.6
Q ss_pred CchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhccCCCEEEEc---CCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVPAGGHIVTT---TDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all~~GD~VIv~---~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
..+..++||+++|+++|. ++++++++|.+|+..++.+++++||+|+++ .+.|.... ...+..|.++. ..
T Consensus 52 ~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~----~~~~l~ga~~~--~~ 125 (346)
T TIGR03576 52 PAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIP----RSCKLAGAEYF--ES 125 (346)
T ss_pred CHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHH----HHHHHcCCEEe--cc
Confidence 347899999999999998 788999999999999999999999999975 35665543 33444566653 33
Q ss_pred CCHHHHHHhccCCCeeEEEEeCCCCCCCcc---cCHHHHHHHHHhCCCEEEEEcCCCCCCc----c-cccccCCcEEEEC
Q 009172 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRC---VDVKLVSDLCHKKGAIVCIDGTFATPLN----Q-KALSLGADLVLHS 354 (541)
Q Consensus 283 ~dle~Le~ai~~~~tklV~lesp~NPtG~v---~di~~Ia~la~~~gillvvDea~a~~~~----~-~~l~~gaDivv~S 354 (541)
.++++++. . + ++++|++ +++|++|.+ .|+++|+++|+++|++|++||+|+.++. . .....++|+++.|
T Consensus 126 ~~l~~l~~-~-~-~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s 201 (346)
T TIGR03576 126 DELSELKK-I-D-GTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTS 201 (346)
T ss_pred CCHHHHhh-C-c-CceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEec
Confidence 46666543 2 3 4788888 457899998 5788999999999999999999887532 1 1234568999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHhCCCceE
Q 009172 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAEILEAHPKVKR 432 (541)
Q Consensus 355 ~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~--~r~~~~~~na~~la~~L~~~p~v~~ 432 (541)
+||.++|. .+|++++++++++.++.....++.+.++..++.+..+|+.+. .+.+...++...+.+.+.. + .
T Consensus 202 ~SKalaG~---r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~---~-~ 274 (346)
T TIGR03576 202 TDKLMDGP---RGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK---L-N 274 (346)
T ss_pred cchhcccc---ceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh---C-C
Confidence 99988654 489999999999999887766665556666666677776532 1222233333333444442 1 1
Q ss_pred EeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC--HHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHh
Q 009172 433 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD--LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 510 (541)
Q Consensus 433 V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~--~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~ 510 (541)
+ +| + .+|++++.+++. .+.+..+ |+..++.+..|..+ +
T Consensus 275 ~-~~---~-------------~~~f~~~~~~~~~~~~~~~~l---l~~~gV~v~~~~~f-----~--------------- 314 (346)
T TIGR03576 275 V-ER---T-------------PTGFVIKGVEEEKLIEIGLDL---LRNYGIITITAVGM-----P--------------- 314 (346)
T ss_pred C-Cc---C-------------CCeEEEEeCCCCCHHHHHHHH---HHhCCEEEeCCccc-----C---------------
Confidence 1 12 1 245788888642 2333333 34445655544221 0
Q ss_pred cCCCCCeEEEEecCCC-----HHHHHHHHHHHH
Q 009172 511 YGIMDNLVRFSFGVED-----FEDLKADVLQAL 538 (541)
Q Consensus 511 ~gi~~~~IRlSvG~Ed-----~edli~dL~~AL 538 (541)
+ .+++||||++.++ .+.+++.|++.|
T Consensus 315 -~-~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 315 -G-ASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred -C-CCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 1 2579999999866 666777666554
No 168
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=6.3e-21 Score=199.47 Aligned_cols=286 Identities=20% Similarity=0.224 Sum_probs=216.6
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHH
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~ 287 (541)
..+.+.+||++||+++|.+.+++|+||..|+..++.+++++||.|+.....|.+.... .+..+.++..+...|+++
T Consensus 82 ~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG----~rls~a~~~~f~HnD~~~ 157 (388)
T COG0156 82 TSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDG----IRLSRAEVRRFKHNDLDH 157 (388)
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHH----HHhCCCcEEEecCCCHHH
Confidence 4578999999999999999999999999999999999999999999999999885533 344567888888999999
Q ss_pred HHHhccCC-----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccc-------c---ccCCcEEE
Q 009172 288 LEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA-------L---SLGADLVL 352 (541)
Q Consensus 288 Le~ai~~~-----~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~-------l---~~gaDivv 352 (541)
||+.+++. +.++|++|...+..|.+.|+++|.+++++||++++|||+++.++...- . ...+||++
T Consensus 158 Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~ 237 (388)
T COG0156 158 LEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIV 237 (388)
T ss_pred HHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEE
Confidence 99999652 258999999999999999999999999999999999999887654311 1 12248999
Q ss_pred ECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCCccHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHhC
Q 009172 353 HSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 353 ~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~--~~~g~~~s~~~a~l~l~~l~tl~---~r~~~~~~na~~la~~L~~~ 427 (541)
.|++|.+|.. ||++.++..+++.++... ..+.+.++|..+..+...++.+. .+.+++.++...+...+...
T Consensus 238 gTlsKAlGs~----Gg~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~ 313 (388)
T COG0156 238 GTLGKALGSS----GGYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL 313 (388)
T ss_pred EEchhhhccc----CceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999954 699999999999887643 34667788887766666666544 55566666666666444432
Q ss_pred CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHH
Q 009172 428 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSE 507 (541)
Q Consensus 428 p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~ 507 (541)
. ++..+ ....++.+.+. +...+.++.+.|...|+.++. +..|.. |
T Consensus 314 ~------~~~~~-------------s~s~I~pv~~g-d~~~a~~~s~~l~~~Gi~v~~------i~~PTV------p--- 358 (388)
T COG0156 314 G------LVLLP-------------SESPIIPVILG-DEERALEASRALLEEGIYVSA------IRPPTV------P--- 358 (388)
T ss_pred C------CccCC-------------CCCCeeeeEeC-CHHHHHHHHHHHHHCCeeEee------ecCCCC------C---
Confidence 1 11111 13458888884 556667777766554655443 233321 1
Q ss_pred HHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 508 RLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 508 ~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
.....||+++...++++.|+.+.++|.++
T Consensus 359 -----~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 359 -----KGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred -----CCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 12468999999999999999999998753
No 169
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.89 E-value=3.1e-21 Score=202.82 Aligned_cols=266 Identities=18% Similarity=0.181 Sum_probs=173.8
Q ss_pred CCCch-hHHHHHHHHHHHh----C---C-CcEEEeCCHH-HHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009172 206 RYGNP-TTVVVEEKMSALE----G---A-ESTVIMASGM-SASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 206 R~~~p-~~~~Le~~LA~l~----g---~-~~~i~~sSG~-~Ai~~al~al-l~~GD~VIv~~~~y~~~~~~~~~~l~~~G 274 (541)
+|+.+ ...+|++++|+++ | . .+.|++++|+ +++..++..+ +++||+|++++|+|..... .....|
T Consensus 57 ~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~----~~~~~g 132 (364)
T PRK07865 57 GYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV----GARLAG 132 (364)
T ss_pred CCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH----HHHhcC
Confidence 34433 3457777777766 3 2 3456666665 8888877777 7999999999999987653 334568
Q ss_pred cEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc-c---c---
Q 009172 275 ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-A---L--- 344 (541)
Q Consensus 275 i~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~-~---l--- 344 (541)
+++..++ ++++++. + ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|....... + +
T Consensus 133 ~~~~~~~--~~~~l~~---~-~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 206 (364)
T PRK07865 133 ATVVRAD--SLTELGP---Q-RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPR 206 (364)
T ss_pred CEEEecC--ChhhCCc---c-cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCcccccc
Confidence 8887764 3444332 3 5899999999999999988 4578888999999999999987532211 0 1
Q ss_pred ----ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHH
Q 009172 345 ----SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTA 417 (541)
Q Consensus 345 ----~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~---tl~~r~~~~~~na 417 (541)
.....+++.|+||.++.+| ..+||+++++++++.++......+...+.....++...++ .+....+...++.
T Consensus 207 ~~~~~~~~~i~~~S~SK~~~~~G-lRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 285 (364)
T PRK07865 207 VCGGDHTGLLAVHSLSKQSNLAG-YRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRR 285 (364)
T ss_pred ccCCccceEEEEeechhccCCCc-eeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 1123589999999997655 4688999999999988876655555555555444444443 2333334445666
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcc
Q 009172 418 LRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 418 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~ 497 (541)
..+.+.|+++ ++. +..| ..|.++|+.++.+ ...+.+.+...++.+..|..+. +
T Consensus 286 ~~l~~~L~~~-g~~-~~~~----------------~~~~~~~~~~~~~---~~~~~~~l~~~gv~v~pg~~f~----~-- 338 (364)
T PRK07865 286 AVLRPALEAA-GFR-VDHS----------------EAGLYLWATRGED---CWDTVAWLAERGILVAPGDFYG----P-- 338 (364)
T ss_pred HHHHHHHHHc-CCc-ccCC----------------CccEEEEEeCCCC---HHHHHHHHHHCCEEEeCccccC----c--
Confidence 7777777764 221 1111 1234577776432 2344455555577666654321 0
Q ss_pred cccccCCHHHHHhcCCCCCeEEEEecC
Q 009172 498 MSYWDLSQSERLKYGIMDNLVRFSFGV 524 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~ 524 (541)
-.+++|||+++.
T Consensus 339 ---------------~~~~~iRi~~~~ 350 (364)
T PRK07865 339 ---------------AGAQHVRVALTA 350 (364)
T ss_pred ---------------CCCCEEEEEecC
Confidence 024789999986
No 170
>PRK10534 L-threonine aldolase; Provisional
Probab=99.89 E-value=6e-21 Score=197.95 Aligned_cols=253 Identities=15% Similarity=0.181 Sum_probs=172.6
Q ss_pred CCC-CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccC-CcEEEEeCC
Q 009172 205 GRY-GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM-GITATVIDP 282 (541)
Q Consensus 205 ~R~-~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~-Gi~v~~vd~ 282 (541)
.+| ++|...+||++||+++|.+..+++++|++++..++.+++.+||+|+++.+.|...+... ..... ++++..++.
T Consensus 28 ~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 105 (333)
T PRK10534 28 DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYEAG--GAAVLGSIQPQPIDA 105 (333)
T ss_pred cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhcCC--chHHhcCceEEeecC
Confidence 456 79999999999999999988899999999998888888999999999887775322110 01112 245555532
Q ss_pred -----CCHHHHHHhccCC-----CeeEEEEeCCCCCCCcccCHHH---HHHHHHhCCCEEEEEcCCCCCC------cccc
Q 009172 283 -----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKL---VSDLCHKKGAIVCIDGTFATPL------NQKA 343 (541)
Q Consensus 283 -----~dle~Le~ai~~~-----~tklV~lesp~NPtG~v~di~~---Ia~la~~~gillvvDea~a~~~------~~~~ 343 (541)
.|+++|+++++++ ++++|++++|+ +|.+.|.++ |.++|+++|++|++||+|.... ....
T Consensus 106 ~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~ 183 (333)
T PRK10534 106 AADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKE 183 (333)
T ss_pred CCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHH
Confidence 2799999998652 48999999766 599998664 5677889999999999854210 0011
Q ss_pred cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCcc--HHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 009172 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN--PNAAYLIIRGMKTLHLRVQQQNSTALRMA 421 (541)
Q Consensus 344 l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s--~~~a~l~l~~l~tl~~r~~~~~~na~~la 421 (541)
.....|.++.|+||.++.. +||++++++++++.++.....++...+ ...+.++...++....++++..++++++.
T Consensus 184 ~~~~~~~~~~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~ 260 (333)
T PRK10534 184 ITQYCDSFTICLSKGLGTP---VGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLA 260 (333)
T ss_pred HHhcCCEEEEEeEcCCCCc---ccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 1123466677999988753 456888999999999887765554332 23344444455544456666667788899
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC
Q 009172 422 EILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 485 (541)
Q Consensus 422 ~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~ 485 (541)
+.|+++ ++. + +|. .++++++.+++ .....+.+.|+..|+.+..
T Consensus 261 ~~L~~~-g~~-~-~~~----------------~~nfv~~~~~~--~~~~~~~~~l~~~gi~v~~ 303 (333)
T PRK10534 261 EQLREA-GAD-V-MRQ----------------DTNMLFVRVGE--EQAAALGEYMRERNVLINA 303 (333)
T ss_pred HHHHhC-CCc-c-CCC----------------CceEEEEECCc--hhHHHHHHHHHHcCeeecC
Confidence 999875 331 2 221 36788888863 2344555666655665543
No 171
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.89 E-value=4e-21 Score=201.73 Aligned_cols=282 Identities=15% Similarity=0.117 Sum_probs=188.1
Q ss_pred CCCCchhHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 205 GRYGNPTTVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.+|+.+...+|+++||++++.+ +.|++++|+ +++.+++.++. +||.|++++|+|..... .++..|+++..++.
T Consensus 52 ~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~----~~~~~g~~~~~v~~ 126 (360)
T PRK07392 52 RHYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRR----ALRAFGATVKELPL 126 (360)
T ss_pred hcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHH----HHHHcCCeEEEEec
Confidence 4456666779999999999763 445556655 89998888764 68999999999988653 44456777776643
Q ss_pred C----------CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCccc---c----c-
Q 009172 283 A----------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---A----L- 344 (541)
Q Consensus 283 ~----------dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~---~----l- 344 (541)
+ +++++++.. + +++++++++||||||.+++.++|.++++++++ +|+||+|....... + .
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~ 203 (360)
T PRK07392 127 PLDQPSPGLTLRLQTLPPQL-T-PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLA 203 (360)
T ss_pred ccccCCcccccCHHHHHHhc-c-CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhh
Confidence 2 345555443 2 47999999999999999999999999999985 66799987543211 1 1
Q ss_pred ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---HHHHHHHHHHHHHHHH
Q 009172 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---LHLRVQQQNSTALRMA 421 (541)
Q Consensus 345 ~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---l~~r~~~~~~na~~la 421 (541)
....-+++.|+||.++-+| +..|++++++++++.+..... ....+....+++...++. .....+...++++.+.
T Consensus 204 ~~~~vi~i~S~SK~~~l~G-lRiG~~v~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 280 (360)
T PRK07392 204 EYPNLIILRSLTKFYSLPG-LRLGYAIAHPDRLQRWQQWRD--PWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALF 280 (360)
T ss_pred cCCCEEEEEechhhhcCCc-hheeeeeCCHHHHHHHHhhCC--CCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 1123588999999998555 357999999988888776543 233455555554444432 1222234456677788
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHH-cCCCceeecCCCcccceecCccccc
Q 009172 422 EILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA-LKIPYIAPSFGGCESIVDQPAIMSY 500 (541)
Q Consensus 422 ~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~-L~~~~iavS~G~~~sl~~~pa~~~~ 500 (541)
+.|+.++++. + +| +.|++++++++.+ ..++.+. ++..++.+..|..+.
T Consensus 281 ~~L~~~~~~~-~-~~----------------~~~~fl~~~~~~~---~~~l~~~ll~~~gv~v~pg~~f~---------- 329 (360)
T PRK07392 281 QGLASLPGLT-P-LP----------------SAANFLLVQSQGS---ALQLQEKLLQQHRILIRDCLSFP---------- 329 (360)
T ss_pred HHHHhCCCcE-E-CC----------------CCCCEEEEEcCCC---HHHHHHHHHhhCCEEEEeCCCCC----------
Confidence 8887665542 1 22 1467888887632 3445444 344567766664321
Q ss_pred ccCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHHh
Q 009172 501 WDLSQSERLKYGIMDNLVRFSFGVED-FEDLKADVLQALH 539 (541)
Q Consensus 501 ~~~~~~~~~~~gi~~~~IRlSvG~Ed-~edli~dL~~AL~ 539 (541)
+..+++|||+++..+ .+++.+.|++.+.
T Consensus 330 -----------~~~~~~iRi~~~~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 330 -----------ELGDRYFRVAVRTEAENQRLLEALAAILA 358 (360)
T ss_pred -----------CCCCCEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 113579999999854 5677777766543
No 172
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.89 E-value=6.8e-22 Score=204.54 Aligned_cols=175 Identities=19% Similarity=0.241 Sum_probs=148.0
Q ss_pred HHhcccCCCCCCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh-ccCCC----EEEEcCCCCcchHHHH
Q 009172 194 FKEKRRASFEYGRYGNPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAGG----HIVTTTDCYRKTRIFI 266 (541)
Q Consensus 194 ~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~al-l~~GD----~VIv~~~~y~~~~~~~ 266 (541)
++.+++.. .|++...+..++.|+.+|++.|++ +.+|+.++|++++++++.+ ...+| +||+...+|......+
T Consensus 70 ~~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~ 148 (428)
T KOG1549|consen 70 YLGNPHSR-SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSC 148 (428)
T ss_pred hhcCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHH
Confidence 34455444 688888888999999999999984 5455555569999999987 34567 9999999999987666
Q ss_pred HhhcccCCcEEEEeCCC-----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-Cc
Q 009172 267 ETVLPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LN 340 (541)
Q Consensus 267 ~~~l~~~Gi~v~~vd~~-----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~-~~ 340 (541)
. .++..|+++++++.. |++.++++|++ +|++|.+.+.+|..|.++|+++|.++|++.|+.+++|.+++.+ ..
T Consensus 149 ~-~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~-~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~ 226 (428)
T KOG1549|consen 149 R-ALQEEGLEVTYLPVEDSGLVDISKLREAIRS-KTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIP 226 (428)
T ss_pred H-HHHhcCeEEEEeccCccccccHHHHHHhcCC-CceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCcc
Confidence 4 466678999998753 78999999998 5999999999999999999999999999999999999999876 45
Q ss_pred ccccccCCcEEEECCccccCCCCCceEEEEEeCh
Q 009172 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG 374 (541)
Q Consensus 341 ~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~ 374 (541)
.+..++++|++..|+||++|+++ .|+++.++
T Consensus 227 vDV~eln~D~~s~s~HK~ygp~~---iGaLYvr~ 257 (428)
T KOG1549|consen 227 VDVQELNADFLSISAHKIYGPPG---IGALYVRR 257 (428)
T ss_pred ccHHHcCchheeeecccccCCCc---ceEEEEcc
Confidence 78889999999999999999998 57888765
No 173
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.89 E-value=1.1e-20 Score=195.31 Aligned_cols=289 Identities=17% Similarity=0.177 Sum_probs=196.3
Q ss_pred CCCCCchhHHHHHHHHHHHhCC--------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCc
Q 009172 204 YGRYGNPTTVVVEEKMSALEGA--------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI 275 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~--------~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi 275 (541)
+.+...+...++++.++++++. ++.+++++|++++..++.++.++||+|+++.+.|.+.... ++..|.
T Consensus 30 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~----~~~~~~ 105 (350)
T cd00609 30 LGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAA----ARLAGA 105 (350)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH----HHHCCC
Confidence 3444556677788888877753 3567777778999999999999999999999999986643 445577
Q ss_pred EEEEeCCC-----CH--HHHHHhccCCCeeEEEEeCCCCCCCcccCHHHH---HHHHHhCCCEEEEEcCCCCCCc-----
Q 009172 276 TATVIDPA-----DM--EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV---SDLCHKKGAIVCIDGTFATPLN----- 340 (541)
Q Consensus 276 ~v~~vd~~-----dl--e~Le~ai~~~~tklV~lesp~NPtG~v~di~~I---a~la~~~gillvvDea~a~~~~----- 340 (541)
++..++.. +. +.++..+++ ++++|++++|+||+|.+.|++++ .++|+++|+++|+|++++.+..
T Consensus 106 ~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~ 184 (350)
T cd00609 106 EVVPVPLDEEGGFLLDLELLEAAKTP-KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPP 184 (350)
T ss_pred EEEEEecccccCCccCHHHHHhhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccc
Confidence 77777543 12 556666665 59999999999999999986655 4899999999999999765321
Q ss_pred ---ccccccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----HHHHHHH
Q 009172 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKT----LHLRVQQ 412 (541)
Q Consensus 341 ---~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~-~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t----l~~r~~~ 412 (541)
......+.|+++.|++|+++..+ ...|++++++ ++.+.++..........+......+...++. +....++
T Consensus 185 ~~~~~~~~~~~~~~~~s~~K~~~~~g-~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 263 (350)
T cd00609 185 PALALLDAYERVIVLRSFSKTFGLPG-LRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRER 263 (350)
T ss_pred ccccCcCccCcEEEEeecccccCCcc-cceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHH
Confidence 12334568999999999997333 3478888888 7888888766554444444444444434433 3334455
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccce
Q 009172 413 QNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 492 (541)
Q Consensus 413 ~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~ 492 (541)
..++++++.+.|++++.... .. ...|.++++.+++. .....+.+.++..++.+..++.+..
T Consensus 264 ~~~~~~~l~~~L~~~~~~~~-~~----------------~~~g~~~~~~~~~~-~~~~~~~~~l~~~gi~i~~~~~~~~- 324 (350)
T cd00609 264 YRRRRDALLEALKELGPLVV-VK----------------PSGGFFLWLDLPEG-DDEEFLERLLLEAGVVVRPGSAFGE- 324 (350)
T ss_pred HHHHHHHHHHHHHhcCCccc-cC----------------CCccEEEEEecCCC-ChHHHHHHHHHhCCEEEeccccccc-
Confidence 66778888888887654321 11 12567888888653 2233445555555666665433210
Q ss_pred ecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
.....||++++.. ++.++.+.++|+
T Consensus 325 --------------------~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 325 --------------------GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred --------------------CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 1357999999987 555566666554
No 174
>PLN02822 serine palmitoyltransferase
Probab=99.89 E-value=1.1e-20 Score=205.69 Aligned_cols=289 Identities=14% Similarity=0.116 Sum_probs=198.8
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHH
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~ 287 (541)
+.+...+||++||++++.++.+++++|..++..++.+++++||.|++....|..+... +...+.++.+++.+|.++
T Consensus 152 ~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~----~~ls~~~~~~~~~nd~~~ 227 (481)
T PLN02822 152 TIDVHLDCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQNG----LYLSRSTIVYFKHNDMES 227 (481)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHHH----HHHcCCeEEEECCCCHHH
Confidence 4567899999999999998999999998888999999999999999887777654332 233466888888888777
Q ss_pred HHHhccC--------CCe-eEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc-------cccc---cCC
Q 009172 288 LEAALNN--------NNV-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-------KALS---LGA 348 (541)
Q Consensus 288 Le~ai~~--------~~t-klV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~-------~~l~---~ga 348 (541)
++..+++ .++ ++|++|+++|++|.+.|+++|.++|++||+++|+||++..+... .... ...
T Consensus 228 l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~ 307 (481)
T PLN02822 228 LRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKI 307 (481)
T ss_pred HHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCC
Confidence 7665531 124 79999999999999999999999999999999999998744321 1111 246
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHH
Q 009172 349 DLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEI 423 (541)
Q Consensus 349 Divv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~--~~g~~~s~~~a~l~l~~l~tl---~~r~~~~~~na~~la~~ 423 (541)
|+++.|++|.++.. ||++++++++++.++.... .+++.+++..+..++..++.+ ....++..++.+.+.+.
T Consensus 308 dii~~s~sKalg~~----GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~ 383 (481)
T PLN02822 308 DIITAAMGHALATE----GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKG 383 (481)
T ss_pred eEEEecchhhhhhC----CeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 89999999999854 4899999999888764332 334445566555555555543 34556677888888888
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------HHHHHHHHHHcC-CCceeecCCCcccceecC
Q 009172 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALK-IPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 424 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-------~~~~~~~l~~L~-~~~iavS~G~~~sl~~~p 495 (541)
|++.+++. +..| +.+.++.+.+++. .....+|.+.|- ..|+.++.+.. |
T Consensus 384 L~~~~g~~-~~~~----------------~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~------~ 440 (481)
T PLN02822 384 LSDIPGLS-IGSN----------------TLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKR------S 440 (481)
T ss_pred HHhcCCcc-cCCC----------------CCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCC------C
Confidence 87654332 1111 2456888888531 123456777764 55766664422 1
Q ss_pred cccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
. +. .+-.+..+|+++....+++.|+.+.++|+
T Consensus 441 ~---~~---------~~~~~~~lRi~is~~~t~edI~~~~~~l~ 472 (481)
T PLN02822 441 T---LD---------KCRLPVGIRLFVSAGHTESDILKASESLK 472 (481)
T ss_pred C---cC---------CCCCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 0 00 01113479999876555444444444443
No 175
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.89 E-value=1.3e-20 Score=199.34 Aligned_cols=304 Identities=20% Similarity=0.182 Sum_probs=207.2
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC-----
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al-l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----- 282 (541)
.+...+||+++++++|.+++++++||++|+.+++.++ +++||+|+++.++|.++.. .....|+++++++.
T Consensus 28 g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~----~~~~~G~~~~~~~~~~~~~ 103 (380)
T TIGR03588 28 GPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATAN----CALYCGAKVDFVDIDPDTG 103 (380)
T ss_pred ChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH----HHHHcCCEEEEEecCCCcC
Confidence 5788999999999999999999999999999999998 8999999999999988653 34456888888865
Q ss_pred -CCHHHHHHhcc----CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCC----cEEEE
Q 009172 283 -ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGA----DLVLH 353 (541)
Q Consensus 283 -~dle~Le~ai~----~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~ga----Divv~ 353 (541)
.|+++++++++ + +|++|++ +|++|...|+++|.++|+++|++||+|++++.+...+....|. |++++
T Consensus 104 ~~d~~~l~~~i~~~~~~-~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~ 179 (380)
T TIGR03588 104 NIDEDALEKKLAAAKGK-LPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVF 179 (380)
T ss_pred CcCHHHHHHHhhcccCC-CceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEE
Confidence 27899999998 5 5899886 5678999999999999999999999999987654333334455 99999
Q ss_pred CCc--cccCCCCCceEEEEEe-ChHHHHHHHHHhhh-------------------------cCCCccHHHHHHHHHhHHH
Q 009172 354 SAT--KFIGGHNDVLAGSISG-SGKLVTQIRNLHHV-------------------------LGGALNPNAAYLIIRGMKT 405 (541)
Q Consensus 354 S~s--K~lgg~g~v~gG~vv~-~~~li~~l~~~~~~-------------------------~g~~~s~~~a~l~l~~l~t 405 (541)
|++ |+++.+ .||+++. ++++.++++..+.. ++..++...+.+.+..|+.
T Consensus 180 S~~~~K~~~~~---~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~ 256 (380)
T TIGR03588 180 SFHPVKIITTA---EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKK 256 (380)
T ss_pred ecCCCCccccc---CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHH
Confidence 987 888754 3676665 46677766643210 0123456667777778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-CHHHHHHHHHHcCCCceeec
Q 009172 406 LHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDALKIPYIAPS 484 (541)
Q Consensus 406 l~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g-~~~~~~~~l~~L~~~~iavS 484 (541)
++.+.++..++++++.+.|...+.+. +..+...... ...++.+.++. .......+.+.|+..+|.+.
T Consensus 257 l~~~~~~r~~~~~~~~~~L~~~~~~~-~~~~~~~~~~-----------~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~ 324 (380)
T TIGR03588 257 LDRFVAKRREIAARYDRLLKDLPYFT-PLTIPLGSKS-----------AWHLYPILLDQEFGCTRKEVFEALRAAGIGVQ 324 (380)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc-CCCCCCCCEe-----------EEEEEEEEECCcCCCCHHHHHHHHHHCCCCcc
Confidence 98899999999999999998877543 1111100000 01123333431 00123455666655566655
Q ss_pred CCCcccceecCcccc---cccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 485 FGGCESIVDQPAIMS---YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 485 ~G~~~sl~~~pa~~~---~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
..- ..+..+|.... ...++..+ .+....|+|.++..-+++.++.+.++|.+
T Consensus 325 ~~~-~~~~~~~~~~~~~~~~~~p~a~----~~~~~~l~lP~~~~l~~~dv~~i~~~l~~ 378 (380)
T TIGR03588 325 VHY-IPVHLQPYYRQGFGDGDLPSAE----NFYLAEISLPLHPALTLEQQQRVVETLRK 378 (380)
T ss_pred cCC-cccccChhhhccCCcCCCcHHH----HHHhceEEcCCCCCCCHHHHHHHHHHHHH
Confidence 332 11112222111 11122111 12357899999876666667777777664
No 176
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.89 E-value=8.1e-21 Score=200.96 Aligned_cols=210 Identities=20% Similarity=0.256 Sum_probs=167.2
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC----
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al-l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
..|...+||+++|+++|.+.+++++||++|+.+++.++ +++||+||++.++|.++...+ ...|++++++|.
T Consensus 31 ~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~----~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 31 TGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMI----VLLGATPVMVDVDRDT 106 (379)
T ss_pred CCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHH----HHcCCEEEEEecCCCc
Confidence 46889999999999999999999999999999999998 899999999999999876433 446888888864
Q ss_pred --CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCccc---ccccCCcEEEECCcc
Q 009172 283 --ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---ALSLGADLVLHSATK 357 (541)
Q Consensus 283 --~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~---~l~~gaDivv~S~sK 357 (541)
.|++++++++++ +||+|+ |+|++|.+.|+++|.++|+++|+++|+|++++.+.... ....|.+++.++.+|
T Consensus 107 ~~~d~~~l~~~i~~-~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K 182 (379)
T PRK11658 107 LMVTPEAIEAAITP-RTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIK 182 (379)
T ss_pred CCcCHHHHHHhccc-CCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCC
Confidence 278999999987 599987 57789999999999999999999999999987654332 234566666666678
Q ss_pred ccCCCCCceEEEEEeC-hHHHHHHHHHhhh----------------------cC--CCccHHHHHHHHHhHHHHHHHHHH
Q 009172 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV----------------------LG--GALNPNAAYLIIRGMKTLHLRVQQ 412 (541)
Q Consensus 358 ~lgg~g~v~gG~vv~~-~~li~~l~~~~~~----------------------~g--~~~s~~~a~l~l~~l~tl~~r~~~ 412 (541)
.+.++ .||+++.+ +++.++++..+.. .| ..++.+.+.+.+..++.++...++
T Consensus 183 ~l~~g---~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~ 259 (379)
T PRK11658 183 NITCA---EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNAR 259 (379)
T ss_pred cCccc---CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 88654 37888874 6777777654310 01 124556777777888888888888
Q ss_pred HHHHHHHHHHHHHhCC
Q 009172 413 QNSTALRMAEILEAHP 428 (541)
Q Consensus 413 ~~~na~~la~~L~~~p 428 (541)
+.++++.+.+.|++.+
T Consensus 260 r~~~a~~~~~~L~~~~ 275 (379)
T PRK11658 260 RREIAARYLQALADLP 275 (379)
T ss_pred HHHHHHHHHHHhcCCC
Confidence 8899999999998765
No 177
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.5e-20 Score=199.79 Aligned_cols=280 Identities=15% Similarity=0.152 Sum_probs=182.7
Q ss_pred chhHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 209 NPTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g--------~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
......+++.++++++ .++.++++++++++..++.+++++||.|++++|+|..... .++..|++++++
T Consensus 72 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~----~~~~~g~~v~~v 147 (394)
T PRK06836 72 NAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRF----YVDNHGGKLVVV 147 (394)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHH----HHHHcCCEEEEE
Confidence 3556778888888764 2345556666699999999999999999999999988553 345568888887
Q ss_pred CC------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHh------CCCEEEEEcCCCCCCcc--c-
Q 009172 281 DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK------KGAIVCIDGTFATPLNQ--K- 342 (541)
Q Consensus 281 d~------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~------~gillvvDea~a~~~~~--~- 342 (541)
+. .|++++++++++ ++++|++++|+||||.++| +++|+++|++ ||+++|+|++|...... .
T Consensus 148 ~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~ 226 (394)
T PRK06836 148 PTDTDTFQPDLDALEAAITP-KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEV 226 (394)
T ss_pred ecCCccCcCCHHHHHhhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCC
Confidence 53 268999999977 5999999999999999998 5577777888 89999999998753221 0
Q ss_pred c--c-ccCCcEEEECCccccCCCCCceEEEEEeChHHHHH------HHHHhhhcC-CCccHHHHHHHHHhHHHHHHHHHH
Q 009172 343 A--L-SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ------IRNLHHVLG-GALNPNAAYLIIRGMKTLHLRVQQ 412 (541)
Q Consensus 343 ~--l-~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~------l~~~~~~~g-~~~s~~~a~l~l~~l~tl~~r~~~ 412 (541)
+ . ..+..+++.|+||.++.+| ...|++++++++.+. +.......+ ...+......+.+.++.. .+.+.
T Consensus 227 ~~~~~~~~~~i~~~S~SK~~~~pG-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~ 304 (394)
T PRK06836 227 PYIFKYYDNSIVVYSFSKSLSLPG-ERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-VDVSI 304 (394)
T ss_pred CChHHccCcEEEEecchhhccCcc-eeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-HHHHH
Confidence 0 1 1234689999999998665 357888888765432 111112122 133444444434444331 22344
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccce
Q 009172 413 QNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 492 (541)
Q Consensus 413 ~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~ 492 (541)
..++...+.+.|+++ ++ .+..| ..|..+|+.++.. ...++.+.+...++.+..|..+.
T Consensus 305 ~~~~r~~l~~~L~~~-g~-~~~~~----------------~gg~~~~~~~~~~--~~~~~~~~l~~~gv~v~~g~~f~-- 362 (394)
T PRK06836 305 YKRNRDLLYDGLTEL-GF-ECVKP----------------QGAFYLFPKSPEE--DDVAFCEKAKKHNLLLVPGSGFG-- 362 (394)
T ss_pred HHHHHHHHHHHHHhC-CC-EeecC----------------CceEEEEEeCCCC--CHHHHHHHHHhCCEEEECchhcC--
Confidence 556677777888775 22 12222 1355677777642 23455566665676666553321
Q ss_pred ecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHH---HHHHHHHHHHh
Q 009172 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFE---DLKADVLQALH 539 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~e---dli~dL~~AL~ 539 (541)
.++++||+++. +.+ +.++.|.++|+
T Consensus 363 ---------------------~~~~iRi~~~~-~~~~~~~~i~~l~~~l~ 390 (394)
T PRK06836 363 ---------------------CPGYFRLSYCV-DTETIERSLPAFEKLAK 390 (394)
T ss_pred ---------------------CCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 13689999984 333 34445555554
No 178
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.89 E-value=1.6e-20 Score=198.36 Aligned_cols=257 Identities=15% Similarity=0.134 Sum_probs=185.0
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC----
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al-l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
.|.++++++.++++.|.+.+++++||++|+.+++.++ ++|||+||++.++|.++...+ ...|++++++|.+
T Consensus 30 g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~----~~~G~~~v~vd~d~~~~ 105 (376)
T TIGR02379 30 GPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF----VLRGAKIVFVDIRPDTM 105 (376)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcC
Confidence 5789999999999999999999999999999999887 899999999999999876443 3458888888643
Q ss_pred --CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc--cccccCCcEEEECCc--c
Q 009172 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ--KALSLGADLVLHSAT--K 357 (541)
Q Consensus 284 --dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~--~~l~~gaDivv~S~s--K 357 (541)
|++++++++++ +||+|+ |+||+|...|+++|.++|+++|++||+|++++.+... .+...-.|+.++|++ |
T Consensus 106 ~~d~~~le~~i~~-~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K 181 (376)
T TIGR02379 106 NIDETLIESAITH-RTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETK 181 (376)
T ss_pred CCCHHHHHHhcCc-CceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCCCCC
Confidence 68899999987 599986 5788999999999999999999999999998765322 223222488888875 5
Q ss_pred ccCCCCCceEEEEEe-ChHHHHHHHHHhhh-------------------cC--CCccHHHHHHHHHhHHHHHHHHHHHHH
Q 009172 358 FIGGHNDVLAGSISG-SGKLVTQIRNLHHV-------------------LG--GALNPNAAYLIIRGMKTLHLRVQQQNS 415 (541)
Q Consensus 358 ~lgg~g~v~gG~vv~-~~~li~~l~~~~~~-------------------~g--~~~s~~~a~l~l~~l~tl~~r~~~~~~ 415 (541)
.+..++ .||+++. ++++.++++..+.. .| ..++...+.+++..|+.++...+++.+
T Consensus 182 ~l~~g~--~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~ 259 (376)
T TIGR02379 182 NYTSGG--EGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLA 259 (376)
T ss_pred cCcccC--CceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHH
Confidence 555332 2576655 47888887765431 11 124456677777889999999999999
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC
Q 009172 416 TALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 485 (541)
Q Consensus 416 na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~ 485 (541)
+++.+.+.|..++....+..|..+....+ .-.++.+.++.. ....++++.|+..||.+..
T Consensus 260 ~~~~y~~~L~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~~~-~~r~~l~~~L~~~gI~~~~ 319 (376)
T TIGR02379 260 TWQLYQDALKPLEEKGIIELPSIPNGCQH---------NAHMFYIKLKDE-DDRNELIKYLKEQEIMAVF 319 (376)
T ss_pred HHHHHHHHhccCCcCCeeeCCCCCCCCee---------eeEEEEEEECCc-CCHHHHHHHHHHCCCCccc
Confidence 99999998877542111223332211110 113566777532 1345667777766776554
No 179
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.89 E-value=4.7e-21 Score=199.78 Aligned_cols=271 Identities=18% Similarity=0.209 Sum_probs=182.0
Q ss_pred CCCCCchhHHHHHHHHHHHhCCC--cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAE--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~--~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
+.||+++. .+|+++||+++|.. +.|++++|+ +++.++ ..++++|| |+++.|+|..... .++..|+++..+
T Consensus 48 ~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l-~~~~~~g~-v~v~~P~y~~y~~----~~~~~g~~~~~v 120 (339)
T PRK06959 48 WRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRAL-PALLPRGR-VGIAPLAYSEYAP----AFARHGHRVVPL 120 (339)
T ss_pred HHhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHH-HHhcCCCe-EEEcCCCcHHHHH----HHHHCCCEEEee
Confidence 45688887 99999999999973 567777776 788755 45678887 8889999987653 345568888877
Q ss_pred CCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHH---HHhCCCEEEEEcCCCCCCccccc----ccCCcEEEE
Q 009172 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDL---CHKKGAIVCIDGTFATPLNQKAL----SLGADLVLH 353 (541)
Q Consensus 281 d~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~l---a~~~gillvvDea~a~~~~~~~l----~~gaDivv~ 353 (541)
+.++ +. +.+ .++++++++||||||.+++.+++.++ |+++++++|+||+|.......++ ....-+++.
T Consensus 121 ~~~~-~~----~~~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~ 194 (339)
T PRK06959 121 DEAA-DT----LPA-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLR 194 (339)
T ss_pred cccc-hh----ccc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEe
Confidence 6543 22 333 36899999999999999997776665 45789999999998765321111 122348999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHHhCCCc
Q 009172 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAHPKV 430 (541)
Q Consensus 354 S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~---tl~~r~~~~~~na~~la~~L~~~p~v 430 (541)
|+||.+|-+| +..||+++++++++.+++....++ .+.....++...++ ......++..++++.+.+.|+++. +
T Consensus 195 SfSK~~gl~G-lRiGy~v~~~~li~~l~~~~~~~~--vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~ 270 (339)
T PRK06959 195 SVGKFFGLAG-VRAGFVLAAPALLAALRDALGAWT--VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHG-F 270 (339)
T ss_pred cChhhcCCcc-hheEEEecCHHHHHHHHHhcCCCC--CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-C
Confidence 9999998665 457999999999999988765443 33444333333332 233334555567788888888752 1
Q ss_pred eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHh
Q 009172 431 KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLK 510 (541)
Q Consensus 431 ~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~ 510 (541)
. + ++ .++++++.++. ..++.+.|...|+.+.. +
T Consensus 271 ~-~-~~-----------------~~~f~~~~~~~----~~~l~~~l~~~GI~vr~--~---------------------- 303 (339)
T PRK06959 271 A-V-HA-----------------TPLFSWTDDPR----AAALHAALARRGIWTRY--F---------------------- 303 (339)
T ss_pred C-c-cC-----------------cceEEEEeCCC----HHHHHHHHHhCCeEEEE--C----------------------
Confidence 1 1 01 24577887752 23455666555665531 0
Q ss_pred cCCCCCeEEEEe-cC-CCHHHHHHHHHHHHhh
Q 009172 511 YGIMDNLVRFSF-GV-EDFEDLKADVLQALHA 540 (541)
Q Consensus 511 ~gi~~~~IRlSv-G~-Ed~edli~dL~~AL~~ 540 (541)
+ ..++||||+ |. ++.+.+++.|++.++.
T Consensus 304 -~-~~~~lRisi~~~~~e~~~l~~al~~~~~~ 333 (339)
T PRK06959 304 -A-PPPSVRFGLPADEAEWQRLEDALAECVPT 333 (339)
T ss_pred -C-CCCeEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 0 135899999 44 4567787777776653
No 180
>PRK05839 hypothetical protein; Provisional
Probab=99.88 E-value=1.4e-20 Score=198.88 Aligned_cols=273 Identities=18% Similarity=0.137 Sum_probs=168.0
Q ss_pred CCCCCch-hHHHHHHHHHHH----hCC---CcEEEeCCHH-HHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhhccc
Q 009172 204 YGRYGNP-TTVVVEEKMSAL----EGA---ESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 204 Y~R~~~p-~~~~Le~~LA~l----~g~---~~~i~~sSG~-~Ai~~al~all--~~GD~VIv~~~~y~~~~~~~~~~l~~ 272 (541)
+.+|+.+ ...+|++++|++ +|. .+.|++++|+ +++..++..++ ++||.|+++.|+|..... .+..
T Consensus 53 ~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~----~~~~ 128 (374)
T PRK05839 53 LNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEG----AAIA 128 (374)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHH----HHHh
Confidence 3445544 345677776654 352 3556666665 88888877764 579999999999988653 3456
Q ss_pred CCcEEEEeCCC-----CHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc--
Q 009172 273 MGITATVIDPA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-- 342 (541)
Q Consensus 273 ~Gi~v~~vd~~-----dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~-- 342 (541)
.|+++..++.+ +++..+..+ + ++|+|++++||||||.+++ +++|+++|+++|++||+||+|.......
T Consensus 129 ~g~~v~~v~~~~~~~~~~d~~~~~~-~-~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~ 206 (374)
T PRK05839 129 SRAKVLLMPLTKENDFTPSLNEKEL-Q-EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPP 206 (374)
T ss_pred cCCEEEEeecccccCCcCCcchhhh-c-cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCC
Confidence 68888887642 122222223 3 4899999999999999998 5577777889999999999987532111
Q ss_pred -c-c---------ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHH
Q 009172 343 -A-L---------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHL 408 (541)
Q Consensus 343 -~-l---------~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l---~tl~~ 408 (541)
. . ..+.-+++.|+||.++.+| ...||++++++++++++......+...+......+...+ +.+..
T Consensus 207 ~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G-lRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 285 (374)
T PRK05839 207 PSLLEASILVGNESFKNVLVINSISKRSSAPG-LRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEF 285 (374)
T ss_pred CCHhhhhcccCccccCcEEEEeccccccCCcc-ceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHH
Confidence 1 1 1134588999999987766 468999999999988877654444333333333322222 12222
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeecCCC
Q 009172 409 RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPSFGG 487 (541)
Q Consensus 409 r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~-~~~iavS~G~ 487 (541)
..++..++.+.+.+.| ++ ..| ..|.++|++++.. ..|.+.+. ..++.+..|.
T Consensus 286 ~~~~~~~~~~~~~~~l----~~---~~p----------------~gg~fi~~~~~~~----~~~~~~l~~~~gi~v~pg~ 338 (374)
T PRK05839 286 FRNIYAKNLKLAREIL----GI---TIP----------------PATFYVWLPVDND----EEFTKKLYQNEGIKVLPGS 338 (374)
T ss_pred HHHHHHHHHHHHHHhc----CC---CCC----------------CeeEEEEEeCCCh----HHHHHHHHHHCCEEEeCch
Confidence 2233334444333333 11 111 2577899998643 23444442 3566666654
Q ss_pred cccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 009172 488 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL 530 (541)
Q Consensus 488 ~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edl 530 (541)
.+.. .+..++++|||++. +.+++
T Consensus 339 ~f~~-------------------~~~~~~~iRis~~~-~~~~~ 361 (374)
T PRK05839 339 FLGR-------------------NGIGKGYVRIALVY-DTPKL 361 (374)
T ss_pred hhCC-------------------CCCCCCeEEEEecC-CHHHH
Confidence 3210 01235899999985 34443
No 181
>PRK07908 hypothetical protein; Provisional
Probab=99.88 E-value=1.4e-20 Score=196.61 Aligned_cols=276 Identities=17% Similarity=0.171 Sum_probs=183.2
Q ss_pred CCCCch-hHHHHHHHHHHHhCC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 205 GRYGNP-TTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~g~-~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
..|+.+ ...+||+++|+++|. .+.|++++|+ +++.+++. +++| .+++..|+|.... ..++..|+++..++
T Consensus 52 ~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~-~viv~~P~y~~~~----~~~~~~G~~i~~v~ 124 (349)
T PRK07908 52 AAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR-RAAVVHPSFTEPE----AALRAAGIPVHRVV 124 (349)
T ss_pred hcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-eEEEeCCCChHHH----HHHHHcCCEEEeec
Confidence 345543 578899999999986 3456565555 89988887 5675 5666789987654 34456788887775
Q ss_pred CC-----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCccc--c---cccCCcEE
Q 009172 282 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--A---LSLGADLV 351 (541)
Q Consensus 282 ~~-----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~--~---l~~gaDiv 351 (541)
.+ |++ .+++ ++++|++++|+||||.+++.++|.++|++ +.++|+||+|...+... + ......++
T Consensus 125 ~~~~~~~d~~----~l~~-~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~ 198 (349)
T PRK07908 125 LDPPFRLDPA----AVPD-DADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLV 198 (349)
T ss_pred cCcccCcChh----Hhcc-CCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEE
Confidence 43 333 3344 58999999999999999999999999975 78899999986432111 1 12233578
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHh
Q 009172 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG-----MKTLHLRVQQQNSTALRMAEILEA 426 (541)
Q Consensus 352 v~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~-----l~tl~~r~~~~~~na~~la~~L~~ 426 (541)
+.|+||.++.+| +..|++++++++++.++.....+. .++.....+... .+.+....++..++++.+.+.|++
T Consensus 199 i~S~SK~~~l~G-lRiG~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 275 (349)
T PRK07908 199 LRSLTKTWSLAG-LRVGYALGAPDVLARLTRGRAHWP--VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA 275 (349)
T ss_pred EeecccccCCcc-ceeeeeecCHHHHHHHHhcCCCCC--ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 889999998555 357999999999988876544322 233222222221 223333445555667778888877
Q ss_pred CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHH
Q 009172 427 HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQS 506 (541)
Q Consensus 427 ~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~ 506 (541)
+ .+. +..|. .|+++|+.+++ ...+.+.++..++.+..|..+.
T Consensus 276 ~-~~~-~~~p~----------------~g~~~~~~~~~----~~~~~~~l~~~gI~v~~g~~f~---------------- 317 (349)
T PRK07908 276 V-GAR-VVDPA----------------AAPFVLVRVPD----AELLRKRLRERGIAVRRGDTFP---------------- 317 (349)
T ss_pred C-CcE-eccCC----------------CceEEEEECCc----HHHHHHHHHhCCEEEEECCCCC----------------
Confidence 6 332 22221 47889999874 2345555555577777664321
Q ss_pred HHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 009172 507 ERLKYGIMDNLVRFSFGV-EDFEDLKADVLQALH 539 (541)
Q Consensus 507 ~~~~~gi~~~~IRlSvG~-Ed~edli~dL~~AL~ 539 (541)
+..+++||||++. ++.+.+++.|++.+.
T Consensus 318 -----~~~~~~vRis~~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 318 -----GLDPDYLRLAVRPRAEVPVLVQALAEILK 346 (349)
T ss_pred -----CCCCCeEEEEeCCCccHHHHHHHHHHHHh
Confidence 1235799999986 477888888877664
No 182
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.88 E-value=3.3e-20 Score=197.57 Aligned_cols=256 Identities=19% Similarity=0.229 Sum_probs=178.7
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc---------CC-CEEEEcCCCCcchHHHHHhh-------
Q 009172 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRKTRIFIETV------- 269 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~---------~G-D~VIv~~~~y~~~~~~~~~~------- 269 (541)
+.++...+|+++|+++.|.+.+++++||++|+..++..+.. +| ++||+....|++........
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~ 159 (401)
T PRK00854 80 FRNDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDAR 159 (401)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcccc
Confidence 45688899999999999988999999999999999987642 23 68888888877743222111
Q ss_pred --cccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCCCccc-
Q 009172 270 --LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLNQK- 342 (541)
Q Consensus 270 --l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~~~~~- 342 (541)
.......+.+++..|++++++++.+ ++++|++|+|+||+|.+.| +++|.++|++||+++|+||++.. +...
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~le~~i~~-~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g-~g~~g 237 (401)
T PRK00854 160 GGFGPFTPGFRVVPFGDAEALEAAITP-NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTG-LGRTG 237 (401)
T ss_pred ccCCCCCCCeEEeCCCCHHHHHHHhCC-CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC-CCCCc
Confidence 1122345667777899999999987 5999999999999999997 99999999999999999999863 2211
Q ss_pred ------ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHH
Q 009172 343 ------ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQN 414 (541)
Q Consensus 343 ------~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~--r~~~~~ 414 (541)
......|+++. +|+++++. ..+|++++++++++.++..........++..+++++..|+.+.. ..++..
T Consensus 238 ~~~~~~~~g~~~D~~~~--~K~l~gg~-~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~ 314 (401)
T PRK00854 238 KLLAEEHEGIEADVTLI--GKALSGGF-YPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAA 314 (401)
T ss_pred hHhHHhhcCCCCCEEEe--cccccCCc-cCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 12234688875 59998653 34688999998888765322211222467777777778877654 345555
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceee
Q 009172 415 STALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 483 (541)
Q Consensus 415 ~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iav 483 (541)
++.+.+.+.|++.... .+ ...++.|.++.|.+.++......|.+.|...++.+
T Consensus 315 ~~~~~l~~~L~~~~~~-~~---------------~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v 367 (401)
T PRK00854 315 EMGAYFLEGLRSIRSN-IV---------------REVRGRGLMLAVELEPEAGGARQYCEALKERGLLA 367 (401)
T ss_pred HHHHHHHHHHHhhccC-ce---------------EEEeccceEEEEEEecCchhHHHHHHHHHHCCeEE
Confidence 6666777777654210 00 11134678888887543334567777776555443
No 183
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.88 E-value=2.9e-20 Score=202.87 Aligned_cols=282 Identities=13% Similarity=0.182 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHhC--------C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 212 TVVVEEKMSALEG--------A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 212 ~~~Le~~LA~l~g--------~-~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
..+|+++||++++ . .+.|++++|+ +|+.+++.++++|||.|++++|.|++....+. ...|+++..++
T Consensus 96 ~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~---~~~G~~vv~v~ 172 (496)
T PLN02376 96 LKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLR---WRTGVEIIPVP 172 (496)
T ss_pred cHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHH---hhCCCEEEEEe
Confidence 4568888887764 2 2445555655 99999999999999999999999998653221 14588877775
Q ss_pred C-------CCHHHHHHhcc-----CCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc----
Q 009172 282 P-------ADMEGLEAALN-----NNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK---- 342 (541)
Q Consensus 282 ~-------~dle~Le~ai~-----~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~---- 342 (541)
. .|+++++++++ ..++|+|++++|+||||.+++ +++|+++|+++|++||+||+|+......
T Consensus 173 ~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~ 252 (496)
T PLN02376 173 CSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFV 252 (496)
T ss_pred CCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcc
Confidence 4 25777765531 125899999999999999998 5577888999999999999987643211
Q ss_pred c-ccc---------CCc--EEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH---H
Q 009172 343 A-LSL---------GAD--LVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---L 406 (541)
Q Consensus 343 ~-l~~---------gaD--ivv~S~sK~lgg~g~v~gG~vv~~-~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---l 406 (541)
+ ... ..+ +++.|+||.+|.+| ...|+++++ +.+.+.++... .++. .+....+++...++. +
T Consensus 253 si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpG-lRvG~li~~~~~l~~~~~~~~-~~~~-vs~~~Q~a~~~~L~d~~~~ 329 (496)
T PLN02376 253 SVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPG-FRVGIVYSFNDSVVSCARKMS-SFGL-VSSQTQLMLASMLSDDQFV 329 (496)
T ss_pred cHHHhhccccccccCCCeEEEEEeccccCCCCc-ceEEEEEECCHHHHHHHHHHh-hcCC-CCHHHHHHHHHHhCChhHH
Confidence 1 001 112 46799999998666 357888884 55555544433 2332 344444443333321 1
Q ss_pred HHH----HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH------HHHHHHHHHc
Q 009172 407 HLR----VQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL------TATIKFIDAL 476 (541)
Q Consensus 407 ~~r----~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~------~~~~~~l~~L 476 (541)
... .++..+..+.+.+.|+++ ++. + .+ ...|.++|++++... +...+|.+.+
T Consensus 330 ~~~l~~~r~~l~~r~~~l~~~L~~~-gi~-~-~~---------------~~aG~flwi~l~~~~~~~~~~~~e~~l~~~l 391 (496)
T PLN02376 330 DNFLMESSRRLGIRHKVFTTGIKKA-DIA-C-LT---------------SNAGLFAWMDLRHLLRDRNSFESEIELWHII 391 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-cC---------------CCceEEEEEEchhhhccCCchhHHHHHHHHH
Confidence 111 223344555566677654 221 1 11 115678899986311 1223444444
Q ss_pred -CCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHH---HHHHHHHH
Q 009172 477 -KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDL---KADVLQAL 538 (541)
Q Consensus 477 -~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edl---i~dL~~AL 538 (541)
+..++.++.|..+.. -.++++||+++..+.+.+ ++.|.+++
T Consensus 392 l~~~gV~v~pGs~F~~---------------------~~~g~~Ri~fa~~~~~~l~~al~rl~~~l 436 (496)
T PLN02376 392 IDKVKLNVSPGSSFRC---------------------TEPGWFRICFANMDDDTLHVALGRIQDFV 436 (496)
T ss_pred HHcCCEEEeCccccCC---------------------CCCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 234777777754310 125799999996333443 44444444
No 184
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=8.4e-21 Score=197.59 Aligned_cols=267 Identities=15% Similarity=0.177 Sum_probs=180.0
Q ss_pred CCCCCchhHHHHHHHHHHHhC---C-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEE
Q 009172 204 YGRYGNPTTVVVEEKMSALEG---A-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITAT 278 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g---~-~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~ 278 (541)
+++|+.+...+|+++++++++ . ++.|++++|+ +++.+++.++ |+|++.+|+|.... ..++..|+++.
T Consensus 50 ~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~----~~~~~~g~~~~ 121 (335)
T PRK14808 50 LRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYR----IFAKAVGAKFL 121 (335)
T ss_pred hhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh----CcEEECCCCHHHHH----HHHHHcCCeEE
Confidence 566777788999999999998 3 3456666665 8999988876 78999999998765 34455688888
Q ss_pred EeCCCC---HHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCccc--c-c-ccCCcEE
Q 009172 279 VIDPAD---MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK--A-L-SLGADLV 351 (541)
Q Consensus 279 ~vd~~d---le~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~--~-l-~~gaDiv 351 (541)
.++.++ ++.. .+. ++++|++++||||||.+++.+++.+++ +++++||+||+|....... + . ....-++
T Consensus 122 ~v~~~~~~~~~~~--~~~--~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~ 196 (335)
T PRK14808 122 EVPLTKDLRIPEV--NVG--EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAV 196 (335)
T ss_pred EecCCCcCCCChh--Hcc--CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEE
Confidence 776431 1111 232 378999999999999999999999998 5799999999987542111 1 1 1224588
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCC
Q 009172 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM---KTLHLRVQQQNSTALRMAEILEAHP 428 (541)
Q Consensus 352 v~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l---~tl~~r~~~~~~na~~la~~L~~~p 428 (541)
+.|+||.++..| ...|++++++++++.+......++ .+.....++...+ +.+..+.+...++.+.+.+.|+++.
T Consensus 197 ~~S~SK~~~l~G-lRvG~~v~~~~~~~~l~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g 273 (335)
T PRK14808 197 IRTFSKAFSLAA-QRIGYVVSSEKFIDAYNRVRLPFN--VSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMG 273 (335)
T ss_pred EEechhhccCcc-cceEEEEeCHHHHHHHHHhcCCCC--CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999999555 357999999999998877653333 2333333333333 3344445555666777888888752
Q ss_pred CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHH
Q 009172 429 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSER 508 (541)
Q Consensus 429 ~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~ 508 (541)
+. + +| ..|+++++.+++. ...++.+.+...|+.+.. +
T Consensus 274 -~~-~-~~----------------~~g~f~~~~l~~~--~~~~~~~~l~~~Gi~V~~--~-------------------- 310 (335)
T PRK14808 274 -YR-I-TD----------------SRGNFVFIFMEKE--EKERLLEHLRAKNIAVRS--F-------------------- 310 (335)
T ss_pred -CE-E-CC----------------CCCeEEEEeCCCc--cHHHHHHHHHHCCeEEEE--C--------------------
Confidence 22 2 22 1477899998742 224566666655655531 0
Q ss_pred HhcCCCCCeEEEEecCC-CHHHHHHHHH
Q 009172 509 LKYGIMDNLVRFSFGVE-DFEDLKADVL 535 (541)
Q Consensus 509 ~~~gi~~~~IRlSvG~E-d~edli~dL~ 535 (541)
.+.||||+|.. +.+.+++.|+
T Consensus 311 ------~~~~Risi~~~~~~~~~~~~l~ 332 (335)
T PRK14808 311 ------REGVRITIGKREENDMILKELE 332 (335)
T ss_pred ------CCCeEEecCCHHHHHHHHHHHH
Confidence 24699999974 4455555443
No 185
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=1.5e-20 Score=195.24 Aligned_cols=210 Identities=21% Similarity=0.244 Sum_probs=172.8
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC----
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al-l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
.|.+.++|+++|++.|.+.++.++||+.|+.++|+++ ++|||+||++..+|.+|.+.+ -..|.+.+++|.+
T Consensus 33 G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i----~~~Ga~PVFvDid~~T~ 108 (374)
T COG0399 33 GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAV----LLVGAKPVFVDIDPDTL 108 (374)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHH----HHcCCeEEEEecCCccc
Confidence 5889999999999999999999999999999999966 699999999999999987543 3458899999864
Q ss_pred --CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccC--CcEEEECC--cc
Q 009172 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLG--ADLVLHSA--TK 357 (541)
Q Consensus 284 --dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~g--aDivv~S~--sK 357 (541)
|++.||++|++ +||+|+. .+-.|...|+++|.++|++||++||+|.+++.+...+....| .|+.++|| +|
T Consensus 109 nid~~~ie~aIt~-~tKAIip---Vhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K 184 (374)
T COG0399 109 NIDPDLIEAAITP-RTKAIIP---VHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATK 184 (374)
T ss_pred CCCHHHHHHHccc-CCeEEEE---ehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCC
Confidence 89999999998 4999986 456699999999999999999999999998776544433333 48888887 68
Q ss_pred ccCCCCCceEEEEEeCh-HHHHHHHHHhhh--------------c--CCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009172 358 FIGGHNDVLAGSISGSG-KLVTQIRNLHHV--------------L--GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRM 420 (541)
Q Consensus 358 ~lgg~g~v~gG~vv~~~-~li~~l~~~~~~--------------~--g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~l 420 (541)
.+.... ||+++.++ ++.++++.++.. . ...++...+++.+..|+.++...++..++++.+
T Consensus 185 ~ittgE---GGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y 261 (374)
T COG0399 185 NLTTGE---GGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIY 261 (374)
T ss_pred CccccC---ceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887553 78888765 677776654321 1 123556778888899999999999999999999
Q ss_pred HHHHHhCCC
Q 009172 421 AEILEAHPK 429 (541)
Q Consensus 421 a~~L~~~p~ 429 (541)
.+.|++.+.
T Consensus 262 ~~~l~~~~~ 270 (374)
T COG0399 262 AEALKGLPG 270 (374)
T ss_pred HHHhhcCCC
Confidence 999998775
No 186
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.88 E-value=6.1e-20 Score=194.01 Aligned_cols=257 Identities=14% Similarity=0.101 Sum_probs=185.7
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC-----
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al-l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----- 282 (541)
.+..+++++.+++++|.+++++++||++|+.+++.++ +++||+|+++.++|.++... +...|+++++++.
T Consensus 30 ~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~----~~~~G~~~v~~d~d~~~~ 105 (375)
T PRK11706 30 GGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANA----FVLRGAKIVFVDIRPDTM 105 (375)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHH----HHHcCCEEEEEecCCCcC
Confidence 4678999999999999999999999999998887765 79999999999999987643 3456888888864
Q ss_pred -CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc--ccccccCCcEEEECCc--c
Q 009172 283 -ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKALSLGADLVLHSAT--K 357 (541)
Q Consensus 283 -~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~--~~~l~~gaDivv~S~s--K 357 (541)
.|++++++++++ ++|+|++. |++|...|+++|.++|+++|++||+|++++.+.. ..+.....|+.++|++ |
T Consensus 106 ~~d~~~le~~i~~-~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K 181 (375)
T PRK11706 106 NIDETLIEAAITP-KTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETK 181 (375)
T ss_pred CcCHHHHHHhcCC-CCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCCc
Confidence 368999999987 59999874 5789999999999999999999999999876542 2333333588888987 9
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHHhhh-------------------cCC--CccHHHHHHHHHhHHHHHHHHHHHHHH
Q 009172 358 FIGGHNDVLAGSISGSGKLVTQIRNLHHV-------------------LGG--ALNPNAAYLIIRGMKTLHLRVQQQNST 416 (541)
Q Consensus 358 ~lgg~g~v~gG~vv~~~~li~~l~~~~~~-------------------~g~--~~s~~~a~l~l~~l~tl~~r~~~~~~n 416 (541)
.++.+. .|++++.++++.++++..+.. .|. .++...+..++..++.++...++..++
T Consensus 182 ~l~~g~--gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~ 259 (375)
T PRK11706 182 NYTAGE--GGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLAL 259 (375)
T ss_pred cccccC--CeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 997632 244555567888777655421 121 234566777778888888888888899
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC
Q 009172 417 ALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 485 (541)
Q Consensus 417 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~ 485 (541)
++.+.+.|.+.+....+..|..+... .....++++.++.+ ....++++.|...|+.++.
T Consensus 260 ~~~~~~~L~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~r~~l~~~L~~~gI~~~~ 318 (375)
T PRK11706 260 WQRYYDALAPLAEAGRIELPSIPDDC---------KHNAHMFYIKLRDL-EDRSALINFLKEAGIMAVF 318 (375)
T ss_pred HHHHHHHhcCCCcCCeeecCCCCCCC---------ceeeEEEEEEECCc-CCHHHHHHHHHHCCCCccc
Confidence 99999999876532223333221100 00223667777532 2345667777666766554
No 187
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=3.7e-20 Score=198.16 Aligned_cols=220 Identities=20% Similarity=0.227 Sum_probs=153.5
Q ss_pred CCCCCCCC--CchhHHHHHH----HHHHHhCCCcEEE-eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhccc
Q 009172 200 ASFEYGRY--GNPTTVVVEE----KMSALEGAESTVI-MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 200 ~~~~Y~R~--~~p~~~~Le~----~LA~l~g~~~~i~-~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~ 272 (541)
.++.++|+ ++|++++||+ ++++++|.+.+++ ++||+.|+.+++.+++++||+|+++...|++....- .....
T Consensus 58 ~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g-~~~~~ 136 (416)
T PRK13034 58 EGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHG-AKVSL 136 (416)
T ss_pred CCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecC-Cccee
Confidence 35667787 6899999999 9999999999865 589999999999999999999999999998732100 00000
Q ss_pred CCc--EEEEeCC------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc----
Q 009172 273 MGI--TATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---- 340 (541)
Q Consensus 273 ~Gi--~v~~vd~------~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~---- 340 (541)
.+. +...++. .|++++++.++..++|+|+++.+. +|...|+++|.++|+++|+++++|++++.+..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~ 214 (416)
T PRK13034 137 SGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELDFARFREIADEVGALLMVDMAHIAGLVAAGE 214 (416)
T ss_pred ccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccCHHHHHHHHHHcCCEEEEeCcccccCcccCC
Confidence 111 1122332 588999988854458999986654 57888999999999999999999999654432
Q ss_pred -ccccccCCcEEEECCccccCCCCCceEEEEEeChH-HHHHHHHHhhhcC---CCccHHHHHHHHHhHHHH----HHHHH
Q 009172 341 -QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHVLG---GALNPNAAYLIIRGMKTL----HLRVQ 411 (541)
Q Consensus 341 -~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~-li~~l~~~~~~~g---~~~s~~~a~l~l~~l~tl----~~r~~ 411 (541)
..++. ++|++++|+||+++|+. ||+++++++ +.++++.... .| ....+..+.++...++.+ ..+.+
T Consensus 215 ~~~~~~-~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~ 289 (416)
T PRK13034 215 HPNPFP-HAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKINSAVF-PGLQGGPLMHVIAAKAVAFGEALQPEFKTYAK 289 (416)
T ss_pred CCCCCC-CceEEEEeCcccCCCCC---CeEEEECcHHHHHHHHhhcC-CcccCCccHHHHHHHHHHHHHHhChhHHHHHH
Confidence 22333 58999999999997764 687777654 4444544321 12 122333333332222222 23357
Q ss_pred HHHHHHHHHHHHHHhC
Q 009172 412 QQNSTALRMAEILEAH 427 (541)
Q Consensus 412 ~~~~na~~la~~L~~~ 427 (541)
+..++++++++.|.+.
T Consensus 290 ~l~~~a~~l~~~L~~~ 305 (416)
T PRK13034 290 QVIANAQALAEVLKER 305 (416)
T ss_pred HHHHHHHHHHHHHHHc
Confidence 7778999999988875
No 188
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.88 E-value=1.7e-20 Score=200.64 Aligned_cols=299 Identities=14% Similarity=0.136 Sum_probs=182.8
Q ss_pred CCCchh-HHHHHHHHHHHh----CC---CcEEEeCCHH-HHHHHHHHHhcc-----CCCEEEE-cCCCCcchHHHHHh--
Q 009172 206 RYGNPT-TVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALVP-----AGGHIVT-TTDCYRKTRIFIET-- 268 (541)
Q Consensus 206 R~~~p~-~~~Le~~LA~l~----g~---~~~i~~sSG~-~Ai~~al~all~-----~GD~VIv-~~~~y~~~~~~~~~-- 268 (541)
+|+++. ..+|+++||+++ |. .+.|++++|+ +++.+++.+++. +||.|++ .+|+|++.......
T Consensus 69 ~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~ 148 (416)
T PRK09440 69 NYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEED 148 (416)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccC
Confidence 455443 567888888876 32 2456666665 899999999885 6899999 69999886542211
Q ss_pred hcccCCcEEEEeC------CCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCC
Q 009172 269 VLPKMGITATVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 269 ~l~~~Gi~v~~vd------~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~ 339 (541)
.+...+..+..++ ..|+++|+ +.+ +++++++++|+||||.+++ +++|+++|++++++||+||+|..+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~-~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~ 225 (416)
T PRK09440 149 LFVSYRPNIELLPEGQFKYHVDFEHLH--IDE-DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPF 225 (416)
T ss_pred ceeecccccccccccccccCCCHHHcc--cCC-CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccC
Confidence 1122233332222 23677776 344 5899999999999999998 5578888999999999999997532
Q ss_pred cc----c--ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH--HHHH--
Q 009172 340 NQ----K--ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT--LHLR-- 409 (541)
Q Consensus 340 ~~----~--~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t--l~~r-- 409 (541)
.. . +...+.-|++.|+||+ +.+| ...||+++++++++.+...........+.+...++...++. +...
T Consensus 226 ~~~~~~~~~~~~~~~vI~~~SfSK~-~~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~ 303 (416)
T PRK09440 226 PGIIFSEATPLWNPNIILCMSLSKL-GLPG-VRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSE 303 (416)
T ss_pred CCcchhhcCccccCCeEEEeccccc-CCCc-ceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHH
Confidence 21 1 1112345889999996 5554 56899999999999888776655545555555554444432 1111
Q ss_pred ---HHHHHHHHHHHHHHHHhC-CCce-EEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeec
Q 009172 410 ---VQQQNSTALRMAEILEAH-PKVK-RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 484 (541)
Q Consensus 410 ---~~~~~~na~~la~~L~~~-p~v~-~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS 484 (541)
.+...++...+.+.|.++ +.+. .+..| ..|.++|++++.......+|.+.+...++.+.
T Consensus 304 ~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p----------------~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~ 367 (416)
T PRK09440 304 TVIRPFYRQKVQLAIALLRRYLPDEPCLIHKP----------------EGAIFLWLWFKDLPITTEELYQRLKARGVLVV 367 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCeEEecC----------------CCceEEEEECCCCCCCHHHHHHHHHHCCEEEe
Confidence 122234455566667654 2221 12222 15778899987411123456666655677777
Q ss_pred CCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHh
Q 009172 485 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALH 539 (541)
Q Consensus 485 ~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~--Ed~edli~dL~~AL~ 539 (541)
.|..+.. .... ..+...+++|||++. ++.++.++.|.++++
T Consensus 368 pg~~F~~----~~~~----------~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~ 410 (416)
T PRK09440 368 PGHYFFP----GLDE----------DWPHAHQCIRMNYVQDDEEIEKGIAILAEEVE 410 (416)
T ss_pred chHhhCC----CCcc----------ccCCcCceEEEEecCCHHHHHHHHHHHHHHHH
Confidence 7654321 0000 000013689999974 334555666666654
No 189
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.87 E-value=5.2e-20 Score=193.29 Aligned_cols=258 Identities=18% Similarity=0.157 Sum_probs=172.4
Q ss_pred hhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC---
Q 009172 210 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~----~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
...+++++.+++++|++ ..++++||+++++.++.+++.+||++++..+.+.+.. +...++..|++++.++.
T Consensus 35 ~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~a~~~g~~~~~v~~~~~ 112 (363)
T TIGR02326 35 IVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGAR--IVQIAEYLGIPHHVVDTGEV 112 (363)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCC
Confidence 45778899999999984 2456678889999999999889888766555544422 22445677888887754
Q ss_pred --CCHHHHHHhccCC-CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEECCccc
Q 009172 283 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (541)
Q Consensus 283 --~dle~Le~ai~~~-~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~S~sK~ 358 (541)
.|+++++++++.+ ++++|++.++.||||.+.|+++|.++||++|+++++|++++.+. ..+...+++|+++.|++|+
T Consensus 113 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~ 192 (363)
T TIGR02326 113 EPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKC 192 (363)
T ss_pred CCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCccc
Confidence 3789999998753 36788888999999999999999999999999999999876543 3444567899999999999
Q ss_pred cCCCCCceEEEEEeChHHHHHHHHHhh---------------hcC---CCccHHHHHHHHHhHHH------HHHHHHHHH
Q 009172 359 IGGHNDVLAGSISGSGKLVTQIRNLHH---------------VLG---GALNPNAAYLIIRGMKT------LHLRVQQQN 414 (541)
Q Consensus 359 lgg~g~v~gG~vv~~~~li~~l~~~~~---------------~~g---~~~s~~~a~l~l~~l~t------l~~r~~~~~ 414 (541)
++|+.+ .|+++.+++.++++..... ..+ .+.+....+.+..+++. ++.+.++..
T Consensus 193 l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~ 270 (363)
T TIGR02326 193 IQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQ 270 (363)
T ss_pred cccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 865532 5888898887765431000 001 12233333332333332 234556667
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCC
Q 009172 415 STALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 415 ~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-~~~~~~~l~~L~~~~iavS~G 486 (541)
+++.++.+.|+++ ++. +..+. . ...+.+++|.++.. ......+.+.|+..++.++.|
T Consensus 271 ~~~~~l~~~L~~~-g~~-~~~~~-----~--------~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g 328 (363)
T TIGR02326 271 QNQKTLVAGMRAL-GFE-PLLDD-----E--------IQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPG 328 (363)
T ss_pred HHHHHHHHHHHHc-CCe-eccCc-----c--------cCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECC
Confidence 7788888888775 232 11110 0 01234567887642 123345666666667776654
No 190
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.87 E-value=1.4e-20 Score=198.07 Aligned_cols=304 Identities=19% Similarity=0.213 Sum_probs=207.9
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC----
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al-l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
.+.++++|+++++++|.+.++.++||+.|+.+++.++ +++||+|+++..+|.++... ....|.+++++|.+
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~a----i~~~G~~pv~~Di~~~~~ 99 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASA----ILWAGAEPVFVDIDPETL 99 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHH----HHHTT-EEEEE-BETTTS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHH----HHHhccEEEEEeccCCcC
Confidence 5899999999999999999999999999999999998 68999999999999987744 34569999999853
Q ss_pred --CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccc--cccCCcEEEECC--cc
Q 009172 284 --DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA--LSLGADLVLHSA--TK 357 (541)
Q Consensus 284 --dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~--l~~gaDivv~S~--sK 357 (541)
|++++++++++ +||+|++ .+..|...|+++|.++|+++|++||.|.+++.+...+. ...-.|+.++|| +|
T Consensus 100 ~id~~~~~~~i~~-~t~ai~~---~h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~K 175 (363)
T PF01041_consen 100 NIDPEALEKAITP-KTKAILV---VHLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHPTK 175 (363)
T ss_dssp SB-HHHHHHHHHT-TEEEEEE---E-GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESSTTS
T ss_pred CcCHHHHHHHhcc-CccEEEE---ecCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCCCC
Confidence 79999999998 4999988 45669999999999999999999999999877654332 222249999998 59
Q ss_pred ccCCCCCceEEEEEeC-hHHHHHHHHHhhh-----------------cCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 009172 358 FIGGHNDVLAGSISGS-GKLVTQIRNLHHV-----------------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALR 419 (541)
Q Consensus 358 ~lgg~g~v~gG~vv~~-~~li~~l~~~~~~-----------------~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~ 419 (541)
.+..+. ||+++.+ +++.++++.++.. +...++++.+.+++..|+.++.++++..+++..
T Consensus 176 ~i~~ge---GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~ 252 (363)
T PF01041_consen 176 IITTGE---GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQR 252 (363)
T ss_dssp SS-SSS----EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCcCCC---CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 886553 7888876 4667777754421 113477889999999999999999999999999
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCCCcccceecCccc
Q 009172 420 MAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 420 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~-~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
+.+.|.+.+.+.....+.-... .....+.+.+++.. .....+++.|+..++.+.......+..+|...
T Consensus 253 y~~~L~~~~~~~~~~~~~~~~~-----------~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~ 321 (363)
T PF01041_consen 253 YREALAGIPGIKPPPIPDGAER-----------SSYYRFPIRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYR 321 (363)
T ss_dssp HHHHHTTGTTEEEEGCGTTTEE-----------BCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGT
T ss_pred HHHHHhcCCCcccccccccccc-----------cccccccccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHH
Confidence 9999999887755544332110 01224556666421 12456677776667777654422232223321
Q ss_pred ccc-----cCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 499 SYW-----DLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 499 ~~~-----~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
.+. .++..+ .+.+..|-|-+...-.++.++.+.+++
T Consensus 322 ~~~~~~~~~~P~ae----~l~~r~l~LP~~~~lt~edv~~I~~~i 362 (363)
T PF01041_consen 322 SYPYYAPGDLPNAE----RLSQRLLSLPIHPRLTEEDVDYIAEAI 362 (363)
T ss_dssp TGEEEETSSSHHHH----HHHHHEEEEEHSTTSCHHHHHHHHHHH
T ss_pred hcCccccCCCHHHH----HHHhCeEECcCCCCCCHHHHHHHhhcc
Confidence 111 122211 123457777777665566666666665
No 191
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.87 E-value=1.1e-19 Score=189.38 Aligned_cols=288 Identities=17% Similarity=0.163 Sum_probs=190.7
Q ss_pred hhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC---
Q 009172 210 PTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~----~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
+..+++++.+++++|.+ ..+++++|++++..++.+++.+||++++..+.+.+.. +...++..|.++..++.
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~~~ 108 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFSEY 108 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhH--HHHHHHHcCCceEEEecCCC
Confidence 67889999999999974 2446788999999999999988888666555443321 22345567887777653
Q ss_pred --CCHHHHHHhccCC-CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEECCccc
Q 009172 283 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (541)
Q Consensus 283 --~dle~Le~ai~~~-~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~S~sK~ 358 (541)
.|+++++++++++ ++++|++.+++|++|.+.|+++|.++|+++|+++|+|++++.+. ..+...+++|+++.|++|+
T Consensus 109 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~ 188 (355)
T TIGR03301 109 EPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKC 188 (355)
T ss_pred CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcc
Confidence 2789999998642 46788888999999999999999999999999999999865442 2344456899999999999
Q ss_pred cCCCCCceEEEEEeChHHHHHHHHHh---------------h--hcCCCccHHHHHHHHHhHHH------HHHHHHHHHH
Q 009172 359 IGGHNDVLAGSISGSGKLVTQIRNLH---------------H--VLGGALNPNAAYLIIRGMKT------LHLRVQQQNS 415 (541)
Q Consensus 359 lgg~g~v~gG~vv~~~~li~~l~~~~---------------~--~~g~~~s~~~a~l~l~~l~t------l~~r~~~~~~ 415 (541)
++|+.+ .|+++.++++++.++... . ....+.+....+.+...++. +..+.++..+
T Consensus 189 l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~ 266 (355)
T TIGR03301 189 LEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRR 266 (355)
T ss_pred cccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 865432 489999998887765210 0 01112333333333333332 3445556677
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCCcccceec
Q 009172 416 TALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQ 494 (541)
Q Consensus 416 na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-~~~~~~~l~~L~~~~iavS~G~~~sl~~~ 494 (541)
+++.+.+.|+++ ++. +..|. . ...+.+++|.++.. .....++.+.|...++.++.|+.
T Consensus 267 ~~~~~~~~L~~~-g~~-~~~~~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~------ 325 (355)
T TIGR03301 267 NRELLVDGLRAL-GFQ-PLLPE--R-----------WQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKL------ 325 (355)
T ss_pred HHHHHHHHHHHc-CCe-eecCC--C-----------CCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCcc------
Confidence 788888888775 332 22221 0 01344678888742 12344566666655666554421
Q ss_pred CcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 495 PAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
...+.|||++...++++.++.+.++|++
T Consensus 326 ------------------~~~~~iRis~~~~~~~~~i~~~~~~l~~ 353 (355)
T TIGR03301 326 ------------------TLADTFRIGTIGEIDAADIERLLEAIKD 353 (355)
T ss_pred ------------------ccccEEEEecCCCCCHHHHHHHHHHHHh
Confidence 0126899998655555556666666653
No 192
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.87 E-value=6.1e-20 Score=195.72 Aligned_cols=170 Identities=16% Similarity=0.184 Sum_probs=139.8
Q ss_pred chhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC---
Q 009172 209 NPTTVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~---~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
....+++++.+++++|.+ ..+++++|++++..++..++++||+|+++++.|.+.. +...+++.|++++.++.
T Consensus 41 ~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~ 118 (401)
T PLN02409 41 PALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWG 118 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCC
Confidence 456778899999999874 2567777889999999999999999999998887643 33556777888888753
Q ss_pred --CCHHHHHHhccC---CCeeEEEEeCCCCCCCcccCHHHHHHH--HHhCCCEEEEEcCCCCC-CcccccccCCcEEEEC
Q 009172 283 --ADMEGLEAALNN---NNVSLFFTESPTNPFLRCVDVKLVSDL--CHKKGAIVCIDGTFATP-LNQKALSLGADLVLHS 354 (541)
Q Consensus 283 --~dle~Le~ai~~---~~tklV~lesp~NPtG~v~di~~Ia~l--a~~~gillvvDea~a~~-~~~~~l~~gaDivv~S 354 (541)
.|++++++++++ +++++|++.++.||||.+.|+++|.++ |+++|+++|+|++++.+ ...+..++|+|+++.|
T Consensus 119 ~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s 198 (401)
T PLN02409 119 QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTG 198 (401)
T ss_pred CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEc
Confidence 368999999975 258999999999999999999999999 99999999999998754 3345556799999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHH
Q 009172 355 ATKFIGGHNDVLAGSISGSGKLVTQIRN 382 (541)
Q Consensus 355 ~sK~lgg~g~v~gG~vv~~~~li~~l~~ 382 (541)
.+|+++++. ..|+++.++++++++..
T Consensus 199 ~~K~l~~P~--G~G~l~~~~~~~~~~~~ 224 (401)
T PLN02409 199 SQKALSLPT--GLGIVCASPKALEASKT 224 (401)
T ss_pred CccccCcCC--CcceeEECHHHHHHHhc
Confidence 999997654 26889999888877653
No 193
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.87 E-value=4.3e-20 Score=197.27 Aligned_cols=255 Identities=12% Similarity=0.108 Sum_probs=154.9
Q ss_pred CchhHHHHHHHHHHHh------CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcE---
Q 009172 208 GNPTTVVVEEKMSALE------GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--- 276 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~------g~-~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~--- 276 (541)
+.+...+||++||+++ +. .+.|++++|+ +++.++ ..++.+||+|++++|+|......+ +..|.+
T Consensus 74 ~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~~~----~~~g~~~~~ 148 (409)
T PRK07590 74 PEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVDTN----VMAGRTGEA 148 (409)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHH----HHcCCcccc
Confidence 4456678999999875 22 3456666665 888775 466789999999999999866443 334443
Q ss_pred --------EEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEEcCCCCCCccc---
Q 009172 277 --------ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQK--- 342 (541)
Q Consensus 277 --------v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di---~~Ia~la~~~gillvvDea~a~~~~~~--- 342 (541)
+..++.+.-+.+...+..+++|+|++++|+||||.+++. ++|+++|+++|++||+||+|.......
T Consensus 149 ~~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~ 228 (409)
T PRK07590 149 NEDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLP 228 (409)
T ss_pred cccccccceeEeecccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCC
Confidence 555543211112211222358999999999999999984 477788899999999999987533211
Q ss_pred -cc-cc----CCcEEEECCccccCCCCCceEEEEEeChHHHHHH------------HHHhhhcCCCccHHHHHHHHHhH-
Q 009172 343 -AL-SL----GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI------------RNLHHVLGGALNPNAAYLIIRGM- 403 (541)
Q Consensus 343 -~l-~~----gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l------------~~~~~~~g~~~s~~~a~l~l~~l- 403 (541)
++ .. ...|++.|+||.++.+| ...||+++++++++.+ ...........+.....++...+
T Consensus 229 ~~~~~~~~~~~~vi~~~SfSK~~~~pG-lRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~ 307 (409)
T PRK07590 229 HSIYEIEGARECAIEFRSFSKTAGFTG-TRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYS 307 (409)
T ss_pred cchhhCCCcccceEEEecCccccCCcC-ceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhc
Confidence 11 11 13478899999997555 4579999998888632 11111111223433333332222
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHc-CC
Q 009172 404 ----KTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDAL-KI 478 (541)
Q Consensus 404 ----~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L-~~ 478 (541)
+.+....+...++++.+.+.|+.+. +. +..| ..|.++|+++++.. ....|...+ +.
T Consensus 308 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~-~~~~----------------~g~~f~wi~~~~~~-~~~~~~~~l~~~ 368 (409)
T PRK07590 308 PEGKAQIKELIDYYMENAKIIREGLESAG-FE-VYGG----------------VNAPYIWVKTPDGM-SSWDFFDKLLQE 368 (409)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc-eecC----------------CcceEEEEECCCCC-CHHHHHHHHHHH
Confidence 2333334455567777888888752 21 2111 14668899997531 223444433 23
Q ss_pred CceeecCCC
Q 009172 479 PYIAPSFGG 487 (541)
Q Consensus 479 ~~iavS~G~ 487 (541)
.++.+..|.
T Consensus 369 ~gv~v~pg~ 377 (409)
T PRK07590 369 ANVVGTPGS 377 (409)
T ss_pred CCEEEeChh
Confidence 455555554
No 194
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.87 E-value=7e-20 Score=193.16 Aligned_cols=278 Identities=17% Similarity=0.130 Sum_probs=180.0
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHH
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~ 287 (541)
.++..+++|++||+++|++.+++++||+.|+..++..+.++||.|++....|.++...+.. +. +..+. +...|+++
T Consensus 54 ~~~~~~~~e~~la~~~~~~~~l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~-~~--~~~~~-~~~~d~~~ 129 (370)
T PRK05937 54 PSSLLDDLEHKIAHFHGAPEAFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSV-IS--GWHQS-FRHNDLDH 129 (370)
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHH-cC--CceEE-ecCCCHHH
Confidence 5678999999999999999999999999888776666667889999989999888766543 22 44444 46678999
Q ss_pred HHHhccC-----CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc-ccc----cccC---CcEEEEC
Q 009172 288 LEAALNN-----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKA----LSLG---ADLVLHS 354 (541)
Q Consensus 288 Le~ai~~-----~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~-~~~----l~~g---aDivv~S 354 (541)
+++.+++ .++++|++++++|++|.+.|+++|.++|+++|+++++|++++.+.. .+. ..++ .++++.|
T Consensus 130 l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~t 209 (370)
T PRK05937 130 LESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVT 209 (370)
T ss_pred HHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEe
Confidence 9998862 2367888999999999999999999999999999999999886532 211 1223 2367889
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Q 009172 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKR 432 (541)
Q Consensus 355 ~sK~lgg~g~v~gG~vv~~~~li~~l~~~~--~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~ 432 (541)
++|.+|+.| +|+ ++.++..+.+.... ..+....++.....+..+++.+....+...+..+.+.++|.+. +..
T Consensus 210 lsK~~g~~G---~~v-l~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~--l~~ 283 (370)
T PRK05937 210 YSKALGSMG---AAL-LSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQK--FSS 283 (370)
T ss_pred chhhhhcCc---eEE-EcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh--cCC
Confidence 999999865 444 45566555444221 1223334555544444555544322222222333344444331 100
Q ss_pred EeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcC
Q 009172 433 VHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYG 512 (541)
Q Consensus 433 V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~g 512 (541)
.. .+.+..|.+++. ....+.+.|...++.++. .+.|
T Consensus 284 -~~------------------~~~~~~i~~~~~--~~~~~~~~L~~~gi~v~~------~~~~----------------- 319 (370)
T PRK05937 284 -AA------------------PGCVQPIFLPGI--SEQELYSKLVETGIRVGV------VCFP----------------- 319 (370)
T ss_pred -CC------------------CCCEEEEEeCCh--hHHHHHHHHHHCCeeEEe------eCCC-----------------
Confidence 00 112334556532 234555566555654441 1112
Q ss_pred CCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 513 IMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 513 i~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
..+.||+|++..++++.++.+.++|.+
T Consensus 320 -~~~~iRis~~~~~t~edid~l~~~L~~ 346 (370)
T PRK05937 320 -TGPFLRVNLHAFNTEDEVDILVSVLAT 346 (370)
T ss_pred -CCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 135799999988877777777777653
No 195
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.87 E-value=6.6e-20 Score=192.75 Aligned_cols=258 Identities=17% Similarity=0.176 Sum_probs=174.8
Q ss_pred hhHHHHHHHHHHHhCCC---c-EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC---
Q 009172 210 PTTVVVEEKMSALEGAE---S-TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~---~-~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
...+++++.+++++|++ . .++++||++++..++.++..+||+|++..+.|.+.. +...++..|++++.++.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~~~~~g~~~~~i~~~~~ 114 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGAR--IAQIAEYLGIAHVVLDTGED 114 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHH--HHHHHHHcCCcEEEEECCCC
Confidence 36789999999999974 3 446778899999999999999999999887776543 23456677888887753
Q ss_pred --CCHHHHHHhccCC-CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEECCccc
Q 009172 283 --ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATKF 358 (541)
Q Consensus 283 --~dle~Le~ai~~~-~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~S~sK~ 358 (541)
.|+++++++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|+++..+. ..+...+++|+++.|++|+
T Consensus 115 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~ 194 (368)
T PRK13479 115 EPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKC 194 (368)
T ss_pred CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccc
Confidence 3689999988642 46789999999999999999999999999999999998765432 2344456899999999998
Q ss_pred cCCCCCceEEEEEeChHHHHHHHHHhhhc--------------C---CCccHHHHHHHHHhHHH------HHHHHHHHHH
Q 009172 359 IGGHNDVLAGSISGSGKLVTQIRNLHHVL--------------G---GALNPNAAYLIIRGMKT------LHLRVQQQNS 415 (541)
Q Consensus 359 lgg~g~v~gG~vv~~~~li~~l~~~~~~~--------------g---~~~s~~~a~l~l~~l~t------l~~r~~~~~~ 415 (541)
+.|+.+ .|+++.++++++.+......+ + .+.+....+.+..+++. ++.+.++..+
T Consensus 195 l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~ 272 (368)
T PRK13479 195 IEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYAN 272 (368)
T ss_pred cccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 755432 499999988877765321100 1 12222222222223322 3444566667
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCC
Q 009172 416 TALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 416 na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~-~~~~~~l~~L~~~~iavS~G 486 (541)
.++.+.+.|+++. +. +..+. .+ ..+.++.|.++... ....++.+.|...++.+..|
T Consensus 273 ~~~~l~~~L~~~g-~~-~~~~~-----~~--------~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g 329 (368)
T PRK13479 273 NQRTLVAGMRALG-FE-PLLDA-----EI--------QSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPG 329 (368)
T ss_pred HHHHHHHHHHHcC-Cc-ccCCc-----hh--------cCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecC
Confidence 7788888887752 22 11111 10 02345667665321 23456777776667766544
No 196
>PRK06855 aminotransferase; Validated
Probab=99.87 E-value=9.5e-20 Score=196.13 Aligned_cols=214 Identities=16% Similarity=0.170 Sum_probs=136.5
Q ss_pred hhHHHHHHHHHHHh----CC---CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 210 PTTVVVEEKMSALE----GA---ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g~---~~~i~~sSG-~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
....+||++||+++ |. .+.|++++| ++|+.+++. ++.+||.|++++|+|+.... .. ....|+.+..++
T Consensus 73 ~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~-~~--~~~~g~~~v~v~ 148 (433)
T PRK06855 73 KGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSS-AE--AAHAGYPPVTYR 148 (433)
T ss_pred CCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHH-HH--HHhcCCeEEEEe
Confidence 34567788888776 32 233545555 589988875 78999999999999987432 11 112355554442
Q ss_pred C-------CCHHHHHHhccC-CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc----cc-c
Q 009172 282 P-------ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----AL-S 345 (541)
Q Consensus 282 ~-------~dle~Le~ai~~-~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~----~l-~ 345 (541)
. .|+++|+++++. .+++++++++|+||||.+++ +++|+++|+++|++||+||+|....... ++ .
T Consensus 149 ~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~ 228 (433)
T PRK06855 149 LDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSE 228 (433)
T ss_pred cccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHH
Confidence 1 378999999863 25899999999999999998 4577788999999999999987543211 11 1
Q ss_pred ---cCCcEEEECCccccCCCCCceEEEEEeC-----hH---HHHHHHHHhhhcCCCccHHHHHHHHHhHH------HHHH
Q 009172 346 ---LGADLVLHSATKFIGGHNDVLAGSISGS-----GK---LVTQIRNLHHVLGGALNPNAAYLIIRGMK------TLHL 408 (541)
Q Consensus 346 ---~gaDivv~S~sK~lgg~g~v~gG~vv~~-----~~---li~~l~~~~~~~g~~~s~~~a~l~l~~l~------tl~~ 408 (541)
.+..|++.|+||.++.+| ...||++++ +. +++.+...... ....+.+..+++...++ .+..
T Consensus 229 ~~~~~~~I~~~S~SK~~~~pG-lRiG~ii~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Q~a~~~~l~~~~~~~~~~~ 306 (433)
T PRK06855 229 VIGDVPGIALKGISKELPWPG-SRCGWIEVYNADKDEVFKKYINSILNAKMI-EVCSTTLPQMAIPRIMSHPEYKNYLKE 306 (433)
T ss_pred HcCcCCeEEEecCccccCCCc-ceEEEEEEeCCchhhHHHHHHHHHHHhhcc-ccCCChHHHHHHHHhhcCCcHHHHHHH
Confidence 123489999999998666 357888862 22 22333222221 12234444444444442 2333
Q ss_pred HHHHHHHHHHHHHHHHHhCCC
Q 009172 409 RVQQQNSTALRMAEILEAHPK 429 (541)
Q Consensus 409 r~~~~~~na~~la~~L~~~p~ 429 (541)
..+...++.+.+.+.|++++.
T Consensus 307 ~~~~~~~r~~~~~~~L~~~~~ 327 (433)
T PRK06855 307 RNKRYEKRSNIAYEKLKDVPG 327 (433)
T ss_pred HHHHHHHHHHHHHHHHhcCCC
Confidence 334445666777788876544
No 197
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.87 E-value=1.4e-20 Score=192.58 Aligned_cols=222 Identities=18% Similarity=0.237 Sum_probs=160.6
Q ss_pred CCCCCCC-CCch-hHHHHHHHHHHHhCC----CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhccc
Q 009172 200 ASFEYGR-YGNP-TTVVVEEKMSALEGA----ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 200 ~~~~Y~R-~~~p-~~~~Le~~LA~l~g~----~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~ 272 (541)
..+.|+| |+.| .+..|++++++++|. ++.|++|+|. +++..++++++.+||+||+.+|.|..+.... ..
T Consensus 61 ~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~----~m 136 (420)
T KOG0257|consen 61 STNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQV----VM 136 (420)
T ss_pred hhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHH----hh
Confidence 4566777 4555 567888899998875 3556666665 9999999999999999999999998866433 33
Q ss_pred CCcEEEEeCC-------------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCC
Q 009172 273 MGITATVIDP-------------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 273 ~Gi~v~~vd~-------------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a 336 (541)
.|.+.+++.. .|.+.++.++++ +||+|++++||||||.+.+ +++|+++|++||+++|.||+|.
T Consensus 137 aG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe 215 (420)
T KOG0257|consen 137 AGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYE 215 (420)
T ss_pred cCCcceeeccccccccccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhH
Confidence 3555444432 389999999998 6999999999999999997 7799999999999999999975
Q ss_pred CCCcc---------cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcC-CCccHHHHHH--HH-Hh-
Q 009172 337 TPLNQ---------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG-GALNPNAAYL--II-RG- 402 (541)
Q Consensus 337 ~~~~~---------~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g-~~~s~~~a~l--~l-~~- 402 (541)
-.+.. .|-.+...+-+.|++|+++-.|. ..||+++++.++..++..+.... .+..+...+. +. .+
T Consensus 216 ~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGW-rlGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~ 294 (420)
T KOG0257|consen 216 WLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGW-RLGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALEL 294 (420)
T ss_pred HHhhCCCcceeeecCCchhheEEEeccccceeeeeee-eeeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhh
Confidence 33221 12233456899999999998774 47888888888877776554333 2222322111 11 11
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHhC
Q 009172 403 -------MKTLHLRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 403 -------l~tl~~r~~~~~~na~~la~~L~~~ 427 (541)
........+...++++.+++.|.+.
T Consensus 295 ~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 295 ACLQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred hccCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1233335666778899999999986
No 198
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.87 E-value=7.5e-20 Score=197.37 Aligned_cols=284 Identities=14% Similarity=0.171 Sum_probs=181.3
Q ss_pred hHHHHHHHHHHHhCC---------CcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 211 TTVVVEEKMSALEGA---------ESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~---------~~~i~~sSG-~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
....|++++|++++. .+.|++++| ++|+.+++.+++.|||.|+++.|.|++....+. .+.|++++.+
T Consensus 96 G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~---~~~g~~vv~v 172 (447)
T PLN02607 96 GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR---WRTGVKIVPI 172 (447)
T ss_pred chHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH---hcCCcEEEEE
Confidence 356788888887641 134555666 589999999999999999999999988653321 2357777766
Q ss_pred CC-------CCHHHHHHhccC-----CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc----
Q 009172 281 DP-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 281 d~-------~dle~Le~ai~~-----~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~---- 341 (541)
+. .|++++++++++ .++|+|++++|+||||.+++ +++|.++|+++|+++|+||+|+.....
T Consensus 173 ~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f 252 (447)
T PLN02607 173 HCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEF 252 (447)
T ss_pred eCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc
Confidence 43 368888888753 25899999999999999998 668888999999999999998753221
Q ss_pred -ccc----c------cCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH----
Q 009172 342 -KAL----S------LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT---- 405 (541)
Q Consensus 342 -~~l----~------~gaDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t---- 405 (541)
..+ . ...-+++.|+||.||..| ...|++++ ++++++.++.... ++. .+.....++...++.
T Consensus 253 ~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~G-lRvG~ivs~n~~l~~~~~~~~~-~~~-~s~~~q~~~~~~L~d~~~~ 329 (447)
T PLN02607 253 VSVAEIVEARGYKGVAERVHIVYSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSS-FTL-VSSQTQHLLASMLSDEEFT 329 (447)
T ss_pred ccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCc-ceEEEEEEcCHHHHHHHHHHhh-cCC-CCHHHHHHHHHHhCCchhH
Confidence 111 1 112378899999998666 45788887 6667666665432 222 233333333333321
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-----HHHHHHHHHc-
Q 009172 406 ---LHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-----TATIKFIDAL- 476 (541)
Q Consensus 406 ---l~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~-----~~~~~~l~~L- 476 (541)
+....++..++.+.+.+.|+++ ++. + .+ ...|.++|++++... +...++.+.+
T Consensus 330 ~~~l~~~r~~l~~~~~~~~~~L~~~-gi~-~-~~---------------~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll 391 (447)
T PLN02607 330 ENYIRTNRERLRKRYEMIVQGLRRA-GIE-C-LK---------------GNAGLFCWMNLSPLLETPTREGELALWDSIL 391 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCC-c-cc---------------CCeeEEEEEEchHhhcCCCchhHHHHHHHHH
Confidence 2223344456667777888765 221 1 11 125678899986311 2223444444
Q ss_pred CCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCC---HHHHHHHHHHHHh
Q 009172 477 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED---FEDLKADVLQALH 539 (541)
Q Consensus 477 ~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed---~edli~dL~~AL~ 539 (541)
+..++.+..|..+. ...++++||+++..+ .++.++.|.++|+
T Consensus 392 ~~~gV~v~pG~~f~---------------------~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~ 436 (447)
T PLN02607 392 REVKLNISPGSSCH---------------------CSEPGWFRVCFANMSEDTLEVALKRIHRFMD 436 (447)
T ss_pred HhCCEEEcCccccC---------------------CCCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 33567777664321 013689999999633 3445555555554
No 199
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.87 E-value=1.3e-19 Score=193.70 Aligned_cols=280 Identities=15% Similarity=0.145 Sum_probs=200.1
Q ss_pred hhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc--------------cCCCEEEEcCCCCcchHHHHHhhcccC-C
Q 009172 210 PTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------------PAGGHIVTTTDCYRKTRIFIETVLPKM-G 274 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all--------------~~GD~VIv~~~~y~~~~~~~~~~l~~~-G 274 (541)
..+++||++||+++|.+++++++||..|+..++.++. ..+|.|++....|.+....++ +.+.. +
T Consensus 147 ~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~-ls~~~~~ 225 (476)
T PLN02955 147 TYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR-LAERQGN 225 (476)
T ss_pred HHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHH-hccccCC
Confidence 4678899999999999999999999999988888762 456788988889988776553 23323 5
Q ss_pred cEEEEeCCCCHHHHHHhccCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCccc---------c
Q 009172 275 ITATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK---------A 343 (541)
Q Consensus 275 i~v~~vd~~dle~Le~ai~~~--~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~---------~ 343 (541)
.++..++.+|+++|++.++.. +.++|++|...++.|.+.|+++|.++|++||++||+||+++.+.... .
T Consensus 226 a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g 305 (476)
T PLN02955 226 VEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFN 305 (476)
T ss_pred ceEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhC
Confidence 788888999999999888532 35799999999999999999999999999999999999987654321 1
Q ss_pred cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHH
Q 009172 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTAL 418 (541)
Q Consensus 344 l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~--~~g~~~s~~~a~l~l~~l~tl---~~r~~~~~~na~ 418 (541)
.....|+++.|++|.+|.. ||++++++++++.++.... .+++.++|..+..++..++.+ ..+.++..+|.+
T Consensus 306 ~~~di~ii~~TLsKA~G~~----GGfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~ 381 (476)
T PLN02955 306 CEADVDLCVGTLSKAAGCH----GGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVK 381 (476)
T ss_pred CCCCCcEEEEeCccchhcc----CceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 1224689999999999865 5899999988888876433 344555555555555555443 234444445554
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCccc
Q 009172 419 RMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 419 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
++.+. . +++. ...++.+.+. +...+..+.+.|...|+-++. +..|+.
T Consensus 382 ~fr~~----~--------G~~~-------------~sPI~pI~ig-~~~~a~~~~~~L~~~Gi~v~~------i~yPtV- 428 (476)
T PLN02955 382 EFKAL----S--------GVDI-------------SSPIISLVVG-NQEKALKASRYLLKSGFHVMA------IRPPTV- 428 (476)
T ss_pred HHHHh----c--------CCCC-------------CCCEEEEEeC-CHHHHHHHHHHHHHCCCEEEE------ECCCCC-
Confidence 44431 1 1110 1458888884 556677777777766665553 223331
Q ss_pred ccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
| .....+||++...++++.|+.|.++|..
T Consensus 429 -----P--------~g~~rLRi~lsA~Ht~edId~lv~~L~~ 457 (476)
T PLN02955 429 -----P--------PNSCRLRVTLSAAHTTEDVKKLITALSS 457 (476)
T ss_pred -----C--------CCCceEEEeeCCCCCHHHHHHHHHHHHH
Confidence 1 1245799999988877777777777753
No 200
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.87 E-value=9.3e-20 Score=194.27 Aligned_cols=279 Identities=14% Similarity=0.130 Sum_probs=168.5
Q ss_pred CchhHHHHHHHHHHHh---CC-CcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCc-------
Q 009172 208 GNPTTVVVEEKMSALE---GA-ESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI------- 275 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~---g~-~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi------- 275 (541)
+.+....|++++|+++ +. .+.|++++|+ +++..+ ..++.+||+|++++|+|...... ++..|+
T Consensus 73 p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~~~~ 147 (402)
T TIGR03542 73 PEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL-QSLFGSDNTVAVQDPVYPAYVDS----NVMAGRAGVLDDD 147 (402)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH-HHhcCCCCEEEEeCCCCcchHHH----HHHcCCccccccc
Confidence 4456788999999875 33 3456666665 788764 56678999999999999986543 334455
Q ss_pred ----EEEEeCCCCHHHHHHhc-cCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc----c
Q 009172 276 ----TATVIDPADMEGLEAAL-NNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK----A 343 (541)
Q Consensus 276 ----~v~~vd~~dle~Le~ai-~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~----~ 343 (541)
++..++.+..+.+...+ ...++++|++++|+||||.+++ +++|+++|+++|++||+||+|....... +
T Consensus 148 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~ 227 (402)
T TIGR03542 148 GRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHS 227 (402)
T ss_pred cccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcc
Confidence 76666542111111111 1125899999999999999998 6788888999999999999987543211 1
Q ss_pred c---c--cCCcEEEECCccccCCCCCceEEEEEeChHHH--------HHHHHHhhhcCCCccHHHHHHHHHhH-----HH
Q 009172 344 L---S--LGADLVLHSATKFIGGHNDVLAGSISGSGKLV--------TQIRNLHHVLGGALNPNAAYLIIRGM-----KT 405 (541)
Q Consensus 344 l---~--~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li--------~~l~~~~~~~g~~~s~~~a~l~l~~l-----~t 405 (541)
. . ....+++.|+||.+|.+| +..|+++++++++ +.+...........+.....++...+ +.
T Consensus 228 ~~~~~~~~~~vi~~~SfSK~~g~pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 306 (402)
T TIGR03542 228 IFEIPGAKECAIEFRSFSKTAGFTG-VRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQP 306 (402)
T ss_pred hhhCCCCcccEEEEecCccccCCCC-cceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhH
Confidence 1 1 123477899999998666 4578999988776 22211111112223433333322222 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcC-CCceeec
Q 009172 406 LHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALK-IPYIAPS 484 (541)
Q Consensus 406 l~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~-~~~iavS 484 (541)
+....+...++.+.+.+.|+++. +. + +++ ..|+++|++++... ...++.+.+. ..++.+.
T Consensus 307 ~~~~~~~~~~~~~~~~~~L~~~~-~~-~-~~~---------------~~~~f~~v~l~~~~-~~~~l~~~l~~~~gv~v~ 367 (402)
T TIGR03542 307 ILEAISYYMENARILRKALEAAG-FK-V-YGG---------------EHAPYLWVKTPEGI-SSWDFFDFLLYQYHVVGT 367 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-ce-e-cCC---------------CceeEEEEECCCCC-CHHHHHHHHHHhCCEEEe
Confidence 32333445566777778887752 21 1 111 14678999997521 2234444432 3466666
Q ss_pred CCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHH
Q 009172 485 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKAD 533 (541)
Q Consensus 485 ~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~d 533 (541)
.|..+.. ...++|||+++. +.+++.+.
T Consensus 368 pg~~f~~---------------------~~~~~iRis~~~-~~~~l~~~ 394 (402)
T TIGR03542 368 PGSGFGP---------------------SGEGFVRFSAFG-KRENIVEA 394 (402)
T ss_pred CchhhCC---------------------CCCCEEEEEecC-CHHHHHHH
Confidence 5543210 125799999865 44443333
No 201
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.87 E-value=1.5e-19 Score=190.02 Aligned_cols=279 Identities=14% Similarity=0.068 Sum_probs=187.9
Q ss_pred chhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc------cCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 209 NPTTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALV------PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~all------~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
.+..+++++.||+++|.+ ..+++++|++++..++.++. ++||+|++++++|.+.. ..++..|++++.+
T Consensus 58 ~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~----~~~~~~G~~~~~v 133 (373)
T TIGR03812 58 KKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFE----KAAEMLGLELRYA 133 (373)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHH----HHHHHcCCeEEEE
Confidence 345688999999999985 45778888888887776553 46799999999997743 3445668888877
Q ss_pred CC-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc-----------cccc
Q 009172 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----------QKAL 344 (541)
Q Consensus 281 d~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~-----------~~~l 344 (541)
+. .|+++++++++++ +..+++.+|+||+|.+.|+++|.++|+++|+++|+|++|+.+.. .+..
T Consensus 134 ~~~~~~~~d~~~l~~~l~~~-~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~ 212 (373)
T TIGR03812 134 PLDEDYTVDVKDVEDLIDDN-TIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFS 212 (373)
T ss_pred eeCCCCCcCHHHHHHHHhhC-cEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcccc
Confidence 64 3799999999774 54444445899999999999999999999999999999864321 1111
Q ss_pred ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhc-C-------CCccHHHHHHHHHhHHH-----HHHHHH
Q 009172 345 SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL-G-------GALNPNAAYLIIRGMKT-----LHLRVQ 411 (541)
Q Consensus 345 ~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~-g-------~~~s~~~a~l~l~~l~t-----l~~r~~ 411 (541)
..|+|.+..|.+|+..++. ..||+++.++++++.++...... + ++.+......+...++. ++.+.+
T Consensus 213 ~~~~d~~~~s~~K~~~~~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~ 291 (373)
T TIGR03812 213 LPGVQSITIDPHKMGLSPI-PAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVA 291 (373)
T ss_pred CCCCCEEEECccccCCCcC-CceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHH
Confidence 2378999999999754332 13567777888877664211111 1 12222222222333332 344567
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccc
Q 009172 412 QQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 412 ~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
+..++++++.+.|++.+. ..+ ++. ..+++.|.+++. . .+.+.|...++.++.+.
