BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009173
(541 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 181/365 (49%), Gaps = 73/365 (20%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC--DERLITVTAS 238
++ +E+ F++LC + VIGKGG+ I+ ++ +G+ I V + +C DE +I VTA+
Sbjct: 307 SRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTAT 366
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
E P+ S A +AV+L+ + + +E V +L+V+S +GC++GK G+
Sbjct: 367 ESPDDMKSMAVEAVLLLQEYINDEDAEN-----------VKMQLLVSSKVIGCVIGKSGS 415
Query: 299 IISEMRKVTGTSIRIISDQLLKCIS--ENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
+I+E+RK T +I CIS + D +V++SGE S V+DA+ + RLR++ G
Sbjct: 416 VINEIRKRTNANI---------CISKGKKDDLVEVSGEVSSVRDALIQIVLRLREDVL-G 465
Query: 357 TLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQGMDHLGLSHSLD 416
++ TR P +R D SF SS A ++ P M
Sbjct: 466 DKDSVATR---------KPPAR-TDNCSFLSGSSNA---GYTLPSFMSSM---------- 502
Query: 417 CPSSPKLWTAQTVTGVHLRGSSDVGRGWSQGLSHHKGGLELGSG---SKSAIVTNTTVEI 473
+ +G H GS G LGS S + +++ +EI
Sbjct: 503 ----------ASTSGFHGYGSFPAGDNV------------LGSTGPYSYGRLPSSSALEI 540
Query: 474 IVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQSLLQ 533
++P + + V G+ G NL +R+ISGA + + + D I ++SGT ++ + A++L+Q
Sbjct: 541 LIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLSGTLEQMRCAENLVQ 600
Query: 534 AFILT 538
AF+++
Sbjct: 601 AFVMS 605
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 69/394 (17%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D + + V +RILC D VG VIGK G +I A++ A I V + C +R+IT+
Sbjct: 28 DKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYC 87
Query: 238 S--EGPE------SRYSP---AQKAVVLVFSRLI----EGTSEKGLDFSSNKGLLVNARL 282
S E E S P AQ A++ V+ ++ E ++ +D NK RL
Sbjct: 88 SVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNK----ECRL 143
Query: 283 VVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLK----CISENDRVVQISGEFSKV 338
+V +Q L+GK G I +R+ T S++++S + C E D VV ISGE V
Sbjct: 144 LVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESV 203
Query: 339 KDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLK-DPASFGV-HSSVAVSHD 396
K A++ V S+++ + +P + D S V +SV V D
Sbjct: 204 KQALFAV---------------------SAIMYKINPRENIPLDSTSQDVPAASVIVPSD 242
Query: 397 FS-----QPPLTQGMDHLGLSHSLDCPSSPKLWTAQTVTGVHLRGSSDVG-RGWSQGLSH 450
S Q DH+ L PS + G ++ V S ++H
Sbjct: 243 LSNSVYPQTGFYSNQDHI-LQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTH 301
Query: 451 HKGGLELGSGSKSAIVTNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPR-- 508
GG S+ +++ P I V G+ GS + R+R+ SG+ + V++ R
Sbjct: 302 GFGG--------SSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTK 353
Query: 509 LGSTDRIVVISGT--PDETQA----AQSLLQAFI 536
G + +++++ T PD+ ++ A LLQ +I
Sbjct: 354 CGDDECVIIVTATESPDDMKSMAVEAVLLLQEYI 387
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 164/360 (45%), Gaps = 38/360 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSP---YSRLKDPASFG-VHSSVAVSHDFSQPPL----TQGM-----DHLGLS 412
+SS + YS D ASF S+ ++ D PPL QG L
Sbjct: 183 SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKL 242
Query: 413 HSLDCPSSPKLWTAQTVTGVHLRGSSDVGRGWSQGLSHHKGGLELGSGSKSAIVTNTTVE 472
H L S T + SS +G+ GL A T+ E
Sbjct: 243 HQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLD--------------ASAQTTSHE 288
Query: 473 IIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQSLL 532
+ +P ++IG + G G+ + +RQ+SGA++ + P GSTDR V I+G+ AQ L+
Sbjct: 289 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 348
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 116 EALSIETQHRLFGAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVA 175
EA +I+ Q+ A+ Q L LH + Q + +T ++ S + + P A
Sbjct: 224 EAYTIQGQY----AIPQPDLTKLHQLAMQQSHFPMTHG-NTGFSGIESSSPEV--KGYWA 276
Query: 176 TLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV 235
LDA Q S + ND +G +IG+ G I ++ +GA I + + +R +T+
Sbjct: 277 GLDASAQT--TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTI 334
Query: 236 TAS 238
T S
Sbjct: 335 TGS 337
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 167/369 (45%), Gaps = 57/369 (15%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G V + V + + + TL+ +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLE-----TLSQSPQGR 177
Query: 366 TSSVLTETSPYS----------RLKDPASFGVHSSVAVSHDFSQPPLTQGMDHLGLSHSL 415
++ + P S R D A + H++ HD PPL
Sbjct: 178 VMTIPYQPMPASSPVICAGGQDRCSDAAGY-PHAT----HDLEGPPL------------- 219
Query: 416 DCPSSPKLWTAQTVTGVHLRGSSDVGRGWSQGLSHHKGGLELGSGSKSAIV--------- 466
+ + T++ + L + V R S H G G S S V
Sbjct: 220 ---DAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDA 276
Query: 467 -TNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDET 525
T TT E+ +P N+IG + G G+N+ +RQ+SGA++ + P GS+ R V I+G+
Sbjct: 277 STQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASI 336
Query: 526 QAAQSLLQA 534
AQ L+ A
Sbjct: 337 SLAQYLINA 345
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 175 ATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLIT 234
A+LDA TQ + + N+ +G +IG+ G I ++ +GA I + + R +T
Sbjct: 272 ASLDASTQ---TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 328
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFS 271
+T G + S AQ L+ +RL +SEKG+ S
Sbjct: 329 IT---GSAASISLAQ---YLINARL---SSEKGMGCS 356
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 167/369 (45%), Gaps = 57/369 (15%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G V + V + + + TL+ +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLE-----TLSQSPQGR 177
Query: 366 TSSVLTETSPYS----------RLKDPASFGVHSSVAVSHDFSQPPLTQGMDHLGLSHSL 415
++ + P S R D A + H++ HD PPL
Sbjct: 178 VMTIPYQPMPASSPVICAGGQDRCSDAAGY-PHAT----HDLEGPPL------------- 219
Query: 416 DCPSSPKLWTAQTVTGVHLRGSSDVGRGWSQGLSHHKGGLELGSGSKSAIV--------- 466
+ + T++ + L + V R S H G G S S V
Sbjct: 220 ---DAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDA 276
Query: 467 -TNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDET 525
T TT E+ +P N+IG + G G+N+ +RQ+SGA++ + P GS+ R V I+G+
Sbjct: 277 STQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASI 336
Query: 526 QAAQSLLQA 534
AQ L+ A
Sbjct: 337 SLAQYLINA 345
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 175 ATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLIT 234
A+LDA TQ + + N+ +G +IG+ G I ++ +GA I + + R +T
Sbjct: 272 ASLDASTQ---TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 328
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFS 271
+T G + S AQ L+ +RL +SEKG+ S
Sbjct: 329 IT---GSAASISLAQ---YLINARL---SSEKGMGCS 356
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 167/369 (45%), Gaps = 57/369 (15%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G V + V + + + TL+ +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLE-----TLSQSPQGR 177
Query: 366 TSSVLTETSPYS----------RLKDPASFGVHSSVAVSHDFSQPPLTQGMDHLGLSHSL 415
++ + P S R D A + H++ HD PPL
Sbjct: 178 VMTIPYQPMPASSPVICAGGQDRCSDAAGY-PHAT----HDLEGPPL------------- 219
Query: 416 DCPSSPKLWTAQTVTGVHLRGSSDVGRGWSQGLSHHKGGLELGSGSKSAIV--------- 466
+ + T++ + L + V R S H G G S S V
Sbjct: 220 ---DAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDA 276
Query: 467 -TNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDET 525
T TT E+ +P N+IG + G G+N+ +RQ+SGA++ + P GS+ R V I+G+
Sbjct: 277 STQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASI 336
Query: 526 QAAQSLLQA 534
AQ L+ A
Sbjct: 337 SLAQYLINA 345
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 175 ATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLIT 234
A+LDA TQ + + N+ +G +IG+ G I ++ +GA I + + R +T
Sbjct: 272 ASLDASTQ---TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 328
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFS 271
+T G + S AQ L+ +RL +SEKG+ S
Sbjct: 329 IT---GSAASISLAQ---YLINARL---SSEKGMGCS 356
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 167/369 (45%), Gaps = 57/369 (15%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G V + V + + + TL+ +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLE-----TLSQSPQGR 177
Query: 366 TSSVLTETSPYS----------RLKDPASFGVHSSVAVSHDFSQPPLTQGMDHLGLSHSL 415
++ + P S R D A + H++ HD PPL
Sbjct: 178 VMTIPYQPMPASSPVICAGGQDRCSDAAGY-PHAT----HDLEGPPL------------- 219
Query: 416 DCPSSPKLWTAQTVTGVHLRGSSDVGRGWSQGLSHHKGGLELGSGSKSAIV--------- 466
+ + T++ + L + V R S H G G S S V
Sbjct: 220 ---DAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDA 276
Query: 467 -TNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDET 525
T TT E+ +P N+IG + G G+N+ +RQ+SGA++ + P GS+ R V I+G+
Sbjct: 277 STQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASI 336
Query: 526 QAAQSLLQA 534
AQ L+ A
Sbjct: 337 SLAQYLINA 345
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 175 ATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLIT 234
A+LDA TQ + + N+ +G +IG+ G I ++ +GA I + + R +T
Sbjct: 272 ASLDASTQ---TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 328
