Query 009176
Match_columns 541
No_of_seqs 213 out of 598
Neff 6.5
Searched_HMMs 46136
Date Thu Mar 28 21:20:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009176.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009176hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 2.5E-83 5.4E-88 708.7 25.4 508 6-540 23-562 (591)
2 PF06813 Nodulin-like: Nodulin 100.0 3.1E-66 6.6E-71 517.9 16.6 249 9-264 1-250 (250)
3 TIGR00890 2A0111 Oxalate/Forma 99.9 2.3E-23 5E-28 213.7 16.6 370 8-524 1-376 (377)
4 KOG2504 Monocarboxylate transp 99.9 2.4E-23 5.3E-28 228.5 16.9 426 9-530 44-476 (509)
5 TIGR00892 2A0113 monocarboxyla 99.8 5.6E-20 1.2E-24 199.0 19.3 406 8-536 16-431 (455)
6 PRK11551 putative 3-hydroxyphe 99.8 1.2E-18 2.7E-23 183.6 18.6 386 3-532 7-398 (406)
7 TIGR00893 2A0114 d-galactonate 99.8 1.7E-18 3.8E-23 177.6 18.0 381 25-529 9-398 (399)
8 PRK11663 regulatory protein Uh 99.8 9.7E-18 2.1E-22 180.0 20.9 383 23-529 36-423 (434)
9 PRK03699 putative transporter; 99.8 8.6E-17 1.9E-21 170.1 23.9 376 7-535 3-385 (394)
10 PRK09705 cynX putative cyanate 99.8 8E-17 1.7E-21 170.7 23.6 380 1-534 1-385 (393)
11 PLN00028 nitrate transmembrane 99.8 1.5E-17 3.3E-22 181.2 17.7 389 9-530 35-433 (476)
12 PRK09556 uhpT sugar phosphate 99.7 5.8E-17 1.3E-21 175.6 20.0 399 24-530 43-449 (467)
13 PRK11273 glpT sn-glycerol-3-ph 99.7 1.6E-16 3.4E-21 171.6 19.1 404 7-533 25-438 (452)
14 PRK05122 major facilitator sup 99.7 8.4E-16 1.8E-20 161.9 22.7 376 7-535 14-394 (399)
15 PRK03545 putative arabinose tr 99.7 1.7E-15 3.6E-20 159.7 21.8 369 6-530 4-380 (390)
16 TIGR00881 2A0104 phosphoglycer 99.7 8.4E-16 1.8E-20 157.8 18.1 355 25-494 10-374 (379)
17 TIGR00879 SP MFS transporter, 99.7 5.8E-16 1.3E-20 163.6 15.5 399 29-534 47-474 (481)
18 TIGR00895 2A0115 benzoate tran 99.7 5.1E-16 1.1E-20 160.8 14.4 379 6-489 12-397 (398)
19 TIGR00891 2A0112 putative sial 99.6 3.1E-15 6.8E-20 155.8 17.4 383 6-515 7-401 (405)
20 TIGR02332 HpaX 4-hydroxyphenyl 99.6 2.6E-15 5.6E-20 160.4 15.1 378 25-519 23-410 (412)
21 PRK12307 putative sialic acid 99.6 5.8E-15 1.3E-19 156.7 17.5 360 8-494 15-385 (426)
22 TIGR00712 glpT glycerol-3-phos 99.6 6.7E-15 1.4E-19 158.1 18.0 404 8-535 24-438 (438)
23 TIGR00896 CynX cyanate transpo 99.6 1.6E-14 3.5E-19 150.0 18.6 331 27-495 17-351 (355)
24 PRK12382 putative transporter; 99.6 5E-14 1.1E-18 148.2 20.9 349 29-529 35-388 (392)
25 PRK09528 lacY galactoside perm 99.6 4.1E-14 9E-19 150.7 19.8 390 2-532 5-405 (420)
26 TIGR00898 2A0119 cation transp 99.6 8.2E-15 1.8E-19 159.5 13.8 384 24-529 103-494 (505)
27 TIGR00897 2A0118 polyol permea 99.6 1.4E-13 3E-18 146.2 22.5 379 6-529 12-400 (402)
28 cd06174 MFS The Major Facilita 99.6 6.9E-14 1.5E-18 141.6 18.1 330 25-528 14-350 (352)
29 TIGR00894 2A0114euk Na(+)-depe 99.6 3.6E-14 7.7E-19 153.2 15.3 376 39-538 70-458 (465)
30 PRK09874 drug efflux system pr 99.5 4.2E-13 9.2E-18 141.0 20.7 139 376-534 263-402 (408)
31 TIGR01299 synapt_SV2 synaptic 99.5 6.9E-14 1.5E-18 160.0 15.2 151 6-163 162-315 (742)
32 TIGR00900 2A0121 H+ Antiporter 99.5 8.2E-14 1.8E-18 142.6 13.7 333 35-493 24-364 (365)
33 TIGR00710 efflux_Bcr_CflA drug 99.5 5.7E-13 1.2E-17 138.3 20.1 147 7-161 3-151 (385)
34 PRK10091 MFS transport protein 99.5 7E-13 1.5E-17 139.7 20.7 346 27-529 20-375 (382)
35 PRK11646 multidrug resistance 99.5 3.9E-13 8.4E-18 143.2 18.7 382 5-538 8-395 (400)
36 TIGR00903 2A0129 major facilit 99.5 4.5E-13 9.8E-18 141.7 18.7 352 27-527 8-362 (368)
37 PRK03893 putative sialic acid 99.5 1.4E-12 3.1E-17 141.3 21.4 412 7-523 16-446 (496)
38 TIGR00885 fucP L-fucose:H+ sym 99.5 1.2E-12 2.5E-17 140.4 20.3 371 30-518 23-400 (410)
39 PRK03633 putative MFS family t 99.5 1.1E-12 2.3E-17 138.1 19.6 337 29-524 25-366 (381)
40 TIGR00889 2A0110 nucleoside tr 99.5 1.1E-12 2.4E-17 140.8 19.3 191 331-535 201-407 (418)
41 PRK10054 putative transporter; 99.5 2.2E-12 4.8E-17 137.1 20.7 379 4-535 4-388 (395)
42 PRK15402 multidrug efflux syst 99.5 2.9E-12 6.3E-17 135.7 21.1 353 7-495 9-373 (406)
43 PRK10213 nepI ribonucleoside t 99.5 4.7E-12 1E-16 134.6 21.7 363 6-523 15-384 (394)
44 PRK10504 putative transporter; 99.5 6.3E-12 1.4E-16 135.7 22.6 432 6-525 6-449 (471)
45 PRK10489 enterobactin exporter 99.5 1.2E-12 2.5E-17 139.3 16.1 363 28-535 35-404 (417)
46 TIGR00711 efflux_EmrB drug res 99.4 2.3E-12 4.9E-17 138.8 17.8 416 28-528 20-484 (485)
47 PF07690 MFS_1: Major Facilita 99.4 1.1E-13 2.4E-18 141.2 6.6 326 29-483 15-352 (352)
48 TIGR00886 2A0108 nitrite extru 99.4 3.2E-12 6.9E-17 132.2 16.9 125 23-154 14-141 (366)
49 PRK15034 nitrate/nitrite trans 99.4 4.7E-12 1E-16 137.8 17.0 377 25-534 49-458 (462)
50 TIGR00899 2A0120 sugar efflux 99.4 1.9E-11 4.1E-16 126.7 20.0 175 334-529 195-373 (375)
51 PRK10133 L-fucose transporter; 99.4 3.3E-11 7.2E-16 130.3 21.9 377 27-523 43-426 (438)
52 TIGR00887 2A0109 phosphate:H+ 99.4 1E-11 2.3E-16 135.9 17.8 120 34-154 40-166 (502)
53 TIGR00883 2A0106 metabolite-pr 99.4 1.8E-11 3.8E-16 126.4 17.9 364 26-521 9-392 (394)
54 TIGR00902 2A0127 phenyl propri 99.4 1E-10 2.3E-15 123.3 23.7 173 330-524 197-373 (382)
55 TIGR00882 2A0105 oligosacchari 99.3 6.9E-11 1.5E-15 124.9 20.3 179 330-529 207-394 (396)
56 PRK14995 methyl viologen resis 99.3 9.7E-11 2.1E-15 128.3 21.9 378 29-492 25-413 (495)
57 PRK08633 2-acyl-glycerophospho 99.3 7.4E-11 1.6E-15 140.8 22.1 369 30-527 30-407 (1146)
58 PRK09952 shikimate transporter 99.3 7.6E-11 1.7E-15 127.1 19.0 181 333-531 244-434 (438)
59 PRK10473 multidrug efflux syst 99.3 1.6E-10 3.4E-15 121.7 20.7 121 25-152 18-140 (392)
60 PRK11043 putative transporter; 99.3 1.4E-10 2.9E-15 122.6 19.4 138 9-153 5-144 (401)
61 PRK11652 emrD multidrug resist 99.3 1.3E-10 2.7E-15 122.5 19.1 111 26-143 24-136 (394)
62 PRK10406 alpha-ketoglutarate t 99.3 3E-10 6.5E-15 121.9 21.8 185 330-534 234-428 (432)
63 PRK10077 xylE D-xylose transpo 99.3 1.7E-10 3.7E-15 124.4 19.9 130 25-154 24-171 (479)
64 PRK15075 citrate-proton sympor 99.3 6.3E-10 1.4E-14 119.5 23.0 147 2-151 6-165 (434)
65 PRK10642 proline/glycine betai 99.3 2.5E-10 5.4E-15 124.8 20.1 159 360-537 272-437 (490)
66 PRK11128 putative 3-phenylprop 99.3 3E-10 6.5E-15 119.7 19.6 172 330-523 197-372 (382)
67 PRK11102 bicyclomycin/multidru 99.2 2.2E-10 4.8E-15 119.3 16.4 125 27-158 8-134 (377)
68 PRK06814 acylglycerophosphoeth 99.2 4.6E-10 9.9E-15 134.6 19.1 378 8-528 11-420 (1140)
69 COG2223 NarK Nitrate/nitrite t 99.1 1.4E-09 3E-14 115.3 17.3 357 27-534 31-405 (417)
70 PRK15011 sugar efflux transpor 99.1 8.5E-09 1.8E-13 109.2 21.5 149 360-529 238-390 (393)
71 PRK11010 ampG muropeptide tran 99.1 2.2E-09 4.7E-14 117.9 17.5 179 331-530 215-403 (491)
72 PRK11902 ampG muropeptide tran 99.1 6.5E-09 1.4E-13 110.3 18.4 184 330-538 201-397 (402)
73 COG0738 FucP Fucose permease [ 99.0 2.6E-08 5.6E-13 105.4 22.0 364 30-523 33-402 (422)
74 TIGR00792 gph sugar (Glycoside 99.0 1.7E-08 3.7E-13 107.4 20.1 157 330-494 214-382 (437)
75 COG2271 UhpC Sugar phosphate p 98.9 1.3E-08 2.7E-13 108.3 14.7 377 28-540 47-444 (448)
76 KOG2532 Permease of the major 98.9 1.4E-08 3.1E-13 111.0 14.0 365 37-529 65-446 (466)
77 PRK15403 multidrug efflux syst 98.9 2.5E-07 5.4E-12 99.1 22.3 125 24-155 30-156 (413)
78 PRK09584 tppB putative tripept 98.8 1E-06 2.2E-11 97.2 23.6 129 405-536 347-485 (500)
79 TIGR02718 sider_RhtX_FptX side 98.8 2.8E-07 6.1E-12 97.2 18.2 175 331-525 201-386 (390)
80 TIGR00901 2A0125 AmpG-related 98.8 7.2E-08 1.6E-12 100.1 12.6 122 33-159 11-139 (356)
81 PRK11195 lysophospholipid tran 98.7 3.4E-07 7.4E-12 97.4 16.5 129 11-151 6-136 (393)
82 PRK10213 nepI ribonucleoside t 98.7 1E-07 2.3E-12 101.3 11.7 165 339-523 18-188 (394)
83 TIGR00924 yjdL_sub1_fam amino 98.7 1.1E-05 2.4E-10 88.5 27.7 125 32-163 33-165 (475)
84 PRK10504 putative transporter; 98.6 1.4E-07 3E-12 102.0 10.8 175 338-532 10-187 (471)
85 PRK09848 glucuronide transport 98.6 1.2E-06 2.5E-11 94.6 17.7 158 331-494 221-390 (448)
86 TIGR00710 efflux_Bcr_CflA drug 98.6 3E-07 6.4E-12 95.5 12.5 172 338-529 4-179 (385)
87 PF00083 Sugar_tr: Sugar (and 98.6 3.8E-10 8.2E-15 120.9 -10.3 379 43-534 44-440 (451)
88 COG2814 AraJ Arabinose efflux 98.6 2.1E-05 4.5E-10 84.1 25.6 357 25-535 28-391 (394)
89 PRK10091 MFS transport protein 98.5 4.2E-07 9E-12 95.9 11.4 170 338-527 3-175 (382)
90 PRK10207 dipeptide/tripeptide 98.5 2.8E-05 6.1E-10 85.7 24.9 150 2-158 6-162 (489)
91 PRK11663 regulatory protein Uh 98.5 7.4E-07 1.6E-11 95.9 12.1 169 338-527 23-195 (434)
92 TIGR00924 yjdL_sub1_fam amino 98.5 8.6E-07 1.9E-11 97.1 12.2 168 339-525 11-187 (475)
93 PRK03699 putative transporter; 98.5 9.3E-07 2E-11 93.6 12.0 171 338-527 7-180 (394)
94 TIGR01299 synapt_SV2 synaptic 98.5 5.3E-07 1.2E-11 103.9 10.5 191 331-528 156-353 (742)
95 PF03825 Nuc_H_symport: Nucleo 98.5 1.3E-05 2.7E-10 86.4 20.5 159 330-495 199-367 (400)
96 TIGR00900 2A0121 H+ Antiporter 98.5 5.1E-07 1.1E-11 92.4 9.0 170 340-529 1-178 (365)
97 KOG2563 Permease of the major 98.4 4.2E-06 9.2E-11 89.9 15.6 370 6-494 40-423 (480)
98 PRK15403 multidrug efflux syst 98.4 1.5E-06 3.3E-11 93.1 12.2 156 353-528 31-189 (413)
99 PRK10054 putative transporter; 98.4 1.2E-06 2.6E-11 93.2 10.9 174 338-532 7-184 (395)
100 TIGR00712 glpT glycerol-3-phos 98.4 2.4E-06 5.3E-11 91.9 13.3 179 331-530 21-206 (438)
101 PRK03545 putative arabinose tr 98.4 1.8E-06 4E-11 91.0 12.1 149 361-529 32-183 (390)
102 PF07690 MFS_1: Major Facilita 98.4 4.2E-07 9.1E-12 92.7 6.9 147 363-529 22-171 (352)
103 cd06174 MFS The Major Facilita 98.4 2.1E-06 4.6E-11 86.8 12.0 170 341-530 2-174 (352)
104 PRK11102 bicyclomycin/multidru 98.4 1.5E-06 3.3E-11 90.4 11.2 153 357-529 10-165 (377)
105 PF13347 MFS_2: MFS/sugar tran 98.4 1E-05 2.3E-10 86.8 17.8 156 331-494 218-386 (428)
106 PRK09669 putative symporter Ya 98.4 1.5E-05 3.2E-10 86.0 18.4 158 330-495 221-391 (444)
107 PRK15402 multidrug efflux syst 98.4 3.3E-06 7.2E-11 89.5 12.5 172 337-528 8-186 (406)
108 TIGR00880 2_A_01_02 Multidrug 98.4 1.8E-06 3.9E-11 75.4 8.8 133 377-529 4-137 (141)
109 TIGR02332 HpaX 4-hydroxyphenyl 98.3 2.5E-06 5.4E-11 91.4 11.2 152 364-529 34-188 (412)
110 PRK11652 emrD multidrug resist 98.3 4.5E-06 9.9E-11 87.9 12.5 169 340-528 10-181 (394)
111 KOG2533 Permease of the major 98.3 2E-05 4.3E-10 87.1 17.8 339 36-492 72-426 (495)
112 TIGR01272 gluP glucose/galacto 98.3 1.3E-05 2.7E-10 83.1 14.4 163 333-517 135-302 (310)
113 TIGR00892 2A0113 monocarboxyla 98.3 4.3E-06 9.4E-11 90.8 11.4 149 360-529 41-193 (455)
114 TIGR00893 2A0114 d-galactonate 98.3 1.5E-06 3.2E-11 89.2 7.2 148 362-529 18-168 (399)
115 TIGR00891 2A0112 putative sial 98.3 7.4E-06 1.6E-10 85.3 12.1 146 360-523 34-182 (405)
116 TIGR00895 2A0115 benzoate tran 98.3 2.7E-06 5.9E-11 88.0 8.7 150 360-529 39-191 (398)
117 PRK09874 drug efflux system pr 98.3 1E-05 2.2E-10 85.1 13.0 173 337-530 13-193 (408)
118 PRK10429 melibiose:sodium symp 98.2 3.5E-05 7.7E-10 84.1 17.6 63 432-494 326-395 (473)
119 PRK15462 dipeptide/tripeptide 98.2 9.3E-05 2E-09 81.8 20.9 154 3-162 1-161 (493)
120 TIGR00881 2A0104 phosphoglycer 98.2 3.1E-06 6.7E-11 86.9 8.6 149 362-530 19-171 (379)
121 PRK10473 multidrug efflux syst 98.2 6.3E-06 1.4E-10 86.8 11.1 156 355-530 20-178 (392)
122 TIGR00886 2A0108 nitrite extru 98.2 7.9E-06 1.7E-10 84.5 11.2 142 339-488 2-148 (366)
123 TIGR00711 efflux_EmrB drug res 98.2 3.3E-06 7.2E-11 91.0 8.6 152 360-531 24-178 (485)
124 PRK09584 tppB putative tripept 98.2 2E-05 4.3E-10 87.1 13.9 176 333-527 15-198 (500)
125 KOG0569 Permease of the major 98.2 0.00032 6.9E-09 77.2 23.0 389 32-534 41-458 (485)
126 TIGR00890 2A0111 Oxalate/Forma 98.2 1.2E-05 2.7E-10 82.4 11.4 150 360-530 25-177 (377)
127 PF05977 MFS_3: Transmembrane 98.2 3.2E-05 7E-10 86.1 15.4 143 376-534 255-398 (524)
128 TIGR00805 oat sodium-independe 98.2 4.4E-06 9.5E-11 95.0 8.4 122 30-151 53-220 (633)
129 PF11700 ATG22: Vacuole efflux 98.1 0.0002 4.3E-09 78.9 21.0 183 329-530 272-468 (477)
130 PRK09556 uhpT sugar phosphate 98.1 1.6E-05 3.4E-10 86.5 12.2 175 338-529 25-211 (467)
131 PRK11043 putative transporter; 98.1 1.4E-05 3.1E-10 84.4 11.5 154 356-529 24-180 (401)
132 PRK11646 multidrug resistance 98.1 1.6E-05 3.5E-10 84.7 11.3 143 365-528 38-183 (400)
133 PRK09705 cynX putative cyanate 98.1 3.4E-05 7.4E-10 81.9 13.6 165 339-523 7-177 (393)
134 PRK11195 lysophospholipid tran 98.1 9E-06 2E-10 86.5 9.0 166 337-525 2-169 (393)
135 PRK09528 lacY galactoside perm 98.1 1.4E-05 3.1E-10 85.2 9.3 174 332-529 4-190 (420)
136 PRK03893 putative sialic acid 98.0 2E-05 4.4E-10 85.5 10.4 162 338-519 20-184 (496)
137 PRK11551 putative 3-hydroxyphe 98.0 2.3E-05 5.1E-10 82.6 10.5 147 362-528 39-188 (406)
138 PRK14995 methyl viologen resis 98.0 2.8E-05 6.1E-10 85.4 11.2 151 360-530 28-182 (495)
139 COG2807 CynX Cyanate permease 98.0 0.00055 1.2E-08 72.2 19.4 371 2-528 2-383 (395)
140 PRK10489 enterobactin exporter 98.0 1.3E-05 2.8E-10 85.4 7.1 176 332-527 11-194 (417)
141 PRK11273 glpT sn-glycerol-3-ph 98.0 6.9E-05 1.5E-09 81.1 12.7 148 363-530 54-208 (452)
142 KOG0255 Synaptic vesicle trans 97.9 0.00045 9.6E-09 76.2 18.8 146 30-189 102-250 (521)
143 PRK12307 putative sialic acid 97.9 5.4E-05 1.2E-09 80.4 11.1 137 360-516 40-179 (426)
144 TIGR00882 2A0105 oligosacchari 97.9 4.6E-05 9.9E-10 80.6 10.3 168 337-528 1-181 (396)
145 PRK15462 dipeptide/tripeptide 97.9 8.4E-05 1.8E-09 82.1 12.7 140 366-525 38-184 (493)
146 PF06609 TRI12: Fungal trichot 97.9 6.6E-05 1.4E-09 84.4 11.7 177 336-533 38-220 (599)
147 TIGR00879 SP MFS transporter, 97.9 7.4E-05 1.6E-09 79.0 11.4 134 373-526 73-213 (481)
148 TIGR00788 fbt folate/biopterin 97.9 0.00033 7.2E-09 76.7 16.8 111 21-137 36-153 (468)
149 COG2814 AraJ Arabinose efflux 97.9 9.6E-05 2.1E-09 79.1 12.1 171 341-531 16-189 (394)
150 PRK10207 dipeptide/tripeptide 97.9 0.00011 2.4E-09 81.1 12.6 139 365-522 42-186 (489)
151 PRK12382 putative transporter; 97.9 0.00013 2.7E-09 77.0 12.1 154 333-493 10-175 (392)
152 KOG3764 Vesicular amine transp 97.8 0.00019 4.1E-09 76.4 12.8 107 38-151 99-208 (464)
153 TIGR00896 CynX cyanate transpo 97.8 0.00012 2.7E-09 75.9 11.3 144 361-523 23-168 (355)
154 TIGR00897 2A0118 polyol permea 97.8 0.00014 3E-09 77.3 11.0 148 338-494 14-170 (402)
155 PLN00028 nitrate transmembrane 97.8 0.00026 5.7E-09 77.5 13.3 153 361-529 59-218 (476)
156 TIGR00806 rfc RFC reduced fola 97.8 0.00015 3.2E-09 79.5 10.9 126 25-158 41-169 (511)
157 PF01306 LacY_symp: LacY proto 97.8 0.00023 5E-09 76.8 12.3 114 409-535 290-405 (412)
158 PRK11010 ampG muropeptide tran 97.8 0.00022 4.8E-09 78.5 12.4 165 350-528 23-193 (491)
159 TIGR01301 GPH_sucrose GPH fami 97.7 0.0019 4.1E-08 71.3 19.4 93 432-535 382-476 (477)
160 KOG0254 Predicted transporter 97.7 0.00085 1.8E-08 74.2 16.9 136 45-192 89-228 (513)
161 TIGR00903 2A0129 major facilit 97.7 0.00024 5.3E-09 75.3 10.7 148 361-529 14-164 (368)
162 PRK10642 proline/glycine betai 97.7 0.00012 2.7E-09 80.1 8.6 165 22-194 262-430 (490)
163 PRK03633 putative MFS family t 97.7 0.00022 4.7E-09 75.1 10.2 148 337-492 5-156 (381)
164 TIGR00898 2A0119 cation transp 97.6 0.00018 3.9E-09 78.5 9.6 143 363-528 114-262 (505)
165 PRK08633 2-acyl-glycerophospho 97.6 0.00028 6E-09 84.8 12.0 154 332-492 3-165 (1146)
166 TIGR00899 2A0120 sugar efflux 97.6 0.00033 7.2E-09 72.5 10.6 146 364-529 24-175 (375)
167 TIGR00894 2A0114euk Na(+)-depe 97.6 0.00018 3.9E-09 77.8 8.3 136 374-529 79-218 (465)
168 PRK15011 sugar efflux transpor 97.6 0.00057 1.2E-08 72.4 11.6 171 338-529 15-193 (393)
169 KOG0252 Inorganic phosphate tr 97.5 0.0005 1.1E-08 74.5 10.7 378 40-530 79-498 (538)
170 PRK10077 xylE D-xylose transpo 97.5 0.00077 1.7E-08 72.8 12.3 145 373-529 57-214 (479)
171 PTZ00207 hypothetical protein; 97.5 0.00049 1.1E-08 77.7 11.0 167 340-529 27-204 (591)
172 PRK15034 nitrate/nitrite trans 97.5 0.00067 1.4E-08 74.5 11.7 183 336-529 32-231 (462)
173 PRK06814 acylglycerophosphoeth 97.5 0.0005 1.1E-08 82.9 11.1 178 332-529 5-194 (1140)
174 PRK05122 major facilitator sup 97.4 0.001 2.2E-08 70.1 11.6 139 364-522 42-191 (399)
175 COG2270 Permeases of the major 97.4 0.0099 2.2E-07 64.0 18.9 169 340-530 257-429 (438)
176 TIGR00805 oat sodium-independe 97.4 0.00018 3.9E-09 81.9 5.8 160 360-526 55-277 (633)
177 PF06609 TRI12: Fungal trichot 97.4 0.0062 1.4E-07 68.8 17.9 129 7-144 39-171 (599)
178 KOG0253 Synaptic vesicle trans 97.4 0.0025 5.4E-08 67.6 13.0 405 22-534 90-523 (528)
179 TIGR00901 2A0125 AmpG-related 97.3 0.0021 4.4E-08 66.7 11.9 160 361-529 11-177 (356)
180 PRK11128 putative 3-phenylprop 97.3 0.0027 5.9E-08 66.9 12.5 161 338-522 5-171 (382)
181 PRK11462 putative transporter; 97.2 0.012 2.6E-07 64.3 17.3 106 38-144 38-151 (460)
182 TIGR00887 2A0109 phosphate:H+ 97.2 0.0015 3.2E-08 71.9 10.1 145 374-525 59-220 (502)
183 COG3104 PTR2 Dipeptide/tripept 97.2 0.0017 3.7E-08 71.1 9.7 175 332-529 23-205 (498)
184 TIGR00883 2A0106 metabolite-pr 97.1 0.0038 8.1E-08 64.4 11.4 128 386-525 50-186 (394)
185 PRK11902 ampG muropeptide tran 97.1 0.003 6.5E-08 67.1 10.9 147 364-525 25-177 (402)
186 TIGR00885 fucP L-fucose:H+ sym 97.1 0.0029 6.4E-08 68.0 10.8 122 362-490 27-154 (410)
187 TIGR00880 2_A_01_02 Multidrug 97.1 0.00094 2E-08 58.0 5.5 101 56-163 9-111 (141)
188 PRK09952 shikimate transporter 97.1 0.0077 1.7E-07 65.1 13.5 124 386-521 79-211 (438)
189 PF05977 MFS_3: Transmembrane 97.1 0.0023 5.1E-08 71.3 9.7 163 332-523 4-183 (524)
190 TIGR00889 2A0110 nucleoside tr 96.9 0.0011 2.4E-08 71.4 5.7 148 10-163 211-369 (418)
191 PRK15075 citrate-proton sympor 96.9 0.003 6.6E-08 67.9 8.9 134 25-162 253-391 (434)
192 TIGR00806 rfc RFC reduced fola 96.9 0.0044 9.5E-08 68.2 9.9 156 363-537 51-210 (511)
193 TIGR02718 sider_RhtX_FptX side 96.9 0.003 6.6E-08 66.6 8.4 150 10-163 211-364 (390)
194 TIGR00902 2A0127 phenyl propri 96.9 0.0066 1.4E-07 64.1 10.9 153 341-518 10-167 (382)
195 PF03092 BT1: BT1 family; Int 96.8 0.032 6.9E-07 60.8 15.2 108 32-142 12-127 (433)
196 TIGR01301 GPH_sucrose GPH fami 96.8 0.0092 2E-07 65.9 11.1 170 358-530 24-218 (477)
197 KOG2533 Permease of the major 96.7 0.0057 1.2E-07 67.8 9.4 143 372-529 82-226 (495)
198 KOG3764 Vesicular amine transp 96.7 0.0027 5.8E-08 67.9 6.2 140 374-534 109-251 (464)
199 PRK10133 L-fucose transporter; 96.7 0.012 2.5E-07 64.0 11.0 142 339-489 27-176 (438)
200 KOG0255 Synaptic vesicle trans 96.6 0.008 1.7E-07 66.3 9.8 128 375-525 122-250 (521)
201 COG2271 UhpC Sugar phosphate p 96.6 0.012 2.5E-07 63.5 10.5 148 362-529 53-205 (448)
202 PRK10406 alpha-ketoglutarate t 96.4 0.023 5E-07 61.1 11.4 105 406-522 91-211 (432)
203 TIGR00926 2A1704 Peptide:H+ sy 96.3 0.021 4.6E-07 65.4 11.0 140 375-527 27-179 (654)
204 KOG0254 Predicted transporter 96.3 0.016 3.5E-07 64.0 9.2 132 374-525 92-225 (513)
205 KOG4686 Predicted sugar transp 96.1 0.038 8.2E-07 57.1 10.1 144 338-495 264-417 (459)
206 KOG2615 Permease of the major 96.1 0.022 4.9E-07 60.7 8.7 110 375-491 72-181 (451)
207 TIGR00792 gph sugar (Glycoside 95.9 0.04 8.7E-07 58.6 9.7 155 367-529 29-193 (437)
208 KOG1330 Sugar transporter/spin 95.0 0.0029 6.4E-08 68.7 -2.5 136 375-530 72-209 (493)
209 TIGR00788 fbt folate/biopterin 94.5 0.31 6.8E-06 53.5 11.6 177 336-530 24-209 (468)
210 KOG2504 Monocarboxylate transp 94.2 0.4 8.6E-06 53.5 11.7 170 334-529 46-220 (509)
211 KOG0252 Inorganic phosphate tr 94.1 0.54 1.2E-05 51.6 11.8 177 341-533 37-243 (538)
212 KOG2532 Permease of the major 93.6 0.22 4.7E-06 55.0 8.2 104 414-529 109-215 (466)
213 PF00854 PTR2: POT family; In 93.4 0.37 8.1E-06 50.9 9.2 113 410-539 3-128 (372)
214 PF03209 PUCC: PUCC protein; 93.3 9.8 0.00021 41.3 19.8 192 330-529 200-397 (403)
215 PRK09848 glucuronide transport 93.3 0.065 1.4E-06 57.8 3.4 154 37-196 256-427 (448)
216 PF03825 Nuc_H_symport: Nucleo 93.3 0.25 5.4E-06 53.3 7.8 147 10-163 210-362 (400)
217 KOG2816 Predicted transporter 93.0 4.8 0.0001 44.5 17.4 117 373-496 279-396 (463)
218 PRK09669 putative symporter Ya 92.6 0.57 1.2E-05 50.5 9.4 150 368-529 40-203 (444)
219 PF05978 UNC-93: Ion channel r 92.2 0.31 6.8E-06 45.8 5.9 141 339-490 4-149 (156)
220 PF13347 MFS_2: MFS/sugar tran 90.8 1.8 4E-05 46.3 10.9 181 8-196 225-424 (428)
221 TIGR01272 gluP glucose/galacto 90.8 0.49 1.1E-05 48.9 6.3 127 28-163 158-288 (310)
222 COG2211 MelB Na+/melibiose sym 90.8 22 0.00048 39.4 19.2 88 406-493 300-397 (467)
223 PF00083 Sugar_tr: Sugar (and 90.0 0.01 2.3E-07 63.5 -7.2 133 375-526 50-188 (451)
224 KOG1330 Sugar transporter/spin 89.9 0.23 5E-06 54.4 2.9 105 32-143 55-161 (493)
225 KOG3098 Uncharacterized conser 89.3 0.24 5.2E-06 54.5 2.5 181 9-196 240-438 (461)
226 KOG2325 Predicted transporter/ 89.1 4.3 9.4E-05 45.1 12.1 137 4-144 27-170 (488)
227 KOG0569 Permease of the major 89.1 3.3 7.2E-05 46.0 11.2 172 12-191 273-451 (485)
228 COG2223 NarK Nitrate/nitrite t 88.2 1.3 2.8E-05 48.0 7.0 131 29-163 237-373 (417)
229 PRK03612 spermidine synthase; 88.0 4.4 9.5E-05 45.4 11.6 58 433-491 113-170 (521)
230 KOG3762 Predicted transporter 87.1 0.83 1.8E-05 51.0 5.0 180 333-533 366-550 (618)
231 PF06813 Nodulin-like: Nodulin 86.9 7.4 0.00016 39.5 11.4 141 344-493 6-158 (250)
232 COG2807 CynX Cyanate permease 86.6 6.9 0.00015 42.0 11.3 110 404-528 75-184 (395)
233 PF01306 LacY_symp: LacY proto 86.6 1.6 3.4E-05 47.5 6.8 166 335-524 4-182 (412)
234 KOG2816 Predicted transporter 85.6 1.1 2.3E-05 49.6 4.9 121 36-163 268-390 (463)
235 COG0477 ProP Permeases of the 85.1 7.7 0.00017 36.9 10.2 131 374-522 42-177 (338)
236 PRK10429 melibiose:sodium symp 85.0 6.7 0.00015 42.8 10.8 107 374-482 45-159 (473)
237 PF11700 ATG22: Vacuole efflux 84.9 2.7 5.9E-05 46.6 7.7 131 23-159 295-432 (477)
238 PF01770 Folate_carrier: Reduc 82.1 13 0.00029 40.5 11.3 64 409-472 318-382 (412)
239 TIGR00939 2a57 Equilibrative N 80.7 19 0.0004 39.6 12.1 87 66-156 67-154 (437)
240 COG2270 Permeases of the major 79.4 1.4 3.1E-05 47.9 2.8 118 11-137 256-374 (438)
241 COG0738 FucP Fucose permease [ 79.3 9.3 0.0002 41.5 8.9 155 373-530 46-210 (422)
242 COG3104 PTR2 Dipeptide/tripept 79.1 2.8 6.1E-05 46.5 5.0 60 35-94 51-112 (498)
243 PF03092 BT1: BT1 family; Int 76.7 15 0.00032 40.0 9.8 132 386-532 39-177 (433)
244 PF03209 PUCC: PUCC protein; 75.3 31 0.00068 37.5 11.6 108 387-495 30-154 (403)
245 PF05631 DUF791: Protein of un 73.9 6.3 0.00014 42.0 5.8 89 14-119 47-136 (354)
246 COG2211 MelB Na+/melibiose sym 67.9 31 0.00067 38.3 9.7 145 375-535 52-209 (467)
247 TIGR00926 2A1704 Peptide:H+ sy 67.6 12 0.00025 43.3 6.7 59 36-94 14-74 (654)
248 PRK11462 putative transporter; 66.6 38 0.00083 36.9 10.2 107 375-483 49-163 (460)
249 KOG0253 Synaptic vesicle trans 64.9 81 0.0018 34.5 11.6 142 373-537 111-257 (528)
250 COG0477 ProP Permeases of the 64.5 20 0.00043 34.0 6.7 111 31-146 23-138 (338)
251 KOG2615 Permease of the major 55.9 13 0.00027 40.4 3.9 74 422-495 343-417 (451)
252 PF06779 DUF1228: Protein of u 46.1 64 0.0014 27.3 5.9 63 27-89 9-72 (85)
253 PF05631 DUF791: Protein of un 44.8 2.3E+02 0.0051 30.4 11.2 168 338-527 37-213 (354)
254 PF03137 OATP: Organic Anion T 42.5 8.3 0.00018 43.5 0.0 77 13-91 8-85 (539)
255 PF02487 CLN3: CLN3 protein; 41.7 5E+02 0.011 28.3 16.1 65 63-135 78-142 (402)
256 COG1575 MenA 1,4-dihydroxy-2-n 39.1 1.4E+02 0.0031 31.2 8.4 57 124-190 133-193 (303)
257 PF12832 MFS_1_like: MFS_1 lik 38.8 41 0.00089 27.6 3.6 51 32-83 23-74 (77)
258 PF11947 DUF3464: Protein of u 35.0 28 0.00062 32.7 2.3 40 435-474 107-147 (153)
259 COG2119 Predicted membrane pro 34.5 52 0.0011 32.0 4.0 52 43-94 116-185 (190)
260 PF04550 Phage_holin_2: Phage 30.6 72 0.0016 27.3 3.8 44 56-99 41-87 (89)
261 COG4262 Predicted spermidine s 28.5 8.1E+02 0.018 26.8 12.2 111 341-457 10-132 (508)
262 PRK12821 aspartyl/glutamyl-tRN 28.0 2E+02 0.0043 31.9 7.4 55 433-490 98-152 (477)
263 PF10283 zf-CCHH: Zinc-finger 27.8 24 0.00051 23.3 0.4 10 501-510 2-12 (26)
264 PF03547 Mem_trans: Membrane t 26.9 60 0.0013 34.3 3.5 33 131-163 23-55 (385)
265 PF05978 UNC-93: Ion channel r 26.6 1.5E+02 0.0032 27.8 5.6 85 61-153 54-139 (156)
266 KOG3810 Micronutrient transpor 23.2 2.3E+02 0.005 30.7 6.8 118 406-529 301-420 (433)
267 COG2383 Uncharacterized conser 23.1 67 0.0014 28.1 2.3 54 43-100 9-64 (109)
268 COG3086 RseC Positive regulato 23.0 1.5E+02 0.0032 27.8 4.7 49 472-539 82-130 (150)
269 KOG2563 Permease of the major 21.2 3.4E+02 0.0075 30.2 7.8 78 433-523 268-346 (480)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-83 Score=708.65 Aligned_cols=508 Identities=15% Similarity=0.156 Sum_probs=417.1
Q ss_pred cchhHHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhcccchhhhhhccccchHHHHHHHHHHHH
Q 009176 6 NILQWLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLFGWISGVASVYLPLWLVLLIGSTLGL 85 (541)
Q Consensus 6 ~~~rw~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~G~~~Gll~d~~pp~~vlliGa~~~~ 85 (541)
..+||+++++++|+|.++|++|.|++|++++|+.+|+||+|+++++..+.....+++++|.++|++|||.++++|+++..
T Consensus 23 e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999998885533333445599999999999999999999999
Q ss_pred HHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCCCCceehhhHHHhhhhHHHHHHHHHHHHhcC
Q 009176 86 IGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPFDRQVAVGITSSYLGLSAKLYTSAVNAIETS 165 (541)
Q Consensus 86 ~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~RG~a~gllk~~~GLSaaift~i~~~~~~~ 165 (541)
+||++.|+++++.+. .++|++|++.++.|+|++++|+++.+++++|||++||+++|+.+++.|++++++++++.+++.
T Consensus 103 iG~ll~ala~~~~i~-~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~- 180 (591)
T PTZ00207 103 LGTLLFALTFQEVIE-GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS- 180 (591)
T ss_pred HHHHHHHHHhccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 999999999998874 589999999999999999999999999999999999999999999999999999999999983
Q ss_pred CCCCcccchhhhhchhhhHhHhhccceeeeecCCCc-cccc-ccccccCC-----------------cchhhhHHHHHHH
Q 009176 166 SPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQ-ESSS-SSRRRTRG-----------------GFVFMFFVTIVTG 226 (541)
Q Consensus 166 ~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~-~~~~-~~~~~~~~-----------------~f~~~~~~~~~~a 226 (541)
+|.+.+++++++.+.+++++.+.++|.. |... .++. ..+++|+. +|...++++++++
T Consensus 181 ---~~~~~~fl~l~vl~~vv~ll~~~~vr~p-~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~ 256 (591)
T PTZ00207 181 ---DNTSAYFFFLMSFALVVGILAIVFMRLP-PFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILI 256 (591)
T ss_pred ---HhHHHHHHHHHHHHHHHHHHHHhheeCC-cchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHH
Confidence 6888999999999999999999999987 4322 1111 11122222 6888889999999
Q ss_pred HHHHHhhccccc-ccCCCCchhHHHHHH-HHhhhc-cccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCC
Q 009176 227 CYAVLGSLDLSK-LKTLLPPVKNLIGIV-ICLLAP-LVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVAT 303 (541)
Q Consensus 227 ~yl~~~~~~~~~-~~~~~~~~~~~~~~~-~ll~~P-l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (541)
+|+++.++.++. +.++.....++++++ ++|+.| +++|++.. + ..+++ +++ +.+.++.+ +++++
T Consensus 257 ~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~-~----~~~~~-~~~---~~~~~~~~-----~~~~~ 322 (591)
T PTZ00207 257 VFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTF-D----GKRPH-DDS---DGKAKEHV-----EAGEE 322 (591)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHh-c----cCCcC-CCc---cccccccc-----ccccc
Confidence 999999987653 333344455666666 788899 88998752 1 11110 000 00000000 00000
Q ss_pred ccccccccCCCCCCCcc-CCCCccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhh-cC-Ccc--cc-hh
Q 009176 304 KEEVDHQLRDDDSDGIY-HGLGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESR-GC-SGT--SS-LV 377 (541)
Q Consensus 304 ~~~~~~~~~~~~~~~~~-~~~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~sl-g~-~~~--~~-~V 377 (541)
..+++ ++...++.+ ++|+++| |.+|++++.|||++|+.++||.|+|++++||++||+|++ |+ .+. +. +|
T Consensus 323 ~~~~~---~~~~~~~~~~~~P~~~~--t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~v 397 (591)
T PTZ00207 323 VSAAE---DKVVETDVDYIAPQFQE--TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLT 397 (591)
T ss_pred ccccc---cccccccccCCCCCCcc--hHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeeh
Confidence 00000 000000111 2345555 999999999999999999999999999999999999999 88 444 44 89
Q ss_pred hhhhhcccccccccccchhhhcccCC--CCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHH
Q 009176 378 SLSSSFGFFGRLIPSLFGYFFSRSKH--MIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTT 454 (541)
Q Consensus 378 sl~Si~N~~GRl~~G~~s~~~~~~~~--~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~i 454 (541)
|++|+|||+||+++|++|.+..|++. ++||+.++++.++ |++++++++...+ ..||+.++++|+|||++|+++|++
T Consensus 398 sL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i 476 (591)
T PTZ00207 398 VLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALV 476 (591)
T ss_pred hhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHH
Confidence 99999999999999999955533321 2899999999888 8888888887777 789999999999999999999999
Q ss_pred hhhhcCCCcccchhhhhhhhhhhhHHHH-HHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009176 455 TTELFGTKNFSVNHNIVVANIPIGSFLF-GYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYART 533 (541)
Q Consensus 455 vse~FG~k~fg~nyg~~~~a~~~Gs~l~-~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~ 533 (541)
++|+|| ||+|++||+++++.|+|++++ ..++|.+||+|+.|+++.+|.|++||+.+|+|++++|++|+++++++++|+
T Consensus 477 ~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~ 555 (591)
T PTZ00207 477 TRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQY 555 (591)
T ss_pred HHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeeh
Confidence 999999 999999999999999999999 689999999999987777999999999999999999999999999999999
Q ss_pred hcccccc
Q 009176 534 RKFYSQR 540 (541)
Q Consensus 534 r~~Y~~~ 540 (541)
||||++.
T Consensus 556 r~~y~~~ 562 (591)
T PTZ00207 556 RRLCLKA 562 (591)
T ss_pred HHHHHHH
Confidence 9999953
No 2
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=100.00 E-value=3.1e-66 Score=517.86 Aligned_cols=249 Identities=35% Similarity=0.613 Sum_probs=232.3
Q ss_pred hHHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhcccchhhhhhccccchHHHHHHHHHHHHHHH
Q 009176 9 QWLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLFGWISGVASVYLPLWLVLLIGSTLGLIGY 88 (541)
Q Consensus 9 rw~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~G~~~Gll~d~~pp~~vlliGa~~~~~GY 88 (541)
||++|++++|+|+++||+|.||+||||||+++||||+|+|+|++++|+|+++|+++|+++|++|||+++++|++++++||
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCCCCceehhhHHHhhhhHHHHHHHHHHHHhcCCCC
Q 009176 89 GLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPFDRQVAVGITSSYLGLSAKLYTSAVNAIETSSPN 168 (541)
Q Consensus 89 ~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~ 168 (541)
+++|++++++++++|+|+||++++++|||++|+|||+++||+||||+|||+|+|++|+++||||+||||+|+++| +
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f----~ 156 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFF----G 156 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHc----C
Confidence 999999999998899999999999999999999999999999999999999999999999999999999999999 4
Q ss_pred CcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhccccc-ccCCCCchh
Q 009176 169 KRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSK-LKTLLPPVK 247 (541)
Q Consensus 169 ~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~-~~~~~~~~~ 247 (541)
+|+++|++|+|+.|.++++++++++|++ |+.++ ..++++|+++|...+.+++++|+|+++.++.++. +.++.....
T Consensus 157 ~~~~~fll~la~~~~~v~l~~~~~vr~~-~~~~~--~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~ 233 (250)
T PF06813_consen 157 DDPSSFLLFLAVLPAVVCLVAMFFVRPV-PPSPS--RTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVI 233 (250)
T ss_pred CChHHHHHHHHHHHHHHHHHHhhheecc-CCccc--cccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHH
Confidence 8999999999999999999999999999 54321 1245677788999999999999999999987765 445555666
Q ss_pred HHHHHHHHhhhcccccc
Q 009176 248 NLIGIVICLLAPLVIPL 264 (541)
Q Consensus 248 ~~~~~~~ll~~Pl~ip~ 264 (541)
..++++++|++|++||+
T Consensus 234 ~~~il~llL~~Pl~i~~ 250 (250)
T PF06813_consen 234 FAVILLLLLLLPLAIPV 250 (250)
T ss_pred HHHHHHHHHHhhhhccC
Confidence 78888999999999985
No 3
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.90 E-value=2.3e-23 Score=213.71 Aligned_cols=370 Identities=18% Similarity=0.224 Sum_probs=261.9
Q ss_pred hhHHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHH
Q 009176 8 LQWLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLI 86 (541)
Q Consensus 8 ~rw~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~ 86 (541)
+||+.+++.+....+.|..|.++.+.|.+++.+|+|.+|...+..+..+|..+ .++.|.+.||+|+|.++.+|.+...+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~ 80 (377)
T TIGR00890 1 RWWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGL 80 (377)
T ss_pred CeEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHH
Confidence 46889999999999999999999999999999999999999999999999966 89999999999999999999999888
Q ss_pred HHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCCCCceehhhHHHhhhhHHHHHHHHHHHHhcCC
Q 009176 87 GYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPFDRQVAVGITSSYLGLSAKLYTSAVNAIETSS 166 (541)
Q Consensus 87 GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~RG~a~gllk~~~GLSaaift~i~~~~~~~~ 166 (541)
|+...-.+ .++|++.+..++.|.+......++.....+.||++||++.|+.-...++++.+...+...+..
T Consensus 81 ~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-- 151 (377)
T TIGR00890 81 GFTFYAIA-------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVIN-- 151 (377)
T ss_pred HHHHHHHH-------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHh--
Confidence 88554332 246777777778888887766677777778999999999999888888877665544443320
Q ss_pred CCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCch
Q 009176 167 PNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPV 246 (541)
Q Consensus 167 ~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~ 246 (541)
..+-....+..++.+.+..++...++|..
T Consensus 152 -~~~~~~~f~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------- 180 (377)
T TIGR00890 152 -LEGVPAAFIYMGIIFLLVIVLGAFLIGYP-------------------------------------------------- 180 (377)
T ss_pred -cccHHHHHHHHHHHHHHHHHHHHHheecC--------------------------------------------------
Confidence 00000000011111111000000000000
Q ss_pred hHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCcc
Q 009176 247 KNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAK 326 (541)
Q Consensus 247 ~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (541)
+++. + ++ +++.. .
T Consensus 181 ----------------------------------~~~~--------------~-~~---------~~~~~---------~ 193 (377)
T TIGR00890 181 ----------------------------------PGQL--------------I-KT---------NIEVS---------V 193 (377)
T ss_pred ----------------------------------chhc--------------c-cc---------Ccccc---------h
Confidence 0000 0 00 00000 0
Q ss_pred ccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCC
Q 009176 327 EEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHM 404 (541)
Q Consensus 327 ~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~ 404 (541)
++.+.++.++++++|++++.+++.........+...+..+++|.++ .....++.++.+.+||+..|++.|..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~------ 267 (377)
T TIGR00890 194 KDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI------ 267 (377)
T ss_pred hhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 1234567889999999998888776665555566666777777754 45678888999999999999884432
Q ss_pred CChhHHHHHHHHHHHHHHHHHhhccc--c-hhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHH
Q 009176 405 IPSPASIGALMAPMAGAFMLLLNETN--V-ALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFL 481 (541)
Q Consensus 405 ~~R~~~l~~~~~~~~~~~ll~~~~~~--~-~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l 481 (541)
+|...+....+++.++.+++....+ . .++....+.|+++|..+++.|+.++|.++.|+.++.+|+......+|..+
T Consensus 268 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 346 (377)
T TIGR00890 268 -GRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIF 346 (377)
T ss_pred -hhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHH
Confidence 2333333444455555444443332 2 23345678899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHH
Q 009176 482 FGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTF 524 (541)
Q Consensus 482 ~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~ 524 (541)
++.++|.++|..+ |+..|.+.+++++++++
T Consensus 347 ~~~~~g~l~~~~g-------------~~~~f~~~~~~~~~~~~ 376 (377)
T TIGR00890 347 GGLIASHALTEIG-------------FEYTFIVTGAFALTSLA 376 (377)
T ss_pred HHHHHHHHHhhhc-------------hhhHHHHHHHHHHHhcc
Confidence 9999999998754 79999999888777653
No 4
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.90 E-value=2.4e-23 Score=228.54 Aligned_cols=426 Identities=18% Similarity=0.197 Sum_probs=308.0
Q ss_pred hHHHHHHHHHHH-HhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHH
Q 009176 9 QWLSLVGAIWLQ-SINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLI 86 (541)
Q Consensus 9 rw~~l~as~~v~-~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~ 86 (541)
-|++.+++.++. .+-|-.|.|+++=+++++.++-+-+|...|+...---.++ |++++.++|++|.|.+.++|++..+.
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH
Confidence 499999998886 7889999999999999999999999977665554444455 99999999999999999999999999
Q ss_pred HHHHHHHHhhhccccchHHHHHH-HHHHhccccccccceeeeeecccCCCCCceehhhHHHhhhhHHHHHHHHHHHHhcC
Q 009176 87 GYGLQYLFLTHTISHLSYAHIFL-LTVLAGNSICWINTVCYVVTIKNFPFDRQVAVGITSSYLGLSAKLYTSAVNAIETS 165 (541)
Q Consensus 87 GY~~~~l~~~~~i~~~~~w~l~~-~~~l~g~g~~~~nTa~lvt~v~NFP~~RG~a~gllk~~~GLSaaift~i~~~~~~~ 165 (541)
|+..-..+- ++|++.+ +-++.|.|.++..+.+++.--+-|+++|+.|+|+..+--|+...+|+.+-..++.
T Consensus 124 g~~lssF~~-------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~- 195 (509)
T KOG2504|consen 124 GLLLSSFAT-------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLS- 195 (509)
T ss_pred HHHHHHHHh-------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHH-
Confidence 987755443 3577655 6788899999999999999889999999999999999999999999999998873
Q ss_pred CCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCc
Q 009176 166 SPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPP 245 (541)
Q Consensus 166 ~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~ 245 (541)
.-+....++.+.++. +.++++....||. +...+ +. .+++. . + ...
T Consensus 196 -~~G~r~~~l~~~~~~--l~~~~~~~~~rp~-~~~~~----~~-~~~~~-~-------------------~-~~~----- 240 (509)
T KOG2504|consen 196 -KYGWRGALLIFGGIS--LNVLVAGALLRPL-SPPKK----PN-EEKDL-R-------------------N-SAA----- 240 (509)
T ss_pred -HhCcHHHHHHHHHHH--HHHHHHHHHcCCC-CcCCC----ch-hhhhh-c-------------------c-ccc-----
Confidence 124566666666654 5567777788887 33311 11 00000 0 0 000
Q ss_pred hhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCC-C
Q 009176 246 VKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGL-G 324 (541)
Q Consensus 246 ~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 324 (541)
+ .+......+...+++. .+..+..+ ++.+.. +...++.+..+ +
T Consensus 241 ---------------------~-~~~~~~~~~~~~~~~~-------~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~ 284 (509)
T KOG2504|consen 241 ---------------------S-VESTPKPVELRISERD-------SGLKKLSL--SNLATL-----KRGPDKWRNSPLQ 284 (509)
T ss_pred ---------------------c-ccccccccccccccCC-------CCCCcccc--cchhhh-----hhCCccccccchh
Confidence 0 0000000000000000 00000000 000000 00000000000 0
Q ss_pred ccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccC
Q 009176 325 AKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSK 402 (541)
Q Consensus 325 ~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~ 402 (541)
+..+.--+++++++.||++.+...+....=....-.+...+++.|++ +++..+|++++.|.+||++.|++.|..
T Consensus 285 ~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~---- 360 (509)
T KOG2504|consen 285 AFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP---- 360 (509)
T ss_pred hhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc----
Confidence 11112236899999999998877776555555555677778888885 678999999999999999999996652
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHH
Q 009176 403 HMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFL 481 (541)
Q Consensus 403 ~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l 481 (541)
..++.+...++++...++.+..+...+ ..+...+++.|+|.|...++.|.++.|+.|+++++.-||++.+..+++.++
T Consensus 361 -~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~ 439 (509)
T KOG2504|consen 361 -GIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALV 439 (509)
T ss_pred -ccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHc
Confidence 234556666666666666666666655 468889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 482 FGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 482 ~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
+|+++|++||.+++ |..+|+..+...+++.++.++..
T Consensus 440 gpPiag~~~d~tg~------------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 440 GPPIAGLLYDITGN------------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred CcccceeeeeccCC------------eeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999999 99999999999888887777665
No 5
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.84 E-value=5.6e-20 Score=198.99 Aligned_cols=406 Identities=14% Similarity=0.094 Sum_probs=257.9
Q ss_pred hhHHHHHHHHHHHHh-cCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHH
Q 009176 8 LQWLSLVGAIWLQSI-NGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGL 85 (541)
Q Consensus 8 ~rw~~l~as~~v~~~-~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~ 85 (541)
.||..++++++.+.. -+..+.++.|-+++++.+|+|+++...+.....++..+ +++.|.+.||+++|.++++|.+...
T Consensus 16 ~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 95 (455)
T TIGR00892 16 WGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLAS 95 (455)
T ss_pred cchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHH
Confidence 479888888887753 45567789999999999999999999988887777654 8899999999999999998887777
Q ss_pred HHHHHHHHHhhhccccchHHHHHHH-HHHhccccccccceeeeeecccCCCCCceehhhHHHhhhhHHHHHHHHHHHHhc
Q 009176 86 IGYGLQYLFLTHTISHLSYAHIFLL-TVLAGNSICWINTVCYVVTIKNFPFDRQVAVGITSSYLGLSAKLYTSAVNAIET 164 (541)
Q Consensus 86 ~GY~~~~l~~~~~i~~~~~w~l~~~-~~l~g~g~~~~nTa~lvt~v~NFP~~RG~a~gllk~~~GLSaaift~i~~~~~~ 164 (541)
++..+.- ... .+|++.+. -++.|.+.+.....+.....+.||++||++.|+.....++++.+...+...+..
T Consensus 96 ~~~~~~~--~~~-----~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~ 168 (455)
T TIGR00892 96 LGMILAS--FSS-----NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFE 168 (455)
T ss_pred HHHHHHH--Hhh-----hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 7765542 222 34655443 245576666443344444458999999999999998888888877666555441
Q ss_pred CCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCC
Q 009176 165 SSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLP 244 (541)
Q Consensus 165 ~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~ 244 (541)
. .+=...|+. .+. ..+++++...+.|+. +...+ .+++++
T Consensus 169 -~-~gwr~~f~~-~~~-~~~~~~v~~~~~~~~-~~~~~----~~~~~~-------------------------------- 207 (455)
T TIGR00892 169 -S-FGWRGSFLI-LGG-LLLHCCVCGALMRPV-GPSQR----VSKSKS-------------------------------- 207 (455)
T ss_pred -H-hChHHHHHH-HHH-HHHHHHHHHHHhCCC-Ccccc----cccccc--------------------------------
Confidence 0 000111111 111 112222222233322 11000 000000
Q ss_pred chhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCC
Q 009176 245 PVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLG 324 (541)
Q Consensus 245 ~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (541)
+ +. . +++...+ +.... ... +
T Consensus 208 --------------------------------~---~~-~----------------~~~~~~~----~~~~~-~~~---~ 227 (455)
T TIGR00892 208 --------------------------------K---EG-L----------------PPDGSTK----KLSKK-STA---E 227 (455)
T ss_pred --------------------------------c---cc-C----------------CCCCccc----ccccc-chh---h
Confidence 0 00 0 0000000 00000 000 0
Q ss_pred ccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccC
Q 009176 325 AKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSK 402 (541)
Q Consensus 325 ~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~ 402 (541)
...+.-..+.+++++||.+.+..++....-.+....+.+..++.|++ +.+...++.++.+.++|.++|.+.|.. +
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~---~ 304 (455)
T TIGR00892 228 KINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK---W 304 (455)
T ss_pred hhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc---c
Confidence 00111113688999999887766654443334444566677777875 456788899999999999999885421 1
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHH
Q 009176 403 HMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFL 481 (541)
Q Consensus 403 ~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l 481 (541)
++..|...+........++.++.....+ ..+++...+.|+++|..+...++++.|.++.++.++.+|++.+...+|..+
T Consensus 305 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~i 384 (455)
T TIGR00892 305 IRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLI 384 (455)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHc
Confidence 0112222222222323333333333333 346777889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHH----HHHHHhhhhcc
Q 009176 482 FGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFL----ALILYARTRKF 536 (541)
Q Consensus 482 ~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~l----sl~l~~r~r~~ 536 (541)
+|.++|.++|..++ |+..|++.+++++++.+. .++.++++||.
T Consensus 385 gp~i~G~l~~~~g~------------~~~~f~~~~~~~li~~~~~~~~~~~~~~~~~~~ 431 (455)
T TIGR00892 385 GPPLAGRLVDATKN------------YKYIFYASGSIVVSAGLFLAIGNYINYRLLAKE 431 (455)
T ss_pred cccceeeeehhcCC------------cchHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998877 899999998887777663 34446666653
No 6
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.80 E-value=1.2e-18 Score=183.55 Aligned_cols=386 Identities=13% Similarity=0.050 Sum_probs=245.3
Q ss_pred CCccchhHHHHHHHHHHHHhcC-CccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHH
Q 009176 3 LNSNILQWLSLVGAIWLQSING-TNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIG 80 (541)
Q Consensus 3 ~~~~~~rw~~l~as~~v~~~~G-t~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliG 80 (541)
.++++.+|..+..+.++....| ..+.++...|++++.+|+|.+|...+..+..+|..+ .++.|.+.||+|+|.++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 86 (406)
T PRK11551 7 SASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVS 86 (406)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence 4667899999998888887655 356778888999999999999999999999999866 79999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHH
Q 009176 81 STLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAV 159 (541)
Q Consensus 81 a~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~ 159 (541)
.+...++.....+. .++|.+.+..++.|.+.+...++......+.||+ +||++.|+.-....+++.+-..+.
T Consensus 87 ~~~~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 159 (406)
T PRK11551 87 VALFGLFSLATAQA-------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIG 159 (406)
T ss_pred HHHHHHHHHHHHHh-------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877776554432 2457777778888888877666665666688975 799999987665555554433332
Q ss_pred HHHhcCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccc
Q 009176 160 NAIETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKL 239 (541)
Q Consensus 160 ~~~~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~ 239 (541)
..... ..+-.......+..+.+..
T Consensus 160 ~~~~~---~~~~~~~~~~~~~~~~~~~----------------------------------------------------- 183 (406)
T PRK11551 160 VLAAG---DAAWRHIFYVGGVGPLLLV----------------------------------------------------- 183 (406)
T ss_pred HHHcc---ccCHHHHHHHHHHHHHHHH-----------------------------------------------------
Confidence 11110 0000000000000000000
Q ss_pred cCCCCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCc
Q 009176 240 KTLLPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGI 319 (541)
Q Consensus 240 ~~~~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (541)
.+..+..| + .++.. +++ + + ++++ +...+..
T Consensus 184 ------------~~~~~~l~----------~---~~~~~--~~~--~------------~-~~~~--------~~~~~~~ 213 (406)
T PRK11551 184 ------------PLLMRWLP----------E---SRAFA--QAA--G------------A-GKQR--------APVLRAL 213 (406)
T ss_pred ------------HHHHHhCC----------C---ChhHH--hcc--C------------c-chhh--------hhhHHHH
Confidence 00000111 0 00000 000 0 0 0000 0000000
Q ss_pred cCCCCccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhh
Q 009176 320 YHGLGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYF 397 (541)
Q Consensus 320 ~~~~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~ 397 (541)
...+ +....+.+++.+++....-..+.+.+.++.++.|.+ +.....++..+.+.+||+..|.+.|.