T Consensus 292 ~~~~~~~~l~~~L~~~g~-~~~-~~~----------------~~~~v~~~~~~~-~---~v~~~L~~~gi~v~~~~---- 345 (373)
T TIGR03812 292 ECMENTRYLVEELKKIGF-EPV-IEP----------------VLNIVAFEVDDP-E---EVRKKLRDRGWYVSVTR---- 345 (373)
T ss_pred HHHHHHHHHHHHHHhCCC-eEE-cCC----------------CceEEEEEeCCH-H---HHHHHHHHCCceeccCC----
Confidence 777888888888887642 222 221 246788888642 2 44555544454443210
Q ss_pred eecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
.++.||+|++..++++.++.+.++|++|
T Consensus 346 ----------------------~~~~iRis~~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 346 ----------------------CPKALRIVVMPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred ----------------------CCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence 2468999999888888889998888765
No 202
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.87 E-value=1.6e-19 Score=191.65 Aligned_cols=286 Identities=16% Similarity=0.116 Sum_probs=187.7
Q ss_pred hhHHHHHHHHHHHhCCC--cEEEeCCHHH-HHHHHHHHhccC--CCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC-
Q 009172 210 PTTVVVEEKMSALEGAE--STVIMASGMS-ASTVMLLALVPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA- 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~--~~i~~sSG~~-Ai~~al~all~~--GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~- 283 (541)
+..+++++++++++|.+ ..+++++|++ ++..++..++.+ ||+|+++++.|+.+...+....+..|.++++++..
T Consensus 64 ~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~ 143 (398)
T cd00613 64 QALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE 143 (398)
T ss_pred HHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC
Confidence 45678899999999975 6667776764 444455555666 99999999999998776655445567888877642
Q ss_pred ----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCH-HHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEEEECCcc
Q 009172 284 ----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDV-KLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATK 357 (541)
Q Consensus 284 ----dle~Le~ai~~~~tklV~lesp~NPtG~v~di-~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDivv~S~sK 357 (541)
|++++++++++ +|++|++++|+ ++|.+.|+ ++|.++|+++|+++|+|+++..+ ...++...++|+++.|+||
T Consensus 144 ~~~~d~~~l~~~i~~-~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K 221 (398)
T cd00613 144 GGTVDLEALKEEVSE-EVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQK 221 (398)
T ss_pred CCCcCHHHHHHhcCC-CeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccc
Confidence 68999999987 59999999985 89999985 99999999999999999987543 3345556789999999999
Q ss_pred ccCCC--CCceEEEEEeChHHHHHHHHH-------------------------hhhcCC--Cc--cHHH---HHHHHHhH
Q 009172 358 FIGGH--NDVLAGSISGSGKLVTQIRNL-------------------------HHVLGG--AL--NPNA---AYLIIRGM 403 (541)
Q Consensus 358 ~lgg~--g~v~gG~vv~~~~li~~l~~~-------------------------~~~~g~--~~--s~~~---a~l~l~~l 403 (541)
++.+. |...+|+++.++++++.+... +...+. .. .+.. ++..+..+
T Consensus 222 ~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~ 301 (398)
T cd00613 222 TGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYL 301 (398)
T ss_pred cCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHh
Confidence 98432 123478999888777654110 000010 01 1111 22111111
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCc
Q 009172 404 --KTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPY 480 (541)
Q Consensus 404 --~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-~~~~~~~l~~L~~~~ 480 (541)
+.++...++..+++.++.+.|++.+... .+. . ...+.++|.++.. .....++.+.|...+
T Consensus 302 ~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~---~~~---~-----------~~~~~v~~~~~~~~~~~~~~~~~~L~~~g 364 (398)
T cd00613 302 GPEGLKEIAERAHLNANYLAKRLKEVGGVL---PFN---G-----------PFFHEFVLRLPPLYGIRAEDLAKALIDGG 364 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---cCC---C-----------CeeEEEEEEcCCcchHHHHHHHHhhhhcC
Confidence 2233345566677788888887765431 111 0 1224567777631 134566776665444
Q ss_pred eeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 481 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 481 iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
+.+.. ..| ...+.||+|+...++++.++.+.++|
T Consensus 365 i~~~~-------~~~-----------------~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 365 FHAPT-------MYL-----------------PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred ccccc-------ccc-----------------CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 32110 000 12478999999999998888877654
No 203
>PRK08354 putative aminotransferase; Provisional
Probab=99.87 E-value=7.8e-20 Score=188.26 Aligned_cols=160 Identities=19% Similarity=0.241 Sum_probs=119.9
Q ss_pred hHHHHHHHHHHHhCCCcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHH
Q 009172 211 TTVVVEEKMSALEGAESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLE 289 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~~~i~~sSG-~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le 289 (541)
....|++++++++|. + |++++| ++++..++. ++.+||+|++++|+|..... .++..|.++..++ .|++.++
T Consensus 41 ~~~~l~~~ia~~~~~-~-I~vt~G~~~al~~~~~-~~~~gd~vlv~~P~y~~~~~----~~~~~g~~~~~~~-~d~~~l~ 112 (311)
T PRK08354 41 YYEWLEEEFSKLFGE-P-IVITAGITEALYLIGI-LALRDRKVIIPRHTYGEYER----VARFFAARIIKGP-NDPEKLE 112 (311)
T ss_pred ChHHHHHHHHHHHCC-C-EEECCCHHHHHHHHHH-hhCCCCeEEEeCCCcHHHHH----HHHHcCCEEeecC-CCHHHHH
Confidence 357899999999984 4 555555 589887775 44589999999999988653 4455688887654 5788998
Q ss_pred HhccCCCeeEEEEeCCCCCCCcccCH---HHHHHHHHhCCCEEEEEcCCCCCCcc-cccccCCcEEEECCccccCCCCCc
Q 009172 290 AALNNNNVSLFFTESPTNPFLRCVDV---KLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSATKFIGGHNDV 365 (541)
Q Consensus 290 ~ai~~~~tklV~lesp~NPtG~v~di---~~Ia~la~~~gillvvDea~a~~~~~-~~l~~gaDivv~S~sK~lgg~g~v 365 (541)
+++++ ++++++++|+||||.+++. ++|.++|+++|+++|+||+|...... ........+++.|+||.++-+| .
T Consensus 113 ~~~~~--~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~G-l 189 (311)
T PRK08354 113 ELVER--NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPG-I 189 (311)
T ss_pred HhhcC--CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCcc-c
Confidence 88763 6789999999999999985 56677788899999999998765432 1122345689999999998665 3
Q ss_pred eEEEEEeChHHHHHHHHHh
Q 009172 366 LAGSISGSGKLVTQIRNLH 384 (541)
Q Consensus 366 ~gG~vv~~~~li~~l~~~~ 384 (541)
..|++++ +.+.++...
T Consensus 190 RiG~~v~---~~~~l~~~~ 205 (311)
T PRK08354 190 RVGYVKG---FEEAFRSVR 205 (311)
T ss_pred eeeeeee---hHHHHHHcC
Confidence 5688887 455555544
No 204
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.87 E-value=9.4e-20 Score=193.87 Aligned_cols=255 Identities=21% Similarity=0.186 Sum_probs=165.0
Q ss_pred CchhHHHHH----HHHHHHhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHh-hcccCCcEEEEe-
Q 009172 208 GNPTTVVVE----EKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVI- 280 (541)
Q Consensus 208 ~~p~~~~Le----~~LA~l~g~~~~-i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~-~l~~~Gi~v~~v- 280 (541)
+.+....++ +.+++++|.+.. ++++||++|+.+++.+++++||+|++++++|++....... .+...|.++..+
T Consensus 59 ~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 138 (402)
T cd00378 59 GCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVP 138 (402)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEec
Confidence 344444444 457788998654 5667899999999999999999999999999875432111 144456554443
Q ss_pred -CC------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc-----ccccccCC
Q 009172 281 -DP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGA 348 (541)
Q Consensus 281 -d~------~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~-----~~~l~~ga 348 (541)
+. .|++++++++.+.++++|++++|+|| ...|+++|.++|+++|+++|+|+++..+.. ..++. ++
T Consensus 139 ~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~ 215 (402)
T cd00378 139 YGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GA 215 (402)
T ss_pred CCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CC
Confidence 22 27999999986446899999888765 567999999999999999999999643221 22334 68
Q ss_pred cEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhh-cCCCccHHHHHH----HHHhHH-HHHHHHHHHHHHHHHHH
Q 009172 349 DLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-LGGALNPNAAYL----IIRGMK-TLHLRVQQQNSTALRMA 421 (541)
Q Consensus 349 Divv~S~sK~lgg~g~v~gG~vv~~~-~li~~l~~~~~~-~g~~~s~~~a~l----~l~~l~-tl~~r~~~~~~na~~la 421 (541)
|+++.|+||+++|+. +|++++++ +++++++..... ..+......... +...++ ....+.++..+++..+.
T Consensus 216 dv~~~s~sK~l~G~~---gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 292 (402)
T cd00378 216 DVVTTTTHKTLRGPR---GGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALA 292 (402)
T ss_pred cEEEeccccCCCCCC---ceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 999999999996553 67777776 888887654321 111111111111 111222 34456677788899999
Q ss_pred HHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC
Q 009172 422 EILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 485 (541)
Q Consensus 422 ~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~ 485 (541)
+.|.++ ++..+..| ..++++++.+++.......+.+.|+..++.+..
T Consensus 293 ~~L~~~-g~~~~~~~----------------~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~ 339 (402)
T cd00378 293 EALKER-GFKVVSGG----------------TDNHLVLVDLRPKGITGKAAEDALEEAGITVNK 339 (402)
T ss_pred HHHHhC-CCeEeecC----------------CCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcC
Confidence 999876 33222111 135688898863111123344444444555543
No 205
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.86 E-value=1.1e-19 Score=190.72 Aligned_cols=276 Identities=14% Similarity=0.071 Sum_probs=183.3
Q ss_pred hHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhcc----CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC--
Q 009172 211 TTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVP----AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-- 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~all~----~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~-- 282 (541)
..++++++|++++|.+ ..+++++|++++..++.++.. +||+|+++++.|.+.. ..++..|++++.++.
T Consensus 60 ~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~~~ 135 (371)
T PRK13520 60 LEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFD----KAADMLGVELRRAPLDD 135 (371)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHH----HHHHHcCceEEEecCCC
Confidence 3478999999999974 457778888999888876643 5799999999987643 344556888887763
Q ss_pred ---CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc---c-----cccccCCcEE
Q 009172 283 ---ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN---Q-----KALSLGADLV 351 (541)
Q Consensus 283 ---~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~---~-----~~l~~gaDiv 351 (541)
.|+++|+++++++ +++|++.+++|++|.+.|+++|.++|+++|+++++|++|+.+.. . +....++|.+
T Consensus 136 ~~~~d~~~l~~~i~~~-~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~ 214 (371)
T PRK13520 136 DYRVDVKAVEDLIDDN-TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSI 214 (371)
T ss_pred CCcCCHHHHHHHHhhC-CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceE
Confidence 3799999999874 77777778899999999999999999999999999999875321 1 1113478999
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhc--------CCCccHHHHHHHHHhHHH-----HHHHHHHHHHHHH
Q 009172 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL--------GGALNPNAAYLIIRGMKT-----LHLRVQQQNSTAL 418 (541)
Q Consensus 352 v~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~--------g~~~s~~~a~l~l~~l~t-----l~~r~~~~~~na~ 418 (541)
..|.+|+..++. ..|++++.++++++.+....... +++.++..+..+...++. +..+.++..++++
T Consensus 215 ~~s~~K~~~a~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~ 293 (371)
T PRK13520 215 TIDPHKMGLAPI-PAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTR 293 (371)
T ss_pred EECCccccCccC-CceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHH
Confidence 999999865433 13556666776776654211111 111222222222333332 3445667778888
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCccc
Q 009172 419 RMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 419 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
++.+.|++. ++..+..| ..+++.|.++. ..++.+.|...++.++.+.
T Consensus 294 ~l~~~L~~~-g~~~~~~~-----------------~~~~v~~~~~~----~~~v~~~L~~~gi~v~~~~----------- 340 (371)
T PRK13520 294 WLAEELKER-GFEPVIEP-----------------VLNIVAFDDPN----PDEVREKLRERGWRVSVTR----------- 340 (371)
T ss_pred HHHHHHHhC-CCEEecCC-----------------CceEEEEecCC----HHHHHHHHHHCCceeccCC-----------
Confidence 888888765 44322211 24588888763 2344444443355444311
Q ss_pred ccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
..+.||+|++..++++.++.+.++|++
T Consensus 341 ---------------~~~~iRis~~~~~t~edi~~~~~~l~~ 367 (371)
T PRK13520 341 ---------------CPEALRIVCMPHVTREHIENFLEDLKE 367 (371)
T ss_pred ---------------CCCEEEEEEECCCCHHHHHHHHHHHHH
Confidence 135799999877666666766666653
No 206
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.86 E-value=3.9e-20 Score=180.89 Aligned_cols=312 Identities=18% Similarity=0.233 Sum_probs=222.1
Q ss_pred cccCccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc-CCCEEEEcC
Q 009172 178 VNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTTT 256 (541)
Q Consensus 178 ~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~-~GD~VIv~~ 256 (541)
++|.|+..|+.+......+...+.-.|+ -+|+..+||+.+|+++|.|..+|++||+.++.++++..+. +|.+||+.+
T Consensus 26 LRSDTvT~PTdeMr~am~eA~vgDdVyG--eD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd 103 (384)
T KOG1368|consen 26 LRSDTVTVPTDEMRRAMAEASVGDDVYG--EDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGD 103 (384)
T ss_pred cccccccCChHHHHHHHhhcccCccccc--CCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEEecc
Confidence 6778888787766655666666667787 4789999999999999999999999999999999987764 899999999
Q ss_pred CCCcchHHHHHhhcccCCcEEEEeCC-----CCHHHHHHhccCC-------CeeEEEEeCCCCCCC-cccCHH---HHHH
Q 009172 257 DCYRKTRIFIETVLPKMGITATVIDP-----ADMEGLEAALNNN-------NVSLFFTESPTNPFL-RCVDVK---LVSD 320 (541)
Q Consensus 257 ~~y~~~~~~~~~~l~~~Gi~v~~vd~-----~dle~Le~ai~~~-------~tklV~lesp~NPtG-~v~di~---~Ia~ 320 (541)
..|--.++.- .+....|+.++.+.. .+++++|+++..+ .|++|.+|+-+|.+| .++|++ +|.+
T Consensus 104 ~~HI~~~E~g-g~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~ 182 (384)
T KOG1368|consen 104 RAHIHRYEQG-GISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKA 182 (384)
T ss_pred chheeehhcc-ChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHH
Confidence 8875443221 112223666666542 3799999999732 489999999988776 999976 6778
Q ss_pred HHHhCCCEEEEEcC--C----CCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCcc--
Q 009172 321 LCHKKGAIVCIDGT--F----ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN-- 392 (541)
Q Consensus 321 la~~~gillvvDea--~----a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s-- 392 (541)
+|+++|+.|++|.+ | +.+++.+-.-.-+|-|.-.+||.+|.+ +|.+++++++++++.+.++..+|+.+-
T Consensus 183 lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQs 259 (384)
T KOG1368|consen 183 LAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQS 259 (384)
T ss_pred HHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHH
Confidence 89999999999998 2 233433333334677777899999977 578999999999999888887776653
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHH
Q 009172 393 PNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKF 472 (541)
Q Consensus 393 ~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~ 472 (541)
...+.+++-.+......++.-.+.+..++++++..+.+ ++..|..+ .+|+.+.|....-.++.|
T Consensus 260 GvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i-~v~v~a~e---------------tNiv~~~l~q~~~~~~~l 323 (384)
T KOG1368|consen 260 GVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEI-RVEVPAVE---------------TNIVNMVLCQARLTAEEL 323 (384)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhccccce-eeecchhh---------------cceeeeecccccCCHHHH
Confidence 34455555566554445667778899999999976655 35555432 467877776433455666
Q ss_pred HHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 473 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 473 l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
.+.++..++..-.| ....+|+.+...=+++-++.+..+|
T Consensus 324 ~~~~~k~gi~lm~~---------------------------~s~r~Rivlh~Qvt~~~ve~~~~~~ 362 (384)
T KOG1368|consen 324 CKFLEKNGILLMGG---------------------------ASRRIRIVLHHQVTDEDVEYVKSVL 362 (384)
T ss_pred HHHHHHCCeEEeec---------------------------cccceEEEEEEecCHHHHHHHHHHH
Confidence 77666545432211 1235899988754455555555555
No 207
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.86 E-value=1.9e-19 Score=192.52 Aligned_cols=254 Identities=20% Similarity=0.167 Sum_probs=168.0
Q ss_pred chhHHHHHH----HHHHHhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHh-hcccCCcEEEEeCC
Q 009172 209 NPTTVVVEE----KMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIET-VLPKMGITATVIDP 282 (541)
Q Consensus 209 ~p~~~~Le~----~LA~l~g~~~~-i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~-~l~~~Gi~v~~vd~ 282 (541)
++..+.+++ .+++++|.+.. ++++||++|+..++.+++++||+|+++.++|++....... .+...|.++..++.
T Consensus 66 ~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (416)
T PRK00011 66 CEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGV 145 (416)
T ss_pred chHHHHHHHHHHHHHHHHhCCCceeeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCc
Confidence 345555655 89999998755 6678999999999999999999999999999864321111 12334566666542
Q ss_pred ------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc-----ccccccCCcEE
Q 009172 283 ------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-----QKALSLGADLV 351 (541)
Q Consensus 283 ------~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~-----~~~l~~gaDiv 351 (541)
.|+++++++++++++++|+++.++ +|...|+++|.++|+++|+++|+|+++..+.. ..+.. ++|++
T Consensus 146 ~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~--~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~ 222 (416)
T PRK00011 146 DEETGLIDYDEVEKLALEHKPKLIIAGASA--YSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVV 222 (416)
T ss_pred CcccCCcCHHHHHHHHHhcCCCEEEECCCc--CCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEE
Confidence 378999999975458999986554 45678999999999999999999999754321 12334 78999
Q ss_pred EECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhc--CCCccHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHHHH
Q 009172 352 LHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL--GGALNPNAAYLIIRGMK----TLHLRVQQQNSTALRMAEIL 424 (541)
Q Consensus 352 v~S~sK~lgg~g~v~gG~vv~~-~~li~~l~~~~~~~--g~~~s~~~a~l~l~~l~----tl~~r~~~~~~na~~la~~L 424 (541)
+.|+||+++|+. ||+++++ ++++++++...... +.......+.+....++ .+..+.+++.++++.+.+.|
T Consensus 223 ~~S~~K~l~g~~---gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L 299 (416)
T PRK00011 223 TTTTHKTLRGPR---GGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEAL 299 (416)
T ss_pred EecCCcCCCCCC---ceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 999999986543 6888885 68888877654321 11112222221111112 34567788889999999999
Q ss_pred HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecC
Q 009172 425 EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSF 485 (541)
Q Consensus 425 ~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~ 485 (541)
++. ++. +. +. . ..++++++.+++.......+.+.|+..|+.++.
T Consensus 300 ~~~-g~~-~~-~~--~------------~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~ 343 (416)
T PRK00011 300 AER-GFR-VV-SG--G------------TDNHLVLVDLRSKGLTGKEAEAALEEANITVNK 343 (416)
T ss_pred HhC-CCe-ee-ec--C------------CCCeEEEEeCcccCCCHHHHHHHHHHcCcEEcc
Confidence 875 332 21 11 0 123678888853211233455555555666653
No 208
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.86 E-value=2.7e-19 Score=191.03 Aligned_cols=282 Identities=14% Similarity=0.115 Sum_probs=178.3
Q ss_pred hHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhccCCC---EEEEcCCCCcchHHHHHhhcccCCcEE----EEeC
Q 009172 211 TTVVVEEKMSALEGAE--STVIMASGMSASTVMLLALVPAGG---HIVTTTDCYRKTRIFIETVLPKMGITA----TVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~all~~GD---~VIv~~~~y~~~~~~~~~~l~~~Gi~v----~~vd 281 (541)
..+++++ + +++|++ +.++++|++++++.++.+++++|+ +|+++..+|++....+...+++.|+++ ..++
T Consensus 72 ~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~ 149 (406)
T TIGR01814 72 LDESLLK-L-RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIE 149 (406)
T ss_pred hhhhhcc-c-cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEec
Confidence 3344444 5 788874 466666677999999998876653 688888999987665554556667776 3443
Q ss_pred C-----CCHHHHHHhcc--CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEE
Q 009172 282 P-----ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLH 353 (541)
Q Consensus 282 ~-----~dle~Le~ai~--~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~ 353 (541)
. .++++++++++ ..+|++|++++++|.+|.++|+++|.++||++|+++++|++++.+. +.+..++|+|+++.
T Consensus 150 ~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~ 229 (406)
T TIGR01814 150 PREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACW 229 (406)
T ss_pred cCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEE
Confidence 2 26788887774 1259999999999999999999999999999999999999988764 45555789999999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHhhh-----------------------cCCCccHHHHHHHHHhHHHH----
Q 009172 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-----------------------LGGALNPNAAYLIIRGMKTL---- 406 (541)
Q Consensus 354 S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~-----------------------~g~~~s~~~a~l~l~~l~tl---- 406 (541)
|++|+++++.+ +|+++.++.+ ..+...... ..++.+....+.+..+++.+
T Consensus 230 s~hK~l~g~pG--~~l~v~~~~~-~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g 306 (406)
T TIGR01814 230 CTYKYLNAGPG--AGAFVHEKHA-HTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAG 306 (406)
T ss_pred cCccccCCCCC--eEEEEehhhh-hhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcC
Confidence 99999864321 4544444332 222110000 01233333333333444443
Q ss_pred -HHHHHHHHHHHHHHHHHHHhCC----CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCce
Q 009172 407 -HLRVQQQNSTALRMAEILEAHP----KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI 481 (541)
Q Consensus 407 -~~r~~~~~~na~~la~~L~~~p----~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~i 481 (541)
+...++..+..+++.+.|++.+ .+. +..|. .+ ...+++++|.++.+ ...+.+.|...++
T Consensus 307 ~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~-i~~~~---~~---------~~r~~~v~~~~~~~---~~~~~~~L~~~gi 370 (406)
T TIGR01814 307 MEALRKKSLLLTDYLEELIKARCGGPPVLT-IITPR---DH---------AQRGCQLSLTHPVP---GKAVFQALIKRGV 370 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCceE-EeCCC---Ch---------hhcCCeEEEEecCC---HHHHHHHHHHCCE
Confidence 2223344455566666665532 232 22221 11 11367889988722 2344444444454
Q ss_pred eecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEe-cCCCHHHHHHHHHHHHhh
Q 009172 482 APSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF-GVEDFEDLKADVLQALHA 540 (541)
Q Consensus 482 avS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv-G~Ed~edli~dL~~AL~~ 540 (541)
.+.. ..++.||+|+ +..++++.++.+.++|++
T Consensus 371 ~v~~---------------------------~~~~~iRiS~~~~~nt~~did~l~~~l~~ 403 (406)
T TIGR01814 371 IGDK---------------------------REPSVIRVAPVPLYNTFVDVYDAVNVLEE 403 (406)
T ss_pred EEec---------------------------cCCCeEEEechhccCCHHHHHHHHHHHHH
Confidence 3321 0236899999 588888888888888764
No 209
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.86 E-value=5.5e-20 Score=191.19 Aligned_cols=267 Identities=15% Similarity=0.103 Sum_probs=178.6
Q ss_pred chhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhcc------------CC--CEEEEcCCCCcchHHHHHhhc
Q 009172 209 NPTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALVP------------AG--GHIVTTTDCYRKTRIFIETVL 270 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~----~~i~~sSG~~Ai~~al~all~------------~G--D~VIv~~~~y~~~~~~~~~~l 270 (541)
....+++.+.+++++|.+ +.+++++|++|+.+++.++.. +| +.|+++++.|.+....+
T Consensus 37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~---- 112 (345)
T cd06450 37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAA---- 112 (345)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHH----
Confidence 344455556667777864 678888889999998887642 33 47888888998755433
Q ss_pred ccCCcEEEEeCC-----CCHHHHHHhccCC-----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc
Q 009172 271 PKMGITATVIDP-----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN 340 (541)
Q Consensus 271 ~~~Gi~v~~vd~-----~dle~Le~ai~~~-----~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~ 340 (541)
...|.+++.++. .|+++|++++++. ++++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.+..
T Consensus 113 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~ 192 (345)
T cd06450 113 AYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLL 192 (345)
T ss_pred HHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHh
Confidence 233666666652 3799999998751 378999999999999999999999999999999999999876542
Q ss_pred c-ccc------ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhH--HHHHHHHH
Q 009172 341 Q-KAL------SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGM--KTLHLRVQ 411 (541)
Q Consensus 341 ~-~~l------~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l--~tl~~r~~ 411 (541)
. ... ..++|.++.|+||+++++. ..|+++.+ ....+.+++.+ ..+..+.+
T Consensus 193 ~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~--g~g~~~~~-------------------~~~~~~~l~~l~~~g~~~~~~ 251 (345)
T cd06450 193 PFPEPRHLDFGIERVDSISVDPHKYGLVPL--GCSAVLVR-------------------ALKLWATLRRFGRDGYGEHID 251 (345)
T ss_pred hChhhHHHhcCccccCEEEEchhHhhCCCc--chHHHHHH-------------------HHHHHHHHHHHhHHHHHHHHH
Confidence 1 111 1268999999999887653 24554433 22222222222 33556667
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---HHHHHHHHHHcCCCceeecCCCc
Q 009172 412 QQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 412 ~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~---~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
+..+.++++.+.|.+.+.+.-+ .+. .++++.|.+++. ......+.+.|...++.+..+
T Consensus 252 ~~~~~~~~l~~~L~~~~~~~~~-~~~----------------~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~-- 312 (345)
T cd06450 252 RIVDLAKYLAELIRADPGFELL-GEP----------------NLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPA-- 312 (345)
T ss_pred HHHHHHHHHHHHHhcCCCeEEe-cCC----------------ceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEe--
Confidence 7778889999999888765322 211 246899988752 123445666665432211110
Q ss_pred ccceecCcccccccCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHhh
Q 009172 489 ESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE-DFEDLKADVLQALHA 540 (541)
Q Consensus 489 ~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E-d~edli~dL~~AL~~ 540 (541)
. . .+ .++.+|+|++.. ++++.++.|.++|++
T Consensus 313 -------~--~-----------~~-~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 313 -------T--T-----------LG-GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred -------e--E-----------EC-CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 0 0 00 246899999976 477778888888765
No 210
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.85 E-value=4.6e-19 Score=179.42 Aligned_cols=263 Identities=20% Similarity=0.216 Sum_probs=188.4
Q ss_pred cccCccccCChHHHHHHHhcc-cCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcC
Q 009172 178 VNTSAYFFKKTAELIDFKEKR-RASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTT 256 (541)
Q Consensus 178 ~~sst~~~~~~~~~~~~~~~~-~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~ 256 (541)
+.|.++.-+..+.++.....+ .+.-.|| .+|..+++|+++++++|.+.++|++|||+|+.++|.+.++||+.||+..
T Consensus 4 f~SDn~~g~~~~m~eam~~a~~~~~~~YG--~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~ 81 (342)
T COG2008 4 FRSDNVAGPTPEMREALAAANAVGDDVYG--EDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQPGESVICHE 81 (342)
T ss_pred cccCccCCCCHHHHHHHHhccccCCCCCC--CCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCCCCeEEEec
Confidence 456666666666655554443 3444566 5799999999999999999999999999999999999999999999998
Q ss_pred CCCcchHHHHHhhcccC--CcEEEEeCC----CCHHHHHHhccCC-----CeeEEEEeCCCCCCCcccCHH---HHHHHH
Q 009172 257 DCYRKTRIFIETVLPKM--GITATVIDP----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVK---LVSDLC 322 (541)
Q Consensus 257 ~~y~~~~~~~~~~l~~~--Gi~v~~vd~----~dle~Le~ai~~~-----~tklV~lesp~NPtG~v~di~---~Ia~la 322 (541)
..|-.+++.- ....+ +.++..++. .++++|++.+.++ .+.++++++..|..|++++++ +|.++|
T Consensus 82 ~aHi~~~E~G--a~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~ 159 (342)
T COG2008 82 TAHIYTDECG--APEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVC 159 (342)
T ss_pred cccceecccC--cHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHH
Confidence 8886544221 11111 234443432 3799999987632 367777778777889999855 777889
Q ss_pred HhCCCEEEEEcCC------CCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccH--H
Q 009172 323 HKKGAIVCIDGTF------ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP--N 394 (541)
Q Consensus 323 ~~~gillvvDea~------a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~--~ 394 (541)
|++|++|++|.+- +.+....-...++|++..++||.++.++ +.+++++.+++++++.++...|+.++. +
T Consensus 160 k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~ 236 (342)
T COG2008 160 KEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKARF 236 (342)
T ss_pred HHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhhH
Confidence 9999999999981 1122233445689999999999988764 567788999999999888888876653 2
Q ss_pred HHHHHHHhHHHHHHHHHHHHHH--HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009172 395 AAYLIIRGMKTLHLRVQQQNST--ALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 395 ~a~l~l~~l~tl~~r~~~~~~n--a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g 464 (541)
.+...+..|++-..+.....+| +.+|++.|...|+++ +..|. ..|++.+.++.
T Consensus 237 laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~-~~~~~----------------~tN~vf~~l~~ 291 (342)
T COG2008 237 LAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVK-LAFPV----------------ETNMVFVRLPE 291 (342)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCce-eccCC----------------cccEEEEECCh
Confidence 2333333444433445555566 899999998877764 33331 35789999874
No 211
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.85 E-value=3.5e-19 Score=189.49 Aligned_cols=288 Identities=14% Similarity=0.148 Sum_probs=190.0
Q ss_pred CCCCCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhh---------
Q 009172 203 EYGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETV--------- 269 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~---~~~i~~sSG~~Ai~~al~all~~G-D~VIv~~~~y~~~~~~~~~~--------- 269 (541)
...+|.++...+|+++|+++.+. +.+++++||++|+..+++....+| ++|+..++.|++........
T Consensus 78 ~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 157 (398)
T PRK03244 78 VSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAP 157 (398)
T ss_pred ccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccC
Confidence 34567888889999999999875 367788899999999998766666 57777777888753222111
Q ss_pred cccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCCC------
Q 009172 270 LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL------ 339 (541)
Q Consensus 270 l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~~------ 339 (541)
+...+.++..++..|++++++++++ ++++|++|+++||+|.+.| +++|.++|++||+++|+||++....
T Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~~~~-~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~ 236 (398)
T PRK03244 158 FEPLPGGVEHVPYGDVDALAAAVDD-DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF 236 (398)
T ss_pred CCCCCCCceEeCCCCHHHHHHhhcC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH
Confidence 1112234556666789999999865 5999999999999999987 8899999999999999999975321
Q ss_pred cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHHH
Q 009172 340 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTA 417 (541)
Q Consensus 340 ~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~--~r~~~~~~na 417 (541)
.........|++ +++|.++++ ...|++++++++++.+...........++..+..+...++.+. ...++..+..
T Consensus 237 ~~~~~~~~pDi~--t~sK~l~~G--~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~ 312 (398)
T PRK03244 237 AHQHDGVTPDVV--TLAKGLGGG--LPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLG 312 (398)
T ss_pred hhhhhCCCCCEE--EEchhhhCC--cccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 111122335765 578999853 3467888888887776542222222345666666666665443 2234444556
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcc
Q 009172 418 LRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 418 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~ 497 (541)
+++.+.|++.. +|.. ...++.|.+++++++. +....+.+.+...|+-++..
T Consensus 313 ~~l~~~L~~~~------~~~~----------~~v~g~g~~~~i~~~~--~~~~~~~~~l~~~Gv~~~~~----------- 363 (398)
T PRK03244 313 EQLRAGIEALG------HPLV----------DHVRGRGLLLGIVLTA--PVAKAVEAAAREAGFLVNAV----------- 363 (398)
T ss_pred HHHHHHHHhcC------CCce----------eeEeeccEEEEEEEec--cHHHHHHHHHHHCCeEEeec-----------
Confidence 66677776521 1110 0113468899999964 24556666665555433210
Q ss_pred cccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009172 498 MSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~~ 540 (541)
..+.|||++.. ++.+.+++.|++++..
T Consensus 364 ----------------~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 364 ----------------APDVIRLAPPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred ----------------CCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 13679999765 4556666666666543
No 212
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.85 E-value=5.4e-19 Score=203.27 Aligned_cols=325 Identities=15% Similarity=0.077 Sum_probs=205.9
Q ss_pred cccCCCCCCCCCchhHHHHHHHHHHHhCCC--c-EEEeC-CHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcc
Q 009172 197 KRRASFEYGRYGNPTTVVVEEKMSALEGAE--S-TVIMA-SGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLP 271 (541)
Q Consensus 197 ~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~--~-~i~~s-SG~~Ai~~al~al-l~~GD~VIv~~~~y~~~~~~~~~~l~ 271 (541)
+.++.|..++......++.|+++|+++|++ + .|+|+ +.++|+++++.++ +++||+||++...|.+...++ ..++
T Consensus 65 np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~-~~a~ 143 (805)
T PLN02724 65 NPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIR-EYAL 143 (805)
T ss_pred CCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHH-HHHH
Confidence 344445556666778899999999999973 3 35555 5569999998887 789999999999998877544 5566
Q ss_pred cCCcEEEEeCCC-------------C--HHHHHHhcc---------CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--
Q 009172 272 KMGITATVIDPA-------------D--MEGLEAALN---------NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK-- 325 (541)
Q Consensus 272 ~~Gi~v~~vd~~-------------d--le~Le~ai~---------~~~tklV~lesp~NPtG~v~di~~Ia~la~~~-- 325 (541)
+.|+++.+++.+ + .++|++.++ ..+|++|.+.+.+|.+|.++|++.|.++++..
T Consensus 144 ~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~ 223 (805)
T PLN02724 144 EKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHS 223 (805)
T ss_pred HcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhccc
Confidence 779998887643 1 144555431 12478999999999999999999775555432
Q ss_pred ------CCEEEEEcCCCCCC-cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhc-----------
Q 009172 326 ------GAIVCIDGTFATPL-NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVL----------- 387 (541)
Q Consensus 326 ------gillvvDea~a~~~-~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~----------- 387 (541)
++++++|.+++.+. +.+..++++|+++.|+||++|++.+ .|+++.++++.+.+.......
T Consensus 224 ~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G--~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~ 301 (805)
T PLN02724 224 NFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTG--LGALLVRRDAAKLLKKKYFGGGTVAASIADID 301 (805)
T ss_pred ccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCC--ceEEEEehhhhhhhcCCccCCCceEEEecccc
Confidence 36899999987653 4566678999999999999994432 588888887776655321111
Q ss_pred -------------CCCccHHHHHHHHHhHHHHHH-----HHHHHHHHHHHHHHHHHhCC------CceEEeCCCCCCCch
Q 009172 388 -------------GGALNPNAAYLIIRGMKTLHL-----RVQQQNSTALRMAEILEAHP------KVKRVHYPGLKSHPE 443 (541)
Q Consensus 388 -------------g~~~s~~~a~l~l~~l~tl~~-----r~~~~~~na~~la~~L~~~p------~v~~V~~Pgl~s~p~ 443 (541)
.++.+......+..+++.+.. ..++..+.++++.+.|.+.+ .| +++-+.-.. +.
T Consensus 302 ~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v-~iyg~~~~~-~~ 379 (805)
T PLN02724 302 FVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVC-VLYGNHTFK-LE 379 (805)
T ss_pred eeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEE-EEcCCCCCC-CC
Confidence 122222222233344444332 12333455666677777654 23 233231000 00
Q ss_pred hhhHhhhcCCcccEEEEEEcCC------HHHHHHHHHHcCCCceeecCCCcccceecCccc-ccccCCHHHHH-------
Q 009172 444 HHIATQQMTGFGGVVSFEVDGD------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIM-SYWDLSQSERL------- 509 (541)
Q Consensus 444 ~~l~~~~~~g~g~~vsf~l~g~------~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~-~~~~~~~~~~~------- 509 (541)
....+++|+|.+.+. ...+..+.+ ..+|.+..|..+ .|... .+..+..++..
T Consensus 380 -------~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~---~~gI~vR~G~~C----a~~~~~~~lg~~~~~l~~~~~~~~ 445 (805)
T PLN02724 380 -------FHIQGPIVTFNLKRADGSWVGHREVEKLAS---LSGIQLRTGCFC----NPGACAKYLGLSHKDLQANFEAGH 445 (805)
T ss_pred -------cccccCEEEEEEEcCCCCEeCHHHHHHHHH---hcCcEEeecccc----CchHHHHHcCCCHHHHHHHhhcCC
Confidence 012578999999752 223444433 457888888543 22211 11122221111
Q ss_pred --------hcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 510 --------KYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 510 --------~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
..+...|.||+|+|..++.+.++.|.++|++
T Consensus 446 ~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 446 VCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred ccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 0122358999999999999999999988874
No 213
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.84 E-value=7.7e-19 Score=188.90 Aligned_cols=209 Identities=19% Similarity=0.207 Sum_probs=163.8
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh---------ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEE
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---------VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al---------l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
.+...+||++||+++|.+.+++++||++|+.+++.++ +++||+||++.++|.++...+ ...|.++++
T Consensus 62 G~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v----~~~G~~pv~ 137 (438)
T PRK15407 62 GRFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPI----IQNGLVPVF 137 (438)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHH----HHcCCEEEE
Confidence 4678999999999999999999999999999988865 489999999999999876444 345778777
Q ss_pred eCC------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccc---cccCCcE
Q 009172 280 IDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA---LSLGADL 350 (541)
Q Consensus 280 vd~------~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~---l~~gaDi 350 (541)
+|. .|++++++++++ +|++|++++ ++|...|+++|.++|+++|++||+|++++.+...+. -..| |+
T Consensus 138 vdvd~~~~~id~~~le~~i~~-~tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~ 212 (438)
T PRK15407 138 VDVELPTYNIDASLLEAAVSP-KTKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG-DI 212 (438)
T ss_pred EecCCCcCCcCHHHHHHHcCc-CCeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC-ce
Confidence 764 278999999987 599999965 468888999999999999999999999876643332 2233 89
Q ss_pred EEECCc--cccCCCCCceEEEEEeCh-HHHHHHHHHhhh-------------------------------------cC--
Q 009172 351 VLHSAT--KFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-------------------------------------LG-- 388 (541)
Q Consensus 351 vv~S~s--K~lgg~g~v~gG~vv~~~-~li~~l~~~~~~-------------------------------------~g-- 388 (541)
.++|++ |.+..+. ||+++.++ ++.++++..+.. .|
T Consensus 213 ~~fSf~~~k~~~~ge---GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n 289 (438)
T PRK15407 213 ATLSFYPAHHITMGE---GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYN 289 (438)
T ss_pred EEEeCCCCCCccccC---ceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccc
Confidence 999985 6565432 68888765 454544432210 11
Q ss_pred CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 009172 389 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPK 429 (541)
Q Consensus 389 ~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~~p~ 429 (541)
..++.+.|.+++..|+.++.++++..++++++.+.|...+.
T Consensus 290 ~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~ 330 (438)
T PRK15407 290 LKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLED 330 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 24667888899999999999999999999999999987664
No 214
>PLN02231 alanine transaminase
Probab=99.84 E-value=2.2e-18 Score=189.52 Aligned_cols=216 Identities=16% Similarity=0.188 Sum_probs=142.9
Q ss_pred hhHHHHHHHHHHHh----CC---CcEEEeCCH-HHHHHHHHHHhcc-CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 210 PTTVVVEEKMSALE----GA---ESTVIMASG-MSASTVMLLALVP-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 210 p~~~~Le~~LA~l~----g~---~~~i~~sSG-~~Ai~~al~all~-~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
....+||+.||+++ |. .+.|++++| ++|+.+++..++. +||.|+++.|.|...... +...|.+++.+
T Consensus 168 ~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~----~~~~g~~~v~~ 243 (534)
T PLN02231 168 QGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSAS----IALHGGTLVPY 243 (534)
T ss_pred CCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHH----HHHcCCEEEEE
Confidence 34667888888776 32 234555555 5999999999984 899999999999886543 34456666665
Q ss_pred CC-------CCHHHHHHhccCC-----CeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc--c-
Q 009172 281 DP-------ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ--K- 342 (541)
Q Consensus 281 d~-------~dle~Le~ai~~~-----~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~--~- 342 (541)
+. .|+++|++++++. ++|+|++.+|+||||.+++ +++|+++|+++|++||+||+|...... .
T Consensus 244 ~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~ 323 (534)
T PLN02231 244 YLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKK 323 (534)
T ss_pred ecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC
Confidence 32 2789999888541 4899999999999999997 568888999999999999998764321 1
Q ss_pred --cc-c----cC------CcEEEECCccccCC-CCCceEEEEEe---ChHHHHHHHHHhhhcCCCccHHHHHHHHHhH--
Q 009172 343 --AL-S----LG------ADLVLHSATKFIGG-HNDVLAGSISG---SGKLVTQIRNLHHVLGGALNPNAAYLIIRGM-- 403 (541)
Q Consensus 343 --~l-~----~g------aDivv~S~sK~lgg-~g~v~gG~vv~---~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l-- 403 (541)
.+ . .| .-++++|+||.+.+ .| ..+||++. ++++++.+...... ..+.+.....++...+
T Consensus 324 ~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pG-lRiGy~~~~~~~~~l~~~l~k~~~~-~~~s~~~~Q~~~~~~l~~ 401 (534)
T PLN02231 324 FHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFTSDVREQIYKVASV-NLCSNISGQILASLVMSP 401 (534)
T ss_pred cccHHHHHhhhccccCCceEEEEeccCcccccCCc-cceEEEEEecCCHHHHHHHHHHHhh-hcCCChHHHHHHHHHhCC
Confidence 11 0 11 23778999997643 44 45788875 67888887765432 2222222222222122
Q ss_pred --------HH----HHHHHHHHHHHHHHHHHHHHhCCCce
Q 009172 404 --------KT----LHLRVQQQNSTALRMAEILEAHPKVK 431 (541)
Q Consensus 404 --------~t----l~~r~~~~~~na~~la~~L~~~p~v~ 431 (541)
+. .....+...++++.+.+.|++++++.
T Consensus 402 p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~ 441 (534)
T PLN02231 402 PKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVT 441 (534)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 11 11123455677788888888776553
No 215
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1e-18 Score=186.47 Aligned_cols=213 Identities=15% Similarity=0.134 Sum_probs=140.3
Q ss_pred hhHHHHHHHHHHHhCC-------CcEEE---eCCHHHHHHHHHH---HhccCCCEEEEcCCCCcchHHHHHhhcccCCcE
Q 009172 210 PTTVVVEEKMSALEGA-------ESTVI---MASGMSASTVMLL---ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~-------~~~i~---~sSG~~Ai~~al~---all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
....+||+++|+++.. .+.|+ +.+|++|+.+++. +++++||+|++++|+|+.... .++..|.+
T Consensus 72 ~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~----~~~~~G~~ 147 (404)
T PTZ00376 72 EGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN----IFKSAGLN 147 (404)
T ss_pred CCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHcCCc
Confidence 4567889999987521 12344 4455577766654 678999999999999998664 44556777
Q ss_pred EEEeCC---C----CHHHHHHhccC--CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc--
Q 009172 277 ATVIDP---A----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-- 342 (541)
Q Consensus 277 v~~vd~---~----dle~Le~ai~~--~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~-- 342 (541)
++.++. + |++.++++++. .+++++++++||||||.+++ +++|+++|++||+++|+|++|.......
T Consensus 148 ~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 227 (404)
T PTZ00376 148 VKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLD 227 (404)
T ss_pred eeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHH
Confidence 777754 2 68889888852 23678888999999999998 5577888999999999999987544321
Q ss_pred ----cc----cc-CCcEEEECCccccCCCCCceEEEE---EeChHHHHHHH----HHhhhcCCCccHHHHHHHHHhHHH-
Q 009172 343 ----AL----SL-GADLVLHSATKFIGGHNDVLAGSI---SGSGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMKT- 405 (541)
Q Consensus 343 ----~l----~~-gaDivv~S~sK~lgg~g~v~gG~v---v~~~~li~~l~----~~~~~~g~~~s~~~a~l~l~~l~t- 405 (541)
+. .. ..-+++.|+||.++..|. ..||+ ++++++++.+. ..........+...+.++...++.
T Consensus 228 ~~~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl-RvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 306 (404)
T PTZ00376 228 KDAYAIRLFAERGVEFLVAQSFSKNMGLYGE-RIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDP 306 (404)
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCCccccccc-ccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCH
Confidence 01 11 134899999999996664 46776 56777655443 222222233344444444433321
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHhC
Q 009172 406 ---------LHLRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 406 ---------l~~r~~~~~~na~~la~~L~~~ 427 (541)
+....++..++++.+.+.|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 337 (404)
T PTZ00376 307 ELRAEWLSELKEMSGRIQNMRQLLYDELKAL 337 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1222334556777777888765
No 216
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.84 E-value=1.2e-18 Score=185.41 Aligned_cols=253 Identities=17% Similarity=0.180 Sum_probs=168.0
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc---------CC-CEEEEcCCCCcchHHHHHhhcc-----
Q 009172 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AG-GHIVTTTDCYRKTRIFIETVLP----- 271 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~---------~G-D~VIv~~~~y~~~~~~~~~~l~----- 271 (541)
..++...+|+++|+++.+.+.+++++||++|+..++..... +| ++||+.+..|++.......+..
T Consensus 79 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~ 158 (396)
T PRK04073 79 FHSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYK 158 (396)
T ss_pred cCCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccc
Confidence 46678889999999999888899999999999998875421 34 7888888878774322111111
Q ss_pred -cCC---cEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCCCc---
Q 009172 272 -KMG---ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (541)
Q Consensus 272 -~~G---i~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~~~--- 340 (541)
.++ ..+..++..|++++++++++ ++++|++|+++||+|.+.| +++|.++|+++|+++|+||+|.....
T Consensus 159 ~~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~ 237 (396)
T PRK04073 159 RGFGPMLPGIKKIPYGDLEALKAAITP-NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGK 237 (396)
T ss_pred cCCCCCCCCceEeCCCCHHHHHHhccc-CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcH
Confidence 011 12345666789999999976 5999999999999999987 88999999999999999999764211
Q ss_pred ---ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHH
Q 009172 341 ---QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (541)
Q Consensus 341 ---~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~--~r~~~~~~ 415 (541)
........|+++ ++|.+++++. ..|++++++++++.+...........++..+..++..|+.+. ...++..+
T Consensus 238 ~~~~~~~~~~pdi~~--~sK~lg~gg~-~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~ 314 (396)
T PRK04073 238 LFACDWDNVTPDMYI--LGKALGGGVF-PISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLE 314 (396)
T ss_pred HHHhhhcCCCCCEEE--ecccccCCCC-cceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 112223457665 7899987643 467888999888877542221222346666666666666542 12244445
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCcee
Q 009172 416 TALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 482 (541)
Q Consensus 416 na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~ia 482 (541)
..+++.+.|++.. ++.+. ..++.|.++.++++. ....+.+.|...++.
T Consensus 315 ~~~~l~~~L~~l~------~~~i~----------~~~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~ 362 (396)
T PRK04073 315 LGEYFKEQLKEID------NPMIK----------EVRGRGLFIGVELNE---PARPYCEALKEEGLL 362 (396)
T ss_pred HHHHHHHHHHhhc------CCccc----------ceecceEEEEEEecc---hHHHHHHHHHHCCeE
Confidence 5666666666531 12111 113467889999863 234566665444443
No 217
>PLN02672 methionine S-methyltransferase
Probab=99.83 E-value=2e-18 Score=198.90 Aligned_cols=212 Identities=16% Similarity=0.109 Sum_probs=147.7
Q ss_pred hHHHHHHHHHHHhCCC----cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC--
Q 009172 211 TTVVVEEKMSALEGAE----STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-- 283 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~----~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-- 283 (541)
..+.+.+.+++.+|.+ +.|++++|+ +++..++.+++++||+|+++.|+|+.+... ++..|.++..++..
T Consensus 735 lr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~----a~~~Ga~vv~Vpl~~e 810 (1082)
T PLN02672 735 PRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSA----AKFLKANFRRIPTKSS 810 (1082)
T ss_pred HHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHH----HHHcCCEEEEEecccc
Confidence 3678899999888762 367777777 778888899999999999999999886543 44567777777532
Q ss_pred -----CHHHHHHhccCCCeeEEEEeCCC-CCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc-cc---------c
Q 009172 284 -----DMEGLEAALNNNNVSLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ-KA---------L 344 (541)
Q Consensus 284 -----dle~Le~ai~~~~tklV~lesp~-NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~-~~---------l 344 (541)
|.+++++++++.+.++|++++|+ ||||.+++ +++|+++|++||++||+||+|...... .. .
T Consensus 811 ~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l 890 (1082)
T PLN02672 811 DGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSIL 890 (1082)
T ss_pred cCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHH
Confidence 57889999865334689999998 99999997 557788899999999999998632211 00 0
Q ss_pred -cc------CCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCCC-ccHHHHHHHHHhH--------HHHH
Q 009172 345 -SL------GADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGA-LNPNAAYLIIRGM--------KTLH 407 (541)
Q Consensus 345 -~~------gaDivv~S~sK~lgg~g~v~gG~vv~~~-~li~~l~~~~~~~g~~-~s~~~a~l~l~~l--------~tl~ 407 (541)
.. ..-+++.|+||.++.+| ...||+++++ ++++.++......+.. .+...+..++..+ +.+.
T Consensus 891 ~~~~~~sks~nVIvL~SfSKkf~lpG-LRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~ 969 (1082)
T PLN02672 891 SRLKSSNPSFAVALLGGLSTELLSGG-HEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVA 969 (1082)
T ss_pred HHhccccCCceEEEEeCcHHhhccHH-HHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 01 13478899999998777 4578888864 5888887654332221 2222222222111 2233
Q ss_pred HHHHHHHHHHHHHHHHHHhC
Q 009172 408 LRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 408 ~r~~~~~~na~~la~~L~~~ 427 (541)
...+...++++.+.+.|+++
T Consensus 970 e~r~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 970 EQKKILKSRAERLKETLEAC 989 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHC
Confidence 33445667788888999876
No 218
>PLN02368 alanine transaminase
Probab=99.83 E-value=1.2e-18 Score=185.79 Aligned_cols=221 Identities=14% Similarity=0.173 Sum_probs=150.7
Q ss_pred CCCCch-hHHHHHHHHHHHh----CC---CcEEEeCCHH-HHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHhhcccCC
Q 009172 205 GRYGNP-TTVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 205 ~R~~~p-~~~~Le~~LA~l~----g~---~~~i~~sSG~-~Ai~~al~all-~~GD~VIv~~~~y~~~~~~~~~~l~~~G 274 (541)
.+|+.+ ...+||++||+++ |. .+.|++++|+ +++..++.+++ ++||+|++++|+|...... +...|
T Consensus 101 ~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~----~~~~g 176 (407)
T PLN02368 101 GAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSAT----ISLLG 176 (407)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHH----HHHcC
Confidence 344443 3457888888776 52 2455556655 89999999987 7999999999999986643 34456
Q ss_pred cEEEEeCC-------CCHHHHHHhccC-----CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCC
Q 009172 275 ITATVIDP-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 275 i~v~~vd~-------~dle~Le~ai~~-----~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~ 339 (541)
.++..++. .|++++++++++ .++|++++++|+||||.+++ +++|+++|++||++||+||+|....
T Consensus 177 ~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~ 256 (407)
T PLN02368 177 GTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNI 256 (407)
T ss_pred CEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 66666532 368999998863 14899999999999999998 5577788999999999999987643
Q ss_pred ccc-----c-c----c-------cCCcEEEECCcccc-CCCCCceEEEEE---eChHHHHHHHHHhhhcCCCccHHHHHH
Q 009172 340 NQK-----A-L----S-------LGADLVLHSATKFI-GGHNDVLAGSIS---GSGKLVTQIRNLHHVLGGALNPNAAYL 398 (541)
Q Consensus 340 ~~~-----~-l----~-------~gaDivv~S~sK~l-gg~g~v~gG~vv---~~~~li~~l~~~~~~~g~~~s~~~a~l 398 (541)
... + . . .+..|++.|+||.| +-.| ...||++ +++++++.+...... ....+....++
T Consensus 257 y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~G-lRiGy~i~~~~~~~li~~~~~~~~~-~~~~~~~~Q~a 334 (407)
T PLN02368 257 YQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECG-QRGGYFEMTNIPPKTVEEIYKVASI-ALSPNVSGQIF 334 (407)
T ss_pred cCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCc-cceEEEEEeCCCHHHHHHHHHHhcc-cCCCCcHHHHH
Confidence 211 1 0 1 12358899999998 4455 4578887 478888888776422 22334344443
Q ss_pred HHHhHH--------------HHHHHHHHHHHHHHHHHHHHHhCCCce
Q 009172 399 IIRGMK--------------TLHLRVQQQNSTALRMAEILEAHPKVK 431 (541)
Q Consensus 399 ~l~~l~--------------tl~~r~~~~~~na~~la~~L~~~p~v~ 431 (541)
+...++ .+....+...+++..+.+.|++.|++.
T Consensus 335 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~ 381 (407)
T PLN02368 335 MGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVV 381 (407)
T ss_pred HHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 333332 112233455567778888888876653
No 219
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.83 E-value=2.2e-18 Score=181.68 Aligned_cols=286 Identities=15% Similarity=0.133 Sum_probs=185.1
Q ss_pred CCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh---cc----CCCEEEEcCCCCcchHHHHHhhc------
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL---VP----AGGHIVTTTDCYRKTRIFIETVL------ 270 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al---l~----~GD~VIv~~~~y~~~~~~~~~~l------ 270 (541)
..+|.++...+|+++|++++|.+++++++||++|+.++++.+ .. +||+|++.++.|++........-
T Consensus 63 ~~~~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~ 142 (379)
T TIGR00707 63 SNLYYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQ 142 (379)
T ss_pred ccccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhh
Confidence 355678999999999999999998999999999999888754 22 37999999999987432221110
Q ss_pred ---ccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCccc-C---HHHHHHHHHhCCCEEEEEcCCCCCCcc-c
Q 009172 271 ---PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATPLNQ-K 342 (541)
Q Consensus 271 ---~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~-d---i~~Ia~la~~~gillvvDea~a~~~~~-~ 342 (541)
.....++.+++..|++++++.+++ ++++|++++++|++|... + +++|.++|+++|+++|+||+|...... .
T Consensus 143 ~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~ 221 (379)
T TIGR00707 143 KGFEPLVPGFSYAPYNDIESLKKAIDD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGK 221 (379)
T ss_pred ccCCCCCCCceeeCCCCHHHHHHHhhh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch
Confidence 011123344555689999999987 599999987777777643 3 789999999999999999998642111 1
Q ss_pred -----ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHH
Q 009172 343 -----ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNS 415 (541)
Q Consensus 343 -----~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~--~r~~~~~~ 415 (541)
......|++ +++|.++ .| ...|++++++++++.+...........++..+..+...++.+. ...++..+
T Consensus 222 ~~~~~~~~~~~d~~--t~sK~~~-~G-~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~ 297 (379)
T TIGR00707 222 FFAYEHYGIEPDII--TLAKGLG-GG-VPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKE 297 (379)
T ss_pred hhhHHhcCCCCCEE--EEccccc-CC-cccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 112234554 5899999 44 3578899998888887653222222345666666555555432 23445556
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecC
Q 009172 416 TALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 416 na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
+.+.+.+.|++... .. +.. ...+.|.+++++++.+ ...|.+.|...++.+..+
T Consensus 298 ~~~~~~~~l~~~~~--~~---~~~----------~~~~~g~~~~~~~~~~---~~~~~~~l~~~Gv~v~~~--------- 350 (379)
T TIGR00707 298 KGDYFKERLEELGK--NY---PNK----------EVRGKGLMLGIELEAP---CKDIVKKALEKGLLVNCA--------- 350 (379)
T ss_pred HHHHHHHHHHHHHh--hC---CCC----------ccccCceEEEEEecCc---HHHHHHHHHHCCcEEeeC---------
Confidence 66677777765311 11 110 0123577899998643 345666665555544321
Q ss_pred cccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
..+.|||++....+++.++.+.++|+
T Consensus 351 ------------------~~~~lRi~~~~~~t~~~i~~~~~~l~ 376 (379)
T TIGR00707 351 ------------------GPKVLRFLPPLIITKEEIDEAVSALE 376 (379)
T ss_pred ------------------CCCEEEEECCCcCCHHHHHHHHHHHH
Confidence 13689999876444444555555554
No 220
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.83 E-value=3.3e-18 Score=182.34 Aligned_cols=288 Identities=19% Similarity=0.166 Sum_probs=189.5
Q ss_pred CchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc---------cCC
Q 009172 208 GNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP---------KMG 274 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g--~~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~---------~~G 274 (541)
.++...+|++.|+++.| .+.+++++||++|+..++..+ ..++|+|++.++.|++.......... ...
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL 156 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 46788999999999998 578889999999999999876 36789999999999885433222111 112
Q ss_pred cEEEEeCCC-----------CHHHHHHhccC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCC
Q 009172 275 ITATVIDPA-----------DMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 275 i~v~~vd~~-----------dle~Le~ai~~--~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~ 337 (541)
.++..++.. |+++|++++++ +++++|+++..+|++|.+.+ +++|.++|++||+++|+||++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g 236 (413)
T cd00610 157 PGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTG 236 (413)
T ss_pred CCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 344555555 78899998875 35889999888888899887 99999999999999999999764
Q ss_pred CC-c-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHH--HHHhhhcCCCccHHHHHHHHHhHHHHH--
Q 009172 338 PL-N-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQI--RNLHHVLGGALNPNAAYLIIRGMKTLH-- 407 (541)
Q Consensus 338 ~~-~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l--~~~~~~~g~~~s~~~a~l~l~~l~tl~-- 407 (541)
.. . ........|++ |++|.+++ | ...|++++++++++.+ ...........++..+..+...++.+.
T Consensus 237 ~g~~g~~~~~~~~~~~~d~~--t~sK~l~~-g-~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~ 312 (413)
T cd00610 237 FGRTGKMFAFEHFGVEPDIV--TLGKGLGG-G-LPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEE 312 (413)
T ss_pred CCcCcchhhHhhcCCCCCeE--EEcccccC-c-cccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 21 1 11112234554 67899997 3 4567888898888876 222211222345555555555555443
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------HHHHHHHHHHcCCCc
Q 009172 408 LRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFIDALKIPY 480 (541)
Q Consensus 408 ~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-------~~~~~~~l~~L~~~~ 480 (541)
...++..++.+++.+.|++.... ++. . ....+.|.++++.+... ......+.+.|...+
T Consensus 313 ~~~~~~~~~~~~l~~~l~~~~~~----~~~-~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 378 (413)
T cd00610 313 GLLENAAELGEYLRERLRELAEK----HPL-V---------GDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERG 378 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhh----CCc-E---------EEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCC
Confidence 23455556666777766653210 010 0 00124678999998642 134566777666555
Q ss_pred eeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 481 IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 481 iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+.+..++ .+.+|+++....+++.++.+.++|++
T Consensus 379 v~v~~~~---------------------------~~~lR~~~~~~~t~~~i~~~~~~l~~ 411 (413)
T cd00610 379 LLLRPSG---------------------------GNVIRLLPPLIITEEEIDEGLDALDE 411 (413)
T ss_pred eEEeecC---------------------------CCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 5443321 35799999887666666666666653
No 221
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.83 E-value=6.3e-18 Score=182.79 Aligned_cols=212 Identities=23% Similarity=0.232 Sum_probs=151.2
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC-----
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----- 282 (541)
+++...+||+++++++|.+.++++++|++|+.++++++++||| |+++++.|..+...+ ...|.++++++.
T Consensus 76 ~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i----~~~G~~~v~v~~~~~~~ 150 (460)
T PRK13238 76 GSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHI----ELNGATAVDLVIDEALD 150 (460)
T ss_pred CCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHH----HHcCCEEEEEecccccc
Confidence 4567899999999999999999999999999999999999999 999998887765333 234666665532
Q ss_pred ----------CCHHHHHHhccC---CCeeEEEEeCCCCCCC-cccC---HHHHHHHHHhCCCEEEEEcCCCC--------
Q 009172 283 ----------ADMEGLEAALNN---NNVSLFFTESPTNPFL-RCVD---VKLVSDLCHKKGAIVCIDGTFAT-------- 337 (541)
Q Consensus 283 ----------~dle~Le~ai~~---~~tklV~lesp~NPtG-~v~d---i~~Ia~la~~~gillvvDea~a~-------- 337 (541)
.|+++|++++++ .+|++|++++|+||+| .+.+ +++|.++|++||++||+|+++..
T Consensus 151 ~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~ 230 (460)
T PRK13238 151 TGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQ 230 (460)
T ss_pred ccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhh
Confidence 478999999974 2599999999999997 7776 56999999999999999997521
Q ss_pred ---CCccccc-------ccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhc-C----CCccHHHHHHHHH
Q 009172 338 ---PLNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL-G----GALNPNAAYLIIR 401 (541)
Q Consensus 338 ---~~~~~~l-------~~gaDivv~S~sK~lgg~g~v~gG~vv~~-~~li~~l~~~~~~~-g----~~~s~~~a~l~l~ 401 (541)
++..... ....|+++.|++|.+.++ .||+++.+ ++++++++...... | +.++......+..
T Consensus 231 ~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~---~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~ 307 (460)
T PRK13238 231 REPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVN---IGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAV 307 (460)
T ss_pred ccccccCCCHHHHhhhhcccCcEEEEecccCCCCc---ceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHh
Confidence 1111111 124799999999976654 37888887 57888887653111 1 1223332333333
Q ss_pred hHHH--HHHHHHHHHHHHHHHHHHHHhC
Q 009172 402 GMKT--LHLRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 402 ~l~t--l~~r~~~~~~na~~la~~L~~~ 427 (541)
+++. -....+...++++.+.+.|.+.
T Consensus 308 ~l~e~~~~~~~~~~~~~~~~l~~~L~~~ 335 (460)
T PRK13238 308 GLYEGMDEDYLAYRIGQVEYLGEGLEEA 335 (460)
T ss_pred hHHHhhChHHHHHHHHHHHHHHHHHHHC
Confidence 4433 1223444455678888988874
No 222
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.82 E-value=4.5e-18 Score=183.79 Aligned_cols=284 Identities=19% Similarity=0.245 Sum_probs=185.5
Q ss_pred hHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC----
Q 009172 211 TTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~al-l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
...++++.+++++|.+ ..+++++|++++..++.++ ..+||+|+++++.|+.+...+.......|++++.++.+
T Consensus 113 ~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~ 192 (447)
T PRK00451 113 AIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVT 192 (447)
T ss_pred HHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCC
Confidence 3445567889999974 3456666778888888887 47999999999999988777665556678898888754
Q ss_pred CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE--EcCCCCCCcccccccCCcEEEECCccc---
Q 009172 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI--DGTFATPLNQKALSLGADLVLHSATKF--- 358 (541)
Q Consensus 284 dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvv--Dea~a~~~~~~~l~~gaDivv~S~sK~--- 358 (541)
|++++++++++ +|++|++++| |+||.+.|+++|.++||++|+++++ |... .+....+.++|+|+++.|.+|+
T Consensus 193 d~~~l~~~i~~-~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~-~g~~~~~~~~~~D~~~~s~~k~~~~ 269 (447)
T PRK00451 193 DLEALEAAVDD-DTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVS-LGLLKPPGEYGADIVVGEGQPLGIP 269 (447)
T ss_pred CHHHHHHhcCC-CeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHH-hccCCCcccCCCCEEEECCCcCCCC
Confidence 79999999987 4999999999 8999999999999999999999998 5442 2333345678999999987775
Q ss_pred --cCCCCCceEEEEEeChHHHHHHHH-------------------------HhhhcCC-C---ccH---HHHHHHHHhH-
Q 009172 359 --IGGHNDVLAGSISGSGKLVTQIRN-------------------------LHHVLGG-A---LNP---NAAYLIIRGM- 403 (541)
Q Consensus 359 --lgg~g~v~gG~vv~~~~li~~l~~-------------------------~~~~~g~-~---~s~---~~a~l~l~~l- 403 (541)
++|++ +|+++.++++++.+.. .+...+. . ..+ ..++..++.+
T Consensus 270 ~~~~Gpg---~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~ 346 (447)
T PRK00451 270 LSFGGPY---LGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLG 346 (447)
T ss_pred CCCCCCC---chHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHC
Confidence 55554 6888888877776310 0000010 0 011 1222111111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCcee
Q 009172 404 -KTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIA 482 (541)
Q Consensus 404 -~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~ia 482 (541)
+.++...++..++++++.+.|++.+.+. +. ++ + ...++.+.++.+ ..++.+.|...++.
T Consensus 347 ~~g~~~~~~~~~~~~~~l~~~L~~~~g~~-~~-~~----~-----------~~~~~~v~~~~~---~~~~~~~L~~~gi~ 406 (447)
T PRK00451 347 PEGLRELAEQNHQKAHYLAERLAEIGGVE-LF-DG----P-----------FFNEFVVRLPKP---AEEVNEALLEKGIL 406 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCEE-ec-CC----C-----------eEEEEEEecCCC---HHHHHHHHHhcCCC
Confidence 2345556677788888899998876553 21 11 0 112334554322 34555555544432
Q ss_pred ecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 483 PSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 483 vS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
..+- ..+ |. + +. .+.+|+|++..++++.++.|.++|++
T Consensus 407 ~~~~------~~~----~~--~-------~~-~~~~rvs~~~~~t~e~i~~l~~~L~~ 444 (447)
T PRK00451 407 GGYD------LGR----YY--P-------EL-GNHLLVCVTEKRTKEDIDALVAALGE 444 (447)
T ss_pred CCcc------ccc----cc--C-------Cc-CCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 2110 001 00 0 11 36899999977777777888877765
No 223
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=2.2e-18 Score=186.50 Aligned_cols=221 Identities=18% Similarity=0.126 Sum_probs=144.7
Q ss_pred CCCCCCCCchhHHH-HHHHHHHHhCCC-cEE-Ee---CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcc---
Q 009172 201 SFEYGRYGNPTTVV-VEEKMSALEGAE-STV-IM---ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLP--- 271 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~-Le~~LA~l~g~~-~~i-~~---sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~--- 271 (541)
.|..+.......++ .++++++++|++ +.+ +. +||++|+.+++.+++++||+|+++...|++....+....+
T Consensus 70 ~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~ 149 (452)
T PTZ00094 70 RYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKV 149 (452)
T ss_pred cccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCccccccccccccc
Confidence 34444333333442 467999999985 233 33 6899999999999999999999999999886543211110
Q ss_pred ---cCCcEEEEeCC-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc---
Q 009172 272 ---KMGITATVIDP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--- 340 (541)
Q Consensus 272 ---~~Gi~v~~vd~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~--- 340 (541)
..++++..++. .|+++|++++++.++++|++. ++.+|...|+++|.++||++|+++++|++++.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~ 227 (452)
T PTZ00094 150 SATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAG 227 (452)
T ss_pred ccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCC
Confidence 11233333332 389999999964347777763 34599999999999999999999999999876543
Q ss_pred --ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-----hhcCCCccHHHHHHHHHhHHHH-----HH
Q 009172 341 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGALNPNAAYLIIRGMKTL-----HL 408 (541)
Q Consensus 341 --~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~-----~~~g~~~s~~~a~l~l~~l~tl-----~~ 408 (541)
..+.. ++|+++.|+||+++|+. ||+++.++++.+.+.... ..+.+..++...+.+..+++.+ ..
T Consensus 228 ~~~~~~~-~~D~l~~S~hK~l~GP~---Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~ 303 (452)
T PTZ00094 228 VLPSPFP-YADVVTTTTHKSLRGPR---SGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKE 303 (452)
T ss_pred CCCCCCC-CCcEEEcCCccCCCCCC---ceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHH
Confidence 12333 79999999999997664 566666655544332211 1112233443333334444443 23
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 009172 409 RVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 409 r~~~~~~na~~la~~L~~~ 427 (541)
..++..++++++.+.|.+.
T Consensus 304 ~~~~i~~l~~~l~~~L~~~ 322 (452)
T PTZ00094 304 YAKQVLKNAKALAAALEKR 322 (452)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 4456667888888888764
No 224
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.82 E-value=3.6e-19 Score=181.96 Aligned_cols=166 Identities=19% Similarity=0.262 Sum_probs=131.5
Q ss_pred CCCCCCCchhHHHHHHHHHHHhCCCcEEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 202 FEYGRYGNPTTVVVEEKMSALEGAESTVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG-~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
..--.++.....++|+.+|+++|+++++++++| ++++.+++.+++++||+|++++++|.+....+ ...|++++++
T Consensus 51 ~d~l~~~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~----~~~g~~~~~v 126 (294)
T cd00615 51 LDDLLDPTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGL----VLSGAVPVYL 126 (294)
T ss_pred CCCCCCCChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHH----HHCCCEEEEe
Confidence 334445667789999999999999888875565 58999999999999999999999998876544 3357777666
Q ss_pred CC-----------CCHHHHHHhccC-CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC------ccc
Q 009172 281 DP-----------ADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL------NQK 342 (541)
Q Consensus 281 d~-----------~dle~Le~ai~~-~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~------~~~ 342 (541)
+. .|++++++++++ .++++|++++| |++|.+.|+++|.++|+++|+++++|++++..+ ...
T Consensus 127 ~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~ 205 (294)
T cd00615 127 KPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSS 205 (294)
T ss_pred cCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcc
Confidence 42 378999999864 25899999998 699999999999999999999999999987532 223
Q ss_pred ccccCCcEEEECCccccCCCCCceEEEEEeCh
Q 009172 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSG 374 (541)
Q Consensus 343 ~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~ 374 (541)
....|+|+++.|+||++++.. .+|++..++
T Consensus 206 ~~~~~~div~~S~hK~l~g~~--~~~~l~~~~ 235 (294)
T cd00615 206 AAMAGADIVVQSTHKTLPALT--QGSMIHVKG 235 (294)
T ss_pred hhhcCCcEEEEchhcccchHh--HHHHHHhCC
Confidence 345689999999999998653 345655544
No 225
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.82 E-value=3.6e-18 Score=181.18 Aligned_cols=287 Identities=16% Similarity=0.155 Sum_probs=184.7
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh----ccCCC----EEEEcCCCCcchHHHHHhhccc------
Q 009172 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL----VPAGG----HIVTTTDCYRKTRIFIETVLPK------ 272 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al----l~~GD----~VIv~~~~y~~~~~~~~~~l~~------ 272 (541)
+.++...+|+++|+++.+.+.+++++||++|+..+++.+ ..+|| +||+.++.|++........-..
T Consensus 70 ~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 149 (389)
T PRK01278 70 YRIPEQERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEG 149 (389)
T ss_pred cCChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhccc
Confidence 567888999999999987788999999999999998765 45676 8999999998864333111000
Q ss_pred C---CcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCccc----CHHHHHHHHHhCCCEEEEEcCCCCCCc-cc--
Q 009172 273 M---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV----DVKLVSDLCHKKGAIVCIDGTFATPLN-QK-- 342 (541)
Q Consensus 273 ~---Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~----di~~Ia~la~~~gillvvDea~a~~~~-~~-- 342 (541)
+ ...+..++..|++++++++++ ++++|++|.++|++|... .+++|.++|++||+++|+||++..... ..
T Consensus 150 ~~~~~~~~~~~~~~d~~~l~~~l~~-~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~ 228 (389)
T PRK01278 150 FGPLVPGFDQVPFGDIEALKAAITP-NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF 228 (389)
T ss_pred CCCCCCCceEeCCCCHHHHHHhhCC-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce
Confidence 0 011233455689999999987 599999999888888443 488999999999999999999763211 11
Q ss_pred ---ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHHHHH
Q 009172 343 ---ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTA 417 (541)
Q Consensus 343 ---~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~--r~~~~~~na 417 (541)
......|+ .+++|.++++ ...|++++++++++.+...........++..++.++..++.+.. ..++..++.
T Consensus 229 ~~~~~~~~pdi--~t~sK~l~~G--~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~ 304 (389)
T PRK01278 229 AHEWAGVTPDI--MAVAKGIGGG--FPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMG 304 (389)
T ss_pred eecccCCCCCE--EEEehhccCC--cceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 11222454 4689999843 45788888888877765433322334567777776666665422 234444555
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcc
Q 009172 418 LRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 418 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~ 497 (541)
+++.+.|+.... .+|.+ . ...++.|.++++++.. ...+|.+.|...++.+..|
T Consensus 305 ~~l~~~l~~l~~----~~~~~--------~-~~v~g~G~~~~i~~~~---~~~~~~~~l~~~GV~~~p~----------- 357 (389)
T PRK01278 305 LYLKQKLEGLVD----RFPDV--------I-EEVRGKGLLLGLKCVV---PNRDLVQALRDEGLLTVGA----------- 357 (389)
T ss_pred HHHHHHHHHHHh----hCCCc--------e-eeEecccEEEEEEEec---CHHHHHHHHHHCCeEEeec-----------
Confidence 556665554210 01110 0 0123467788888853 2345665554445433221
Q ss_pred cccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhhC
Q 009172 498 MSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHAI 541 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~~i 541 (541)
..+.|||++.. ++.++.++.|.++|+++
T Consensus 358 ----------------~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 358 ----------------GDNVVRLLPPLIITEEEIDEALERLERAAESL 389 (389)
T ss_pred ----------------CCCEEEEeCCcccCHHHHHHHHHHHHHHHHhC
Confidence 14689998653 35566667777776653
No 226
>PRK08637 hypothetical protein; Provisional
Probab=99.82 E-value=2.2e-17 Score=175.18 Aligned_cols=291 Identities=13% Similarity=0.133 Sum_probs=170.4
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHhC-----C--C--cEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhh
Q 009172 200 ASFEYGRYGNPTTVVVEEKMSALEG-----A--E--STVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV 269 (541)
Q Consensus 200 ~~~~Y~R~~~p~~~~Le~~LA~l~g-----~--~--~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~ 269 (541)
..+.|+. ......|++.++++.. . + +.|++++|+ +++.+++.+++++||+|++++|+|+.....+.
T Consensus 36 ~~~~Y~~--~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~-- 111 (388)
T PRK08637 36 EIFPYAP--PQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFN-- 111 (388)
T ss_pred cccCCCC--CCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH--
Confidence 3455653 2346678888876541 1 2 235566665 99999999999999999999999988653321
Q ss_pred cccCCcEEEEeCC------CCHHHHHHhcc---CCCeeEEEEeCCCCCCCcccCH---HHHHHHHHh-----CCCEEEEE
Q 009172 270 LPKMGITATVIDP------ADMEGLEAALN---NNNVSLFFTESPTNPFLRCVDV---KLVSDLCHK-----KGAIVCID 332 (541)
Q Consensus 270 l~~~Gi~v~~vd~------~dle~Le~ai~---~~~tklV~lesp~NPtG~v~di---~~Ia~la~~-----~gillvvD 332 (541)
...|.++..++. .|+++++++++ +.+++++++++|+||||.+++. ++|+++|++ ++++||+|
T Consensus 112 -~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~D 190 (388)
T PRK08637 112 -TRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVD 190 (388)
T ss_pred -HhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEec
Confidence 235777776643 26889988876 2245678888999999999984 466666654 89999999
Q ss_pred cCCCCCCccc----c-c----cc-CCc--EEEECCccccCCCCCceEEEEEe------ChHHHHHHHHHh----hhcCCC
Q 009172 333 GTFATPLNQK----A-L----SL-GAD--LVLHSATKFIGGHNDVLAGSISG------SGKLVTQIRNLH----HVLGGA 390 (541)
Q Consensus 333 ea~a~~~~~~----~-l----~~-gaD--ivv~S~sK~lgg~g~v~gG~vv~------~~~li~~l~~~~----~~~g~~ 390 (541)
|+|....... + . .. +.. +++.|+||.++.+|. ..||++. ++++++.+.... ......
T Consensus 191 e~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGl-RlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 269 (388)
T PRK08637 191 DAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGF-RVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISN 269 (388)
T ss_pred ccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCccc-ceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCC
Confidence 9986543211 1 1 11 111 234599998887764 5777764 357777665321 111122
Q ss_pred ccHHHHHHHHHhHHH--HHHHH----HHHHHHHHHHHHHHHhCCCce-EEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009172 391 LNPNAAYLIIRGMKT--LHLRV----QQQNSTALRMAEILEAHPKVK-RVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 391 ~s~~~a~l~l~~l~t--l~~r~----~~~~~na~~la~~L~~~p~v~-~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
.+.....++...++. +..++ ....++...+.+.|++++... ...+| ...|.++|+.++
T Consensus 270 ~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~---------------~~~g~~~~~~l~ 334 (388)
T PRK08637 270 GPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYP---------------FNSGYFMCLKLK 334 (388)
T ss_pred CCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccc---------------ccceEEEEecCC
Confidence 333443333333321 11111 123333444556665542100 00111 124567888886
Q ss_pred CCHHHHHHHHHHc-CCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCC---CHHHHHHHHHHHHh
Q 009172 464 GDLTATIKFIDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE---DFEDLKADVLQALH 539 (541)
Q Consensus 464 g~~~~~~~~l~~L-~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E---d~edli~dL~~AL~ 539 (541)
+ ....+|.+.+ +..++++.. ...+++||+++.. +.++.++.|.+++.
T Consensus 335 ~--~~~~~l~~~l~~~~gv~~~~---------------------------~~~~~iRi~~~~~~~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 335 G--VDAEELRVHLLEKYGIGTIA---------------------------LNETDLRIAFSCVEEEDIPELFDSIYKAIK 385 (388)
T ss_pred h--HHHHHHHHHHhhhcceEEEe---------------------------ccCCceEEEeecCCHHHHHHHHHHHHHHHH
Confidence 3 2456677666 344543320 0246899999864 44555666666665
Q ss_pred h
Q 009172 540 A 540 (541)
Q Consensus 540 ~ 540 (541)
+
T Consensus 386 ~ 386 (388)
T PRK08637 386 D 386 (388)
T ss_pred h
Confidence 4
No 227
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.82 E-value=8.9e-18 Score=178.68 Aligned_cols=285 Identities=19% Similarity=0.182 Sum_probs=182.4
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc----------cCCCEEEEcCCCCcchHHHHHhhcc------
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV----------PAGGHIVTTTDCYRKTRIFIETVLP------ 271 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all----------~~GD~VIv~~~~y~~~~~~~~~~l~------ 271 (541)
.++..+.+++.++++.+.+.+++++||++|+..++.... ..+++|++.+..|++.....-....
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~ 150 (400)
T PTZ00125 71 YNDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYN 150 (400)
T ss_pred cCHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhc
Confidence 467888999999999988889999999999999998653 1357888888888874322111110
Q ss_pred ---cCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCCC-c---
Q 009172 272 ---KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPL-N--- 340 (541)
Q Consensus 272 ---~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~~-~--- 340 (541)
.....+..++..|+++++++++.+++++|++|+++||+|.+.| +++|.++|++||+++|+||++.... .
T Consensus 151 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~ 230 (400)
T PTZ00125 151 NFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKL 230 (400)
T ss_pred cCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh
Confidence 0011234456678999999996336999999999999999998 9999999999999999999975321 1
Q ss_pred --ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHHHH
Q 009172 341 --QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNST 416 (541)
Q Consensus 341 --~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~--r~~~~~~n 416 (541)
........|+++ ++|.++++. ...|++++++++++.+...........++..+.++...++.+.. ..++..+.
T Consensus 231 ~~~~~~~~~pd~~~--~sK~l~~g~-~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~ 307 (400)
T PTZ00125 231 LAHDHEGVKPDIVL--LGKALSGGL-YPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRL 307 (400)
T ss_pred hHHHhcCCCCCEEE--EcccccCCC-cCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 111122357776 569998643 23678889998888775432211222356666666555655432 12233344
Q ss_pred HHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-CHHHHHHHHHHcCCCceeecCCCcccc
Q 009172 417 ALRMAEILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-DLTATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 417 a~~la~~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g-~~~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
.+.+.+.|++. +.+.. .++.|.+++++++. +......+.+.|...++.+..+
T Consensus 308 ~~~l~~~l~~l~~~~~~~~~------------------~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~----- 364 (400)
T PTZ00125 308 GEVFRDGLKELLKKSPWVKE------------------IRGKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKPT----- 364 (400)
T ss_pred HHHHHHHHHHHHhcCCCeEE------------------EecccEEEEEEEccCcchHHHHHHHHHHHCCeEEeec-----
Confidence 45555555442 21111 12357788998864 2234556666665445433211
Q ss_pred eecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009172 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~~ 540 (541)
..+.|||+... ++.++.++.|.++|.+
T Consensus 365 ----------------------~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 365 ----------------------HDNIIRFAPPLVITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred ----------------------CCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 24689999653 3455666666666553
No 228
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.82 E-value=4.4e-18 Score=185.42 Aligned_cols=161 Identities=18% Similarity=0.262 Sum_probs=115.1
Q ss_pred hHHHHHHHHHHHh------CC-----C-cEEEeCCHHHHHHHHHHH-----hccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009172 211 TTVVVEEKMSALE------GA-----E-STVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 211 ~~~~Le~~LA~l~------g~-----~-~~i~~sSG~~Ai~~al~a-----ll~~GD~VIv~~~~y~~~~~~~~~~l~~~ 273 (541)
...+|++++++.+ +. + +.+++++|++|+..++.+ +++|||+|++++|.|..+..... +...
T Consensus 135 g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~--l~g~ 212 (527)
T PRK09275 135 RMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPE--LPRY 212 (527)
T ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHH--HcCC
Confidence 4556777777622 11 2 344455556999988876 68999999999999988654331 2334
Q ss_pred CcEEEEeCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHh--CCCEEEEEcCCCCCCcc
Q 009172 274 GITATVIDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHK--KGAIVCIDGTFATPLNQ 341 (541)
Q Consensus 274 Gi~v~~vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~--~gillvvDea~a~~~~~ 341 (541)
++.++.++. .|++++++++++ ++|+|++++|+||||.+++ +++|+++|++ ++++||+||+|......
T Consensus 213 ~~~~v~v~~~~~~~f~~d~~~l~~~~~~-~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~ 291 (527)
T PRK09275 213 DLEVVHINADEENEWQYPDSELEKLRDP-SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD 291 (527)
T ss_pred CeEEEEeecCcccCCCCCHHHHHhhcCC-CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc
Confidence 565555532 267899998877 5999999999999999998 6677888854 59999999998764321
Q ss_pred --cccc--cCCcEEEECCccccCCCCCceEEEEEeChH
Q 009172 342 --KALS--LGADLVLHSATKFIGGHNDVLAGSISGSGK 375 (541)
Q Consensus 342 --~~l~--~gaDivv~S~sK~lgg~g~v~gG~vv~~~~ 375 (541)
.... ....|++.|+||+++..|. ..|+++++++
T Consensus 292 ~~s~~~~~~~~~I~v~SfSK~f~mtG~-RlG~i~~~~~ 328 (527)
T PRK09275 292 FRSLFAVLPYNTILVYSFSKYFGATGW-RLGVIALHED 328 (527)
T ss_pred ccCHHHhCCCCEEEEeehhhhccCcHh-HHhhhhcCch
Confidence 1111 1246899999999987764 4688888765
No 229
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.82 E-value=5.2e-18 Score=180.49 Aligned_cols=213 Identities=15% Similarity=0.120 Sum_probs=137.5
Q ss_pred hhHHHHHHHHHHHhCC-------CcEE--EeCCHH-HHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcccCCcEE
Q 009172 210 PTTVVVEEKMSALEGA-------ESTV--IMASGM-SASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~-------~~~i--~~sSG~-~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v 277 (541)
....+||+++++++.. .+.+ +.|+|+ +|+.++++.+ ++|||+|++++|+|...... ++..|+++
T Consensus 69 ~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~----~~~~g~~~ 144 (396)
T PRK09257 69 EGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAI----FEAAGLEV 144 (396)
T ss_pred CCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHH----HHHcCCcE
Confidence 4567888888887521 2233 556665 9999998655 58999999999999987643 44567777
Q ss_pred EEeCC-------CCHHHHHHhccC--CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcc----
Q 009172 278 TVIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQ---- 341 (541)
Q Consensus 278 ~~vd~-------~dle~Le~ai~~--~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~---- 341 (541)
+.++. .|+++++++++. .+++++++++|+||||.+++ +++|+++|++||+++|+|++|......
T Consensus 145 v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~ 224 (396)
T PRK09257 145 KTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEED 224 (396)
T ss_pred EEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHH
Confidence 66642 278889888752 23567777999999999998 557888899999999999998764321
Q ss_pred -ccc----cc-CCcEEEECCccccCCCCCceEEEEE--e-ChHHH----HHHHHHhhhcCCCccHHHHHHHHHhHH----
Q 009172 342 -KAL----SL-GADLVLHSATKFIGGHNDVLAGSIS--G-SGKLV----TQIRNLHHVLGGALNPNAAYLIIRGMK---- 404 (541)
Q Consensus 342 -~~l----~~-gaDivv~S~sK~lgg~g~v~gG~vv--~-~~~li----~~l~~~~~~~g~~~s~~~a~l~l~~l~---- 404 (541)
.++ .. ...+++.|+||.++.+|. ..||++ . +++.+ .+++..........+.....++...++
T Consensus 225 ~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 303 (396)
T PRK09257 225 AYGLRAFAAAGLELLVASSFSKNFGLYGE-RVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPEL 303 (396)
T ss_pred HHHHHHHHhcCCcEEEEEEcCCcCccccc-cceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHH
Confidence 111 11 235889999999997664 467776 2 44433 333333222222234443333333222
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHhC
Q 009172 405 ------TLHLRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 405 ------tl~~r~~~~~~na~~la~~L~~~ 427 (541)
.+....++..++++.+.+.|+++
T Consensus 304 ~~~~~~~~~~~r~~~~~rr~~l~~~L~~~ 332 (396)
T PRK09257 304 RAEWEAELEEMRERIKAMRQLLVEALKAK 332 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12223344456667777788765
No 230
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.81 E-value=1e-17 Score=177.71 Aligned_cols=288 Identities=17% Similarity=0.228 Sum_probs=184.7
Q ss_pred CCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCC-------CEEEEcCCCCcchHHHHHhhcc-----
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAG-------GHIVTTTDCYRKTRIFIETVLP----- 271 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~G-------D~VIv~~~~y~~~~~~~~~~l~----- 271 (541)
...|.++...+|+++|+++.|.+.+++++||++|+.++++.+...+ ++|++.++.|++........-.
T Consensus 75 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 154 (396)
T PRK02627 75 SNLYYIEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQ 154 (396)
T ss_pred ccccCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCcccc
Confidence 4456789999999999999988889999999999999998665433 6799999999875322211110
Q ss_pred ----cCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCC-cccC---HHHHHHHHHhCCCEEEEEcCCCCCCc-cc
Q 009172 272 ----KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFL-RCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-QK 342 (541)
Q Consensus 272 ----~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG-~v~d---i~~Ia~la~~~gillvvDea~a~~~~-~~ 342 (541)
.....+..++..|++++++++.+ ++++|++++++||+| .+.+ +++|.++|++||+++|+||+|..... ..
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~ 233 (396)
T PRK02627 155 EGFEPLVEGFIYVPFNDIEALKAAITD-KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK 233 (396)
T ss_pred ccCCCCCCCceEeCCCCHHHHHHhcCC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc
Confidence 00112334455689999999976 599999999999999 4444 78999999999999999999764211 11
Q ss_pred --c-cccC--CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHHH
Q 009172 343 --A-LSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNS 415 (541)
Q Consensus 343 --~-l~~g--aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~--r~~~~~~ 415 (541)
. ...+ .|++ +++|.+++ | ...|++++++++++.+...........++..+..+...++.+.. ..++..+
T Consensus 234 ~~~~~~~~~~pdi~--t~sK~~~~-G-~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~ 309 (396)
T PRK02627 234 LFAYQHYGIEPDIM--TLAKGLGG-G-VPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAE 309 (396)
T ss_pred eeeehhcCCCCCEE--EEcchhhC-C-cccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 1 1223 4554 58999994 3 45788888888887765432222233566677666666665432 2334444
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecC
Q 009172 416 TALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 416 na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
+...+.+.|.+... .+|.. ...++.|.+++++++. ...+|.+.+...|+.+..+
T Consensus 310 ~~~~~~~~l~~~~~----~~~~~----------~~~~~~g~~~~i~~~~---~~~~~~~~l~~~Gv~v~~~--------- 363 (396)
T PRK02627 310 VGEYLRAKLRELLE----KYPGI----------KEVRGLGLMIGIELDR---PAAEIVKKALEKGLLINVT--------- 363 (396)
T ss_pred HHHHHHHHHHHHHH----hCCCe----------eeeccCcEEEEEEecC---cHHHHHHHHHHCCeEEeec---------
Confidence 55555555543210 01111 0113467889999842 2455666654445444321
Q ss_pred cccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009172 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~~ 540 (541)
..+.||+++.+ ++.++.++.|.++|++
T Consensus 364 ------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 364 ------------------GDNVLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred ------------------CCCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 13579998653 3455666666666654
No 231
>PLN02397 aspartate transaminase
Probab=99.80 E-value=1.7e-17 Score=178.14 Aligned_cols=214 Identities=15% Similarity=0.162 Sum_probs=136.7
Q ss_pred chhHHHHHHHHHHHhCCC-------cE-----EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcE
Q 009172 209 NPTTVVVEEKMSALEGAE-------ST-----VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~-------~~-----i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
.....+||+++++++... +. ++.++|+.++...+..++.|||+|++++|.|+.+.. .++..|.+
T Consensus 90 ~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~----~~~~~g~~ 165 (423)
T PLN02397 90 IEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHN----IFRDAGVP 165 (423)
T ss_pred cCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHH----HHHHcCCe
Confidence 345678899999876321 22 223444445666666667799999999999988653 34455777
Q ss_pred EEEeCC-------CCHHHHHHhccC--CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc--
Q 009172 277 ATVIDP-------ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK-- 342 (541)
Q Consensus 277 v~~vd~-------~dle~Le~ai~~--~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~-- 342 (541)
+..++. .|++.+++.+.. .+++++++++||||||.+++ +++|+++|++||+++|+||+|.......
T Consensus 166 ~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~ 245 (423)
T PLN02397 166 VRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLD 245 (423)
T ss_pred EEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchh
Confidence 666532 367877776642 25889999999999999998 5577888899999999999987654311
Q ss_pred ----c---c-ccC-CcEEEECCccccCCCCCceEEEEE---eChHHHHHHH----HHhhhcCCCccHHHHHHHHHhHHH-
Q 009172 343 ----A---L-SLG-ADLVLHSATKFIGGHNDVLAGSIS---GSGKLVTQIR----NLHHVLGGALNPNAAYLIIRGMKT- 405 (541)
Q Consensus 343 ----~---l-~~g-aDivv~S~sK~lgg~g~v~gG~vv---~~~~li~~l~----~~~~~~g~~~s~~~a~l~l~~l~t- 405 (541)
+ . ..+ .-|++.|+||.++..|.+ .||++ +++++++.+. ..........+...+.++...++.
T Consensus 246 ~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~R-vG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~ 324 (423)
T PLN02397 246 ADAQSVRMFVEDGHEILVAQSYAKNMGLYGER-VGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDP 324 (423)
T ss_pred hhhHHHHHHHhcCCcEEEEEECcccCCCcccc-ceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCH
Confidence 1 1 112 248899999999966644 67763 3555554433 332222222333344443333321
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHhC
Q 009172 406 ---------LHLRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 406 ---------l~~r~~~~~~na~~la~~L~~~ 427 (541)
+....++..++++.+.+.|+++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 325 ELFSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2223345556777778888775
No 232
>PRK07505 hypothetical protein; Provisional
Probab=99.80 E-value=8.3e-17 Score=171.60 Aligned_cols=192 Identities=20% Similarity=0.194 Sum_probs=134.9
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc----cCCC-EEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV----PAGG-HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all----~~GD-~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
++.++..++++++|+++.|. +.++++||++|+..++..+. .+|+ .||+.+..|++.......... .+.++..+
T Consensus 87 ~~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~ 164 (402)
T PRK07505 87 RVRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETI 164 (402)
T ss_pred hhhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEe
Confidence 35677889999999999998 89999999999887775432 2233 355666566554322222222 35678888
Q ss_pred CCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC--------Ccccccc---cCCc
Q 009172 281 DPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--------LNQKALS---LGAD 349 (541)
Q Consensus 281 d~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~--------~~~~~l~---~gaD 349 (541)
+..|+++++++++++ ++++++++|+||+|.+.|+++|.++|+++|++||+||+++.. +...... ....
T Consensus 165 ~~~d~~~l~~~~~~~-~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~ 243 (402)
T PRK07505 165 DHNDLDALEDICKTN-KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERT 243 (402)
T ss_pred CCCCHHHHHHHHhcC-CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCe
Confidence 888999999998764 788999999999999999999999999999999999997421 1111111 1234
Q ss_pred EEEECCccccCCCCCceEEEEE-eChHHHHHHHHHhhh--cCCCccHHHHHHHHHhHH
Q 009172 350 LVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHV--LGGALNPNAAYLIIRGMK 404 (541)
Q Consensus 350 ivv~S~sK~lgg~g~v~gG~vv-~~~~li~~l~~~~~~--~g~~~s~~~a~l~l~~l~ 404 (541)
+++.|++|.+++.| |+++ .++++++.++..... +++.+++..+..+...++
T Consensus 244 i~~~s~sK~~~~~G----g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~ 297 (402)
T PRK07505 244 IIAASLGKAFGASG----GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAE 297 (402)
T ss_pred EEEEechhhhhccC----eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHH
Confidence 77889999998653 6665 477888877764332 334455555554444444
No 233
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.80 E-value=3.6e-17 Score=174.95 Aligned_cols=212 Identities=17% Similarity=0.192 Sum_probs=152.0
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC-----
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP----- 282 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~----- 282 (541)
+++...+||+++++++|.+.++++++|++|+.++++++++|||+| ++++.|..+...+ ...|.++++++.
T Consensus 51 ~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i----~~~Ga~pv~v~i~~~~~ 125 (431)
T cd00617 51 GSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHI----EANGAVPVDLVIDEAHD 125 (431)
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHH----HhCCCEeEEEecccccc
Confidence 456788999999999999999999999999999999999999987 5777887765433 233555554432
Q ss_pred ----------CCHHHHHHhccCC---CeeEEEEeCCCCCC-CcccC---HHHHHHHHHhCCCEEEEEcCCCC--------
Q 009172 283 ----------ADMEGLEAALNNN---NVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT-------- 337 (541)
Q Consensus 283 ----------~dle~Le~ai~~~---~tklV~lesp~NPt-G~v~d---i~~Ia~la~~~gillvvDea~a~-------- 337 (541)
.|+++|+++|+++ ++++|++++|+||+ |.+++ +++|.++|++||++||.|++...
T Consensus 126 ~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~ 205 (431)
T cd00617 126 AQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKE 205 (431)
T ss_pred cccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhc
Confidence 3789999999853 38899999999998 88886 55789999999999999999331
Q ss_pred ---CCccccc-c------cCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhh-----cCCCccHHHHHHHHH
Q 009172 338 ---PLNQKAL-S------LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHV-----LGGALNPNAAYLIIR 401 (541)
Q Consensus 338 ---~~~~~~l-~------~gaDivv~S~sK~lgg~g~v~gG~vv~~~-~li~~l~~~~~~-----~g~~~s~~~a~l~l~ 401 (541)
++...+. + ...|.+..|++|-.+.+ +||++++++ +++++++..... ..+.++......+..
T Consensus 206 r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~---~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~ 282 (431)
T cd00617 206 REEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN---IGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQ 282 (431)
T ss_pred ccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc---cceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHH
Confidence 1111111 1 24788999999977755 478999987 588888754311 112233333333233
Q ss_pred hHHHH--HHHHHHHHHHHHHHHHHHHhC
Q 009172 402 GMKTL--HLRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 402 ~l~tl--~~r~~~~~~na~~la~~L~~~ 427 (541)
+|+.. ...+++..++++++.+.|.+.
T Consensus 283 gL~e~~~~~~l~~~~~~r~~l~~~L~~~ 310 (431)
T cd00617 283 GLREAVEEDYLRHRVEQVRYLGDRLDEA 310 (431)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 55332 244555566778888999875
No 234
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.80 E-value=3.4e-17 Score=178.24 Aligned_cols=145 Identities=17% Similarity=0.249 Sum_probs=107.3
Q ss_pred cEEEeCCHHHHHHHHHHH-----hccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC------------CCHHHHH
Q 009172 227 STVIMASGMSASTVMLLA-----LVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------------ADMEGLE 289 (541)
Q Consensus 227 ~~i~~sSG~~Ai~~al~a-----ll~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~------------~dle~Le 289 (541)
+.+++.+|++|+..++.+ ++.|||+|+++.|.|........ +...|++++.++. .|+++++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~--l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~ 234 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPE--LPRYDFEVVRIKADEMTEDGTHTWQYPDKELE 234 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHH--HhcCCcEEEEeecccccccccccCCCCHHHHH
Confidence 344555556999988876 78999999999999988654332 3334666665542 2568899
Q ss_pred HhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhC--CCEEEEEcCCCCCCc--cccccc--CCcEEEECCccccC
Q 009172 290 AALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKK--GAIVCIDGTFATPLN--QKALSL--GADLVLHSATKFIG 360 (541)
Q Consensus 290 ~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~--gillvvDea~a~~~~--~~~l~~--gaDivv~S~sK~lg 360 (541)
+++++ ++|+|++++|+||||.+++ +++|+++|++| +++||+||+|..... ...... ...+++.|+||+++
T Consensus 235 ~~~~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 235 KLRDP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFG 313 (521)
T ss_pred HhcCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhcc
Confidence 88876 5999999999999999998 66778889886 999999999876432 111111 24589999999998
Q ss_pred CCCCceEEEEEeChH
Q 009172 361 GHNDVLAGSISGSGK 375 (541)
Q Consensus 361 g~g~v~gG~vv~~~~ 375 (541)
..|. ..|+++++++
T Consensus 314 ~~G~-RlG~i~~~~~ 327 (521)
T TIGR03801 314 ATGW-RLGTIALHKD 327 (521)
T ss_pred Cchh-hhhhhhcCch
Confidence 7764 4688887654
No 235
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=4e-16 Score=157.60 Aligned_cols=218 Identities=17% Similarity=0.180 Sum_probs=151.9
Q ss_pred CchhHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEE
Q 009172 208 GNPTTVVVEEKMSALEG--------AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATV 279 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g--------~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~ 279 (541)
+.......|+++|++.. +++++++++..+||..++.+|.+||..|++++|.|+-+. ....-.|+++++
T Consensus 101 ps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~----~~a~~~~lEVR~ 176 (447)
T KOG0259|consen 101 PSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYD----TRAIYSGLEVRY 176 (447)
T ss_pred CccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHH----HhhhhcCceeEe
Confidence 45667788999999853 245666666679999999999999999999999997643 334556899999
Q ss_pred eCC-------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCc-cccc----
Q 009172 280 IDP-------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLN-QKAL---- 344 (541)
Q Consensus 280 vd~-------~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~-~~~l---- 344 (541)
+|. .|++.+|+++++ +|.++++.+|+||.|.++. +++|+++|+++|+++|.||+|...++ .+++
T Consensus 177 ydlLPe~~weIDL~~veal~DE-NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg 255 (447)
T KOG0259|consen 177 YDLLPEKDWEIDLDGVEALADE-NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMG 255 (447)
T ss_pred ecccCcccceechHHHHHhhcc-CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchh
Confidence 874 289999999998 4999999999999999998 77999999999999999999765332 1221
Q ss_pred cc---CCcEEEECCccccCCCCCceEEEEEeCh--------HHHHHHHHHhhhcCCCccHHHHHH---HHHhHH-HHHHH
Q 009172 345 SL---GADLVLHSATKFIGGHNDVLAGSISGSG--------KLVTQIRNLHHVLGGALNPNAAYL---IIRGMK-TLHLR 409 (541)
Q Consensus 345 ~~---gaDivv~S~sK~lgg~g~v~gG~vv~~~--------~li~~l~~~~~~~g~~~s~~~a~l---~l~~l~-tl~~r 409 (541)
.+ -..+.+.+.+|-+--+|.. .||++..+ ..++.+........+...-..+++ +.+.-+ -+..+
T Consensus 256 ~fssiVPVitlggisKrW~VPGWR-lGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~ 334 (447)
T KOG0259|consen 256 KFSSIVPVITLGGISKRWIVPGWR-LGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKK 334 (447)
T ss_pred hccccCceEeecccccccccCCce-eeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHH
Confidence 11 1347788999988877765 56666432 233444444333222111111111 111111 13444
Q ss_pred HHHHHHHHHHHHHHHHhCCCce
Q 009172 410 VQQQNSTALRMAEILEAHPKVK 431 (541)
Q Consensus 410 ~~~~~~na~~la~~L~~~p~v~ 431 (541)
..-...|++-..++|++.|.+.
T Consensus 335 ~~~lk~na~l~y~~Lk~IP~l~ 356 (447)
T KOG0259|consen 335 LSFLKSNADLCYSRLKDIPCLT 356 (447)
T ss_pred HHHHHhhHHHHHHHHhcCCCcc
Confidence 5556678888889999887764
No 236
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.77 E-value=1.6e-17 Score=153.41 Aligned_cols=156 Identities=23% Similarity=0.271 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHh--CCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCC-----
Q 009172 212 TVVVEEKMSALE--GAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPAD----- 284 (541)
Q Consensus 212 ~~~Le~~LA~l~--g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~d----- 284 (541)
.+++++.+++++ +.+..+++++|++|+.+++.++.++|++|+++++.|++... ..+...|.++..++..+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ 78 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW---VAAELAGAKPVPVPVDDAGYGG 78 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh---hHHHhcCCEEEEeccCCCCccc
Confidence 468999999999 77889999999999999999998889999999999998763 23456688888776431
Q ss_pred H--HHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc----cccccCCcEEEECCccc
Q 009172 285 M--EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----KALSLGADLVLHSATKF 358 (541)
Q Consensus 285 l--e~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~----~~l~~gaDivv~S~sK~ 358 (541)
. +.+++.....+++++++++++|++|...|+++|.++|+++|+++|+|+++..+... .+...++|+++.|++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~K~ 158 (170)
T cd01494 79 LDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKN 158 (170)
T ss_pred hhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEEcccc
Confidence 1 24544443336999999999999999999999999999999999999998765443 35567899999999999
Q ss_pred cCCCCCceEEEEEeC
Q 009172 359 IGGHNDVLAGSISGS 373 (541)
Q Consensus 359 lgg~g~v~gG~vv~~ 373 (541)
+++.+ +|+++.+
T Consensus 159 ~~~~~---~G~l~~~ 170 (170)
T cd01494 159 LGGEG---GGVVIVK 170 (170)
T ss_pred cCCCc---eEEEEeC
Confidence 99854 7888753
No 237
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.77 E-value=1.1e-16 Score=174.59 Aligned_cols=165 Identities=15% Similarity=0.236 Sum_probs=124.0
Q ss_pred hhHHHHHHHHHHHhCCCcE-EEeCCHHHHHHHH---HH-HhccCCC----EEEEcCCCCcchHHHHHhhcccCCcEEEEe
Q 009172 210 PTTVVVEEKMSALEGAEST-VIMASGMSASTVM---LL-ALVPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVI 280 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~~~-i~~sSG~~Ai~~a---l~-all~~GD----~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v 280 (541)
....++++.+++++|.+.+ +..++|+.+.... ++ .++++|| +|+++++.|+.+... +...|++++.+
T Consensus 113 el~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~----~~~~G~~vv~v 188 (481)
T PRK04366 113 ELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPAS----AAMAGFKVVEI 188 (481)
T ss_pred HHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHH----HHHcCCEEEEe
Confidence 3466778999999998654 4446666443332 22 3456776 999999999887643 34568888877
Q ss_pred CC-----CCHHHHHHhccCCCeeEEEEeCCCCCCCcc-cCHHHHHHHHHhCCCEEEEEcCCCCC-C-cccccccCCcEEE
Q 009172 281 DP-----ADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP-L-NQKALSLGADLVL 352 (541)
Q Consensus 281 d~-----~dle~Le~ai~~~~tklV~lesp~NPtG~v-~di~~Ia~la~~~gillvvDea~a~~-~-~~~~l~~gaDivv 352 (541)
+. .|+++|++++++ +|++|++++|| |+|.+ .|+++|+++||++|++++||+++... + ..++.++|+|+++
T Consensus 189 ~~~~~~~~D~e~L~~~i~~-~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~ 266 (481)
T PRK04366 189 PSNEDGLVDLEALKAAVGE-DTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVH 266 (481)
T ss_pred ecCCCCCcCHHHHHhhccc-CCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEE
Confidence 54 378999999987 49999999988 99987 58999999999999999999997532 1 2367788999999
Q ss_pred ECCccccCCCC---CceEEEEEeChHHHHHH
Q 009172 353 HSATKFIGGHN---DVLAGSISGSGKLVTQI 380 (541)
Q Consensus 353 ~S~sK~lgg~g---~v~gG~vv~~~~li~~l 380 (541)
.|+||+++++- ..-+|+++.++++.+.+
T Consensus 267 ~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~l 297 (481)
T PRK04366 267 LNLHKTFSTPHGGGGPGSGPVGVKEELAPFL 297 (481)
T ss_pred EechhhcCCCCCCCCCCeeeeeehhhhHhhC
Confidence 99999987442 12367888877766655
No 238
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.77 E-value=2.5e-16 Score=166.27 Aligned_cols=250 Identities=18% Similarity=0.182 Sum_probs=164.5
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCC-CEEEEcCCCCcchHHHHHhhccc------C---C
Q 009172 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAG-GHIVTTTDCYRKTRIFIETVLPK------M---G 274 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al-l~~G-D~VIv~~~~y~~~~~~~~~~l~~------~---G 274 (541)
.+.++...+|.+.+++..+.+.+++++||++|+..++... ..+| ++|++.++.|++........... + .
T Consensus 67 ~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~ 146 (377)
T PRK02936 67 LFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLL 146 (377)
T ss_pred ccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCC
Confidence 3456777888888888777678899999999999999843 2244 67888888887643211111110 0 1
Q ss_pred cEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCCCc-cccc---cc
Q 009172 275 ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-QKAL---SL 346 (541)
Q Consensus 275 i~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~~~-~~~l---~~ 346 (541)
..+.+++..|++++++.+++ ++++|++|.+.+++|.+.+ +++|.++|++||+++|+||++..... ..+. ..