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFS 271
+T G + S AQ L+ +RL +SEKG+ S
Sbjct: 329 IT---GSAASISLAQ---YLINARL---SSEKGMGCS 356
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 158/358 (44%), Gaps = 53/358 (14%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTA 361
E+R+ TG +++ D L + +R V ISG + V + + ++ G
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 210
Query: 362 RTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQGMDHLGLSHSLDCPSSP 421
R + S+ + ++ + A+ H D L H L +P
Sbjct: 211 RPKPASTPVI-------FAGGQAYTIQGQYAIPHP----------DQLTKLHQLAMQQTP 253
Query: 422 KLWTAQTVTG-----VHLRGSSDVGRGWSQGLSHHKGGLELGSGSKSAIVTNTTVEIIVP 476
QT + L S + +Q L GL+ A +T E+ +P
Sbjct: 254 FPPLGQTNPAFPGEKLPLHSSEE-----AQNLMGQSSGLD-------ASPPASTHELTIP 301
Query: 477 ENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQSLLQA 534
++IG + G G+ + +RQ+SGA++ + GS++R + I+GTP AQ L+ A
Sbjct: 302 NDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 359
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 32.7 bits (73), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 12/94 (12%)
Query: 448 LSHH---KGGLELGSG-SKSAIVTNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVI 503
LSHH + G + S S+ + T+ +++ +GS+ G+ G + ++R+ SGA++
Sbjct: 21 LSHHPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARIN 80
Query: 504 VHEPRLGSTDRIVVISGTPDETQAAQSLLQAFIL 537
+ E +RIV I+G D ++ +AF +
Sbjct: 81 ISEGNC--PERIVTITGPTD------AIFKAFAM 106
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 156/354 (44%), Gaps = 45/354 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDAI 100
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + + V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 101 F---KAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R V ISG + V + + ++ G R +
Sbjct: 158 STGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 214
Query: 366 TSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQGMDHLGLSHSLDCPSSPKLWT 425
S+ + ++ + A+ H D L H L +P
Sbjct: 215 ASTPVI-------FAGGQAYTIQGQYAIPHP----------DQLTKLHQLAMQQTPFPPL 257
Query: 426 AQTVTG-----VHLRGSSDVGRGWSQGLSHHKGGLELGSGSKSAIVTNTTVEIIVPENVI 480
QT + L S + +Q L GL+ A +T E+ +P ++I
Sbjct: 258 GQTNPAFPGEKLPLHSSEE-----AQNLMGQSSGLD-------ASPPASTHELTIPNDLI 305
Query: 481 GSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQSLLQA 534
G + G G+ + +RQ+SGA++ + GS++R + I+GTP AQ L+ A
Sbjct: 306 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 359
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 448 LSHHK----GGLELGSGSKSAIVTNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVI 503
LSHH GG S+ + T+ +++ +GS+ G+ G + ++R+ SGA++
Sbjct: 21 LSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARIN 80
Query: 504 VHEPRLGSTDRIVVISGTPDETQAAQSLLQAFIL 537
+ E +RIV I+G D ++ +AF +
Sbjct: 81 ISEGNC--PERIVTITGPTD------AIFKAFAM 106
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 165/366 (45%), Gaps = 47/366 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT----GRLRDNHFSGTLNTA 361
TG +++ D L + +R + I+G + + V + L + G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 182
Query: 362 RTRSTSSVLTETSP---YSRLKDPASFG-VHSSVAVSHDFSQPPL----TQG-----MDH 408
R + +SS + YS D ASF S+ ++ D PPL QG
Sbjct: 183 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPD 242
Query: 409 LGLSHSLDCPSS--PKLWTAQTVTGVHLRGSSDVGRGWSQGLSHHKGGLELGSGSKSAIV 466
L H L S P +G+ S +V W GL+ A
Sbjct: 243 LTKLHQLAMQQSHFPMTHGNTGFSGIE-SSSPEVKGYW---------GLD-------ASA 285
Query: 467 TNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQ 526
T+ E+ +P ++IG + G G+ + +RQ+SGA++ + P GSTDR V I+G+
Sbjct: 286 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASIS 345
Query: 527 AAQSLL 532
AQ L+
Sbjct: 346 LAQYLI 351
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 280 GLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 332
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 333 RQVTITGSAASISLAQYLINVRL 355
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 116 EALSIETQHRLFGAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVA 175
EA +I+ Q+ A+ Q L LH + Q + +T + S + S E
Sbjct: 228 EAYTIQGQY----AIPQPDLTKLHQLAMQQSHFPMTHGNTG----FSGIESSSPEVKGYW 279
Query: 176 TLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV 235
LDA Q S + ND +G +IG+ G I ++ +GA I + + +R +T+
Sbjct: 280 GLDASAQT--TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTI 337
Query: 236 TAS 238
T S
Sbjct: 338 TGS 340
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 166/396 (41%), Gaps = 68/396 (17%)
Query: 167 LSLESDRVATLDARTQQQ-----------EVSFRILCSNDKVGAVIGKGGTIIRALQSEA 215
L E RVA DA + +V R+LC ++G G I ++SE
Sbjct: 37 LEAEIKRVALKDADSHSDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSET 96
Query: 216 GAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIE--GTSEKGLDFSSN 273
A I++ + ER++ V + KA ++ L+E G + G D +
Sbjct: 97 SARINISNNIRGVPERIVYVRGT------CDDVAKAYGMIVRALLEEHGNEDNGEDIEIS 150
Query: 274 KGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
LL+ L +GC++GK G+ + E+ ++ + +QLL NDR++ I+G
Sbjct: 151 INLLIPHHL------MGCIIGKRGSRLREIEDLSAAKLFASPNQLLLS---NDRILTING 201
Query: 334 EFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAV 393
V DA++ T + S TL + S + + Y P F +SV +
Sbjct: 202 ----VPDAIHIATF-----YISQTLLNFQMESPQKNVKRSIYYQ----PTQF---NSVLI 245
Query: 394 SHDFSQP------------PLTQGMDH-----LGLSHSLDCPSSPKLWTAQTVTGVHLRG 436
H SQP P + + + L +S +L ++P+ TA +
Sbjct: 246 DH--SQPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQP 303
Query: 437 SSDVGRGWSQGLSHHKGGLELGSGSKSAIVTNTTVEIIVPENVIGSVYGENGSNLLRLRQ 496
+ + ++ G + + ++ EI + E +G+V G++G ++ +++
Sbjct: 304 NFVI-----PNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKE 358
Query: 497 ISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQSLL 532
+G +I+ +P GS++R + I GT +QAA L+
Sbjct: 359 STGCSIIIQDPVEGSSERRLTIRGTFMASQAAIMLI 394
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 432 VHLRGS-SDVGRGWSQGLSHHKGGLELGSGSKSAIVTNTTVEIIVPENVIGSVYGENGSN 490
V++RG+ DV + + + + LE + ++ +++P +++G + G+ GS
Sbjct: 114 VYVRGTCDDVAKAYGMIV---RALLEEHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSR 170
Query: 491 LLRLRQISGAKVIVHEPRLG-STDRIVVISGTPDETQAA-----QSLLQAFILTGP 540
L + +S AK+ +L S DRI+ I+G PD A Q+LL F + P
Sbjct: 171 LREIEDLSAAKLFASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLN-FQMESP 225
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 161/382 (42%), Gaps = 70/382 (18%)
Query: 154 PSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQS 213
P+S + +SA P+ DA Q+++ R L S + G +IGK G + L+S
Sbjct: 71 PTSQVPPISAKPPMD---------DATYATQQLTLRALLSTREAGIIIGKAGKNVAELRS 121
Query: 214 EAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSN 273
V +P +R++T++ GP A + ++ +F++ T+ G +N
Sbjct: 122 TTNVKAGVTKAVPNVHDRVLTIS---GPLENVVRAYRFIIDIFAK--NSTNPDGTPSDAN 176
Query: 274 KGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
+ RL++A + +G ++G+ G I ++ S R+I+ + + S +R V+I G
Sbjct: 177 TPRKL--RLLIAHSLMGSIIGRNGLRIKLIQD--KCSCRMIASKDMLPQS-TERTVEIHG 231
Query: 334 EFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAV 393
+ A++ + L D+ R +V +P SRL P S+A
Sbjct: 232 TVDNLHAAIWEIGKCLIDDW---------ERGAGTVF--YNPVSRLTQPL-----PSLAS 275
Query: 394 SHDFSQPPLTQGMDHLGLSHSLDCPSSPKLWTAQTVTGVHLRGSSDVGRGWSQGLSHHKG 453
+ Q + P++P S+ G + +
Sbjct: 276 TASPQQ---------------VSPPAAP---------------STTSGEAIPENFVSY-- 303
Query: 454 GLELGSGSKSAIVTNTTV--EIIVPENVIGSVYGENGSNLLRLRQISGAKV-IVHEPRLG 510
G ++ ++ + V I +P +++G + G GS + +R+ SG+K+ I EP
Sbjct: 304 GAQVFPATQMPFLQQPKVTQNISIPADMVGCIIGRGGSKISEIRRTSGSKISIAKEPHDE 363
Query: 511 STDRIVVISGTPDETQAAQSLL 532
+ +R+ I+GT +E + A LL
Sbjct: 364 TGERMFTITGTHEENEKALFLL 385
Score = 40.4 bits (93), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 17/108 (15%)
Query: 154 PSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQS 213
P + +SY + V P AT QQ +V+ I D VG +IG+GG+ I ++
Sbjct: 297 PENFVSYGAQVFP--------ATQMPFLQQPKVTQNISIPADMVGCIIGRGGSKISEIRR 348
Query: 214 EAGAFISVGATMP--ECDERLITVTASEGPESRYSPAQKAVVLVFSRL 259
+G+ IS+ A P E ER+ T+T + + +KA+ L++ +L
Sbjct: 349 TSGSKISI-AKEPHDETGERMFTITGT------HEENEKALFLLYQQL 389
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + S V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 472 EIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQSL 531
E +VP ++IG V G GS + +RQ+SGA + + G+ +R V I+G+P AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 532 LQAFILTGPS 541
+ A + T S
Sbjct: 305 ITACLETAKS 314
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 56/214 (26%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTASEGPESR 244
V+ R++ + G++IGK GT I+ ++ GA + V G +P ER +TV+ P++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGV--PDAI 159
Query: 245 Y------------SPAQKAVVLVFSRLIEGT----SEKGLDFSSNKGLLVNAR------- 281
SP + A + L GT + +G G + A
Sbjct: 160 ILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQL 219