T Consensus 214 ---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 281 (406)
T PRK11551 214 ---------FGEG---RATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDR 281 (406)
T ss_pred ---------hhhh---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 112233333333333222223444566777777775 45677788888999999999988443
Q ss_pred hcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhh
Q 009176 398 FSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIP 476 (541)
Q Consensus 398 ~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~ 476 (541)
. +|...+....+.++++.+++....+ ..+++...+.|++.++..+..++++.|.+..++.|+..|+..+...
T Consensus 282 ~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 354 (406)
T PRK11551 282 L-------RPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGR 354 (406)
T ss_pred H-------hHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhh
Confidence 2 3333333333334444444433333 3466677888999988899999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhh
Q 009176 477 IGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYAR 532 (541)
Q Consensus 477 ~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r 532 (541)
+|+.++|.++|.++|..+. |...|.+...+++++.++++.+.+|
T Consensus 355 ~g~~~g~~~~g~l~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (406)
T PRK11551 355 LGSMAGPLLAGQLLALGRS------------TVGVIGASIPVILVAALAALLLVSR 398 (406)
T ss_pred HHHHHHhhhHhhhhccCCc------------hHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999998766 7888888888888877777766443
No 7
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.80 E-value=1.7e-18 Score=177.61 Aligned_cols=381 Identities=15% Similarity=0.114 Sum_probs=246.9
Q ss_pred CccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 009176 25 TNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLS 103 (541)
Q Consensus 25 t~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~ 103 (541)
..+.++...|.+++.+|+|.+|...+.....++..+ .++.|.+.||+|+|.++.++.+...++......+- +
T Consensus 9 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~-------~ 81 (399)
T TIGR00893 9 DRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG-------A 81 (399)
T ss_pred HHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc-------C
Confidence 346778888999999999999999999999999866 89999999999999999999888888776655432 4
Q ss_pred HHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhh
Q 009176 104 YAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFP 182 (541)
Q Consensus 104 ~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p 182 (541)
+|.+.+..++.|.+.+...++......+.+|+ +||++.|+.-...++++.+-..+...+.. ..+-.....+.+...
T Consensus 82 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~~~~~~~ 158 (399)
T TIGR00893 82 YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI---HFSWQWAFIIEGVLG 158 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH---hCCchHHHHHHHHHH
Confidence 67788888888998887777777777789986 79999999999998888887777665542 112222222222222
Q ss_pred hHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhcccc
Q 009176 183 LLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVI 262 (541)
Q Consensus 183 ~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~i 262 (541)
.+..++...+.+.. ++ +++.++
T Consensus 159 ~~~~~~~~~~~~~~--~~------~~~~~~-------------------------------------------------- 180 (399)
T TIGR00893 159 IIWGVLWLKFIPDP--PQ------KAKWLT-------------------------------------------------- 180 (399)
T ss_pred HHHHHHhhheecCC--CC------ccccCC--------------------------------------------------
Confidence 22222222222211 10 000000
Q ss_pred ccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHH
Q 009176 263 PLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWL 342 (541)
Q Consensus 263 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwl 342 (541)
+ +.+++. .++. .++ .+ ++++. ..+..+.++.++++++|.
T Consensus 181 -------~--~~~~~~--~~~~------------~~~-~~---------~~~~~--------~~~~~~~~~~~~~~~~~~ 219 (399)
T TIGR00893 181 -------E--EEKYIV--VGGL------------LAE-QQ---------GKGPS--------TPKKYQIKELLKDRRVWG 219 (399)
T ss_pred -------H--HHHhhc--chhh------------ccc-cc---------ccccc--------CCCccchHHHhcCHHHHH
Confidence 0 000000 0000 000 00 00000 011234678899999999
Q ss_pred HHHHHHHhhcccceeecchHHHHh-hhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHH----HHHH
Q 009176 343 YFFVYFSGATLGLVFLNNLGQIAE-SRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASI----GALM 415 (541)
Q Consensus 343 lf~~~~~g~g~Glm~I~n~g~i~~-slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l----~~~~ 415 (541)
+++..++......++.....+..+ ..|.+ +.....++..+.+.+|++.+|.+.|...||+ .+.... ....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~ 296 (399)
T TIGR00893 220 LALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG---KSLVFARKTAIIAG 296 (399)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cchhHHHHHHHHHH
Confidence 999888877666666666666664 45664 4556778888999999999998854432321 111111 1111
Q ss_pred HHHHHHHHHHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCC
Q 009176 416 APMAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGH 495 (541)
Q Consensus 416 ~~~~~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~ 495 (541)
+...+..+......+....+...+++....+.++...++++|.++.++.|+.+|+..+...+|+.+++.+.|.++|..++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~ 376 (399)
T TIGR00893 297 LVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGS 376 (399)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCc
Confidence 11111111111111222333333344433337889999999999999999999999999999999999999999998776
Q ss_pred CCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 496 NAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 496 ~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
|+..|.+.+++++++.++.+++
T Consensus 377 ------------~~~~~~~~~~~~~~~~~~~~~~ 398 (399)
T TIGR00893 377 ------------FAGALMVVAALALIGALSYLLL 398 (399)
T ss_pred ------------hhHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999888887776543
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.78 E-value=9.7e-18 Score=179.99 Aligned_cols=383 Identities=18% Similarity=0.091 Sum_probs=224.2
Q ss_pred cCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009176 23 NGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISH 101 (541)
Q Consensus 23 ~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~ 101 (541)
....+.++.+-|++++.+|+|.+|...+.....+|..+ .++.|.+.||++++.++.+|.+...++..+....
T Consensus 36 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------- 108 (434)
T PRK11663 36 YFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS------- 108 (434)
T ss_pred HHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH-------
Confidence 34556788899999999999999999999999999855 8999999999999999999988888876544332
Q ss_pred chHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhch
Q 009176 102 LSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSI 180 (541)
Q Consensus 102 ~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~ 180 (541)
.++|.+++.-++.|.+++....+......+.||+ +||++.|+.-...++++.+-..+...+.. .-+-..-.+..++
T Consensus 109 ~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~---~~gw~~~f~~~~i 185 (434)
T PRK11663 109 SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL---HYGWRYGMMIAGI 185 (434)
T ss_pred hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cccHHHHHHHHHH
Confidence 2467777766666666665544555555688986 69999999988888888776665554441 0011111111111
Q ss_pred hhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhcc
Q 009176 181 FPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPL 260 (541)
Q Consensus 181 ~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl 260 (541)
...+++++...++|.. | + +.
T Consensus 186 ~~~~~~~~~~~~~~~~-p-~------~~---------------------------------------------------- 205 (434)
T PRK11663 186 IAIVVGLFLCWRLRDK-P-Q------AM---------------------------------------------------- 205 (434)
T ss_pred HHHHHHHHHHHHcCCC-H-h------hc----------------------------------------------------
Confidence 1111111111111110 0 0 00
Q ss_pred ccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhH
Q 009176 261 VIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDF 340 (541)
Q Consensus 261 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~F 340 (541)
+ .++.++. ++++++.. ++.+..+. + .++.-....++++.+
T Consensus 206 ---------------~----~~~~~~~-----------~~~~~~~~-----~~~~~~~~----~-~~~~~~~~~~~~~~~ 245 (434)
T PRK11663 206 ---------------G----LPSVGEW-----------RHDALELA-----QQQEGAGL----S-RKEILTKYVLLNPYI 245 (434)
T ss_pred ---------------C----CCCcccc-----------cccccccc-----hhccccCC----C-hhhhHHHHHhcChHH
Confidence 0 0000000 00000000 00000000 0 011111236778999
Q ss_pred HHHHHHHHHhhcccceeecchHHHH-hhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHH
Q 009176 341 WLYFFVYFSGATLGLVFLNNLGQIA-ESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAP 417 (541)
Q Consensus 341 wllf~~~~~g~g~Glm~I~n~g~i~-~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~ 417 (541)
|.+.+.+++....-..+.+-+.+.. +..|++ ++....+++.+.+.+||+++|+++|...+++ +.+......+...+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-r~~~~~~~~~~~~~ 324 (434)
T PRK11663 246 WLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGN-RGPMNLIFAAGILL 324 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCC-ccHHHHHHHHHHHH
Confidence 9987766553322111112233344 345765 4556888899999999999999844331221 00111111112222
Q ss_pred HHHHHHHHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCC
Q 009176 418 MAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNA 497 (541)
Q Consensus 418 ~~~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~ 497 (541)
.....+++.......+++...++|+...+...+....++|.|+.++.|+--|+......+|..++|.+.|++.|..+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g--- 401 (434)
T PRK11663 325 SVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH--- 401 (434)
T ss_pred HHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc---
Confidence 22222222221112233333444443333344556788999999999999999999999999999999999999743
Q ss_pred CCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 498 HNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 498 ~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
|+.+|++.++++++++++.+..
T Consensus 402 ----------~~~~f~~~~~~~~~~~~~~~~~ 423 (434)
T PRK11663 402 ----------WTGFFVVISIAAGISALLLLPF 423 (434)
T ss_pred ----------cHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999888887666544
No 9
>PRK03699 putative transporter; Provisional
Probab=99.76 E-value=8.6e-17 Score=170.06 Aligned_cols=376 Identities=14% Similarity=0.089 Sum_probs=239.9
Q ss_pred chhHHHHHHHHHHH-HhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHH
Q 009176 7 ILQWLSLVGAIWLQ-SINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLG 84 (541)
Q Consensus 7 ~~rw~~l~as~~v~-~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~ 84 (541)
.|||.....+.... +..+..+.++..-|++++.+|+|.+|...+.....+|..+ .+++|.+.||++++.++.++.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 45554444444444 4445578899999999999999999999999999999866 679999999999999999888888
Q ss_pred HHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 85 LIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 85 ~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
.++..+...+ .++|++.+..++.|.+.+...+.+.....+.||+ +||.+.++.-...++++.+...+...+.
T Consensus 83 ~i~~~l~~~~-------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 83 ILAVAGLMFS-------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred HHHHHHHHHc-------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877665432 2457777777788887776666665566688887 6899888877777777665554443332
Q ss_pred cCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCC
Q 009176 164 TSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLL 243 (541)
Q Consensus 164 ~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~ 243 (541)
. +. . . ....+.. .+..
T Consensus 156 ~-----~~------------------------~----------g-------w~~~f~~---~~~~--------------- 171 (394)
T PRK03699 156 A-----RS------------------------I----------E-------WYWVYAC---IGLV--------------- 171 (394)
T ss_pred h-----cc------------------------c----------c-------HHHHHHH---HHHH---------------
Confidence 0 00 0 0 0000000 0000
Q ss_pred CchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCC
Q 009176 244 PPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGL 323 (541)
Q Consensus 244 ~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (541)
..+.. ++..+ .+ . |+.++ + + ++ ++.+. .
T Consensus 172 -----~~~~~-~~~~~----~~--------~-------p~~~~---~--------~-~~---------~~~~~-~----- 199 (394)
T PRK03699 172 -----YVAIF-ILTLF----SE--------F-------PALGK---H--------A-PK---------ADKPV-A----- 199 (394)
T ss_pred -----HHHHH-HHHHh----cC--------C-------ccccc---c--------C-cc---------ccCcc-c-----
Confidence 00000 00000 00 0 00000 0 0 00 00000 0
Q ss_pred CccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHh-hhcCC--cccchhhhhhhcccccccccccchhhhcc
Q 009176 324 GAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAE-SRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSR 400 (541)
Q Consensus 324 ~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~-slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~ 400 (541)
+. ..++.+|++.+.+++....-..+.+-+....+ ..|++ +....++++.+.+.+||+.+|.++|..
T Consensus 200 --~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-- 268 (394)
T PRK03699 200 --KE-------KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-- 268 (394)
T ss_pred --cc-------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 01 01356788777776654332233344566664 45775 456788899999999999999885532
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhH
Q 009176 401 SKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGS 479 (541)
Q Consensus 401 ~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs 479 (541)
+|...+.....+.++..+++....+ ..+.+...+.|++.|..++...+...|.. .++.+...|.+.....+|+
T Consensus 269 -----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~ 342 (394)
T PRK03699 269 -----DLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT-KVASPKLVNFILTCGTIGT 342 (394)
T ss_pred -----chhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCHHHHHHHHHhhhHHH
Confidence 2223333333333333333333333 34556678899999999999888888864 5677888999999989999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009176 480 FLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRK 535 (541)
Q Consensus 480 ~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~ 535 (541)
.++|.+.|+++|..+ ++.+|++.+++++++.++++.+.+-.||
T Consensus 343 ~i~p~~~G~l~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (394)
T PRK03699 343 MLTFVVTSPIVAHFG-------------LQAALLTANGLYAVVFVMCILLGFVSKH 385 (394)
T ss_pred HHHHHHHHHHHHHhC-------------chhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999754 6889999999999888887777655555
No 10
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.76 E-value=8e-17 Score=170.74 Aligned_cols=380 Identities=12% Similarity=-0.002 Sum_probs=242.7
Q ss_pred CCCCccchhHHHHHHHHHHHHhcCCc-cccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHH
Q 009176 1 MPLNSNILQWLSLVGAIWLQSINGTN-SNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLL 78 (541)
Q Consensus 1 ~~~~~~~~rw~~l~as~~v~~~~Gt~-Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vll 78 (541)
||.+...+ |. +.....+....... +.++...|++++.+|+|++|...+.....+|..+ .++.|.+.||+|+|.++.
T Consensus 1 ~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~ 78 (393)
T PRK09705 1 MPSKFPLN-FM-LLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVA 78 (393)
T ss_pred CCCccchH-HH-HHHHHHHHHHcchhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHH
Confidence 45554433 32 22245555444433 5588999999999999999999999999999866 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCCCCceehhhHHHhhhhHHHHHHHH
Q 009176 79 IGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPFDRQVAVGITSSYLGLSAKLYTSA 158 (541)
Q Consensus 79 iGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~RG~a~gllk~~~GLSaaift~i 158 (541)
+|.+...+|+...-.+ +.+|.+.+.-++.|.+.+..++.+....-+.||++||.+.|+.-....+++.+-..+
T Consensus 79 ~~~~l~~~~~~~~~~a-------~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~ 151 (393)
T PRK09705 79 ISLLLIAVGALMRELY-------PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAI 151 (393)
T ss_pred HHHHHHHHHHHHHHHC-------cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999998765431 235666677888899988776665554457899999999998766555555444433
Q ss_pred HHHHhcCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhccccc
Q 009176 159 VNAIETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSK 238 (541)
Q Consensus 159 ~~~~~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~ 238 (541)
...+. ++.. . ....+.. +.+.
T Consensus 152 ~~~l~----------------------------------~~~~-----~-------w~~~~~~------~~~~------- 172 (393)
T PRK09705 152 TPWLV----------------------------------QHSE-----T-------WYQTLAW------WALP------- 172 (393)
T ss_pred HHHHH----------------------------------HhcC-----C-------HHHHHHH------HHHH-------
Confidence 32211 0000 0 0000000 0000
Q ss_pred ccCCCCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCC
Q 009176 239 LKTLLPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDG 318 (541)
Q Consensus 239 ~~~~~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (541)
.+ +.+++..+ .. + + +++ + + +++.
T Consensus 173 ----------~~-~~~~~~~~----~~---~------~----~~~---------------~-~-----------~~~~-- 195 (393)
T PRK09705 173 ----------AV-VALFAWWW----QS---A------R----EVA---------------S-S-----------HKTT-- 195 (393)
T ss_pred ----------HH-HHHHHHHH----Hh---c------C----CCc---------------c-c-----------cCCC--
Confidence 00 00000000 00 0 0 000 0 0 0000
Q ss_pred ccCCCCccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchh
Q 009176 319 IYHGLGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGY 396 (541)
Q Consensus 319 ~~~~~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~ 396 (541)
.+.++.++++++|.+.+.+++....-....+-+.++.++.|.+ ++....++.++.+.+||+..|.+.|
T Consensus 196 ----------~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~ 265 (393)
T PRK09705 196 ----------TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMAR 265 (393)
T ss_pred ----------cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 0113456778889887766554333223444566666667775 4567899999999999999998855
Q ss_pred hhcccCCCCChhHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcC-CCcccchhhhhhhhh
Q 009176 397 FFSRSKHMIPSPASIGALMAPMAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFG-TKNFSVNHNIVVANI 475 (541)
Q Consensus 397 ~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG-~k~fg~nyg~~~~a~ 475 (541)
.. +|...+.....+.+++.+++....+....+...+.|+..|..++...+.+.|.++ .++-|+.+|++....
T Consensus 266 r~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 338 (393)
T PRK09705 266 HQ-------DRRKLLMLALVLQLVGFCGFIWLPLQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIG 338 (393)
T ss_pred hc-------cchHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Confidence 43 2222222233334444433322121111223356788999888888888888886 467799999999888
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009176 476 PIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTR 534 (541)
Q Consensus 476 ~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r 534 (541)
.+++.++|.++|++.|..+. |+..|++.+.+++++.++.+.+..+||
T Consensus 339 ~~~~~~gp~~~G~l~~~~g~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 339 FIIAGLAPWFSGVLRSISGN------------YLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred HHHHHHHHHHHHHHHHHhCC------------chHHHHHHHHHHHHHHHHHHHhccccc
Confidence 88999999999999999887 999999999999988777766654444
No 11
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.76 E-value=1.5e-17 Score=181.20 Aligned_cols=389 Identities=12% Similarity=0.035 Sum_probs=218.0
Q ss_pred hHHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhcccc-hhhhhhccccchHHHHHHHHHHHHHH
Q 009176 9 QWLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLFG-WISGVASVYLPLWLVLLIGSTLGLIG 87 (541)
Q Consensus 9 rw~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~Gll~d~~pp~~vlliGa~~~~~G 87 (541)
+|....+.+...+..-..|.++.+.|.+++.+|+|.+|...+.....+|..+| ++.|.+.||+|+|.++.+|.+...++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~ 114 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPA 114 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 34444444444444555677888888999999999999999988888888774 99999999999999999988887777
Q ss_pred HHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCC
Q 009176 88 YGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSS 166 (541)
Q Consensus 88 Y~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~ 166 (541)
....-. .. ++|++.+.-++.|.+.+.. ..+.....+.||+ +||++.|+..+...+.+++-..+...+.
T Consensus 115 ~~~~~~--~~-----s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~--- 183 (476)
T PLN00028 115 VFCMSL--VS-----SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVF--- 183 (476)
T ss_pred HHHHHH--hc-----CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 554322 21 3455555555666655422 1122222377875 7999999876655454443333221111
Q ss_pred CCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCch
Q 009176 167 PNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPV 246 (541)
Q Consensus 167 ~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~ 246 (541)
..+. . . .. . +...+...+.+..++. +
T Consensus 184 -------------------~~~~----~-~-~~-------~---~~~gWr~~f~i~g~l~---l---------------- 209 (476)
T PLN00028 184 -------------------PLIK----D-A-GA-------P---SFTAWRIAFFVPGLLH---I---------------- 209 (476)
T ss_pred -------------------HHHH----h-c-CC-------c---chhhhHHHHHHHHHHH---H----------------
Confidence 0000 0 0 00 0 0001111111100000 0
Q ss_pred hHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCcc
Q 009176 247 KNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAK 326 (541)
Q Consensus 247 ~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (541)
+..++.++.| ++ .++.+ . ++.++ +.+.++ .+
T Consensus 210 ---~~~l~~~~~~---------~~----------~p~~~--------~---~~~~~----------~~~~~~------~~ 240 (476)
T PLN00028 210 ---IMGILVLTLG---------QD----------LPDGN--------Y---RELKK----------SGTMPK------DS 240 (476)
T ss_pred ---HHHHHHHHHc---------Cc----------CCCCc--------h---hhHHh----------cCcccc------cc
Confidence 0000001111 00 00000 0 00000 000000 00
Q ss_pred ccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHh-hhcCC--cccchhhhhhhcccccccccccchhhhcccCC
Q 009176 327 EEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAE-SRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKH 403 (541)
Q Consensus 327 ~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~-slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~ 403 (541)
....+++.++++.+|++++.+++..+......+.+....+ ..|++ ++....++..+++.+||+++|+++|.+.||+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~ 320 (476)
T PLN00028 241 FSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFG 320 (476)
T ss_pred HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcC
Confidence 1123578899999999999887766665555555666544 45775 45678889999999999999999554433321
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHH----hhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhh
Q 009176 404 MIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGV----CSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIG 478 (541)
Q Consensus 404 ~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~----~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~G 478 (541)
...|.+.+.+.+++..+..+++....+ ....+..++.++ ++|..+++.| | ++.|+.|+++|++..+.
T Consensus 321 ~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~-~~~~~~g~~~g~~~~~g--- 392 (476)
T PLN00028 321 MRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVP----F-VSRRSLGVISGLTGAGG--- 392 (476)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCc----c-cChhhchhhhhhhhccc---
Confidence 123555544444444443333333333 222223334444 4555555444 4 36789999999986544
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 479 SFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 479 s~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
.+++.+++.++|.++.. =|+.+|++.+++.+++.++.++++
T Consensus 393 -~lg~~i~~~l~~~~~~~----------~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 393 -NVGAVLTQLLFFTGSSY----------STETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred -cHHHHHHHHHHHhcCCc----------cHhhHHHHHHHHHHHHHHHHHhee
Confidence 44555556666643310 099999999999999988888775
No 12
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.74 E-value=5.8e-17 Score=175.58 Aligned_cols=399 Identities=13% Similarity=0.015 Sum_probs=232.6
Q ss_pred CCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009176 24 GTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHL 102 (541)
Q Consensus 24 Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~ 102 (541)
-..+.++.-.|++++.+|+|.+|...+..+..++..+ .++.|.+.||+|+|.++.++.+...++-+.+-...... ..
T Consensus 43 ~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~--~~ 120 (467)
T PRK09556 43 LIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSG--SV 120 (467)
T ss_pred HHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcc--cc
Confidence 3456677888999999999999999999999999866 88999999999999998888777666655544433332 23
Q ss_pred hHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchh
Q 009176 103 SYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIF 181 (541)
Q Consensus 103 ~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~ 181 (541)
++|++.++-++.|.+++....++.....+.||+ +||++.|+.-...++.+++-..+..........++-...+.+.++.
T Consensus 121 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~ 200 (467)
T PRK09556 121 SLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSII 200 (467)
T ss_pred hHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHH
Confidence 578888888888988887666666666689986 6999999987777776665443332111000001111112222222
Q ss_pred hhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccc
Q 009176 182 PLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLV 261 (541)
Q Consensus 182 p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ 261 (541)
..++.++...++|.. |.+ .++
T Consensus 201 ~~~~~i~~~~~~~~~-p~~------------~~~---------------------------------------------- 221 (467)
T PRK09556 201 ALIIGFIGLRYGSDS-PEE------------LGW---------------------------------------------- 221 (467)
T ss_pred HHHHHHHHHHhCCCC-hhh------------cCC----------------------------------------------
Confidence 222222222222211 000 000
Q ss_pred cccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHH
Q 009176 262 IPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFW 341 (541)
Q Consensus 262 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fw 341 (541)
.++ ++...+ +..+ ++ ++.+.++ .. ..+.-.+++++++.+|
T Consensus 222 --------------~~~--~~~~~~---------~~~~---~~-------~~~~~~~----~~-~~~~~~~~~l~~~~~~ 261 (467)
T PRK09556 222 --------------GKA--EEIFGE---------PISE---ED-------KETESTD----MT-KWQIFVEYVLKNPVIW 261 (467)
T ss_pred --------------CCh--hhcccC---------ccch---hh-------hcccccc----Cc-HHHHHHHHHHcChHHH
Confidence 000 000000 0000 00 0000000 00 0111123589999999
Q ss_pred HHHHHHHHhhcccceeecchHHHH-hhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHH
Q 009176 342 LYFFVYFSGATLGLVFLNNLGQIA-ESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPM 418 (541)
Q Consensus 342 llf~~~~~g~g~Glm~I~n~g~i~-~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~ 418 (541)
.+++..++..+.-.....-+.... +..|++ ++....++..+.+.+|++.+|+++|...++ |...........
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r-----~~~~~~~~~~~~ 336 (467)
T PRK09556 262 LLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR-----RALVACIALALI 336 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----chHHHHHHHHHH
Confidence 999888776443322233344444 346775 455677788889999999999996643221 222211111111
Q ss_pred HHHHHHHhhcccc-hhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhh-hHHHHHHHHHHHhhhcCC-
Q 009176 419 AGAFMLLLNETNV-ALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPI-GSFLFGYLAALVYHKEGH- 495 (541)
Q Consensus 419 ~~~~ll~~~~~~~-~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~-Gs~l~~~laG~iyD~~~~- 495 (541)
....+++....+. .+++...++|++..+......+.+.|.+..++.|+-.|++.+...+ |+.+++.+.|+++|.+..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g 416 (467)
T PRK09556 337 IFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNG 416 (467)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccc
Confidence 1112222222232 3445566777543333334446777999999999999999877665 778889999999993211
Q ss_pred CCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 496 NAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 496 ~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
+.--+-+ ..=|+..|.+..++++++.++.+.+.
T Consensus 417 ~~~~~~~--~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 417 TPIFGYT--LTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred ccccccc--ccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000001 01199999999999999988888774
No 13
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.72 E-value=1.6e-16 Score=171.57 Aligned_cols=404 Identities=13% Similarity=0.042 Sum_probs=228.9
Q ss_pred chhHHHHHHHHHHHHhcC-CccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHH
Q 009176 7 ILQWLSLVGAIWLQSING-TNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLG 84 (541)
Q Consensus 7 ~~rw~~l~as~~v~~~~G-t~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~ 84 (541)
+.+|..+.+......... ..+.++..-|.+++. |+|++|...+....-++..+ .++.|.+.||+|++.++.+|.+..
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 25 RLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 345766554444333222 123467778889988 99999999999999999866 899999999999999999998888
Q ss_pred HHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 85 LIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 85 ~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
.++.....++-.. ..++|.+.+..++.|.+++.....+.....+.||+ .||++.|+.-...++.+++...+.....
T Consensus 104 ~i~~~~~~~~~~~---~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~ 180 (452)
T PRK11273 104 AAVMLFMGFVPWA---TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGM 180 (452)
T ss_pred HHHHHHHHhhhcc---cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 8777665544221 12356666666777777665544444444577876 5999999876666666555444322111
Q ss_pred cCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCC
Q 009176 164 TSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLL 243 (541)
Q Consensus 164 ~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~ 243 (541)
. . ..+-..-+.+.+....++.++...++|.. |++ ..
T Consensus 181 ~-~-~~gw~~~f~i~~~~~~~~~~l~~~~~~~~-~~~------~~----------------------------------- 216 (452)
T PRK11273 181 A-W-FNDWHAALYMPAFAAILVALFAFAMMRDT-PQS------CG----------------------------------- 216 (452)
T ss_pred H-H-hccHHHHHHHHHHHHHHHHHHHHHHccCC-Hhh------cC-----------------------------------
Confidence 0 0 00111111111111111112222121110 000 00
Q ss_pred CchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCC
Q 009176 244 PPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGL 323 (541)
Q Consensus 244 ~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (541)
..+++ +.+ ++ .+++.+ +++.++.
T Consensus 217 ------------------------------~~~~~--~~~-~~----------~~~~~~----------~~~~~~~---- 239 (452)
T PRK11273 217 ------------------------------LPPIE--EYK-ND----------YPDDYN----------EKHEQEL---- 239 (452)
T ss_pred ------------------------------CCChh--hhh-hc----------cccccc----------cccCCCc----
Confidence 00000 000 00 000000 0000000
Q ss_pred CccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhh-hcCC--cccchhhhhhhcccccccccccchhhhcc
Q 009176 324 GAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAES-RGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSR 400 (541)
Q Consensus 324 ~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~s-lg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~ 400 (541)
.. .|.-.+.+++++.+|.+++.+++....-....+.+....++ .|++ +++...++..+++.+|++++|+++|...+
T Consensus 240 ~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~ 318 (452)
T PRK11273 240 TA-KQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR 318 (452)
T ss_pred cH-HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 00 11112347889999999888766643222233445555554 5664 44556677888999999999999654322
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHhh--ccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhh
Q 009176 401 SKHMIPSPASIGALMAPMAGAFMLLLN--ETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPI 477 (541)
Q Consensus 401 ~~~~~~R~~~l~~~~~~~~~~~ll~~~--~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~ 477 (541)
+ +|.........+..++.+++.. ..+ ..+++...++|+...+........+.|.+..+..|+..|+......+
T Consensus 319 ~----r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~ 394 (452)
T PRK11273 319 G----NRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYL 394 (452)
T ss_pred C----CcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHH
Confidence 1 1222211112222222222221 112 22334445556654443444556788999999999999999877677
Q ss_pred hHHH-HHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009176 478 GSFL-FGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYART 533 (541)
Q Consensus 478 Gs~l-~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~ 533 (541)
|+.+ +|.+.|+++|..+ |+..|.+++++++++++...++.+.+
T Consensus 395 g~~~~g~~v~g~l~~~~g-------------~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (452)
T PRK11273 395 GGSVAASAIVGYTVDFFG-------------WDGGFMVMIGGSILAVILLIVVMIGE 438 (452)
T ss_pred HHHHhhhhhHHHHHHHhc-------------chHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7655 5899999999864 89999999999999988888664333
No 14
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.71 E-value=8.4e-16 Score=161.89 Aligned_cols=376 Identities=14% Similarity=0.043 Sum_probs=228.6
Q ss_pred chhHHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHH
Q 009176 7 ILQWLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGL 85 (541)
Q Consensus 7 ~~rw~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~ 85 (541)
+++...++.+..+...+ .....+.....+++++|.|.+|...+..+..++..+ .++.|.+.||+|+|.++.+|.+...
T Consensus 14 ~~~~~~l~~~~~~~~~~-~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~ 92 (399)
T PRK05122 14 TLRIVSIVMFTFISYLT-IGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCA 92 (399)
T ss_pred cHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHH
Confidence 44455555555554443 444556677789999999999999999999999966 8999999999999999999998888
Q ss_pred HHHHHHHHHh-hhccccchHHHHHHHHHHhccccccccceeeeeecccCC-CCCceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 86 IGYGLQYLFL-THTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFP-FDRQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 86 ~GY~~~~l~~-~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP-~~RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
+++....... .+.+....+|.+.+.-++.|.+++...+++.....+.+| ++||++.|+.-....++..+-..+...+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 172 (399)
T PRK05122 93 LSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLY 172 (399)
T ss_pred HHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 8777665543 332222346777778889999998877776555567776 47999988654433332222122211111
Q ss_pred cCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCC
Q 009176 164 TSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLL 243 (541)
Q Consensus 164 ~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~ 243 (541)
+ .. . +...+.+..+++
T Consensus 173 ~------------------------------~~----------g-------~~~~~~~~~~~~----------------- 188 (399)
T PRK05122 173 H------------------------------WG----------G-------LAGLGLLIMLLA----------------- 188 (399)
T ss_pred H------------------------------cc----------c-------HHHHHHHHHHHH-----------------
Confidence 0 00 0 000000000000
Q ss_pred CchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCC
Q 009176 244 PPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGL 323 (541)
Q Consensus 244 ~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (541)
++.+++.. + . ++.+. + + +++
T Consensus 189 --------~~~~~~~~---~-------------~----~~~~~------------~-~------------~~~------- 208 (399)
T PRK05122 189 --------LLGLLLAR---P-------------R----PAVPP------------V-K------------GER------- 208 (399)
T ss_pred --------HHHHHHHh---c-------------C----CCCCC------------C-C------------ccc-------
Confidence 00000000 0 0 00000 0 0 000
Q ss_pred CccccCCHHhhhhchhHHHHHHHHHHh-hcccceeecchHHHHhhhcCCcccchhhhhhhcccccccccccchhhhcccC
Q 009176 324 GAKEEIGAMLMLQRVDFWLYFFVYFSG-ATLGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLIPSLFGYFFSRSK 402 (541)
Q Consensus 324 ~~~~d~t~~q~l~~~~Fwllf~~~~~g-~g~Glm~I~n~g~i~~slg~~~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~ 402 (541)
.+.++.++ ++|.....+.+. .+.+. ....+....++.|.++.....+++.+....||+..|.+.|..
T Consensus 209 -----~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~---- 276 (399)
T PRK05122 209 -----LPFRRVLG--RVWPYGMGLALASIGFGT-IATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRL---- 276 (399)
T ss_pred -----hhHHHHHH--HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 01112222 123222111111 11111 111222223344555556677788888899999988874421
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHH
Q 009176 403 HMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFL 481 (541)
Q Consensus 403 ~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l 481 (541)
+|...+......++++.+++....+ ..+.+...+.|+++|..++.+.+.+.|.+..++.|+.+|++.+...+|..+
T Consensus 277 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 353 (399)
T PRK05122 277 ---GGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGI 353 (399)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2223333344445555555444444 345567788999999988888888999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009176 482 FGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRK 535 (541)
Q Consensus 482 ~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~ 535 (541)
++.+.|.+.|..+ |+.+|.+.++++++++++...+..|.+|
T Consensus 354 ~~~~~g~l~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (399)
T PRK05122 354 TGPLAGLVASWFG-------------YPSIFLAAALAALLGLALTWLLYRRAPR 394 (399)
T ss_pred HHHHHHHHHHHcC-------------HHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9889999998753 8999999999999988887766554443
No 15
>PRK03545 putative arabinose transporter; Provisional
Probab=99.69 E-value=1.7e-15 Score=159.73 Aligned_cols=369 Identities=14% Similarity=0.081 Sum_probs=227.8
Q ss_pred cchhHHHHHHHHHHHHhc-CCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHH
Q 009176 6 NILQWLSLVGAIWLQSIN-GTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTL 83 (541)
Q Consensus 6 ~~~rw~~l~as~~v~~~~-Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~ 83 (541)
+.+||..+..-.+.+... -..|.-...-|++++++|+|++|...+.....++..+ .++.|.+.||+++|.++.++.+.
T Consensus 4 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 83 (390)
T PRK03545 4 RKVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVL 83 (390)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 345676444444444333 2234444456899999999999999998888888865 78999999999999999999888
Q ss_pred HHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHH
Q 009176 84 GLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAI 162 (541)
Q Consensus 84 ~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~ 162 (541)
..++..+...+ .++|++.+.-++.|.+.+...+.+.....+.+|+ +||.+.|+.-...+++.++-..+...+
T Consensus 84 ~~~~~~~~~~~-------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l 156 (390)
T PRK03545 84 FIASHVLSALA-------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVI 156 (390)
T ss_pred HHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHH
Confidence 88886554332 2467777777777777765555444444577775 799999987665555544333222211
Q ss_pred hcCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCC
Q 009176 163 ETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTL 242 (541)
Q Consensus 163 ~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~ 242 (541)
. +.- +....+.+..++ ++
T Consensus 157 ~----------------------------------~~~-------------gw~~~f~~~~~~--~~------------- 174 (390)
T PRK03545 157 G----------------------------------QYL-------------GWRTTFLAIGGG--AL------------- 174 (390)
T ss_pred H----------------------------------HHh-------------cHHHHHHHHHHH--HH-------------
Confidence 1 000 000001000000 00
Q ss_pred CCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCC
Q 009176 243 LPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHG 322 (541)
Q Consensus 243 ~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (541)
++.+++... .| +. + + + ++ .
T Consensus 175 --------l~~~~~~~~--~~-------------------~~---~----------~-~-----------~~-~------ 193 (390)
T PRK03545 175 --------ITLLLLIKL--LP-------------------LL---P----------S-E-----------HS-G------ 193 (390)
T ss_pred --------HHHHHHHHh--CC-------------------CC---C----------C-C-----------Cc-c------
Confidence 000000000 00 00 0 0 0 00 0
Q ss_pred CCccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhh-hcCC--cccchhhhhhhcccccccccccchhhhc
Q 009176 323 LGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAES-RGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFS 399 (541)
Q Consensus 323 ~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~s-lg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~ 399 (541)
+..+.++.++++.+|..+...++......+..+.+.++.++ .|++ +.....+++++.+..|++..|.++|..
T Consensus 194 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~- 268 (390)
T PRK03545 194 ----SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH- 268 (390)
T ss_pred ----hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence 00124678999999987766655443333333334444444 5665 345677888899999999998875421
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHH-HHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhh
Q 009176 400 RSKHMIPSPASIGALMAPMAGAFM-LLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPI 477 (541)
Q Consensus 400 ~~~~~~~R~~~l~~~~~~~~~~~l-l~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~ 477 (541)
+|...+.. ..++..+.+ +.....+ ..+++...+.|++++.......+.+.|... ++.+...|+......+
T Consensus 269 ------~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~ 340 (390)
T PRK03545 269 ------PSGFLLIA-IALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNI 340 (390)
T ss_pred ------chhHHHHH-HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHH
Confidence 34333322 222333322 2233333 346667888899988877778888888865 6778888888777788
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 478 GSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 478 Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
|..+++.+.|.++|..+ ++.+|.+.+.+.++++++.....
T Consensus 341 g~~~G~~~~G~~~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 341 GIGAGALLGNQVSLHLG-------------LSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHhccC-------------hhHHHHHHHHHHHHHHHHHHHHc
Confidence 88889999999999865 79999999999988888876553
No 16
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.69 E-value=8.4e-16 Score=157.81 Aligned_cols=355 Identities=16% Similarity=0.083 Sum_probs=223.0
Q ss_pred CccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 009176 25 TNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLS 103 (541)
Q Consensus 25 t~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~ 103 (541)
....|+...|.+++++|+|.+|...+.....++..+ .++.|.+.||+++|.++.+|.+...++..+...+- +
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-------~ 82 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST-------S 82 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh-------h
Confidence 345677888999999999999999999999999966 89999999999999999999999888887766542 4
Q ss_pred HHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHH-HHHHHhcCCCCCcccchhhhhchh
Q 009176 104 YAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTS-AVNAIETSSPNKRAKLYLLFNSIF 181 (541)
Q Consensus 104 ~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~-i~~~~~~~~~~~d~~~fLllla~~ 181 (541)
+|++.+..++.|.+.+...+.......+.+|+ +||.+.|+.-....+.+.+-.. +...+.. ..+-.......+..
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 159 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE---LYSWHWVFIVPGII 159 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh---cCCchhHHHHHHHH
Confidence 68888888888888887777777667788987 6999999988888887777663 3322221 11111222222333
Q ss_pred hhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccc
Q 009176 182 PLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLV 261 (541)
Q Consensus 182 p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ 261 (541)
..++.++...+.|+. +.+ .+ .++
T Consensus 160 ~~~~~~~~~~~~~~~-~~~------~~-~~~------------------------------------------------- 182 (379)
T TIGR00881 160 AIIVSLICFLLLRDS-PQS------CG-LPP------------------------------------------------- 182 (379)
T ss_pred HHHHHHHHheeeCCC-ccc------cc-cCc-------------------------------------------------
Confidence 333333333222221 100 00 000
Q ss_pred cccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHH
Q 009176 262 IPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFW 341 (541)
Q Consensus 262 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fw 341 (541)
+ ++. ++ ++.+++++ ++++. ....+...+++++++.+|
T Consensus 183 ---------------~---~~~-~~-----------~~~~~~~~------~~~~~-------~~~~~~~~~~~~~~~~~~ 219 (379)
T TIGR00881 183 ---------------A---EEM-PN-----------EEPDGDAE------KKEEE-------LTKKQIFLQYVLLNKVLW 219 (379)
T ss_pred ---------------c---ccC-cc-----------cccccccc------ccccc-------ccchHHHHHHHHhcchHH
Confidence 0 000 00 00000000 00000 001223457889999999
Q ss_pred HHHHHHHHhhcccceeecchHHHH-hhhcCC--cccchhhhhhhcccccccccccchh-hhcccCCCCChhHHHHHHHHH
Q 009176 342 LYFFVYFSGATLGLVFLNNLGQIA-ESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGY-FFSRSKHMIPSPASIGALMAP 417 (541)
Q Consensus 342 llf~~~~~g~g~Glm~I~n~g~i~-~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~-~~~~~~~~~~R~~~l~~~~~~ 417 (541)
.+.+.+++....-........... +.+|++ +.....++..+.+.+||++.|.+.| .. ++ .|..........
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~-~~----~~~~~~~~~~~~ 294 (379)
T TIGR00881 220 YISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLF-NG----RRGPLAVFFMAL 294 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHc-CC----cchHHHHHHHHH
Confidence 998877665433222222333443 345765 3456778889999999999998855 32 11 122221112222
Q ss_pred HHHHHHHHhh--ccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcC
Q 009176 418 MAGAFMLLLN--ETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEG 494 (541)
Q Consensus 418 ~~~~~ll~~~--~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~ 494 (541)
...+.+.... ..+ ....+...+.|+..++.....++.++|.++.++-|+..|+..+...+|+.+++.+.|.+.|..+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 295 IIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG 374 (379)
T ss_pred HHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence 2222222222 112 2344455667776666677778899999999999999999999999999999999999999754
No 17
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.67 E-value=5.8e-16 Score=163.57 Aligned_cols=399 Identities=14% Similarity=0.026 Sum_probs=227.6
Q ss_pred cccchHHHHHHhCCC--------hhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009176 29 FPAYSSQLKQLLSLS--------QLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTI 99 (541)
Q Consensus 29 f~~ys~~lk~~l~~s--------q~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i 99 (541)
++..-+.++.+++++ +.|...+.....+|..+ .++.|.+.||+|+|.++.+|.+...+|....... ..
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--~~- 123 (481)
T TIGR00879 47 IGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLA--AF- 123 (481)
T ss_pred hhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHh--cc-
Confidence 444456677777777 99999999999999966 8999999999999999999999888876655332 21
Q ss_pred ccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHH-H-HHhcCCCCCcccchhh
Q 009176 100 SHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAV-N-AIETSSPNKRAKLYLL 176 (541)
Q Consensus 100 ~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~-~-~~~~~~~~~d~~~fLl 176 (541)
..++|.+.+..++.|.+.+...+.......+.+|+ +||.+.|+.-...++.+.+-..+. . .+.. +...-...+
T Consensus 124 -~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~---~~~~w~~~f 199 (481)
T TIGR00879 124 -ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLN---NTLGWRIPL 199 (481)
T ss_pred -ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCC---CCccHHHHH
Confidence 23457788888889998887777766666688875 799999998777777666665554 1 2210 011112222
Q ss_pred hhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHh
Q 009176 177 FNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICL 256 (541)
Q Consensus 177 lla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll 256 (541)
.+...+.++.++...+++.- |... .+++++..-.
T Consensus 200 ~~~~~~~~~~~~~~~~l~~~-~~~~-----~~~~~~~~~~---------------------------------------- 233 (481)
T TIGR00879 200 GLQLIPAGLLFLGLFFLPES-PRWL-----VGKGRVEEAR---------------------------------------- 233 (481)
T ss_pred HHHHHHHHHHHHHHhcCCCC-hHHH-----HHcCChHHHH----------------------------------------
Confidence 22333333333333333221 1000 0000000000
Q ss_pred hhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhh--
Q 009176 257 LAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLM-- 334 (541)
Q Consensus 257 ~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~-- 334 (541)
+..++. +..+ +.+++.....+..+ +... .+.+.++ ......++.
T Consensus 234 ----------------~~~~~~----~~~~-~~~~~~~~~~~~~~-~~~~-----~~~~~~~-------~~~~~~~~~~~ 279 (481)
T TIGR00879 234 ----------------KSLARL----RGTS-GEDKELLDELELID-IKRS-----IEKRSVQ-------PSWGSLFSSTR 279 (481)
T ss_pred ----------------HHHHHH----hCCC-CCcHHHHHHHHHHH-HHHH-----HHHhhcc-------ccHHHHHhcCc
Confidence 000000 0000 00000000000000 0000 0000000 000011111
Q ss_pred -hhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHH
Q 009176 335 -LQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASI 411 (541)
Q Consensus 335 -l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l 411 (541)
.+.+.+|..++.++..........+-...+.+..|++. .....++..+.+.+|++++|++.|.. +|...+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-------~~~~~~ 352 (481)
T TIGR00879 280 RIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-------GRRPLL 352 (481)
T ss_pred hhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cchHHH
Confidence 23444555555544432222223333445556677753 45677778888999999999885432 222333
Q ss_pred HHHHHHHHHHHHHHh---h--cc------cchhHHHHHHHHHhhhccc-hhhHHHhhhhcCCCcccchhhhhhhhhhhhH
Q 009176 412 GALMAPMAGAFMLLL---N--ET------NVALYTSTAIIGVCSGAIT-SISVTTTTELFGTKNFSVNHNIVVANIPIGS 479 (541)
Q Consensus 412 ~~~~~~~~~~~ll~~---~--~~------~~~l~~~s~liG~~yG~~~-~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs 479 (541)
...+++++++++++. . .. +........+.+.++|..+ ++..++++|.++.++.++..++......+|+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~ 432 (481)
T TIGR00879 353 LIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLAN 432 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHH
Confidence 333444444444333 1 11 1122333445555666544 5555677999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009176 480 FLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTR 534 (541)
Q Consensus 480 ~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r 534 (541)
.+++.++|.++|..+ ++..|.+.+++++++.++.+++..++|
T Consensus 433 ~i~~~~~~~~~~~~~-------------~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 433 FIVGFLFPTMLESIG-------------VGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHHHHHhcC-------------ccceehhHHHHHHHHHHHHheecccCC
Confidence 999999999999743 688999999999999888877655554
No 18
>TIGR00895 2A0115 benzoate transport.
Probab=99.67 E-value=5.1e-16 Score=160.76 Aligned_cols=379 Identities=15% Similarity=0.058 Sum_probs=227.3
Q ss_pred cchhHHHHHHHHHHHHhcCC-ccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHH
Q 009176 6 NILQWLSLVGAIWLQSINGT-NSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTL 83 (541)
Q Consensus 6 ~~~rw~~l~as~~v~~~~Gt-~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~ 83 (541)
++.+|..+..+.+.....|. .+.++.+.|.+++.+|+|..|...+.....++..+ .++.|.+.||++++.++.+|.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 45567777777766665553 56778899999999999999999999888888866 78999999999999999999988
Q ss_pred HHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHH
Q 009176 84 GLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAI 162 (541)
Q Consensus 84 ~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~ 162 (541)
..+++...... .++|.+.+..++.|.+.+...++......+.+|+ +||++.|+.-....+++.+-..+...+
T Consensus 92 ~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 92 FSVFTLLCALA-------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred HHHHHHHHHHc-------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence 88887766542 2457777778888888887776666666688986 699999998888888877776666555
Q ss_pred hcCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCC
Q 009176 163 ETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTL 242 (541)
Q Consensus 163 ~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~ 242 (541)
.+ ..+-.....+.+..+.+..++...+++.. +... .+++++..
T Consensus 165 ~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~---------------------------- 207 (398)
T TIGR00895 165 IP---VFGWRSLFYVGGIAPLLLLLLLMRFLPES-IDFL-----VSKRPETV---------------------------- 207 (398)
T ss_pred hh---cccceeehhhhhhHHHHHHHHHHHhCCCC-ChHH-----HhcCHHHH----------------------------
Confidence 41 11112222222233333323222222211 0000 00000000
Q ss_pred CCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCC
Q 009176 243 LPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHG 322 (541)
Q Consensus 243 ~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (541)
++ ..++. .++..+ +.+ ++.+ ++.+.++
T Consensus 208 --------------------------~~---~~~~~--~~~~~~------------~~~--~~~~----~~~~~~~---- 234 (398)
T TIGR00895 208 --------------------------RR---IVNAI--APQMQA------------EAQ--SALP----EQKATQG---- 234 (398)
T ss_pred --------------------------HH---HHHHH--HHhccc------------ccc--cccc----ccccccc----
Confidence 00 00000 000000 000 0000 0000000
Q ss_pred CCccccC-CHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhc
Q 009176 323 LGAKEEI-GAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFS 399 (541)
Q Consensus 323 ~~~~~d~-t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~ 399 (541)
..++.. ..++-.+.+.+|.+++.+++.........+.+..+.+..|++ +.....++.++...+|++.+|.+.|..
T Consensus 235 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 312 (398)
T TIGR00895 235 -TKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL- 312 (398)
T ss_pred -hhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-
Confidence 000000 011111223455555555443322222222334455566765 345678888889999999998885432
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhh
Q 009176 400 RSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIG 478 (541)
Q Consensus 400 ~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~G 478 (541)
+|...+...........++.....+ ..+++..++.|+++|..++...+.++|.++.++-|+.+|++.....+|
T Consensus 313 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 386 (398)
T TIGR00895 313 ------GPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLG 386 (398)
T ss_pred ------chHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHH
Confidence 2222222222222222222221223 456778889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 009176 479 SFLFGYLAALV 489 (541)
Q Consensus 479 s~l~~~laG~i 489 (541)
..++|.++|++
T Consensus 387 ~~~g~~~~G~l 397 (398)
T TIGR00895 387 AIIGPILAGYL 397 (398)
T ss_pred HHHHHHhHHhc
Confidence 99999999875
No 19
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.65 E-value=3.1e-15 Score=155.78 Aligned_cols=383 Identities=14% Similarity=0.100 Sum_probs=226.6
Q ss_pred cchhHHHHHHHHHHHHhcC-CccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHH
Q 009176 6 NILQWLSLVGAIWLQSING-TNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTL 83 (541)
Q Consensus 6 ~~~rw~~l~as~~v~~~~G-t~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~ 83 (541)
++++|..+.+........+ ..+.++...|++++.+|+|++|...+.....++..+ +++.|.+.||+|+|.++.++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 4566766655555544444 445577888999999999999999999999999866 89999999999999999999888
Q ss_pred HHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHH
Q 009176 84 GLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAI 162 (541)
Q Consensus 84 ~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~ 162 (541)
..++......+ .++|.+.+..++.|.+.+....++.....+.+|+ +||.+.|+.-...+++..+-..+...+
T Consensus 87 ~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l 159 (405)
T TIGR00891 87 FSAGTLACGFA-------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV 159 (405)
T ss_pred HHHHHHHHHHh-------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87876655431 2568888888899998887777766666788886 699999998888888877777666555
Q ss_pred hcCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCC
Q 009176 163 ETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTL 242 (541)
Q Consensus 163 ~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~ 242 (541)
... .++.-.....++..+.++.++.. +.. |++++ .+++++.
T Consensus 160 ~~~--~~~~w~~~f~~~~~~~~~~~~~~---~~~-~~~~~----~~~~~~~----------------------------- 200 (405)
T TIGR00891 160 VPV--WGDGWRALFFISILPIIFALWLR---KNI-PEAED----WKEKHAG----------------------------- 200 (405)
T ss_pred HHh--cCccHHHHHHHHHHHHHHHHHHH---HhC-CCChh----HHHHhhh-----------------------------
Confidence 410 01111122223333333222211 111 11100 0000000
Q ss_pred CCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCC
Q 009176 243 LPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHG 322 (541)
Q Consensus 243 ~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (541)
.++. ++...+..+.++ .. ++...+.
T Consensus 201 --------------------------------~~~~------------~~~~~~~~~~~~---~~----~~~~~~~---- 225 (405)
T TIGR00891 201 --------------------------------KALV------------RTMVDILYGGEH---RI----ANIVMTL---- 225 (405)
T ss_pred --------------------------------hhhh------------hhHHHHHhccch---hh----hhhhhhh----
Confidence 0000 000000000000 00 0000000
Q ss_pred CCccccCCHHhhhhchhHHH----HHHHHHHhhcccceeecchHHHH-hhhcCC--cccchhhhhhhcccccccccccch
Q 009176 323 LGAKEEIGAMLMLQRVDFWL----YFFVYFSGATLGLVFLNNLGQIA-ESRGCS--GTSSLVSLSSSFGFFGRLIPSLFG 395 (541)
Q Consensus 323 ~~~~~d~t~~q~l~~~~Fwl----lf~~~~~g~g~Glm~I~n~g~i~-~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s 395 (541)
. ...++ +....|. +.+.+.+.........+...... +.+|.+ +.....++..+...+|++..|.+.
T Consensus 226 ---~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~ 298 (405)
T TIGR00891 226 ---A--AAMVQ--SAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLG 298 (405)
T ss_pred ---h--HHhhh--hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00001 0112222 22221111111111122233333 345665 345677888899999999999885
Q ss_pred hhhcccCCCCChhHHHHHHHHHHHH-HHHHHhhcccc-hhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhh
Q 009176 396 YFFSRSKHMIPSPASIGALMAPMAG-AFMLLLNETNV-ALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVA 473 (541)
Q Consensus 396 ~~~~~~~~~~~R~~~l~~~~~~~~~-~~ll~~~~~~~-~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~ 473 (541)
|.. +|...+....+.... ...++....+. .+.+...+.|++.++.+++.|+.+.|.++.++-|+..|+...
T Consensus 299 dr~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 371 (405)
T TIGR00891 299 DWL-------GRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQ 371 (405)
T ss_pred HHh-------CchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHH
Confidence 432 222222222222211 12222222232 344455778888899999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHH
Q 009176 474 NIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILW 515 (541)
Q Consensus 474 a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~ 515 (541)
...+|+.++|.++|.++|+.++ |+.+|..+
T Consensus 372 ~~~~g~~~g~~~~g~l~~~~g~------------~~~~~~~~ 401 (405)
T TIGR00891 372 LGNLGGALAPIIGALLAQRLDE------------YGTALASL 401 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhccc------------cchhHHhh
Confidence 8899999999999999999887 77777664
No 20
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.63 E-value=2.6e-15 Score=160.42 Aligned_cols=378 Identities=15% Similarity=0.053 Sum_probs=221.6
Q ss_pred CccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 009176 25 TNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLS 103 (541)
Q Consensus 25 t~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~ 103 (541)
..+..+.-.|.+++.+|+|.+|...+..+..+|..+ .++.|.+.||+|+|.++.++.+...++.....++ . +
T Consensus 23 d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--~-----~ 95 (412)
T TIGR02332 23 DRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFA--T-----G 95 (412)
T ss_pred hhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh--c-----C
Confidence 345566678899999999999999999999999866 7999999999999999999988888888776432 2 2
Q ss_pred HHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCC---CCcccchhhhhc
Q 009176 104 YAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSP---NKRAKLYLLFNS 179 (541)
Q Consensus 104 ~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~---~~d~~~fLllla 179 (541)
+|.+.+.-++.|.+++...++......+.||+ +||++.|+.....+++..+-..+...+..... ..+-..-....+
T Consensus 96 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~ 175 (412)
T TIGR02332 96 PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEG 175 (412)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHH
Confidence 46667777788888876555554444577886 69999999998888877766555544431000 001111111122
Q ss_pred hhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhc
Q 009176 180 IFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAP 259 (541)
Q Consensus 180 ~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~P 259 (541)
+...++.++...++|.- |.+ .+.. +
T Consensus 176 ~~~l~~~~~~~~~~~~~-p~~------------~~~l------------------------------------------~ 200 (412)
T TIGR02332 176 FPSVILGVMTWFWLDDS-PDK------------AKWL------------------------------------------D 200 (412)
T ss_pred HHHHHHHHHHhhccCCC-ccc------------CCCC------------------------------------------C
Confidence 22222222222222211 100 0000 0
Q ss_pred cccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchh
Q 009176 260 LVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVD 339 (541)
Q Consensus 260 l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~ 339 (541)
+ + +++... .+.+.++ .+.++ ++ ++.+.++ . .....+++ ++++.
T Consensus 201 ------~--~---~~~~~~---~~~~~~~------~~~~~--~~--------~~~~~~~-----~-~~~~~~~~-~~~~~ 243 (412)
T TIGR02332 201 ------E--E---DKKALK---EMIDNDQ------LTLEQ--PE--------GAFAHAA-----M-PQRSMLRE-IFTPA 243 (412)
T ss_pred ------H--H---HHHHHH---HHHHhcc------ccccc--cc--------ccccccc-----c-cHHHHHHH-hcChH
Confidence 0 0 000000 0000000 00000 00 0000000 0 00012333 44688
Q ss_pred HHHHHHHHHHhhcccceeecchHHHHhhh--cCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHH
Q 009176 340 FWLYFFVYFSGATLGLVFLNNLGQIAESR--GCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALM 415 (541)
Q Consensus 340 Fwllf~~~~~g~g~Glm~I~n~g~i~~sl--g~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~ 415 (541)
+|...+++++..+.=-.....+.++.++. |++ ++....++..+++.+||+..|+++|...+ |...+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~------r~~~~~~~~ 317 (412)
T TIGR02332 244 IMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKE------RKHHTALPY 317 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCc------cHHHHHHHH
Confidence 99998888776543223445677777765 443 34566788889999999999998554311 222222222
Q ss_pred HHHHHHHHHHhhcccchhHH-HHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcC
Q 009176 416 APMAGAFMLLLNETNVALYT-STAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEG 494 (541)
Q Consensus 416 ~~~~~~~ll~~~~~~~~l~~-~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~ 494 (541)
+.+.++.++.....+....+ +..+.+++.....++......|.|+.|+.++.+|+.+....+|+.++|.+.|.+.|..+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 318 LFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG 397 (412)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC
Confidence 33333332222222222222 22222333333334455666789999999999999999999999999999999999988
Q ss_pred CCCCCCccccccccHHHHHHHHHHH
Q 009176 495 HNAHNGKCMGMACYRSTFILWGSFC 519 (541)
Q Consensus 495 ~~~~~~~C~G~~CY~~tF~i~~~~~ 519 (541)
+ |+.+|.+.++..
T Consensus 398 ~------------~~~~~~~~~~~~ 410 (412)
T TIGR02332 398 S------------FNSGLWFVAALL 410 (412)
T ss_pred C------------CchhHHHHHHHH
Confidence 8 999998776643
No 21
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.63 E-value=5.8e-15 Score=156.66 Aligned_cols=360 Identities=13% Similarity=0.080 Sum_probs=218.6
Q ss_pred hhHHHHHHHHHHHHhcCCcc-ccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHH
Q 009176 8 LQWLSLVGAIWLQSINGTNS-NFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGL 85 (541)
Q Consensus 8 ~rw~~l~as~~v~~~~Gt~Y-~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~ 85 (541)
.||..+..+.......+..+ ..+...|.+++.+|+|..|...+.....+|..+ +++.|.+.||+|+|.++.+|.+...
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~ 94 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 44555555555555555433 445566888999999999999999999999866 8999999999999999999999999
Q ss_pred HHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhc
Q 009176 86 IGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIET 164 (541)
Q Consensus 86 ~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~ 164 (541)
++....-.+ + ++|.+.++-++.|.+.+...++......+.||+ +||++.|+.....+++..+-..+...+..
T Consensus 95 ~~~~~~~~~--~-----~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~ 167 (426)
T PRK12307 95 VGTGLSGLA--S-----GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE 167 (426)
T ss_pred HHHHHHHHH--h-----HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence 988764442 1 357777778888888876666666666788987 59999999888888777765555433320
Q ss_pred CCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCC
Q 009176 165 SSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLP 244 (541)
Q Consensus 165 ~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~ 244 (541)
.-.-...++++..+.++.+ +++.. .
T Consensus 168 ----~~~w~~~f~i~~~~~~~~~----~~~~~-~---------------------------------------------- 192 (426)
T PRK12307 168 ----AYGWRAAFFVGLLPVLLVI----YIRAR-A---------------------------------------------- 192 (426)
T ss_pred ----cCCHHHHHHHHHHHHHHHH----HHHHH-C----------------------------------------------
Confidence 0000001111111111000 00000 0
Q ss_pred chhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCC
Q 009176 245 PVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLG 324 (541)
Q Consensus 245 ~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (541)
| ++ .++.++ +. + +++++ ++...
T Consensus 193 ------------------p------~~-~~~~~~----~~-~------------~~~~~--------~~~~~-------- 214 (426)
T PRK12307 193 ------------------P------ES-KEWEEA----KL-S------------GKGKH--------SQSAW-------- 214 (426)
T ss_pred ------------------C------CC-hHHHHh----hh-h------------ccccc--------cccch--------
Confidence 0 00 000000 00 0 00000 00000
Q ss_pred ccccCCHHhhhhchhHHHHHHHHHHh---hcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhc
Q 009176 325 AKEEIGAMLMLQRVDFWLYFFVYFSG---ATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFS 399 (541)
Q Consensus 325 ~~~d~t~~q~l~~~~Fwllf~~~~~g---~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~ 399 (541)
+....+.+++++++.+|.....+.+. .+....+.+.+....++.|++ ......++..+.+.+||+..|.+.|..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~- 293 (426)
T PRK12307 215 SVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI- 293 (426)
T ss_pred hhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 00112467889999998755433221 122112334455566666765 345667788888999999999884432
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHhh-cccchhHHHHHHHHHhh--hccchhhHHHhhhhcCCCcccchhhhhhhhhh
Q 009176 400 RSKHMIPSPASIGALMAPMAGAFMLLLN-ETNVALYTSTAIIGVCS--GAITSISVTTTTELFGTKNFSVNHNIVVANIP 476 (541)
Q Consensus 400 ~~~~~~~R~~~l~~~~~~~~~~~ll~~~-~~~~~l~~~s~liG~~y--G~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~ 476 (541)
+|...+....++..+..+++.. ..+....+..++.|+.+ .+..++.|+++.|.|+.++.|+..|+......