T Consensus 147 ~~~~~~~~~d~~~l~~~~~~-~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~ 225 (377)
T PRK02936 147 PGFTHVPFNDIKALKEVMNE-EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQF 225 (377)
T ss_pred CCceEeCCCCHHHHHHhccC-CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhh
Confidence 13445666789999999986 5999999999998887653 88999999999999999999753211 1111 12
Q ss_pred C--CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHH
Q 009172 347 G--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAE 422 (541)
Q Consensus 347 g--aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~--~r~~~~~~na~~la~ 422 (541)
+ .|++ +++|.+++ | ..+|++++++++.+.+...........++..+..+...++.+. ..+++..++.+.+.+
T Consensus 226 ~~~~di~--t~sK~l~~-G-~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~ 301 (377)
T PRK02936 226 GLDPDIV--TVAKGLGN-G-IPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQ 301 (377)
T ss_pred CCCCcEE--EEcccccC-C-CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 2 4554 68999994 3 4578899998888877543222222356777776666766642 344555666777777
Q ss_pred HHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCce
Q 009172 423 ILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI 481 (541)
Q Consensus 423 ~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~i 481 (541)
.|++. +.+..+ ++.|.++++++... ...+.+.+...++
T Consensus 302 ~L~~~~~~~~~~~~v------------------~~~g~~~~i~~~~~---~~~~~~~l~~~gv 343 (377)
T PRK02936 302 KLQEELEHLECVKNI------------------RGKGLMIGIECTEE---VAPVIEQLREEGL 343 (377)
T ss_pred HHHHHHhhCCcEEeE------------------eecceEEEEEecch---HHHHHHHHHHCCe
Confidence 77652 221111 23567899999643 4455555554443
No 239
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.76 E-value=2.2e-16 Score=169.19 Aligned_cols=287 Identities=15% Similarity=0.028 Sum_probs=186.1
Q ss_pred hhHHHHHHHHHHHhCCC----cEEE--eCCHHHHHHHHHHHhc--------cCC-----CEEEEcCCCCcchHHHHHhhc
Q 009172 210 PTTVVVEEKMSALEGAE----STVI--MASGMSASTVMLLALV--------PAG-----GHIVTTTDCYRKTRIFIETVL 270 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~----~~i~--~sSG~~Ai~~al~all--------~~G-----D~VIv~~~~y~~~~~~~~~~l 270 (541)
...++.++.+++++|.+ +.++ +++|++|+++++.+.. +.| -+|+++..+|.+.... +
T Consensus 80 ~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka----~ 155 (431)
T TIGR01788 80 EIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKF----A 155 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHH----H
Confidence 56677788999999975 3333 5777899998886542 112 3799999999886643 3
Q ss_pred ccCCcEEEEeCC------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC------CCEEEEEcCCCCC
Q 009172 271 PKMGITATVIDP------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK------GAIVCIDGTFATP 338 (541)
Q Consensus 271 ~~~Gi~v~~vd~------~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~------gillvvDea~a~~ 338 (541)
+.+|++++.++. .|+++|+++|+++ |.+|.+...||.+|.+.|+++|+++|+++ |+++++|.+|+.+
T Consensus 156 ~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~-t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~ 234 (431)
T TIGR01788 156 RYFDVELREVPMDPGRYVIDPEQVVEAVDEN-TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGF 234 (431)
T ss_pred HHcCceeEEEecCCCceeeCHHHHHHHHhhC-CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHH
Confidence 334666666542 2789999999874 89999999999999999999999999999 9999999998842
Q ss_pred C--------cccccccCCcEEEECCcccc-CCCCCceEEEEEeChH--HHHHHHHHhhhcC----------CCc--cHHH
Q 009172 339 L--------NQKALSLGADLVLHSATKFI-GGHNDVLAGSISGSGK--LVTQIRNLHHVLG----------GAL--NPNA 395 (541)
Q Consensus 339 ~--------~~~~l~~gaDivv~S~sK~l-gg~g~v~gG~vv~~~~--li~~l~~~~~~~g----------~~~--s~~~ 395 (541)
. ..+....++|.+..|.||++ ++.| .|+++.+++ +.+.+.......+ +.. ....
T Consensus 235 ~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g---~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~ 311 (431)
T TIGR01788 235 IAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPG---VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIA 311 (431)
T ss_pred HHHHhCCCchhhcCCCCceEEEECchhccCCCCC---cEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHH
Confidence 2 11112347899999999988 5555 576665543 2222211100111 111 1223
Q ss_pred HHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---HHHHH
Q 009172 396 AYLIIRGM--KTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATI 470 (541)
Q Consensus 396 a~l~l~~l--~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~---~~~~~ 470 (541)
.|+.++.+ ..+...+++..+.++++.+.|++.|.++-+ .|. | ..++++|.+++. .....
T Consensus 312 ~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~-~~~----~-----------~~~iV~Fr~~~~~~~~~~~~ 375 (431)
T TIGR01788 312 QYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEII-SDG----S-----------GIPLVAFKLKDDADPGYTLY 375 (431)
T ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEe-eCC----C-----------CceEEEEEeCCCCCCCcCHH
Confidence 45544333 346666778889999999999998876543 221 1 246899999751 12234
Q ss_pred HHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCC-CCeEEEEec----CCCHHHHHHHHHHHHhhC
Q 009172 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIM-DNLVRFSFG----VEDFEDLKADVLQALHAI 541 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~-~~~IRlSvG----~Ed~edli~dL~~AL~~i 541 (541)
.+.+.|...++.++.- ..|+ ++. .-.+|+++- .+..+++++||..++..+
T Consensus 376 ~l~~~L~~~G~~~~~~------~~p~---------------~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 376 DLSHRLRERGWIVPAY------TLPK---------------NAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred HHHHHHHHCCCcccCC------CCCC---------------ccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 5555555444332210 0111 111 236899884 346788888888887653
No 240
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.76 E-value=6.1e-16 Score=165.05 Aligned_cols=287 Identities=15% Similarity=0.203 Sum_probs=181.1
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcchHHHHHhh---------c
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETV---------L 270 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all--------~~GD~VIv~~~~y~~~~~~~~~~---------l 270 (541)
.++...+|+++|+++.+.+.+++++||++|+..++.... ...+.|+..+..|++.......+ +
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~ 159 (403)
T PRK05093 80 TNEPALRLAKKLIDATFAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGF 159 (403)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcC
Confidence 456678999999999887899999999999999987431 12357888888777743211110 1
Q ss_pred ccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCccc-C----HHHHHHHHHhCCCEEEEEcCCCCCCc-cccc
Q 009172 271 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D----VKLVSDLCHKKGAIVCIDGTFATPLN-QKAL 344 (541)
Q Consensus 271 ~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~-d----i~~Ia~la~~~gillvvDea~a~~~~-~~~l 344 (541)
......+..++..|++++++.+.+ ++++|++| |.||+|.+. + +++|.++|++||+++|+||+|..... ....
T Consensus 160 ~~~~~~~~~~~~~d~~~l~~~l~~-~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~ 237 (403)
T PRK05093 160 GPKPADITHVPFNDLAAVKAVIDD-HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF 237 (403)
T ss_pred CCCCCCcEEeCCCCHHHHHHHhcC-CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch
Confidence 112234566777899999999976 59999998 666776543 3 88999999999999999999764211 1111
Q ss_pred ---ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHHHHH
Q 009172 345 ---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALR 419 (541)
Q Consensus 345 ---~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~--~r~~~~~~na~~ 419 (541)
..+.+.-+.|++|.+++ | ...|++++++++++.+...........++..++.++..|+.+. ...++..++.+.
T Consensus 238 ~~~~~~~~pdi~s~sK~l~~-G-~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~ 315 (403)
T PRK05093 238 AYMHYGVTPDILTSAKALGG-G-FPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQR 315 (403)
T ss_pred hhhhcCCCCCEEEecccccC-C-cceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 12222224578999994 3 5688999999888877643222222345666666666555442 234455566677
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCCCcccceecCccc
Q 009172 420 MAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 420 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~-~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
+.+.|++... .++.. ...++.|.+++++++.+. ....+|.+.+...++.+..+
T Consensus 316 l~~~L~~~~~----~~~~~----------~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~------------ 369 (403)
T PRK05093 316 FVDGLQKINQ----KYGVF----------SEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVA------------ 369 (403)
T ss_pred HHHHHHHHHh----hCCCe----------EeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecC------------
Confidence 7777765421 00000 011346778999986431 24556776665445433211
Q ss_pred ccccCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHh
Q 009172 499 SYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALH 539 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~E----d~edli~dL~~AL~ 539 (541)
..+.|||++... +.++.++.|.++++
T Consensus 370 ---------------g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~ 399 (403)
T PRK05093 370 ---------------GPDVLRFAPSLVIEEADIDEGLARFEKAVA 399 (403)
T ss_pred ---------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 136899987654 34445555555554
No 241
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.75 E-value=1.3e-15 Score=162.43 Aligned_cols=258 Identities=19% Similarity=0.196 Sum_probs=167.7
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc---------cC-CCEEEEcCCCCcch-HHHHHhhc-----
Q 009172 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---------PA-GGHIVTTTDCYRKT-RIFIETVL----- 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all---------~~-GD~VIv~~~~y~~~-~~~~~~~l----- 270 (541)
+..+...+|+++|+++.|.+.+++++||++|+..++.... .+ .++|+.....|++. ...+...-
T Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~ 155 (401)
T TIGR01885 76 FYNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSR 155 (401)
T ss_pred cCCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccc
Confidence 3567889999999999998889999999999999988641 13 46788888888763 33221100
Q ss_pred ccCC---cEEEEeCCCCHHHHHHhccC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCC-Cc
Q 009172 271 PKMG---ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-LN 340 (541)
Q Consensus 271 ~~~G---i~v~~vd~~dle~Le~ai~~--~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~-~~ 340 (541)
..++ ..+..++..|+++++++++. .++.+|++|.+.+++|.+.+ +++|.++|++||+++|+||++... ..
T Consensus 156 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~ 235 (401)
T TIGR01885 156 TNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRT 235 (401)
T ss_pred cccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc
Confidence 0122 23455666789999988852 24889999999999999987 999999999999999999996421 11
Q ss_pred -----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHH
Q 009172 341 -----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQ 413 (541)
Q Consensus 341 -----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~--r~~~~ 413 (541)
........|+++ ++|.+++++. ..|++++++++++.++..........+|..+..+...++.+.. ..++.
T Consensus 236 G~~~~~~~~~~~~di~~--~gK~l~~g~~-~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~ 312 (401)
T TIGR01885 236 GKLLCVDHENVKPDIVL--LGKALSGGVY-PVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENA 312 (401)
T ss_pred chhhHHhhcCCCCCEEE--eeccccCCCC-CcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHH
Confidence 111233567776 5699986432 3577888888887765422211112346666666666665543 22344
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--HHHHHHHHHcCCCceee
Q 009172 414 NSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDALKIPYIAP 483 (541)
Q Consensus 414 ~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~--~~~~~~l~~L~~~~iav 483 (541)
.+...++.+.|++.+. + +. ...++.|.|+.+.++.+. ....++.+.|...++.+
T Consensus 313 ~~~~~~~~~~L~~l~~------~-~~---------~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v 368 (401)
T TIGR01885 313 EKLGEIFRDQLKKLPK------P-II---------TEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLA 368 (401)
T ss_pred HHHHHHHHHHHHhccC------C-ce---------eEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEE
Confidence 4555666666665421 0 00 011346788888885431 24567777776555443
No 242
>PLN03032 serine decarboxylase; Provisional
Probab=99.75 E-value=5.4e-16 Score=163.04 Aligned_cols=225 Identities=17% Similarity=0.143 Sum_probs=164.2
Q ss_pred hcccCCCCCCCCCchhHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhh
Q 009172 196 EKRRASFEYGRYGNPTTVVVEEKMSALEGAE--S--TVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV 269 (541)
Q Consensus 196 ~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~--~--~i~~sSG~~Ai~~al~all--~~GD~VIv~~~~y~~~~~~~~~~ 269 (541)
+++...|.|++......+++++.+++++|.+ + .+++++|++|+..++.... .++++|+++..+|.+....++
T Consensus 52 gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~-- 129 (374)
T PLN03032 52 GDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR-- 129 (374)
T ss_pred CCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHH--
Confidence 3455667888888889999999999999973 3 3888888999988877542 355799999999998775442
Q ss_pred cccCCcEEEEe--CC---CCHHHHHHhccCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCC-----CEEEEEcCCCC
Q 009172 270 LPKMGITATVI--DP---ADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG-----AIVCIDGTFAT 337 (541)
Q Consensus 270 l~~~Gi~v~~v--d~---~dle~Le~ai~~~--~tklV~lesp~NPtG~v~di~~Ia~la~~~g-----illvvDea~a~ 337 (541)
.+|+.++.+ +. .|+++|+++|+++ ++.+|++...+|++|.+.|+++|+++|+++| +++++|.+++.
T Consensus 130 --~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg 207 (374)
T PLN03032 130 --MYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFG 207 (374)
T ss_pred --HcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchh
Confidence 233333333 32 3899999999753 3778888889999999999999999999996 58999999876
Q ss_pred CCc-cc------ccccCCcEEEECCccccC-CCCCceEEEEEeChHHHHHHHHHhh--------hcCCCc--cHHHHHHH
Q 009172 338 PLN-QK------ALSLGADLVLHSATKFIG-GHNDVLAGSISGSGKLVTQIRNLHH--------VLGGAL--NPNAAYLI 399 (541)
Q Consensus 338 ~~~-~~------~l~~gaDivv~S~sK~lg-g~g~v~gG~vv~~~~li~~l~~~~~--------~~g~~~--s~~~a~l~ 399 (541)
+.. .. ....++|.++.|.||+++ +.+ .|+++.+++..+.+..... ..|+.. .....|+.
T Consensus 208 ~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g---~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~ 284 (374)
T PLN03032 208 LMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMP---CGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYT 284 (374)
T ss_pred hhhhccCCCcccCCCcCCcEEEECcccccCCCcC---eEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHH
Confidence 422 10 123479999999999999 555 6777777666654432111 122221 24455655
Q ss_pred HH--hHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009172 400 IR--GMKTLHLRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 400 l~--~l~tl~~r~~~~~~na~~la~~L~~~ 427 (541)
++ |.+.+..++++..++++++.+.|++.
T Consensus 285 l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~ 314 (374)
T PLN03032 285 LRRKGYRGIKRDVQHCMRNAHYLKDRLTEA 314 (374)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 43 45667788899999999999999875
No 243
>PRK02769 histidine decarboxylase; Provisional
Probab=99.75 E-value=5.5e-16 Score=163.81 Aligned_cols=234 Identities=18% Similarity=0.150 Sum_probs=161.1
Q ss_pred ccCCCCCCCCCchhHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc
Q 009172 198 RRASFEYGRYGNPTTVVVEEKMSALEGAE--S--TVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP 271 (541)
Q Consensus 198 ~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~--~--~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~ 271 (541)
....+.|++......+++.+.+|+++|++ + .+++++|++++..++... ..++++|++++.+|.+....+. .+.
T Consensus 53 p~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~-~lg 131 (380)
T PRK02769 53 PYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIAR-LLR 131 (380)
T ss_pred ccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHH-HcC
Confidence 34455666666677778889999999974 3 367777889987776543 3578999999999999776553 333
Q ss_pred cCCcEEEEeC--CCCHHHHHHhccCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCC---CEEEEEcCCCCCCc----
Q 009172 272 KMGITATVID--PADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCIDGTFATPLN---- 340 (541)
Q Consensus 272 ~~Gi~v~~vd--~~dle~Le~ai~~~--~tklV~lesp~NPtG~v~di~~Ia~la~~~g---illvvDea~a~~~~---- 340 (541)
..+..+...+ ..|+++|+++++++ +|.+|++..++|++|.+.|+++|+++|+++| ++++||.+++.+..
T Consensus 132 ~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~ 211 (380)
T PRK02769 132 IKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVN 211 (380)
T ss_pred CCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccC
Confidence 2223332222 24899999999763 4889999999999999999999999999998 69999999877432
Q ss_pred ----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--------hcCCC--ccHHHHHHHHHhH--H
Q 009172 341 ----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--------VLGGA--LNPNAAYLIIRGM--K 404 (541)
Q Consensus 341 ----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~--------~~g~~--~s~~~a~l~l~~l--~ 404 (541)
.+... ++|.++.|.||+++++.+ .|+++.+++..+.+..... ..|+. ......|.+++.+ +
T Consensus 212 ~~~~~d~~~-~vDsis~s~HK~~~~P~g--~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~ 288 (380)
T PRK02769 212 NPPPFSFAD-GIDSIAISGHKFIGSPMP--CGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSK 288 (380)
T ss_pred ccccCCccC-CCCEEEECCcccCCCCCC--cEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHH
Confidence 22223 899999999999984432 5777777766655421111 11222 1234455544433 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCC
Q 009172 405 TLHLRVQQQNSTALRMAEILEAHPKVKRVHYP 436 (541)
Q Consensus 405 tl~~r~~~~~~na~~la~~L~~~p~v~~V~~P 436 (541)
.+..+.++..+.++++.+.|++. ++..+..|
T Consensus 289 G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p 319 (380)
T PRK02769 289 GLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNP 319 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCC
Confidence 45666777788889999988764 44444444
No 244
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.75 E-value=1.4e-15 Score=161.98 Aligned_cols=289 Identities=15% Similarity=0.170 Sum_probs=181.9
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcchHHHHHhhcc------
Q 009172 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVLP------ 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all--------~~GD~VIv~~~~y~~~~~~~~~~l~------ 271 (541)
.+.++...+|+++|+++.+.+.+++++||++|+..+++... ...++||..+..|++.....-..-.
T Consensus 73 ~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~ 152 (397)
T TIGR03246 73 GYTNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQ 152 (397)
T ss_pred ccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccc
Confidence 35678889999999999988899999999999999998541 1235788888777774322111100
Q ss_pred ---cCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCccc-C---HHHHHHHHHhCCCEEEEEcCCCCC----C-
Q 009172 272 ---KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP----L- 339 (541)
Q Consensus 272 ---~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~-d---i~~Ia~la~~~gillvvDea~a~~----~- 339 (541)
.....+..++..|++++++++++ ++++|++|.++++.|.+. | +++|.++|++||+++|+||++... .
T Consensus 153 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~ 231 (397)
T TIGR03246 153 GFAPLPGGIKHAPYNDLAAAKALISD-KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGEL 231 (397)
T ss_pred CCCCCCCceEEeCCCCHHHHHHHhcc-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccc
Confidence 11123456677899999999976 599999998777777654 3 889999999999999999997321 1
Q ss_pred -cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHH
Q 009172 340 -NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNST 416 (541)
Q Consensus 340 -~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~--~r~~~~~~n 416 (541)
.........|++ +++|.+++ | ...|++++++++.+.+...........+|..+..++..++.+. ...++..++
T Consensus 232 ~a~~~~gv~pDi~--t~~K~lgg-G-~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~ 307 (397)
T TIGR03246 232 YAYMHYGVTPDIL--TSAKALGG-G-FPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQR 307 (397)
T ss_pred hhhhhcCCCCCEE--EeehhhhC-C-cceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 111122235665 68999974 3 4578888888888776532221111235555555555555432 234445556
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCCcccceecC
Q 009172 417 ALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 417 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
.+++.+.|++... .++.. ...+|.|.++.+++... ......|.+.|...++-+..
T Consensus 308 ~~~l~~~L~~l~~----~~~~~----------~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~---------- 363 (397)
T TIGR03246 308 HDLFVDGLEKINA----RYNVF----------SEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALI---------- 363 (397)
T ss_pred HHHHHHHHHHHHh----cCCCe----------EeeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEee----------
Confidence 6666666655321 01100 11245678888888532 23456676666554433221
Q ss_pred cccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009172 496 AIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~~ 540 (541)
...+.||++..+ ++.++.++.|+++|.+
T Consensus 364 -----------------~g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 364 -----------------AGPNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred -----------------cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 013679996554 4556666666666654
No 245
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=2.8e-16 Score=162.21 Aligned_cols=290 Identities=17% Similarity=0.195 Sum_probs=193.6
Q ss_pred CCCCCCCchhHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHhc---c-C-CCEEEEcCCCCcch-HHH--------H
Q 009172 202 FEYGRYGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLALV---P-A-GGHIVTTTDCYRKT-RIF--------I 266 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g-~~~~i~~sSG~~Ai~~al~all---~-~-GD~VIv~~~~y~~~-~~~--------~ 266 (541)
|.-.-|.++...+|.++|+++.+ .+.+++++||+||++.++...- . + .-+||.....|++- ... +
T Consensus 76 h~sn~~~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky 155 (404)
T COG4992 76 HVSNLFYNEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKY 155 (404)
T ss_pred hcccccCChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhh
Confidence 44455678999999999999997 8889999999999999997432 1 2 23888888888771 111 1
Q ss_pred HhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCC----C
Q 009172 267 ETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFAT----P 338 (541)
Q Consensus 267 ~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~----~ 338 (541)
+..+...--.+++++..|+++++++|++ +|.+|++|.+.-..|.+.+ ++++.++|++||+++|.||++.. +
T Consensus 156 ~~~F~Pl~~g~~~vpfnDi~al~~ai~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG 234 (404)
T COG4992 156 RKGFGPLLPGFRHVPFNDIEALEAAIDE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG 234 (404)
T ss_pred ccCCCCCCCCceecCCCCHHHHHHHhcc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccc
Confidence 1111112224667788899999999998 5999999999999998876 77999999999999999999753 1
Q ss_pred --CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCC--ccHHHHHHHHHhHHHHHH--HHHH
Q 009172 339 --LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGA--LNPNAAYLIIRGMKTLHL--RVQQ 412 (541)
Q Consensus 339 --~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~--~s~~~a~l~l~~l~tl~~--r~~~ 412 (541)
+.......-.||++ +.|.+||+ ...|+++.++++.+.+.... +|++ -+|+.+..+...++.+.. -+++
T Consensus 235 k~fA~e~~gV~PDI~t--laK~LgGG--~PigA~la~~~~~~~~~~G~--HgSTfGGNpLacAv~~a~l~~l~~e~ll~~ 308 (404)
T COG4992 235 KLFAYEHYGVEPDILT--LAKALGGG--FPIGAMLATEEIASAFTPGD--HGSTFGGNPLACAVALAVLEVLLEEGLLEN 308 (404)
T ss_pred hHHHHHHhCCCCCEEE--eeccccCC--ccceeeEEchhhhhcCCCCc--ccCCCCcCHHHHHHHHHHHHHHcchhHHHH
Confidence 11222333457766 89999976 45677777755444443222 2222 367888877777776532 2333
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccce
Q 009172 413 QNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 492 (541)
Q Consensus 413 ~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~ 492 (541)
..+...++.+.|++.. ..||- -+..+|.|-|+.+++.... .+..++..+...++-+...
T Consensus 309 v~~~g~~~~~~L~~l~----~~~~~----------v~~vRG~GLmiGiel~~~~-~a~~~~~~~~~~gvL~~~a------ 367 (404)
T COG4992 309 VREKGEYLLQRLRELK----RRYPL----------VKEVRGRGLMIGIELKEPY-RARDIVRALREEGVLVLPA------ 367 (404)
T ss_pred HHHHHHHHHHHHHHHh----hcCCc----------eeeeecceeEEEEEecCcc-cHHHHHHHHHHCCeEEecC------
Confidence 3344444555555421 11221 1233678999999997532 4566777776655433322
Q ss_pred ecCcccccccCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhh
Q 009172 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALHA 540 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG----~Ed~edli~dL~~AL~~ 540 (541)
.++.|||.-. .|+.++.++.|+++|+.
T Consensus 368 ---------------------~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~ 398 (404)
T COG4992 368 ---------------------GPNVIRFLPPLVITEEEIDEALDALERALAA 398 (404)
T ss_pred ---------------------CCCeEEecCCccCCHHHHHHHHHHHHHHHHH
Confidence 2346776544 47788888888888864
No 246
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=2.7e-16 Score=151.47 Aligned_cols=289 Identities=14% Similarity=0.147 Sum_probs=196.2
Q ss_pred CCCchhHHHHHHHHHHHhCC-CcEEEeCCHH-HHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 206 RYGNPTTVVVEEKMSALEGA-ESTVIMASGM-SASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~-~~~i~~sSG~-~Ai~~al~all~~G-D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
+|++|...+++.++++--+- .+.|++.-|+ +.|.++++..+-|| ++|+...|+|..+. --+...+++|+.++.
T Consensus 65 ~~~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~----v~A~iNd~eVvkvpl 140 (375)
T KOG0633|consen 65 VYPDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYV----VDAAINDAEVVKVPL 140 (375)
T ss_pred ccCCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEE----EEeecCCceEEEecC
Confidence 34555566666666655443 4688999998 89999999999999 89999999997632 224456788877753
Q ss_pred -----CCHHHHHHhccCC-CeeEEEEeCCCCCCCcccCHHHHHHHHHhC-CCEEEEEcCCCCCCcc-c----ccccCCcE
Q 009172 283 -----ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKK-GAIVCIDGTFATPLNQ-K----ALSLGADL 350 (541)
Q Consensus 283 -----~dle~Le~ai~~~-~tklV~lesp~NPtG~v~di~~Ia~la~~~-gillvvDea~a~~~~~-~----~l~~gaDi 350 (541)
.+.|++.+.+..+ ++|++|+++|+||||.....+.|.++.+-. +.++|+||+|..+... . ..++..-+
T Consensus 141 ~pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLi 220 (375)
T KOG0633|consen 141 NPDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLI 220 (375)
T ss_pred CCCccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCcee
Confidence 2788888887644 689999999999999999988888888753 7899999997654331 1 12344558
Q ss_pred EEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccH-HHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009172 351 VLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNP-NAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 351 vv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~-~~a~l~l~--~l~tl~~r~~~~~~na~~la~~L~~~ 427 (541)
++.++||.+|-.| +..|+.+.+.++++.+++....+...... ..+..++. .++.++.-...+.+.+.+|.+.|.+.
T Consensus 221 vlqTlSKsfGLAG-iRvG~~~~~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v 299 (375)
T KOG0633|consen 221 VLQTLSKSFGLAG-IRVGYGAFPLSIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEV 299 (375)
T ss_pred ehhhhhhhcCcce-eEeecccccHHHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999998554 44667677888888887766554433222 22222222 44556655566677788888888887
Q ss_pred CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHH-HcCCCceeecCCCcccceecCcccccccCCH
Q 009172 428 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFID-ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQ 505 (541)
Q Consensus 428 p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-~~~~~~~l~-~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~ 505 (541)
|.+.. ||+- ...+++-+++.|+ ...+++++. .+...++-+.+-|.+-
T Consensus 300 ~~~~~--~~gg--------------~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~--------------- 348 (375)
T KOG0633|consen 300 PFLND--YPGG--------------SDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEE--------------- 348 (375)
T ss_pred ccccC--CCCc--------------ccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCcc---------------
Confidence 77655 4431 1457888998754 233333333 3333454444433211
Q ss_pred HHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHH
Q 009172 506 SERLKYGIMDNLVRFSFGV-EDFEDLKADVLQA 537 (541)
Q Consensus 506 ~~~~~~gi~~~~IRlSvG~-Ed~edli~dL~~A 537 (541)
.-.|.+|+++|. |+..-|++-|++.
T Consensus 349 -------~c~G~lRitvGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 349 -------GCKGYLRITVGTPEENTVLMKCLKQF 374 (375)
T ss_pred -------ccceeEEEEcCCcccchHHHHHHHhh
Confidence 135899999996 4667788877764
No 247
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.74 E-value=4.4e-16 Score=164.82 Aligned_cols=280 Identities=14% Similarity=0.029 Sum_probs=176.1
Q ss_pred hhHHHHHHHHHHHhCCC---cEEEeC-CHHHHHHHHHHHhccC-CCEEEEcCCCCcchHHHHHhhcccCCc-EEEEeCCC
Q 009172 210 PTTVVVEEKMSALEGAE---STVIMA-SGMSASTVMLLALVPA-GGHIVTTTDCYRKTRIFIETVLPKMGI-TATVIDPA 283 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~---~~i~~s-SG~~Ai~~al~all~~-GD~VIv~~~~y~~~~~~~~~~l~~~Gi-~v~~vd~~ 283 (541)
...++.++.+++++|.. ++++++ ||+.++++++.+++++ ++.|++ ...|+.. +.....+++|+ +++.+...
T Consensus 48 ~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~--~~~~~~~~~g~~~v~~~~~~ 124 (378)
T PRK03080 48 ALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSK--WATDVVKQLKLEDPRVLEAD 124 (378)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHH--HHHHHHhhcCCCCceEeccC
Confidence 45678899999999962 466665 8899999999999875 455555 5677663 23223356687 77776532
Q ss_pred -----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEECCcc
Q 009172 284 -----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSATK 357 (541)
Q Consensus 284 -----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~S~sK 357 (541)
|+++ ++. +++|.+.+..|.||.+.|+++|++ |++|++++||.+++.+. +.+..+ +|+++.|.+|
T Consensus 125 ~g~~~d~~~----i~~--~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K 194 (378)
T PRK03080 125 YGSLPDLSA----VDF--DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK--LDVYTFSWQK 194 (378)
T ss_pred CCCCCCHhh----cCC--CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH--CcEEEEehhh
Confidence 3443 332 567899899999999999999999 88999999999987653 334333 7999999999
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHHhh-------------------h-cCC---CccHHHHHHHHHhHHHH------HH
Q 009172 358 FIGGHNDVLAGSISGSGKLVTQIRNLHH-------------------V-LGG---ALNPNAAYLIIRGMKTL------HL 408 (541)
Q Consensus 358 ~lgg~g~v~gG~vv~~~~li~~l~~~~~-------------------~-~g~---~~s~~~a~l~l~~l~tl------~~ 408 (541)
+++++. ..|+++.++++++++..... . .+. +++....+.+..+++.+ +.
T Consensus 195 ~l~~P~--G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~ 272 (378)
T PRK03080 195 VLGGEG--GHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDA 272 (378)
T ss_pred hCCCCC--ceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHH
Confidence 998743 26889999888776653110 0 011 12222222223344433 33
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCC
Q 009172 409 RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGG 487 (541)
Q Consensus 409 r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-~~~~~~~l~~L~~~~iavS~G~ 487 (541)
+.++..+.++.+.++|++.+.+. ++.+ .+. ...+.+++|.+++. ......++..+...++.+..|+
T Consensus 273 i~~r~~~l~~~l~~~l~~~~~~~-~~~~----~~~--------~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~ 339 (378)
T PRK03080 273 LIARTAANASVLYDWAEKTPWAT-PLVA----DPA--------TRSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEP 339 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcc-cccC----Ccc--------ccCccEEEEEcCCchHHHHHHHHHHHHHcCCeecccc
Confidence 34555566777778888765432 1111 011 01345899988751 0111224444432345555443
Q ss_pred cccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 488 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 488 ~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
.. ...+.+|+|++..++++.++.|.++|++
T Consensus 340 ~~-----------------------~~~~~vRis~~~~~t~~di~~l~~al~~ 369 (378)
T PRK03080 340 YR-----------------------DAPNGLRIWCGPTVEPADVEALTPWLDW 369 (378)
T ss_pred cc-----------------------CCCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 21 0246899999988777777777777653
No 248
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.74 E-value=1e-15 Score=164.18 Aligned_cols=281 Identities=17% Similarity=0.138 Sum_probs=180.0
Q ss_pred HHHHHHHhCCCcE-EEeCCHHHHHHHHHHHhccC-------------------------------CCEEEEcCCCCcchH
Q 009172 216 EEKMSALEGAEST-VIMASGMSASTVMLLALVPA-------------------------------GGHIVTTTDCYRKTR 263 (541)
Q Consensus 216 e~~LA~l~g~~~~-i~~sSG~~Ai~~al~all~~-------------------------------GD~VIv~~~~y~~~~ 263 (541)
.++..+++|++.+ +=.-||+.|+..++.++++| ||+|+..+..+++..
T Consensus 101 ~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHl 180 (493)
T PRK13580 101 AEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHL 180 (493)
T ss_pred HHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCee
Confidence 4556678898754 55679999999999999987 899999888877642
Q ss_pred HHH--HhhcccCCcEEEEe--C----CCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCC
Q 009172 264 IFI--ETVLPKMGITATVI--D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 264 ~~~--~~~l~~~Gi~v~~v--d----~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~ 335 (541)
..- ..... ....+... + ..|.+++++.+++. +++|++...+|- +...|+++|.++|+++|+++++|+++
T Consensus 181 thg~~~n~~~-~~~~~~~y~vd~~~g~iD~d~l~~~~~~~-~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH 257 (493)
T PRK13580 181 THGFRPNISG-KMFHQRSYGVDPDTGLLDYDEIAALAREF-KPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAH 257 (493)
T ss_pred ecCcccchhh-heeeeEecccCcccCccCHHHHHHHHhhc-CCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECch
Confidence 110 00000 00112111 2 24789999999875 677777788887 55889999999999999999999997
Q ss_pred CCCCcc--------cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-hhcCCCccHHHHHHHHHhHHHH
Q 009172 336 ATPLNQ--------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGALNPNAAYLIIRGMKTL 406 (541)
Q Consensus 336 a~~~~~--------~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~-~~~g~~~s~~~a~l~l~~l~tl 406 (541)
..++.. .+. .++|+++.|+||++.|+. ||++++++++++.+.... ..+|+.+.+..+..+.. ++.+
T Consensus 258 ~~Gligg~~~~~~~~~~-~~~D~vtgT~hKaL~GP~---GG~I~~~~~l~~~L~~a~P~i~gg~l~p~iAA~avA-l~e~ 332 (493)
T PRK13580 258 FAGLVAGKVFTGDEDPV-PHADIVTTTTHKTLRGPR---GGLVLAKKEYADAVDKGCPLVLGGPLPHVMAAKAVA-LAEA 332 (493)
T ss_pred hhceeccccchhhcCCC-CCCcEEEeCChhhccCCC---eEEEEecHHHHHHHhhCCCcccCCCccHHHHHHHHH-HHHH
Confidence 765431 232 379999999999996553 799999999888885433 34566666654444332 3222
Q ss_pred -----HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCce
Q 009172 407 -----HLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI 481 (541)
Q Consensus 407 -----~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~i 481 (541)
..+.++..+|++.+++.|.+... . +...+- -..++.+.+.+.......+-+.|...+|
T Consensus 333 ~~~ef~~y~~~l~~Na~~La~~L~~~G~-~-vv~ggT---------------dshIV~V~lg~~~~~g~~a~~~L~e~GI 395 (493)
T PRK13580 333 RTPEFQKYAQQVVDNARALAEGFLKRGA-R-LVTGGT---------------DNHLVLIDVTSFGLTGRQAESALLDAGI 395 (493)
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHhcCC-C-ccCCCC---------------CCCEEEEEeCCHHHHHHHHHHHHHHCCe
Confidence 33667888999999999987532 1 111111 2358999986422223344445555555
Q ss_pred eecCCCcccceecCcccccccCCHHHHHhcC-CCCCeEEEEecC--------CCHHHHHHHHHHHHh
Q 009172 482 APSFGGCESIVDQPAIMSYWDLSQSERLKYG-IMDNLVRFSFGV--------EDFEDLKADVLQALH 539 (541)
Q Consensus 482 avS~G~~~sl~~~pa~~~~~~~~~~~~~~~g-i~~~~IRlSvG~--------Ed~edli~dL~~AL~ 539 (541)
-++. +..|... .| .....|||++.. ++.+.+.+.|.++++
T Consensus 396 ~vn~------i~~Ptvp------------~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 396 VTNR------NSIPSDP------------NGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLS 444 (493)
T ss_pred EEcc------ccCCCCC------------CCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHH
Confidence 4442 1123210 00 124679999764 455666666665554
No 249
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.73 E-value=2.3e-15 Score=160.91 Aligned_cols=287 Identities=14% Similarity=0.156 Sum_probs=182.2
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc--------cCCCEEEEcCCCCcchHHHHHhhccc-----
Q 009172 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETVLPK----- 272 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all--------~~GD~VIv~~~~y~~~~~~~~~~l~~----- 272 (541)
.+.++...+|+++|+++.+.+.+++++||++|+..+++... ....+|+..+..|++.......+-..
T Consensus 77 ~~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~ 156 (406)
T PRK12381 77 GYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQ 156 (406)
T ss_pred ccCCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCccccc
Confidence 45678888999999999887889999999999999987531 13468888888888854222111100
Q ss_pred -C---CcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCccc-----CHHHHHHHHHhCCCEEEEEcCCCCC-Ccc-
Q 009172 273 -M---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATP-LNQ- 341 (541)
Q Consensus 273 -~---Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~-----di~~Ia~la~~~gillvvDea~a~~-~~~- 341 (541)
+ -..+..++..|++++++.+++ ++++|++| |.|++|-+. .+++|.++|++||+++|+||++... ...
T Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~ 234 (406)
T PRK12381 157 DFAPLPPDIRHAAYNDLNSASALIDD-QTCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGE 234 (406)
T ss_pred CCCCCCCCeeEeCCCCHHHHHHhccC-CeeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcc
Confidence 0 012344566789999999976 59999996 777887543 2789999999999999999997322 111
Q ss_pred ----cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHHH
Q 009172 342 ----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNS 415 (541)
Q Consensus 342 ----~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~--r~~~~~~ 415 (541)
.......|+ .+++|.++++ ...|++++++++++.+...........+|..+..+...++.+.. ..++..+
T Consensus 235 ~~~~~~~~v~pDi--~t~sK~l~gG--~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~ 310 (406)
T PRK12381 235 LYAYMHYGVTPDV--LTTAKALGGG--FPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQ 310 (406)
T ss_pred hhhhHhhCCCCCE--EEehhhhhCC--CceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 111223455 4789999853 46788889988888775432222223466666666665655432 2344455
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-HHHHHHHHHcCCCceeecCCCcccceec
Q 009172 416 TALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-TATIKFIDALKIPYIAPSFGGCESIVDQ 494 (541)
Q Consensus 416 na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~-~~~~~~l~~L~~~~iavS~G~~~sl~~~ 494 (541)
+.+++.+.|++... .++.. .+.++.|.+++++++.+. .....+.+.+...++.+...
T Consensus 311 ~~~~l~~~L~~l~~----~~~~~----------~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~-------- 368 (406)
T PRK12381 311 RHDWFVERLNTINA----RYGLF----------SEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA-------- 368 (406)
T ss_pred HHHHHHHHHHHHHh----hCCCE----------EEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC--------
Confidence 56666666655310 01100 112456788999986431 24556666665555443210
Q ss_pred CcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009172 495 PAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 495 pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~ 539 (541)
.++.|||++.+ ++.++.++.|+++|.
T Consensus 369 -------------------g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~ 398 (406)
T PRK12381 369 -------------------GPNVVRFAPALNISEEEITTGLDRFARACE 398 (406)
T ss_pred -------------------CCCEEEEeCCccCCHHHHHHHHHHHHHHHH
Confidence 13579998875 344555566666654
No 250
>PLN02624 ornithine-delta-aminotransferase
Probab=99.73 E-value=1.9e-15 Score=164.38 Aligned_cols=293 Identities=14% Similarity=0.189 Sum_probs=180.6
Q ss_pred CCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc---------CCC-EEEEcCCCCcchHHHHHhhc---
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP---------AGG-HIVTTTDCYRKTRIFIETVL--- 270 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~---------~GD-~VIv~~~~y~~~~~~~~~~l--- 270 (541)
..++.++...+|+++|+++.+.+.+++++||++|+..++..... ++. .|+.....|++.....-.+-
T Consensus 111 ~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~ 190 (474)
T PLN02624 111 SRAFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDN 190 (474)
T ss_pred ccccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCc
Confidence 34567888999999999999888899999999999999863221 133 57777777877421111110
Q ss_pred ---ccC---CcEEEEeCCCCHHHHHHhccC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCC
Q 009172 271 ---PKM---GITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP 338 (541)
Q Consensus 271 ---~~~---Gi~v~~vd~~dle~Le~ai~~--~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~ 338 (541)
..+ ...+.+++..|++.+++.++. +++++|++|+++|++|.++| +++|.++|++||+++|+||++...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~ 270 (474)
T PLN02624 191 EATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGL 270 (474)
T ss_pred cccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc
Confidence 001 112445667789999998852 35899999999999999988 999999999999999999997631
Q ss_pred -Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HH
Q 009172 339 -LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RV 410 (541)
Q Consensus 339 -~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~--r~ 410 (541)
.. .+......|+++ ++|.+++++ ...|++++++++++.+...........++..+..+...++.+.. ..
T Consensus 271 GrtG~~~a~~~~~i~pDiv~--lsK~lggG~-~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~ 347 (474)
T PLN02624 271 ARTGKMLACDWEEVRPDVVI--LGKALGGGV-IPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLA 347 (474)
T ss_pred CcCcchhhHHhcCCCCCEEE--ecccccCCC-CcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHH
Confidence 11 111223457776 579998654 23577777877776654332211113456666666666665432 12
Q ss_pred HHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---HHHHHHHHHHcCCCceeecCCC
Q 009172 411 QQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD---LTATIKFIDALKIPYIAPSFGG 487 (541)
Q Consensus 411 ~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~---~~~~~~~l~~L~~~~iavS~G~ 487 (541)
++..+....+.+.|++... .+|.. -...++.|.++.|+++.. ...+..+.+.|...++.+..+
T Consensus 348 ~~~~~~~~~l~~~L~~l~~----~~~~~---------i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~- 413 (474)
T PLN02624 348 ERSAKLGQELRDQLQKIQK----QFPKL---------IKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPT- 413 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH----hCCCc---------eEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecC-
Confidence 2223333444444443110 01100 011134677888888532 234566777765555443321
Q ss_pred cccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009172 488 CESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 488 ~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~ 539 (541)
..+.|||+..+ ++.+++++.|+++|.
T Consensus 414 --------------------------~~~~lR~~p~l~~t~e~id~~l~~L~~~l~ 443 (474)
T PLN02624 414 --------------------------HDTIIRLAPPLSISEDELQECSKALSDVLE 443 (474)
T ss_pred --------------------------CCCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 24679998654 445555666655554
No 251
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=4.3e-15 Score=154.57 Aligned_cols=215 Identities=18% Similarity=0.226 Sum_probs=164.0
Q ss_pred hhHHHHHHHHHHHhCCC--cE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC----
Q 009172 210 PTTVVVEEKMSALEGAE--ST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP---- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~--~~-i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~---- 282 (541)
....++.+.|..+++.+ ++ ++.+||+.++++++..+++|||+|++......+.+ +.++++++|.+++.++.
T Consensus 38 ~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R--~~~ia~~~g~~v~~~~~~wg~ 115 (383)
T COG0075 38 GIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGER--FAEIAERYGAEVVVLEVEWGE 115 (383)
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHH--HHHHHHHhCCceEEEeCCCCC
Confidence 35667788888888875 44 45588999999999999999999999887766633 66788999999888864
Q ss_pred -CCHHHHHHhccCC-CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCC-CCcccccccCCcEEEECCcccc
Q 009172 283 -ADMEGLEAALNNN-NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFI 359 (541)
Q Consensus 283 -~dle~Le~ai~~~-~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~-~~~~~~l~~gaDivv~S~sK~l 359 (541)
.|+++++++|+.+ ..++|.+.+.-.+||...|+++|+++|++||+++|||.+-+. ....++.++|+|+++.+..|.+
T Consensus 116 ~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l 195 (383)
T COG0075 116 AVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKAL 195 (383)
T ss_pred CCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhc
Confidence 4899999999833 478888877777899999999999999999999999999653 4567888999999999999999
Q ss_pred CCCCCceEEEEEeChHHHHHHHH------------Hhhhc---C---CCccHHHHHHHHHhHHH-----HHHHHHHHHHH
Q 009172 360 GGHNDVLAGSISGSGKLVTQIRN------------LHHVL---G---GALNPNAAYLIIRGMKT-----LHLRVQQQNST 416 (541)
Q Consensus 360 gg~g~v~gG~vv~~~~li~~l~~------------~~~~~---g---~~~s~~~a~l~l~~l~t-----l~~r~~~~~~n 416 (541)
+++.+ .|++..+++.++.+.. +...+ + .+++....+.+..+++. ++.|.++|.++
T Consensus 196 ~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~ 273 (383)
T COG0075 196 GAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRL 273 (383)
T ss_pred cCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 97763 5777777765554431 11111 1 23333333333333332 57788999999
Q ss_pred HHHHHHHHHhCC
Q 009172 417 ALRMAEILEAHP 428 (541)
Q Consensus 417 a~~la~~L~~~p 428 (541)
+..+.+.+++..
T Consensus 274 ~~a~r~~~~alG 285 (383)
T COG0075 274 AEALRAGLEALG 285 (383)
T ss_pred HHHHHHHHHHcC
Confidence 999999998753
No 252
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.72 E-value=3.3e-15 Score=162.12 Aligned_cols=216 Identities=16% Similarity=0.089 Sum_probs=140.6
Q ss_pred CchhHHHHHH----HHHHHhCCC-cEEEe----CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHH--HHhh--cccCC
Q 009172 208 GNPTTVVVEE----KMSALEGAE-STVIM----ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIF--IETV--LPKMG 274 (541)
Q Consensus 208 ~~p~~~~Le~----~LA~l~g~~-~~i~~----sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~--~~~~--l~~~G 274 (541)
++...+++|+ +..++++++ ..+++ .||+.|+..++.++++|||+|+..+..+++.... .... +...+
T Consensus 74 G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~ 153 (475)
T PLN03226 74 GNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATS 153 (475)
T ss_pred CChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccce
Confidence 4556777765 455566764 45545 8999999999999999999999966544443211 1011 11122
Q ss_pred cEEE--EeCCC------CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc-----
Q 009172 275 ITAT--VIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ----- 341 (541)
Q Consensus 275 i~v~--~vd~~------dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~----- 341 (541)
..+. .+..+ |+++|++++...++++|++ ..++ ++...|+++|.++|+++|+++++|+++..++..
T Consensus 154 ~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~-~~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~ 231 (475)
T PLN03226 154 IYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIA-GASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAA 231 (475)
T ss_pred EEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEE-ecCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC
Confidence 2211 22222 8999999887545787766 3333 788899999999999999999999997765431
Q ss_pred cccccCCcEEEECCccccCCCCCceEEEEEeChHHH-----------H---HHHHH-hhhcCCCccHHHHHHHHHhHHHH
Q 009172 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLV-----------T---QIRNL-HHVLGGALNPNAAYLIIRGMKTL 406 (541)
Q Consensus 342 ~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li-----------~---~l~~~-~~~~g~~~s~~~a~l~l~~l~tl 406 (541)
.++. ++|+++.|+||++.|+. ||+++++++++ + .+... ...+.+.+++...+.+..+++.+
T Consensus 232 ~p~~-~~Div~~t~hK~L~GP~---Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i 307 (475)
T PLN03226 232 SPFE-YCDVVTTTTHKSLRGPR---GGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA 307 (475)
T ss_pred CCCC-CCeEEEecCcccccCCC---ceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH
Confidence 2333 69999999999996654 67788776543 1 12111 11233344554444444455543
Q ss_pred -----HHHHHHHHHHHHHHHHHHHhCCCc
Q 009172 407 -----HLRVQQQNSTALRMAEILEAHPKV 430 (541)
Q Consensus 407 -----~~r~~~~~~na~~la~~L~~~p~v 430 (541)
....++..+|++++++.|.+. ++
T Consensus 308 ~~~~~~~~~~~~~~na~~L~~~L~~~-G~ 335 (475)
T PLN03226 308 MTPEFKAYQKQVKANAAALANRLMSK-GY 335 (475)
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 335677789999999999873 44
No 253
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.72 E-value=1.1e-15 Score=160.53 Aligned_cols=277 Identities=12% Similarity=0.067 Sum_probs=174.7
Q ss_pred hhHHHHHHHHHHHhCC--C-cEEEeCC-HHHHHHHHHHHhcc---CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 210 PTTVVVEEKMSALEGA--E-STVIMAS-GMSASTVMLLALVP---AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~--~-~~i~~sS-G~~Ai~~al~all~---~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
...++.|+.+++++|+ + +++++++ |++++++++..+++ +||+|++. .|+ .-+..++++.|+++++++.
T Consensus 44 ~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g--~~~---~~~~~~a~~~g~~~~~~~~ 118 (355)
T cd00611 44 AIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTG--AWS---AKAAKEAKRYGGVVVIVAA 118 (355)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECC--HHH---HHHHHHHHhcCCCcEEEec
Confidence 5577889999999996 2 3556555 78999999999987 66677652 121 1112355777888887764
Q ss_pred C------C-HHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEEC
Q 009172 283 A------D-MEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHS 354 (541)
Q Consensus 283 ~------d-le~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~S 354 (541)
. + ++..+..+++ ++++|.+.+..|.||...+ ++++.+|++++||.+++.+. +.+..+++ +++.|
T Consensus 119 ~~~g~~~~~~~~~~~~~~~-~~~lV~~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss 190 (355)
T cd00611 119 KEEGKYTKIPDVETWDLAP-DAAYVHYCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSKFG--VIYAG 190 (355)
T ss_pred ccccCCCCCCCHhhcCCCC-CCCEEEEeCCcccccEEcc-----eecccCCCeEEEEccccccCCCCCHHHhC--EEEee
Confidence 2 3 3333344555 5999999999999999743 45566999999999977653 44544544 56677
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHH-------h---h--hcCCCccHHHHHHHHHhHHHH------HHHHHHHHHH
Q 009172 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNL-------H---H--VLGGALNPNAAYLIIRGMKTL------HLRVQQQNST 416 (541)
Q Consensus 355 ~sK~lgg~g~v~gG~vv~~~~li~~l~~~-------~---~--~~g~~~s~~~a~l~l~~l~tl------~~r~~~~~~n 416 (541)
.+|.+|++| .|+++.++++++++... . . ..-++++....+.+..+++.+ +.+.++..+.
T Consensus 191 ~~K~lGP~G---~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l 267 (355)
T cd00611 191 AQKNLGPAG---VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQK 267 (355)
T ss_pred cccccCCCc---eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999887 68888888877654421 0 0 012234433444444455443 3345566677
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCc
Q 009172 417 ALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPA 496 (541)
Q Consensus 417 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa 496 (541)
++++.++|++.|++ |.... .+. ...+.+++|.+++. .....+++.+...|+....|
T Consensus 268 ~~~l~~~l~~~~gl----~~~~~-~~~--------~rs~~vvsf~~~~~-~l~~~~~~~~~r~G~~~~~~---------- 323 (355)
T cd00611 268 AQLLYDTIDNSNGF----YRGPV-DKR--------ARSRMNVPFRLGKE-ELEKEFLKEAEAAGMIGLKG---------- 323 (355)
T ss_pred HHHHHHHHHhCccc----cccCC-CHH--------HcCceEEEEEcCCh-hhhHHHHHHHHHCCCcccCC----------
Confidence 88888888887653 21111 111 01345799998752 11133333332233221111
Q ss_pred ccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 497 IMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 497 ~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
| + ..+.||+|++..++++.|+.|.++|+++
T Consensus 324 ---~-----------~-~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 324 ---H-----------R-SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ---C-----------c-ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 1 0 1368999999999999999999998753
No 254
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.72 E-value=2e-15 Score=174.02 Aligned_cols=166 Identities=15% Similarity=0.164 Sum_probs=135.1
Q ss_pred hHHHHHHHHHHHhCCCcEEEeCCHH----HHHHHHHHHhccC-CC----EEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 211 TTVVVEEKMSALEGAESTVIMASGM----SASTVMLLALVPA-GG----HIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~~~i~~sSG~----~Ai~~al~all~~-GD----~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...++|+.|++++|.+.+++..+.+ +|++++++++.++ || +||++...|+.....+. ..|+++++++
T Consensus 569 ~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~----~~G~~vv~v~ 644 (993)
T PLN02414 569 MFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA----MCGMKIVVVG 644 (993)
T ss_pred HHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH----HCCCEEEEec
Confidence 4568899999999997777776665 6999999999877 88 89999999999775543 2588988887
Q ss_pred CC-----CHHHHHHhccC--CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC--cccccccCCcEEE
Q 009172 282 PA-----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL--NQKALSLGADLVL 352 (541)
Q Consensus 282 ~~-----dle~Le~ai~~--~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~--~~~~l~~gaDivv 352 (541)
.+ |+++|++++++ ++|++|++.+|+|.+|...|+++|+++||++|+++++|.++.... ...|.++|+|+++
T Consensus 645 ~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~ 724 (993)
T PLN02414 645 TDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCH 724 (993)
T ss_pred cCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEE
Confidence 53 89999999985 258999999999999999999999999999999999999975433 3567789999999
Q ss_pred ECCccccCCC-C--CceEEEEEeChHHHHHH
Q 009172 353 HSATKFIGGH-N--DVLAGSISGSGKLVTQI 380 (541)
Q Consensus 353 ~S~sK~lgg~-g--~v~gG~vv~~~~li~~l 380 (541)
+|.||+|+++ | .-..|+++.++.+...+
T Consensus 725 ~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~l 755 (993)
T PLN02414 725 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 755 (993)
T ss_pred ecCCccCCcCcccCCCCeeeEEEchhhcccC
Confidence 9999966632 1 22357888887665443
No 255
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.71 E-value=1.5e-15 Score=153.90 Aligned_cols=253 Identities=21% Similarity=0.296 Sum_probs=165.7
Q ss_pred CchhHHHHHHHHHHHhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEc-CCCCcchHHHHH------hhcccCCcEE
Q 009172 208 GNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTT-TDCYRKTRIFIE------TVLPKMGITA 277 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~---~sSG~~Ai~~al~all~~GD~VIv~-~~~y~~~~~~~~------~~l~~~Gi~v 277 (541)
.+..++.|++..|+.+|+|++++ +.||+.||.++|.++++|||+++.. ..-|......+. ..++.+|+.+
T Consensus 52 ~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y 131 (403)
T PF06838_consen 52 DDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKY 131 (403)
T ss_dssp T-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EE
T ss_pred CCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCcee
Confidence 57789999999999999999988 6799999999999999999999864 445665544441 1356789999
Q ss_pred EEeCCC-----CHHHHHHhccCCCeeEEEEeCCC----CCCCcccCHHHHHHHHHh--CCCEEEEEcCCCCCCc-ccccc
Q 009172 278 TVIDPA-----DMEGLEAALNNNNVSLFFTESPT----NPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLN-QKALS 345 (541)
Q Consensus 278 ~~vd~~-----dle~Le~ai~~~~tklV~lesp~----NPtG~v~di~~Ia~la~~--~gillvvDea~a~~~~-~~~l~ 345 (541)
..++.. |.+.+++++++ +||+|++.--- -|...+.+|+++.++.|+ -+++++|||.|+.+.. ..|.+
T Consensus 132 ~~v~L~~dg~~D~~~i~~~~~~-~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~ 210 (403)
T PF06838_consen 132 REVPLTEDGTIDWEAIKKALKP-NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPTE 210 (403)
T ss_dssp EE--B-TTSSB-HHHHHHHHHT-TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGG
T ss_pred EEEeecCCCCcCHHHHHHhhcc-CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCccc
Confidence 988743 79999999997 59999996432 345556667777777776 4799999999999875 67899
Q ss_pred cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh------hhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 009172 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH------HVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALR 419 (541)
Q Consensus 346 ~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~------~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~ 419 (541)
.|+|++..|+-|..||.--..||+++++++++++..... ...|.++.. ......|+--.+.-+.+..+-+..
T Consensus 211 vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~--~R~~~QGlFlAP~vV~eAlKgaif 288 (403)
T PF06838_consen 211 VGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGT--NRLMFQGLFLAPHVVGEALKGAIF 288 (403)
T ss_dssp GT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTT--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcch--HHHHHhHHhhchHHHHHHHHHHHH
Confidence 999999999999999887667999999999999876432 223444432 223345665555556666677777
Q ss_pred HHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC
Q 009172 420 MAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI 478 (541)
Q Consensus 420 la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~ 478 (541)
.+..++++.. +| .|.. +.+..+ -+-+++|. +.+...+|++.++.
T Consensus 289 ~A~~fe~lG~--~v-~P~~-~~~R~D----------iIQai~l~-~~e~l~~FC~~iQ~ 332 (403)
T PF06838_consen 289 AAALFEKLGF--EV-SPKP-DDPRSD----------IIQAIELG-SPEKLIAFCQGIQA 332 (403)
T ss_dssp HHHHHHHTT---EE-ES-T-TS--SS----------S-EEEE-S-SHHHHHHHHHHHHH
T ss_pred HHHHHHHcCC--cC-CCCC-CCCCCc----------eEEEEECC-CHHHHHHHHHHHHh
Confidence 7777777532 12 2221 112111 26788885 57888899988764
No 256
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.70 E-value=3.8e-17 Score=166.28 Aligned_cols=221 Identities=24% Similarity=0.316 Sum_probs=158.0
Q ss_pred CCCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 203 EYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
.|+ .+|...+|++++++++|.+.++++.||+.|+.++++++++|++.||+..+.|......- ......|.++..++.
T Consensus 24 ~Yg--~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~g-a~~~~~G~~~~~l~~ 100 (290)
T PF01212_consen 24 AYG--EDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETG-AIEELSGAKLIPLPS 100 (290)
T ss_dssp CTT--SSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTT-HHHHHTTCEEEEEBE
T ss_pred ccC--CChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccc-hhhHhcCcEEEECCC
Confidence 465 58999999999999999999999999999999999999999999999988764322110 011225777777643
Q ss_pred -----CCHHHHHHhccC-----CCeeEEEEeCCCCCC-CcccC---HHHHHHHHHhCCCEEEEEcCCC------CCCccc
Q 009172 283 -----ADMEGLEAALNN-----NNVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFA------TPLNQK 342 (541)
Q Consensus 283 -----~dle~Le~ai~~-----~~tklV~lesp~NPt-G~v~d---i~~Ia~la~~~gillvvDea~a------~~~~~~ 342 (541)
.++++|++++.. .++++|++|+|+|.. |.+++ +++|.++||+||+.|++|.+-. ......
T Consensus 101 ~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~ 180 (290)
T PF01212_consen 101 DDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLA 180 (290)
T ss_dssp CTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHH
T ss_pred cccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHH
Confidence 378999998864 258999999999874 77776 6688888999999999999921 111122
Q ss_pred ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCcc---HHHH---H--HHHHhHHHHHHHHHHHH
Q 009172 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALN---PNAA---Y--LIIRGMKTLHLRVQQQN 414 (541)
Q Consensus 343 ~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s---~~~a---~--l~l~~l~tl~~r~~~~~ 414 (541)
.+..++|++..|++|.++.++ +++++++++++++.+.++..+|+.+. ...+ | ..+..++....+..+..
T Consensus 181 e~~~~~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~ 257 (290)
T PF01212_consen 181 EIAAGADSVSFGGTKNGGAPG---GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQFAALRALELWLERARHAN 257 (290)
T ss_dssp HHHTTSSEEEEETTSTT-SSS---EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHHHHCHEECSHHHHHCHH
T ss_pred HHhhhCCEEEEEEEccccccc---ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhHHHHHHHHhhHHHHHHHH
Confidence 334689999999999998775 88999999988776666666664332 1122 1 22333333345667777
Q ss_pred HHHHHHHHHHHhCCC
Q 009172 415 STALRMAEILEAHPK 429 (541)
Q Consensus 415 ~na~~la~~L~~~p~ 429 (541)
+++++|++.|+..+.
T Consensus 258 ~~A~~La~~l~~~~~ 272 (290)
T PF01212_consen 258 AMAKRLAAGLEALGG 272 (290)
T ss_dssp HHHHCHHHCHHEECE
T ss_pred HHHHHHHHHHHHCCC
Confidence 889999998887654
No 257
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.70 E-value=7.3e-15 Score=153.81 Aligned_cols=286 Identities=11% Similarity=0.050 Sum_probs=187.0
Q ss_pred CCCCCCCCCc---hhHHHHHHHHHHHhCC-C--cEEEeCC-HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhccc
Q 009172 200 ASFEYGRYGN---PTTVVVEEKMSALEGA-E--STVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 200 ~~~~Y~R~~~---p~~~~Le~~LA~l~g~-~--~~i~~sS-G~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~ 272 (541)
+.+..+.... ...+++++.|+++++. + +++++++ |+.|+++++..++++||++++....+.+.+ +...+++
T Consensus 24 ~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r--~~~~a~~ 101 (349)
T TIGR01364 24 SVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKK--AAKEAKK 101 (349)
T ss_pred cccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHH
Confidence 3444444444 5677889999999995 2 3666644 889999999999999999887766655533 3466777
Q ss_pred CCcEEEEeC---------CCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-Cccc
Q 009172 273 MGITATVID---------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQK 342 (541)
Q Consensus 273 ~Gi~v~~vd---------~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~-~~~~ 342 (541)
+|+ +..+. ..++++++ +++ ++++|.+.+-.|.||...+ ++++.++++++||.+++.+ .+.+
T Consensus 102 ~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id 172 (349)
T TIGR01364 102 YGV-VNVVASGKEGNYTKIPDPSTWE--ISE-DAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPID 172 (349)
T ss_pred hCC-cEEEeccccCCCCCCCCHHhcC--CCC-CCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccCC
Confidence 887 44433 22445444 344 5899999888899999876 6777789999999997654 3344
Q ss_pred ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-------h-----hhcCCCccHHHHHHHHHhHHH-----
Q 009172 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------H-----HVLGGALNPNAAYLIIRGMKT----- 405 (541)
Q Consensus 343 ~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~-------~-----~~~g~~~s~~~a~l~l~~l~t----- 405 (541)
..+ .|++++|.+|.+|++| .|+++.++++++++... . ....++++....+.+..+++.
T Consensus 173 ~~~--~d~~~~ssqK~lgP~G---lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~g 247 (349)
T TIGR01364 173 VSK--FGLIYAGAQKNIGPAG---LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQG 247 (349)
T ss_pred HHH--ccEEEEecccccCCCc---eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcC
Confidence 444 3599999999999887 68888888887665321 1 011123443344444444443
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeec
Q 009172 406 -LHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPS 484 (541)
Q Consensus 406 -l~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS 484 (541)
++.+.+++.+.++++.++|++.+++ +.+.. .|.. ..+.+++|.+++. ....++++.+...|+++.
T Consensus 248 G~e~i~~r~~~l~~~l~~~l~~~~gl---~~~~~--~~~~--------rs~~v~sf~~~~~-~~~~~~~~~~~~~Gi~~~ 313 (349)
T TIGR01364 248 GVKAIEKRNQAKAQLLYDTIDNSNGF---YRNPV--DPRN--------RSRMNVVFTLGNE-ELEKRFLKEAEERGLVSL 313 (349)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCe---eccCC--CHHH--------cCCeEEEEecCCh-hHhHHHHHHHHHCCCccc
Confidence 4455566778888888889887652 11111 1111 1345789998753 122455555544454322
Q ss_pred CCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 485 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 485 ~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
.|.. ..+.||+|++.+++++.|+.|.++|++
T Consensus 314 ~~~~-------------------------~~g~vRvS~~~~nt~edid~l~~al~~ 344 (349)
T TIGR01364 314 KGHR-------------------------SVGGMRASIYNAMPLEGVQALVDFMKE 344 (349)
T ss_pred CCcc-------------------------ccCeeEEECcCCCCHHHHHHHHHHHHH
Confidence 2210 136899999998888888888888765
No 258
>PLN00144 acetylornithine transaminase
Probab=99.70 E-value=5.8e-15 Score=156.47 Aligned_cols=283 Identities=16% Similarity=0.176 Sum_probs=177.0
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc---c------C------CCEEEEcCCCCcchHHHHHhhcc
Q 009172 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV---P------A------GGHIVTTTDCYRKTRIFIETVLP 271 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all---~------~------GD~VIv~~~~y~~~~~~~~~~l~ 271 (541)
+.++...+|.++|+++.+.+.+++++||++|+..+++... . + ..+||.....|++........-.
T Consensus 54 ~~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~ 133 (382)
T PLN00144 54 YHTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTS 133 (382)
T ss_pred ccCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCC
Confidence 4577788999999988776788999999999999887431 1 0 25788888888884322111100
Q ss_pred ------cC---CcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCC
Q 009172 272 ------KM---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP 338 (541)
Q Consensus 272 ------~~---Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~ 338 (541)
.+ -..+.+++..|++++++.+..+++++|++|..+||.|...+ +++|.++|++||+++|+||++...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~ 213 (382)
T PLN00144 134 KEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGL 213 (382)
T ss_pred CccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 00 11245566778999999886556899999988899555432 779999999999999999996542
Q ss_pred Cc-c-----cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HH
Q 009172 339 LN-Q-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RV 410 (541)
Q Consensus 339 ~~-~-----~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~--r~ 410 (541)
.. . +......| +.+++|.++++ ...|++++++++.+.+...........+|..+.+++..++.+.. ..
T Consensus 214 gr~g~~~~~~~~~~~PD--i~t~sK~l~~G--~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~ 289 (382)
T PLN00144 214 GRTGYLWAHEAYGVEPD--IMTLAKPLAGG--LPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFL 289 (382)
T ss_pred CccchHhhhhhcCCCCC--EEEecccccCC--cceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHH
Confidence 11 1 11223356 55689999865 46788999988888765432222334567777666655554421 11
Q ss_pred HHHHHHHHHHHH----HHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCC
Q 009172 411 QQQNSTALRMAE----ILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 411 ~~~~~na~~la~----~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G 486 (541)
++..+..+++.+ .+.++|.+..| +|.|.++++++.. ....+...+...++.+..+
T Consensus 290 ~~~~~~g~~l~~~l~~~~~~~~~~~~v------------------rg~G~~~~l~l~~---~~~~~~~~~~~~Gv~i~~~ 348 (382)
T PLN00144 290 ASVAKKGEYLRELLRRKLGGNPHVKEV------------------RGVGLLVGIQLDV---PAGPLVDACRDSGLLVLTA 348 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceee------------------ecCceEEEEEecC---ccHHHHHHHHHCCeEEeec
Confidence 222222223333 33333332222 3468899999942 2345666655555443321
Q ss_pred CcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009172 487 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 487 ~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~~ 540 (541)
+ ..+.|||+.+. ++.+..++.|.++|.+
T Consensus 349 -------------------------~-~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 349 -------------------------G-KGDVVRLVPPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred -------------------------C-CCCEEEEeCCCccCHHHHHHHHHHHHHHHHh
Confidence 0 13689999987 3445555666666653
No 259
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.69 E-value=2.3e-15 Score=152.44 Aligned_cols=280 Identities=18% Similarity=0.214 Sum_probs=196.7
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHH
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle 286 (541)
+-...+||+.||++.+.+.+++|+|..-|+...|..| .-||-+|......|.+...- .+..+++-..+..+|++
T Consensus 215 s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~G----Irns~v~K~IFrHND~~ 290 (570)
T KOG1360|consen 215 SKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQG----IRNSRVPKHIFRHNDLD 290 (570)
T ss_pred CchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHH----hhhcCCcceeeccCCHH
Confidence 4567899999999999999999999998888887766 34788888877777765433 34446665567788999
Q ss_pred HHHHhccCC---CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc---------cccccCCcEEEEC
Q 009172 287 GLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ---------KALSLGADLVLHS 354 (541)
Q Consensus 287 ~Le~ai~~~---~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~---------~~l~~gaDivv~S 354 (541)
+|+++++.. .+|+|-+|+.++.+|.+.|+++|.+++|+||++..+||+++.++.. +..-...||+..+
T Consensus 291 hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGT 370 (570)
T KOG1360|consen 291 HLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGT 370 (570)
T ss_pred HHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccc
Confidence 999988632 4799999999999999999999999999999999999997655431 1122346999999
Q ss_pred CccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHHH-----HHHHHHHHHHHHHHHHHHhC
Q 009172 355 ATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTLH-----LRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 355 ~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~--~~g~~~s~~~a~l~l~~l~tl~-----~r~~~~~~na~~la~~L~~~ 427 (541)
+.|.||. +|||+.+...+++.+|.+.. .+.+.++|....-++..++.+. ...+++++|..++.+.|.+.
T Consensus 371 LgKafGc----VGGYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~ 446 (570)
T KOG1360|consen 371 LGKAFGC----VGGYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL 446 (570)
T ss_pred hhhhccc----ccceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 9999995 47999999999999997654 4566777766555555544432 12345667888888888764
Q ss_pred CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHH----HcCCCceeecCCCcccceecCcccccccC
Q 009172 428 PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID----ALKIPYIAPSFGGCESIVDQPAIMSYWDL 503 (541)
Q Consensus 428 p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~----~L~~~~iavS~G~~~sl~~~pa~~~~~~~ 503 (541)
..|-++ .| ..++-+.+. +.....+..+ ...+..-+++ .|...
T Consensus 447 ------GiPVi~-~p------------SHIiPv~vg-da~l~~~~sd~Li~~h~iYvQaIN---------yPTV~----- 492 (570)
T KOG1360|consen 447 ------GIPVIP-NP------------SHIIPVRVG-DAALAKQASDILISKHNIYVQAIN---------YPTVA----- 492 (570)
T ss_pred ------CCcccC-CC------------cceeeeecc-CHHHHHHHHHHHHHhcCeEEEecc---------CCccc-----
Confidence 223221 22 237777774 4344444333 3332222222 23210
Q ss_pred CHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 504 SQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 504 ~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
.....+||.-...++.++.++|.++|.
T Consensus 493 ---------rG~E~LRiaPTP~HT~~mm~~lv~~l~ 519 (570)
T KOG1360|consen 493 ---------RGTERLRIAPTPHHTPQMMNILVNALL 519 (570)
T ss_pred ---------ccceeeecCCCCCCCHHHHHHHHHHHH
Confidence 134578988887777777777776664
No 260
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.69 E-value=1.4e-14 Score=147.62 Aligned_cols=279 Identities=19% Similarity=0.212 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHhC----C------CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 212 TVVVEEKMSALEG----A------ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 212 ~~~Le~~LA~l~g----~------~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+++++|++.+ . +..+++++++.|++++...|..|||..+++.|-|++.-+ .+-=+.|++++.+.
T Consensus 123 l~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdr---dl~~rTgveivpv~ 199 (471)
T KOG0256|consen 123 LPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVEIVPVH 199 (471)
T ss_pred chHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccc---cceeccCceEEEEE
Confidence 4467777887652 2 356666667799999999999999999999999999532 22234588888775
Q ss_pred C-------CCHHHHHHhccC-----CCeeEEEEeCCCCCCCcccCHH---HHHHHHHhCCCEEEEEcCCCCCCcccc---
Q 009172 282 P-------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATPLNQKA--- 343 (541)
Q Consensus 282 ~-------~dle~Le~ai~~-----~~tklV~lesp~NPtG~v~di~---~Ia~la~~~gillvvDea~a~~~~~~~--- 343 (541)
. .+.+++|+++.+ .++|.|++.+|+||.|.+.+-+ .+.+.|.++++.||+||+|+..++..+
T Consensus 200 c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~ 279 (471)
T KOG0256|consen 200 CSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFR 279 (471)
T ss_pred eecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCce
Confidence 3 257888877642 2699999999999999999855 555667799999999999876443211
Q ss_pred --c--------ccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhhhcCCCccHHHHHHHHHhHHH-------
Q 009172 344 --L--------SLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHHVLGGALNPNAAYLIIRGMKT------- 405 (541)
Q Consensus 344 --l--------~~gaDivv~S~sK~lgg~g~v~gG~vv~~~-~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t------- 405 (541)
+ .....-++.|+||-+|-+|- ..|+++... .+....+++. .+|.. ++...+++..-|..
T Consensus 280 Sv~ev~~~~~~~~~rvHivyslSKD~GlpGf-RvGviYS~ne~VvsaA~kms-sf~~v-Ss~tQ~~la~LLSD~~f~~~y 356 (471)
T KOG0256|consen 280 SVLEVRKDPHLDPDRVHIVYSLSKDFGLPGF-RVGVIYSNNEDVVSAATKMS-SFGLV-SSQTQYLLASLLSDEEFTREY 356 (471)
T ss_pred EHHHHhhccccCCCcEEEEEEeccccCCCce-EEEEEEecChHHHHHHHHHh-hccCC-cHHHHHHHHHHhchHHHHHHH
Confidence 1 11223578999999998874 467777654 4555555443 34443 44444443333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-----C----HHHHHHHHHHc
Q 009172 406 LHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-----D----LTATIKFIDAL 476 (541)
Q Consensus 406 l~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g-----~----~~~~~~~l~~L 476 (541)
+....+|+...-.++.+.|++ ...|.+++ +.|-++|+++.. + .+--++++++.
T Consensus 357 l~en~~Rl~~rh~~~~~gLk~------lgI~cl~s------------~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~v 418 (471)
T KOG0256|consen 357 LRENNKRLRIRHRYIVEGLKA------LGIPCLKS------------NAGLFCWVDLRKLLTSLTFEGELELWERILDNV 418 (471)
T ss_pred HHHHHHHHHHHHHHHHhhHHh------cCCceeec------------CCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhh
Confidence 111222223333444555554 33455443 256677888741 1 12234455554
Q ss_pred CCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHH---HHHHHHHHH
Q 009172 477 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFED---LKADVLQAL 538 (541)
Q Consensus 477 ~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~ed---li~dL~~AL 538 (541)
+ +-+|.|..+ |.. .+|+.|+.+.-...+. ..++|.+.+
T Consensus 419 k---lnlSpG~s~----------~C~-----------EpGWFRvcFAn~~~~t~~~am~Ri~~~~ 459 (471)
T KOG0256|consen 419 K---LNLSPGSSC----------HCH-----------EPGWFRVCFANMSEETLEVAMRRLKQFL 459 (471)
T ss_pred c---cccCCCCcc----------eec-----------CCCeEEEEeccCCHHHHHHHHHHHHHHH
Confidence 4 456666431 211 3699999998644333 334444443
No 261
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.69 E-value=6.6e-15 Score=157.52 Aligned_cols=212 Identities=15% Similarity=0.152 Sum_probs=154.7
Q ss_pred hhHHHHHHHHHHHhCCC---cEEEeCCHH-HHHHHHHHHhc--c-CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC
Q 009172 210 PTTVVVEEKMSALEGAE---STVIMASGM-SASTVMLLALV--P-AGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~---~~i~~sSG~-~Ai~~al~all--~-~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~ 282 (541)
-...++++.++++.|.+ .++++++|+ .++.+++.++- + +||+||++...|.++.. .+...|+++++++.
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~k----Ai~~~G~~pv~Vd~ 180 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIK----AISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHH----HHHHcCCeEEEeee
Confidence 35678899999999987 689999999 68888877763 2 58999999999888764 34456777777773
Q ss_pred --------CCHHHHHHhccCC--CeeEEEEeCCC-CCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc------cccc
Q 009172 283 --------ADMEGLEAALNNN--NVSLFFTESPT-NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALS 345 (541)
Q Consensus 283 --------~dle~Le~ai~~~--~tklV~lesp~-NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~------~~l~ 345 (541)
.|+++|+++|++. ++.++++.+|+ .+.|.+.|+++|+++|++||+++|+|++|+..... ....
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~ 260 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIK 260 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcccc
Confidence 2799999999752 35666666665 45568899999999999999999999999864322 2233
Q ss_pred cC-CcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHHHhhhcCCCccHHHHHHH--HHhHHHHHHHHHHHHHHHHHHH
Q 009172 346 LG-ADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRNLHHVLGGALNPNAAYLI--IRGMKTLHLRVQQQNSTALRMA 421 (541)
Q Consensus 346 ~g-aDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~~~~~~g~~~s~~~a~l~--l~~l~tl~~r~~~~~~na~~la 421 (541)
.| +|++++|+||++..+++ ||+++. ++++.+.++..............+|+. ..+.+.+...+++..++++++.
T Consensus 261 ~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~ 338 (444)
T TIGR03531 261 VGRVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLK 338 (444)
T ss_pred ccCCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 44 69999999999987653 677766 677877776543211111122334433 3355777778888888888888
Q ss_pred HHHHhC
Q 009172 422 EILEAH 427 (541)
Q Consensus 422 ~~L~~~ 427 (541)
+.|++.
T Consensus 339 ~~L~~l 344 (444)
T TIGR03531 339 ELLQKL 344 (444)
T ss_pred HHHHHH
Confidence 888764
No 262
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.68 E-value=1.6e-14 Score=152.68 Aligned_cols=277 Identities=14% Similarity=0.103 Sum_probs=168.9
Q ss_pred hhHHHHHHHHHHHhCC--C-cEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchH-HHHHhh-----cccCCc---
Q 009172 210 PTTVVVEEKMSALEGA--E-STVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTR-IFIETV-----LPKMGI--- 275 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~--~-~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~-~~~~~~-----l~~~Gi--- 275 (541)
+....+++.+++.+.. . .+++++||++|+..++... ...+++|++.+..|++.. ..+... ...++.
T Consensus 66 ~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~ 145 (375)
T PRK04260 66 LYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVP 145 (375)
T ss_pred ccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCC
Confidence 3445666777765432 2 2578899999999888764 245678998888887632 222110 011111
Q ss_pred EEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCCCc-ccc-----cc
Q 009172 276 TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN-QKA-----LS 345 (541)
Q Consensus 276 ~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~~~-~~~-----l~ 345 (541)
.+.+.+..|++++++++++ ++++|++|+++|++|.+.+ +++|.++|+++|+++|+||++..... ..+ ..
T Consensus 146 ~~~~~~~~dl~~l~~~l~~-~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~ 224 (375)
T PRK04260 146 HFSYAIFNDLNSVKALVNK-NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYG 224 (375)
T ss_pred CeEEeCCCCHHHHHHhcCC-CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhC
Confidence 1333345689999998876 4899999999999998876 89999999999999999999753211 111 11
Q ss_pred cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHH
Q 009172 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH--LRVQQQNSTALRMAEI 423 (541)
Q Consensus 346 ~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~--~r~~~~~~na~~la~~ 423 (541)
...|++ |++|.++++ ...|++++++++.+.+...........++..+..+...++.+. ...++..++.+++.+.
T Consensus 225 ~~pdi~--t~sK~l~~G--~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~ 300 (375)
T PRK04260 225 IEPDIF--TLAKGLANG--VPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQ 300 (375)
T ss_pred CCCCEE--EecccccCC--cceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 234654 799999854 3578899998887766532221122235666666666665432 2233444444444444
Q ss_pred HHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccc
Q 009172 424 LEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMS 499 (541)
Q Consensus 424 L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~ 499 (541)
|.+ ++.+..+ ++.|.+++++++.. ..+|.+.+...++.+..+
T Consensus 301 l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~---~~~~~~~l~~~Gi~v~~~------------- 346 (375)
T PRK04260 301 LQKALQDKETVTTV------------------RGLGYMIGIETTAD---LSQLVEAARDKGLIVLTA------------- 346 (375)
T ss_pred HHHHHhhCCCeeEE------------------eccceEEEEEecCc---HHHHHHHHHhCCCEEecC-------------
Confidence 443 3222111 23578999998532 345666665545433211
Q ss_pred cccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 500 YWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 500 ~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
..+.||++...-.+++.++.+.+.|+
T Consensus 347 --------------~~~~lR~~~~~~~t~~~i~~~l~~l~ 372 (375)
T PRK04260 347 --------------GTNVIRLLPPLTLTKEEIEQGIAILS 372 (375)
T ss_pred --------------CCCEEEEcCCCccCHHHHHHHHHHHH
Confidence 13679999965544555555555554
No 263
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.68 E-value=6e-15 Score=155.10 Aligned_cols=276 Identities=12% Similarity=0.029 Sum_probs=181.0
Q ss_pred hhHHHHHHHHHHHhCC-C--cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC---
Q 009172 210 PTTVVVEEKMSALEGA-E--STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~-~--~~i~~-sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
...+++++.|+++++. + +++++ +||+.|+++++..++.+||++++......+.+ +...++++|.. ..+..
T Consensus 48 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r--~~~~a~~~g~~-~~~~~~~~ 124 (360)
T PRK05355 48 AVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKK--AIKEAKKYGEV-NVAASSED 124 (360)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCc-eEEecccc
Confidence 5778889999999996 3 34444 66779999999999999998877665554432 34567777765 33321
Q ss_pred ---CCHHHHHH-hccCCCeeEEEEeCCCCCCCccc-CHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEEECCc
Q 009172 283 ---ADMEGLEA-ALNNNNVSLFFTESPTNPFLRCV-DVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVLHSAT 356 (541)
Q Consensus 283 ---~dle~Le~-ai~~~~tklV~lesp~NPtG~v~-di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv~S~s 356 (541)
.+..++++ ++++ ++++|++.+-.+.||.+. |+++| +|++++||.+++.+. ..+..++ |++++|.+
T Consensus 125 ~g~~~~~~~~~~~l~~-~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~~--d~~~~ssq 195 (360)
T PRK05355 125 DGFTYIPPLDEWQLSD-DAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQ 195 (360)
T ss_pred cCCCCCCChhhccCCC-CCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHHHc--cEEEEecc
Confidence 12334444 6776 489999988889999998 77766 899999999976543 3444443 69999999
Q ss_pred cccCCCCCceEEEEEeChHHHHHHHHH-h-----------hhcCCCccHHHHHHHHHhHHH------HHHHHHHHHHHHH
Q 009172 357 KFIGGHNDVLAGSISGSGKLVTQIRNL-H-----------HVLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL 418 (541)
Q Consensus 357 K~lgg~g~v~gG~vv~~~~li~~l~~~-~-----------~~~g~~~s~~~a~l~l~~l~t------l~~r~~~~~~na~ 418 (541)
|.+|++| .|+++.++++++++... . ....++++....+.+..+++. ++.+.+++.+.++
T Consensus 196 K~lgP~G---lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~ 272 (360)
T PRK05355 196 KNIGPAG---LTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAA 272 (360)
T ss_pred ccccCCc---eEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 9999877 78899988877665431 1 011234444444444444443 3455667778888
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCccc
Q 009172 419 RMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 419 ~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
++.++|++.+.+. + +. .+.+ ..+.+++|.+++. ....++++.+...|+.+..|
T Consensus 273 ~l~~~l~~~~~~~----~-~~-~~~~--------rs~~v~sf~~~~~-~~~~~~~~~~~~~Gi~~~~~------------ 325 (360)
T PRK05355 273 LLYDAIDSSDFYR----N-PV-APED--------RSRMNVPFTLADE-ELDKKFLAEAKAAGLVGLKG------------ 325 (360)
T ss_pred HHHHHHHhCCCcc----c-CC-Chhh--------cCCcEEEEEcCCh-HHHHHHHHHHHHCCCcccCC------------
Confidence 8888888876211 1 00 1110 1346799998764 22345555544333222111
Q ss_pred ccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 499 SYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
|. ..+.||+|++..++.+.|+.|.++|++
T Consensus 326 -~~------------~~g~vRiS~~~~nt~eei~~l~~~l~~ 354 (360)
T PRK05355 326 -HR------------SVGGMRASIYNAMPLEGVQALVDFMKE 354 (360)
T ss_pred -CC------------ccCcEEEECCCCCCHHHHHHHHHHHHH
Confidence 00 247899999998888888888888765
No 264
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.68 E-value=1.9e-14 Score=154.56 Aligned_cols=285 Identities=16% Similarity=0.167 Sum_probs=176.7
Q ss_pred CCchhHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhh-------c------
Q 009172 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV-------L------ 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~-~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~-------l------ 270 (541)
+.++...+|.++|+++.+. +.+++++||++|+..+++.. ....++||+.++.|++....+... .
T Consensus 85 ~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~ 164 (423)
T TIGR00713 85 APTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSP 164 (423)
T ss_pred CCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCC
Confidence 4567788999999998864 57888899999999988743 234689999999999853222110 0
Q ss_pred ---ccCCcEEEEeCCCCHHHHHHhccC--CCeeEEEEe-CCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCCCc
Q 009172 271 ---PKMGITATVIDPADMEGLEAALNN--NNVSLFFTE-SPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN 340 (541)
Q Consensus 271 ---~~~Gi~v~~vd~~dle~Le~ai~~--~~tklV~le-sp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~~~ 340 (541)
...+..+..++..|+++++++++. +++++|++| .++| +|.+.+ +++|.++|++||+++|+||++.....
T Consensus 165 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~ 243 (423)
T TIGR00713 165 GVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRV 243 (423)
T ss_pred CCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccccc
Confidence 000112334455689999998862 258999998 5666 788876 78999999999999999999753311
Q ss_pred -----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh---hhcCCCccHHHHHHHHHhHHHHHH--HH
Q 009172 341 -----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTLHL--RV 410 (541)
Q Consensus 341 -----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~---~~~g~~~s~~~a~l~l~~l~tl~~--r~ 410 (541)
........|++ +++|.+++ | ..+|++++++++++.+.... .......++..+..++..++.+.. ..
T Consensus 244 g~~~~~~~~~~~pDi~--t~sK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~ 319 (423)
T TIGR00713 244 ALGGAQEYFGVEPDLT--TLGKIIGG-G-LPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVY 319 (423)
T ss_pred CcchhHHHhCCCcchh--hhhhhhcC-C-CceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHH
Confidence 11122234654 69999984 3 45789999999888875321 111123567777666666665432 23
Q ss_pred HHHHHHHHHHHHH----HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------------HHHHHHHHH
Q 009172 411 QQQNSTALRMAEI----LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFID 474 (541)
Q Consensus 411 ~~~~~na~~la~~----L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~------------~~~~~~~l~ 474 (541)
++..+..+++.+. +++++.+..+ ++.|+++.+++..+ ......+.+
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~~v------------------~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (423)
T TIGR00713 320 TELDELAKRLAEGLSEVLEDTGIPHTV------------------NRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFH 381 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEE------------------EeeccEEEEEEecCCCCChhhhhcccHHHHHHHHH
Confidence 3333334444443 3344322222 23567888777421 122345665
Q ss_pred HcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHhhC
Q 009172 475 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV--EDFEDLKADVLQALHAI 541 (541)
Q Consensus 475 ~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~--Ed~edli~dL~~AL~~i 541 (541)
.+...++.+..++ .+.+||+... ++.+++++.|+++|+++
T Consensus 382 ~l~~~Gv~v~~~~---------------------------~~~~~l~~~~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 382 EMLDKGVFLPPSQ---------------------------FEACFLSAAHTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred HHHHCCeEEecCC---------------------------ccceeeECCCCHHHHHHHHHHHHHHHhhC
Confidence 5554454433211 1235666643 45677777888877654
No 265
>PLN02271 serine hydroxymethyltransferase
Probab=99.68 E-value=3.4e-14 Score=153.31 Aligned_cols=252 Identities=19% Similarity=0.163 Sum_probs=163.5
Q ss_pred CCCCCC--CchhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHH---
Q 009172 202 FEYGRY--GNPTTVVVE----EKMSALEGAES-----TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIE--- 267 (541)
Q Consensus 202 ~~Y~R~--~~p~~~~Le----~~LA~l~g~~~-----~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~--- 267 (541)
|.-.|| ++...+++| ++..+++|++. .+-.-||+.|+.+++.++++|||+|+..+..|++......
T Consensus 180 ~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~ 259 (586)
T PLN02271 180 MPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTP 259 (586)
T ss_pred CCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccc
Confidence 333454 445555553 45556778543 3555699999999999999999999999999998653321
Q ss_pred --hhcccCCcEEEEeC--C------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCC
Q 009172 268 --TVLPKMGITATVID--P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 268 --~~l~~~Gi~v~~vd--~------~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~ 337 (541)
......|+.+..++ . .|.+++++.+...++|+|++....+| ...|+++|.++|+++|+++++|.++..
T Consensus 260 ~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~a 337 (586)
T PLN02271 260 GGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHIS 337 (586)
T ss_pred cccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccc
Confidence 11233454443332 2 38899998443346999999777777 778999999999999999999999766
Q ss_pred CCc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChH--------------------HHHHHHHHh--hhcCCC
Q 009172 338 PLN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK--------------------LVTQIRNLH--HVLGGA 390 (541)
Q Consensus 338 ~~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~--------------------li~~l~~~~--~~~g~~ 390 (541)
++. .+|+. ++|+++.|+||++.|+. ||+++.+++ +.+++.... ...|+.
T Consensus 338 GLIa~g~~~sP~~-~aDvvt~TTHKtLrGPr---GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGp 413 (586)
T PLN02271 338 GLVAAKECVNPFD-YCDIVTSTTHKSLRGPR---GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGP 413 (586)
T ss_pred cccccCcCCCCCc-CCcEEEeCCcccCCCCC---ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccCh
Confidence 543 34555 59999999999998885 576666542 344444322 122222
Q ss_pred ccHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-
Q 009172 391 LNPNAAYLIIRGMK-----TLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG- 464 (541)
Q Consensus 391 ~s~~~a~l~l~~l~-----tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g- 464 (541)
.....+.++ .+++ ......++..+|++.|++.|.+.. +. +..-+-.+ .++.+++..
T Consensus 414 hn~~IAalA-valkea~~~efk~Ya~QVv~NAkaLA~~L~~~G-~~-vv~ggTdn---------------HlvLvDl~~~ 475 (586)
T PLN02271 414 HNNHIAALA-IALKQVATPEYKAYMQQVKKNAQALASALLRRK-CR-LVTGGTDN---------------HLLLWDLTTL 475 (586)
T ss_pred hHHHHHHHH-HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCC-Ce-EeeCCCCc---------------ceeeecCccc
Confidence 222222221 2222 345677888899999999998763 32 22223222 367777753
Q ss_pred --CHHHHHHHHHHcC
Q 009172 465 --DLTATIKFIDALK 477 (541)
Q Consensus 465 --~~~~~~~~l~~L~ 477 (541)
+...+++.++...
T Consensus 476 g~~G~~ae~~Le~~~ 490 (586)
T PLN02271 476 GLTGKNYEKVCEMCH 490 (586)
T ss_pred CCCHHHHHHHHHHcC
Confidence 2356666666554
No 266
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.67 E-value=1.5e-15 Score=160.15 Aligned_cols=208 Identities=21% Similarity=0.340 Sum_probs=144.5
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC---
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
+.....+.++..|+++|++.+++.++|+ .++.+++++++++||.|++++.+|.+.+..+ ...|+.++++++.
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~al----il~ga~Pvyi~p~~~~ 139 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNAL----ILSGAIPVYIPPEDNE 139 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHH----HHHTEEEEEEEEEE-T
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHH----HHcCCeEEEecCCccc
Confidence 4557889999999999999999999998 7999999999999999999999999977543 3346777776531
Q ss_pred -------CH-----HHHHHhccCC-Ce---eEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCccc-----
Q 009172 284 -------DM-----EGLEAALNNN-NV---SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK----- 342 (541)
Q Consensus 284 -------dl-----e~Le~ai~~~-~t---klV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~----- 342 (541)
++ +.++++|+++ .. ++|++.+|+ ..|.+.|+++|+++||+++++|+|||+++..+.+.
T Consensus 140 ~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~ 218 (417)
T PF01276_consen 140 YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRS 218 (417)
T ss_dssp TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTT
T ss_pred cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccc
Confidence 34 8888888643 23 449998887 68999999999999999999999999987654333
Q ss_pred ccccCCc-------EEEECCccccCCCCCceEEEEEeChH---HHHHHHHHhhhcCCCccHHHHHHHHHhHHH----H--
Q 009172 343 ALSLGAD-------LVLHSATKFIGGHNDVLAGSISGSGK---LVTQIRNLHHVLGGALNPNAAYLIIRGMKT----L-- 406 (541)
Q Consensus 343 ~l~~gaD-------ivv~S~sK~lgg~g~v~gG~vv~~~~---li~~l~~~~~~~g~~~s~~~a~l~l~~l~t----l-- 406 (541)
....|+| +++.|+||.+++.. .+.++-.+.+ ..++++.....+.++.+. |+++.+++. +
T Consensus 219 a~~~gad~~~~~~~~vvqS~HKtL~alt--Qts~lh~~~~~~v~~~~~~~~l~~~~TTSPS---Y~lmASlD~a~~~m~~ 293 (417)
T PF01276_consen 219 ALALGADRPNDPGIIVVQSTHKTLPALT--QTSMLHVKGDRIVDHERVNEALSMHQTTSPS---YPLMASLDVARAQMEE 293 (417)
T ss_dssp CSSTTSS-CTSBEEEEEEEHHHHSSS-T--T-EEEEEETCCCTTHHHHHHHHHHHS-SS-----HHHHHHHHHHHHHHSH
T ss_pred hhhccCccccccceeeeechhhcccccc--cceEEEecCCCcccHHHHHHHHHHHcCCChH---HHHHHHHHHHHHHHhh
Confidence 3467999 99999999999876 4666665443 246677666555544322 222222221 1
Q ss_pred ---HHHHHHHHHHHHHHHHHHH
Q 009172 407 ---HLRVQQQNSTALRMAEILE 425 (541)
Q Consensus 407 ---~~r~~~~~~na~~la~~L~ 425 (541)
...+++..++++.+.+.++
T Consensus 294 ~~G~~l~~~~i~~a~~~R~~i~ 315 (417)
T PF01276_consen 294 EEGRELLEEAIELAEEFRKKIN 315 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHH
Confidence 1233455566667777773
No 267
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.65 E-value=3.5e-14 Score=151.73 Aligned_cols=290 Identities=17% Similarity=0.136 Sum_probs=177.8
Q ss_pred CCchhHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHhcc----C-----CCEEEEcCCCCcchHHHHHhhc--c--c
Q 009172 207 YGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLALVP----A-----GGHIVTTTDCYRKTRIFIETVL--P--K 272 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~-~~~i~~sSG~~Ai~~al~all~----~-----GD~VIv~~~~y~~~~~~~~~~l--~--~ 272 (541)
+.++...+|.++|.++.+. +.+++++||++|+..+++.... . ..+||.....|++.....-... . +
T Consensus 79 ~~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~ 158 (408)
T PRK04612 79 FYSAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQ 158 (408)
T ss_pred cCCHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccc
Confidence 4567778899999988754 5688889999999999864321 1 2468888888888432211110 0 0
Q ss_pred --C---CcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC-----HHHHHHHHHhCCCEEEEEcCCCCCCc-c
Q 009172 273 --M---GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD-----VKLVSDLCHKKGAIVCIDGTFATPLN-Q 341 (541)
Q Consensus 273 --~---Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d-----i~~Ia~la~~~gillvvDea~a~~~~-~ 341 (541)
+ ...+.+++..|++.++++++++++.+|++| |.+++|.+.+ +++|.++|++||+++|+||++..... .
T Consensus 159 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~e-P~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G 237 (408)
T PRK04612 159 EGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLE-PIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG 237 (408)
T ss_pred cCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEEC-CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC
Confidence 1 112445666789999999975557777775 4555654433 78999999999999999999753211 1
Q ss_pred ---cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--HHHHHHHH
Q 009172 342 ---KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--RVQQQNST 416 (541)
Q Consensus 342 ---~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~--r~~~~~~n 416 (541)
.....+.+..+.+++|.++++ ...|++++++++.+.+...........+|..+.++...|+.+.. ..++..+.
T Consensus 238 ~~~a~~~~~~~pdi~t~~K~l~~G--~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~ 315 (408)
T PRK04612 238 TLFAHWQEQVTPDIVTLAKALGGG--FPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQ 315 (408)
T ss_pred chhhhhhcCCCCCEEEEcchhcCC--CceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 111234555666799999853 34677777777777665432222223467777777777766542 23334444
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCCcccceecC
Q 009172 417 ALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQP 495 (541)
Q Consensus 417 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-~~~~~~~l~~L~~~~iavS~G~~~sl~~~p 495 (541)
.+++.+.|++... .++.. ...+|.|.|+.+++..+ ...+..+.+.+...|+.+...
T Consensus 316 g~~l~~~l~~l~~----~~~~i----------~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~--------- 372 (408)
T PRK04612 316 SAALRAGLEALNA----EFGVF----------AQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQA--------- 372 (408)
T ss_pred HHHHHHHHHHHHh----hCCCe----------eeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeC---------
Confidence 4555555544210 01100 11256788999998532 234566766666555433211
Q ss_pred cccccccCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhh
Q 009172 496 AIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALHA 540 (541)
Q Consensus 496 a~~~~~~~~~~~~~~~gi~~~~IRlSvG----~Ed~edli~dL~~AL~~ 540 (541)
..+.||+... .++.+..++.|+++|.+
T Consensus 373 ------------------g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 373 ------------------GPDVLRFVPALNLTDAELADGLARLRLALAD 403 (408)
T ss_pred ------------------CCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 1356777644 35667777777777754
No 268
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.65 E-value=2.5e-14 Score=150.32 Aligned_cols=277 Identities=16% Similarity=0.110 Sum_probs=176.4
Q ss_pred CCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-ccCC-CEEEEcCCCCcchHHHHHhh---------ccc
Q 009172 204 YGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL-VPAG-GHIVTTTDCYRKTRIFIETV---------LPK 272 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al-l~~G-D~VIv~~~~y~~~~~~~~~~---------l~~ 272 (541)
...+.++...+|+++|+++.+.+.+++++||++|+.++++.. ..+| ++||+.+..|++.....-.. ...
T Consensus 60 ~~~~~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p 139 (364)
T PRK04013 60 GPMFEHEEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEP 139 (364)
T ss_pred cCCcCCHHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCC
Confidence 345778899999999999988788999999999999998754 3345 89999999998853221110 111
Q ss_pred CCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCccc-C---HHHHHHHHHhCCCEEEEEcCCCCC-----Ccccc
Q 009172 273 MGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP-----LNQKA 343 (541)
Q Consensus 273 ~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~-d---i~~Ia~la~~~gillvvDea~a~~-----~~~~~ 343 (541)
.-..+..++..|++.+++.+.+ ++++|++|......|... | +++|.++|++||+++|+||++... +....
T Consensus 140 ~~~~~~~~~~~d~~~l~~~i~~-~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~ 218 (364)
T PRK04013 140 LVPGFKHIPFNDVEAAKEAITK-ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEH 218 (364)
T ss_pred CCCCcEEecCCCHHHHHHHhcC-CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHh
Confidence 1123455666789999999976 599999998887666654 4 889999999999999999996532 11222
Q ss_pred cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 009172 344 LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEI 423 (541)
Q Consensus 344 l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~ 423 (541)
.....|+++ +.|.++++ ...|.++.+.++. ..........+|..+..++..++.+... ...++++.+.+.
T Consensus 219 ~gv~PDiv~--~gK~lggG--~P~~a~~~~~~~~----~~~~~~T~~gnp~~~aaa~a~l~~i~~~--~l~~~~~~~l~~ 288 (364)
T PRK04013 219 YKVEPDIVT--MGKGIGNG--VPVSLTLTNFDVE----RGKHGSTFGGNPLACKAVAVTLRILRRE--RLVEKAGEKFIE 288 (364)
T ss_pred cCCCCCEEE--ecccccCC--ceeEEEEeccccc----CCCcCCCCCcCHHHHHHHHHHHHHHHhc--cHHHHHHHHHHH
Confidence 334467777 68999874 3456666665541 1111112234677777777777665432 233333333221
Q ss_pred HHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccC
Q 009172 424 LEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDL 503 (541)
Q Consensus 424 L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~ 503 (541)
+. .+.|. ..+|.|.|+.+++... ...+.+.+...++-+...+
T Consensus 289 l~-~~~v~------------------~vRG~Gl~~gve~~~~---~~~i~~~~~~~Gll~~~~g---------------- 330 (364)
T PRK04013 289 IK-GERVV------------------TTRGRGLMIGIVLKKP---VGKYVEELQNRGYLVHTAG---------------- 330 (364)
T ss_pred hc-cCcce------------------eeeeCcEEEEEEeCCc---HHHHHHHHHhCCcEEeeCC----------------
Confidence 21 12121 2367889999999642 2345555443443332211
Q ss_pred CHHHHHhcCCCCCeEEEEe----cCCCHHHHHHHHHHHHhh
Q 009172 504 SQSERLKYGIMDNLVRFSF----GVEDFEDLKADVLQALHA 540 (541)
Q Consensus 504 ~~~~~~~~gi~~~~IRlSv----G~Ed~edli~dL~~AL~~ 540 (541)
.+.|||.. ..++.++.++.|+++|++
T Consensus 331 -----------~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 331 -----------QRVIRLLPPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred -----------CCEEEEeCCcccCHHHHHHHHHHHHHHHHH
Confidence 23455543 346777888888888764
No 269
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.65 E-value=1.7e-14 Score=151.81 Aligned_cols=284 Identities=12% Similarity=0.056 Sum_probs=171.3
Q ss_pred hhHHHHHHHHHHHhCC-C--cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCH
Q 009172 210 PTTVVVEEKMSALEGA-E--STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~-~--~~i~~-sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dl 285 (541)
...++.++.++++++. + +++++ +||+.++++++.+++.+ +.+++..-.|+....-........+ ++..++....
T Consensus 41 ~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~ 118 (361)
T TIGR01366 41 NLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPG 118 (361)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccC-CceEEecCCC
Confidence 4677889999999997 2 34554 45889999999998743 3444555667654433333332233 4454543222
Q ss_pred HHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc-ccccccCCcEEEECCccccCCCCC
Q 009172 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-QKALSLGADLVLHSATKFIGGHND 364 (541)
Q Consensus 286 e~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~-~~~l~~gaDivv~S~sK~lgg~g~ 364 (541)
+.++..+++ ++++|.+.+..|.||.+.|+++| +|++|++++||.++..+.. .+..+ +|++++|.+|+++++++
T Consensus 119 ~~~~~~~~~-~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~~G 192 (361)
T TIGR01366 119 SAPEPQADP-GVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASDGG 192 (361)
T ss_pred CCCCCccCC-CCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCCCc
Confidence 334444555 59999999999999999999988 5889999999999776542 33332 89999999999999862
Q ss_pred ceEEEEEeChHHHHHHHHHhh---------------------hcCCCccHHHHHHHHHhHHH------HHHHHHHHHHHH
Q 009172 365 VLAGSISGSGKLVTQIRNLHH---------------------VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTA 417 (541)
Q Consensus 365 v~gG~vv~~~~li~~l~~~~~---------------------~~g~~~s~~~a~l~l~~l~t------l~~r~~~~~~na 417 (541)
.++++.++++++++..... ....+++....+.+..+++. ++.+.+++.+.+
T Consensus 193 --l~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~ 270 (361)
T TIGR01366 193 --LWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSS 270 (361)
T ss_pred --eEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 4556678877766552110 00122222322233333433 334456677788
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcc
Q 009172 418 LRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAI 497 (541)
Q Consensus 418 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~ 497 (541)
+++.++|.+.+.++ ++.+. +.+. ...-..++| +.+ .....+.+.|+..++.+..|.
T Consensus 271 ~~l~~~l~~~~~~~-~~~~~----~~~~------s~~v~~v~~--~~g-~~~~~v~~~L~~~gI~i~~~~---------- 326 (361)
T TIGR01366 271 SRLYSWAQERPYAT-PFVTD----PGKR------SQVVGTIDF--VDD-IDAATVAKILRANGIVDTEPY---------- 326 (361)
T ss_pred HHHHHHHHhCCCcc-cCCCC----hhhc------ccceEEEEC--CCc-cCHHHHHHHHHHCCCeeccCc----------
Confidence 88888888876532 11111 1100 001134555 332 223344444544455442210
Q ss_pred cccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 498 MSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 498 ~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
. . +.++.+|+|+...++++.++.|.++|+.
T Consensus 327 ---~--------~--l~~~~vRis~~~~~t~~di~~l~~al~~ 356 (361)
T TIGR01366 327 ---R--------K--LGRNQLRVAMFPAIDPDDVEALTECVDW 356 (361)
T ss_pred ---c--------c--cCCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence 0 0 1246799999988887777777777764
No 270
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.64 E-value=2e-13 Score=146.92 Aligned_cols=287 Identities=14% Similarity=0.126 Sum_probs=181.3
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc-----CCCEEEEcCCCCcchHHHHHhh-----c-ccC
Q 009172 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-----AGGHIVTTTDCYRKTRIFIETV-----L-PKM 273 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all~-----~GD~VIv~~~~y~~~~~~~~~~-----l-~~~ 273 (541)
+.+|...+|.++|+++... +.+++++||++|+.++++.... ...+||+....|++.....-.. . +.+
T Consensus 114 ~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~ 193 (442)
T TIGR03372 114 LLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPF 193 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCC
Confidence 4578888999999998764 4577889999999999873311 2357888888888853221111 0 111
Q ss_pred ---CcEEEEeCCCCHHHHHHhcc-----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCC---
Q 009172 274 ---GITATVIDPADMEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (541)
Q Consensus 274 ---Gi~v~~vd~~dle~Le~ai~-----~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~--- 338 (541)
...+..++..|.+++++.++ .+++.+|++|......|.+.| +++|.++|++||+++|+||++...
T Consensus 194 ~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt 273 (442)
T TIGR03372 194 MPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRT 273 (442)
T ss_pred CCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcc
Confidence 12345566678888777764 235899999999888898888 999999999999999999997421
Q ss_pred ---CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc--cHHHHHHHHHhHHHHHHH--HH
Q 009172 339 ---LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHLR--VQ 411 (541)
Q Consensus 339 ---~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~--s~~~a~l~l~~l~tl~~r--~~ 411 (541)
+.......-.|+++ ++|.++++- ...|.+++++++.+.+......++++. +|..+..++..|+.+... .+
T Consensus 274 G~~~a~e~~gv~PDivt--~gK~lg~G~-~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~ 350 (442)
T TIGR03372 274 GKMFACEHEGVQPDILC--LAKALGGGV-MPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPA 350 (442)
T ss_pred ccchhhhhcCCCCCeee--ehhhhcCCc-ccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 11222233468876 899998641 124666677888777642111234444 677777777777766422 23
Q ss_pred HHHHHHHHHHHHHHh----CC-CceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCC
Q 009172 412 QQNSTALRMAEILEA----HP-KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 412 ~~~~na~~la~~L~~----~p-~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G 486 (541)
+..+.-+++.+.|++ +| .+..| +|.|.|+.+++..+ +....+.+.+...++-++..
T Consensus 351 ~~~~~G~~l~~~L~~l~~~~~~~i~~v------------------RG~Gl~~giel~~~-~~~~~i~~~l~~~Gvl~~~~ 411 (442)
T TIGR03372 351 QAAIKGDFLLDGFQQLAAEYPDLIIEA------------------RGKGLLMAIEFRDN-EIGYAFAKELFQQNILVAGT 411 (442)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEE------------------ecceEEEEEEeCCh-HHHHHHHHHHHHCCcEEeec
Confidence 333334444444443 22 22222 46788999999643 34556666665555443311
Q ss_pred CcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 487 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 487 ~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+...+.|||+.-+-.+++.++.+.++|++
T Consensus 412 -------------------------~~~~~~lr~~Ppl~~t~~~id~~~~~l~~ 440 (442)
T TIGR03372 412 -------------------------LNNAKSIRIEPPLTITIEQCALVIKAAKD 440 (442)
T ss_pred -------------------------CCCCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 01236788888776666666666666653
No 271
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.64 E-value=2.5e-14 Score=151.55 Aligned_cols=214 Identities=19% Similarity=0.229 Sum_probs=150.1
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe--C----
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI--D---- 281 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v--d---- 281 (541)
++|+..+||+++++++|.+.++.++||+.|++++....++|||+| +.+.|..+.... ....|....-+ +
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ah---Ie~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYH---QEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHH---HHhCCeEEEeeecccccc
Confidence 688999999999999999999999999999888777778999977 667775554331 12233322222 1
Q ss_pred -----C----CCHHHHHHhccCC---CeeEEEEeCCCCCC-CcccC---HHHHHHHHHhCCCEEEEEcCCCC--C-----
Q 009172 282 -----P----ADMEGLEAALNNN---NVSLFFTESPTNPF-LRCVD---VKLVSDLCHKKGAIVCIDGTFAT--P----- 338 (541)
Q Consensus 282 -----~----~dle~Le~ai~~~---~tklV~lesp~NPt-G~v~d---i~~Ia~la~~~gillvvDea~a~--~----- 338 (541)
+ .|+++|+++|++. ++++|.+++++|.. |.+++ +++|.++|++||++||.|.+... .
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~ 223 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKE 223 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhc
Confidence 1 2799999999763 35688899999965 78854 78999999999999999998432 1
Q ss_pred ----Cccccc-------ccCCcEEEECCccccCCCCCceEEEEE-eChHHHHHHHHHhhhcCCC-----ccHHHHHHHHH
Q 009172 339 ----LNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGA-----LNPNAAYLIIR 401 (541)
Q Consensus 339 ----~~~~~l-------~~gaDivv~S~sK~lgg~g~v~gG~vv-~~~~li~~l~~~~~~~g~~-----~s~~~a~l~l~ 401 (541)
+...+. -..+|.++.|+.|..+.+ +||+++ .+++++++++.+...+++. ++.-....+..