Query: 282 --------------------------LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+V ++ +GC++G+ G+ ISE+R+++G I+I +
Sbjct: 220 SGHAVPFASPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 316 DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+ +R V I+G + A Y +T L
Sbjct: 280 ----QAEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 39.7 bits (91), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRL-GSTDRIVVISGTPDETQAA 528
T+ +++P + GS+ G+ G+ + +R+ +GA+V V L ST+R V +SG PD
Sbjct: 103 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 162
Query: 529 QSLLQAFILTGP 540
+ A IL P
Sbjct: 163 VRQICAVILESP 174
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V +D TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGMDPSTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 159
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 472 EIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQSL 531
E +VP ++IG V G GS + +RQ+SGA + + G+ +R V I+G+P AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 532 LQAFILTGPS 541
+ A + T S
Sbjct: 305 ITACLETAKS 314
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 56/214 (26%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTASEGPESR 244
V+ R++ + G++IGK GT I+ ++ GA + V G +P ER +TV+ P++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGV--PDAI 159
Query: 245 Y------------SPAQKAVVLVFSRLIEGT----SEKGLDFSSNKGLLVNAR------- 281
SP + A + L GT + +G G + A
Sbjct: 160 ILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQL 219
Query: 282 --------------------------LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+V ++ +GC++G+ G+ ISE+R+++G I+I +
Sbjct: 220 SGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 316 DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+ +R V I+G + A Y +T L
Sbjct: 280 ----QAEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 39.7 bits (91), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRL-GSTDRIVVISGTPDETQAA 528
T+ +++P + GS+ G+ G+ + +R+ +GA+V V L ST+R V +SG PD
Sbjct: 103 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 162
Query: 529 QSLLQAFILTGP 540
+ A IL P
Sbjct: 163 VRQICAVILESP 174
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPSTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 159
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 472 EIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQSL 531
E +VP ++IG V G GS + +RQ+SGA + + G+ +R V I+G+P AQ L
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 532 LQAFILTGPS 541
+ A + T S
Sbjct: 305 ITACLETAKS 314
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 56/214 (26%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTASEGPESR 244
V+ R++ + G++IGK GT I+ ++ GA + V G +P ER +TV+ P++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGV--PDAI 159
Query: 245 Y------------SPAQKAVVLVFSRLIEGT----SEKGLDFSSNKGLLVNAR------- 281
SP + A + L GT + +G G + A
Sbjct: 160 ILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQL 219
Query: 282 --------------------------LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+V ++ +GC++G+ G+ ISE+R+++G I+I +
Sbjct: 220 SSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 316 DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+ +R V I+G + A Y +T L
Sbjct: 280 ----QAEGAGERHVTITGSPVSIALAQYLITACL 309
Score = 39.7 bits (91), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRL-GSTDRIVVISGTPDETQAA 528
T+ +++P + GS+ G+ G+ + +R+ +GA+V V L ST+R V +SG PD
Sbjct: 103 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 162
Query: 529 QSLLQAFILTGP 540
+ A IL P
Sbjct: 163 VRQICAVILESP 174
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPGTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQ 529
T ++ +P+++ GS+ G+ G + ++R SGA + + EP GS DRI+ I+GT D+ Q AQ
Sbjct: 353 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 412
Query: 530 SLLQ 533
LLQ
Sbjct: 413 YLLQ 416
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 27/187 (14%)
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
+ RP + A +R + V RIL + GAVIGKGG I+AL+++ A +S
Sbjct: 15 TNGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVS 74
Query: 221 V-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSE----KGLDFSSNKG 275
V ++ P ER+++++A + + + ++I E KG DF
Sbjct: 75 VPDSSGP---ERILSISAD----------TETIGEILKKIIPTLEEYQHYKGSDFD---- 117
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
RL++ + G ++G G I E+R+ T T+I++ + C DRVV I G+
Sbjct: 118 --CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---CCPHSTDRVVLIGGKP 172
Query: 336 SKVKDAV 342
+V + +
Sbjct: 173 DRVVECI 179
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 259 LIEGTSEKGLDFSSNKGL---------LVNARLVVASNQVGCLLGKGGTIISEMRKVTGT 309
L EG S G D+S G ++ ++ + + G ++GKGG I ++R +G
Sbjct: 326 LFEGGS--GYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGA 383
Query: 310 SIRIISDQLLKCISENDRVVQISGEFSKVKDAVY 343
SI+I D+ L+ DR++ I+G ++++A Y
Sbjct: 384 SIKI--DEPLE--GSEDRIITITGTQDQIQNAQY 413
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 405
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQ 529
T ++ +P+++ GS+ G+ G + ++R SGA + + EP GS DRI+ I+GT D+ Q AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 530 SLLQ 533
LLQ
Sbjct: 449 YLLQ 452
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTAS----------------EGPESRYSPAQKAVVL 254
+++ A +SV ++ P ER+++++A EG + SP + +
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISADIETIGEILKKIIPTLEEGLQLP-SPTATSQLP 124
Query: 255 VFSRLIEGTSE---KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSI 311
+ S +E + KG DF RL++ + G ++G G I E+R+ T T+I
Sbjct: 125 LESDAVECLNYQHFKGSDFD------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTI 178
Query: 312 RIISDQLLKCISENDRVVQISGEFSKVKDAV 342
++ + C DRVV I G+ +V + +
Sbjct: 179 KLFQE---CCPHSTDRVVLIGGKPDRVVECI 206
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 440
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 441 QDQIQNAQY 449
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQ 529
T ++ +P+++ GS+ G+ G + ++R SGA + + EP GS DRI+ I+GT D+ Q AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 530 SLLQ 533
LLQ
Sbjct: 449 YLLQ 452
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTAS----------------EGPESRYSPAQKAVVL 254
+++ A +SV ++ P ER+++++A EG + SP + +
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISADIETIGEILKKIIPTLEEGLQLP-SPTATSQLP 124
Query: 255 VFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSI 311
+ S +E + KG DF RL++ + G ++G G I E+R+ T T+I
Sbjct: 125 LESDAVECLNYQHYKGSDFD------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTI 178
Query: 312 RIISDQLLKCISENDRVVQISGEFSKVKDAV 342
++ + C DRVV I G+ +V + +
Sbjct: 179 KLFQE---CCPHSTDRVVLIGGKPDRVVECI 206
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 440
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 441 QDQIQNAQY 449
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQ 529
T ++ +P+++ GS+ G+ G + ++R SGA + + EP GS DRI+ I+GT D+ Q AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 530 SLLQ 533
LLQ
Sbjct: 449 YLLQ 452
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTAS----------------EGPESRYSPAQKAVVL 254
+++ A +SV ++ P ER+++++A EG + SP + +
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISADIETIGEILKKIIPTLEEGLQLP-SPTATSQLP 124
Query: 255 VFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSI 311
+ S +E + KG DF RL++ + G ++G G I E+R+ T T+I
Sbjct: 125 LESDAVECLNYQHYKGSDFD------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTI 178
Query: 312 RIISDQLLKCISENDRVVQISGEFSKVKDAV 342
++ + C DRVV I G+ +V + +
Sbjct: 179 KLFQE---CCPHSTDRVVLIGGKPDRVVECI 206
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 440
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 441 QDQIQNAQY 449
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQ 529
T ++ +P+++ GS+ G+ G + ++R SGA + + EP GS DRI+ I+GT D+ Q AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 530 SLLQ 533
LLQ
Sbjct: 449 YLLQ 452
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTAS----------------EGPESRYSPAQKAVVL 254
+++ A +SV ++ P ER+++++A EG + SP + +
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISADIETIGEILKKIIPTLEEGLQLP-SPTATSQLP 124
Query: 255 VFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSI 311
+ S +E + KG DF RL++ + G ++G G I E+R+ T T+I
Sbjct: 125 LESDAVECLNYQHYKGSDFD------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTI 178
Query: 312 RIISDQLLKCISENDRVVQISGEFSKVKDAV 342
++ + C DRVV I G+ +V + +
Sbjct: 179 KLFQE---CCPHSTDRVVLIGGKPDRVVECI 206
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 440
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 441 QDQIQNAQY 449
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQ 529
T ++ +P+++ GS+ G+ G + ++R SGA + + EP GS DRI+ I+GT D+ Q AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 530 SLLQ 533
LLQ
Sbjct: 449 YLLQ 452