T Consensus 294 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 367 (426)
T PRK12307 294 ------GLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAA 367 (426)
T ss_pred ------ccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHh
Confidence 3333333333333333332222 22222333444555543 34567899999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhcC
Q 009176 477 IGSFLFGYLAALVYHKEG 494 (541)
Q Consensus 477 ~Gs~l~~~laG~iyD~~~ 494 (541)
+|+.++|.+.|++.|.-+
T Consensus 368 ~~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 368 TSGTFNSMAATWLGITMG 385 (426)
T ss_pred HHHHHHHHHHHHHHHccc
Confidence 999999999999998764
No 22
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.63 E-value=6.7e-15 Score=158.11 Aligned_cols=404 Identities=14% Similarity=0.082 Sum_probs=228.8
Q ss_pred hhHHHHHHHHHHHHhcC-CccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHH
Q 009176 8 LQWLSLVGAIWLQSING-TNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGL 85 (541)
Q Consensus 8 ~rw~~l~as~~v~~~~G-t~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~ 85 (541)
.||..+.+......... ....|+...|.+++ +|+|++|...+..+..+|..+ .++.|.+.||++++.++.+|.+...
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~ 102 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHH
Confidence 46777666655544333 34556677888887 599999999999999998866 7999999999999999999988888
Q ss_pred HHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhc
Q 009176 86 IGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIET 164 (541)
Q Consensus 86 ~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~ 164 (541)
+++...... ... ..++|.+++..++.|.++.....+......+.||+ +||++.|+.-...++++.+...+......
T Consensus 103 ~~~~~~~~~--~~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~ 179 (438)
T TIGR00712 103 AVMLLMGFV--PWA-TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA 179 (438)
T ss_pred HHHHHHhcc--ccc-cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHH
Confidence 887765433 111 12456777766677766554433333344577975 79999999777777776665554433220
Q ss_pred CCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCC
Q 009176 165 SSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLP 244 (541)
Q Consensus 165 ~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~ 244 (541)
.. .+-...|++ .+....+..++...++|.. |++ .+. +
T Consensus 180 ~~-~~w~~~f~~-~~~~~~i~~~~~~~~~~~~-~~~------~~~-~--------------------------------- 216 (438)
T TIGR00712 180 WF-NDWHAALYF-PAICAIIVALFAFAMMRDT-PQS------CGL-P--------------------------------- 216 (438)
T ss_pred Hh-hhhHHHHHH-HHHHHHHHHHHHHHhccCC-HHh------cCC-C---------------------------------
Confidence 00 001111111 1111111112222222111 000 000 0
Q ss_pred chhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCC
Q 009176 245 PVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLG 324 (541)
Q Consensus 245 ~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (541)
+. + +.++ +.+++. .++++++ .+
T Consensus 217 -------------------------------~~---~-~~~~---------~~~~~~----------~~~~~~~----~~ 238 (438)
T TIGR00712 217 -------------------------------PI---E-EYRN---------DYPDDY----------NEKAEQE----LT 238 (438)
T ss_pred -------------------------------Cc---h-hccc---------cccccc----------ccccccc----cc
Confidence 00 0 0000 000000 0000000 00
Q ss_pred ccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhh-hcCC--cccchhhhhhhcccccccccccc-hhhhcc
Q 009176 325 AKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAES-RGCS--GTSSLVSLSSSFGFFGRLIPSLF-GYFFSR 400 (541)
Q Consensus 325 ~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~s-lg~~--~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~ 400 (541)
.++...++.++++.||.+.+..++....-......+.+..++ .|++ ++....+++++.+.+|++.+|++ |++. +
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~-~ 316 (438)
T TIGR00712 239 -AKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVF-K 316 (438)
T ss_pred -hHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-c
Confidence 011112357899999999776655432222233455566654 4665 34566778888999999999988 4442 1
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHhhc-c-c-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhh
Q 009176 401 SKHMIPSPASIGALMAPMAGAFMLLLNE-T-N-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPI 477 (541)
Q Consensus 401 ~~~~~~R~~~l~~~~~~~~~~~ll~~~~-~-~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~ 477 (541)
+ .|............++.+++... . + ...++....+|+...+.....-..+.|.++.|+.|+..|+.....-+
T Consensus 317 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 392 (438)
T TIGR00712 317 G----NRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYL 392 (438)
T ss_pred C----cccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHh
Confidence 1 12221111111112222222211 1 1 22233333444432222222234678999999999999999877666
Q ss_pred hH-HHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009176 478 GS-FLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRK 535 (541)
Q Consensus 478 Gs-~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~ 535 (541)
|+ .++|.+.|.+.|..+ |+.+|++.++.++++.++.+++....||
T Consensus 393 gg~~~gp~l~G~l~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 393 GGSVAASAIVGYTVDFFG-------------WDGGFMVMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred hhhhhcchhHHHHHHhcc-------------chHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 65 567999999999653 8999999999999999998888766554
No 23
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.62 E-value=1.6e-14 Score=149.98 Aligned_cols=331 Identities=14% Similarity=0.058 Sum_probs=209.3
Q ss_pred cccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHH
Q 009176 27 SNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYA 105 (541)
Q Consensus 27 Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w 105 (541)
..++..-|++++.+|+|.+|...+.....+|..+ +++.|.+.||+++|.++.+|.+...++.... .. .+.|
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~-----~~~~ 88 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR---SA-----PGTA 88 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH---Hh-----ccHH
Confidence 4567888999999999999999999999999966 8999999999999999999988877776543 11 2346
Q ss_pred HHHHHHHHhccccccccceeeeeecccCCCCCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHh
Q 009176 106 HIFLLTVLAGNSICWINTVCYVVTIKNFPFDRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLA 185 (541)
Q Consensus 106 ~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v 185 (541)
.+.+..++.|.+.+..+++.-....+.||++||.+.|+.-...++...+-..+...+.+ ...
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~-----~~~------------- 150 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQ-----HSG------------- 150 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhh-------------
Confidence 66666777788777655554444457889999999998777666666554444332220 000
Q ss_pred HhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccccccc
Q 009176 186 CVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPLG 265 (541)
Q Consensus 186 ~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~~ 265 (541)
. +....+.... .. ..+..++..| ..
T Consensus 151 ---------------------~------~w~~~f~~~~---~~---------------------~~~~~~~~~~----~~ 175 (355)
T TIGR00896 151 ---------------------G------HWQQALAWWA---LP---------------------ALLALLAWIP----QV 175 (355)
T ss_pred ---------------------h------hHHHHHHHHH---HH---------------------HHHHHHHHhh----hh
Confidence 0 0000000000 00 0000000111 00
Q ss_pred cchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHHH
Q 009176 266 EKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYFF 345 (541)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf~ 345 (541)
+ ++ + + + +++. ++.+.++++|++.+|.+.+
T Consensus 176 ---~------------~~--~------------~-~-----------~~~~----------~~~~~~~~~~~~~~~~~~~ 204 (355)
T TIGR00896 176 ---R------------RR--V------------A-A-----------NQTT----------TRLTPVRIWRSPLAWQVTV 204 (355)
T ss_pred ---c------------cc--c------------C-C-----------CCCC----------CCCCCchhhcCHhHHHHHH
Confidence 0 00 0 0 0 0000 0112356788899998877
Q ss_pred HHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHH
Q 009176 346 VYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFM 423 (541)
Q Consensus 346 ~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~l 423 (541)
.+++....-......+.+..++.|.+ +.....++..+...+||+..|.+.|.. + +|...+.+..++++++.+
T Consensus 205 ~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~-~-----~~~~~~~~~~~~~~~~~~ 278 (355)
T TIGR00896 205 FFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRV-K-----DQRGIVAVLAVLQLVGLC 278 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhh-c-----cchHHHHHHHHHHHHHHH
Confidence 66554333333444566667777775 356788889999999999999884422 1 233333333344444444
Q ss_pred HHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCC-CcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCC
Q 009176 424 LLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGT-KNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGH 495 (541)
Q Consensus 424 l~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~-k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~ 495 (541)
.+....+....+..++.|+++|..+++..+.+.+.+.. ++.++.+|++.....+|..++|.+.|+++|..++
T Consensus 279 ~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 279 GLLFAPMHGLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred HHHHhhhhHHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33333322233356788999999999988888877665 5568888988877778888899999999998876
No 24
>PRK12382 putative transporter; Provisional
Probab=99.60 E-value=5e-14 Score=148.21 Aligned_cols=349 Identities=10% Similarity=0.010 Sum_probs=203.7
Q ss_pred cccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHH-HHHhhhccccchHHH
Q 009176 29 FPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQ-YLFLTHTISHLSYAH 106 (541)
Q Consensus 29 f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~-~l~~~~~i~~~~~w~ 106 (541)
.+.-+..+++++|+|.+|...+-.+..++..+ .++.|.+.||+++|.++.+|.+...++.... +..........++|.
T Consensus 35 ~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (392)
T PRK12382 35 LPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFAL 114 (392)
T ss_pred hhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHH
Confidence 34444568999999999999999999999866 8999999999999999999887766553221 111111111235677
Q ss_pred HHHHHHHhccccccccceeeeeecccCC-CCCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHh
Q 009176 107 IFLLTVLAGNSICWINTVCYVVTIKNFP-FDRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLA 185 (541)
Q Consensus 107 l~~~~~l~g~g~~~~nTa~lvt~v~NFP-~~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v 185 (541)
+.+.-++.|.+.+...+++.....+.+| ++||++.|+.-....++..+-..+...+. +.
T Consensus 115 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~------~~-------------- 174 (392)
T PRK12382 115 LVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH------SH-------------- 174 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH------hc--------------
Confidence 7777788888888776666555557776 57999998743322222222221111111 00
Q ss_pred HhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccccccc
Q 009176 186 CVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPLG 265 (541)
Q Consensus 186 ~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~~ 265 (541)
. ++...+.+..++ .++.++..+ +.
T Consensus 175 ----------~-----------------g~~~~~~~~~~~-------------------------~~~~~~~~~---~~- 198 (392)
T PRK12382 175 ----------F-----------------GFAALALTTMVL-------------------------PLLAWAFNG---TV- 198 (392)
T ss_pred ----------c-----------------ChHHHHHHHHHH-------------------------HHHHHHHHH---hc-
Confidence 0 010000000000 000000000 00
Q ss_pred cchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHHH
Q 009176 266 EKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYFF 345 (541)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf~ 345 (541)
+ + . + ++ +++++ +.++.++ .+|...+
T Consensus 199 ---~-----------~--~---~------------~~----------~~~~~------------~~~~~~~--~~~~~~~ 223 (392)
T PRK12382 199 ---R-----------K--V---P------------AH----------AGERP------------SLWSVVG--LIWKPGL 223 (392)
T ss_pred ---c-----------C--C---C------------CC----------cccCc------------hHHHHHH--HHHHhHH
Confidence 0 0 0 0 00 00000 0111111 2222211
Q ss_pred HHHHhhcccceeecc-hHHHHhhhcCCcccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHH
Q 009176 346 VYFSGATLGLVFLNN-LGQIAESRGCSGTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFML 424 (541)
Q Consensus 346 ~~~~g~g~Glm~I~n-~g~i~~slg~~~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll 424 (541)
...+ .+.+...+.. .....++.+.++.....+..++.+..|++..|.+.|... +|.. +.....++.++.++
T Consensus 224 ~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g------~~~~-~~~~~~~~~~~~~~ 295 (392)
T PRK12382 224 GLAL-QGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFG------GVKV-AIVSLLVETVGLLL 295 (392)
T ss_pred HHHH-HHHHHhHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcC------CCee-hHHHHHHHHHHHHH
Confidence 1111 1111111211 123334445555555666677778889999887743221 2222 22233444445444
Q ss_pred Hhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccc
Q 009176 425 LLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCM 503 (541)
Q Consensus 425 ~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~ 503 (541)
+....+ ..+++..++.|+++|..++..++.+.|.++.|+.|+.+|+..+...+|..+++.++|.+.|..+
T Consensus 296 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g--------- 366 (392)
T PRK12382 296 LWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG--------- 366 (392)
T ss_pred HHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------
Confidence 444433 3455677889999999888899999999999999999999999999999999999999999754
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 504 GMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 504 G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
|+..|.+.+++.+++.++.+..
T Consensus 367 ----~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 367 ----YPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred ----chHHHHHHHHHHHHHHHHHHhh
Confidence 8999999999888888776644
No 25
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.60 E-value=4.1e-14 Score=150.73 Aligned_cols=390 Identities=13% Similarity=0.042 Sum_probs=216.4
Q ss_pred CCCccchhHHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHH
Q 009176 2 PLNSNILQWLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIG 80 (541)
Q Consensus 2 ~~~~~~~rw~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliG 80 (541)
.+..+++-|...++-.....+.| ..++..+..+++++|+|++|...+-....++..+ .++.|.+.||+++|.++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~ 82 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWS--SWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWI 82 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 34445666777665555555444 3577888889999999999999998888888855 99999999999999988876
Q ss_pred HHHHHHHHHHHHH-HhhhccccchHHHHHH-HHHHhccccccccceeeeeecccCCCCCceehhhHHHhhhhHHHHHHHH
Q 009176 81 STLGLIGYGLQYL-FLTHTISHLSYAHIFL-LTVLAGNSICWINTVCYVVTIKNFPFDRQVAVGITSSYLGLSAKLYTSA 158 (541)
Q Consensus 81 a~~~~~GY~~~~l-~~~~~i~~~~~w~l~~-~~~l~g~g~~~~nTa~lvt~v~NFP~~RG~a~gllk~~~GLSaaift~i 158 (541)
.....++...... ...... ....+..++ ..++.|.+.... ...+..-..+++++||.+.|.......++.++-..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 160 (420)
T PRK09528 83 ISGLLVLFGPFFIYVFAPLL-QYNILLGAIVGGIYLGFGFLAG-AGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFI 160 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhccc-hhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHH
Confidence 6555544332211 111110 011222111 111112111100 011111124567788888888887777777776655
Q ss_pred HHHHhcCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhccccc
Q 009176 159 VNAIETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSK 238 (541)
Q Consensus 159 ~~~~~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~ 238 (541)
...+.. .+....| .+..+..+++++...++++. +++
T Consensus 161 ~g~l~~---~~~~~~f--~~~~~~~~~~~~~~~~~~~~-~~~-------------------------------------- 196 (420)
T PRK09528 161 AGILFN---INPQINF--WLGSGSALILLVLLFFAKPD-APS-------------------------------------- 196 (420)
T ss_pred HHHHHh---cCchHhH--HHHHHHHHHHHHHHhccccc-ccc--------------------------------------
Confidence 444431 0111111 11111111111111111110 000
Q ss_pred ccCCCCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCC
Q 009176 239 LKTLLPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDG 318 (541)
Q Consensus 239 ~~~~~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (541)
+ ++. + ++++ ++++.
T Consensus 197 --------------------------------------~----~~~-----------~--~~~~---------~~~~~-- 210 (420)
T PRK09528 197 --------------------------------------T----AKV-----------A--NALG---------ANASA-- 210 (420)
T ss_pred --------------------------------------h----hhh-----------c--cchh---------ccccc--
Confidence 0 000 0 0000 00000
Q ss_pred ccCCCCccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhh----cCC--cccchhhhhhhcccccccccc
Q 009176 319 IYHGLGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESR----GCS--GTSSLVSLSSSFGFFGRLIPS 392 (541)
Q Consensus 319 ~~~~~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~sl----g~~--~~~~~Vsl~Si~N~~GRl~~G 392 (541)
.+-...++.+|++.+|.+.+...+....--+..........+. +.+ ......++..+.+.+|.+.+|
T Consensus 211 -------~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 283 (420)
T PRK09528 211 -------VSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAP 283 (420)
T ss_pred -------ccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001245688888888776544333221111111222222221 222 223556666777888888888
Q ss_pred cchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhh-
Q 009176 393 LFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNI- 470 (541)
Q Consensus 393 ~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~- 470 (541)
.+.|.. +|...+....++..++.+++....+ ..+++...+.|+.++......-..+.|.++.|+.++.++.
T Consensus 284 ~l~dr~-------g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 356 (420)
T PRK09528 284 FIINRI-------GAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVG 356 (420)
T ss_pred HHHHHh-------CcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeeh
Confidence 774432 2222233333444445444444433 3456667788888887777777888999999999999887
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhh
Q 009176 471 VVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYAR 532 (541)
Q Consensus 471 ~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r 532 (541)
..+...+|+.+++.+.|+++|..+ |+.+|.+.+++.+++.++.+...++
T Consensus 357 ~~~~~~lg~~ig~~~~G~l~~~~G-------------~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 357 FQFAKQLGAVFLSTLAGNLYDSIG-------------FQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-------------chHHHHHHHHHHHHHHHHHHHHhcC
Confidence 456778999999999999999753 8999999999888877766655433
No 26
>TIGR00898 2A0119 cation transport protein.
Probab=99.59 E-value=8.2e-15 Score=159.49 Aligned_cols=384 Identities=16% Similarity=0.107 Sum_probs=234.4
Q ss_pred CCccccccchHHHHHHhCCC---hhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009176 24 GTNSNFPAYSSQLKQLLSLS---QLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTI 99 (541)
Q Consensus 24 Gt~Y~f~~ys~~lk~~l~~s---q~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i 99 (541)
|-.|.++.+.+++++.+|++ ..|...+.....+|..+ +++.|.+.||+|+|.++.++.+...++......+
T Consensus 103 ~~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~----- 177 (505)
T TIGR00898 103 GWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS----- 177 (505)
T ss_pred CcEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc-----
Confidence 45577768999999999999 99999999999999966 7999999999999999999988888777655431
Q ss_pred ccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhh
Q 009176 100 SHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFN 178 (541)
Q Consensus 100 ~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLlll 178 (541)
..+|.+.++-++.|.+.+...+.+.....+.+|+ +||.+.++.-..++++..+...+. .+. .+- ..+.+.
T Consensus 178 --~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~-~~~-----~~w-r~~~~~ 248 (505)
T TIGR00898 178 --PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVA-YFI-----PDW-RWLQLA 248 (505)
T ss_pred --ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHH-HHh-----hHH-HHHHHH
Confidence 3578888888999999998888888888899987 599999988666666655444443 333 122 222233
Q ss_pred chhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhh
Q 009176 179 SIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLA 258 (541)
Q Consensus 179 a~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 258 (541)
...|.++.++...+++.- |+.. . ...+.++.
T Consensus 249 ~~i~~~~~~~~~~~~~es-p~~l--~-~~~~~~~a--------------------------------------------- 279 (505)
T TIGR00898 249 VSLPTFLFFLLSWFVPES-PRWL--I-SQGRIEEA--------------------------------------------- 279 (505)
T ss_pred HHHHHHHHHHHHHhcCCC-hHHH--H-HCCCHHHH---------------------------------------------
Confidence 334444444443332211 1000 0 00000000
Q ss_pred ccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhch
Q 009176 259 PLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRV 338 (541)
Q Consensus 259 Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~ 338 (541)
++..++..+. ++... .++.. +.+. + ++.+. + ++..+.+++++++
T Consensus 280 ----------~~~l~~~~~~---~~~~~---~~~~~-~~~~-~----------~~~~~-~-------~~~~~~~~l~~~~ 323 (505)
T TIGR00898 280 ----------LKILQRIAKI---NGKKL---PAEVL-SLSL-E----------KDLSS-S-------KKQYSFLDLFRTP 323 (505)
T ss_pred ----------HHHHHHHHHH---cCCCC---CHHHH-hhhh-h----------hhhhh-c-------cCCCcHHHHhCCh
Confidence 0000000000 00000 00000 0000 0 00000 0 1124678999999
Q ss_pred hHHHHHHHHHHhhcccceeecchHHHHhhhcCCcccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHH
Q 009176 339 DFWLYFFVYFSGATLGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPM 418 (541)
Q Consensus 339 ~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~ 418 (541)
.+|...+...+.........+.+....+.++.+ ......+.++....|+++.+++.|.. +|...+.+.++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~l~dr~-------grr~~~~~~~~~~ 395 (505)
T TIGR00898 324 NLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGN-IYLDLFISGLVELPAKLITLLLIDRL-------GRRYTMAASLLLA 395 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccCCC-hHHHHHHHHHHHHHHHHHHHHHHHHh-------CCHHHHHHHHHHH
Confidence 998887666544322111111111111122222 22233345666777888888775432 4555555555555
Q ss_pred HHHHHHHhhccc---chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCC
Q 009176 419 AGAFMLLLNETN---VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGH 495 (541)
Q Consensus 419 ~~~~ll~~~~~~---~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~ 495 (541)
+++.+++....+ ....+...+.+++.++.+.+..++++|.|+.++-++-.|+......+|+.++|.+.+ + |.. .
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~-~ 472 (505)
T TIGR00898 396 GVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEK-W 472 (505)
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHH-H
Confidence 555554443332 234445567788888899999999999999999999999999999999999998888 3 332 2
Q ss_pred CCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 496 NAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 496 ~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
+..+|.+.+++++++.++.+++
T Consensus 473 ------------~~~~~~~~~~~~~~~~~~~~~l 494 (505)
T TIGR00898 473 ------------LFLPLVLFGGLALLAGILTLFL 494 (505)
T ss_pred ------------HhhHHHHHHHHHHHHHHHHHcC
Confidence 4678888888888887777665
No 27
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.59 E-value=1.4e-13 Score=146.20 Aligned_cols=379 Identities=13% Similarity=0.095 Sum_probs=222.5
Q ss_pred cchhHHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHH
Q 009176 6 NILQWLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLG 84 (541)
Q Consensus 6 ~~~rw~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~ 84 (541)
+++.+....+....+...+..|. .. +.+.+.+|+|.+|...+.....++..+ .++.|.+.||+++|.++.+|.+..
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~--~~-~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~ 88 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQG--WL-SPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLW 88 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHH--hH-HHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 34556666666666777776554 23 445567899999999999999999866 899999999999999999999888
Q ss_pred HHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCC-CCCceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 85 LIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFP-FDRQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 85 ~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP-~~RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
.++.... . ..+- ...++|.+.+.-++.|.+......+......+++| ++||++.|+.-...+++.+++..+.....
T Consensus 89 ~~~~~~~-~-~~~~-~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l 165 (402)
T TIGR00897 89 CVGHAAF-I-VFGL-GHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYA 165 (402)
T ss_pred HHHHHHH-H-HHhc-cCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8875433 1 1111 11245666666667777765433333333446665 58999999877776665433332221111
Q ss_pred cCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCC
Q 009176 164 TSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLL 243 (541)
Q Consensus 164 ~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~ 243 (541)
+... ... . .+. ... .+..
T Consensus 166 -----------------------------~~~~-g~~-----------~-~~~----~~~---~~~~------------- 183 (402)
T TIGR00897 166 -----------------------------IPAF-GEM-----------N-TLW----SAL---AFVL------------- 183 (402)
T ss_pred -----------------------------cccc-chH-----------H-HHH----HHH---HHHH-------------
Confidence 0000 000 0 000 000 0000
Q ss_pred CchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCC
Q 009176 244 PPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGL 323 (541)
Q Consensus 244 ~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (541)
..+++.++. . ++ . . +++. ++++ ++ .+
T Consensus 184 ------~~~~~~~~~---~------~~---~-~----~~~~--------------~~~~----------~~-~~------ 209 (402)
T TIGR00897 184 ------TGGVIALFS---N------KD---I-F----TPQH--------------MQTR----------EK-FS------ 209 (402)
T ss_pred ------HHHHHHHhc---c------CC---C-C----Cccc--------------ccCC----------cc-hh------
Confidence 000000000 0 00 0 0 0000 0000 00 00
Q ss_pred CccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCCc--ccchhhhhhhcccccccccccchhhhccc
Q 009176 324 GAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRS 401 (541)
Q Consensus 324 ~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~ 401 (541)
+.....++.++++.+|.+.+..++....-.....-.....+++|++. .....++..+.+.+|++..|.+.|...
T Consensus 210 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~-- 285 (402)
T TIGR00897 210 --ELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLG-- 285 (402)
T ss_pred --hHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence 00012457889999999887766654322223334445556777753 345667788899999999988844321
Q ss_pred CCCCChhHHHHHHHHHHHH---HHHHHhh--ccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhh
Q 009176 402 KHMIPSPASIGALMAPMAG---AFMLLLN--ETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANI 475 (541)
Q Consensus 402 ~~~~~R~~~l~~~~~~~~~---~~ll~~~--~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~ 475 (541)
+|........+.+.+ ....... ..+ ..+++...+.|+++++..+ ..+.++|. .+++.|+.+|+.+++.
T Consensus 286 ----~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~-~~~~~g~~~g~~~~~~ 359 (402)
T TIGR00897 286 ----WMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTL-APKHKGAAMSVLNLSA 359 (402)
T ss_pred ----chhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhh-CcchhHHHHHHHHHHH
Confidence 122211111111122 1111111 122 2355677888999887654 45667776 5679999999999999
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 476 PIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 476 ~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
.+|..++|.++|.++|..+ +...|.+.+++.+++.++..++
T Consensus 360 ~lg~~~gp~i~g~l~~~~g-------------~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 360 GLSAFLAPAIAVLFIGFFG-------------AIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHHHhhcc-------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999864 6889999998888888777665
No 28
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.58 E-value=6.9e-14 Score=141.60 Aligned_cols=330 Identities=19% Similarity=0.142 Sum_probs=232.0
Q ss_pred CccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 009176 25 TNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLS 103 (541)
Q Consensus 25 t~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~ 103 (541)
..+.++.+.|.+.+++|.|++|.+.+.....++..+ .++.|.+.||+++|..+.+|.+...+++....+. .+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 86 (352)
T cd06174 14 DRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA-------SS 86 (352)
T ss_pred hhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh-------cc
Confidence 456677888899999999999999999999999966 8999999999999999999999999999887765 24
Q ss_pred HHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhh
Q 009176 104 YAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFP 182 (541)
Q Consensus 104 ~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p 182 (541)
+|.+.+..++.|.+.+...++.-....+.+|+ +|+++.|+.-...++++.+-..+...+.. .+.-...+.+...+
T Consensus 87 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 162 (352)
T cd06174 87 LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE----SLGWRWLFLILAIL 162 (352)
T ss_pred HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH----HhhHHHHHHHHHHH
Confidence 67778888888998888777777777799997 89999999888888887777666655541 11111111111111
Q ss_pred hHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhcccc
Q 009176 183 LLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVI 262 (541)
Q Consensus 183 ~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~i 262 (541)
.++..+...+.+
T Consensus 163 ~~~~~~~~~~~~-------------------------------------------------------------------- 174 (352)
T cd06174 163 GLLLALLLLFLL-------------------------------------------------------------------- 174 (352)
T ss_pred HHHHHHHHHHHH--------------------------------------------------------------------
Confidence 111111110000
Q ss_pred ccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHH
Q 009176 263 PLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWL 342 (541)
Q Consensus 263 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwl 342 (541)
+++|.
T Consensus 175 ---------------------------------------------------------------------------~~~~~ 179 (352)
T cd06174 175 ---------------------------------------------------------------------------RLLLL 179 (352)
T ss_pred ---------------------------------------------------------------------------HHHHH
Confidence 22333
Q ss_pred HHHHHHHhhcccceeecchHHHHhhh-cCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhH-HHHHHHHHH
Q 009176 343 YFFVYFSGATLGLVFLNNLGQIAESR-GCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPA-SIGALMAPM 418 (541)
Q Consensus 343 lf~~~~~g~g~Glm~I~n~g~i~~sl-g~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~-~l~~~~~~~ 418 (541)
+.+..++....-..+.....++.++. +.+ +.....++..+.+.+|++..|.+.|.. +|.. .+.....+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 252 (352)
T cd06174 180 LALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-------GRRRLLLLIGLLLA 252 (352)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhhhHHHHHHHHHH
Confidence 33333333222222222333333322 332 233455566777788888888774432 2223 444455555
Q ss_pred HHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCC
Q 009176 419 AGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNA 497 (541)
Q Consensus 419 ~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~ 497 (541)
.++.+......+ ..+++...+.|++.+..++..++.+.|.+..|+.++.+++......+|..+++.+.|.++|..+
T Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~--- 329 (352)
T cd06174 253 ALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG--- 329 (352)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC---
Confidence 555555554443 4577788999999999999999999999999999999999999999999999999999998543
Q ss_pred CCCccccccccHHHHHHHHHHHHHHHHHHHH
Q 009176 498 HNGKCMGMACYRSTFILWGSFCLFGTFLALI 528 (541)
Q Consensus 498 ~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~ 528 (541)
|+..|.+.+++++++.++..+
T Consensus 330 ----------~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 330 ----------YGGVFLILAALALLAALLLLL 350 (352)
T ss_pred ----------cchHHHHHHHHHHHHHHHhee
Confidence 799999999998888776553
No 29
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.56 E-value=3.6e-14 Score=153.23 Aligned_cols=376 Identities=12% Similarity=0.070 Sum_probs=228.3
Q ss_pred HhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccc
Q 009176 39 LLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNS 117 (541)
Q Consensus 39 ~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g 117 (541)
.+++|.++...+..+..+|..+ ++++|.+.||+++|.++.++.+...++.......... .+|.+.+.-++.|.+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGG-----GIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHc-----CchHHHHHHHHHHHh
Confidence 6889999999999999999966 8999999999999999999998888887665444332 345666777788899
Q ss_pred cccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHhHhhccceeeee
Q 009176 118 ICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREI 196 (541)
Q Consensus 118 ~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~ 196 (541)
++...+++.....+.||+ +||++.|+......++..+-..+...+.... .+=...|.+ .++...+..++...+.+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~-~gw~~~f~i-~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW-GGWPMIFYV-FGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCeehhh-hhHHHHHHHHHHHHHhcCC
Confidence 988888877777899985 7999999998888888777666665554100 011111211 1111111111111111100
Q ss_pred cCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccccccccchhhhhhhhh
Q 009176 197 GDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKR 276 (541)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~ 276 (541)
++ ++
T Consensus 223 --p~------~~-------------------------------------------------------------------- 226 (465)
T TIGR00894 223 --PS------IH-------------------------------------------------------------------- 226 (465)
T ss_pred --cc------cC--------------------------------------------------------------------
Confidence 00 00
Q ss_pred hhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHHHHHHHhhcccce
Q 009176 277 LINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLV 356 (541)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm 356 (541)
++.+ + ++....++..+ ++.+.. +....+++.++++++|.+++..++.......
T Consensus 227 -----~~~~----~-~~~~~i~~~~~---------~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (465)
T TIGR00894 227 -----PCIS----K-FEKKYINSSLQ---------GQKGST--------RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTI 279 (465)
T ss_pred -----CCCC----H-HHHHHHHhhcc---------cccCCC--------CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 00000000000 000000 0113478999999999999888776544434
Q ss_pred eecchHHHHh-hhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHH----HHHHHHHHHHHHHHHhh-c
Q 009176 357 FLNNLGQIAE-SRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPAS----IGALMAPMAGAFMLLLN-E 428 (541)
Q Consensus 357 ~I~n~g~i~~-slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~----l~~~~~~~~~~~ll~~~-~ 428 (541)
...-+....+ .+|++ +.....++..+...+|++++|++.|...+++ ...|... ..+..+..++..+.... .
T Consensus 280 ~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (465)
T TIGR00894 280 LPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSK-TLSLTAARKIFNGIGGLGPGIFAYALPYLS 358 (465)
T ss_pred HHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4445555543 46775 3456677888899999999999855432332 2233322 11111111111112222 1
Q ss_pred ccch-hHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhc--CCCCCCCccccc
Q 009176 429 TNVA-LYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKE--GHNAHNGKCMGM 505 (541)
Q Consensus 429 ~~~~-l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~--~~~~~~~~C~G~ 505 (541)
.+.. ..+...+.+.+++......-....|..+ ++.|+..|+..+...+|+.+.|.+.|++.|.+ +.
T Consensus 359 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~---------- 427 (465)
T TIGR00894 359 AAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNV---------- 427 (465)
T ss_pred CchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchH----------
Confidence 2222 2233445555555555544455556654 59999999999999999999999999998865 33
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 009176 506 ACYRSTFILWGSFCLFGTFLALILYARTRKFYS 538 (541)
Q Consensus 506 ~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~~Y~ 538 (541)
|+..|.+.+++++++.++........+.-+.
T Consensus 428 --~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~ 458 (465)
T TIGR00894 428 --WLIVFLIMAFVNILCVIFYLIFGSAERQDWA 458 (465)
T ss_pred --HHHHHHHHHHHHHHHHHHeeeeecceecCCC
Confidence 8999999999999998887766544444343
No 30
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.54 E-value=4.2e-13 Score=141.01 Aligned_cols=139 Identities=12% Similarity=0.073 Sum_probs=102.4
Q ss_pred hhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHH
Q 009176 376 LVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTT 454 (541)
Q Consensus 376 ~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~i 454 (541)
..++..+.+.+++...|.+.|.. +|...+........++.+.+....+ ..+++...+.|++.|..++...+.
T Consensus 263 ~~~~~~l~~~~~~~~~g~l~dr~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 335 (408)
T PRK09874 263 IASVPGVAALLSAPRLGKLGDRI-------GPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTL 335 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-------ccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHH
Confidence 34455666778888877774421 3333333334444444444443333 345667778999999999999999
Q ss_pred hhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009176 455 TTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTR 534 (541)
Q Consensus 455 vse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r 534 (541)
+.|....++.|..+++......+|..+++.++|.+.|..+ |+.+|.+.+++++++.++.....+|.+
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-------------~~~~f~~~~~~~l~~~~~~~~~~~~~~ 402 (408)
T PRK09874 336 LVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-------------FRAVFLVTAGVVLFNAVYSWNSLRRRR 402 (408)
T ss_pred HHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-------------hhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999988653 899999999999999888876544444
No 31
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.53 E-value=6.9e-14 Score=160.03 Aligned_cols=151 Identities=12% Similarity=0.034 Sum_probs=113.4
Q ss_pred cchhHHHHHHHHHHHHhcCC-ccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHH
Q 009176 6 NILQWLSLVGAIWLQSINGT-NSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTL 83 (541)
Q Consensus 6 ~~~rw~~l~as~~v~~~~Gt-~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~ 83 (541)
.+.+|..++...+.....|- ....+..-|.+++.+|++..+...+..+..+|..+ .++.|.+.|++|++.+++++.+.
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 34567766666666555543 22355667889999999999999999999999966 88999999999999999998877
Q ss_pred HHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHH
Q 009176 84 GLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAI 162 (541)
Q Consensus 84 ~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~ 162 (541)
..++-.+...+ ..+|.+.++-++.|.+.+.....+.....+.+|. +||.+.++.-.+..+++.+-..+...+
T Consensus 242 ~~i~~ll~afa-------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 242 NGFFAFFSSFV-------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred HHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766554322 1357777778888888776666666666788886 699999999888888777666555444
Q ss_pred h
Q 009176 163 E 163 (541)
Q Consensus 163 ~ 163 (541)
.
T Consensus 315 l 315 (742)
T TIGR01299 315 I 315 (742)
T ss_pred H
Confidence 3
No 32
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.53 E-value=8.2e-14 Score=142.58 Aligned_cols=333 Identities=10% Similarity=-0.013 Sum_probs=212.5
Q ss_pred HHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHH
Q 009176 35 QLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVL 113 (541)
Q Consensus 35 ~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l 113 (541)
......+.|..|...+.....++..+ .++.|.+.||+++|.++.++.+...++...+...-.. ...++|++.+..++
T Consensus 24 ~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l 101 (365)
T TIGR00900 24 LYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALL--GGLNIWQVYVLAGI 101 (365)
T ss_pred HHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHc--CCCcHHHHHHHHHH
Confidence 34555789999999999999999865 8999999999999999999988888877766554322 22467888888888
Q ss_pred hccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHhHhhccce
Q 009176 114 AGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLACVVTSPV 192 (541)
Q Consensus 114 ~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v~l~~~~~ 192 (541)
.|.+.+..+++......+.+|+ +|+.+.|+.-...+++..+-..+...+.. .-+-. ..+.+...+.+++.+....
T Consensus 102 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~g~~-~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 102 LAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA---TLGIK-WAIWVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH---HhhHH-HHHHHHHHHHHHHHHHHHh
Confidence 8988887777766666688886 69999998888777776655544433321 00000 0000000011111110000
Q ss_pred eeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccccccccchhhhh
Q 009176 193 VREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPLGEKIRCFV 272 (541)
Q Consensus 193 ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~ 272 (541)
+++. +
T Consensus 178 ~~~~-------------------------------------------------------------------------~-- 182 (365)
T TIGR00900 178 VRIP-------------------------------------------------------------------------E-- 182 (365)
T ss_pred cccc-------------------------------------------------------------------------c--
Confidence 0000 0
Q ss_pred hhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHHHHHHHhhc
Q 009176 273 EDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYFFVYFSGAT 352 (541)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g 352 (541)
+ ++. + +++. +.+. . ++.....++.++++.+|.+.+..++...
T Consensus 183 -----~---~~~-~------------~~~~----------~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (365)
T TIGR00900 183 -----L---AAS-E------------IQAL----------SNAV--L-----RDTREGIKFVLKNPLLRTLLLLALLFNL 224 (365)
T ss_pred -----C---CCc-c------------cccc----------chhH--H-----HHHHhHHHHHHcCcHHHHHHHHHHHHHH
Confidence 0 000 0 0000 0000 0 0001134678888999988777666544
Q ss_pred ccceee-cchHHHHhh-hcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhc
Q 009176 353 LGLVFL-NNLGQIAES-RGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNE 428 (541)
Q Consensus 353 ~Glm~I-~n~g~i~~s-lg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~ 428 (541)
...... +-.....+. +|.+ +.....++.++...+|++..|.++|.. +|...+........++.+++...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 297 (365)
T TIGR00900 225 VFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-------KRMALMTGAIFVIGLAILVVGLT 297 (365)
T ss_pred HHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------chhHHHHHHHHHHHHHHHHHHhh
Confidence 443333 222333343 5654 345567777888888999888776532 34444443344444444444333
Q ss_pred cc--chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhc
Q 009176 429 TN--VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKE 493 (541)
Q Consensus 429 ~~--~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~ 493 (541)
.+ ..+++...+.|+++|...+...+++.|.+..++.|+.+|+..+...+|..+++.+.|.++|..
T Consensus 298 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 298 PPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 32 345667889999999999999999999999999999999999999999999999999999974
No 33
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.53 E-value=5.7e-13 Score=138.29 Aligned_cols=147 Identities=12% Similarity=-0.007 Sum_probs=109.9
Q ss_pred chhHHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHH
Q 009176 7 ILQWLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGL 85 (541)
Q Consensus 7 ~~rw~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~ 85 (541)
++|++.+.+........+.. .+...-|++++.+|+|.+|...+.....+|..+ .++.|.+.||+++|.++.+|.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGID-MYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFA 81 (385)
T ss_pred chHHHHHHHHHHHHHHHHHH-HhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHH
Confidence 44555444444433333333 344445888999999999999999999999866 8999999999999999999998888
Q ss_pred HHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHH
Q 009176 86 IGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNA 161 (541)
Q Consensus 86 ~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~ 161 (541)
++....... .++|.+++..++.|.+.+...++......+.+|+ +||++.|+.-....+++.+-..+...
T Consensus 82 ~~~~~~~~~-------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 151 (385)
T TIGR00710 82 LSSLGLALS-------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGY 151 (385)
T ss_pred HHHHHHHHH-------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887765432 2467788888889999888777776666788986 69999998877777776665555443
No 34
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.52 E-value=7e-13 Score=139.70 Aligned_cols=346 Identities=14% Similarity=0.092 Sum_probs=202.5
Q ss_pred cccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHH
Q 009176 27 SNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYA 105 (541)
Q Consensus 27 Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w 105 (541)
+.+...-|.+++++|+|.+|.+.+..+..+|..+ .++.|.+.||+|+|.++.+|.+...++..+.- .. .++|
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~--~~-----~~~~ 92 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFT--LS-----SSYL 92 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHH--Hh-----CcHH
Confidence 3555677899999999999999999999999966 79999999999999999999988887775443 22 2457
Q ss_pred HHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhH
Q 009176 106 HIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLL 184 (541)
Q Consensus 106 ~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~ 184 (541)
++.+..++.|.+.+...........+.+|+ +|+.+.|+.-....++..+-..+...+.
T Consensus 93 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~--------------------- 151 (382)
T PRK10091 93 MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS--------------------- 151 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh---------------------
Confidence 777777888887664433333333467877 5787777654444444433322222111
Q ss_pred hHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHH--Hhhhcccc
Q 009176 185 ACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVI--CLLAPLVI 262 (541)
Q Consensus 185 v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~--ll~~Pl~i 262 (541)
+.. ++...+.+..+. ..++.+ ....|
T Consensus 152 -------------~~~-------------gwr~~f~~~~~~-----------------------~~~~~~~~~~~lp--- 179 (382)
T PRK10091 152 -------------QEF-------------SWRYTFLLIAVF-----------------------NIAVLASIYFWVP--- 179 (382)
T ss_pred -------------hhc-------------cHHHHHHHHHHH-----------------------HHHHHHHHHHhCC---
Confidence 000 011111110000 000000 00011
Q ss_pred ccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHH
Q 009176 263 PLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWL 342 (541)
Q Consensus 263 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwl 342 (541)
+ . ++ + + +.+. ++ ..+.++++++|.
T Consensus 180 -------~-----------~--~~------------~-~-----------~~~~---------~~---~~~~~~~~~~~~ 203 (382)
T PRK10091 180 -------D-----------I--RD------------E-A-----------KGGL---------RE---QFHFLRSPAPWL 203 (382)
T ss_pred -------C-----------C--Cc------------c-c-----------ccCH---------HH---HHHHhcChHHHH
Confidence 0 0 00 0 0 0000 01 134678888998
Q ss_pred HHHHHHHhhcccceeecchHHHH-hhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHH
Q 009176 343 YFFVYFSGATLGLVFLNNLGQIA-ESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMA 419 (541)
Q Consensus 343 lf~~~~~g~g~Glm~I~n~g~i~-~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~ 419 (541)
++...+++...-....+.+.+.. +..|++ +.....++.++.+.+||++.|.+.|.. +|...+.....++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-------~~~~~~~~~~~~~~ 276 (382)
T PRK10091 204 IFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-------SPLRIAAVTDFIIV 276 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-------CchhHHHHHHHHHH
Confidence 88776665322111122223333 345765 356788899999999999999884422 23333333444455
Q ss_pred HHHHHHhh-ccc-chhHHHHHHHHHhhhccch-hhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCC
Q 009176 420 GAFMLLLN-ETN-VALYTSTAIIGVCSGAITS-ISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHN 496 (541)
Q Consensus 420 ~~~ll~~~-~~~-~~l~~~s~liG~~yG~~~~-l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~ 496 (541)
++.+++.. ..+ ....+...+.++.+++... .....+.+.++.++.+...+ .....+|..++|.++|.++|.+.+
T Consensus 277 i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~Gp~~~G~l~~~~~~- 353 (382)
T PRK10091 277 LALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGG--QIAFNLGSAIGAYCGGMMLTLGLA- 353 (382)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHH--HHHHHHHHHHHHHHhHHHHHcccC-
Confidence 55443322 222 2233334455555443332 33345667777777776432 445678999999999999999887
Q ss_pred CCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 497 AHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 497 ~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
|+..|.+.++++++++.+...+
T Consensus 354 -----------~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 354 -----------YNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred -----------cchHHHHHHHHHHHHHHHHHHH
Confidence 9999999988777666554444
No 35
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.52 E-value=3.9e-13 Score=143.17 Aligned_cols=382 Identities=12% Similarity=0.051 Sum_probs=227.8
Q ss_pred ccchhHHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHH
Q 009176 5 SNILQWLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTL 83 (541)
Q Consensus 5 ~~~~rw~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~ 83 (541)
++.++|+.++++.++.++.++ .++..++.+++.+|+|-.+...+-....++..+ +++.|.+.||+++|.++.+|.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~ 85 (400)
T PRK11646 8 RNLGKYFLLIDNMLVVLGFFV--VFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLM 85 (400)
T ss_pred ccccHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHH
Confidence 456789999888888877644 467778889999999999999888888888744 89999999999999999999998
Q ss_pred HHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHH
Q 009176 84 GLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAI 162 (541)
Q Consensus 84 ~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~ 162 (541)
..++...... . .++|++++..++.|.+.+..+.+....-.+.+|+ +||++.|+......++..+-..+...+
T Consensus 86 ~~~~~~~~~~--~-----~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l 158 (400)
T PRK11646 86 RAAGFATMAI--A-----HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWL 158 (400)
T ss_pred HHHHHHHHHH--h-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888776543 1 2457777777888887766555544444577765 799999987666666655544443322
Q ss_pred hcCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCC
Q 009176 163 ETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTL 242 (541)
Q Consensus 163 ~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~ 242 (541)
.. . . +...+.+ .+...++
T Consensus 159 ~~-------------------------------~-g----------------~~~~f~~---~~~~~~~----------- 176 (400)
T PRK11646 159 LQ-------------------------------Y-D----------------FRLVCAT---GAVLFVL----------- 176 (400)
T ss_pred HH-------------------------------h-h----------------HHHHHHH---HHHHHHH-----------
Confidence 20 0 0 0000000 0000000
Q ss_pred CCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCC
Q 009176 243 LPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHG 322 (541)
Q Consensus 243 ~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (541)
..++..+..| + .+. + + .+++
T Consensus 177 -------~~i~~~~~~~----------~-----------~~~--------------~-~------------~~~~----- 196 (400)
T PRK11646 177 -------AAAFNAWLLP----------A-----------YKL--------------S-T------------VRTP----- 196 (400)
T ss_pred -------HHHHHHHhCC----------c-----------ccc--------------c-c------------cchh-----
Confidence 0000000011 0 000 0 0 0000
Q ss_pred CCccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCCc--ccchhhhhhhccc-ccccccccchhhhc
Q 009176 323 LGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCSG--TSSLVSLSSSFGF-FGRLIPSLFGYFFS 399 (541)
Q Consensus 323 ~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~~--~~~~Vsl~Si~N~-~GRl~~G~~s~~~~ 399 (541)
.++ ++++.++++.||.+.+.++............+....++.+.++ .....++.++... ..+..+++.||..
T Consensus 197 --~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~- 271 (400)
T PRK11646 197 --VRE--GMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRF- 271 (400)
T ss_pred --hHH--HHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 011 3467788888886544433221111111222334445444332 2223333333222 2333344444321
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhh
Q 009176 400 RSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIG 478 (541)
Q Consensus 400 ~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~G 478 (541)
+ .|.. +.....+++++.+++...++ ..+.+...+.|++++...+..++++.|....++.|+-+|+..+...+|
T Consensus 272 ----~-~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 345 (400)
T PRK11646 272 ----R-LEHR-LMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALG 345 (400)
T ss_pred ----c-hhHH-HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHH
Confidence 1 1222 22333445555554444433 234455567888888888888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 009176 479 SFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRKFYS 538 (541)
Q Consensus 479 s~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~~Y~ 538 (541)
..+++.++|.++|..++.. =+..+|.+.+.+++++.++.. ...|++|.-|
T Consensus 346 ~~ig~~l~G~l~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 395 (400)
T PRK11646 346 GAIGYIGGGWLFDLGKALN---------QPELPWMMLGIIGLITLLALY-WQFSQKRIAR 395 (400)
T ss_pred HHhcccchHHHHHHHhhcC---------CcchHHHHHHHHHHHHHHHHH-HHHhhchHHH
Confidence 9999999999999864310 047788887777777765543 4455555443
No 36
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.52 E-value=4.5e-13 Score=141.73 Aligned_cols=352 Identities=15% Similarity=0.039 Sum_probs=211.4
Q ss_pred cccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHH
Q 009176 27 SNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYA 105 (541)
Q Consensus 27 Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w 105 (541)
+.|+..-|++++.+|+|.+|...+..+..+|..+ .++.|.+.||+|+|.++ ++++..++.= . ..... ..++|
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~-~~~~~~~~~~-~--~~~~~---~~~~~ 80 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFL-FGSLATFAAA-A--GRLLD---PFNYE 80 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH-HHHHHHHHHH-H--HHHHH---hccHH
Confidence 4577888999999999999999999998999866 89999999999988765 4555444331 1 11111 12567
Q ss_pred HHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhH
Q 009176 106 HIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLL 184 (541)
Q Consensus 106 ~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~ 184 (541)
.+.+.-++.|.++... .++.....+.||+ +||+++|+.-....+++.+=..+...+-+ .
T Consensus 81 ~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~----~--------------- 140 (368)
T TIGR00903 81 WLLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT----A--------------- 140 (368)
T ss_pred HHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----c---------------
Confidence 7888888888888743 3333333577875 79999999887777766655433322210 0
Q ss_pred hHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhcccccc
Q 009176 185 ACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPL 264 (541)
Q Consensus 185 v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~ 264 (541)
. . ....+.+..+++.- ..++.....|
T Consensus 141 -----------~----------g-------Wr~~f~~~~~l~~~---------------------~~~~~~~~lp----- 166 (368)
T TIGR00903 141 -----------G----------G-------LQLLIIPIAAVAAA---------------------GIILVLAALP----- 166 (368)
T ss_pred -----------c----------c-------hHHHHHHHHHHHHH---------------------HHHHHHHHcC-----
Confidence 0 0 11111110000000 0000000111
Q ss_pred ccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHH
Q 009176 265 GEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYF 344 (541)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf 344 (541)
| + ++.+ .+ . .+. . + .....+++++++++|.+.
T Consensus 167 -----~---~-------p~~~------------~~-~----------~~~-~-~--------~~~~~~~ll~~~~~~~~~ 198 (368)
T TIGR00903 167 -----A---L-------PFQA------------AE-G----------FGF-K-D--------AVKEFGALAGRKDLWIIG 198 (368)
T ss_pred -----C---C-------CCCC------------CC-C----------cch-H-H--------HHHHHHHHHcChhHHHHH
Confidence 0 0 0000 00 0 000 0 0 001257899999999999
Q ss_pred HHHHHhhcccceeecchHHHHhhhcCCcccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHH
Q 009176 345 FVYFSGATLGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFML 424 (541)
Q Consensus 345 ~~~~~g~g~Glm~I~n~g~i~~slg~~~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll 424 (541)
+.+++....=....+-+.++.++.|++.. .-...++....|-++.++++|..+|++ .|.........++++..++
T Consensus 199 ~~~~~~~~~~~~~~~wlp~~L~~~g~s~~--~~~~~~l~~~~g~~g~~~~~d~~~r~~---~r~~~~~~~~~~~a~~~~~ 273 (368)
T TIGR00903 199 AILGFGVALFDNLAIWLEAALRPAGLEDI--AGDAVALAILAGLIGVAVIPDRVARAG---LRSIYIRAAALLIAAFFLA 273 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCChH--HHHHHHHHHHHHHHHHHHhhHHhhhhh---hHHHHHHHHHHHHHHHHHH
Confidence 88888755433334446777776676532 122233333445555677866554432 2333333233333333333
Q ss_pred Hhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccc
Q 009176 425 LLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCM 503 (541)
Q Consensus 425 ~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~ 503 (541)
+....+ ....+...+.|++.+..++++.++++|.|.+++-|+-.|+.....-+|+..++.+.+.+.. +
T Consensus 274 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---~-------- 342 (368)
T TIGR00903 274 LAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---S-------- 342 (368)
T ss_pred HHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc---C--------
Confidence 333322 2334445566777777888888999999999999999999999888999999887777762 3
Q ss_pred cccccHHHHHHHHHHHHHHHHHHH
Q 009176 504 GMACYRSTFILWGSFCLFGTFLAL 527 (541)
Q Consensus 504 G~~CY~~tF~i~~~~~~~g~~lsl 527 (541)
.+..|.+.++.++++.+..+
T Consensus 343 ----~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 343 ----AEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred ----HHHHHHHHHHHHHHHHHHHH
Confidence 68888888888888777653
No 37
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.50 E-value=1.4e-12 Score=141.33 Aligned_cols=412 Identities=12% Similarity=0.081 Sum_probs=227.8
Q ss_pred chhHHHHHHHHHHHHhcCCc-cccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHH
Q 009176 7 ILQWLSLVGAIWLQSINGTN-SNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLG 84 (541)
Q Consensus 7 ~~rw~~l~as~~v~~~~Gt~-Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~ 84 (541)
+.||..+.+........+-. +..+..-|++++.+|+|+.|.+.+.....+|..+ +++.|.+.||+|+|.+++++.+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34566555444444443333 3455667999999999999999999888998866 899999999999999999999888
Q ss_pred HHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 85 LIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 85 ~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
.++....... .++|.+.+..++.|.+.+..+.++.....+.||+ +||.+.|+......+++.+-..+...+.
T Consensus 96 ~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 168 (496)
T PRK03893 96 SVGTLACGFA-------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV 168 (496)
T ss_pred HHHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8887765542 2467777777888888776666665566788987 5999999998888887776666666554
Q ss_pred cCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccC-Cc-chhh-------hHHHHHHHHHH-HHhh
Q 009176 164 TSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTR-GG-FVFM-------FFVTIVTGCYA-VLGS 233 (541)
Q Consensus 164 ~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~-~~-f~~~-------~~~~~~~a~yl-~~~~ 233 (541)
+ .-.-...+.++..+.++.++. .+.. |++++.+..++++++ .. +... ....+...... ....
T Consensus 169 ~----~~~w~~~f~~~~~~~~~~~~~---~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (496)
T PRK03893 169 P----VWGWRALFFIGILPIIFALWL---RKNL-PEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFC 240 (496)
T ss_pred c----cCCHHHHHHHHHHHHHHHHHH---HHhC-CCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHH
Confidence 2 111122223333443332222 2222 221100000000000 00 0000 00000000000 0000
Q ss_pred cccccccCCCCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCC
Q 009176 234 LDLSKLKTLLPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRD 313 (541)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (541)
... .. ..........+++..- -+ ....
T Consensus 241 ~~~-~~----~~~~~~~~~~~~~~~~---~~-------------------------------~~~~-------------- 267 (496)
T PRK03893 241 FAG-NL----QNAAIVAVLGLLCAAI---FI-------------------------------SFMV-------------- 267 (496)
T ss_pred HHh-hh----cchhHHHHHHHHHHHH---HH-------------------------------HHHH--------------
Confidence 000 00 0000000000000000 00 0000
Q ss_pred CCCCCccCCCCccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHh-hhcCC--cccchhhhhhhcccccccc
Q 009176 314 DDSDGIYHGLGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAE-SRGCS--GTSSLVSLSSSFGFFGRLI 390 (541)
Q Consensus 314 ~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~-slg~~--~~~~~Vsl~Si~N~~GRl~ 390 (541)
+.+. . +.+.++.+.+..++....+......+.+..+ .+|++ +....++...+...+|++.
T Consensus 268 -~~~~--------~--------~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~ 330 (496)
T PRK03893 268 -QSSG--------K--------RWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCV 330 (496)
T ss_pred -Hhcc--------c--------chhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 0112333333333333333333345566664 66775 4567888899999999999
Q ss_pred cccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhh-cccc--hhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccch
Q 009176 391 PSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLN-ETNV--ALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVN 467 (541)
Q Consensus 391 ~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~-~~~~--~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~n 467 (541)
+|++.|.. +|...+.....+..+..+++.. ..+. .+.+...+.++...+..++.|++++|.++.++.|+.
T Consensus 331 ~g~l~dr~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 403 (496)
T PRK03893 331 GGFLGDWL-------GTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAG 403 (496)
T ss_pred HHHHHHHh-------cchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcc
Confidence 99885532 2222233233333333222222 1121 122223333444445678999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHH
Q 009176 468 HNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGT 523 (541)
Q Consensus 468 yg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~ 523 (541)
+|+......+|+.++|.+.|.++|+.+ |+.+|.+.++.+.+..
T Consensus 404 ~~~~~~~~~~g~~lgp~l~g~l~~~~g-------------~~~~~~~~~~~~~~~~ 446 (496)
T PRK03893 404 LGFTYNVGALGGALAPILGALIAQRLD-------------LGTALASLSFSLTFVV 446 (496)
T ss_pred cchhhhhhhHHHHHHHHHHHHHhccCC-------------hHHHHHHHHHHHHHHH
Confidence 999998889999999999999999764 6777766665544433
No 38
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.50 E-value=1.2e-12 Score=140.44 Aligned_cols=371 Identities=11% Similarity=0.061 Sum_probs=222.7
Q ss_pred ccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHH
Q 009176 30 PAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIF 108 (541)
Q Consensus 30 ~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~ 108 (541)
+..-|++++.+|+|.+|...+..+..+|..+ ++++|.+.||+|+|.++.+|.+...+|....+.+-.. .++|.+.
T Consensus 23 ~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~----~~~~~~l 98 (410)
T TIGR00885 23 NPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI----MNYTLFL 98 (410)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh----ccHHHHH
Confidence 3556999999999999999999999999966 8999999999999999999999999998765433221 3578888
Q ss_pred HHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHhHh
Q 009176 109 LLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLACV 187 (541)
Q Consensus 109 ~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v~l 187 (541)
+..++.|.|.+..++++-....+..|+ +|+...++.-+++++.+.+=..+...+.... .++..... .....|.
T Consensus 99 ~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~-~~~~~~~~-~~~~~~~---- 172 (410)
T TIGR00885 99 VGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSN-LPHQSQDV-LDKLSPE---- 172 (410)
T ss_pred HHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Cccchhhh-hhhcCHH----
Confidence 888999999998877655544456665 6899999999999998887777776665210 00000000 0000000
Q ss_pred hccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHh-hhcccccccc
Q 009176 188 VTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICL-LAPLVIPLGE 266 (541)
Q Consensus 188 ~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll-~~Pl~ip~~~ 266 (541)
... .....+.......| +....+ ...+.+++ ..+
T Consensus 173 -----------~~~----~~~~~~~~~w~~~f---------l~~a~~--------------~~~~~~~~~~~~------- 207 (410)
T TIGR00885 173 -----------ELS----AIKHSDLASVQTPY---------MIIGAV--------------VLAVALLIMLTK------- 207 (410)
T ss_pred -----------HHH----HHHHHHHHHHHHHH---------HHHHHH--------------HHHHHHHHHHhc-------
Confidence 000 00000111111111 110000 00000000 000
Q ss_pred chhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHHHH
Q 009176 267 KIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYFFV 346 (541)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf~~ 346 (541)
.|+.++ + ++ +++. .++ +.++.++++.+|+..+.
T Consensus 208 --------------~p~~~~------------~-~~----------~~~~--------~~~--~~~~~~~~~~~~~~~l~ 240 (410)
T TIGR00885 208 --------------MPALNH------------S-DA----------KQIS--------FSA--SLSRLARIRHYREGVIA 240 (410)
T ss_pred --------------CCCCCc------------c-cc----------cccc--------chh--hHHHHHhChhHHHHHHH
Confidence 000000 0 00 0000 011 33567889999998777
Q ss_pred HHHhhcccceeecchHHHHhhhcC--Cc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHH
Q 009176 347 YFSGATLGLVFLNNLGQIAESRGC--SG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAF 422 (541)
Q Consensus 347 ~~~g~g~Glm~I~n~g~i~~slg~--~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ 422 (541)
.++-.|.-....+++.+..+..+. ++ ++...+..-..-.+||+++|++.|.. + +|. .+.+..+..++..
T Consensus 241 ~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~-----~~~-~l~i~~~~~~~~~ 313 (410)
T TIGR00885 241 QFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-A-----AHK-VLMAYAIIGMALC 313 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C-----HHH-HHHHHHHHHHHHH
Confidence 777666654555666666655432 21 23345554556679999999884422 1 333 3444444444444
Q ss_pred HHHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCcc
Q 009176 423 MLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKC 502 (541)
Q Consensus 423 ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C 502 (541)
++.....+.......+++|++.+..|+..-+...+.+|.+.-..--+++. +. +|+.++|++.|.+.|..+.+..
T Consensus 314 ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~-~~-~Gga~~p~l~G~~~d~~~~~~~---- 387 (410)
T TIGR00885 314 LGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVM-AI-IGGGIVPPLQGFIIDMKEIAAA---- 387 (410)
T ss_pred HHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH-HH-hccchHHHHHHHHHHHhccccc----
Confidence 44444434334456678899999999999999999999666443444444 33 9999999999999996521100
Q ss_pred ccccccHHHHHHHHHH
Q 009176 503 MGMACYRSTFILWGSF 518 (541)
Q Consensus 503 ~G~~CY~~tF~i~~~~ 518 (541)
|. ++.+|++...+
T Consensus 388 -~~--~~~~~~~~~~~ 400 (410)
T TIGR00885 388 -PA--VNTSFILPLLC 400 (410)
T ss_pred -Cc--cchHHHHHHHH
Confidence 00 78899886443
No 39
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.50 E-value=1.1e-12 Score=138.09 Aligned_cols=337 Identities=14% Similarity=0.124 Sum_probs=204.6
Q ss_pred cccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHH
Q 009176 29 FPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHI 107 (541)
Q Consensus 29 f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l 107 (541)
...+-|++++++|+|.+|...+..+..+|..+ .++.|.+.||+|++.++.+|.+...+++..... .+ ++|.+
T Consensus 25 ~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~--~~-----~~~~l 97 (381)
T PRK03633 25 LNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGL--MV-----GFWSW 97 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hc-----cHHHH
Confidence 34557888889999999999999999999866 889999999999999999999998888866432 22 35666
Q ss_pred HHHHHHhccccccccceeeeeecccC-CCCCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHhH
Q 009176 108 FLLTVLAGNSICWINTVCYVVTIKNF-PFDRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLAC 186 (541)
Q Consensus 108 ~~~~~l~g~g~~~~nTa~lvt~v~NF-P~~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v~ 186 (541)
-+..++.|.+.+...........+.. |++||.+.|+-.....++.++-..+...+. +. +
T Consensus 98 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~-----~~---~------------ 157 (381)
T PRK03633 98 LAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVS-----TE---L------------ 157 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----cc---c------------
Confidence 66677878777654433222223344 458999888766665555554433332221 00 0
Q ss_pred hhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhcccccccc
Q 009176 187 VVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPLGE 266 (541)
Q Consensus 187 l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~~~ 266 (541)
.+.. .+. ..+ ......++.. .