T Consensus 224 re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~---~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~ 300 (450)
T TIGR02618 224 REQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVN---IGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAI 300 (450)
T ss_pred ccccccCCCHHHHHHHHhccCcEEEEeeccCCCCC---CceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHH
Confidence 111222 225899999999998877 478888 6778999988876554431 22222222233
Q ss_pred hHHHHH--HHHHHHHHHHHHHHHHHHhCCCc
Q 009172 402 GMKTLH--LRVQQQNSTALRMAEILEAHPKV 430 (541)
Q Consensus 402 ~l~tl~--~r~~~~~~na~~la~~L~~~p~v 430 (541)
+|+..- ....+..+++++|++.|.+. +|
T Consensus 301 gL~e~~~~~y~~~r~~~a~~La~~L~~~-Gv 330 (450)
T TIGR02618 301 GIREAVDYEYIEHRVKQVRYLGDKLKAA-GV 330 (450)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 444422 22344456689999999886 44
No 272
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.64 E-value=1.5e-14 Score=141.66 Aligned_cols=210 Identities=20% Similarity=0.254 Sum_probs=153.5
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHH-
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME- 286 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle- 286 (541)
....+..||.+||++.+.|++|+++++-.|+..++-+++.|.|.|......|.+...-+. +++++ ..+|..|++
T Consensus 110 tq~iHk~LE~kiAqfh~rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGir-Lckry----~h~dv~~l~~ 184 (417)
T KOG1359|consen 110 TQDIHKLLESKIAQFHGREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIR-LCKRY----RHVDVFDLEH 184 (417)
T ss_pred chHHHHHHHHHHHHHhCCCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhH-HHhhh----ccchhHHHHH
Confidence 345678999999999999999999999999999999999999999998888888665552 34433 223333433
Q ss_pred HHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccc-----c----ccCCcEEEECCcc
Q 009172 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA-----L----SLGADLVLHSATK 357 (541)
Q Consensus 287 ~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~-----l----~~gaDivv~S~sK 357 (541)
.+.++.+. +.|+|.....-+..|.+.|+++|.+++++||+++++||.+++++...- . .-.+|++..+++|
T Consensus 185 ~l~~a~k~-r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgK 263 (417)
T KOG1359|consen 185 CLISACKM-RLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGK 263 (417)
T ss_pred HHHHhhhh-eEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhh
Confidence 23334333 578999988889999999999999999999999999999888764211 1 1246899999999
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCCccHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHHh
Q 009172 358 FIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGALNPNAAYLIIRGMKTL---HLRVQQQNSTALRMAEILEA 426 (541)
Q Consensus 358 ~lgg~g~v~gG~vv~~~~li~~l~~~~~--~~g~~~s~~~a~l~l~~l~tl---~~r~~~~~~na~~la~~L~~ 426 (541)
.+||.. ||+..++++|+..+++..+ .+...++|...-.+...++.+ ...+++...+.+++.++.+.
T Consensus 264 AlGga~---GGyttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~ 334 (417)
T KOG1359|consen 264 ALGGAS---GGYTTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEA 334 (417)
T ss_pred hhcCCC---CCCccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 999764 8999999999998886443 345556554332222232222 22344555677777776664
No 273
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.62 E-value=3.1e-13 Score=143.92 Aligned_cols=236 Identities=13% Similarity=0.088 Sum_probs=149.1
Q ss_pred CCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc------cCC-CEEEEcCCCCcchHHHHHhhcccC-----
Q 009172 206 RYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV------PAG-GHIVTTTDCYRKTRIFIETVLPKM----- 273 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all------~~G-D~VIv~~~~y~~~~~~~~~~l~~~----- 273 (541)
.+.++...+|.++|.+..+.+.+++++||++|+..++.... ++| ++||+.+..|++.....-......
T Consensus 74 ~~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~ 153 (395)
T PRK03715 74 AFYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTI 153 (395)
T ss_pred cccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccC
Confidence 34566667777777776556789999999999999987653 123 578888888877432111111100
Q ss_pred ----CcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCC----C--
Q 009172 274 ----GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP----L-- 339 (541)
Q Consensus 274 ----Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~----~-- 339 (541)
-..+..++..|++++++.+.+ ++++|++|.+++..|.+.+ +++|.++|++||+++|+||++... .
T Consensus 154 ~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~ 232 (395)
T PRK03715 154 FAPQVPGFPKAELNDIASVEKLITD-KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLF 232 (395)
T ss_pred CCCCCCCceeeCCchHHHHHHHcCC-CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchh
Confidence 011222344688999999976 5999999998888888877 999999999999999999997631 1
Q ss_pred cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCC--CccHHHHHHHHHhHHHHHH--HHHHHHH
Q 009172 340 NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNAAYLIIRGMKTLHL--RVQQQNS 415 (541)
Q Consensus 340 ~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~--~~s~~~a~l~l~~l~tl~~--r~~~~~~ 415 (541)
.........|+++ ++|.++++ ...|.+++++++... .. ...+. ..+|..+..++..++.+.. ..++..+
T Consensus 233 a~~~~gv~PDi~t--~gK~lg~G--~p~~av~~~~~i~~~-~~--~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~ 305 (395)
T PRK03715 233 AYELSGIEPDIMT--LGKGIGGG--VPLAALLAKAEVAVF-EA--GDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRA 305 (395)
T ss_pred hHhhcCCCCceee--ehhhhhCC--cceEEEEEccccccc-cC--CCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 1122233467765 67999874 345667777776421 11 11122 2357777777777766542 2344445
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009172 416 TALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 416 na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g 464 (541)
...++.+.|++... .++ + ...+|.|.|+.+++..
T Consensus 306 ~g~~l~~~L~~l~~----~~~-i----------~~vrG~Glm~~i~l~~ 339 (395)
T PRK03715 306 RGEYLKEKLLELSE----ERG-L----------EGERGEGLLRALLLGK 339 (395)
T ss_pred HHHHHHHHHHHHhh----cCC-c----------CeEEcceeEEEEEecC
Confidence 55555555553210 011 1 1124678899999964
No 274
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.62 E-value=3.6e-13 Score=138.57 Aligned_cols=271 Identities=17% Similarity=0.189 Sum_probs=170.4
Q ss_pred EEEeCCH-HHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC----CHHHHHHhccCC-------
Q 009172 228 TVIMASG-MSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----DMEGLEAALNNN------- 295 (541)
Q Consensus 228 ~i~~sSG-~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~----dle~Le~ai~~~------- 295 (541)
-++.++| +.++..+++.++..||+|++...+|.+.. ...+..|+.+..|+.+ ++|.|++.+...
T Consensus 126 diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL----~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~ 201 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSAL----QSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKK 201 (472)
T ss_pred eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHH----HhccccCceEEeccccCCCCCHHHHHHHHhcCCcccccC
Confidence 4555666 48999999999999999999999998865 3456678888888754 688888877532
Q ss_pred -CeeEEEE-eCCCCCCCcccCHH---HHHHHHHhCCCEEEEEcCCCCC----Cc---------c-----------ccc--
Q 009172 296 -NVSLFFT-ESPTNPFLRCVDVK---LVSDLCHKKGAIVCIDGTFATP----LN---------Q-----------KAL-- 344 (541)
Q Consensus 296 -~tklV~l-esp~NPtG~v~di~---~Ia~la~~~gillvvDea~a~~----~~---------~-----------~~l-- 344 (541)
+.+++|. .+-+||||..+.++ +|.+||++|++++|+|+.|... +. + ..+
T Consensus 202 ~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflsl 281 (472)
T KOG0634|consen 202 PKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSL 281 (472)
T ss_pred CCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccc
Confidence 2455554 23349999999855 8999999999999999995321 00 0 011
Q ss_pred -ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHH---------HHHHHHhHHHHHHHHHHHH
Q 009172 345 -SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNA---------AYLIIRGMKTLHLRVQQQN 414 (541)
Q Consensus 345 -~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~---------a~l~l~~l~tl~~r~~~~~ 414 (541)
..|..|-..||||.++++. +.||+.+++.+++++-.........++.+. .|....-++.+..-.....
T Consensus 282 DtdGrVIr~dSFSKiiaPGl--RlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt 359 (472)
T KOG0634|consen 282 DTDGRVIRNDSFSKIIAPGL--RLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYT 359 (472)
T ss_pred cccccEEeccchhhhhcCcc--eeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1244577889999999765 679999999888876554432222222222 2222111233332222333
Q ss_pred HHHHHHHHHHHhC-CCc-eEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc-------CCHHHHHHHHHH-cCCCceeec
Q 009172 415 STALRMAEILEAH-PKV-KRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD-------GDLTATIKFIDA-LKIPYIAPS 484 (541)
Q Consensus 415 ~na~~la~~L~~~-p~v-~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~-------g~~~~~~~~l~~-L~~~~iavS 484 (541)
..+..+...|.++ |.- -.+..|. .|-++||+++ .+..+.+.++.. +...|+-+-
T Consensus 360 ~Rrn~~l~Al~kylp~~~~~~~~P~----------------aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v 423 (472)
T KOG0634|consen 360 ERRNALLSALDKYLPKSVCEYHPPK----------------AGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLV 423 (472)
T ss_pred HHHHHHHHHHHHhCCCCeeEEecCC----------------cceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEe
Confidence 4444455555543 443 3333332 5778899996 444445544433 234466666
Q ss_pred CCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHH
Q 009172 485 FGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQ 536 (541)
Q Consensus 485 ~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~ 536 (541)
.|..+... |... -..-++|+|+...+.+++.+.+++
T Consensus 424 ~G~~F~v~--p~~s--------------~~kiffRls~a~a~~e~l~~g~~r 459 (472)
T KOG0634|consen 424 CGSWFMVD--PESS--------------WSKIFFRLSIAFAEPEKLDEGIER 459 (472)
T ss_pred cCceeEEc--CccC--------------CCcceEEEEeecCCHHHHHHHHHH
Confidence 66655432 2110 012489999998888877776664
No 275
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.61 E-value=3.3e-13 Score=145.02 Aligned_cols=289 Identities=12% Similarity=0.156 Sum_probs=177.8
Q ss_pred CCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHHHHhhccc---
Q 009172 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLPK--- 272 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g--~~~~i~~sSG~~Ai~~al~all~-------~-GD~VIv~~~~y~~~~~~~~~~l~~--- 272 (541)
.+.++...+|.++|+++.+ .+.+++++||++|+..+++.... + ..+||.....|++.......+...
T Consensus 81 ~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~ 160 (423)
T PRK05964 81 GFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGM 160 (423)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccc
Confidence 4677888899999999885 36788899999999999874311 2 358888888898844222111100
Q ss_pred --------CCcEEEEeCCCC-----HHHHHHhccC--CCeeEEEEeC-CCCCCCcccC----HHHHHHHHHhCCCEEEEE
Q 009172 273 --------MGITATVIDPAD-----MEGLEAALNN--NNVSLFFTES-PTNPFLRCVD----VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 273 --------~Gi~v~~vd~~d-----le~Le~ai~~--~~tklV~les-p~NPtG~v~d----i~~Ia~la~~~gillvvD 332 (541)
.++....++..| ++++++.+.+ +++.+|++|. +.+..|...+ +++|.++|++||+++|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~D 240 (423)
T PRK05964 161 HALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFD 240 (423)
T ss_pred cccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 122222222234 7788888842 2588999988 5777787765 889999999999999999
Q ss_pred cCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH---h-hhcCCC--ccHHHHHHHH
Q 009172 333 GTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---H-HVLGGA--LNPNAAYLII 400 (541)
Q Consensus 333 ea~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~---~-~~~g~~--~s~~~a~l~l 400 (541)
|++... . .........|++ +++|.++++. ...|++++++++.+.+... . ..++++ .+|..+..++
T Consensus 241 Ev~tg~gr~G~~~a~~~~~v~pDi~--~~~K~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~ 317 (423)
T PRK05964 241 EIATGFGRTGTLFACEQAGVSPDIM--CLSKGLTGGY-LPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAAN 317 (423)
T ss_pred chhhCCCcCcchhHHHhcCCCCCee--eeehhhhcCc-ccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHH
Confidence 997432 1 112222345766 4779997653 2356788899888877531 1 112332 4667766666
Q ss_pred HhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--HHHHHHHHHc
Q 009172 401 RGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL--TATIKFIDAL 476 (541)
Q Consensus 401 ~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~--~~~~~~l~~L 476 (541)
..++.+.. ..++..+..+++.+.|++... +|.+ ...++.|.|+.|++.++. .....+...|
T Consensus 318 a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~-----~~~i----------~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l 382 (423)
T PRK05964 318 ASLDLFEDEPVLERVAALSAGLAEGLEPFRD-----LPGV----------ADVRVLGAIGAVELDRPVLERDGPALRAFA 382 (423)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHhhcc-----CCCe----------EEeecccEEEEEEeccCcchhHHHHHHHHH
Confidence 66665432 344555556666666654311 2221 112457889999996532 1345666666
Q ss_pred CCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHhh
Q 009172 477 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALHA 540 (541)
Q Consensus 477 ~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E----d~edli~dL~~AL~~ 540 (541)
...|+-++. ..+.|||+..+. +++.+++.|+++|++
T Consensus 383 ~~~Gv~v~~----------------------------~~~~lR~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 383 LERGVLLRP----------------------------LGNTIYLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred HHCCeEEEe----------------------------cCCEEEEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 544433221 024689987654 455555566665554
No 276
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=1.8e-13 Score=139.86 Aligned_cols=253 Identities=21% Similarity=0.232 Sum_probs=168.9
Q ss_pred CCCCCCC--CchhHHHHH----HHHHHHhCCCcE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccC
Q 009172 201 SFEYGRY--GNPTTVVVE----EKMSALEGAEST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 201 ~~~Y~R~--~~p~~~~Le----~~LA~l~g~~~~-i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~ 273 (541)
+|-.-|| +...++++| ++..+++|++.+ +=-.||+.|+.+++.++++|||+|+-.+..+++....-.. ....
T Consensus 57 GyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~~-v~~s 135 (413)
T COG0112 57 GYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSP-VNFS 135 (413)
T ss_pred CCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCCC-CCcc
Confidence 4444444 344555544 455678898754 5667999999999999999999999999988884321100 0111
Q ss_pred C--cEEEEe--C----CCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCC-----CCCCc
Q 009172 274 G--ITATVI--D----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-----ATPLN 340 (541)
Q Consensus 274 G--i~v~~v--d----~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~-----a~~~~ 340 (541)
| .++... + ..|.|++++.+.+.++|+|++- .+-.-+..|.+++.++|++.|++|++|-++ +.+..
T Consensus 136 G~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G--~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~ 213 (413)
T COG0112 136 GKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAG--GSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVH 213 (413)
T ss_pred ceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEEC--ccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccC
Confidence 2 222222 2 1388999998887789999872 234567889999999999999999999994 34566
Q ss_pred ccccccCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhh--hcCCCccHHHHHHH---HHhHH-HHHHHHHHH
Q 009172 341 QKALSLGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHH--VLGGALNPNAAYLI---IRGMK-TLHLRVQQQ 413 (541)
Q Consensus 341 ~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~-~li~~l~~~~~--~~g~~~s~~~a~l~---l~~l~-tl~~r~~~~ 413 (541)
++|+.+ +|+|..|.||.|.|+. ||++..++ ++.+++.+... ..|+.+--..+..+ ...++ .+....++.
T Consensus 214 p~P~~~-AdvVTtTTHKTlrGPr---GG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qV 289 (413)
T COG0112 214 PNPLPH-ADVVTTTTHKTLRGPR---GGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQV 289 (413)
T ss_pred CCCCCc-cceEeCCcccCCCCCC---ceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 789988 9999999999999984 89999885 78888876322 22221111111111 11221 234556777
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC---CHHHHHHHHHHcC
Q 009172 414 NSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLTATIKFIDALK 477 (541)
Q Consensus 414 ~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g---~~~~~~~~l~~L~ 477 (541)
.+|++.|++.|.+.. ++ +.--+.++ .++.+++.. +...++..+++..
T Consensus 290 v~NAkaLAe~l~~~G-~~-vvsGgTdn---------------Hl~lVDl~~~~~~Gk~ae~~L~~~~ 339 (413)
T COG0112 290 VKNAKALAEALKERG-FK-VVSGGTDN---------------HLVLVDLRSKGLTGKKAEAALERAG 339 (413)
T ss_pred HHHHHHHHHHHHHcC-Ce-EecCCccc---------------eEEEEEcccCCCCHHHHHHHHHHcC
Confidence 899999999999853 32 22223223 267777752 2356667666653
No 277
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.60 E-value=5.9e-13 Score=144.15 Aligned_cols=292 Identities=15% Similarity=0.173 Sum_probs=179.8
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc--c--CC-CEEEEcCCCCcchHHHHHhhcc--------
Q 009172 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--P--AG-GHIVTTTDCYRKTRIFIETVLP-------- 271 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all--~--~G-D~VIv~~~~y~~~~~~~~~~l~-------- 271 (541)
+.+|...+|.++|+++... +.+++++||++|+..+++... . .| .+||.....|++.....-..-.
T Consensus 121 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~ 200 (459)
T PRK11522 121 LLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPF 200 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCC
Confidence 4578888999999998754 467888999999999987431 1 12 4688888888884322111100
Q ss_pred -cCCcEEEEeCCCCHHHHHHhccC-----CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCC---
Q 009172 272 -KMGITATVIDPADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (541)
Q Consensus 272 -~~Gi~v~~vd~~dle~Le~ai~~-----~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~--- 338 (541)
.....+..++..|.+++++.++. +++.+|++|......|.+.| ++++.++|++||+++|+||++...
T Consensus 201 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRt 280 (459)
T PRK11522 201 MPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRT 280 (459)
T ss_pred CCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCcc
Confidence 00112344556688888887752 35789999999988898887 999999999999999999996421
Q ss_pred ---CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCc--cHHHHHHHHHhHHHHHH--HHH
Q 009172 339 ---LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGAL--NPNAAYLIIRGMKTLHL--RVQ 411 (541)
Q Consensus 339 ---~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~--s~~~a~l~l~~l~tl~~--r~~ 411 (541)
+.......-.|++ +++|.++++- ...|.+++++++.+.+......++.+. +|..+..++..|+.+.. ..+
T Consensus 281 G~~~a~e~~gv~PDiv--t~gK~lggG~-~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~ 357 (459)
T PRK11522 281 GKMFACEHENVQPDIL--CLAKALGGGV-MPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPA 357 (459)
T ss_pred chhhhhhccCCCCCEE--EechhhhCCC-ccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHH
Confidence 1112222336777 4899998641 124666677777765532111234444 67777777777776642 233
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccc
Q 009172 412 QQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESI 491 (541)
Q Consensus 412 ~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl 491 (541)
+..+..+++.+.|++... .+|.+ -...+|.|.|+.+++..+ +....+.+.+...|+-+...
T Consensus 358 ~~~~~g~~l~~~L~~l~~----~~~~~---------i~~VrG~Gl~~giel~~~-~~~~~i~~~l~~~Gvl~~~~----- 418 (459)
T PRK11522 358 QAEQKGDYLLDGFRQLAR----EYPDL---------VQEARGKGMLMAIEFVDN-EIGYNFASEMFRQRVLVAGT----- 418 (459)
T ss_pred HHHHHHHHHHHHHHHHHH----hCCCc---------eeeEEeceeEEEEEecCc-hHHHHHHHHHHHCCeEEEec-----
Confidence 444444555555543210 11110 012246788999999643 34556666665545443211
Q ss_pred eecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009172 492 VDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 492 ~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~~ 540 (541)
+...+.||+...+ ++.+++++.|+++|++
T Consensus 419 --------------------~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~ 451 (459)
T PRK11522 419 --------------------LNNAKTIRIEPPLTLTIEQCEQVLKAARKALAA 451 (459)
T ss_pred --------------------CCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 0123578877664 4556666677666653
No 278
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=3.8e-13 Score=145.00 Aligned_cols=295 Identities=17% Similarity=0.140 Sum_probs=173.8
Q ss_pred CCCCchhHHHHHHHHHHHh-CC-CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhh-c-----cc-C
Q 009172 205 GRYGNPTTVVVEEKMSALE-GA-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV-L-----PK-M 273 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~-g~-~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~-l-----~~-~ 273 (541)
+.+.++...+|.++|+++. +. +.+++++||++|+..+++.. .....+||..+..|++.......+ . .. +
T Consensus 81 ~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 160 (433)
T PRK08117 81 GVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYY 160 (433)
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccC
Confidence 3457888999999999998 33 44566689999999998742 222367888888887743211000 0 00 0
Q ss_pred C---cEEEEeCC-----------------CCHHHHHHhcc----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhC
Q 009172 274 G---ITATVIDP-----------------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (541)
Q Consensus 274 G---i~v~~vd~-----------------~dle~Le~ai~----~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~ 325 (541)
+ ..+.+++. .+++++++.++ .+++.+|++|......|.+.+ +++|.++|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~ 240 (433)
T PRK08117 161 QPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRH 240 (433)
T ss_pred CCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHc
Confidence 0 01122221 14556666653 235899999999988899988 99999999999
Q ss_pred CCEEEEEcCCCCCCc-ccc---cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHH
Q 009172 326 GAIVCIDGTFATPLN-QKA---LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIR 401 (541)
Q Consensus 326 gillvvDea~a~~~~-~~~---l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~ 401 (541)
|+++|+||++..... ... ...|++.-+.+++|.++++ ...|++++++++.+.+...........+|..+..++.
T Consensus 241 g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg~G--~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a 318 (433)
T PRK08117 241 GILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIASG--LPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALA 318 (433)
T ss_pred CCEEEEecchhccCccccchhHhhcCCCCCEeehhhhccCC--CcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHH
Confidence 999999999764211 111 1234333345799999853 4567888898887766432221112346777777777
Q ss_pred hHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-----HHHHHHHHH
Q 009172 402 GMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----LTATIKFID 474 (541)
Q Consensus 402 ~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-----~~~~~~~l~ 474 (541)
.++.+.. ..++..+..+++.+.|++... .+|.. ...++.|.++.+++..+ ......+.+
T Consensus 319 ~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~----------~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~ 384 (433)
T PRK08117 319 TLEVIKEEKLLDNANEMGAYALERLEVLKE----KHPVI----------GDVRGIGLMIGIEIVDPDGEPDGDAVEKILD 384 (433)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHh----cCCce----------eeeecCCcEEEEEEecCCCCcchHHHHHHHH
Confidence 7766532 223333444444444443210 11110 11356788889998531 233445555
Q ss_pred HcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009172 475 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 475 ~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~~ 540 (541)
.+...|+.+... |-..+.|||+..+ ++.++.++.|.++|++
T Consensus 385 ~l~~~Gv~~~~~-------------------------g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 385 KCLEKGLLFYLC-------------------------GNAGNVLRMIPPLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred HHHHCCCEEeec-------------------------CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 554444322110 1124689988644 4556666666666653
No 279
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.59 E-value=7.1e-13 Score=142.31 Aligned_cols=288 Identities=15% Similarity=0.168 Sum_probs=172.3
Q ss_pred CCCCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhhc-----ccC
Q 009172 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVL-----PKM 273 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~---~~~i~~sSG~~Ai~~al~all--~~GD~VIv~~~~y~~~~~~~~~~l-----~~~ 273 (541)
+..+.++...+|.++|+++.+. +.+++++||++|+..+++... ....+|+.....|++.....-..- .+.
T Consensus 77 ~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 156 (421)
T PRK09792 77 YQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKI 156 (421)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCccccc
Confidence 4445788888999999998752 568889999999999987432 223578888888888432211110 011
Q ss_pred C-----cEEEEeCC----------CCHHHHHHhcc----CCCeeEEEEeCCCCCCCccc-C---HHHHHHHHHhCCCEEE
Q 009172 274 G-----ITATVIDP----------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVC 330 (541)
Q Consensus 274 G-----i~v~~vd~----------~dle~Le~ai~----~~~tklV~lesp~NPtG~v~-d---i~~Ia~la~~~gillv 330 (541)
+ ..+..++. .+++.+++.++ .+++++|++|...+++|... | +++|.++|++||+++|
T Consensus 157 ~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK09792 157 GFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMI 236 (421)
T ss_pred CCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 1 11222222 13477887775 23589999999999999765 6 8899999999999999
Q ss_pred EEcCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH
Q 009172 331 IDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (541)
Q Consensus 331 vDea~a~~-~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~ 404 (541)
+||++... .. ........|+ .+++|.++++ ...|++++++++.+.+...........+|..+.+++..++
T Consensus 237 ~DEv~tg~gr~G~~~a~~~~~~~pDi--~t~gK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~ 312 (421)
T PRK09792 237 ADEVQSGFARTGKLFAMDHYADKPDL--MTMAKSLAGG--MPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLN 312 (421)
T ss_pred EeccccCCCCCCchhHHHhcCCCCcE--EEeehhhcCC--CceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence 99996542 11 1112223565 5689999864 3578888998888766532221222345666665555555
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------HHHHHHH
Q 009172 405 TLHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTATIKF 472 (541)
Q Consensus 405 tl~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~------~~~~~~~ 472 (541)
.+.. .+++..+..+++.+.|+. +|.+. +.+|.|.+++++++++ ......+
T Consensus 313 ~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v~------------------~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l 374 (421)
T PRK09792 313 IIDKESLCERANQLGQRLKNTLIDAKESVPAIA------------------AVRGLGSMIAAEFNDPQTGEPSAAIAQKI 374 (421)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcc------------------eecccceEEEEEecCCccCCcchHHHHHH
Confidence 4432 122222333333333332 23221 2256789999999643 1234556
Q ss_pred HHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHH
Q 009172 473 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQAL 538 (541)
Q Consensus 473 l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL 538 (541)
...+...|+.+.. .|...+.|||...+ ++.+..++.|.++|
T Consensus 375 ~~~~~~~Gv~i~~-------------------------~g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l 419 (421)
T PRK09792 375 QQRALAQGLLLLT-------------------------CGAYGNVIRFLYPLTIPDAQFDAAMKILQDAL 419 (421)
T ss_pred HHHHHHCCcEEee-------------------------cCCCCCEEEEeCCCcCCHHHHHHHHHHHHHHH
Confidence 6555444443310 01124689998766 34455555555554
No 280
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.58 E-value=8.1e-13 Score=142.08 Aligned_cols=289 Identities=14% Similarity=0.169 Sum_probs=172.2
Q ss_pred CCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc-----cCC--
Q 009172 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP-----KMG-- 274 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~---~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~-----~~G-- 274 (541)
+.++...+|.+.|+++.+. +..++++||++|+..++... .....+||+..+.|++........-. ..|
T Consensus 81 ~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~ 160 (425)
T PRK08088 81 LAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMG 160 (425)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCC
Confidence 4567777899999988763 47889999999888887643 22345677778888886533322110 001
Q ss_pred -----cEEEEeC--CC------CHHHHHHhcc----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEc
Q 009172 275 -----ITATVID--PA------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDG 333 (541)
Q Consensus 275 -----i~v~~vd--~~------dle~Le~ai~----~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDe 333 (541)
+....++ .. +++.++++++ .+++++|++|...+..|.+.+ +++|.++|+++|+++|+||
T Consensus 161 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~De 240 (425)
T PRK08088 161 LMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE 240 (425)
T ss_pred CCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1111111 11 1556887775 235889999887755566555 8899999999999999999
Q ss_pred CCCCC-Cccccc---ccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHH--
Q 009172 334 TFATP-LNQKAL---SLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLH-- 407 (541)
Q Consensus 334 a~a~~-~~~~~l---~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~-- 407 (541)
++... ...... ..+.+.-+.|++|.++++ ...|++++++++++.+...........++..+.++...++...
T Consensus 241 v~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G--~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~ 318 (425)
T PRK08088 241 VQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGG--FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQE 318 (425)
T ss_pred cccCCCcCcchhHHhhcCCCCCEEEEeccccCC--CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 97642 111111 234444567899999854 4579999999998887654333333456666666666665432
Q ss_pred HHHHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-------CHHHHHHHHHHc
Q 009172 408 LRVQQQNSTALRMAEILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DLTATIKFIDAL 476 (541)
Q Consensus 408 ~r~~~~~~na~~la~~L~----~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g-------~~~~~~~~l~~L 476 (541)
..+++..+..+++.+.|. ++|.+..+ +|.|.++|+++.. +......+...+
T Consensus 319 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v------------------~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~ 380 (425)
T PRK08088 319 NLLQKANALGEKLKDGLLAIAEKHPEIGDV------------------RGLGAMIAIELFEDGDHSKPNAKLTAQIVARA 380 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------eccceEEEEEEecCCCCCCCCHHHHHHHHHHH
Confidence 122222223333333332 23332222 3457899999942 123456666666
Q ss_pred CCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHhh
Q 009172 477 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVE----DFEDLKADVLQALHA 540 (541)
Q Consensus 477 ~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~E----d~edli~dL~~AL~~ 540 (541)
...++.+..+ +...+.|||++... +++..++.|.++|++
T Consensus 381 ~~~Gv~~~~~-------------------------~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 381 RDKGLILLSC-------------------------GPYYNVLRILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred HhCCCEEecC-------------------------CCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 5444332211 01136799999853 344555666666553
No 281
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.58 E-value=3.4e-13 Score=145.03 Aligned_cols=287 Identities=18% Similarity=0.186 Sum_probs=179.2
Q ss_pred CCchhHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHHhhc-------c--c-C
Q 009172 207 YGNPTTVVVEEKMSALE-GAESTVIMASGMSASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETVL-------P--K-M 273 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~-g~~~~i~~sSG~~Ai~~al~all~--~GD~VIv~~~~y~~~~~~~~~~l-------~--~-~ 273 (541)
+.++...+|.++|+++. +.+.+++++||++|+..+++.... .+++||..++.|++......... . . .
T Consensus 87 ~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 166 (426)
T PRK00062 87 APTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSP 166 (426)
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCC
Confidence 45777889999999876 346788899999999999986432 36789999999998542221110 0 0 0
Q ss_pred Cc------EEEEeCCCCHHHHHHhccC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCCCc-
Q 009172 274 GI------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATPLN- 340 (541)
Q Consensus 274 Gi------~v~~vd~~dle~Le~ai~~--~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~~~- 340 (541)
+. ....++..|++++++.+.. +++++|++|.....+|.+.+ +++|.++|++||+++|+||++.....
T Consensus 167 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g 246 (426)
T PRK00062 167 GVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVA 246 (426)
T ss_pred CCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccC
Confidence 11 1233445688999888852 35899999977777899988 89999999999999999999753211
Q ss_pred ----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh---hhcCCCccHHHHHHHHHhHHHHHH--HHH
Q 009172 341 ----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLGGALNPNAAYLIIRGMKTLHL--RVQ 411 (541)
Q Consensus 341 ----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~---~~~g~~~s~~~a~l~l~~l~tl~~--r~~ 411 (541)
........|+ .+++|.++++ ...|++++++++++.+.... .......+|..+..++..|+.+.. ..+
T Consensus 247 ~~~~~~~~~~~pDi--~~~gK~l~~G--~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~ 322 (426)
T PRK00062 247 LGGAQGYYGVTPDL--TTLGKIIGGG--LPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYE 322 (426)
T ss_pred CccHHHHhCCCcch--HhhhhHhhCC--CcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHH
Confidence 1111222454 4689999853 33577788888888775321 111224567777776667766543 334
Q ss_pred HHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------------HHHHHHHHHH
Q 009172 412 QQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------------LTATIKFIDA 475 (541)
Q Consensus 412 ~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~------------~~~~~~~l~~ 475 (541)
+..+...++.+.|++ ++.+..+ ++.|.|+.+++..+ ...+..+.+.
T Consensus 323 ~~~~~~~~~~~~l~~~~~~~~~~~~v------------------rg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~ 384 (426)
T PRK00062 323 ELEALTKRLAEGLKEAAKKAGIPLTV------------------NRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHA 384 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEE------------------EEecceEEEEEecCCCcchhhhccccHHHHHHHHHH
Confidence 444555555555543 2322111 34688999988531 1234566666
Q ss_pred cCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 476 LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 476 L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+...|+-+...+.. .-.+.+.+..++.+++++.|++++.+
T Consensus 385 l~~~Gv~v~~~~~~-------------------------~~~~~~~~t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 385 MLDEGVYLAPSQFE-------------------------AGFVSAAHTDEDIEKTLEAARKAFAA 424 (426)
T ss_pred HHHCCeEeecCCcC-------------------------ceeeeccCCHHHHHHHHHHHHHHHHh
Confidence 65555443321110 00123334446677778888777765
No 282
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.58 E-value=4.1e-13 Score=130.44 Aligned_cols=218 Identities=16% Similarity=0.242 Sum_probs=160.9
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC----
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
..|....+-+.|++++|.+.+-++.+.-+|-++++.+++++||.|++....|..++. .+.+.|.++..++..
T Consensus 59 ~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyv----AAEragl~v~eVp~tg~Pe 134 (382)
T COG1103 59 TKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYV----AAERAGLNVAEVPNTGYPE 134 (382)
T ss_pred cCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHH----HHHhcCCeEEecCCCCCCc
Confidence 457777887779999999766665555599999999999999999999999988773 356678888888642
Q ss_pred ---CHHHHHHhc----cC--CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEEEE
Q 009172 284 ---DMEGLEAAL----NN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLH 353 (541)
Q Consensus 284 ---dle~Le~ai----~~--~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDivv~ 353 (541)
+++...+.| ++ ..+.+.++.+|....|.+.|.+.++++|+++|+++++..+|..+ .+.+..+.|+|+++.
T Consensus 135 y~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVg 214 (382)
T COG1103 135 YKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVG 214 (382)
T ss_pred eEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEe
Confidence 455544444 22 24789999999999999999999999999999999999998875 446667889999999
Q ss_pred CCccccCCCCCceEEEEEeChHHHHHHHHHh-h--------hcCCCccHHHHHHHHHhHHHHHHHHHH---HHHHHHHHH
Q 009172 354 SATKFIGGHNDVLAGSISGSGKLVTQIRNLH-H--------VLGGALNPNAAYLIIRGMKTLHLRVQQ---QNSTALRMA 421 (541)
Q Consensus 354 S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~-~--------~~g~~~s~~~a~l~l~~l~tl~~r~~~---~~~na~~la 421 (541)
|.||.++..+ ..|++..+.++.+.+-+.. . .+|.+.-......+..++-....|+++ ..++++++.
T Consensus 215 SGHKsmAAs~--PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv 292 (382)
T COG1103 215 SGHKSMAASA--PIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFV 292 (382)
T ss_pred cCccchhccC--CeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998766 5799999998887754322 1 344432222222233344444444443 446777888
Q ss_pred HHHHhCCCce
Q 009172 422 EILEAHPKVK 431 (541)
Q Consensus 422 ~~L~~~p~v~ 431 (541)
+.|++..++.
T Consensus 293 ~elEkigg~~ 302 (382)
T COG1103 293 AELEKIGGVK 302 (382)
T ss_pred HHHHHhhhHH
Confidence 8888765443
No 283
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=9.2e-13 Score=142.21 Aligned_cols=284 Identities=14% Similarity=0.156 Sum_probs=171.4
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchH-HHHHhh-----cc-cCC-
Q 009172 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTR-IFIETV-----LP-KMG- 274 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~-~~~~~~-----l~-~~G- 274 (541)
+.++...+|.++|+++.+. +.+++++||++|+..+++.. .....+|+.-...|++.. ..+... .. .++
T Consensus 81 ~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~ 160 (443)
T PRK08360 81 GFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGE 160 (443)
T ss_pred cCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCC
Confidence 3467788999999998864 46788899999999998743 223457888777887743 111100 00 011
Q ss_pred -cEEEEeCC-----------------CCHHHHHHhcc----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCE
Q 009172 275 -ITATVIDP-----------------ADMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (541)
Q Consensus 275 -i~v~~vd~-----------------~dle~Le~ai~----~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gil 328 (541)
..+.+++. .+++.+++.+. .+++++|++|...||+|.+.+ +++|.++|++||++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~l 240 (443)
T PRK08360 161 LSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGIL 240 (443)
T ss_pred CCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 11222221 12344555553 236999999988899998876 88999999999999
Q ss_pred EEEEcCCCCC-Cccc-----ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHh
Q 009172 329 VCIDGTFATP-LNQK-----ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (541)
Q Consensus 329 lvvDea~a~~-~~~~-----~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~ 402 (541)
+|+||++... .... ......|++ +++|.++++ ...|++++++++++.+...........++..+..++..
T Consensus 241 lI~DEv~~g~gr~G~~~a~~~~~~~pDii--tlsK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~ 316 (443)
T PRK08360 241 LVVDEVQSGLGRTGKWFAIEHFGVEPDII--TLGKPLGGG--LPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAV 316 (443)
T ss_pred EEEeccccCCCcCccchhhhhcCCCCCEE--EecccccCC--ceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHH
Confidence 9999997642 1111 112235666 579999953 45788999988888775432222333456666666666
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------HHHH
Q 009172 403 MKTLHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTAT 469 (541)
Q Consensus 403 l~tl~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-------~~~~ 469 (541)
++.+.. ..++..+..+++.+.|++ +|.+.. .+|.|.|+.+++..+ ...+
T Consensus 317 l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~------------------vrg~Gl~~gie~~~~~~~~~~~~~~~ 378 (443)
T PRK08360 317 IEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGD------------------VRGIGLMIGVDLVKDRETKERAYEEA 378 (443)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeee------------------eeccceEEEEEEecCCcccCccHHHH
Confidence 665532 233333444445444443 232222 255788999998532 1234
Q ss_pred HHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009172 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~ 539 (541)
..+...+...|+-+.. ...+.+||+..+ ++.+.+++.|+++|.
T Consensus 379 ~~~~~~l~~~Gi~~~~---------------------------~~~~~lr~~P~l~~t~~~id~~~~~l~~~l~ 425 (443)
T PRK08360 379 AKVVWRAWELGLIVTF---------------------------FSGNVLRIQPPLTIEKEVLDEGLDILEEAIE 425 (443)
T ss_pred HHHHHHHHHCCeEEee---------------------------cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 5566555544433221 013568886554 455666666666664
No 284
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.57 E-value=1.1e-12 Score=151.84 Aligned_cols=289 Identities=15% Similarity=0.141 Sum_probs=178.2
Q ss_pred hHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHh----ccCCC----EEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 211 TTVVVEEKMSALEGAESTVIMASGM-SASTVMLLAL----VPAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~~~i~~sSG~-~Ai~~al~al----l~~GD----~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...++++.|++++|.+.+-+..+|+ ++..+.++++ .++|| +|++++..|++.... +...|++++.++
T Consensus 543 ~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~s----a~~~G~~vv~v~ 618 (954)
T PRK05367 543 LIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPAS----AVMAGMKVVVVA 618 (954)
T ss_pred HHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHH----HHHCCCEEEEEC
Confidence 3557789999999998766666554 5554444332 35666 599999999886643 345688988886
Q ss_pred CC-----CHHHHHHhccCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC--CcccccccCCcEEE
Q 009172 282 PA-----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVL 352 (541)
Q Consensus 282 ~~-----dle~Le~ai~~~--~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~--~~~~~l~~gaDivv 352 (541)
.+ |+++|+++++++ ++.+|++.+|++-.+...|+++|+++||++|+++++|.++... ....+.++|+|+++
T Consensus 619 ~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~ 698 (954)
T PRK05367 619 CDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSH 698 (954)
T ss_pred CCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEE
Confidence 42 789999999653 4788888888865444578999999999999999999998532 22456788999999
Q ss_pred ECCccccCCCC---CceEEEEEeChHHHHHHHHHh----h---hcCCCc-cHH---------HHHHHHHhHHHHHHHHHH
Q 009172 353 HSATKFIGGHN---DVLAGSISGSGKLVTQIRNLH----H---VLGGAL-NPN---------AAYLIIRGMKTLHLRVQQ 412 (541)
Q Consensus 353 ~S~sK~lgg~g---~v~gG~vv~~~~li~~l~~~~----~---~~g~~~-s~~---------~a~l~l~~l~tl~~r~~~ 412 (541)
.|+||+|+.+- +--.|.++.++.+...+.... . ..|... +++ ..|+...|.+.+....++
T Consensus 699 ~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~ 778 (954)
T PRK05367 699 LNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEV 778 (954)
T ss_pred ecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Confidence 99999975321 112567776654443332211 0 011111 111 122223345556666677
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEE-EEcCC-HHHHHHHHHHcCCCceeecCCCccc
Q 009172 413 QNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF-EVDGD-LTATIKFIDALKIPYIAPSFGGCES 490 (541)
Q Consensus 413 ~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf-~l~g~-~~~~~~~l~~L~~~~iavS~G~~~s 490 (541)
...++.++++.|+++.. +.|++-....- ...++.+ .++.. ......+.++|...|+....
T Consensus 779 ~~~~A~Yl~~~L~~~~~---~~~~~~~~~~~----------~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t----- 840 (954)
T PRK05367 779 AILNANYIAKRLKDHYP---VLYTGANGRVA----------HECILDLRPLKESTGITVDDIAKRLIDYGFHAPT----- 840 (954)
T ss_pred HHHHHHHHHHHHHhhcC---ccccCCCCCcc----------cceEEEeecccccCCCCHHHHHHHHHHCCCeEee-----
Confidence 77889999999977532 33332100001 1235555 23311 01234555665444432111
Q ss_pred ceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 491 IVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 491 l~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
++ +.+ .+.+||++...+..+.++.|.++|.+
T Consensus 841 -------~~-----------~pv-~~~l~i~ptE~~s~~elDr~~~al~~ 871 (954)
T PRK05367 841 -------MS-----------FPV-AGTLMVEPTESESKAELDRFCDAMIA 871 (954)
T ss_pred -------cC-----------Ccc-CCEEEEEeeecCCHHHHHHHHHHHHH
Confidence 00 011 57899999987777777877777754
No 285
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.57 E-value=3.6e-13 Score=141.70 Aligned_cols=240 Identities=22% Similarity=0.247 Sum_probs=145.6
Q ss_pred HHHHHHHhCCC----cE-EEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhh-ccc-----CCcEEEE--eCC
Q 009172 216 EEKMSALEGAE----ST-VIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV-LPK-----MGITATV--IDP 282 (541)
Q Consensus 216 e~~LA~l~g~~----~~-i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~-l~~-----~Gi~v~~--vd~ 282 (541)
++++.+++|++ .+ +=.-||+.|+.+++.+|++|||+|+..+..+++....-... .++ ...++.. +|.
T Consensus 72 ~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~ 151 (399)
T PF00464_consen 72 IERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDP 151 (399)
T ss_dssp HHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-T
T ss_pred HHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeec
Confidence 56677889987 44 45679999999999999999999999998887643110000 000 1123333 232
Q ss_pred ----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCC-----CCCcccccccCCcEEEE
Q 009172 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA-----TPLNQKALSLGADLVLH 353 (541)
Q Consensus 283 ----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a-----~~~~~~~l~~gaDivv~ 353 (541)
.|.+++++.+...++|+|++-.-+ .....|++++.++|++.|++|++|.++. .+...+|+++ +|++..
T Consensus 152 ~~~~ID~d~l~~~a~~~kPklIi~G~S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-ADvvt~ 228 (399)
T PF00464_consen 152 DTGLIDYDELEKLAKEHKPKLIICGASS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-ADVVTG 228 (399)
T ss_dssp TTSSB-HHHHHHHHHHH--SEEEEE-SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SSEEEE
T ss_pred CCCeECHHHHHHHHhhcCCCEEEECchh--ccCccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-ceEEEe
Confidence 388999998876678999984333 4567899999999999999999999954 4566789987 999999
Q ss_pred CCccccCCCCCceEEEEEeC--------------hHHHHHHHHHhhh--cCCCccHHHHHHHH---HhH-HHHHHHHHHH
Q 009172 354 SATKFIGGHNDVLAGSISGS--------------GKLVTQIRNLHHV--LGGALNPNAAYLII---RGM-KTLHLRVQQQ 413 (541)
Q Consensus 354 S~sK~lgg~g~v~gG~vv~~--------------~~li~~l~~~~~~--~g~~~s~~~a~l~l---~~l-~tl~~r~~~~ 413 (541)
|+||.|.|+. +|+++.+ +++.+++.+.... .|+...-..+.++. ..+ .......++.
T Consensus 229 sThKtl~GPr---ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qV 305 (399)
T PF00464_consen 229 STHKTLRGPR---GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQV 305 (399)
T ss_dssp ESSGGG-SSS----EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred eccccccccC---ceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHH
Confidence 9999999985 8999998 6788888764321 22211111122211 111 1245667888
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC---CHHHHHHHHHHcCC
Q 009172 414 NSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLTATIKFIDALKI 478 (541)
Q Consensus 414 ~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g---~~~~~~~~l~~L~~ 478 (541)
.+|++.|++.|.+.. + +|..-+-. ..+|++++.. +...+.+++++..+
T Consensus 306 v~NAk~La~~L~~~G-~-~v~~ggTd---------------~H~vlvd~~~~~~~g~~a~~~Le~~gI 356 (399)
T PF00464_consen 306 VKNAKALAEALQERG-F-KVVTGGTD---------------NHQVLVDLRSFGIDGKEAEKALEEAGI 356 (399)
T ss_dssp HHHHHHHHHHHHHTT---EEGGGS-S---------------SSEEEEEGGGGTS-HHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHhhCC-c-EEEECCCC---------------CCeEEEEecccccchHHHHHHHHhcCe
Confidence 899999999999864 2 23332222 3478888853 23556677776644
No 286
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.57 E-value=8.6e-13 Score=152.89 Aligned_cols=160 Identities=22% Similarity=0.305 Sum_probs=127.3
Q ss_pred hHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh-ccC--CCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCH
Q 009172 211 TTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPA--GGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~al-l~~--GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dl 285 (541)
...++++.++++.|.+ ++-++.+++++.+.+++++ .++ +|+|++++.+|+.+...+...++..|++++.++..+
T Consensus 122 al~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~- 200 (954)
T PRK05367 122 ALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK- 200 (954)
T ss_pred HHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc-
Confidence 3456688999999985 4577788888777777765 445 489999999999998888777888999999988643
Q ss_pred HHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCC-CCCCcccccccCCcEEEECCccc-----c
Q 009172 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKF-----I 359 (541)
Q Consensus 286 e~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~-a~~~~~~~l~~gaDivv~S~sK~-----l 359 (541)
++. .+ ++..+++..| |.+|.+.|+++|+++||++|+++++|... +......|-++|+||++.|.+|| +
T Consensus 201 -d~~---~~-~~~~vlvq~p-~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~ 274 (954)
T PRK05367 201 -ALD---HD-DVFGVLLQYP-GTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGF 274 (954)
T ss_pred -CCC---cc-cEEEEEEecC-CCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCC
Confidence 111 22 4777777666 57999999999999999999999999865 33445578899999999999999 6
Q ss_pred CCCCCceEEEEEeChHHHHHH
Q 009172 360 GGHNDVLAGSISGSGKLVTQI 380 (541)
Q Consensus 360 gg~g~v~gG~vv~~~~li~~l 380 (541)
||++ +|+++.++++.+++
T Consensus 275 GGP~---aGflavr~~~~r~l 292 (954)
T PRK05367 275 GGPH---AAYFAVRDAYKRSM 292 (954)
T ss_pred CCCC---EEEEEECHHHHhhC
Confidence 6665 89999988776655
No 287
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.56 E-value=1.2e-12 Score=140.72 Aligned_cols=290 Identities=12% Similarity=0.096 Sum_probs=174.2
Q ss_pred CCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhh------c-ccC
Q 009172 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV------L-PKM 273 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~---~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~------l-~~~ 273 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++.. .....+|+.....|++.......+ . ..+
T Consensus 79 ~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 158 (425)
T PRK07495 79 VVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGF 158 (425)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCC
Confidence 56788888999999998753 46788899999999998743 223467888888888843211111 0 001
Q ss_pred C---cEEEEeCCC----------CHHHHHHhcc----CCCeeEEEEeCCCCCCCccc-C---HHHHHHHHHhCCCEEEEE
Q 009172 274 G---ITATVIDPA----------DMEGLEAALN----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 274 G---i~v~~vd~~----------dle~Le~ai~----~~~tklV~lesp~NPtG~v~-d---i~~Ia~la~~~gillvvD 332 (541)
+ ..+.+++.. +++++++.++ .+++++|++|.....+|.+. | +++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~D 238 (425)
T PRK07495 159 GAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIAD 238 (425)
T ss_pred CCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1 123333322 1455566653 23589999998776677554 3 779999999999999999
Q ss_pred cCCCCC-Ccccc---cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH
Q 009172 333 GTFATP-LNQKA---LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL 408 (541)
Q Consensus 333 ea~a~~-~~~~~---l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~ 408 (541)
|++... ..... ...|...-+.+++|.++++ ...|++++++++.+.+...........+|..+..++..++.+..
T Consensus 239 Ev~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~G--~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~ 316 (425)
T PRK07495 239 EVQTGFARTGKLFAMEHHEVAADLTTMAKGLAGG--FPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE 316 (425)
T ss_pred chhhcCCcCCCceeecccCCCCCEEeehhhhcCC--ccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh
Confidence 996532 11111 1223333345689999854 35788889988887665322222233467777766666665532
Q ss_pred --HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------HHHHHHHHHHc
Q 009172 409 --RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTATIKFIDAL 476 (541)
Q Consensus 409 --r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~------~~~~~~~l~~L 476 (541)
..++..+..+++.+.|++ +|.+.. .+|.|.|+++++..+ ......+.+.+
T Consensus 317 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~ 378 (425)
T PRK07495 317 EDLCERANQLGNRLKQRLASLRETVPEIAD------------------IRGPGFMNAVEFNDADSGLPSAEFANRVRLKA 378 (425)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhCCCeee------------------eecCceEEEEEEecCCCCCccHHHHHHHHHHH
Confidence 223333444445554443 222222 245678999998532 12244555555
Q ss_pred CCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHhh
Q 009172 477 KIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 477 ~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlS----vG~Ed~edli~dL~~AL~~ 540 (541)
...|+-+... |...+.|||. +..++.++.++.|+++|.+
T Consensus 379 ~~~Gvl~~~~-------------------------g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~ 421 (425)
T PRK07495 379 LEKGLILLTC-------------------------GVHGNVIRFLAPITIQDDVFAEALDILEASILE 421 (425)
T ss_pred HHCCeEEeec-------------------------CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 4444333211 1113567766 4456778888888888865
No 288
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.56 E-value=3.6e-12 Score=137.76 Aligned_cols=254 Identities=15% Similarity=0.160 Sum_probs=155.9
Q ss_pred CCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc-------cC
Q 009172 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP-------KM 273 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~---~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~-------~~ 273 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++.. .....+||.....|++.....-.+-. .+
T Consensus 81 ~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~ 160 (445)
T PRK08593 81 YMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKY 160 (445)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCC
Confidence 35788899999999999853 35677799999999998742 22235788888888874321111100 01
Q ss_pred C---cEEEEeCCC----------C-------HHHHHHhcc----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhC
Q 009172 274 G---ITATVIDPA----------D-------MEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (541)
Q Consensus 274 G---i~v~~vd~~----------d-------le~Le~ai~----~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~ 325 (541)
+ ..+.+++.. + ++++++.+. .+++.+|++|.+.+..|.+.+ +++|.++|++|
T Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~ 240 (445)
T PRK08593 161 GPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH 240 (445)
T ss_pred CCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 1 112223211 1 134444442 235899999999988888876 89999999999
Q ss_pred CCEEEEEcCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHH
Q 009172 326 GAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI 399 (541)
Q Consensus 326 gillvvDea~a~~-~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~ 399 (541)
|+++|+||++... .. ........|++ +++|.++++ ..+|++++++++.+.+......+....+|..+..+
T Consensus 241 g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~--t~gK~l~~G--~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa 316 (445)
T PRK08593 241 GILFAVDDIQQGLGRTGKWSSISHFNITPDLM--SFGKSLAGG--MPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAA 316 (445)
T ss_pred CCEEEEechhhCCCcCchHHHHHhcCCCCCEe--eecccccCC--cccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHH
Confidence 9999999996432 11 11122235766 589999854 35788999998888775322223334567777766
Q ss_pred HHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------H
Q 009172 400 IRGMKTLHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------L 466 (541)
Q Consensus 400 l~~l~tl~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-------~ 466 (541)
+..++.+.. ..++..+..+++.+.|++ +|.+..| +|.|.++.+++..+ .
T Consensus 317 ~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v------------------rG~Gl~~gi~l~~~~~~~~~~~ 378 (445)
T PRK08593 317 LATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDV------------------RGYGLSIGIDIVSDKKLKTRDN 378 (445)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEE------------------eccceEEEEEEecCCCcCCCcH
Confidence 666665532 233444444555555543 3333322 56788888888521 2
Q ss_pred HHHHHHHHHcCCCce
Q 009172 467 TATIKFIDALKIPYI 481 (541)
Q Consensus 467 ~~~~~~l~~L~~~~i 481 (541)
.....+...+...|+
T Consensus 379 ~~~~~~~~~~~~~Gv 393 (445)
T PRK08593 379 EAALKICNYCFEHGV 393 (445)
T ss_pred HHHHHHHHHHHHCCe
Confidence 334556666544443
No 289
>PRK15029 arginine decarboxylase; Provisional
Probab=99.56 E-value=2.1e-13 Score=153.55 Aligned_cols=176 Identities=14% Similarity=0.139 Sum_probs=135.4
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC---
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA--- 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~--- 283 (541)
+.....+.++..|+++|++.+.+.++|+ .+|.+++++++++||.|++++++|-+.+..+ ...|+..+++.+.
T Consensus 203 p~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al----~L~ga~Pvyl~P~~~~ 278 (755)
T PRK15029 203 HTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGL----ILTGAKPVYMVPSRNR 278 (755)
T ss_pred CCcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHH----HHcCCeEEEecccccc
Confidence 4456788999999999999999999998 7899999999999999999999999877543 3447777777531
Q ss_pred -------C-----HHHHHHhccCC-Cee--------EEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC---
Q 009172 284 -------D-----MEGLEAALNNN-NVS--------LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL--- 339 (541)
Q Consensus 284 -------d-----le~Le~ai~~~-~tk--------lV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~--- 339 (541)
+ ++.++++|+.+ .+| ++++.+|+ ..|.+.|+++|+++||++|++|+|||+++..+
T Consensus 279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~ 357 (755)
T PRK15029 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFN 357 (755)
T ss_pred cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHHHHHHHhcCCeEEEECccccccccC
Confidence 3 78888888543 134 89997777 67999999999999999999999999976533
Q ss_pred ---cc-ccc-----c-cCCc-EEEECCccccCCCCCceEEEEEeChH--H--HHHHHHHhhhcCCC
Q 009172 340 ---NQ-KAL-----S-LGAD-LVLHSATKFIGGHNDVLAGSISGSGK--L--VTQIRNLHHVLGGA 390 (541)
Q Consensus 340 ---~~-~~l-----~-~gaD-ivv~S~sK~lgg~g~v~gG~vv~~~~--l--i~~l~~~~~~~g~~ 390 (541)
+. .++ . .|+| +++.|+||.+++.. .+.++-.+.. . .++++.....+.++
T Consensus 358 ~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alT--QaS~LHv~~~~~~id~~r~~~~l~~~qST 421 (755)
T PRK15029 358 PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATT 421 (755)
T ss_pred ccccccccccccccccCCCceEEEEchhhcccchh--hhhhheeCCCccccCHHHHHHHHHHHcCC
Confidence 11 223 3 6898 99999999999765 4556554332 2 25666666655544
No 290
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.56 E-value=2.8e-12 Score=138.68 Aligned_cols=288 Identities=16% Similarity=0.145 Sum_probs=173.4
Q ss_pred CCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc-----cCC--
Q 009172 207 YGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP-----KMG-- 274 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~---~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~-----~~G-- 274 (541)
..++...+|.++|+++.+. +.+++++||++|+..+++.. ....++||.....|++.....-.+-. ..+
T Consensus 96 ~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~ 175 (443)
T PRK06058 96 TPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFG 175 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccC
Confidence 4577888999999998753 46788999999999998722 22347899999999885422211100 001
Q ss_pred ---cEEEEeC---C-CC---------------HHHHHHhccCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCE
Q 009172 275 ---ITATVID---P-AD---------------MEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (541)
Q Consensus 275 ---i~v~~vd---~-~d---------------le~Le~ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gil 328 (541)
..+..++ . .+ ++.+++.+..+++.+|++|......|.+.| +++|.++|++||++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gil 255 (443)
T PRK06058 176 PFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVV 255 (443)
T ss_pred CCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 0111111 0 11 233444444346899999877655566654 88999999999999
Q ss_pred EEEEcCCCCCC-c-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHh
Q 009172 329 VCIDGTFATPL-N-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (541)
Q Consensus 329 lvvDea~a~~~-~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~ 402 (541)
+|.||++.... . ......-.|+++ ++|.++++ ...|++++++++.+.+...........+|..+.+++..
T Consensus 256 lI~DEV~tGfgRtG~~fa~~~~gv~PDiv~--~gK~l~~G--~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~ 331 (443)
T PRK06058 256 FIADEVQTGFARTGAWFACEHEGIVPDLIT--TAKGIAGG--LPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAA 331 (443)
T ss_pred EEEeccccCCCcChhhhHHHhcCCCCCEEE--EcccccCC--CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHH
Confidence 99999965321 1 111223358887 47999854 45778888888877765332222223467777777777
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------HHHHH
Q 009172 403 MKTLHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTATI 470 (541)
Q Consensus 403 l~tl~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~------~~~~~ 470 (541)
|+.+.. -.++..+..+++.+.|++ ++.+.. .+|.|.|+.+++..+ .+...
T Consensus 332 L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrg~G~~~~i~~~~~~~~~~~~~~~~ 393 (443)
T PRK06058 332 IETIEEDDLVARARQIEALMTDRLRALAAEDDRIGD------------------VRGRGAMIAIELVKPGTTEPDAELTK 393 (443)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEe------------------eeccceEEEEEEecCCCCCCcHHHHH
Confidence 766532 123333334455555543 222222 256788999998532 23455
Q ss_pred HHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhhC
Q 009172 471 KFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALHAI 541 (541)
Q Consensus 471 ~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG----~Ed~edli~dL~~AL~~i 541 (541)
.+++.+...++.+..++. ..+.||+..- .++.++.++.|+++|+++
T Consensus 394 ~l~~~~~~~Gv~~~~~~~-------------------------~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 394 ALAAAAHAAGVIVLTCGT-------------------------YGNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred HHHHHHHHCCeEEeccCC-------------------------CCCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 666666555554433211 1246777543 356677777777777653
No 291
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.56 E-value=4.1e-12 Score=136.43 Aligned_cols=288 Identities=15% Similarity=0.139 Sum_probs=172.0
Q ss_pred CCCCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhc-----ccC
Q 009172 204 YGRYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL-----PKM 273 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~---~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l-----~~~ 273 (541)
+....++...+|.++|+++... +.+++++||++|+..+++.. .....+||.....|++.....-.+- ...
T Consensus 70 ~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~ 149 (420)
T TIGR00700 70 FMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKS 149 (420)
T ss_pred ccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCccccc
Confidence 3445677788999999998742 56888999999999998732 2233578888888888532221110 011
Q ss_pred Cc-----EEEEeCCC----------------CHHHHHHhcc----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHh
Q 009172 274 GI-----TATVIDPA----------------DMEGLEAALN----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (541)
Q Consensus 274 Gi-----~v~~vd~~----------------dle~Le~ai~----~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~ 324 (541)
+. .+..++.. +++.+++.+. ++++.+|++|.....+|.+++ +++|.++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~ 229 (420)
T TIGR00700 150 GFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCRE 229 (420)
T ss_pred CCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHH
Confidence 11 12222210 2456666652 235899999999888888776 8899999999
Q ss_pred CCCEEEEEcCCCCCCc------ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHH
Q 009172 325 KGAIVCIDGTFATPLN------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 398 (541)
Q Consensus 325 ~gillvvDea~a~~~~------~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l 398 (541)
||+++|+||++..... ........|+++ ++|.+++ | ...|++++++++.+.+...........+|..+.+
T Consensus 230 ~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aa 305 (420)
T TIGR00700 230 HGIVFIADEVQTGFARTGAMFACEHEGPEPDLIT--TAKSLAD-G-LPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAA 305 (420)
T ss_pred cCCEEEEEecccCCcccchhHHHhhcCCCCCEEE--eeccccC-C-cceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHH
Confidence 9999999999764311 112223356654 8999994 3 4678899998888776532222222345677666
Q ss_pred HHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC------CH
Q 009172 399 IIRGMKTLHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG------DL 466 (541)
Q Consensus 399 ~l~~l~tl~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g------~~ 466 (541)
++..++.+.. ..++..+..+++.+.|++ +|.+..+ ++.|.++++++.. +.
T Consensus 306 a~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v------------------rg~G~~~~i~~~~~~~~~~~~ 367 (420)
T TIGR00700 306 ALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDV------------------RGLGAMIAVELVDPGTTEPDA 367 (420)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEe------------------eccceEEEEEEecCCCCCccH
Confidence 6555554321 112222333334444432 3333222 3467899998832 12
Q ss_pred HHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHH
Q 009172 467 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQAL 538 (541)
Q Consensus 467 ~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL 538 (541)
+....+++.+...++.+..|+. ..+.|||+..+ ++.++.++.|.++|
T Consensus 368 ~~~~~l~~~~~~~Gv~i~p~~~-------------------------f~~~lRl~p~l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 368 GLAERIATAAHAAGLLLLTCGM-------------------------FGNIIRFLPPLTIGDELLSEGLDILCAIL 418 (420)
T ss_pred HHHHHHHHHHHHCCeEEeccCC-------------------------CCCEEEEECCCCcCHHHHHHHHHHHHHHh
Confidence 3456677666555655443321 13689999765 23444455555544
No 292
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.55 E-value=3.1e-12 Score=137.05 Aligned_cols=285 Identities=14% Similarity=0.067 Sum_probs=165.9
Q ss_pred CCchhHHHHHHHHHHHh--C--CC-cEEEe-CCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhh------ccc
Q 009172 207 YGNPTTVVVEEKMSALE--G--AE-STVIM-ASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETV------LPK 272 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~--g--~~-~~i~~-sSG~~Ai~~al~all--~~GD~VIv~~~~y~~~~~~~~~~------l~~ 272 (541)
+.++...+|.++|+++. + .. ..+++ +||++|+..+++... ....+||.....|++.....-.. -..
T Consensus 75 ~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~ 154 (412)
T TIGR02407 75 MATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQG 154 (412)
T ss_pred cCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccC
Confidence 35677788889998874 2 22 34554 799999999987432 23468888888888854222111 011
Q ss_pred CC---cEEEEeCC--------CCHHHHHHhccC-----CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEE
Q 009172 273 MG---ITATVIDP--------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 273 ~G---i~v~~vd~--------~dle~Le~ai~~-----~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvD 332 (541)
++ ..+.+++. .+++.+++.+.+ +++.+|++|...++.|.+.+ +++|.++|++||+++|+|
T Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 234 (412)
T TIGR02407 155 AGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVD 234 (412)
T ss_pred CCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 12 12333433 246778887752 24789999999999998543 789999999999999999
Q ss_pred cCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHH-
Q 009172 333 GTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKT- 405 (541)
Q Consensus 333 ea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~t- 405 (541)
|++... +.........|+++ ++|.+++.| ...|++++++++ +.+...........++..+..+...++.
T Consensus 235 EV~tG~GRtG~~~a~~~~~v~PDi~~--~~K~lg~~G-~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~ 310 (412)
T TIGR02407 235 DIQAGCGRTGTFFSFEPAGIEPDIVC--LSKSISGYG-LPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYY 310 (412)
T ss_pred chhhCCCccchhHHhcccCCCCCEEE--echhccCCc-cceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHH
Confidence 997521 11222344568776 679998744 456788887765 4332111111112345555544445553
Q ss_pred HHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC
Q 009172 406 LHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP 479 (541)
Q Consensus 406 l~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~ 479 (541)
+.. ..++..+..+++.+.|+. ++.+. . ..+|.|.+++++++.. +....+...+...
T Consensus 311 i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~-~----------------~vrg~Gl~~~l~l~~~-~~~~~~~~~~~~~ 372 (412)
T TIGR02407 311 WSDDAFEKAVQRKSEIIQERLDRIVAEYPELI-K----------------QVRGRGLMQGIECGDG-DLAGKIAKAAFEN 372 (412)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHhhCCCce-E----------------eeecceeEEEEEecCh-HHHHHHHHHHHHC
Confidence 221 122223333444444432 22110 0 1245788999999743 4456677776655
Q ss_pred ceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 480 YIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 480 ~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
++.+... +..++.|||+..+-.+++.++.+.++|
T Consensus 373 Gv~v~~~-------------------------~~~~~~lr~~p~l~~t~~~i~~~~~~l 406 (412)
T TIGR02407 373 GLIIETS-------------------------GPNDEVIKLLPPLTIDEETLQQGLDIL 406 (412)
T ss_pred CCEEecc-------------------------CCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 5444321 112467898887654444444444443
No 293
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.55 E-value=5e-12 Score=135.81 Aligned_cols=289 Identities=15% Similarity=0.158 Sum_probs=176.1
Q ss_pred CCCCCchhHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc-----c-
Q 009172 204 YGRYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP-----K- 272 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g---~~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~-----~- 272 (541)
+..+.++...+|.++|+++.+ .+.+++++||++|+..+++.. .....+|+.....|++.....-.+-. +
T Consensus 77 ~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~ 156 (421)
T PRK06777 77 YQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKV 156 (421)
T ss_pred ccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCccccc
Confidence 344567888899999999865 257888999999999998733 22335788888888885432211100 0
Q ss_pred -CC---cEEEEeCC----------CCHHHHHHhcc----CCCeeEEEEeCCCCCCCcc-cC---HHHHHHHHHhCCCEEE
Q 009172 273 -MG---ITATVIDP----------ADMEGLEAALN----NNNVSLFFTESPTNPFLRC-VD---VKLVSDLCHKKGAIVC 330 (541)
Q Consensus 273 -~G---i~v~~vd~----------~dle~Le~ai~----~~~tklV~lesp~NPtG~v-~d---i~~Ia~la~~~gillv 330 (541)
++ -.+..++. .+++.+++.++ ++++.+|++|...+..|.. .| +++|.++|++||+++|
T Consensus 157 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI 236 (421)
T PRK06777 157 GFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLI 236 (421)
T ss_pred CCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 00 01111211 12566777764 2358999999998888854 45 8899999999999999
Q ss_pred EEcCCCCC-Ccc-----cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHH
Q 009172 331 IDGTFATP-LNQ-----KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMK 404 (541)
Q Consensus 331 vDea~a~~-~~~-----~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~ 404 (541)
+||++... ... .....-.|++ +++|.+++ | ...|++++++++++.+...........++..+.+++..|+
T Consensus 237 ~DEv~tg~gr~g~~~~~~~~~~~pDiv--~~sK~l~~-G-~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 312 (421)
T PRK06777 237 ADEVQTGFARTGKLFAMEYYDVKPDLI--TMAKSLGG-G-MPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLD 312 (421)
T ss_pred EechhhCCccCCchhhhhhcCCCCCEE--eeehhhcC-C-CceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99997632 111 1112235766 58999984 3 4578888998888776543222222346777777666776
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC------HHHHHHH
Q 009172 405 TLHL--RVQQQNSTALRMAEILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD------LTATIKF 472 (541)
Q Consensus 405 tl~~--r~~~~~~na~~la~~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~------~~~~~~~ 472 (541)
.+.. ..++..+..+++.+.|++. |.+.. .+|.|.|+.+++... .+....+
T Consensus 313 ~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrg~G~~~~i~~~~~~~~~~~~~~~~~l 374 (421)
T PRK06777 313 VIAEEKLCQRALILGAHLVEVLEKAKASCPAIVD------------------IRARGSMVAVEFNDPQTGKPSPEFTRQY 374 (421)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEE------------------ecCceEEEEEEEecCccCCccHHHHHHH
Confidence 5432 2334445555566655542 22222 245788888877531 1234555
Q ss_pred HHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009172 473 IDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 473 l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~ 539 (541)
...+...++.+..++. ..+.|||+..+ |+.++.++.|+++|.
T Consensus 375 ~~~~~~~Gv~i~~~~~-------------------------~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 375 QRQALEEGLLLLSCGV-------------------------HGNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred HHHHHhCCeEEeecCC-------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 5555445555443321 12578888754 455566666666553
No 294
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.54 E-value=2.6e-12 Score=136.43 Aligned_cols=289 Identities=16% Similarity=0.149 Sum_probs=178.2
Q ss_pred CCCCCc-hhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchH-HHHHhh---c---
Q 009172 204 YGRYGN-PTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTR-IFIETV---L--- 270 (541)
Q Consensus 204 Y~R~~~-p~~~~Le~~LA~l~g~---~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~-~~~~~~---l--- 270 (541)
-.++.. +...++.++|.++... +.+++++||++|+.++++.. ...+..||.....|++.. ..+... .
T Consensus 92 ~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~ 171 (447)
T COG0160 92 HTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYK 171 (447)
T ss_pred cCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccc
Confidence 334433 7778888888888764 46888899999999999742 223467888888887732 222110 0
Q ss_pred ---ccCCcEEEEeCCC-----------------CHHHHHHhcc-----CCCeeEEEEeCCCCCCCcccC----HHHHHHH
Q 009172 271 ---PKMGITATVIDPA-----------------DMEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (541)
Q Consensus 271 ---~~~Gi~v~~vd~~-----------------dle~Le~ai~-----~~~tklV~lesp~NPtG~v~d----i~~Ia~l 321 (541)
..+.-.+..++.. ..+.++..+. +.++.++++|......|.+.+ ++++.++
T Consensus 172 ~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~ 251 (447)
T COG0160 172 AGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKL 251 (447)
T ss_pred cCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHH
Confidence 1111123333311 1234555442 225899999999999998876 7899999
Q ss_pred HHhCCCEEEEEcCCCC----C--CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHH
Q 009172 322 CHKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNA 395 (541)
Q Consensus 322 a~~~gillvvDea~a~----~--~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~ 395 (541)
|++||+++|+||++.. + +.+.....-.||++ ++|.+++ | ...|.+++++++.+ ...-.......-+|..
T Consensus 252 ~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt--~aK~ig~-G-~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpva 326 (447)
T COG0160 252 CREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVT--LAKSLGG-G-LPLSAVVGRAEIMD-WPPGGHGGTFGGNPVA 326 (447)
T ss_pred HHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEE--ecccccC-C-CceeEEeccHHhcc-cCCcccCCCCCcCHHH
Confidence 9999999999999753 2 22233333468887 8899997 3 45788888888776 3321111112336777
Q ss_pred HHHHHHhHHHHHHH--HHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-----
Q 009172 396 AYLIIRGMKTLHLR--VQQQNSTALRMAEILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----- 464 (541)
Q Consensus 396 a~l~l~~l~tl~~r--~~~~~~na~~la~~L~----~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g----- 464 (541)
+..++..|+.++.. +++..+.-+++.+.|. ++|.|..| +|.|.|+.+++..
T Consensus 327 ~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdV------------------RG~Glm~giE~v~d~~t~ 388 (447)
T COG0160 327 CAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDV------------------RGLGLMIGVELVKDRDTK 388 (447)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecc------------------cccceEEEEEEecCCCCC
Confidence 77766666655432 2222233333444443 23433332 6788899999863
Q ss_pred --CHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEe----cCCCHHHHHHHHHHHH
Q 009172 465 --DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF----GVEDFEDLKADVLQAL 538 (541)
Q Consensus 465 --~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv----G~Ed~edli~dL~~AL 538 (541)
+.+.+.++++.+...++-+... |...+.|||.. ..|+.+..++.|+++|
T Consensus 389 ~p~~~~~~~i~~~~~~~Glil~~~-------------------------G~~~nviRi~PPL~is~e~~d~~l~il~~al 443 (447)
T COG0160 389 EPDAELAAKIVARAFERGLLLLTC-------------------------GPHGNVLRILPPLTISDEELDEGLDILEEAL 443 (447)
T ss_pred CCCHHHHHHHHHHHHHcCCEEecc-------------------------CCCCcEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 2356677777766555432221 23356777664 3467788888888888
Q ss_pred hh
Q 009172 539 HA 540 (541)
Q Consensus 539 ~~ 540 (541)
..
T Consensus 444 ~~ 445 (447)
T COG0160 444 KE 445 (447)
T ss_pred Hh
Confidence 64
No 295
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.54 E-value=1.4e-12 Score=150.67 Aligned_cols=163 Identities=18% Similarity=0.226 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh-ccCC--CEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCH
Q 009172 211 TTVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-VPAG--GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~al-l~~G--D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dl 285 (541)
...++++.|+++.|.+ ++-++.+++++.+++++++ +++| |+|++++.+|+.+...+...++..|++++.++..+.
T Consensus 149 al~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~ 228 (993)
T PLN02414 149 SLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF 228 (993)
T ss_pred HHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh
Confidence 3566789999999984 5777888888888777666 4544 789999999999998888778889999999876432
Q ss_pred HHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCC--CCcccccccCCcEEEECCccccCCCC
Q 009172 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLVLHSATKFIGGHN 363 (541)
Q Consensus 286 e~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~--~~~~~~l~~gaDivv~S~sK~lgg~g 363 (541)
+ ...+ .+..+++..|+ .+|.+.|+++|+++||++|+++++ .+... .....|-++|+||++.+.+||.++.|
T Consensus 229 ~----~~~~-~v~~vlvq~P~-~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G 301 (993)
T PLN02414 229 D----YSSG-DVCGVLVQYPA-TDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMG 301 (993)
T ss_pred c----cccC-ceEEEEEecCC-CCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCC
Confidence 2 2222 35566665554 599999999999999999999999 44322 11225778999999999999983222
Q ss_pred --CceEEEEEeChHHHHHH
Q 009172 364 --DVLAGSISGSGKLVTQI 380 (541)
Q Consensus 364 --~v~gG~vv~~~~li~~l 380 (541)
+--+|+++.++++.+.+
T Consensus 302 ~GGP~aGflavr~~~~r~~ 320 (993)
T PLN02414 302 YGGPHAAFLATSQEYKRLM 320 (993)
T ss_pred CCCCCeeEEEECHHHHhhC
Confidence 11268999888765543
No 296
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.53 E-value=2.9e-12 Score=138.48 Aligned_cols=288 Identities=12% Similarity=0.151 Sum_probs=172.5
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc------c-C-CCEEEEcCCCCcchHHH-H--------H
Q 009172 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV------P-A-GGHIVTTTDCYRKTRIF-I--------E 267 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all------~-~-GD~VIv~~~~y~~~~~~-~--------~ 267 (541)
+.++...+|.++|+++.+. +.+++++||++|+..+++... . + ..+||.....|++.... + .
T Consensus 89 ~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~ 168 (445)
T PRK09221 89 MGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNR 168 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhh
Confidence 5678888999999998753 578899999999999886432 1 1 35788888888874211 1 0
Q ss_pred hhcccCCcEEEEeCCC------------------CHHHHHHhcc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHH
Q 009172 268 TVLPKMGITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 268 ~~l~~~Gi~v~~vd~~------------------dle~Le~ai~---~~~tklV~lesp~NPtG~v~d----i~~Ia~la 322 (541)
.........+..++.. ..+++++.++ .+++.+|++|......|.+.| +++|.++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc 248 (445)
T PRK09221 169 KMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREIC 248 (445)
T ss_pred hccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHH
Confidence 0000001112222211 1346666664 235889999999988899888 99999999
Q ss_pred HhCCCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-------hhhcCC
Q 009172 323 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGG 389 (541)
Q Consensus 323 ~~~gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~-------~~~~g~ 389 (541)
+++|+++|+||++... +..+....-.|+++ ++|.++++. ...|.+++++++.+.+... ......
T Consensus 249 ~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 325 (445)
T PRK09221 249 DKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIIT--FAKGLTNGA-IPMGAVIASDEIYDAFMQGPEYAIEFFHGYTY 325 (445)
T ss_pred HHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEE--eccccccCc-ccceeeEEcHHHHHhhccCcccccccccccCC
Confidence 9999999999996421 11122222347765 789997642 1246677888887766421 111122
Q ss_pred CccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC--
Q 009172 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-- 465 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-- 465 (541)
..+|..+..++..|+.+.. ..++..+..+++.+.|++... +|.+ ...+|.|.++.+++...
T Consensus 326 ~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~-----~~~v----------~~vrg~Gl~~~v~~~~~~~ 390 (445)
T PRK09221 326 SAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLKG-----LPHV----------IDIRNIGLVAGIELAPRPG 390 (445)
T ss_pred CcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcc-----CCCE----------EEEecCceEEEEEEecccc
Confidence 2467777766666666532 234444555556665554311 1211 12356788888888531
Q ss_pred --HHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009172 466 --LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 466 --~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~ 539 (541)
...+.++.+.+...++-+..+ .+.|||+.-+ ++++.+++.|+++|.
T Consensus 391 ~~~~~~~~~~~~~~~~Gv~~~~~----------------------------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~ 442 (445)
T PRK09221 391 APGARGYEAFMKCFEKGLLVRYT----------------------------GDTIALSPPLIIEKAQIDELVDALGDALR 442 (445)
T ss_pred cccchHHHHHHHHHHCCeEEeec----------------------------CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 122345555554444333211 2467777443 566777777777776
Q ss_pred h
Q 009172 540 A 540 (541)
Q Consensus 540 ~ 540 (541)
+
T Consensus 443 ~ 443 (445)
T PRK09221 443 A 443 (445)
T ss_pred h
Confidence 4
No 297
>PRK06105 aminotransferase; Provisional
Probab=99.53 E-value=3.9e-12 Score=138.04 Aligned_cols=242 Identities=14% Similarity=0.162 Sum_probs=151.7
Q ss_pred CCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc------c-C-CCEEEEcCCCCcchHHHHHhh----
Q 009172 204 YGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV------P-A-GGHIVTTTDCYRKTRIFIETV---- 269 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all------~-~-GD~VIv~~~~y~~~~~~~~~~---- 269 (541)
++++.++...+|.++|+++.+. +.+++++||++|+.++++... . + ..+||.....|++.......+
T Consensus 86 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~ 165 (460)
T PRK06105 86 FSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLP 165 (460)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCc
Confidence 4456788889999999999754 567888999999999987531 1 2 357888888888743211000
Q ss_pred --cccCCc---EEEEeCCC------------------CHHHHHHhcc---CCCeeEEEEeCCCCCCCcccC----HHHHH
Q 009172 270 --LPKMGI---TATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVS 319 (541)
Q Consensus 270 --l~~~Gi---~v~~vd~~------------------dle~Le~ai~---~~~tklV~lesp~NPtG~v~d----i~~Ia 319 (541)
.+.++. .+..++.. ..+++++++. .+++.+|++|......|.+.+ +++|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr 245 (460)
T PRK06105 166 NNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQ 245 (460)
T ss_pred ccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 001111 12222211 1355676663 235899999998887888877 89999
Q ss_pred HHHHhCCCEEEEEcCCCC-CC-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-------hh
Q 009172 320 DLCHKKGAIVCIDGTFAT-PL-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-------HV 386 (541)
Q Consensus 320 ~la~~~gillvvDea~a~-~~-----~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~-------~~ 386 (541)
++|++||+++|+||++.. +. .......-.||++ ++|.++++. ...|++++++++.+.+.... ..
T Consensus 246 ~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~--~gK~lggG~-~P~~av~~~~~i~~~~~~~~~~~~~~~h~ 322 (460)
T PRK06105 246 AVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILV--MSKQLSSSY-QPLSAVLMNEKVYDPIADESGKIGTFGHG 322 (460)
T ss_pred HHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeee--eecccccCc-ccceEEEEcHHHHHHHhcccccCcccccC
Confidence 999999999999999632 11 1222233467775 889998642 23678888888887765321 11
Q ss_pred cCCCccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009172 387 LGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 387 ~g~~~s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
.....+|..+..++..|+.+.. .+++..+..+++.+.|++.. + +|.. .+.+|.|.|+.|++.
T Consensus 323 ~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l~---~--~~~v----------~~vrG~Gl~~gie~~ 386 (460)
T PRK06105 323 FTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRALA---D--HPLV----------GEVRGVGLIAAVELV 386 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhh---c--CCCe----------EEEEecceEEEEEEe
Confidence 1223567777777777776653 23444444455555554321 1 1210 123568889999985
No 298
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.53 E-value=3.5e-12 Score=137.20 Aligned_cols=291 Identities=16% Similarity=0.101 Sum_probs=167.6
Q ss_pred CCchhHHHHHHHHHHHhC----CC-cEEEe-CCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhh------ccc
Q 009172 207 YGNPTTVVVEEKMSALEG----AE-STVIM-ASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV------LPK 272 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g----~~-~~i~~-sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~------l~~ 272 (541)
+.++...+|.++|+++.. .. ..+++ +||++|+..+++.. .....+||.....|++.....-.. ...
T Consensus 79 ~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~ 158 (425)
T PRK09264 79 MHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQG 158 (425)
T ss_pred cCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccC
Confidence 456778889899988742 23 34454 69999999998743 223467888888888843211111 011
Q ss_pred CCc---EEEEeCC--------CCHHHHHHhccC-----CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEE
Q 009172 273 MGI---TATVIDP--------ADMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 273 ~Gi---~v~~vd~--------~dle~Le~ai~~-----~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvD 332 (541)
++. .+..++. .|++++++.+++ +++.+|++|......|.+.+ +++|.++|++||+++|+|
T Consensus 159 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (425)
T PRK09264 159 AGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVD 238 (425)
T ss_pred CCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEe
Confidence 111 2334433 367788888752 24789999999887786553 889999999999999999
Q ss_pred cCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHH
Q 009172 333 GTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL 406 (541)
Q Consensus 333 ea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl 406 (541)
|++... +.........|+++ ++|.+++.| ...|++++++++ ..+...........+|..+..++..++.+
T Consensus 239 EV~tG~GrtG~~~~~~~~~v~PDi~t--~~K~l~~~G-~pigav~~~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~ 314 (425)
T PRK09264 239 DIQAGCGRTGTFFSFERAGITPDIVT--LSKSISGYG-LPMALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEY 314 (425)
T ss_pred chhhCCccccHHHHHhhcCCCCCEEE--eccccCCCc-cceEEEEEchhh-hccCCCccCCCCCCCHHHHHHHHHHHHHH
Confidence 997531 11222234467765 679998755 346777777765 33321111111122444544444455221
Q ss_pred -H--HHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceee
Q 009172 407 -H--LRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 483 (541)
Q Consensus 407 -~--~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iav 483 (541)
. ...++..++.+++.+.|++... .+|.+ ....+|.|.+++++++. .+....+...+...|+-+
T Consensus 315 ~~~~~l~~~~~~~g~~l~~~l~~l~~----~~~~~---------~~~vrg~Gl~~~i~l~~-~~~~~~l~~~~~~~Gv~~ 380 (425)
T PRK09264 315 WSDDAFEKEVKAKGELVRERLEEIAA----KYPGL---------GAEVRGRGMMQGIDFGD-GELAGKIAAEAFENGLII 380 (425)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHH----hCCCc---------eecceecccEEEEEecC-hHHHHHHHHHHHHCCCEE
Confidence 1 1233334445555555543211 11111 01124568889999964 344566666665545433
Q ss_pred cCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhh
Q 009172 484 SFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALHA 540 (541)
Q Consensus 484 S~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG----~Ed~edli~dL~~AL~~ 540 (541)
... +.....|||+.. .++.++.++.|.++|++
T Consensus 381 ~~~-------------------------~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 381 ETS-------------------------GPEDEVVKLLPPLTIDEEELEEGLDILEEAVAE 416 (425)
T ss_pred ecc-------------------------CCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 221 112367888866 35566667777776653
No 299
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.53 E-value=7.9e-12 Score=136.95 Aligned_cols=203 Identities=17% Similarity=0.163 Sum_probs=132.4
Q ss_pred EEEeCCHHHHHHHHHHHh----cc----------------------CCCEEEEcCCCCcchHHHHHhhcccCCc---EEE
Q 009172 228 TVIMASGMSASTVMLLAL----VP----------------------AGGHIVTTTDCYRKTRIFIETVLPKMGI---TAT 278 (541)
Q Consensus 228 ~i~~sSG~~Ai~~al~al----l~----------------------~GD~VIv~~~~y~~~~~~~~~~l~~~Gi---~v~ 278 (541)
.+++++|++|+..++.+- ++ ++.+|+++...|.+..... ...|+ .++
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa----~~lglg~~~v~ 237 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAA----DVLGIGRDNLI 237 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHH----HHcCCCcccEE
Confidence 577888898887776532 11 2357999999998866443 33344 444
Q ss_pred EeCC-----CCHHHHHHhccC---CCeeEEEEe--CCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccc-----
Q 009172 279 VIDP-----ADMEGLEAALNN---NNVSLFFTE--SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA----- 343 (541)
Q Consensus 279 ~vd~-----~dle~Le~ai~~---~~tklV~le--sp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~----- 343 (541)
.++. .|+++|+++|++ .+++.+++. ..++.+|.+.|+++|+++|+++|++++||.+|+......+
T Consensus 238 ~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~ 317 (522)
T TIGR03799 238 AIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHL 317 (522)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHH
Confidence 4442 378999988852 135555444 4566899999999999999999999999999886543222
Q ss_pred c-c-cCCcEEEECCccccCCCCCceEEEEEe-ChHHHHHHHH---Hhh-----------hcCCCcc-HHHHHHHHHhH--
Q 009172 344 L-S-LGADLVLHSATKFIGGHNDVLAGSISG-SGKLVTQIRN---LHH-----------VLGGALN-PNAAYLIIRGM-- 403 (541)
Q Consensus 344 l-~-~gaDivv~S~sK~lgg~g~v~gG~vv~-~~~li~~l~~---~~~-----------~~g~~~s-~~~a~l~l~~l-- 403 (541)
+ . .++|.++.|.||++.++-+ .|+++. ++++.+.+.. +.. .-|+... ....|.+++.+
T Consensus 318 l~gle~aDSit~d~HK~l~~P~g--~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~ 395 (522)
T TIGR03799 318 LKGIERADSVTIDAHKQLYVPMG--AGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGR 395 (522)
T ss_pred hcCchhCCEEEEChhhcCCcCcc--cEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhH
Confidence 1 2 2689999999997766642 466655 4455444432 110 0011111 12345544443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCC
Q 009172 404 KTLHLRVQQQNSTALRMAEILEAHPKVKRVHYP 436 (541)
Q Consensus 404 ~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~P 436 (541)
+.+...+++..+.++++.+.|++.|.++-+..|
T Consensus 396 ~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p 428 (522)
T TIGR03799 396 KGYELLIDQSIEKAKYFADLIQQQPDFELVTEP 428 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC
Confidence 345666778889999999999999887655433
No 300
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.53 E-value=5.9e-12 Score=137.79 Aligned_cols=288 Identities=14% Similarity=0.136 Sum_probs=172.2
Q ss_pred CCchhHHHHHHHHHHHhC-C--CcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCCcchHHHHHhhc-----
Q 009172 207 YGNPTTVVVEEKMSALEG-A--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTRIFIETVL----- 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g-~--~~~i~~sSG~~Ai~~al~all-------~~G-D~VIv~~~~y~~~~~~~~~~l----- 270 (541)
..++...+|.++|.+++. . +.+++++||++|+..+++... .+| .+||..+..|++.......+-
T Consensus 130 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~ 209 (504)
T PLN02760 130 RTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPAL 209 (504)
T ss_pred cCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhh
Confidence 456778899999988853 3 357889999999999987542 123 578888888888532110000
Q ss_pred -ccCCc---EEEEeCCC----------C--------HHHHHHhcc---CCCeeEEEEeCCCCCCCcccC----HHHHHHH
Q 009172 271 -PKMGI---TATVIDPA----------D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (541)
Q Consensus 271 -~~~Gi---~v~~vd~~----------d--------le~Le~ai~---~~~tklV~lesp~NPtG~v~d----i~~Ia~l 321 (541)
..++. .+..++.. + .+++++++. ++++.+|++|......|.+.| +++|.++
T Consensus 210 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~l 289 (504)
T PLN02760 210 HQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAV 289 (504)
T ss_pred ccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 01111 02222210 1 134666663 235889999999888898888 9999999
Q ss_pred HHhCCCEEEEEcCCCC-CC-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-----hhcCC-
Q 009172 322 CHKKGAIVCIDGTFAT-PL-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGG- 389 (541)
Q Consensus 322 a~~~gillvvDea~a~-~~-----~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~-----~~~g~- 389 (541)
|++||+++|+||++.. +- .......-.|+++ ++|.++++. ...|.+++++++.+.+.... ..++.
T Consensus 290 c~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivt--lgK~lggG~-~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T 366 (504)
T PLN02760 290 LKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVS--LAKALSSAY-MPIGAVLVSPEISDVIHSQSNKLGSFAHGFT 366 (504)
T ss_pred HHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEE--ecccccCCc-cccceEeecHHHHhhhhcccccccCcccCCC
Confidence 9999999999999632 11 1222223367765 799998642 12456778888888765310 01122
Q ss_pred -CccHHHHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH
Q 009172 390 -ALNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL 466 (541)
Q Consensus 390 -~~s~~~a~l~l~~l~tl~~r--~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~ 466 (541)
..+|..+..++..|+.+... .++..+..+++.+.|++. .+ +|.. ...+|.|.|+.+++..+.
T Consensus 367 ~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l---~~--~~~v----------~~vrG~Gl~~gie~~~~~ 431 (504)
T PLN02760 367 YSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAF---SG--SPII----------GEIRGTGLILGTEFVDNK 431 (504)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH---hc--CCCe----------eeEEeCceEEEEEEecCC
Confidence 23678887777777766432 334444455555555442 10 1110 123578889999985321
Q ss_pred ----------HHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEe----cCCCHHHHHH
Q 009172 467 ----------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF----GVEDFEDLKA 532 (541)
Q Consensus 467 ----------~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv----G~Ed~edli~ 532 (541)
+....+.+.+...|+-+... .+.|||+. ..++++.+++
T Consensus 432 ~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------------------------g~~lrl~Ppl~it~eeid~~~~ 483 (504)
T PLN02760 432 SPNDPFPAEWGVGAYFGAECKKRGMLVRVA----------------------------GDNIMMSPPLIITPEEVDELIS 483 (504)
T ss_pred cccccccchhHHHHHHHHHHHhCCcEEEec----------------------------CCEEEEECCCCCCHHHHHHHHH
Confidence 12444555554444322211 13567773 3467777777
Q ss_pred HHHHHHhh
Q 009172 533 DVLQALHA 540 (541)
Q Consensus 533 dL~~AL~~ 540 (541)
.|+++|..
T Consensus 484 ~l~~al~~ 491 (504)
T PLN02760 484 IYGKALKA 491 (504)
T ss_pred HHHHHHHH
Confidence 77777754
No 301
>PRK05965 hypothetical protein; Provisional
Probab=99.53 E-value=6.1e-12 Score=136.47 Aligned_cols=289 Identities=16% Similarity=0.170 Sum_probs=174.1
Q ss_pred CCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHHHHhh------c
Q 009172 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETV------L 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g--~~~~i~~sSG~~Ai~~al~all~-------~-GD~VIv~~~~y~~~~~~~~~~------l 270 (541)
+.++...+|.++|+++.. .+.+++++||++|+..+++.... + ..+||.....|++........ -
T Consensus 87 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~ 166 (459)
T PRK05965 87 FGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFH 166 (459)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhh
Confidence 457778899999999874 35677778999999999874321 2 357898888988853211011 0
Q ss_pred ccCCc---EEEEeCC---------CC--------HHHHHHhccC---CCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009172 271 PKMGI---TATVIDP---------AD--------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 271 ~~~Gi---~v~~vd~---------~d--------le~Le~ai~~---~~tklV~lesp~NPtG~v~d----i~~Ia~la~ 323 (541)
..++. .+..++. .| ++++++.+.. +++.+|++|......|.+.+ +++|.++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~ 246 (459)
T PRK05965 167 RGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACR 246 (459)
T ss_pred cccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHH
Confidence 01111 1122211 12 2567777742 35899999998877787665 789999999
Q ss_pred hCCCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-----hhcCC--C
Q 009172 324 KKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGG--A 390 (541)
Q Consensus 324 ~~gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~-----~~~g~--~ 390 (541)
+||+++|.||++... +.......-.||++ +.|.++|+- +..|.+++++++.+.+.... ..++. .
T Consensus 247 ~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~ 323 (459)
T PRK05965 247 ELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT--VAKGLTSGY-VPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYS 323 (459)
T ss_pred HcCCEEEEechhccCccCchhhhHhhcCCCCCeEE--echhhccCC-cceeEEEEcHHHHHHHhccccccccccccCCCC
Confidence 999999999995432 12222333468888 789998752 23677778888887664210 01222 3
Q ss_pred ccHHHHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--
Q 009172 391 LNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-- 466 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~r--~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~-- 466 (541)
.+|..+.+++..|+.+... .++..+...++.+.|++. . .+|.. ...+|.|.|+.|++..+.
T Consensus 324 gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l---~--~~~~v----------~~vrG~Gl~~gie~~~~~~~ 388 (459)
T PRK05965 324 AHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDAL---R--AHPLV----------GDVRGRGLLGALELVADKAT 388 (459)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhh---c--cCCCE----------EEEeecceEEEEEEeccccc
Confidence 4677777777777665432 233333344444444431 1 12211 123678889999985311
Q ss_pred --------HHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHH
Q 009172 467 --------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADV 534 (541)
Q Consensus 467 --------~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlS----vG~Ed~edli~dL 534 (541)
....++...+...|+-+.. ...+.||+. +..++.+++++.|
T Consensus 389 ~~~~~~~~~~~~~i~~~~~~~Gll~~~---------------------------~g~~~i~~~PpL~it~~ei~~~~~~l 441 (459)
T PRK05965 389 KTPFDAALDPADRIFDRAYANGLVFRA---------------------------FGDGVLGFAPALCCTEGEFDLIFERT 441 (459)
T ss_pred cCCCCchhHHHHHHHHHHHhCCeEEEe---------------------------cCCcEEEEECCCcCCHHHHHHHHHHH
Confidence 1234555555444433221 013467777 5557778888888
Q ss_pred HHHHhh
Q 009172 535 LQALHA 540 (541)
Q Consensus 535 ~~AL~~ 540 (541)
.++|.+
T Consensus 442 ~~~l~~ 447 (459)
T PRK05965 442 RKTLDD 447 (459)
T ss_pred HHHHHH
Confidence 888764
No 302
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.52 E-value=7.1e-12 Score=135.30 Aligned_cols=288 Identities=11% Similarity=0.139 Sum_probs=170.0
Q ss_pred CCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHH-H--------H
Q 009172 207 YGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIF-I--------E 267 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g--~~~~i~~sSG~~Ai~~al~all~-------~-GD~VIv~~~~y~~~~~~-~--------~ 267 (541)
+.+|...+|.++|+++.. .+.+++++||++|+..+++.... + ..+||.....|++.... + .
T Consensus 86 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~ 165 (442)
T PRK13360 86 MGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNR 165 (442)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhh
Confidence 457888899999999874 35788899999999998874221 2 35799988888884211 1 0
Q ss_pred hhcccCCcEEEEeCCC------------------CHHHHHHhcc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHH
Q 009172 268 TVLPKMGITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 268 ~~l~~~Gi~v~~vd~~------------------dle~Le~ai~---~~~tklV~lesp~NPtG~v~d----i~~Ia~la 322 (541)
.........+.+++.. .++++++++. .+++.+|++|......|.+.| +++|.++|
T Consensus 166 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc 245 (442)
T PRK13360 166 KAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREIC 245 (442)
T ss_pred hccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 0001001112222211 1456777774 235889999999988899888 99999999
Q ss_pred HhCCCEEEEEcCCCC-CC-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-------hhhcCC
Q 009172 323 HKKGAIVCIDGTFAT-PL-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-------HHVLGG 389 (541)
Q Consensus 323 ~~~gillvvDea~a~-~~-----~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~-------~~~~g~ 389 (541)
++||+++|+||++.. +- .........|++ +++|.++++. ...|.+++++++.+.+... ......
T Consensus 246 ~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--t~gK~l~gG~-~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~ 322 (442)
T PRK13360 246 DKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLL--TCAKGLTNGA-IPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTY 322 (442)
T ss_pred HHcCCEEEEechhhCCCCCccchhhhhcCCCCcee--eeeeccccCc-cceEEEEEcHHHHHHhhcCCccccccccCCCC
Confidence 999999999999632 11 122222335776 4899998642 1245577788887765421 111112
Q ss_pred CccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC---
Q 009172 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG--- 464 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g--- 464 (541)
..+|..+..++..++.+.. ..++..+..+++.+.|++... +|.+ ...+|.|.++.+++..
T Consensus 323 ~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~-----~~~v----------~~vrG~Gl~~~~~l~~~~~ 387 (442)
T PRK13360 323 SGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRD-----APHV----------IDIRNLGLVGAVELAPRDG 387 (442)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-----CCCe----------eeeeccceEEEEEEecCCC
Confidence 3467777777767766542 223334444555555543211 1111 1124567777777742
Q ss_pred -CHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009172 465 -DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 465 -~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~ 539 (541)
....+.++.+.+...|+-+.. ..+.|||+.-+ ++++.+++.|+++|+
T Consensus 388 ~~~~~~~~~~~~l~~~Gvl~~~----------------------------~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~ 439 (442)
T PRK13360 388 KPGKRAYEVFLKCFEKGLMIRY----------------------------TGDILALSPPLIIEEAQIDELFDILAQALK 439 (442)
T ss_pred CcchhHHHHHHHHHHCCcEEEe----------------------------cCCEEEEeCCCccCHHHHHHHHHHHHHHHH
Confidence 112344555555433433221 12468887443 556666777777665
Q ss_pred h
Q 009172 540 A 540 (541)
Q Consensus 540 ~ 540 (541)
+
T Consensus 440 ~ 440 (442)
T PRK13360 440 E 440 (442)
T ss_pred H
Confidence 4
No 303
>PRK12403 putative aminotransferase; Provisional
Probab=99.52 E-value=7.8e-12 Score=135.68 Aligned_cols=235 Identities=17% Similarity=0.212 Sum_probs=145.1
Q ss_pred CchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc-------cCCCE-EEEcCCCCcch-HHHHHhh-c---cc
Q 009172 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PAGGH-IVTTTDCYRKT-RIFIETV-L---PK 272 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all-------~~GD~-VIv~~~~y~~~-~~~~~~~-l---~~ 272 (541)
.++...+|.++|+++.+. +.+++++||++|+..+++... ++++. |+.....|++. ...+... . ..
T Consensus 96 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~ 175 (460)
T PRK12403 96 THPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHE 175 (460)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccc
Confidence 577888999999999873 678999999999999987542 23334 45555667663 2111100 0 00
Q ss_pred CC---cEEEEeCCC-----------------CHHHHHHhcc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhC
Q 009172 273 MG---ITATVIDPA-----------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (541)
Q Consensus 273 ~G---i~v~~vd~~-----------------dle~Le~ai~---~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~ 325 (541)
.+ ..+..++.. +.+++++.+. .+++.+|++|......|.+.+ +++|.++|++|
T Consensus 176 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~ 255 (460)
T PRK12403 176 MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY 255 (460)
T ss_pred cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc
Confidence 00 012222210 1245655552 235889999998888888877 99999999999
Q ss_pred CCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCCC--ccHHH
Q 009172 326 GAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGGA--LNPNA 395 (541)
Q Consensus 326 gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~--~~g~~--~s~~~ 395 (541)
|+++|+||++... +.......-.||++ ++|.++++-- ..|.+++++++.+.+..... .++.+ .+|..
T Consensus 256 g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lggG~~-Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~ 332 (460)
T PRK12403 256 DVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTSGYV-PMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVA 332 (460)
T ss_pred CCEEEEeccccCCCcCchhhhhhhcCCCCCeEE--Eccccccccc-ceEEEEECHHHHHHHhcCCCccccCCCCCCCHHH
Confidence 9999999996421 11222233368887 8999986521 24555577887776643111 12333 56888
Q ss_pred HHHHHHhHHHHHHH--HHHHH-HHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009172 396 AYLIIRGMKTLHLR--VQQQN-STALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 396 a~l~l~~l~tl~~r--~~~~~-~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
+..++..|+.+... .++.. +..+++.+.|++ ++.+.. .+|.|.|+.+++.
T Consensus 333 ~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrG~Gl~~gie~~ 389 (460)
T PRK12403 333 AAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGE------------------VQGAGLVAALQFA 389 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEe------------------EeecceEEEEEEc
Confidence 88777777766432 23332 444555555543 333322 2567889999985
No 304
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.52 E-value=1.2e-12 Score=139.13 Aligned_cols=212 Identities=19% Similarity=0.221 Sum_probs=145.0
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe-------
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI------- 280 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v------- 280 (541)
++|+..+||+.+++++|.+.++.++||+.|+.+++...+++||+| +...|..+.... ....|....-+
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ah---I~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYH---QELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHH---HHhCCcEEEeeecccccc
Confidence 689999999999999999999999999999998766678999965 555555544321 12223322111
Q ss_pred -------C-CCCHHHHHHhccCC---CeeEEEEeCCCCCC-Cccc---CHHHHHHHHHhCCCEEEEEcCCCCC-------
Q 009172 281 -------D-PADMEGLEAALNNN---NVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCIDGTFATP------- 338 (541)
Q Consensus 281 -------d-~~dle~Le~ai~~~---~tklV~lesp~NPt-G~v~---di~~Ia~la~~~gillvvDea~a~~------- 338 (541)
+ ..|+++|+++|++. ++++|.++.++|.. |..+ ++++|.++|++||+.||.|.+....
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~ 230 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKE 230 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcc
Confidence 1 13899999999753 35578888889988 5665 5789999999999999999995432
Q ss_pred ----Cccccc-------ccCCcEEEECCccccCCCCCceEEEEEeC-hHHHHHHHHHhhhc-C----CCccHHHHHHHHH
Q 009172 339 ----LNQKAL-------SLGADLVLHSATKFIGGHNDVLAGSISGS-GKLVTQIRNLHHVL-G----GALNPNAAYLIIR 401 (541)
Q Consensus 339 ----~~~~~l-------~~gaDivv~S~sK~lgg~g~v~gG~vv~~-~~li~~l~~~~~~~-g----~~~s~~~a~l~l~ 401 (541)
+..++. -..+|.+++|++|.++.. .||+++.+ +++.++++.....+ | +.++.-....+..
T Consensus 231 re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~---~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAv 307 (460)
T PRK13237 231 REEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVN---IGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAI 307 (460)
T ss_pred cccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCC---CceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHh
Confidence 222222 124799999999998875 37877764 57888888764333 2 1222212222222
Q ss_pred hHHH-HH-HHHHHHHHHHHHHHHHHHhC
Q 009172 402 GMKT-LH-LRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 402 ~l~t-l~-~r~~~~~~na~~la~~L~~~ 427 (541)
+++. .+ ..++...++.++|++.|.+.
T Consensus 308 gl~E~~~~~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 308 GIEESVQYEYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHHC
Confidence 3332 22 44556667889999999875
No 305
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.52 E-value=1.3e-11 Score=122.27 Aligned_cols=213 Identities=18% Similarity=0.191 Sum_probs=156.4
Q ss_pred HHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC-----
Q 009172 212 TVVVEEKMSALEGAE---STVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA----- 283 (541)
Q Consensus 212 ~~~Le~~LA~l~g~~---~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~----- 283 (541)
.+++.+-+...+... --++-++|..+++.++..++.|||.|++-...-.+. .+...++++|++|..++.+
T Consensus 52 m~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~--ra~D~~~r~ga~V~~v~~~~G~~~ 129 (385)
T KOG2862|consen 52 MDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQ--RAADCARRYGAEVDVVEADIGQAV 129 (385)
T ss_pred HHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHH--HHHHHHHhhCceeeEEecCcccCc
Confidence 445555566566532 345567888999999999999999998865544332 2446788999999988643
Q ss_pred CHHHHHHhccCCCeeEEEEeCCCCCCCcccC-HHHHHHHHHhCCCEEEEEcCCCC-CCcccccccCCcEEEECCccccCC
Q 009172 284 DMEGLEAALNNNNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIGG 361 (541)
Q Consensus 284 dle~Le~ai~~~~tklV~lesp~NPtG~v~d-i~~Ia~la~~~gillvvDea~a~-~~~~~~l~~gaDivv~S~sK~lgg 361 (541)
.++.+++++.++++++|++++--.-||.++| ++.+.++||+|+++++||.+..- ...+...++|+|+......|.+++
T Consensus 130 ~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~a 209 (385)
T KOG2862|consen 130 PLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGA 209 (385)
T ss_pred cHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCC
Confidence 6899999998888999999998899999999 77888999999999999998543 344566789999999889999998
Q ss_pred CCCceEEEEEeChHHHHHHHHHhh--------------hcCC---------CccH-----HHHHHHHHhHHHHHHHHHHH
Q 009172 362 HNDVLAGSISGSGKLVTQIRNLHH--------------VLGG---------ALNP-----NAAYLIIRGMKTLHLRVQQQ 413 (541)
Q Consensus 362 ~g~v~gG~vv~~~~li~~l~~~~~--------------~~g~---------~~s~-----~~a~l~l~~l~tl~~r~~~~ 413 (541)
+.+ .+.+..++...++++.... .+|. +.+. +.+++.+-.-+-++.+.++|
T Consensus 210 P~G--LsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH 287 (385)
T KOG2862|consen 210 PAG--LSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRH 287 (385)
T ss_pred CCC--cceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 863 3567777777777653221 1221 1222 22333333334577788999
Q ss_pred HHHHHHHHHHHHhCC
Q 009172 414 NSTALRMAEILEAHP 428 (541)
Q Consensus 414 ~~na~~la~~L~~~p 428 (541)
.++++++...|+++.
T Consensus 288 ~e~s~~l~~~l~~~G 302 (385)
T KOG2862|consen 288 REMSKWLKLSLEALG 302 (385)
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999888863
No 306
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.52 E-value=2.5e-12 Score=134.45 Aligned_cols=222 Identities=20% Similarity=0.260 Sum_probs=151.6
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhc------
Q 009172 200 ASFEYGRYGNPTTVVVEEKMSALEGA-ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL------ 270 (541)
Q Consensus 200 ~~~~Y~R~~~p~~~~Le~~LA~l~g~-~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l------ 270 (541)
.+..|+. ++..--++.+.|.++.+. +.+-+++||++|...+++.- ....|+|+...-+|++....+-.-.