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTAS----------------EGPESRYSPAQKAVVL 254
+++ A +SV ++ P ER+++++A EG + SP + +
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISADIETIGEILKKIIPTLEEGLQLP-SPTATSQLP 124
Query: 255 VFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSI 311
+ S +E + KG DF RL++ + G ++G G I E+R+ T T+I
Sbjct: 125 LESDAVECLNYQHYKGSDFD------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTI 178
Query: 312 RIISDQLLKCISENDRVVQISGEFSKVKDAV 342
++ + C DRVV I G+ +V + +
Sbjct: 179 KLFQE---CCPQSTDRVVLIGGKPDRVVECI 206
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 440
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 441 QDQIQNAQY 449
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQ 529
T ++ +P+++ GS+ G+ G + ++R SGA + + EP GS DRI+ I+GT D+ Q AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 530 SLLQ 533
LLQ
Sbjct: 449 YLLQ 452
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTAS----------------EGPESRYSPAQKAVVL 254
+++ A +SV ++ P ER+++++A EG + SP + +
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISADIETIGEILKKIIPTLEEGLQLP-SPTATSQLP 124
Query: 255 VFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSI 311
+ S +E + KG DF RL++ + G ++G G I E+R+ T T+I
Sbjct: 125 LESDAVECLNYQHYKGSDFD------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTI 178
Query: 312 RIISDQLLKCISENDRVVQISGEFSKVKDAV 342
++ + C DRVV I G+ +V + +
Sbjct: 179 KLFQE---CCPHSTDRVVLIGGKPDRVVECI 206
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 440
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 441 QDQIQNAQY 449
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQ 529
T ++ +P+++ GS+ G+ G + ++R SGA + + EP GS DRI+ I+GT D+ Q AQ
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 530 SLLQ 533
LLQ
Sbjct: 449 YLLQ 452
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTAS----------------EGPESRYSPAQKAVVL 254
+++ A +SV ++ P ER+++++A EG + SP + +
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISADIETIGEILKKIIPTLEEGLQLP-SPTATSQLP 124
Query: 255 VFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSI 311
+ S +E + KG DF RL++ + G ++G G I E+R+ T T+I
Sbjct: 125 LESDAVECLNYQHYKGSDFD------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTI 178
Query: 312 RIISDQLLKCISENDRVVQISGEFSKVKDAV 342
++ + C DRVV I G+ +V + +
Sbjct: 179 KLFQE---CCPHSTDRVVLIGGKPDRVVECI 206
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 385 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 440
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 441 QDQIQNAQY 449
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEG 240
+Q+ VS + VGA+IGK G I+ L AGA I + A P+ ER++ +T
Sbjct: 419 EQETVS--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP-- 474
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
PE+++ KA +F +L E F+ + + + A + V S+ G ++GKGG +
Sbjct: 475 PEAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTV 525
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
+E++ +T + + DQ EN+ V V+I G F
Sbjct: 526 NELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 558
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
++ +Q + RIL VGA+IGK G I+ + + + + + GA E+
Sbjct: 180 SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAA-----EKP 234
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
+T+ A+ PE +A ++ + + E L V +++ + VG L
Sbjct: 235 VTIHAT--PEG----TSEACRMILEIMQKEADETKLAEE------VPLKILAHNGFVGRL 282
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
+GK G + ++ TGT I I S Q L I +R + + G +A + +LR+
Sbjct: 283 IGKEGRNLKKIEHETGTKITISSLQDL-SIYNPERTITVRGTIEACANAEIEIMKKLRE 340
Score = 36.2 bits (82), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGS--TDRIVVISGTPDETQA 527
TV + +P +G++ G+ G+++ +L + +GA + + P G ++R+V+I+G P+
Sbjct: 422 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI-APAEGPDVSERMVIITGPPEAQFK 480
Query: 528 AQ 529
AQ
Sbjct: 481 AQ 482
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 426 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 482
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 483 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 533
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 534 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 565
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 30/182 (16%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
++ +Q + RIL VGA+IGK G I+ + + + + + GA E+
Sbjct: 187 SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAA-----EKP 241
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQV 289
+T+ A+ PE S A + ++ + + + T E L ++ GL V
Sbjct: 242 VTIHAT--PEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGL------------V 286
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G L+GK G + ++ TGT I I S Q L I +R + + G A + +L
Sbjct: 287 GRLIGKEGRNLKKIEHETGTKITISSLQDL-SIYNPERTITVKGTVEACASAEIEIMKKL 345
Query: 350 RD 351
R+
Sbjct: 346 RE 347
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGS--TDRIVVISGTPDETQAA 528
V + +P +G++ G+ G+++ +L + +GA + + P G ++R+V+I+G P+ A
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI-APAEGPDVSERMVIITGPPEAQFKA 488
Query: 529 Q 529
Q
Sbjct: 489 Q 489
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 383 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 439
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 440 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 490
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 491 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 522
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 330
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A + + +L E L +++ G +
Sbjct: 331 ----VEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 386
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 443
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 444 KAQGRIFGKLKEENF 458
Score = 37.0 bits (84), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 30/182 (16%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
++ +Q + RIL VGA+IGK G I+ + + + + + GA E+
Sbjct: 187 SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAA-----EKP 241
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQV 289
+T+ A+ PE S A + ++ + + + T E L ++ GL V
Sbjct: 242 VTIHAT--PEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGL------------V 286
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G L+GK G + ++ TGT I I S Q L I +R + + G A + +L
Sbjct: 287 GRLIGKEGRNLKKIEHETGTKITISSLQDL-SIYNPERTITVKGTVEACASAEIEIMKKL 345
Query: 350 RD 351
R+
Sbjct: 346 RE 347
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGS--TDRIVVISGTPDETQAA 528
V + +P +G++ G+ G+++ +L + +GA + + P G ++R+V+I+G P+ A
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI-APAEGPDVSERMVIITGPPEAQFKA 445
Query: 529 Q 529
Q
Sbjct: 446 Q 446
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 429 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP--PEAQF----KAQGRI 482
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + A + V S G ++GKGG ++E++ +T + +
Sbjct: 483 YGKLKEENF-----FGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 537
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 538 DQ---TPDENDQVVVKITGHF 555
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERLITVT 236
Q EV R+L VGA+IGK G IR + + + I + GA E+ IT+
Sbjct: 202 QSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAA-----EKPITIH 256
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
++ PE S A K ++ + + + T F+ + +++ +N VG L+GK
Sbjct: 257 ST--PEG-CSAACKIIMEIMQKEAQDTK-----FTEE----IPLKILAHNNFVGRLIGKE 304
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G + ++ + T T I I Q L + +R + + G A V ++R+++
Sbjct: 305 GRNLKKIEQDTDTKITISPLQDL-TLYNPERTITVKGSIETCAKAEEEVMKKIRESY 360
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 421 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP--PEAQF----KAQGRI 474
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + A + V S G ++GKGG ++E++ +T + +
Sbjct: 475 YGKLKEENF-----FGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 529
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 530 DQ---TPDENDQVVVKITGHF 547
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERLITVT 236
Q +V R+L VGA+IGK G IR + + + I + GA E+ IT+
Sbjct: 194 QSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAA-----EKPITIH 248
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
++ PE S A K ++ + + + T F+ + +++ +N VG L+GK
Sbjct: 249 ST--PEG-CSTACKIIMEIMQKEAQDTK-----FTEE----IPLKILAHNNFVGRLIGKE 296
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G + ++ + T T I I Q L + +R + + G A + ++R+++
Sbjct: 297 GRNLKKIEQDTDTKITISPLQDL-TLYNPERTITVKGSIETCAKAEEEIMKKIRESY 352
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQAR 575
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ QQ ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 243
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 244 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 291