T Consensus 158 ------~~~~-----------------~~~----~~~-----------------------------~~~~~~~~~~--~- 178 (381)
T PRK03633 158 ------MSVL-----------------PWV----TGL-----------------------------VLAAILPLLF--T- 178 (381)
T ss_pred ------cchH-----------------HHH----HHH-----------------------------HHHHHHHHHH--h-
Confidence 0000 000 000 0000001000 0
Q ss_pred chhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHHHH
Q 009176 267 KIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYFFV 346 (541)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf~~ 346 (541)
+ .+ ++ + + ++ + ++.+.++.++++.||.....
T Consensus 179 --~-------~~--~~---~--------------~-----------~~-~----------~~~~~~~~~~~~~~~~~~~~ 208 (381)
T PRK03633 179 --R-------IL--NQ---Q--------------A-----------EN-H----------DSTSIWPMLKLRQARLGVNG 208 (381)
T ss_pred --c-------cc--CC---C--------------C-----------CC-C----------CCCCHHHHHHhcchHHHHHH
Confidence 0 00 00 0 0 00 0 00123567788888865433
Q ss_pred HHH-hhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHH
Q 009176 347 YFS-GATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFM 423 (541)
Q Consensus 347 ~~~-g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~l 423 (541)
..+ +...+..+ +-+....+..|.+ +....+++..+.+..||+..|.+.|.. +|...+.....++.++.+
T Consensus 209 ~~~~~~~~~~~~-~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-------~~~~~l~~~~~~~~~~~~ 280 (381)
T PRK03633 209 CIISGIVLGSLY-GLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRF-------GRLLVLRVQVFVVILGSI 280 (381)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-------CcHHHHHHHHHHHHHHHH
Confidence 222 11122111 2234455556765 345678888899999999988774422 333444433444444433
Q ss_pred HHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccc
Q 009176 424 LLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCM 503 (541)
Q Consensus 424 l~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~ 503 (541)
++. .....+....+.|++.+..++...+.+.|....++.+.-.+...++..+|..++|.++|+++|..+
T Consensus 281 ~~~--~~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g--------- 349 (381)
T PRK03633 281 AML--SQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS--------- 349 (381)
T ss_pred HHh--hhHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------
Confidence 332 122233455677877777777777888899988888887888888899999999999999999764
Q ss_pred cccccHHHHHHHHHHHHHHHH
Q 009176 504 GMACYRSTFILWGSFCLFGTF 524 (541)
Q Consensus 504 G~~CY~~tF~i~~~~~~~g~~ 524 (541)
++..|++.+.+.+++.+
T Consensus 350 ----~~~~f~~~~~~~l~~~~ 366 (381)
T PRK03633 350 ----DNLLFIMIASVSFIYLL 366 (381)
T ss_pred ----ccHHHHHHHHHHHHHHH
Confidence 68899988777765543
No 40
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.49 E-value=1.1e-12 Score=140.83 Aligned_cols=191 Identities=13% Similarity=0.086 Sum_probs=133.5
Q ss_pred HHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCC----------cccchhhhhhhcccccccccccchhhhcc
Q 009176 331 AMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS----------GTSSLVSLSSSFGFFGRLIPSLFGYFFSR 400 (541)
Q Consensus 331 ~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~----------~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~ 400 (541)
.++.+|++.||.+++..++....-..+........++.|++ .....+++.++...++++..|.+.|..
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-- 278 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-- 278 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 46788999999888777665332111111222223344432 336677888888888998888774422
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHhhcc--c---chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhh-hh
Q 009176 401 SKHMIPSPASIGALMAPMAGAFMLLLNET--N---VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVV-AN 474 (541)
Q Consensus 401 ~~~~~~R~~~l~~~~~~~~~~~ll~~~~~--~---~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~-~a 474 (541)
+|.+.+....+.+.++..++.... . ..+++..++.|+++|...+..+..++|.++.++.|+.+|+.. ..
T Consensus 279 -----g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~ 353 (418)
T TIGR00889 279 -----GIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMC 353 (418)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 444555555555555544443322 1 235667788999999988999999999999999999999997 67
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009176 475 IPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRK 535 (541)
Q Consensus 475 ~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~ 535 (541)
..+|+.++|.++|+++|..++.+..+ |+.+|.+.+++++++.++.++..+++++
T Consensus 354 ~~lg~~iGp~l~G~l~~~~g~~~~~~-------~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 354 NGFGSLLGYILSGVMVEKMFAYGTFD-------WQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HhhHHHHHHHHHHHHHHHhccccCCc-------hHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 89999999999999999865311011 8999999999988888888877665554
No 41
>PRK10054 putative transporter; Provisional
Probab=99.48 E-value=2.2e-12 Score=137.12 Aligned_cols=379 Identities=11% Similarity=0.005 Sum_probs=207.4
Q ss_pred CccchhHHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHH
Q 009176 4 NSNILQWLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGST 82 (541)
Q Consensus 4 ~~~~~rw~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~ 82 (541)
+.+++.|..++...+. ..|....++..++.+++++|+|.+|...+.....++..+ .++.|.+.||+++|.++.+|.+
T Consensus 4 ~~~~~~~~l~~~~~~~--~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~ 81 (395)
T PRK10054 4 SLRRSTSALLASSLLL--TIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAIT 81 (395)
T ss_pred CCCchHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHH
Confidence 3445556555544443 445555666778889999999999999988888777744 8999999999999999999998
Q ss_pred HHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHH
Q 009176 83 LGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNA 161 (541)
Q Consensus 83 ~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~ 161 (541)
...+++.... +.+ ++|++.++.++.|.+....+++.-.-..+.+|+ +||++.|+.-....+++++-..+...
T Consensus 82 ~~~~~~~~~~--~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~ 154 (395)
T PRK10054 82 AFASGFIAIP--LVN-----NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTL 154 (395)
T ss_pred HHHHHHHHHH--HHh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888876543 222 235544444444433332222222222366655 68888887666555544433333222
Q ss_pred HhcCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccC
Q 009176 162 IETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKT 241 (541)
Q Consensus 162 ~~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~ 241 (541)
+.. . .. +..|.. .++ ..++
T Consensus 155 l~~-------------------------------~-g~------------~~~f~~---~~~----~~~i---------- 173 (395)
T PRK10054 155 LVM-------------------------------Q-SI------------NLPFWL---AAI----CSAF---------- 173 (395)
T ss_pred HHH-------------------------------h-cc------------CcHHHH---HHH----HHHH----------
Confidence 110 0 00 000110 000 0000
Q ss_pred CCCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccC
Q 009176 242 LLPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYH 321 (541)
Q Consensus 242 ~~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (541)
..++..+..| + + +++ + ++ ++ .
T Consensus 174 --------~~i~~~~~~~---------~-------~---~~~---------------~-~~----------~~-~----- 194 (395)
T PRK10054 174 --------PLVFIQIWVQ---------R-------S---EKA---------------I-AT----------ET-G----- 194 (395)
T ss_pred --------HHHHHHHHHh---------c-------c---ccc---------------c-cc----------ch-h-----
Confidence 0000000011 0 0 000 0 00 00 0
Q ss_pred CCCccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhh-cCCcccchhhhhhhcccccccccccc-hhhhc
Q 009176 322 GLGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESR-GCSGTSSLVSLSSSFGFFGRLIPSLF-GYFFS 399 (541)
Q Consensus 322 ~~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~sl-g~~~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~ 399 (541)
+..+.++++++++||.+.+..++.....-.+.....+..... +.+.....++++-..+..+.+...+. .+..+
T Consensus 195 -----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~ 269 (395)
T PRK10054 195 -----SVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLN 269 (395)
T ss_pred -----hhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHc
Confidence 001236788899999887776664433222222333333222 22212223333444444444444333 34443
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHhhc-ccc-hhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhh
Q 009176 400 RSKHMIPSPASIGALMAPMAGAFMLLLNE-TNV-ALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPI 477 (541)
Q Consensus 400 ~~~~~~~R~~~l~~~~~~~~~~~ll~~~~-~~~-~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~ 477 (541)
|+ +|...+...++++.++.+.+... ++. .+.+...+.|++++...+...+.+.|.-..+.-|+-+|... ...+
T Consensus 270 ~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~ 344 (395)
T PRK10054 270 AA----NIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWL 344 (395)
T ss_pred cC----CchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHH
Confidence 32 33333333444455554444432 232 34556778888888777777788888888888888888655 3447
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009176 478 GSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRK 535 (541)
Q Consensus 478 Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~ 535 (541)
|..++|.++|.++|+-+ +...|.+.+....++.++.+ ++.|.|+
T Consensus 345 G~~~Gp~~~G~l~~~~g-------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 388 (395)
T PRK10054 345 GAAINPLVSGVILTTLP-------------PWSLFVILALAIVAAWLLML-KGMRARP 388 (395)
T ss_pred HHHHHHHHHHHHHHHcC-------------hhhHHHHHHHHHHHHHHHHH-hccccCc
Confidence 89999999999999874 57788777666555555544 5555555
No 42
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.48 E-value=2.9e-12 Score=135.67 Aligned_cols=353 Identities=14% Similarity=0.005 Sum_probs=199.8
Q ss_pred chhHHHHHHHHHHHHhcC-CccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHH
Q 009176 7 ILQWLSLVGAIWLQSING-TNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLG 84 (541)
Q Consensus 7 ~~rw~~l~as~~v~~~~G-t~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~ 84 (541)
++.|+..+.....+..+. ....+..--|++++.+|+|+++...+-.+..+|..+ .++.|.+.||+++|.++.++.+..
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 444655555555554322 233333344779999999999999998888899866 789999999999999999998887
Q ss_pred HHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCCC-CceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 85 LIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPFD-RQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 85 ~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~-RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
.++....... .++|++.+..++.|.+.+...........++||++ |+.+.|+.....+++..+-..+...+.
T Consensus 89 ~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 161 (406)
T PRK15402 89 ILTCLAILLA-------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALI 161 (406)
T ss_pred HHHHHHHHHH-------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776665432 24577777777778777655554544455889875 666677665555544433333322221
Q ss_pred cCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCC
Q 009176 164 TSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLL 243 (541)
Q Consensus 164 ~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~ 243 (541)
+ ..+-..-..+.+.... ++++
T Consensus 162 ~---~~~w~~~~~~~~~~~~-~~~~------------------------------------------------------- 182 (406)
T PRK15402 162 H---VLPWRGMFVLFAALAA-LSFF------------------------------------------------------- 182 (406)
T ss_pred H---ccCccHHHHHHHHHHH-HHHH-------------------------------------------------------
Confidence 0 0000000000000000 0000
Q ss_pred CchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCC
Q 009176 244 PPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGL 323 (541)
Q Consensus 244 ~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (541)
......| + ++ ++ +++ +.+.+
T Consensus 183 ---------~~~~~~~----------~-----------~~-~~------------~~~-----------~~~~~------ 202 (406)
T PRK15402 183 ---------GLWRAMP----------E-----------TA-GR------------VGE-----------KLSLK------ 202 (406)
T ss_pred ---------HHHHhCC----------C-----------CC-cc------------ccc-----------cccHH------
Confidence 0000000 0 00 00 000 00000
Q ss_pred CccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHH-hhhcCCcc--cchhhhhhhcccccccccccchhhhcc
Q 009176 324 GAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIA-ESRGCSGT--SSLVSLSSSFGFFGRLIPSLFGYFFSR 400 (541)
Q Consensus 324 ~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~-~slg~~~~--~~~Vsl~Si~N~~GRl~~G~~s~~~~~ 400 (541)
+...+.++.++++.+|.+.+.+++..............+. +.+|.++. ........+...+|++..|.+.|..
T Consensus 203 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-- 278 (406)
T PRK15402 203 --ELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-- 278 (406)
T ss_pred --HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 0001246788999999987776554322111212223333 34566532 3333445556778888888774421
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHhh-----ccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhh
Q 009176 401 SKHMIPSPASIGALMAPMAGAFMLLLN-----ETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVAN 474 (541)
Q Consensus 401 ~~~~~~R~~~l~~~~~~~~~~~ll~~~-----~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a 474 (541)
+|...+....++++++.+++.. ..+ ..+.+..++.|++.|..++.....+-..- .++.|.-.+++.+.
T Consensus 279 -----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~ 352 (406)
T PRK15402 279 -----PLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSS-DVSKGTVSAAMGML 352 (406)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhc-cccccHHHHHHHHH
Confidence 3333333344444444443322 112 23556778889999887766555443332 37889999999999
Q ss_pred hhhhHHHHHHHHHHHhhhcCC
Q 009176 475 IPIGSFLFGYLAALVYHKEGH 495 (541)
Q Consensus 475 ~~~Gs~l~~~laG~iyD~~~~ 495 (541)
..+|..+++.++|++||..+.
T Consensus 353 ~~~~~~~g~~~~~~l~~~~~~ 373 (406)
T PRK15402 353 SMLIFTVGIELSKHAYLGGGN 373 (406)
T ss_pred HHHHHHHHHHHHHhcccCCch
Confidence 999999999999999998876
No 43
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.47 E-value=4.7e-12 Score=134.61 Aligned_cols=363 Identities=13% Similarity=0.089 Sum_probs=218.6
Q ss_pred cchhHHHHHHHHHHHHhcCC-ccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHH
Q 009176 6 NILQWLSLVGAIWLQSINGT-NSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTL 83 (541)
Q Consensus 6 ~~~rw~~l~as~~v~~~~Gt-~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~ 83 (541)
.++-|..+++.+....+.++ .|.-...-|++++.+|+|.+|...+..+..++..+ +++.|.+.||++++.++.++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~ 94 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVL 94 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHH
Confidence 44567776666665444444 34444567889999999999999888788887755 89999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHH
Q 009176 84 GLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAI 162 (541)
Q Consensus 84 ~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~ 162 (541)
..+++...-. . .++|.+.+.-++.|.+.+.....+.....+-||+ +||.+.|+.-+..+++..+-..+...+
T Consensus 95 ~~~~~~~~~~--~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l 167 (394)
T PRK10213 95 LTLSCLLVSF--A-----NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFL 167 (394)
T ss_pred HHHHHHHHHH--H-----ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887655422 2 2467778877888888776655555555688875 699999988877776655544444333
Q ss_pred hcCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCC
Q 009176 163 ETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTL 242 (541)
Q Consensus 163 ~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~ 242 (541)
.+ . . . ....+.+..++
T Consensus 168 ~~-----~-------------------------~----------g-------w~~~f~~~~~l----------------- 183 (394)
T PRK10213 168 GE-----L-------------------------I----------G-------WRNVFNAAAVM----------------- 183 (394)
T ss_pred Hh-----h-------------------------c----------C-------HHHHHHHHHHH-----------------
Confidence 20 0 0 0 00000000000
Q ss_pred CCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCC
Q 009176 243 LPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHG 322 (541)
Q Consensus 243 ~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (541)
..+..+++... .| ++ + + + +++.
T Consensus 184 ------~~~~~l~~~~~--~p-----------------~~-----~----------~-~------------~~~~----- 205 (394)
T PRK10213 184 ------GVLCIFWIIKS--LP-----------------SL-----P----------G-E------------PSHQ----- 205 (394)
T ss_pred ------HHHHHHHHHHH--CC-----------------CC-----C----------c-c------------cccc-----
Confidence 00000000000 00 00 0 0 0 0000
Q ss_pred CCccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHH-HHhhhcCCc--ccchhhhhhhcccccccccccchhhhc
Q 009176 323 LGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQ-IAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFS 399 (541)
Q Consensus 323 ~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~-i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~ 399 (541)
..+.++.++++.+|...+..++..+..........+ +.+.+|++. .....+...+.+.+|++..|...|
T Consensus 206 -----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~--- 277 (394)
T PRK10213 206 -----KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILK--- 277 (394)
T ss_pred -----hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 012356788999998766544433322222233333 345567753 345666677778888877665533
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhh
Q 009176 400 RSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIG 478 (541)
Q Consensus 400 ~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~G 478 (541)
| + +|...+....+..+...++.....+ ..+++...+.|++++......++.+.+.. .++.+...++.+....+|
T Consensus 278 r-~---~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lg 352 (394)
T PRK10213 278 R-S---VKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSL-ADQAEKAGSIQVAVIQLA 352 (394)
T ss_pred c-c---chhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHC-cccHHHHHHHHHHHHHHH
Confidence 1 1 3333222222222222232222323 34666778899999999999998888776 466667777777777888
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHH
Q 009176 479 SFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGT 523 (541)
Q Consensus 479 s~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~ 523 (541)
..+++.++|+++|..+ ++..|...+.++++..
T Consensus 353 ~~~G~~l~G~l~~~~g-------------~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 353 NTCGAAIGGYALDNIG-------------LTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHHHHHHHhccC-------------hhhHHHHHHHHHHHHH
Confidence 8999999999999754 5777777666554443
No 44
>PRK10504 putative transporter; Provisional
Probab=99.46 E-value=6.3e-12 Score=135.67 Aligned_cols=432 Identities=12% Similarity=0.023 Sum_probs=228.0
Q ss_pred cchhHHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHH
Q 009176 6 NILQWLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLG 84 (541)
Q Consensus 6 ~~~rw~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~ 84 (541)
++.||...+.+...-+..-..+.+..+-|.+.+.+|+|+.+...+..+..++..+ .++.|.+.|++++|.++.++.+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~ 85 (471)
T PRK10504 6 DSVRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLF 85 (471)
T ss_pred hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 3344443333333333344455666788899999999999998888888888755 888999999999999988887777
Q ss_pred HHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 85 LIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 85 ~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
.+++...-+ . .++|++.+..++.|.+.+...........+.+|+ +||++.|+.-....+++.+-..+...+.
T Consensus 86 ~~~~~~~~~--~-----~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~ 158 (471)
T PRK10504 86 TLGSLFCAL--S-----GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV 158 (471)
T ss_pred HHHHHHHHH--h-----CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 777754322 1 2457777777888887775555555555578887 6899999887776776666555554444
Q ss_pred cCCCCCc-ccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCC
Q 009176 164 TSSPNKR-AKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTL 242 (541)
Q Consensus 164 ~~~~~~d-~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~ 242 (541)
. ... ...|... +.. ..+..+... ... |..+. .+++.| +... .....+.-.+.....+....
T Consensus 159 ~---~~gw~~~f~~~-~~~-~~l~~~~~~--~~~-~~~~~---~~~r~~---~~~~--~~~~~~~~~~~~~~~~~~~~-- 220 (471)
T PRK10504 159 E---YASWHWIFLIN-IPV-GIIGAIATL--MLM-PNYTM---QTRRFD---LSGF--LLLAVGMATLTLALDGSKGL-- 220 (471)
T ss_pred h---hccHHHHHHHH-HHH-HHHHHHHHH--HhC-CCccc---cCCCCC---hHHH--HHHHHHHHHHHHHHhcCCcC--
Confidence 1 011 1122221 111 111111111 111 11110 011111 1111 11111111111111111100
Q ss_pred CCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCC
Q 009176 243 LPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHG 322 (541)
Q Consensus 243 ~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (541)
...........+.....++... .++. + .+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~----------------------~------------~~------- 249 (471)
T PRK10504 221 GLSPLAIAGLVAVGVVALLLYL----------LHAR----------------------N------------NN------- 249 (471)
T ss_pred CcchHHHHHHHHHHHHHHHHHH----------HHHh----------------------c------------CC-------
Confidence 0001000000000000000000 0000 0 00
Q ss_pred CCccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHh-hhcCCc--ccchhhhhhhcccccccccccc-hhhh
Q 009176 323 LGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAE-SRGCSG--TSSLVSLSSSFGFFGRLIPSLF-GYFF 398 (541)
Q Consensus 323 ~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~-slg~~~--~~~~Vsl~Si~N~~GRl~~G~~-s~~~ 398 (541)
++.-..+++++++|+......++......+...-..+..| .+|+++ .........+....++.+.|.+ |++
T Consensus 250 ----~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~- 324 (471)
T PRK10504 250 ----RALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF- 324 (471)
T ss_pred ----CCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 0011124788899998877666654332222222333444 356543 3344455555566677776765 333
Q ss_pred cccCCCCChhHHHHHHHHHHHHHHHHHhhcc--c-c-hhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhh
Q 009176 399 SRSKHMIPSPASIGALMAPMAGAFMLLLNET--N-V-ALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVAN 474 (541)
Q Consensus 399 ~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~--~-~-~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a 474 (541)
+|...+....+.+++..+++.... + . .+.+...+.|++.|..++...+++.+.+..++.|..+++..+.
T Consensus 325 -------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 397 (471)
T PRK10504 325 -------GYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMI 397 (471)
T ss_pred -------CchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHH
Confidence 333333333333343333332221 1 1 2344566778899988999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCC-CCCccccccccHHHHHHHHHHHHHHHHH
Q 009176 475 IPIGSFLFGYLAALVYHKEGHNA-HNGKCMGMACYRSTFILWGSFCLFGTFL 525 (541)
Q Consensus 475 ~~~Gs~l~~~laG~iyD~~~~~~-~~~~C~G~~CY~~tF~i~~~~~~~g~~l 525 (541)
.-+|..+++.++|.+.|..+..+ .+....-...+..+|...+.++++++++
T Consensus 398 ~~~g~~ig~~i~g~ll~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (471)
T PRK10504 398 MQLSMSIGVTIAGLLLGLFGQQHVSVDSGATHTVFMYTYLCMALIIALPALI 449 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888754321 1112211122555566655554444433
No 45
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.45 E-value=1.2e-12 Score=139.34 Aligned_cols=363 Identities=12% Similarity=-0.055 Sum_probs=215.0
Q ss_pred ccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHH-hhhccccchHH
Q 009176 28 NFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLF-LTHTISHLSYA 105 (541)
Q Consensus 28 ~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~-~~~~i~~~~~w 105 (541)
....+-|.+.+.++.|..|...+.....++..+ .++.|.+.||++++.++.++.+...+++.++... +. ...++|
T Consensus 35 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~ 111 (417)
T PRK10489 35 LLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL---PEPSLL 111 (417)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc---CCCcHH
Confidence 345566888888899999999999999999866 7899999999999999988888777777655432 22 123567
Q ss_pred HHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhH
Q 009176 106 HIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLL 184 (541)
Q Consensus 106 ~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~ 184 (541)
.+.+..++.|.+.+...++......+.+|+ +|+++.|+.-...+++..+=..+...+... .+-...|++ .....+
T Consensus 112 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~--~~~~~~~~~--~~~~~~ 187 (417)
T PRK10489 112 AIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA--GGVAWNYGL--AAAGTF 187 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH--HhhHHHHHH--HHHHHH
Confidence 766666777777665555555555578876 588888876555555444333333222200 000000000 000000
Q ss_pred hHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhcccccc
Q 009176 185 ACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPL 264 (541)
Q Consensus 185 v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~ 264 (541)
+++ ++++..|.
T Consensus 188 ~~~-----------------------------------------------------------------~~~~~l~~---- 198 (417)
T PRK10489 188 ITL-----------------------------------------------------------------LPLLRLPA---- 198 (417)
T ss_pred HHH-----------------------------------------------------------------HHHHhCCC----
Confidence 000 00000110
Q ss_pred ccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHH
Q 009176 265 GEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYF 344 (541)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf 344 (541)
. + +++ + ++ +++.+ ......+..++++.+|.++
T Consensus 199 --~-~-----------~~~---------------~-~~----------~~~~~--------~~~~~~~~~~~~~~~~~~~ 230 (417)
T PRK10489 199 --L-P-----------PPP---------------Q-PR----------EHPLR--------SLLAGFRFLLASPVVGGIA 230 (417)
T ss_pred --C-C-----------CCC---------------c-cc----------ccchH--------HHHHHHHHHHcChHHHHHH
Confidence 0 0 000 0 00 00000 0001234567778887776
Q ss_pred HHHHHhhcccceeecchHHHHhh-hcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHH
Q 009176 345 FVYFSGATLGLVFLNNLGQIAES-RGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGA 421 (541)
Q Consensus 345 ~~~~~g~g~Glm~I~n~g~i~~s-lg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~ 421 (541)
+...+....+ .+........+. +|++. .....++..+.+.+|++.+|.++|. . +|...+....+.++++
T Consensus 231 ~~~~~~~~~~-~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~---~----~~~~~l~~~~~~~~~~ 302 (417)
T PRK10489 231 LLGGLLTMAS-AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS---A----RPGLLMLLSTLGSFLA 302 (417)
T ss_pred HHHHHHHHHH-hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc---c----CcchHHHHHHHHHHHH
Confidence 5544432211 122233445555 67653 4456677788888888888877542 1 1222333333445555
Q ss_pred HHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCC
Q 009176 422 FMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNG 500 (541)
Q Consensus 422 ~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~ 500 (541)
++++....+ ..+.+...+.|+..|...+...+++.|.+..++.|+..|+......+|..+++.+.|.+.|.-+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g------ 376 (417)
T PRK10489 303 VGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT------ 376 (417)
T ss_pred HHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc------
Confidence 554444333 2345566778888777777778899999999999999999999999999999999999999865
Q ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009176 501 KCMGMACYRSTFILWGSFCLFGTFLALILYARTRK 535 (541)
Q Consensus 501 ~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~ 535 (541)
++.+|.+.+.+.++..++......++|+
T Consensus 377 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 377 -------PVASASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred -------hhhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 4777777766655544444444444443
No 46
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.45 E-value=2.3e-12 Score=138.78 Aligned_cols=416 Identities=10% Similarity=-0.033 Sum_probs=242.7
Q ss_pred ccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHH
Q 009176 28 NFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAH 106 (541)
Q Consensus 28 ~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~ 106 (541)
..+..-|++++.+|.|.+|...+..+..++..+ .++.|.+.||+++|.++.+|.+...++......+ ..+|.
T Consensus 20 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~~ 92 (485)
T TIGR00711 20 IVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA-------PNLEL 92 (485)
T ss_pred HHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc-------CCHHH
Confidence 345678999999999999999999999999866 7889999999999999999999888887665422 24677
Q ss_pred HHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHh
Q 009176 107 IFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLA 185 (541)
Q Consensus 107 l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v 185 (541)
+.+..++.|.+.+...+.+...-.+.+|+ +||.+.|+.-....+++.+-..+...+.. ...-...+.......++
T Consensus 93 l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----~~~w~~~f~~~~~~~~~ 168 (485)
T TIGR00711 93 MIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE----NYHWRWIFLINVPIGII 168 (485)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc----CcCceehhhhhhHHHHH
Confidence 78888888998887777777666789975 79999999888888877776666655541 11112222222222222
Q ss_pred HhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhH-HHHHHHHhhhcccccc
Q 009176 186 CVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKN-LIGIVICLLAPLVIPL 264 (541)
Q Consensus 186 ~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~Pl~ip~ 264 (541)
.++...+..+. +++ +++++............+...+......+.... ....... ........+... .
T Consensus 169 ~~~~~~~~~~~-~~~-------~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~- 236 (485)
T TIGR00711 169 VVVVAFFILPR-DKP-------AASENFDFLGLLLLSVGLGSLLYGLSEGPERGW-FDSNEILILSITGLVAIIAF--V- 236 (485)
T ss_pred HHHHHHHHcCC-ccc-------cccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCC-CCchHHHHHHHHHHHHHHHH--H-
Confidence 22222222221 111 111111111110111111111111000000000 0000000 000000000000 0
Q ss_pred ccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHH
Q 009176 265 GEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYF 344 (541)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf 344 (541)
.+ + ... ++.....+++++++||...
T Consensus 237 ---~~-----------------------------~--------------~~~---------~~~~~~~~~~~~~~~~~~~ 261 (485)
T TIGR00711 237 ---VW-----------------------------E--------------LTD---------DNPLVDLRLFKYRNFTIGC 261 (485)
T ss_pred ---HH-----------------------------H--------------HcC---------CCCccCHHHHcCCChHHHH
Confidence 00 0 000 0011124678888888876
Q ss_pred HHHHHhhcccceeecchHHHHhh-hcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHH
Q 009176 345 FVYFSGATLGLVFLNNLGQIAES-RGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGA 421 (541)
Q Consensus 345 ~~~~~g~g~Glm~I~n~g~i~~s-lg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~ 421 (541)
+..++....-......+.+..+. .|++ +.....+...+...+|++++|.+.|. .+|...+......++++
T Consensus 262 ~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-------~~~~~~~~~g~~~~~~~ 334 (485)
T TIGR00711 262 VYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK-------IDPRKLVTIGLILYAVG 334 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------cCcHHHHHHHHHHHHHH
Confidence 65554332222222334445544 5665 34556667778888899998887332 13444444444555555
Q ss_pred HHHHh--hcc--c-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCC
Q 009176 422 FMLLL--NET--N-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHN 496 (541)
Q Consensus 422 ~ll~~--~~~--~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~ 496 (541)
.+++. ... + ..++....+.|+++|..+......+.+.++.++.|+..|+..+...+|+.+++.++|.++|++...
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~~~~ 414 (485)
T TIGR00711 335 FYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNRTQF 414 (485)
T ss_pred HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54443 111 2 235556778999999988777788888899999999999999999999999998999888743210
Q ss_pred ---------C-C-CCc--c------------------c-------cccccHHHHHHHHHHHHHHHHHHHH
Q 009176 497 ---------A-H-NGK--C------------------M-------GMACYRSTFILWGSFCLFGTFLALI 528 (541)
Q Consensus 497 ---------~-~-~~~--C------------------~-------G~~CY~~tF~i~~~~~~~g~~lsl~ 528 (541)
. . ... . . =...|+..|++.+.+++++.+++++
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~f~~~~~~~~~~~~~~~~ 484 (485)
T TIGR00711 415 HHSQLTETINPVNPNFLSGYSQLAALGNPEQQVYALIAQQITLHAFSIAINEIFWMATLLFVSGLILIWF 484 (485)
T ss_pred HHHHHHhhcCCCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 0 000 0 0 1336788899888888888887764
No 47
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.44 E-value=1.1e-13 Score=141.19 Aligned_cols=326 Identities=19% Similarity=0.157 Sum_probs=203.6
Q ss_pred cccchH-HHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHH
Q 009176 29 FPAYSS-QLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAH 106 (541)
Q Consensus 29 f~~ys~-~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~ 106 (541)
+...-| .+++++|+|.+|.+.+..+..++..+ +++.|.+.||+|+|.++.+|.+...++......+ .++|.
T Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-------~~~~~ 87 (352)
T PF07690_consen 15 ISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA-------SNFWL 87 (352)
T ss_dssp HHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH-------CCHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh-------hhHHH
Confidence 333445 88999999999999999999998855 9999999999999999999999999994444422 23577
Q ss_pred HHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHh
Q 009176 107 IFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLA 185 (541)
Q Consensus 107 l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v 185 (541)
+.+..++.|.+.+..+++....-.+.+|+ +|+.+.|+.-...+++..+-..+...+.. .-+-..-....+....+.
T Consensus 88 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~~~~~~~~~~~~~~~~~ 164 (352)
T PF07690_consen 88 LLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS---YFGWRWAFLISAILSLIA 164 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HCHHCCHHHHHHHHHHHH
T ss_pred Hhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh---ccccccccccccchhhhh
Confidence 88889999999988888888888899998 89999999999999988877777665541 011111111112111111
Q ss_pred HhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccccccc
Q 009176 186 CVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPLG 265 (541)
Q Consensus 186 ~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~~ 265 (541)
.+...+..+. ++++ ++ ++
T Consensus 165 -~il~~~~~~~-~~~~-----~~-~~------------------------------------------------------ 182 (352)
T PF07690_consen 165 -AILFILFLPE-PPPP-----RE-RE------------------------------------------------------ 182 (352)
T ss_dssp -HHHHHCCC----STT-----TT---------------------------------------------------------
T ss_pred -hhhHhhhhhh-cccc-----cc-cc------------------------------------------------------
Confidence 1111011111 0000 00 00
Q ss_pred cchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccC--CHHhhhhchhHHHH
Q 009176 266 EKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEI--GAMLMLQRVDFWLY 343 (541)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--t~~q~l~~~~Fwll 343 (541)
+++ +++.+. +.+. .+++..+++.+|.+
T Consensus 183 ---------------------------------~~~-----------~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 211 (352)
T PF07690_consen 183 ---------------------------------SPK-----------ESESKK-------PKPLKPGFKSLFKNPVLWIL 211 (352)
T ss_dssp ---------------------------------SST-----------TTT--H-------HHCCCH-CTHHHHHHCCHHH
T ss_pred ---------------------------------ccc-----------cccccc-------ccccccccccccccchhhhh
Confidence 000 000000 0001 34677788888844
Q ss_pred HHHHHHhhcccceeecchHHH-HhhhcCC-c--ccchhhhhhhcccccccccccchhhhcccCCCCChhH-HHH-HHHHH
Q 009176 344 FFVYFSGATLGLVFLNNLGQI-AESRGCS-G--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPA-SIG-ALMAP 417 (541)
Q Consensus 344 f~~~~~g~g~Glm~I~n~g~i-~~slg~~-~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~-~l~-~~~~~ 417 (541)
+....+....-......+... .+.+|.+ . .....++..+....+++..|.+.|.. + +|.. .+. ....+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-----~~~~~~~~~~~~~~ 285 (352)
T PF07690_consen 212 LIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-G-----RRRRLLIAILLLIL 285 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T-----CHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C-----cHHHHHHHHHHHHH
Confidence 444444321211223333333 3456666 2 33457777888888899888774432 1 1222 221 12222
Q ss_pred HHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHH
Q 009176 418 MAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFG 483 (541)
Q Consensus 418 ~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~ 483 (541)
..+.........+ ...++...+.|+++|..++...+.+.|.++.++.|+.+|+..+...+|+.++|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 286 GALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 2222222222222 34666788999999999999999999999999999999999999999988875
No 48
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.43 E-value=3.2e-12 Score=132.19 Aligned_cols=125 Identities=20% Similarity=0.147 Sum_probs=95.4
Q ss_pred cCCccccccchHH-HHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009176 23 NGTNSNFPAYSSQ-LKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTIS 100 (541)
Q Consensus 23 ~Gt~Y~f~~ys~~-lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~ 100 (541)
..+.|.++.+-|+ +++.+|+|.+|...+.....+|..+ .++.|.+.||+|+|.++.+|.+...++.......-.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~---- 89 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQ---- 89 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhh----
Confidence 4455789999996 9999999999999999999999866 899999999999999999999999998876654321
Q ss_pred cchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHH
Q 009176 101 HLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKL 154 (541)
Q Consensus 101 ~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaai 154 (541)
++|.+.+..++.|.+.... +.+.....+.||+ +||.+.++..+...++..+
T Consensus 90 --~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 141 (366)
T TIGR00886 90 --SYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGV 141 (366)
T ss_pred --hHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHH
Confidence 4566666666666664432 3444444578875 7999999876554444433
No 49
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.41 E-value=4.7e-12 Score=137.83 Aligned_cols=377 Identities=13% Similarity=0.095 Sum_probs=218.4
Q ss_pred CccccccchHHHHH-HhCCChhhHHHHHHhhhhhcccc-hhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009176 25 TNSNFPAYSSQLKQ-LLSLSQLQLNNLAFASDAGKLFG-WISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHL 102 (541)
Q Consensus 25 t~Y~f~~ys~~lk~-~l~~sq~~l~~l~~~~~~G~~~G-~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~ 102 (541)
.-+.+|.-.+.+++ .+|+|.+|+..+...-.++..++ ++.|.++||+|+|.++.++.+...++....-.+++... .
T Consensus 49 ~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~--~ 126 (462)
T PRK15034 49 VWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPN--T 126 (462)
T ss_pred HHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccC--C
Confidence 34567777888876 79999999999988888877775 99999999999999999999998888876666555432 4
Q ss_pred hHHHHHHHHHHhccccccccceeeeeecccCCCC-CceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchh
Q 009176 103 SYAHIFLLTVLAGNSICWINTVCYVVTIKNFPFD-RQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIF 181 (541)
Q Consensus 103 ~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~-RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~ 181 (541)
++|.+.+.-++.|.+.. ...+++...-+.||++ ||++.|+.-+. |-.|...+++..-.
T Consensus 127 s~~~lli~r~l~Gigg~-~f~~~~~~vs~wfp~~~rG~A~Gi~~g~-G~~G~~l~~~l~p~------------------- 185 (462)
T PRK15034 127 PFGIFIVIALLCGFAGA-NFASSMGNISFFFPKAKQGSALGINGGL-GNLGVSVMQLVAPL------------------- 185 (462)
T ss_pred CHHHHHHHHHHHHHHHH-hHHHHHHHHHHHCCHhHhHHHHHHHHHH-HhhHHHHHHHHHHH-------------------
Confidence 68888888888888733 4445555555779975 99999998644 43444444332211
Q ss_pred hhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccc
Q 009176 182 PLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLV 261 (541)
Q Consensus 182 p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ 261 (541)
++.+. .....|..... ....+...... ... .|..... .+ +++..++.+
T Consensus 186 --~i~~~---l~~~~G~~~~~----~~~g~~~~~~~---~~~---~~~~~~i--------------v~-~i~~~~~~~-- 233 (462)
T PRK15034 186 --VIFVP---VFAFLGVNGVP----QADGSVMSLAN---AAW---IWVPLLA--------------IA-TIAAWSGMN-- 233 (462)
T ss_pred --HHHHH---HHHHhcccccc----ccccchHHHHH---HHH---HHHHHHH--------------HH-HHHHHHhCC--
Confidence 11000 00001111100 00001111110 000 0100000 00 000000000
Q ss_pred cccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHH
Q 009176 262 IPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFW 341 (541)
Q Consensus 262 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fw 341 (541)
|++ +++.+ . ...++.+|+++-|
T Consensus 234 ------------------------~~~-------------------------~~~~~-------~--~~~~~vlk~~~~W 255 (462)
T PRK15034 234 ------------------------DIA-------------------------SSRAS-------I--ADQLPVLQRLHLW 255 (462)
T ss_pred ------------------------Ccc-------------------------ccccC-------H--HHHHHHhCCCchh
Confidence 000 00000 0 1246789999999
Q ss_pred HHHHHHHHhhcccceeecchHHHHhhhcCCccc--chhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHH
Q 009176 342 LYFFVYFSGATLGLVFLNNLGQIAESRGCSGTS--SLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMA 419 (541)
Q Consensus 342 llf~~~~~g~g~Glm~I~n~g~i~~slg~~~~~--~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~ 419 (541)
++-+.+++.-|+=...-+-+++..++ .+++.. ....+.++...++|.++|+++|.. . +|... ....+.+.
T Consensus 256 llslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRi---G---~~~vl-~~~~i~~~ 327 (462)
T PRK15034 256 LLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKF---G---GVRVT-LINFIFMA 327 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhc---C---chHHH-HHHHHHHH
Confidence 98777766544322122233333333 233222 223445677889999999995532 1 23322 22222222
Q ss_pred HHH-H-HHhhcc----cchhHH-----HHHHHHHhhhccchhhHHHhhh--hcCC---------------Ccccchhhhh
Q 009176 420 GAF-M-LLLNET----NVALYT-----STAIIGVCSGAITSISVTTTTE--LFGT---------------KNFSVNHNIV 471 (541)
Q Consensus 420 ~~~-l-l~~~~~----~~~l~~-----~s~liG~~yG~~~~l~P~ivse--~FG~---------------k~fg~nyg~~ 471 (541)
+.. . .+..+. +..++. .....|++-|+.|-+.|.+-.+ .-.. |+-|.-=|++
T Consensus 328 i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v 407 (462)
T PRK15034 328 IFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFI 407 (462)
T ss_pred HHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHH
Confidence 221 1 111221 112222 2233466666777666665542 1111 2677888888
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009176 472 VANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTR 534 (541)
Q Consensus 472 ~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r 534 (541)
...-++|+++.|++.|..+|.+++ |..+|++..+.+++.++++.+.+.|+.
T Consensus 408 ~a~G~~Ggf~~p~~~g~~~~~~g~------------~~~~~~~~~~~~~~~~~~~w~~y~r~~ 458 (462)
T PRK15034 408 SAIGAVGGFFIPQAFGMSLNMTGS------------PVGAMKVFLIFYIVCVLLTWLVYGRRK 458 (462)
T ss_pred HHHHHcccchhhHHHHHHHHHcCC------------cHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 899999999999999999999998 999999999999999999988877664
No 50
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.40 E-value=1.9e-11 Score=126.66 Aligned_cols=175 Identities=11% Similarity=0.127 Sum_probs=112.6
Q ss_pred hhhchhHHHHHHHHHHhhcccceeecchHHHH-hhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHH
Q 009176 334 MLQRVDFWLYFFVYFSGATLGLVFLNNLGQIA-ESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPAS 410 (541)
Q Consensus 334 ~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~-~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~ 410 (541)
.++++++|.+++..++..+...++...+.... +.+|.++ .....++..+....+++.+|.+.|.. +|...
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-------g~~~~ 267 (375)
T TIGR00899 195 LLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-------GKRRL 267 (375)
T ss_pred hhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-------cchhH
Confidence 55677788776665544332222223333333 4456653 33455555566677888888774422 22233
Q ss_pred HHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHH
Q 009176 411 IGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALV 489 (541)
Q Consensus 411 l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~i 489 (541)
+....+...+..+++....+ ..+++...+.|+++|..++...+.+.|.+.. +.++..++......+|..+++.++|.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~ 346 (375)
T TIGR00899 268 MLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGIL 346 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33233333333333322223 3355566788999999888888999999864 568888988888889999999999999
Q ss_pred hhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 490 YHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 490 yD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
+|..+ |+..|.+.+.+++++.++.+.+
T Consensus 347 ~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 347 AERWS-------------YHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHhcc-------------chhHHHHHHHHHHHHHHHHhee
Confidence 98753 7999999999888888776543
No 51
>PRK10133 L-fucose transporter; Provisional
Probab=99.39 E-value=3.3e-11 Score=130.28 Aligned_cols=377 Identities=10% Similarity=0.056 Sum_probs=215.1
Q ss_pred cccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHH
Q 009176 27 SNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYA 105 (541)
Q Consensus 27 Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w 105 (541)
-.-+.+-|++|+.+|+|.+|...+..+..+|..+ .++.|.+.||+|+|.++.+|.+...+|..+...... ..++|
T Consensus 43 ~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~----a~~~~ 118 (438)
T PRK10133 43 NLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE----IMNYT 118 (438)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh----cCCHH
Confidence 3445678999999999999999999999999966 999999999999999999999999999876543221 23578
Q ss_pred HHHHHHHHhccccccccceeeeeecccCCCCCc-eehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhH
Q 009176 106 HIFLLTVLAGNSICWINTVCYVVTIKNFPFDRQ-VAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLL 184 (541)
Q Consensus 106 ~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~RG-~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~ 184 (541)
.+.+..++.|.|.+..++++-....+..|++|+ ...++.-+.+++++.+=..+...+.....+......+
T Consensus 119 ~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~--------- 189 (438)
T PRK10133 119 LFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVL--------- 189 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhh---------
Confidence 888888999999888777765554455666655 4678877777776655444433221000000000000
Q ss_pred hHhhccceeeeecCCCcccccccccccC-CcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccccc
Q 009176 185 ACVVTSPVVREIGDHVQESSSSSRRRTR-GGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIP 263 (541)
Q Consensus 185 v~l~~~~~ir~~~~~~~~~~~~~~~~~~-~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip 263 (541)
.+.. .... ...+..- ......|.... ++..+ .+++++..+ .|
T Consensus 190 --------~~l~-~~~~----~~w~~~~~~~w~~~f~~~~--~v~~~--------------------~~~~~~~~~--~p 232 (438)
T PRK10133 190 --------DKMT-PEQL----SAYKHSLVLSVQTPYMIIV--AIVLL--------------------VALLIMLTK--FP 232 (438)
T ss_pred --------hccC-hhhH----HHHHHHHHHHHHHHHHHHH--HHHHH--------------------HHHHHHHhc--CC
Confidence 0000 0000 0000000 00111110000 00000 000000000 00
Q ss_pred cccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHH
Q 009176 264 LGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLY 343 (541)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwll 343 (541)
+. + + ++++ +++..+ .-.+.++.+++++||..
T Consensus 233 -------------------~~---~----------~-~~~~--------~~~~~~--------~~~~~~~ll~~~~~~~~ 263 (438)
T PRK10133 233 -------------------AL---Q----------S-DNHS--------DAKQGS--------FSASLSRLARIRHWRWA 263 (438)
T ss_pred -------------------CC---C----------c-cccc--------cccccc--------hhhhHHHHHhCchHHHH
Confidence 00 0 0 0000 000000 00124578899999987
Q ss_pred HHHHHHhhcccceeecchHHH-Hh-hhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHH
Q 009176 344 FFVYFSGATLGLVFLNNLGQI-AE-SRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMA 419 (541)
Q Consensus 344 f~~~~~g~g~Glm~I~n~g~i-~~-slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~ 419 (541)
.+..++..+.-....+-.... -| ..|++ +.....+...+...+||+.+|.+.|.. +|...+.....+.+
T Consensus 264 ~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-------g~~~~l~~~~~~~~ 336 (438)
T PRK10133 264 VLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-------APHKVLAAYALIAM 336 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CHHHHHHHHHHHHH
Confidence 666555442211112222322 23 35665 456788899999999999999884322 33333333333333
Q ss_pred HHHHHHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCC
Q 009176 420 GAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHN 499 (541)
Q Consensus 420 ~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~ 499 (541)
+.+++.....+........+.|++.|..++..-+...|.+|. +-++-=+++.+.. +|+.+++.+.|.+.|..+.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~~~~-~g~~~~~~i~G~l~~~~g~---- 410 (438)
T PRK10133 337 ALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVMTI-IGGGIVTPVMGFVSDAAGN---- 410 (438)
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHhHHh-ccchHHHHHHHHHHHhccc----
Confidence 333333222222234466789999999999999999999985 4566666665433 6788889999999997653
Q ss_pred CccccccccHHHHHHHHHHHHHHH
Q 009176 500 GKCMGMACYRSTFILWGSFCLFGT 523 (541)
Q Consensus 500 ~~C~G~~CY~~tF~i~~~~~~~g~ 523 (541)
-+.+|++...+.+...
T Consensus 411 --------~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 411 --------IPTAELIPALCFAVIF 426 (438)
T ss_pred --------hHHHHHHHHHHHHHHH
Confidence 4788877655444333
No 52
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.38 E-value=1e-11 Score=135.94 Aligned_cols=120 Identities=13% Similarity=-0.039 Sum_probs=91.0
Q ss_pred HHHHHH-----hCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHH
Q 009176 34 SQLKQL-----LSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHI 107 (541)
Q Consensus 34 ~~lk~~-----l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l 107 (541)
+.+++. .+.+.++...+.....+|..+ .++.|.+.||+|+|.++.++.+...++-.+..++.... +...+|.+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~ 118 (502)
T TIGR00887 40 KMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSS-PKSVMATL 118 (502)
T ss_pred HHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcc-cchHHHHH
Confidence 555553 245667778888889999866 88899999999999999999888888766555443221 11236788
Q ss_pred HHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHH
Q 009176 108 FLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKL 154 (541)
Q Consensus 108 ~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaai 154 (541)
++.-++.|.+.+..++.+.....+.||. .||++.++.-....++..+
T Consensus 119 ~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~ 166 (502)
T TIGR00887 119 CFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILA 166 (502)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHH
Confidence 8888999999998888888888899997 6999999887766655433
No 53
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.37 E-value=1.8e-11 Score=126.43 Aligned_cols=364 Identities=14% Similarity=0.022 Sum_probs=199.9
Q ss_pred ccccccchHHHHHHhCC--ChhhHHHHHHhhh-----hhcc-cchhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhh
Q 009176 26 NSNFPAYSSQLKQLLSL--SQLQLNNLAFASD-----AGKL-FGWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTH 97 (541)
Q Consensus 26 ~Y~f~~ys~~lk~~l~~--sq~~l~~l~~~~~-----~G~~-~G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~ 97 (541)
.|.++..++.++++... +.++...+-.... ++.. .+++.|.+.||+|+|.++.+|.+...++......+-+-
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~ 88 (394)
T TIGR00883 9 FYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSY 88 (394)
T ss_pred HHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCCh
Confidence 45677788888988765 2333333322222 2222 36889999999999999999999999888777654322
Q ss_pred c-cccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchh
Q 009176 98 T-ISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYL 175 (541)
Q Consensus 98 ~-i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fL 175 (541)
. ......+.+++.-++.|.+.+...+++.....+.+|+ +||.+.++......++..+-..+...+..
T Consensus 89 ~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~----------- 157 (394)
T TIGR00883 89 ATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSY----------- 157 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 1 0111123466667888888877766666666688876 68888777655555544433333222110
Q ss_pred hhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHH
Q 009176 176 LFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVIC 255 (541)
Q Consensus 176 llla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~l 255 (541)
.. ... . .+...+...+.+..+. .++.
T Consensus 158 -------------------~~-~~~------~--~~~~~w~~~~~~~~~~--------------------------~~~~ 183 (394)
T TIGR00883 158 -------------------LL-GDD------A--LLEWGWRIPFLVSAVL--------------------------VLIG 183 (394)
T ss_pred -------------------hc-CHH------H--hhccchHHHHHHHHHH--------------------------HHHH
Confidence 00 000 0 0000111111110000 0000
Q ss_pred hhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhh
Q 009176 256 LLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLML 335 (541)
Q Consensus 256 l~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l 335 (541)
+.... .. ++ .++.+ +.++ +++ .+..+.++.+
T Consensus 184 ~~~~~--~~----~~---~~~~~-----------------~~~~--------------~~~---------~~~~~~~~~~ 214 (394)
T TIGR00883 184 LYLRR--NL----EE---TPVFE-----------------KAQE--------------KHK---------KKRGPIRETL 214 (394)
T ss_pred HHHHH--hc----CC---ChhHH-----------------HHHh--------------ccc---------cccCCHHHHH
Confidence 00000 00 00 00000 0000 000 0112345566
Q ss_pred hchh--HHHHHHHHHHhhcccceeecchHHHH-hhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHH
Q 009176 336 QRVD--FWLYFFVYFSGATLGLVFLNNLGQIA-ESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPAS 410 (541)
Q Consensus 336 ~~~~--Fwllf~~~~~g~g~Glm~I~n~g~i~-~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~ 410 (541)
+++. +|......++......+....+..+. +.+|.+ +.....++..+.+.++++..|.+.|... +|...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g------~~~~~ 288 (394)
T TIGR00883 215 TKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIG------RRPVL 288 (394)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc------hHHHH
Confidence 6655 77766665554333222333445555 345664 3445677788889999999888844321 22222
Q ss_pred HHHHHHHHHHHH-HHHhh--cccc-hhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhh-hhhhhhhHHHHHHH
Q 009176 411 IGALMAPMAGAF-MLLLN--ETNV-ALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIV-VANIPIGSFLFGYL 485 (541)
Q Consensus 411 l~~~~~~~~~~~-ll~~~--~~~~-~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~-~~a~~~Gs~l~~~l 485 (541)
+.........+. ++... ..+. .+++...+.|+++|..++...+.+.|.+..++-++.+|+. .++..+|+.++|.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~ 368 (394)
T TIGR00883 289 IIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYI 368 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHH
Confidence 222222122221 11111 1222 3445667889999999999999999999999999999984 46677888899999
Q ss_pred HHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHH
Q 009176 486 AALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLF 521 (541)
Q Consensus 486 aG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~ 521 (541)
.|.++|..+. ++..++.....+++
T Consensus 369 ~g~l~~~~g~------------~~~~~~~~~~~~l~ 392 (394)
T TIGR00883 369 AAALVAMTGD------------WYAIGYYLAALALI 392 (394)
T ss_pred HHHHHHHcCc------------chhHHHHHHHHHHH
Confidence 9999999876 56666666554443
No 54
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.37 E-value=1e-10 Score=123.31 Aligned_cols=173 Identities=8% Similarity=0.015 Sum_probs=123.2
Q ss_pred CHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCCh
Q 009176 330 GAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPS 407 (541)
Q Consensus 330 t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R 407 (541)
+.++.+|+++||.+.+..++..+.-..+.....+..++.|.++ .....++..+...++.+.+|.+ . +| .++
T Consensus 197 ~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l---~-~r---~g~ 269 (382)
T TIGR00902 197 AFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKL---F-QN---CSA 269 (382)
T ss_pred hHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHH---H-hh---CCH
Confidence 3578999999999988877765555455566666677788764 3344455555555555555433 2 11 144
Q ss_pred hHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhh-hhhhhhHHHHHHH
Q 009176 408 PASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVV-ANIPIGSFLFGYL 485 (541)
Q Consensus 408 ~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~-~a~~~Gs~l~~~l 485 (541)
...+.+..+...+..++.++..+ ..+++...+-|++||..+......+.+. ..++.++-.++.. ++.++|..+++.+
T Consensus 270 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~ 348 (382)
T TIGR00902 270 RDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAF 348 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566666666666665555 3467788999999999999999999998 7777788888865 6788999999999
Q ss_pred HHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHH
Q 009176 486 AALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTF 524 (541)
Q Consensus 486 aG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~ 524 (541)
+|++||+.+ + ..|.+++.+.+++++
T Consensus 349 ~G~l~~~~g-------------~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 349 AGFIYPTLG-------------A-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHhcc-------------H-HHHHHHHHHHHHHHH
Confidence 999999863 3 678888887776543
No 55
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.34 E-value=6.9e-11 Score=124.90 Aligned_cols=179 Identities=9% Similarity=0.087 Sum_probs=115.8
Q ss_pred CHHhhhhchhHHHHHHHHHHhhcccceeec-chHHHHhhh----cCC--cccchhhhhhhcccccccccccchhhhcccC
Q 009176 330 GAMLMLQRVDFWLYFFVYFSGATLGLVFLN-NLGQIAESR----GCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSK 402 (541)
Q Consensus 330 t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~-n~g~i~~sl----g~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~ 402 (541)
+.++.+|++++|.+.+..++. ....+... -.....+.. +.+ ......++..+.+..+.+..|.+.|..
T Consensus 207 ~~~~~l~~~~~~~~~l~~~~~-~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~---- 281 (396)
T TIGR00882 207 LALELFRQRKFWMFVLYVVGV-ACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI---- 281 (396)
T ss_pred HHHHHHcCCcHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 467899999998765544332 22222111 122222222 111 123455666677777777777663322
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhh-hhhhhhhhHH
Q 009176 403 HMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNI-VVANIPIGSF 480 (541)
Q Consensus 403 ~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~-~~~a~~~Gs~ 480 (541)
+|...+.+..+++++...+.....+ ..+++...+-|++++......-..+.|.++.+.-++.++. ...+..+|+.
T Consensus 282 ---g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~ 358 (396)
T TIGR00882 282 ---GAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMI 358 (396)
T ss_pred ---ccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHH
Confidence 3333344444444555444444333 4466677788888877777677778889999998888877 4577889999
Q ss_pred HHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 481 LFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 481 l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
+++.++|+++|..+ |+.+|++.+.+.+++.+++...
T Consensus 359 ~~~~l~G~l~~~~G-------------~~~~f~~~~~~~~i~~~~~~~~ 394 (396)
T TIGR00882 359 FLSTLAGNMYDSIG-------------FQGAYLVLGCIVLLFTLISVFT 394 (396)
T ss_pred HHHHhHHHHHHhcc-------------cHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999763 8999999999988888776543
No 56
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.34 E-value=9.7e-11 Score=128.30 Aligned_cols=378 Identities=12% Similarity=-0.020 Sum_probs=216.7
Q ss_pred cccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHH
Q 009176 29 FPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHI 107 (541)
Q Consensus 29 f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l 107 (541)
.+.=-|++.+.+|.|++|.+.+..+-.++... .++.|.+.|++|++.++.+|.+...+|..+.-.+ .++|++
T Consensus 25 v~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a-------~~~~~l 97 (495)
T PRK14995 25 LHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFS-------PTASWL 97 (495)
T ss_pred HHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHc-------CCHHHH
Confidence 34446899999999999999999999999854 7899999999999999999999888888765432 246777
Q ss_pred HHHHHHhccccccccceeeeeecccCC--CCCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhH-
Q 009176 108 FLLTVLAGNSICWINTVCYVVTIKNFP--FDRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLL- 184 (541)
Q Consensus 108 ~~~~~l~g~g~~~~nTa~lvt~v~NFP--~~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~- 184 (541)
.+.-++.|.|.+...++....-.+.|+ ++||++.|+.....+++..+=..+...+.. .-+ -...++ ...|..
T Consensus 98 i~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~---~~g-wr~~f~-i~~~~~~ 172 (495)
T PRK14995 98 IATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE---HFY-WGSVFL-INVPIVL 172 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cCC-hHHHHH-HHHHHHH
Confidence 887788888887655555544557884 479999999999999988777777666641 111 112222 222222
Q ss_pred hHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhcccccc
Q 009176 185 ACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPL 264 (541)
Q Consensus 185 v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~ 264 (541)
+.++......|. ++++ ++ ++..+... +....+..++...+.+.... ....... ..+ +.........
T Consensus 173 ~~~~l~~~~l~~-~~~~-----~~--~~~d~~g~--~~~~~~~~~l~~~~~~~~~~-~~~~~~~-~~~--~~~~~~~l~~ 238 (495)
T PRK14995 173 VVMGLTARYVPR-QAGR-----RD--QPLNLGHA--LMLIVAILLLVYSAKTALKG-FLSLWVT-SLT--LLTGALLLGL 238 (495)
T ss_pred HHHHHHHHhCCC-CCCC-----CC--CCCChHhH--HHHHHHHHHHHHHHHhcccc-CCchHHH-HHH--HHHHHHHHHH
Confidence 222222121121 1111 11 11111111 11111111111122111100 0001000 000 0000000000
Q ss_pred ccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHH
Q 009176 265 GEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYF 344 (541)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf 344 (541)
..+ . |.+ . ++..-..++++++.|+...
T Consensus 239 --f~~------~----e~~------------------------------~-----------~~p~~~~~lf~~~~~~~~~ 265 (495)
T PRK14995 239 --FIR------T----QLA------------------------------A-----------SRPMIDMRLFTHRIILSGV 265 (495)
T ss_pred --HHH------H----Hhc------------------------------C-----------CCCCcCHHHhCCcccHHHH
Confidence 000 0 000 0 0001115678888888776
Q ss_pred HHHHHhhcccceeecchHHHHhh-hcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHH
Q 009176 345 FVYFSGATLGLVFLNNLGQIAES-RGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGA 421 (541)
Q Consensus 345 ~~~~~g~g~Glm~I~n~g~i~~s-lg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~ 421 (541)
+..++....-......+.+.-|. .|++ ++.......++...++....|.+.|.. +|...+....++++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-------g~~~~~~~g~~~~~~~ 338 (495)
T PRK14995 266 VMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-------GLRLVATGGMALSALS 338 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CchHHHHHHHHHHHHH
Confidence 66555432211111222333343 5665 455667777888888999988874321 2223333334444444
Q ss_pred HHHHhhc---cc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhh
Q 009176 422 FMLLLNE---TN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHK 492 (541)
Q Consensus 422 ~ll~~~~---~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~ 492 (541)
.+++... .+ ...++..++.|+..|..+......+.+....++.+...++..+...+|+.+++.+.|.++|.
T Consensus 339 ~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 339 FYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4333221 12 23556778899999998888888888999999999999999999999999998888888764
No 57
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.33 E-value=7.4e-11 Score=140.77 Aligned_cols=369 Identities=13% Similarity=-0.007 Sum_probs=212.2
Q ss_pred ccchHHHHHHhCCChhh--HHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHH
Q 009176 30 PAYSSQLKQLLSLSQLQ--LNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAH 106 (541)
Q Consensus 30 ~~ys~~lk~~l~~sq~~--l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~ 106 (541)
....+.+...++.++++ ...+..+..++..+ ++++|.+.|++|++.++.++.+...++.....++... .++|.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~----~~~~~ 105 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYL----GWFWL 105 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHH----ccHHH
Confidence 44555666667776555 56667777777744 8999999999999999988877666665554433322 13688
Q ss_pred HHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHh
Q 009176 107 IFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLA 185 (541)
Q Consensus 107 l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v 185 (541)
+.+..++.|.+++...++....-.+.+|+ +||.+.|+.-....++..+=..+...+.. .