T Consensus 84 ~G~~fg~-Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t 162 (432)
T COG0001 84 RGLSFGA-PTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAAT 162 (432)
T ss_pred hcCCCCC-CCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCccc
Confidence 4566765 444455667888888887 78899999999998888632 2335899999999998655432111
Q ss_pred ----ccCCc------EEEEeCCCCHHHHHHhccCC--CeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcC
Q 009172 271 ----PKMGI------TATVIDPADMEGLEAALNNN--NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 271 ----~~~Gi------~v~~vd~~dle~Le~ai~~~--~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea 334 (541)
...|+ .+..++.+|++.+++++++. ++.+|++|..-.-.|.+.| +++|.++|+++|++||.||+
T Consensus 163 ~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEV 242 (432)
T COG0001 163 LGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEV 242 (432)
T ss_pred CCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecc
Confidence 11122 34445667999999999754 6899999988766788777 77999999999999999999
Q ss_pred CCCC-----CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhh-cCCCc--cHHHHHHHHHhHHHH
Q 009172 335 FATP-----LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-LGGAL--NPNAAYLIIRGMKTL 406 (541)
Q Consensus 335 ~a~~-----~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~-~g~~~--s~~~a~l~l~~l~tl 406 (541)
...+ -.+.....-.|+.+ +.|.+||+- ..|++.+++++.+.+...... .++++ +|....+....++.+
T Consensus 243 iTGFR~~~gGaq~~~gi~PDltt--lGKiIGGGl--P~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l 318 (432)
T COG0001 243 ITGFRVALGGAQGYYGVEPDLTT--LGKIIGGGL--PIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEEL 318 (432)
T ss_pred hhhcccCCcccccccCcCcchhh--hhhhhcCCc--ceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHH
Confidence 5422 12333334456655 899999764 678899999999877654322 22333 355555444455554
Q ss_pred HH---HHHHHHHHHHHHHHHHHh
Q 009172 407 HL---RVQQQNSTALRMAEILEA 426 (541)
Q Consensus 407 ~~---r~~~~~~na~~la~~L~~ 426 (541)
.. -.++..+..++|.+-|++
T Consensus 319 ~~~~~~y~~l~~~~~~L~~gl~~ 341 (432)
T COG0001 319 MTEEGVYERLDALGERLAEGLRA 341 (432)
T ss_pred HhcccHHHHHHHHHHHHHHHHHH
Confidence 43 355566667777776665
No 307
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=1.3e-13 Score=142.19 Aligned_cols=211 Identities=20% Similarity=0.240 Sum_probs=167.6
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHH
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGL 288 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~L 288 (541)
...+.++|+.+|++.|.+++++|+-|-..+.+.+.+++.||.-||.....|.+.. .-++.-|..++.+..+|..+|
T Consensus 181 ~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~----~GaRLSgAtiRVfkHNdm~~L 256 (519)
T KOG1357|consen 181 TEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLI----TGARLSGATTRVFRHNDMQGL 256 (519)
T ss_pred HHHHHHHHHHHHHhcCCcceEEEeccccccccCcceeecCCcceeeccccchhee----ccccccCceEEEEecCCHHHH
Confidence 4578899999999999999999999999999999999999999999998887744 335556888888999999988
Q ss_pred HHhccCC------------CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc----------cccccc
Q 009172 289 EAALNNN------------NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN----------QKALSL 346 (541)
Q Consensus 289 e~ai~~~------------~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~----------~~~l~~ 346 (541)
|+.|++. +.-+|++|.....-|.+.+++++.++++++.++++.||++..+.. ..+...
T Consensus 257 Er~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~ 336 (519)
T KOG1357|consen 257 ERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPE 336 (519)
T ss_pred HHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCch
Confidence 8887531 234788888999999999999999999999999999999654332 112233
Q ss_pred CCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCCccHHHHHHHHHhHHHH---------HHHHHHHHH
Q 009172 347 GADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGALNPNAAYLIIRGMKTL---------HLRVQQQNS 415 (541)
Q Consensus 347 gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~--~~~g~~~s~~~a~l~l~~l~tl---------~~r~~~~~~ 415 (541)
.+||...+++|.++.. ||++.+++++++.++... ...+..++|..+...+.+++.+ .+++++..+
T Consensus 337 dvDImMGtftKSfga~----GGyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ 412 (519)
T KOG1357|consen 337 DVDIMMGTFTKSFGAA----GGYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAE 412 (519)
T ss_pred hheeecceehhhcccc----cceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHh
Confidence 5789999999999965 599999999999887533 3456677777777767777654 456777778
Q ss_pred HHHHHHHHHHhC
Q 009172 416 TALRMAEILEAH 427 (541)
Q Consensus 416 na~~la~~L~~~ 427 (541)
|...+...|++.
T Consensus 413 ns~yfr~~l~~~ 424 (519)
T KOG1357|consen 413 NSRYFRWELQKM 424 (519)
T ss_pred hhHHHHHhhhcC
Confidence 887777766654
No 308
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.51 E-value=7.8e-12 Score=135.59 Aligned_cols=291 Identities=18% Similarity=0.210 Sum_probs=172.3
Q ss_pred CCCCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHH-HHHhh-cc--c-
Q 009172 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRI-FIETV-LP--K- 272 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~-~~~~~-l~--~- 272 (541)
+...++.++...+|.++|+++.+. +.+++++||++|+..++... .....+||.....|++... .+... .. +
T Consensus 105 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 184 (459)
T PRK06082 105 FSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQ 184 (459)
T ss_pred CccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCccccc
Confidence 334567889999999999999864 46788889999999988643 1234688888888887431 11100 00 0
Q ss_pred -CC---cEEEEeC--------CCC--------HHHHHHhccC-CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCE
Q 009172 273 -MG---ITATVID--------PAD--------MEGLEAALNN-NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAI 328 (541)
Q Consensus 273 -~G---i~v~~vd--------~~d--------le~Le~ai~~-~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gil 328 (541)
++ ..+..++ ..+ ++.+++.++. +++.+|++|...+..+.+.| +++|.++|++||++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~l 264 (459)
T PRK06082 185 GMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVL 264 (459)
T ss_pred CCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 00 0112222 111 3457777752 25889999998876444556 88999999999999
Q ss_pred EEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHh
Q 009172 329 VCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (541)
Q Consensus 329 lvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~ 402 (541)
+|+||++... +.........|+++ ++|.++++. ...|.+++++++.+.............+|..+.+++..
T Consensus 265 lI~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~-~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~ 341 (459)
T PRK06082 265 LIIDEIPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGGGL-VPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALAT 341 (459)
T ss_pred EEEechhhCCCccchhhHhHhhCCCCCEEE--ecccccCCC-CcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHH
Confidence 9999996431 11122233468887 899999753 23566667776554322111112223467777777777
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH-------HHH
Q 009172 403 MKTLHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-------TAT 469 (541)
Q Consensus 403 l~tl~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~-------~~~ 469 (541)
|+.+.. ..++..+..+++.+.|++ +|.+. +.+|.|.|+.+++..+. +..
T Consensus 342 L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrG~Gl~~~ve~~~~~~~~~~~~~~~ 403 (459)
T PRK06082 342 IEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIG------------------DVRGIGLLWGVELVTDRHTKERAYDEA 403 (459)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCee------------------eeeeccceeEEEEccCccccCccHHHH
Confidence 776542 233444445555555543 22222 23567889999995321 223
Q ss_pred HHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEe----cCCCHHHHHHHHHHHHhh
Q 009172 470 IKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF----GVEDFEDLKADVLQALHA 540 (541)
Q Consensus 470 ~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv----G~Ed~edli~dL~~AL~~ 540 (541)
..++..+...|+-+... ..+.|||+. ..++.+..++.|+++|.+
T Consensus 404 ~~~~~~~~~~Gvl~~~~---------------------------~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 404 EAVLYRCLNNGLSFKVS---------------------------QGNVIQLSPPLIITREELTQALAILEEAIAK 451 (459)
T ss_pred HHHHHHHHhCCCEEEec---------------------------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 44444443333222110 135677764 446777777888877764
No 309
>PRK07046 aminotransferase; Validated
Probab=99.50 E-value=1.4e-11 Score=133.25 Aligned_cols=215 Identities=20% Similarity=0.211 Sum_probs=144.6
Q ss_pred CCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHH-HHhhc-----c---cCCc
Q 009172 207 YGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIF-IETVL-----P---KMGI 275 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~-~~~~l-----~---~~Gi 275 (541)
+.++...+|.++|.++.+.+.+.+++||++|+..+++.. ....++|+.....|++.... +.... . ..|+
T Consensus 112 ~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~ 191 (453)
T PRK07046 112 LPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQ 191 (453)
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCC
Confidence 467888889999999988788999999999999988743 22346888888889885321 11100 0 0121
Q ss_pred ------EEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCC----CCCcc
Q 009172 276 ------TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA----TPLNQ 341 (541)
Q Consensus 276 ------~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a----~~~~~ 341 (541)
.+..++.+|++++++.+..+++.+|++|......|.+.+ +++|.++|+++|+++|.||++. .+-.+
T Consensus 192 ~~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~ 271 (453)
T PRK07046 192 VHDLTATTRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT 271 (453)
T ss_pred CccccCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh
Confidence 234455678999999996556999999988877777766 7899999999999999999974 22112
Q ss_pred cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-----h--hcCC--CccHHHHHHHHHhHHHHHH--HH
Q 009172 342 KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----H--VLGG--ALNPNAAYLIIRGMKTLHL--RV 410 (541)
Q Consensus 342 ~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~-----~--~~g~--~~s~~~a~l~l~~l~tl~~--r~ 410 (541)
.....-.|+++ +.|.++|+ ...|++++++++.+.+.... . .+++ ..+|..+.+++..|+.+.. ..
T Consensus 272 ~~~gv~PDi~t--~gK~lggG--~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~ 347 (453)
T PRK07046 272 RAHGLEPDFLV--VGKPIAGG--VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAY 347 (453)
T ss_pred HHhCCCcccee--ehhhhcCC--CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHH
Confidence 22233468876 79999975 35788889999888775311 0 1222 2357777766666665532 13
Q ss_pred HHHHHHHHHHHHHHH
Q 009172 411 QQQNSTALRMAEILE 425 (541)
Q Consensus 411 ~~~~~na~~la~~L~ 425 (541)
++..+..+++.+.|+
T Consensus 348 ~~~~~~g~~l~~~L~ 362 (453)
T PRK07046 348 AHMLALAARLAAGLR 362 (453)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333344455555554
No 310
>PLN02880 tyrosine decarboxylase
Probab=99.50 E-value=8.7e-12 Score=136.09 Aligned_cols=230 Identities=14% Similarity=0.128 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHh----cc-------CCCEEEEcCCCCcchHHHHHhhcc
Q 009172 212 TVVVEEKMSALEGAES---------TVIMASGMSASTVMLLAL----VP-------AGGHIVTTTDCYRKTRIFIETVLP 271 (541)
Q Consensus 212 ~~~Le~~LA~l~g~~~---------~i~~sSG~~Ai~~al~al----l~-------~GD~VIv~~~~y~~~~~~~~~~l~ 271 (541)
-.++-+.+++++|.++ .+++++|++|+..++.+. ++ +.-.|++++..|.+..... .
T Consensus 124 E~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa----~ 199 (490)
T PLN02880 124 EMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKAC----Q 199 (490)
T ss_pred HHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHH----H
Confidence 3344556677777532 577888889887776542 11 1124567888887765443 3
Q ss_pred cCCc-----EEEEeCC-----CCHHHHHHhccCC-----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCC
Q 009172 272 KMGI-----TATVIDP-----ADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 272 ~~Gi-----~v~~vd~-----~dle~Le~ai~~~-----~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a 336 (541)
..|+ ..+.+|. .|+++|+++|++. .+-+|+....+-.+|.+-|+++|+++|+++|++++||.+|+
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~g 279 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYA 279 (490)
T ss_pred HcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhH
Confidence 3344 3333432 3789999888532 24566666677889999999999999999999999999988
Q ss_pred CCCcccc-----cc--cCCcEEEECCccccCCCCCceEEEEEeCh-H-HHHHHHH---Hhhh-----------------c
Q 009172 337 TPLNQKA-----LS--LGADLVLHSATKFIGGHNDVLAGSISGSG-K-LVTQIRN---LHHV-----------------L 387 (541)
Q Consensus 337 ~~~~~~~-----l~--~gaDivv~S~sK~lgg~g~v~gG~vv~~~-~-li~~l~~---~~~~-----------------~ 387 (541)
.+....+ +. .++|.++.++||++..+- ..|+++.++ . +.+.+.. +... .
T Consensus 280 g~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~--~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~ 357 (490)
T PLN02880 280 GSACICPEYRHYIDGVEEADSFNMNAHKWFLTNF--DCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPL 357 (490)
T ss_pred HHHHhCHHHHHHhcCchhcCEEEECchhhcCCCc--cEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCC
Confidence 7543221 11 368999999999998775 357666553 2 2222211 1000 0
Q ss_pred CCCccHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009172 388 GGALNPNAAYLII--RGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 388 g~~~s~~~a~l~l--~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g 464 (541)
|........|+.+ .|.+.+..++++..+.++++++.|++.+.++-+..|. .+++.|.+++
T Consensus 358 ~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~-----------------~~iv~Fr~~~ 419 (490)
T PLN02880 358 GRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRI-----------------FSLVCFRLVP 419 (490)
T ss_pred CCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCc-----------------eEEEEEEEeC
Confidence 1111234445443 3567788888888899999999999888765443322 3588999864
No 311
>PRK07482 hypothetical protein; Provisional
Probab=99.50 E-value=1.2e-11 Score=134.31 Aligned_cols=238 Identities=12% Similarity=0.099 Sum_probs=147.1
Q ss_pred CCCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhc------c-C-CCEEEEcCCCCcchHHHHHhhc----
Q 009172 205 GRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV------P-A-GGHIVTTTDCYRKTRIFIETVL---- 270 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g--~~~~i~~sSG~~Ai~~al~all------~-~-GD~VIv~~~~y~~~~~~~~~~l---- 270 (541)
..+.++...+|.++|+++.. .+.+++++||++|+..+++... . + ..+||.....|++.......+-
T Consensus 89 ~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~ 168 (461)
T PRK07482 89 VGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSL 168 (461)
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCch
Confidence 34678888899999999875 3578888999999999987432 1 2 3578888888888421110000
Q ss_pred --ccCC---cEEEEeCCC------------------CHHHHHHhcc---CCCeeEEEEeCCCCCCCcccC----HHHHHH
Q 009172 271 --PKMG---ITATVIDPA------------------DMEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSD 320 (541)
Q Consensus 271 --~~~G---i~v~~vd~~------------------dle~Le~ai~---~~~tklV~lesp~NPtG~v~d----i~~Ia~ 320 (541)
..++ ..+..++.. +++++++.+. .+++.+|++|......|.+.+ +++|.+
T Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~ 248 (461)
T PRK07482 169 FHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQA 248 (461)
T ss_pred hhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHH
Confidence 0011 011111100 3567777773 235899999998877777754 779999
Q ss_pred HHHhCCCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-----hhhcCC
Q 009172 321 LCHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGG 389 (541)
Q Consensus 321 la~~~gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~-----~~~~g~ 389 (541)
+|++||+++|+||++... +.......-.|+++ +.|.++|+- ...|.+++++++.+.+... ...++.
T Consensus 249 lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~ 325 (461)
T PRK07482 249 VLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLIT--VAKGLTSAY-APLSGSIVGEKVWDVLEQGSDEHGAIGHGW 325 (461)
T ss_pred HHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEE--EccccccCc-cccceeeecHHHHHHHhcccccCCccccCC
Confidence 999999999999995432 12222333468888 789998652 1245666777777666421 001222
Q ss_pred --CccHHHHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHH----hCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEE
Q 009172 390 --ALNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAEILE----AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE 461 (541)
Q Consensus 390 --~~s~~~a~l~l~~l~tl~~r--~~~~~~na~~la~~L~----~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~ 461 (541)
.-+|..+.+++..|+.+... .++..+..+++.+.|+ ++|.+.. .+|.|.|+.++
T Consensus 326 T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~------------------vrG~Glm~gie 387 (461)
T PRK07482 326 TYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGE------------------VRGVGMLAAVE 387 (461)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEE------------------EeeceeEEEEE
Confidence 34677777777777665431 2333333444444443 2333322 25678899999
Q ss_pred Ec
Q 009172 462 VD 463 (541)
Q Consensus 462 l~ 463 (541)
+.
T Consensus 388 l~ 389 (461)
T PRK07482 388 FV 389 (461)
T ss_pred ec
Confidence 95
No 312
>PRK07678 aminotransferase; Validated
Probab=99.50 E-value=1e-11 Score=134.44 Aligned_cols=294 Identities=16% Similarity=0.191 Sum_probs=176.3
Q ss_pred CCCchhHHHHHHHHHHHhCCC-cEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHhhc------
Q 009172 206 RYGNPTTVVVEEKMSALEGAE-STVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVL------ 270 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~~-~~i~~sSG~~Ai~~al~all~-------~G-D~VIv~~~~y~~~~~~~~~~l------ 270 (541)
.+.++...+|.++|+++.+.. .+++++||++|+..+++.... +| .+||.....|++.....-..-
T Consensus 85 ~~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~ 164 (451)
T PRK07678 85 TQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRK 164 (451)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccc
Confidence 357788889999999998654 567778999999998874311 23 578888888888432211110
Q ss_pred ---ccCCcEEEEeCCC--------------C---HHHHHHhcc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009172 271 ---PKMGITATVIDPA--------------D---MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 271 ---~~~Gi~v~~vd~~--------------d---le~Le~ai~---~~~tklV~lesp~NPtG~v~d----i~~Ia~la~ 323 (541)
......+..++.. + ++.+++.++ ++++.+|++|......|.+.+ +++|.++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~ 244 (451)
T PRK07678 165 YKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQ 244 (451)
T ss_pred cccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHH
Confidence 0000111222210 1 233565563 235899999998877787766 889999999
Q ss_pred hCCCEEEEEcCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH------hhhcCCCc
Q 009172 324 KKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL------HHVLGGAL 391 (541)
Q Consensus 324 ~~gillvvDea~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~------~~~~g~~~ 391 (541)
+||+++|+||++... - ..+....-.|+++ ++|.++++. ...|++++++++.+.+... ........
T Consensus 245 ~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt--~gK~lggG~-~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~g 321 (451)
T PRK07678 245 KHGALLISDEVICGFGRTGKAFGFMNYGVKPDIIT--MAKGITSAY-LPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGG 321 (451)
T ss_pred HcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEE--eecccccCC-cceeEEEEcHHHHHHHhccCcccccccCCCCCc
Confidence 999999999996322 1 1222333468886 799999753 3467788888888776531 11112234
Q ss_pred cHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-
Q 009172 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG- 464 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g- 464 (541)
+|..+..++..|+.+.. ..++..+..+++.+.|++ ++.+.. .+|.|.|+.+++..
T Consensus 322 np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~------------------vrg~Gl~~~i~~~~~ 383 (451)
T PRK07678 322 NPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGD------------------IRGKGLLVGIELVND 383 (451)
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEE------------------EEeeceEEEEEEecC
Confidence 67777777777776643 223333444455544432 332222 24678899999842
Q ss_pred -------CHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHH
Q 009172 465 -------DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKAD 533 (541)
Q Consensus 465 -------~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~d 533 (541)
+...+..+...+...|+-+...+ |.. + -..+.|||+.-+ ++++.+++.
T Consensus 384 ~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g-------~~v------~--------~~~~~lrl~Ppl~it~~eid~~~~~ 442 (451)
T PRK07678 384 KETKEPADNDKVASVVAACKEKGLIIGKNG-------DTV------A--------GYNNVLTLSPPLVISSEEIAFIVGT 442 (451)
T ss_pred CcccCcCchHHHHHHHHHHHHCCcEEeecC-------ccc------c--------CCCCEEEEECCCcCCHHHHHHHHHH
Confidence 12335566666655554332111 000 0 013678987554 566677777
Q ss_pred HHHHHhhC
Q 009172 534 VLQALHAI 541 (541)
Q Consensus 534 L~~AL~~i 541 (541)
|+++|.++
T Consensus 443 l~~~l~~~ 450 (451)
T PRK07678 443 LKTALERI 450 (451)
T ss_pred HHHHHHhc
Confidence 77777653
No 313
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.50 E-value=2.4e-11 Score=130.84 Aligned_cols=216 Identities=19% Similarity=0.255 Sum_probs=143.5
Q ss_pred CCchhHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc----------cC
Q 009172 207 YGNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP----------KM 273 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g-~~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~----------~~ 273 (541)
+.++...+|.++|.++.+ .+.+++++||++|+..+++.. .....+||.....|++........-. ..
T Consensus 90 ~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 169 (428)
T PRK12389 90 TPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSA 169 (428)
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCC
Confidence 567888899999988775 367888999999999998743 22346788888888884322111100 01
Q ss_pred C------cEEEEeCCCCHHHHHHhccC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCC---
Q 009172 274 G------ITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP--- 338 (541)
Q Consensus 274 G------i~v~~vd~~dle~Le~ai~~--~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~--- 338 (541)
+ -.+..++..|++.+++.++. +++.+|++|...+..|.+.| +++|.++|+++|+++|+||++...
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~ 249 (428)
T PRK12389 170 GVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFM 249 (428)
T ss_pred CCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccC
Confidence 1 13444556689999888852 25889999999888898888 999999999999999999996532
Q ss_pred Cc--ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-hhcCC--CccHHHHHHHHHhHHHHHH--HHH
Q 009172 339 LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGG--ALNPNAAYLIIRGMKTLHL--RVQ 411 (541)
Q Consensus 339 ~~--~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~-~~~g~--~~s~~~a~l~l~~l~tl~~--r~~ 411 (541)
.. +.....-.|++ +++|.++++ ...|.+++++++.+.+.... ..++. ..+|..+.+++..|+.+.. ..+
T Consensus 250 ~~~a~~~~gv~PDiv--t~gK~lggG--~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~ 325 (428)
T PRK12389 250 YGGAQDLLGVEPDLT--ALGKIIGGG--LPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYE 325 (428)
T ss_pred cchhhHHhCCCCCee--eechhhcCC--CceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHH
Confidence 11 11223346776 489999864 34566688888888764211 11222 3467777777777776542 233
Q ss_pred HHHHHHHHHHHHHHh
Q 009172 412 QQNSTALRMAEILEA 426 (541)
Q Consensus 412 ~~~~na~~la~~L~~ 426 (541)
+..+..+++.+.|++
T Consensus 326 ~~~~~g~~l~~~L~~ 340 (428)
T PRK12389 326 KLDRLGAMLEEGILE 340 (428)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444455555555543
No 314
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.49 E-value=1.2e-12 Score=146.17 Aligned_cols=175 Identities=16% Similarity=0.150 Sum_probs=131.9
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC----
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
.....+.++..|+++|++...++.+|+ .++.+++++++++||.||+++++|-+.+.. .+-..|+..+++.+.
T Consensus 173 eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hg---aLiLsGa~PVYl~P~~n~~ 249 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHG---ALIQAGATPVYLETARNPF 249 (720)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHH---HHHHcCCeEEEeecccccc
Confidence 345778899999999999999999998 789999999999999999999999987642 123346777776421
Q ss_pred ------C-----HHHHHHhccCC---------CeeEEEEeCCCCCCCcccCHHHHHHH-HHhCCCEEEEEcCCCCCCccc
Q 009172 284 ------D-----MEGLEAALNNN---------NVSLFFTESPTNPFLRCVDVKLVSDL-CHKKGAIVCIDGTFATPLNQK 342 (541)
Q Consensus 284 ------d-----le~Le~ai~~~---------~tklV~lesp~NPtG~v~di~~Ia~l-a~~~gillvvDea~a~~~~~~ 342 (541)
+ .+.++++|+.+ +.+++++.+|+ ..|.+.|+++|+++ +|.++ +|++||+|+....+.
T Consensus 250 Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~ 327 (720)
T PRK13578 250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFI 327 (720)
T ss_pred CCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-cEEEeCcchhhhccC
Confidence 3 45588877643 15899997776 67999999999998 68888 999999977643222
Q ss_pred ---------ccccCCc----EEEECCccccCCCCCceEEEEEeChHH---------HHHHHHHhhhcCCC
Q 009172 343 ---------ALSLGAD----LVLHSATKFIGGHNDVLAGSISGSGKL---------VTQIRNLHHVLGGA 390 (541)
Q Consensus 343 ---------~l~~gaD----ivv~S~sK~lgg~g~v~gG~vv~~~~l---------i~~l~~~~~~~g~~ 390 (541)
.++.|+| +++.|.||.+++.. .+.++-.+... .++++.....+.++
T Consensus 328 p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alT--QaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qST 395 (720)
T PRK13578 328 PMMADCSPLLLELNENDPGIFVTQSVHKQQAGFS--QTSQIHKKDNHIKGQARYCPHKRLNNAFMLHAST 395 (720)
T ss_pred cccccCChhhhhcCCCCCCeEEEEChhhcchhhh--hHhhhhcCCcccccccccCCHHHHHHHHHHHcCC
Confidence 2467999 99999999999775 45566544332 24566655555544
No 315
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.49 E-value=7.4e-12 Score=134.62 Aligned_cols=291 Identities=13% Similarity=0.149 Sum_probs=175.4
Q ss_pred CCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchH-HHHHh------
Q 009172 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTR-IFIET------ 268 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g--~~~~i~~sSG~~Ai~~al~all~-------~G-D~VIv~~~~y~~~~-~~~~~------ 268 (541)
.+.++...+|.++|+++.. .+.+++++||++|+..+++.... +| .+||.....|++.. ..+..
T Consensus 83 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 162 (429)
T PRK06173 83 GFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTG 162 (429)
T ss_pred ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchh
Confidence 4567888899999999875 35788889999999998874321 33 57888888888832 11100
Q ss_pred hcccCC---cEEEEeCC-----------CCHHHHHHhcc--CCCeeEEEEeCC-CCCCCcccC----HHHHHHHHHhCCC
Q 009172 269 VLPKMG---ITATVIDP-----------ADMEGLEAALN--NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGA 327 (541)
Q Consensus 269 ~l~~~G---i~v~~vd~-----------~dle~Le~ai~--~~~tklV~lesp-~NPtG~v~d----i~~Ia~la~~~gi 327 (541)
.-..++ ..+.+++. .+++.+++.+. .+++.+|++|.. ....|.+.+ +++|.++|++||+
T Consensus 163 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~ 242 (429)
T PRK06173 163 MHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGV 242 (429)
T ss_pred hhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCC
Confidence 000000 01222221 13566777774 235899999985 766676644 7799999999999
Q ss_pred EEEEEcCCCCCCc-------ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh---hhcC--CCccHHH
Q 009172 328 IVCIDGTFATPLN-------QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH---HVLG--GALNPNA 395 (541)
Q Consensus 328 llvvDea~a~~~~-------~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~---~~~g--~~~s~~~ 395 (541)
++|+||++ +++. ........||++ ++|.++|+- +..+.++.++++.+.+.... ..++ ...+|..
T Consensus 243 llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG~-~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~ 318 (429)
T PRK06173 243 LLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKALTGGY-LTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLA 318 (429)
T ss_pred eEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhhhCCc-cccceEEecHHHHHHHhcCCCCccccCCCCCcCHHH
Confidence 99999997 3321 112223467777 899997431 23577778888877664210 1122 1346777
Q ss_pred HHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHH
Q 009172 396 AYLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFI 473 (541)
Q Consensus 396 a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l 473 (541)
+..++..|+.+.. ..++..+..+++.+.|++.. .+|.+ ...+|.|.|+.+++... .....+.
T Consensus 319 ~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~-----~~~~v----------~~vRg~Gl~~~iel~~~-~~~~~i~ 382 (429)
T PRK06173 319 CAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAA-----EFDSV----------AEVRVLGAIGVVEMKEP-VNMATLQ 382 (429)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-----cCCCe----------eeeeccceEEEEEeCCc-ccHHHHH
Confidence 7777777776543 23444455556666665321 12211 11245788999999643 2345566
Q ss_pred HHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhh
Q 009172 474 DALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 474 ~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~ 540 (541)
+.+...++-+...+ ..+...|+ |.+..++.+.+++.|+++|.+
T Consensus 383 ~~l~e~Gi~v~~~g-~~l~~~Pp-----------------------l~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 383 PRFVEHGIWVRPFG-KLVYIMPP-----------------------FIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred HHHHHCCeEEEecC-CEEEEeCC-----------------------ccCCHHHHHHHHHHHHHHHHH
Confidence 66655555443222 12323332 223446778888888888864
No 316
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.49 E-value=5.2e-12 Score=124.37 Aligned_cols=258 Identities=20% Similarity=0.280 Sum_probs=173.7
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHhCCCcEEE---eCCHHHHHHHHHHHhccCCCEEEEcCC-CCcchHHHH------Hhh
Q 009172 200 ASFEYGRYGNPTTVVVEEKMSALEGAESTVI---MASGMSASTVMLLALVPAGGHIVTTTD-CYRKTRIFI------ETV 269 (541)
Q Consensus 200 ~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~---~sSG~~Ai~~al~all~~GD~VIv~~~-~y~~~~~~~------~~~ 269 (541)
.+|.|. +-.++.|++..|+.+|++.+++ +-||+.||..+|..+++|||+++...- -|......+ ...
T Consensus 58 tGYGyd---D~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gS 134 (416)
T COG4100 58 TGYGYD---DLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGS 134 (416)
T ss_pred CCCCcc---ccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCccc
Confidence 455554 4457788999999999987654 579999999999999999999876443 343322222 123
Q ss_pred cccCCcEEEEeCCC-----CHHHHHHhccCCCeeEEEEeCC----CCCCCcccCHHHHHHHHHhC--CCEEEEEcCCCCC
Q 009172 270 LPKMGITATVIDPA-----DMEGLEAALNNNNVSLFFTESP----TNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATP 338 (541)
Q Consensus 270 l~~~Gi~v~~vd~~-----dle~Le~ai~~~~tklV~lesp----~NPtG~v~di~~Ia~la~~~--gillvvDea~a~~ 338 (541)
++.+|+.+..++.. |.+.+..++++ +||+|.+.-- .-|...+.+|+++.++.++. ++++.|||.|+.+
T Consensus 135 L~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEF 213 (416)
T COG4100 135 LKDFGIKYKAVPLTADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEF 213 (416)
T ss_pred HHHhCcceeecccccCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhh
Confidence 56678888877643 88999999998 4999998643 25677777888888888874 7999999999988
Q ss_pred Cc-ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh------hhcCCCccHHHHHHHHHhHHHHHHHHH
Q 009172 339 LN-QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH------HVLGGALNPNAAYLIIRGMKTLHLRVQ 411 (541)
Q Consensus 339 ~~-~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~------~~~g~~~s~~~a~l~l~~l~tl~~r~~ 411 (541)
+. ..|...|+|++..|+-|.-||.---.||++.++.++++...-.. ...|.++. ....+..++--......
T Consensus 214 vE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPGIG~e~Gat~~--~l~~myqGlFlAPhvv~ 291 (416)
T COG4100 214 VEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPGIGREGGATLY--SLREMYQGLFLAPHVVS 291 (416)
T ss_pred hhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCCccccccccHH--HHHHHHhhhccchHHHH
Confidence 75 56888999999999999998875556899999999988643211 11222221 11222334433333344
Q ss_pred HHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC
Q 009172 412 QQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI 478 (541)
Q Consensus 412 ~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~ 478 (541)
+..+-+...+.+|++. .+|. .|.+.- +..--+-++++. +.++...|+.+++.
T Consensus 292 qa~Kga~fta~~le~l------g~~~---~P~~~~-----kRtDlIQavkf~-~~eKmIaFcqaiQ~ 343 (416)
T COG4100 292 QAVKGAHFTARFLEKL------GFPV---NPKYDA-----KRTDLIQAVKFG-SKEKMIAFCQAIQA 343 (416)
T ss_pred HHhhhhHHHHHHHHHc------CCCC---CCcccc-----cccchhhheecC-CHHHHHHHHHHHhh
Confidence 4455666667777764 2222 222110 011124567775 45778888887753
No 317
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.49 E-value=7.9e-12 Score=134.31 Aligned_cols=288 Identities=15% Similarity=0.120 Sum_probs=172.6
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc-------cCCCEEEEcCCCCcchHHHHHhhcc-----
Q 009172 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PAGGHIVTTTDCYRKTRIFIETVLP----- 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all-------~~GD~VIv~~~~y~~~~~~~~~~l~----- 271 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++... ....+||.....|++.....-.+..
T Consensus 82 ~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~ 161 (428)
T PRK07986 82 GITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSM 161 (428)
T ss_pred ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhh
Confidence 45778889999999998754 567888999999999887432 1236899999888873311101000
Q ss_pred --cCC---cEEEEeC-----------CCCHHHHHHhccC--CCeeEEEEeCC-CCCCCccc-C---HHHHHHHHHhCCCE
Q 009172 272 --KMG---ITATVID-----------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCV-D---VKLVSDLCHKKGAI 328 (541)
Q Consensus 272 --~~G---i~v~~vd-----------~~dle~Le~ai~~--~~tklV~lesp-~NPtG~v~-d---i~~Ia~la~~~gil 328 (541)
.++ ..+.+++ ..|++++++.++. +++.+|++|.. ....|.+. + +++|.++|++||++
T Consensus 162 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~l 241 (428)
T PRK07986 162 HSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGIL 241 (428)
T ss_pred hhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 000 1111221 1356677777742 24889999985 55455543 2 88999999999999
Q ss_pred EEEEcCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-----hhcCCCccHHHHH
Q 009172 329 VCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGALNPNAAY 397 (541)
Q Consensus 329 lvvDea~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~-----~~~g~~~s~~~a~ 397 (541)
+|+||++... - .........|+++ ++|.++|+- +..|++++++++.+.+.... .......+|..+.
T Consensus 242 LI~DEv~tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~a 318 (428)
T PRK07986 242 LIADEIATGFGRTGKLFACEHAGIAPDILC--LGKALTGGT-MTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACA 318 (428)
T ss_pred EEEeccccCCccCCCeeeecccCCCCCEEE--echhhhCCc-ccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHH
Confidence 9999996321 1 1122223357775 899997431 23566778888888775411 1111224577777
Q ss_pred HHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHH
Q 009172 398 LIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDA 475 (541)
Q Consensus 398 l~l~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~ 475 (541)
.++..|+.+.. ..++..+..+++.+.|++.. .+|.+ .+.+|.|.|+.+++... .....+.+.
T Consensus 319 aa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~-----~~~~i----------~~vRg~Gl~~~ve~~~~-~~~~~~~~~ 382 (428)
T PRK07986 319 VANASLSLLESGDWQQQVAAIEAQLREELAPLR-----DAPMV----------ADVRVLGAIGVVETTRP-VNMAALQRF 382 (428)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-----cCCCE----------EeEeccceEEEEEeCCc-ccHHHHHHH
Confidence 77777776542 23444455555555555321 12211 12356788999999643 234456666
Q ss_pred cCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHhh
Q 009172 476 LKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 476 L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlS----vG~Ed~edli~dL~~AL~~ 540 (541)
+...|+-+...+ +.|||. +..|+.+.+++.|.++|++
T Consensus 383 l~~~Gl~~~~~g----------------------------~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 383 FVEQGVWIRPFG----------------------------KLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHCCcEEEecC----------------------------CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 654454333211 345554 3346777788888888763
No 318
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.49 E-value=7.2e-12 Score=142.52 Aligned_cols=148 Identities=16% Similarity=0.226 Sum_probs=114.4
Q ss_pred hHHHHHHHHHHHhCCCcEEEeC-CHHHHHHHHHHHhc----c---C-CCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 211 TTVVVEEKMSALEGAESTVIMA-SGMSASTVMLLALV----P---A-GGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~~~i~~s-SG~~Ai~~al~all----~---~-GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+|++.++++.|.+.+-+.. +|+.+..++++++- . + .++|+++...|+.+... +...|++++.++
T Consensus 544 ~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas----a~~~GieVv~Vp 619 (954)
T PRK12566 544 MIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS----AQMAGMRVVIVE 619 (954)
T ss_pred HHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH----HHHCCCEEEEec
Confidence 5678899999999998765555 77766666665542 1 2 36788999999776532 444689988886
Q ss_pred CC-----CHHHHHHhccC--CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCC-CC-cccccccCCcEEE
Q 009172 282 PA-----DMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-PL-NQKALSLGADLVL 352 (541)
Q Consensus 282 ~~-----dle~Le~ai~~--~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~-~~-~~~~l~~gaDivv 352 (541)
.+ |+++|++++++ .++++|.+.+|++-.+...|+++|+++||++|+++++|.+... .. ...|.++|+|+++
T Consensus 620 ~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~ 699 (954)
T PRK12566 620 CDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSH 699 (954)
T ss_pred cCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEE
Confidence 53 89999999872 2588899989987776767799999999999999999999753 22 3446889999999
Q ss_pred ECCccccCCC
Q 009172 353 HSATKFIGGH 362 (541)
Q Consensus 353 ~S~sK~lgg~ 362 (541)
.++||+|+++
T Consensus 700 ~s~HKtf~~P 709 (954)
T PRK12566 700 MNLHKTFCIP 709 (954)
T ss_pred ecCCcccCcC
Confidence 9999998744
No 319
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.49 E-value=4.5e-12 Score=144.93 Aligned_cols=213 Identities=15% Similarity=0.153 Sum_probs=145.7
Q ss_pred hHHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 211 TTVVVEEKMSALEGAEST-VIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~~~-i~~sSG~~Ai~~al~all~--------~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...++++.|+++.|.+.+ +..++|+.+..+.++++-. ..+.|+++...|+..... +...|++++.++
T Consensus 531 ~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPas----a~~~G~~Vv~V~ 606 (939)
T TIGR00461 531 LIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPAS----AAMAGMQVVPVN 606 (939)
T ss_pred HHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHH----HHHCCCEEEEec
Confidence 345778999999998754 4555666666555544321 235799999999776533 445688888886
Q ss_pred C-----CCHHHHHHhccC--CCeeEEEEeCCCCCCCcccC-HHHHHHHHHhCCCEEEEEcCCCC--CCcccccccCCcEE
Q 009172 282 P-----ADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLV 351 (541)
Q Consensus 282 ~-----~dle~Le~ai~~--~~tklV~lesp~NPtG~v~d-i~~Ia~la~~~gillvvDea~a~--~~~~~~l~~gaDiv 351 (541)
. .|+++|++++++ .+|++|++.+|+| +|.+.| +++|+++||++|.++++|.++.. ....+|.++|+|++
T Consensus 607 ~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~ 685 (939)
T TIGR00461 607 CDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVC 685 (939)
T ss_pred cCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEE
Confidence 5 389999999974 2599999999999 788877 99999999999999999999744 23456778999999
Q ss_pred EECCccccC-CC--CCceEEEEEeChHHHHHHHH--Hh---------hhcCCCcc----H----HHHHH--HHHhHHHHH
Q 009172 352 LHSATKFIG-GH--NDVLAGSISGSGKLVTQIRN--LH---------HVLGGALN----P----NAAYL--IIRGMKTLH 407 (541)
Q Consensus 352 v~S~sK~lg-g~--g~v~gG~vv~~~~li~~l~~--~~---------~~~g~~~s----~----~~a~l--~l~~l~tl~ 407 (541)
+.|.||+|+ ++ |.-..|++..++.+...+.. .. ...|...+ . ..+|+ ..-|-+.+.
T Consensus 686 ~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~ 765 (939)
T TIGR00461 686 HLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLP 765 (939)
T ss_pred EecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHH
Confidence 999999766 22 12235888887665443321 00 00111111 1 22333 333444555
Q ss_pred HHHHHHHHHHHHHHHHHHhCC
Q 009172 408 LRVQQQNSTALRMAEILEAHP 428 (541)
Q Consensus 408 ~r~~~~~~na~~la~~L~~~p 428 (541)
...+....|+.++++.|+++.
T Consensus 766 ~~a~~ailnAnYl~~rL~~~~ 786 (939)
T TIGR00461 766 KASVVAILNANYMATRLKDHY 786 (939)
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 555667789999999998754
No 320
>PRK06541 hypothetical protein; Provisional
Probab=99.48 E-value=2.5e-11 Score=131.67 Aligned_cols=240 Identities=14% Similarity=0.154 Sum_probs=150.7
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc--------CCCEEEEcCCCCcchHHHHHhhc-----
Q 009172 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP--------AGGHIVTTTDCYRKTRIFIETVL----- 270 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all~--------~GD~VIv~~~~y~~~~~~~~~~l----- 270 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++.... ...+||.....|++.....-...
T Consensus 91 ~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~ 170 (460)
T PRK06541 91 SYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAF 170 (460)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhh
Confidence 45678888999999998753 5788889999999998873321 13688888888888432211110
Q ss_pred -ccCC---cEEEEeCC----------CC--------HHHHHHhcc---CCCeeEEEEeCCCCCCCcccC----HHHHHHH
Q 009172 271 -PKMG---ITATVIDP----------AD--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (541)
Q Consensus 271 -~~~G---i~v~~vd~----------~d--------le~Le~ai~---~~~tklV~lesp~NPtG~v~d----i~~Ia~l 321 (541)
..++ ..+..++. ++ ++.+++.++ ++++.+|++|...++.|.+.+ +++|.++
T Consensus 171 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~l 250 (460)
T PRK06541 171 KAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREI 250 (460)
T ss_pred ccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHH
Confidence 0000 11122211 11 356777774 235889999988999999988 9999999
Q ss_pred HHhCCCEEEEEcCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--hc--CCCc
Q 009172 322 CHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VL--GGAL 391 (541)
Q Consensus 322 a~~~gillvvDea~a~~-~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~--~~--g~~~ 391 (541)
|++||+++|+||++... -. ........|+++ ++|.++++ -...|++++++++.+.+..... .+ ....
T Consensus 251 c~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~~G-~~pigav~~~~~i~~~~~~~~~~~~~~~T~~g 327 (460)
T PRK06541 251 CDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGITSG-YSPLGAMIASDRLFEPFLDGPTMFLHGYTFGG 327 (460)
T ss_pred HHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--ecccccCC-ccceeEEEEcHHHHHHhhcCCCccccCCCCCC
Confidence 99999999999997321 11 111223368775 89999853 1135777788888776653211 11 2234
Q ss_pred cHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009172 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
+|..+.+++..++.+.. ..++..+..+++.+.|++... +|.. .+.+|.|.|+.+++.
T Consensus 328 np~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-----~~~v----------~~vrg~Gl~~~ie~~ 386 (460)
T PRK06541 328 HPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-----LPIV----------GDVRGDGYFYGIELV 386 (460)
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-----CCCe----------EEEEecceEEEEEEe
Confidence 56777777777766532 234455566666666655311 1110 123567889999984
No 321
>PLN02590 probable tyrosine decarboxylase
Probab=99.48 E-value=2.8e-11 Score=132.66 Aligned_cols=258 Identities=15% Similarity=0.162 Sum_probs=162.1
Q ss_pred CCCCCCCchhHHHHHH----HHHHHhCCCc---------EEEeCCHHHHHHHHHHHh----cc-------CCCEEEEcCC
Q 009172 202 FEYGRYGNPTTVVVEE----KMSALEGAES---------TVIMASGMSASTVMLLAL----VP-------AGGHIVTTTD 257 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~----~LA~l~g~~~---------~i~~sSG~~Ai~~al~al----l~-------~GD~VIv~~~ 257 (541)
..++....|...++|+ +|++++|.++ .+++++|++|+..++.+. ++ +.-.|++++.
T Consensus 158 ~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~ 237 (539)
T PLN02590 158 VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQ 237 (539)
T ss_pred ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCC
Confidence 3445556666666654 5666677532 578888999887776542 11 1124556777
Q ss_pred CCcchHHHHHhh-cccCCcEEEEeC-----CCCHHHHHHhccCC-----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCC
Q 009172 258 CYRKTRIFIETV-LPKMGITATVID-----PADMEGLEAALNNN-----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 326 (541)
Q Consensus 258 ~y~~~~~~~~~~-l~~~Gi~v~~vd-----~~dle~Le~ai~~~-----~tklV~lesp~NPtG~v~di~~Ia~la~~~g 326 (541)
.|.+.......+ +....+..+.+| ..|+++|+++|.++ .+-+|+....+-.+|.+-|+++|+++|++||
T Consensus 238 aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g 317 (539)
T PLN02590 238 THSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYG 317 (539)
T ss_pred chHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhC
Confidence 887765433211 111123333344 13899999998542 2456666667778999999999999999999
Q ss_pred CEEEEEcCCCCCCcccc----ccc---CCcEEEECCccccCCCCCceEEEEEeCh--HHHHHHHH---Hhh---------
Q 009172 327 AIVCIDGTFATPLNQKA----LSL---GADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRN---LHH--------- 385 (541)
Q Consensus 327 illvvDea~a~~~~~~~----l~~---gaDivv~S~sK~lgg~g~v~gG~vv~~~--~li~~l~~---~~~--------- 385 (541)
++++||.+|+......+ +.. .+|-+..++||++.-+-+ .|+++.++ .+.+.+.. +..
T Consensus 318 ~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~--cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~ 395 (539)
T PLN02590 318 IWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQT--CSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTV 395 (539)
T ss_pred CeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcC--EEEEEecCHHHHHHHhhcCHHHhCCcccccccC
Confidence 99999999987543221 122 379999999999987653 56666553 23222211 110
Q ss_pred --------hcCCCccHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcc
Q 009172 386 --------VLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFG 455 (541)
Q Consensus 386 --------~~g~~~s~~~a~l~l~--~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g 455 (541)
..+-....+..|+.++ |.+.+..++++..+.++++.+.|+++|.++-+..|.+
T Consensus 396 ~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l----------------- 458 (539)
T PLN02590 396 VNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYF----------------- 458 (539)
T ss_pred CCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCce-----------------
Confidence 0111123345566554 4567888899999999999999999988765544432
Q ss_pred cEEEEEEcC---CH----HHHHHHHHHcCC
Q 009172 456 GVVSFEVDG---DL----TATIKFIDALKI 478 (541)
Q Consensus 456 ~~vsf~l~g---~~----~~~~~~l~~L~~ 478 (541)
++|.|.+.+ +. ....++++++..
T Consensus 459 ~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~ 488 (539)
T PLN02590 459 SLVCFRLAPVDGDEDQCNERNRELLAAVNS 488 (539)
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 578888763 11 223456666543
No 322
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.48 E-value=2.9e-11 Score=130.73 Aligned_cols=234 Identities=13% Similarity=0.084 Sum_probs=140.1
Q ss_pred CCchhHHHHHHHHHHHhCC----CcEEEe-CCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc----c--C
Q 009172 207 YGNPTTVVVEEKMSALEGA----ESTVIM-ASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP----K--M 273 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~----~~~i~~-sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~----~--~ 273 (541)
+.++...+|.++|+++.+. ...+++ +||++|+..+++.. .....+||.....|++.......+.. + +
T Consensus 79 ~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~ 158 (442)
T TIGR00709 79 LTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAV 158 (442)
T ss_pred cCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccC
Confidence 5788889999999998753 244554 79999999998743 22346788888888885433221111 0 0
Q ss_pred C---cEEEEeCCCC-------------H----HHHHHhcc-----CCCeeEEEEeCCCCCCCccc-C---HHHHHHHHHh
Q 009172 274 G---ITATVIDPAD-------------M----EGLEAALN-----NNNVSLFFTESPTNPFLRCV-D---VKLVSDLCHK 324 (541)
Q Consensus 274 G---i~v~~vd~~d-------------l----e~Le~ai~-----~~~tklV~lesp~NPtG~v~-d---i~~Ia~la~~ 324 (541)
+ ..+.+++..+ . +.+++.+. .+++.+|++|.+.+..|.+. | +++|.++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~ 238 (442)
T TIGR00709 159 GMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRK 238 (442)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 0 1122222111 1 12333332 12589999999887777664 3 7899999999
Q ss_pred CCCEEEEEcCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHH
Q 009172 325 KGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYL 398 (541)
Q Consensus 325 ~gillvvDea~a~~-~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l 398 (541)
||+++|.||++... .. ......-.|+++ ++|.+++ | ...|+++++++ ++.+...........+|..+.+
T Consensus 239 ~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~-G-~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aa 313 (442)
T TIGR00709 239 HDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVGG-G-LPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVT 313 (442)
T ss_pred cCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--EcccccC-C-cccEEEEEchH-HhccCCCcCCCCCCcCHHHHHH
Confidence 99999999996532 11 112223468888 8999987 4 45667777766 3433211111112246777777
Q ss_pred HHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009172 399 IIRGMKTLHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 399 ~l~~l~tl~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
++..|+.+.. -.++..+...++.+.|++ +|.|.. .+|.|.|+.+++.
T Consensus 314 a~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~------------------vrG~Gl~~~ie~~ 366 (442)
T TIGR00709 314 GTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGN------------------VRGRGLMQGIMIV 366 (442)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeee------------------eeccceEEEEEEc
Confidence 7777766532 122333344444444443 333322 3567889999985
No 323
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.48 E-value=1.4e-11 Score=133.33 Aligned_cols=289 Identities=14% Similarity=0.152 Sum_probs=173.3
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc-------cC-CCEEEEcCCCCcchHHHHHhhc-----
Q 009172 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PA-GGHIVTTTDCYRKTRIFIETVL----- 270 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all-------~~-GD~VIv~~~~y~~~~~~~~~~l----- 270 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++... .+ ..+||.....|++.....-.+-
T Consensus 93 ~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~ 172 (453)
T PRK06943 93 GCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALF 172 (453)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhh
Confidence 45678888999999998864 468888999999999987531 12 3679999999988431110000
Q ss_pred -ccCC---cEEEEeCC-----------------CCHHHHHHhcc--CCCeeEEEEeC-CCCCCCcccC----HHHHHHHH
Q 009172 271 -PKMG---ITATVIDP-----------------ADMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 271 -~~~G---i~v~~vd~-----------------~dle~Le~ai~--~~~tklV~les-p~NPtG~v~d----i~~Ia~la 322 (541)
..++ ..+..++. .+++++++.++ .+++.+|++|. +....|.+.+ +++|.++|
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc 252 (453)
T PRK06943 173 KDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALC 252 (453)
T ss_pred hcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHH
Confidence 0000 01112211 12467777774 23589999998 4766776654 78999999
Q ss_pred HhCCCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh----hhcCCC--
Q 009172 323 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLGGA-- 390 (541)
Q Consensus 323 ~~~gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~----~~~g~~-- 390 (541)
++||+++|.||++... +..+....-.|+++ +.|.++++- ...|.+++++++.+.+.... ...+.+
T Consensus 253 ~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt--~gKgl~gG~-~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~ 329 (453)
T PRK06943 253 DRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLC--LSKGISGGY-LPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYT 329 (453)
T ss_pred HHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEe--eehhhccCc-ccceEEEEcHHHHHhhcccCccCCccCCCCCC
Confidence 9999999999995432 11222333468888 689998641 23577778888877664210 012222
Q ss_pred ccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC---
Q 009172 391 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD--- 465 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~--- 465 (541)
-+|..+.+++..|+.+.. -+++..+..+++.+.|++.. .+|.+ .+.+|.|.|+.+++..+
T Consensus 330 gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-----~~~~v----------~~vrG~Gl~~gvel~~~~~~ 394 (453)
T PRK06943 330 GNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLA-----AHPQV----------RHLRQRGTIFAFDVALDGDA 394 (453)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-----cCCCE----------EeEeccccEEEEEEccCCCc
Confidence 367777777777776543 12333344444555554320 12221 12357888999999622
Q ss_pred -HHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHHhh
Q 009172 466 -LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADVLQALHA 540 (541)
Q Consensus 466 -~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlS----vG~Ed~edli~dL~~AL~~ 540 (541)
.....++...+...++-+... .+.+||+ +..++.+.+++.|+++|++
T Consensus 395 ~~~~~~~i~~~~~~~Gll~~~~----------------------------g~~l~~~Ppl~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 395 ARTFSRRFFEAALERELLLRPI----------------------------GTTVYLMPPYVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred chHHHHHHHHHHHHCCcEEEec----------------------------CCEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 122445555554444322111 1346666 3446777888888888764
No 324
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=2.5e-11 Score=131.06 Aligned_cols=283 Identities=12% Similarity=0.087 Sum_probs=169.2
Q ss_pred CCCchhHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhc-----cc--C
Q 009172 206 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL-----PK--M 273 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g---~~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l-----~~--~ 273 (541)
.+.++...+|.++|+++.+ .+.+++++||++|+..+++.. ....++|+.....|++.....-.+- .+ +
T Consensus 93 ~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 172 (441)
T PRK05769 93 DFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGF 172 (441)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCC
Confidence 4668888999999999875 256788899999999998732 2234678888888888542221110 00 0
Q ss_pred ---CcEEEEeCC----------CC--------HHHHHH-hc----cCCCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009172 274 ---GITATVIDP----------AD--------MEGLEA-AL----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 274 ---Gi~v~~vd~----------~d--------le~Le~-ai----~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~ 323 (541)
.-.+..++. .+ ++.+++ .+ ..+++.+|++|......|.+.| +++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~ 252 (441)
T PRK05769 173 FPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLAD 252 (441)
T ss_pred CCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHH
Confidence 011222221 11 233555 22 2235899999999888899888 999999999
Q ss_pred hCCCEEEEEcCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCC--CccHHH
Q 009172 324 KKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNA 395 (541)
Q Consensus 324 ~~gillvvDea~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~--~~s~~~ 395 (541)
+||+++|+||++... . .........|+++ ++|.++++ ...|++++++++.+.+.. ..+. ..+|..
T Consensus 253 ~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt--~~K~l~~G--~p~gav~~~~~i~~~~~~---~~~~T~~g~p~~ 325 (441)
T PRK05769 253 KYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIIT--LAKAIAGG--LPLGAVIGRAELMFLPPG---SHANTFGGNPVA 325 (441)
T ss_pred HcCCEEEEechhhCCCcccceehhhccCCCCCEEE--EcccccCC--cccEEEEEehhhhhcCCC---CCCCCCCcCHHH
Confidence 999999999996532 1 1111222358875 78999853 356778888877643221 1222 235666
Q ss_pred HHHHHHhHHHHHH-HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-----
Q 009172 396 AYLIIRGMKTLHL-RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----- 465 (541)
Q Consensus 396 a~l~l~~l~tl~~-r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~----- 465 (541)
+..++..|+.+.. ..++..+..+++.+.|++ ++.+. ..+|.|.|+.+++..+
T Consensus 326 ~aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~------------------~vrg~G~~~~i~~~~~~~~~~ 387 (441)
T PRK05769 326 AAAALATLEELEEGLLENAQKLGEYLRKELKELKEKYEFIG------------------DVRGLGLMIGVELVKDRKEPD 387 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCee------------------eeecceEEEEEEeccCCcccc
Confidence 6666666666543 223333444555554543 22221 1256788999998532
Q ss_pred HHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009172 466 LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 466 ~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~~ 540 (541)
......+.+.+...|+-+.. ...+.|||+.-+ ++++.+++.|+++|.+
T Consensus 388 ~~~~~~~~~~~~~~Gil~~~---------------------------~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 388 PKLRDKVLYEAFKRGLLLLG---------------------------AGKSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred HHHHHHHHHHHHhCCcEEec---------------------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 12344555555443432211 013567887655 4556666677666654
No 325
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.47 E-value=3.5e-11 Score=130.46 Aligned_cols=288 Identities=15% Similarity=0.146 Sum_probs=168.4
Q ss_pred CCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhccc-------C
Q 009172 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPK-------M 273 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~---~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~~-------~ 273 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++.. .....+||.....|++.....-.+-.. +
T Consensus 93 ~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 172 (451)
T PRK06918 93 VMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGF 172 (451)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccC
Confidence 44678888999999999863 46788899999999998743 223457888888888854222111000 0
Q ss_pred C---cEEEEeCCCC-----------------HHHHHHhc----cCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhC
Q 009172 274 G---ITATVIDPAD-----------------MEGLEAAL----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (541)
Q Consensus 274 G---i~v~~vd~~d-----------------le~Le~ai----~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~ 325 (541)
+ ..+..++..+ ++.+++.+ .++++.+|++|......|.+++ +++|.++|++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~ 252 (451)
T PRK06918 173 GPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH 252 (451)
T ss_pred CCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc
Confidence 1 1122221110 12344333 2335889999887766676554 77999999999
Q ss_pred CCEEEEEcCCCCCC-cccc---cccC--CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHH
Q 009172 326 GAIVCIDGTFATPL-NQKA---LSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLI 399 (541)
Q Consensus 326 gillvvDea~a~~~-~~~~---l~~g--aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~ 399 (541)
|+++|+||++.... ...+ ..++ .|++ |++|.+++ | ...|++++++++.+.+...........++..+.++
T Consensus 253 gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l~~-G-~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa 328 (451)
T PRK06918 253 GILFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSLGA-G-VPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAA 328 (451)
T ss_pred CCEEEEeccccCcCccCceehhHhcCCCCCEE--eeehhhcC-C-CccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHH
Confidence 99999999975431 1111 1233 5644 79999985 3 46788889988887765332222233456666665
Q ss_pred HHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-------CH
Q 009172 400 IRGMKTLHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG-------DL 466 (541)
Q Consensus 400 l~~l~tl~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g-------~~ 466 (541)
+..++.+.. ..++..+..+++.+.|++ ++.+.. .+|.|.|+.+++.. +.
T Consensus 329 ~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~------------------vrg~G~~~~~~~~~~~~~~~~~~ 390 (451)
T PRK06918 329 LAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGD------------------VRGLGAMCAFELVQDRKTKEPDK 390 (451)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCcee------------------eccceeEEEEEEccCCCcCCCcH
Confidence 555554421 112222333444444443 222211 13567888887731 22
Q ss_pred HHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhh
Q 009172 467 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALHA 540 (541)
Q Consensus 467 ~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~~ 540 (541)
+....+.+.+...++.+..++. ..+.|||++.+ ++.++.++.|.++|..
T Consensus 391 ~~~~~l~~~~~~~Gvlv~~~~~-------------------------~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 391 TLTANICKEANKRGLLLLSAGT-------------------------YGNVIRVLMPLVITDEQLEEGLTIIEESLQA 443 (451)
T ss_pred HHHHHHHHHHHHCCeEEeecCC-------------------------CCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 3456677666655554433211 13679999765 3455566666666653
No 326
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.47 E-value=1.2e-11 Score=132.74 Aligned_cols=286 Identities=14% Similarity=0.119 Sum_probs=167.6
Q ss_pred CCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHhhcc----
Q 009172 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVLP---- 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g--~~~~i~~sSG~~Ai~~al~all~-------~G-D~VIv~~~~y~~~~~~~~~~l~---- 271 (541)
.+.++...+|.++|+++.+ .+.+++++||++|+..+++.... +| .+||.....|++.....-.+..
T Consensus 79 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~ 158 (422)
T PRK05630 79 GLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGG 158 (422)
T ss_pred CcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCccc
Confidence 3567788899999999875 35788999999999998874321 22 5789888888884321111100
Q ss_pred ---cCC---cEEEEeCC--------CC----HHHHHHhccCCCeeEEEEeCC-CCCCCcccC----HHHHHHHHHhCCCE
Q 009172 272 ---KMG---ITATVIDP--------AD----MEGLEAALNNNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAI 328 (541)
Q Consensus 272 ---~~G---i~v~~vd~--------~d----le~Le~ai~~~~tklV~lesp-~NPtG~v~d----i~~Ia~la~~~gil 328 (541)
.++ ..+.+++. .+ .+.+++.+.+ ++.+|++|.. ....|.+.+ +++|.++|++||++
T Consensus 159 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~l 237 (422)
T PRK05630 159 MHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDIL 237 (422)
T ss_pred ccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 000 01122211 11 2445555654 5999999985 666676554 77999999999999
Q ss_pred EEEEcCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh----hhcC--CCccHHHH
Q 009172 329 VCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH----HVLG--GALNPNAA 396 (541)
Q Consensus 329 lvvDea~a~~-~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~----~~~g--~~~s~~~a 396 (541)
+|+||++... -. ......-.||+ +++|.++|+- ..+|++++++++.+.+.... ..++ ...+|..+
T Consensus 238 lI~DEv~tG~GrtG~~~a~~~~gv~PDi~--t~gK~l~gG~-~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~ 314 (422)
T PRK05630 238 LIADEIATGFGRTGELFATLAAGVTPDIM--CVGKALTGGF-MSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLAC 314 (422)
T ss_pred EEEecceeCCCcCchhhHHHhcCCCCCee--eeechhhcCc-cccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHH
Confidence 9999996321 11 11122335777 5899996531 13677888888887764210 0112 23467777
Q ss_pred HHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHH
Q 009172 397 YLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 474 (541)
Q Consensus 397 ~l~l~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~ 474 (541)
..++..++.+.. ..++..+...++.+.|+.. . .+|.+ .+.+|.|.|+.+++... .....+.+
T Consensus 315 aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l---~--~~~~v----------~~vRg~Gl~~~ie~~~~-~~~~~~~~ 378 (422)
T PRK05630 315 AVAHASLEIIETGMWRKQVKRIEAELIAGLSPL---A--HLPGV----------ADVRVLGAIGVVEMEQP-VDMEEATQ 378 (422)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHh---h--cCCCe----------eeeeccccEEEEEECCc-ccHHHHHH
Confidence 776666766543 1233334444455544421 1 12221 12356789999999642 22345555
Q ss_pred HcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHh
Q 009172 475 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALH 539 (541)
Q Consensus 475 ~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG----~Ed~edli~dL~~AL~ 539 (541)
.+...++-+...+ +.|||..- .++.+.+++.|+++|.
T Consensus 379 ~~~~~Gl~~~~~g----------------------------~~l~~~PpL~it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 379 AAVDHGVWLRPFG----------------------------RLVYVMPPYITTSEQIAQICAALAAAVK 419 (422)
T ss_pred HHHHCCeEEEecC----------------------------CEEEEECCccCCHHHHHHHHHHHHHHHh
Confidence 5544443332111 34454443 3567777777777775
No 327
>PRK07481 hypothetical protein; Provisional
Probab=99.47 E-value=3.6e-11 Score=130.12 Aligned_cols=286 Identities=13% Similarity=0.127 Sum_probs=170.0
Q ss_pred CCchhHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHhhc-----
Q 009172 207 YGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVL----- 270 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g---~~~~i~~sSG~~Ai~~al~all~-------~G-D~VIv~~~~y~~~~~~~~~~l----- 270 (541)
+.+|...+|.++|+++.+ .+.+++++||++|+..+++.... +| .+||.....|++.....-.+-
T Consensus 83 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 162 (449)
T PRK07481 83 TTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVF 162 (449)
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccc
Confidence 467888999999999874 35678889999999999874321 23 578888888888432110100
Q ss_pred -ccCC---cEEEEeC--------C--CCHHH--------HHHhcc---CCCeeEEEEeCCCCCCCcccC----HHHHHHH
Q 009172 271 -PKMG---ITATVID--------P--ADMEG--------LEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDL 321 (541)
Q Consensus 271 -~~~G---i~v~~vd--------~--~dle~--------Le~ai~---~~~tklV~lesp~NPtG~v~d----i~~Ia~l 321 (541)
..++ ..+..++ . .|++. +++++. ++++.+|++|......|.+.+ +++|.++
T Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~l 242 (449)
T PRK07481 163 RRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREV 242 (449)
T ss_pred ccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHH
Confidence 0000 1122221 1 13333 344442 235899999998877787665 8899999
Q ss_pred HHhCCCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-----hhcCCC
Q 009172 322 CHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-----HVLGGA 390 (541)
Q Consensus 322 a~~~gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~-----~~~g~~ 390 (541)
|++||+++|.||++... +.......-.||++ ++|.++++- +..|++++++++.+.+.... ..++.+
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T 319 (449)
T PRK07481 243 CDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMC--LAKGITSGY-VPLGATMVNARIADAFEANADFGGAIMHGYT 319 (449)
T ss_pred HHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEE--EeecccCCC-cCceEEEEcHHHHHHHhccCccccccccCCC
Confidence 99999999999995432 11222233468887 689998642 12577778888877765311 112222
Q ss_pred --ccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEE
Q 009172 391 --LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 462 (541)
Q Consensus 391 --~s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l 462 (541)
-+|..+.+++..|+.+.. -.++..+..+++.+.|++ +|.+. +.+|.|.|+.+++
T Consensus 320 ~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrG~Glm~gi~l 381 (449)
T PRK07481 320 YSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVG------------------DVRGKGLMLALDL 381 (449)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeE------------------EEeecceEEEEEe
Confidence 357777776666665532 123333444455555543 22222 2356788999998
Q ss_pred cCC----------HHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEe----cCCCHH
Q 009172 463 DGD----------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF----GVEDFE 528 (541)
Q Consensus 463 ~g~----------~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv----G~Ed~e 528 (541)
..+ ......+...+...|+-+... .+.+||+- ..++.+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----------------------------g~~i~l~Ppl~it~~eid 433 (449)
T PRK07481 382 VADKATREPIDPSKGYANAVADVARENGVLVRPS----------------------------GTKIILSPPLVIQREDVD 433 (449)
T ss_pred cccccccCCCCchhHHHHHHHHHHHhCCeEEEec----------------------------CCEEEEECCCCCCHHHHH
Confidence 521 122344555554444333221 12356653 346777
Q ss_pred HHHHHHHHHHhhC
Q 009172 529 DLKADVLQALHAI 541 (541)
Q Consensus 529 dli~dL~~AL~~i 541 (541)
.+++.|+++|.++
T Consensus 434 ~~~~~l~~~l~~~ 446 (449)
T PRK07481 434 RIVDALDAGLSAV 446 (449)
T ss_pred HHHHHHHHHHHhc
Confidence 7888888887653
No 328
>PLN02263 serine decarboxylase
Probab=99.46 E-value=5.6e-11 Score=127.55 Aligned_cols=222 Identities=16% Similarity=0.126 Sum_probs=153.5
Q ss_pred CCCCCCC---CchhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhhcc
Q 009172 201 SFEYGRY---GNPTTVVVEEKMSALEGAE----STVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLP 271 (541)
Q Consensus 201 ~~~Y~R~---~~p~~~~Le~~LA~l~g~~----~~i~~sSG~~Ai~~al~all--~~GD~VIv~~~~y~~~~~~~~~~l~ 271 (541)
.+.++.| ....-.++-+.+++++|.+ ..+++++|++++..++.+.- .+...|+++...|.+.. +.+.
T Consensus 121 p~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~----KAa~ 196 (470)
T PLN02263 121 PFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAAR 196 (470)
T ss_pred ccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHH----HHHH
Confidence 4555544 2333445667788888863 26888999999988876542 23447888999998865 3444
Q ss_pred cCCcEEEEeCC-----CCHHHHHHhccCCC--eeEEEEeCCCCCCCcccCHHHHHHHHHhCCC-----EEEEEcCCCCCC
Q 009172 272 KMGITATVIDP-----ADMEGLEAALNNNN--VSLFFTESPTNPFLRCVDVKLVSDLCHKKGA-----IVCIDGTFATPL 339 (541)
Q Consensus 272 ~~Gi~v~~vd~-----~dle~Le~ai~~~~--tklV~lesp~NPtG~v~di~~Ia~la~~~gi-----llvvDea~a~~~ 339 (541)
.+|++++.++. .|+++|+++|.++. +-+|+....+-++|.+-|+++|+++|+++|+ +++||.+|+..+
T Consensus 197 llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~ 276 (470)
T PLN02263 197 MYRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLM 276 (470)
T ss_pred hcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhH
Confidence 55677666653 38999999887542 4566677788899999999999999999997 999999987643
Q ss_pred c---cc--c--cccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH---h-----hhcCCCc--cHHHHHHHHH-
Q 009172 340 N---QK--A--LSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---H-----HVLGGAL--NPNAAYLIIR- 401 (541)
Q Consensus 340 ~---~~--~--l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~---~-----~~~g~~~--s~~~a~l~l~- 401 (541)
. .. . ...++|-+..+.||+++.+- ..|+++.+++..+.+... . ...|+.. .+...|..++
T Consensus 277 lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~--~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~ 354 (470)
T PLN02263 277 MPFVKRAPKVTFKKPIGSVSVSGHKFVGCPM--PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR 354 (470)
T ss_pred hhhcccccccCCCcCccEEEECCccccCCCc--CEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHH
Confidence 2 11 1 12248889999999998765 367777766554333211 1 1122222 2455666554
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 009172 402 -GMKTLHLRVQQQNSTALRMAEILEAHP 428 (541)
Q Consensus 402 -~l~tl~~r~~~~~~na~~la~~L~~~p 428 (541)
|.+.+..++++..++++++.+.|++.+
T Consensus 355 ~G~~G~~~~i~~~~~~A~~l~~~l~~~g 382 (470)
T PLN02263 355 KGYRGFQKEVQKCLRNAHYLKDRLREAG 382 (470)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 456788889999999999999999873
No 329
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.46 E-value=1.2e-13 Score=141.67 Aligned_cols=176 Identities=22% Similarity=0.303 Sum_probs=50.6
Q ss_pred HHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCC---CcchHHHHHhhcccCCcEEEEeCC---CCHHH
Q 009172 214 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC---YRKTRIFIETVLPKMGITATVIDP---ADMEG 287 (541)
Q Consensus 214 ~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~---y~~~~~~~~~~l~~~Gi~v~~vd~---~dle~ 287 (541)
.+++.++.+.|+++++++++..+|+.+++.++. +|.+||++.-. +++.++. ..++..-|..++.|-. ..+++
T Consensus 51 ~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRi-p~vm~~sGa~lvEVGttN~t~~~D 128 (367)
T PF03841_consen 51 HVEELLCELTGAEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRI-PDVMRQSGARLVEVGTTNRTHLSD 128 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc-cccccccccccccccccccccccc
Confidence 567889999999999999999999999988876 47788887653 5554442 2456666777766643 35889
Q ss_pred HHHhccCCCeeEEEEeCCCCCC--C--cccCHHHHHHHHHhCCCEEEEEcCCC------------CCCcccccccCCcEE
Q 009172 288 LEAALNNNNVSLFFTESPTNPF--L--RCVDVKLVSDLCHKKGAIVCIDGTFA------------TPLNQKALSLGADLV 351 (541)
Q Consensus 288 Le~ai~~~~tklV~lesp~NPt--G--~v~di~~Ia~la~~~gillvvDea~a------------~~~~~~~l~~gaDiv 351 (541)
++++|+++ |.+++--+++|.. | .-.+++++++++|+|++++++|..-+ .+-....+..|+|+|
T Consensus 129 ye~AI~e~-Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV 207 (367)
T PF03841_consen 129 YEKAITEN-TAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLV 207 (367)
T ss_dssp ---------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEE
T ss_pred cccccccc-ccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEE
Confidence 99999984 9988777888874 3 23589999999999999999998731 122234567899999
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHH
Q 009172 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNA 395 (541)
Q Consensus 352 v~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~ 395 (541)
++|..|.+||+. +|+++|++++++++++..-......+-..
T Consensus 208 ~fSGdKlLGGPQ---aGiI~Gkk~lI~~lk~~pl~RalrvdK~t 248 (367)
T PF03841_consen 208 TFSGDKLLGGPQ---AGIIVGKKELIEKLKKHPLGRALRVDKLT 248 (367)
T ss_dssp EEETTSSSSS-S----EEEEEEHHHHHHHHHHHHTTT-B--HHH
T ss_pred EEECCCcCCCCC---eEEEEeCHHHHHHHhhCCCcceEeeCHHH
Confidence 999999999986 89999999999999865433333334333
No 330
>PRK06062 hypothetical protein; Provisional
Probab=99.46 E-value=3.6e-11 Score=130.18 Aligned_cols=203 Identities=12% Similarity=0.100 Sum_probs=132.0
Q ss_pred CCCCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc------
Q 009172 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP------ 271 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~------ 271 (541)
+....+.++...+|.++|+++... +.+++++||++|+..+++.. .....+||.....|++.....-..-.
T Consensus 87 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~ 166 (451)
T PRK06062 87 TVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWP 166 (451)
T ss_pred CcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCccccc
Confidence 334467788889999999998753 57888899999999998743 22346788888888885322111100
Q ss_pred ----cCCcEEEEeC---------CCC-------HHHHHHhccC---CCeeEEEEeCCCCCCCcccC----HHHHHHHHHh
Q 009172 272 ----KMGITATVID---------PAD-------MEGLEAALNN---NNVSLFFTESPTNPFLRCVD----VKLVSDLCHK 324 (541)
Q Consensus 272 ----~~Gi~v~~vd---------~~d-------le~Le~ai~~---~~tklV~lesp~NPtG~v~d----i~~Ia~la~~ 324 (541)
..|+.....+ ..| ++.+++.++. +++.+|++|......|.+.| +++|.++|++
T Consensus 167 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~ 246 (451)
T PRK06062 167 NDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDR 246 (451)
T ss_pred CCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH
Confidence 0122111111 012 5677777742 35899999999888898888 9999999999
Q ss_pred CCCEEEEEcCCCCC----Cc--ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcC--CCccHHHH
Q 009172 325 KGAIVCIDGTFATP----LN--QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG--GALNPNAA 396 (541)
Q Consensus 325 ~gillvvDea~a~~----~~--~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g--~~~s~~~a 396 (541)
||+++|+||++... .. ........|+++ ++|.++++- +..|.+++++++.+.+.......+ ...+|..+
T Consensus 247 ~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t--~gK~lggG~-~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~ 323 (451)
T PRK06062 247 HGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLIT--FAKGVNSGY-VPLGGVAISEAIAATFADRPYPGGLTYSGHPLAC 323 (451)
T ss_pred cCCEEEeeccccCCCcCcHHHHHHhcCCCCCeee--echhhhcCC-cCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHH
Confidence 99999999996532 11 222233467665 899998641 124666777788777643211122 22357777
Q ss_pred HHHHHhHHHHH
Q 009172 397 YLIIRGMKTLH 407 (541)
Q Consensus 397 ~l~l~~l~tl~ 407 (541)
.+++..|+.+.
T Consensus 324 Aaa~a~L~~l~ 334 (451)
T PRK06062 324 AAAVATINAME 334 (451)
T ss_pred HHHHHHHHHHH
Confidence 77777777654
No 331
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.45 E-value=9.5e-11 Score=127.03 Aligned_cols=284 Identities=15% Similarity=0.107 Sum_probs=169.0
Q ss_pred CchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhc-----cc--CC--
Q 009172 208 GNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVL-----PK--MG-- 274 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l-----~~--~G-- 274 (541)
.++...+|.++|+++.+. +.+.+++||++|+..+++.. .....+||.....|++.......+. .+ ++
T Consensus 94 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 173 (457)
T PRK05639 94 HSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPL 173 (457)
T ss_pred CCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCC
Confidence 457778899999998764 46888999999999998743 2234578888888888432211110 00 11
Q ss_pred -cEEEEeCCC-------------CH--------HHHHHhc-----cCCCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009172 275 -ITATVIDPA-------------DM--------EGLEAAL-----NNNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 275 -i~v~~vd~~-------------dl--------e~Le~ai-----~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~ 323 (541)
-.+.+++.. +. +.+++.+ ..+++.+|++|......|.+.| +++|.++|+
T Consensus 174 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~ 253 (457)
T PRK05639 174 MPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLD 253 (457)
T ss_pred CCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 112333221 12 2345443 1336999999998877787665 789999999
Q ss_pred hCCCEEEEEcCCCCC----C--cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHH
Q 009172 324 KKGAIVCIDGTFATP----L--NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAY 397 (541)
Q Consensus 324 ~~gillvvDea~a~~----~--~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~ 397 (541)
+||+++|+||++... . .......-.|+++ ++|.++++. ..|++++++++.+. ...........+|..+.
T Consensus 254 ~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG~--pi~av~~~~~i~~~-~~~~~~~T~~g~p~~~a 328 (457)
T PRK05639 254 EHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVASGM--GLSGVIGRKELMDL-TSGSALLTPAANPVISA 328 (457)
T ss_pred HcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcCCC--cceeEEehHHHHhh-cCCCcccCCCcCHHHHH
Confidence 999999999996531 1 1122233468888 899998642 35778888888772 11111112234677776
Q ss_pred HHHHhHHHHHHH--HHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-----H
Q 009172 398 LIIRGMKTLHLR--VQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-----L 466 (541)
Q Consensus 398 l~l~~l~tl~~r--~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-----~ 466 (541)
+++..++.+... .++..+..+++.+.|++ ++.+.. .+|.|.|+.+++..+ .
T Consensus 329 aa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~------------------VrG~Gl~~gve~~~~~~~~~~ 390 (457)
T PRK05639 329 AAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGD------------------VRGKGLMIGVEIVKENGKPDP 390 (457)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEe------------------eccceeEEEEEEecCCCCCCH
Confidence 666666655321 23333444455554543 332222 256788999998431 2
Q ss_pred HHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009172 467 TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 467 ~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~ 539 (541)
+....+.+.+...|+-+... |...+.|||+.-+ ++.+.+++.|+++|+
T Consensus 391 ~~~~~~~~~~~~~Gv~~~~~-------------------------g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~ 442 (457)
T PRK05639 391 ELTGKICWRAFELGLILPSY-------------------------GMFGNVIRITPPLVITKEIAEKGLEIMERAIK 442 (457)
T ss_pred HHHHHHHHHHHhCCeEEeec-------------------------CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH
Confidence 33455666655445433211 1123578877654 455666666666654
No 332
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.45 E-value=5.8e-11 Score=128.90 Aligned_cols=233 Identities=13% Similarity=0.099 Sum_probs=140.7
Q ss_pred CCCchhHHHHHHHHHHHhCCC-----cEEEe-CCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc------
Q 009172 206 RYGNPTTVVVEEKMSALEGAE-----STVIM-ASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP------ 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~~-----~~i~~-sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~------ 271 (541)
.+.+|...+|.++|.++.... ..+++ +||++|+..+++.. .....+||.....|++.......+-.
T Consensus 102 ~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~ 181 (464)
T PRK06938 102 DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKK 181 (464)
T ss_pred ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccc
Confidence 457888888989998876532 34565 69999999998743 12346788888888884322111100
Q ss_pred cCC---cEEEEeCCC-----------------CHHHHHHhccC-----CCeeEEEEeCCCCCCCcccC----HHHHHHHH
Q 009172 272 KMG---ITATVIDPA-----------------DMEGLEAALNN-----NNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 272 ~~G---i~v~~vd~~-----------------dle~Le~ai~~-----~~tklV~lesp~NPtG~v~d----i~~Ia~la 322 (541)
.++ ..+.+++.. +++.+++.+.+ +++.+|++|......|.+.+ +++|.++|
T Consensus 182 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc 261 (464)
T PRK06938 182 PLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRIT 261 (464)
T ss_pred cCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 000 112233211 25667777752 14899999988876777665 78999999
Q ss_pred HhCCCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCC--CccHH
Q 009172 323 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPN 394 (541)
Q Consensus 323 ~~~gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~--~~s~~ 394 (541)
++||+++|.||++... +.......-.||++ ++|.++|+ ...|++++++++ +.+... .++. .-+|.
T Consensus 262 ~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gKglggG--~PlsAv~~~~~~-~~~~~~--~~~~T~~gnpl 334 (464)
T PRK06938 262 EEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVV--LSKAIGGS--LPLAVVVYREWL-DTWQPG--AHAGTFRGNQM 334 (464)
T ss_pred HHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEE--eeccccCC--CceEEEeehhHh-hccCCC--CCCCCCCcCHH
Confidence 9999999999995432 11222333468888 68999864 345666676664 433211 1222 23577
Q ss_pred HHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009172 395 AAYLIIRGMKTLHLR--VQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 395 ~a~l~l~~l~tl~~r--~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
.+.+++..|+.+... .++..+..+++.+.|++ +|.+.. .+|.|.|+.+++.
T Consensus 335 a~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~------------------VrG~Glm~gie~~ 391 (464)
T PRK06938 335 AMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGD------------------VRGRGLMLGVEIV 391 (464)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeee------------------eeccceEEEEEec
Confidence 777777777665421 12222333334343332 333322 2567889999985
No 333
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.44 E-value=2e-11 Score=132.63 Aligned_cols=235 Identities=14% Similarity=0.158 Sum_probs=142.7
Q ss_pred CCCchhHHHHHHHHHHHhCC-------CcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHHHHhhc
Q 009172 206 RYGNPTTVVVEEKMSALEGA-------ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVL 270 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~-------~~~i~~sSG~~Ai~~al~all~-------~-GD~VIv~~~~y~~~~~~~~~~l 270 (541)
.+.++...+|.++|+++... +.+++++||++|+..+++.... + ..+||.....|++.....-..-
T Consensus 103 ~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~ 182 (472)
T PRK08742 103 GFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVG 182 (472)
T ss_pred ccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhcc
Confidence 35678888999999998743 4678889999999999874321 2 3688988888888432111110
Q ss_pred c------cCC---cEEEEeCCC-----------------CHHHHHHhcc--CCCeeEEEEeC-CCCCCCcccC----HHH
Q 009172 271 P------KMG---ITATVIDPA-----------------DMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKL 317 (541)
Q Consensus 271 ~------~~G---i~v~~vd~~-----------------dle~Le~ai~--~~~tklV~les-p~NPtG~v~d----i~~ 317 (541)
. .++ ..+.+++.. +++.+++.+. .+++.+|++|. ..+..|.+.+ +++
T Consensus 183 ~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~ 262 (472)
T PRK08742 183 DIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRR 262 (472)
T ss_pred CCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHH
Confidence 0 000 012222211 2456666664 23589999998 4666676654 789
Q ss_pred HHHHHHhCCCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH----hhhc
Q 009172 318 VSDLCHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL----HHVL 387 (541)
Q Consensus 318 Ia~la~~~gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~----~~~~ 387 (541)
|.++|++||+++|.||++... +..+....-.||++ +.|.++|+- ...|.+++++++.+.+... ...+
T Consensus 263 lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~--~gKgl~gG~-~Plaav~~~~ei~~~~~~~~~~~~~~h 339 (472)
T PRK08742 263 ARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLC--LSKGLTGGF-LPLSAVLATQQLYDAFLDDSRERAFLH 339 (472)
T ss_pred HHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEE--EcccccCCC-CCcceeeccHHHHHHhhccCccCccCc
Confidence 999999999999999995421 11222333468887 689998642 1256677788887765421 0112
Q ss_pred CCC--ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-------hCCCceEEeCCCCCCCchhhhHhhhcCCcccEE
Q 009172 388 GGA--LNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILE-------AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVV 458 (541)
Q Consensus 388 g~~--~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~-------~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~v 458 (541)
+.+ -+|..+.+++..|+.+.. +...+++.++.++|. ++|.|.. .+|.|.|+
T Consensus 340 ~~T~~gnpl~~Aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~~~~~~~~~~i~d------------------vRG~Gl~~ 399 (472)
T PRK08742 340 SHSYTGNPLACAAALATLDIFAD--DDVIARNQPTAARMTQLAAQIGEHPHVAD------------------VRQAGMVV 399 (472)
T ss_pred CCCCCccHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHhcCCCeee------------------EeccceEE
Confidence 322 357777776666665532 122233333333332 2232222 35678899
Q ss_pred EEEEc
Q 009172 459 SFEVD 463 (541)
Q Consensus 459 sf~l~ 463 (541)
.|++.
T Consensus 400 giel~ 404 (472)
T PRK08742 400 AFELT 404 (472)
T ss_pred EEEec
Confidence 99995
No 334
>PRK07480 putative aminotransferase; Validated
Probab=99.44 E-value=3.8e-11 Score=130.09 Aligned_cols=240 Identities=15% Similarity=0.205 Sum_probs=145.0
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHhh------
Q 009172 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETV------ 269 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all~-------~G-D~VIv~~~~y~~~~~~~~~~------ 269 (541)
.+.++...+|.++|+++.+. +.+++++||++|+..+++.... +| .+||.....|++.......+
T Consensus 90 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~ 169 (456)
T PRK07480 90 KTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYM 169 (456)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhh
Confidence 45788899999999998853 5788899999999998864321 33 47888888888843111000
Q ss_pred cccCCc---EEEEeCCC---------C--------HHHHHHhcc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHH
Q 009172 270 LPKMGI---TATVIDPA---------D--------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 270 l~~~Gi---~v~~vd~~---------d--------le~Le~ai~---~~~tklV~lesp~NPtG~v~d----i~~Ia~la 322 (541)
-...+. .+..++.. + .+.+++.+. .+++.+|++|......|.+.+ +++|.++|
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc 249 (456)
T PRK07480 170 HEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRIC 249 (456)
T ss_pred hcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHH
Confidence 000111 12222210 1 255655442 235899999998877788776 88999999
Q ss_pred HhCCCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH-Hh-hhcC--CCcc
Q 009172 323 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-LH-HVLG--GALN 392 (541)
Q Consensus 323 ~~~gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~-~~-~~~g--~~~s 392 (541)
++||+++|+||++... +.......-.|+++ ++|.++++- ...|.+++++++.+.+.. .. ...+ ...+
T Consensus 250 ~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gn 326 (456)
T PRK07480 250 RKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT--IAKGLTSGY-IPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGH 326 (456)
T ss_pred HHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee--eehhhccCC-ccceEEEEcHHHHHHHhcCCCCcccCCCCCcC
Confidence 9999999999996421 11222233357776 799998641 124667778888776631 11 1122 2345
Q ss_pred HHHHHHHHHhHHHHHHH--HHHH-HHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009172 393 PNAAYLIIRGMKTLHLR--VQQQ-NSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 393 ~~~a~l~l~~l~tl~~r--~~~~-~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
|..+.+++..|+.+... .++. .+..+++.+.|++.. .+|.. .+.+|.|.|+.+++.
T Consensus 327 pl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l~-----~~~~i----------~~vrG~Glm~gie~~ 385 (456)
T PRK07480 327 PVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLRELA-----DHPLV----------GEVRGVGLVGAIELV 385 (456)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhh-----cCCCe----------eeEEeecceEEEEEe
Confidence 77777777777765431 2223 233445555554311 11210 123567889999984
No 335
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.44 E-value=3.9e-11 Score=130.31 Aligned_cols=215 Identities=16% Similarity=0.173 Sum_probs=139.3
Q ss_pred CchhHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhh----------cccCC
Q 009172 208 GNPTTVVVEEKMSALEG-AESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV----------LPKMG 274 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g-~~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~----------l~~~G 274 (541)
.++...+|.++|.+... .+.+.+++||++|+..+++.. ....++||.....|++....+... ....|
T Consensus 137 ~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g 216 (474)
T PLN02482 137 PCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPG 216 (474)
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCC
Confidence 56777788888888875 467888999999999998743 223468888888898854221100 00112
Q ss_pred c------EEEEeCCCCHHHHHHhccC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCC---C
Q 009172 275 I------TATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP---L 339 (541)
Q Consensus 275 i------~v~~vd~~dle~Le~ai~~--~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~---~ 339 (541)
+ .+..++.+|++++++.+.. +++.+|++|......|.+.| +++|.++|++||+++|+||++... .
T Consensus 217 ~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~ 296 (474)
T PLN02482 217 VPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAY 296 (474)
T ss_pred CCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCc
Confidence 1 2334556689999988853 25889999998888888877 568999999999999999996321 1
Q ss_pred --cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-hhcCCC--ccHHHHHHHHHhHHHHHH--HHHH
Q 009172 340 --NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGA--LNPNAAYLIIRGMKTLHL--RVQQ 412 (541)
Q Consensus 340 --~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~-~~~g~~--~s~~~a~l~l~~l~tl~~--r~~~ 412 (541)
.+.......|+++ ++|.++++ ...|.+++++++.+.+.... ..++++ .+|..+.+++..|+.+.. ..++
T Consensus 297 ~ga~~~~gv~PDi~t--~gK~lggG--~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~ 372 (474)
T PLN02482 297 GGAQEYFGITPDLTT--LGKVIGGG--LPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEY 372 (474)
T ss_pred chHhHHhCCCCCEEE--ecchhhCC--CceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHH
Confidence 1111223357764 79999864 23566688988888775311 122333 356666666666665532 3344
Q ss_pred HHHHHHHHHHHHHh
Q 009172 413 QNSTALRMAEILEA 426 (541)
Q Consensus 413 ~~~na~~la~~L~~ 426 (541)
..+..+++.+.|++
T Consensus 373 ~~~~g~~l~~~L~~ 386 (474)
T PLN02482 373 LDKITKKLIQGILE 386 (474)
T ss_pred HHHHHHHHHHHHHH
Confidence 44555556555554
No 336
>PRK06149 hypothetical protein; Provisional
Probab=99.43 E-value=8.1e-11 Score=138.41 Aligned_cols=288 Identities=14% Similarity=0.144 Sum_probs=176.0
Q ss_pred CCCCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhh-cc-----c-
Q 009172 204 YGRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV-LP-----K- 272 (541)
Q Consensus 204 Y~R~~~p~~~~Le~~LA~l~g--~~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~-l~-----~- 272 (541)
.+|+.++...+|.++|+++.. .+.+++++||++|+..+++.. .....+||+.+..|+|.......+ .. .
T Consensus 618 ~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~ 697 (972)
T PRK06149 618 NSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQA 697 (972)
T ss_pred cccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccc
Confidence 356777889999999999984 467899999999999998722 123457888888888633111000 00 0
Q ss_pred -----CCcEEEEeC--------CCC-----HHHHHHhcc-----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhC
Q 009172 273 -----MGITATVID--------PAD-----MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (541)
Q Consensus 273 -----~Gi~v~~vd--------~~d-----le~Le~ai~-----~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~ 325 (541)
.++.....+ ..+ .+++++.++ .+++.+|++|......|.+.+ +++|.++|++|
T Consensus 698 ~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~ 777 (972)
T PRK06149 698 LETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR 777 (972)
T ss_pred cCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc
Confidence 011111000 011 233333332 235889999998887888887 99999999999
Q ss_pred CCEEEEEcCCCC-CCcc------cccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhh-cCCCccHHHHH
Q 009172 326 GAIVCIDGTFAT-PLNQ------KALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHV-LGGALNPNAAY 397 (541)
Q Consensus 326 gillvvDea~a~-~~~~------~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~-~g~~~s~~~a~ 397 (541)
|+++|+||++.. +-.. .......||++ ++|.+|++ ...|++++++++.+.+...... .+...+|..+.
T Consensus 778 g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt--~gK~lg~G--~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~a 853 (972)
T PRK06149 778 GGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIIT--MAKGMGNG--HPLGAVITRREIAEALEAEGYFFSSTGGSPVSCR 853 (972)
T ss_pred CCEEEEEeehhcCCccCccchhhhhcCCCCCEEE--ecccccCC--eeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHH
Confidence 999999999632 1111 11223468874 89999864 3568888998888776531111 12235788888
Q ss_pred HHHHhHHHHHHHHHHHHHHH----HHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC-----
Q 009172 398 LIIRGMKTLHLRVQQQNSTA----LRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG----- 464 (541)
Q Consensus 398 l~l~~l~tl~~r~~~~~~na----~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g----- 464 (541)
+++..|+.+.. +...+++ +++.+.|++ +|.+. ..+|.|.|+.+++..
T Consensus 854 aala~L~~i~~--e~l~~~~~~~G~~l~~~L~~l~~~~~~i~------------------~vrG~Gl~~gvel~~~~~~~ 913 (972)
T PRK06149 854 IGMAVLDVLRE--EKLQENARRVGDHLKARLEALADRHPLIG------------------AVHGMGLYLGVELVRDRQTL 913 (972)
T ss_pred HHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeE------------------EEeecceEEEEEEecCcccC
Confidence 77777776542 1233444 444444443 23222 235688899999842
Q ss_pred --CHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEE----ecCCCHHHHHHHHHHHH
Q 009172 465 --DLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFS----FGVEDFEDLKADVLQAL 538 (541)
Q Consensus 465 --~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlS----vG~Ed~edli~dL~~AL 538 (541)
..+....+.+.+...|+-+...+ ...+.|||. +..++.+.+++.|+++|
T Consensus 914 ~~~~~~~~~i~~~l~~~Gvl~~~~g-------------------------~~~~vl~~~Ppl~it~~~id~~~~~l~~~l 968 (972)
T PRK06149 914 EPATEETAAICDRLLELGVIMQPTG-------------------------DHLNILKIKPPLCLDRESADFFVDMLDRVL 968 (972)
T ss_pred CCChHHHHHHHHHHHhCCeEEeecC-------------------------CCCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 12345566666655554443211 113456643 34467788888888887
Q ss_pred hh
Q 009172 539 HA 540 (541)
Q Consensus 539 ~~ 540 (541)
.+
T Consensus 969 ~~ 970 (972)
T PRK06149 969 TE 970 (972)
T ss_pred Hh
Confidence 64
No 337
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.43 E-value=4e-11 Score=128.98 Aligned_cols=215 Identities=12% Similarity=0.160 Sum_probs=139.1
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc--cCCCEEEEcCCCCcchHHH-HHh-hcc---------
Q 009172 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV--PAGGHIVTTTDCYRKTRIF-IET-VLP--------- 271 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all--~~GD~VIv~~~~y~~~~~~-~~~-~l~--------- 271 (541)
+.++...+|.++|.++.+. +.+.+++||++|+..+++... ....+|+.....|++.... +.. .+.
T Consensus 90 ~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~ 169 (433)
T PRK00615 90 LTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTH 169 (433)
T ss_pred CCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCC
Confidence 4677788899999988764 478888999999999987432 2235788888888884211 100 000
Q ss_pred cC-----CcEEEEeCCCCHHHHHHhccC--CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCC-C
Q 009172 272 KM-----GITATVIDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-L 339 (541)
Q Consensus 272 ~~-----Gi~v~~vd~~dle~Le~ai~~--~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~-~ 339 (541)
.. ......++..|++++++.+.. +++.+|++|......|.+.| +++|.++|++||+++|+||++... .
T Consensus 170 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~ 249 (433)
T PRK00615 170 LVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRV 249 (433)
T ss_pred CCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccc
Confidence 00 011222345678888888742 24789999998888888877 459999999999999999997422 1
Q ss_pred c----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-hcCCC--ccHHHHHHHHHhHHHHHH--HH
Q 009172 340 N----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGA--LNPNAAYLIIRGMKTLHL--RV 410 (541)
Q Consensus 340 ~----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~-~~g~~--~s~~~a~l~l~~l~tl~~--r~ 410 (541)
. ........|+++ ++|.++++ ..+|++++++++.+.+..... ..+.+ .+|..+.+++..|+.+.. ..
T Consensus 250 G~~ga~~~~gv~PDi~~--~gK~lggG--~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~ 325 (433)
T PRK00615 250 AQGGAAAIYHVKPDITV--YGKILGGG--LPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFY 325 (433)
T ss_pred cHhHHHHhcCCCCCeEE--EcccccCC--cceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHH
Confidence 1 111223467776 79999854 347888999998887753211 12222 467777777777766532 23
Q ss_pred HHHHHHHHHHHHHHH
Q 009172 411 QQQNSTALRMAEILE 425 (541)
Q Consensus 411 ~~~~~na~~la~~L~ 425 (541)
++..++.+++.+.|+
T Consensus 326 ~~~~~~g~~l~~~l~ 340 (433)
T PRK00615 326 TQLSTLEQNFLSPIE 340 (433)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444455544444
No 338
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.43 E-value=3.8e-11 Score=127.02 Aligned_cols=292 Identities=17% Similarity=0.172 Sum_probs=178.1
Q ss_pred CCCCCCchhHHHHHHHHHHHhC-C--CcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCCcchHH-------
Q 009172 203 EYGRYGNPTTVVVEEKMSALEG-A--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTRI------- 264 (541)
Q Consensus 203 ~Y~R~~~p~~~~Le~~LA~l~g-~--~~~i~~sSG~~Ai~~al~all-------~~G-D~VIv~~~~y~~~~~------- 264 (541)
.++-...| ..+|.++|+++.+ . +.++++.||++|++.++.-.+ +|. .++|.-...|++..-
T Consensus 81 ~~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g 159 (449)
T COG0161 81 FGGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGG 159 (449)
T ss_pred hcccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccC
Confidence 34444567 8999999999998 3 567888899999999886332 232 358888888887311
Q ss_pred ---HHHhhcccCCcEEEEeCC-----------C------CHHHHHHhccC---CCeeEEEEeCCCCC-CCcccC----HH
Q 009172 265 ---FIETVLPKMGITATVIDP-----------A------DMEGLEAALNN---NNVSLFFTESPTNP-FLRCVD----VK 316 (541)
Q Consensus 265 ---~~~~~l~~~Gi~v~~vd~-----------~------dle~Le~ai~~---~~tklV~lesp~NP-tG~v~d----i~ 316 (541)
.........-..+.+++. . ..++|++.|.. +++.++++|....- .|.+++ ++
T Consensus 160 ~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~ 239 (449)
T COG0161 160 PVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLK 239 (449)
T ss_pred chhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHH
Confidence 010111111111112211 1 14566666653 46899999998877 677765 88
Q ss_pred HHHHHHHhCCCEEEEEcCCCC----C--CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-h----h
Q 009172 317 LVSDLCHKKGAIVCIDGTFAT----P--LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-H----H 385 (541)
Q Consensus 317 ~Ia~la~~~gillvvDea~a~----~--~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~-~----~ 385 (541)
++.++|++||+++|.||+... + +.......-.||++ ++|.+.++--. .|.++.++++.+.+..- . +
T Consensus 240 ~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~--~aKGLT~GY~P-l~a~l~~~~I~~~~~~~~~~~f~H 316 (449)
T COG0161 240 RVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILC--LAKGLTGGYLP-LSAVLTSDRIYEAFSDGDAGAFMH 316 (449)
T ss_pred HHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeee--ecccccccchh-hHhHhhhHHHHHHHhcccCCeecc
Confidence 999999999999999999321 1 22222333458887 78999866533 44455667777776543 1 1
Q ss_pred hcCCCccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEE
Q 009172 386 VLGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVS 459 (541)
Q Consensus 386 ~~g~~~s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vs 459 (541)
.+.-+-+|..|.+++..|+-+.. .+++..+...++.+.|+. +|.|..| ++.|-|..
T Consensus 317 G~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdV------------------R~~Gli~~ 378 (449)
T COG0161 317 GHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDV------------------RGLGLIGA 378 (449)
T ss_pred CCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEe------------------eccceEEE
Confidence 22234578899888888876542 233444445555555543 3344443 45677888
Q ss_pred EEEcCCHH--------HHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHH
Q 009172 460 FEVDGDLT--------ATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLK 531 (541)
Q Consensus 460 f~l~g~~~--------~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli 531 (541)
+++..+.+ ...++.+.+...|+-+...+. .+...|+ +.+..|+.++++
T Consensus 379 iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g~-~i~~~PP-----------------------liit~~eid~l~ 434 (449)
T COG0161 379 IELVADKATKTPFEARVGARVRAAALERGLLIRPLGD-VIYLMPP-----------------------LIITREEIDELV 434 (449)
T ss_pred EEEecccccccchhhhHHHHHHHHHHHCCeEEeecCC-EEEEcCC-----------------------ccCCHHHHHHHH
Confidence 88864321 244555555445655553332 2333343 334447888899
Q ss_pred HHHHHHHhh
Q 009172 532 ADVLQALHA 540 (541)
Q Consensus 532 ~dL~~AL~~ 540 (541)
+.+.++|+.
T Consensus 435 ~~l~~al~~ 443 (449)
T COG0161 435 DALREALDE 443 (449)
T ss_pred HHHHHHHHH
Confidence 999888874
No 339
>PRK07036 hypothetical protein; Provisional
Probab=99.43 E-value=9.8e-11 Score=127.28 Aligned_cols=239 Identities=14% Similarity=0.170 Sum_probs=145.8
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc------c-C-CCEEEEcCCCCcchHHHHHhhccc----
Q 009172 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV------P-A-GGHIVTTTDCYRKTRIFIETVLPK---- 272 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all------~-~-GD~VIv~~~~y~~~~~~~~~~l~~---- 272 (541)
+.++...+|.++|+++... +.+++++||++|+..+++... . + ..+||.....|++.......+-..
T Consensus 92 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~ 171 (466)
T PRK07036 92 MTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADR 171 (466)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCccc
Confidence 5678888999999998753 567888999999999887431 1 2 257888888888843221111000
Q ss_pred --CC---cEEEEeCCCC-----------------HHHHHHhcc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009172 273 --MG---ITATVIDPAD-----------------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 273 --~G---i~v~~vd~~d-----------------le~Le~ai~---~~~tklV~lesp~NPtG~v~d----i~~Ia~la~ 323 (541)
++ ..+.+++..+ ++.+++.+. .+++.+|++|......|.+.| +++|.++|+
T Consensus 172 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~ 251 (466)
T PRK07036 172 TEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICR 251 (466)
T ss_pred ccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHH
Confidence 00 1122221110 234455552 235899999999877888777 889999999
Q ss_pred hCCCEEEEEcCCCCC-C-----ccc-ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH---h--hhcCC--
Q 009172 324 KKGAIVCIDGTFATP-L-----NQK-ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL---H--HVLGG-- 389 (541)
Q Consensus 324 ~~gillvvDea~a~~-~-----~~~-~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~---~--~~~g~-- 389 (541)
+||+++|+||++... - ... ....-.||++ ++|.++++- +..|.+++++++.+.+... . ...+.
T Consensus 252 ~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 328 (466)
T PRK07036 252 RYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIIT--FAKGLTSGY-QPLGAVIISERLLDVISGPNAKGNVFTHGFTY 328 (466)
T ss_pred HcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEE--EccccccCc-cccEEEEEcHHHHHHHhcccCcCcccccCCCC
Confidence 999999999996422 1 111 2233468776 789998641 1256777888888776531 0 11221
Q ss_pred CccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009172 390 ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 390 ~~s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
..+|..+.+++..|+.+.. ..++..+..+++.+.|+.. . .+|.. ...+|.|.|+.+++.
T Consensus 329 ~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l---~--~~~~v----------~~vrG~Gl~~~ve~~ 389 (466)
T PRK07036 329 SGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL---R--ELPLV----------GDVRGDHLMACVECV 389 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh---c--cCCCE----------EEEEeeceEEEEEEc
Confidence 2467777777777776642 2333344444555555431 1 12210 123578889999995
No 340
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.41 E-value=5.7e-11 Score=128.94 Aligned_cols=239 Identities=15% Similarity=0.146 Sum_probs=146.2
Q ss_pred CCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc-------cC-CCEEEEcCCCCcchHHHHHhhcc-----
Q 009172 207 YGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PA-GGHIVTTTDCYRKTRIFIETVLP----- 271 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all-------~~-GD~VIv~~~~y~~~~~~~~~~l~----- 271 (541)
+.++...+|.++|+++.+. +.+++++||++|+..+++... .+ ..+||.....|++.....-.+-.
T Consensus 96 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~ 175 (460)
T PRK06916 96 LANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFH 175 (460)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccc
Confidence 4677888999999998754 578888999999999887432 23 36889889889884322111100
Q ss_pred -cCC---cEEEEeCC-----------------CCHHHHHHhcc--CCCeeEEEEeC-CCCCCCcccC----HHHHHHHHH
Q 009172 272 -KMG---ITATVIDP-----------------ADMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 272 -~~G---i~v~~vd~-----------------~dle~Le~ai~--~~~tklV~les-p~NPtG~v~d----i~~Ia~la~ 323 (541)
.++ ..+..++. .+++.+++.++ .+++.+|++|. +....|.+.+ +++|.++|+
T Consensus 176 ~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~ 255 (460)
T PRK06916 176 QVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCT 255 (460)
T ss_pred cccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHH
Confidence 000 01111210 12456677764 23589999998 5766776654 789999999
Q ss_pred hCCCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-----hhhcCCC--
Q 009172 324 KKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGGA-- 390 (541)
Q Consensus 324 ~~gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~-----~~~~g~~-- 390 (541)
++|+++|+||++... +.......-.|+++ +.|.++++- +..|++++++++.+.+... ....+.+
T Consensus 256 ~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~--~gK~l~gG~-~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~ 332 (460)
T PRK06916 256 KYNVLFITDEVATGFGRTGKMFACEHENVTPDIMT--AGKGLTGGY-LPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYT 332 (460)
T ss_pred HcCCEEEeechhhCCCcCchhhHHHhcCCCCCeee--eehhhhcCc-cccceeeecHHHHHHhhccccccCccccCCCCC
Confidence 999999999995321 11222233468876 799998642 2357778888887765421 0112222
Q ss_pred ccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009172 391 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
.+|..+.+++..|+.+.. ..++..+..+++.+.|++.. + +|.+ ...+|.|.|+.+++.
T Consensus 333 gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~---~--~~~v----------~~vrG~Glm~giel~ 392 (460)
T PRK06916 333 GNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLF---A--LKHV----------GDIRQLGLMVGIELV 392 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhh---c--CCCe----------EEeecCCceeeEEee
Confidence 367777776667666532 23344444555555555421 1 1211 123567889999985
No 341
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.41 E-value=8.1e-11 Score=127.85 Aligned_cols=240 Identities=14% Similarity=0.174 Sum_probs=145.7
Q ss_pred CCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhc-------cC-CCEEEEcCCCCcchHHHHHhhcc----
Q 009172 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV-------PA-GGHIVTTTDCYRKTRIFIETVLP---- 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g--~~~~i~~sSG~~Ai~~al~all-------~~-GD~VIv~~~~y~~~~~~~~~~l~---- 271 (541)
.+.++...+|.++|+++.. .+.+++++||++|+..+++... .+ ..+||.....|++.......+-.
T Consensus 86 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 165 (466)
T PRK07030 86 GFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALF 165 (466)
T ss_pred ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccc
Confidence 4567888899999999874 3578888999999999987431 12 35788888888884321111100
Q ss_pred --cCC---cEEEEeCCC-----------------CHHHHHHhcc--CCCeeEEEEeC-CCCCCCcccC----HHHHHHHH
Q 009172 272 --KMG---ITATVIDPA-----------------DMEGLEAALN--NNNVSLFFTES-PTNPFLRCVD----VKLVSDLC 322 (541)
Q Consensus 272 --~~G---i~v~~vd~~-----------------dle~Le~ai~--~~~tklV~les-p~NPtG~v~d----i~~Ia~la 322 (541)
.++ ..+..++.. +++.+++.+. .+++.+|++|. +....|.+.+ +++|.++|
T Consensus 166 ~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc 245 (466)
T PRK07030 166 TETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREAC 245 (466)
T ss_pred cccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHH
Confidence 000 012222211 2456677774 23589999998 4666676654 77999999
Q ss_pred HhCCCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHH-----hhhcCCC-
Q 009172 323 HKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-----HHVLGGA- 390 (541)
Q Consensus 323 ~~~gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~-----~~~~g~~- 390 (541)
++||+++|.||++... +.......-.|+++ +.|.++|+- ...|.+++++++.+.+... ...++.+
T Consensus 246 ~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~-~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~ 322 (466)
T PRK07030 246 DRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLC--LSKALTGGY-LPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSY 322 (466)
T ss_pred HHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEe--eehhccCCc-ccceEEEecHHHHHHHhcccccccccccCCCC
Confidence 9999999999995421 11223334468888 689998641 2367788888887766421 0112222
Q ss_pred -ccHHHHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009172 391 -LNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 391 -~s~~~a~l~l~~l~tl~~r--~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
.+|..+.+++..|+.+... .++..+.-+++.+.|++.. .+|.+ .+.+|.|.|+.+++.