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 292 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 350
Query: 353 H 353
+
Sbjct: 351 Y 351
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 165 RPLSLESDRVATLDARTQQQ-EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
RPL + V T + T ++ E ++L + G++IGKGG I LQ E GA I +
Sbjct: 11 RPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 70
Query: 224 T---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN- 279
+ P ER+ V + +A+ V S + E E + + K +VN
Sbjct: 71 SKDFYPGTTERVCLVQGTA----------EALNAVHSFIAEKVRE--IPQAMTKPEVVNI 118
Query: 280 --------------ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN 325
A+L+V ++ G ++GKGG + + + +G +++ Q + I+
Sbjct: 119 LQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQ 176
Query: 326 DRVVQISGEFSKVKDAVYNVTGRLR-DNHFSGTLNTARTRSTSSVLTET---SPYSRLKD 381
+RVV +SGE +V AV + +++ D S LN + V SPY+ D
Sbjct: 177 ERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPAD 236
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVH---EPRLGSTDRIVVISGTPDETQA 527
VEI VPEN++G++ G+ G L+ ++++GA++ + E G+ +R V I+G+P TQA
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
Query: 528 AQSLL 532
AQ L+
Sbjct: 469 AQYLI 473
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 263 TSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCI 322
T+EK L S K L+ + V N VG +LGKGG + E +++TG I+I
Sbjct: 396 TAEK-LAAESAKELV---EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPG 451
Query: 323 SENDRVVQISGEFSKVKDAVYNVTGRL 349
+ N RV I+G + + A Y ++ R+
Sbjct: 452 TRNRRVT-ITGSPAATQAAQYLISQRV 477
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPR---LGSTDRIVVISGTPDETQA 527
+++++P GS+ G+ G +++L++ +GA + + + + G+T+R+ ++ GT + A
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 528 AQSLL 532
S +
Sbjct: 95 VHSFI 99
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNLAQAR 575
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ Q ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 189 AKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 243
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 244 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 291
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 292 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 350
Query: 353 H 353
+
Sbjct: 351 Y 351
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQAR 575
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ QQ ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 243
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 244 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 291
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 292 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 350
Query: 353 H 353
+
Sbjct: 351 Y 351
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 430 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP--PEAQF----KAQGRI 483
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V S G ++GKGG ++E++ +T + +
Sbjct: 484 YGKLKEENF-----FGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 538
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END VV+I+G F
Sbjct: 539 DQ---TPDENDEVVVKITGHF 556
Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERLITVT 236
Q EV R+L VGA+IGK G IR + + + I + GA E+ IT+
Sbjct: 203 QTEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAA-----EKPITIH 257
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
++ PE S A K ++ + + + T F+ + +++ +N VG L+GK
Sbjct: 258 ST--PEG-CSAACKIIMEIMQKEAQDTK-----FTEE----IPLKILAHNNFVGRLIGKE 305
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G + ++ + T T I I Q L + +R + + G A + ++R+++
Sbjct: 306 GRNLKKIEQDTDTKITISPLQDL-TLYNPERTITVKGSIEPCAKAEEEIMKKIRESY 361
Score = 32.3 bits (72), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/92 (20%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 442 RGWSQGLSHHKGGLELGSGSKSAIVTNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAK 501
RG+ Q +G G+ ++ T + ++VP +G++ G+ G+ + + + + +K
Sbjct: 181 RGFGQRGPARQGSP--GAAARPKPQTEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSK 238
Query: 502 VIVH-EPRLGSTDRIVVISGTPDETQAAQSLL 532
+ +H + G+ ++ + I TP+ AA ++
Sbjct: 239 IDIHRKENAGAAEKPITIHSTPEGCSAACKII 270
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVH---EPRLGSTDRIVVISGTPDETQA 527
VEI VPEN++G++ G+ G L+ ++++GA++ + E G+ +R V I+GTP TQA
Sbjct: 427 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 486
Query: 528 AQSLL 532
AQ L+
Sbjct: 487 AQYLI 491
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 166 PLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM 225
P S + + + D T + +I+ N G +IGKGG ++A+ ++GA++ + +
Sbjct: 155 PSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL-SQK 213
Query: 226 PE---CDERLITVTASEGPESRYSPAQKAVVLVFSRLIE 261
P+ ER++TV+ PE +KAV L+ ++ E
Sbjct: 214 PDGINLQERVVTVSGE--PEQN----RKAVELIIQKIQE 246
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
+++V ++ G ++GKGG + + + +G +++ Q I+ +RVV +SGE + +
Sbjct: 178 KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQNRK 235
Query: 341 AVYNVTGRLRDNHFSGT-LNTARTRSTSSVLTET---SPYSR 378
AV + +++++ SG+ LN + T V SPY+
Sbjct: 236 AVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYAN 277
Score = 36.2 bits (82), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V N VG +LGKGG + E +++TG I+ IS + +R V I+G + + A
Sbjct: 429 IAVPENLVGAILGKGGKTLVEYQELTGARIQ-ISKKGEFVPGTRNRKVTITGTPAATQAA 487
Query: 342 VYNVTGRL 349
Y +T R+
Sbjct: 488 QYLITQRI 495
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGST--DRIVVISGTPDETQAA 528
V+IIVP + G + G+ G+ + + + SGA V + + G +R+V +SG P++ + A
Sbjct: 177 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 236
Query: 529 QSLL 532
L+
Sbjct: 237 VELI 240
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVH---EPRLGSTDRIVVISGTPDETQA 527
VEI VPEN++G++ G+ G L+ ++++GA++ + E G+ +R V I+GTP TQA
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 483
Query: 528 AQSLL 532
AQ L+
Sbjct: 484 AQYLI 488
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 166 PLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM 225
P S + + + D T + +I+ N G +IGKGG ++A+ ++GA++ + +
Sbjct: 152 PSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL-SQK 210
Query: 226 PE---CDERLITVTASEGPESRYSPAQKAVVLVFSRLIE 261
P+ ER++TV+ PE +KAV L+ ++ E
Sbjct: 211 PDGINLQERVVTVSGE--PEQN----RKAVELIIQKIQE 243
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 37/249 (14%)
Query: 165 RPLSLESDRVATLDARTQQQEVSF-RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
RPL + +T T + F ++L + G++IGKGG I LQ E GA I +
Sbjct: 28 RPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 87
Query: 224 T---MPECDERLITVTAS----------------EGPE--SRYSPA---QKAVVLVFSRL 259
+ P ER+ + + E P+ ++ P Q + R+
Sbjct: 88 SKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRI 147
Query: 260 IEG-TSEKGLDFSSNKGLLVNAR-----LVVASNQVGCLLGKGGTIISEMRKVTGTSIRI 313
+ S SS + +R ++V ++ G ++GKGG + + + +G +++
Sbjct: 148 KQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 207
Query: 314 ISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT-LNTARTRSTSSVLTE 372
Q I+ +RVV +SGE + + AV + +++++ SG+ LN + T V
Sbjct: 208 --SQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANS 265
Query: 373 T---SPYSR 378
SPY+
Sbjct: 266 NPTGSPYAN 274
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V N VG +LGKGG + E +++TG I+ IS + +R V I+G + + A
Sbjct: 426 IAVPENLVGAILGKGGKTLVEYQELTGARIQ-ISKKGEFVPGTRNRKVTITGTPAATQAA 484
Query: 342 VYNVTGRL 349
Y +T R+
Sbjct: 485 QYLITQRI 492
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGST--DRIVVISGTPDETQAA 528
V+IIVP + G + G+ G+ + + + SGA V + + G +R+V +SG P++ + A
Sbjct: 174 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 233
Query: 529 QSLL 532
L+
Sbjct: 234 VELI 237
Score = 33.1 bits (74), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPR---LGSTDRIVVISGT 521
+++++P GS+ G+ G +++L++ +GA + + + + G+T+R+ +I GT
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 105
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVH---EPRLGSTDRIVVISGTPDETQA 527
VEI VPEN++G++ G+ G L+ ++++GA++ + E G+ +R V I+GTP TQA
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 528 AQSLL 532
AQ L+
Sbjct: 459 AQYLI 463
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 165 RPLSLESDRVATLDARTQQQEVSF-RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
RPL + +T T + F ++L + G++IGKGG I LQ E GA I +
Sbjct: 27 RPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 86
Query: 224 T---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSS-------- 272
+ P ER+ + + +A+ V + E E + +
Sbjct: 87 SKDFYPGTTERVCLIQGT----------IEALNAVHGFIAEKIREMPQNVAKTEPVSILQ 136
Query: 273 -----NKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDR 327
N + +++V ++ G ++GKGG + + + +G +++ Q I+ +R
Sbjct: 137 PQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQER 194