T Consensus 106 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~------~-------------- 165 (1146)
T PRK08633 106 AFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE------S-------------- 165 (1146)
T ss_pred HHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH------h--------------
Confidence 88888899999998888877777788986 69999998777666654444333333220 0
Q ss_pred HhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccccccc
Q 009176 186 CVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPLG 265 (541)
Q Consensus 186 ~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~~ 265 (541)
+ . ... .++ ....+.....+.+..+ .+.+++.+..|
T Consensus 166 ------~---~-~~~------~~~-~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~------ 200 (1146)
T PRK08633 166 ------V---N-GNT------PSE-ILGRIAPAGLVLLAVA----------------------VLGLIFAYRLP------ 200 (1146)
T ss_pred ------h---c-ccc------ccc-cccchHHHHHHHHHHH----------------------HHHHHHHhcCc------
Confidence 0 0 000 000 0000110000000000 00000000011
Q ss_pred cchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHHH
Q 009176 266 EKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYFF 345 (541)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf~ 345 (541)
+ . ++... ...+ + +.... .......++++++++.+|...+
T Consensus 201 ----~---~-------~~~~~---------~~~~-~-----------~~~~~------~~~~~~~~~~l~~~~~~~~~~~ 239 (1146)
T PRK08633 201 ----K---V-------PAAAP---------EVFD-K-----------KKYLF------PKLLWRNLKLLRSDRVLWLAII 239 (1146)
T ss_pred ----C---C-------CCCCc---------cccc-c-----------ccccc------HHHHHHHHHHHhcCcHHHHHHH
Confidence 0 0 00000 0000 0 00000 0001123567888899998877
Q ss_pred HHHHhhcccceeecchHHHHh-hhcCCcc---cchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHH
Q 009176 346 VYFSGATLGLVFLNNLGQIAE-SRGCSGT---SSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGA 421 (541)
Q Consensus 346 ~~~~g~g~Glm~I~n~g~i~~-slg~~~~---~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~ 421 (541)
..++......++...+....+ .+|.+.. ..+.++..+...+|.++.|.++|.. +|...+.+..+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-------~~~~~~~~~~~~~~~~ 312 (1146)
T PRK08633 240 GLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-------IELGLVPLGALGLALS 312 (1146)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------eEccchhHHHHHHHHH
Confidence 766665555444455555554 4566533 4566667777777877777764421 2222222333334444
Q ss_pred HHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCC
Q 009176 422 FMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNG 500 (541)
Q Consensus 422 ~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~ 500 (541)
.+++....+ ..+.+...++|+++|..+....+++.+.+..++-|+.+++..+...+|..+++.+.+.+....-.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~----- 387 (1146)
T PRK08633 313 LFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLS----- 387 (1146)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccC-----
Confidence 444433333 34566778999999999999999999999999999999999988888887766665555432222
Q ss_pred ccccccccHHHHHHHHHHHHHHHHHHH
Q 009176 501 KCMGMACYRSTFILWGSFCLFGTFLAL 527 (541)
Q Consensus 501 ~C~G~~CY~~tF~i~~~~~~~g~~lsl 527 (541)
+...|++.+.++++..++.+
T Consensus 388 -------~~~~~~~~~~~~~~~~~~~~ 407 (1146)
T PRK08633 388 -------PAGLFYLIALVTLIGTLYTL 407 (1146)
T ss_pred -------HHHHHHHHHHHHHHHHHHHH
Confidence 45667777666655554443
No 58
>PRK09952 shikimate transporter; Provisional
Probab=99.31 E-value=7.6e-11 Score=127.06 Aligned_cols=181 Identities=12% Similarity=0.063 Sum_probs=109.6
Q ss_pred hhhhchhHHHHHHHHHHhhcccce-eecchHHH-HhhhcCCccc--chhhhhhhcccccccccccchhhhcccCCCCChh
Q 009176 333 LMLQRVDFWLYFFVYFSGATLGLV-FLNNLGQI-AESRGCSGTS--SLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSP 408 (541)
Q Consensus 333 q~l~~~~Fwllf~~~~~g~g~Glm-~I~n~g~i-~~slg~~~~~--~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~ 408 (541)
+.++++.+|.+-+...+....+.- ........ .+.+|+++.. ....+..+...+|+++.|+++|.. +|.
T Consensus 244 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-------grr 316 (438)
T PRK09952 244 ALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-------GRR 316 (438)
T ss_pred HHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------Cch
Confidence 466777777764433222222211 12222222 2345665321 223345566778888888885533 222
Q ss_pred HHHHHHHHHHHHHHHHH--hh-ccc-ch-hHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhh-hhhhhhHHHH
Q 009176 409 ASIGALMAPMAGAFMLL--LN-ETN-VA-LYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVV-ANIPIGSFLF 482 (541)
Q Consensus 409 ~~l~~~~~~~~~~~ll~--~~-~~~-~~-l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~-~a~~~Gs~l~ 482 (541)
..+....++++++.+.+ .. ..+ .. +.+...+.|+++|..++..+++++|.|+.|+-++-.|+.+ ++..+|+.+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~ 396 (438)
T PRK09952 317 RVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFT 396 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHH
Confidence 22222222223322211 11 112 22 3334556689999999999999999999998888888754 4556888889
Q ss_pred HHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHh
Q 009176 483 GYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYA 531 (541)
Q Consensus 483 ~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~ 531 (541)
|.+.|+++|..+.. |+..|.+.+++++++.+..+.+..
T Consensus 397 p~i~g~l~~~~~~~-----------~~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 397 PFIAAALVTYFGGS-----------WHSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHhcCCC-----------chHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999976432 889999998888888887766543
No 59
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.31 E-value=1.6e-10 Score=121.73 Aligned_cols=121 Identities=14% Similarity=0.001 Sum_probs=91.7
Q ss_pred CccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 009176 25 TNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLS 103 (541)
Q Consensus 25 t~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~ 103 (541)
+.+.+..+-|++++.+|+|.++...+.....+|..+ .++.|.+.||+|+|.++.+|.+...+++.....+ .+
T Consensus 18 ~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~-------~~ 90 (392)
T PRK10473 18 GIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA-------ET 90 (392)
T ss_pred HHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh-------Cc
Confidence 344455889999999999999999888888888866 6899999999999999999999988888776532 23
Q ss_pred HHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHH
Q 009176 104 YAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSA 152 (541)
Q Consensus 104 ~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSa 152 (541)
+|.+.+.-++.|.+.+.....+.....+.+|+ +|+++.|+.-+...+++
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~ 140 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIP 140 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 46666666677777766555555555577865 79999887655444443
No 60
>PRK11043 putative transporter; Provisional
Probab=99.29 E-value=1.4e-10 Score=122.57 Aligned_cols=138 Identities=15% Similarity=0.037 Sum_probs=93.0
Q ss_pred hHHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHH
Q 009176 9 QWLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIG 87 (541)
Q Consensus 9 rw~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~G 87 (541)
.|+.+..++...+...+.+.|...-|++++.+|.|.+|...+..+..+|..+ +++.|.+.||+++|.++.+|.+...++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 84 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG 84 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH
Confidence 5555555555555555555555555778999999999999999999999866 899999999999999999998888777
Q ss_pred HHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCCC-CceehhhHHHhhhhHHH
Q 009176 88 YGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPFD-RQVAVGITSSYLGLSAK 153 (541)
Q Consensus 88 Y~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~-RG~a~gllk~~~GLSaa 153 (541)
....... .++|.+++..++.|.+.+...........+.||++ |+.+.+..-...+++++
T Consensus 85 ~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (401)
T PRK11043 85 SLGMLWV-------ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPA 144 (401)
T ss_pred HHHHHHh-------cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 6655431 24577777777767665433222211223668775 45444444333334333
No 61
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.29 E-value=1.3e-10 Score=122.51 Aligned_cols=111 Identities=10% Similarity=0.033 Sum_probs=79.5
Q ss_pred ccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchH
Q 009176 26 NSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSY 104 (541)
Q Consensus 26 ~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~ 104 (541)
.+.+...-|++.+.+|+|..|...+..+..++..+ .++.|.+.||+++|.++.+|.+...++....... .++
T Consensus 24 ~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~-------~~~ 96 (394)
T PRK11652 24 QTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA-------HSL 96 (394)
T ss_pred HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-------ccH
Confidence 33444445788999999999999999999999866 7999999999999999999988888877665432 245
Q ss_pred HHHHHHHHHhccccccccceeeeeecccCCC-CCceehhh
Q 009176 105 AHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGI 143 (541)
Q Consensus 105 w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gl 143 (541)
|.+++..++.|.+.+.....+.....+.+|+ +|+.+.++
T Consensus 97 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (394)
T PRK11652 97 TVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSL 136 (394)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 7777777888877664333322222344554 45555443
No 62
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.29 E-value=3e-10 Score=121.92 Aligned_cols=185 Identities=11% Similarity=0.061 Sum_probs=106.7
Q ss_pred CHHhhhhchhHHHHHHHHHHhhcccce-eecchHHHHh-hhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCC
Q 009176 330 GAMLMLQRVDFWLYFFVYFSGATLGLV-FLNNLGQIAE-SRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMI 405 (541)
Q Consensus 330 t~~q~l~~~~Fwllf~~~~~g~g~Glm-~I~n~g~i~~-slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~ 405 (541)
+.+++++++.+|++.+.+.+....+.. ...-+.+..+ ..|++. .....++..+...+++...|++.|...
T Consensus 234 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~g------ 307 (432)
T PRK10406 234 SLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIG------ 307 (432)
T ss_pred cHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------
Confidence 467888999999877666554322222 2233455443 467653 345566667777788888888754321
Q ss_pred ChhHHHHHHHHHHHHH---HHH-Hhhcccchh-HHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhh-hhhhH
Q 009176 406 PSPASIGALMAPMAGA---FML-LLNETNVAL-YTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVAN-IPIGS 479 (541)
Q Consensus 406 ~R~~~l~~~~~~~~~~---~ll-~~~~~~~~l-~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a-~~~Gs 479 (541)
+|...+ ...++.++. .+. .....+... .....+.+++.|...+..++.++|+|..|+-++-+|+.+.. ..+.+
T Consensus 308 rr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g 386 (432)
T PRK10406 308 RRTSML-CFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFG 386 (432)
T ss_pred chHHHH-HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHH
Confidence 122222 221111111 111 111112121 12223334455556677889999999999999999998743 33323
Q ss_pred HHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009176 480 FLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTR 534 (541)
Q Consensus 480 ~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r 534 (541)
-..|.+.+ +.|..+. |...|+..++.++++.+..+.+..|.|
T Consensus 387 ~~~p~~~~-~l~~~g~------------~~~~~~~~~~~~~i~~~~~~~l~~~~~ 428 (432)
T PRK10406 387 GSAEYVAL-SLKSIGM------------ETAFFWYVTLMAVVAFLVSLMLHRKGK 428 (432)
T ss_pred hHHHHHHH-HHHHhCC------------CcHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 33566677 4476666 777788888888888777776555444
No 63
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.28 E-value=1.7e-10 Score=124.39 Aligned_cols=130 Identities=12% Similarity=0.016 Sum_probs=94.3
Q ss_pred Cccccccch---HHHHHHh--------CCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHH
Q 009176 25 TNSNFPAYS---SQLKQLL--------SLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQY 92 (541)
Q Consensus 25 t~Y~f~~ys---~~lk~~l--------~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~ 92 (541)
-.|..+.++ +.+++.+ +++..|...+.....+|..+ .++.|.+.||+|+|.+++++.+...++.....
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~ 103 (479)
T PRK10077 24 FGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSA 103 (479)
T ss_pred cCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 345555555 5567776 88999999999999999966 89999999999999999999998887776655
Q ss_pred HHh----hhcccc-chHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHH
Q 009176 93 LFL----THTISH-LSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKL 154 (541)
Q Consensus 93 l~~----~~~i~~-~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaai 154 (541)
++- .-..++ ..++.+.++=++.|.+.+.....+...-.+.+|+ +||.+.|+.-....++..+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~ 171 (479)
T PRK10077 104 WPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLV 171 (479)
T ss_pred hhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHH
Confidence 421 100011 1234455666788888887666666666688986 6999999876666555544
No 64
>PRK15075 citrate-proton symporter; Provisional
Probab=99.27 E-value=6.3e-10 Score=119.49 Aligned_cols=147 Identities=11% Similarity=-0.049 Sum_probs=93.1
Q ss_pred CCCccchhHHHHHHHHHHH-HhcCC-ccccccchHHHHHHhCCChhhHHHHH-Hhhhhhc-----cc-chhhhhhccccc
Q 009176 2 PLNSNILQWLSLVGAIWLQ-SINGT-NSNFPAYSSQLKQLLSLSQLQLNNLA-FASDAGK-----LF-GWISGVASVYLP 72 (541)
Q Consensus 2 ~~~~~~~rw~~l~as~~v~-~~~Gt-~Y~f~~ys~~lk~~l~~sq~~l~~l~-~~~~~G~-----~~-G~~~Gll~d~~p 72 (541)
|-.++-+||.. .++.++. ....- ...++.+.|++++.++.+++|...+. .....+. -+ .++.|.+.||+|
T Consensus 6 ~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~G 84 (434)
T PRK15075 6 PAASRESKARA-ILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVG 84 (434)
T ss_pred CCCCcchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhc
Confidence 44456677874 4444443 22221 23478899999999999988865442 2222222 23 578899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccch---HHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhh
Q 009176 73 LWLVLLIGSTLGLIGYGLQYLFLTHTISHLS---YAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYL 148 (541)
Q Consensus 73 p~~vlliGa~~~~~GY~~~~l~~~~~i~~~~---~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~ 148 (541)
+|.++.++.+...++....-. ........ .+++++.-++.|.+.+...+++.....+.+|+ +||++.++.....
T Consensus 85 rr~~l~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~ 162 (434)
T PRK15075 85 RRKGLIVTLSIMASGTLLIAF--VPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQ 162 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHH
Confidence 999999998877777555432 11111000 11356667788888877666665566688986 6999998765544
Q ss_pred hhH
Q 009176 149 GLS 151 (541)
Q Consensus 149 GLS 151 (541)
.++
T Consensus 163 ~~g 165 (434)
T PRK15075 163 QVA 165 (434)
T ss_pred HHH
Confidence 333
No 65
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.26 E-value=2.5e-10 Score=124.85 Aligned_cols=159 Identities=11% Similarity=0.011 Sum_probs=99.3
Q ss_pred chHHHHh-hhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHH-HHHHHH--HHhhccc-ch
Q 009176 360 NLGQIAE-SRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAP-MAGAFM--LLLNETN-VA 432 (541)
Q Consensus 360 n~g~i~~-slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~-~~~~~l--l~~~~~~-~~ 432 (541)
-+.++.+ .+|++. .....+...+...+|++.+|.++|.. +|...+....+. .+.+.. ......+ ..
T Consensus 272 ~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-------grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (490)
T PRK10642 272 YMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-------GRRPFVILGSVALFVLAIPAFILINSNVIGL 344 (490)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 3444443 457653 33455566677888999988885532 344433332221 222221 1222222 34
Q ss_pred hHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHH
Q 009176 433 LYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTF 512 (541)
Q Consensus 433 l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF 512 (541)
++++..+.|+++|..++..++++.|+|..+.-|+-.|+.+....+++.++|.+.|++.|..++ .+..+
T Consensus 345 ~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~------------~~~~~ 412 (490)
T PRK10642 345 IFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQN------------LMMPA 412 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------chHHH
Confidence 556667889999999999999999999999988888875433445567778899999987665 45566
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccc
Q 009176 513 ILWGSFCLFGTFLALILYARTRKFY 537 (541)
Q Consensus 513 ~i~~~~~~~g~~lsl~l~~r~r~~Y 537 (541)
.+....++++.+..+++..+.|+.+
T Consensus 413 ~~~~~~~~i~~~~~~~~pes~~~~~ 437 (490)
T PRK10642 413 YYLMVVAVIGLITGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHHHHHhccccCCCC
Confidence 5666667777766665533333334
No 66
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.26 E-value=3e-10 Score=119.74 Aligned_cols=172 Identities=9% Similarity=-0.032 Sum_probs=110.4
Q ss_pred CHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCCh
Q 009176 330 GAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPS 407 (541)
Q Consensus 330 t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R 407 (541)
+.++.+|++.||.+.+..++....-..+.+......++.|+++ .....++..+.+..+++..|...| | .++
T Consensus 197 ~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~---r----~~~ 269 (382)
T PRK11128 197 AWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFR---R----WSA 269 (382)
T ss_pred hHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHH---H----CCH
Confidence 4689999999998876655543222223334445556667653 344555555555556555554422 1 245
Q ss_pred hHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhh-hhhhhhHHHHHHH
Q 009176 408 PASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVV-ANIPIGSFLFGYL 485 (541)
Q Consensus 408 ~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~-~a~~~Gs~l~~~l 485 (541)
...+....+.++++.+++....+ ..+++..++.|+++|......-..+.+.- .++.++.+++.. .+..+|..+++.+
T Consensus 270 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~ig~~i 348 (382)
T PRK11128 270 RDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAARP-GSEVIRLQALYSALAMGGSIAIMTVL 348 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555666666655554444 34666788899999987777777777764 555688888775 6667788899999
Q ss_pred HHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHH
Q 009176 486 AALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGT 523 (541)
Q Consensus 486 aG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~ 523 (541)
+|++||+.+. ..|++++++.++++
T Consensus 349 ~G~l~~~~g~--------------~~~~~~~~~~~~~~ 372 (382)
T PRK11128 349 SGFLYQHLGA--------------GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHhccH--------------HHHHHHHHHHHHHH
Confidence 9999998642 36776666655443
No 67
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.23 E-value=2.2e-10 Score=119.26 Aligned_cols=125 Identities=11% Similarity=0.011 Sum_probs=96.4
Q ss_pred cccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHH
Q 009176 27 SNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYA 105 (541)
Q Consensus 27 Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w 105 (541)
..+...-|++++.+|+|.+|...+..+..+|..+ .++.|.+.||++++.++.+|.+...++....... ..+|
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~-------~~~~ 80 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA-------QTID 80 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-------ccHH
Confidence 3445566788899999999999999999998866 8999999999999999999998888887776542 2356
Q ss_pred HHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHH
Q 009176 106 HIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSA 158 (541)
Q Consensus 106 ~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i 158 (541)
.+.+..++.|.+.+..+........+.+|+ +||++.|+.-...++++.+-..+
T Consensus 81 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 134 (377)
T PRK11102 81 QLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPII 134 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677777788888777666655556678886 59999998766666655544433
No 68
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.19 E-value=4.6e-10 Score=134.56 Aligned_cols=378 Identities=10% Similarity=-0.074 Sum_probs=217.7
Q ss_pred hhHHHHHHHHHHHHhcCCccccc--cch-HHHHHHhCCChhhH-HHHHHhhhhhc-ccchhhhhhccccchHHHHH--HH
Q 009176 8 LQWLSLVGAIWLQSINGTNSNFP--AYS-SQLKQLLSLSQLQL-NNLAFASDAGK-LFGWISGVASVYLPLWLVLL--IG 80 (541)
Q Consensus 8 ~rw~~l~as~~v~~~~Gt~Y~f~--~ys-~~lk~~l~~sq~~l-~~l~~~~~~G~-~~G~~~Gll~d~~pp~~vll--iG 80 (541)
+||.-+..+-++...+-..+.+. .+. .++....+.++.++ ..+..+.-++. .+++++|.+.||++++.++. ..
T Consensus 11 ~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~ 90 (1140)
T PRK06814 11 RRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKF 90 (1140)
T ss_pred cccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHH
Confidence 44555555554444332223222 111 23444444444443 44444555665 45999999999999876531 12
Q ss_pred HHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHH
Q 009176 81 STLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAV 159 (541)
Q Consensus 81 a~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~ 159 (541)
+...+.+.... .... .++|++.+..++.|.+++++..+....-...||+ .|+.+.|+.-....++..+-..+.
T Consensus 91 ~~~~~~~~~~~-~~~~-----~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~ 164 (1140)
T PRK06814 91 AEIGIAALAIY-GFHL-----NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIG 164 (1140)
T ss_pred HHHHHHHHHHH-HHHH-----hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHH
Confidence 22222222221 1111 2578899999999999998888777777788877 689999998888888777776666
Q ss_pred HHHhcCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccc
Q 009176 160 NAIETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKL 239 (541)
Q Consensus 160 ~~~~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~ 239 (541)
..+.. ..+...++ ..+....++.++...+++.. + +
T Consensus 165 g~l~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~------~-------------------------------- 199 (1140)
T PRK06814 165 GLATI---SGNFVILV-ALLMGIAVLGWLASLFIPKT---G------N-------------------------------- 199 (1140)
T ss_pred HHHHh---ccccHHHH-HHHHHHHHHHHHHHhhCCCC---C------C--------------------------------
Confidence 55541 00111111 11111111111111000000 0 0
Q ss_pred cCCCCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCc
Q 009176 240 KTLLPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGI 319 (541)
Q Consensus 240 ~~~~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (541)
.+. + .+ .+.+.
T Consensus 200 ---------------------------------------------~~~-----------~-~~---------~~~~~--- 210 (1140)
T PRK06814 200 ---------------------------------------------AAP-----------D-LK---------IDRNI--- 210 (1140)
T ss_pred ---------------------------------------------CCC-----------C-Ce---------eccch---
Confidence 000 0 00 00000
Q ss_pred cCCCCccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhh-hcCC--cccchhhhhhhcccccccccccchh
Q 009176 320 YHGLGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAES-RGCS--GTSSLVSLSSSFGFFGRLIPSLFGY 396 (541)
Q Consensus 320 ~~~~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~s-lg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~ 396 (541)
....-..++...+++.+|.+.+.+++....+.++...+..+.+. +|.+ ......+..++...+|.++.|.+.+
T Consensus 211 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~ 286 (1140)
T PRK06814 211 ----IRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSE 286 (1140)
T ss_pred ----HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 00000135677788899998887776655544444456666654 5664 3566788888889999999887743
Q ss_pred hhcccCCCCChhHHHHHHHHHHHHHHHHHhhc--------------------cc-chhHHHHHHHHHhhhccchhhHHHh
Q 009176 397 FFSRSKHMIPSPASIGALMAPMAGAFMLLLNE--------------------TN-VALYTSTAIIGVCSGAITSISVTTT 455 (541)
Q Consensus 397 ~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~--------------------~~-~~l~~~s~liG~~yG~~~~l~P~iv 455 (541)
-.. .+....... +.+++..+.+... .+ ..+++..+++|++.|......++++
T Consensus 287 ~~~------~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 359 (1140)
T PRK06814 287 GRI------TLLYVPIGA-LLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAAL 359 (1140)
T ss_pred Cce------eeeeehHHH-HHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 211 111111111 1111111111110 22 3456677889999999999999999
Q ss_pred hhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHH
Q 009176 456 TELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALI 528 (541)
Q Consensus 456 se~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~ 528 (541)
.+.+..++.|..+|+..+...+|..+++.+.|.++|...+ +...|++.+.++++.+++.+.
T Consensus 360 ~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 420 (1140)
T PRK06814 360 QAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFS------------IPWIILFIALANLIVAILILR 420 (1140)
T ss_pred HhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccC------------HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987665 777777776665555544433
No 69
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.14 E-value=1.4e-09 Score=115.34 Aligned_cols=357 Identities=20% Similarity=0.166 Sum_probs=222.2
Q ss_pred cccccchHHHHHHhCCChhhHHHHHHhh-hhhcccchhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHH
Q 009176 27 SNFPAYSSQLKQLLSLSQLQLNNLAFAS-DAGKLFGWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYA 105 (541)
Q Consensus 27 Y~f~~ys~~lk~~l~~sq~~l~~l~~~~-~~G~~~G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w 105 (541)
+.+|.-.+++|+.+|+|..|...+...- -.|..+=++-|++.|++|||.+-.++.+...+=-.++-.+.+. +++|
T Consensus 31 ~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~----~~~~ 106 (417)
T COG2223 31 TLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTY----PSTW 106 (417)
T ss_pred HHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccC----CchH
Confidence 4567788999999999999998875544 4666779999999999999999888887766654444444433 4568
Q ss_pred HHHHHHHHhccccccccceeeeeec-ccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhh
Q 009176 106 HIFLLTVLAGNSICWINTVCYVVTI-KNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPL 183 (541)
Q Consensus 106 ~l~~~~~l~g~g~~~~nTa~lvt~v-~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~ 183 (541)
++-++-++.|.+.+ |=++-.+++ +.||+ ++|+|.||-- .|=.|.-.+|+.. |.
T Consensus 107 ~ll~~gll~G~~Ga--sFav~m~~~s~~fP~~~qG~AlGI~g--~GN~G~av~q~~~---------------------P~ 161 (417)
T COG2223 107 QLLVIGLLLGLAGA--SFAVGMPNASFFFPKEKQGLALGIAG--AGNLGVAVAQLVA---------------------PL 161 (417)
T ss_pred HHHHHHHHHhcccc--eehcccccccccCChhhhhHHHHHhc--cccccHHHHHHHH---------------------HH
Confidence 87777777776554 224444444 78887 5799999744 5555555555432 22
Q ss_pred HhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccccc
Q 009176 184 LACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIP 263 (541)
Q Consensus 184 ~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip 263 (541)
++...+.-..| .+..+|+....+. .++..+.
T Consensus 162 v~~~~g~~~w~----------------------------~~~~i~~~~l~v~----------------~v~~~~~----- 192 (417)
T COG2223 162 VAVAFGFLAWR----------------------------NVAGIYVVALAIA----------------AVLAWLG----- 192 (417)
T ss_pred HHHHHhhHHHH----------------------------HHHHHHHHHHHHH----------------HHHHHHH-----
Confidence 21111100000 0011111110000 0000000
Q ss_pred cccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHH
Q 009176 264 LGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLY 343 (541)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwll 343 (541)
. +|.+ +.+ .... + . .+...+.+.+++|=|.+
T Consensus 193 ----~----------------~d~p----------~~r-----------~~~~-~-----~--~~~~~~~v~~~~~~W~l 223 (417)
T COG2223 193 ----M----------------NDVP----------EHR-----------ASVK-P-----Q--LPAQLKAVFSNKDTWLL 223 (417)
T ss_pred ----h----------------CCCh----------hhh-----------cccc-c-----c--chhHHHHHhcCcchHHH
Confidence 0 0000 000 0000 0 0 00234567778899999
Q ss_pred HHHHHHhhcccceeecchHHHHhh-hcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHH
Q 009176 344 FFVYFSGATLGLVFLNNLGQIAES-RGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAG 420 (541)
Q Consensus 344 f~~~~~g~g~Glm~I~n~g~i~~s-lg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~ 420 (541)
-+.|+..-|+=+-..+-+++.-+. .|.++ +....++...-+.+-|-.+|+++|-. + +|..++ +.++.|++
T Consensus 224 sllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-----G-g~rv~~-~~f~~~~~ 296 (417)
T COG2223 224 SLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-----G-GRRVTL-AVFVGMAL 296 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-----c-chhHHH-HHHHHHHH
Confidence 888877666544445556666554 45553 34788899999999999999995532 1 344433 34444555
Q ss_pred HHHHHhhc-------ccch-h----HHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHH
Q 009176 421 AFMLLLNE-------TNVA-L----YTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAAL 488 (541)
Q Consensus 421 ~~ll~~~~-------~~~~-l----~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~ 488 (541)
+..++... .+.. . .......|+.=|+.|-..|.+=.+ +.|.-=|++...-++|++..|+..|.
T Consensus 297 ~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-----~~G~v~G~vga~G~lGGf~lp~~~g~ 371 (417)
T COG2223 297 AAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-----ETGAVTGIVGAIGGLGGFFLPLAFGV 371 (417)
T ss_pred HHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-----hhhHHHHHHHHhccccccchhHHHHH
Confidence 54333322 1211 2 223345556666777777777665 78888899999999999999999999
Q ss_pred HhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009176 489 VYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTR 534 (541)
Q Consensus 489 iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r 534 (541)
.||.+++ |+..|++....++++.++...++.|.|
T Consensus 372 ~~~~tg~------------~~~~f~~~~~~~~~a~v~~~~~y~r~~ 405 (417)
T COG2223 372 SLDLTGS------------YTGAFMLLLAFYLVALVLTWALYARRR 405 (417)
T ss_pred HHHhccc------------HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999998 999999999999999999998888865
No 70
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.10 E-value=8.5e-09 Score=109.23 Aligned_cols=149 Identities=12% Similarity=0.111 Sum_probs=97.1
Q ss_pred chHHHH-hhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHH
Q 009176 360 NLGQIA-ESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYT 435 (541)
Q Consensus 360 n~g~i~-~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~ 435 (541)
...... +.+|+++ .....++..+....|+++.|.+.|.. +|...+........+.........+ ..+.+
T Consensus 238 ~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 310 (393)
T PRK15011 238 NMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-------GKRFLMRVAAVAGVCFYAGMLMAHSPAILLG 310 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ChHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 344333 3466653 34556666666777899988874432 2222222222222222222222222 23444
Q ss_pred HHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHH
Q 009176 436 STAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILW 515 (541)
Q Consensus 436 ~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~ 515 (541)
...+.++++|..++..++...|.+. ++-|+..++......+|..+++.+.|.++|..+ |+..|.+.
T Consensus 311 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-------------~~~~~~~~ 376 (393)
T PRK15011 311 LQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-------------YHAVFWFA 376 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------hHHHHHHH
Confidence 5566778888888888999999997 568999998888888999999999999999753 79999988
Q ss_pred HHHHHHHHHHHHHH
Q 009176 516 GSFCLFGTFLALIL 529 (541)
Q Consensus 516 ~~~~~~g~~lsl~l 529 (541)
+.+++++.++.+.+
T Consensus 377 ~~~~~~~~~~~~~~ 390 (393)
T PRK15011 377 LVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHhh
Confidence 88887777665544
No 71
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.10 E-value=2.2e-09 Score=117.92 Aligned_cols=179 Identities=15% Similarity=0.151 Sum_probs=109.8
Q ss_pred HHhhhhchhHHHHHHHHHHhhcccceeec-chHHH-HhhhcCCcc--cchhh-hhhhcccccccccccchhhhcccCCCC
Q 009176 331 AMLMLQRVDFWLYFFVYFSGATLGLVFLN-NLGQI-AESRGCSGT--SSLVS-LSSSFGFFGRLIPSLFGYFFSRSKHMI 405 (541)
Q Consensus 331 ~~q~l~~~~Fwllf~~~~~g~g~Glm~I~-n~g~i-~~slg~~~~--~~~Vs-l~Si~N~~GRl~~G~~s~~~~~~~~~~ 405 (541)
.++.++++++|.+.+...+- ..+....+ -..+. .+..|++.. ....+ +..+...+|.+++|.+.|..
T Consensus 215 l~~~~~~~~~~~~ll~~~l~-~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~------- 286 (491)
T PRK11010 215 LRDFFGRNNAWLILLLIVLY-KLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL------- 286 (491)
T ss_pred HHHHHcCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 45677788888765544322 12221111 12223 345677533 33333 33467778999999884432
Q ss_pred ChhHHHHHHHHHHHH---HHHHHhhcc-cc-hhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHH
Q 009176 406 PSPASIGALMAPMAG---AFMLLLNET-NV-ALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSF 480 (541)
Q Consensus 406 ~R~~~l~~~~~~~~~---~~ll~~~~~-~~-~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~ 480 (541)
+|...+.+..+.+++ .+.+++... +. .+.+...+..+++|..++.+.+...|+...+.-++-||+++....+|..
T Consensus 287 g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~ 366 (491)
T PRK11010 287 SLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRV 366 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHH
Confidence 222222221222222 222223322 22 2344455656666666666777777777777778999999988899999
Q ss_pred HHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 481 LFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 481 l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
+.+.++|+++|..+ |+..|.+.+.+++++.++...++
T Consensus 367 ~~~~~~G~l~~~~G-------------~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 367 YVGPVAGWFVEAHG-------------WPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHhC-------------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 99889999999753 89999999999999988887663
No 72
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.06 E-value=6.5e-09 Score=110.34 Aligned_cols=184 Identities=11% Similarity=0.100 Sum_probs=107.2
Q ss_pred CHHhhhhchhHHHHHHHHHHhhcccce-eecchHHHHhhhcCCcc--cchhhhhhh-cccccccccccchhhhcccCCCC
Q 009176 330 GAMLMLQRVDFWLYFFVYFSGATLGLV-FLNNLGQIAESRGCSGT--SSLVSLSSS-FGFFGRLIPSLFGYFFSRSKHMI 405 (541)
Q Consensus 330 t~~q~l~~~~Fwllf~~~~~g~g~Glm-~I~n~g~i~~slg~~~~--~~~Vsl~Si-~N~~GRl~~G~~s~~~~~~~~~~ 405 (541)
+.++.+++++||.+.+..++....... ...+...+.+..|++.. ....+..++ ...+|.+.+|.+.|..
T Consensus 201 ~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~------- 273 (402)
T PRK11902 201 PLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL------- 273 (402)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-------
Confidence 357889999999877665543322111 11122234455676533 333333333 4667777878774322
Q ss_pred ChhHHHHHHHHHHHHH---HHHHhhc-ccc-hhHHHH----HHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhh
Q 009176 406 PSPASIGALMAPMAGA---FMLLLNE-TNV-ALYTST----AIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIP 476 (541)
Q Consensus 406 ~R~~~l~~~~~~~~~~---~ll~~~~-~~~-~l~~~s----~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~ 476 (541)
+|...+....+...+. +.+++.. .+. .+++.. ...|+.++..+.++..++.+.++.++++ +......
T Consensus 274 g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 349 (402)
T PRK11902 274 GLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYA----LLSALAS 349 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH----HHHHHHH
Confidence 2222222222222222 2222332 222 233333 3456678888999999999999977654 4444446
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 009176 477 IGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRKFYS 538 (541)
Q Consensus 477 ~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~~Y~ 538 (541)
+|..+++.++|.++|+-+ |+..|.+.+.+++++.++..-...+.|| |+
T Consensus 350 l~~~~~~~~~G~l~~~~G-------------~~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~ 397 (402)
T PRK11902 350 VGRVYVGPTSGYLVEAYG-------------WPGFYLMTVVIALPGLALLWLMRGTIGR-YE 397 (402)
T ss_pred HHHHHHHHHHHHHHHHhC-------------hHHHHHHHHHHHHHHHHHHHHHhhhccc-cc
Confidence 777777778999999865 7999999998888887766555444444 44
No 73
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.05 E-value=2.6e-08 Score=105.40 Aligned_cols=364 Identities=14% Similarity=0.116 Sum_probs=240.3
Q ss_pred ccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHH
Q 009176 30 PAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIF 108 (541)
Q Consensus 30 ~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~ 108 (541)
.+-=|++|+.+++|+.|...+-++.-.|=-+ ++|+|++.+|++.+..+.+|-....+|-.+.|=+-+.+ .|-..+
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~----~y~~FL 108 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSK----SYGFFL 108 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhh----hHHHHH
Confidence 4567999999999999999999998877744 99999999999999999999999999999999776664 233345
Q ss_pred HHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHhHh
Q 009176 109 LLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLACV 187 (541)
Q Consensus 109 ~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v~l 187 (541)
..+|+.|.|.+...|++-.--..+.|+ +.-.=..+.-+++||.+.+--.+-..+.- ++ +.
T Consensus 109 ~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil---s~----------~~------ 169 (422)
T COG0738 109 VALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL---SG----------VA------ 169 (422)
T ss_pred HHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH---hh----------hh------
Confidence 567889999999999987777788877 33334688899999999998888877651 11 00
Q ss_pred hccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccccccccc
Q 009176 188 VTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPLGEK 267 (541)
Q Consensus 188 ~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~~~~ 267 (541)
.-. +++ +.......+ ..++ ..++..+.+.++++..- +..
T Consensus 170 ------~~~-~~~----------~~~~~~~~~-----------~~~v--------~~pYl~~~~~lvll~v~----~~~- 208 (422)
T COG0738 170 ------LTM-SAA----------QILAIKGAD-----------ASSV--------QFPYLILAGLLVLLAVL----ILL- 208 (422)
T ss_pred ------hcc-CHH----------HHHHHHHHH-----------HHhh--------hhHHHHHHHHHHHHHHH----HHh-
Confidence 000 110 000000000 0000 11233332333222221 000
Q ss_pred hhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHHHHH
Q 009176 268 IRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYFFVY 347 (541)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf~~~ 347 (541)
.|.++ .++++ ++..+ ++|.+..++++++.+|+--+..
T Consensus 209 --------------~k~p~-------------~~~~~--------~~~~~--------~~~~~~~~l~~~~~~~~gvl~~ 245 (422)
T COG0738 209 --------------SKLPD-------------LQVAA--------PSLGA--------SGSAGLSSLFQNKHLRLGVLAI 245 (422)
T ss_pred --------------ccCCc-------------CCccc--------ccccc--------cccchHHHHHhChHHHHHHHHH
Confidence 01100 00000 01111 1223788999999999999999
Q ss_pred HHhhcccceeecchHHHHhh-hcCC--cccchhhhhhhcccccccc-cccchhhhcccCCCCChhHHHHHHHHHHHHHHH
Q 009176 348 FSGATLGLVFLNNLGQIAES-RGCS--GTSSLVSLSSSFGFFGRLI-PSLFGYFFSRSKHMIPSPASIGALMAPMAGAFM 423 (541)
Q Consensus 348 ~~g~g~Glm~I~n~g~i~~s-lg~~--~~~~~Vsl~Si~N~~GRl~-~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~l 423 (541)
+|=.|.=.+.=+-+.+..+. .|.+ +++..+|..=.+=..||+. .+...++- -.|...+. ++.-..+ .+
T Consensus 246 FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~------~~k~Laf~-a~~~ill-~~ 317 (422)
T COG0738 246 FLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIK------PEKYLAFY-ALIAILL-LL 317 (422)
T ss_pred HHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------HHHHHHHH-HHHHHHH-HH
Confidence 99999888877777777776 5655 4567888888888899976 55556542 12333221 1111111 12
Q ss_pred HHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccc
Q 009176 424 LLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCM 503 (541)
Q Consensus 424 l~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~ 503 (541)
....+++.....+..++|+.-+..|+..-++..+..| +|=+.-=+++.++. +|+-+-|++.|++-|+.+.
T Consensus 318 ~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~mai-vGGAiiP~l~G~i~d~~g~-------- 387 (422)
T COG0738 318 AVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVMAI-VGGAIIPPLQGVIADMFGI-------- 387 (422)
T ss_pred HHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceeeeehe-ecchHHHHHHHHHHHhhhh--------
Confidence 2233444444446678999999999999999999999 77666666666655 7778889999999999886
Q ss_pred cccccHHHHHHHHHHHHHHH
Q 009176 504 GMACYRSTFILWGSFCLFGT 523 (541)
Q Consensus 504 G~~CY~~tF~i~~~~~~~g~ 523 (541)
..++.+...+|.+-+
T Consensus 388 -----~~~~~~~pllc~lyV 402 (422)
T COG0738 388 -----QLTFLIVPLLCYLYV 402 (422)
T ss_pred -----HHHHHHHHHHHHHHH
Confidence 677777777776655
No 74
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.03 E-value=1.7e-08 Score=107.42 Aligned_cols=157 Identities=13% Similarity=0.122 Sum_probs=100.4
Q ss_pred CHHhhhhchhHHHHHHHHHHhhcccceeecchHH-HHh-hhcCC-cccchhhhhhhcccccccccccchhhhcccCCCCC
Q 009176 330 GAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQ-IAE-SRGCS-GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIP 406 (541)
Q Consensus 330 t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~-i~~-slg~~-~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~ 406 (541)
..+++++++.||.+.+..++... +....+.... ..+ .++.+ ..+...++..+...+|.++.|.+.|.. +
T Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-------g 285 (437)
T TIGR00792 214 IFKALFKNDQLLILCLAYLFYNL-AFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKF-------G 285 (437)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHH-HHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------C
Confidence 35778899999998776655432 2221221111 111 11211 123344555677777887777764321 3
Q ss_pred hhHHHHHHHHHHHHHHHHHhhc-cc-chhHHHHHHHHHhhhccchhhHHHhhhh-------cCCCcccchhhhhhhhhhh
Q 009176 407 SPASIGALMAPMAGAFMLLLNE-TN-VALYTSTAIIGVCSGAITSISVTTTTEL-------FGTKNFSVNHNIVVANIPI 477 (541)
Q Consensus 407 R~~~l~~~~~~~~~~~ll~~~~-~~-~~l~~~s~liG~~yG~~~~l~P~ivse~-------FG~k~fg~nyg~~~~a~~~ 477 (541)
|...+....++++++.+++... .+ ..+++..++.|+++|..++...++++|. .|.++-|..+|+..+..-+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 365 (437)
T TIGR00792 286 RKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKL 365 (437)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHH
Confidence 3333333444445554444332 22 3455667788999999999999999987 4688899999999999999
Q ss_pred hHHHHHHHHHHHhhhcC
Q 009176 478 GSFLFGYLAALVYHKEG 494 (541)
Q Consensus 478 Gs~l~~~laG~iyD~~~ 494 (541)
|..+++.+.|.+.|..+
T Consensus 366 g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 366 GQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 99999999999998754
No 75
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.94 E-value=1.3e-08 Score=108.27 Aligned_cols=377 Identities=18% Similarity=0.167 Sum_probs=223.9
Q ss_pred ccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHH-----HHHHHHHHHHHHHhhhcccc
Q 009176 28 NFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGS-----TLGLIGYGLQYLFLTHTISH 101 (541)
Q Consensus 28 ~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa-----~~~~~GY~~~~l~~~~~i~~ 101 (541)
.|+.=.|.|++..++|.+|+..++.+..+.=.+ =+..|.+.||..||..+.+|- +..+.|..
T Consensus 47 nF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs------------ 114 (448)
T COG2271 47 NFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFS------------ 114 (448)
T ss_pred hHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhh------------
Confidence 578889999999999999999999988877655 578999999999987654443 33333432
Q ss_pred chHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHH--HHHhcCCCCCcccchhhhh
Q 009176 102 LSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAV--NAIETSSPNKRAKLYLLFN 178 (541)
Q Consensus 102 ~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~--~~~~~~~~~~d~~~fLlll 178 (541)
.++|++.++..+=|.=|+|.--+|-.+=.+.||+ .||+..++--...-+.|++-..+. ..+.. +.+-..=.
T Consensus 115 ~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~---~~~w~~~f--- 188 (448)
T COG2271 115 PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAF---HGGWRAAF--- 188 (448)
T ss_pred hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHh---ccchhHHH---
Confidence 2678888888998988988888999999999998 599999988877777777776665 22221 11111101
Q ss_pred chhhhHhHhhccc-eeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhh
Q 009176 179 SIFPLLACVVTSP-VVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLL 257 (541)
Q Consensus 179 a~~p~~v~l~~~~-~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 257 (541)
+.|++++++... ..+..+|.++ +.+
T Consensus 189 -~~pgiiaiival~~~~~~rd~Pq----------s~G------------------------------------------- 214 (448)
T COG2271 189 -YFPGIIAIIVALILLFLLRDRPQ----------SEG------------------------------------------- 214 (448)
T ss_pred -HHHHHHHHHHHHHHHHHhCCCcc----------ccC-------------------------------------------
Confidence 233333322211 1111101110 000
Q ss_pred hccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhc
Q 009176 258 APLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQR 337 (541)
Q Consensus 258 ~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~ 337 (541)
+| |+ +++++ |+.+.. ++ +++.+. .-..+.=.+-.|++
T Consensus 215 LP---~i--------e~~~~--------------d~~e~~-~~------------~~~~~~-----ls~~~i~~~YVL~N 251 (448)
T COG2271 215 LP---PI--------EEYRG--------------DPLEIY-EE------------EKENEG-----LTAWQIFVKYVLKN 251 (448)
T ss_pred CC---CH--------HHhhc--------------Cchhhh-hh------------hccCCC-----ccHHHHHHHHHHcC
Confidence 01 00 00000 000000 00 000000 00111233456788
Q ss_pred hhHHHHHHHHHHhhcccceeecchHHHH--hhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHH-
Q 009176 338 VDFWLYFFVYFSGATLGLVFLNNLGQIA--ESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIG- 412 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Glm~I~n~g~i~--~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~- 412 (541)
+--|++=++..+.--.= .-|+.=+++- |..|++ ++...++++=+....|-++.|++||..-| +|...+.
T Consensus 252 k~iW~la~a~vfvYivR-~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfk-----grR~p~~~ 325 (448)
T COG2271 252 KLIWLLALANVFVYVVR-YGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFK-----GRRGPMAL 325 (448)
T ss_pred hHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcc-----cccchHHH
Confidence 88898866554431100 0133444442 445664 57789999999999999999999776533 2332222
Q ss_pred HHHHHHHHHHHHHhhcccc--hhH-HHHHHHHH-hhhccchhhHHHhhhhcCCC-cccchhhhhhhhhhh-hHHHHHHHH
Q 009176 413 ALMAPMAGAFMLLLNETNV--ALY-TSTAIIGV-CSGAITSISVTTTTELFGTK-NFSVNHNIVVANIPI-GSFLFGYLA 486 (541)
Q Consensus 413 ~~~~~~~~~~ll~~~~~~~--~l~-~~s~liG~-~yG~~~~l~P~ivse~FG~k-~fg~nyg~~~~a~~~-Gs~l~~~la 486 (541)
+.++...++........+. .+. +.-.++|+ =||=+ ..-.+.+--|.+| --|+.=|+.-+..-+ |+...+...
T Consensus 326 i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPq--mLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~ 403 (448)
T COG2271 326 IFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQ--MLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPL 403 (448)
T ss_pred HHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHH--HHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcc
Confidence 2233333344444433322 333 34456776 46655 3344444445555 467888887755444 555556677
Q ss_pred HHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Q 009176 487 ALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRKFYSQR 540 (541)
Q Consensus 487 G~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~~Y~~~ 540 (541)
|++-|..+ ....|++..+.++++.++.+...++.++-++++
T Consensus 404 g~i~d~~g-------------W~g~Fi~~~~~a~l~~lll~~~~~~~~~~~~~~ 444 (448)
T COG2271 404 GYIADTWG-------------WDGGFIVLSIAALLAILLLLPVWNAEERKIRDE 444 (448)
T ss_pred eeeEecCC-------------CcchHHHHHHHHHHHHHHHHHHHhhcchhhhhh
Confidence 77777722 788999999999999988888877777777754
No 76
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.90 E-value=1.4e-08 Score=110.96 Aligned_cols=365 Identities=12% Similarity=0.111 Sum_probs=231.2
Q ss_pred HHHhCCChhhHHHHHHhhhhhcccch-hhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhc
Q 009176 37 KQLLSLSQLQLNNLAFASDAGKLFGW-ISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAG 115 (541)
Q Consensus 37 k~~l~~sq~~l~~l~~~~~~G~~~G~-~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g 115 (541)
+..+++|++|.+.|=-+...|..+|. |+|.++||+|.|.++.++.+...++-.+.=++.+. .+|.+++.=++-|
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~-----~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI-----GFYLLLVLRFLQG 139 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh-----cchhhHHHHHHhH
Confidence 67899999999999999999998855 55999999999999999999999998888777665 2356788888999
Q ss_pred cccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHhHhhccceee
Q 009176 116 NSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLACVVTSPVVR 194 (541)
Q Consensus 116 ~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir 194 (541)
.+++...++.-.-..|.+|. .|++..+++.+..-+|..+---+...+.. ++-+=++.|-++-. ...+.+++..++.+
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~-s~~GW~sifY~~g~-~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCE-SSLGWPSIFYVFGI-VGLIWFILWFLFYS 217 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc-cCCCCchHHHHHHH-HHHHHHHHHHHHhc
Confidence 99998888888888899987 79999999888774443332223333331 00011222222211 11111111111111
Q ss_pred eecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccccccccchhhhhhh
Q 009176 195 EIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPLGEKIRCFVED 274 (541)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~ 274 (541)
- .+
T Consensus 218 d---~P-------------------------------------------------------------------------- 220 (466)
T KOG2532|consen 218 D---SP-------------------------------------------------------------------------- 220 (466)
T ss_pred C---Cc--------------------------------------------------------------------------
Confidence 0 00
Q ss_pred hhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHHHHHHHhhccc
Q 009176 275 KRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYFFVYFSGATLG 354 (541)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~G 354 (541)
..++++++ +++.-++++. .++.. ..+++..++++++++.+|.+|+.-++..-.=
T Consensus 221 ----~~h~~is~-----~El~~I~~~k----------~~~~~-------~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~ 274 (466)
T KOG2532|consen 221 ----SKHPNISE-----KELKYIEKGK----------SEAHV-------KKKPPVPYKAILTSPPVWAIWISAFGGNWGF 274 (466)
T ss_pred ----ccCCCCCH-----HHHHHHHhcc----------ccccc-------CCCCCCCHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 00111100 0000011100 00000 0125678999999999999999998874333
Q ss_pred ceeecchHH-HHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCC----ChhHHHHHHHHHHHHHHHHHhh
Q 009176 355 LVFLNNLGQ-IAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMI----PSPASIGALMAPMAGAFMLLLN 427 (541)
Q Consensus 355 lm~I~n~g~-i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~----~R~~~l~~~~~~~~~~~ll~~~ 427 (541)
.+.+..+.. +-+-+|++ +...+.++=-+...+-++++|.++|.+.+| .+ -|..+-.+.+...++.++.+.+
T Consensus 275 ~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~--~ls~t~~rkifn~i~~~~~ai~l~~l~~ 352 (466)
T KOG2532|consen 275 YLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR--ILSETTVRKIFNTIAFGGPAVFLLVLAF 352 (466)
T ss_pred HHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc--cCchHhHHHHHHhHHHHHHHHHHHeeee
Confidence 333333333 33457775 667788888888999999999997766332 23 3444555666666666666665
Q ss_pred ccc--c--h---hHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHh-hhcCCCCCC
Q 009176 428 ETN--V--A---LYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVY-HKEGHNAHN 499 (541)
Q Consensus 428 ~~~--~--~---l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iy-D~~~~~~~~ 499 (541)
..+ . . +.++.++.|++.++..- ....--++|-+...|+......+++++.|.+.|.+- |.+.+.
T Consensus 353 ~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~-----~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~e--- 424 (466)
T KOG2532|consen 353 TSDEHRLLAVILLTIAIGLSGFNISGFYK-----NHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREE--- 424 (466)
T ss_pred cCCCcchHHHHHHHHHHHHcccchhhhHh-----hhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHH---
Confidence 542 2 1 22233444555554321 111127889999999999999999999999999887 331111
Q ss_pred CccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 500 GKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 500 ~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
.+..|++.+++.+++.++-.+.
T Consensus 425 --------W~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 425 --------WRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred --------HHHHHHHHHHHHHHhchheeEe
Confidence 8999999999998888554433
No 77
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.88 E-value=2.5e-07 Score=99.13 Aligned_cols=125 Identities=18% Similarity=0.181 Sum_probs=88.7
Q ss_pred CCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009176 24 GTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHL 102 (541)
Q Consensus 24 Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~ 102 (541)
-+...+..-=|++.+.+|.|+++.+..-...-+|..+ .++.|.+.||+|+|.++++|.+...++....-. . .
T Consensus 30 ~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~--a-----~ 102 (413)
T PRK15403 30 LTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF--T-----T 102 (413)
T ss_pred HHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH--c-----C
Confidence 3445555555678899999999999887777788755 789999999999999999887666665543322 1 2
Q ss_pred hHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHH
Q 009176 103 SYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLY 155 (541)
Q Consensus 103 ~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaif 155 (541)
++|++.+.-++.|.+.++..+.+.......||+ .|+.+.|+.-...+++..+-
T Consensus 103 ~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 156 (413)
T PRK15403 103 SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIG 156 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 457777777788887776555555444467787 47788887766666655443
No 78
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.78 E-value=1e-06 Score=97.20 Aligned_cols=129 Identities=16% Similarity=0.178 Sum_probs=89.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHhhccc----------chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhh
Q 009176 405 IPSPASIGALMAPMAGAFMLLLNETN----------VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVAN 474 (541)
Q Consensus 405 ~~R~~~l~~~~~~~~~~~ll~~~~~~----------~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a 474 (541)
.+.+..+.+.+++++++++.+..... ..+.+...+.|++-+...++..+++.+.--.+.-|.-.|+.+++
T Consensus 347 ~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~ 426 (500)
T PRK09584 347 LPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLT 426 (500)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 45555666667777777666543221 24666778999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 009176 475 IPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRKF 536 (541)
Q Consensus 475 ~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~~ 536 (541)
..+|+++++.+.+.+.......+....+.| |...|...+.++++..++.+++..+.+|.
T Consensus 427 ~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 427 TAGAALIAGYVANLMAVPDNVTDPLMSLEV---YGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred HHHHHHHHHHHHHHhccccccccchhhhhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888777755422111000001111 88999999888776666666655555553
No 79
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.77 E-value=2.8e-07 Score=97.23 Aligned_cols=175 Identities=10% Similarity=0.062 Sum_probs=112.5
Q ss_pred HHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCCc--ccchhhhhh-hcccccccccccchhhhcccCCCCCh
Q 009176 331 AMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCSG--TSSLVSLSS-SFGFFGRLIPSLFGYFFSRSKHMIPS 407 (541)
Q Consensus 331 ~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~~--~~~~Vsl~S-i~N~~GRl~~G~~s~~~~~~~~~~~R 407 (541)
.++.+|++.+|......++....-.....-.+...++.|++. .....++.. +...+|++.+|.+.|.. +|
T Consensus 201 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-------g~ 273 (390)
T TIGR02718 201 LFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-------GL 273 (390)
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-------hH
Confidence 578888898888776665554322222333445556678763 334444444 35567788877773322 33
Q ss_pred hHHHHHHHHHHHH-HHHHHh--h---ccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCC-CcccchhhhhhhhhhhhH
Q 009176 408 PASIGALMAPMAG-AFMLLL--N---ETN-VALYTSTAIIGVCSGAITSISVTTTTELFGT-KNFSVNHNIVVANIPIGS 479 (541)
Q Consensus 408 ~~~l~~~~~~~~~-~~ll~~--~---~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~-k~fg~nyg~~~~a~~~Gs 479 (541)
...+....++... ..+... . ..+ ..++....+.++++|..++.+.+.+.+..+. ++.++.+++......+|.
T Consensus 274 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~ 353 (390)
T TIGR02718 274 WRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGE 353 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHH
Confidence 3333222222211 111111 1 111 1233444555788999988888898888887 888999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHH
Q 009176 480 FLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFL 525 (541)
Q Consensus 480 ~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~l 525 (541)
.+++.++|.+||..+ |+..|.+.+.+++++.++
T Consensus 354 ~~g~~~~G~l~~~~G-------------~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 354 LIASSIAGYLTDRFG-------------YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHc-------------cHHHHHHHHHHHHHHHHH
Confidence 999999999999764 799999988877776544
No 80
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.75 E-value=7.2e-08 Score=100.06 Aligned_cols=122 Identities=7% Similarity=-0.121 Sum_probs=76.3
Q ss_pred hHHHHHHhCCChhhHHHHHHhhhhhcccchhhhhhcccc-----chHHH-HHHHHHHHHHHHHHHHHHhhhccccchHHH
Q 009176 33 SSQLKQLLSLSQLQLNNLAFASDAGKLFGWISGVASVYL-----PLWLV-LLIGSTLGLIGYGLQYLFLTHTISHLSYAH 106 (541)
Q Consensus 33 s~~lk~~l~~sq~~l~~l~~~~~~G~~~G~~~Gll~d~~-----pp~~v-lliGa~~~~~GY~~~~l~~~~~i~~~~~w~ 106 (541)
-|.+.+.+|+|.+|...++... +...++++.|.+.||+ |+|.. ++++.+...+....+... .. ...+|.
T Consensus 11 ~~~~~~~~g~s~~~~g~~~~~~-~~~~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~--~~--~~~l~~ 85 (356)
T TIGR00901 11 LPYWLRSKNVSLKTIGFFSLVG-LPYSLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL--VP--STDLPL 85 (356)
T ss_pred HHHHHHHcCCCHHHHHHHHHHH-HHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC--Cc--chhHHH
Confidence 4677888999999999987663 3334599999999998 44444 445555544443333222 11 234566
Q ss_pred HHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHH
Q 009176 107 IFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAV 159 (541)
Q Consensus 107 l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~ 159 (541)
+....++.+...+..+.+.-.-..+.+|+ +||.+.|+.-....++..+-..+.
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~ 139 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLA 139 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHH
Confidence 66665566665555544444444588865 799999877666665544444443
No 81
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.71 E-value=3.4e-07 Score=97.37 Aligned_cols=129 Identities=16% Similarity=0.101 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHH
Q 009176 11 LSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYG 89 (541)
Q Consensus 11 ~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~ 89 (541)
..+..+.++...+...+.+. .+.+.+.+|.++.+...+..+.-++..+ ++++|.+.||+++|.++.++.+...++-.
T Consensus 6 ~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~ 83 (393)
T PRK11195 6 YAIMAAQFFSALADNALLFA--AIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCL 83 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHH
Confidence 34555566655544444433 3456788899999999999888888855 99999999999999999888877766654
Q ss_pred HHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhH
Q 009176 90 LQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLS 151 (541)
Q Consensus 90 ~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLS 151 (541)
..... . ++ .+.-++.|.+.+....+....-.+.+|+ +|+++.|+.-....++
T Consensus 84 ~~~~~--~---~~-----~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~ 136 (393)
T PRK11195 84 LMLFG--I---HP-----LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAA 136 (393)
T ss_pred HHHHH--H---HH-----HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 43221 1 11 1223566888888777777777788986 6999999865554433
No 82
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.69 E-value=1e-07 Score=101.33 Aligned_cols=165 Identities=15% Similarity=0.164 Sum_probs=124.1
Q ss_pred hHHHHHHHHHHhhccc---ceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHH
Q 009176 339 DFWLYFFVYFSGATLG---LVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGA 413 (541)
Q Consensus 339 ~Fwllf~~~~~g~g~G---lm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~ 413 (541)
+.|.++...++....+ .+....+.++.+++|.+ +....+++..+...++++..|.+.|- ++|...+..
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-------~grr~~~~~ 90 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA-------TDRRYVVIL 90 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------cCcHHHHHH
Confidence 3444454444432222 22344577788888885 45678889999999999998877432 155566666
Q ss_pred HHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhh
Q 009176 414 LMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHK 492 (541)
Q Consensus 414 ~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~ 492 (541)
..++++++.++.....+ ..+++.-.+.|++.|..++..+++++|+|..|+.+...+++..+..+|..+++.+++.+.|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~ 170 (394)
T PRK10213 91 FAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL 170 (394)
T ss_pred HHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66666666666555544 46778889999999999999999999999999999999999999999999999999999886
Q ss_pred cCCCCCCCccccccccHHHHHHHHHHHHHHH
Q 009176 493 EGHNAHNGKCMGMACYRSTFILWGSFCLFGT 523 (541)
Q Consensus 493 ~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~ 523 (541)
.+ +|..|.+.+.++++..
T Consensus 171 ~g-------------w~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 171 IG-------------WRNVFNAAAVMGVLCI 188 (394)
T ss_pred cC-------------HHHHHHHHHHHHHHHH
Confidence 43 7999999877665543
No 83
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.68 E-value=1.1e-05 Score=88.46 Aligned_cols=125 Identities=12% Similarity=-0.054 Sum_probs=90.9
Q ss_pred chHHHHHH--hCCChhhHHHHHHhhhhhccc-chhhhhhccc-cchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHH
Q 009176 32 YSSQLKQL--LSLSQLQLNNLAFASDAGKLF-GWISGVASVY-LPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHI 107 (541)
Q Consensus 32 ys~~lk~~--l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~-~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l 107 (541)
...-+.++ +|+|++|...+-....++..+ .+++|.+.|| +|++.++++|.+...+|+..+.+.- .+|.+
T Consensus 33 L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~-------~~~~~ 105 (475)
T TIGR00924 33 LAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSI-------YPDLI 105 (475)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcc-------cHhHH
Confidence 33345666 999999999988888888766 8899999999 8999999999999999998776421 23555
Q ss_pred HHHHHHhccccccccceeeeeecccCCCC----CceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 108 FLLTVLAGNSICWINTVCYVVTIKNFPFD----RQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 108 ~~~~~l~g~g~~~~nTa~lvt~v~NFP~~----RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
.+...+.|.|.+.+..+.-....+.||++ |+++.++.-....+++++=..+...+.