T Consensus 323 ~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-----~~~~v----------~~vrG~Gl~~gie~~ 383 (466)
T PRK07030 323 TGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLA-----DHPHV----------AEVRQTGMILAIEMV 383 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-----cCCCE----------EEeEeceeEEEEEec
Confidence 3677777777777665431 2233333344444444321 12211 123567889999985
No 342
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.41 E-value=4.9e-11 Score=128.65 Aligned_cols=227 Identities=21% Similarity=0.198 Sum_probs=151.0
Q ss_pred HHHHHHHHHhCC-C--cEEEeCCHHHHHHHHHHHhc-----cC---CC------EEEEcCCCCcchHHHHHhhcccCCcE
Q 009172 214 VVEEKMSALEGA-E--STVIMASGMSASTVMLLALV-----PA---GG------HIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 214 ~Le~~LA~l~g~-~--~~i~~sSG~~Ai~~al~all-----~~---GD------~VIv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
++-..++++++. + ...++++|++|+.+++++.- .. +. +|+++...|.+.... +..+|++
T Consensus 105 ~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Ka----a~~lG~~ 180 (460)
T COG0076 105 RVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKA----ARYLGLG 180 (460)
T ss_pred HHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHH----HHHhCCC
Confidence 344455667776 3 46888899999988776431 01 11 699998888876543 3444555
Q ss_pred EEEeC--C----CCHHHHHHhccCCCeeE--EEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc--ccc---
Q 009172 277 ATVID--P----ADMEGLEAALNNNNVSL--FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN--QKA--- 343 (541)
Q Consensus 277 v~~vd--~----~dle~Le~ai~~~~tkl--V~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~--~~~--- 343 (541)
++.++ . .|+++++++|+++ +.. |+....+-++|.+-|+++|+++|++++++++||.+++..+. .++
T Consensus 181 ~~~v~~~~~~~~id~~~l~~~i~~~-t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~ 259 (460)
T COG0076 181 LRRVPTVPTDYRIDVDALEEAIDEN-TIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR 259 (460)
T ss_pred ceeEEeccCccccCHHHHHHHHHhh-ccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccch
Confidence 44442 2 3899999999885 554 77778889999999999999999999999999999887543 111
Q ss_pred --c-ccCCcEEEECCccccCCCCCceEEEEEeC-hH-HHHHHHHHhhhcC-----------CCc--cHHHHHHHHHhH--
Q 009172 344 --L-SLGADLVLHSATKFIGGHNDVLAGSISGS-GK-LVTQIRNLHHVLG-----------GAL--NPNAAYLIIRGM-- 403 (541)
Q Consensus 344 --l-~~gaDivv~S~sK~lgg~g~v~gG~vv~~-~~-li~~l~~~~~~~g-----------~~~--s~~~a~l~l~~l-- 403 (541)
. -.++|-++.++||++.-+- .+|+++.+ ++ +.+.+.......+ ... ....+|..++.+
T Consensus 260 ~~f~l~~vdSIt~d~HK~g~aP~--~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~ 337 (460)
T COG0076 260 WDFGLEGVDSITVDGHKYGLAPI--GCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGR 337 (460)
T ss_pred hhcCCCCceEEEECcccccCCCC--CceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCH
Confidence 1 1268999999999987554 25665554 43 3333321111111 111 123455544433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009172 404 KTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 404 ~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g 464 (541)
+.+...+++..++++++++.|++.+..+-+.-|. .++|+|.+++
T Consensus 338 eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~-----------------l~~V~fr~~~ 381 (460)
T COG0076 338 EGYRKLLDRTLELARYLAEELEKLGDFELVNEPE-----------------LPIVAFRLKD 381 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCc-----------------cceEEEEcCC
Confidence 5566677788899999999999886555554453 3689999864
No 343
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.40 E-value=1.1e-10 Score=125.83 Aligned_cols=288 Identities=12% Similarity=0.120 Sum_probs=166.2
Q ss_pred CCCchhHHHHHHHHHHHh---CCCcEEEeCCHHHHHHHHHHHhcc--------C------CCEEEEcCCCCcchHHHHHh
Q 009172 206 RYGNPTTVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVP--------A------GGHIVTTTDCYRKTRIFIET 268 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~---g~~~~i~~sSG~~Ai~~al~all~--------~------GD~VIv~~~~y~~~~~~~~~ 268 (541)
.+.++...++-++|+++. +.+.+++++||++|+..+++.... . +.+||.....|++.....-.
T Consensus 81 ~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als 160 (431)
T TIGR03251 81 DVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLS 160 (431)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhh
Confidence 345677777888888875 235688899999999999874310 1 36899999888884322111
Q ss_pred hcc------cCC-------cEEEEe--C--------C-----CCHHHHHHhcc--CCCeeEEEEeCCCCCCCcccC----
Q 009172 269 VLP------KMG-------ITATVI--D--------P-----ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---- 314 (541)
Q Consensus 269 ~l~------~~G-------i~v~~v--d--------~-----~dle~Le~ai~--~~~tklV~lesp~NPtG~v~d---- 314 (541)
.-. .+. +...+. + . .+++++++.+. ++++.+|++|......|.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~ 240 (431)
T TIGR03251 161 LTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEF 240 (431)
T ss_pred ccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHH
Confidence 100 000 000000 0 0 12445555663 235899999998887887753
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeCh--HHHHHHHHHhhh
Q 009172 315 VKLVSDLCHKKGAIVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG--KLVTQIRNLHHV 386 (541)
Q Consensus 315 i~~Ia~la~~~gillvvDea~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~--~li~~l~~~~~~ 386 (541)
+++|.++|++||+++|+||++... . ..+......|+++ ++|.+. ++|++.+++ ++...+......
T Consensus 241 l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~--~gK~~~-----~~g~~~~~~i~~~~~~~~~~~~~ 313 (431)
T TIGR03251 241 LRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA--FGKKTQ-----VCGIMAGRRVDEVADNVFAVPSR 313 (431)
T ss_pred HHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEE--ecccCc-----cceEEecchHHHhhhhcccCccc
Confidence 889999999999999999997531 1 1122334578887 678762 356666543 222111110111
Q ss_pred cCC--CccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEE
Q 009172 387 LGG--ALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 462 (541)
Q Consensus 387 ~g~--~~s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l 462 (541)
.+. ..+|..+.++...++.+.. ..++..+..+++.+.|++... .+|.+. ...+|.|.|+.+++
T Consensus 314 ~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~i---------~~vrg~G~~~~i~~ 380 (431)
T TIGR03251 314 LNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAA----EFPHLV---------SNPRGRGLMCAFDL 380 (431)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----hCccce---------ecccccceeEEEEe
Confidence 122 2356666666666665432 123334444455444443100 112110 01245788999999
Q ss_pred cCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhhC
Q 009172 463 DGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 541 (541)
Q Consensus 463 ~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~~i 541 (541)
++ .+....+...+...++-+... ..+.|||+..+..+++.++.+.++|+++
T Consensus 381 ~~-~~~~~~~~~~l~~~Gvl~~~~---------------------------g~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 381 PS-TADRDEVIRQLYREGVLLLGC---------------------------GERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred CC-HHHHHHHHHHHHhCCeEEecC---------------------------CCCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 64 344556666665545433211 1256999999988888888888888753
No 344
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.39 E-value=4e-11 Score=134.00 Aligned_cols=173 Identities=13% Similarity=0.187 Sum_probs=127.7
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC----
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
.....+.++..|+++|++.+.++++|+ .++.+++++++.+||.|++++++|-+.+.. +-..|+..+++.+.
T Consensus 194 ~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~ha----Lilsga~PVYl~P~rn~~ 269 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHL----MMMSDVTPIYFRPTRNAY 269 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHH----HHHcCCeEEEeccccccc
Confidence 345778899999999999999999997 789999999999999999999999987653 34457777776432
Q ss_pred ------C-----HHHHHHhccCC-Cee---EEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc-------c
Q 009172 284 ------D-----MEGLEAALNNN-NVS---LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN-------Q 341 (541)
Q Consensus 284 ------d-----le~Le~ai~~~-~tk---lV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~-------~ 341 (541)
+ .+.++++|+.+ +.+ .+++.+|+ ..|.+.|++.|+++|+.++ +++||+|+.... .
T Consensus 270 Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~ 346 (714)
T PRK15400 270 GILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGK 346 (714)
T ss_pred CCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCc
Confidence 3 78888888643 133 67887774 6799999999999999887 689999775432 2
Q ss_pred cccccCC---c--EEEECCccccCCCCCceEEEEEeChHH-HHHHHHHhhhcCCC
Q 009172 342 KALSLGA---D--LVLHSATKFIGGHNDVLAGSISGSGKL-VTQIRNLHHVLGGA 390 (541)
Q Consensus 342 ~~l~~ga---D--ivv~S~sK~lgg~g~v~gG~vv~~~~l-i~~l~~~~~~~g~~ 390 (541)
.++..|+ | +++.|.||.+++.. .+.++-.+..+ .++++.....+.++
T Consensus 347 sam~~ga~~~~~i~vtQStHKtL~alT--QaS~LHvkg~vd~~~~n~a~~m~~ST 399 (714)
T PRK15400 347 CGMSGGRVEGKVIYETQSTHKLLAAFS--QASMIHVKGDVNEETFNEAYMMHTTT 399 (714)
T ss_pred ChhhcCCCCCCceEEEEchhhcccchh--HHhHHHHcCCCCHHHHHHHHHHHcCC
Confidence 2334566 5 99999999999765 34443332222 24555555555443
No 345
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.39 E-value=2e-11 Score=127.41 Aligned_cols=237 Identities=17% Similarity=0.212 Sum_probs=151.1
Q ss_pred CCCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhc-------c-CCCEEEEcCCCCcchHHH-H-------
Q 009172 205 GRYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALV-------P-AGGHIVTTTDCYRKTRIF-I------- 266 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g--~~~~i~~sSG~~Ai~~al~all-------~-~GD~VIv~~~~y~~~~~~-~------- 266 (541)
..+.++...+|.++|.++.+ .+.+++++||++|+..++.... . ...+|+.....|++.... +
T Consensus 54 ~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~ 133 (339)
T PF00202_consen 54 SGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPP 133 (339)
T ss_dssp TTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTH
T ss_pred cceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcc
Confidence 66788999999999999994 4678889999999999987443 2 346899999999873221 1
Q ss_pred -HhhcccCCcEEEEeCCCCHHH----------HHH---hccCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCE
Q 009172 267 -ETVLPKMGITATVIDPADMEG----------LEA---ALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAI 328 (541)
Q Consensus 267 -~~~l~~~Gi~v~~vd~~dle~----------Le~---ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gil 328 (541)
+.........+..++..++.. +++ ....+++.+|++|......|...+ +++|.++|++||++
T Consensus 134 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gil 213 (339)
T PF00202_consen 134 YRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGIL 213 (339)
T ss_dssp HHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-E
T ss_pred ccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccc
Confidence 111112222345566555544 222 222335899999998877776553 78999999999999
Q ss_pred EEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHh
Q 009172 329 VCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRG 402 (541)
Q Consensus 329 lvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~ 402 (541)
+|+||++... +.........|+++. +|.++++ ...|.+++++++.+.+...........+|..+.+++..
T Consensus 214 lI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~--gK~l~gG--~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~ 289 (339)
T PF00202_consen 214 LIADEVQTGFGRTGKFFASEHYGVDPDIVTF--GKGLGGG--LPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALAT 289 (339)
T ss_dssp EEEEETTTTTTTTSSSSGHHHHTSSSSEEEE--EGGGGTT--SSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHH
T ss_pred eecccccccccccCCccceecccccCccccc--ccchhhh--hhcccccccchhhccccccccccccccchHhhhhhhhH
Confidence 9999996532 222334455799885 5999976 45777888888776653322212222457777776666
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009172 403 MKTLHLR--VQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 403 l~tl~~r--~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
|+.+... .++..+...++.+.|++ ++.+..| +|.|.|+.|++.
T Consensus 290 l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rg~Gl~~~ie~~ 338 (339)
T PF00202_consen 290 LEILEEEDLLERVRELGERLREGLRELAARYPLIGEV------------------RGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEE------------------EEETTEEEEEES
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------eeeCeEEEEEEE
Confidence 6655432 33333444444444432 2444333 567889999885
No 346
>PRK07483 hypothetical protein; Provisional
Probab=99.38 E-value=1.4e-10 Score=125.28 Aligned_cols=294 Identities=15% Similarity=0.195 Sum_probs=170.4
Q ss_pred CCCchhHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHhcc-------CC-CEEEEcCCCCcchHHHHHhhc-----
Q 009172 206 RYGNPTTVVVEEKMSALEG--AESTVIMASGMSASTVMLLALVP-------AG-GHIVTTTDCYRKTRIFIETVL----- 270 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g--~~~~i~~sSG~~Ai~~al~all~-------~G-D~VIv~~~~y~~~~~~~~~~l----- 270 (541)
.+.++...+|.++|+++.. .+.+++++||++|+..+++.... +| .+||.....|++.....-.+-
T Consensus 69 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~ 148 (443)
T PRK07483 69 FFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWR 148 (443)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCccc
Confidence 3567888899999999874 36788899999999998874321 33 478888888888432111100
Q ss_pred -ccCC---cEEEEeCC----CC--------------HHHHHHhcc---CCCeeEEEEeCCCC-CCCcccC----HHHHHH
Q 009172 271 -PKMG---ITATVIDP----AD--------------MEGLEAALN---NNNVSLFFTESPTN-PFLRCVD----VKLVSD 320 (541)
Q Consensus 271 -~~~G---i~v~~vd~----~d--------------le~Le~ai~---~~~tklV~lesp~N-PtG~v~d----i~~Ia~ 320 (541)
..++ ..+..++. .+ ++++++++. .+++.+|++|.... ..|.+.+ +++|.+
T Consensus 149 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~ 228 (443)
T PRK07483 149 REPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIRE 228 (443)
T ss_pred ccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHH
Confidence 0011 11122221 11 256666553 23589999998874 3465554 889999
Q ss_pred HHHhCCCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh--hhcCCC--
Q 009172 321 LCHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH--HVLGGA-- 390 (541)
Q Consensus 321 la~~~gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~--~~~g~~-- 390 (541)
+|++||+++|+||++... +.......-.||++ ++|.++++- ...|++++++++.+.+.... ..++.+
T Consensus 229 lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG~-~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~ 305 (443)
T PRK07483 229 VCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVT--IAKGLGAGY-QPIGAVLASDRIYDAIADGSGFFQHGHTYL 305 (443)
T ss_pred HHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeee--ehhhhccCc-cccEEEEEcHHHHHHHhcCCCccccCCCCC
Confidence 999999999999995432 11222233468887 689998641 13577778888877665311 012222
Q ss_pred ccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009172 391 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 391 ~s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g 464 (541)
-+|..+.+++..++.+.. ..++..+..+++.+.|++ +|.+.. .+|.|.|+.+++..
T Consensus 306 gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vRG~Glm~gie~~~ 367 (443)
T PRK07483 306 GHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGD------------------IRGRGLFVGVELVA 367 (443)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeee------------------EeecccEEEEEEee
Confidence 357777776666665542 123333334444444433 222222 25678899999842
Q ss_pred CH----------HHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEe----cCCCHHHH
Q 009172 465 DL----------TATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSF----GVEDFEDL 530 (541)
Q Consensus 465 ~~----------~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSv----G~Ed~edl 530 (541)
+. .....+...+...++-+...+. .. .|...+.|||.- ..++.+..
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~--------~~------------~~~~~~~l~~~PpL~it~~eid~~ 427 (443)
T PRK07483 368 DRATKAPFDPALKLHARIKREAMARGLMVYPMGG--------TI------------DGVRGDHVLLAPPFIITAAQIDEI 427 (443)
T ss_pred cccccCCCCchhhHHHHHHHHHHHCCcEEEecCc--------cc------------cCCCCCEEEEECCCCCCHHHHHHH
Confidence 10 1234555555444433221100 00 011134677543 44677888
Q ss_pred HHHHHHHHhh
Q 009172 531 KADVLQALHA 540 (541)
Q Consensus 531 i~dL~~AL~~ 540 (541)
++.|+++|.+
T Consensus 428 ~~~l~~~l~~ 437 (443)
T PRK07483 428 VERLGDAIDA 437 (443)
T ss_pred HHHHHHHHHH
Confidence 8888888764
No 347
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.36 E-value=6.2e-10 Score=120.80 Aligned_cols=233 Identities=13% Similarity=0.111 Sum_probs=139.0
Q ss_pred CCCchhHHHHHHHHHHHhCCC----cEEEe-CCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcc-------
Q 009172 206 RYGNPTTVVVEEKMSALEGAE----STVIM-ASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLP------- 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~~----~~i~~-sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~------- 271 (541)
.+.++...+|.++|+++.+.. ..+++ +||++|+..+++.. ....++||.....|++.....-.+-.
T Consensus 97 ~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~ 176 (459)
T PRK06931 97 DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNA 176 (459)
T ss_pred ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccC
Confidence 356788889999999987532 24455 79999999998743 23346888888889885433211100
Q ss_pred --cCCcEEEEeCCC-------------CHHHH----HHhcc-----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009172 272 --KMGITATVIDPA-------------DMEGL----EAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 272 --~~Gi~v~~vd~~-------------dle~L----e~ai~-----~~~tklV~lesp~NPtG~v~d----i~~Ia~la~ 323 (541)
.....+.+++.. +.+.+ ++.+. ..++.+|++|......|.+.+ +++|.++|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~ 256 (459)
T PRK06931 177 VNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQ 256 (459)
T ss_pred CCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 001122333211 12222 33332 124899999998877777665 889999999
Q ss_pred hCCCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCC--CccHHH
Q 009172 324 KKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNA 395 (541)
Q Consensus 324 ~~gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~--~~s~~~ 395 (541)
+||+++|.||++... +.......-.|+++ ++|.++++ ...|++++++++ +.+... .++. .-+|..
T Consensus 257 ~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt--~gK~l~gG--~Pi~av~~~~~~-~~~~~~--~~~~T~~gnpla 329 (459)
T PRK06931 257 KHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV--MSKAVGGG--LPLAVLGIKKEF-DAWQPG--GHTGTFRGNQLA 329 (459)
T ss_pred HcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE--ecccccCC--cceeeeeeHHHH-hhccCC--CCCCCCCCCHHH
Confidence 999999999995432 11222333468887 78999875 345666666553 443221 1222 245777
Q ss_pred HHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009172 396 AYLIIRGMKTLHLR--VQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 396 a~l~l~~l~tl~~r--~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
+.+++..|+.+... .++..+..+++.+.|++ +|.+.. .+|.|.|+.+++.
T Consensus 330 ~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~------------------vrG~Glm~giel~ 385 (459)
T PRK06931 330 MATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGN------------------VRGRGLMIGIEIV 385 (459)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEe------------------EecCceEEEEEEc
Confidence 77777777665321 22223333444444432 333322 2567889999985
No 348
>PRK06917 hypothetical protein; Provisional
Probab=99.35 E-value=1.3e-09 Score=117.97 Aligned_cols=294 Identities=13% Similarity=0.144 Sum_probs=171.6
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc-------cCC-CEEEEcCCCCcchHHHHHhhcc----
Q 009172 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALV-------PAG-GHIVTTTDCYRKTRIFIETVLP---- 271 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all-------~~G-D~VIv~~~~y~~~~~~~~~~l~---- 271 (541)
.+.++...+|.++|+++... +.+++++||++|+..+++... .+| .+|+.....|++.....-....
T Consensus 70 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~ 149 (447)
T PRK06917 70 QFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLR 149 (447)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccc
Confidence 46778888999999998864 457788999999999987441 133 6788888888884322211110
Q ss_pred --cC-----CcEEEEeC--------C-------CCHHHHHHhccC---CCeeEEEEeCCCC-CCCcccC----HHHHHHH
Q 009172 272 --KM-----GITATVID--------P-------ADMEGLEAALNN---NNVSLFFTESPTN-PFLRCVD----VKLVSDL 321 (541)
Q Consensus 272 --~~-----Gi~v~~vd--------~-------~dle~Le~ai~~---~~tklV~lesp~N-PtG~v~d----i~~Ia~l 321 (541)
.+ ++.....+ . .+++.++++++. +++.+|++|.... ..|.+.+ +++|.++
T Consensus 150 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~l 229 (447)
T PRK06917 150 RQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEI 229 (447)
T ss_pred cccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHH
Confidence 00 11110000 0 124566776642 2589999998764 3455554 7799999
Q ss_pred HHhCCCEEEEEcCCCCC------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh--hcCC--Cc
Q 009172 322 CHKKGAIVCIDGTFATP------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH--VLGG--AL 391 (541)
Q Consensus 322 a~~~gillvvDea~a~~------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~--~~g~--~~ 391 (541)
|++||+++|+||++... +.......-.|+++ ++|.++++- ...|++++++++.+.+..... ..+. ..
T Consensus 230 c~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~--~gK~l~~G~-~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~g 306 (447)
T PRK06917 230 CDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMT--LGKGLGAGY-TPIAATVVSDRVMEPILRGSRSIMSGHTLSA 306 (447)
T ss_pred HHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEE--eeehhccCC-cceEEEEEcHHHHHHHhccCcccccccCCCC
Confidence 99999999999996431 11122233468776 799998641 135777788888776653211 1222 24
Q ss_pred cHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC
Q 009172 392 NPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD 465 (541)
Q Consensus 392 s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~ 465 (541)
+|..+.+++..++.+.. ..++..+..+++.+.|++ +|.+.. .+|.|.|+.+++..+
T Consensus 307 npl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrG~Gl~~~ie~~~~ 368 (447)
T PRK06917 307 NPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGD------------------VRGKGLLIGVEFVAD 368 (447)
T ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEEE------------------EeecceEEEEEEecc
Confidence 67777777777766542 233444444555555543 222222 256788999998421
Q ss_pred ----------HHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEec----CCCHHHHH
Q 009172 466 ----------LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLK 531 (541)
Q Consensus 466 ----------~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG----~Ed~edli 531 (541)
.+....+...+...|+-+...+.. + .|...+.|||+.- .++.+.++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~-----~---------------~g~~~~~i~l~Ppl~it~~eid~~~ 428 (447)
T PRK06917 369 KKTKQPFSKSQAVASELISVAAKNGLLLYPAVAG-----Q---------------DGKEGDAVIIAPPMTITYSELDELL 428 (447)
T ss_pred CCcCCCCcchhHHHHHHHHHHHhCCcEEEecccc-----c---------------CCCCCCEEEEECCCcCCHHHHHHHH
Confidence 123455655554444332211000 0 0112357888754 35666777
Q ss_pred HHHHHHHhh
Q 009172 532 ADVLQALHA 540 (541)
Q Consensus 532 ~dL~~AL~~ 540 (541)
+.|+++|++
T Consensus 429 ~~l~~~l~~ 437 (447)
T PRK06917 429 SIFAKSVEE 437 (447)
T ss_pred HHHHHHHHH
Confidence 777777653
No 349
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.34 E-value=6.6e-11 Score=132.25 Aligned_cols=172 Identities=13% Similarity=0.150 Sum_probs=127.6
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC----
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---- 283 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---- 283 (541)
.-...+.++..|+++|++...++.+|+ .++.+++++++++||.|++++++|-+.+.. +-..|+..+++.+.
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~a----Lilsga~PVYl~P~~n~~ 269 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHL----LMMSDVVPIWLKPTRNAL 269 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHH----HHHcCCeeEEeccccccc
Confidence 345778899999999999999999997 789999999999999999999999987653 33457777777532
Q ss_pred ------C-----HHHHHHhccCC----CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEE-EEEcCCCCCCccc-----
Q 009172 284 ------D-----MEGLEAALNNN----NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIV-CIDGTFATPLNQK----- 342 (541)
Q Consensus 284 ------d-----le~Le~ai~~~----~tklV~lesp~NPtG~v~di~~Ia~la~~~gill-vvDea~a~~~~~~----- 342 (541)
+ .+.++++|+++ +++++++.+|+ ..|.+.|+++|+++| |+.+ ++||+|+....+.
T Consensus 270 Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~ 345 (713)
T PRK15399 270 GILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQG 345 (713)
T ss_pred CCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCC
Confidence 2 38888888643 23688887775 779999999999998 6666 6999977543222
Q ss_pred --cccc--CCcEE---EECCccccCCCCCceEEEEEeChHHH-HHHHHHhhhcCCC
Q 009172 343 --ALSL--GADLV---LHSATKFIGGHNDVLAGSISGSGKLV-TQIRNLHHVLGGA 390 (541)
Q Consensus 343 --~l~~--gaDiv---v~S~sK~lgg~g~v~gG~vv~~~~li-~~l~~~~~~~g~~ 390 (541)
++.. |+|.+ +.|.||.+++.. .+.++-.+..+- ++++.....+.++
T Consensus 346 ~sam~~~~~aD~~i~~tQStHKtL~alT--QaS~iHvk~~vd~~~~n~a~~m~~ST 399 (713)
T PRK15399 346 KSGMSGERVPGKVIFETQSTHKMLAAFS--QASLIHIKGEYDEETFNEAFMMHTST 399 (713)
T ss_pred cChhhCCCCCCeeeeeeeehhccccccc--hheeeeecCCCCHHHHHHHHHHHcCC
Confidence 2222 57877 999999999876 456665544322 4555555555443
No 350
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.34 E-value=1.8e-10 Score=113.63 Aligned_cols=295 Identities=16% Similarity=0.148 Sum_probs=162.8
Q ss_pred hhHHHHHHHHHHHhCC---CcEEEeCCHH-HHHHHHHHHhc---cCCC--EEEEc-CCCCcchHHHH--HhhcccCCcEE
Q 009172 210 PTTVVVEEKMSALEGA---ESTVIMASGM-SASTVMLLALV---PAGG--HIVTT-TDCYRKTRIFI--ETVLPKMGITA 277 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~---~~~i~~sSG~-~Ai~~al~all---~~GD--~VIv~-~~~y~~~~~~~--~~~l~~~Gi~v 277 (541)
+..+.|.+.+.+.+|. ++.|..|+|+ .+.+.++..+. ..|+ .|+.+ .|+|-++-... .+.+-...-++
T Consensus 78 ~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~i 157 (417)
T COG3977 78 VLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNI 157 (417)
T ss_pred HHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCc
Confidence 3455555556666675 4688899998 56666665553 2343 45444 56676532110 01111111111
Q ss_pred EEeC------CCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCccc------
Q 009172 278 TVID------PADMEGLEAALNNNNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQK------ 342 (541)
Q Consensus 278 ~~vd------~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~------ 342 (541)
..++ ..|.+++. +.+ .+.+|++.-|+||||.+.. +.+|.++|++||+++++|++|+.|++.-
T Consensus 158 el~~~g~FKY~vDF~~l~--i~e-~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~ 234 (417)
T COG3977 158 ELLPAGQFKYHVDFEHLH--IGE-STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDAT 234 (417)
T ss_pred ccccccceeeccCHHHcc--ccc-ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccccc
Confidence 1111 12556554 334 5899999999999999975 5577778999999999999999876521
Q ss_pred ccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcC---CCccHHHHH-HHHHh-HHHHHHH-HHHHH-H
Q 009172 343 ALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLG---GALNPNAAY-LIIRG-MKTLHLR-VQQQN-S 415 (541)
Q Consensus 343 ~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g---~~~s~~~a~-l~l~~-l~tl~~r-~~~~~-~ 415 (541)
++=...-+.|.|+||.--++ ...|++++++++++.+..+..... +.+++..+. ++.++ |..+... ++-.. .
T Consensus 235 ~~w~~NiilC~SLSK~GLPG--~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~ 312 (417)
T COG3977 235 PLWNENIILCMSLSKLGLPG--SRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRN 312 (417)
T ss_pred ccCCCCEEEEeehhhcCCCC--cceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHH
Confidence 11112347899999975443 368999999999988876554322 233332222 22111 1122211 11111 2
Q ss_pred HHHHHHHHHHh-CCCceEEeCCCCCCCchhhhHhhhcCCcccE-EEEEEcCCHHHHHHHHHHcCCCceeecCCCccccee
Q 009172 416 TALRMAEILEA-HPKVKRVHYPGLKSHPEHHIATQQMTGFGGV-VSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVD 493 (541)
Q Consensus 416 na~~la~~L~~-~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~-vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~ 493 (541)
.++...+.|+. .|......+ ++.|.+ +|+-+++-+.....+.++||..|+-+-.|..+-.-.
T Consensus 313 ~~q~~~~~l~~~lp~~~~~iH----------------kpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl 376 (417)
T COG3977 313 RVQTTIAILRRYLPEYRCLIH----------------KPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGL 376 (417)
T ss_pred HHHHHHHHHHHhcCccceeee----------------cCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCC
Confidence 22333334433 232211111 123444 345454433456778888998888888887653211
Q ss_pred cCcccccccCCHHHHHhcCCCCCeEEEEecCCC--HHHHHHHHHHHHh
Q 009172 494 QPAIMSYWDLSQSERLKYGIMDNLVRFSFGVED--FEDLKADVLQALH 539 (541)
Q Consensus 494 ~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed--~edli~dL~~AL~ 539 (541)
- +.+.-....+|+|+--++ ++.-+..|.+.++
T Consensus 377 ----~----------~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~ve 410 (417)
T COG3977 377 ----D----------KEWPHTHQCMRMNYVPEPEKIEKGVAILAEEVE 410 (417)
T ss_pred ----C----------CCCCCccceEEEecCCCHHHHHHHHHHHHHHHH
Confidence 0 111223578999987543 4444555554444
No 351
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.33 E-value=7.1e-10 Score=119.37 Aligned_cols=257 Identities=12% Similarity=0.097 Sum_probs=154.5
Q ss_pred CCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcc-------C-CCEEEEcCCCCcchHHHHHhhccc---
Q 009172 206 RYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLALVP-------A-GGHIVTTTDCYRKTRIFIETVLPK--- 272 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~all~-------~-GD~VIv~~~~y~~~~~~~~~~l~~--- 272 (541)
.+.++...++.++|+++.+. +.+++++||++|+..++..... + ..+||.....|++.......+...
T Consensus 84 ~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~ 163 (427)
T TIGR00508 84 GFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENS 163 (427)
T ss_pred ccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccc
Confidence 34667788899999998754 5788889999999988874321 2 267999898888853222111010
Q ss_pred ----CC--c-EEEEeC-----------CCCHHHHHHhccC--CCeeEEEEeCC-CCCCCccc----CHHHHHHHHHhCCC
Q 009172 273 ----MG--I-TATVID-----------PADMEGLEAALNN--NNVSLFFTESP-TNPFLRCV----DVKLVSDLCHKKGA 327 (541)
Q Consensus 273 ----~G--i-~v~~vd-----------~~dle~Le~ai~~--~~tklV~lesp-~NPtG~v~----di~~Ia~la~~~gi 327 (541)
++ . .+..++ ..|++++++.+.. +++.+|++|.. .+..|.+. .+++|.++|++||+
T Consensus 164 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~ 243 (427)
T TIGR00508 164 MHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDI 243 (427)
T ss_pred ccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCC
Confidence 00 0 011111 1145667777642 25889999986 55555433 38899999999999
Q ss_pred EEEEEcCCCCC-C-----cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh---hcC--CCccHHHH
Q 009172 328 IVCIDGTFATP-L-----NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH---VLG--GALNPNAA 396 (541)
Q Consensus 328 llvvDea~a~~-~-----~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~---~~g--~~~s~~~a 396 (541)
++|+||++... . .........|+++ ++|.++|+ -...+.+++++++.+.+..... .++ ...+|..+
T Consensus 244 llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~gG-~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~ 320 (427)
T TIGR00508 244 LLIADEIATGFGRTGKLFACEHAGVVPDILC--VGKALTGG-YMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLAC 320 (427)
T ss_pred EEEEeccccCCCcCCccchhhhcCCCCCEEE--echhhhcC-cccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHH
Confidence 99999996321 1 1112233467776 79999643 2236778888888887764210 111 12357777
Q ss_pred HHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHH
Q 009172 397 YLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 474 (541)
Q Consensus 397 ~l~l~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~ 474 (541)
..++..++.+.. ..++..+...++.+.|++... +|.+ ...+|.|.|+.|++... .....+.+
T Consensus 321 aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~i----------~~vrg~G~~~~i~~~~~-~~~~~~~~ 384 (427)
T TIGR00508 321 AVAEASLAILLEGEWQKQVSAIENQLKRELSPLRK-----NPVV----------KDVRVLGAIGVVEMYKP-VNVEELQK 384 (427)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-----CCCE----------EeEeccccEEEEEECCc-cCHHHHHH
Confidence 666666665432 234455566666666665311 1211 11256788999999632 23445555
Q ss_pred HcCCCce
Q 009172 475 ALKIPYI 481 (541)
Q Consensus 475 ~L~~~~i 481 (541)
.+...|+
T Consensus 385 ~l~~~Gv 391 (427)
T TIGR00508 385 KFVEQGV 391 (427)
T ss_pred HHHHCCe
Confidence 5544443
No 352
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.33 E-value=2.7e-10 Score=123.09 Aligned_cols=286 Identities=13% Similarity=0.141 Sum_probs=162.4
Q ss_pred CCCchhHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHhc--------cC------CCEEEEcCCCCcchHHHHHh
Q 009172 206 RYGNPTTVVVEEKMSALEG---AESTVIMASGMSASTVMLLALV--------PA------GGHIVTTTDCYRKTRIFIET 268 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g---~~~~i~~sSG~~Ai~~al~all--------~~------GD~VIv~~~~y~~~~~~~~~ 268 (541)
.+.++...+|.++|+++.+ .+.+++++||++|+..+++... .. ..+||.....|++.....-.
T Consensus 88 ~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als 167 (443)
T PRK08297 88 DVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLS 167 (443)
T ss_pred CcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhh
Confidence 3556777888889988862 3578899999999999987441 01 25799999998885322111
Q ss_pred hcc-----c--CC------cEEEEe--C--C-----------CCHHHHHHhcc--CCCeeEEEEeCCCCCCCcccC----
Q 009172 269 VLP-----K--MG------ITATVI--D--P-----------ADMEGLEAALN--NNNVSLFFTESPTNPFLRCVD---- 314 (541)
Q Consensus 269 ~l~-----~--~G------i~v~~v--d--~-----------~dle~Le~ai~--~~~tklV~lesp~NPtG~v~d---- 314 (541)
.-. . +. +....+ + . .+++++++.+. ++++.+|++|......|.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~y 247 (443)
T PRK08297 168 LTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEF 247 (443)
T ss_pred hcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHH
Confidence 100 0 00 000001 0 0 02345566664 235899999988877777643
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCCC-Cc-----ccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH-H--hh
Q 009172 315 VKLVSDLCHKKGAIVCIDGTFATP-LN-----QKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN-L--HH 385 (541)
Q Consensus 315 i~~Ia~la~~~gillvvDea~a~~-~~-----~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~-~--~~ 385 (541)
+++|.++|++||+++|.||++... .. ......-.|+++ ++|.++ ++|++.+++ +.+.... + ..
T Consensus 248 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~-----~~a~l~~~~-i~~~~~~~~~~~~ 319 (443)
T PRK08297 248 FAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA--FGKKTQ-----VCGIMAGRR-VDEVEDNVFAVSS 319 (443)
T ss_pred HHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEE--eccccc-----ccceecchH-HHHhhhhhccCcc
Confidence 889999999999999999996532 11 112233468886 789884 356665543 2221111 1 01
Q ss_pred hcCCC--ccHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEE
Q 009172 386 VLGGA--LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE 461 (541)
Q Consensus 386 ~~g~~--~s~~~a~l~l~~l~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~ 461 (541)
..+++ .+|..+.+++..++.+.. ..++..+..+++.+.|++... .+|.+ ....+|.|.|+.|+
T Consensus 320 ~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~---------~~~vrg~G~~~~i~ 386 (443)
T PRK08297 320 RINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAA----EFPAV---------VSNVRGRGLMCAFD 386 (443)
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----HCCCc---------ceeeeccceEEEEE
Confidence 12222 466776666666665532 233444444555554443210 01111 01224578899999
Q ss_pred EcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHH
Q 009172 462 VDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQA 537 (541)
Q Consensus 462 l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~A 537 (541)
+.+ .+....+...+...|+-+..+ ..+.+||+..+ ++.+.+++.|+++
T Consensus 387 ~~~-~~~~~~~~~~l~~~Gvl~~~~---------------------------~~~~lr~~P~l~~t~~eid~~l~~l~~~ 438 (443)
T PRK08297 387 LPT-TADRDEVIRRLWEEGVLVLPC---------------------------GERSIRFRPALTVTTEEIDAAIDALRRA 438 (443)
T ss_pred ecC-HHHHHHHHHHHHHCCEEEecC---------------------------CCCeEEEECCccCCHHHHHHHHHHHHHH
Confidence 964 344556666665445433211 12457776554 4556666666666
Q ss_pred Hhh
Q 009172 538 LHA 540 (541)
Q Consensus 538 L~~ 540 (541)
|.+
T Consensus 439 l~~ 441 (443)
T PRK08297 439 LPE 441 (443)
T ss_pred HHh
Confidence 654
No 353
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.33 E-value=5e-11 Score=123.50 Aligned_cols=187 Identities=22% Similarity=0.319 Sum_probs=134.5
Q ss_pred HHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCC-Cc-chHHHHHhhcccCCcEEEEeCC---CCHHHH
Q 009172 214 VVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDC-YR-KTRIFIETVLPKMGITATVIDP---ADMEGL 288 (541)
Q Consensus 214 ~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~-y~-~~~~~~~~~l~~~Gi~v~~vd~---~dle~L 288 (541)
.+.+.++.+.|++++.++++-+.|+.+++.++.+ +.+||++.-. -. +.. -+...++..|.++..+.. ....++
T Consensus 72 ~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~-~~EvVis~g~lV~gg~~-~v~d~~~~aG~~l~EvG~tn~t~~~d~ 149 (395)
T COG1921 72 ELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAE-GKEVVVSRGELVEGGAF-RVPDIIRLAGAKLVEVGTTNRTHLKDY 149 (395)
T ss_pred HHHHHHhcccchhheeeECCcHHHHHHHHhhhcc-CCeEEEEccccccCCCC-ChhHHHHHcCCEEEEecccCcCCHHHH
Confidence 5666777777888999999999999999988877 4555554321 11 111 133556667888877754 368899
Q ss_pred HHhccCCCeeEEEEeCCCCC-CCcccCHHHHHHHHHhCCCEEEEEcCCCCC-----CcccccccCCcEEEECCccccCCC
Q 009172 289 EAALNNNNVSLFFTESPTNP-FLRCVDVKLVSDLCHKKGAIVCIDGTFATP-----LNQKALSLGADLVLHSATKFIGGH 362 (541)
Q Consensus 289 e~ai~~~~tklV~lesp~NP-tG~v~di~~Ia~la~~~gillvvDea~a~~-----~~~~~l~~gaDivv~S~sK~lgg~ 362 (541)
+.+|.++ |++++=.+-+|- .-...+.++++++||++|+++++|.+-+.. -.+..+..|+|+|++|..|.++|+
T Consensus 150 ~~AIne~-ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGP 228 (395)
T COG1921 150 ELAINEN-TALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGP 228 (395)
T ss_pred HHHhccC-CeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCC
Confidence 9999985 776654444443 223467889999999999999999986443 234456889999999999999998
Q ss_pred CCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHH
Q 009172 363 NDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTL 406 (541)
Q Consensus 363 g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl 406 (541)
. +|+++|++++++++++..-..+...+......+.+.|+.+
T Consensus 229 q---aGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe~y 269 (395)
T COG1921 229 Q---AGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALELY 269 (395)
T ss_pred c---cceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHHHH
Confidence 5 8999999999999987655555555554444444555543
No 354
>PRK06148 hypothetical protein; Provisional
Probab=99.32 E-value=1.1e-09 Score=129.05 Aligned_cols=288 Identities=15% Similarity=0.123 Sum_probs=174.1
Q ss_pred CCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhh-----cccCC-
Q 009172 205 GRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETV-----LPKMG- 274 (541)
Q Consensus 205 ~R~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~-----l~~~G- 274 (541)
+++.+|...+|.++|+++... +.+++++||++|+.++++.. .....+||+....|++.......+ -...+
T Consensus 658 ~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~ 737 (1013)
T PRK06148 658 TRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGK 737 (1013)
T ss_pred CCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCC
Confidence 467889999999999998864 56788999999999998743 223467888888888843211000 00011
Q ss_pred ---cEEEEe--------CCC--C-------HHHHHHhcc-----CCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhC
Q 009172 275 ---ITATVI--------DPA--D-------MEGLEAALN-----NNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKK 325 (541)
Q Consensus 275 ---i~v~~v--------d~~--d-------le~Le~ai~-----~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~ 325 (541)
..+..+ +.. + .+.+++.++ .+++.+|++|......|.+.+ +++|.++|+++
T Consensus 738 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~ 817 (1013)
T PRK06148 738 GRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA 817 (1013)
T ss_pred CCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh
Confidence 011111 111 1 134554442 135899999998877787776 88999999999
Q ss_pred CCEEEEEcCCCCC-------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCC--CccHHHH
Q 009172 326 GAIVCIDGTFATP-------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGG--ALNPNAA 396 (541)
Q Consensus 326 gillvvDea~a~~-------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~--~~s~~~a 396 (541)
|+++|.||++... +.+.....-.||++ +.|.++++ ...|++++++++.+.+.... .+++ .-+|..+
T Consensus 818 g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt--~gK~lggG--~Plgav~~~~ei~~~~~~g~-~~~~Tf~gnpla~ 892 (1013)
T PRK06148 818 GGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVT--MGKPIGNG--HPMGAVVTTREIADSFDNGM-EYFNTFGGNPVSC 892 (1013)
T ss_pred CCEEEEEecccCCCCCCCcchhhhhcCCCcceee--ecccccCC--cceEEEEEcHHHHhhccCCC-ccccCCCCCHHHH
Confidence 9999999996421 11222233467876 79999865 34677888888877664311 1222 2367777
Q ss_pred HHHHHhHHHHHHH--HHHHHHHHHHHHHHHHh----CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-----
Q 009172 397 YLIIRGMKTLHLR--VQQQNSTALRMAEILEA----HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD----- 465 (541)
Q Consensus 397 ~l~l~~l~tl~~r--~~~~~~na~~la~~L~~----~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~----- 465 (541)
.+++..|+.+... .++..+..+++.+.|++ +|.+.. .+|.|.|+.+++..+
T Consensus 893 aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~------------------VrG~Gl~~gvel~~~~~~~~ 954 (1013)
T PRK06148 893 AIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGD------------------VRGMGLFLGIELVTDRKTKA 954 (1013)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceE------------------EeeeceEEEEEecCCccccC
Confidence 7777777665421 22233333444444433 232222 356788999998532
Q ss_pred --HHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 009172 466 --LTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGV----EDFEDLKADVLQALH 539 (541)
Q Consensus 466 --~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~----Ed~edli~dL~~AL~ 539 (541)
.+....+++.+...|+-+...+ ...+.|||..-+ ++.+.+++.|+++|.
T Consensus 955 ~~~~~~~~i~~~~~~~Gvl~~~~g-------------------------~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~ 1009 (1013)
T PRK06148 955 PATAIARYVKNGARERGILIGTEG-------------------------PHDNVLKIRPPLIFSRADADHLLEVLDDVLA 1009 (1013)
T ss_pred ccHHHHHHHHHHHHhCCeEEeccC-------------------------CCCCEEEEeCCccCCHHHHHHHHHHHHHHHH
Confidence 1234566666655554443211 123566766554 556677777777775
Q ss_pred h
Q 009172 540 A 540 (541)
Q Consensus 540 ~ 540 (541)
+
T Consensus 1010 ~ 1010 (1013)
T PRK06148 1010 A 1010 (1013)
T ss_pred H
Confidence 4
No 355
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.30 E-value=2.5e-09 Score=109.74 Aligned_cols=284 Identities=15% Similarity=0.136 Sum_probs=147.3
Q ss_pred hhHHHHHHHHHHHhCC--CcEEEeCCHH-HHHHHHHH-----Hhcc--------CCCEEEEcCCCCcchHHHHHhhcccC
Q 009172 210 PTTVVVEEKMSALEGA--ESTVIMASGM-SASTVMLL-----ALVP--------AGGHIVTTTDCYRKTRIFIETVLPKM 273 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~--~~~i~~sSG~-~Ai~~al~-----all~--------~GD~VIv~~~~y~~~~~~~~~~l~~~ 273 (541)
....++|+.+|+++|. ++.|+..+.+ .-+.-++. .+.. +.=+.|++-|.|...+ .+.+.+
T Consensus 69 ~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHF----ai~E~~ 144 (425)
T PF12897_consen 69 DGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHF----AITEHF 144 (425)
T ss_dssp S--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHH----HHHHHC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHH----HHHHhh
Confidence 3577999999999997 4566665554 33322221 1211 1236899999997655 456778
Q ss_pred CcEEEEeCC----CCHHHHHHhcc-CCCeeEEEEeCC--CCCCCcccCHHHHHHHHH----hCCCEEEEEcCCCCCCcc-
Q 009172 274 GITATVIDP----ADMEGLEAALN-NNNVSLFFTESP--TNPFLRCVDVKLVSDLCH----KKGAIVCIDGTFATPLNQ- 341 (541)
Q Consensus 274 Gi~v~~vd~----~dle~Le~ai~-~~~tklV~lesp--~NPtG~v~di~~Ia~la~----~~gillvvDea~a~~~~~- 341 (541)
|++.+.|+. .|.|.+|+++. +..+|.||+ .| +||||.++.-+.+.++|. ..+..++.||+|+.....
T Consensus 145 Giemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWc-VP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~ 223 (425)
T PF12897_consen 145 GIEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWC-VPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYD 223 (425)
T ss_dssp T-EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE--SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSS
T ss_pred CcEEEecCCCCCCCCHHHHHHHHhcCCccceEEe-CCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccc
Confidence 999888864 38999999984 335899887 45 499999999777777763 568999999998865431
Q ss_pred -cc-------c----ccC---CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHH---HHHHHhH
Q 009172 342 -KA-------L----SLG---ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAA---YLIIRGM 403 (541)
Q Consensus 342 -~~-------l----~~g---aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a---~l~l~~l 403 (541)
.+ + +.| .-++..|+||.--++++ .+++.++++-++.+++..........-.+. ...++..
T Consensus 224 ~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaG--va~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d~ 301 (425)
T PF12897_consen 224 EEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAG--VAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFKDA 301 (425)
T ss_dssp SSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS---EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHSH
T ss_pred cccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcc--eeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhcCh
Confidence 11 1 112 23778899995444332 478888887777766654433333222222 2222333
Q ss_pred H-HHHHHHHHHHHH----HHHHHHHHHhC----CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHH
Q 009172 404 K-TLHLRVQQQNST----ALRMAEILEAH----PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFID 474 (541)
Q Consensus 404 ~-tl~~r~~~~~~n----a~~la~~L~~~----p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~ 474 (541)
+ .+...|++|.+. .+.+.+.|+++ .++..+..|. +|.+|+|++..+ .+++.++
T Consensus 302 ~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~----------------GGYFIsld~~~G--~AkrvV~ 363 (425)
T PF12897_consen 302 EGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPK----------------GGYFISLDVLDG--TAKRVVE 363 (425)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---S----------------BSS-EEEEESTT---HHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCC----------------CceEEEEecCCC--hHHHHHH
Confidence 3 444555555432 23333344332 2455665553 688999998754 3455555
Q ss_pred HcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 009172 475 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVL 535 (541)
Q Consensus 475 ~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~ 535 (541)
..+..|+.....|. ..|... .-.+..|||.-.....+++-..++
T Consensus 364 lakeAGV~LT~AGA----tfPyg~-------------DP~D~nIRiAPS~P~leel~~Am~ 407 (425)
T PF12897_consen 364 LAKEAGVALTPAGA----TFPYGK-------------DPRDSNIRIAPSYPSLEELETAMD 407 (425)
T ss_dssp HHHHTTEE---TTT----TSGGG---------------TTS-EEEE--SSS-HHHHHHHHH
T ss_pred HHHHhCceeCCCCC----CCCCCC-------------CCCCCcEEecCCCCCHHHHHHHHH
Confidence 55666665554222 112110 113679999999988887665554
No 356
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.28 E-value=2e-10 Score=121.38 Aligned_cols=224 Identities=18% Similarity=0.234 Sum_probs=143.1
Q ss_pred CCchhHHHHHH----HHHHHhCCC---------cEEEeCCHHHHHHHHHHHhc--------cCC-----C-EEEEcCCCC
Q 009172 207 YGNPTTVVVEE----KMSALEGAE---------STVIMASGMSASTVMLLALV--------PAG-----G-HIVTTTDCY 259 (541)
Q Consensus 207 ~~~p~~~~Le~----~LA~l~g~~---------~~i~~sSG~~Ai~~al~all--------~~G-----D-~VIv~~~~y 259 (541)
...|...++|+ .+++++|.+ ..+++++|++++..++.+.- ..| . .|++++..|
T Consensus 72 ~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH 151 (373)
T PF00282_consen 72 EASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAH 151 (373)
T ss_dssp TTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-
T ss_pred ccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccc
Confidence 34566666665 555666754 37889999999887775431 112 2 577777788
Q ss_pred cchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccCC----Cee-EEEEeCCCCCCCcccCHHHHHHHHHhCCCEE
Q 009172 260 RKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNN----NVS-LFFTESPTNPFLRCVDVKLVSDLCHKKGAIV 329 (541)
Q Consensus 260 ~~~~~~~~~~l~~~Gi~v~~vd~~-----dle~Le~ai~~~----~tk-lV~lesp~NPtG~v~di~~Ia~la~~~gill 329 (541)
.+.. +.+..+|+.++.++.+ |+++|+++|.+. ++- +|+....+..+|.+-|+++|+++|+++++++
T Consensus 152 ~S~~----Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wl 227 (373)
T PF00282_consen 152 YSIE----KAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWL 227 (373)
T ss_dssp THHH----HHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EE
T ss_pred cHHH----HhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceee
Confidence 7754 4455567777777543 788888877431 223 5666677788999999999999999999999
Q ss_pred EEEcCCCCCCc----ccccc---cCCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHH----HHhh------------
Q 009172 330 CIDGTFATPLN----QKALS---LGADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIR----NLHH------------ 385 (541)
Q Consensus 330 vvDea~a~~~~----~~~l~---~gaDivv~S~sK~lgg~g~v~gG~vv~~~-~li~~l~----~~~~------------ 385 (541)
+||.+|+.... .+.+. ..+|-+..++||+++.+-+ .|+++.++ ....... .+..
T Consensus 228 HVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~--~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~ 305 (373)
T PF00282_consen 228 HVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYG--CGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDY 305 (373)
T ss_dssp EEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS---EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCE
T ss_pred eecccccccccccccccccccccccccccccchhhhhcCCcc--ceeEEeecccchHHHhccChhhhccccccccccccc
Confidence 99999887332 12222 2478899999999997763 56666554 3332211 0000
Q ss_pred -hc---CCC-ccHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCC
Q 009172 386 -VL---GGA-LNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYP 436 (541)
Q Consensus 386 -~~---g~~-~s~~~a~l~l~--~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~P 436 (541)
.. ++. ...+..|+.++ |.+.+..++++..+.+++++++|++++.++-+.-|
T Consensus 306 ~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~ 363 (373)
T PF00282_consen 306 GDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEP 363 (373)
T ss_dssp EEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTT
T ss_pred ccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 00 011 12344565544 56778889999999999999999999886644433
No 357
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.28 E-value=1.1e-09 Score=115.45 Aligned_cols=205 Identities=14% Similarity=0.133 Sum_probs=134.5
Q ss_pred hhHHHHHHHHHHHhCCC---cE-EEeCCHHHHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHhhcccCCc-EEEEeCC-
Q 009172 210 PTTVVVEEKMSALEGAE---ST-VIMASGMSASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPKMGI-TATVIDP- 282 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~---~~-i~~sSG~~Ai~~al~all-~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi-~v~~vd~- 282 (541)
....+.++.|.++++.+ ++ ++.+||+.++++++..++ ++||+|++.. .|+. ++..++++.+|+ ++..++.
T Consensus 39 ~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~--r~~~eia~~~g~~~v~~l~~~ 115 (374)
T TIGR01365 39 EKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGK--GWVTDVTKQLKLPDVRVLEAE 115 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHH--HHHHHHHHhcCCCCcEEEcCC
Confidence 35566788888888852 23 456788999999999999 5899888754 4433 333366777788 4665542
Q ss_pred ----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEEEECCcc
Q 009172 283 ----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATK 357 (541)
Q Consensus 283 ----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDivv~S~sK 357 (541)
.++++++. ++ .|++.+--..||...|+++|.+.. +++++|||.+-+.+ ...+.. ++|+++.|..|
T Consensus 116 ~g~~~~~~~ve~--~~----~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d--~iDv~~tgsQK 185 (374)
T TIGR01365 116 YGKLPDLKKVDF--KN----DVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH--KLDVVTFSWQK 185 (374)
T ss_pred CCCCCCHHHcCC--CC----CEEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh--HCcEEEEechh
Confidence 36777762 22 234444445679999997666332 58999999984432 222222 49999999999
Q ss_pred ccCCCCCceEEEEEeChHHHHHHHHHh---------h----------hc-C---CCccHHHHHHHHHhHH------HHHH
Q 009172 358 FIGGHNDVLAGSISGSGKLVTQIRNLH---------H----------VL-G---GALNPNAAYLIIRGMK------TLHL 408 (541)
Q Consensus 358 ~lgg~g~v~gG~vv~~~~li~~l~~~~---------~----------~~-g---~~~s~~~a~l~l~~l~------tl~~ 408 (541)
.++++++ .++++.+++.+++..... . .. + .+++....+.+...++ .++.
T Consensus 186 ~L~~ppG--ls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~ 263 (374)
T TIGR01365 186 VLGGEGA--HGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKP 263 (374)
T ss_pred ccCCCCc--eEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHH
Confidence 9998873 577888887776544210 0 01 1 1222333344444442 2677
Q ss_pred HHHHHHHHHHHHHHHHHhCCC
Q 009172 409 RVQQQNSTALRMAEILEAHPK 429 (541)
Q Consensus 409 r~~~~~~na~~la~~L~~~p~ 429 (541)
+.+++.++++.+.+++++...
T Consensus 264 ~~~Rh~~~a~~l~~~l~~lg~ 284 (374)
T TIGR01365 264 LIARADDNLAVLEAFVAKNNW 284 (374)
T ss_pred HHHHHHHHHHHHHHHHHHCCC
Confidence 888999999999999998753
No 358
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.27 E-value=6.6e-10 Score=119.95 Aligned_cols=156 Identities=22% Similarity=0.335 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC-------
Q 009172 211 TTVVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP------- 282 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~------- 282 (541)
...+.++..|+.+|++...++.+|+ .|+..++++++++||.|++++++|-+....+ -..|...+++.+
T Consensus 71 ~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~gl----ilaGa~Pvyl~p~~np~~g 146 (557)
T COG1982 71 PIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGL----ILAGATPVYLEPSRNPLYG 146 (557)
T ss_pred cHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHH----HHcCCceEEecCCCCcccc
Confidence 5778899999999999999999998 8999999999999999999999999866442 223666555542
Q ss_pred ----CCHHHHHHhccCCC-e-eEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCc------ccccccCCcE
Q 009172 283 ----ADMEGLEAALNNNN-V-SLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLGADL 350 (541)
Q Consensus 283 ----~dle~Le~ai~~~~-t-klV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~------~~~l~~gaDi 350 (541)
.+.+.+++++.+++ . |++++.+|+ -.|.+.++++|.++++.+++++.+|++...... ....+.|+|+
T Consensus 147 i~ggI~~~~~~~~l~~~~~~~k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~ 225 (557)
T COG1982 147 IIGGIPLETFKEALLAHPDAEKLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADF 225 (557)
T ss_pred ccCCCCHHHHHHHHHhChhhheeEEEecCc-cceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceE
Confidence 36788887765432 4 788885555 469999999999999999999999999554221 2233478999
Q ss_pred EEECCccccCCCCCceEEEEEeC
Q 009172 351 VLHSATKFIGGHNDVLAGSISGS 373 (541)
Q Consensus 351 vv~S~sK~lgg~g~v~gG~vv~~ 373 (541)
++.|.||.+++.+ .+.++-.+
T Consensus 226 ~tqS~HK~l~alS--QaS~iHv~ 246 (557)
T COG1982 226 VTQSTHKLLAALS--QASMIHVK 246 (557)
T ss_pred EEechhhhhhhhh--hhHHHhhC
Confidence 9999999999775 45555544
No 359
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.26 E-value=1.2e-09 Score=109.22 Aligned_cols=161 Identities=18% Similarity=0.272 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHhc--cCCCEEEEcCCC-CcchHHHHHhhcccCCcEEEEeCCCCHH
Q 009172 212 TVVVEEKMSALEGAE-STVIMASGM-SASTVMLLALV--PAGGHIVTTTDC-YRKTRIFIETVLPKMGITATVIDPADME 286 (541)
Q Consensus 212 ~~~Le~~LA~l~g~~-~~i~~sSG~-~Ai~~al~all--~~GD~VIv~~~~-y~~~~~~~~~~l~~~Gi~v~~vd~~dle 286 (541)
-+.|-.+||-+.|+. ..++.+.++ --++-+|.+.+ ++|+.||+++-. |+.-+.....+.+..++.....-.+.++
T Consensus 78 p~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~ 157 (407)
T COG3844 78 PERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPR 157 (407)
T ss_pred hhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChH
Confidence 456788899999983 344444444 44455555544 458888887654 4443333333444444432222234678
Q ss_pred HHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEEEECCccccCCCCCc
Q 009172 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDV 365 (541)
Q Consensus 287 ~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDivv~S~sK~lgg~g~v 365 (541)
+++++++++ +.+|++.+.+--||...|+.+|.+++|++|++++-|=+++.+ ++.+.-..|+|+-|.+.+||++|+.+.
T Consensus 158 ~~~~~~~dd-~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGa 236 (407)
T COG3844 158 ALEEAITDD-VAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGA 236 (407)
T ss_pred HHHHhhccc-eEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCC
Confidence 999999985 999999998888999999999999999999999999998765 345556779999999999999987666
Q ss_pred eEEEEEeC
Q 009172 366 LAGSISGS 373 (541)
Q Consensus 366 ~gG~vv~~ 373 (541)
.+|+.+.+
T Consensus 237 pa~l~v~~ 244 (407)
T COG3844 237 PAGLFVAP 244 (407)
T ss_pred ceeEEecc
Confidence 67766654
No 360
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.25 E-value=1.1e-09 Score=118.60 Aligned_cols=282 Identities=11% Similarity=0.060 Sum_probs=159.5
Q ss_pred CCchhHHHHHHHHHH----HhC--CCcEEEeCCHHHHHHHHHHHhcc--------------------------CC---CE
Q 009172 207 YGNPTTVVVEEKMSA----LEG--AESTVIMASGMSASTVMLLALVP--------------------------AG---GH 251 (541)
Q Consensus 207 ~~~p~~~~Le~~LA~----l~g--~~~~i~~sSG~~Ai~~al~all~--------------------------~G---D~ 251 (541)
+.++...+|.++|++ +.. .+.+++++||++|+..+++.... +| .+
T Consensus 98 ~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ 177 (464)
T TIGR00699 98 LGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLS 177 (464)
T ss_pred CCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCE
Confidence 567777777777754 443 25688889999999999874310 11 27
Q ss_pred EEEcCCCCcchHHHHHhhc-----ccCCc---EEEEeCC-------------------CCHHHHHHhccC--CCeeEEEE
Q 009172 252 IVTTTDCYRKTRIFIETVL-----PKMGI---TATVIDP-------------------ADMEGLEAALNN--NNVSLFFT 302 (541)
Q Consensus 252 VIv~~~~y~~~~~~~~~~l-----~~~Gi---~v~~vd~-------------------~dle~Le~ai~~--~~tklV~l 302 (541)
||.....|++.....-... ...+. .+.+++. .+++.++++++. +++.+|++
T Consensus 178 ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~ 257 (464)
T TIGR00699 178 ILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIV 257 (464)
T ss_pred EEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 9999999988532211110 01011 1111110 135567777742 25899999
Q ss_pred eCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCC-C-----cccccccC--CcEEEECCccccCCCCCceEEEE
Q 009172 303 ESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP-L-----NQKALSLG--ADLVLHSATKFIGGHNDVLAGSI 370 (541)
Q Consensus 303 esp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~-~-----~~~~l~~g--aDivv~S~sK~lgg~g~v~gG~v 370 (541)
|......|.+.+ +++|.++|++||+++|+||++... . ........ .|+++ ++|.+++. |++
T Consensus 258 EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t--~gK~lg~g-----G~~ 330 (464)
T TIGR00699 258 EPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVT--FSKKFQTA-----GYF 330 (464)
T ss_pred eCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEE--ehhhhccC-----Ccc
Confidence 999888898887 999999999999999999996321 1 11112222 78866 78999632 333
Q ss_pred EeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHh----CC-CceEEeCCCCCCCch
Q 009172 371 SGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLR--VQQQNSTALRMAEILEA----HP-KVKRVHYPGLKSHPE 443 (541)
Q Consensus 371 v~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~r--~~~~~~na~~la~~L~~----~p-~v~~V~~Pgl~s~p~ 443 (541)
++++ .+..............+|..+.+++..|+.+... .++..+..+++.+.|++ +| .|..|..
T Consensus 331 ~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg-------- 401 (464)
T TIGR00699 331 FHDP-AFRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRG-------- 401 (464)
T ss_pred ccch-hccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc--------
Confidence 3332 2111011111111123566666666666655321 12222223444444443 33 2222211
Q ss_pred hhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEec
Q 009172 444 HHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFG 523 (541)
Q Consensus 444 ~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG 523 (541)
.|.|.|+.++++. ......+++.+...|+-+... ..+.|||+.-
T Consensus 402 --------~G~Glm~gie~~~-~~~~~~i~~~~~~~Gvl~~~~---------------------------g~~~ir~~Pp 445 (464)
T TIGR00699 402 --------KGRGTFIAWDTPD-EAKRDKLLKKARNNGVNIGGC---------------------------GVKAIRLRPM 445 (464)
T ss_pred --------cCeEEEEEEecCC-HHHHHHHHHHHHHCCcEEecC---------------------------CCCeEEEeCC
Confidence 1578899999963 344566776665545433210 1357888887
Q ss_pred CCCHHHHHHHHHHHHhh
Q 009172 524 VEDFEDLKADVLQALHA 540 (541)
Q Consensus 524 ~Ed~edli~dL~~AL~~ 540 (541)
+--+++.++.+.++|++
T Consensus 446 l~it~~eid~~~~~l~~ 462 (464)
T TIGR00699 446 LVFQKHHADIFLEIISK 462 (464)
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 76666666666666653
No 361
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.24 E-value=7.6e-09 Score=107.18 Aligned_cols=161 Identities=24% Similarity=0.373 Sum_probs=122.5
Q ss_pred HHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHH
Q 009172 213 VVVEEKMSALEGAE--STVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEG 287 (541)
Q Consensus 213 ~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~al---l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~ 287 (541)
-++...+++|.|-+ .+=++-.|+++-++++++. -++.++++++...|+.+...++...+.+|+++..++.+|+++
T Consensus 123 fefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~ 202 (450)
T COG0403 123 FEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDD 202 (450)
T ss_pred HHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhh
Confidence 34578889999964 4556666665545555443 223589999999999999999888999999999999999999
Q ss_pred HHHhccCCCeeEEEEeCCCCCCC-cccCHHHHHHHHHhCCCEEEEEcC-CCCCCcccccccCCcEEEECCccc-----cC
Q 009172 288 LEAALNNNNVSLFFTESPTNPFL-RCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSATKF-----IG 360 (541)
Q Consensus 288 Le~ai~~~~tklV~lesp~NPtG-~v~di~~Ia~la~~~gillvvDea-~a~~~~~~~l~~gaDivv~S~sK~-----lg 360 (541)
++++ ++..+..|+++.|+ -.| ...|+.+|.+.+|++|+++++=.- .+-.+...|-++|+||++.+..-+ ||
T Consensus 203 l~~~-~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfG 280 (450)
T COG0403 203 LESA-DDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFG 280 (450)
T ss_pred hhhc-cccCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCC
Confidence 9998 54358999999998 566 777899999999999998876332 222445678899999999998764 44
Q ss_pred CCCCceEEEEEeChHHHH
Q 009172 361 GHNDVLAGSISGSGKLVT 378 (541)
Q Consensus 361 g~g~v~gG~vv~~~~li~ 378 (541)
|+. +|+...++++..
T Consensus 281 GPh---ag~fA~~~~~~R 295 (450)
T COG0403 281 GPH---AGYFAVKDEFKR 295 (450)
T ss_pred Ccc---eeeeeEhHhHhh
Confidence 443 688877766543
No 362
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.24 E-value=1.8e-09 Score=123.80 Aligned_cols=162 Identities=20% Similarity=0.254 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHh-c--cCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHH
Q 009172 212 TVVVEEKMSALEGAE--STVIMASGMSASTVMLLAL-V--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (541)
Q Consensus 212 ~~~Le~~LA~l~g~~--~~i~~sSG~~Ai~~al~al-l--~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle 286 (541)
.-++++.++++.|.+ ++-+...++++.++++++. . +++++|++++..|+.+...++..++..|++++.++ ++
T Consensus 111 l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~---~~ 187 (939)
T TIGR00461 111 LLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD---CS 187 (939)
T ss_pred HHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc---HH
Confidence 445688999999986 4466667776556555553 2 23489999999999999888877888899998875 45
Q ss_pred HHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCC-CCcccccccCCcEEEECCccccCCCC--
Q 009172 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLHSATKFIGGHN-- 363 (541)
Q Consensus 287 ~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~-~~~~~~l~~gaDivv~S~sK~lgg~g-- 363 (541)
+|++.+ + +..|++.+|+ -+|.+.|+++|++++|++|++++++.-... .....|-++|+||++.+..++.-+++
T Consensus 188 ~l~~~~--~-~~~v~~q~Pn-~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~G 263 (939)
T TIGR00461 188 DIKKAV--D-VFGCLLQYPA-TDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYG 263 (939)
T ss_pred HHhhcC--C-EEEEEEECCC-CCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCC
Confidence 676665 2 7888898887 689999999999999999999999765433 34567889999999887666544221
Q ss_pred CceEEEEEeChHHHHHH
Q 009172 364 DVLAGSISGSGKLVTQI 380 (541)
Q Consensus 364 ~v~gG~vv~~~~li~~l 380 (541)
+.-+|++..++++..++
T Consensus 264 GP~aG~~a~~~~l~r~l 280 (939)
T TIGR00461 264 GPHAAFFAVKDEYNRKM 280 (939)
T ss_pred CCceeeeeecHhhHhhC
Confidence 12378888887766553
No 363
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.23 E-value=5.4e-09 Score=119.72 Aligned_cols=238 Identities=15% Similarity=0.166 Sum_probs=143.7
Q ss_pred CCCchhHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhcc---------------------CCCEEEEcCCCCcc
Q 009172 206 RYGNPTTVVVEEKMSALEGA---ESTVIMASGMSASTVMLLALVP---------------------AGGHIVTTTDCYRK 261 (541)
Q Consensus 206 R~~~p~~~~Le~~LA~l~g~---~~~i~~sSG~~Ai~~al~all~---------------------~GD~VIv~~~~y~~ 261 (541)
.+.++...+|.++|.+..+. ..+++++||++|++.+++-..+ ...+||.-...|++
T Consensus 405 ~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG 484 (817)
T PLN02974 405 ENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHG 484 (817)
T ss_pred ccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCC
Confidence 45778888899999887652 4678888999999888763211 12469999999888
Q ss_pred h-HHHHHhh--------c-cc----CCcEE----EE---------eCCC-------------------------------
Q 009172 262 T-RIFIETV--------L-PK----MGITA----TV---------IDPA------------------------------- 283 (541)
Q Consensus 262 ~-~~~~~~~--------l-~~----~Gi~v----~~---------vd~~------------------------------- 283 (541)
. ...+... . .. .+..+ .+ ++..
T Consensus 485 ~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~ 564 (817)
T PLN02974 485 DTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKA 564 (817)
T ss_pred CCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHH
Confidence 3 2111100 0 00 00000 00 0000
Q ss_pred CHHHHHHhcc-------CCCeeEEEEeCC-CCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCC------Ccccccc
Q 009172 284 DMEGLEAALN-------NNNVSLFFTESP-TNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------LNQKALS 345 (541)
Q Consensus 284 dle~Le~ai~-------~~~tklV~lesp-~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~------~~~~~l~ 345 (541)
..+.+++.|. .+++.+|++|.. ..-.|.+.+ +++|.++|++||+++|.||++... +..+.+.
T Consensus 565 ~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~g 644 (817)
T PLN02974 565 YRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLG 644 (817)
T ss_pred HHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcC
Confidence 0144666553 235899999985 566677765 789999999999999999996542 1122233
Q ss_pred cCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH------HhhhcCCCccHHHHHHHHHhHHHHHHH--HHHHHHHH
Q 009172 346 LGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN------LHHVLGGALNPNAAYLIIRGMKTLHLR--VQQQNSTA 417 (541)
Q Consensus 346 ~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~------~~~~~g~~~s~~~a~l~l~~l~tl~~r--~~~~~~na 417 (541)
.-.||++ +.|.++|+- +..|++++++++.+.+.. +.+......+|..+.+++..|+.+... .+...++.
T Consensus 645 v~PDIi~--~gKgLtgG~-~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~ 721 (817)
T PLN02974 645 CKPDIAC--YAKLLTGGL-VPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPG 721 (817)
T ss_pred CCCCEEe--ecccccCCC-CccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 3468887 789998652 235777788888877642 111112235678888877777765431 11222333
Q ss_pred HHHH--------HHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC
Q 009172 418 LRMA--------EILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG 464 (541)
Q Consensus 418 ~~la--------~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g 464 (541)
..+. +.|.++|.|..| +|.|.|+.+++..
T Consensus 722 ~~l~~~l~~~l~~~l~~~p~V~~V------------------Rg~Gl~~~iel~~ 758 (817)
T PLN02974 722 SRLRELWDEELVRAISSLPNVERV------------------VSLGTVLALELDA 758 (817)
T ss_pred HHHHHHHHHHHHHHHhhCCCeeEE------------------EeeeeEEEEEEec
Confidence 2222 233445555544 4567899999963
No 364
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.23 E-value=1.7e-09 Score=110.47 Aligned_cols=263 Identities=18% Similarity=0.195 Sum_probs=163.3
Q ss_pred CCCCCCCchhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHh-ccCC-CEEEEcCCCCcchHHHHHhh--cccC--
Q 009172 202 FEYGRYGNPTTVVVEEKMSALEGA--ESTVIMASGMSASTVMLLAL-VPAG-GHIVTTTDCYRKTRIFIETV--LPKM-- 273 (541)
Q Consensus 202 ~~Y~R~~~p~~~~Le~~LA~l~g~--~~~i~~sSG~~Ai~~al~al-l~~G-D~VIv~~~~y~~~~~~~~~~--l~~~-- 273 (541)
|...-|.+|...++.++|++.+.. ..+++++||++|+.++++-. +-.| -+||.-+..|++.....-.+ +..+
T Consensus 84 H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~ 163 (442)
T KOG1404|consen 84 HTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQ 163 (442)
T ss_pred EeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccc
Confidence 455667788888998888888865 45788899999999988633 2222 37888888888743221000 1100
Q ss_pred ---Cc--EEEEe-CCC--------C---------HHHHHHhcc---CCCeeEEEEeCCCCCCCcccC----HHHHHHHHH
Q 009172 274 ---GI--TATVI-DPA--------D---------MEGLEAALN---NNNVSLFFTESPTNPFLRCVD----VKLVSDLCH 323 (541)
Q Consensus 274 ---Gi--~v~~v-d~~--------d---------le~Le~ai~---~~~tklV~lesp~NPtG~v~d----i~~Ia~la~ 323 (541)
+. .+... .++ + .+++++.+. +.++.+.+.|++....|.+.+ +++..++|+
T Consensus 164 ~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~ 243 (442)
T KOG1404|consen 164 NFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVR 243 (442)
T ss_pred cCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHH
Confidence 00 01111 010 1 234444442 335788999999988888865 889999999
Q ss_pred hCCCEEEEEcCCCC----CCcccccccC--CcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh-hhcCCCccHHHH
Q 009172 324 KKGAIVCIDGTFAT----PLNQKALSLG--ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH-HVLGGALNPNAA 396 (541)
Q Consensus 324 ~~gillvvDea~a~----~~~~~~l~~g--aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~-~~~g~~~s~~~a 396 (541)
++|.++|.||++.. +.......+| .||+ ++.|.+|.+ ...|.++..+++.+.+.+.. ..+.-.-+|..+
T Consensus 244 k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIv--TmAKgiGnG--~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~ 319 (442)
T KOG1404|consen 244 KRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIV--TMAKGIGNG--FPLGAVVTTPEIADVLNQKSSHFNTYGGNPVAC 319 (442)
T ss_pred HcCCEEEehhhhhccccccccccccccCCCccHH--HHHhhccCC--CcceeeecCHHHHHHHHhccccccccCCCchhH
Confidence 99999999999543 2111122233 3555 599999865 34677888888888777544 222222357777
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHh--------CCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCH--
Q 009172 397 YLIIRGMKTLHLRVQQQNSTALRMAEILEA--------HPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDL-- 466 (541)
Q Consensus 397 ~l~l~~l~tl~~r~~~~~~na~~la~~L~~--------~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~-- 466 (541)
...+..|+-+. .+++++|+..+..+|.+ ||.|..| +|.|-|+.+|+-++.
T Consensus 320 avg~aVL~Vik--ee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdV------------------RG~GLm~GvE~V~dk~~ 379 (442)
T KOG1404|consen 320 AVGLAVLKVIK--EENLQENAAEVGSYLLEKLAALKDKHPIIGDV------------------RGRGLMLGVELVSDKSE 379 (442)
T ss_pred HHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhhcCCceeec------------------ccceeEEEEEEecccCC
Confidence 77666666544 34556666666655543 3434333 567889999985431
Q ss_pred ------HHHHHHHHHcCCCceeecCCCc
Q 009172 467 ------TATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 467 ------~~~~~~l~~L~~~~iavS~G~~ 488 (541)
.....+.+.++..|+-+.-|+.
T Consensus 380 ~~pp~~~~~~~i~~~cke~Gvlvg~g~i 407 (442)
T KOG1404|consen 380 PKPPATAEGAVIGEQCKELGVLVGKGGI 407 (442)
T ss_pred CCCcchHHHHHHHHHHHHhCeeeecccc
Confidence 2345566777776776666554
No 365
>PLN02452 phosphoserine transaminase
Probab=99.22 E-value=2.9e-09 Score=112.13 Aligned_cols=244 Identities=11% Similarity=0.026 Sum_probs=155.6
Q ss_pred hhHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe---C-
Q 009172 210 PTTVVVEEKMSALEGAE---STVIM-ASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI---D- 281 (541)
Q Consensus 210 p~~~~Le~~LA~l~g~~---~~i~~-sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v---d- 281 (541)
...++.++.|.++++.+ +++++ +||+.++.+++..++.+||++++....+.+-. +.+.++++|...+.. +
T Consensus 52 ~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r--~~~~a~~~g~~~~~~~~~~~ 129 (365)
T PLN02452 52 SIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKK--AAKEAKKYCKTNVIASGKDE 129 (365)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCCcEEEecCCC
Confidence 45677888999999863 35555 66779999999999999998887766555532 334566666543333 1
Q ss_pred ----CCCHHHHHHhccCCCeeEEEEeCCCCCCCcc-cCHHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEEEECC
Q 009172 282 ----PADMEGLEAALNNNNVSLFFTESPTNPFLRC-VDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 355 (541)
Q Consensus 282 ----~~dle~Le~ai~~~~tklV~lesp~NPtG~v-~di~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDivv~S~ 355 (541)
..++++++ .++ +.+.|++++-...||.. .|++++. ++++|+|.+...+ .+.+..++|+|+ .|.
T Consensus 130 ~~~~~~~~~~~~--~~~-~~~~v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~~--~sa 198 (365)
T PLN02452 130 KYTKIPSVSEWE--LTP-DAKFVHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGVIY--AGA 198 (365)
T ss_pred CCCCCCChHHcC--CCC-CCcEEEECCCCCCCcEecCcccccC------CCeEEEECCccccCcccCHHHcCEEE--Eec
Confidence 12444442 223 37788876655667984 7777764 3899999996553 345555666654 699
Q ss_pred ccccCCCCCceEEEEEeChHHHHHHHHH-------hh-----hcCCCccHHHHHHHHHhHHH------HHHHHHHHHHHH
Q 009172 356 TKFIGGHNDVLAGSISGSGKLVTQIRNL-------HH-----VLGGALNPNAAYLIIRGMKT------LHLRVQQQNSTA 417 (541)
Q Consensus 356 sK~lgg~g~v~gG~vv~~~~li~~l~~~-------~~-----~~g~~~s~~~a~l~l~~l~t------l~~r~~~~~~na 417 (541)
+|.+|++| .|+++.++++++++... .. .+-.+++....+.+...++. ++.+.+++.+.+
T Consensus 199 qK~lGP~G---l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a 275 (365)
T PLN02452 199 QKNVGPSG---VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKA 275 (365)
T ss_pred ccccCCCC---eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 99998777 57888888877664321 10 00124444445554444444 345566777888
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceee
Q 009172 418 LRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAP 483 (541)
Q Consensus 418 ~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iav 483 (541)
+.+.++|++.+++ +.+.. .+.+ ....+++|.+++. +...+|++.++..|+..
T Consensus 276 ~~l~~~l~~~~G~---y~~~~--~~~~--------rs~~~vsF~~~~~-~~~~~f~~~~~~~g~~~ 327 (365)
T PLN02452 276 DLLYDAIDESNGF---YVCPV--EKSV--------RSLMNVPFTLGGS-ELEAEFVKEAAKAGMVQ 327 (365)
T ss_pred HHHHHHHHhCCCc---ccCCC--ChHH--------hCCeEEEEEcCCc-hhHHHHHHHHHHCCCcc
Confidence 8999999886654 11111 1111 1345789999764 46778999888766543
No 366
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.20 E-value=3.6e-09 Score=105.78 Aligned_cols=237 Identities=19% Similarity=0.213 Sum_probs=152.9
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc------c--CCC--EEEEcCCCCcc-hHH---------HHHh
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALV------P--AGG--HIVTTTDCYRK-TRI---------FIET 268 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all------~--~GD--~VIv~~~~y~~-~~~---------~~~~ 268 (541)
|...-++++.+.+++|.+..+-+++|.+|.+.++...- + |.| .|+.....|++ +.. .+..
T Consensus 100 nd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~ 179 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDG 179 (427)
T ss_pred hhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhc
Confidence 34566889999999999999999999999999875321 2 323 45555556655 211 1111
Q ss_pred hcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCC------
Q 009172 269 VLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------ 338 (541)
Q Consensus 269 ~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~------ 338 (541)
.-+-..-.+..++-.|.++|+.+++..+++++++|.++...|.+.| ++++.++|.+|++++|.||++...
T Consensus 180 fgp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~ 259 (427)
T KOG1402|consen 180 FGPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKL 259 (427)
T ss_pred cCCCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcE
Confidence 1111111255567789999999998777999999999999999987 889999999999999999996531
Q ss_pred CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 009172 339 LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTAL 418 (541)
Q Consensus 339 ~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~ 418 (541)
+..+....-.|+|+ +.|.++|+--.+.+ ++.+++++-.++...+...-.-+|+.+..+...|+.+. .++..+++.
T Consensus 260 la~d~env~PDivi--lgKalSGG~~Pvsa-vl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~--eekL~era~ 334 (427)
T KOG1402|consen 260 LACDYENVRPDIVI--LGKALSGGVYPVSA-VLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIV--EEKLVERAA 334 (427)
T ss_pred EEeehhhcCCCeEE--EeccccCCeeeeEE-EEecHHHHhccCCCccccccCCChHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 22333344578998 78999876433344 44566665545443221111235777777666776654 345556666
Q ss_pred HHHHHH----HhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEc
Q 009172 419 RMAEIL----EAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVD 463 (541)
Q Consensus 419 ~la~~L----~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~ 463 (541)
.|.+.| .+.+. .+|. ..+..+|.|-+..+++.
T Consensus 335 ~lG~~l~~~L~~l~~----~~p~---------~v~~VRGrGl~~ai~i~ 370 (427)
T KOG1402|consen 335 KLGEILRDQLNKLQK----KFPH---------VVKEVRGRGLLNAIVIN 370 (427)
T ss_pred HHHHHHHHHHHhccc----cccc---------hhheeeccceEEEEEec
Confidence 665544 33321 1121 12334677878888876
No 367
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.20 E-value=9.9e-10 Score=116.00 Aligned_cols=241 Identities=18% Similarity=0.112 Sum_probs=148.2
Q ss_pred cccCccc-cCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc-CCCEEEEc
Q 009172 178 VNTSAYF-FKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-AGGHIVTT 255 (541)
Q Consensus 178 ~~sst~~-~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~-~GD~VIv~ 255 (541)
++|.|.+ -++.++...... +.-.|+ ++|+..+|++.+++++|.+.++.+.+|..+...++..+++ +||++++.
T Consensus 46 LrSDTgT~apS~~m~aAM~~---GDD~Y~--gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~ 120 (467)
T TIGR02617 46 LLTDSGTGAVTQSMQAAMMR---GDEAYS--GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLD 120 (467)
T ss_pred CccCCCCCCCCHHHHHHHHc---CCcccc--cCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhccccccccccc
Confidence 4566666 366665555543 233455 7899999999999999999999999999998899888888 78877754
Q ss_pred CC----CCcchHHHHHhhcccCCcEEEEe--------------C-CCCHHHHHHhccC---CCeeEEEEeCCCCC-CCcc
Q 009172 256 TD----CYRKTRIFIETVLPKMGITATVI--------------D-PADMEGLEAALNN---NNVSLFFTESPTNP-FLRC 312 (541)
Q Consensus 256 ~~----~y~~~~~~~~~~l~~~Gi~v~~v--------------d-~~dle~Le~ai~~---~~tklV~lesp~NP-tG~v 312 (541)
.. .|...+..........|+.+..+ + ..|+++|+++|++ +++-.+.+.-.+|- .|.+
T Consensus 121 ~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqp 200 (467)
T TIGR02617 121 RSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQP 200 (467)
T ss_pred ccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEE
Confidence 43 11111110001112224433321 1 2389999999974 22334444333454 4677
Q ss_pred cC---HHHHHHHHHhCCCEEEEEcC--C--CC-------CCcccc---c----ccCCcEEEECCccccCCCCCceEEEEE
Q 009172 313 VD---VKLVSDLCHKKGAIVCIDGT--F--AT-------PLNQKA---L----SLGADLVLHSATKFIGGHNDVLAGSIS 371 (541)
Q Consensus 313 ~d---i~~Ia~la~~~gillvvDea--~--a~-------~~~~~~---l----~~gaDivv~S~sK~lgg~g~v~gG~vv 371 (541)
++ ++++.++|++||+.++.|.+ + +. .+...+ . ...+|.+..|++|-++.+ +||+++
T Consensus 201 vslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgAp---vGg~La 277 (467)
T TIGR02617 201 VSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVP---MGGLLC 277 (467)
T ss_pred eCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCc---ccceEE
Confidence 77 55888999999999999997 2 11 111111 1 146899999999999876 588999
Q ss_pred eChH----HHHHHHHHhh------hcCCCccHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHhC
Q 009172 372 GSGK----LVTQIRNLHH------VLGGALNPNAAYLIIRGMKTL--HLRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 372 ~~~~----li~~l~~~~~------~~g~~~s~~~a~l~l~~l~tl--~~r~~~~~~na~~la~~L~~~ 427 (541)
++++ +.++++.... .+| .++.-+...+..||+.. ...++......++|.+.|.+.
T Consensus 278 g~d~~~~~l~~~~~~~~i~~EGf~tYG-Glagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~ 344 (467)
T TIGR02617 278 FKDDSFFDVYTECRTLCVVQEGFPTYG-GLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEI 344 (467)
T ss_pred ecchhHHHHHHHHHhhcccccCCcCcC-chhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhC
Confidence 8764 3344443221 223 34444433334455432 223444455668888888774
No 368
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.18 E-value=6.8e-09 Score=110.03 Aligned_cols=275 Identities=16% Similarity=0.154 Sum_probs=154.9
Q ss_pred hHHHHHHHHHHHhCCCcE--EEeCCHH---HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCH
Q 009172 211 TTVVVEEKMSALEGAEST--VIMASGM---SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADM 285 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~~~--i~~sSG~---~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dl 285 (541)
..-+++..|+++.|-+-+ =+...++ +|+.++.+.--+.+++|+++...|+.+...++..+...|++++.++..+.
T Consensus 111 ~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~ 190 (429)
T PF02347_consen 111 ALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDED 190 (429)
T ss_dssp HHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTT
T ss_pred HHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEeccccc
Confidence 445678999999998632 3344444 45544444433445699999999999998888888888999998875421
Q ss_pred HHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcC--CCCCCcccccccCCcEEEECCccccCCC-
Q 009172 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT--FATPLNQKALSLGADLVLHSATKFIGGH- 362 (541)
Q Consensus 286 e~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea--~a~~~~~~~l~~gaDivv~S~sK~lgg~- 362 (541)
.... ++ ++.+|++++|| -.|.+.|+++|.+++|++|+++++ .+ -+-.....|-++|+||++.+ +|.||-+
T Consensus 191 ~~~d---~~-~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~ 263 (429)
T PF02347_consen 191 GTTD---DD-DTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPM 263 (429)
T ss_dssp CSB----ST-TEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---
T ss_pred CCcc---cc-CeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccC
Confidence 1111 34 59999999998 589999999999999999999988 55 22244567889999999877 7877622
Q ss_pred --CCceEEEEEeChHHHHHHHHH-------------------------hh---h--cCCCcc----HHHHHHHHHhHHHH
Q 009172 363 --NDVLAGSISGSGKLVTQIRNL-------------------------HH---V--LGGALN----PNAAYLIIRGMKTL 406 (541)
Q Consensus 363 --g~v~gG~vv~~~~li~~l~~~-------------------------~~---~--~g~~~s----~~~a~l~l~~l~tl 406 (541)
|+--.|++..+++++.++-.. ++ . .++... ....|+++.|-+-+
T Consensus 264 ~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL 343 (429)
T PF02347_consen 264 GFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGL 343 (429)
T ss_dssp CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHH
Confidence 222368888877765543210 00 0 011101 12245555565666
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCC
Q 009172 407 HLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFG 486 (541)
Q Consensus 407 ~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G 486 (541)
..--++...++.++++.|.+... +.+. ..+ +-..+....+ + ....+++++....+ +++.
T Consensus 344 ~~iA~~~~~~A~yl~~~L~~~~~---~~~~---~~~-----------f~e~v~~~~~-~-~~~~~l~~~~~~~g--l~~~ 402 (429)
T PF02347_consen 344 REIAERIHLNAHYLAERLKKIYG---LPFD---NPF-----------FFEFVVVFSK-D-KEVEELLKRGIEGG--LNLR 402 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTB---ECSS---SSS-----------BSSEEEEESS---HHHHHHHHTT------EEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC---cccC---CCC-----------ceeeeeecCC-c-HHHHHHHHHHHhcC--CCcc
Confidence 66667778899999999987521 2121 111 1123333333 2 45555666554433 1110
Q ss_pred CcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Q 009172 487 GCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 538 (541)
Q Consensus 487 ~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL 538 (541)
. ...+.+=+++..-.+++.|+.|.++|
T Consensus 403 -------~------------------~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 403 -------Y------------------PDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp -------G------------------G-SSEEEEE--TT--HHHHHHHHH--
T ss_pred -------c------------------cCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 0 12346778887667788888887765
No 369
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.16 E-value=6.6e-09 Score=112.04 Aligned_cols=211 Identities=16% Similarity=0.192 Sum_probs=124.0
Q ss_pred hHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHh-ccCC-CEEEEc-CCCCcchHHHHHh-hcccCCc------EEEE
Q 009172 211 TTVVVEEKMSALEG-AESTVIMASGMSASTVMLLAL-VPAG-GHIVTT-TDCYRKTRIFIET-VLPKMGI------TATV 279 (541)
Q Consensus 211 ~~~~Le~~LA~l~g-~~~~i~~sSG~~Ai~~al~al-l~~G-D~VIv~-~~~y~~~~~~~~~-~l~~~Gi------~v~~ 279 (541)
...+|.++|+++.. .+.+++++||++|+..+++.. .-.| .+|+.. ...|++....+.. .....+. .+..
T Consensus 89 ~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~ 168 (431)
T PRK06209 89 IELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVT 168 (431)
T ss_pred HHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccc
Confidence 33467888988875 367888999999999998732 1134 355554 3334331111100 0000111 1233
Q ss_pred eCCCCHHHHHHhccC--CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc------cccccCCcEE
Q 009172 280 IDPADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ------KALSLGADLV 351 (541)
Q Consensus 280 vd~~dle~Le~ai~~--~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~------~~l~~gaDiv 351 (541)
++..|+++++++++. +++.+|++|......+..-.+++|.++|++||+++|+||++. ++.. .......|++
T Consensus 169 ~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t-G~~~~~~g~~~~~gv~PDi~ 247 (431)
T PRK06209 169 FRYNDIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMIT-GFRWHMRGAQKLYGIVPDLS 247 (431)
T ss_pred cCCCCHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-cCCcCcchhhHHhCCCccee
Confidence 456689999988852 247899998876432222338899999999999999999863 2211 1122235664
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHH--HHHH--hh--hcCCCc--cHHHHHHHHHhHHHHHH--HHHHHHHHHHHHH
Q 009172 352 LHSATKFIGGHNDVLAGSISGSGKLVTQ--IRNL--HH--VLGGAL--NPNAAYLIIRGMKTLHL--RVQQQNSTALRMA 421 (541)
Q Consensus 352 v~S~sK~lgg~g~v~gG~vv~~~~li~~--l~~~--~~--~~g~~~--s~~~a~l~l~~l~tl~~--r~~~~~~na~~la 421 (541)
+ ++|.++++ ..+|++++++++.+. +... .. .++.+. +|..+..++..++.+.. ..++..+...++.
T Consensus 248 t--~gK~lggG--~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~ 323 (431)
T PRK06209 248 C--FGKALGNG--FAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLA 323 (431)
T ss_pred e--ehhhhcCC--cccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 4 89999974 347888888887765 2111 11 133333 45666666666666532 2334444455555
Q ss_pred HHHHh
Q 009172 422 EILEA 426 (541)
Q Consensus 422 ~~L~~ 426 (541)
+.|++
T Consensus 324 ~~L~~ 328 (431)
T PRK06209 324 AGVNE 328 (431)
T ss_pred HHHHH
Confidence 55543
No 370
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.14 E-value=1.6e-09 Score=110.43 Aligned_cols=184 Identities=17% Similarity=0.163 Sum_probs=136.8
Q ss_pred hHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHH
Q 009172 211 TTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEA 290 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ 290 (541)
.+-.||+.||+++|.++.++.+-|-+++..++.++.+.||.|.+.+....+.... ++...-++.++.++|.++++.
T Consensus 140 vHldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~G----lqlSRS~i~~Fkhndm~~ler 215 (467)
T KOG1358|consen 140 VHLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKG----LQLSRSTISYFKHNDMEDLER 215 (467)
T ss_pred eecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCcEEEEehhhhHHHHHH----HhhhhheeEEecCCCHHHHHH
Confidence 4668999999999999999999999999999999999999999988776664433 333344677888899999987
Q ss_pred hccCCC------------eeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCccc----------ccccCC
Q 009172 291 ALNNNN------------VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQK----------ALSLGA 348 (541)
Q Consensus 291 ai~~~~------------tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~----------~l~~ga 348 (541)
.+.+.. -+.|++|...-++|.++|+.+|.++..+|...+++|+++..+...+ ...-.+
T Consensus 216 ll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~i 295 (467)
T KOG1358|consen 216 LLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDI 295 (467)
T ss_pred hccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccce
Confidence 764321 3578889999999999999999999999999999999976554322 111246
Q ss_pred cEEEECCccccCCCCCceEEEEEeChHHH--HHHHHHhhhcCCCccHHHHHHHHHh
Q 009172 349 DLVLHSATKFIGGHNDVLAGSISGSGKLV--TQIRNLHHVLGGALNPNAAYLIIRG 402 (541)
Q Consensus 349 Divv~S~sK~lgg~g~v~gG~vv~~~~li--~~l~~~~~~~g~~~s~~~a~l~l~~ 402 (541)
|+++.|+.-.++.. ||+++|+.-++ ++|......+...+.|..+-.+...
T Consensus 296 Div~~sm~~alas~----GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~a 347 (467)
T KOG1358|consen 296 DIVTASMETALASG----GGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKA 347 (467)
T ss_pred eeeeeccccccccc----CceeecceeeEeeeeccccceeeeccCchhhhhhHHHH
Confidence 89999999888865 47888854332 3343333344455555554444333
No 371
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.03 E-value=1.1e-07 Score=99.61 Aligned_cols=241 Identities=12% Similarity=0.033 Sum_probs=145.3
Q ss_pred hHHHHHHHHHHHhCCC---cEEEeC-CHHHHHHHHHHHhccCCCEEE-EcCCCCcchHHHHHhhcccCCcEEEEeC----
Q 009172 211 TTVVVEEKMSALEGAE---STVIMA-SGMSASTVMLLALVPAGGHIV-TTTDCYRKTRIFIETVLPKMGITATVID---- 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~---~~i~~s-SG~~Ai~~al~all~~GD~VI-v~~~~y~~~~~~~~~~l~~~Gi~v~~vd---- 281 (541)
...+.++.|.++++.+ ++++++ ||+.++.++...++.+||+++ +....+.+.. +. ..++++| ++..+.
T Consensus 50 i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r-~~-~ea~~~g-~v~~~~~~~~ 126 (364)
T PRK12462 50 LLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRK-AI-GEASRVA-AMRVVWDGAA 126 (364)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHH-HH-HHHHhcC-CceEecCcCC
Confidence 4567788888899862 355554 467899999999999999654 3333443422 22 4455565 343332
Q ss_pred -----CCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEEEECC
Q 009172 282 -----PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSA 355 (541)
Q Consensus 282 -----~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDivv~S~ 355 (541)
..+++.+ .+.+ +.+.|++++-...+|...| ++.+.+++++|+|.+-..+ .+.+..++ |+++.+.
T Consensus 127 ~~~~~~p~~~~~--~~~~-d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~--dvi~ags 196 (364)
T PRK12462 127 SGYRTLPSLAEL--DWDA-RAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAY--GMVYAHA 196 (364)
T ss_pred CCCCcCCCHHHh--ccCC-CCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHHc--cEEEeec
Confidence 1134444 2333 3677777554455788876 3333468999999984332 22333344 9999999
Q ss_pred ccccCCCCCceEEEEEeChHHHHHHHHHh------------hhcCCCccHHHHHHHHHhHHHH-------HHHHHHHHHH
Q 009172 356 TKFIGGHNDVLAGSISGSGKLVTQIRNLH------------HVLGGALNPNAAYLIIRGMKTL-------HLRVQQQNST 416 (541)
Q Consensus 356 sK~lgg~g~v~gG~vv~~~~li~~l~~~~------------~~~g~~~s~~~a~l~l~~l~tl-------~~r~~~~~~n 416 (541)
.|.+|++| .++++.+++++++..... ...-.+++.+..|++...++.+ +.+.+++.+.
T Consensus 197 QKnlgP~G---ltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~k 273 (364)
T PRK12462 197 QKNLGPAG---VTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARK 273 (364)
T ss_pred cccCCCCc---eEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999776 568888888776543210 0112344555555555454443 3456777788
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCce
Q 009172 417 ALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI 481 (541)
Q Consensus 417 a~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~i 481 (541)
++.+.+++++.+.. |... ..+.+ + .--.+.|.+++ .+...+|++..+..|+
T Consensus 274 a~~ly~~id~~~~~----~~~~-~~~~~---R-----S~mnv~f~~~~-~~l~~~f~~~a~~~gl 324 (364)
T PRK12462 274 AAMLYATLDALNEV----IDCH-AHRAA---R-----STMNVAFRFRQ-PRLDTLFKEQSTEAGF 324 (364)
T ss_pred HHHHHHHHHhCCCc----ccCC-CChhh---c-----CcceEEEEcCC-HHHHHHHHHHHHHCCC
Confidence 89999999887632 2211 11111 1 11247788764 4567788888876664
No 372
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.02 E-value=5.9e-08 Score=100.03 Aligned_cols=222 Identities=18% Similarity=0.197 Sum_probs=143.8
Q ss_pred CCCCCCCCchhHHHHHHHHHHHh---CCCcEEEeCCHHHHHHHHHHHhcc------CCC--EEEEcCCCCcc-hHHHHHh
Q 009172 201 SFEYGRYGNPTTVVVEEKMSALE---GAESTVIMASGMSASTVMLLALVP------AGG--HIVTTTDCYRK-TRIFIET 268 (541)
Q Consensus 201 ~~~Y~R~~~p~~~~Le~~LA~l~---g~~~~i~~sSG~~Ai~~al~all~------~GD--~VIv~~~~y~~-~~~~~~~ 268 (541)
+|..+-+-+-....+++.|.+.. ..+.+.+..||++|+..+|..-.+ +-+ .+|.-..+|++ +...+..
T Consensus 89 ~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~ 168 (433)
T KOG1401|consen 89 GHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSV 168 (433)
T ss_pred eeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHh
Confidence 34444443333667888888887 457889999999999998864322 112 38888888877 3333321
Q ss_pred -hcccCCc-------EEEEeCCCCHHHHHHhccCCC--eeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcC
Q 009172 269 -VLPKMGI-------TATVIDPADMEGLEAALNNNN--VSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 269 -~l~~~Gi-------~v~~vd~~dle~Le~ai~~~~--tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea 334 (541)
.-..++. ++......|..++++.++.++ +.+|++|......|.++. +..|.++|+++|+++|.||+
T Consensus 169 ~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV 248 (433)
T KOG1401|consen 169 TGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEV 248 (433)
T ss_pred hcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehh
Confidence 1122232 344445568999999997653 789999999877776654 66899999999999999999
Q ss_pred CCCCC------cccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHhh-hcCCC--ccHHHHHHHHHhHHH
Q 009172 335 FATPL------NQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHH-VLGGA--LNPNAAYLIIRGMKT 405 (541)
Q Consensus 335 ~a~~~------~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~~-~~g~~--~s~~~a~l~l~~l~t 405 (541)
+.... .+..+..-.||.+ +.|.++|+ +..|+..+++++.+.+..-.. .+|.+ -+|+.+..+...|++
T Consensus 249 ~tG~gR~g~~~a~e~~~~~PDI~t--~aK~L~gG--lPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~ 324 (433)
T KOG1401|consen 249 QTGLGRLGYGWAQEYFGVTPDITT--VAKPLGGG--LPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDE 324 (433)
T ss_pred hhCccccchHHHHHHhCcCCccee--ehhhccCC--ceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHH
Confidence 75421 1233333456665 89999976 567888899888888764222 23433 356777777777766
Q ss_pred HH--HHHHHHHHHHHHHHHHHHh
Q 009172 406 LH--LRVQQQNSTALRMAEILEA 426 (541)
Q Consensus 406 l~--~r~~~~~~na~~la~~L~~ 426 (541)
+. ...++..+.-+.|.+.|.+
T Consensus 325 l~~~e~~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 325 LKDPETLKNVSKIGKELRKLLDE 347 (433)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHH
Confidence 53 2233344444444444443
No 373
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.94 E-value=2.9e-06 Score=94.53 Aligned_cols=171 Identities=11% Similarity=0.026 Sum_probs=109.8
Q ss_pred EEEEcCCCCcchHHHHHhhcccCCc---EEEEeCC-----CCHHHHHHhccC----C-CeeEEEEeCCCCCCCcccCHHH
Q 009172 251 HIVTTTDCYRKTRIFIETVLPKMGI---TATVIDP-----ADMEGLEAALNN----N-NVSLFFTESPTNPFLRCVDVKL 317 (541)
Q Consensus 251 ~VIv~~~~y~~~~~~~~~~l~~~Gi---~v~~vd~-----~dle~Le~ai~~----~-~tklV~lesp~NPtG~v~di~~ 317 (541)
.++++...|.+.... +..+|+ .++.++. .|+++|+++|++ . .+-+|+....+..+|.+-|+++
T Consensus 224 ~vl~s~~aHyS~~KA----a~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~e 299 (608)
T TIGR03811 224 KWLVPQTKHYSWLKA----ADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDK 299 (608)
T ss_pred EEEECCCccHHHHHH----HHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHH
Confidence 477777778775543 333444 2444442 378888888752 1 2445666677788999999999
Q ss_pred HHHHH---HhCCC--EEEEEcCCCCCC---ccc------c----------------------------c--ccCCcEEEE
Q 009172 318 VSDLC---HKKGA--IVCIDGTFATPL---NQK------A----------------------------L--SLGADLVLH 353 (541)
Q Consensus 318 Ia~la---~~~gi--llvvDea~a~~~---~~~------~----------------------------l--~~gaDivv~ 353 (541)
|+++| +++|+ +++||.+|+... ..+ | + -..+|-++.
T Consensus 300 I~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItv 379 (608)
T TIGR03811 300 IVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTI 379 (608)
T ss_pred HHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEe
Confidence 99999 66887 699999988642 111 0 0 025889999
Q ss_pred CCccccCCCCCceEEE-EEeChHHHHHHHH---Hhh--------------hcCCCcc--HHHHHHHHHhH----HHHHHH
Q 009172 354 SATKFIGGHNDVLAGS-ISGSGKLVTQIRN---LHH--------------VLGGALN--PNAAYLIIRGM----KTLHLR 409 (541)
Q Consensus 354 S~sK~lgg~g~v~gG~-vv~~~~li~~l~~---~~~--------------~~g~~~s--~~~a~l~l~~l----~tl~~r 409 (541)
.+||++.-+-+ .|+ ++.++.+.+.+.. +.. ..|...+ ....|+.++.+ +.+...
T Consensus 380 DpHK~g~~Py~--~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~ 457 (608)
T TIGR03811 380 DPHKMGYIPYS--AGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKL 457 (608)
T ss_pred CcccccccCCC--eEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHH
Confidence 99999876642 454 4455554443321 110 1122222 35566666544 457777
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 009172 410 VQQQNSTALRMAEILEAH 427 (541)
Q Consensus 410 ~~~~~~na~~la~~L~~~ 427 (541)
+.+..++++++++.|+++
T Consensus 458 i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 458 IGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 888889999999999884
No 374
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.94 E-value=2.1e-07 Score=94.45 Aligned_cols=256 Identities=19% Similarity=0.172 Sum_probs=153.8
Q ss_pred CCCCCCCC--CchhHHHHHHHH----HHHhCCC---c--EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHH-HH
Q 009172 200 ASFEYGRY--GNPTTVVVEEKM----SALEGAE---S--TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIF-IE 267 (541)
Q Consensus 200 ~~~~Y~R~--~~p~~~~Le~~L----A~l~g~~---~--~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~-~~ 267 (541)
.+|-=.|| +|...+++|... -+.++.+ . .+-.-||+-|+..+..++++|+|+|.--+.-+++.... +.
T Consensus 70 EGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~ 149 (477)
T KOG2467|consen 70 EGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQ 149 (477)
T ss_pred cCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccc
Confidence 34544554 577666654322 2344542 2 34456999999999999999999998777666653211 00
Q ss_pred hhcccCCcEEEEe-------CC----CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCC
Q 009172 268 TVLPKMGITATVI-------DP----ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 268 ~~l~~~Gi~v~~v-------d~----~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a 336 (541)
.--++.-..-+++ ++ .|-|.||+....-++|+|+.-. +-.-+..|.+++.++|.+.|++++.|-++.
T Consensus 150 T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~--SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHI 227 (477)
T KOG2467|consen 150 TPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGT--SAYSRLIDYARFRKIADKVGAYLMADMAHI 227 (477)
T ss_pred cCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEecc--ccchhhccHHHHHHHHHhcCceeehhhhhH
Confidence 0011111112222 21 2778888765544678887632 335678899999999999999999999865
Q ss_pred C-----CCcccccccCCcEEEECCccccCCCCCceEEEEEeCh---------------HHHHHHHHH--hhhcCCCccHH
Q 009172 337 T-----PLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSG---------------KLVTQIRNL--HHVLGGALNPN 394 (541)
Q Consensus 337 ~-----~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~---------------~li~~l~~~--~~~~g~~~s~~ 394 (541)
+ +...+|+++ +|||..+.||.+-|+. ||++.-++ ++-+++... ....|+.-+-.
T Consensus 228 SgLVAA~vipsPFey-~DiVTTTTHKsLRGPR---g~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNht 303 (477)
T KOG2467|consen 228 SGLVAAGVIPSPFEY-CDIVTTTTHKSLRGPR---GAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHT 303 (477)
T ss_pred HHHHhcccCCCcccc-cceeeccccccccCCc---ceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcch
Confidence 4 344577887 9999999999999885 77776432 233344321 11222221111
Q ss_pred HH--HHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcC---CHH
Q 009172 395 AA--YLIIRGM--KTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDG---DLT 467 (541)
Q Consensus 395 ~a--~l~l~~l--~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g---~~~ 467 (541)
.+ +.++... ..+....++..+|++.+++.|.++.. ++.--|-.. .++-++|.. +..
T Consensus 304 IaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy--~lvtgGTDn---------------HlvLvDLr~~G~dGa 366 (477)
T KOG2467|consen 304 IAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRGY--KLVTGGTDN---------------HLVLVDLRPKGVDGA 366 (477)
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcCc--eEecCCccc---------------eEEEEeccccCCchH
Confidence 11 1122222 23555667788999999999987532 111222222 367777753 235
Q ss_pred HHHHHHHHcCC
Q 009172 468 ATIKFIDALKI 478 (541)
Q Consensus 468 ~~~~~l~~L~~ 478 (541)
.++++++.+.+
T Consensus 367 rvE~vle~~~I 377 (477)
T KOG2467|consen 367 RVEKVLELCHI 377 (477)
T ss_pred HHHHHHHHhhh
Confidence 67788876643
No 375
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.92 E-value=4.1e-07 Score=104.32 Aligned_cols=157 Identities=16% Similarity=0.208 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHhCCC--cEEEeCCHH---HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHH
Q 009172 212 TVVVEEKMSALEGAE--STVIMASGM---SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADME 286 (541)
Q Consensus 212 ~~~Le~~LA~l~g~~--~~i~~sSG~---~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle 286 (541)
.-+++..+++|.|.+ .+=+.-.++ ||+.++.+..-....+|++++..|+.+...++..+...|++++. +
T Consensus 126 l~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~ 199 (954)
T PRK12566 126 LLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------D 199 (954)
T ss_pred HHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------c
Confidence 445688999999975 444555555 34444333211224689999999999999888888889999875 3
Q ss_pred HHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcC-CCCCCcccccccCCcEEEECCc-----cccC
Q 009172 287 GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT-FATPLNQKALSLGADLVLHSAT-----KFIG 360 (541)
Q Consensus 287 ~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea-~a~~~~~~~l~~gaDivv~S~s-----K~lg 360 (541)
++++.+++ ++..|++.+|+ -.|.+.|+++|.+++|++|+++++-.- .+-.+...|-++|+||++.+.. =.||
T Consensus 200 ~~~~~~~~-~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~~~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~G 277 (954)
T PRK12566 200 AVDNLAAH-AVFGALLQYPD-THGEIRDLRPLIDQLHGQQALACVAADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYG 277 (954)
T ss_pred chhhcCCC-CEEEEEEECCC-CceEEccHHHHHHHHHHcCCEEEEEeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCC
Confidence 34455655 48999999997 689999999999999999998664321 2223456788999999988643 2344
Q ss_pred CCCCceEEEEEeChHHHHH
Q 009172 361 GHNDVLAGSISGSGKLVTQ 379 (541)
Q Consensus 361 g~g~v~gG~vv~~~~li~~ 379 (541)
|+. +|++..++++..+
T Consensus 278 GP~---ag~~a~~~~~~R~ 293 (954)
T PRK12566 278 GPH---AAYFACRDDYKRA 293 (954)
T ss_pred CCC---eeeeeehHHHHhh
Confidence 443 7888887766544
No 376
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.86 E-value=2.1e-06 Score=88.36 Aligned_cols=249 Identities=16% Similarity=0.142 Sum_probs=146.8
Q ss_pred hhHHHHHHHHHHHh-CCC---------cEEEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcccCCcEE
Q 009172 210 PTTVVVEEKMSALE-GAE---------STVIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMGITA 277 (541)
Q Consensus 210 p~~~~Le~~LA~l~-g~~---------~~i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v 277 (541)
.....+.+.++++. |.+ ..+-+.+|+.|+..+..-+ ..+...|-+++|+|+..... +...|.++
T Consensus 69 ~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~I----f~~aGl~v 144 (396)
T COG1448 69 EGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAI----FEAAGLEV 144 (396)
T ss_pred CCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHH----HHhcCCce
Confidence 34556777777764 432 2456678898888776543 45667799999999886644 44457766
Q ss_pred EEeC---C----CCHHHHHHhccCC-CeeEEEE-eCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCC---CCCccc
Q 009172 278 TVID---P----ADMEGLEAALNNN-NVSLFFT-ESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFA---TPLNQK 342 (541)
Q Consensus 278 ~~vd---~----~dle~Le~ai~~~-~tklV~l-esp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a---~~~~~~ 342 (541)
...+ . .|.+.+.+.|+.- +..+|++ ...|||||.-+. .++|.++.++.|.+.++|-+|- .++..+
T Consensus 145 ~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeD 224 (396)
T COG1448 145 ETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEED 224 (396)
T ss_pred eeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHH
Confidence 5543 2 2666666655421 1235555 345799998776 5588888999999999999953 343322
Q ss_pred cc------ccCC-cEEEECCccccCCCCCceEEEEEe--ChHHHHHH----HHHhhhcCCCccHHHHHHHH---------
Q 009172 343 AL------SLGA-DLVLHSATKFIGGHNDVLAGSISG--SGKLVTQI----RNLHHVLGGALNPNAAYLII--------- 400 (541)
Q Consensus 343 ~l------~~ga-Divv~S~sK~lgg~g~v~gG~vv~--~~~li~~l----~~~~~~~g~~~s~~~a~l~l--------- 400 (541)
.. ..+. -+|+.|+||.||--|.++|++.+. +.+..+++ +...+..-+.++...+.++.