Query: 328 VVQISGEFSKVKDAVYNVTGRLRDNHFSGT-LNTARTRSTSSV 369
VV +SGE + + AV + +++++ SG+ LN + T V
Sbjct: 195 VVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPV 237
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
V+ P+S+ + R +Q +I+ N G +IGKGG ++A+ ++GA++
Sbjct: 126 VAKTEPVSILQPQTTVNPDRIKQ----VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQ 181
Query: 221 VGATMPE---CDERLITVTASEGPESRYSPAQKAVVLVFSRLIE 261
+ + P+ ER++TV+ PE +KAV L+ ++ E
Sbjct: 182 L-SQKPDGINLQERVVTVSGE--PEQN----RKAVELIIQKIQE 218
Score = 35.8 bits (81), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
+ V N VG +LGKGG + E +++TG I+ IS + +R V I+G + +
Sbjct: 400 EIAVPENLVGAILGKGGKTLVEYQELTGARIQ-ISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 341 AVYNVTGRL 349
A Y +T R+
Sbjct: 459 AQYLITQRI 467
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGST--DRIVVISGTPDETQAA 528
V+IIVP + G + G+ G+ + + + SGA V + + G +R+V +SG P++ + A
Sbjct: 149 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 208
Query: 529 QSLL 532
L+
Sbjct: 209 VELI 212
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPR---LGSTDRIVVISGTPDETQA 527
+++++P GS+ G+ G +++L++ +GA + + + + G+T+R+ +I GT + A
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 110
Query: 528 AQSLL 532
+
Sbjct: 111 VHGFI 115
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 18/142 (12%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII 314
+ ++ E +F S K + + A + V S G ++GKGG ++E++ ++ + +
Sbjct: 471 YGKIKEE------NFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVP 524
Query: 315 SDQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 525 RDQ---TPDENDQVVVKITGHF 543
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERLITVTAS 238
++ R+L VGA+IGK G IR + + + I V GA E+ IT+ ++
Sbjct: 195 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKSITILST 249
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE S A K+++ + + + + F+ L +++ +N VG L+GK G
Sbjct: 250 --PEGT-SAACKSILEIMHK-----EAQDIKFTEEIPL----KILAHNNFVGRLIGKEGR 297
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
+ ++ + T T I I Q L + +R + + G A + ++R+++
Sbjct: 298 NLKKIEQDTDTKITISPLQEL-TLYNPERTITVKGNVETCAKAEEEIMKKIRESY 351
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVH---EPRLGSTDRIVVISGTPDETQA 527
VEI VPEN++G++ G+ G L+ ++++GA++ + E G+ +R V I+GTP TQA
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 528 AQSLL 532
AQ L+
Sbjct: 460 AQYLI 464
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 165 RPLSLESDRVATLDARTQQQEVSF-RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
RPL + +T T + F ++L + G++IGKGG I LQ E GA I +
Sbjct: 28 RPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 87
Query: 224 T---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSS-------- 272
+ P ER+ + + +A+ V + E E + +
Sbjct: 88 SKDFYPGTTERVCLIQGTV----------EALNAVHGFIAEKIREMPQNVAKTEPVSILQ 137
Query: 273 -----NKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDR 327
N + +++V ++ G ++GKGG + + + +G +++ Q I+ +R
Sbjct: 138 PQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQER 195
Query: 328 VVQISGEFSKVKDAVYNVTGRLRDNHFSGT-LNTARTRSTSSVLTET---SPYSR 378
VV +SGE + + AV + +++++ SG+ LN + T V SPY+
Sbjct: 196 VVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYAN 250
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
V+ P+S+ + R +Q +I+ N G +IGKGG ++A+ ++GA++
Sbjct: 127 VAKTEPVSILQPQTTVNPDRIKQ----VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQ 182
Query: 221 VGATMPE---CDERLITVTASEGPESRYSPAQKAVVLVFSRLIE 261
+ + P+ ER++TV+ PE +KAV L+ ++ E
Sbjct: 183 L-SQKPDGINLQERVVTVSGE--PEQN----RKAVELIIQKIQE 219
Score = 35.8 bits (81), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
+ V N VG +LGKGG + E +++TG I+ IS + +R V I+G + +
Sbjct: 401 EIAVPENLVGAILGKGGKTLVEYQELTGARIQ-ISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 341 AVYNVTGRL 349
A Y +T R+
Sbjct: 460 AQYLITQRI 468
Score = 33.5 bits (75), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGST--DRIVVISGTPDETQAA 528
V+IIVP + G + G+ G+ + + + SGA V + + G +R+V +SG P++ + A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 529 QSLL 532
L+
Sbjct: 210 VELI 213
Score = 33.1 bits (74), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 471 VEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPR---LGSTDRIVVISGTPDETQA 527
+++++P GS+ G+ G +++L++ +GA + + + + G+T+R+ +I GT + A
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 528 AQSLL 532
+
Sbjct: 112 VHGFI 116
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A + +R++ ++ PE+++ KA +
Sbjct: 420 VGAIIGKQGQHIKQLSRFAGASIKIAPADGIDAKQRMVIISGP--PEAQF----KAQGRI 473
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
F +L E F + + + A + V S G ++GKGG ++E++ +T + +
Sbjct: 474 FGKLKEENF-----FGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPR 528
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 529 DQ---TPDENDQVVVKITGHF 546
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 176 TLDARTQ-QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLIT 234
+L AR + Q +V R+L VGA+IGK G IR + + + I + R
Sbjct: 184 SLGARPKLQSDVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDI--------HRKEN 235
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
A+E P + +S + ++E ++ +D + + + +++ +N VG L+G
Sbjct: 236 AGAAEKPITVHS-TPEGCSSACRNIMEIMQKEAIDTKITEEIPL--KILAHNNFVGRLIG 292
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
K G + ++ + T T I I Q L + +R + + G A + ++R+++
Sbjct: 293 KEGRNLKKIEQDTDTKITISPLQDL-TLYNPERTITVKGTLDACAKAEEEIMKKVRESY 350
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 18/142 (12%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII 314
+ ++ E +F S K + + A + V S G ++GKGG ++E++ ++ + +
Sbjct: 471 YGKIKEE------NFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVVP 524
Query: 315 SDQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 525 RDQ---TPDENDQVVVKITGHF 543
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERLITVTAS 238
++ R+L VGA+IGK G IR + + + I V GA E+ IT+ ++
Sbjct: 195 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAA-----EKSITILST 249
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE S A K+++ + + + + F+ + +++ +N VG L+GK G
Sbjct: 250 --PEGT-SAACKSILEIMHK-----EAQDIKFTEE----IPLKILAHNNFVGRLIGKEGR 297
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
+ ++ + T T I I Q L + +R + + G A + ++R+++
Sbjct: 298 NLKKIEQDTDTKITISPLQEL-TLYNPERTITVKGSVETCAKAEEEIMKKIRESY 351
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ VT PE+++ KA +
Sbjct: 419 VGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTGP--PEAQF----KAQGRI 472
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + VA+ G ++GKGG ++E++ +T + +
Sbjct: 473 YGKLKEENF-----FGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEVVVPR 527
Query: 316 DQLLKCISENDRV-VQISGEF 335
+Q E+D+V V+I G F
Sbjct: 528 EQ---TPDEHDQVIVKIIGHF 545
Score = 36.2 bits (82), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 18/219 (8%)
Query: 135 LPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSN 194
+PD + ++ SQR P + R S + + + ++ Q ++ R+L
Sbjct: 154 IPDENSEVDSQR------GPDNGRRPGYGPRGTSRQMSPGSGIPSKHQHADIPLRLLVPT 207
Query: 195 DKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVL 254
VGA+IGK G IR + + + I V R A+E P S +S +
Sbjct: 208 QYVGAIIGKEGATIRNITKQTQSKIDV--------HRKENAGAAEKPISIHSTPE-GCSA 258
Query: 255 VFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII 314
++E +++ D + V +++ +N VG L+GK G + ++ + T T I I
Sbjct: 259 ACRMILEIMNQEAKDTKTAD--EVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITIS 316
Query: 315 SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
Q L + +R + + G A + ++R+ +
Sbjct: 317 PLQDL-TLYNPERTITVKGSIEACCLAEQEIMKKVREAY 354
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKV-IVHEPRLGSTDRIVVISGTPDETQAA 528
TV + +P +G++ G+ G ++ +L + +GA + I S R+V+++G P+ A
Sbjct: 409 TVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTGPPEAQFKA 468
Query: 529 Q 529
Q
Sbjct: 469 Q 469
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 18/166 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVL-- 254
VG +IG+GG I +Q ++G + + ER +++T S PE+ QKA ++
Sbjct: 220 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGS--PEA----VQKAKLMLD 273
Query: 255 -VFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRI 313
+ SR G + D+++ + V +++ + + G ++GKGG I ++++ G +
Sbjct: 274 DIVSRGRGGPPGQFHDYANGQNGTVQ-EIMIPAGKAGLVIGKGGETIKQLQERAGVKMIF 332
Query: 314 ISDQLLKCISEN---DRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
I D S+N D+ ++I G+ KV+ A V LR+ G
Sbjct: 333 IQDG-----SQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGG 373
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 467 TNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQ 526
T T E VP+ ++G + G G + +++Q SG KV + G +R V ++G+P+ Q
Sbjct: 207 TTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPEAVQ 266
Query: 527 AAQSLLQAFILTG 539
A+ +L + G