T Consensus 106 ~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~ 165 (475)
T TIGR00924 106 FYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIA 165 (475)
T ss_pred HHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHH
Confidence 55666667777655554444445778753 888888777666676666555555554
No 84
>PRK10504 putative transporter; Provisional
Probab=98.63 E-value=1.4e-07 Score=101.97 Aligned_cols=175 Identities=12% Similarity=0.106 Sum_probs=132.6
Q ss_pred hhHHHHHHHHHHhhcccceeecchHHHHhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHH
Q 009176 338 VDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALM 415 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~ 415 (541)
+.+|++++.+++......++...+..+.+++|.+. ....++...+...++.+.+|.++|.. +|...+....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-------g~r~~~~~~~ 82 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-------GVRNIFFTAI 82 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------chHHHHHHHH
Confidence 46899988887765444445556888888898864 34566777777888888888885532 3333333444
Q ss_pred HHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcC
Q 009176 416 APMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEG 494 (541)
Q Consensus 416 ~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~ 494 (541)
++++++.++.....+ ..+++.-++.|++.|..++...+.++|.+..|+.++.+|+...+..+|..+++.+.|.+.|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~- 161 (471)
T PRK10504 83 VLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA- 161 (471)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc-
Confidence 445555444444444 456777889999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhh
Q 009176 495 HNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYAR 532 (541)
Q Consensus 495 ~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r 532 (541)
. |+..|.+...+++++.++......|
T Consensus 162 g------------w~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 162 S------------WHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred c------------HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3 8999999988888887777665444
No 85
>PRK09848 glucuronide transporter; Provisional
Probab=98.62 E-value=1.2e-06 Score=94.56 Aligned_cols=158 Identities=8% Similarity=0.046 Sum_probs=90.3
Q ss_pred HHhhhhchhHHHHHHHHHHhhcccceeecchHHHHh-hhcCCcccchhhhhhhcccccccccccc-hhhhcccCCCCChh
Q 009176 331 AMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAE-SRGCSGTSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSP 408 (541)
Q Consensus 331 ~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~-slg~~~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~ 408 (541)
.+++++++.|+.+.++.++....-...........+ .+|.+ .....++.+.+.++.+++..+ .++.+| .++.
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~r----~g~~ 294 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDT--GLFTVLVLVQNLVGTVASAPLVPGMVAR----IGKK 294 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCcH
Confidence 578999999998877666553221111111111112 12322 122223233334444443332 222211 1333
Q ss_pred HHHHHHHHHHHHHHHHHhhcc--c-chhHHHHHHHHHhhhccchhhHHHhhhhc-------CCCcccchhhhhhhhhhhh
Q 009176 409 ASIGALMAPMAGAFMLLLNET--N-VALYTSTAIIGVCSGAITSISVTTTTELF-------GTKNFSVNHNIVVANIPIG 478 (541)
Q Consensus 409 ~~l~~~~~~~~~~~ll~~~~~--~-~~l~~~s~liG~~yG~~~~l~P~ivse~F-------G~k~fg~nyg~~~~a~~~G 478 (541)
..+.+..++++++.+++.... + ..+++...+.|+..|..++...++++|.= |.++-|..+|+..+..-+|
T Consensus 295 ~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg 374 (448)
T PRK09848 295 NTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCG 374 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHH
Confidence 333334444555544443322 2 23445567889999998888888887754 6677899999999999999
Q ss_pred HHHHHHHHHHHhhhcC
Q 009176 479 SFLFGYLAALVYHKEG 494 (541)
Q Consensus 479 s~l~~~laG~iyD~~~ 494 (541)
.-+++.+.|.+.|..+
T Consensus 375 ~aig~~i~g~~l~~~G 390 (448)
T PRK09848 375 QAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 9999888888876544
No 86
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.62 E-value=3e-07 Score=95.49 Aligned_cols=172 Identities=13% Similarity=0.067 Sum_probs=127.1
Q ss_pred hhHHHHHHHHHHhhcccc-eeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHH
Q 009176 338 VDFWLYFFVYFSGATLGL-VFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGAL 414 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Gl-m~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~ 414 (541)
..++.....+.+..+.+. ++...+.++.+++|.+ +.....++..+.+.++.+..|.+.|.. +|...+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-------g~r~~~~~~ 76 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-------GRRPVLLLG 76 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-------CChHHHHHH
Confidence 344555444444444443 3444667788888885 456788888899999999999874422 333444444
Q ss_pred HHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhc
Q 009176 415 MAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKE 493 (541)
Q Consensus 415 ~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~ 493 (541)
.++.+++.++.....+ ..+++...+.|++.|...+..++++.|.+..++-+..+|+......+|..+++.++|.+.|..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 156 (385)
T TIGR00710 77 LFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL 156 (385)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5555555555555444 456777889999999999999999999999999999999999999999999999999998865
Q ss_pred CCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 494 GHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 494 ~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
+ ++.+|.+.+.++++..++..+.
T Consensus 157 ~-------------~~~~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 157 S-------------WHAIFAFLSLAGILLSALIFFI 179 (385)
T ss_pred C-------------HHHHHHHHHHHHHHHHHHHHHh
Confidence 3 7999999988877776665544
No 87
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.60 E-value=3.8e-10 Score=120.90 Aligned_cols=379 Identities=16% Similarity=0.130 Sum_probs=203.5
Q ss_pred ChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccc
Q 009176 43 SQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWI 121 (541)
Q Consensus 43 sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~ 121 (541)
++.+...+..+..+|..+ .++.|.+.||+|+|.++.++.++..+|-.+...+-+. ..+|.+++.-++.|.+.+..
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~R~~~G~~~g~~ 119 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY----NNFWMLLIGRFLIGFGIGGA 119 (451)
T ss_pred hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc----cccccccccccccccccccc
Confidence 556677888999999977 7899999999999999999999999887665544322 24577777778888887766
Q ss_pred cceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHhHhhccceeeeecCCC
Q 009176 122 NTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHV 200 (541)
Q Consensus 122 nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~ 200 (541)
.+.+.+-..+.=|+ +||....+.-....+...+-..+...+ ....+++.-..++.+...|.++.++...+ . |++
T Consensus 120 ~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~---~-pES 194 (451)
T PF00083_consen 120 YVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV-SYYSDNWGWRILLIFGAIPSLLVLLLRFF---L-PES 194 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccc---c-ccc
Confidence 66666666666665 799998887776654433222222222 10101123445555555666544443322 2 111
Q ss_pred cccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhc
Q 009176 201 QESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINR 280 (541)
Q Consensus 201 ~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~ 280 (541)
+..-....+.|+.. +.
T Consensus 195 P~wL~~~~~~~~A~-------------------------------------------------------~~--------- 210 (451)
T PF00083_consen 195 PRWLLSKGRDEEAE-------------------------------------------------------KV--------- 210 (451)
T ss_pred cceecccccccccc-------------------------------------------------------cc---------
Confidence 10000000000000 00
Q ss_pred ccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchh----HHHHHHHHHHhhcccce
Q 009176 281 VKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVD----FWLYFFVYFSGATLGLV 356 (541)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~----Fwllf~~~~~g~g~Glm 356 (541)
-.+.++.+.+++ +.+++.+ +.+. ..+++.+++++++++. +...+....+...+|..
T Consensus 211 l~~~~~~~~~~~---~~~~~~~----------~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~ 270 (451)
T PF00083_consen 211 LRKLRGKEIEDE---EIEEIKA----------EKKE-------SQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGIN 270 (451)
T ss_pred cccccccccccc---ccccccc----------cccc-------ccccceeeeeccccccccccccccccccccccccccc
Confidence 000000000000 0000000 0000 0011144455555533 22222222233345544
Q ss_pred eecc-hHHHHhhhcCCcccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHh-----hccc
Q 009176 357 FLNN-LGQIAESRGCSGTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLL-----NETN 430 (541)
Q Consensus 357 ~I~n-~g~i~~slg~~~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~-----~~~~ 430 (541)
.+.+ ..++.+..|.++....-.+..+.+..+-+++.++.|.. +|...+......++++.+.+. ...+
T Consensus 271 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (451)
T PF00083_consen 271 FIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRF-------GRRKLLIIGLLLMAICSLILGIIFFLGVSS 343 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc-------cccccccccccccccccccccccccccccc
Confidence 3433 34555666665443333455677777877776663322 344333333333333322221 1111
Q ss_pred ----c-hhHHHHHHHHHhhhccchhhH-HHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCcccc
Q 009176 431 ----V-ALYTSTAIIGVCSGAITSISV-TTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMG 504 (541)
Q Consensus 431 ----~-~l~~~s~liG~~yG~~~~l~P-~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G 504 (541)
. ...+...+....++..++..+ .+++|+|.++.=++-.|+.....-+++.+.+.+...+.|..+.
T Consensus 344 ~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~--------- 414 (451)
T PF00083_consen 344 SSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGG--------- 414 (451)
T ss_pred ccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---------
Confidence 1 122233344456665555555 7889999999999999998877778888877777777666542
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009176 505 MACYRSTFILWGSFCLFGTFLALILYARTR 534 (541)
Q Consensus 505 ~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r 534 (541)
...|.+.+++++++.++.......||
T Consensus 415 ----~~~~~i~~~~~~i~~i~~~~~lpET~ 440 (451)
T PF00083_consen 415 ----WGVFLIFAGVCLIAIIFVYFFLPETK 440 (451)
T ss_pred ----cccchhhHHHHHHHHhheeEEEeeCC
Confidence 56777877888888877766655555
No 88
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.59 E-value=2.1e-05 Score=84.13 Aligned_cols=357 Identities=19% Similarity=0.138 Sum_probs=231.3
Q ss_pred CccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 009176 25 TNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLS 103 (541)
Q Consensus 25 t~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~ 103 (541)
+-+.-..-=|++.+.+|.|..+.-.+=+.--+|..+ +++-..+.||+++|-+++...+...+|-.+..++ +.
T Consensus 28 tEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alA-------p~ 100 (394)
T COG2814 28 TEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALA-------PS 100 (394)
T ss_pred HHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh-------cc
Confidence 456677778999999999999999999999999977 9999999999999999887777666776555432 56
Q ss_pred HHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhh
Q 009176 104 YAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFP 182 (541)
Q Consensus 104 ~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p 182 (541)
||.+.+.=++.|.+.+-+-..+...++|-=|+ +||.|+|+...- ++-+.
T Consensus 101 f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G--~tlA~---------------------------- 150 (394)
T COG2814 101 FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTG--LTLAT---------------------------- 150 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHH--HHHHH----------------------------
Confidence 88888888888887776666666666666665 789998875432 22211
Q ss_pred hHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhcccc
Q 009176 183 LLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVI 262 (541)
Q Consensus 183 ~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~i 262 (541)
+++.|.=+.+|+.- +....|....+++.- ..+.+....|
T Consensus 151 ----v~GvPLGt~ig~~~-------------GWR~~F~~ia~l~ll---------------------~~~~~~~~lP--- 189 (394)
T COG2814 151 ----VLGVPLGTFLGQLF-------------GWRATFLAIAVLALL---------------------ALLLLWKLLP--- 189 (394)
T ss_pred ----HHhccHHHHHHHHh-------------hHHHHHHHHHHHHHH---------------------HHHHHHHhCC---
Confidence 12222212221110 111111110000000 0001111122
Q ss_pred ccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHH
Q 009176 263 PLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWL 342 (541)
Q Consensus 263 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwl 342 (541)
|- +. ++ +.. .+-.+..+.+|++.-|.
T Consensus 190 ~~------------------~~-------------~~--------------~~~---------~~~~~~~~~l~~p~v~~ 215 (394)
T COG2814 190 PS------------------EI-------------SG--------------SLP---------GPLRTLLRLLRRPGVLL 215 (394)
T ss_pred Cc------------------cC-------------CC--------------CCC---------cchhHHHHHhcCchHHH
Confidence 00 00 00 000 11134478999999999
Q ss_pred HHHHHHHhhcccceeecchHHHHhhh-cCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHH
Q 009176 343 YFFVYFSGATLGLVFLNNLGQIAESR-GCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMA 419 (541)
Q Consensus 343 lf~~~~~g~g~Glm~I~n~g~i~~sl-g~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~ 419 (541)
.+++.+++.+..-+...-++++.++. |.+ ..+...-++.+..++|-+++|.+.|.. +|..... ..++++
T Consensus 216 ~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr~-------~~~~l~~-~~~l~a 287 (394)
T COG2814 216 GLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADRG-------PRRALIA-ALLLLA 287 (394)
T ss_pred HHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhcccc-------chhHHHH-HHHHHH
Confidence 99999999998888888888888764 665 455677788999999999999885532 3444333 333344
Q ss_pred HHHHHHhhcc-cc-hhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCC
Q 009176 420 GAFMLLLNET-NV-ALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNA 497 (541)
Q Consensus 420 ~~~ll~~~~~-~~-~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~ 497 (541)
+.++.+.... +. ...+...+.|+..+...-....-.++ .-+++-..-=++...+.-+|--++..+.|.++|+ ..
T Consensus 288 ~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~-~g-- 363 (394)
T COG2814 288 LALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA-LG-- 363 (394)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hc--
Confidence 4444443332 32 33334445677766666666677777 6677777666666666667767777778899998 44
Q ss_pred CCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009176 498 HNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRK 535 (541)
Q Consensus 498 ~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~ 535 (541)
|..+.++.+.+.+++.++.++..++.||
T Consensus 364 ----------~~~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 364 ----------YAATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 8999999999999999988887665554
No 89
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.55 E-value=4.2e-07 Score=95.87 Aligned_cols=170 Identities=14% Similarity=0.100 Sum_probs=128.0
Q ss_pred hhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHH
Q 009176 338 VDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALM 415 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~ 415 (541)
+++|.+-+..++..-...++..-+..+.+++|.+ +....++...+...+|++..|.+.|. .+|...+....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-------~g~r~~~~~~~ 75 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSR-------YSLKHILLFLV 75 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHcc-------CccHHHHHHHH
Confidence 4566665554443333334445667778888875 45678999999999999999987442 14555555555
Q ss_pred HHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcC
Q 009176 416 APMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEG 494 (541)
Q Consensus 416 ~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~ 494 (541)
++.+++.++.....+ ..+++.-.+.|++.|..++..+++++|++..++.+...++...+..+|..+++.+++.+.|..
T Consensus 76 ~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~- 154 (382)
T PRK10091 76 ALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF- 154 (382)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc-
Confidence 666666666665555 467788899999999999999999999999999999999999999999999998999998754
Q ss_pred CCCCCCccccccccHHHHHHHHHHHHHHHHHHH
Q 009176 495 HNAHNGKCMGMACYRSTFILWGSFCLFGTFLAL 527 (541)
Q Consensus 495 ~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl 527 (541)
+ +|.+|.+.+..+++..+...
T Consensus 155 g------------wr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 155 S------------WRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred c------------HHHHHHHHHHHHHHHHHHHH
Confidence 3 89999999887766655443
No 90
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.51 E-value=2.8e-05 Score=85.73 Aligned_cols=150 Identities=15% Similarity=-0.013 Sum_probs=92.7
Q ss_pred CCCccchhHHHHHHHHHHHHhc-CCccccc-cchHHHHHHhCCChhhHHHHHHhhhhhc-ccchhhhhhccc-cchHHHH
Q 009176 2 PLNSNILQWLSLVGAIWLQSIN-GTNSNFP-AYSSQLKQLLSLSQLQLNNLAFASDAGK-LFGWISGVASVY-LPLWLVL 77 (541)
Q Consensus 2 ~~~~~~~rw~~l~as~~v~~~~-Gt~Y~f~-~ys~~lk~~l~~sq~~l~~l~~~~~~G~-~~G~~~Gll~d~-~pp~~vl 77 (541)
||+... +|..+.....+..+- -+-|..- .-..-+++.+|+|+++...+..+...-. ..-+++|.+.|| +|++-++
T Consensus 6 ~~~~~~-~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~ 84 (489)
T PRK10207 6 PMGLLQ-QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI 84 (489)
T ss_pred Ccchhc-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH
Confidence 777753 333343333343332 2222222 2233457789999999987766666444 447899999999 9999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCCC---CceehhhHHHhhhhHHHH
Q 009176 78 LIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPFD---RQVAVGITSSYLGLSAKL 154 (541)
Q Consensus 78 liGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~---RG~a~gllk~~~GLSaai 154 (541)
++|.+...+|+....+.-+. ..++.+...+.|.|.+.+.......-.+.||++ |+.+.++.--...+++++
T Consensus 85 ~~g~~~~~~g~~~~~~~~~~------~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~ 158 (489)
T PRK10207 85 VLGAIVLAIGYFMTGMSLLK------PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLI 158 (489)
T ss_pred HHHHHHHHHHHHHHHHhccc------hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHH
Confidence 99999999999888764211 122334455556666555444444445889864 366666665555665554
Q ss_pred HHHH
Q 009176 155 YTSA 158 (541)
Q Consensus 155 ft~i 158 (541)
-..+
T Consensus 159 g~~l 162 (489)
T PRK10207 159 SLSL 162 (489)
T ss_pred HHHH
Confidence 4333
No 91
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.50 E-value=7.4e-07 Score=95.88 Aligned_cols=169 Identities=9% Similarity=-0.004 Sum_probs=120.7
Q ss_pred hhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccc-hhhhcccCCCCChhHHHHHH
Q 009176 338 VDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPASIGAL 414 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~l~~~ 414 (541)
.-++..++.+++.......+-..+.++.+++|.+ +....+++..+...++++.+|.+ |++ +|...+.+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~--------g~r~~~~~~ 94 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS--------NARYFMGIG 94 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc--------CCchhHHHH
Confidence 4444444444443322222223456777788876 45678888888888999999988 443 344445555
Q ss_pred HHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhc
Q 009176 415 MAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKE 493 (541)
Q Consensus 415 ~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~ 493 (541)
.++..++.++.....+ ..+++.-.+.|+..|..++...++++|.|..|+.++..++...+..+|+.+++.+.|.++|..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 174 (434)
T PRK11663 95 LIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY 174 (434)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 5555666555555444 345555667899999999999999999999999999999999999999999999999998864
Q ss_pred CCCCCCCccccccccHHHHHHHHHHHHHHHHHHH
Q 009176 494 GHNAHNGKCMGMACYRSTFILWGSFCLFGTFLAL 527 (541)
Q Consensus 494 ~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl 527 (541)
. +|..|++.+.++++..++..
T Consensus 175 -g------------w~~~f~~~~i~~~~~~~~~~ 195 (434)
T PRK11663 175 -G------------WRYGMMIAGIIAIVVGLFLC 195 (434)
T ss_pred -c------------HHHHHHHHHHHHHHHHHHHH
Confidence 3 89999998877665544433
No 92
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.49 E-value=8.6e-07 Score=97.14 Aligned_cols=168 Identities=16% Similarity=0.137 Sum_probs=124.1
Q ss_pred hHHHHHHHHHHhhcccceeecchHHHHhh---hcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHH
Q 009176 339 DFWLYFFVYFSGATLGLVFLNNLGQIAES---RGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGA 413 (541)
Q Consensus 339 ~Fwllf~~~~~g~g~Glm~I~n~g~i~~s---lg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~ 413 (541)
.+|.+++..++-..+--....++....+. +|++ ++...++..++...++++.+|++.|- .++|...+..
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr------~~G~~~~l~~ 84 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDR------VWGTKKTMVL 84 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHh------hcchHHHHHH
Confidence 46777766665322222233345555443 6765 56778999999999999999998442 1266666666
Q ss_pred HHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCc---ccchhhhhhhhhhhhHHHHHHHHHHH
Q 009176 414 LMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKN---FSVNHNIVVANIPIGSFLFGYLAALV 489 (541)
Q Consensus 414 ~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~---fg~nyg~~~~a~~~Gs~l~~~laG~i 489 (541)
..+++++++++++...+ ..++++-.+.|++.|...+..+++++|.|..++ -+..+|+.+.+..+|+.+++.+.|++
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l 164 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVI 164 (475)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHH
Confidence 77777777777665543 356667778999999999999999999998764 77789999999999999999999999
Q ss_pred hhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHH
Q 009176 490 YHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFL 525 (541)
Q Consensus 490 yD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~l 525 (541)
.|..+ |+.+|.+.+..++++.++
T Consensus 165 ~~~~g-------------~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 165 AENYG-------------YHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHhcC-------------hHHHHHHHHHHHHHHHHH
Confidence 98643 899999988766665444
No 93
>PRK03699 putative transporter; Provisional
Probab=98.48 E-value=9.3e-07 Score=93.62 Aligned_cols=171 Identities=17% Similarity=0.147 Sum_probs=126.4
Q ss_pred hhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHH
Q 009176 338 VDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALM 415 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~ 415 (541)
+-+|..++.+++..+.-.+.-..+.++.+.++.+ +.....++..+...+|.+.+|.+.|.. +|...+....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-------g~r~~~~~~~ 79 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-------PLKRQLIFGF 79 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hHHHHHHHHH
Confidence 4577777777766554333444567888888886 345677788888889999988884422 4444455555
Q ss_pred HHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcC
Q 009176 416 APMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEG 494 (541)
Q Consensus 416 ~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~ 494 (541)
++.+++.++.....+ ..+++.-.+.|++.|..++...+.+.|.|..|+-+...++......+|+.+++.+.+.+.+.+.
T Consensus 80 ~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 159 (394)
T PRK03699 80 ALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSI 159 (394)
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 555566555555544 3466677899999999999999999999988889998898888889999999999998877655
Q ss_pred CCCCCCccccccccHHHHHHHHHHHHHHHHHHH
Q 009176 495 HNAHNGKCMGMACYRSTFILWGSFCLFGTFLAL 527 (541)
Q Consensus 495 ~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl 527 (541)
+ +|..|.+.+.++++..++.+
T Consensus 160 g------------w~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 160 E------------WYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred c------------HHHHHHHHHHHHHHHHHHHH
Confidence 5 89999998887766655443
No 94
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.47 E-value=5.3e-07 Score=103.87 Aligned_cols=191 Identities=11% Similarity=0.022 Sum_probs=127.9
Q ss_pred HHhhhhchhHHHHHHHHHHhhccc---ceeec-chHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCC
Q 009176 331 AMLMLQRVDFWLYFFVYFSGATLG---LVFLN-NLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHM 404 (541)
Q Consensus 331 ~~q~l~~~~Fwllf~~~~~g~g~G---lm~I~-n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~ 404 (541)
+.++-.++..|.++++.+++.... .+.++ -+.++.+.+|.+ +.+...++..+...+|.+++|+++|..
T Consensus 156 l~~~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~------ 229 (742)
T TIGR01299 156 IQECGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL------ 229 (742)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 345556777888776665554222 12222 234444566765 455678888888999999999885532
Q ss_pred CChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHH
Q 009176 405 IPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFG 483 (541)
Q Consensus 405 ~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~ 483 (541)
+|...+.+.+++..++.++.++..+ ..+++.-.+.|++.|+.+++.+++++|.+..++-|...+++.+.+.+|..+++
T Consensus 230 -GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~ 308 (742)
T TIGR01299 230 -GRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAA 308 (742)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666665555555555555554444 45777888999999999999999999999999999999999999999999988
Q ss_pred HHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHH
Q 009176 484 YLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALI 528 (541)
Q Consensus 484 ~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~ 528 (541)
.++..+-...+-+...+......-+|..|++.+..+++..++.++
T Consensus 309 ~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~ 353 (742)
T TIGR01299 309 AMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTF 353 (742)
T ss_pred HHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 777666543221100011112233788888877766666554443
No 95
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.47 E-value=1.3e-05 Score=86.37 Aligned_cols=159 Identities=13% Similarity=0.136 Sum_probs=96.4
Q ss_pred CHHhhhhchhHHHHHHHHHHhhcccceeecchHH-HHhhhc-CCcccchhhhhhhccccccccc-ccchhhhcccCCCCC
Q 009176 330 GAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQ-IAESRG-CSGTSSLVSLSSSFGFFGRLIP-SLFGYFFSRSKHMIP 406 (541)
Q Consensus 330 t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~-i~~slg-~~~~~~~Vsl~Si~N~~GRl~~-G~~s~~~~~~~~~~~ 406 (541)
+..+++|+++++..++..++. +......++-.. .-+++| ++....- .++++ +.+.-+.. -..++++ || .+
T Consensus 199 ~~~~llk~~~~~~Fll~~~l~-~~~~~~~~~f~~~yl~~~gg~~~~~~g-~~~~l-~~~aEi~~f~~~~~~~-~r---~g 271 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFLI-GISHAAYYTFFSIYLQELGGYSGSTIG-ILWAL-GVVAEIPFFFFSGRFL-KR---FG 271 (400)
T ss_pred HHHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcccchhhHHH-HHHHH-HHHHHHHHHHHHHHHH-Hh---cC
Confidence 346899999998765555444 333333444333 356676 4322111 11121 11223332 1224443 22 13
Q ss_pred hhHHHHHHHHHHHHHHHHHhhc-ccch-hHHH----HHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhh-hhhhhhH
Q 009176 407 SPASIGALMAPMAGAFMLLLNE-TNVA-LYTS----TAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVV-ANIPIGS 479 (541)
Q Consensus 407 R~~~l~~~~~~~~~~~ll~~~~-~~~~-l~~~----s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~-~a~~~Gs 479 (541)
-.+++.+..+..++=..+.+.. .|.. .++. -.+=|++||..+......+.+....+.-++-.++.. +..++|.
T Consensus 272 ~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~ 351 (400)
T PF03825_consen 272 IKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGG 351 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHH
Confidence 3344444444444445555544 3322 2222 234699999999999999999999999899999876 5689999
Q ss_pred HHHHHHHHHHhhhcCC
Q 009176 480 FLFGYLAALVYHKEGH 495 (541)
Q Consensus 480 ~l~~~laG~iyD~~~~ 495 (541)
.+++.++|++||+.+.
T Consensus 352 ~iG~~igG~l~~~~g~ 367 (400)
T PF03825_consen 352 AIGSLIGGWLYDAFGA 367 (400)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999999775
No 96
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.46 E-value=5.1e-07 Score=92.37 Aligned_cols=170 Identities=11% Similarity=-0.017 Sum_probs=115.4
Q ss_pred HHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHH
Q 009176 340 FWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAP 417 (541)
Q Consensus 340 Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~ 417 (541)
||+++...++.....-+....+....++.+.+ +.....++..+...++.+..|.+.|.. +|...+....++
T Consensus 1 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-------g~r~~~~~~~~~ 73 (365)
T TIGR00900 1 FRLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-------DRKKVMIGADLI 73 (365)
T ss_pred CeehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-------chhHHHHHHHHH
Confidence 35555544444322222222334455555554 345677777777888888888874422 344444434333
Q ss_pred HHHHHHHHhhcc-----c-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhh
Q 009176 418 MAGAFMLLLNET-----N-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYH 491 (541)
Q Consensus 418 ~~~~~ll~~~~~-----~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD 491 (541)
..++.++..... + ..+++...+.|++.|...+...++++|++..|+.+..+|+...+..+|..+++.+++.++|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 153 (365)
T TIGR00900 74 RAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA 153 (365)
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333332222 3 4577788899999999999999999999999999999999999999999999999999998
Q ss_pred hcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 492 KEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 492 ~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
..+ ++.+|.+.+..++++.++...+
T Consensus 154 ~~g-------------~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 154 TLG-------------IKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred Hhh-------------HHHHHHHHHHHHHHHHHHHHhc
Confidence 754 6899988877776665554444
No 97
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.44 E-value=4.2e-06 Score=89.87 Aligned_cols=370 Identities=15% Similarity=0.128 Sum_probs=196.4
Q ss_pred cchhHHHHHHHHHHHHhcCCcc-ccccchHHHHHHhCCChhhHHHHHHhhh-hhcccchhhhhhccccchHHHHHHHHHH
Q 009176 6 NILQWLSLVGAIWLQSINGTNS-NFPAYSSQLKQLLSLSQLQLNNLAFASD-AGKLFGWISGVASVYLPLWLVLLIGSTL 83 (541)
Q Consensus 6 ~~~rw~~l~as~~v~~~~Gt~Y-~f~~ys~~lk~~l~~sq~~l~~l~~~~~-~G~~~G~~~Gll~d~~pp~~vlliGa~~ 83 (541)
-.+||+.|++..++..++|-.. .|+.-+.+...-+| |.+..+.++.--- +..-+|+++=++.|++|.|..+++|++.
T Consensus 40 y~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~l 118 (480)
T KOG2563|consen 40 YPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVL 118 (480)
T ss_pred chhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHH
Confidence 4689999999999988887765 46677777788888 4444555554443 4446699999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccchHH--HHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhh--hHHHHHHHH
Q 009176 84 GLIGYGLQYLFLTHTISHLSYA--HIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLG--LSAKLYTSA 158 (541)
Q Consensus 84 ~~~GY~~~~l~~~~~i~~~~~w--~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~G--LSaaift~i 158 (541)
+.+|= ++.+.-+..--++.+| ++-.--.+++.+|-++---.=+-+.-.||. +|.+|..+ |.+| |+.++=..+
T Consensus 119 n~iGa-~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~--~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 119 NGIGA-WIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVL--GVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHH-HHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhH--HHhcchHHHHHHhhc
Confidence 99994 4444444431123456 444445555555555433323445566754 68777653 3344 444444333
Q ss_pred HHHHhcCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhccccc
Q 009176 159 VNAIETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSK 238 (541)
Q Consensus 159 ~~~~~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~ 238 (541)
-..+.| - +.+ .++.....+..++.+.. +++.++
T Consensus 196 ppilV~-------------------------------~-~~~------~~~~~~~~~~~f~~~~~-l~~l~l-------- 228 (480)
T KOG2563|consen 196 PPILVP-------------------------------S-SKD------SEDNSWLFFTLFLGVEC-LAALLL-------- 228 (480)
T ss_pred cceecC-------------------------------C-CCC------cchhHHHHHHHHHHHHH-HHHHHH--------
Confidence 333332 1 100 11111111212221211 111111
Q ss_pred ccCCCCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCC
Q 009176 239 LKTLLPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDG 318 (541)
Q Consensus 239 ~~~~~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (541)
++++-.+. ++ |+.++ +.... .+.+.
T Consensus 229 --------------------~l~~~~~~--------~~-----P~tPp-----------------s~s~~---~~~~~-- 253 (480)
T KOG2563|consen 229 --------------------ALVLFVFT--------KK-----PPTPP-----------------SASQA---ALQDA-- 253 (480)
T ss_pred --------------------HHHHHhcC--------CC-----CCCCC-----------------chhHh---hhhcC--
Confidence 11110000 00 00000 00000 00000
Q ss_pred ccCCCCccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccc-h
Q 009176 319 IYHGLGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLF-G 395 (541)
Q Consensus 319 ~~~~~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~-s 395 (541)
.--.+.++.+++.+|-++.+.+.++.|.=-.....+-+...--||+ .+-..-.+.-+...+|-+.+|.+ |
T Consensus 254 -------~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~D 326 (480)
T KOG2563|consen 254 -------SFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIAD 326 (480)
T ss_pred -------cHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhh
Confidence 0114678999999999999999776553111111222122223665 33344445556677888888877 5
Q ss_pred hhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcc----cchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhh
Q 009176 396 YFFSRSKHMIPSPASIGALMAPMAGAFMLLLNET----NVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIV 471 (541)
Q Consensus 396 ~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~----~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~ 471 (541)
|. | +| +..++......+..++.+..... ...++....+.|++-=+..++.--+-.|.=.+.-=++--|++
T Consensus 327 kt--k-~f---k~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll 400 (480)
T KOG2563|consen 327 KT--K-KF---KLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLL 400 (480)
T ss_pred hh--h-hH---HHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeE
Confidence 54 2 21 22322222222222233333222 135777777888887666666555555555555566777777
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcC
Q 009176 472 VANIPIGSFLFGYLAALVYHKEG 494 (541)
Q Consensus 472 ~~a~~~Gs~l~~~laG~iyD~~~ 494 (541)
.+.-.+=+.+...+-+..-+..+
T Consensus 401 ~~~gq~f~~~~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 401 NLSGQIFGVILVFIMGILAEDLG 423 (480)
T ss_pred EeehhHHHHHHHHHHHHHhhccC
Confidence 76666666666666665554444
No 98
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.43 E-value=1.5e-06 Score=93.11 Aligned_cols=156 Identities=13% Similarity=0.057 Sum_probs=118.7
Q ss_pred ccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc
Q 009176 353 LGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN 430 (541)
Q Consensus 353 ~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~ 430 (541)
..-++.-.+.+|.++++.+ +....++++.+...+|.+.+|.++|.. +|...+....++..++.++.....+
T Consensus 31 ~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-------Grr~~l~~~~~~~~~~~~~~~~a~~ 103 (413)
T PRK15403 31 TTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-------GRRPVLITGALIFTLACAATLFTTS 103 (413)
T ss_pred HHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-------CchHHHHHHHHHHHHHHHHHHHcCC
Confidence 3345556778888888875 456788999999999999999985532 4444444455556666555555555
Q ss_pred -chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccH
Q 009176 431 -VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYR 509 (541)
Q Consensus 431 -~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~ 509 (541)
..++++-.+.|++-|.......+++.|.|..++-+...+++..+..+|..+++.+.+.+.|.. + +|
T Consensus 104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-g------------w~ 170 (413)
T PRK15403 104 MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-H------------WK 170 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C------------HH
Confidence 457777788899888767777889999999999999999999999999999988888887653 3 89
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 009176 510 STFILWGSFCLFGTFLALI 528 (541)
Q Consensus 510 ~tF~i~~~~~~~g~~lsl~ 528 (541)
..|++.+++.+++.++.+.
T Consensus 171 ~~f~~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 171 VLFAIIAVMGLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999998887777665443
No 99
>PRK10054 putative transporter; Provisional
Probab=98.42 E-value=1.2e-06 Score=93.23 Aligned_cols=174 Identities=11% Similarity=0.002 Sum_probs=120.6
Q ss_pred hhHHHHHHHHHHhhcccceeecchHHHH-hhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHH
Q 009176 338 VDFWLYFFVYFSGATLGLVFLNNLGQIA-ESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGAL 414 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Glm~I~n~g~i~-~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~ 414 (541)
+++|.+.+..++....--++..-+.... +.+|++ +....+++..+...++++..|.++|-. +|...+...
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-------g~k~~~~~~ 79 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-------DKKRYMLLA 79 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CcchhHHHH
Confidence 4588888777665332222233344433 467876 456777777788888889988884432 222333334
Q ss_pred HHHHHHHHHHHhhcccc-hhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhc
Q 009176 415 MAPMAGAFMLLLNETNV-ALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKE 493 (541)
Q Consensus 415 ~~~~~~~~ll~~~~~~~-~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~ 493 (541)
.+...++.+++.+.++. .+++.-.+.|.+++...+..++.++|.++.++.+..+|+......+|..+++.+.|.+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-- 157 (395)
T PRK10054 80 ITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-- 157 (395)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 44444555555554442 344455677888888888899999999999999999999999999999999999999985
Q ss_pred CCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhh
Q 009176 494 GHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYAR 532 (541)
Q Consensus 494 ~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r 532 (541)
.. ++.+|.+.+.+++++.++..+...|
T Consensus 158 ~g------------~~~~f~~~~~~~~i~~i~~~~~~~~ 184 (395)
T PRK10054 158 QS------------INLPFWLAAICSAFPLVFIQIWVQR 184 (395)
T ss_pred hc------------cCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 23 7899999988888876665554333
No 100
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.42 E-value=2.4e-06 Score=91.92 Aligned_cols=179 Identities=12% Similarity=-0.019 Sum_probs=119.1
Q ss_pred HHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChh
Q 009176 331 AMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSP 408 (541)
Q Consensus 331 ~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~ 408 (541)
.++. +...+|.+.+.+.+... .........+..++.|.+ +.....++..+...+|.+..|.+.|-. +|.
T Consensus 21 ~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-------g~~ 91 (438)
T TIGR00712 21 YKRL-RWQVFLGIFFGYAAYYL-VRKNFALAMPYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-------NPR 91 (438)
T ss_pred HHHH-HHHHHHHHHHHHHHHHH-HhccHHhhhHHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-------CCc
Confidence 3443 44555555554433322 111112222333445765 456678888888999999999885432 222
Q ss_pred HHHHHHHHHHHHHHHHHhhc----cc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHH
Q 009176 409 ASIGALMAPMAGAFMLLLNE----TN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFG 483 (541)
Q Consensus 409 ~~l~~~~~~~~~~~ll~~~~----~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~ 483 (541)
..+....++.+++.++.... .+ ..+++.-.+.|++.|..++.....++|.|..|+-|+..|+..++..+|+.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~ 171 (438)
T TIGR00712 92 VFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPP 171 (438)
T ss_pred eehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHH
Confidence 33333444445544443322 12 23555667889999999999999999999999999999999999999999998
Q ss_pred HHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 484 YLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 484 ~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
.+.+...+.+.. +|.+|++.+.++++..++.+++.
T Consensus 172 ~l~~~~~~~~~~------------w~~~f~~~~~~~~i~~~~~~~~~ 206 (438)
T TIGR00712 172 LLVLLGMAWFND------------WHAALYFPAICAIIVALFAFAMM 206 (438)
T ss_pred HHHHHHHHHhhh------------hHHHHHHHHHHHHHHHHHHHHhc
Confidence 888776665545 89999999998888776666554
No 101
>PRK03545 putative arabinose transporter; Provisional
Probab=98.41 E-value=1.8e-06 Score=91.00 Aligned_cols=149 Identities=16% Similarity=0.114 Sum_probs=116.5
Q ss_pred hHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHH
Q 009176 361 LGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTST 437 (541)
Q Consensus 361 ~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s 437 (541)
++++.+++|.+ +....+++..+...++.+..|.+.|- ++|...+....++.+++.++.....+ ..+++.-
T Consensus 32 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-------~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 104 (390)
T PRK03545 32 LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSN-------VERRKLLIGLFVLFIASHVLSALAWNFTVLLISR 104 (390)
T ss_pred hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-------CChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 67888888875 45667788888888888888877331 25666666666666666666555555 4566677
Q ss_pred HHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHH
Q 009176 438 AIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGS 517 (541)
Q Consensus 438 ~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~ 517 (541)
.+.|++.|..++...++++|.+..|+-+...|+...+..+|..+++.+.+.+.|..+ +|.+|.+.+.
T Consensus 105 ~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g-------------w~~~f~~~~~ 171 (390)
T PRK03545 105 IGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLG-------------WRTTFLAIGG 171 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc-------------HHHHHHHHHH
Confidence 889999999899999999999999999999999999999999999999999887543 7999999998
Q ss_pred HHHHHHHHHHHH
Q 009176 518 FCLFGTFLALIL 529 (541)
Q Consensus 518 ~~~~g~~lsl~l 529 (541)
++++..++....
T Consensus 172 ~~~l~~~~~~~~ 183 (390)
T PRK03545 172 GALITLLLLIKL 183 (390)
T ss_pred HHHHHHHHHHHh
Confidence 887776555443
No 102
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.41 E-value=4.2e-07 Score=92.65 Aligned_cols=147 Identities=19% Similarity=0.183 Sum_probs=114.9
Q ss_pred HHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHH
Q 009176 363 QIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAI 439 (541)
Q Consensus 363 ~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~l 439 (541)
.+.+++|.+ +.....++..+.+.++.+..|.+.|.. +|...+....+..+++.++..+..+ ..+.+...+
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-------GRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFL 94 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--------HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccc
Confidence 566777765 456788888888999999988884422 4555666666666666333333233 357778889
Q ss_pred HHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHH
Q 009176 440 IGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFC 519 (541)
Q Consensus 440 iG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~ 519 (541)
.|++.|..++...++++|.+..|+.+...++......+|..+++.+++.++|..+ ++..|++.+.++
T Consensus 95 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-------------~~~~~~~~~~~~ 161 (352)
T PF07690_consen 95 LGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-------------WRWAFLISAILS 161 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-------------HCCHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-------------cccccccccchh
Confidence 9999999999999999999999999999999999999999999999999986543 688999999999
Q ss_pred HHHHHHHHHH
Q 009176 520 LFGTFLALIL 529 (541)
Q Consensus 520 ~~g~~lsl~l 529 (541)
++..++...+
T Consensus 162 ~~~~il~~~~ 171 (352)
T PF07690_consen 162 LIAAILFILF 171 (352)
T ss_dssp HHHHHHHHCC
T ss_pred hhhhhhHhhh
Confidence 8887754444
No 103
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.41 E-value=2.1e-06 Score=86.79 Aligned_cols=170 Identities=21% Similarity=0.223 Sum_probs=122.7
Q ss_pred HHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHH
Q 009176 341 WLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPM 418 (541)
Q Consensus 341 wllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~ 418 (541)
|.+.+..++.....-+.......+.++.+.+ +.+...++..+...++++..|.+.|.. +|..++.......
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-------g~r~~~~~~~~~~ 74 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-------GRRRVLLLGLLLF 74 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-------CCchhhHHHHHHH
Confidence 3444444333222222333445556666664 456677888888899999999884432 2333444555555
Q ss_pred HHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCC
Q 009176 419 AGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNA 497 (541)
Q Consensus 419 ~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~ 497 (541)
.++.++.....+ ..+++...+.|++.|..++..++++.|.+..|+.++..++......+|..+++.+++.+.|..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--- 151 (352)
T cd06174 75 ALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG--- 151 (352)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 666555554444 4577788899999999999999999999999999999999999999999999999999998754
Q ss_pred CCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 498 HNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 498 ~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
++..|.+.+...+++.++...+.
T Consensus 152 ----------~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
T cd06174 152 ----------WRWLFLILAILGLLLALLLLFLL 174 (352)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899998888877776665543
No 104
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.41 E-value=1.5e-06 Score=90.43 Aligned_cols=153 Identities=16% Similarity=0.110 Sum_probs=118.8
Q ss_pred eecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chh
Q 009176 357 FLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VAL 433 (541)
Q Consensus 357 ~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l 433 (541)
+.-.+.++.+++|.+ +.....++..+...+|++..|.+.|.. +|..++....++..++.++.....+ ..+
T Consensus 10 ~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-------g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 10 YLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-------GRKPVILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-------CChHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 445667788888875 456788888999999999999885432 3444444445555555554444444 457
Q ss_pred HHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHH
Q 009176 434 YTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFI 513 (541)
Q Consensus 434 ~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~ 513 (541)
++...+.|++.|.......+++.|.+..|+.+...++......+|..+++.+.+.+.|..+ ++..|.
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-------------~~~~~~ 149 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-------------WHAIFW 149 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-------------hHHHHH
Confidence 7778899999999999999999999999999999999999999999999999999998653 799999
Q ss_pred HHHHHHHHHHHHHHHH
Q 009176 514 LWGSFCLFGTFLALIL 529 (541)
Q Consensus 514 i~~~~~~~g~~lsl~l 529 (541)
+.+.++++..++..+.
T Consensus 150 ~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 150 VLALAAILAAALVFFF 165 (377)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9988888776666544
No 105
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.40 E-value=1e-05 Score=86.78 Aligned_cols=156 Identities=15% Similarity=0.137 Sum_probs=104.3
Q ss_pred HHhhhhchhHHHHHHHHHHhhcccceeecch-HHHHhh-hcCC-cccchhhhhhhcccccccccccchhhhcccCCCCCh
Q 009176 331 AMLMLQRVDFWLYFFVYFSGATLGLVFLNNL-GQIAES-RGCS-GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPS 407 (541)
Q Consensus 331 ~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~-g~i~~s-lg~~-~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R 407 (541)
.++..++++|+.++...++. ..+....+.. -...+. +|.+ ..+.+..+..+...++-.+++.+.|.. +|
T Consensus 218 ~~~~~~nr~~~~l~~~~~~~-~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~-------gk 289 (428)
T PF13347_consen 218 LRSLFRNRPFRILLLAFFLQ-WLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRF-------GK 289 (428)
T ss_pred hhhhcccchHHHHHHHHHHH-HhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHc-------cc
Confidence 47888899999988888775 3333333333 333333 3443 234455566666777777777775433 22
Q ss_pred hHHHHHHHHHHHHHHHHHhhc--cc-chhHHHHHHHHHhhhccchhhHHHhhhhc-------CCCcccchhhhhhhhhhh
Q 009176 408 PASIGALMAPMAGAFMLLLNE--TN-VALYTSTAIIGVCSGAITSISVTTTTELF-------GTKNFSVNHNIVVANIPI 477 (541)
Q Consensus 408 ~~~l~~~~~~~~~~~ll~~~~--~~-~~l~~~s~liG~~yG~~~~l~P~ivse~F-------G~k~fg~nyg~~~~a~~~ 477 (541)
...+....++.+++.+++... .+ ..+++..++.|+++|..+.+.+++.+|.- |.+.-|..+++.....-+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~ 369 (428)
T PF13347_consen 290 KKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI 369 (428)
T ss_pred eeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH
Confidence 333334444455554443333 23 56888889999999999999999999876 577889999999988888
Q ss_pred hHHHHHHHHHHHhhhcC
Q 009176 478 GSFLFGYLAALVYHKEG 494 (541)
Q Consensus 478 Gs~l~~~laG~iyD~~~ 494 (541)
|.-+.+.+.|.+-+..+
T Consensus 370 ~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 370 GQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 88888777777765543
No 106
>PRK09669 putative symporter YagG; Provisional
Probab=98.38 E-value=1.5e-05 Score=85.99 Aligned_cols=158 Identities=9% Similarity=0.080 Sum_probs=92.1
Q ss_pred CHHhhhhchhHHHHHHHHHHhhcccceeecchHHHH-hh-hcCCcc-cchhhhhhhcccccccccccchhhhcccCCCCC
Q 009176 330 GAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIA-ES-RGCSGT-SSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIP 406 (541)
Q Consensus 330 t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~-~s-lg~~~~-~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~ 406 (541)
..+++++++.||.+.+.+++.. .+....+.....- +. ++.++. ........+...+|-.+++.+.|.. +
T Consensus 221 ~~~~~~~n~~~~~l~~~~~~~~-~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-------g 292 (444)
T PRK09669 221 DLKLLLGNSQWRIMFIFNVVLL-TAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKF-------D 292 (444)
T ss_pred HHHHHhCCchHHHHHHHHHHHH-HHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------C
Confidence 3578899999999877655432 1111111111110 00 111111 1122222344445666666553322 2
Q ss_pred hhHHHHHHHHHHHH-HHHHHhh-ccc-chhHHHHHHHHHhhhccchhhHHHhhhhc-------CCCcccchhhhhhhhhh
Q 009176 407 SPASIGALMAPMAG-AFMLLLN-ETN-VALYTSTAIIGVCSGAITSISVTTTTELF-------GTKNFSVNHNIVVANIP 476 (541)
Q Consensus 407 R~~~l~~~~~~~~~-~~ll~~~-~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~F-------G~k~fg~nyg~~~~a~~ 476 (541)
|...+....+..++ ...+... ..+ ..+++..++.|+++|....+.+++++|.. |.+.-|..+++.....-
T Consensus 293 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~k 372 (444)
T PRK09669 293 RVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIK 372 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHH
Confidence 22222222222222 2222222 223 24667778999999999999999999987 88888999999998899
Q ss_pred hhHHHHHHHHHHHhhhcCC
Q 009176 477 IGSFLFGYLAALVYHKEGH 495 (541)
Q Consensus 477 ~Gs~l~~~laG~iyD~~~~ 495 (541)
+|.-+++.+.|.++|..+=
T Consensus 373 lg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 373 LGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 9999999999999987653
No 107
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.36 E-value=3.3e-06 Score=89.45 Aligned_cols=172 Identities=10% Similarity=0.051 Sum_probs=122.8
Q ss_pred chhHHHHHHHHHHhhc----ccceeecchHHHHhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHH
Q 009176 337 RVDFWLYFFVYFSGAT----LGLVFLNNLGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPAS 410 (541)
Q Consensus 337 ~~~Fwllf~~~~~g~g----~Glm~I~n~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~ 410 (541)
+.++|++.+.+.++.. +.-++.-.+.++.++++.++ ....++...+...++.+..|.+.|.. +|...
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-------g~r~~ 80 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-------GRRPV 80 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CChHH
Confidence 4677777777766654 23334446677888888763 45677888888889999988884432 33333
Q ss_pred HHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHH
Q 009176 411 IGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALV 489 (541)
Q Consensus 411 l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~i 489 (541)
+.....+..++.++.....+ ..+++...+.|++.|...+..++.+.|.|..++-....++......+|..++|.+.+.+
T Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l 160 (406)
T PRK15402 81 MLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAAL 160 (406)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444555444444444 45777788999999998899999999999888877777888777778888889999998
Q ss_pred hhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHH
Q 009176 490 YHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALI 528 (541)
Q Consensus 490 yD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~ 528 (541)
.|.. . ++.+|++.++++++..+....
T Consensus 161 ~~~~-~------------w~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK15402 161 IHVL-P------------WRGMFVLFAALAALSFFGLWR 186 (406)
T ss_pred HHcc-C------------ccHHHHHHHHHHHHHHHHHHH
Confidence 8753 3 799999988888777655443
No 108
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.36 E-value=1.8e-06 Score=75.42 Aligned_cols=133 Identities=13% Similarity=0.134 Sum_probs=98.6
Q ss_pred hhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHh
Q 009176 377 VSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTT 455 (541)
Q Consensus 377 Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~iv 455 (541)
.+..++.+.+++...|.+.|.. +|...+........++.++.....+ ..+.+...+.|++.|...+...+.+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 76 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRF-------GRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALI 76 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhc-------chhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 3455666777777777663321 3444444444444455444444444 3466677899999999999999999
Q ss_pred hhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 456 TELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 456 se~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
.|.+..++.++..++..+...+|..+++.+.+.+.|..+ |+..|.+.+..++++.++...+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 77 ADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG-------------WRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-------------hHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999987543 7889999888877776665544
No 109
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.35 E-value=2.5e-06 Score=91.39 Aligned_cols=152 Identities=13% Similarity=0.090 Sum_probs=112.5
Q ss_pred HHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHH
Q 009176 364 IAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAII 440 (541)
Q Consensus 364 i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~li 440 (541)
+.+++|.+ +.....++..+.-.+|.+..|.+.|.. +|...+...+++..++.++.+...+ ..+++.-.+.
T Consensus 34 l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-------G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 106 (412)
T TIGR02332 34 MGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-------GARRWIAGIMVLWGIASTATMFATGPESLYLLRILV 106 (412)
T ss_pred hHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-------ChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 34556664 445678888888888999988874422 5555556566666666665555544 4677888899
Q ss_pred HHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHH
Q 009176 441 GVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCL 520 (541)
Q Consensus 441 G~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~ 520 (541)
|++.|+.++...++++|+|..|+-+...|+...+.++|..+++.+++++.+.+.- .+..=+|.+|++.+..++
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-------~~~~gwr~~f~~~~~~~l 179 (412)
T TIGR02332 107 GIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGL-------MALKGWQWLFLLEGFPSV 179 (412)
T ss_pred HHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-------CCccchhHHHHHHHHHHH
Confidence 9999999988889999999999999999999999999999999999999864210 000018999999888776
Q ss_pred HHHHHHHHH
Q 009176 521 FGTFLALIL 529 (541)
Q Consensus 521 ~g~~lsl~l 529 (541)
+.+++..+.
T Consensus 180 ~~~~~~~~~ 188 (412)
T TIGR02332 180 ILGVMTWFW 188 (412)
T ss_pred HHHHHHhhc
Confidence 655544444
No 110
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.33 E-value=4.5e-06 Score=87.93 Aligned_cols=169 Identities=12% Similarity=0.134 Sum_probs=123.0
Q ss_pred HHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHH
Q 009176 340 FWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAP 417 (541)
Q Consensus 340 Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~ 417 (541)
.|++.....++.....++...+.++.+++|.+ +.....++..+...++.+..|.+.|.. +|...+......
T Consensus 10 l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-------grr~~~~~~~~~ 82 (394)
T PRK11652 10 LFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-------GRRPVILVGMSI 82 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-------CChHHHHHHHHH
Confidence 45555555555554455666778888899886 456678888899999999999885432 333444444444
Q ss_pred HHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCC
Q 009176 418 MAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHN 496 (541)
Q Consensus 418 ~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~ 496 (541)
..++.++.....+ ..+++...+.|++.|........++.|.+..++.+...++..++..++..+++.++|.+.|..+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-- 160 (394)
T PRK11652 83 FILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-- 160 (394)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--
Confidence 5555444444444 4567777889999998888888899999998999999999999999999999999999887543
Q ss_pred CCCCccccccccHHHHHHHHHHHHHHHHHHHH
Q 009176 497 AHNGKCMGMACYRSTFILWGSFCLFGTFLALI 528 (541)
Q Consensus 497 ~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~ 528 (541)
++.+|.+.+.++++..++..+
T Consensus 161 -----------~~~~f~~~~~~~~~~~~~~~~ 181 (394)
T PRK11652 161 -----------WRACYLFLLLLGAGVTFSMAR 181 (394)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHH
Confidence 799999987776655544433
No 111
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.32 E-value=2e-05 Score=87.06 Aligned_cols=339 Identities=17% Similarity=0.139 Sum_probs=188.2
Q ss_pred HHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHH-HHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHH
Q 009176 36 LKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLV-LLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVL 113 (541)
Q Consensus 36 lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~v-lliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l 113 (541)
+++.+|+...|+|.+.+...+|=.+ =+|+|++.||+|+... ...+.+-.+.+...-| +. ++|.++..-++
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~------~~--s~~~~ialr~l 143 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA------VH--SFPGLIALRFL 143 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH------Hh--hhHHHHHHHHH
Confidence 8899999999999999999999866 5799999999994433 2223222233333323 11 35777777777
Q ss_pred hccccccccceeeeeecccC--CCCCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCc----ccchhhhh-chhhhHhH
Q 009176 114 AGNSICWINTVCYVVTIKNF--PFDRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKR----AKLYLLFN-SIFPLLAC 186 (541)
Q Consensus 114 ~g~g~~~~nTa~lvt~v~NF--P~~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d----~~~fLlll-a~~p~~v~ 186 (541)
.|.-++- -..+.+..+.|| +++||+..|+.-+..++++.+=+.+...+++ - ++. .=.+++++ +.+....+
T Consensus 144 lGl~es~-~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~-~-~~~~~~~gW~~~FiI~G~i~~~~g 220 (495)
T KOG2533|consen 144 LGLFESG-GWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK-L-NGSGGLAGWRWLFIIEGVITLVLG 220 (495)
T ss_pred HHHHhcc-cchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhh-h-cCCCCcCCceeehhHHHHHHHHHH
Confidence 7765441 125666666666 4589999999999999999999999888762 0 011 11122221 12222222
Q ss_pred hhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhcccccccc
Q 009176 187 VVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLVIPLGE 266 (541)
Q Consensus 187 l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ip~~~ 266 (541)
++..+++... |. +..|.
T Consensus 221 i~~f~~lp~~-P~------------~~~fl-------------------------------------------------- 237 (495)
T KOG2533|consen 221 IVVFFFLPDN-PS------------KAWFL-------------------------------------------------- 237 (495)
T ss_pred heEEEEecCC-hh------------hcccc--------------------------------------------------
Confidence 2222222211 10 00010
Q ss_pred chhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhchhHHHHHHH
Q 009176 267 KIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRVDFWLYFFV 346 (541)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~~Fwllf~~ 346 (541)
. .+|. +.. ..+.+++ +.. ++.++ .+-...+|+++++..|.+.+.
T Consensus 238 ---~----~~ek----~~~--------~~~~~~~---~~~-----~~~~~---------~~~~~~~~a~~dp~vw~~~l~ 281 (495)
T KOG2533|consen 238 ---T----DEEK----ELV--------VERLRES---PSG-----GIENK---------FKWKGFKEALKDPGVWPFSLC 281 (495)
T ss_pred ---c----hHHH----HHH--------HHHHHhc---cCC-----Ccccc---------cCHHHHHHHHhchhHHHHHHH
Confidence 0 0000 000 0000000 000 00000 133677999999999999999
Q ss_pred HHHhhcccceeecchHHHHhh-hcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHH-HHHHHHHHHHHH
Q 009176 347 YFSGATLGLVFLNNLGQIAES-RGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPAS-IGALMAPMAGAF 422 (541)
Q Consensus 347 ~~~g~g~Glm~I~n~g~i~~s-lg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~-l~~~~~~~~~~~ 422 (541)
++|....--..-+-+..+-++ .|++ ++..+-..+.+.+.+|=+++|+++|... ....|.+. .....+...++.
T Consensus 282 ~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~---~~~~~~~~~~~~~~~~~~~g~ 358 (495)
T KOG2533|consen 282 YFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK---TIFARRLLFIVFLCLYAIIGA 358 (495)
T ss_pred HHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHH
Confidence 999876655555556666666 4464 3455666677778888888999966531 01234443 333444455554
Q ss_pred HHHhhcc-cchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhh--hhHHHHHHHHHHHhhh
Q 009176 423 MLLLNET-NVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIP--IGSFLFGYLAALVYHK 492 (541)
Q Consensus 423 ll~~~~~-~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~--~Gs~l~~~laG~iyD~ 492 (541)
..+.... +...+. ++-+|......++++.+..=-++..-|++-+.+... .+.-..+.+.+.+|-.
T Consensus 359 ~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~ 426 (495)
T KOG2533|consen 359 ISLLAAAVLPGAYG-----AFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRS 426 (495)
T ss_pred HHHHhhccchHHhH-----HHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhccc
Confidence 4332222 212221 122233334455666666667777778877664433 3334445666777644
No 112
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.28 E-value=1.3e-05 Score=83.10 Aligned_cols=163 Identities=11% Similarity=-0.004 Sum_probs=107.7
Q ss_pred hhhhchhHHHHHHHHHHhhcccceeecchHHHHhh---hcCC--cccchhhhhhhcccccccccccchhhhcccCCCCCh
Q 009176 333 LMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAES---RGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPS 407 (541)
Q Consensus 333 q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~s---lg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R 407 (541)
..++++.+|+..+.+++-.|.-..+-+......++ .|++ +.+..++.....-.+||+.++.+.|.. ++
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-------g~ 207 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-------SQ 207 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CH
Confidence 46778999998888888776655544444444432 3554 456788889999999999988774322 22
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHH
Q 009176 408 PASIGALMAPMAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAA 487 (541)
Q Consensus 408 ~~~l~~~~~~~~~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG 487 (541)
...+....+..++..++.....+........++|++.+..++..-+...+.++. +-++.-+++.+ ..+|+.++|.+.|
T Consensus 208 ~~~l~~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~~~-~~~Gg~i~P~l~G 285 (310)
T TIGR01272 208 GRYLAFNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGILCL-AIVGGAIVPLLQG 285 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHHHH-HHhcchHHHHHHH
Confidence 222333333333333333333332223456689999999999988999999885 45666677644 4488999999999
Q ss_pred HHhhhcCCCCCCCccccccccHHHHHHHHH
Q 009176 488 LVYHKEGHNAHNGKCMGMACYRSTFILWGS 517 (541)
Q Consensus 488 ~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~ 517 (541)
.+-|..+ ++.+|.+...
T Consensus 286 ~lad~~g-------------~~~a~~v~~~ 302 (310)
T TIGR01272 286 SLADCLG-------------IQLAFALPVP 302 (310)
T ss_pred HHHHhcc-------------chHHHHHHHH
Confidence 9999765 4777775433
No 113
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.28 E-value=4.3e-06 Score=90.83 Aligned_cols=149 Identities=15% Similarity=0.167 Sum_probs=107.7
Q ss_pred chHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHH
Q 009176 360 NLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTS 436 (541)
Q Consensus 360 n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~ 436 (541)
.+.++.+.+|.+ +.....++..+...++..+.|.+.|.. +|...+....+++.++.++.++..+ ..+++.
T Consensus 41 ~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-------g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 113 (455)
T TIGR00892 41 FFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-------GCRPVVIAGGLLASLGMILASFSSNVIELYLT 113 (455)
T ss_pred hHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-------CchHHHHhhHHHHHHHHHHHHHhhhHHHHHHH
Confidence 356677778775 455667777777788888888884432 3334444445555555555555444 234443
Q ss_pred H-HHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHH
Q 009176 437 T-AIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILW 515 (541)
Q Consensus 437 s-~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~ 515 (541)
. .+.|++.|..+....+++.|.|. |+-+...|+..++..+|..+++.+.|.+.|.. + ||.+|++.
T Consensus 114 ~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-g------------wr~~f~~~ 179 (455)
T TIGR00892 114 AGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-G------------WRGSFLIL 179 (455)
T ss_pred HHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-C------------hHHHHHHH
Confidence 3 57799999877777788899995 88899999999999999999999999999865 3 89999999
Q ss_pred HHHHHHHHHHHHHH
Q 009176 516 GSFCLFGTFLALIL 529 (541)
Q Consensus 516 ~~~~~~g~~lsl~l 529 (541)
+++++++.++.+++
T Consensus 180 ~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 180 GGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHHHHHHh
Confidence 99887776554443
No 114
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.28 E-value=1.5e-06 Score=89.23 Aligned_cols=148 Identities=15% Similarity=0.110 Sum_probs=113.1
Q ss_pred HHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHH
Q 009176 362 GQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTA 438 (541)
Q Consensus 362 g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~ 438 (541)
.++.+.+|.+ +.....++..+.+.++.+..|.+.|.. +|...+....++.+++.++.+...+ ..+++.-.