T Consensus 225 a~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lr 304 (396)
T COG1448 225 AYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELR 304 (396)
T ss_pred HHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHH
Confidence 21 1222 478999999999888877775543 34444443 33333222222222222221
Q ss_pred -HhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCC
Q 009172 401 -RGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKI 478 (541)
Q Consensus 401 -~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~ 478 (541)
...+.+....+++.+.+..+.+.|+.+..-... +.. ...-|||++. .-..+++.++.+...+
T Consensus 305 a~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f-----------~~i----~~Q~GMFsy~-Gls~~QV~rLree~~I 367 (396)
T COG1448 305 AEWEQELEEMRQRILEMRQALVDALKALGAPRNF-----------DFI----ISQRGMFSYT-GLSPEQVDRLREEFGI 367 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccc-----------chH----hhcCceeecC-CCCHHHHHHHHHhccE
Confidence 223345555666777778888888763211001 111 1134687775 1145677777666543
No 377
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.82 E-value=2.6e-07 Score=95.92 Aligned_cols=145 Identities=15% Similarity=0.221 Sum_probs=108.0
Q ss_pred hHHHHHHHHHHHhCCCcEEE-eCCHHHHHHH---HHHHhc-cCC----CEEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 211 TTVVVEEKMSALEGAESTVI-MASGMSASTV---MLLALV-PAG----GHIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~~~i~-~sSG~~Ai~~---al~all-~~G----D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+|+++|.++.|-+.+-+ -.+|+++=.+ ++++.- ..| +.+|+++..|+.... .+...|.+|+.|+
T Consensus 110 li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA----SAam~G~~VV~V~ 185 (496)
T COG1003 110 LIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA----SAAMAGFKVVVVK 185 (496)
T ss_pred HHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh----hHhhcCceEEEEe
Confidence 56678999999999876544 4567654333 334332 223 589999999988652 3445588888887
Q ss_pred CC-----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC--CcccccccCCcEEEEC
Q 009172 282 PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP--LNQKALSLGADLVLHS 354 (541)
Q Consensus 282 ~~-----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~--~~~~~l~~gaDivv~S 354 (541)
.+ |+++|++++.+ ++.++.+.+||.-.-.-.+|.+|+++.|++|..|..|.+-.-. -..+|-++|.|++=.-
T Consensus 186 ~~~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlN 264 (496)
T COG1003 186 CDENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLN 264 (496)
T ss_pred cCCCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEee
Confidence 53 89999999986 5999999888833333357999999999999999999983221 1357889999999999
Q ss_pred CccccC
Q 009172 355 ATKFIG 360 (541)
Q Consensus 355 ~sK~lg 360 (541)
+||.|+
T Consensus 265 LHKTF~ 270 (496)
T COG1003 265 LHKTFC 270 (496)
T ss_pred cccccc
Confidence 999987
No 378
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.68 E-value=6.3e-07 Score=91.17 Aligned_cols=282 Identities=14% Similarity=0.150 Sum_probs=136.7
Q ss_pred hHHHHHHHHHHHh---C-C---CcEEEeCCHH-HHHHHHHHHhccC--C----CEEEEcCCCCcchHHHHHhhcccCCcE
Q 009172 211 TTVVVEEKMSALE---G-A---ESTVIMASGM-SASTVMLLALVPA--G----GHIVTTTDCYRKTRIFIETVLPKMGIT 276 (541)
Q Consensus 211 ~~~~Le~~LA~l~---g-~---~~~i~~sSG~-~Ai~~al~all~~--G----D~VIv~~~~y~~~~~~~~~~l~~~Gi~ 276 (541)
...+|++.|.+|+ | + ..-|++++|+ +-+++++.+|... . -.|+...|-|...... ...++....+
T Consensus 44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~q-t~~f~s~~y~ 122 (363)
T PF04864_consen 44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQ-TDFFDSRLYK 122 (363)
T ss_dssp S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHH-CCCT-BTTEE
T ss_pred ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHH-HHhccccCcc
Confidence 4456777777665 3 2 3578888887 7788888887433 1 3788888888765432 2334332222
Q ss_pred EEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcc-cccccCCcEEEECC
Q 009172 277 ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQ-KALSLGADLVLHSA 355 (541)
Q Consensus 277 v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~-~~l~~gaDivv~S~ 355 (541)
..- |... +.+.-+. .+-+=++++||||.|.+-. .+.+.-+..+|.|=+|-=|... -+....-||.++++
T Consensus 123 w~G-da~~---~~~~~~~-~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPhyTpI~~~aD~DiMLFT~ 192 (363)
T PF04864_consen 123 WAG-DASN---FKNSDNP-SPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPHYTPITAPADHDIMLFTL 192 (363)
T ss_dssp EEE-ECCC---GTT-S-C-CGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S-B--SEEEEEH
T ss_pred ccc-cHHh---hccCCCC-CCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeecccccccCCCCCCceEEEEE
Confidence 211 1111 1111011 2445577899999998632 1235556778999996533221 11234568999999
Q ss_pred ccccCCCCCceEEEEE-eChHHHHHHHHHhhhcCCCccHHHHHHHHHhHHHHHH--------------HHHHHHHHHHHH
Q 009172 356 TKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHL--------------RVQQQNSTALRM 420 (541)
Q Consensus 356 sK~lgg~g~v~gG~vv-~~~~li~~l~~~~~~~g~~~s~~~a~l~l~~l~tl~~--------------r~~~~~~na~~l 420 (541)
||.-| |.+...||.+ -++++.+++..+........+-....-+++-|+.+-. -.+...+..++|
T Consensus 193 SK~TG-HAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L 271 (363)
T PF04864_consen 193 SKLTG-HAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKL 271 (363)
T ss_dssp HHHCS--GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHH
T ss_pred ecccC-ccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHH
Confidence 99875 4444455555 4556778887765544433443332222222222111 112233445566
Q ss_pred HHHHHhCCCceEEeCCCCCCCchhhh-HhhhcCCcccEEEEEEcCC-HHHHHHHHHHcCCCceeecCCCcccceecCccc
Q 009172 421 AEILEAHPKVKRVHYPGLKSHPEHHI-ATQQMTGFGGVVSFEVDGD-LTATIKFIDALKIPYIAPSFGGCESIVDQPAIM 498 (541)
Q Consensus 421 a~~L~~~p~v~~V~~Pgl~s~p~~~l-~~~~~~g~g~~vsf~l~g~-~~~~~~~l~~L~~~~iavS~G~~~sl~~~pa~~ 498 (541)
.+.+.+-. +..+|.+ .|+|.- .++.....+.+-|+..+.. .+++..++.+.++++ .-|.
T Consensus 272 ~~~~~~S~---rFSLq~~--~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~I~t---r~G~----------- 332 (363)
T PF04864_consen 272 RAAVSASK---RFSLQKF--SPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAKIIT---RSGV----------- 332 (363)
T ss_dssp HHHHCCSS---SEEE-----SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTTEEE---EEGG-----------
T ss_pred HHHHHhcC---ceecCcC--CchhccccccccCCCCCeEEEecCCcccccHHHHHHhCCccc---CCCC-----------
Confidence 66665432 2344443 234432 2333345677889998743 357888887665543 2221
Q ss_pred ccccCCHHHHHhcCCCCCeEEEEecCC--CHHHHHHHH
Q 009172 499 SYWDLSQSERLKYGIMDNLVRFSFGVE--DFEDLKADV 534 (541)
Q Consensus 499 ~~~~~~~~~~~~~gi~~~~IRlSvG~E--d~edli~dL 534 (541)
..|.+..+||||+-.. +.+.+++.|
T Consensus 333 -----------~fga~~ryVRlSml~~~d~Fd~l~~rL 359 (363)
T PF04864_consen 333 -----------LFGADSRYVRLSMLKRDDDFDQLLERL 359 (363)
T ss_dssp -----------GGTS-TTEEEEESSS-HHHHHHHHHHH
T ss_pred -----------ccCCCCCeEEEeccCCHHHHHHHHHHH
Confidence 2456788999998642 234444444
No 379
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.51 E-value=1.7e-05 Score=83.22 Aligned_cols=266 Identities=15% Similarity=0.231 Sum_probs=156.8
Q ss_pred HHHHhcccCCCCCCCCCchhHHHHHHHHHHH----hCC-----------CcEEEeCCHHHHHHHHHHHh-------ccCC
Q 009172 192 IDFKEKRRASFEYGRYGNPTTVVVEEKMSAL----EGA-----------ESTVIMASGMSASTVMLLAL-------VPAG 249 (541)
Q Consensus 192 ~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l----~g~-----------~~~i~~sSG~~Ai~~al~al-------l~~G 249 (541)
.+...+..+...++....|...+||..+-++ ++- ...++.+|.+++...++.+. ++.+
T Consensus 91 admLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~ 170 (511)
T KOG0628|consen 91 ADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSR 170 (511)
T ss_pred HHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcC
Confidence 3444444556678888999999998555444 332 23688889988877766542 2222
Q ss_pred -----------C-EEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC-----CHHHHHHhccCC----CeeEEEEeCCCCC
Q 009172 250 -----------G-HIVTTTDCYRKTRIFIETVLPKMGITATVIDPA-----DMEGLEAALNNN----NVSLFFTESPTNP 308 (541)
Q Consensus 250 -----------D-~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~-----dle~Le~ai~~~----~tklV~lesp~NP 308 (541)
+ .+.+++..|.+.. ...-..|++.+.+..+ +.+.|+++|.++ -+-.+++.+.. -
T Consensus 171 ~p~~~e~~~~~~lV~Y~SDqahssve----ka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G-T 245 (511)
T KOG0628|consen 171 PPELHESSVLARLVAYCSDQAHSSVE----KACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLG-T 245 (511)
T ss_pred CCcccchhhhhhheEEecCcccchHH----HhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeec-C
Confidence 1 2445566666543 2223336666666543 577788777643 13344443433 2
Q ss_pred CCcc--cCHHHHHHHHHhCCCEEEEEcCCCCCCc----ccccccC---CcEEEECCccccCCCCCceEEEEE--------
Q 009172 309 FLRC--VDVKLVSDLCHKKGAIVCIDGTFATPLN----QKALSLG---ADLVLHSATKFIGGHNDVLAGSIS-------- 371 (541)
Q Consensus 309 tG~v--~di~~Ia~la~~~gillvvDea~a~~~~----~~~l~~g---aDivv~S~sK~lgg~g~v~gG~vv-------- 371 (541)
|+.+ -++.+|..+|+++|++|+||++|++... ++.+-.| +|-+-+-.||++--+-|.-.=|+-
T Consensus 246 T~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~ 325 (511)
T KOG0628|consen 246 TSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRA 325 (511)
T ss_pred ccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeee
Confidence 3433 4699999999999999999999986433 2222223 466666778887655443221221
Q ss_pred --eChHHHHH--------HHHHhhhcCCCccHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCC
Q 009172 372 --GSGKLVTQ--------IRNLHHVLGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLK 439 (541)
Q Consensus 372 --~~~~li~~--------l~~~~~~~g~~~s~~~a~l~l~--~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~ 439 (541)
.++..++. .+.++-..|-..-.+-.|..+| |.+.++.+++++.+.++.+.+.+.+.+..+-+.-.
T Consensus 326 ~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~--- 402 (511)
T KOG0628|consen 326 FNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKR--- 402 (511)
T ss_pred eecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccc---
Confidence 11111110 1111112222233345565554 55778888888888888777777765554322211
Q ss_pred CCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCC
Q 009172 440 SHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIP 479 (541)
Q Consensus 440 s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~ 479 (541)
.=+++.|.+++..+..++|++++..-
T Consensus 403 --------------~lgLvcFRlk~~N~~ne~Ll~~in~~ 428 (511)
T KOG0628|consen 403 --------------ILGLVCFRLKGDNEINEALLNRLNSS 428 (511)
T ss_pred --------------ccceeEEeecCCcHHHHHHHHHHHhc
Confidence 23589999998767788899888643
No 380
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.41 E-value=1.6e-06 Score=88.96 Aligned_cols=165 Identities=16% Similarity=0.249 Sum_probs=105.9
Q ss_pred CCCCCCc-hhHHHHHHHHHHHh----CC---CcEEEeCCHH-HHHHHHHHHhc-cCCCEEEEcCCCCcchHHHHHhhccc
Q 009172 203 EYGRYGN-PTTVVVEEKMSALE----GA---ESTVIMASGM-SASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETVLPK 272 (541)
Q Consensus 203 ~Y~R~~~-p~~~~Le~~LA~l~----g~---~~~i~~sSG~-~Ai~~al~all-~~GD~VIv~~~~y~~~~~~~~~~l~~ 272 (541)
..|-|.+ ..+.-+|+.+|++. |- .+-|+.|+|. .|+..++..++ .+.+-|+++-|-|+-+...+ ..
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti----~l 180 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATI----SL 180 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHH----HH
Confidence 3444433 45666777777765 31 1346666665 88888887664 56789999999887644333 22
Q ss_pred CCc-EEEE-eCC-----CCHHHHHHhccC----CCeeEEEEeCCCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCC
Q 009172 273 MGI-TATV-IDP-----ADMEGLEAALNN----NNVSLFFTESPTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATP 338 (541)
Q Consensus 273 ~Gi-~v~~-vd~-----~dle~Le~ai~~----~~tklV~lesp~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~ 338 (541)
+|. .|.+ +|. .|.++|++.+++ -+++++++-+|.||||.++. +++|.++|+++|+.|+.||+|-.-
T Consensus 181 ~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~N 260 (475)
T KOG0258|consen 181 LGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDN 260 (475)
T ss_pred hCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhh
Confidence 222 2222 231 367777766543 24777777799999999985 889999999999999999995432
Q ss_pred Cccc---------c-cccC---C----cEEEECCccccCCCCCceEEEEE
Q 009172 339 LNQK---------A-LSLG---A----DLVLHSATKFIGGHNDVLAGSIS 371 (541)
Q Consensus 339 ~~~~---------~-l~~g---a----Divv~S~sK~lgg~g~v~gG~vv 371 (541)
+... . .++| . -+..+|.||.+.|--...||++=
T Consensus 261 vy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmE 310 (475)
T KOG0258|consen 261 VYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYME 310 (475)
T ss_pred ccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeee
Confidence 2111 0 1122 2 15678899988765445678763
No 381
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.38 E-value=1.4e-05 Score=83.91 Aligned_cols=216 Identities=16% Similarity=0.144 Sum_probs=132.0
Q ss_pred hhHHHHHH----HHHHHhCCCcE---EEeCCHHHHHHHHHHHh---cc--CC---CEEEEcCCCCcchHHHHHhhcccCC
Q 009172 210 PTTVVVEE----KMSALEGAEST---VIMASGMSASTVMLLAL---VP--AG---GHIVTTTDCYRKTRIFIETVLPKMG 274 (541)
Q Consensus 210 p~~~~Le~----~LA~l~g~~~~---i~~sSG~~Ai~~al~al---l~--~G---D~VIv~~~~y~~~~~~~~~~l~~~G 274 (541)
|..+.++. .++.++++... ..|++|++++.++-... .+ .| -.++++...|. .++.....++
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~----a~eK~a~yf~ 191 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHA----AFEKAARYFE 191 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHH----HHHHHHhhEE
Confidence 55555544 45667776422 34556667755544321 11 12 23455444443 3445566677
Q ss_pred cEEEEeCCC------CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh-CCCEEEEEcCCCCCCc----ccc
Q 009172 275 ITATVIDPA------DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLN----QKA 343 (541)
Q Consensus 275 i~v~~vd~~------dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~-~gillvvDea~a~~~~----~~~ 343 (541)
++++.++.+ |+..+.+.++++ |.+|+.+.|+-|+|.+-|+++|.++.-+ +++++++|.+-+.++. ...
T Consensus 192 v~l~~V~~~~~~~~~D~~k~~~~i~eN-ti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~ 270 (491)
T KOG1383|consen 192 VELREVPLDEGDYRVDPGKVVRMIDEN-TIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE 270 (491)
T ss_pred EEEEeeeccccceEecHHHHHHHhccc-eEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence 777777543 899999999985 9999999999999999999999999988 9999999999665443 111
Q ss_pred --ccc---CCcEEEECCccccCCCCCceEEEEEeChHHH-HHHHHHhhhcC----------CCcc--HHHHHHHH--HhH
Q 009172 344 --LSL---GADLVLHSATKFIGGHNDVLAGSISGSGKLV-TQIRNLHHVLG----------GALN--PNAAYLII--RGM 403 (541)
Q Consensus 344 --l~~---gaDivv~S~sK~lgg~g~v~gG~vv~~~~li-~~l~~~~~~~g----------~~~s--~~~a~l~l--~~l 403 (541)
+.+ |+.-+..+.|||--.+.+ ++-+++.++++. +++.......| +..+ ...+|..+ -|-
T Consensus 271 ~~fdFr~p~V~Sisa~~HKYGl~~~G-~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~ 349 (491)
T KOG1383|consen 271 EEFDFRVPGVTSISADGHKYGLAPAG-SSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGE 349 (491)
T ss_pred cccccCCCCceeEeeccceeeeeecC-cEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhH
Confidence 222 333455678997443221 233444444433 22211111111 1111 23455443 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCce
Q 009172 404 KTLHLRVQQQNSTALRMAEILEAHPKVK 431 (541)
Q Consensus 404 ~tl~~r~~~~~~na~~la~~L~~~p~v~ 431 (541)
+.....+++..+++..|.+.+++.+.+.
T Consensus 350 eGY~~~~~~ive~~~~l~egie~i~~i~ 377 (491)
T KOG1383|consen 350 EGYRENTQNIVETARKLREGIENIKGIK 377 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccce
Confidence 5566778888899999999999866554
No 382
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.36 E-value=9.1e-06 Score=80.81 Aligned_cols=286 Identities=16% Similarity=0.193 Sum_probs=161.2
Q ss_pred HHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh---ccCCCEEEEcCCCCcchHHHHHhhc-----ccCCc---EEEEeCC
Q 009172 214 VVEEKMSALEGAESTVIMASGMSASTVMLLAL---VPAGGHIVTTTDCYRKTRIFIETVL-----PKMGI---TATVIDP 282 (541)
Q Consensus 214 ~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~al---l~~GD~VIv~~~~y~~~~~~~~~~l-----~~~Gi---~v~~vd~ 282 (541)
-.++..+.+-+-.-+++++||++|+.++|+.. .+-.| +|+-+..|++.....-++- +..++ +.+.+.+
T Consensus 91 cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAP 169 (452)
T KOG1403|consen 91 CARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAP 169 (452)
T ss_pred HHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCc-eEEEechhccceeeeeeccceeccCCCCcCCCceeEecC
Confidence 33444444445566899999999999998742 33334 5566677777432210110 00111 2222211
Q ss_pred ----------------CC-----HHHHHHhcc----C-CCeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEE
Q 009172 283 ----------------AD-----MEGLEAALN----N-NNVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 283 ----------------~d-----le~Le~ai~----~-~~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvD 332 (541)
.| .+.+++.++ . .++.+.+.|+..+-.|.++| .+++++..+.+|-+.|.|
T Consensus 170 cPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaD 249 (452)
T KOG1403|consen 170 CPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIAD 249 (452)
T ss_pred CccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEee
Confidence 01 123333332 1 13667777888887888887 568888899999999999
Q ss_pred cCCCCC-------CcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHH----HhhhcCCCccHHHHHHHHH
Q 009172 333 GTFATP-------LNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRN----LHHVLGGALNPNAAYLIIR 401 (541)
Q Consensus 333 ea~a~~-------~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~----~~~~~g~~~s~~~a~l~l~ 401 (541)
|++..+ +.+.....-.|||+ +.|-+|.+- ..+.++..+++.+.+.. +.+.+|+ +|..++..+.
T Consensus 250 EVQvGFGRvG~hyWafq~y~fiPDIVt--mgKpmGNGh--PVa~VattkeIA~Af~atgv~YFNTyGG--nPVsCAv~la 323 (452)
T KOG1403|consen 250 EVQVGFGRVGSHYWAFQTYNFIPDIVT--MGKPMGNGH--PVAAVATTKEIAQAFHATGVEYFNTYGG--NPVSCAVGLA 323 (452)
T ss_pred hhhhcccccchhhhhhhhhccccchhe--ecccCCCCC--eeeEEeccHHHHHHhccccceehhccCC--CchhHHHHHH
Confidence 995432 11222234457776 788777332 35778888888877654 3344554 5677777666
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCC-------HHHHHHHHH
Q 009172 402 GMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGD-------LTATIKFID 474 (541)
Q Consensus 402 ~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~-------~~~~~~~l~ 474 (541)
-|+.++ -+..+++++++.++|...-+-.+..++.+ -+.+|.|.++.++|-.+ ...+..++.
T Consensus 324 Vm~v~e--~E~Lq~ha~~vG~~L~~lL~~~k~kh~~I----------GDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~ 391 (452)
T KOG1403|consen 324 VMRVCE--DENLQEHAQQVGEKLEVLLRRLKQKHECI----------GDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVN 391 (452)
T ss_pred HHHHHh--hhhHHHHHHHHHHHHHHHHHHHhhhccce----------eccccceEEEeeeeecccccCCCcHHHHHHHHH
Confidence 666543 34556666666666654211001112211 12256788888887422 345666777
Q ss_pred HcCCCc-eeecCCCcccceecCcccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 009172 475 ALKIPY-IAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALH 539 (541)
Q Consensus 475 ~L~~~~-iavS~G~~~sl~~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG~Ed~edli~dL~~AL~ 539 (541)
+|+... +..|.-|...-+. .+.+ -+++..||.++.+..|++.|.
T Consensus 392 rlke~y~VLlsaDGPh~Nil------------------KiKP---PmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 392 RLKELYRVLLSADGPHRNIL------------------KIKP---PMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred HHHHhhhEEEecCCCCCcee------------------ecCC---CcccChhhHHHHHHHHHHHHH
Confidence 776533 5555443322111 0111 146677888888777777764
No 383
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.09 E-value=4e-05 Score=80.02 Aligned_cols=152 Identities=15% Similarity=0.200 Sum_probs=94.3
Q ss_pred CcEEEeCCHH-HHHHHHHHHhc--cCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC--------CCHHHHHHhccC
Q 009172 226 ESTVIMASGM-SASTVMLLALV--PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--------ADMEGLEAALNN 294 (541)
Q Consensus 226 ~~~i~~sSG~-~Ai~~al~all--~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--------~dle~Le~ai~~ 294 (541)
..+++++-.+ .++.+.++++- ..++.||.+...+.+.+.. ....|.++..++. .|++.+++.+++
T Consensus 75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~ka----i~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~ 150 (389)
T PF05889_consen 75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKA----IERAGLEPVVVENVLEGDELITDLEAIEAKIEE 150 (389)
T ss_dssp CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHH----HHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHH
T ss_pred cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHH----HHhcCCeEEEeeccCCCCeeeccHHHHHHHHHH
Confidence 4577775444 35566666653 4578999998888765533 3344777776652 257777777753
Q ss_pred --CCeeEEEEeCCCCCCCcccC-HHHHHHHHHhCCCEEEEEcCCCCCCc------ccccccC-CcEEEECCccccCCCCC
Q 009172 295 --NNVSLFFTESPTNPFLRCVD-VKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG-ADLVLHSATKFIGGHND 364 (541)
Q Consensus 295 --~~tklV~lesp~NPtG~v~d-i~~Ia~la~~~gillvvDea~a~~~~------~~~l~~g-aDivv~S~sK~lgg~g~ 364 (541)
....++++.+++-..++..| +++|+++|++||++.++-++|+.... ++....| .|+++.|+-|-|--+.
T Consensus 151 ~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPv- 229 (389)
T PF05889_consen 151 LGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPV- 229 (389)
T ss_dssp HCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEES-
T ss_pred hCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecC-
Confidence 12578888888877889998 99999999999999999999986321 2233344 6899999999765442
Q ss_pred ceEEEEEeC-hHHHHHHHHH
Q 009172 365 VLAGSISGS-GKLVTQIRNL 383 (541)
Q Consensus 365 v~gG~vv~~-~~li~~l~~~ 383 (541)
.++.+++. +..+..+...
T Consensus 230 -Ggai~As~~~~~i~~vs~~ 248 (389)
T PF05889_consen 230 -GGAIMASFDPSGILAVSKE 248 (389)
T ss_dssp -SHEEEEESSHHHHHHHHHT
T ss_pred -CCcEEEecCHHHHHHHHHH
Confidence 13444443 4566666553
No 384
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.91 E-value=0.00017 Score=73.47 Aligned_cols=179 Identities=14% Similarity=0.227 Sum_probs=101.6
Q ss_pred HHHHHHhccCC-----CeeEEEEeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCCCC------Cccc--ccccC
Q 009172 285 MEGLEAALNNN-----NVSLFFTESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFATP------LNQK--ALSLG 347 (541)
Q Consensus 285 le~Le~ai~~~-----~tklV~lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a~~------~~~~--~l~~g 347 (541)
++++|+.|... .+.+|++|.+....|.-.- ...|.+++++||+.+||||++..+ +... .+...
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 56677776421 4789999999988886542 779999999999999999996431 1111 23345
Q ss_pred CcEEEECCccccCCCCCceEEEEEeChHHHHH-HHHHhhhcCCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 009172 348 ADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ-IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEA 426 (541)
Q Consensus 348 aDivv~S~sK~lgg~g~v~gG~vv~~~~li~~-l~~~~~~~g~~~s~~~a~l~l~~l~tl~~r~~~~~~na~~la~~L~~ 426 (541)
.|+|. |||-+- .||+.. +++++.. -.+..+.+ .-.|.-..++...++.+. .+...+|.....++|..
T Consensus 335 pD~vT--FSKK~q-----~gGffh-~~~frpn~pYrifNTW--mGdP~k~lll~~vv~~I~--~~~Ll~n~~~vG~~l~~ 402 (484)
T KOG1405|consen 335 PDVVT--FSKKFQ-----TGGFFH-DEEFRPNEPYRIFNTW--MGDPSKNLLLEEVVQEIK--REDLLNNVAHVGKALLK 402 (484)
T ss_pred cccee--hhhhhh-----cCcccc-CcccCCCchHHHhhhh--cCChHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHH
Confidence 78887 667665 356544 3333211 11111222 123444444333333322 23344555444444432
Q ss_pred C-CCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCc
Q 009172 427 H-PKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGC 488 (541)
Q Consensus 427 ~-p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~ 488 (541)
. ..+ .-.||+. -...+|.|-+++++++.+ ..-.+|+..+++. |+..||+
T Consensus 403 gL~~L-q~~~p~~---------~~~~RGrGTF~a~d~ps~-~~Rdk~i~~~~~n--Gv~~GGC 452 (484)
T KOG1405|consen 403 GLLEL-QAKYPGK---------INNLRGRGTFIAWDCPSG-SIRDKLILIARLN--GVNLGGC 452 (484)
T ss_pred HHHHH-HHhCchh---------hhcccccceEEEEeCCCh-HHHHHHHHHHHHc--Cceeccc
Confidence 1 001 1234431 123467899999999864 4556788777764 5677775
No 385
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.80 E-value=0.0024 Score=65.90 Aligned_cols=270 Identities=14% Similarity=0.079 Sum_probs=147.7
Q ss_pred hHHHHHHHHHHHhCCC---cEEEeCCHH-HHHHHHHHHhccCCCE--EEEcCCCCcchHHHHHhhcccCCcEEEEeC---
Q 009172 211 TTVVVEEKMSALEGAE---STVIMASGM-SASTVMLLALVPAGGH--IVTTTDCYRKTRIFIETVLPKMGITATVID--- 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~---~~i~~sSG~-~Ai~~al~all~~GD~--VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd--- 281 (541)
...+.++.+.++++.+ +++++.+|. ....++.+.|+..+.. |.+ ..|.... . ...+.++..+...+
T Consensus 51 v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~--g~Ws~~a--~-~eA~~~~~~~~~~~~~~ 125 (365)
T COG1932 51 VLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDT--GAWSEFA--I-KEAKKVGKQPKLIDARI 125 (365)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEee--eehhHhH--H-HHHHHhcccccccccce
Confidence 4667788899999864 355555554 7788888888766542 433 2232211 1 12222322111111
Q ss_pred -------CCCHHHHHHhccCCCeeEEEEeCCCC-CCCcccC-HHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEE
Q 009172 282 -------PADMEGLEAALNNNNVSLFFTESPTN-PFLRCVD-VKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLV 351 (541)
Q Consensus 282 -------~~dle~Le~ai~~~~tklV~lesp~N-PtG~v~d-i~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDiv 351 (541)
..+++.+. +.+ +...|+++ +|+ -+|.-++ .+.+. . +.++|+|.+-... ...+.. ..|++
T Consensus 126 ~~~~~~~iP~~~~~~--~~~-~~ayv~~~-~NeTi~Gv~v~~~p~~~---~--~~~~v~D~SS~ilsr~iDvs--k~dvi 194 (365)
T COG1932 126 EEAGYGSIPDLSKWD--FSD-NDAYVHFC-WNETISGVEVPELPDIG---S--DGLLVADASSAILSRPIDVS--KYDVI 194 (365)
T ss_pred eccCccCCCChhhcc--cCC-CccEEEEe-cCCcccceEccCCCCCC---C--CceEEEecccHHhcCCCChh--HcceE
Confidence 11333322 333 23335553 332 2365444 22221 1 2889999873321 112222 35799
Q ss_pred EECCccccCCCCCceEEEEEeChHHHHHHHHH-h------------hhcCCCccHHHHHHHHHhHHHH------HHHHHH
Q 009172 352 LHSATKFIGGHNDVLAGSISGSGKLVTQIRNL-H------------HVLGGALNPNAAYLIIRGMKTL------HLRVQQ 412 (541)
Q Consensus 352 v~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~-~------------~~~g~~~s~~~a~l~l~~l~tl------~~r~~~ 412 (541)
..+..|.+|+-| .++++.++++++++... . ..+-.+++.+.-++....++++ +...++
T Consensus 195 yagaQKnlGpaG---ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~r 271 (365)
T COG1932 195 YAGAQKNLGPAG---LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEAR 271 (365)
T ss_pred EEehhhccCccc---eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 999999999887 58888899888877543 1 0111344555555554445543 344566
Q ss_pred HHHHHHHHHHHHHhCCCceEEeCCCCCCCchhhhHhhhcCCcccEEEEEEcCCHHHHHHHHHHcCCCceeecCCCcccce
Q 009172 413 QNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 492 (541)
Q Consensus 413 ~~~na~~la~~L~~~p~v~~V~~Pgl~s~p~~~l~~~~~~g~g~~vsf~l~g~~~~~~~~l~~L~~~~iavS~G~~~sl~ 492 (541)
..++++.|.+++++.+.......+..+| --.+.|.+. +.+..+.|+..+...+...-.|
T Consensus 272 n~~ka~~LY~~id~s~fy~~~v~~~~RS--------------~mnV~f~~~-~~~ld~~fv~eae~~gl~~lkG------ 330 (365)
T COG1932 272 NQAKAQLLYDWIDKSDFYRNLVAKANRS--------------RMNVTFTLV-DAELDKGFVAEAEAAGLIYLKG------ 330 (365)
T ss_pred HHHHHHHHHHHHHhCCccccccchhhcc--------------ceeEEEEcC-cHHHHHHHHHHHHHcCCceecc------
Confidence 6788999999999875433222222111 124678876 3455577777776555322222
Q ss_pred ecCcccccccCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHh
Q 009172 493 DQPAIMSYWDLSQSERLKYGIMDNLVRFSFG----VEDFEDLKADVLQALH 539 (541)
Q Consensus 493 ~~pa~~~~~~~~~~~~~~~gi~~~~IRlSvG----~Ed~edli~dL~~AL~ 539 (541)
|+ . .+-+|+|++ +|+.+.|++-++...+
T Consensus 331 -------hr-----------~-vgGmRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 331 -------HR-----------S-VGGLRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred -------cc-----------C-CCceeeeeecCCCHHHHHHHHHHHHHHHH
Confidence 11 1 234999987 3566777666665543
No 386
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.67 E-value=0.0022 Score=64.46 Aligned_cols=159 Identities=16% Similarity=0.208 Sum_probs=112.2
Q ss_pred HHHHHHHhCCC-cEE-EeCCHHHHHHHHHHHhccCC---CEEEEcCCCCcchHHHHHhhcccCCcEEE----EeCCC---
Q 009172 216 EEKMSALEGAE-STV-IMASGMSASTVMLLALVPAG---GHIVTTTDCYRKTRIFIETVLPKMGITAT----VIDPA--- 283 (541)
Q Consensus 216 e~~LA~l~g~~-~~i-~~sSG~~Ai~~al~all~~G---D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~----~vd~~--- 283 (541)
-..++.+.|+. ..+ +++|=+.-+..++.++.+|- -+|+...-.|++-+-.+...++..|+.+. .+.+.
T Consensus 117 l~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGE 196 (465)
T KOG3846|consen 117 LPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGE 196 (465)
T ss_pred hhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccc
Confidence 45567777873 334 44444455666677787775 36888888888876666666777776532 22221
Q ss_pred ---CHHHHHHhccCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEEEECCcc
Q 009172 284 ---DMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATK 357 (541)
Q Consensus 284 ---dle~Le~ai~~~--~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDivv~S~sK 357 (541)
..+++.+.|..+ ...+|++...+-.||...|+.+|...-+..|++|-.|=+++.+ ++.....+|+|+.+-...|
T Consensus 197 etlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYK 276 (465)
T KOG3846|consen 197 ETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYK 276 (465)
T ss_pred cchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeeec
Confidence 234555555322 4788999889999999999999997667789999999987754 4445567899999999999
Q ss_pred ccCCCCCceEEEEEeCh
Q 009172 358 FIGGHNDVLAGSISGSG 374 (541)
Q Consensus 358 ~lgg~g~v~gG~vv~~~ 374 (541)
|++.+.+.+||+.+-.+
T Consensus 277 YlnaGaGgIgGlFvHek 293 (465)
T KOG3846|consen 277 YLNAGAGGIGGLFVHEK 293 (465)
T ss_pred ccccCCCccceeeeehh
Confidence 99866656788877544
No 387
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.63 E-value=0.0014 Score=71.55 Aligned_cols=216 Identities=19% Similarity=0.204 Sum_probs=129.9
Q ss_pred hHHHHHHHHHHHhCCCc-EEEeCCHHHHH---HHHHHHhc-cCCC----EEEEcCCCCcchHHHHHhhcccCCcEEEEeC
Q 009172 211 TTVVVEEKMSALEGAES-TVIMASGMSAS---TVMLLALV-PAGG----HIVTTTDCYRKTRIFIETVLPKMGITATVID 281 (541)
Q Consensus 211 ~~~~Le~~LA~l~g~~~-~i~~sSG~~Ai---~~al~all-~~GD----~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd 281 (541)
...+|++.|+++.|-+. ++--+||.++- ..++++.+ ..|+ .-+++-..|+.... .+...|.+|+.++
T Consensus 583 lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA----SA~MagmkvvpV~ 658 (1001)
T KOG2040|consen 583 LFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA----SAAMAGMKVVPVG 658 (1001)
T ss_pred HHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh----hHHhcCCEEEEee
Confidence 34567888888888764 34456776433 33445543 3443 34666667776542 2344577887776
Q ss_pred CC-----CHHHHHHhccCC--CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCC--CCcccccccCCcEEE
Q 009172 282 PA-----DMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT--PLNQKALSLGADLVL 352 (541)
Q Consensus 282 ~~-----dle~Le~ai~~~--~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~--~~~~~~l~~gaDivv 352 (541)
.+ |..+|++..+++ +..++.+..|+...-.-..++++.++.|+||--|..|.+-.- --..+|-++|+|+.-
T Consensus 659 ~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~H 738 (1001)
T KOG2040|consen 659 CDANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCH 738 (1001)
T ss_pred ccCCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceecccCCcccccccee
Confidence 43 677777666433 467888888884333334699999999999999999998332 123678899999998
Q ss_pred ECCccccC-CCC--CceEEEEEeChHHHHHHHHHh----------h--------hcCCC--ccHHHHHHHHHhHHHHHHH
Q 009172 353 HSATKFIG-GHN--DVLAGSISGSGKLVTQIRNLH----------H--------VLGGA--LNPNAAYLIIRGMKTLHLR 409 (541)
Q Consensus 353 ~S~sK~lg-g~g--~v~gG~vv~~~~li~~l~~~~----------~--------~~g~~--~s~~~a~l~l~~l~tl~~r 409 (541)
--+||.|+ +|| +..+|=+..++.+...|.... . .+|.. +..--+|..+.|...|...
T Consensus 739 LNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~a 818 (1001)
T KOG2040|consen 739 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDA 818 (1001)
T ss_pred ecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchh
Confidence 89999986 222 111233333333332221100 0 11111 1112234444444444444
Q ss_pred HHHHHHHHHHHHHHHHhCCCc
Q 009172 410 VQQQNSTALRMAEILEAHPKV 430 (541)
Q Consensus 410 ~~~~~~na~~la~~L~~~p~v 430 (541)
-+...-|+.+++++|+.|=++
T Consensus 819 s~~AiLNaNYMakRLe~hYki 839 (1001)
T KOG2040|consen 819 SKIAILNANYMAKRLESHYKI 839 (1001)
T ss_pred hHHHhhhhHHHHHHHhhccce
Confidence 455567889999999998554
No 388
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.60 E-value=0.014 Score=63.96 Aligned_cols=137 Identities=20% Similarity=0.359 Sum_probs=96.6
Q ss_pred HHHHHHHhCC--CcEEEeCCHHHHHHHHHHHh-ccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhc
Q 009172 216 EEKMSALEGA--ESTVIMASGMSASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAAL 292 (541)
Q Consensus 216 e~~LA~l~g~--~~~i~~sSG~~Ai~~al~al-l~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai 292 (541)
+..++++.|- ..+-+.--|++|-+++.++. ..++.++++...+|+.+...++...+.+|++++..+ +++...-
T Consensus 169 QTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~---~~~~~~s- 244 (1001)
T KOG2040|consen 169 QTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD---IKEADYS- 244 (1001)
T ss_pred HHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecC---HHHhhcc-
Confidence 4566777775 35556667775544444332 455677999999999999888777788888866544 3333322
Q ss_pred cCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCC-CCCCcccccccCCcEEEECCccc
Q 009172 293 NNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKF 358 (541)
Q Consensus 293 ~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~-a~~~~~~~l~~gaDivv~S~sK~ 358 (541)
.+ ++..|++..|. --|.+.|.+++++.+++.|.++++-.-. +--+...|-++|+||++.|...+
T Consensus 245 ~~-~v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRF 309 (1001)
T KOG2040|consen 245 SK-DVSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRF 309 (1001)
T ss_pred cc-ceeEEEEEcCC-CCCcccCHHHHHHHhhccCceEEEeehhhHHHccCChhhcCceeeecccccc
Confidence 22 48899998887 5699999999999999999887653222 22234567789999999997664
No 389
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.55 E-value=0.0012 Score=69.10 Aligned_cols=211 Identities=13% Similarity=0.140 Sum_probs=124.0
Q ss_pred HHHHHHhCC---CcEEEeCCHHHHHHHHHHHh-c--cC-----C-----CE-EEEcCCCCcchHHHHHhhcccCC---cE
Q 009172 217 EKMSALEGA---ESTVIMASGMSASTVMLLAL-V--PA-----G-----GH-IVTTTDCYRKTRIFIETVLPKMG---IT 276 (541)
Q Consensus 217 ~~LA~l~g~---~~~i~~sSG~~Ai~~al~al-l--~~-----G-----D~-VIv~~~~y~~~~~~~~~~l~~~G---i~ 276 (541)
.++-++.|. .+.|+.++|+-++..++..- - -| | +- +.+++.+|.+..... ..+| -.
T Consensus 148 ~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaA----a~lg~gtd~ 223 (510)
T KOG0629|consen 148 AKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAA----AFLGLGTDH 223 (510)
T ss_pred HHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHH----HHhccCCce
Confidence 334444453 46899989985554444321 0 11 1 23 445566676654332 2233 24
Q ss_pred EEEeCCC-----CHHHHHHhccCCC-----eeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccc---
Q 009172 277 ATVIDPA-----DMEGLEAALNNNN-----VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKA--- 343 (541)
Q Consensus 277 v~~vd~~-----dle~Le~ai~~~~-----tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~--- 343 (541)
++.++.+ ++++||+.|-..+ +-+|-...-+...|..-|++.|+++|++|+.+++||++++.+.....
T Consensus 224 c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R 303 (510)
T KOG0629|consen 224 CIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHR 303 (510)
T ss_pred eEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhH
Confidence 4445432 6888888774322 22333333345568888999999999999999999999988654321
Q ss_pred -ccc---CCcEEEECCccccCCCCCceEEEEEeCh-HHHHHHHHHhh---------------------hcCCCccHHHHH
Q 009172 344 -LSL---GADLVLHSATKFIGGHNDVLAGSISGSG-KLVTQIRNLHH---------------------VLGGALNPNAAY 397 (541)
Q Consensus 344 -l~~---gaDivv~S~sK~lgg~g~v~gG~vv~~~-~li~~l~~~~~---------------------~~g~~~s~~~a~ 397 (541)
.-. -+|-|.-+.||++|.+- -.++...+. .+.++..+... ..|-....+--|
T Consensus 304 ~kl~Giera~SvtwnpHK~~gapl--qCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlW 381 (510)
T KOG0629|consen 304 HKLTGIERANSVTWNPHKLMGAPL--QCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLW 381 (510)
T ss_pred hhccCccccCceeecHHHhhcCcc--hhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHH
Confidence 111 36788889999998553 123322222 22222221100 112234456566
Q ss_pred HHH--HhHHHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Q 009172 398 LII--RGMKTLHLRVQQQNSTALRMAEILEAHPKVKRV 433 (541)
Q Consensus 398 l~l--~~l~tl~~r~~~~~~na~~la~~L~~~p~v~~V 433 (541)
+.. +|.+.++.++++..++++++.+.|++.+....+
T Consensus 382 lmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l 419 (510)
T KOG0629|consen 382 LMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEML 419 (510)
T ss_pred HHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceeh
Confidence 654 355667888888999999999999887654433
No 390
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.49 E-value=0.028 Score=56.91 Aligned_cols=149 Identities=17% Similarity=0.181 Sum_probs=91.9
Q ss_pred EEeCCHHHHHHHHHHHh--ccCCCEEEEcCCCCcchHHHHHhhcccCC----cEEEEeCC----CCHHHHHHhccCCCee
Q 009172 229 VIMASGMSASTVMLLAL--VPAGGHIVTTTDCYRKTRIFIETVLPKMG----ITATVIDP----ADMEGLEAALNNNNVS 298 (541)
Q Consensus 229 i~~sSG~~Ai~~al~al--l~~GD~VIv~~~~y~~~~~~~~~~l~~~G----i~v~~vd~----~dle~Le~ai~~~~tk 298 (541)
+-.-||+.|+..+..-+ .-....|.++.|++......+ +..| .++.++|. .|++.+...|+..+.+
T Consensus 103 vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if----~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~ 178 (410)
T KOG1412|consen 103 VQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIF----EKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEG 178 (410)
T ss_pred eeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHH----HHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCC
Confidence 44567887776654322 223567999999998866444 4445 23445553 3777777766532223
Q ss_pred -EEEEeC-CCCCCCcccC---HHHHHHHHHhCCCEEEEEcCCCCCCcccc----------cccCC-cEEEECCccccCCC
Q 009172 299 -LFFTES-PTNPFLRCVD---VKLVSDLCHKKGAIVCIDGTFATPLNQKA----------LSLGA-DLVLHSATKFIGGH 362 (541)
Q Consensus 299 -lV~les-p~NPtG~v~d---i~~Ia~la~~~gillvvDea~a~~~~~~~----------l~~ga-Divv~S~sK~lgg~ 362 (541)
.+++.. .+||||.-.. ...|++..++++...+.|-+|-.....++ .+.|. -+|+.||+|-+|-.
T Consensus 179 si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlY 258 (410)
T KOG1412|consen 179 SIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLY 258 (410)
T ss_pred cEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccc
Confidence 444433 3799997654 45777777888999999999544322222 12343 27889999999987
Q ss_pred CCceEEE--EEeChHHHHHHH
Q 009172 363 NDVLAGS--ISGSGKLVTQIR 381 (541)
Q Consensus 363 g~v~gG~--vv~~~~li~~l~ 381 (541)
+..+|-+ ++-++..+..+.
T Consensus 259 neRvGnltvv~~n~a~i~~v~ 279 (410)
T KOG1412|consen 259 NERVGNLTVVVNNPAVIAGVK 279 (410)
T ss_pred cccccceEEEecChhHHHHHH
Confidence 7765543 333455554443
No 391
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.02 E-value=0.019 Score=59.18 Aligned_cols=212 Identities=20% Similarity=0.212 Sum_probs=122.4
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcc-----CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe--
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGMSASTVMLLALVP-----AGGHIVTTTDCYRKTRIFIETVLPKMGITATVI-- 280 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~-----~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v-- 280 (541)
++.....|++.+.+.+|-+..+-+.-|-.|-+..+..+++ ||.+.++....|..|.+.... ..|..++-+
T Consensus 77 gsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~---~ng~~~~n~~~ 153 (471)
T COG3033 77 GSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQ---INGATPRNVYV 153 (471)
T ss_pred ccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHH---hcCCccccccc
Confidence 3446778999999999988888888887666665555555 455566666777665443221 222221111
Q ss_pred C-------------CCCHHHHHHhccC---CCeeEEEEeCCCCCC-Cccc---CHHHHHHHHHhCCCEEEEEcC-CCCC-
Q 009172 281 D-------------PADMEGLEAALNN---NNVSLFFTESPTNPF-LRCV---DVKLVSDLCHKKGAIVCIDGT-FATP- 338 (541)
Q Consensus 281 d-------------~~dle~Le~ai~~---~~tklV~lesp~NPt-G~v~---di~~Ia~la~~~gillvvDea-~a~~- 338 (541)
+ ..|++.|+++|++ +++-.|++.--+|.. |... .++++.++|++|+++++.|.+ |+..
T Consensus 154 ~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENa 233 (471)
T COG3033 154 DEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENA 233 (471)
T ss_pred cccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhh
Confidence 1 1278899998864 246666664444443 5544 367999999999999999998 4331
Q ss_pred --Ccccc---------------cccCCcEEEECCccccCCCCCceEEEEEeChH----HHHHHHHHh------hhcCCCc
Q 009172 339 --LNQKA---------------LSLGADLVLHSATKFIGGHNDVLAGSISGSGK----LVTQIRNLH------HVLGGAL 391 (541)
Q Consensus 339 --~~~~~---------------l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~----li~~l~~~~------~~~g~~~ 391 (541)
+.++. .. -+|-.+.|+-|----. +||+++.+++ +...++... ..+|+..
T Consensus 234 YFIk~rE~gYrd~sI~~IarEm~s-YaD~~~mS~KKD~lvn---mGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~ 309 (471)
T COG3033 234 YFIKQREPGYRDWSIEEIAREMYS-YADGCTMSAKKDGLVN---MGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLA 309 (471)
T ss_pred hhhhhcCcccccccHHHHHHHHHh-hhhhheeeccccceec---cccEEEecCccHHHHHHHHHhheEeeccccccCccc
Confidence 11111 11 2577777877742211 6899988765 455554322 1233332
Q ss_pred cHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHhC
Q 009172 392 NPNAAYLIIRGMKTL--HLRVQQQNSTALRMAEILEAH 427 (541)
Q Consensus 392 s~~~a~l~l~~l~tl--~~r~~~~~~na~~la~~L~~~ 427 (541)
+- +...+..||..- ...++......++|++.|++.
T Consensus 310 Gr-dmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~ 346 (471)
T COG3033 310 GR-DMEALAVGLREGVNFDYLAHRVAQVQYLADGLEEA 346 (471)
T ss_pred ch-hHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 22 222222344321 112233334457888888864
No 392
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=96.20 E-value=0.27 Score=50.70 Aligned_cols=194 Identities=16% Similarity=0.198 Sum_probs=108.0
Q ss_pred ccccCChHHHHHHHhcccCCCCCCCCCchhHHHHHHHHHHHh-CC------CcEEE---eCCHHHHH--HHHHHHhccCC
Q 009172 182 AYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEEKMSALE-GA------ESTVI---MASGMSAS--TVMLLALVPAG 249 (541)
Q Consensus 182 t~~~~~~~~~~~~~~~~~~~~~Y~R~~~p~~~~Le~~LA~l~-g~------~~~i~---~sSG~~Ai--~~al~all~~G 249 (541)
.|.++...+.+....+..-.-+|--. -...++.+.-+++. |. +.-++ +-||+.|+ .+.+++..-++
T Consensus 69 p~vL~~VrkAE~ql~~~~ldKEYlpI--~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~ 146 (427)
T KOG1411|consen 69 PYVLPSVRKAEQQLASLSLDKEYLPI--TGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPS 146 (427)
T ss_pred eeeeHHHHHHHHHHhhhcccchhccc--cchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccc
Confidence 45555554433333333223345432 23445555555543 32 12222 34666554 44455555678
Q ss_pred CEEEEcCCCCcchHHHHHhhcccCCcEEEEe---CC----CCHHHHHHhccCCC-eeEEEE-eCCCCCCCcccC---HHH
Q 009172 250 GHIVTTTDCYRKTRIFIETVLPKMGITATVI---DP----ADMEGLEAALNNNN-VSLFFT-ESPTNPFLRCVD---VKL 317 (541)
Q Consensus 250 D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v---d~----~dle~Le~ai~~~~-tklV~l-esp~NPtG~v~d---i~~ 317 (541)
..|.+++|+++... ...+..|+.+.++ ++ .|.+.+.+.+..-. -..|++ .-.+||||.-.- .++
T Consensus 147 ~~I~ip~PTWgNh~----~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~k 222 (427)
T KOG1411|consen 147 RDIYIPDPTWGNHK----NIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEK 222 (427)
T ss_pred cceeecCCcccccC----ccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHH
Confidence 99999999998855 3445556655443 43 25444444343211 123333 235799997654 668
Q ss_pred HHHHHHhCCCEEEEEcCCCCCCcccc----------cccCCc-EEEECCccccCCCCCceEEE--EEeChHHHHHHH
Q 009172 318 VSDLCHKKGAIVCIDGTFATPLNQKA----------LSLGAD-LVLHSATKFIGGHNDVLAGS--ISGSGKLVTQIR 381 (541)
Q Consensus 318 Ia~la~~~gillvvDea~a~~~~~~~----------l~~gaD-ivv~S~sK~lgg~g~v~gG~--vv~~~~li~~l~ 381 (541)
|.++.++.+.+-+.|-+|-++...+. .+.|.+ +++.|+.|-+|--|..+|.+ ++.+.+...++.
T Consensus 223 i~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~ 299 (427)
T KOG1411|consen 223 ISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVE 299 (427)
T ss_pred HHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHH
Confidence 88888999999999999654432211 133444 57789999999777654443 333444444443
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.10 E-value=0.017 Score=53.44 Aligned_cols=50 Identities=10% Similarity=0.358 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHh----C--C---CcEEEeCC-HHHHHHHHHHHhccCCCEEEEcCCCCcc
Q 009172 212 TVVVEEKMSALE----G--A---ESTVIMAS-GMSASTVMLLALVPAGGHIVTTTDCYRK 261 (541)
Q Consensus 212 ~~~Le~~LA~l~----g--~---~~~i~~sS-G~~Ai~~al~all~~GD~VIv~~~~y~~ 261 (541)
..+||+++|+++ | . .+.|++++ +++|+..++.+++.|||.|++++|.|++
T Consensus 94 ~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 94 LANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 445666666554 5 1 13454555 5599999999999999999999999974
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=94.23 E-value=0.21 Score=49.59 Aligned_cols=164 Identities=16% Similarity=0.255 Sum_probs=90.2
Q ss_pred HHHHHHHHHhCC---CcEEEe--CCHHHHHHHHHHHh--ccCC-CEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC---
Q 009172 214 VVEEKMSALEGA---ESTVIM--ASGMSASTVMLLAL--VPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--- 282 (541)
Q Consensus 214 ~Le~~LA~l~g~---~~~i~~--sSG~~Ai~~al~al--l~~G-D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--- 282 (541)
++...+-.+.|. ..++++ .+|| .+.+.+..+ -+|. .-|+-.+..-.+.+ +. .-..|.+...++.
T Consensus 61 e~a~~~i~l~glhav~nc~vvpl~tgm-slslc~~s~r~krpkakyiiw~ridqks~~---ks-i~~agfepiiie~i~d 135 (432)
T KOG3843|consen 61 EFAKDAIHLAGLHAVANCFVVPLATGM-SLSLCFLSLRHKRPKAKYIIWLRIDQKSCF---KS-IIHAGFEPIIIENILD 135 (432)
T ss_pred HHHHHHHHHhhhhhhhceeEEeccccc-cHHHHHHHHhhcCCcccEEEEEecchHHHH---HH-HHhcCCCceeeecccc
Confidence 343333345553 466665 4566 345555544 2343 34554443332222 11 1123555444432
Q ss_pred -----CCHHHHHHhccCCCee-EEEEeCCCCC-CCcccC-HHHHHHHHHhCCCEEEEEcCCCCCCc------ccccccC-
Q 009172 283 -----ADMEGLEAALNNNNVS-LFFTESPTNP-FLRCVD-VKLVSDLCHKKGAIVCIDGTFATPLN------QKALSLG- 347 (541)
Q Consensus 283 -----~dle~Le~ai~~~~tk-lV~lesp~NP-tG~v~d-i~~Ia~la~~~gillvvDea~a~~~~------~~~l~~g- 347 (541)
.|++.+++.+++.... ++.+.+-++- .-+..| +++|+.+|..|+++-+|.++|+..-. ....+.|
T Consensus 136 ~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~gr 215 (432)
T KOG3843|consen 136 GDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGR 215 (432)
T ss_pred chHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhcc
Confidence 2678888777653233 3333222211 122233 89999999999999999999874321 1112233
Q ss_pred CcEEEECCccccCCCCCceEEEEEe--ChHHHHHHHHHhh
Q 009172 348 ADLVLHSATKFIGGHNDVLAGSISG--SGKLVTQIRNLHH 385 (541)
Q Consensus 348 aDivv~S~sK~lgg~g~v~gG~vv~--~~~li~~l~~~~~ 385 (541)
+|.++.|+-|.|--+ +||+++. ++.+++.+.+...
T Consensus 216 ida~vqsldknf~vp---vggaiia~fk~n~iq~iak~yp 252 (432)
T KOG3843|consen 216 IDAFVQSLDKNFMVP---VGGAIIAAFKDNFIQEIAKMYP 252 (432)
T ss_pred HHHHHHHhhhcceee---cchhHhhHhHHHHHHHHHHhCC
Confidence 588999999998865 4677664 5567776665543
No 395
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=86.37 E-value=2 Score=37.31 Aligned_cols=89 Identities=18% Similarity=0.238 Sum_probs=59.9
Q ss_pred HHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEEcCCCCCC
Q 009172 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPL 339 (541)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~--gillvvDea~a~~~ 339 (541)
...+...+++.|.++.+++.. +.+++.+.+...++.+|.+.... +.......++++..++. ++.+++=..+.+..
T Consensus 17 l~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~t~~ 94 (121)
T PF02310_consen 17 LLYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPHATAD 94 (121)
T ss_dssp HHHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESSSGHH
T ss_pred HHHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCchhcC
Confidence 344556678889999998765 46777776655467888884433 34445567888877776 78999877766554
Q ss_pred cccccc--cCCcEEEE
Q 009172 340 NQKALS--LGADLVLH 353 (541)
Q Consensus 340 ~~~~l~--~gaDivv~ 353 (541)
+...++ .++|.++.
T Consensus 95 ~~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 95 PEEILREYPGIDYVVR 110 (121)
T ss_dssp HHHHHHHHHTSEEEEE
T ss_pred hHHHhccCcCcceecC
Confidence 444443 68887764
No 396
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=81.85 E-value=7 Score=33.96 Aligned_cols=90 Identities=12% Similarity=0.067 Sum_probs=55.8
Q ss_pred HHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC---CCEEEEEcCCCCC
Q 009172 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGTFATP 338 (541)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~---gillvvDea~a~~ 338 (541)
..++..+++..|.++.+.... .++++.+.+.+.++.+|.+..-. +.....+.++.+.+++. ++.+++=......
T Consensus 16 ~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~ 93 (119)
T cd02067 16 KNIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTR 93 (119)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEEECCCCCh
Confidence 344556788889999876543 56777776665567888884332 23345667777777775 4666665543332
Q ss_pred CcccccccCCcEEEEC
Q 009172 339 LNQKALSLGADLVLHS 354 (541)
Q Consensus 339 ~~~~~l~~gaDivv~S 354 (541)
........|+|.++..
T Consensus 94 ~~~~~~~~G~D~~~~~ 109 (119)
T cd02067 94 DFKFLKEIGVDAYFGP 109 (119)
T ss_pred hHHHHHHcCCeEEECC
Confidence 2223445688877754
No 397
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=75.88 E-value=10 Score=36.83 Aligned_cols=61 Identities=25% Similarity=0.249 Sum_probs=41.0
Q ss_pred hcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009172 269 VLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 269 ~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvv 331 (541)
.++..|+++...|..|.+.|.++++. ...|++..+.+......-...|++.|++.|+..++
T Consensus 39 ~l~~~g~~vv~~d~~~~~~l~~al~g--~d~v~~~~~~~~~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 39 QLQALGAEVVEADYDDPESLVAALKG--VDAVFSVTPPSHPSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHTTTEEEES-TT-HHHHHHHHTT--CSEEEEESSCSCCCHHHHHHHHHHHHHHHT-SEEE
T ss_pred hhhcccceEeecccCCHHHHHHHHcC--CceEEeecCcchhhhhhhhhhHHHhhhccccceEE
Confidence 35567999998899999999999974 56677766654433333355788888887764443
No 398
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=68.17 E-value=28 Score=33.75 Aligned_cols=124 Identities=16% Similarity=0.139 Sum_probs=73.1
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHH--HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCc--EEEEeCCC
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPA 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~--~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi--~v~~vd~~ 283 (541)
-.|...++-+.|++..++..++=+++++ +++.++ . .+.++.+|++-+..- ......+..+++.|. .+.++..+
T Consensus 29 i~~~~g~lL~~l~~~~~~k~vLEIGt~~GySal~la-~-~l~~~g~i~tiE~~~-~~~~~A~~~~~~ag~~~~I~~~~gd 105 (205)
T PF01596_consen 29 ISPETGQLLQMLVRLTRPKRVLEIGTFTGYSALWLA-E-ALPEDGKITTIEIDP-ERAEIARENFRKAGLDDRIEVIEGD 105 (205)
T ss_dssp HHHHHHHHHHHHHHHHT-SEEEEESTTTSHHHHHHH-H-TSTTTSEEEEEESSH-HHHHHHHHHHHHTTGGGGEEEEES-
T ss_pred cCHHHHHHHHHHHHhcCCceEEEeccccccHHHHHH-H-hhcccceEEEecCcH-HHHHHHHHHHHhcCCCCcEEEEEec
Confidence 4566677788888899998887776654 665544 2 345566887766543 223444445555554 34444443
Q ss_pred CHHHHHHhccCC---CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCC
Q 009172 284 DMEGLEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 284 dle~Le~ai~~~---~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~ 337 (541)
-.+-|.+..... +-.+||+... .......++.+.++.+ .|.++|+||+...
T Consensus 106 a~~~l~~l~~~~~~~~fD~VFiDa~--K~~y~~y~~~~~~ll~-~ggvii~DN~l~~ 159 (205)
T PF01596_consen 106 ALEVLPELANDGEEGQFDFVFIDAD--KRNYLEYFEKALPLLR-PGGVIIADNVLWR 159 (205)
T ss_dssp HHHHHHHHHHTTTTTSEEEEEEEST--GGGHHHHHHHHHHHEE-EEEEEEEETTTGG
T ss_pred cHhhHHHHHhccCCCceeEEEEccc--ccchhhHHHHHhhhcc-CCeEEEEcccccc
Confidence 344455544322 3789999763 2333333556666665 4789999999543
No 399
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=66.98 E-value=25 Score=30.39 Aligned_cols=84 Identities=14% Similarity=0.091 Sum_probs=49.6
Q ss_pred HHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCC---CHHHHHHhccC-CCeeEEEEeCCC--CCCCcccC
Q 009172 241 MLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPA---DMEGLEAALNN-NNVSLFFTESPT--NPFLRCVD 314 (541)
Q Consensus 241 al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~---dle~Le~ai~~-~~tklV~lesp~--NPtG~v~d 314 (541)
.+..+.+-|=+|+.+. +|..+ ++..|+++..+... .-.++.+.+.+ .++.+|+. .|+ +......|
T Consensus 17 ~a~~l~~~G~~i~AT~----gTa~~----L~~~Gi~~~~v~~~~~~g~~~i~~~i~~~g~idlVIn-~~~~~~~~~~~~d 87 (112)
T cd00532 17 LAPKLSSDGFPLFATG----GTSRV----LADAGIPVRAVSKRHEDGEPTVDAAIAEKGKFDVVIN-LRDPRRDRCTDED 87 (112)
T ss_pred HHHHHHHCCCEEEECc----HHHHH----HHHcCCceEEEEecCCCCCcHHHHHHhCCCCEEEEEE-cCCCCcccccCCC
Confidence 3344445566666543 33333 34467776665321 12445666666 66877765 443 21123456
Q ss_pred HHHHHHHHHhCCCEEEEEc
Q 009172 315 VKLVSDLCHKKGAIVCIDG 333 (541)
Q Consensus 315 i~~Ia~la~~~gillvvDe 333 (541)
-..|.+.|-+++++++.+-
T Consensus 88 g~~iRR~A~~~~Ip~~T~~ 106 (112)
T cd00532 88 GTALLRLARLYKIPVTTPN 106 (112)
T ss_pred hHHHHHHHHHcCCCEEECH
Confidence 7799999999999998763
No 400
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=63.80 E-value=24 Score=39.04 Aligned_cols=85 Identities=18% Similarity=0.176 Sum_probs=56.4
Q ss_pred HHhhcccCC-cEEEEeCCC----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEEcCCCCC
Q 009172 266 IETVLPKMG-ITATVIDPA----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATP 338 (541)
Q Consensus 266 ~~~~l~~~G-i~v~~vd~~----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~--gillvvDea~a~~ 338 (541)
+...++..| .+|.++|.. +.+++.+.+...++.+|.+... |.......++++.+++. ++.+|+=+.+++.
T Consensus 28 lAa~L~~~G~~~V~iiD~~~~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t~ 104 (497)
T TIGR02026 28 IGGALLDAGYHDVTFLDAMTGPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPTF 104 (497)
T ss_pred HHHHHHhcCCcceEEecccccCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcCc
Confidence 334466678 688888743 5677777775545788888432 33444566888888876 9999998887766
Q ss_pred Ccccccc--cCCcEEEE
Q 009172 339 LNQKALS--LGADLVLH 353 (541)
Q Consensus 339 ~~~~~l~--~gaDivv~ 353 (541)
.+...+. .++|+++.
T Consensus 105 ~~~~~l~~~p~vD~Vv~ 121 (497)
T TIGR02026 105 MFHQVLTEAPWIDFIVR 121 (497)
T ss_pred CHHHHHhcCCCccEEEe
Confidence 5544442 35787764
No 401
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=62.19 E-value=33 Score=30.06 Aligned_cols=83 Identities=14% Similarity=0.149 Sum_probs=49.8
Q ss_pred HhhcccCCcEEEEeCCCCHHHHHHhccC-CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC--CEEEEEcCCCCCCccc-
Q 009172 267 ETVLPKMGITATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQK- 342 (541)
Q Consensus 267 ~~~l~~~Gi~v~~vd~~dle~Le~ai~~-~~tklV~lesp~NPtG~v~di~~Ia~la~~~g--illvvDea~a~~~~~~- 342 (541)
...++..|..+...+....+...+.+.. .+.++|.+.. .+.......++++..|+.+ +++++=..+.+..+..
T Consensus 9 aa~l~~~g~~v~~~~~~~~~~~~~~~~~~~~pdiv~~S~---~~~~~~~~~~~~~~ik~~~p~~~iv~GG~~~t~~p~~~ 85 (127)
T cd02068 9 AAVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISL---MTSAIYEALELAKIAKEVLPNVIVVVGGPHATFFPEEI 85 (127)
T ss_pred HHHHHHCCCeeeecCCCCHHHHHHHHHHhcCCCEEEEee---ccccHHHHHHHHHHHHHHCCCCEEEECCcchhhCHHHH
Confidence 3456667888887776666655555543 3477888743 2333335677888888764 8888876665544333
Q ss_pred ccccCCcEEE
Q 009172 343 ALSLGADLVL 352 (541)
Q Consensus 343 ~l~~gaDivv 352 (541)
....++|+++
T Consensus 86 ~~~~~~D~vv 95 (127)
T cd02068 86 LEEPGVDFVV 95 (127)
T ss_pred hcCCCCCEEE
Confidence 1233456554
No 402
>PLN02476 O-methyltransferase
Probab=61.49 E-value=65 Score=32.82 Aligned_cols=123 Identities=16% Similarity=0.257 Sum_probs=70.7
Q ss_pred CchhHHHHHHHHHHHhCCCcEEE--eCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcE--EEEeCCC
Q 009172 208 GNPTTVVVEEKMSALEGAESTVI--MASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPA 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~--~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~--v~~vd~~ 283 (541)
..|...++...++++.++..++= +..|..++.++. .+.++.+|++.+..- ......+..+++.|+. +..+..+
T Consensus 102 v~~~~g~lL~~L~~~~~ak~VLEIGT~tGySal~lA~--al~~~G~V~TiE~d~-e~~~~Ar~n~~~aGl~~~I~li~Gd 178 (278)
T PLN02476 102 VSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAVAL--VLPESGCLVACERDS-NSLEVAKRYYELAGVSHKVNVKHGL 178 (278)
T ss_pred cCHHHHHHHHHHHHhcCCCeEEEecCCCCHHHHHHHH--hCCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 46778888999999999877654 445556665543 245556766655433 2234444555666663 4444333
Q ss_pred CHHHHHHhcc---CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCC
Q 009172 284 DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 284 dle~Le~ai~---~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a 336 (541)
-.+-|.+... ..+-.+||+...- .....-++.+.++.+. |.++|+||+..
T Consensus 179 A~e~L~~l~~~~~~~~FD~VFIDa~K--~~Y~~y~e~~l~lL~~-GGvIV~DNvL~ 231 (278)
T PLN02476 179 AAESLKSMIQNGEGSSYDFAFVDADK--RMYQDYFELLLQLVRV-GGVIVMDNVLW 231 (278)
T ss_pred HHHHHHHHHhcccCCCCCEEEECCCH--HHHHHHHHHHHHhcCC-CcEEEEecCcc
Confidence 3444444331 1246799996542 2222224555555544 77788999853
No 403
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=61.27 E-value=1.1e+02 Score=30.17 Aligned_cols=127 Identities=20% Similarity=0.325 Sum_probs=66.5
Q ss_pred HHHHhccCCCEEEEcCCC-CcchHHHHHhhcccCCcEEEE--eCCCCHHHHHHhccCCCeeEEEEeCCCCCC--Ccc-cC
Q 009172 241 MLLALVPAGGHIVTTTDC-YRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRC-VD 314 (541)
Q Consensus 241 al~all~~GD~VIv~~~~-y~~~~~~~~~~l~~~Gi~v~~--vd~~dle~Le~ai~~~~tklV~lesp~NPt--G~v-~d 314 (541)
-+..+.+.|-..|+-..+ ..-..+.+ +..+..|++.-. -+...++.++..+.. ..+|.+.+.+ |. |.- .|
T Consensus 76 ~i~~fa~agad~It~H~E~~~~~~r~i-~~Ik~~G~kaGv~lnP~Tp~~~i~~~l~~--vD~VllMsVn-PGfgGQ~Fi~ 151 (220)
T COG0036 76 YIEAFAKAGADIITFHAEATEHIHRTI-QLIKELGVKAGLVLNPATPLEALEPVLDD--VDLVLLMSVN-PGFGGQKFIP 151 (220)
T ss_pred HHHHHHHhCCCEEEEEeccCcCHHHHH-HHHHHcCCeEEEEECCCCCHHHHHHHHhh--CCEEEEEeEC-CCCcccccCH
Confidence 344556667444443333 22223333 334556765433 355678888888864 6777776654 53 332 22
Q ss_pred --HHHH---HHHHHhC-CCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCCCceEEEEEeChHHHHHHHHHh
Q 009172 315 --VKLV---SDLCHKK-GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLH 384 (541)
Q Consensus 315 --i~~I---a~la~~~-gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g~v~gG~vv~~~~li~~l~~~~ 384 (541)
+++| .++..+. ++.+-+|.-...--.....+.|+|+++ .|-++...+++.+.++.++
T Consensus 152 ~~l~Ki~~lr~~~~~~~~~~IeVDGGI~~~t~~~~~~AGad~~V-------------aGSalF~~~d~~~~i~~~~ 214 (220)
T COG0036 152 EVLEKIRELRAMIDERLDILIEVDGGINLETIKQLAAAGADVFV-------------AGSALFGADDYKATIRELR 214 (220)
T ss_pred HHHHHHHHHHHHhcccCCeEEEEeCCcCHHHHHHHHHcCCCEEE-------------EEEEEeCCccHHHHHHHHH
Confidence 3444 4444432 567778864321111223457999887 2345566555656655544
No 404
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=61.21 E-value=1.2e+02 Score=30.35 Aligned_cols=123 Identities=17% Similarity=0.202 Sum_probs=71.7
Q ss_pred chhHHHHHHHHHHHhCCCcEEEeCC--HHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCc--EEEEeCCCC
Q 009172 209 NPTTVVVEEKMSALEGAESTVIMAS--GMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI--TATVIDPAD 284 (541)
Q Consensus 209 ~p~~~~Le~~LA~l~g~~~~i~~sS--G~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi--~v~~vd~~d 284 (541)
.|..-+|-..+++..++..++=+++ |.+++.++. + +.++.+|++.+..- ......+..++..|+ .+.++..+-
T Consensus 64 ~~~~g~lL~~l~~~~~ak~iLEiGT~~GySal~la~-a-l~~~g~v~tiE~~~-~~~~~Ar~~~~~ag~~~~I~~~~G~a 140 (247)
T PLN02589 64 SADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATAL-A-LPEDGKILAMDINR-ENYELGLPVIQKAGVAHKIDFREGPA 140 (247)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEEeChhhHHHHHHHh-h-CCCCCEEEEEeCCH-HHHHHHHHHHHHCCCCCceEEEeccH
Confidence 5677788888889989887765554 446665442 2 45666887776542 223334444555553 344443333
Q ss_pred HHHHHHhccC----CCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCC
Q 009172 285 MEGLEAALNN----NNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 285 le~Le~ai~~----~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~ 337 (541)
.+-|.+.... .+..+||+.. +.......++.+.++.+. |.++|+||+.-.
T Consensus 141 ~e~L~~l~~~~~~~~~fD~iFiDa--dK~~Y~~y~~~~l~ll~~-GGviv~DNvl~~ 194 (247)
T PLN02589 141 LPVLDQMIEDGKYHGTFDFIFVDA--DKDNYINYHKRLIDLVKV-GGVIGYDNTLWN 194 (247)
T ss_pred HHHHHHHHhccccCCcccEEEecC--CHHHhHHHHHHHHHhcCC-CeEEEEcCCCCC
Confidence 4444444321 2478999964 233344445566666654 777999998543
No 405
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=60.47 E-value=34 Score=36.21 Aligned_cols=83 Identities=18% Similarity=0.093 Sum_probs=56.1
Q ss_pred HHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCccc-----CHHHHHHHHHhCCCEEEEEcCCCCCC-
Q 009172 266 IETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKKGAIVCIDGTFATPL- 339 (541)
Q Consensus 266 ~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~-----di~~Ia~la~~~gillvvDea~a~~~- 339 (541)
++.+.+..+..+..-...+.++.+.+++-. ...|.+. |-.|+-. +++.|.++++..++.|++|.-...+.
T Consensus 228 i~~ir~~~~~pviiKgV~~~eda~~a~~~G-~d~I~VS---nhGGrqld~~~~~~~~L~ei~~~~~~~vi~dGGIr~g~D 303 (361)
T cd04736 228 LRWLRDLWPHKLLVKGIVTAEDAKRCIELG-ADGVILS---NHGGRQLDDAIAPIEALAEIVAATYKPVLIDSGIRRGSD 303 (361)
T ss_pred HHHHHHhCCCCEEEecCCCHHHHHHHHHCC-cCEEEEC---CCCcCCCcCCccHHHHHHHHHHHhCCeEEEeCCCCCHHH
Confidence 333444455555555667888888888764 8888884 4445443 48888888888889999997654443
Q ss_pred cccccccCCcEEE
Q 009172 340 NQKALSLGADLVL 352 (541)
Q Consensus 340 ~~~~l~~gaDivv 352 (541)
..+.+.+|+|.|.
T Consensus 304 v~KALaLGA~aV~ 316 (361)
T cd04736 304 IVKALALGANAVL 316 (361)
T ss_pred HHHHHHcCCCEEE
Confidence 2456677777665
No 406
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=59.71 E-value=85 Score=31.00 Aligned_cols=80 Identities=20% Similarity=0.237 Sum_probs=43.6
Q ss_pred cccCCc--EE--EEeCCCCHHHHHHhccCCCeeEEEEeCCCCCC--Ccc-cC-----HHHHHHHHHhCC--CEEEEEcCC
Q 009172 270 LPKMGI--TA--TVIDPADMEGLEAALNNNNVSLFFTESPTNPF--LRC-VD-----VKLVSDLCHKKG--AIVCIDGTF 335 (541)
Q Consensus 270 l~~~Gi--~v--~~vd~~dle~Le~ai~~~~tklV~lesp~NPt--G~v-~d-----i~~Ia~la~~~g--illvvDea~ 335 (541)
.+..|. +. ..-+...++.++..+.. +..|.+.+. ||. |.- .+ ++++.++.+++| ..+-+|.--
T Consensus 112 Ik~~g~~~kaGlalnP~Tp~~~i~~~l~~--vD~VLiMtV-~PGfgGQ~f~~~~l~KI~~lr~~~~~~~~~~~IeVDGGI 188 (228)
T PRK08091 112 LAKQKTTVLIGLCLCPETPISLLEPYLDQ--IDLIQILTL-DPRTGTKAPSDLILDRVIQVENRLGNRRVEKLISIDGSM 188 (228)
T ss_pred HHHCCCCceEEEEECCCCCHHHHHHHHhh--cCEEEEEEE-CCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCC
Confidence 445555 33 22344678888888864 455555444 342 333 22 344445555554 778899743
Q ss_pred CCCCcccccccCCcEEE
Q 009172 336 ATPLNQKALSLGADLVL 352 (541)
Q Consensus 336 a~~~~~~~l~~gaDivv 352 (541)
...-.....+.|+|+++
T Consensus 189 ~~~ti~~l~~aGaD~~V 205 (228)
T PRK08091 189 TLELASYLKQHQIDWVV 205 (228)
T ss_pred CHHHHHHHHHCCCCEEE
Confidence 22111233567999877
No 407
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=58.03 E-value=94 Score=32.80 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=32.4
Q ss_pred CeeEEEEeC-----CCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC
Q 009172 296 NVSLFFTES-----PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 296 ~tklV~les-----p~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~ 339 (541)
+.++++++- -+..+-...|+..|..+-+..+.++|+|-+++.+.
T Consensus 236 n~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 236 NPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 356777765 22223466889999988777799999999988764
No 408
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=57.40 E-value=2.5e+02 Score=29.46 Aligned_cols=125 Identities=18% Similarity=0.138 Sum_probs=69.9
Q ss_pred EEEeCCHH-HHHHHHHHHhccCC--CEEEEcCCCCcchHHHHH---hhcccC-CcEEEEeCCCCHHHHHHhccCCCeeEE
Q 009172 228 TVIMASGM-SASTVMLLALVPAG--GHIVTTTDCYRKTRIFIE---TVLPKM-GITATVIDPADMEGLEAALNNNNVSLF 300 (541)
Q Consensus 228 ~i~~sSG~-~Ai~~al~all~~G--D~VIv~~~~y~~~~~~~~---~~l~~~-Gi~v~~vd~~dle~Le~ai~~~~tklV 300 (541)
.+..+.|+ +.-.--+..|++.| =.+|+-+..|+-....++ .+-+.+ +..+.--+..+.+..+.+++.. ...|
T Consensus 97 ~~~vsvG~~~~d~er~~~L~~a~~~~d~iviD~AhGhs~~~i~~ik~ir~~~p~~~viaGNV~T~e~a~~Li~aG-AD~i 175 (343)
T TIGR01305 97 NVAVSSGSSDNDLEKMTSILEAVPQLKFICLDVANGYSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILSG-ADIV 175 (343)
T ss_pred eEEEEeccCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHhhCCCCeEEEecccCHHHHHHHHHcC-CCEE
Confidence 44456676 44334445555543 345555666665443332 222222 3444433456788888888753 6666
Q ss_pred EEe-CC-CCCCCccc-----C----HHHHHHHHHhCCCEEEEEcCCCC-CCcccccccCCcEEEE
Q 009172 301 FTE-SP-TNPFLRCV-----D----VKLVSDLCHKKGAIVCIDGTFAT-PLNQKALSLGADLVLH 353 (541)
Q Consensus 301 ~le-sp-~NPtG~v~-----d----i~~Ia~la~~~gillvvDea~a~-~~~~~~l~~gaDivv~ 353 (541)
.+. -| +|-+++.. | +.++++.++++++.+|.|.-.-. +-..+.+..|+|.|.-
T Consensus 176 kVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGGIr~~gDI~KALA~GAd~VMl 240 (343)
T TIGR01305 176 KVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGCTCPGDVAKAFGAGADFVML 240 (343)
T ss_pred EEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCCcCchhHHHHHHHcCCCEEEE
Confidence 553 12 23333332 2 44555666677999999986433 2335677889998873
No 409
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=54.05 E-value=1.5e+02 Score=32.04 Aligned_cols=85 Identities=15% Similarity=0.198 Sum_probs=52.0
Q ss_pred HhccCCCEEEEcCCCCcchHHHHHhhcccCCc---EEEEeCCCCHHHHHHhccCCCeeEEEEeCCC---CCC-----Ccc
Q 009172 244 ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI---TATVIDPADMEGLEAALNNNNVSLFFTESPT---NPF-----LRC 312 (541)
Q Consensus 244 all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi---~v~~vd~~dle~Le~ai~~~~tklV~lesp~---NPt-----G~v 312 (541)
.+.+.+ .|++-.-+-.. ..++..+.++|+ .+......+++++.+.+++.+++++++.+++ ++. |.+
T Consensus 116 ~lA~~~-~vLYVsGEES~--~QiklRA~RL~~~~~~l~l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsV 192 (456)
T COG1066 116 RLAKRG-KVLYVSGEESL--QQIKLRADRLGLPTNNLYLLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSV 192 (456)
T ss_pred HHHhcC-cEEEEeCCcCH--HHHHHHHHHhCCCccceEEehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcH
Confidence 345556 55443333222 223333556664 2333345689999998877778999998876 333 544
Q ss_pred cCHH----HHHHHHHhCCCEEEE
Q 009172 313 VDVK----LVSDLCHKKGAIVCI 331 (541)
Q Consensus 313 ~di~----~Ia~la~~~gillvv 331 (541)
..++ +|.++|++.|+.+++
T Consensus 193 sQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 193 SQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEE
Confidence 4433 788999999987654
No 410
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=53.55 E-value=51 Score=28.82 Aligned_cols=96 Identities=14% Similarity=0.067 Sum_probs=54.5
Q ss_pred CcchHHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC---CCEEEEEcC
Q 009172 259 YRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK---GAIVCIDGT 334 (541)
Q Consensus 259 y~~~~~~~~~~l~~~Gi~v~~vd~~-dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~---gillvvDea 334 (541)
|.--..++..+++..|.++.+.... .++++.+++.+.+..+|.++.... -....++++.+..++. ++.+++=..
T Consensus 12 H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~--~~~~~~~~~~~~L~~~~~~~i~i~~GG~ 89 (122)
T cd02071 12 HDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSG--GHMTLFPEVIELLRELGAGDILVVGGGI 89 (122)
T ss_pred hHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccch--hhHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 3333444556788889999887653 566666665554678888854432 2333467777777765 556666443
Q ss_pred CCCCCcccccccCCcEEEECCc
Q 009172 335 FATPLNQKALSLGADLVLHSAT 356 (541)
Q Consensus 335 ~a~~~~~~~l~~gaDivv~S~s 356 (541)
...-......+.|.|-+++..+
T Consensus 90 ~~~~~~~~~~~~G~d~~~~~~~ 111 (122)
T cd02071 90 IPPEDYELLKEMGVAEIFGPGT 111 (122)
T ss_pred CCHHHHHHHHHCCCCEEECCCC
Confidence 1110011123567776664433
No 411
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=53.24 E-value=1.1e+02 Score=26.33 Aligned_cols=30 Identities=10% Similarity=0.038 Sum_probs=20.5
Q ss_pred eeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEE
Q 009172 297 VSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 297 tklV~lesp~NPtG~v~di~~Ia~la~~~gillv 330 (541)
..+|++ +..|...++-++++.++++|+.++
T Consensus 62 ~~~i~i----S~~g~~~~~~~~~~~a~~~g~~iv 91 (139)
T cd05013 62 DVVIAI----SFSGETKETVEAAEIAKERGAKVI 91 (139)
T ss_pred CEEEEE----eCCCCCHHHHHHHHHHHHcCCeEE
Confidence 445555 344666677788899999987654
No 412
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=53.04 E-value=60 Score=32.55 Aligned_cols=99 Identities=24% Similarity=0.291 Sum_probs=55.8
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcc----hHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEE
Q 009172 226 ESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRK----TRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (541)
Q Consensus 226 ~~~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~----~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~ 301 (541)
.-.|.|++|.....++..+.-.-||+|+..+-..+- ...-....++..|++-.+++.+-++ ++ +
T Consensus 19 kv~vAfSGGvDSslLa~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~~~~-------~~-----~ 86 (269)
T COG1606 19 KVVVAFSGGVDSSLLAKLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMNRMD-------PE-----F 86 (269)
T ss_pred eEEEEecCCccHHHHHHHHHHHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehhhcc-------hh-----h
Confidence 347888888855444444433346766543332222 2222334566778887776643221 11 1
Q ss_pred EeCCCCCCCccc--CHHHHHHHHHhCCCEEEEEcCCC
Q 009172 302 TESPTNPFLRCV--DVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 302 lesp~NPtG~v~--di~~Ia~la~~~gillvvDea~a 336 (541)
..+|-|+.-.+- =.+.|.+.++++|.-+|+|.|-+
T Consensus 87 ~~n~~~rCY~CK~~v~~~l~~~a~~~Gyd~V~dGtNa 123 (269)
T COG1606 87 KENPENRCYLCKRAVYSTLVEEAEKRGYDVVADGTNA 123 (269)
T ss_pred ccCCCCcchHHHHHHHHHHHHHHHHcCCCEEEeCCcH
Confidence 223333332221 25688899999999999999944
No 413
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=52.07 E-value=1.7e+02 Score=27.42 Aligned_cols=104 Identities=13% Similarity=0.179 Sum_probs=54.1
Q ss_pred cEEEeC-CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCC
Q 009172 227 STVIMA-SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (541)
Q Consensus 227 ~~i~~s-SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp 305 (541)
.++++. +|..+- .+...+.+.|.+|++..........+...+....+.++...+..+.+++.+++.+ ..+|+..+|
T Consensus 30 ~vlVlGgtG~iG~-~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~diVi~at~ 106 (194)
T cd01078 30 TAVVLGGTGPVGQ-RAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG--ADVVFAAGA 106 (194)
T ss_pred EEEEECCCCHHHH-HHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc--CCEEEECCC
Confidence 466665 365443 3333445567676665443322222222222234666766777788888888864 567776554
Q ss_pred CCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC
Q 009172 306 TNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 306 ~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~ 339 (541)
. |...+ .+.+... ....+++|-.+....
T Consensus 107 ~---g~~~~--~~~~~~~-~~~~vv~D~~~~~~~ 134 (194)
T cd01078 107 A---GVELL--EKLAWAP-KPLAVAADVNAVPPV 134 (194)
T ss_pred C---Cceec--hhhhccc-CceeEEEEccCCCCC
Confidence 4 33211 1111111 125689998765443
No 414
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=50.14 E-value=73 Score=28.52 Aligned_cols=72 Identities=15% Similarity=0.048 Sum_probs=45.1
Q ss_pred CCcchHHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC---CEEEE
Q 009172 258 CYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG---AIVCI 331 (541)
Q Consensus 258 ~y~~~~~~~~~~l~~~Gi~v~~vd~~-dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~g---illvv 331 (541)
.|.--..+....++..|.+|.....+ .++++.++..+.+..+|.+++-. +....-++++.+..++.| +.+++
T Consensus 14 ~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~--~~~~~~~~~~~~~L~~~g~~~i~viv 89 (132)
T TIGR00640 14 GHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLA--GGHLTLVPALRKELDKLGRPDILVVV 89 (132)
T ss_pred ccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCch--hhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 45444556667788889999876643 45555444433358888885544 334444778888777753 45555
No 415
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=49.94 E-value=1.4e+02 Score=29.44 Aligned_cols=81 Identities=16% Similarity=0.150 Sum_probs=43.9
Q ss_pred hcccCCcEEEE--eCCCCHHHHHHhccCCCeeEEEEeCCCCCC--Cccc-C--H---HHHHHHHHhC--CCEEEEEcCCC
Q 009172 269 VLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV-D--V---KLVSDLCHKK--GAIVCIDGTFA 336 (541)
Q Consensus 269 ~l~~~Gi~v~~--vd~~dle~Le~ai~~~~tklV~lesp~NPt--G~v~-d--i---~~Ia~la~~~--gillvvDea~a 336 (541)
..+..|++.-. -+...++.++..+.. +..|.+.+.+ |. |.-. + + +++.++.+++ ++.+-||.--.
T Consensus 105 ~Ir~~g~k~GlalnP~T~~~~i~~~l~~--vD~VlvMtV~-PGf~GQ~fi~~~l~KI~~l~~~~~~~~~~~~IeVDGGI~ 181 (223)
T PRK08745 105 LIKSHGCQAGLVLNPATPVDILDWVLPE--LDLVLVMSVN-PGFGGQAFIPSALDKLRAIRKKIDALGKPIRLEIDGGVK 181 (223)
T ss_pred HHHHCCCceeEEeCCCCCHHHHHHHHhh--cCEEEEEEEC-CCCCCccccHHHHHHHHHHHHHHHhcCCCeeEEEECCCC
Confidence 34555655433 244578888888764 5555554443 42 3332 2 3 3444454454 47788997432
Q ss_pred CCCcccccccCCcEEE
Q 009172 337 TPLNQKALSLGADLVL 352 (541)
Q Consensus 337 ~~~~~~~l~~gaDivv 352 (541)
.--.....+.|+|+++
T Consensus 182 ~eti~~l~~aGaDi~V 197 (223)
T PRK08745 182 ADNIGAIAAAGADTFV 197 (223)
T ss_pred HHHHHHHHHcCCCEEE
Confidence 2111233567999887
No 416
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=49.79 E-value=3.3e+02 Score=28.60 Aligned_cols=133 Identities=16% Similarity=0.133 Sum_probs=74.2
Q ss_pred EEEeCCHH-HHHHHHHHHhcc--CCCEEEEcCCCCcchHHHHH---hhcccC-CcEEEEeCCCCHHHHHHhccCCCeeEE
Q 009172 228 TVIMASGM-SASTVMLLALVP--AGGHIVTTTDCYRKTRIFIE---TVLPKM-GITATVIDPADMEGLEAALNNNNVSLF 300 (541)
Q Consensus 228 ~i~~sSG~-~Ai~~al~all~--~GD~VIv~~~~y~~~~~~~~---~~l~~~-Gi~v~~vd~~dle~Le~ai~~~~tklV 300 (541)
.+..+.|+ +.-.--+..|++ +|-.+|+-+..|+-....++ .+-+.+ .+.+.--+..+.+..+++++.. ...|
T Consensus 98 ~~~vavG~~~~d~er~~~L~~~~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vIaGNV~T~e~a~~Li~aG-AD~v 176 (346)
T PRK05096 98 HVMVSTGTSDADFEKTKQILALSPALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVVTGEMVEELILSG-ADIV 176 (346)
T ss_pred eEEEEecCCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHcC-CCEE
Confidence 34446666 333333444544 56455566667765443332 222223 3444444555778888777653 4444
Q ss_pred E-------EeCCCCCCCcccC----HHHHHHHHHhCCCEEEEEcCCC-CCCcccccccCCcEEEECCccccCCCC
Q 009172 301 F-------TESPTNPFLRCVD----VKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFIGGHN 363 (541)
Q Consensus 301 ~-------lesp~NPtG~v~d----i~~Ia~la~~~gillvvDea~a-~~~~~~~l~~gaDivv~S~sK~lgg~g 363 (541)
- +|+---.+|.=.| +.+.++.|+++|+++|.|.-.- .+-..+.+..|+|.|. +...|+|+-
T Consensus 177 KVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGGi~~sGDI~KAlaaGAd~VM--lGsllAGt~ 249 (346)
T PRK05096 177 KVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAFGGGADFVM--LGGMLAGHE 249 (346)
T ss_pred EEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCCcccccHHHHHHHcCCCEEE--eChhhcCcc
Confidence 2 2222233444444 5577777889999999998633 2334567788999887 344455443
No 417
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed
Probab=49.16 E-value=55 Score=36.05 Aligned_cols=110 Identities=20% Similarity=0.171 Sum_probs=61.9
Q ss_pred HHHhccCCCEEEEcCCCCcchH---HHHHhhcccC-CcEEEEeCCCCHHHHHHhccCCCeeEEEEe-CCC-CCCCc----
Q 009172 242 LLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPT-NPFLR---- 311 (541)
Q Consensus 242 l~all~~GD~VIv~~~~y~~~~---~~~~~~l~~~-Gi~v~~vd~~dle~Le~ai~~~~tklV~le-sp~-NPtG~---- 311 (541)
+..+++.|-.+++-+..|+... ..++.+.+.+ ++.+..-+..+.++...+++-. ...|-+- .|. +-+++
T Consensus 233 a~~L~~agvdvivvD~a~g~~~~vl~~i~~i~~~~p~~~vi~g~v~t~e~a~~l~~aG-ad~i~vg~g~gs~~~~r~~~~ 311 (486)
T PRK05567 233 AEALVEAGVDVLVVDTAHGHSEGVLDRVREIKAKYPDVQIIAGNVATAEAARALIEAG-ADAVKVGIGPGSICTTRIVAG 311 (486)
T ss_pred HHHHHHhCCCEEEEECCCCcchhHHHHHHHHHhhCCCCCEEEeccCCHHHHHHHHHcC-CCEEEECCCCCccccceeecC
Confidence 3445555644555555554322 2233333333 5565555666788887777653 5666441 232 22232
Q ss_pred --ccCHH---HHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEE
Q 009172 312 --CVDVK---LVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVL 352 (541)
Q Consensus 312 --v~di~---~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv 352 (541)
+.++. ++++.++++++.+|.|.=...+. ..+.+.+|+|.++
T Consensus 312 ~g~p~~~~~~~~~~~~~~~~~~viadGGi~~~~di~kAla~GA~~v~ 358 (486)
T PRK05567 312 VGVPQITAIADAAEAAKKYGIPVIADGGIRYSGDIAKALAAGASAVM 358 (486)
T ss_pred CCcCHHHHHHHHHHHhccCCCeEEEcCCCCCHHHHHHHHHhCCCEEE
Confidence 12344 44555667899999998655442 3567788999876
No 418
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=49.14 E-value=1.1e+02 Score=29.94 Aligned_cols=81 Identities=20% Similarity=0.297 Sum_probs=43.0
Q ss_pred hcccCCcEEEEe--CCCCHHHHHHhccCCCeeEEEEeCCCCCC--Cc-ccC--HHHHH---HHHHhCC--CEEEEEcCCC
Q 009172 269 VLPKMGITATVI--DPADMEGLEAALNNNNVSLFFTESPTNPF--LR-CVD--VKLVS---DLCHKKG--AIVCIDGTFA 336 (541)
Q Consensus 269 ~l~~~Gi~v~~v--d~~dle~Le~ai~~~~tklV~lesp~NPt--G~-v~d--i~~Ia---~la~~~g--illvvDea~a 336 (541)
..+..|++.-.. +...++.++..+.. +..|.+.+.+ |. |. ..+ +++|. ++.+++| +++.+|.--.
T Consensus 101 ~ik~~g~k~GlalnP~Tp~~~i~~~l~~--~D~vlvMtV~-PGfgGq~fi~~~lekI~~l~~~~~~~~~~~~I~vdGGI~ 177 (220)
T PRK08883 101 LIKEHGCQAGVVLNPATPLHHLEYIMDK--VDLILLMSVN-PGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGVK 177 (220)
T ss_pred HHHHcCCcEEEEeCCCCCHHHHHHHHHh--CCeEEEEEec-CCCCCceecHhHHHHHHHHHHHHHhcCCCeeEEEECCCC
Confidence 345556654332 34578888887764 5555555443 43 31 222 34444 4444443 7788986432
Q ss_pred CCCcccccccCCcEEE
Q 009172 337 TPLNQKALSLGADLVL 352 (541)
Q Consensus 337 ~~~~~~~l~~gaDivv 352 (541)
..-.....+.|+|+++
T Consensus 178 ~eni~~l~~aGAd~vV 193 (220)
T PRK08883 178 VDNIREIAEAGADMFV 193 (220)
T ss_pred HHHHHHHHHcCCCEEE
Confidence 1111234567899776
No 419
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=47.69 E-value=87 Score=28.48 Aligned_cols=48 Identities=13% Similarity=0.096 Sum_probs=33.4
Q ss_pred HHHHHhccCCCeeEEEEeCC--CCCCCcccCHHHHHHHHHhCCCEEEEEcC
Q 009172 286 EGLEAALNNNNVSLFFTESP--TNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 286 e~Le~ai~~~~tklV~lesp--~NPtG~v~di~~Ia~la~~~gillvvDea 334 (541)
.++.+.|..+++.+|+. .| ..+.+...|...|.+.|-+++++++..-.
T Consensus 65 ~~i~~~I~~g~i~lVIn-t~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l~ 114 (142)
T PRK05234 65 QQIGALIAEGKIDMLIF-FRDPLTAQPHDPDVKALLRLADVWNIPVATNRA 114 (142)
T ss_pred hhHHHHHHcCceeEEEE-ecCCCCCCcccchHHHHHHHHHHcCCCEEcCHH
Confidence 44666676656777665 44 44444456788999999999999986543
No 420
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=47.27 E-value=87 Score=28.69 Aligned_cols=84 Identities=17% Similarity=0.213 Sum_probs=50.6
Q ss_pred CHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcc
Q 009172 233 SGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRC 312 (541)
Q Consensus 233 SG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v 312 (541)
+|.-+- .++..|++.|-+|......-.... . ..++++...|..|++.+.+++.. ...|+...+.++. ..
T Consensus 7 tG~vG~-~l~~~L~~~~~~V~~~~R~~~~~~----~---~~~~~~~~~d~~d~~~~~~al~~--~d~vi~~~~~~~~-~~ 75 (183)
T PF13460_consen 7 TGFVGR-ALAKQLLRRGHEVTALVRSPSKAE----D---SPGVEIIQGDLFDPDSVKAALKG--ADAVIHAAGPPPK-DV 75 (183)
T ss_dssp TSHHHH-HHHHHHHHTTSEEEEEESSGGGHH----H---CTTEEEEESCTTCHHHHHHHHTT--SSEEEECCHSTTT-HH
T ss_pred CChHHH-HHHHHHHHCCCEEEEEecCchhcc----c---ccccccceeeehhhhhhhhhhhh--cchhhhhhhhhcc-cc
Confidence 344442 344556666766654333322211 1 56888888899999999999985 5566654433222 33
Q ss_pred cCHHHHHHHHHhCCC
Q 009172 313 VDVKLVSDLCHKKGA 327 (541)
Q Consensus 313 ~di~~Ia~la~~~gi 327 (541)
...+.+.+.+++.|+
T Consensus 76 ~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 76 DAAKNIIEAAKKAGV 90 (183)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred ccccccccccccccc
Confidence 346677777877664
No 421
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=47.01 E-value=1.5e+02 Score=27.98 Aligned_cols=106 Identities=17% Similarity=0.076 Sum_probs=56.2
Q ss_pred hccCC-CEEEEcCCCCcchHHHHHhhcccCCcEEEE--eCCCCHHHHHHhccCCCeeEEEEeCCCCCCC---cccCHHHH
Q 009172 245 LVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPFL---RCVDVKLV 318 (541)
Q Consensus 245 ll~~G-D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~--vd~~dle~Le~ai~~~~tklV~lesp~NPtG---~v~di~~I 318 (541)
+.+.| |.|++..........-+-..++..|+.+.. ..+.+++++.+++.. ....|.+ .|...++ .....+.+
T Consensus 73 ~~~aGad~i~~h~~~~~~~~~~~i~~~~~~g~~~~v~~~~~~t~~e~~~~~~~-~~d~v~~-~~~~~~~~~~~~~~~~~i 150 (202)
T cd04726 73 AFKAGADIVTVLGAAPLSTIKKAVKAAKKYGKEVQVDLIGVEDPEKRAKLLKL-GVDIVIL-HRGIDAQAAGGWWPEDDL 150 (202)
T ss_pred HHhcCCCEEEEEeeCCHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHC-CCCEEEE-cCcccccccCCCCCHHHH
Confidence 33444 666655433321112122345566877764 456677776666654 2555555 3432222 23446777
Q ss_pred HHHHHhCCCEEEEEcCCCCCCcccccccCCcEEE
Q 009172 319 SDLCHKKGAIVCIDGTFATPLNQKALSLGADLVL 352 (541)
Q Consensus 319 a~la~~~gillvvDea~a~~~~~~~l~~gaDivv 352 (541)
.++.+..++++++|.=-..--.....+.|+|.++
T Consensus 151 ~~~~~~~~~~i~~~GGI~~~~i~~~~~~Gad~vv 184 (202)
T cd04726 151 KKVKKLLGVKVAVAGGITPDTLPEFKKAGADIVI 184 (202)
T ss_pred HHHHhhcCCCEEEECCcCHHHHHHHHhcCCCEEE
Confidence 7777657888998864321111233456888665
No 422
>PRK14057 epimerase; Provisional
Probab=46.47 E-value=1.4e+02 Score=30.08 Aligned_cols=73 Identities=18% Similarity=0.216 Sum_probs=42.0
Q ss_pred EEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCC--Cccc-C-----HHHHHHHHHhCC--CEEEEEcCCCCCCccccccc
Q 009172 277 ATVIDPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV-D-----VKLVSDLCHKKG--AIVCIDGTFATPLNQKALSL 346 (541)
Q Consensus 277 v~~vd~~dle~Le~ai~~~~tklV~lesp~NPt--G~v~-d-----i~~Ia~la~~~g--illvvDea~a~~~~~~~l~~ 346 (541)
+..-+...++.++..+.. +..|.+.+.+ |. |.-. + ++++.++.+++| +.+-+|.-....-.....+.
T Consensus 137 lAlnP~Tp~e~i~~~l~~--vD~VLvMtV~-PGfgGQ~Fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~a 213 (254)
T PRK14057 137 ISLCPATPLDVIIPILSD--VEVIQLLAVN-PGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQ 213 (254)
T ss_pred EEECCCCCHHHHHHHHHh--CCEEEEEEEC-CCCCchhccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHC
Confidence 333345678888888864 5555555543 43 3332 2 344445555554 78899975432222234567
Q ss_pred CCcEEE
Q 009172 347 GADLVL 352 (541)
Q Consensus 347 gaDivv 352 (541)
|+|+++
T Consensus 214 Gad~~V 219 (254)
T PRK14057 214 GIDRVV 219 (254)
T ss_pred CCCEEE
Confidence 999877
No 423
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=46.33 E-value=1.4e+02 Score=26.04 Aligned_cols=58 Identities=14% Similarity=0.169 Sum_probs=36.4
Q ss_pred CCcEEEEeCC---CCHHHHHHhccCCCeeEEEEeCCC--CCCCcccCHHHHHHHHHhCCCEEEE
Q 009172 273 MGITATVIDP---ADMEGLEAALNNNNVSLFFTESPT--NPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 273 ~Gi~v~~vd~---~dle~Le~ai~~~~tklV~lesp~--NPtG~v~di~~Ia~la~~~gillvv 331 (541)
.|+.+..+.. ..-.++.+.+...+..+|+. +|+ .......|...|.+.|-+++++++.
T Consensus 44 ~Gi~v~~vk~~~~~g~~~i~~~i~~g~i~~VIn-t~~~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 44 TGLTVNRMKSGPLGGDQQIGALIAEGEIDAVIF-FRDPLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hCCcEEEEecCCCCchhHHHHHHHcCceeEEEE-cCCCCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 4666555521 12245666776666777654 454 2233255788999999999998874
No 424
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=45.11 E-value=3.1e+02 Score=26.89 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=63.9
Q ss_pred CchhHHHHHHHHHHHhCCCcEEEeCCHH--HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcE--EEEeCCC
Q 009172 208 GNPTTVVVEEKMSALEGAESTVIMASGM--SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGIT--ATVIDPA 283 (541)
Q Consensus 208 ~~p~~~~Le~~LA~l~g~~~~i~~sSG~--~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~--v~~vd~~ 283 (541)
..|..-++-..+++..++..++=..+|+ .++.++ ..+.++.+|+..+..-. .....+..++..|+. +.++..+
T Consensus 52 v~~~~g~~L~~l~~~~~~~~vLEiGt~~G~s~l~la--~~~~~~g~v~tiD~d~~-~~~~A~~n~~~~gl~~~i~~~~gd 128 (234)
T PLN02781 52 VPVDEGLFLSMLVKIMNAKNTLEIGVFTGYSLLTTA--LALPEDGRITAIDIDKE-AYEVGLEFIKKAGVDHKINFIQSD 128 (234)
T ss_pred cCHHHHHHHHHHHHHhCCCEEEEecCcccHHHHHHH--HhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcc
Confidence 3455666777888888888776666554 444332 23444457776654432 233344444555542 4433332
Q ss_pred CHHHHHHhcc---CCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCC
Q 009172 284 DMEGLEAALN---NNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 284 dle~Le~ai~---~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a 336 (541)
-.+.+.+... ..+..+||+...-.+.- .-++.+.++.+ .|.++++|++..
T Consensus 129 a~~~L~~l~~~~~~~~fD~VfiDa~k~~y~--~~~~~~~~ll~-~GG~ii~dn~l~ 181 (234)
T PLN02781 129 ALSALDQLLNNDPKPEFDFAFVDADKPNYV--HFHEQLLKLVK-VGGIIAFDNTLW 181 (234)
T ss_pred HHHHHHHHHhCCCCCCCCEEEECCCHHHHH--HHHHHHHHhcC-CCeEEEEEcCCc
Confidence 2333333321 12467898854321111 11344445554 467889999753
No 425
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=44.46 E-value=1.6e+02 Score=29.60 Aligned_cols=90 Identities=11% Similarity=0.090 Sum_probs=49.1
Q ss_pred HHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCcEEE-EeCC-CCHHHHHHhccCCCeeEEEEeCCCCCCCcc----cC
Q 009172 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITAT-VIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRC----VD 314 (541)
Q Consensus 242 l~all~~G-D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~-~vd~-~dle~Le~ai~~~~tklV~lesp~NPtG~v----~d 314 (541)
+..+.+.| |-|++++..+.....++ ..++..|+... .+.+ .+.+.++..++.. ...||+.+.+..||.- .+
T Consensus 108 ~~~~~~aGvdgviipDlp~ee~~~~~-~~~~~~gl~~i~lv~P~T~~eri~~i~~~~-~gfiy~vs~~G~TG~~~~~~~~ 185 (256)
T TIGR00262 108 YAKCKEVGVDGVLVADLPLEESGDLV-EAAKKHGVKPIFLVAPNADDERLKQIAEKS-QGFVYLVSRAGVTGARNRAASA 185 (256)
T ss_pred HHHHHHcCCCEEEECCCChHHHHHHH-HHHHHCCCcEEEEECCCCCHHHHHHHHHhC-CCCEEEEECCCCCCCcccCChh
Confidence 34444455 67788776654333333 45667787754 3444 3466666655432 2367776666667753 22
Q ss_pred HHHHHHHHHh-CCCEEEEEc
Q 009172 315 VKLVSDLCHK-KGAIVCIDG 333 (541)
Q Consensus 315 i~~Ia~la~~-~gillvvDe 333 (541)
+.+..+..++ .+..+++|-
T Consensus 186 ~~~~i~~lr~~~~~pi~vgf 205 (256)
T TIGR00262 186 LNELVKRLKAYSAKPVLVGF 205 (256)
T ss_pred HHHHHHHHHhhcCCCEEEeC
Confidence 3444444443 366777764
No 426
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Probab=43.70 E-value=3.9e+02 Score=27.70 Aligned_cols=138 Identities=21% Similarity=0.153 Sum_probs=68.2
Q ss_pred HHHHHHHHHHhCCCcEEEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcch---HHHHHhhcccC-CcEEEEeCCCCHHH
Q 009172 213 VVVEEKMSALEGAESTVIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKT---RIFIETVLPKM-GITATVIDPADMEG 287 (541)
Q Consensus 213 ~~Le~~LA~l~g~~~~i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~---~~~~~~~l~~~-Gi~v~~vd~~dle~ 287 (541)
+++++.+.+.-+. -.+....|. .-....+..+++.|=.+|.-+..|+.. ...++.+-+.. .+.+..-...+.+.
T Consensus 70 ~~~~~~i~~vk~~-l~v~~~~~~~~~~~~~~~~l~eagv~~I~vd~~~G~~~~~~~~i~~ik~~~p~v~Vi~G~v~t~~~ 148 (325)
T cd00381 70 EEQAEEVRKVKGR-LLVGAAVGTREDDKERAEALVEAGVDVIVIDSAHGHSVYVIEMIKFIKKKYPNVDVIAGNVVTAEA 148 (325)
T ss_pred HHHHHHHHHhccC-ceEEEecCCChhHHHHHHHHHhcCCCEEEEECCCCCcHHHHHHHHHHHHHCCCceEEECCCCCHHH
Confidence 5566555554432 112222222 111223345566664444444444433 22232222222 25554335567777
Q ss_pred HHHhccCCCeeEEEEe-CCC-C-----CCCccc-C---HHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEEE
Q 009172 288 LEAALNNNNVSLFFTE-SPT-N-----PFLRCV-D---VKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (541)
Q Consensus 288 Le~ai~~~~tklV~le-sp~-N-----PtG~v~-d---i~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDivv 352 (541)
.+.+++.. ...|.+. .|. + .+|.-. . +.++.+.++++++++|.|.=...+ -..+.+..|+|.|.