Sbjct: 267 KAKLMLDDIVSRG 279
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 190 ILCSNDKVGAVIGKGGTIIRALQSEAGA---FISVGATMPECDERLITVTASEGPESRYS 246
I+ K G VIGKGG I+ LQ AG FI G+ D+ L + G +
Sbjct: 301 IMIPAGKAGLVIGKGGETIKQLQERAGVKMIFIQDGSQNTNVDKPLRII----GDPYKVQ 356
Query: 247 PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
A + V+ + +G ++ S G ++ + V + VG ++G+ G +I +++
Sbjct: 357 QACEMVMDILRERDQGGFGDRNEYGSRIGGGID--VPVPRHSVGVVIGRSGEMIKKIQND 414
Query: 307 TGTSIRIISD 316
G I+ D
Sbjct: 415 AGVRIQFKQD 424
Score = 32.3 bits (72), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP 226
E++F I K G VIG+GG ++A+ + GAF+ + +P
Sbjct: 488 EMTFSI--PTHKCGLVIGRGGENVKAINQQRGAFVEISRQLP 527
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 140 VDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVAT-LDARTQQQEVSFRILCSNDK-V 197
+D + N+ S Y RPL D V L A Q+ V DK V
Sbjct: 33 IDSIPHLNNSTPLVDPSVYGYGVQKRPLD---DGVGNQLGALVHQRTVITEEFKVPDKMV 89
Query: 198 GAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFS 257
G +IG+GG I +Q+E+G I + + ER +T + PES A++ + +
Sbjct: 90 GFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT--PES-IEQAKRLLGQIVD 146
Query: 258 RLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQ 317
R G D SN + +++ +++VG ++G+GG I ++++ TG + +I D
Sbjct: 147 RCRNGPGFHN-DIDSNSTI---QEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDG 202
Query: 318 LLKCISENDRVVQISGEFSKVKDA 341
L + D+ ++I+G+ KV+ A
Sbjct: 203 PLPTGA--DKPLRITGDAFKVQQA 224
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 447 GLSHHKGGLELGSGSK-SAIVTNTTV---EIIVPENVIGSVYGENGSNLLRLRQISGAKV 502
G K L+ G G++ A+V TV E VP+ ++G + G G + R++ SG K+
Sbjct: 52 GYGVQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKI 111
Query: 503 IVHEPRLGSTDRIVVISGTPDETQAAQSLL 532
+ G +R V++GTP+ + A+ LL
Sbjct: 112 QIASESSGIPERPCVLTGTPESIEQAKRLL 141
Score = 36.2 bits (82), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLG-STDRIVVISGTPDETQAA 528
++E+ VP +G V G NG + +++ +G + I +P G S +R + G PD Q A
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVR-IQFKPDDGISPERAAQVMGPPDRCQHA 313
Query: 529 QSLLQAFILT 538
++ ILT
Sbjct: 314 AHIISELILT 323
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 458 GSGSKSAIVTNTTV-EIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHE--PRLGSTDR 514
G G + I +N+T+ EI++P + +G V G G + +L++ +G K+++ + P D+
Sbjct: 151 GPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADK 210
Query: 515 IVVISGTPDETQAAQSLLQAFI 536
+ I+G + Q A+ ++ I
Sbjct: 211 PLRITGDAFKVQQAREMVLEII 232
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVF 256
VG +IG+GG I +Q E+G I + ER +T + PES Q A L+
Sbjct: 108 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES----VQSAKRLLD 161
Query: 257 SRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISD 316
+ +G G G V ++ AS + G ++GKGG I ++++ G + +I D
Sbjct: 162 QIVEKGRPAPGFHHGDGPGNAVQEIMIPAS-KAGLVIGKGGETIKQLQERAGVKMVMIQD 220
Query: 317 QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
+ D+ ++I+G+ KV+ A V +RD
Sbjct: 221 GPQNTGA--DKPLRITGDPYKVQQAKEMVLELIRD 253
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQ 529
T E VP+ ++G + G G + R++Q SG K+ + G +R +++GTP+ Q+A+
Sbjct: 98 TEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAK 157
Query: 530 SLLQAFILTG 539
LL + G
Sbjct: 158 RLLDQIVEKG 167
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 12/164 (7%)
Query: 190 ILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE--CDERLITVTASEGPESRYSP 247
I+ K G VIGKGG I+ LQ AG + + P+ ++ + +T Y
Sbjct: 186 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDP-----YKV 240
Query: 248 AQ-KAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
Q K +VL R G E ++ S G + + VG ++G+ G +I +++
Sbjct: 241 QQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 300
Query: 307 TGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
G I+ D + DR+ QI+G + + A +T LR
Sbjct: 301 AGVRIQFKPDDG----TTPDRIAQITGPPDRCQHAAEIITDLLR 340
Score = 39.7 bits (91), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 463 SAIVTNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGST-DRIVVISGT 521
S I N +++ +P +G V G NG + +++ +G + I +P G+T DRI I+G
Sbjct: 266 SRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVR-IQFKPDDGTTPDRIAQITGP 324
Query: 522 PDETQAAQSLL 532
PD Q A ++
Sbjct: 325 PDRCQHAAEII 335
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 468 NTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHE--PRLGSTDRIVVISGTPDET 525
N EI++P + G V G+ G + +L++ +G K+++ + P+ D+ + I+G P +
Sbjct: 181 NAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKV 240
Query: 526 QAAQSLLQAFI 536
Q A+ ++ I
Sbjct: 241 QQAKEMVLELI 251
Score = 32.7 bits (73), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 17/130 (13%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVF 256
VG VIG+ G +I+ +Q++AG I +R+ +T GP R A + ++
Sbjct: 283 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQIT---GPPDRCQHAAE-IITDL 338
Query: 257 SRLIEGTSEKGLDFSSNK-------------GLLVNARLVVASNQVGCLLGKGGTIISEM 303
R ++ + G G L +V + + G ++GKGG I +
Sbjct: 339 LRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSI 398
Query: 304 RKVTGTSIRI 313
+ +G I +
Sbjct: 399 SQQSGARIEL 408
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVF 256
VG +IG+GG I +Q E+G I + ER +T + PES Q A L+
Sbjct: 112 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES----VQSAKRLLD 165
Query: 257 SRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISD 316
+ +G G G V ++ AS + G ++GKGG I ++++ G + +I D
Sbjct: 166 QIVEKGRPAPGFHHGDGPGNAVQEIMIPAS-KAGLVIGKGGETIKQLQERAGVKMVMIQD 224
Query: 317 QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
+ D+ ++I+G+ KV+ A V +RD
Sbjct: 225 GPQNTGA--DKPLRITGDPYKVQQAKEMVLELIRD 257
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQ 529
T E VP+ ++G + G G + R++Q SG K+ + G +R +++GTP+ Q+A+
Sbjct: 102 TEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAK 161
Query: 530 SLLQAFILTG 539
LL + G
Sbjct: 162 RLLDQIVEKG 171
Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 12/164 (7%)
Query: 190 ILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE--CDERLITVTASEGPESRYSP 247
I+ K G VIGKGG I+ LQ AG + + P+ ++ + +T Y
Sbjct: 190 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDP-----YKV 244
Query: 248 AQ-KAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
Q K +VL R G E ++ S G + + VG ++G+ G +I +++
Sbjct: 245 QQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 304
Query: 307 TGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
G I+ D + +R+ QI+G + + A +T LR
Sbjct: 305 AGVRIQFKPDDG----TTPERIAQITGPPDRCQHAAEIITDLLR 344
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 463 SAIVTNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGST-DRIVVISGT 521
S I N +++ +P +G V G NG + +++ +G + I +P G+T +RI I+G
Sbjct: 270 SRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVR-IQFKPDDGTTPERIAQITGP 328
Query: 522 PDETQAAQSLL 532
PD Q A ++
Sbjct: 329 PDRCQHAAEII 339
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 468 NTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHE--PRLGSTDRIVVISGTPDET 525
N EI++P + G V G+ G + +L++ +G K+++ + P+ D+ + I+G P +
Sbjct: 185 NAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKV 244
Query: 526 QAAQSLLQAFI 536
Q A+ ++ I
Sbjct: 245 QQAKEMVLELI 255
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 17/130 (13%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVF 256
VG VIG+ G +I+ +Q++AG I ER+ +T GP R A + ++
Sbjct: 287 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQIT---GPPDRCQHAAE-IITDL 342
Query: 257 SRLIEGTSEKGLDFSSNK-------------GLLVNARLVVASNQVGCLLGKGGTIISEM 303
R ++ + G G L +V + + G ++GKGG I +
Sbjct: 343 LRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSI 402
Query: 304 RKVTGTSIRI 313
+ +G I +
Sbjct: 403 SQQSGARIEL 412
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVF 256
VG +IG+GG I +Q E+G I + ER +T + PES Q A L+
Sbjct: 107 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGT--PES----VQSAKRLLD 160
Query: 257 SRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISD 316
+ +G G G V ++ AS + G ++GKGG I ++++ G + +I D
Sbjct: 161 QIVEKGRPAPGFHHGDGPGNAVQEIMIPAS-KAGLVIGKGGETIKQLQERAGVKMVMIQD 219
Query: 317 QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
+ D+ ++I+G+ KV+ A V +RD
Sbjct: 220 GPQNTGA--DKPLRITGDPYKVQQAKEMVLELIRD 252
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 470 TVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQAAQ 529
T E VP+ ++G + G G + R++Q SG K+ + G +R +++GTP+ Q+A+
Sbjct: 97 TEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAK 156
Query: 530 SLLQAFILTG 539
LL + G
Sbjct: 157 RLLDQIVEKG 166
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 12/164 (7%)
Query: 190 ILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE--CDERLITVTASEGPESRYSP 247
I+ K G VIGKGG I+ LQ AG + + P+ ++ + +T Y
Sbjct: 185 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDP-----YKV 239
