BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009176
(541 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5AXV1|MCH1_EMENI Probable transporter mch1 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mch1 PE=3
SV=2
Length = 615
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 434 YTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHK- 492
+ +TA++G+ G+I S+ + ++G +NF N IV G+ ++G + + Y
Sbjct: 507 HLTTALVGLGYGSIFSLVPIIISVVWGVENFGTNWGIVAMFPAAGAAMWGVIYSRAYQSA 566
Query: 493 -EGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530
+G +G+C G C F W C F ++A++ +
Sbjct: 567 ADGSPTDDGQCHGWKC----FGFWSIGCTFSVWVAIVAW 601
>sp|Q9P3K8|MCH1_NEUCR Probable transporter MCH1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mch-1
PE=3 SV=1
Length = 598
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 433 LYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYH- 491
+ ++ ++G GA+ S++ T ++G +NF+ N IV +G+ +G + + VY
Sbjct: 480 FWVASGLVGAGYGAVFSLTPIIITVIWGVENFATNWGIVAMFPALGATFWGLVYSAVYQS 539
Query: 492 ---KEGHNAHNGK----CMGMACYRSTFILWGSFCLFGTFLALILYA-RTRKFYSQR 540
K N G+ C G CY S F W L+L+A + + ++QR
Sbjct: 540 GVEKAASNGQGGEEDQFCYGSECYASAF--WAMAASVWVACGLVLWAWKGKNGWAQR 594
>sp|Q4WVT3|MCH1_ASPFU Probable transporter mch1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=mch1 PE=3
SV=1
Length = 619
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 434 YTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKE 493
+ +TA+IG+ G+ S+ + ++G +NF N IV G+ ++G + + Y
Sbjct: 510 HVTTALIGLGYGSAFSLVPIIISVVWGVENFGTNWGIVAMVPAAGAAMWGVIYSRGYQDA 569
Query: 494 ---GHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRKFYSQR 540
G+ + +G+C G CY W C ++A++ + + + +R
Sbjct: 570 TDGGNGSPDGQCHGWRCYG----FWAVGCTLSVWVAVVAWILAWRGWRRR 615
>sp|Q4IM48|MCH1_GIBZE Probable transporter MCH1 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=MCH1 PE=3 SV=1
Length = 572
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 124/323 (38%), Gaps = 58/323 (17%)
Query: 268 IRCFVEDKRLINRVKRVHNSTSIEEVS--SRLENGV-ATKEEVDHQ-LRDDDSDGIYHGL 323
+R ED+ + ++ + S ++ S R E AT EE + L D D
Sbjct: 254 LRVVDEDELIDEAIEELEQSGLLDGSSLLGRTERSYGATGEETESSALLDPSKDN----- 308
Query: 324 GAKEEIGAMLMLQRVDF------WLYFFVYFSGATLGLVFLNNLGQI------AESRGCS 371
AK + +L + F W + + G F+NNLG I E G S
Sbjct: 309 -AKWKKNWVLNAETRSFLADRTMWPFALAFLLIVGPGEAFINNLGTIIGTLTPPEMEGWS 367
Query: 372 GTSSLVSLSSSFG--------FFGRLIPSLFGYFFSR------SKHMIPSPASIG----- 412
+S + S FG F G L L Y ++ ++ + S SI
Sbjct: 368 HRTSAATHVSIFGITNTASRIFIGTLTDLLAPYPHTQHVQGPSTRSAVSSRFSISRVAFM 427
Query: 413 ALMAPMAGAFMLLLNETNVA-----LYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVN 467
A A M +L+L V + + ++G GAI S++ T ++G +NF+ N
Sbjct: 428 AFFASMLSIGLLILASGLVQNHAERFWLVSGLVGAGYGAIFSLTPLMVTIIWGVENFATN 487
Query: 468 HNIVVANIPIGSFLFGYLAALVYHK---------EGHNAHNGKCMGMACYRSTFILWGSF 518
+ ++ GS +G + + Y EG + + C G CY T+ W
Sbjct: 488 YGLIGMLPAAGSTFWGLVYSATYQNGANKSKAGPEGSDRDDLFCYGEQCYAPTY--WAET 545
Query: 519 CLFGTFLALILYA-RTRKFYSQR 540
+ L+L+A + R +SQR
Sbjct: 546 ITVWIAVGLLLWAWKGRGGWSQR 568
>sp|Q6P4A7|SFXN4_HUMAN Sideroflexin-4 OS=Homo sapiens GN=SFXN4 PE=1 SV=1
Length = 337
Score = 35.8 bits (81), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 354 GLVFLNNLGQIAESRGCSGTSSL-VSLSSSFGFFGR--LIPSLFGYFFSRSKHMIPSPAS 410
G+ ++ G + +GT ++ +L+S FG LIP +F YFF R+++ +P S
Sbjct: 224 GIAVMDKEGNVLGHSRIAGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGS 283
Query: 411 IGALMAPMAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELF 459
+ L M L+ + +++ I CS S T TE+F
Sbjct: 284 LWILKLSCTVLAMGLMVPFSFSIFPQIGQIQYCSLEEKIQSPTEETEIF 332
>sp|Q2NHG2|DP2L_METST DNA polymerase II large subunit OS=Methanosphaera stadtmanae
(strain DSM 3091) GN=polC PE=3 SV=1
Length = 1117
Score = 35.8 bits (81), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 259 PLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRD 313
PL L E++ V + + R+K + S S EEV+ ++ +ATK++V+ Q D
Sbjct: 35 PLAKDLAERVEGLVGPEGVAKRIKELEKSMSREEVAFQIAKEIATKDDVEGQPND 89
>sp|Q6CGU8|MCH1_YARLI Probable transporter MCH1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=MCH1 PE=3 SV=1
Length = 486
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 96/240 (40%), Gaps = 37/240 (15%)
Query: 303 TKEEVDHQLR-------DDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYFFVY-FSGATLG 354
T E + +LR D + DG H +E WL+ + F G
Sbjct: 235 TAESMASELRKKAEASTDCNCDGPGHEGATLKE-----FFTDKTAWLFLLCFVFIGGPFE 289
Query: 355 LVFLNNLGQI-----AESRGCSGTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSP- 408
+ F NN+G I E+ S+ VSL ++F RL+ G+ + + P
Sbjct: 290 M-FQNNMGAILDTVTVENADSPSFSTHVSLFATFSTVSRLV---VGFSSEAMESHVSRPV 345
Query: 409 --------ASIGALMAPMAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFG 460
A+ LM P +G F + N ++ T + G G+ ++ T T+++G
Sbjct: 346 LLSVIALVAACIHLMVP-SGIFTVFDNAKYFSVVT--IVNGFSYGSSFTLVPTIVTKVWG 402
Query: 461 TKNFSVNHNIVVANIPIGSFLFGYLAALVYH---KEGHNAHNGKCMGMACYRSTFILWGS 517
N + + +GS +G L A VY + G + + C G+ CY TF++ G+
Sbjct: 403 IANLGTIWGSFILALAVGSLGYGLLFAKVYDAASEVGVGSMSQVCSGVHCYGLTFVITGT 462
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,852,489
Number of Sequences: 539616
Number of extensions: 7646704
Number of successful extensions: 27668
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 27644
Number of HSP's gapped (non-prelim): 49
length of query: 541
length of database: 191,569,459
effective HSP length: 122
effective length of query: 419
effective length of database: 125,736,307
effective search space: 52683512633
effective search space used: 52683512633
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)