T Consensus 149 A~~l~~aG-aD~I~vg~g~G~~~~t~~~~g~g~p~~~~i~~v~~~~~~~~vpVIA~GGI~~~~di~kAla~GA~~Vm 224 (325)
T cd00381 149 ARDLIDAG-ADGVKVGIGPGSICTTRIVTGVGVPQATAVADVAAAARDYGVPVIADGGIRTSGDIVKALAAGADAVM 224 (325)
T ss_pred HHHHHhcC-CCEEEECCCCCcCcccceeCCCCCCHHHHHHHHHHHHhhcCCcEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 77777653 6777662 121 0 111112 2 446666677789999988754442 22456678888765
No 427
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=43.61 E-value=1.3e+02 Score=30.25 Aligned_cols=89 Identities=12% Similarity=0.145 Sum_probs=50.5
Q ss_pred HHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCcEEEEe-CCC-CHHHHHHhccCCCeeEEEEeCCCCCCCccc----C
Q 009172 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVI-DPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCV----D 314 (541)
Q Consensus 242 l~all~~G-D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v-d~~-dle~Le~ai~~~~tklV~lesp~NPtG~v~----d 314 (541)
+..+.+.| |-|++++..+.....+. ..++..|+...++ .+. ..+.++...+.. ...||+.+-...||.-. .
T Consensus 112 ~~~~~~aGvdgviipDLP~ee~~~~~-~~~~~~gi~~I~lv~PtT~~eri~~i~~~a-~gFIY~vS~~GvTG~~~~~~~~ 189 (263)
T CHL00200 112 IKKISQAGVKGLIIPDLPYEESDYLI-SVCNLYNIELILLIAPTSSKSRIQKIARAA-PGCIYLVSTTGVTGLKTELDKK 189 (263)
T ss_pred HHHHHHcCCeEEEecCCCHHHHHHHH-HHHHHcCCCEEEEECCCCCHHHHHHHHHhC-CCcEEEEcCCCCCCCCccccHH
Confidence 33334455 67888777665443333 4566777765543 333 456666655432 34777766556677642 2
Q ss_pred HHHHHHHHHhC-CCEEEEE
Q 009172 315 VKLVSDLCHKK-GAIVCID 332 (541)
Q Consensus 315 i~~Ia~la~~~-gillvvD 332 (541)
++++.+..+++ +.++++|
T Consensus 190 ~~~~i~~ir~~t~~Pi~vG 208 (263)
T CHL00200 190 LKKLIETIKKMTNKPIILG 208 (263)
T ss_pred HHHHHHHHHHhcCCCEEEE
Confidence 45555555554 6677775
No 428
>PLN02274 inosine-5'-monophosphate dehydrogenase
Probab=43.34 E-value=1.2e+02 Score=33.76 Aligned_cols=109 Identities=20% Similarity=0.186 Sum_probs=67.1
Q ss_pred HHhccCCCEEEEcCCCCcchHH---HHHhhcccC-CcEEEEeCCCCHHHHHHhccCCCeeEEEEeC-CC----CC--C--
Q 009172 243 LALVPAGGHIVTTTDCYRKTRI---FIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTES-PT----NP--F-- 309 (541)
Q Consensus 243 ~all~~GD~VIv~~~~y~~~~~---~~~~~l~~~-Gi~v~~vd~~dle~Le~ai~~~~tklV~les-p~----NP--t-- 309 (541)
..|++.|-.||+-+..|+-... .++.+-+.+ +..+..-+..+.++-+.+++.. ..+|.+.. +. ++ +
T Consensus 254 ~~l~~ag~d~i~iD~~~g~~~~~~~~i~~ik~~~p~~~vi~g~v~t~e~a~~a~~aG-aD~i~vg~g~G~~~~t~~~~~~ 332 (505)
T PLN02274 254 EHLVKAGVDVVVLDSSQGDSIYQLEMIKYIKKTYPELDVIGGNVVTMYQAQNLIQAG-VDGLRVGMGSGSICTTQEVCAV 332 (505)
T ss_pred HHHHHcCCCEEEEeCCCCCcHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHcC-cCEEEECCCCCccccCcccccc
Confidence 4556677666666667765443 333333333 4555544667888888887763 66776521 11 11 2
Q ss_pred Cc--ccCHHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEEE
Q 009172 310 LR--CVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (541)
Q Consensus 310 G~--v~di~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDivv 352 (541)
|. ..++..+.+++++.+++||.|.-...+ -..+.+..|+|.|+
T Consensus 333 g~~~~~~i~~~~~~~~~~~vpVIadGGI~~~~di~kAla~GA~~V~ 378 (505)
T PLN02274 333 GRGQATAVYKVASIAAQHGVPVIADGGISNSGHIVKALTLGASTVM 378 (505)
T ss_pred CCCcccHHHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 22 225778889999999999999875543 23566788998765
No 429
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=43.13 E-value=2.5e+02 Score=28.20 Aligned_cols=44 Identities=14% Similarity=0.116 Sum_probs=31.4
Q ss_pred CeeEEEEe-C---CCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCC
Q 009172 296 NVSLFFTE-S---PTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 296 ~tklV~le-s---p~NPtG~v~di~~Ia~la~~~gillvvDea~a~~~ 339 (541)
+.++++++ - -.+++-...|+..|..+.+..+.+|++|-++..+.
T Consensus 150 n~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 150 KSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 34677776 1 12344447889888888887899999999977653
No 430
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=42.12 E-value=1.1e+02 Score=24.09 Aligned_cols=53 Identities=13% Similarity=0.131 Sum_probs=30.1
Q ss_pred CcEEEEeCCCCHHHHH--HhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009172 274 GITATVIDPADMEGLE--AALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 274 Gi~v~~vd~~dle~Le--~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvv 331 (541)
|.++..++.......+ ..++++ .-+|++ +..|...++.++++.++++|+.+|.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~-d~~i~i----S~sg~t~~~~~~~~~a~~~g~~ii~ 79 (87)
T cd04795 25 GIEVVALIATELEHASLLSLLRKG-DVVIAL----SYSGRTEELLAALEIAKELGIPVIA 79 (87)
T ss_pred CCceEEeCCcHHHHHHHHhcCCCC-CEEEEE----ECCCCCHHHHHHHHHHHHcCCeEEE
Confidence 6666555433322222 333442 344444 2346666788889999999887653
No 431
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=41.43 E-value=1.7e+02 Score=25.01 Aligned_cols=84 Identities=14% Similarity=0.126 Sum_probs=51.0
Q ss_pred HHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC--CCEEEEEcCCCCCCc
Q 009172 264 IFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK--GAIVCIDGTFATPLN 340 (541)
Q Consensus 264 ~~~~~~l~~~Gi~v~~vd~~-dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~--gillvvDea~a~~~~ 340 (541)
..+...++..|.++.+.... ..+.+.+.+...++++|.+..-. +.....++.+.++.+++ ++.+++=..+.+..+
T Consensus 17 ~~~~~~l~~~G~~v~~l~~~~~~~~~~~~i~~~~pdiV~iS~~~--~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~t~~~ 94 (125)
T cd02065 17 NIVAIALRDNGFEVIDLGVDVPPEEIVEAAKEEDADVVGLSALS--TTHMEAMKLVIEALKELGIDIPVVVGGAHPTADP 94 (125)
T ss_pred HHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEEecch--HhHHHHHHHHHHHHHhcCCCCeEEEeCCcCCccc
Confidence 33445677889999887643 45666666654467888884322 12224466666776766 588888776555443
Q ss_pred ccccccCCcEEE
Q 009172 341 QKALSLGADLVL 352 (541)
Q Consensus 341 ~~~l~~gaDivv 352 (541)
.. ...|+++
T Consensus 95 ~~---~~~d~~~ 103 (125)
T cd02065 95 EE---PKVDAVV 103 (125)
T ss_pred cc---cccceee
Confidence 32 3456655
No 432
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=40.56 E-value=1.1e+02 Score=33.86 Aligned_cols=111 Identities=16% Similarity=0.151 Sum_probs=65.7
Q ss_pred HHHHhccCCCEEEEcCCCCcchH---HHHHhhcccC-CcEEEEeCCCCHHHHHHhccCCCeeEEEEe-CCCC------CC
Q 009172 241 MLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PF 309 (541)
Q Consensus 241 al~all~~GD~VIv~~~~y~~~~---~~~~~~l~~~-Gi~v~~vd~~dle~Le~ai~~~~tklV~le-sp~N------Pt 309 (541)
.+.++++.|-.+|.-+..|+-+. ..++.+-+.+ ++.+..-+..+.++.+.+++-. ...|.+. .|.. .+
T Consensus 245 ~~~~l~~ag~d~i~id~a~G~s~~~~~~i~~ik~~~~~~~v~aG~V~t~~~a~~~~~aG-ad~I~vg~g~Gs~~~t~~~~ 323 (495)
T PTZ00314 245 RAAALIEAGVDVLVVDSSQGNSIYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDAG-ADGLRIGMGSGSICITQEVC 323 (495)
T ss_pred HHHHHHHCCCCEEEEecCCCCchHHHHHHHHHHhhCCCceEEECCcCCHHHHHHHHHcC-CCEEEECCcCCcccccchhc
Confidence 34556777866666666665333 2343333333 3444433556788888887764 6777652 1221 01
Q ss_pred Ccc----cCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEE
Q 009172 310 LRC----VDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVL 352 (541)
Q Consensus 310 G~v----~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv 352 (541)
|.- ..+.++.++|+++|+++|.|.-..++. ..+.+.+|+|.|+
T Consensus 324 ~~g~p~~~ai~~~~~~~~~~~v~vIadGGi~~~~di~kAla~GA~~Vm 371 (495)
T PTZ00314 324 AVGRPQASAVYHVARYARERGVPCIADGGIKNSGDICKALALGADCVM 371 (495)
T ss_pred cCCCChHHHHHHHHHHHhhcCCeEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 111 124577788889999999998655442 3466788999876
No 433
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=39.97 E-value=1.4e+02 Score=31.22 Aligned_cols=131 Identities=17% Similarity=0.231 Sum_probs=79.2
Q ss_pred HHHHHHHHHhccCCCEEE-EcCCCCcc-hHHHHHhhcccCCcEEEEeC-CCCH-----HHHHHhccCCCeeEEEEeCCC-
Q 009172 236 SASTVMLLALVPAGGHIV-TTTDCYRK-TRIFIETVLPKMGITATVID-PADM-----EGLEAALNNNNVSLFFTESPT- 306 (541)
Q Consensus 236 ~Ai~~al~all~~GD~VI-v~~~~y~~-~~~~~~~~l~~~Gi~v~~vd-~~dl-----e~Le~ai~~~~tklV~lesp~- 306 (541)
..+.-+..-+.+.|-.|+ ....+|.+ ....+....++.|+++.--. ..|+ ++++.+..+ +..+|++.+..
T Consensus 154 TTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar-~~DvvliDTAGR 232 (340)
T COG0552 154 TTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKAR-GIDVVLIDTAGR 232 (340)
T ss_pred hHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHc-CCCEEEEeCccc
Confidence 455555555667776654 45566654 22334445677888876532 3454 567777766 48899998754
Q ss_pred --CCCCcccCHHHHHHHHHhCC------CEEEEEcCCCCCCccc--cc--ccCCcEEEECCccccCCCCCceEEEEEe
Q 009172 307 --NPFLRCVDVKLVSDLCHKKG------AIVCIDGTFATPLNQK--AL--SLGADLVLHSATKFIGGHNDVLAGSISG 372 (541)
Q Consensus 307 --NPtG~v~di~~Ia~la~~~g------illvvDea~a~~~~~~--~l--~~gaDivv~S~sK~lgg~g~v~gG~vv~ 372 (541)
|-..-.-.+++|.+++++.. ++++.|.+.+.-...+ .+ ..+.|-++ +||.=|. ..||+++.
T Consensus 233 Lhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiI--lTKlDgt---AKGG~il~ 305 (340)
T COG0552 233 LHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGII--LTKLDGT---AKGGIILS 305 (340)
T ss_pred ccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEE--EEecccC---CCcceeee
Confidence 54555556888888888754 7788899965422111 11 23455555 6786543 25787764
No 434
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=39.59 E-value=2.8e+02 Score=28.49 Aligned_cols=104 Identities=11% Similarity=0.092 Sum_probs=53.4
Q ss_pred HhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEcC--CCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCe
Q 009172 222 LEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV 297 (541)
Q Consensus 222 l~g~~~~i~~sSG~~Ai~~al~all~~GD--~VIv~~--~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~t 297 (541)
+....+.|++-+.+..+...|....+.|. +|++.+ |.+.| +.+. ..+...|++++++... .+-..+.+ +
T Consensus 112 ~i~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G-~~~a-~~L~~~gI~vtlI~Ds---a~~~~m~~--v 184 (301)
T TIGR00511 112 RIRDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQG-HITA-KELRDYGIPVTLIVDS---AVRYFMKE--V 184 (301)
T ss_pred HcCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchH-HHHH-HHHHHCCCCEEEEehh---HHHHHHHh--C
Confidence 33334566665545434444444433443 555543 44444 3333 4566779999887532 22223332 4
Q ss_pred eEEEEeC-CCCCCCcccC---HHHHHHHHHhCCCEEEEE
Q 009172 298 SLFFTES-PTNPFLRCVD---VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 298 klV~les-p~NPtG~v~d---i~~Ia~la~~~gillvvD 332 (541)
..|++-. ---..|.+.. -..++-+|+.++++++|=
T Consensus 185 d~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~ 223 (301)
T TIGR00511 185 DHVVVGADAITANGALINKIGTSQLALAAREARVPFMVA 223 (301)
T ss_pred CEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEE
Confidence 4555411 1122344433 236777889999988863
No 435
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=39.03 E-value=2.7e+02 Score=28.73 Aligned_cols=103 Identities=12% Similarity=0.116 Sum_probs=53.6
Q ss_pred HhCCCcEEEeCCHHHHHHHHHHHhccCC--CEEEEcC--CCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCe
Q 009172 222 LEGAESTVIMASGMSASTVMLLALVPAG--GHIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV 297 (541)
Q Consensus 222 l~g~~~~i~~sSG~~Ai~~al~all~~G--D~VIv~~--~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~t 297 (541)
+....+.|++-+.+..+...|....+.| -+|++.+ |...| ..+. ..+...|++++.+..... -..+. ++
T Consensus 117 ~i~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G-~~~a-~~L~~~GI~vtlI~Dsav---~~~m~--~v 189 (310)
T PRK08535 117 RIRDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQG-HITA-KELAEYGIPVTLIVDSAV---RYFMK--DV 189 (310)
T ss_pred HcCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhH-HHHH-HHHHHCCCCEEEEehhHH---HHHHH--hC
Confidence 3333456666554544444444444444 3555543 33444 3333 456677999988753322 22332 24
Q ss_pred eEEEEeC-CCCCCCcccC---HHHHHHHHHhCCCEEEE
Q 009172 298 SLFFTES-PTNPFLRCVD---VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 298 klV~les-p~NPtG~v~d---i~~Ia~la~~~gillvv 331 (541)
..|++-. ---..|.+.. -..++-+|+.++++++|
T Consensus 190 d~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 190 DKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMV 227 (310)
T ss_pred CEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEE
Confidence 5555511 1123354443 23677788999998886
No 436
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=38.86 E-value=95 Score=31.13 Aligned_cols=93 Identities=16% Similarity=0.243 Sum_probs=52.0
Q ss_pred EEeCCHH-HHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCC
Q 009172 229 VIMASGM-SASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTN 307 (541)
Q Consensus 229 i~~sSG~-~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~N 307 (541)
|++-+|+ +|..++=.-...+++.++++...|+.. .+...+. ++.....+.+.|.+.++++++++|+ -.++
T Consensus 5 ilvlGGT~Dar~la~~L~~~~~~~~~ss~t~~g~~------l~~~~~~-~~~~G~l~~e~l~~~l~e~~i~llI--DATH 75 (257)
T COG2099 5 ILLLGGTSDARALAKKLAAAPVDIILSSLTGYGAK------LAEQIGP-VRVGGFLGAEGLAAFLREEGIDLLI--DATH 75 (257)
T ss_pred EEEEeccHHHHHHHHHhhccCccEEEEEccccccc------chhccCC-eeecCcCCHHHHHHHHHHcCCCEEE--ECCC
Confidence 4444666 665444332234568888888888773 2333333 3334455777787777766566554 2344
Q ss_pred CCCcccCHHHHHHHHHhCCCEEEE
Q 009172 308 PFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 308 PtG~v~di~~Ia~la~~~gillvv 331 (541)
|.-.... +-..++|++.|++.+.
T Consensus 76 PyAa~iS-~Na~~aake~gipy~r 98 (257)
T COG2099 76 PYAARIS-QNAARAAKETGIPYLR 98 (257)
T ss_pred hHHHHHH-HHHHHHHHHhCCcEEE
Confidence 5433322 2344677777776654
No 437
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=38.80 E-value=1.3e+02 Score=24.66 Aligned_cols=43 Identities=12% Similarity=0.078 Sum_probs=28.0
Q ss_pred HHHHHhccCCCeeEEEEeCCCCCCCc--ccCHHHHHHHHHhCCCEEE
Q 009172 286 EGLEAALNNNNVSLFFTESPTNPFLR--CVDVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 286 e~Le~ai~~~~tklV~lesp~NPtG~--v~di~~Ia~la~~~gillv 330 (541)
..+.+.+...++.+|+. +|. +.+. ..|-..|.+.|-+++++++
T Consensus 45 ~~i~~~i~~g~id~VIn-~~~-~~~~~~~~d~~~iRr~A~~~~Ip~~ 89 (90)
T smart00851 45 LAILDLIKNGEIDLVIN-TLY-PLGAQPHEDGKALRRAAENIDIPGA 89 (90)
T ss_pred HHHHHHhcCCCeEEEEE-CCC-cCcceeccCcHHHHHHHHHcCCCee
Confidence 34666676666777765 443 2222 3356689999999998875
No 438
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=38.73 E-value=1.7e+02 Score=30.67 Aligned_cols=117 Identities=14% Similarity=0.093 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhC--C--CcEEE-eCCHHHHHHHHHHHhccCCCEE--EEcCCCCcchH--HHHHhhcccCCcEEEEeCC
Q 009172 212 TVVVEEKMSALEG--A--ESTVI-MASGMSASTVMLLALVPAGGHI--VTTTDCYRKTR--IFIETVLPKMGITATVIDP 282 (541)
Q Consensus 212 ~~~Le~~LA~l~g--~--~~~i~-~sSG~~Ai~~al~all~~GD~V--Iv~~~~y~~~~--~~~~~~l~~~Gi~v~~vd~ 282 (541)
..+|++.+.++-+ . -++++ +++|-.+..++....-.-|..+ ++-++.+..-. ..++.+++.+|++...+..
T Consensus 42 ~~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~ 121 (343)
T TIGR03573 42 EKELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI 121 (343)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC
Confidence 3456655555432 2 34554 5556543333211111224433 34455554321 2355667778988877654
Q ss_pred CCHHHHHHhccCCCeeEEEEeCCCCCCCcc--cCHHHHHHHHHhCCCEEEEEcCC
Q 009172 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRC--VDVKLVSDLCHKKGAIVCIDGTF 335 (541)
Q Consensus 283 ~dle~Le~ai~~~~tklV~lesp~NPtG~v--~di~~Ia~la~~~gillvvDea~ 335 (541)
+.+.+....... .+ ...+|...+ .-...+.++|+++|+.+|+....
T Consensus 122 -d~~~~~~l~~~~-~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~~ 169 (343)
T TIGR03573 122 -NPETFRKLQRAY-FK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGEN 169 (343)
T ss_pred -CHHHHHHHHHHH-Hh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCCC
Confidence 344443333211 11 223343222 22568889999999999988763
No 439
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=38.53 E-value=2.3e+02 Score=29.99 Aligned_cols=80 Identities=23% Similarity=0.220 Sum_probs=49.4
Q ss_pred cccCCcEEEEeCC--CCHHHHHHhcc----CCCeeEEEEe-CCCC---CCCcccCHHHHHHHHHhCCCEEEEEcCCCCC-
Q 009172 270 LPKMGITATVIDP--ADMEGLEAALN----NNNVSLFFTE-SPTN---PFLRCVDVKLVSDLCHKKGAIVCIDGTFATP- 338 (541)
Q Consensus 270 l~~~Gi~v~~vd~--~dle~Le~ai~----~~~tklV~le-sp~N---PtG~v~di~~Ia~la~~~gillvvDea~a~~- 338 (541)
+...|..|..-.. .++++++.+++ ..+.++++++ ..++ ++-..+|+..|..+-+.++++|++|-++..+
T Consensus 221 ~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G~ 300 (360)
T PRK12595 221 AGRVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTGR 300 (360)
T ss_pred HHccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCcc
Confidence 3445666654443 36666665552 2234677776 2222 2234468999998888899999999998765
Q ss_pred --Cc----ccccccCCc
Q 009172 339 --LN----QKALSLGAD 349 (541)
Q Consensus 339 --~~----~~~l~~gaD 349 (541)
+. ......|+|
T Consensus 301 r~~~~~~a~aAva~GAd 317 (360)
T PRK12595 301 RDLLLPTAKAALAIGAD 317 (360)
T ss_pred hhhHHHHHHHHHHcCCC
Confidence 21 123456777
No 440
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional
Probab=38.37 E-value=2.6e+02 Score=30.01 Aligned_cols=83 Identities=16% Similarity=0.136 Sum_probs=44.3
Q ss_pred hhcccCCcEEEE--eCCCCH-HHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHH-hCCCEEEEEcCCCCCCcccc
Q 009172 268 TVLPKMGITATV--IDPADM-EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH-KKGAIVCIDGTFATPLNQKA 343 (541)
Q Consensus 268 ~~l~~~Gi~v~~--vd~~dl-e~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~-~~gillvvDea~a~~~~~~~ 343 (541)
...+..|+.+.. +.+.++ +.++.. .. .+..|.+.+--+|.+.-...+.|.++.+ ..++.+.+|.--...-....
T Consensus 270 ~~akk~GikvgVD~lnp~tp~e~i~~l-~~-~vD~Vllht~vdp~~~~~~~~kI~~ikk~~~~~~I~VdGGI~~eti~~l 347 (391)
T PRK13307 270 HEAQKTGIYSILDMLNVEDPVKLLESL-KV-KPDVVELHRGIDEEGTEHAWGNIKEIKKAGGKILVAVAGGVRVENVEEA 347 (391)
T ss_pred HHHHHcCCEEEEEEcCCCCHHHHHHHh-hC-CCCEEEEccccCCCcccchHHHHHHHHHhCCCCcEEEECCcCHHHHHHH
Confidence 446677877653 233344 444443 33 3677777554555544334555555444 34678899863221111233
Q ss_pred cccCCcEEE
Q 009172 344 LSLGADLVL 352 (541)
Q Consensus 344 l~~gaDivv 352 (541)
...|+|+++
T Consensus 348 ~~aGADivV 356 (391)
T PRK13307 348 LKAGADILV 356 (391)
T ss_pred HHcCCCEEE
Confidence 467888776
No 441
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=37.57 E-value=1.2e+02 Score=27.39 Aligned_cols=61 Identities=11% Similarity=0.172 Sum_probs=41.0
Q ss_pred HHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC
Q 009172 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (541)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~ 325 (541)
..++..+++..|.++.+.-.+ .++++.+++.+.++.+|.+..... .....++++.+.+++.
T Consensus 20 ~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 20 NKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYG--HGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccc--cCHHHHHHHHHHHHhc
Confidence 344555678889999988654 578887777665688988844332 2334566777777765
No 442
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated
Probab=37.31 E-value=1.4e+02 Score=32.18 Aligned_cols=111 Identities=15% Similarity=0.135 Sum_probs=62.9
Q ss_pred HHHHhccCCCEEEEcCCCCcchH---HHHHhhcccC-CcEEEEeCCCCHHHHHHhccCCCeeEEEEe-CCCC------CC
Q 009172 241 MLLALVPAGGHIVTTTDCYRKTR---IFIETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN------PF 309 (541)
Q Consensus 241 al~all~~GD~VIv~~~~y~~~~---~~~~~~l~~~-Gi~v~~vd~~dle~Le~ai~~~~tklV~le-sp~N------Pt 309 (541)
-+..+++.|-.||+-+..++... .+++.+-+.+ ++.+..-+..+.+..+.+++-. ..+|.+- .|.. .+
T Consensus 157 ~v~~lv~aGvDvI~iD~a~g~~~~~~~~v~~ik~~~p~~~vi~g~V~T~e~a~~l~~aG-aD~I~vG~g~Gs~c~tr~~~ 235 (404)
T PRK06843 157 RVEELVKAHVDILVIDSAHGHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVG-ADCLKVGIGPGSICTTRIVA 235 (404)
T ss_pred HHHHHHhcCCCEEEEECCCCCChhHHHHHHHHHhhCCCCcEEEEecCCHHHHHHHHHcC-CCEEEECCCCCcCCcceeec
Confidence 34556677866666555554322 2233332223 3444444666788777777653 5666542 1211 12
Q ss_pred Ccc-cC---HHHHHHHHHhCCCEEEEEcCCCCC-CcccccccCCcEEE
Q 009172 310 LRC-VD---VKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (541)
Q Consensus 310 G~v-~d---i~~Ia~la~~~gillvvDea~a~~-~~~~~l~~gaDivv 352 (541)
|.- .+ +..+.+++++.+++||.|.=...+ -..+.+.+|+|.|+
T Consensus 236 g~g~p~ltai~~v~~~~~~~~vpVIAdGGI~~~~Di~KALalGA~aVm 283 (404)
T PRK06843 236 GVGVPQITAICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 (404)
T ss_pred CCCCChHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 321 22 445677777889999999865443 23567788999776
No 443
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=36.46 E-value=2.8e+02 Score=26.46 Aligned_cols=89 Identities=16% Similarity=0.124 Sum_probs=54.8
Q ss_pred HHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC----CCEEEEEcCCCC
Q 009172 263 RIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK----GAIVCIDGTFAT 337 (541)
Q Consensus 263 ~~~~~~~l~~~Gi~v~~vd~~-dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~----gillvvDea~a~ 337 (541)
..++..+++..|.++.+...+ .++++.+++.+.++.+|.+..-. +.....+.++.+..++. ++.+++=.....
T Consensus 99 ~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~--~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~ 176 (201)
T cd02070 99 KNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALM--TTTMGGMKEVIEALKEAGLRDKVKVMVGGAPVN 176 (201)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHCCCCcCCeEEEECCcCC
Confidence 345556788899999877543 67888887766668888884333 22345677777777765 456766443211
Q ss_pred CCcccccccCCcEEEECC
Q 009172 338 PLNQKALSLGADLVLHSA 355 (541)
Q Consensus 338 ~~~~~~l~~gaDivv~S~ 355 (541)
. .-....|+|.+..+.
T Consensus 177 ~--~~~~~~GaD~~~~da 192 (201)
T cd02070 177 Q--EFADEIGADGYAEDA 192 (201)
T ss_pred H--HHHHHcCCcEEECCH
Confidence 1 112245777766443
No 444
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=36.25 E-value=1.6e+02 Score=22.67 Aligned_cols=59 Identities=15% Similarity=0.229 Sum_probs=34.8
Q ss_pred hhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEE
Q 009172 268 TVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 268 ~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvD 332 (541)
.+++..|+++..+... .+.++. . +..+|++ .|.-....-.++++|.++.++=|-++|+|
T Consensus 12 ~~L~~~g~~v~~~~~~-~~~l~~---~-~~tll~i-~~~~~~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 12 QLLEEQGVKVERWRKP-YEALEA---D-DGTLLVI-GPDLRLSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHCCCeeEEeccc-HHHhCC---C-CCEEEEE-eCCCCCCchHHHHHHHHHHHcCCEEEEeC
Confidence 5667779998876542 444432 2 3456665 34411111245778989888767677664
No 445
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=35.66 E-value=4.2e+02 Score=27.37 Aligned_cols=103 Identities=13% Similarity=0.054 Sum_probs=57.7
Q ss_pred HhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEc--CCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCe
Q 009172 222 LEGAESTVIMASGMSASTVMLLALVPAGG--HIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNV 297 (541)
Q Consensus 222 l~g~~~~i~~sSG~~Ai~~al~all~~GD--~VIv~--~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~t 297 (541)
+....+.|++-+-+.++..++....+.|. +|++. .|.+.+ ..+...++..|+++..+.. .++-..++. +
T Consensus 116 ~i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG--~~~ak~L~~~gI~~~~I~D---sa~~~~~~~--v 188 (301)
T COG1184 116 RIHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEG--RIMAKELRQSGIPVTVIVD---SAVGAFMSR--V 188 (301)
T ss_pred hccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchH--HHHHHHHHHcCCceEEEec---hHHHHHHHh--C
Confidence 33334677777767666666666666665 55554 456655 2344567888998887642 222333332 4
Q ss_pred eEEEEeCCC-CCCCcccC---HHHHHHHHHhCCCEEEE
Q 009172 298 SLFFTESPT-NPFLRCVD---VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 298 klV~lesp~-NPtG~v~d---i~~Ia~la~~~gillvv 331 (541)
..|++-.=. --.|.+.. -.-|+..||++++++++
T Consensus 189 d~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 189 DKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred CEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 444441110 11233332 34778889999998775
No 446
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=35.06 E-value=3.9e+02 Score=27.53 Aligned_cols=79 Identities=9% Similarity=0.031 Sum_probs=43.6
Q ss_pred CEEEEc--CCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCC-CCCCCcccC---HHHHHHHHH
Q 009172 250 GHIVTT--TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP-TNPFLRCVD---VKLVSDLCH 323 (541)
Q Consensus 250 D~VIv~--~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp-~NPtG~v~d---i~~Ia~la~ 323 (541)
-+|++. +|.+.+..... ..+...|++++++.. ..+-..+...++..|++-.= --..|.+.. --.++-+|+
T Consensus 153 ~~V~v~EsrP~~~G~~~~a-~~L~~~gI~vtlI~D---sa~~~~m~~~~vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak 228 (303)
T TIGR00524 153 IRVIACETRPRNQGSRLTA-WELMQDGIDVTLITD---SMAAYFMQKGEIDAVIVGADRIARNGDVANKIGTYQLAVLAK 228 (303)
T ss_pred eEEEECCCCCccchHHHHH-HHHHHCCCCEEEECh---hHHHHHccccCCCEEEEcccEEecCCCEeEhhhHHHHHHHHH
Confidence 356655 45555534333 346667999988753 23333443223566665211 123343333 236777889
Q ss_pred hCCCEEEEE
Q 009172 324 KKGAIVCID 332 (541)
Q Consensus 324 ~~gillvvD 332 (541)
.+++++++=
T Consensus 229 ~~~vPv~V~ 237 (303)
T TIGR00524 229 EFRIPFFVA 237 (303)
T ss_pred HhCCCEEEe
Confidence 999988863
No 447
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=35.04 E-value=1.1e+02 Score=30.63 Aligned_cols=39 Identities=15% Similarity=0.279 Sum_probs=24.9
Q ss_pred CCeeEEEEeCCCCCC-----C--cccC--------HHHHHHHHHhCCCEEEEEc
Q 009172 295 NNVSLFFTESPTNPF-----L--RCVD--------VKLVSDLCHKKGAIVCIDG 333 (541)
Q Consensus 295 ~~tklV~lesp~NPt-----G--~v~d--------i~~Ia~la~~~gillvvDe 333 (541)
+++++|++.+...+. | .... ...|..+|++|++.||+=|
T Consensus 132 ~~ikLIVIDSIaalfr~e~~~~~~~~~R~~~L~~~~~~L~~lA~~~~iaVvvTN 185 (256)
T PF08423_consen 132 SKIKLIVIDSIAALFRSEFSGRGDLAERQRMLARLARILKRLARKYNIAVVVTN 185 (256)
T ss_dssp SCEEEEEEETSSHHHHHHSGSTTTHHHHHHHHHHHHHHHHHHHHHTT-EEEEEE
T ss_pred cceEEEEecchHHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHhCCceEEeec
Confidence 469999999988542 1 1111 2257778889998777644
No 448
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=34.83 E-value=1.5e+02 Score=29.55 Aligned_cols=76 Identities=13% Similarity=0.112 Sum_probs=44.4
Q ss_pred HHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccC----CC-eeEEEEeCCCCCCCcccCHHH
Q 009172 243 LALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNN----NN-VSLFFTESPTNPFLRCVDVKL 317 (541)
Q Consensus 243 ~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~----~~-tklV~lesp~NPtG~v~di~~ 317 (541)
..|++.|.+|.+..-.-.. ....++++...|..|++.|.++++. .. ...|++..|..+ ........
T Consensus 17 ~~L~~~g~~V~~~~R~~~~--------~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~-~~~~~~~~ 87 (285)
T TIGR03649 17 RLLQAASVPFLVASRSSSS--------SAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP-DLAPPMIK 87 (285)
T ss_pred HHHHhCCCcEEEEeCCCcc--------ccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC-ChhHHHHH
Confidence 4456667665543222111 1123566666788899999888831 12 567776665422 22334567
Q ss_pred HHHHHHhCCC
Q 009172 318 VSDLCHKKGA 327 (541)
Q Consensus 318 Ia~la~~~gi 327 (541)
+.+.|++.|+
T Consensus 88 ~i~aa~~~gv 97 (285)
T TIGR03649 88 FIDFARSKGV 97 (285)
T ss_pred HHHHHHHcCC
Confidence 8888888887
No 449
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=34.70 E-value=18 Score=30.15 Aligned_cols=78 Identities=17% Similarity=0.137 Sum_probs=41.6
Q ss_pred HhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEe----CCC-CHH---HHHHhccCCCeeEEEEeCCCCCCCccc-C
Q 009172 244 ALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVI----DPA-DME---GLEAALNNNNVSLFFTESPTNPFLRCV-D 314 (541)
Q Consensus 244 all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~v----d~~-dle---~Le~ai~~~~tklV~lesp~NPtG~v~-d 314 (541)
.|.+-|=+|+.+. +|. ..++..|+++..+ ... .++ ++.+.++.+++.+|+. +|..-..... |
T Consensus 8 ~l~~lG~~i~AT~----gTa----~~L~~~Gi~~~~v~~~~~~~~~~~g~~~i~~~i~~~~IdlVIn-~~~~~~~~~~~d 78 (95)
T PF02142_consen 8 RLAELGFEIYATE----GTA----KFLKEHGIEVTEVVNKIGEGESPDGRVQIMDLIKNGKIDLVIN-TPYPFSDQEHTD 78 (95)
T ss_dssp HHHHTTSEEEEEH----HHH----HHHHHTT--EEECCEEHSTG-GGTHCHHHHHHHHTTSEEEEEE-E--THHHHHTHH
T ss_pred HHHHCCCEEEECh----HHH----HHHHHcCCCceeeeeecccCccCCchhHHHHHHHcCCeEEEEE-eCCCCcccccCC
Confidence 3444565666543 333 2344567773333 111 112 2666777667887665 4543222333 6
Q ss_pred HHHHHHHHHhCCCEEE
Q 009172 315 VKLVSDLCHKKGAIVC 330 (541)
Q Consensus 315 i~~Ia~la~~~gillv 330 (541)
-..|.+.|-+++++++
T Consensus 79 g~~irr~a~~~~Ip~~ 94 (95)
T PF02142_consen 79 GYKIRRAAVEYNIPLF 94 (95)
T ss_dssp HHHHHHHHHHTTSHEE
T ss_pred cHHHHHHHHHcCCCCc
Confidence 7799999999998765
No 450
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=34.57 E-value=2.5e+02 Score=27.70 Aligned_cols=81 Identities=14% Similarity=0.234 Sum_probs=45.4
Q ss_pred hcccCCcEEEE--eCCCCHHHHHHhccCCCeeEEEEeCCCCCC--Cccc-C-----HHHHHHHHHhCC--CEEEEEcCCC
Q 009172 269 VLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNPF--LRCV-D-----VKLVSDLCHKKG--AIVCIDGTFA 336 (541)
Q Consensus 269 ~l~~~Gi~v~~--vd~~dle~Le~ai~~~~tklV~lesp~NPt--G~v~-d-----i~~Ia~la~~~g--illvvDea~a 336 (541)
..+..|+++-. -+..+++.++..+.. +..|.+.+.+ |. |.-. + ++++.++.+++| +.+-+|.--.
T Consensus 103 ~Ik~~G~kaGlalnP~T~~~~l~~~l~~--vD~VLvMsV~-PGf~GQ~fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~ 179 (229)
T PRK09722 103 EIRRAGMKVGLVLNPETPVESIKYYIHL--LDKITVMTVD-PGFAGQPFIPEMLDKIAELKALRERNGLEYLIEVDGSCN 179 (229)
T ss_pred HHHHcCCCEEEEeCCCCCHHHHHHHHHh--cCEEEEEEEc-CCCcchhccHHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 34555655433 244678888888864 5566555543 43 3332 2 334444545554 7789997532
Q ss_pred CCCcccccccCCcEEE
Q 009172 337 TPLNQKALSLGADLVL 352 (541)
Q Consensus 337 ~~~~~~~l~~gaDivv 352 (541)
..-.....+.|+|+++
T Consensus 180 ~~~i~~~~~aGad~~V 195 (229)
T PRK09722 180 QKTYEKLMEAGADVFI 195 (229)
T ss_pred HHHHHHHHHcCCCEEE
Confidence 2111234567999887
No 451
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=34.06 E-value=3.9e+02 Score=27.16 Aligned_cols=105 Identities=21% Similarity=0.213 Sum_probs=54.0
Q ss_pred HHHhCCCcEEEeCCHHHHHHHHHHHhccCCC--EEEEcC--CCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCC
Q 009172 220 SALEGAESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNN 295 (541)
Q Consensus 220 A~l~g~~~~i~~sSG~~Ai~~al~all~~GD--~VIv~~--~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~ 295 (541)
+++....+.|++-+.+.....+|....+.|. +|++.+ |.+.|.. + ...+...|++++.+.......+ +.+
T Consensus 104 ~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~-l-a~eL~~~GI~vtlI~Dsa~~~~---m~~- 177 (275)
T PRK08335 104 SELIDDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLA-L-ANELEFLGIEFEVITDAQLGLF---AKE- 177 (275)
T ss_pred HHHcCCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHH-H-HHHHHHCCCCEEEEeccHHHHH---HHh-
Confidence 3444434566665544333344444444453 566554 5555533 3 3456677999988753333332 221
Q ss_pred CeeEEEEeC-CCCCCCcccC---HHHHHHHHHhCCCEEEE
Q 009172 296 NVSLFFTES-PTNPFLRCVD---VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 296 ~tklV~les-p~NPtG~v~d---i~~Ia~la~~~gillvv 331 (541)
+..|++-. ---..|.+.. --.++-+|+.||++++|
T Consensus 178 -vd~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 178 -ATLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred -CCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 44444411 0012243332 23677788999999887
No 452
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=33.64 E-value=37 Score=38.53 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=31.7
Q ss_pred CCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCC
Q 009172 304 SPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 304 sp~NPtG~v~di~~Ia~la~~~gillvvDea~a~ 337 (541)
.|++..|..-+++++++.||++||-||+|-+++-
T Consensus 205 Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~H 238 (628)
T COG0296 205 APTSRYGTPEDFKALVDAAHQAGIGVILDWVPNH 238 (628)
T ss_pred cccccCCCHHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 7999999999999999999999999999999653
No 453
>cd03332 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that catalyzes the conversion of L-lactate and oxygen to acetate, carbon dioxide, and water. LMO is a member of the family of alpha-hydroxy acid oxidases. It is thought to be a homooctamer with two- and four- fold axes in the center of the octamer.
Probab=33.09 E-value=1.6e+02 Score=31.49 Aligned_cols=83 Identities=19% Similarity=0.158 Sum_probs=51.8
Q ss_pred HHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCccc-----CHHHHHHHHHhC--CCEEEEEcCCCCC
Q 009172 266 IETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCV-----DVKLVSDLCHKK--GAIVCIDGTFATP 338 (541)
Q Consensus 266 ~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~-----di~~Ia~la~~~--gillvvDea~a~~ 338 (541)
+..+.+..++++..-...+.++.+.+++.. ...|++. |..|+.. .+..|.++.+.. ++.|++|.-...+
T Consensus 245 i~~lr~~~~~pvivKgV~~~~dA~~a~~~G-~d~I~vs---nhGGr~~d~~~~t~~~L~ei~~~~~~~~~vi~dGGIr~G 320 (383)
T cd03332 245 LAFLREWTDLPIVLKGILHPDDARRAVEAG-VDGVVVS---NHGGRQVDGSIAALDALPEIVEAVGDRLTVLFDSGVRTG 320 (383)
T ss_pred HHHHHHhcCCCEEEecCCCHHHHHHHHHCC-CCEEEEc---CCCCcCCCCCcCHHHHHHHHHHHhcCCCeEEEeCCcCcH
Confidence 333334445555544556788888888764 8899884 4555544 466677766544 4899999765444
Q ss_pred Cc-ccccccCCcEEE
Q 009172 339 LN-QKALSLGADLVL 352 (541)
Q Consensus 339 ~~-~~~l~~gaDivv 352 (541)
.. .+.+.+|+|.+.
T Consensus 321 ~Dv~KALaLGA~~v~ 335 (383)
T cd03332 321 ADIMKALALGAKAVL 335 (383)
T ss_pred HHHHHHHHcCCCEEE
Confidence 32 345666777654
No 454
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=32.67 E-value=2.5e+02 Score=26.66 Aligned_cols=43 Identities=14% Similarity=0.005 Sum_probs=29.2
Q ss_pred CCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEEC
Q 009172 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHS 354 (541)
Q Consensus 308 PtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S 354 (541)
.+|...++-++++.|+++|+.+|.= +.....++..-+|+++..
T Consensus 120 ~SG~t~~~i~~~~~ak~~g~~iI~i----T~~~~s~l~~~ad~~l~~ 162 (192)
T PRK00414 120 TSGNSGNIIKAIEAARAKGMKVITL----TGKDGGKMAGLADIEIRV 162 (192)
T ss_pred CCCCCHHHHHHHHHHHHCCCeEEEE----eCCCCChhHHhCCEEEEe
Confidence 4688888899999999999888752 222334444446766643
No 455
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=32.43 E-value=3.5e+02 Score=26.66 Aligned_cols=107 Identities=21% Similarity=0.259 Sum_probs=60.5
Q ss_pred HHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhccCC------CEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC-CCHHH
Q 009172 215 VEEKMSALEGAESTVIMASGMSASTVMLLALVPAG------GHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEG 287 (541)
Q Consensus 215 Le~~LA~l~g~~~~i~~sSG~~Ai~~al~all~~G------D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~-~dle~ 287 (541)
++..+..+.. .+.++++|..+. ......+...+ ..+.+- -.--...++.+|+.+.+++. .+.+.
T Consensus 41 l~~~l~~l~~-~d~vvfTS~~av-~~~~~~l~~~~~~~~~~~~i~aV-------G~~Ta~~l~~~G~~~~~~p~~~~~~~ 111 (248)
T COG1587 41 LEVALEDLDS-ADWVVFTSPNAV-RFFFEALKEQGLDALKNKKIAAV-------GEKTAEALRKLGIKVDFIPEDGDSEG 111 (248)
T ss_pred HHHHHhcccc-CCEEEEECHHHH-HHHHHHHHhhcccccccCeEEEE-------cHHHHHHHHHhCCCCCcCCCccchHH
Confidence 7777777766 577888877632 23333332223 333321 12223567788998888865 35555
Q ss_pred HHHhccCC---CeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcCCCC
Q 009172 288 LEAALNNN---NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFAT 337 (541)
Q Consensus 288 Le~ai~~~---~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea~a~ 337 (541)
+...+... ..+++++-+.. |. +.|.+-..+.|+-+..=++|-.
T Consensus 112 l~~~l~~~~~~~~~vl~~~~~~---~r----~~l~~~L~~~G~~v~~~~~Y~~ 157 (248)
T COG1587 112 LLEELPELLKGGKRVLILRGNG---GR----EVLEEKLEERGAEVREVEVYRT 157 (248)
T ss_pred HHHHhhhhccCCCeEEEEcCCC---ch----HHHHHHHHhCCCEEEEEeeeee
Confidence 55555432 13566653322 33 5677777888988776666544
No 456
>PLN02591 tryptophan synthase
Probab=32.37 E-value=3.1e+02 Score=27.44 Aligned_cols=89 Identities=16% Similarity=0.142 Sum_probs=54.9
Q ss_pred HHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCcEEEEeC-CC-CHHHHHHhccCCCeeEEEEeCCCCCCCcc----c
Q 009172 241 MLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVID-PA-DMEGLEAALNNNNVSLFFTESPTNPFLRC----V 313 (541)
Q Consensus 241 al~all~~G-D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd-~~-dle~Le~ai~~~~tklV~lesp~NPtG~v----~ 313 (541)
.+..+.+.| |-||+++..+.....+. ..++..|+...++- +. +.+.+++.... ....||+-+-...||.- .
T Consensus 98 F~~~~~~aGv~GviipDLP~ee~~~~~-~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~-~~gFIY~Vs~~GvTG~~~~~~~ 175 (250)
T PLN02591 98 FMATIKEAGVHGLVVPDLPLEETEALR-AEAAKNGIELVLLTTPTTPTERMKAIAEA-SEGFVYLVSSTGVTGARASVSG 175 (250)
T ss_pred HHHHHHHcCCCEEEeCCCCHHHHHHHH-HHHHHcCCeEEEEeCCCCCHHHHHHHHHh-CCCcEEEeeCCCCcCCCcCCch
Confidence 344444555 78899988876544433 45677888766542 33 45566655544 35678876666677763 2
Q ss_pred CHHHHHHHHHhC-CCEEEE
Q 009172 314 DVKLVSDLCHKK-GAIVCI 331 (541)
Q Consensus 314 di~~Ia~la~~~-gillvv 331 (541)
+++++.+.++++ ++++++
T Consensus 176 ~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 176 RVESLLQELKEVTDKPVAV 194 (250)
T ss_pred hHHHHHHHHHhcCCCceEE
Confidence 366655556654 777776
No 457
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=32.19 E-value=1.5e+02 Score=25.39 Aligned_cols=65 Identities=20% Similarity=0.234 Sum_probs=45.2
Q ss_pred HHHHhhcccCCcE-EEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcC
Q 009172 264 IFIETVLPKMGIT-ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 264 ~~~~~~l~~~Gi~-v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea 334 (541)
..+..+.+++|++ +.++.+.--|.-.-.|+.- +-.|++-.+.| .+++.|..||++.|+.+.++.-
T Consensus 23 ~~v~~i~~~~gI~diN~IKPGIgEaTRvLLRRv-P~~vLVr~~~~-----pd~~Hl~~LA~ekgVpVe~~~d 88 (100)
T PF15608_consen 23 AEVERIAERYGISDINLIKPGIGEATRVLLRRV-PWKVLVRDPDD-----PDLAHLLLLAEEKGVPVEVYPD 88 (100)
T ss_pred HHHHHHHHHhCCCCcccccCChhHHHHHHHhcC-CCEEEECCCCC-----ccHHHHHHHHHHcCCcEEEeCC
Confidence 3445566777764 5555555456555666653 56777766766 5789999999999999988653
No 458
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase. This model describes a rather tightly conserved cluster of IMP dehydrogenase sequences, many of which are characterized. The model excludes two related families of proteins proposed also to be IMP dehydrogenases, but without characterized members. These are related families are the subject of separate models.
Probab=32.13 E-value=1.6e+02 Score=32.13 Aligned_cols=108 Identities=21% Similarity=0.191 Sum_probs=63.6
Q ss_pred HhccCCCEEEEcCCCCcchHHHH---HhhcccC-CcEEEEeCCCCHHHHHHhccCCCeeEEEEe-CCCC--CC----Ccc
Q 009172 244 ALVPAGGHIVTTTDCYRKTRIFI---ETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFFTE-SPTN--PF----LRC 312 (541)
Q Consensus 244 all~~GD~VIv~~~~y~~~~~~~---~~~l~~~-Gi~v~~vd~~dle~Le~ai~~~~tklV~le-sp~N--Pt----G~v 312 (541)
.+.+.|-.+|.-+..|+.....+ +.+-+.+ .+.+..-+..+.++...+++.. ...|-+. .|.. .| |.-
T Consensus 231 ~L~~aG~d~I~vd~a~g~~~~~~~~i~~i~~~~~~~~vi~G~v~t~~~a~~l~~aG-ad~i~vg~g~G~~~~t~~~~~~g 309 (450)
T TIGR01302 231 ALVKAGVDVIVIDSSHGHSIYVIDSIKEIKKTYPDLDIIAGNVATAEQAKALIDAG-ADGLRVGIGPGSICTTRIVAGVG 309 (450)
T ss_pred HHHHhCCCEEEEECCCCcHhHHHHHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHhC-CCEEEECCCCCcCCccceecCCC
Confidence 45566756666666665433333 2222222 3444444566788888888763 6677553 2220 11 111
Q ss_pred ----cCHHHHHHHHHhCCCEEEEEcCCCCCC-cccccccCCcEEE
Q 009172 313 ----VDVKLVSDLCHKKGAIVCIDGTFATPL-NQKALSLGADLVL 352 (541)
Q Consensus 313 ----~di~~Ia~la~~~gillvvDea~a~~~-~~~~l~~gaDivv 352 (541)
..+.++++.++++++++|.|.=...+. ..+.+..|+|.|.
T Consensus 310 ~p~~~~i~~~~~~~~~~~vpviadGGi~~~~di~kAla~GA~~V~ 354 (450)
T TIGR01302 310 VPQITAVYDVAEYAAQSGIPVIADGGIRYSGDIVKALAAGADAVM 354 (450)
T ss_pred ccHHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 124567777888999999998654432 3567888999876
No 459
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=32.03 E-value=3.1e+02 Score=25.41 Aligned_cols=24 Identities=21% Similarity=0.088 Sum_probs=18.9
Q ss_pred CCCCcccCHHHHHHHHHhCCCEEE
Q 009172 307 NPFLRCVDVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 307 NPtG~v~di~~Ia~la~~~gillv 330 (541)
..+|...++-++++.|+++|+.+|
T Consensus 83 S~sG~t~~~i~~~~~ak~~g~~iI 106 (179)
T cd05005 83 SGSGETSSVVNAAEKAKKAGAKVV 106 (179)
T ss_pred cCCCCcHHHHHHHHHHHHCCCeEE
Confidence 345777788889999999997655
No 460
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=31.62 E-value=2.4e+02 Score=23.81 Aligned_cols=85 Identities=15% Similarity=0.158 Sum_probs=49.3
Q ss_pred HHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCC--CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCH
Q 009172 238 STVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP--ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDV 315 (541)
Q Consensus 238 i~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~--~dle~Le~ai~~~~tklV~lesp~NPtG~v~di 315 (541)
+...+..+.+-|=+|..+. ++.. .++..|+.+..+.. ..-..+.+.+.+++..+|+. .|+... ...+-
T Consensus 15 ~~~~~~~l~~~G~~l~aT~----gT~~----~l~~~gi~~~~v~~~~~~~~~i~~~i~~~~id~vIn-~~~~~~-~~~~~ 84 (110)
T cd01424 15 AVEIAKRLAELGFKLVATE----GTAK----YLQEAGIPVEVVNKVSEGRPNIVDLIKNGEIQLVIN-TPSGKR-AIRDG 84 (110)
T ss_pred HHHHHHHHHHCCCEEEEch----HHHH----HHHHcCCeEEEEeecCCCchhHHHHHHcCCeEEEEE-CCCCCc-cCccH
Confidence 3344455556677776543 3333 33446777655532 22345666676655666654 344222 23345
Q ss_pred HHHHHHHHhCCCEEEEE
Q 009172 316 KLVSDLCHKKGAIVCID 332 (541)
Q Consensus 316 ~~Ia~la~~~gillvvD 332 (541)
..|.+.|-++|++++..
T Consensus 85 ~~iRR~Av~~~ipl~T~ 101 (110)
T cd01424 85 FSIRRAALEYKVPYFTT 101 (110)
T ss_pred HHHHHHHHHhCCCEEec
Confidence 68999999999999854
No 461
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=31.45 E-value=1.9e+02 Score=26.51 Aligned_cols=74 Identities=14% Similarity=0.077 Sum_probs=48.5
Q ss_pred EEEEcCCC---CcchHHHHHhhcccCCcEEEEeCCC-CHH-HHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhC
Q 009172 251 HIVTTTDC---YRKTRIFIETVLPKMGITATVIDPA-DME-GLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKK 325 (541)
Q Consensus 251 ~VIv~~~~---y~~~~~~~~~~l~~~Gi~v~~vd~~-dle-~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~ 325 (541)
+|++-.+. |.--..++...++..|++|.+.... .++ .+.+++++ .+..|.+++-+ -+.....+.+.+.++++
T Consensus 14 rvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~tp~e~v~aA~~~-dv~vIgvSsl~--g~h~~l~~~lve~lre~ 90 (143)
T COG2185 14 RVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQTPEEAVRAAVEE-DVDVIGVSSLD--GGHLTLVPGLVEALREA 90 (143)
T ss_pred eEEEeccCccccccchHHHHHHHHhCCceEEecCCcCCHHHHHHHHHhc-CCCEEEEEecc--chHHHHHHHHHHHHHHh
Confidence 45544433 4333455667788889999876543 344 45556665 47788886655 45666788999999998
Q ss_pred CC
Q 009172 326 GA 327 (541)
Q Consensus 326 gi 327 (541)
|.
T Consensus 91 G~ 92 (143)
T COG2185 91 GV 92 (143)
T ss_pred CC
Confidence 63
No 462
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=31.38 E-value=1.5e+02 Score=30.70 Aligned_cols=87 Identities=22% Similarity=0.285 Sum_probs=50.4
Q ss_pred HHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHh----CCCEEEEEcCCCCCCcccccccCCcEEEECCccccCCCC
Q 009172 288 LEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK----KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHN 363 (541)
Q Consensus 288 Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~----~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lgg~g 363 (541)
|+++....+++.|++ -.|.|.|.+..-+.|.+..++ .-+++.++...+++-. .....+|-++.+-+=..|.
T Consensus 89 l~~~~~~~~vk~vvL-~inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AASGGY--~IA~aAd~I~a~p~si~GS-- 163 (317)
T COG0616 89 LRAARADPSVKAVVL-RINSPGGSVVASELIARALKRLRAKKPVVVSVGGYAASGGY--YIALAADKIVADPSSITGS-- 163 (317)
T ss_pred HHHHhcCCCCceEEE-EEECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeecchhh--hhhccCCEEEecCCceeee--
Confidence 333333335777777 668888999886655555443 3367777776554321 2345567666555555552
Q ss_pred CceEEEEEeChHHHHHHHH
Q 009172 364 DVLAGSISGSGKLVTQIRN 382 (541)
Q Consensus 364 ~v~gG~vv~~~~li~~l~~ 382 (541)
.|++.....+.+.+.+
T Consensus 164 ---IGVi~~~~~~~~l~~k 179 (317)
T COG0616 164 ---IGVISGAPNFEELLEK 179 (317)
T ss_pred ---ceeEEecCCHHHHHHh
Confidence 4667666655555444
No 463
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=31.29 E-value=1.5e+02 Score=26.82 Aligned_cols=67 Identities=13% Similarity=0.176 Sum_probs=44.6
Q ss_pred CCcchHHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC
Q 009172 258 CYRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 326 (541)
Q Consensus 258 ~y~~~~~~~~~~l~~~Gi~v~~vd~~-dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~g 326 (541)
.|.--...+...++..|.+|...-.+ .++++.++..++++.+|-+.+-. +.....++++.+.+++.|
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~--~~~~~~~~~~~~~l~~~g 80 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLY--GHGEIDCKGLRQKCDEAG 80 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--ccCHHHHHHHHHHHHHCC
Confidence 34433455666788889999877543 56777666555468888884444 334446888888888875
No 464
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=31.12 E-value=1.5e+02 Score=26.51 Aligned_cols=66 Identities=12% Similarity=0.139 Sum_probs=42.9
Q ss_pred CcchHHHHHhhcccCCcEEEEeCCC-CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCC
Q 009172 259 YRKTRIFIETVLPKMGITATVIDPA-DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG 326 (541)
Q Consensus 259 y~~~~~~~~~~l~~~Gi~v~~vd~~-dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~g 326 (541)
|.--.+++...++..|.+|...-.+ .++.+.++..+++..+|.+.+-. +.....++++.+.+++.|
T Consensus 12 HdiGkniv~~~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~--t~~~~~~~~~~~~l~~~g 78 (128)
T cd02072 12 HAVGNKILDHAFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLY--GHGEIDCKGLREKCDEAG 78 (128)
T ss_pred hHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cCCHHHHHHHHHHHHHCC
Confidence 4333455566778889999876543 56666655544468888884433 334456788888888765
No 465
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=30.81 E-value=2.4e+02 Score=28.14 Aligned_cols=70 Identities=16% Similarity=0.222 Sum_probs=41.1
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC--CC-----CHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHH
Q 009172 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--PA-----DMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSD 320 (541)
Q Consensus 248 ~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd--~~-----dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~ 320 (541)
++..+++..+.|. .+++.+|+++..+. .. ++.++.+.++++++++||.|.-.| -+.+..
T Consensus 169 ~~~~~v~~H~af~-------Y~~~~ygl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~-------~~~~~~ 234 (266)
T cd01018 169 KQRAFMVYHPAWG-------YFARDYGLTQIPIEEEGKEPSPADLKRLIDLAKEKGVRVVFVQPQFS-------TKSAEA 234 (266)
T ss_pred CCCeEEEECchhH-------HHHHHcCCEEEecCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC-------cHHHHH
Confidence 3556776544442 24566787765542 11 355666667666788888864222 134447
Q ss_pred HHHhCCCEEEE
Q 009172 321 LCHKKGAIVCI 331 (541)
Q Consensus 321 la~~~gillvv 331 (541)
++++.|+.++.
T Consensus 235 la~~~g~~v~~ 245 (266)
T cd01018 235 IAREIGAKVVT 245 (266)
T ss_pred HHHHcCCeEEE
Confidence 77888877654
No 466
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=30.39 E-value=2e+02 Score=27.93 Aligned_cols=86 Identities=15% Similarity=0.095 Sum_probs=44.7
Q ss_pred HHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHH---hCCCEEE--EEcCCCCCCcccccccCCcEEEECCccccC
Q 009172 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCH---KKGAIVC--IDGTFATPLNQKALSLGADLVLHSATKFIG 360 (541)
Q Consensus 286 e~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~---~~gillv--vDea~a~~~~~~~l~~gaDivv~S~sK~lg 360 (541)
+.|+++-++.+++.|++ ..+.|.|...++++|.+..+ +.+.++| +|.+....+ .+...+|.++.+-+-.++
T Consensus 36 ~~l~~a~~d~~ik~vvL-~~~s~gg~~~~~~el~~~i~~~~~~~kpVia~~~~~~sggy---~lasaad~I~a~p~~~vg 111 (222)
T cd07018 36 EALEKAAEDDRIKGIVL-DLDGLSGGLAKLEELRQALERFRASGKPVIAYADGYSQGQY---YLASAADEIYLNPSGSVE 111 (222)
T ss_pred HHHHHHhcCCCeEEEEE-ECCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCCchhh---hhhhhCCEEEECCCceEE
Confidence 34444444435899999 45668888888887776553 2344444 443222222 223346665544443333
Q ss_pred CCCCceEEEEEeChHHHHHH
Q 009172 361 GHNDVLAGSISGSGKLVTQI 380 (541)
Q Consensus 361 g~g~v~gG~vv~~~~li~~l 380 (541)
..|++.....+.+.+
T Consensus 112 -----~iGv~~~~~~~~~ll 126 (222)
T cd07018 112 -----LTGLSAETLFFKGLL 126 (222)
T ss_pred -----eeccchhhhhHHHHH
Confidence 345555444333333
No 467
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=30.23 E-value=2.3e+02 Score=27.33 Aligned_cols=42 Identities=26% Similarity=0.298 Sum_probs=29.0
Q ss_pred CCHHH---HHHhccCCCeeEEEEeCCCCCCC-cccCHHHHHHHHHh
Q 009172 283 ADMEG---LEAALNNNNVSLFFTESPTNPFL-RCVDVKLVSDLCHK 324 (541)
Q Consensus 283 ~dle~---Le~ai~~~~tklV~lesp~NPtG-~v~di~~Ia~la~~ 324 (541)
.|++. |.+++...++.+|+-....|+|| .+.|-..+.++|.+
T Consensus 120 tdp~~~~ki~e~lp~r~VdvVlSDMapnaTGvr~~Dh~~~i~LC~s 165 (232)
T KOG4589|consen 120 TDPETYRKIFEALPNRPVDVVLSDMAPNATGVRIRDHYRSIELCDS 165 (232)
T ss_pred CCHHHHHHHHHhCCCCcccEEEeccCCCCcCcchhhHHHHHHHHHH
Confidence 35543 44445433577777777779999 45688899999975
No 468
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=30.21 E-value=1.3e+02 Score=25.42 Aligned_cols=48 Identities=13% Similarity=0.016 Sum_probs=30.9
Q ss_pred EEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009172 277 ATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 277 v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvv 331 (541)
+..+..+..|-+..++..+ .+++++. |...+-+++.++|++.+++++.
T Consensus 43 lvIt~gdR~di~~~a~~~~-i~~iIlt------g~~~~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 43 LVITPGDREDIQLAAIEAG-IACIILT------GGLEPSEEVLELAKELGIPVIS 90 (105)
T ss_dssp EEEEETT-HHHHHHHCCTT-ECEEEEE------TT----HHHHHHHHHHT-EEEE
T ss_pred EEEEeCCcHHHHHHHHHhC-CCEEEEe------CCCCCCHHHHHHHHHCCCEEEE
Confidence 3334455677777788764 8888883 5556778999999999988875
No 469
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Ralstonia eutropha (Alcaligenes eutrophus) two copies of the gene coding for PPE are known [], one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process; PDB: 3CTL_A 3CT7_D 3CU2_A 1RPX_A 3OVR_A 3OVP_A 3OVQ_B 3QC3_B 3INP_A 1TQJ_D ....
Probab=30.20 E-value=1.1e+02 Score=29.67 Aligned_cols=82 Identities=20% Similarity=0.240 Sum_probs=45.3
Q ss_pred hcccCCcEEEE--eCCCCHHHHHHhccCCCeeEEEEeCCCCC--CCcccC------HHHHHHHHHh--CCCEEEEEcCCC
Q 009172 269 VLPKMGITATV--IDPADMEGLEAALNNNNVSLFFTESPTNP--FLRCVD------VKLVSDLCHK--KGAIVCIDGTFA 336 (541)
Q Consensus 269 ~l~~~Gi~v~~--vd~~dle~Le~ai~~~~tklV~lesp~NP--tG~v~d------i~~Ia~la~~--~gillvvDea~a 336 (541)
..+..|+++-. -+...++.++..+.. ...|.+.+.+ | .|.... ++++.++..+ +++.+.+|.--.
T Consensus 100 ~ik~~g~k~GialnP~T~~~~~~~~l~~--vD~VlvMsV~-PG~~Gq~f~~~~~~KI~~l~~~~~~~~~~~~I~vDGGI~ 176 (201)
T PF00834_consen 100 YIKEAGIKAGIALNPETPVEELEPYLDQ--VDMVLVMSVE-PGFGGQKFIPEVLEKIRELRKLIPENGLDFEIEVDGGIN 176 (201)
T ss_dssp HHHHTTSEEEEEE-TTS-GGGGTTTGCC--SSEEEEESS--TTTSSB--HGGHHHHHHHHHHHHHHHTCGSEEEEESSES
T ss_pred HHHHhCCCEEEEEECCCCchHHHHHhhh--cCEEEEEEec-CCCCcccccHHHHHHHHHHHHHHHhcCCceEEEEECCCC
Confidence 34555665433 244567778877763 6777777764 5 344322 4445555555 568999998644
Q ss_pred CCCcccccccCCcEEEE
Q 009172 337 TPLNQKALSLGADLVLH 353 (541)
Q Consensus 337 ~~~~~~~l~~gaDivv~ 353 (541)
..-.....+.|+|+++.
T Consensus 177 ~~~~~~~~~aGad~~V~ 193 (201)
T PF00834_consen 177 EENIKQLVEAGADIFVA 193 (201)
T ss_dssp TTTHHHHHHHT--EEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 33333445679998764
No 470
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=30.16 E-value=2e+02 Score=29.42 Aligned_cols=52 Identities=8% Similarity=0.073 Sum_probs=33.4
Q ss_pred eCCCCHHHHHHhccCCCeeEEEEeCCC-CCCCcccC-----------HHHHHHHHHhCCCEEEE
Q 009172 280 IDPADMEGLEAALNNNNVSLFFTESPT-NPFLRCVD-----------VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 280 vd~~dle~Le~ai~~~~tklV~lesp~-NPtG~v~d-----------i~~Ia~la~~~gillvv 331 (541)
+|..|.+.+.+.+++.++.+|+-+... +...--.+ ...|+++|++.|+++|-
T Consensus 34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh 97 (281)
T COG1091 34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH 97 (281)
T ss_pred ccccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE
Confidence 456678888888876556677654433 33222222 33788999999988763
No 471
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=30.14 E-value=3.3e+02 Score=27.58 Aligned_cols=14 Identities=7% Similarity=-0.135 Sum_probs=6.2
Q ss_pred EEEEeCCCCCCCcc
Q 009172 299 LFFTESPTNPFLRC 312 (541)
Q Consensus 299 lV~lesp~NPtG~v 312 (541)
.||+-+-+-.||.-
T Consensus 173 FiY~vs~~GvTG~~ 186 (265)
T COG0159 173 FIYYVSRMGVTGAR 186 (265)
T ss_pred cEEEEecccccCCC
Confidence 44444444444443
No 472
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=30.14 E-value=75 Score=34.03 Aligned_cols=45 Identities=20% Similarity=0.209 Sum_probs=33.4
Q ss_pred HHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEEEcC
Q 009172 286 EGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 286 e~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia~la~~~gillvvDea 334 (541)
+.+++++.+ .++|++.-- --|.+.+.+.+.++|+++|+++++|--
T Consensus 135 ~~~~~~l~~--~~~vVLSDY--~KG~L~~~q~~I~~ar~~~~pVLvDPK 179 (467)
T COG2870 135 EKIKNALKS--FDALVLSDY--AKGVLTNVQKMIDLAREAGIPVLVDPK 179 (467)
T ss_pred HHHHHHhhc--CCEEEEecc--ccccchhHHHHHHHHHHcCCcEEECCC
Confidence 344444443 678888332 258888899999999999999999953
No 473
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=30.02 E-value=2.7e+02 Score=29.57 Aligned_cols=53 Identities=9% Similarity=0.196 Sum_probs=35.5
Q ss_pred EeCCCCHHHHHHhccCCCeeEEEEeCCCCCC--------CcccC----HHHHHHHHHhCCCEEEE
Q 009172 279 VIDPADMEGLEAALNNNNVSLFFTESPTNPF--------LRCVD----VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 279 ~vd~~dle~Le~ai~~~~tklV~lesp~NPt--------G~v~d----i~~Ia~la~~~gillvv 331 (541)
.+...+++.+.+.+...++++|++.+.++.. |.+.. +..|.++++++|+.+++
T Consensus 141 l~~e~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 141 LLAETNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred EEccCcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 3445678888888866568999998876432 12222 34577889999986654
No 474
>cd00150 PlantTI Plant trypsin inhibitors such as squash trypsin inhibitor. Plant proteinase inhibitors play important roles in natural plant defense. Proteinase inhibitors from squash seeds form an uniform family of small proteins cross-linked with three disulfide bridges.
Probab=29.83 E-value=24 Score=22.47 Aligned_cols=15 Identities=40% Similarity=0.815 Sum_probs=12.3
Q ss_pred ccccccccCCCCcccccCCCCCC
Q 009172 8 SQKILSFSSSCSSFECRSDPDFS 30 (541)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~ 30 (541)
|||++ .+|..|.|-.
T Consensus 1 CPrIl--------m~Ck~DsDCl 15 (27)
T cd00150 1 CPRIL--------MECKRDSDCL 15 (27)
T ss_pred Ccchh--------eecccccccc
Confidence 78998 8999998853
No 475
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=29.73 E-value=4.2e+02 Score=26.74 Aligned_cols=44 Identities=23% Similarity=0.162 Sum_probs=30.2
Q ss_pred CCCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEEC
Q 009172 307 NPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHS 354 (541)
Q Consensus 307 NPtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S 354 (541)
+-+|...++-++++.++++|+.+|. -+.....|+..-+|+++..
T Consensus 185 S~sG~t~e~i~~a~~ak~~ga~vIa----iT~~~~spla~~Ad~~L~~ 228 (281)
T COG1737 185 SFSGYTREIVEAAELAKERGAKVIA----ITDSADSPLAKLADIVLLV 228 (281)
T ss_pred eCCCCcHHHHHHHHHHHHCCCcEEE----EcCCCCCchhhhhceEEec
Confidence 3468888899999999999987774 1222344555557777644
No 476
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=29.52 E-value=5.4e+02 Score=25.56 Aligned_cols=41 Identities=24% Similarity=0.096 Sum_probs=27.0
Q ss_pred CCCCcccCHHHHHHHHHhCCCEEEE--EcCCCCCCcccccccCCcEEEE
Q 009172 307 NPFLRCVDVKLVSDLCHKKGAIVCI--DGTFATPLNQKALSLGADLVLH 353 (541)
Q Consensus 307 NPtG~v~di~~Ia~la~~~gillvv--Dea~a~~~~~~~l~~gaDivv~ 353 (541)
+..|...++-++++.|+++|+.+|+ |.. ..++...+|+++.
T Consensus 183 S~sg~~~~~~~~~~~ak~~ga~iI~IT~~~------~s~la~~ad~~l~ 225 (278)
T PRK11557 183 SYSGERRELNLAADEALRVGAKVLAITGFT------PNALQQRASHCLY 225 (278)
T ss_pred cCCCCCHHHHHHHHHHHHcCCCEEEEcCCC------CCchHHhCCEEEE
Confidence 3457777888999999999876553 332 2344445777664
No 477
>smart00642 Aamy Alpha-amylase domain.
Probab=29.45 E-value=53 Score=30.60 Aligned_cols=29 Identities=28% Similarity=0.322 Sum_probs=25.6
Q ss_pred CCCcccCHHHHHHHHHhCCCEEEEEcCCC
Q 009172 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFA 336 (541)
Q Consensus 308 PtG~v~di~~Ia~la~~~gillvvDea~a 336 (541)
..|...+++++++.||++|+.||+|-+..
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 46788889999999999999999998854
No 478
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=29.32 E-value=2.5e+02 Score=30.99 Aligned_cols=112 Identities=18% Similarity=0.140 Sum_probs=64.1
Q ss_pred HHHHHhccCCCEEEEcCCCCcchHHHH---HhhcccC-CcEEEEeCCCCHHHHHHhccCCCeeEEE-------EeCCCCC
Q 009172 240 VMLLALVPAGGHIVTTTDCYRKTRIFI---ETVLPKM-GITATVIDPADMEGLEAALNNNNVSLFF-------TESPTNP 308 (541)
Q Consensus 240 ~al~all~~GD~VIv~~~~y~~~~~~~---~~~l~~~-Gi~v~~vd~~dle~Le~ai~~~~tklV~-------lesp~NP 308 (541)
..+..+++.|-.+|+-+..|+.....+ +.+-+.+ ++.+.--+..+.+..+.+++.. ..+|- +|+-...
T Consensus 230 ~~a~~Lv~aGvd~i~~D~a~~~~~~~~~~i~~ik~~~p~~~v~agnv~t~~~a~~l~~aG-ad~v~vgig~gsictt~~~ 308 (479)
T PRK07807 230 AKARALLEAGVDVLVVDTAHGHQEKMLEALRAVRALDPGVPIVAGNVVTAEGTRDLVEAG-ADIVKVGVGPGAMCTTRMM 308 (479)
T ss_pred HHHHHHHHhCCCEEEEeccCCccHHHHHHHHHHHHHCCCCeEEeeccCCHHHHHHHHHcC-CCEEEECccCCcccccccc
Confidence 344556677766677777776533333 2232333 4455433666778777777653 44443 1222334
Q ss_pred CCccc-CHHHHHHH---HHhCCCEEEEEcCCCCC-CcccccccCCcEEE
Q 009172 309 FLRCV-DVKLVSDL---CHKKGAIVCIDGTFATP-LNQKALSLGADLVL 352 (541)
Q Consensus 309 tG~v~-di~~Ia~l---a~~~gillvvDea~a~~-~~~~~l~~gaDivv 352 (541)
||.-. ++..|.++ |+++++++|.|.-...+ -..+.+..|+|.++
T Consensus 309 ~~~~~p~~~av~~~~~~~~~~~~~via~ggi~~~~~~~~al~~ga~~v~ 357 (479)
T PRK07807 309 TGVGRPQFSAVLECAAAARELGAHVWADGGVRHPRDVALALAAGASNVM 357 (479)
T ss_pred cCCchhHHHHHHHHHHHHHhcCCcEEecCCCCCHHHHHHHHHcCCCeee
Confidence 45333 35555544 45889999999865443 23456778988765
No 479
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=29.19 E-value=2.4e+02 Score=29.69 Aligned_cols=93 Identities=18% Similarity=0.220 Sum_probs=50.1
Q ss_pred EEeCCHHHHHHHHHHHhccCCC--EEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCC
Q 009172 229 VIMASGMSASTVMLLALVPAGG--HIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (541)
Q Consensus 229 i~~sSG~~Ai~~al~all~~GD--~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~ 306 (541)
+++..|..+- .++..|.+.++ +|++.+..-......... +....++...+|..|.++|++.+++ .++|+-+.|.
T Consensus 2 lvlG~G~vG~-~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~~~~--~dvVin~~gp 77 (386)
T PF03435_consen 2 LVLGAGRVGS-AIARLLARRGPFEEVTVADRNPEKAERLAEK-LLGDRVEAVQVDVNDPESLAELLRG--CDVVINCAGP 77 (386)
T ss_dssp EEE--SHHHH-HHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTT--SSEEEE-SSG
T ss_pred EEEcCcHHHH-HHHHHHhcCCCCCcEEEEECCHHHHHHHHhh-ccccceeEEEEecCCHHHHHHHHhc--CCEEEECCcc
Confidence 4555565332 22334444443 677655444332222111 1334677888888999999999976 4677654433
Q ss_pred CCCCcccCHHHHHHHHHhCCCEEEEE
Q 009172 307 NPFLRCVDVKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 307 NPtG~v~di~~Ia~la~~~gillvvD 332 (541)
. .-..|++.|.++|+. .+|
T Consensus 78 ~------~~~~v~~~~i~~g~~-yvD 96 (386)
T PF03435_consen 78 F------FGEPVARACIEAGVH-YVD 96 (386)
T ss_dssp G------GHHHHHHHHHHHT-E-EEE
T ss_pred c------hhHHHHHHHHHhCCC-eec
Confidence 2 345788888888886 556
No 480
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=29.10 E-value=90 Score=28.08 Aligned_cols=56 Identities=18% Similarity=0.183 Sum_probs=40.1
Q ss_pred CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC----HHHHHHH-HHhC-CCEE-EEEcCCCCC
Q 009172 283 ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD----VKLVSDL-CHKK-GAIV-CIDGTFATP 338 (541)
Q Consensus 283 ~dle~Le~ai~~~~tklV~lesp~NPtG~v~d----i~~Ia~l-a~~~-gill-vvDea~a~~ 338 (541)
.+.+.|.+.++++++..|++-.|-|..|..-+ +.+.++. .++. ++.+ .+||-+.+.
T Consensus 38 ~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT~ 100 (135)
T PF03652_consen 38 KDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTTK 100 (135)
T ss_dssp CCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSHH
T ss_pred hHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhHH
Confidence 47889999998777899999999998888766 3333333 3444 7765 499987654
No 481
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=29.08 E-value=2.2e+02 Score=28.65 Aligned_cols=69 Identities=20% Similarity=0.370 Sum_probs=40.3
Q ss_pred CCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC---C------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHH
Q 009172 248 AGGHIVTTTDCYRKTRIFIETVLPKMGITATVID---P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (541)
Q Consensus 248 ~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd---~------~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~I 318 (541)
++..+++..+.|. .+++.+|+++..+. . .++.++.+.++++++++||.+.-.|+ +.+
T Consensus 170 ~~~~~v~~H~af~-------Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 235 (282)
T cd01017 170 KGKTFVTQHAAFG-------YLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASS-------KIA 235 (282)
T ss_pred CCCeEEEecccHH-------HHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 3566776555443 23566777765432 1 13556666666667888888553332 344
Q ss_pred HHHHHhCCCEEE
Q 009172 319 SDLCHKKGAIVC 330 (541)
Q Consensus 319 a~la~~~gillv 330 (541)
..++++.|+.++
T Consensus 236 ~~la~~~g~~v~ 247 (282)
T cd01017 236 ETLAKETGAKLL 247 (282)
T ss_pred HHHHHHcCCcEE
Confidence 557777777654
No 482
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=28.88 E-value=1e+02 Score=31.02 Aligned_cols=84 Identities=13% Similarity=0.213 Sum_probs=50.7
Q ss_pred cCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC--CCCHHHHHHhccC--CCeeEEEEeCCCCCCCcccCHHHHHHHH
Q 009172 247 PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--PADMEGLEAALNN--NNVSLFFTESPTNPFLRCVDVKLVSDLC 322 (541)
Q Consensus 247 ~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd--~~dle~Le~ai~~--~~tklV~lesp~NPtG~v~di~~Ia~la 322 (541)
--||+|+.-+.. .....++.+.+...|+++.++. .+++++|.++++. .+..+|++.. -.|-..|--.--.+|
T Consensus 8 ~vG~ElL~G~iv-dtNa~~la~~L~~~G~~v~~~~~VgD~~~~I~~~l~~a~~r~D~vI~tG---GLGPT~DDiT~e~vA 83 (255)
T COG1058 8 AVGDELLSGRIV-DTNAAFLADELTELGVDLARITTVGDNPDRIVEALREASERADVVITTG---GLGPTHDDLTAEAVA 83 (255)
T ss_pred EEccceecCcee-cchHHHHHHHHHhcCceEEEEEecCCCHHHHHHHHHHHHhCCCEEEECC---CcCCCccHhHHHHHH
Confidence 347777754432 2344566677888899887764 4677777766641 1367888732 233333322223455
Q ss_pred HhCCCEEEEEcC
Q 009172 323 HKKGAIVCIDGT 334 (541)
Q Consensus 323 ~~~gillvvDea 334 (541)
+..|..++.|+-
T Consensus 84 ka~g~~lv~~~~ 95 (255)
T COG1058 84 KALGRPLVLDEE 95 (255)
T ss_pred HHhCCCcccCHH
Confidence 667888888875
No 483
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=28.84 E-value=1.5e+02 Score=30.08 Aligned_cols=68 Identities=18% Similarity=0.315 Sum_probs=41.3
Q ss_pred CCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC---C------CCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHHH
Q 009172 249 GGHIVTTTDCYRKTRIFIETVLPKMGITATVID---P------ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVS 319 (541)
Q Consensus 249 GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd---~------~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~Ia 319 (541)
+..+++..+.|. .+++++|+++..+- . .++.++.+.++++++++||.|.-.++ +.+.
T Consensus 177 ~~~~v~~H~af~-------Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~ 242 (287)
T cd01137 177 KRKLVTSEGAFS-------YFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVND-------RLMK 242 (287)
T ss_pred cCEEEEecccHH-------HHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCCh-------HHHH
Confidence 456776554442 23566788765431 1 14566666677667999998554432 4556
Q ss_pred HHHHhCCCEEE
Q 009172 320 DLCHKKGAIVC 330 (541)
Q Consensus 320 ~la~~~gillv 330 (541)
.++++.|+.++
T Consensus 243 ~ia~~~gv~v~ 253 (287)
T cd01137 243 QVAKETGAKIG 253 (287)
T ss_pred HHHHHhCCccc
Confidence 77888888653
No 484
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=28.79 E-value=2.1e+02 Score=32.15 Aligned_cols=100 Identities=16% Similarity=0.177 Sum_probs=55.5
Q ss_pred CcEEEeCCHH-HHHHHHHH-HhccCCCE----EEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeE
Q 009172 226 ESTVIMASGM-SASTVMLL-ALVPAGGH----IVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSL 299 (541)
Q Consensus 226 ~~~i~~sSG~-~Ai~~al~-all~~GD~----VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tkl 299 (541)
.-++++++|. +++.+++. ...+.... |-.....+. -..+....+..+|.+.+.+ ....+++.+++.+ -+
T Consensus 232 pvg~~lSGGlDSS~Iaa~a~~~~~~~~~~~fsvg~~~~~~~-D~~~a~~~A~~lg~~h~~~-~~~~~e~~~~~~~---vv 306 (542)
T COG0367 232 PVGVFLSGGLDSSLIAAIAAEELGKEGKTTFTVGFEDSDSP-DAKYARAVAKFLGTPHHEI-ILTNEELLNALPE---VV 306 (542)
T ss_pred cEEEEeCCCccHHHHHHHHHHhccccceeeeEeecCCCCCc-hHHHHHHHHHHhCCCcEEE-eecHHHHHHHHHH---HH
Confidence 4578888887 44444443 33332222 222222111 2333444555566533222 2245666666643 24
Q ss_pred EEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009172 300 FFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 300 V~lesp~NPtG~v~di~~Ia~la~~~gillvv 331 (541)
..++.|.. .....|+--+++.+++++..++.
T Consensus 307 ~~~~~p~~-~~~~~ply~~~~~a~~~g~kVvL 337 (542)
T COG0367 307 KALDTPGG-MAASIPLYLLSRKARAEGEKVVL 337 (542)
T ss_pred hhcCCCCc-ccchhHHHHHHHhhhhcCcEEee
Confidence 45666764 66777888999999999988777
No 485
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=28.64 E-value=2.8e+02 Score=27.79 Aligned_cols=101 Identities=14% Similarity=0.132 Sum_probs=50.2
Q ss_pred CcEEEeCCHHHHHHHHHHHhccCCC--EEEEcC--CCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEE
Q 009172 226 ESTVIMASGMSASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFF 301 (541)
Q Consensus 226 ~~~i~~sSG~~Ai~~al~all~~GD--~VIv~~--~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~ 301 (541)
.+.|++-+-+..+...|....+.|. +|++.+ |.+.+ ..+. ..+...|+++.++....+ -..+.. ++..|+
T Consensus 108 ~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG-~~~a-~~L~~~gi~v~~i~d~~~---~~~m~~-~vd~Vl 181 (282)
T PF01008_consen 108 GDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEG-RLMA-KELAEAGIPVTLIPDSAV---GYVMPR-DVDKVL 181 (282)
T ss_dssp TEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHH-HTHH-HHHHHTT-EEEEE-GGGH---HHHHHC-TESEEE
T ss_pred CeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhh-hhHH-HHhhhcceeEEEEechHH---HHHHHH-hCCeeE
Confidence 4566666666555565655445452 444443 33444 3333 445667999998864333 333332 144555
Q ss_pred EeCCC-CCCCcccC---HHHHHHHHHhCCCEEEEE
Q 009172 302 TESPT-NPFLRCVD---VKLVSDLCHKKGAIVCID 332 (541)
Q Consensus 302 lesp~-NPtG~v~d---i~~Ia~la~~~gillvvD 332 (541)
+-.=. -..|.+.. -..++-+|++++++++|=
T Consensus 182 iGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 182 IGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp EE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred EeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 42211 23343332 346777889999988874
No 486
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=28.56 E-value=98 Score=26.25 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=14.8
Q ss_pred EEEEeCCCCCCCcccCHHHHHHHHHhCCCEEEE
Q 009172 299 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 299 lV~lesp~NPtG~v~di~~Ia~la~~~gillvv 331 (541)
-|++|-|- .....+.++|.++++++|..+.|
T Consensus 88 ~v~~EKP~--~~~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 88 HVLVEKPL--ALTLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp EEEEESSS--SSSHHHHHHHHHHHHHHTSCEEE
T ss_pred EEEEEcCC--cCCHHHHHHHHHHHHHhCCEEEE
Confidence 44444444 12333455555555555555444
No 487
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=28.34 E-value=1.8e+02 Score=27.26 Aligned_cols=59 Identities=20% Similarity=0.129 Sum_probs=31.4
Q ss_pred cccCCcEEEEeCCCC----------HHHHHHhc----cCCC-eeEEEEeCCCCCCCcccC--HHHHHHHHHhCCCEEEE
Q 009172 270 LPKMGITATVIDPAD----------MEGLEAAL----NNNN-VSLFFTESPTNPFLRCVD--VKLVSDLCHKKGAIVCI 331 (541)
Q Consensus 270 l~~~Gi~v~~vd~~d----------le~Le~ai----~~~~-tklV~lesp~NPtG~v~d--i~~Ia~la~~~gillvv 331 (541)
++..|++...+|.++ .+++++.+ +... -+++++ +|-.|...| -++...+.+..|+.++.
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~Iv---SNsaGs~~d~~~~~a~~~~~~lgIpvl~ 111 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIV---SNSAGSSDDPDGERAEALEKALGIPVLR 111 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEE---ECCCCcccCccHHHHHHHHHhhCCcEEE
Confidence 677788888877541 12222222 1111 135555 555565544 45666666777776554
No 488
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase. These enzymes adopt a TIM barrel structure. IMP dehydrogenase (1.1.1.205 from EC) (IMPDH) catalyzes the rate-limiting reaction of de novo GTP biosynthesis, the NAD-dependent reduction of IMP into XMP []. Inosine 5-phosphate + NAD+ + H2O = xanthosine 5-phosphate + NADH IMP dehydrogenase is associated with cell proliferation and is a possible target for cancer chemotherapy. Mammalian and bacterial IMPDHs are tetramers of identical chains. There are two IMP dehydrogenase isozymes in humans []. IMP dehydrogenase nearly always contains a long insertion that has two CBS domains within it. GMP reductase (1.7.1.7 from EC) catalyzes the irreversible and NADPH-dependent reductive deamination of GMP into IMP []. NADPH + guanosine 5-phosphate = NADP+ + inosine 5-phosphate + NH3 It converts nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and maintains intracellular balance of A and G nucleotides.; GO: 0003824 catalytic activity, 0055114 oxidation-reduction process; PDB: 3FFS_D 1VRD_A 1JCN_B 1EEP_B 3TSB_B 3USB_B 3TSD_A 4FF0_A 4FEZ_A 3KHJ_D ....
Probab=28.23 E-value=66 Score=33.92 Aligned_cols=118 Identities=19% Similarity=0.223 Sum_probs=66.5
Q ss_pred HHhccCCCEEEEcCCCCcchHHHH---HhhcccCC-cEEEEeCCCCHHHHHHhccCCCeeEEEEe-CCCCC------CCc
Q 009172 243 LALVPAGGHIVTTTDCYRKTRIFI---ETVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTE-SPTNP------FLR 311 (541)
Q Consensus 243 ~all~~GD~VIv~~~~y~~~~~~~---~~~l~~~G-i~v~~vd~~dle~Le~ai~~~~tklV~le-sp~NP------tG~ 311 (541)
..|++.|-.+|+-+..|+...... +.+-+.++ +.+.--+..+.+..+.+++.. ...|-+- -|... +|.
T Consensus 114 ~~L~~agvD~ivID~a~g~s~~~~~~ik~ik~~~~~~~viaGNV~T~e~a~~L~~aG-ad~vkVGiGpGsiCtTr~v~Gv 192 (352)
T PF00478_consen 114 EALVEAGVDVIVIDSAHGHSEHVIDMIKKIKKKFPDVPVIAGNVVTYEGAKDLIDAG-ADAVKVGIGPGSICTTREVTGV 192 (352)
T ss_dssp HHHHHTT-SEEEEE-SSTTSHHHHHHHHHHHHHSTTSEEEEEEE-SHHHHHHHHHTT--SEEEESSSSSTTBHHHHHHSB
T ss_pred HHHHHcCCCEEEccccCccHHHHHHHHHHHHHhCCCceEEecccCCHHHHHHHHHcC-CCEEEEeccCCccccccccccc
Confidence 345556755555565665544333 23333444 566544556788888888764 6666662 12211 222
Q ss_pred ccC----HHHHHHHHHhCCCEEEEEcCCC-CCCcccccccCCcEEEECCccccCCCC
Q 009172 312 CVD----VKLVSDLCHKKGAIVCIDGTFA-TPLNQKALSLGADLVLHSATKFIGGHN 363 (541)
Q Consensus 312 v~d----i~~Ia~la~~~gillvvDea~a-~~~~~~~l~~gaDivv~S~sK~lgg~g 363 (541)
=.| +.+.++.++++++++|.|.=.. .+-..+.+..|+|.|. +...|+|.-
T Consensus 193 G~PQ~tAv~~~a~~a~~~~v~iIADGGi~~sGDi~KAla~GAd~VM--lG~llAgt~ 247 (352)
T PF00478_consen 193 GVPQLTAVYECAEAARDYGVPIIADGGIRTSGDIVKALAAGADAVM--LGSLLAGTD 247 (352)
T ss_dssp SCTHHHHHHHHHHHHHCTTSEEEEESS-SSHHHHHHHHHTT-SEEE--ESTTTTTBT
T ss_pred CCcHHHHHHHHHHHhhhccCceeecCCcCcccceeeeeeeccccee--echhhccCc
Confidence 233 5577778888999999998532 2334567888999887 455666554
No 489
>PRK13937 phosphoheptose isomerase; Provisional
Probab=27.82 E-value=5.2e+02 Score=24.30 Aligned_cols=41 Identities=12% Similarity=-0.078 Sum_probs=27.1
Q ss_pred CCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEE
Q 009172 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVL 352 (541)
Q Consensus 308 PtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv 352 (541)
-+|...++-++++.|+++|+.+|.= +.....++..-+|+++
T Consensus 115 ~sG~t~~~~~~~~~ak~~g~~~I~i----T~~~~s~L~~~ad~~l 155 (188)
T PRK13937 115 TSGNSPNVLAALEKARELGMKTIGL----TGRDGGKMKELCDHLL 155 (188)
T ss_pred CCCCcHHHHHHHHHHHHCCCeEEEE----eCCCCChhHHhCCEEE
Confidence 4577788889999999999877751 2222334444456655
No 490
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=27.68 E-value=3e+02 Score=27.12 Aligned_cols=87 Identities=5% Similarity=-0.074 Sum_probs=44.8
Q ss_pred hccCC-CEEEEcCCCCc--chHHHHHhhcccCCcEEEEe-CC-CCHHHHHHhccCCCeeEEEEeCCCCCCCcccC--HHH
Q 009172 245 LVPAG-GHIVTTTDCYR--KTRIFIETVLPKMGITATVI-DP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVD--VKL 317 (541)
Q Consensus 245 ll~~G-D~VIv~~~~y~--~~~~~~~~~l~~~Gi~v~~v-d~-~dle~Le~ai~~~~tklV~lesp~NPtG~v~d--i~~ 317 (541)
+...| |.|++++..|. ....-+...++..|+++... .+ .+.+.++..++.. ..++++ +.++-+|...+ +.+
T Consensus 97 ~~~~Gadgvii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~-~~~l~m-sv~~~~g~~~~~~~~~ 174 (244)
T PRK13125 97 ARDVGADGVLFPDLLIDYPDDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLS-PLFIYY-GLRPATGVPLPVSVER 174 (244)
T ss_pred HHHcCCCEEEECCCCCCcHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhC-CCEEEE-EeCCCCCCCchHHHHH
Confidence 33444 67777653332 11112224567778875543 33 4577888777642 345555 66666675433 232
Q ss_pred HHHHHHhC--CCEEEEEc
Q 009172 318 VSDLCHKK--GAIVCIDG 333 (541)
Q Consensus 318 Ia~la~~~--gillvvDe 333 (541)
..+.+++. +..+++|.
T Consensus 175 ~i~~lr~~~~~~~i~v~g 192 (244)
T PRK13125 175 NIKRVRNLVGNKYLVVGF 192 (244)
T ss_pred HHHHHHHhcCCCCEEEeC
Confidence 22333332 35677775
No 491
>PRK03673 hypothetical protein; Provisional
Probab=27.64 E-value=86 Score=33.64 Aligned_cols=84 Identities=8% Similarity=0.185 Sum_probs=50.1
Q ss_pred cCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeC--CCCHHHHHHhccCC--CeeEEEEeCCCCCCCcccCHHHHHHHH
Q 009172 247 PAGGHIVTTTDCYRKTRIFIETVLPKMGITATVID--PADMEGLEAALNNN--NVSLFFTESPTNPFLRCVDVKLVSDLC 322 (541)
Q Consensus 247 ~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd--~~dle~Le~ai~~~--~tklV~lesp~NPtG~v~di~~Ia~la 322 (541)
.-||+++ ....+..+..++...+...|+++.... .+|.+.|.++++.- +..+|++..-..||-.=.-.+ .+|
T Consensus 8 s~GdEll-~G~i~dtN~~~la~~L~~~G~~v~~~~~v~D~~~~i~~~l~~a~~~~DlVI~tGGlGpt~dD~t~~---avA 83 (396)
T PRK03673 8 STGDEVL-HGQIVDTNAAWLADFFFHQGLPLSRRNTVGDNLDALVAILRERSQHADVLIVNGGLGPTSDDLSAL---AAA 83 (396)
T ss_pred EecccCC-CCeEEEhHHHHHHHHHHHCCCEEEEEEEcCCCHHHHHHHHHHHhccCCEEEEcCCCCCCCcccHHH---HHH
Confidence 3466654 333445556667677888899876553 56788777776421 356888744434443211122 344
Q ss_pred HhCCCEEEEEcC
Q 009172 323 HKKGAIVCIDGT 334 (541)
Q Consensus 323 ~~~gillvvDea 334 (541)
+..|..++.|+.
T Consensus 84 ~a~g~~L~~d~e 95 (396)
T PRK03673 84 TAAGEGLVLHEE 95 (396)
T ss_pred HHcCCCceeCHH
Confidence 556888888876
No 492
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=27.50 E-value=2e+02 Score=28.86 Aligned_cols=92 Identities=18% Similarity=0.323 Sum_probs=49.6
Q ss_pred EEeCCHH-HHHHHHHHHhccCCCEEEEc-CCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCC
Q 009172 229 VIMASGM-SASTVMLLALVPAGGHIVTT-TDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (541)
Q Consensus 229 i~~sSG~-~Ai~~al~all~~GD~VIv~-~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~ 306 (541)
|++.+|+ ++-.+ ...|.+.|..|+++ ...|+. ..+...|......+..|.+.+.+.+.++++++|+- .+
T Consensus 3 ILvlGGT~egr~l-a~~L~~~g~~v~~s~~t~~~~------~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VID--At 73 (256)
T TIGR00715 3 VLLMGGTVDSRAI-AKGLIAQGIEILVTVTTSEGK------HLYPIHQALTVHTGALDPQELREFLKRHSIDILVD--AT 73 (256)
T ss_pred EEEEechHHHHHH-HHHHHhCCCeEEEEEccCCcc------ccccccCCceEEECCCCHHHHHHHHHhcCCCEEEE--cC
Confidence 4555665 54333 33455667666554 334443 22333443334456667777888887655666553 34
Q ss_pred CCCCcccCHHHHHHHHHhCCCEEE
Q 009172 307 NPFLRCVDVKLVSDLCHKKGAIVC 330 (541)
Q Consensus 307 NPtG~v~di~~Ia~la~~~gillv 330 (541)
+|.-..+. +-+.+.|++.|++.+
T Consensus 74 HPfA~~is-~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 74 HPFAAQIT-TNATAVCKELGIPYV 96 (256)
T ss_pred CHHHHHHH-HHHHHHHHHhCCcEE
Confidence 44432211 245567788887665
No 493
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=26.55 E-value=3.8e+02 Score=28.92 Aligned_cols=75 Identities=20% Similarity=0.247 Sum_probs=40.4
Q ss_pred EEEeCCHHHHHHHHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCC
Q 009172 228 TVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPT 306 (541)
Q Consensus 228 ~i~~sSG~~Ai~~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~ 306 (541)
.+++..|-+++.+ ...+.+.|-.|...+.............+...|+++..-...+++.++..+.. ..+|+. +|.
T Consensus 3 v~viG~G~sG~s~-a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~--~d~vv~-s~g 77 (459)
T PRK02705 3 AHVIGLGRSGIAA-ARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQ--PDLVVV-SPG 77 (459)
T ss_pred EEEEccCHHHHHH-HHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhc--CCEEEE-CCC
Confidence 4566666666654 44556778888777754332222111234556888754333344444444443 456666 555
No 494
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=26.33 E-value=3.9e+02 Score=26.38 Aligned_cols=91 Identities=11% Similarity=0.096 Sum_probs=49.7
Q ss_pred HHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCcEEEE-eCC-CCHHHHHHhccCCCeeEEEEeCCCCCCCccc----C
Q 009172 242 LLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATV-IDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCV----D 314 (541)
Q Consensus 242 l~all~~G-D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~-vd~-~dle~Le~ai~~~~tklV~lesp~NPtG~v~----d 314 (541)
+..+.+.| |-|++++..+..... +...++..|++... +.+ ...+.++..++.. ...|++.+.+-.||.-. +
T Consensus 97 i~~~~~aG~~giiipDl~~ee~~~-~~~~~~~~g~~~i~~i~P~T~~~~i~~i~~~~-~~~vy~~s~~g~tG~~~~~~~~ 174 (242)
T cd04724 97 LRDAKEAGVDGLIIPDLPPEEAEE-FREAAKEYGLDLIFLVAPTTPDERIKKIAELA-SGFIYYVSRTGVTGARTELPDD 174 (242)
T ss_pred HHHHHHCCCcEEEECCCCHHHHHH-HHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhC-CCCEEEEeCCCCCCCccCCChh
Confidence 44444555 567776654432222 33456777886654 444 3567777766532 45667666554455432 2
Q ss_pred H-HHHHHHHHhCCCEEEEEcC
Q 009172 315 V-KLVSDLCHKKGAIVCIDGT 334 (541)
Q Consensus 315 i-~~Ia~la~~~gillvvDea 334 (541)
+ +.|.++.+..++++++|.-
T Consensus 175 ~~~~i~~lr~~~~~pI~vggG 195 (242)
T cd04724 175 LKELIKRIRKYTDLPIAVGFG 195 (242)
T ss_pred HHHHHHHHHhcCCCcEEEEcc
Confidence 3 3344444444788888753
No 495
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=26.16 E-value=3.5e+02 Score=28.98 Aligned_cols=76 Identities=14% Similarity=0.117 Sum_probs=42.3
Q ss_pred cCCCEEEEcCCCCcchH-----HHHHhhcccCCcEEEE-eC---CCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHH
Q 009172 247 PAGGHIVTTTDCYRKTR-----IFIETVLPKMGITATV-ID---PADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKL 317 (541)
Q Consensus 247 ~~GD~VIv~~~~y~~~~-----~~~~~~l~~~Gi~v~~-vd---~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~ 317 (541)
++||.|+.+.+..++.. .+....+.+.|+++.. +. ..+.++|...++--+++-++. .+ |.-..+..
T Consensus 317 ~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ip--vH---ge~~~~~~ 391 (422)
T TIGR00649 317 RKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIP--VH---GEYRMLIN 391 (422)
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEe--cC---CcHHHHHH
Confidence 47899998887777755 2222134556776643 11 224455544443212344432 23 66556777
Q ss_pred HHHHHHhCCC
Q 009172 318 VSDLCHKKGA 327 (541)
Q Consensus 318 Ia~la~~~gi 327 (541)
.++++++.|+
T Consensus 392 ~~~~a~~~g~ 401 (422)
T TIGR00649 392 HTKLAEEEGY 401 (422)
T ss_pred HHHHHHHcCC
Confidence 8888887774
No 496
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=25.99 E-value=3e+02 Score=29.89 Aligned_cols=99 Identities=12% Similarity=0.173 Sum_probs=54.8
Q ss_pred HHHHHHHHhccCCCEE-EEcCCCCcch-HHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccC
Q 009172 237 ASTVMLLALVPAGGHI-VTTTDCYRKT-RIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVD 314 (541)
Q Consensus 237 Ai~~al~all~~GD~V-Iv~~~~y~~~-~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~d 314 (541)
+..++.......|..| +++.+.|... ...+.......|+.+.. ..++..+.+.+..++...|++.++..+.-....
T Consensus 240 aaKLA~~~~~~~G~~V~Lit~Dt~R~aA~eQLk~yAe~lgvp~~~--~~~~~~l~~~l~~~~~D~VLIDTaGr~~rd~~~ 317 (432)
T PRK12724 240 IAKLAAKYFLHMGKSVSLYTTDNYRIAAIEQLKRYADTMGMPFYP--VKDIKKFKETLARDGSELILIDTAGYSHRNLEQ 317 (432)
T ss_pred HHHHHHHHHHhcCCeEEEecccchhhhHHHHHHHHHHhcCCCeee--hHHHHHHHHHHHhCCCCEEEEeCCCCCccCHHH
Confidence 3333333334566555 4555556542 22233344555665432 234455555554334688999987755444455
Q ss_pred HHHHHHHHHh------CCCEEEEEcCCCC
Q 009172 315 VKLVSDLCHK------KGAIVCIDGTFAT 337 (541)
Q Consensus 315 i~~Ia~la~~------~gillvvDea~a~ 337 (541)
++++.++.+. ...+||+|.+...
T Consensus 318 l~eL~~~~~~~~~~~~~e~~LVLsAt~~~ 346 (432)
T PRK12724 318 LERMQSFYSCFGEKDSVENLLVLSSTSSY 346 (432)
T ss_pred HHHHHHHHHhhcCCCCCeEEEEEeCCCCH
Confidence 6677666653 3578999988653
No 497
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=25.74 E-value=4.1e+02 Score=28.46 Aligned_cols=108 Identities=19% Similarity=0.260 Sum_probs=64.2
Q ss_pred cEEEeCCHHHHHHHHHHHhccCC-CEEEEcCCCCcchHHHHHhhcccCCcEEEEeCCCCHHHHHHhccCCCeeEEEEeCC
Q 009172 227 STVIMASGMSASTVMLLALVPAG-GHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESP 305 (541)
Q Consensus 227 ~~i~~sSG~~Ai~~al~all~~G-D~VIv~~~~y~~~~~~~~~~l~~~Gi~v~~vd~~dle~Le~ai~~~~tklV~lesp 305 (541)
.+++...|.-+-.. ..-+.+.| .+|.+.+-+-....+.... ....++...+|..|.+++.++|++ ..+|+-.-|
T Consensus 3 ~ilviGaG~Vg~~v-a~~la~~~d~~V~iAdRs~~~~~~i~~~--~~~~v~~~~vD~~d~~al~~li~~--~d~VIn~~p 77 (389)
T COG1748 3 KILVIGAGGVGSVV-AHKLAQNGDGEVTIADRSKEKCARIAEL--IGGKVEALQVDAADVDALVALIKD--FDLVINAAP 77 (389)
T ss_pred cEEEECCchhHHHH-HHHHHhCCCceEEEEeCCHHHHHHHHhh--ccccceeEEecccChHHHHHHHhc--CCEEEEeCC
Confidence 46778877744322 23344455 4666655554333222111 112577888899999999999986 377776666
Q ss_pred CCCCCccc-----------C-------HHHHHHHHHhCCCEEEEEcCCCCCC
Q 009172 306 TNPFLRCV-----------D-------VKLVSDLCHKKGAIVCIDGTFATPL 339 (541)
Q Consensus 306 ~NPtG~v~-----------d-------i~~Ia~la~~~gillvvDea~a~~~ 339 (541)
..-+-.++ | ..++.+.|++.|+..|.+.=+..++
T Consensus 78 ~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPGi 129 (389)
T COG1748 78 PFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPGI 129 (389)
T ss_pred chhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcch
Confidence 64333322 1 2356777778888888776655543
No 498
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=25.64 E-value=4.5e+02 Score=25.48 Aligned_cols=105 Identities=15% Similarity=0.092 Sum_probs=56.8
Q ss_pred HHHHHhccCCCEEEEcCCCCcchHHHHHhhcccCC-cEEEEeCCCCHHHHHHhccCCCeeEEEEeCCCCCCCcccCHHHH
Q 009172 240 VMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMG-ITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLV 318 (541)
Q Consensus 240 ~al~all~~GD~VIv~~~~y~~~~~~~~~~l~~~G-i~v~~vd~~dle~Le~ai~~~~tklV~lesp~NPtG~v~di~~I 318 (541)
....++.+.|=+++=-+..-+.....++.+.+.++ +.+---...+.++++++++.. .+.++ +|+- -+++
T Consensus 24 ~~~~al~~~Gi~~iEit~~t~~a~~~i~~l~~~~~~~~vGAGTVl~~~~a~~a~~aG-A~Fiv--sP~~-------~~~v 93 (204)
T TIGR01182 24 PLAKALIEGGLRVLEVTLRTPVALDAIRLLRKEVPDALIGAGTVLNPEQLRQAVDAG-AQFIV--SPGL-------TPEL 93 (204)
T ss_pred HHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHcC-CCEEE--CCCC-------CHHH
Confidence 34455556563332222122333344434333332 222222346889999998764 55553 6661 2489
Q ss_pred HHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEECCccccC
Q 009172 319 SDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIG 360 (541)
Q Consensus 319 a~la~~~gillvvDea~a~~~~~~~l~~gaDivv~S~sK~lg 360 (541)
.+.|+++|++++-- ++...-.....++|+|++ |.|-
T Consensus 94 ~~~~~~~~i~~iPG-~~TptEi~~A~~~Ga~~v-----KlFP 129 (204)
T TIGR01182 94 AKHAQDHGIPIIPG-VATPSEIMLALELGITAL-----KLFP 129 (204)
T ss_pred HHHHHHcCCcEECC-CCCHHHHHHHHHCCCCEE-----EECC
Confidence 99999999988762 211111234567888876 6664
No 499
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria. Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane
Probab=25.62 E-value=6.4e+02 Score=25.30 Aligned_cols=20 Identities=10% Similarity=0.042 Sum_probs=9.9
Q ss_pred HHHHHHHHHhCC-CEEEEEcC
Q 009172 315 VKLVSDLCHKKG-AIVCIDGT 334 (541)
Q Consensus 315 i~~Ia~la~~~g-illvvDea 334 (541)
+.++.+..++-+ +.++.|..
T Consensus 181 ~~~~~~~Lk~g~~v~~l~Dq~ 201 (295)
T PF03279_consen 181 IRELIRALKEGGIVGLLGDQD 201 (295)
T ss_pred HHHHHHHhccCCEEEEEECCC
Confidence 445555555444 33446654
No 500
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=25.45 E-value=5.2e+02 Score=23.77 Aligned_cols=42 Identities=21% Similarity=0.128 Sum_probs=26.5
Q ss_pred CCCcccCHHHHHHHHHhCCCEEEEEcCCCCCCcccccccCCcEEEE
Q 009172 308 PFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLH 353 (541)
Q Consensus 308 PtG~v~di~~Ia~la~~~gillvvDea~a~~~~~~~l~~gaDivv~ 353 (541)
-.|...++-++++.|+++|+.+|. -+.....++...+|+++.
T Consensus 81 ~sG~t~~~i~~~~~ak~~g~~ii~----IT~~~~s~la~~ad~~l~ 122 (179)
T TIGR03127 81 GSGETESLVTVAKKAKEIGATVAA----ITTNPESTLGKLADVVVE 122 (179)
T ss_pred CCCCcHHHHHHHHHHHHCCCeEEE----EECCCCCchHHhCCEEEE
Confidence 357778888999999999976653 111223344444676553
Done!