T Consensus 18 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (399)
T TIGR00893 18 PMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-------GARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRV 90 (399)
T ss_pred HHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-------CcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 4455667775 456788899999999999999884432 2333333344444555444444444 45777888
Q ss_pred HHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHH
Q 009176 439 IIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSF 518 (541)
Q Consensus 439 liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~ 518 (541)
+.|++.|..++..+++++|.+..|+-+...++......+|..+++.+++.+.|..+ ++..|.+.+.+
T Consensus 91 l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-------------~~~~~~~~~~~ 157 (399)
T TIGR00893 91 LLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-------------WQWAFIIEGVL 157 (399)
T ss_pred HHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-------------chHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887643 79999998888
Q ss_pred HHHHHHHHHHH
Q 009176 519 CLFGTFLALIL 529 (541)
Q Consensus 519 ~~~g~~lsl~l 529 (541)
+++..++.+..
T Consensus 158 ~~~~~~~~~~~ 168 (399)
T TIGR00893 158 GIIWGVLWLKF 168 (399)
T ss_pred HHHHHHHhhhe
Confidence 77766665544
No 115
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.26 E-value=7.4e-06 Score=85.35 Aligned_cols=146 Identities=16% Similarity=0.233 Sum_probs=108.4
Q ss_pred chHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHH
Q 009176 360 NLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTS 436 (541)
Q Consensus 360 n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~ 436 (541)
...++.+++|.+ +.....++..+...++.+..|.+.|.. +|...+....++.+++.++.....+ ..+++.
T Consensus 34 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-------g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 106 (405)
T TIGR00891 34 VLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-------GRRLPMVTSIVLFSAGTLACGFAPGYITMFIA 106 (405)
T ss_pred HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 345666777875 455678888888888888888884422 3444444444555555555544444 457778
Q ss_pred HHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHH
Q 009176 437 TAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWG 516 (541)
Q Consensus 437 s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~ 516 (541)
-.+.|++.|..++..++.+.|.+..|+-+...++..++..+|..+++.+++.+.+..+.. ++..|.+.+
T Consensus 107 ~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~-----------w~~~f~~~~ 175 (405)
T TIGR00891 107 RLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDG-----------WRALFFISI 175 (405)
T ss_pred HHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-----------HHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999888765422 788888765
Q ss_pred HHHHHHH
Q 009176 517 SFCLFGT 523 (541)
Q Consensus 517 ~~~~~g~ 523 (541)
...++..
T Consensus 176 ~~~~~~~ 182 (405)
T TIGR00891 176 LPIIFAL 182 (405)
T ss_pred HHHHHHH
Confidence 5544443
No 116
>TIGR00895 2A0115 benzoate transport.
Probab=98.25 E-value=2.7e-06 Score=88.04 Aligned_cols=150 Identities=18% Similarity=0.119 Sum_probs=110.8
Q ss_pred chHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHH
Q 009176 360 NLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTS 436 (541)
Q Consensus 360 n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~ 436 (541)
.+..+.+.+|.+ +.....++..+...+|.+..|.+.|.. +|...+....++..++.++.....+ ..+++.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (398)
T TIGR00895 39 AAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-------GRKRVLLWSILLFSVFTLLCALATNVTQLLIL 111 (398)
T ss_pred hHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-------hhHHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 345566677765 345667777788888999888884432 3444444444555555555544444 456677
Q ss_pred HHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHH
Q 009176 437 TAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWG 516 (541)
Q Consensus 437 s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~ 516 (541)
..+.|++.|..++..+++++|.+..++-+...++...+..+|..+++.+.|.+.|..+ ++..|.+.+
T Consensus 112 ~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-------------~~~~~~~~~ 178 (398)
T TIGR00895 112 RFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG-------------WRSLFYVGG 178 (398)
T ss_pred HHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc-------------ceeehhhhh
Confidence 8899999999999999999999999999999999999999999999999999987643 678888887
Q ss_pred HHHHHHHHHHHHH
Q 009176 517 SFCLFGTFLALIL 529 (541)
Q Consensus 517 ~~~~~g~~lsl~l 529 (541)
.++++..++....
T Consensus 179 ~~~~~~~~~~~~~ 191 (398)
T TIGR00895 179 IAPLLLLLLLMRF 191 (398)
T ss_pred hHHHHHHHHHHHh
Confidence 6666655554443
No 117
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.25 E-value=1e-05 Score=85.13 Aligned_cols=173 Identities=12% Similarity=0.073 Sum_probs=119.2
Q ss_pred chhHHHHHHHHHHhhcccceeecchHHHHhhhcCCcc-------cchhhhhhhcccccccccccchhhhcccCCCCChhH
Q 009176 337 RVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCSGT-------SSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPA 409 (541)
Q Consensus 337 ~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~~~-------~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~ 409 (541)
+.+|+.+++..++..-..-++.--+..+.+++|.++. ....++..+...++....|.+.|-. +|..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-------g~r~ 85 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-------GRKI 85 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-------CcHH
Confidence 3456676666555422222334456777788887532 3456667777888888888874422 3334
Q ss_pred HHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHH
Q 009176 410 SIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAAL 488 (541)
Q Consensus 410 ~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~ 488 (541)
.+....+..+++.++.....+ ..+++...+.|++.+ .++...+.+.|.+..++.+...++...+..+|..+++.++|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 164 (408)
T PRK09874 86 MLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGL 164 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444555555555544444 356677788888754 567777889999999999999999999999999999999999
Q ss_pred HhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 489 VYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 489 iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
+.|..+ ++.+|.+.+.+++++.++..++.
T Consensus 165 l~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 193 (408)
T PRK09874 165 LADSYG-------------LRPVFFITASVLFLCFLVTLFCI 193 (408)
T ss_pred HHHHhC-------------HHHHHHHHHHHHHHHHHHHHHHh
Confidence 988643 79999999888877776665543
No 118
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.25 E-value=3.5e-05 Score=84.08 Aligned_cols=63 Identities=11% Similarity=0.188 Sum_probs=54.7
Q ss_pred hhHHHHHHHHHhhhccchhhHHHhhhh-------cCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcC
Q 009176 432 ALYTSTAIIGVCSGAITSISVTTTTEL-------FGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEG 494 (541)
Q Consensus 432 ~l~~~s~liG~~yG~~~~l~P~ivse~-------FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~ 494 (541)
.+.+...+.|+++|..+.+.+++++|. .|.|.-|..|+...+..-+|.-+++.+.|.+.|..+
T Consensus 326 ~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 326 LIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 355667789999999999999999999 899999999999999888998888888888887554
No 119
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.25 E-value=9.3e-05 Score=81.80 Aligned_cols=154 Identities=14% Similarity=0.059 Sum_probs=97.8
Q ss_pred CCccchhHHHHHHHHHHHHhc-CCccccccchHH-HHHHhCCChhhHHHHHHhhhhhccc-chhhhhhcccc-chHHHHH
Q 009176 3 LNSNILQWLSLVGAIWLQSIN-GTNSNFPAYSSQ-LKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYL-PLWLVLL 78 (541)
Q Consensus 3 ~~~~~~rw~~l~as~~v~~~~-Gt~Y~f~~ys~~-lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~-pp~~vll 78 (541)
||.+.+++..+.....++... -+-|....+-+. +.+.+|+|+++...+-....++..+ .+++|.+.||+ |+|.++.
T Consensus 1 ~~~~~~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~il 80 (493)
T PRK15462 1 MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVM 80 (493)
T ss_pred CCccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHH
Confidence 455555555555544444332 244545444443 4677999999999887777777766 67999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC---CCceehhhHHHhhhhHHHHH
Q 009176 79 IGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF---DRQVAVGITSSYLGLSAKLY 155 (541)
Q Consensus 79 iGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~---~RG~a~gllk~~~GLSaaif 155 (541)
+|++...+|+..+.. .+. ....+.+.+.+...|+|....|..++ -.+.||+ .|+++.++--....+.+.+-
T Consensus 81 iG~il~~lg~lll~~--~~~--~~~~~~l~l~li~iG~G~~~~~~~al--v~elfp~~~~~R~sgf~i~Y~~~nlG~~ia 154 (493)
T PRK15462 81 LGALLMAIGHVVLGA--SEI--HPSFLYLSLAIIVCGYGLFKSNVSCL--LGELYEPTDPRRDGGFSLMYAAGNVGSIIA 154 (493)
T ss_pred HHHHHHHHHHHHHHH--hhc--chhHHHHHHHHHHHhcccccccHHHH--HHHHCCCCCccccceehHHHHHHHHHHHHH
Confidence 999999999976542 111 11222333334445555443333333 2377986 48888888777776655555
Q ss_pred HHHHHHH
Q 009176 156 TSAVNAI 162 (541)
Q Consensus 156 t~i~~~~ 162 (541)
..+...+
T Consensus 155 p~l~g~L 161 (493)
T PRK15462 155 PIACGYA 161 (493)
T ss_pred HHHHHHH
Confidence 4554444
No 120
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.24 E-value=3.1e-06 Score=86.86 Aligned_cols=149 Identities=13% Similarity=0.018 Sum_probs=110.7
Q ss_pred HHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHH
Q 009176 362 GQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTA 438 (541)
Q Consensus 362 g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~ 438 (541)
..+.+.+|.+ +.....++..+...++.+..|.+.|.. +|.+.+....+++.++.++.....+ ..+++.-.
T Consensus 19 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (379)
T TIGR00881 19 PYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-------NPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWA 91 (379)
T ss_pred HHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-------CCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 4566677875 456788899999999999999884432 3444444455555555555555444 45667778
Q ss_pred HHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHH-HHHHHhhhcCCCCCCCccccccccHHHHHHHHH
Q 009176 439 IIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGY-LAALVYHKEGHNAHNGKCMGMACYRSTFILWGS 517 (541)
Q Consensus 439 liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~-laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~ 517 (541)
+.|++.|..++...++++|.+..|+-+...++...+..+|..+++. +.+.+.+. .+ ++..|.+.+.
T Consensus 92 ~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------------~~~~~~~~~~ 158 (379)
T TIGR00881 92 LNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-YS------------WHWVFIVPGI 158 (379)
T ss_pred HHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-CC------------chhHHHHHHH
Confidence 9999999999999999999999999999999999999999999984 55555443 33 7888998888
Q ss_pred HHHHHHHHHHHHH
Q 009176 518 FCLFGTFLALILY 530 (541)
Q Consensus 518 ~~~~g~~lsl~l~ 530 (541)
++++..++.++..
T Consensus 159 ~~~~~~~~~~~~~ 171 (379)
T TIGR00881 159 IAIIVSLICFLLL 171 (379)
T ss_pred HHHHHHHHHheee
Confidence 7777666555443
No 121
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.23 E-value=6.3e-06 Score=86.79 Aligned_cols=156 Identities=13% Similarity=0.045 Sum_probs=117.0
Q ss_pred ceeecchHHHHhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-c
Q 009176 355 LVFLNNLGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-V 431 (541)
Q Consensus 355 lm~I~n~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~ 431 (541)
-++...+.++.+++|.++ .....++..+...++.+..|.+.|.. +|...+....+++.++.++.....+ .
T Consensus 20 ~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-------g~r~~l~~~~~~~~i~~~~~~~~~~~~ 92 (392)
T PRK10473 20 DMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-------GRKPVAIPGAALFIIASLLCSLAETSS 92 (392)
T ss_pred HHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-------CChHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 345556888888888864 44577777888888899989884432 3333444444555555555544444 3
Q ss_pred hhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHH
Q 009176 432 ALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRST 511 (541)
Q Consensus 432 ~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~t 511 (541)
.+++.-.+.|++.|..+....+++.|.+..|+-+...++......+|..+++.+++.+.|.. . |+..
T Consensus 93 ~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-g------------~~~~ 159 (392)
T PRK10473 93 LFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-P------------WQSL 159 (392)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-C------------hHHH
Confidence 46667788999999999999999999999999999999999888899888888888887653 3 8999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 009176 512 FILWGSFCLFGTFLALILY 530 (541)
Q Consensus 512 F~i~~~~~~~g~~lsl~l~ 530 (541)
|++.+.++++..++.+...
T Consensus 160 ~~~~~~~~~i~~~~~~~~~ 178 (392)
T PRK10473 160 FYTMAAMGILVLLLSLFIL 178 (392)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 9999888887777765553
No 122
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.22 E-value=7.9e-06 Score=84.46 Aligned_cols=142 Identities=14% Similarity=0.114 Sum_probs=99.5
Q ss_pred hHHHHHHHHHHhhcccceeecchHH-HHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHH
Q 009176 339 DFWLYFFVYFSGATLGLVFLNNLGQ-IAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALM 415 (541)
Q Consensus 339 ~Fwllf~~~~~g~g~Glm~I~n~g~-i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~ 415 (541)
.||..++.+++......++..-+.+ +.+++|.+ +.....++..+...++.+.+|.+.|.. +|...+.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-------g~r~~~~~~~ 74 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-------GPRYTTTLSL 74 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-------CchHHHHHHH
Confidence 5899999888876666665555564 77888886 456788888999999999999884422 4444455555
Q ss_pred HHHHHHHHHHhhcc-c-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHH
Q 009176 416 APMAGAFMLLLNET-N-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAAL 488 (541)
Q Consensus 416 ~~~~~~~ll~~~~~-~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~ 488 (541)
++++++.++..... + ..+++...+.|+.. +.+....++++|.+..|+-+...++......+|..+++.+.+.
T Consensus 75 ~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~ 148 (366)
T TIGR00886 75 LLLAIPCLWAGLAVQSYSVLLLLRLFIGIAG-GSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPP 148 (366)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-hhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHH
Confidence 66666666555554 4 34666778889884 4567778899999999999999888775555555444444333
No 123
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.22 E-value=3.3e-06 Score=91.01 Aligned_cols=152 Identities=12% Similarity=0.078 Sum_probs=119.1
Q ss_pred chHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHH
Q 009176 360 NLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTS 436 (541)
Q Consensus 360 n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~ 436 (541)
.+.++.+++|.+ +.....+...+.+.++.+..|.+.|.. +|...+....+++.++.++.....+ ..+.+.
T Consensus 24 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-------g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (485)
T TIGR00711 24 AIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-------GTRRLFLISTFAFTLGSLLCGVAPNLELMIIF 96 (485)
T ss_pred HHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-------CcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHH
Confidence 456777888875 456788889999999999999885432 4444444555556666555555544 457778
Q ss_pred HHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHH
Q 009176 437 TAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWG 516 (541)
Q Consensus 437 s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~ 516 (541)
-.+.|++.|...+...++++|.+..++-+...++......+|..+++.++|++.|..+ ++..|++.+
T Consensus 97 ~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-------------w~~~f~~~~ 163 (485)
T TIGR00711 97 RVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH-------------WRWIFLINV 163 (485)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC-------------ceehhhhhh
Confidence 8899999999999999999999999999999999999999999999999999987533 788999988
Q ss_pred HHHHHHHHHHHHHHh
Q 009176 517 SFCLFGTFLALILYA 531 (541)
Q Consensus 517 ~~~~~g~~lsl~l~~ 531 (541)
.++++..++..+...
T Consensus 164 ~~~~~~~~~~~~~~~ 178 (485)
T TIGR00711 164 PIGIIVVVVAFFILP 178 (485)
T ss_pred HHHHHHHHHHHHHcC
Confidence 888777766665533
No 124
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.18 E-value=2e-05 Score=87.08 Aligned_cols=176 Identities=16% Similarity=0.100 Sum_probs=114.6
Q ss_pred hhhhch-hHHHHHHHHHHhhcccceeecchHHH-HhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChh
Q 009176 333 LMLQRV-DFWLYFFVYFSGATLGLVFLNNLGQI-AESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSP 408 (541)
Q Consensus 333 q~l~~~-~Fwllf~~~~~g~g~Glm~I~n~g~i-~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~ 408 (541)
+.++++ .+|.+++..++...+--.+...+... .+.+|+++ +...++.........-+.+|++.|.. ++|.
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~------~G~r 88 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKV------LGTK 88 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------cchH
Confidence 444565 59999888777643321122233333 35678754 23344444433344445678874420 1455
Q ss_pred HHHHHHHHHHHHHHHHHhhccc--chhHHHHHHHHHhhhccchhhHHHhhhhcCCCc--ccchhhhhhhhhhhhHHHHHH
Q 009176 409 ASIGALMAPMAGAFMLLLNETN--VALYTSTAIIGVCSGAITSISVTTTTELFGTKN--FSVNHNIVVANIPIGSFLFGY 484 (541)
Q Consensus 409 ~~l~~~~~~~~~~~ll~~~~~~--~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~--fg~nyg~~~~a~~~Gs~l~~~ 484 (541)
..+....++++++.++++...+ ..++++-.+.|++.|...+..+++++|.|..++ .+..+++.+++..+|+.++|.
T Consensus 89 ~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~ 168 (500)
T PRK09584 89 RVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSML 168 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHH
Confidence 5555555666666666555432 235566678899999999999999999997543 455788888999999999999
Q ss_pred HHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHH
Q 009176 485 LAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLAL 527 (541)
Q Consensus 485 laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl 527 (541)
+.|++.|..+ |+..|.+.+...+++.+..+
T Consensus 169 i~g~l~~~~g-------------~~~~F~i~~i~~~i~~i~~~ 198 (500)
T PRK09584 169 ATPWLAAKYG-------------WSVAFALSVVGMLITVVNFA 198 (500)
T ss_pred HHHHHHHhhC-------------HHHHHHHHHHHHHHHHHHHH
Confidence 9999998653 89999998766666654433
No 125
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.17 E-value=0.00032 Score=77.16 Aligned_cols=389 Identities=15% Similarity=0.114 Sum_probs=205.9
Q ss_pred chHHHHHHhC--CChhhHHHH----HHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchH
Q 009176 32 YSSQLKQLLS--LSQLQLNNL----AFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSY 104 (541)
Q Consensus 32 ys~~lk~~l~--~sq~~l~~l----~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~ 104 (541)
+.+.+.+|+| .|.++++.+ -.+--+|..+ .+.+|.+.|++|++..+++..+...++=.++-.+..- ..+
T Consensus 41 ~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~----~~~ 116 (485)
T KOG0569|consen 41 INETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSA----PSF 116 (485)
T ss_pred HHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh----hhH
Confidence 4567788888 566666655 2233366655 6799999999999999999888888776666555444 245
Q ss_pred HHHHHHHHHhccccccccceeeeeecccCCCC-CceehhhHHHhhhhHHHHHHHHHHH--HhcCCCCCcccchhhhhchh
Q 009176 105 AHIFLLTVLAGNSICWINTVCYVVTIKNFPFD-RQVAVGITSSYLGLSAKLYTSAVNA--IETSSPNKRAKLYLLFNSIF 181 (541)
Q Consensus 105 w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~-RG~a~gllk~~~GLSaaift~i~~~--~~~~~~~~d~~~fLllla~~ 181 (541)
.++-+-=++.|..++-.....-.-=..-=|++ ||.+..+ .....--|-..+|+... ++ | ++|.=.+++....+
T Consensus 117 e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~-~~~~~~~g~ll~~~~~l~~il--G-t~~~W~~l~~~~~i 192 (485)
T KOG0569|consen 117 EMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTL-LQIGVVIGILLGQVLGLPSLL--G-TEDLWPYLLAFPLI 192 (485)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHH-HHHHHHHHHHHHHHHccHHhc--C-CCcchHHHHHHHHH
Confidence 66666666666554421111111111444764 9876443 33333333444443322 34 1 23444688888899
Q ss_pred hhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccc
Q 009176 182 PLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLV 261 (541)
Q Consensus 182 p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ 261 (541)
|.++.++..+++ |+++ +|+ +.. .+..
T Consensus 193 ~~~~~l~~l~~~----PESP------------k~L-------------l~~---k~~~---------------------- 218 (485)
T KOG0569|consen 193 PALLQLALLPFL----PESP------------KYL-------------LIK---KGDE---------------------- 218 (485)
T ss_pred HHHHHHHHHhcC----CCCc------------chH-------------HHH---cCCH----------------------
Confidence 998888877653 2111 111 110 0000
Q ss_pred cccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhch---
Q 009176 262 IPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQRV--- 338 (541)
Q Consensus 262 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~~--- 338 (541)
++.+ ...+..... +|++++ .+. ..++.+ +.+.+ .+++.+.+|+++++
T Consensus 219 ----~~A~-----~sl~~y~G~-~~~~~~-~e~-~~~e~~-----------~~~~~-------~~~~~sl~~~~~~~~lR 268 (485)
T KOG0569|consen 219 ----EEAR-----KALKFYRGK-EDVEAE-IEE-MLREIE-----------EEELE-------KKKQISLRQLLKNPTLR 268 (485)
T ss_pred ----HHHH-----HHHHHHhCC-CcchhH-HHH-HHHHHH-----------Hhccc-------cccCCcHHHHhcCcchh
Confidence 0000 000000000 000000 000 000000 00000 02446677777652
Q ss_pred -hHHHHHHHHHHhhcccceeecchH-HHHhhhcCC--cccchhhhhhhcccccccccccc-hhhhcccCCCCChhHHHHH
Q 009176 339 -DFWLYFFVYFSGATLGLVFLNNLG-QIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPASIGA 413 (541)
Q Consensus 339 -~Fwllf~~~~~g~g~Glm~I~n~g-~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~l~~ 413 (541)
..++...+.++-..+|...|+--+ .|-++.|.+ ++...-..+++.|....+.+.++ |++ +|...+..
T Consensus 269 ~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~--------gRRpLll~ 340 (485)
T KOG0569|consen 269 RPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL--------GRRPLLLI 340 (485)
T ss_pred HHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------CCcHHHHH
Confidence 356777777777889988776433 345666775 23445556778888888888877 554 44444443
Q ss_pred HHHHHHHHHHHHh---hcc----cchhH---HHHHHHHHhhhccc-hhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHH
Q 009176 414 LMAPMAGAFMLLL---NET----NVALY---TSTAIIGVCSGAIT-SISVTTTTELFGTKNFSVNHNIVVANIPIGSFLF 482 (541)
Q Consensus 414 ~~~~~~~~~ll~~---~~~----~~~l~---~~s~liG~~yG~~~-~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~ 482 (541)
....+.+..+++. +.. +..-| .+..+..+.|+... ++-.-+++|+|..++=++-..+....+-+..++-
T Consensus 341 ~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv 420 (485)
T KOG0569|consen 341 SLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIV 420 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHH
Confidence 4444444322221 111 11111 22233333444332 2334588999999999888887776666666555
Q ss_pred HHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009176 483 GYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTR 534 (541)
Q Consensus 483 ~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r 534 (541)
+..+=.+++.-+. ..|++-.+.|++..+..+...--||
T Consensus 421 ~~~fp~l~~~~g~--------------~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 421 GFAFPPLQNVIGP--------------YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHHHHHhcc--------------hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 5444445554332 4666666777777766666655555
No 126
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.17 E-value=1.2e-05 Score=82.38 Aligned_cols=150 Identities=17% Similarity=0.159 Sum_probs=113.0
Q ss_pred chHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHH
Q 009176 360 NLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTS 436 (541)
Q Consensus 360 n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~ 436 (541)
-..++.+++|.+ +.....++..+...++++..|.+.|.. +|...+.....+.+++.++.+...+ ..+++.
T Consensus 25 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-------G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (377)
T TIGR00890 25 LAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-------GPRAVAMLGGILYGLGFTFYAIADSLAALYLT 97 (377)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-------CccchhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666778875 456789999999999999999884432 3444444445555556555555444 356677
Q ss_pred HHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHH
Q 009176 437 TAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWG 516 (541)
Q Consensus 437 s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~ 516 (541)
-.+.|++.|..+......+.|.|. |+-+...++...+..+|+.+++.+.+.+.|.. + +|..|++.+
T Consensus 98 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~------------~~~~f~~~~ 163 (377)
T TIGR00890 98 YGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE-G------------VPAAFIYMG 163 (377)
T ss_pred HHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-c------------HHHHHHHHH
Confidence 779999999888888888999995 77899999999999999998877788777653 3 899999999
Q ss_pred HHHHHHHHHHHHHH
Q 009176 517 SFCLFGTFLALILY 530 (541)
Q Consensus 517 ~~~~~g~~lsl~l~ 530 (541)
.++++..++.+.+.
T Consensus 164 ~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 164 IIFLLVIVLGAFLI 177 (377)
T ss_pred HHHHHHHHHHHHhe
Confidence 98888777666553
No 127
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.17 E-value=3.2e-05 Score=86.09 Aligned_cols=143 Identities=16% Similarity=0.005 Sum_probs=94.1
Q ss_pred hhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcccc-hhHHHHHHHHHhhhccchhhHHH
Q 009176 376 LVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETNV-ALYTSTAIIGVCSGAITSISVTT 454 (541)
Q Consensus 376 ~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~-~l~~~s~liG~~yG~~~~l~P~i 454 (541)
..+++-.+-.+|-++++++--.+ ++ +.++...+....+..+++.+.++...+. ...+...+.|++.......+-++
T Consensus 255 ~yGll~a~~gvGai~Gal~~~~l-~~--~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~ 331 (524)
T PF05977_consen 255 GYGLLLAAFGVGAILGALLLPRL-RR--RLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTL 331 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-hc--ccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445556777766663222 22 2344444444555566666666665553 34556678899999888888888
Q ss_pred hhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009176 455 TTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTR 534 (541)
Q Consensus 455 vse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r 534 (541)
+-+.--.+..|.-.++..+....+.-++..+.|.+-|..+. +.++.+.++..+++.++.+....|.+
T Consensus 332 ~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~-------------~~al~~a~~~lll~~~~~~~~~l~~~ 398 (524)
T PF05977_consen 332 VQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGV-------------RTALLIAGAALLLSALIALRFPLRQG 398 (524)
T ss_pred HHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH-------------HHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 88887788888888877766666666677788888888765 77888887776677766665544443
No 128
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.16 E-value=4.4e-06 Score=95.01 Aligned_cols=122 Identities=15% Similarity=0.051 Sum_probs=93.6
Q ss_pred ccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHh--hhcc-------
Q 009176 30 PAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFL--THTI------- 99 (541)
Q Consensus 30 ~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~--~~~i------- 99 (541)
+.=-++++++++++.+|.-.|..+.++|..+ .++.|++.||.+++..+.+|.+...+|-++.-+.- .++.
T Consensus 53 ~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 53 NSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred HhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 3445789999999999999999999999965 89999999999988888888888888876654431 0000
Q ss_pred ---------------------------------c--cchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhh
Q 009176 100 ---------------------------------S--HLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGI 143 (541)
Q Consensus 100 ---------------------------------~--~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gl 143 (541)
. +..++.+.+.-++.|.|.+...+.+..---.|+|. +|+.+.|+
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 0 11345566788999999998888888777799987 68988887
Q ss_pred HHHhhhhH
Q 009176 144 TSSYLGLS 151 (541)
Q Consensus 144 lk~~~GLS 151 (541)
.-....++
T Consensus 213 ~~~~~~iG 220 (633)
T TIGR00805 213 LESIAVFG 220 (633)
T ss_pred HHHHHHhh
Confidence 55544443
No 129
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.15 E-value=0.0002 Score=78.90 Aligned_cols=183 Identities=17% Similarity=0.170 Sum_probs=132.7
Q ss_pred CCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHH-h-hhcCCcc--cchhhhhhhcccccccccccchhhhcccCCC
Q 009176 329 IGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIA-E-SRGCSGT--SSLVSLSSSFGFFGRLIPSLFGYFFSRSKHM 404 (541)
Q Consensus 329 ~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~-~-slg~~~~--~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~ 404 (541)
.+.+++-+.++.+...+.+++-. -|+..+..++.+- + .+|+++. ....-+..+....|=++.|+++|.. +
T Consensus 272 ~t~k~~~~~~~~~~fLia~~l~~-dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-----g 345 (477)
T PF11700_consen 272 RTFKEIRKLRQLFLFLIAYFLYS-DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-----G 345 (477)
T ss_pred HHHHHHHhChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----C
Confidence 35666777777777666655543 4555555555553 3 4788643 3455566778889999999996643 1
Q ss_pred CCh--hHHHHHHHHHHHHHHHHHh--------hcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhh
Q 009176 405 IPS--PASIGALMAPMAGAFMLLL--------NETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVAN 474 (541)
Q Consensus 405 ~~R--~~~l~~~~~~~~~~~ll~~--------~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a 474 (541)
+| ...+........+....+. ...+..+|+..+++|++.|+..+..=++.+|+=-..+-+.-||+-.+.
T Consensus 346 -~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~ 424 (477)
T PF11700_consen 346 -PKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAIT 424 (477)
T ss_pred -CchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence 23 3332222222222222221 112246999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 475 IPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 475 ~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
.=..++++|.+.|.+-|.+++ .|..|....++.++|.++-..+.
T Consensus 425 gk~ss~lGPll~g~i~~~tg~------------~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 425 GKASSWLGPLLFGLITDATGS------------QRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCC------------chhHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999998 79999999999999988776553
No 130
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.15 E-value=1.6e-05 Score=86.50 Aligned_cols=175 Identities=13% Similarity=-0.015 Sum_probs=116.2
Q ss_pred hhHHHHHHHHHHhhcccceeec----chHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHH
Q 009176 338 VDFWLYFFVYFSGATLGLVFLN----NLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASI 411 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Glm~I~----n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l 411 (541)
..||..|...+++-..-.+.-+ -..++.+++|.+ +.....+...+...++.+.+|.+.|-. +|.+.+
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-------g~r~~l 97 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-------NTKQFL 97 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-------CccchH
Confidence 4477666666665443221111 245667778875 445678888888889999999884421 344444
Q ss_pred HHHHHHHHHHHHHHh-----hccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHH
Q 009176 412 GALMAPMAGAFMLLL-----NETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYL 485 (541)
Q Consensus 412 ~~~~~~~~~~~ll~~-----~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~l 485 (541)
....++.+++.+++. ...+ ..+++.-.+.|++.|..++...++++|+|..|+.|...|+...+..+|..+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i 177 (467)
T PRK09556 98 PFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGV 177 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHH
Confidence 333333333322222 2233 3466677789999999999999999999999999999999999999999999888
Q ss_pred HHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 486 AALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 486 aG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
+.++.+..-. ...+..|.+.+.++++..++.+.+
T Consensus 178 ~~~~~~~~~~----------~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 178 ALWGANYFFD----------GHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred HHHHHHhhcc----------CcchhHHHHHHHHHHHHHHHHHHh
Confidence 7777654211 015777888777766655555444
No 131
>PRK11043 putative transporter; Provisional
Probab=98.14 E-value=1.4e-05 Score=84.37 Aligned_cols=154 Identities=14% Similarity=0.090 Sum_probs=114.5
Q ss_pred eeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-ch
Q 009176 356 VFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VA 432 (541)
Q Consensus 356 m~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~ 432 (541)
++.-.+.++.+++|.+ +.....++..+...++.+.+|.+.|.. +|...+....++..++.++.....+ ..
T Consensus 24 ~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-------g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (401)
T PRK11043 24 MYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-------GRKPVLLAGLSLFALGSLGMLWVESAAQ 96 (401)
T ss_pred HHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-------CCcHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 3444667788888875 456788888888899999999885432 2333344444445555554444444 34
Q ss_pred hHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHH
Q 009176 433 LYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTF 512 (541)
Q Consensus 433 l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF 512 (541)
+.+.-.+.|++.|.......+.++|.|..++.+..++.......+|..+++.+.|.+.|..+ ++..|
T Consensus 97 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-------------~~~~~ 163 (401)
T PRK11043 97 LLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-------------WQAIF 163 (401)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------------hHHHH
Confidence 66667888998888888888999999999998888998888888999999999999998653 79999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009176 513 ILWGSFCLFGTFLALIL 529 (541)
Q Consensus 513 ~i~~~~~~~g~~lsl~l 529 (541)
.+.+.+.++..++.+.+
T Consensus 164 ~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 164 ATLFAITLLLILPTLRL 180 (401)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 99988877776665544
No 132
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.11 E-value=1.6e-05 Score=84.75 Aligned_cols=143 Identities=10% Similarity=0.049 Sum_probs=107.0
Q ss_pred HhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHH
Q 009176 365 AESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIG 441 (541)
Q Consensus 365 ~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG 441 (541)
.+.+|.+ ...+..++..+...+.++.+|.+.|-. +|...+....++.+++.++.....+ ..+++...+.|
T Consensus 38 ~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-------g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 110 (400)
T PRK11646 38 VDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-------GAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSG 110 (400)
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-------CchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4566765 345666666777777788888874422 4444555555566666655555444 45777778889
Q ss_pred HhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHH
Q 009176 442 VCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLF 521 (541)
Q Consensus 442 ~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~ 521 (541)
++.|...+...+++.|.+..++.+..+|+......+|..+++.++|.+.+. . ++..|.+.+..+++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~--g------------~~~~f~~~~~~~~~ 176 (400)
T PRK11646 111 LGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQY--D------------FRLVCATGAVLFVL 176 (400)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--h------------HHHHHHHHHHHHHH
Confidence 998888888889999999999999999999999999999999999999832 4 89999998888777
Q ss_pred HHHHHHH
Q 009176 522 GTFLALI 528 (541)
Q Consensus 522 g~~lsl~ 528 (541)
..++..+
T Consensus 177 ~~i~~~~ 183 (400)
T PRK11646 177 AAAFNAW 183 (400)
T ss_pred HHHHHHH
Confidence 6655443
No 133
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.11 E-value=3.4e-05 Score=81.92 Aligned_cols=165 Identities=14% Similarity=0.107 Sum_probs=121.0
Q ss_pred hHHHHHHHHHHhhccccee--ec-chHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHH
Q 009176 339 DFWLYFFVYFSGATLGLVF--LN-NLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGA 413 (541)
Q Consensus 339 ~Fwllf~~~~~g~g~Glm~--I~-n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~ 413 (541)
.-|++...+.++.-..+++ ++ -+.+|.+++|.+ +....+|+..+...++-+..|.+.|.. +|...+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-------G~r~~l~~ 79 (393)
T PRK09705 7 LNFMLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-------SERRSVAI 79 (393)
T ss_pred hHHHHHHHHHHHHHcchhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-------CchHHHHH
Confidence 3577777777776665443 22 244566667765 445677777777777777788774421 56666666
Q ss_pred HHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhh
Q 009176 414 LMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHK 492 (541)
Q Consensus 414 ~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~ 492 (541)
.+++.+++.++.++.++ ..+++.-.+.|++.|..+...++++.|.|. ++.+...|+...+..+|..+++.+.+.+.+.
T Consensus 80 ~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~ 158 (393)
T PRK09705 80 SLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH 158 (393)
T ss_pred HHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77777777777766655 467778899999999999999999999996 7889999998888888888888888888876
Q ss_pred cCCCCCCCccccccccHHHHHHHHHHHHHHH
Q 009176 493 EGHNAHNGKCMGMACYRSTFILWGSFCLFGT 523 (541)
Q Consensus 493 ~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~ 523 (541)
... +|.+|.+.+...++..
T Consensus 159 ~~~------------w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 159 SET------------WYQTLAWWALPAVVAL 177 (393)
T ss_pred cCC------------HHHHHHHHHHHHHHHH
Confidence 545 7888877766554443
No 134
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.10 E-value=9e-06 Score=86.51 Aligned_cols=166 Identities=11% Similarity=0.046 Sum_probs=117.3
Q ss_pred chhHHHHHHHHHHhhcccceeecchHHHHhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHH
Q 009176 337 RVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGAL 414 (541)
Q Consensus 337 ~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~ 414 (541)
+++||.+++..++..-...++...+..+.++++.++ ....++...+...+.-..+|.+.|.. +|...+...
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-------grr~vl~~~ 74 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-------PKGRVMFIA 74 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-------CCchhhHHH
Confidence 568999998888865433344555556666776643 34566677777778888888884422 344444444
Q ss_pred HHHHHHHHHHHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcC
Q 009176 415 MAPMAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEG 494 (541)
Q Consensus 415 ~~~~~~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~ 494 (541)
.++..++.++.....+ .++.-.+.|++.|...+..-+++.|++..|+.+...+++.+...+|..++|.++|.++|..
T Consensus 75 ~~~~~~~~~~~~~~~~--~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~- 151 (393)
T PRK11195 75 NGIKLLGCLLMLFGIH--PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH- 151 (393)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 4444444333322222 2455578899999999999999999999999999999999999999999999999999852
Q ss_pred CCCCCCccccccccHHHHHHHHHHHHHHHHH
Q 009176 495 HNAHNGKCMGMACYRSTFILWGSFCLFGTFL 525 (541)
Q Consensus 495 ~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~l 525 (541)
++.+|.+.+.+.+++.++
T Consensus 152 -------------~~~~~~i~~~~~~~~~~~ 169 (393)
T PRK11195 152 -------------AEAALAVCALIYLLAALF 169 (393)
T ss_pred -------------HHHHHHHHHHHHHHHHHH
Confidence 678887777665555443
No 135
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.05 E-value=1.4e-05 Score=85.19 Aligned_cols=174 Identities=13% Similarity=0.143 Sum_probs=105.9
Q ss_pred HhhhhchhHHHHHHHHHHhhcccceeecchHHHHh-hhcCC--cccchhhhhhhcccccccccccc-hhhhcccCCCCCh
Q 009176 332 MLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAE-SRGCS--GTSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPS 407 (541)
Q Consensus 332 ~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~-slg~~--~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R 407 (541)
.++.++++||.+++.+++...+--.+..-+....+ .+|++ +....+++..+...+++...|.+ |++. +|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g-------~r 76 (420)
T PRK09528 4 MYYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLG-------LK 76 (420)
T ss_pred chhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------ch
Confidence 35677889999987777665422122333333333 36775 45779999999999999999988 4442 23
Q ss_pred hHHHHHHHHHHHHH---HHHHhhcc----cc--hhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhh
Q 009176 408 PASIGALMAPMAGA---FMLLLNET----NV--ALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIG 478 (541)
Q Consensus 408 ~~~l~~~~~~~~~~---~ll~~~~~----~~--~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~G 478 (541)
+..+. .....++. ........ .. ...++....|.++....+.....+.+. .++.+..||.......+|
T Consensus 77 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g 153 (420)
T PRK09528 77 KHLLW-IISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLG 153 (420)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHH
Confidence 33222 11111111 11111110 11 122334445555555555555555433 456788889888888999
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 479 SFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 479 s~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
..+++.++|.++|. . ++..|++.+.++++..++.+.+
T Consensus 154 ~~i~~~~~g~l~~~--~------------~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 154 WALCAFIAGILFNI--N------------PQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred HHHHHHHHHHHHhc--C------------chHhHHHHHHHHHHHHHHHhcc
Confidence 99999999999985 3 6788988888877766665544
No 136
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.04 E-value=2e-05 Score=85.51 Aligned_cols=162 Identities=14% Similarity=0.116 Sum_probs=117.1
Q ss_pred hhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHH
Q 009176 338 VDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALM 415 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~ 415 (541)
..++.+++.+++-.-...+....+.++.+.+|.+ +....+++..+...++.+..|.+.|.. +|...+....
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-------g~r~~~~~~~ 92 (496)
T PRK03893 20 KAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-------GRRLAMVISI 92 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CcHHHHHHHH
Confidence 3555666665553333333333456777778875 356788888888888888888885432 3444444555
Q ss_pred HHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcC
Q 009176 416 APMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEG 494 (541)
Q Consensus 416 ~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~ 494 (541)
++.+++.++.....+ ..+++.-.+.|++.|..++...+++.|.|..|+-+.-.++...+..+|..+++.+++.+.|..
T Consensus 93 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~- 171 (496)
T PRK03893 93 VLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW- 171 (496)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 555566555555444 457778889999999999999999999999999999999999999999999999999988743
Q ss_pred CCCCCCccccccccHHHHHHHHHHH
Q 009176 495 HNAHNGKCMGMACYRSTFILWGSFC 519 (541)
Q Consensus 495 ~~~~~~~C~G~~CY~~tF~i~~~~~ 519 (541)
. ++..|.+....+
T Consensus 172 ~------------w~~~f~~~~~~~ 184 (496)
T PRK03893 172 G------------WRALFFIGILPI 184 (496)
T ss_pred C------------HHHHHHHHHHHH
Confidence 3 788888754433
No 137
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.03 E-value=2.3e-05 Score=82.64 Aligned_cols=147 Identities=15% Similarity=0.091 Sum_probs=107.1
Q ss_pred HHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHH
Q 009176 362 GQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTA 438 (541)
Q Consensus 362 g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~ 438 (541)
.++.+++|.+ +.....+...+...+|.+..|.+.|.. +|...+.....+..++.++.....+ ..+.+.-.
T Consensus 39 ~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (406)
T PRK11551 39 PRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-------GRKRILIVSVALFGLFSLATAQAWDFPSLLVARL 111 (406)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4566777775 356677888888888888888885432 3334343344444444444444444 45667788
Q ss_pred HHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHH
Q 009176 439 IIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSF 518 (541)
Q Consensus 439 liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~ 518 (541)
+.|++.|..++..++++.|.|..|+-++..|+...+..+|..+++.+.+.+.+.. . ++..|++.+.+
T Consensus 112 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~------------~~~~~~~~~~~ 178 (406)
T PRK11551 112 LTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA-A------------WRHIFYVGGVG 178 (406)
T ss_pred HHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-C------------HHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988887776543 2 78999988776
Q ss_pred HHHHHHHHHH
Q 009176 519 CLFGTFLALI 528 (541)
Q Consensus 519 ~~~g~~lsl~ 528 (541)
.++..++...
T Consensus 179 ~~~~~~~~~~ 188 (406)
T PRK11551 179 PLLLVPLLMR 188 (406)
T ss_pred HHHHHHHHHH
Confidence 6555544443
No 138
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.03 E-value=2.8e-05 Score=85.36 Aligned_cols=151 Identities=11% Similarity=-0.013 Sum_probs=116.4
Q ss_pred chHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHH
Q 009176 360 NLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTS 436 (541)
Q Consensus 360 n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~ 436 (541)
.+.+|.+++|.+ +.+..++...+....+-+.+|.+.|.. +|...+....+++.++.++.....+ ..+.++
T Consensus 28 a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-------Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~ 100 (495)
T PRK14995 28 AAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-------GFKRLLMLGGTLFGLASLAAAFSPTASWLIAT 100 (495)
T ss_pred HHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 367788888864 456788888888888888888885532 5666666666666666666655555 456777
Q ss_pred HHHHHHhhhccchhhHHHhhhhc-CCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHH
Q 009176 437 TAIIGVCSGAITSISVTTTTELF-GTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILW 515 (541)
Q Consensus 437 s~liG~~yG~~~~l~P~ivse~F-G~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~ 515 (541)
-.+.|++.|..++...+++.+.| ..|+-+...|+......+|..++|.++|.+.|.. + +|..|++.
T Consensus 101 r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~-g------------wr~~f~i~ 167 (495)
T PRK14995 101 RALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF-Y------------WGSVFLIN 167 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-C------------hHHHHHHH
Confidence 78999999987777777777777 6789999999999999999999999999998864 3 89999999
Q ss_pred HHHHHHHHHHHHHHH
Q 009176 516 GSFCLFGTFLALILY 530 (541)
Q Consensus 516 ~~~~~~g~~lsl~l~ 530 (541)
..++++..++.....
T Consensus 168 ~~~~~~~~~l~~~~l 182 (495)
T PRK14995 168 VPIVLVVMGLTARYV 182 (495)
T ss_pred HHHHHHHHHHHHHhC
Confidence 888877776665553
No 139
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.00 E-value=0.00055 Score=72.24 Aligned_cols=371 Identities=18% Similarity=0.157 Sum_probs=209.7
Q ss_pred CCCc-cchhHHHHHHHHHHHHhcCC-ccccccchHHHHHHhCCChhhHHHHHHhhhhhc-ccchhhhhhccccchHHHHH
Q 009176 2 PLNS-NILQWLSLVGAIWLQSINGT-NSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGK-LFGWISGVASVYLPLWLVLL 78 (541)
Q Consensus 2 ~~~~-~~~rw~~l~as~~v~~~~Gt-~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~-~~G~~~Gll~d~~pp~~vll 78 (541)
|++. ..++|+.+.+-++|..--=+ .-..+--=+++++.+|+|-++...|.+---+-- .+.+.+.-+.-|++++..+.
T Consensus 2 ~~~~~~~~~~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~ 81 (395)
T COG2807 2 PTADMKGRPLLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLF 81 (395)
T ss_pred CccccccCchHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHH
Confidence 4444 33345555555554432111 122344457889999999999888876655544 45788888999999999988
Q ss_pred HHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeec--ccCCCCCceehhhHHHhhhhHHHHHH
Q 009176 79 IGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTI--KNFPFDRQVAVGITSSYLGLSAKLYT 156 (541)
Q Consensus 79 iGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v--~NFP~~RG~a~gllk~~~GLSaaift 156 (541)
.+-++..+|-.+ +.. .+.+.+.+-..++|.|..-.| ++.=++ |+||++-|..+|+=.-..++.++.=+
T Consensus 82 ~~Llli~~G~~i------R~~--~~~~~L~~gt~l~G~gIav~n--VLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa 151 (395)
T COG2807 82 LALLLIAAGILI------RSL--GGLPLLFLGTLLAGAGIAVIN--VLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAA 151 (395)
T ss_pred HHHHHHHHHHHH------Hhc--ccHHHHHHHHHHHHhhHHHHH--HhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHh
Confidence 888777777422 211 245778888889999888333 112222 99999999888876666666665544
Q ss_pred HHHHHHhcCCCCCcccchhhhhchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhccc
Q 009176 157 SAVNAIETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDL 236 (541)
Q Consensus 157 ~i~~~~~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~ 236 (541)
.+.--+- + .. .... .+++...+
T Consensus 152 ~lavpla-------------------------------------~-------~~--~gW~------~aL~~WAl------ 173 (395)
T COG2807 152 ALAVPLA-------------------------------------Q-------HS--GGWR------GALGFWAL------ 173 (395)
T ss_pred hhhhHHH-------------------------------------H-------hh--ccHH------HHHHHHHH------
Confidence 4332221 0 00 0000 00000000
Q ss_pred ccccCCCCchhHHHHHHHHhhhccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCC
Q 009176 237 SKLKTLLPPVKNLIGIVICLLAPLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDS 316 (541)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~ll~~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (541)
...+.+++-.|- . .| +. . ++. ....
T Consensus 174 ------------~allAl~~WlPq----~---------~r----~~-~-------------~~~-----------~~~~- 198 (395)
T COG2807 174 ------------LALLALLIWLPQ----A---------LR----EQ-A-------------ASI-----------ATKL- 198 (395)
T ss_pred ------------HHHHHHHHHhhh----c---------cc----cc-c-------------ccc-----------cccc-
Confidence 000011111120 0 00 00 0 000 0000
Q ss_pred CCccCCCCccccCCHHhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccc
Q 009176 317 DGIYHGLGAKEEIGAMLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLF 394 (541)
Q Consensus 317 ~~~~~~~~~~~d~t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~ 394 (541)
.+-...+|++.=|.+-+-|.+....=-..+.=+.+|..+.|++ ++..++|+..+.....-+..-.+
T Consensus 199 ------------~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~l 266 (395)
T COG2807 199 ------------VSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLL 266 (395)
T ss_pred ------------ccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 1113466777778776666554433333455778899999996 45678888887776666554333
Q ss_pred -hhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhh
Q 009176 395 -GYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVA 473 (541)
Q Consensus 395 -s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~ 473 (541)
++. +=.|++.+. ..+.+.++.+=+.+......+....++|+.-|+.|++.-..+.+..-..+-..- +--+
T Consensus 267 a~R~------~n~r~~~~~-~~~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~--LSgm 337 (395)
T COG2807 267 ARRS------KNQRPLVVL-ALLLMLVGLVGLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAA--LSGM 337 (395)
T ss_pred HHHh------cccchHHHH-HHHHHHHHHHHHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHH--HHHH
Confidence 331 124555433 334444444322222222233336999999999999988888777654443221 1223
Q ss_pred hhhhhHHH---HHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHH
Q 009176 474 NIPIGSFL---FGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALI 528 (541)
Q Consensus 474 a~~~Gs~l---~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~ 528 (541)
+.++|-.+ +|.+.|+++|.+++ |+..+...+...++-.+..+.
T Consensus 338 aQg~GYllAa~GP~l~G~lhDa~gs------------w~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 338 AQGVGYLLAAFGPWLFGFLHDATGS------------WSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred hhhhhHHHHhhhhhhHhHHHHhcCC------------hHHHHHHHHHHHHHHHHHHhh
Confidence 44455433 48899999999999 999988887765555544443
No 140
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.97 E-value=1.3e-05 Score=85.39 Aligned_cols=176 Identities=16% Similarity=0.112 Sum_probs=114.9
Q ss_pred HhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhH
Q 009176 332 MLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPA 409 (541)
Q Consensus 332 ~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~ 409 (541)
+...++++|+.+++..++.....-+..--+..+.++++.+ +.....+...+...++.+..|.+.|.. +|..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-------g~~~ 83 (417)
T PRK10489 11 SLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-------DRKK 83 (417)
T ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-------CCce
Confidence 4445688888887775444322122222344455666554 345677778888888888888774432 1221
Q ss_pred HHHHHHHHHHHHHHHHh-----hccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHH
Q 009176 410 SIGALMAPMAGAFMLLL-----NETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFG 483 (541)
Q Consensus 410 ~l~~~~~~~~~~~ll~~-----~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~ 483 (541)
.+....++.+++.+.++ ...+ ..+++...+.|++.|...+...+.+.|.+..++.+...++..+...+|..+++
T Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 163 (417)
T PRK10489 84 LILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISP 163 (417)
T ss_pred EEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHH
Confidence 12112222222222211 1222 34666777889999888888888999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHH
Q 009176 484 YLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLAL 527 (541)
Q Consensus 484 ~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl 527 (541)
.++|.++|..+ ++..|.+.+.+++++.++.+
T Consensus 164 ~l~g~l~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 194 (417)
T PRK10489 164 ALGGLLIAAGG-------------VAWNYGLAAAGTFITLLPLL 194 (417)
T ss_pred HHHHHHHHHHh-------------hHHHHHHHHHHHHHHHHHHH
Confidence 99999998643 68888888777666555443
No 141
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.97 E-value=6.9e-05 Score=81.12 Aligned_cols=148 Identities=12% Similarity=0.011 Sum_probs=102.0
Q ss_pred HHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhc----cc-chhHH
Q 009176 363 QIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNE----TN-VALYT 435 (541)
Q Consensus 363 ~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~----~~-~~l~~ 435 (541)
.+.+. |.+ +....++...+...++.+.+|.+.|.. +|..++....++.+++.++.+.. .+ ..+++
T Consensus 54 ~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-------g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 125 (452)
T PRK11273 54 YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-------NPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFV 125 (452)
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-------CCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHH
Confidence 34444 664 456688899999999999999884422 34444544555555554444332 12 23555
Q ss_pred HHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHH
Q 009176 436 STAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILW 515 (541)
Q Consensus 436 ~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~ 515 (541)
.-.+.|++.|..++....+++|.|..|+-++..|+...+..+|+.+.+++.+...+.... ++..|++.
T Consensus 126 ~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g------------w~~~f~i~ 193 (452)
T PRK11273 126 LLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND------------WHAALYMP 193 (452)
T ss_pred HHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc------------HHHHHHHH
Confidence 667889999998888888999999999999999999999888875554444322222234 89999999
Q ss_pred HHHHHHHHHHHHHHH
Q 009176 516 GSFCLFGTFLALILY 530 (541)
Q Consensus 516 ~~~~~~g~~lsl~l~ 530 (541)
+.++++..++.+++.
T Consensus 194 ~~~~~~~~~l~~~~~ 208 (452)
T PRK11273 194 AFAAILVALFAFAMM 208 (452)
T ss_pred HHHHHHHHHHHHHHc
Confidence 888877766665554
No 142
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.94 E-value=0.00045 Score=76.15 Aligned_cols=146 Identities=18% Similarity=0.037 Sum_probs=106.2
Q ss_pred ccchHHHH-HHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHH
Q 009176 30 PAYSSQLK-QLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHI 107 (541)
Q Consensus 30 ~~ys~~lk-~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l 107 (541)
+.||.... +..+.+....+......-+|..+ +++.|.+.|++|++.+++++.++..++= +..+. ++.+|..
T Consensus 102 ~~~s~~~~~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~--~~~a~-----a~~~~~~ 174 (521)
T KOG0255|consen 102 SVYSIVSEWNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFG--ILTAF-----APNYWMF 174 (521)
T ss_pred CcccccchhceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHH--HHHHH-----hCcHHHH
Confidence 45555554 67778888888888888899977 7899999999999999998877776653 22222 2467999
Q ss_pred HHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHhH
Q 009176 108 FLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLAC 186 (541)
Q Consensus 108 ~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v~ 186 (541)
+++-++.|.+.+-..+.+.+..+..++. +|+.+..+ ..+-.++.++.....+++- + .=..+......|..+.
T Consensus 175 ~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~--~~~~~~~~~~~~~~~a~~~----~-~Wr~~~~~~~~~~~~~ 247 (521)
T KOG0255|consen 175 LIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL--GGFFFVGGLMLPAGAAYIT----R-DWRWLFWIISIPSGLF 247 (521)
T ss_pred HHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH--HHHHHHHHHHHHHHHHHHH----h-hHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999955 79999888 4444555555555555541 2 3444555555566555
Q ss_pred hhc
Q 009176 187 VVT 189 (541)
Q Consensus 187 l~~ 189 (541)
++.
T Consensus 248 ~~~ 250 (521)
T KOG0255|consen 248 LLL 250 (521)
T ss_pred HHH
Confidence 444
No 143
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.94 E-value=5.4e-05 Score=80.43 Aligned_cols=137 Identities=15% Similarity=0.082 Sum_probs=103.8
Q ss_pred chHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHH
Q 009176 360 NLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTS 436 (541)
Q Consensus 360 n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~ 436 (541)
.+..|.+++|.+ +.....++..+...+|.+..|.+.|.. +|...+....++++++.++.....+ ..+++.
T Consensus 40 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-------g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 112 (426)
T PRK12307 40 IMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-------GRKPLMMWSIVAYSVGTGLSGLASGVIMLTLS 112 (426)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 334555677775 345667777777778888888874421 5556555566666666655555544 457778
Q ss_pred HHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHH
Q 009176 437 TAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWG 516 (541)
Q Consensus 437 s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~ 516 (541)
-.+.|++.|..++...++++|.|..|+-+...|+...+..+|..+++.+.+.+.|.. + +|..|++..
T Consensus 113 r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~-~------------w~~~f~i~~ 179 (426)
T PRK12307 113 RFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY-G------------WRAAFFVGL 179 (426)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC-C------------HHHHHHHHH
Confidence 889999999999999999999999999999999999999999999988888887643 3 789998754
No 144
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.93 E-value=4.6e-05 Score=80.59 Aligned_cols=168 Identities=15% Similarity=0.169 Sum_probs=108.2
Q ss_pred chhHHHHHHHHHHhhc-ccceeecchHH-HHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHH
Q 009176 337 RVDFWLYFFVYFSGAT-LGLVFLNNLGQ-IAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIG 412 (541)
Q Consensus 337 ~~~Fwllf~~~~~g~g-~Glm~I~n~g~-i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~ 412 (541)
|++||.+...+++... .+.... -+.. +.+.+|++ +....+++.++...++++..|.++|.. +|...+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-------grr~~~~ 72 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFP-FFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-------GLKKHLL 72 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CcHHHHH
Confidence 5789999655555433 233222 2333 33456775 456799999999999999999985532 3333322
Q ss_pred HHHHHHHHH---HHHHhhcc----c--chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHH
Q 009176 413 ALMAPMAGA---FMLLLNET----N--VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFG 483 (541)
Q Consensus 413 ~~~~~~~~~---~ll~~~~~----~--~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~ 483 (541)
..+...+++ .+.+.... + ..+.+..++.|++++...+...+.+.|. .|+.+.+||.......+|..+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~g~ 150 (396)
T TIGR00882 73 WIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKV--SRNSNFEYGKARMFGCVGWALCA 150 (396)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHh--hhhcccccchhhhhcccHHHHHH
Confidence 222222211 11111111 1 1234456778888988888888888775 35556788888888889999999
Q ss_pred HHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHH
Q 009176 484 YLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALI 528 (541)
Q Consensus 484 ~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~ 528 (541)
.++|.++|. + ++..|++.+.++++..++.+.
T Consensus 151 ~~~g~l~~~--~------------~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 151 SIAGILFSI--D------------PQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred HHHhhhhcc--C------------chHHHHHHHHHHHHHHHHHHH
Confidence 999999874 3 788999998888777665544
No 145
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.93 E-value=8.4e-05 Score=82.14 Aligned_cols=140 Identities=16% Similarity=0.096 Sum_probs=96.7
Q ss_pred hhhcCC--cccchhhhhhhcccccccccccc-hhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcc-c-chhHHHHHHH
Q 009176 366 ESRGCS--GTSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNET-N-VALYTSTAII 440 (541)
Q Consensus 366 ~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~-~-~~l~~~s~li 440 (541)
+.+|++ ++....+...+...++-+.+|++ |+++ +|...+.+..+++.++++++.... + ..++++..++
T Consensus 38 ~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRil-------Grrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li 110 (493)
T PRK15462 38 NQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVL-------GNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAII 110 (493)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------CcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Confidence 346775 34567777888888899999998 5442 444444455555666665554332 2 3355566677
Q ss_pred HHhhhccchhhHHHhhhhcCCC--cccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHH
Q 009176 441 GVCSGAITSISVTTTTELFGTK--NFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSF 518 (541)
Q Consensus 441 G~~yG~~~~l~P~ivse~FG~k--~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~ 518 (541)
+++.|...+..+++++|.|..+ .-.+-+++.+....+|+.++|.+.|++-|..+ |+..|.+.+..
T Consensus 111 ~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G-------------w~~~F~iaaig 177 (493)
T PRK15462 111 VCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS-------------WAMGFGLAAVG 177 (493)
T ss_pred HHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC-------------hHHHHHHHHHH
Confidence 7788888888899999999875 35556777776666899999999999976543 89999887665
Q ss_pred HHHHHHH
Q 009176 519 CLFGTFL 525 (541)
Q Consensus 519 ~~~g~~l 525 (541)
.+++.+.
T Consensus 178 m~l~li~ 184 (493)
T PRK15462 178 MIAGLVI 184 (493)
T ss_pred HHHHHHH
Confidence 5444443
No 146
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.91 E-value=6.6e-05 Score=84.43 Aligned_cols=177 Identities=14% Similarity=0.070 Sum_probs=125.3
Q ss_pred hchhHHHHHHHHHHhhcc---cceee-cchHHHHhhhcCC-cccchhhhhhhcccccccccccchhhhcccCCCCChhHH
Q 009176 336 QRVDFWLYFFVYFSGATL---GLVFL-NNLGQIAESRGCS-GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPAS 410 (541)
Q Consensus 336 ~~~~Fwllf~~~~~g~g~---Glm~I-~n~g~i~~slg~~-~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~ 410 (541)
+++.|+..|..+.+..-. ++..- +-+.+|.+++|-+ +.+.++...++.+..+-.+.|-+||++ +|.+.
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlf-------GRr~~ 110 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLF-------GRRYF 110 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHh-------cchHH
Confidence 556777776655554322 22222 2357788888875 455666677777777777788888875 88898
Q ss_pred HHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHH
Q 009176 411 IGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALV 489 (541)
Q Consensus 411 l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~i 489 (541)
+.+..++.+++.+..+...+ ..+..+.++.|+++|.+.. ....++|+.-.|+-..-+.+......+....++.++..+
T Consensus 111 ~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~ 189 (599)
T PF06609_consen 111 FIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLF 189 (599)
T ss_pred HHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHh
Confidence 88888888888888877766 4677788999999998874 566689999988887666555544444444455666555
Q ss_pred hhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009176 490 YHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYART 533 (541)
Q Consensus 490 yD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~ 533 (541)
+. +++ +|..|++.+..+.+++++..+.+++.
T Consensus 190 ~~-~~~------------WRw~~~~~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 190 AA-HSG------------WRWIFYIFIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred cc-CCC------------cchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 43 445 99999999999888888777665443
No 147
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.90 E-value=7.4e-05 Score=78.98 Aligned_cols=134 Identities=13% Similarity=0.025 Sum_probs=96.2
Q ss_pred ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhc-cc-c--hhHHHHHHHHHhhhccc
Q 009176 373 TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNE-TN-V--ALYTSTAIIGVCSGAIT 448 (541)
Q Consensus 373 ~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~-~~-~--~l~~~s~liG~~yG~~~ 448 (541)
.....++..+...++.+.+|.+.|.. +|...+....++..++.++.... .. . .+++.-.+.|++.|..+
T Consensus 73 ~~~~~~~~~~~~~i~~~~~g~l~d~~-------grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 145 (481)
T TIGR00879 73 WGLVVSIFLVGGFIGALFAGWLSDRF-------GRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIAS 145 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhh-------hhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHH
Confidence 45677888888889999988884432 44444444444455554443222 21 2 57778899999999999
Q ss_pred hhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHH---HHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHH
Q 009176 449 SISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLA---ALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFL 525 (541)
Q Consensus 449 ~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~la---G~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~l 525 (541)
....++++|.+..|+-+...++...+..+|..+++.+. +...+ ... +|..|.+.+..+++..+.