Query: 248 AQ-KAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
Q K +VL R G E ++ S G + + VG ++G+ G +I +++
Sbjct: 240 QQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND 299
Query: 307 TGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
G I+ D + DR+ QI+G + + A +T LR
Sbjct: 300 AGVRIQFKPDDG----TTPDRIAQITGPPDRCQHAAEIITDLLR 339
Score = 39.3 bits (90), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 448 LSHHKGGL-ELGSGSKSAIVTNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHE 506
L +GG E+ + S I N +++ +P +G V G NG + +++ +G + I +
Sbjct: 249 LIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVR-IQFK 307
Query: 507 PRLGST-DRIVVISGTPDETQAAQSLL 532
P G+T DRI I+G PD Q A ++
Sbjct: 308 PDDGTTPDRIAQITGPPDRCQHAAEII 334
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 468 NTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHE--PRLGSTDRIVVISGTPDET 525
N EI++P + G V G+ G + +L++ +G K+++ + P+ D+ + I+G P +
Sbjct: 180 NAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKV 239
Query: 526 QAAQSLLQAFI 536
Q A+ ++ I
Sbjct: 240 QQAKEMVLELI 250
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 416 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGP--PEAQF----KAQGRI 469
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 470 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 524
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSG 356
DQ EN++V V+I G F + A + ++ +++ H G
Sbjct: 525 DQ---TPDENEQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKG 566
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 158/391 (40%), Gaps = 62/391 (15%)
Query: 176 TLDARTQQQ--EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPE 227
T A +QQ ++ R+L VGA+IGK G IR + + + I V GA
Sbjct: 184 TAGAPVKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA--- 240
Query: 228 CDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASN 287
E+ I++ ++ PE S A K ++ + + E K D V +++ +N
Sbjct: 241 --EKAISIHST--PEG-CSAACKMILEIMQK--EAKDTKTAD-------EVPLKILAHNN 286
Query: 288 QVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTG 347
VG L+GK G + ++ + T T I I S Q L + +R + + G A +
Sbjct: 287 FVGRLIGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGSIENCCKAEQEIMK 345
Query: 348 RLRD------------NHFSGTLNTART----RSTSSV------LTETSPYSRLKDPASF 385
++R+ +H LN A S+++V ++ +PYS P
Sbjct: 346 KVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAPYSSFMPPEQE 405
Query: 386 GVHSSV---AVSHDFSQPPLTQGMDHLGLSHSLDCPSSPKLWTAQTVTGVHLRGSSDVGR 442
VH + AV + Q + L S +P V V + G + +
Sbjct: 406 TVHVFIPAQAVGAIIGKK--GQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPE-AQ 462
Query: 443 GWSQGLSHHKGGLELGSGSKSAIVTNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKV 502
+QG + K E G K + T I VP + G V G+ G + L+ ++ A+V
Sbjct: 463 FKAQGRIYGKLKEENFFGPKEEVKLET--HIRVPASAAGRVIGKGGKTVNELQNLTAAEV 520
Query: 503 IVHEPRLGSTDR----IVVISGTPDETQAAQ 529
+V PR + D IV I G +Q AQ
Sbjct: 521 VV--PRDQTPDENEQVIVKIIGHFYASQMAQ 549
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVF 256
VG +IG+GG I +Q ++G + + ER +++T + PES QKA +++
Sbjct: 157 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGA--PES----VQKAKMMLD 210
Query: 257 SRLIEGTSEKGLDFSSNKGLLVNA---RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRI 313
+ G F N N +++ + + G ++GKGG I ++++ G + +
Sbjct: 211 DIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIL 270
Query: 314 ISDQLLKCISEN---DRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
I D S+N D+ ++I G+ KV+ A V LR+ G
Sbjct: 271 IQDG-----SQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGG 311
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 467 TNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQ 526
T+ T E VP+ ++G + G G + +++Q SG KV + G +R V ++G P+ Q
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 203
Query: 527 AAQSLLQAFILTG 539
A+ +L + G
Sbjct: 204 KAKMMLDDIVSRG 216
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 190 ILCSNDKVGAVIGKGGTIIRALQSEAGA---FISVGATMPECDERLITVTASEGPESRYS 246
I+ K G VIGKGG I+ LQ AG I G+ D+ L + G +
Sbjct: 239 IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRII----GDPYKVQ 294
Query: 247 PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
A + V+ + +G ++ S G ++ + V + VG ++G+ G +I +++
Sbjct: 295 QACEMVMDILRERDQGGFGDRNEYGSRVGGGID--VPVPRHSVGVVIGRSGEMIKKIQND 352
Query: 307 TGTSIRIISD 316
G I+ D
Sbjct: 353 AGVRIQFKQD 362
Score = 33.1 bits (74), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP 226
E++F I K G VIG+GG ++A+ + GAF+ + +P
Sbjct: 427 EMTFSIPTH--KCGLVIGRGGENVKAINQQTGAFVEISRQLP 466
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVF 256
VG +IG+GG I +Q ++G + + ER +++T + PES QKA +++
Sbjct: 156 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGA--PES----VQKAKMMLD 209
Query: 257 SRLIEGTSEKGLDFSSNKGLLVNA---RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRI 313
+ G F N N +++ + + G ++GKGG I ++++ G + +
Sbjct: 210 DIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIL 269
Query: 314 ISDQLLKCISEN---DRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
I D S+N D+ ++I G+ KV+ A V LR+ G
Sbjct: 270 IQDG-----SQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGG 310
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 467 TNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQ 526
T+ T E VP+ ++G + G G + +++Q SG KV + G +R V ++G P+ Q
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 202
Query: 527 AAQSLLQAFILTG 539
A+ +L + G
Sbjct: 203 KAKMMLDDIVSRG 215
Score = 36.2 bits (82), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 190 ILCSNDKVGAVIGKGGTIIRALQSEAGA---FISVGATMPECDERLITVTASEGPESRYS 246
I+ K G VIGKGG I+ LQ AG I G+ D+ L + G +
Sbjct: 238 IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRII----GDPYKVQ 293
Query: 247 PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
A + V+ + +G ++ S G ++ + V + VG ++G+ G +I +++
Sbjct: 294 QACEMVMDILRERDQGGFGDRNEYGSRIGGGID--VPVPRHSVGVVIGRSGEMIKKIQND 351
Query: 307 TGTSIRIISD 316
G I+ D
Sbjct: 352 AGVRIQFKQD 361
Score = 33.1 bits (74), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP 226
E++F I K G VIG+GG ++A+ + GAF+ + +P
Sbjct: 426 EMTFSIPTH--KCGLVIGRGGENVKAINQQTGAFVEISRQLP 465
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVF 256
VG +IG+GG I +Q ++G + + ER +++T + PES QKA +++
Sbjct: 157 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGA--PES----VQKAKMMLD 210
Query: 257 SRLIEGTSEKGLDFSSNKGLLVNA---RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRI 313
+ G F N N +++ + + G ++GKGG I ++++ G + +
Sbjct: 211 DIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIL 270
Query: 314 ISDQLLKCISEN---DRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
I D S+N D+ ++I G+ KV+ A V LR+ G
Sbjct: 271 IQDG-----SQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGG 311
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 467 TNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVISGTPDETQ 526
T+ T E VP+ ++G + G G + +++Q SG KV + G +R V ++G P+ Q
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 203
Query: 527 AAQSLLQAFILTG 539
A+ +L + G
Sbjct: 204 KAKMMLDDIVSRG 216
Score = 35.8 bits (81), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 190 ILCSNDKVGAVIGKGGTIIRALQSEAGA---FISVGATMPECDERLITVTASEGPESRYS 246
I+ K G VIGKGG I+ LQ AG I G+ D+ L + G +
Sbjct: 239 IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRII----GDPYKVQ 294
Query: 247 PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
A + V+ + +G ++ S G ++ + V + VG ++G+ G +I +++
Sbjct: 295 QACEMVMDILRERDQGGFGDRNEYGSRVGGGID--VPVPRHSVGVVIGRSGEMIKKIQND 352
Query: 307 TGTSIRIISD 316
G I+ D
Sbjct: 353 AGVRIQFKQD 362
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP 226
E++F I K G VIG+GG ++A+ + GAF+ + +P
Sbjct: 427 EMTFSI--PTHKCGLVIGRGGENVKAINQQTGAFVEISRQLP 466
>sp|A0K927|PNP_BURCH Polyribonucleotide nucleotidyltransferase OS=Burkholderia
cenocepacia (strain HI2424) GN=pnp PE=3 SV=1
Length = 715
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 179 ARTQQQEVSFRIL---CSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV 235
A TQ E + R++ + +K+ VIGKGG++IRAL E G I + D+ ++T+
Sbjct: 551 ANTQLSEFAPRMITVKINPEKIRDVIGKGGSVIRALTEETGTTIDI------SDDGVVTI 604
Query: 236 --TASEG-PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL 277
T+SEG E++ Q + ++ EGT K LDF + LL
Sbjct: 605 ASTSSEGMAEAKKRIEQITAEIEVGQVYEGTVLKLLDFGAIVNLL 649
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189,465,508
Number of Sequences: 539616
Number of extensions: 7851490
Number of successful extensions: 19515
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 18496
Number of HSP's gapped (non-prelim): 1082
length of query: 541
length of database: 191,569,459
effective HSP length: 122
effective length of query: 419
effective length of database: 125,736,307
effective search space: 52683512633
effective search space used: 52683512633
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)