T Consensus 146 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~------------w~~~f~~~~~~~~~~~~~ 212 (481)
T TIGR00879 146 ALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNN-TLG------------WRIPLGLQLIPAGLLFLG 212 (481)
T ss_pred hHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCC-Ccc------------HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998777 33322 223 899999966655555444
Q ss_pred H
Q 009176 526 A 526 (541)
Q Consensus 526 s 526 (541)
.
T Consensus 213 ~ 213 (481)
T TIGR00879 213 L 213 (481)
T ss_pred H
Confidence 3
No 148
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.90 E-value=0.00033 Score=76.74 Aligned_cols=111 Identities=20% Similarity=0.120 Sum_probs=77.4
Q ss_pred HhcCCcc-ccccchHHHHHHhCCChhhHHHHHHhhhhhcccchhhhhhccccc-----hHHHHHHHHHHH-HHHHHHHHH
Q 009176 21 SINGTNS-NFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLFGWISGVASVYLP-----LWLVLLIGSTLG-LIGYGLQYL 93 (541)
Q Consensus 21 ~~~Gt~Y-~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~G~~~Gll~d~~p-----p~~vlliGa~~~-~~GY~~~~l 93 (541)
.+-|-.+ ....-++-+|+++|+|.+|+..+.....+.-.+..+.|.+.|++| ++..++++.+.. +..|..+-
T Consensus 36 ~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~- 114 (468)
T TIGR00788 36 FVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLP- 114 (468)
T ss_pred HHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcc-
Confidence 3444442 233667899999999999999998889999999888999999998 667777887776 45554332
Q ss_pred HhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCCCC
Q 009176 94 FLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPFDR 137 (541)
Q Consensus 94 ~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~R 137 (541)
.. ++ ..+...+.+++.+.+.+..|.++=---++..|+.+
T Consensus 115 -~~---~~-~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~ 153 (468)
T TIGR00788 115 -GK---VS-SAKVAAAFIFLAALAKALYDVLVDSLYSERIRESP 153 (468)
T ss_pred -cc---cc-hHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCC
Confidence 11 11 12333345777888888777776666667777443
No 149
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.90 E-value=9.6e-05 Score=79.11 Aligned_cols=171 Identities=18% Similarity=0.177 Sum_probs=138.1
Q ss_pred HHHHHHHHHhhcccceeecchHHHHhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHH
Q 009176 341 WLYFFVYFSGATLGLVFLNNLGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPM 418 (541)
Q Consensus 341 wllf~~~~~g~g~Glm~I~n~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~ 418 (541)
|.+-+.-|+-..+-.+...-+.||+++++.++ +...||+.+..-.+|-..-..+.+ +++|...+...++++
T Consensus 16 ~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~-------r~~Rr~lLl~~l~lF 88 (394)
T COG2814 16 LALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTG-------RLERRRLLLGLLALF 88 (394)
T ss_pred HHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc-------ccchHHHHHHHHHHH
Confidence 34444444444566677889999999999864 557999999888887776544422 337778788888888
Q ss_pred HHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCC
Q 009176 419 AGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNA 497 (541)
Q Consensus 419 ~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~ 497 (541)
.++.++.+...+ ..+.++=++.|++-|..|++.-++++|+=..++-+.-=++++++..++-.++.++..++=|.-+
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G--- 165 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG--- 165 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh---
Confidence 999888888777 4577777999999999999999999999999999999999999999999999888888887765
Q ss_pred CCCccccccccHHHHHHHHHHHHHHHHHHHHHHh
Q 009176 498 HNGKCMGMACYRSTFILWGSFCLFGTFLALILYA 531 (541)
Q Consensus 498 ~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~ 531 (541)
+|.+|.+.++++++..+......-
T Consensus 166 ----------WR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 166 ----------WRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 899999999998887766655533
No 150
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.88 E-value=0.00011 Score=81.10 Aligned_cols=139 Identities=15% Similarity=0.133 Sum_probs=101.1
Q ss_pred HhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc--chhHHHHHHH
Q 009176 365 AESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN--VALYTSTAII 440 (541)
Q Consensus 365 ~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~--~~l~~~s~li 440 (541)
.+.+|.++ +...++......+..=+.+|+++|. .++|...+....+++.+++++.....+ ..++++-++.
T Consensus 42 ~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr------~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~ 115 (489)
T PRK10207 42 VKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDH------LLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTI 115 (489)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhh------ccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 34577653 4456666666666666678888552 126666666666667777666554433 3456777889
Q ss_pred HHhhhccchhhHHHhhhhcCCC--cccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHH
Q 009176 441 GVCSGAITSISVTTTTELFGTK--NFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSF 518 (541)
Q Consensus 441 G~~yG~~~~l~P~ivse~FG~k--~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~ 518 (541)
|++.|...+..+++++|.|..+ ..+.-|++.+++..+|+.+++.+.|++-|.. + |+..|++.+..
T Consensus 116 ~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~-g------------w~~~F~i~~i~ 182 (489)
T PRK10207 116 AVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF-G------------YSVTYNLCGAG 182 (489)
T ss_pred HhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh-C------------hHHHHHHHHHH
Confidence 9999999999999999999766 3466899999999999999999999997764 3 89999996553
Q ss_pred HHHH
Q 009176 519 CLFG 522 (541)
Q Consensus 519 ~~~g 522 (541)
.+++
T Consensus 183 ~~~~ 186 (489)
T PRK10207 183 LIIA 186 (489)
T ss_pred HHHH
Confidence 3333
No 151
>PRK12382 putative transporter; Provisional
Probab=97.86 E-value=0.00013 Score=76.95 Aligned_cols=154 Identities=12% Similarity=-0.030 Sum_probs=102.8
Q ss_pred hhhhchhHHHHHHHHHHhhcccceeecchHH-HHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhH
Q 009176 333 LMLQRVDFWLYFFVYFSGATLGLVFLNNLGQ-IAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPA 409 (541)
Q Consensus 333 q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~-i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~ 409 (541)
+...+.++|.+++..++..-..-+...-++. +.+++|.+ +....++...+...++++..|.+.|.. +|..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-------g~r~ 82 (392)
T PRK12382 10 RSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-------GAKR 82 (392)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-------cchH
Confidence 3445566777776665553322222233332 45677875 456789999999999999999884422 2222
Q ss_pred HHHHHHHHHHHH---HHHHhh-c----cc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHH
Q 009176 410 SIGALMAPMAGA---FMLLLN-E----TN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSF 480 (541)
Q Consensus 410 ~l~~~~~~~~~~---~ll~~~-~----~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~ 480 (541)
.+....+...++ +.+... . .+ ..+++.-.+.|++.+...+...+.+.|.+..|+.+...++..++...|..
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~ 162 (392)
T PRK12382 83 SALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALA 162 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHH
Confidence 232222222222 112111 1 12 34677778999999988888888999999999999999999999999999
Q ss_pred HHHHHHHHHhhhc
Q 009176 481 LFGYLAALVYHKE 493 (541)
Q Consensus 481 l~~~laG~iyD~~ 493 (541)
+++.+++.+++..
T Consensus 163 ~g~~~~~~l~~~~ 175 (392)
T PRK12382 163 AGAPLGLLLHSHF 175 (392)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999998753
No 152
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.84 E-value=0.00019 Score=76.39 Aligned_cols=107 Identities=18% Similarity=0.208 Sum_probs=82.3
Q ss_pred HHhCCChhhHHHHHHhhhhhc-ccchhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhcc
Q 009176 38 QLLSLSQLQLNNLAFASDAGK-LFGWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGN 116 (541)
Q Consensus 38 ~~l~~sq~~l~~l~~~~~~G~-~~G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~ 116 (541)
+.++-+++|+-.|=-.|-+-. .+-.+.|.+.||.|.++.+++|-...++-=. -.++-+ +||.+.+.=.+-|.
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTi--lFafg~-----sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTI--LFAFGN-----SYPMLFVARSLQGV 171 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHH--HHHHcc-----hhHHHHHHHHHhhh
Confidence 334445555666655566655 4488999999999999999999776665422 223333 56777778888999
Q ss_pred ccccccceeeeeecccCCCC--CceehhhHHHhhhhH
Q 009176 117 SICWINTVCYVVTIKNFPFD--RQVAVGITSSYLGLS 151 (541)
Q Consensus 117 g~~~~nTa~lvt~v~NFP~~--RG~a~gllk~~~GLS 151 (541)
|+.+++|+.+---++.||++ ||.|.|+..++.+|.
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG 208 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLG 208 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhcc
Confidence 99999999999999999984 799999999998875
No 153
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.83 E-value=0.00012 Score=75.90 Aligned_cols=144 Identities=17% Similarity=0.184 Sum_probs=103.3
Q ss_pred hHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Q 009176 361 LGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETNVALYTSTA 438 (541)
Q Consensus 361 ~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~l~~~s~ 438 (541)
+.++.+++|.+ +.....++..+...++.+..|.+.|.. +|...+....+..+++.+.....+...+++...
T Consensus 23 lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-------g~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (355)
T TIGR00896 23 LPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-------GEERSVAAGLLLIAAGILIRSAPGTALLFAGTA 95 (355)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-------CchHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 45667778875 456788888999999999988884432 333333333334444444332222245667778
Q ss_pred HHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHH
Q 009176 439 IIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSF 518 (541)
Q Consensus 439 liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~ 518 (541)
+.|+..|...+..|+++.|.| .|+-+...|+...+..+|..+++.+.+.+.|..+.+ +|..|.+.+.+
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~-----------w~~~f~~~~~~ 163 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDF-PQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGH-----------WQQALAWWALP 163 (355)
T ss_pred HHHHHHHHHhccchHHHHHhC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-----------HHHHHHHHHHH
Confidence 899999998999999999999 578899999999999999999988888887765432 78888888766
Q ss_pred HHHHH
Q 009176 519 CLFGT 523 (541)
Q Consensus 519 ~~~g~ 523 (541)
++++.
T Consensus 164 ~~~~~ 168 (355)
T TIGR00896 164 ALLAL 168 (355)
T ss_pred HHHHH
Confidence 55443
No 154
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.78 E-value=0.00014 Score=77.34 Aligned_cols=148 Identities=14% Similarity=0.008 Sum_probs=100.4
Q ss_pred hhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccc-hhhhcccCCCCChhHHHHHH
Q 009176 338 VDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPASIGAL 414 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~l~~~ 414 (541)
...|.....+.+..+.+ +..+-+.++.+++|.+ +....++...+...++.+.+|.+ |++ +|...+...
T Consensus 14 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~--------g~k~~l~~~ 84 (402)
T TIGR00897 14 NLLWGYIGVVVFMTGDG-LEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEII--------GPLKTMMIG 84 (402)
T ss_pred hhhHHHHHHHHHHHhhh-hHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc--------CcHHHHHHH
Confidence 33444444444444445 3334556677788875 56678899999999999999888 443 344444444
Q ss_pred HHHHHHHHHHH---hhc-cc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhH-HHHHHHHHH
Q 009176 415 MAPMAGAFMLL---LNE-TN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGS-FLFGYLAAL 488 (541)
Q Consensus 415 ~~~~~~~~ll~---~~~-~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs-~l~~~laG~ 488 (541)
.++.+++.++. ... .+ ..+++...+.|++++.......+.+.|.+..|+-+..-|+...+..+|. .+++.++|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~ 164 (402)
T TIGR00897 85 LLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSY 164 (402)
T ss_pred HHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44444443322 222 22 3456667778998888777777888899999999999999999999996 567888899
Q ss_pred HhhhcC
Q 009176 489 VYHKEG 494 (541)
Q Consensus 489 iyD~~~ 494 (541)
++|..+
T Consensus 165 l~~~~g 170 (402)
T TIGR00897 165 AIPAFG 170 (402)
T ss_pred cccccc
Confidence 987644
No 155
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.78 E-value=0.00026 Score=77.46 Aligned_cols=153 Identities=15% Similarity=0.122 Sum_probs=95.0
Q ss_pred hHHHHhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHH
Q 009176 361 LGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTST 437 (541)
Q Consensus 361 ~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s 437 (541)
+..+.+++|.+. .....+...+...+|.+.+|++.|.. +|.+.+....++.+++.++.+...+ ..+++.-
T Consensus 59 ~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-------G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r 131 (476)
T PLN00028 59 LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-------GPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVR 131 (476)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 345666778753 33455666667778889989885422 3444444455555555555555444 3455666
Q ss_pred HHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHH----HHHHHHHhhhcCCCCCCCccccccccHHHHH
Q 009176 438 AIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLF----GYLAALVYHKEGHNAHNGKCMGMACYRSTFI 513 (541)
Q Consensus 438 ~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~----~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~ 513 (541)
.+.|++.|... .....++|.|-.|+-|.-.|+......+|+.++ +.+...+.+... .+..=+|.+|+
T Consensus 132 ~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~--------~~~~gWr~~f~ 202 (476)
T PLN00028 132 FFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA--------PSFTAWRIAFF 202 (476)
T ss_pred HHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cchhhhHHHHH
Confidence 78898887643 455678999999999999888765444555444 444333333210 00001899999
Q ss_pred HHHHHHHHHHHHHHHH
Q 009176 514 LWGSFCLFGTFLALIL 529 (541)
Q Consensus 514 i~~~~~~~g~~lsl~l 529 (541)
+.++++++..++.+++
T Consensus 203 i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 203 VPGLLHIIMGILVLTL 218 (476)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999887766665544
No 156
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.76 E-value=0.00015 Score=79.51 Aligned_cols=126 Identities=15% Similarity=0.009 Sum_probs=98.5
Q ss_pred CccccccchHHHHHHhCCChhh-HHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009176 25 TNSNFPAYSSQLKQLLSLSQLQ-LNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHL 102 (541)
Q Consensus 25 t~Y~f~~ys~~lk~~l~~sq~~-l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~ 102 (541)
-.-..+.=.|.|++.+|+|.+| .+.|.-+...|-.+ -+++|++.||+|++.++.++.+...+-..+.-. .+
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f--a~----- 113 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL--GT----- 113 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH--HH-----
Confidence 3445566688999999999999 88999999988855 899999999999999999888766665544433 11
Q ss_pred hHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHH
Q 009176 103 SYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSA 158 (541)
Q Consensus 103 ~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i 158 (541)
+++.|.+.-++-|.+++... ++...-.+.||+ +||+++|+.-+..-++.++=..+
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L 169 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVL 169 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46888888888999998777 777777799998 79999998877665555443333
No 157
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.76 E-value=0.00023 Score=76.76 Aligned_cols=114 Identities=15% Similarity=0.097 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhh-hhhhhhhHHHHHHHH
Q 009176 409 ASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIV-VANIPIGSFLFGYLA 486 (541)
Q Consensus 409 ~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~-~~a~~~Gs~l~~~la 486 (541)
+.+.+..++|++=.+..+...+ ..+.+.=.+=|+-++...--.-=.+++.|..|-.++.|.+. .++..+|..+++.++
T Consensus 290 ~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~ 369 (412)
T PF01306_consen 290 NLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLA 369 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3344444455555555555554 45666667888888887777778899999999989999886 589999999999999
Q ss_pred HHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009176 487 ALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRK 535 (541)
Q Consensus 487 G~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~ 535 (541)
|++||+-+ |+.+|++++++.+..++++.++..+.||
T Consensus 370 G~lyd~~G-------------~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 370 GYLYDRIG-------------FQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HhhHhhcC-------------cHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 99999986 7999999999999899999888666655
No 158
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.75 E-value=0.00022 Score=78.52 Aligned_cols=165 Identities=12% Similarity=0.060 Sum_probs=108.7
Q ss_pred hhcccceeecc-hHHHHhhhcCCccc-chhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhh
Q 009176 350 GATLGLVFLNN-LGQIAESRGCSGTS-SLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLN 427 (541)
Q Consensus 350 g~g~Glm~I~n-~g~i~~slg~~~~~-~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~ 427 (541)
..|...+.++. +....+..|.+... -..++++.. ..+++++|.+.|...+.+++ .|+.++...++.++++...+++
T Consensus 23 ~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~gpl~Dr~~~~~~G-rrr~~ll~~~i~~~~~~~~~a~ 100 (491)
T PRK11010 23 ASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQA-YVFKFLWSPLMDRYTPPFLG-RRRGWLLATQLLLLVAIAAMGF 100 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCC-CchHHHHHHHHHHHHHHHHHHH
Confidence 33444444443 33333444554211 122333333 26788888884432222222 2334455555556555544443
Q ss_pred cc---c-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccc
Q 009176 428 ET---N-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCM 503 (541)
Q Consensus 428 ~~---~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~ 503 (541)
.. + ..+++...+.|++.+.+-....+++.|+|-.|+.+..-++...+..+|..+++.+.+.+.|....
T Consensus 101 ~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~G-------- 172 (491)
T PRK11010 101 LEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLG-------- 172 (491)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC--------
Confidence 32 2 24666778999999999999999999999999999999999999999999999899999884334
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHH
Q 009176 504 GMACYRSTFILWGSFCLFGTFLALI 528 (541)
Q Consensus 504 G~~CY~~tF~i~~~~~~~g~~lsl~ 528 (541)
+|..|++.+.++++..+..+.
T Consensus 173 ----Wr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 173 ----WQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHh
Confidence 899999999888777665554
No 159
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.75 E-value=0.0019 Score=71.28 Aligned_cols=93 Identities=17% Similarity=0.145 Sum_probs=78.2
Q ss_pred hhHHHHHHHHHhhhccchhhHHHhhhhcC--CCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccH
Q 009176 432 ALYTSTAIIGVCSGAITSISVTTTTELFG--TKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYR 509 (541)
Q Consensus 432 ~l~~~s~liG~~yG~~~~l~P~ivse~FG--~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~ 509 (541)
.+.+..+++|++|....++=-+++++.=- .++.|..-|+++.+..++-.+-....|.+.+..+++ -.
T Consensus 382 ~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~-----------~~ 450 (477)
T TIGR01301 382 SALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGG-----------NL 450 (477)
T ss_pred HHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCC-----------Ce
Confidence 46667889999999999999999999888 578999999999999998888887888866666653 47
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009176 510 STFILWGSFCLFGTFLALILYARTRK 535 (541)
Q Consensus 510 ~tF~i~~~~~~~g~~lsl~l~~r~r~ 535 (541)
.+|.+.++..+++.++++++.-|+|+
T Consensus 451 ~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 451 PAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred eHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 78888888899999999988777654
No 160
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.75 E-value=0.00085 Score=74.16 Aligned_cols=136 Identities=17% Similarity=0.103 Sum_probs=102.9
Q ss_pred hhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccc
Q 009176 45 LQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINT 123 (541)
Q Consensus 45 ~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nT 123 (541)
++...+....++|..+ .+++|.+.|++|++..++++.+...+|...+..+. .++.+.+.=++.|.|.+..+-
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~-------~~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP-------SWYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHhccchhhhhh
Confidence 4668999999999966 89999999999999999999999999999888776 457778888889999887664
Q ss_pred eeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCc--ccchhhhhchhhhHhHhhccce
Q 009176 124 VCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKR--AKLYLLFNSIFPLLACVVTSPV 192 (541)
Q Consensus 124 a~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d--~~~fLllla~~p~~v~l~~~~~ 192 (541)
.+-+-...-=|. .||..+++..-... -|-.+..+...+.+ ++ .=...+.++..|.++-.+++++
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~-~Gi~~~~~~~~~~~----~~~~~Wr~~~~~~~i~~~~~~~~~~~ 228 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFIT-IGILLGYCINYGTS----KVYAGWRIPLGLALIPAVILALGMLF 228 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHH-HHHHHHHHHhhhhc----cCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 433333333366 79999998888877 56666656565552 22 3446777777888777776444
No 161
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.67 E-value=0.00024 Score=75.30 Aligned_cols=148 Identities=13% Similarity=0.011 Sum_probs=104.2
Q ss_pred hHHHHhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHH
Q 009176 361 LGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTST 437 (541)
Q Consensus 361 ~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s 437 (541)
+.++.+++|.++ .....+.+.+...++.+..|++.|.. +|...+...+.....+.+......+ ..+.+.=
T Consensus 14 lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-------grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R 86 (368)
T TIGR00903 14 LSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-------FKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQ 86 (368)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 456777787753 45677788888889999999884432 3334333333333333322222223 4577777
Q ss_pred HHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHH
Q 009176 438 AIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGS 517 (541)
Q Consensus 438 ~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~ 517 (541)
.+.|++.|..... .+.++|.|-.|+-+...+++..+.++|..+++.+.+.+-+.. . +|..|++.+.
T Consensus 87 ~l~G~g~~~~~~~-~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-g------------Wr~~f~~~~~ 152 (368)
T TIGR00903 87 LLAALGQPFLLNA-FAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-G------------LQLLIIPIAA 152 (368)
T ss_pred HHHHhHhHHHHHH-HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-c------------hHHHHHHHHH
Confidence 8899998865433 444589999999999999999999999999998888887643 3 8999999988
Q ss_pred HHHHHHHHHHHH
Q 009176 518 FCLFGTFLALIL 529 (541)
Q Consensus 518 ~~~~g~~lsl~l 529 (541)
++++..++..+.
T Consensus 153 l~~~~~~~~~~~ 164 (368)
T TIGR00903 153 VAAAGIILVLAA 164 (368)
T ss_pred HHHHHHHHHHHH
Confidence 887776665544
No 162
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.66 E-value=0.00012 Score=80.15 Aligned_cols=165 Identities=16% Similarity=0.084 Sum_probs=92.3
Q ss_pred hcCCccccccchHHH-HHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHH-HHHHHHHHHhhhc
Q 009176 22 INGTNSNFPAYSSQL-KQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGL-IGYGLQYLFLTHT 98 (541)
Q Consensus 22 ~~Gt~Y~f~~ys~~l-k~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~-~GY~~~~l~~~~~ 98 (541)
.....|.+..|.|.. ++.+|++..+...+.....+|..+ .++.|.+.||+|++.++.+|++... .++........+
T Consensus 262 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~- 340 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSN- 340 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 345567777788874 567899988777666667777766 5678999999999998888886433 344333322221
Q ss_pred cccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhh
Q 009176 99 ISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLF 177 (541)
Q Consensus 99 i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLll 177 (541)
..+++.+..++.|.+.............+.||. .||++.|+.-...-+.|.+...+...+.. . .++. ....+
T Consensus 341 ----~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~-~-~~~~-~~~~~ 413 (490)
T PRK10642 341 ----VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVE-S-TQNL-MMPAY 413 (490)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH-H-hCCc-hHHHH
Confidence 223333333333322111111111122257988 59999998665544455555555544431 0 0111 11222
Q ss_pred hchhhhHhHhhccceee
Q 009176 178 NSIFPLLACVVTSPVVR 194 (541)
Q Consensus 178 la~~p~~v~l~~~~~ir 194 (541)
+...+.+++++..++++
T Consensus 414 ~~~~~~~i~~~~~~~~p 430 (490)
T PRK10642 414 YLMVVAVIGLITGVTMK 430 (490)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 33446666666666653
No 163
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.66 E-value=0.00022 Score=75.11 Aligned_cols=148 Identities=11% Similarity=-0.060 Sum_probs=107.5
Q ss_pred chhHHHHHHHHHHhhcccceee-cchHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHH
Q 009176 337 RVDFWLYFFVYFSGATLGLVFL-NNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGA 413 (541)
Q Consensus 337 ~~~Fwllf~~~~~g~g~Glm~I-~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~ 413 (541)
++++|++++..++. +.+...+ .-++++.+++|.+ +....++...+.+.++.+..|.+.|-. +|...+..
T Consensus 5 ~~~~~~~~~~~~~~-~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-------g~k~~~~~ 76 (381)
T PRK03633 5 TRPVLLLLCGLLLL-TLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-------GFNRSYYL 76 (381)
T ss_pred HHHHHHHHHHHHHH-HHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-------HHHHHHHH
Confidence 56788888777664 3444433 3567777788875 456788888888889999988874422 44444444
Q ss_pred HHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhh
Q 009176 414 LMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHK 492 (541)
Q Consensus 414 ~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~ 492 (541)
..++..++.+......+ ..+.+.-.+.|++.|..++...+.+.|..-.++-+...|....+..+|..+++.+.+.+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 77 ASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 44555555555444444 45667778999999988888888888888888889999999999999999999999888664
No 164
>TIGR00898 2A0119 cation transport protein.
Probab=97.65 E-value=0.00018 Score=78.48 Aligned_cols=143 Identities=13% Similarity=0.064 Sum_probs=106.6
Q ss_pred HHHhhhcCC-----cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHH
Q 009176 363 QIAESRGCS-----GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTS 436 (541)
Q Consensus 363 ~i~~slg~~-----~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~ 436 (541)
++.++.+.+ +.....++..+...+|.++.|.++|.. +|...+.+..++..++.++.++..+ ..+++.
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-------Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 186 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-------GRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVF 186 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-------cchHHHHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 344455543 245677788888888999988885532 4555555555556666555555545 457777
Q ss_pred HHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHH
Q 009176 437 TAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWG 516 (541)
Q Consensus 437 s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~ 516 (541)
-.+.|++.|+.+....++++|.++.|+-+..-++...+..+|..+++.+++.+.| +|..|++.+
T Consensus 187 r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----------------wr~~~~~~~ 250 (505)
T TIGR00898 187 RLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----------------WRWLQLAVS 250 (505)
T ss_pred HHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----------------HHHHHHHHH
Confidence 7899999999999999999999999999999999999999998888877765532 799999998
Q ss_pred HHHHHHHHHHHH
Q 009176 517 SFCLFGTFLALI 528 (541)
Q Consensus 517 ~~~~~g~~lsl~ 528 (541)
..+++..++.++
T Consensus 251 i~~~~~~~~~~~ 262 (505)
T TIGR00898 251 LPTFLFFLLSWF 262 (505)
T ss_pred HHHHHHHHHHHh
Confidence 887777666543
No 165
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.65 E-value=0.00028 Score=84.75 Aligned_cols=154 Identities=14% Similarity=0.057 Sum_probs=104.5
Q ss_pred HhhhhchhHHHHHHHHHHhhcccceeecchHHHH-hhhcCCcc----cchhhhhhhcccccccccccchhhhcccCCCCC
Q 009176 332 MLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIA-ESRGCSGT----SSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIP 406 (541)
Q Consensus 332 ~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~-~slg~~~~----~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~ 406 (541)
++.+++.+|+.++++.++..-...++..-+.... +..+.++. ++..+++.+...++.+.+|.+.|.. +
T Consensus 3 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-------g 75 (1146)
T PRK08633 3 KNLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-------S 75 (1146)
T ss_pred cchhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-------c
Confidence 4578889999999888776433332222222222 22333322 3455566666778888888884432 4
Q ss_pred hhHHHHHHHHHHHHHH---HHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHH
Q 009176 407 SPASIGALMAPMAGAF---MLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLF 482 (541)
Q Consensus 407 R~~~l~~~~~~~~~~~---ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~ 482 (541)
|...+....++.++.. .+.....+ ..+++.-++.|++.|...+...++++|++..++.+...|+..++..+|..++
T Consensus 76 rk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg 155 (1146)
T PRK08633 76 KNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAG 155 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHH
Confidence 5554443333222221 12222223 4577788899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh
Q 009176 483 GYLAALVYHK 492 (541)
Q Consensus 483 ~~laG~iyD~ 492 (541)
+.++|.+.+.
T Consensus 156 ~~l~~~l~~~ 165 (1146)
T PRK08633 156 TALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHh
Confidence 9999999876
No 166
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.62 E-value=0.00033 Score=72.51 Aligned_cols=146 Identities=12% Similarity=0.021 Sum_probs=94.7
Q ss_pred HHhhhcCC--cccchhhhhhhcccccccccccc-hhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHH
Q 009176 364 IAESRGCS--GTSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAI 439 (541)
Q Consensus 364 i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~l 439 (541)
+.+++|.+ +....+++..+...+.....|.+ |++. +|..++....+...++.++.+...+ ..+++...+
T Consensus 24 l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g-------~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 96 (375)
T TIGR00899 24 LSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQG-------DRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVL 96 (375)
T ss_pred HHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 34566765 34566777777777777777776 4431 2333333333333444444444444 335555667
Q ss_pred HHHhhhccchhhHHHhhhhcCCCccc--chhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHH
Q 009176 440 IGVCSGAITSISVTTTTELFGTKNFS--VNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGS 517 (541)
Q Consensus 440 iG~~yG~~~~l~P~ivse~FG~k~fg--~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~ 517 (541)
.|...+...+...+++.|....+.-+ ..++.+..+..+|..+++.+.|.+.|..+ ++..|++.+.
T Consensus 97 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~-------------~~~~f~~~~~ 163 (375)
T TIGR00899 97 LSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG-------------FTVMFLTAAL 163 (375)
T ss_pred HHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc-------------cHHHHHHHHH
Confidence 77777777777777778877544333 33678888888999999999999988643 7999999988
Q ss_pred HHHHHHHHHHHH
Q 009176 518 FCLFGTFLALIL 529 (541)
Q Consensus 518 ~~~~g~~lsl~l 529 (541)
++++..++.+..
T Consensus 164 ~~~~~~~~~~~~ 175 (375)
T TIGR00899 164 AFVLCGVLVWLF 175 (375)
T ss_pred HHHHHHHHHHHh
Confidence 777776665543
No 167
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.58 E-value=0.00018 Score=77.83 Aligned_cols=136 Identities=13% Similarity=0.134 Sum_probs=99.6
Q ss_pred cchhhhhhhcccccccccccc-hhhhcccCCCCChhHHHHHHHHHHHHHHHHHhh--ccc-chhHHHHHHHHHhhhccch
Q 009176 374 SSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPASIGALMAPMAGAFMLLLN--ETN-VALYTSTAIIGVCSGAITS 449 (541)
Q Consensus 374 ~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~--~~~-~~l~~~s~liG~~yG~~~~ 449 (541)
....+...+...++.+.+|.+ |++ +|.+.+....++..++.++... ..+ ..+++.-.+.|++.|..++
T Consensus 79 g~~~s~~~~~~~~~~~~~g~l~dr~--------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~ 150 (465)
T TIGR00894 79 GLILSSHFYGQIIIQIPVGYLAGKY--------VFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSP 150 (465)
T ss_pred hHHHHHHHHHHHHHHcchHHHHHHh--------CcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchh
Confidence 345556666677788888877 443 3334444444444444333322 222 3467777899999999999
Q ss_pred hhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 450 ISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 450 l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
..+.+++|+|..|+-+.-.|+...+..+|..+++.+.+.+.|.... ++..|++.+.++++..++.+.+
T Consensus 151 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~g------------w~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 151 ATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGG------------WPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC------------CCeehhhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986434 8999999988776665554444
No 168
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.56 E-value=0.00057 Score=72.42 Aligned_cols=171 Identities=8% Similarity=-0.029 Sum_probs=96.6
Q ss_pred hhHHHHHHHHHHhhcccce-eecchHH-HHhhhcCCcc--cchhhhhhhc-ccccccccccchhhhcccCCCCChhHHHH
Q 009176 338 VDFWLYFFVYFSGATLGLV-FLNNLGQ-IAESRGCSGT--SSLVSLSSSF-GFFGRLIPSLFGYFFSRSKHMIPSPASIG 412 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Glm-~I~n~g~-i~~slg~~~~--~~~Vsl~Si~-N~~GRl~~G~~s~~~~~~~~~~~R~~~l~ 412 (541)
..-|.+++..++. +.|.. ...-++. +.+++|.++. ...++...+. ..++.+.+|..||+. +|...+.
T Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g-------~r~~~~~ 86 (393)
T PRK15011 15 LTSTAFLIVAFLT-GIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRG-------DRKSLIV 86 (393)
T ss_pred chhHHHHHHHHHH-HHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------chhHHHH
Confidence 3345555554333 22222 2223333 3456777543 3344444443 334666677766653 3333333
Q ss_pred HHHHHHHHHHHHHhhcccc-hhHHHHHHHHHhhhccchhhHHHhhhhcCCCcc--cchhhhhhhhhhhhHHHHHHHHHHH
Q 009176 413 ALMAPMAGAFMLLLNETNV-ALYTSTAIIGVCSGAITSISVTTTTELFGTKNF--SVNHNIVVANIPIGSFLFGYLAALV 489 (541)
Q Consensus 413 ~~~~~~~~~~ll~~~~~~~-~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~f--g~nyg~~~~a~~~Gs~l~~~laG~i 489 (541)
...+...++..+.+...+. .+.+...+.|...+...+...+++.|....++- +..-++...+..+|..+++.++|.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l 166 (393)
T PRK15011 87 FCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYAL 166 (393)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 3333333444444444332 333333444555556666777777776654432 2233677888899999999999999
Q ss_pred hhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 490 YHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 490 yD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
.|.. + +|.+|++.+.++++..++....
T Consensus 167 ~~~~-g------------w~~~f~~~~~~~~~~~~~~~~~ 193 (393)
T PRK15011 167 AMGF-S------------FTVMYLSAAVAFIVCGVMVWLF 193 (393)
T ss_pred HHhc-C------------hHHHHHHHHHHHHHHHHHHHhh
Confidence 9864 3 7999999988887776655443
No 169
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.54 E-value=0.0005 Score=74.48 Aligned_cols=378 Identities=15% Similarity=0.090 Sum_probs=210.1
Q ss_pred hCCChhhHHHHHHhhhhhcccc-hhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhcccc
Q 009176 40 LSLSQLQLNNLAFASDAGKLFG-WISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSI 118 (541)
Q Consensus 40 l~~sq~~l~~l~~~~~~G~~~G-~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~ 118 (541)
=||+..-...+.-+.++|..+| ++-|.+.|++|++-+...--+...++=...-+...+..+.--.|-+|++=++.|.|.
T Consensus 79 g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGI 158 (538)
T KOG0252|consen 79 GHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGI 158 (538)
T ss_pred CcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccc
Confidence 3566667777888888998775 788999999998876544433333333222222222212123666888888888887
Q ss_pred ccccceeeeee---cccCC--CCCceehhhHHHhhh---hHHHHHHHHHHHHhcCCCCCcc---------cchhhhhchh
Q 009176 119 CWINTVCYVVT---IKNFP--FDRQVAVGITSSYLG---LSAKLYTSAVNAIETSSPNKRA---------KLYLLFNSIF 181 (541)
Q Consensus 119 ~~~nTa~lvt~---v~NFP--~~RG~a~gllk~~~G---LSaaift~i~~~~~~~~~~~d~---------~~fLllla~~ 181 (541)
+ +-+=.+ +..+- +.||+-.+...++.| |.|++.|.+-.+.|- +.-+++ =...+.++.+
T Consensus 159 G----GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe-~~~~~~~~~~~ld~vWRl~~glg~v 233 (538)
T KOG0252|consen 159 G----GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFE-KIFNGPSTYPHLDGVWRIIFGLGAV 233 (538)
T ss_pred c----CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHh-ccCCCCCCchHHHHHHHHHHHHHHH
Confidence 7 322221 23332 469999888888877 678888887777652 111111 1356777777
Q ss_pred hhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhhhccc
Q 009176 182 PLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLLAPLV 261 (541)
Q Consensus 182 p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~~Pl~ 261 (541)
|+++++.. |..=|....|+ ...+ .+
T Consensus 234 pa~~~ly~----Rl~M~Et~~Y~-------------------------al~~--~~------------------------ 258 (538)
T KOG0252|consen 234 PALLVLYF----RLKMPETARYT-------------------------ALVS--KK------------------------ 258 (538)
T ss_pred HHHHHHHh----hhcCCcchhHH-------------------------HHhh--cC------------------------
Confidence 77655431 11101111000 0000 00
Q ss_pred cccccchhhhhhhhhhhhcccccCCCCcccccccccccCcC-CccccccccCCCCCCCccCCCCccccC--CHHhhhhch
Q 009176 262 IPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVA-TKEEVDHQLRDDDSDGIYHGLGAKEEI--GAMLMLQRV 338 (541)
Q Consensus 262 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~--t~~q~l~~~ 338 (541)
.+ +.. + +.++....++++++. +++.+ .+.+... .-..++. ..+.++-+.
T Consensus 259 ------~~------~a~------~--d~~k~~~~~~~~~~~~~~~~~----~~~~~~~----~F~~~f~~~hg~~Llgt~ 310 (538)
T KOG0252|consen 259 ------LK------QAA------G--DMKKVLSVDIEAESTAESDVP----PPSNSFG----LFSRLFLRWHGKHLLGTA 310 (538)
T ss_pred ------Hh------hhh------h--ccccccccccchhhccccCCC----Ccccccc----hHHHHHHHHHHHHHHHHH
Confidence 00 000 0 000000000100000 00000 0000000 0001112 336677777
Q ss_pred hHHHHHHHHHHhhcccceeecchHHHHhhhcCC-cc---------cchhhhhhhcccc-cccccccchhhhcccCCCCCh
Q 009176 339 DFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS-GT---------SSLVSLSSSFGFF-GRLIPSLFGYFFSRSKHMIPS 407 (541)
Q Consensus 339 ~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~-~~---------~~~Vsl~Si~N~~-GRl~~G~~s~~~~~~~~~~~R 407 (541)
-=|.++=+-+-+.+. |.+.|-+++|.. .+ +..--++..+..+ |-.++.++.|.+ +|
T Consensus 311 ~~WFllDiafy~~nL------~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-------GR 377 (538)
T KOG0252|consen 311 GTWFLLDIAFYGQNL------FQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-------GR 377 (538)
T ss_pred HHHHhhhhhhhcccc------HHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-------hh
Confidence 777776665555443 667777877762 21 2223356667776 777877775543 78
Q ss_pred hHHHHHHHHHHHHHHHHHhhccc-----chhHHHHHHHH--HhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHH
Q 009176 408 PASIGALMAPMAGAFMLLLNETN-----VALYTSTAIIG--VCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSF 480 (541)
Q Consensus 408 ~~~l~~~~~~~~~~~ll~~~~~~-----~~l~~~s~liG--~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~ 480 (541)
.++...-+.+|.+.++.++.+-+ ..+.+.-.+.. ..+|=. +..-.+-+|.|-.+-=|+-||+-...-=.|+.
T Consensus 378 k~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn-~ttfivpaE~FParvR~t~hGIsAA~GK~GAi 456 (538)
T KOG0252|consen 378 KYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPN-ATTFIVPAEIFPARVRSTCHGISAASGKAGAI 456 (538)
T ss_pred HHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCC-ceeEEeehhhchHHHhhhhhhHHHHhccchHH
Confidence 88887777778777777664433 12222112222 234432 22334557999999999999998877778888
Q ss_pred HHHHHHHHHhhhc---CCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 481 LFGYLAALVYHKE---GHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 481 l~~~laG~iyD~~---~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
++...++++-|++ ..+ ++.+|++.++++.+|.+..+.+-
T Consensus 457 vg~~~F~~~t~~~yp~~~g-----------~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 457 VGAFGFLYLTDHNYPPNIG-----------VRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred HHHHHhhHhhhccCCcccc-----------chHHHHHHHHHHHHhHheeEEee
Confidence 8876666665533 111 79999999999999999988875
No 170
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.53 E-value=0.00077 Score=72.77 Aligned_cols=145 Identities=11% Similarity=-0.014 Sum_probs=99.5
Q ss_pred ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhc---------cc----chhHHHHHH
Q 009176 373 TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNE---------TN----VALYTSTAI 439 (541)
Q Consensus 373 ~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~---------~~----~~l~~~s~l 439 (541)
....+++..+...+|-+++|.+.|.. +|...+.+..+++.++.++.+.. .+ ..+.+.-++
T Consensus 57 ~~~~~s~~~ig~~~~~~~~G~l~dr~-------Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 57 LGFCVASALIGCIIGGALGGYCSNRF-------GRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 45678888888889999999885532 55555555555555554443321 11 235667789
Q ss_pred HHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHH
Q 009176 440 IGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFC 519 (541)
Q Consensus 440 iG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~ 519 (541)
.|++.|+.++..+++++|.+..|+-|...++...+..+|..+.+.+.+.+.+..... .. +..=+|..|.+.+...
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~----~~-~~~gWr~~f~~~~~~~ 204 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDAS----WL-NTDGWRYMFASEAIPA 204 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCccc----cc-ccCChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999888765554443221100 00 0011899999887777
Q ss_pred HHHHHHHHHH
Q 009176 520 LFGTFLALIL 529 (541)
Q Consensus 520 ~~g~~lsl~l 529 (541)
++..++.+++
T Consensus 205 ~~~~~~~~~l 214 (479)
T PRK10077 205 LLFLMLLYFV 214 (479)
T ss_pred HHHHHHHHcC
Confidence 6665544433
No 171
>PTZ00207 hypothetical protein; Provisional
Probab=97.52 E-value=0.00049 Score=77.65 Aligned_cols=167 Identities=16% Similarity=0.167 Sum_probs=112.3
Q ss_pred HHHHHHHHHHhhcccceeecch--HHHHhhhcCCcc--cchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHH
Q 009176 340 FWLYFFVYFSGATLGLVFLNNL--GQIAESRGCSGT--SSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALM 415 (541)
Q Consensus 340 Fwllf~~~~~g~g~Glm~I~n~--g~i~~slg~~~~--~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~ 415 (541)
+|.+...+.+...+|.++.-++ +++.+++|+++. +...++ ...-..+-+.+|++.|.. +|...+.+..
T Consensus 27 w~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~-------G~R~vllig~ 98 (591)
T PTZ00207 27 FALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTV-GIAVGYFLLPYSFIYDYL-------GPRPIFVLSM 98 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHh-------CcHHHHHHHH
Confidence 5566666666666777766555 667777888643 222222 111122344577774432 5556666666
Q ss_pred HHHHHHHHHHhhc------cc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHH
Q 009176 416 APMAGAFMLLLNE------TN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAAL 488 (541)
Q Consensus 416 ~~~~~~~ll~~~~------~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~ 488 (541)
++..++.++.+.. .+ ..+++.-++.|++-|..+.....++.++| +++-|.-.|++..+.++|+.+++.+...
T Consensus 99 ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gLGsaI~~~l~~~ 177 (591)
T PTZ00207 99 TVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGLGSAILGSIQLA 177 (591)
T ss_pred HHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677776666553 23 34666777889888888888889999999 5788999999999999999988666665
Q ss_pred HhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 489 VYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 489 iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
+++. + ++..|++.+.+.++..++.+.+
T Consensus 178 l~~~--~------------~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 178 FFSD--N------------TSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHH--h------------HHHHHHHHHHHHHHHHHHHHhh
Confidence 6541 2 5778888888777666655554
No 172
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.52 E-value=0.00067 Score=74.47 Aligned_cols=183 Identities=13% Similarity=0.085 Sum_probs=115.0
Q ss_pred hchhHHHHHHHHHHhhcccceeecc-hHHHHh-hhcCC--cccchhhhhhhcccccccccccc-hhhhcccCCCCChhHH
Q 009176 336 QRVDFWLYFFVYFSGATLGLVFLNN-LGQIAE-SRGCS--GTSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPAS 410 (541)
Q Consensus 336 ~~~~Fwllf~~~~~g~g~Glm~I~n-~g~i~~-slg~~--~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~ 410 (541)
-++.+|+-++.+.++-..= +..+- ..++.+ +++.+ +....+++..+...++|+..|.+ |++. +|.+.
T Consensus 32 a~r~l~~s~~~f~~~F~~w-~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G-------~R~v~ 103 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVW-MLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFG-------GRRWT 103 (462)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------ChHHH
Confidence 3457788777766653221 12221 233333 56665 46678888888899999998888 6553 55554
Q ss_pred HHHHHHHHHHHHHHHhhc-----cc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhh----hhhhhhhHH
Q 009176 411 IGALMAPMAGAFMLLLNE-----TN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIV----VANIPIGSF 480 (541)
Q Consensus 411 l~~~~~~~~~~~ll~~~~-----~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~----~~a~~~Gs~ 480 (541)
... .++.++..++.... .+ ..+++.-.+.|++ |+.|+.....++++|-.|+.|+..|+. .++..++.+
T Consensus 104 ~~~-~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~ 181 (462)
T PRK15034 104 VFS-TAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQL 181 (462)
T ss_pred HHH-HHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHH
Confidence 433 33334444444432 23 4577888899998 889999999999999999999999998 455666666
Q ss_pred HHHHHH-HHHhhhcCCCCCCCccc-cccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 481 LFGYLA-ALVYHKEGHNAHNGKCM-GMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 481 l~~~la-G~iyD~~~~~~~~~~C~-G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
+.|.+. ..+++.-+.+... .=. +..=.+.++++...+.++..++.+++
T Consensus 182 l~p~~i~~~l~~~~G~~~~~-~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 182 VAPLVIFVPVFAFLGVNGVP-QADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHHHHHHHHHhcccccc-ccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 665544 3355443321000 000 12226777778888777777776655
No 173
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.48 E-value=0.0005 Score=82.94 Aligned_cols=178 Identities=15% Similarity=0.127 Sum_probs=109.2
Q ss_pred HhhhhchhHHHHHHHHHHhhcccceeecchHHHH-hhhcCC---cccchhhhhh----hcccccccccccchhhhcccCC
Q 009176 332 MLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIA-ESRGCS---GTSSLVSLSS----SFGFFGRLIPSLFGYFFSRSKH 403 (541)
Q Consensus 332 ~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~-~slg~~---~~~~~Vsl~S----i~N~~GRl~~G~~s~~~~~~~~ 403 (541)
++++++.+|+.+|+..+++...--+.-..+..+. ..+..+ ....++++.. +...+.-.++|.+.|-.
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~----- 79 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY----- 79 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-----
Confidence 4578899999999888776532111111111111 111111 1113344433 33444555667774322
Q ss_pred CCChhHHHH----HHHHHHHHHHHHHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhH
Q 009176 404 MIPSPASIG----ALMAPMAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGS 479 (541)
Q Consensus 404 ~~~R~~~l~----~~~~~~~~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs 479 (541)
+|...+. +..+....+.+.....+...+++..++.|++.+..++..-+++.|++..+..+...+++.++..+|.
T Consensus 80 --~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~ 157 (1140)
T PRK06814 80 --DKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAI 157 (1140)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHH
Confidence 3433321 1111111112212222224688899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 480 FLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 480 ~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
.+++.++|.+.+..+ ++..|.+.+...+++.++.+.+
T Consensus 158 ~igp~l~g~l~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~ 194 (1140)
T PRK06814 158 LLGTIIGGLATISGN-------------FVILVALLMGIAVLGWLASLFI 194 (1140)
T ss_pred HHHHHHHHHHHhccc-------------cHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999998643 6888855444444444444433
No 174
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.44 E-value=0.001 Score=70.13 Aligned_cols=139 Identities=14% Similarity=0.035 Sum_probs=96.1
Q ss_pred HHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHH---hhcc-----c-ch
Q 009176 364 IAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLL---LNET-----N-VA 432 (541)
Q Consensus 364 i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~---~~~~-----~-~~ 432 (541)
+.+++|.+ +.....++..+...++.+..|.+.|.. +|...+....++.+++.+.. .... + ..
T Consensus 42 i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (399)
T PRK05122 42 VHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-------GPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLL 114 (399)
T ss_pred HHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-------CCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHH
Confidence 55677765 446677888888888888888884422 33333333333333322211 1111 1 13
Q ss_pred hHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHH
Q 009176 433 LYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTF 512 (541)
Q Consensus 433 l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF 512 (541)
+++.-.+.|++.|.......+.+.|.+..|+.+..-++...+..+|..+++.+++.+.+..+ ++..|
T Consensus 115 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-------------~~~~~ 181 (399)
T PRK05122 115 LLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGG-------------LAGLG 181 (399)
T ss_pred HHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHccc-------------HHHHH
Confidence 66677899999999999999999999999999999999888888888888999999987532 67777
Q ss_pred HHHHHHHHHH
Q 009176 513 ILWGSFCLFG 522 (541)
Q Consensus 513 ~i~~~~~~~g 522 (541)
.+...++++.
T Consensus 182 ~~~~~~~~~~ 191 (399)
T PRK05122 182 LLIMLLALLG 191 (399)
T ss_pred HHHHHHHHHH
Confidence 7765554433
No 175
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.44 E-value=0.0099 Score=64.03 Aligned_cols=169 Identities=19% Similarity=0.244 Sum_probs=120.9
Q ss_pred HHHHHHHHHHhhcccceeecchHHH-Hh-hhcCCccc--chhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHH
Q 009176 340 FWLYFFVYFSGATLGLVFLNNLGQI-AE-SRGCSGTS--SLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALM 415 (541)
Q Consensus 340 Fwllf~~~~~g~g~Glm~I~n~g~i-~~-slg~~~~~--~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~ 415 (541)
|..-++.+-.|.. .+..++-+ +. .+|.++.. ++--..++.-.+|-++.|++||.+ + +|+..+....
T Consensus 257 FLiA~~~~~DGv~----til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf---g---~k~vl~~~lv 326 (438)
T COG2270 257 FLIARFFYIDGVN----TILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF---G---SKPVLMIGLV 326 (438)
T ss_pred HHHHHHHHHhhHH----HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---C---CceeehHHHH
Confidence 4444444544432 33333332 33 45665433 344455666778999999998754 1 4445444444
Q ss_pred HHHHHHHHHHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCC
Q 009176 416 APMAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGH 495 (541)
Q Consensus 416 ~~~~~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~ 495 (541)
+.+..++..+....+..+++...++|++.|+..+..=+.-+++.-.++-+.-||+-.+.--.+++++|.+.|.+-|.+++
T Consensus 327 i~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~ 406 (438)
T COG2270 327 ILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS 406 (438)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 44444444443333466888899999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 496 NAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 496 ~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
-|..+.....+..+|.++-+.+.
T Consensus 407 ------------~r~g~~~i~vll~iGl~~L~~v~ 429 (438)
T COG2270 407 ------------SRAGVLSIIVLLLIGLLLLLRVK 429 (438)
T ss_pred ------------hhhHHHHHHHHHHhhHhhEEeec
Confidence 68888888888878776655443
No 176
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.41 E-value=0.00018 Score=81.95 Aligned_cols=160 Identities=16% Similarity=0.128 Sum_probs=110.6
Q ss_pred chHHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcc--------
Q 009176 360 NLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNET-------- 429 (541)
Q Consensus 360 n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~-------- 429 (541)
-+.+|-+.++.+ +....+|...+.+.++-+..|++.|.. +|+.++.+..++++++.++.+.++
T Consensus 55 ~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-------~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~ 127 (633)
T TIGR00805 55 SLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-------HRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSY 127 (633)
T ss_pred hchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-------CcceEEEecHHHHHHHHHHHhChHHhcCCccc
Confidence 344555667764 456788888999999888887773321 444555555555666655544331
Q ss_pred -------------------------------------------c-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCccc
Q 009176 430 -------------------------------------------N-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFS 465 (541)
Q Consensus 430 -------------------------------------------~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg 465 (541)
. ..++++-.+.|++-|..+++.++++.|.+..|+-+
T Consensus 128 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~ 207 (633)
T TIGR00805 128 STTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSP 207 (633)
T ss_pred cccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccH
Confidence 1 12556788999999999999999999999999999
Q ss_pred chhhhhhhhhhhhHHHHHHHHHHHhhhcC----CCCCC-----CccccccccHHHHHHHHHHHHHHHHHH
Q 009176 466 VNHNIVVANIPIGSFLFGYLAALVYHKEG----HNAHN-----GKCMGMACYRSTFILWGSFCLFGTFLA 526 (541)
Q Consensus 466 ~nyg~~~~a~~~Gs~l~~~laG~iyD~~~----~~~~~-----~~C~G~~CY~~tF~i~~~~~~~g~~ls 526 (541)
...+++..+..+|..+++.++|.+.+... ...++ ..=.-...++..|++.+.+.++..+..
T Consensus 208 ~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l 277 (633)
T TIGR00805 208 LYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPF 277 (633)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888888764321 10000 000111247888999988877766543
No 177
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.41 E-value=0.0062 Score=68.79 Aligned_cols=129 Identities=15% Similarity=0.031 Sum_probs=78.5
Q ss_pred chhHHHHHHHHHHHHhcC--CccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHH
Q 009176 7 ILQWLSLVGAIWLQSING--TNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTL 83 (541)
Q Consensus 7 ~~rw~~l~as~~v~~~~G--t~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~ 83 (541)
..|.+..++++.+..++. ..+..+.-=+++-..+|=+ .+...+.++..++..+ -.+.|-+.|.+|+|-++++|.++
T Consensus 39 s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l 117 (599)
T PF06609_consen 39 SPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLL 117 (599)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHH
Confidence 455666665555544433 2333333345677777765 5666778888888855 78899999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhH
Q 009176 84 GLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGIT 144 (541)
Q Consensus 84 ~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gll 144 (541)
..+|..+..-+ . ..-.++..+.+.|.|.+...-..+. --.--|+ +|+...++.
T Consensus 118 ~vvG~Iv~atA-----~--~~~~~iag~~l~GvgaG~~~~~~~~-isEl~p~k~R~~~~~~~ 171 (599)
T PF06609_consen 118 GVVGSIVCATA-----Q--NMNTFIAGMVLYGVGAGVQELAALA-ISELVPNKWRGLGLAIA 171 (599)
T ss_pred HHhHHHHhhcC-----C--cHHHHHHHHHHHHHhhHHHHHHHHH-HHHhcccchhhhHhHHH
Confidence 99998664321 1 2234455566666554322211111 1133354 676655544
No 178
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.36 E-value=0.0025 Score=67.60 Aligned_cols=405 Identities=13% Similarity=0.077 Sum_probs=209.0
Q ss_pred hcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHH-HHHHHHHHHhhhcc
Q 009176 22 INGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGL-IGYGLQYLFLTHTI 99 (541)
Q Consensus 22 ~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~-~GY~~~~l~~~~~i 99 (541)
-++-.-.-|..+|.+.+.-+.+..|...|...-+.|+-+ ....|+++|+.|.|...-+-....+ .|| .++
T Consensus 90 d~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~------is~-- 161 (528)
T KOG0253|consen 90 DAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGV------ISG-- 161 (528)
T ss_pred HHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHH------hhc--
Confidence 333333446789999999999999999999999999977 7899999999998765433222221 222 233
Q ss_pred ccchHHHHHHHHHHhccccccccceeeeeecccC-CC-CCceehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhh
Q 009176 100 SHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNF-PF-DRQVAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLF 177 (541)
Q Consensus 100 ~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NF-P~-~RG~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLll 177 (541)
.+|.+..+|++=.+.|.|-+- . -...+---.| |. ||++-+=.. .+.-....+=-.+.-..-+ +-.-.++++
T Consensus 162 ~spnf~~L~~f~~l~~~g~gg-~-pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~----~~gwr~~l~ 234 (528)
T KOG0253|consen 162 ASPNFASLCVFRALWGFGVGG-L-PVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS----NFGWRYLLF 234 (528)
T ss_pred CCCCeehhhHHHHHHhccCCC-c-cHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH----hhhHHHHHH
Confidence 245555677776777766652 0 1111111333 55 677665544 5554444333333332221 224457777
Q ss_pred hchhhhHhHhhccceeeeecCCCcccccccccccCCcchhhhHHHHHHHHHHHHhhcccccccCCCCchhHHHHHHHHhh
Q 009176 178 NSIFPLLACVVTSPVVREIGDHVQESSSSSRRRTRGGFVFMFFVTIVTGCYAVLGSLDLSKLKTLLPPVKNLIGIVICLL 257 (541)
Q Consensus 178 la~~p~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~yl~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 257 (541)
+.-.|.....++.+- . +.++.+.....++++. ++..- -+... +. . -
T Consensus 235 ~~~~pl~~~a~f~~w---~-~ESpRf~~~~G~~~kA-----------letL~---kiArm-Ng--~-------------q 280 (528)
T KOG0253|consen 235 TSSTPLMFAARFLVW---V-YESPRFYLAKGDDYKA-----------LETLH---KIARM-NG--K-------------Q 280 (528)
T ss_pred HHHhHHHHHHHHHhh---c-ccCcchhhhcCChHHH-----------HHHHH---HHHHh-cC--C-------------C
Confidence 777776554443322 2 2111110001111110 00000 00000 00 0 0
Q ss_pred hccccccccchhhhhhhhhhhhcccccCCCCcccccccccccCcCCccccccccCCCCCCCccCCCCccccCCHHhhhhc
Q 009176 258 APLVIPLGEKIRCFVEDKRLINRVKRVHNSTSIEEVSSRLENGVATKEEVDHQLRDDDSDGIYHGLGAKEEIGAMLMLQR 337 (541)
Q Consensus 258 ~Pl~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~q~l~~ 337 (541)
.|+.+... +..++.|+|+ ++.+. ...++.++.+-....-++++-+-++
T Consensus 281 lplgvl~~---------------------------s~~~~~e~e~-~~~~~----~~~~a~ke~rg~~~nLlsp~lrktt 328 (528)
T KOG0253|consen 281 LPLGVLES---------------------------SAIDRQEQEE-SDLDD----SKSSAAKEVRGGTTNLLSPKLRKTT 328 (528)
T ss_pred CCcceeee---------------------------ehhhhhhhhh-hchhh----hhhccccccccchHhhcChHHHHHH
Confidence 11111100 0000111000 00000 0000000000000122444555556
Q ss_pred hhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--------c----------cc-chhhhhhhcccccccccccc-hhh
Q 009176 338 VDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--------G----------TS-SLVSLSSSFGFFGRLIPSLF-GYF 397 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--------~----------~~-~~Vsl~Si~N~~GRl~~G~~-s~~ 397 (541)
..-|.+|+.-.+..=.-...+-.+-|++.+.+.+ + .. .=+=+.|..-|-|-++.+++ |++
T Consensus 329 lllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverl 408 (528)
T KOG0253|consen 329 LLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERL 408 (528)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHh
Confidence 6667666655443211112223344444432211 0 00 12234566788899998877 543
Q ss_pred hcccCCCCChhHHHHHHHHHHHHHHHHHhhcc--c---chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhh
Q 009176 398 FSRSKHMIPSPASIGALMAPMAGAFMLLLNET--N---VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVV 472 (541)
Q Consensus 398 ~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~--~---~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~ 472 (541)
+|...|+..++++++..+++.... + ..++.+.+.+-.+|+. .-..+-|.|-++-=++--|.-.
T Consensus 409 --------GRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqv----aYvYtPEVyPTavRatgvGtcS 476 (528)
T KOG0253|consen 409 --------GRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQV----AYVYTPEVYPTAVRATGVGTCS 476 (528)
T ss_pred --------cchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheE----EEEecCcccchhhhhcchhhhh
Confidence 788888888888887655554332 2 2355555555555554 4456668888888888888888
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009176 473 ANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTR 534 (541)
Q Consensus 473 ~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r 534 (541)
-..-+|+++-|.+| +. .|.+ -..+-.+-+++|+++.+++.++-..||
T Consensus 477 smaRIggI~~p~iA--~~-~e~s------------~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 477 SMARIGGIFSPVIA--MR-AELS------------TSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred hHHhhhhhhhhHHH--HH-hccc------------eeehHHHHHHHHHHHHHHheeeeeccC
Confidence 88889999999888 32 2333 355667777888888888877755554
No 179
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.31 E-value=0.0021 Score=66.71 Aligned_cols=160 Identities=15% Similarity=0.063 Sum_probs=103.4
Q ss_pred hHHHHhhhcCCcccc-hhhhhhhcccccccccccc-hhhhcccCCCCChhH-HHHHHHHHHHHHHHHHhhccc----chh
Q 009176 361 LGQIAESRGCSGTSS-LVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPA-SIGALMAPMAGAFMLLLNETN----VAL 433 (541)
Q Consensus 361 ~g~i~~slg~~~~~~-~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~-~l~~~~~~~~~~~ll~~~~~~----~~l 433 (541)
+..+.++.|.+.... ..+...+-.. .+++.|.+ |++..|+ .+|.. ++....++++++.+++.+..+ ..+
T Consensus 11 ~~~~~~~~g~s~~~~g~~~~~~~~~~-~~~~~g~~~Dr~~~~~---~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l 86 (356)
T TIGR00901 11 LPYWLRSKNVSLKTIGFFSLVGLPYS-LKFLWSPLVDTVYLPF---FGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLL 86 (356)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCC---CCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHH
Confidence 344566777764321 2222222222 27777777 6553221 23333 334445555555444443322 235
Q ss_pred HHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHH
Q 009176 434 YTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFI 513 (541)
Q Consensus 434 ~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~ 513 (541)
+....+.+++.+.+....-+++.|.+..|+-+..-|+...+..+|..+++.+++.+++..+.. + .....+|..|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~--~---~~~~~wr~~f~ 161 (356)
T TIGR00901 87 AGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFAN--T---GLITLWGYIFF 161 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--c---ccccccHHHHH
Confidence 555567788888888889999999999999999999999999999999999999998765521 1 13456899999
Q ss_pred HHHHHHHHHHHHHHHH
Q 009176 514 LWGSFCLFGTFLALIL 529 (541)
Q Consensus 514 i~~~~~~~g~~lsl~l 529 (541)
+.+...+++.++.++.
T Consensus 162 i~ai~~l~~~~~~~~~ 177 (356)
T TIGR00901 162 WTALLILPGLLVTLFL 177 (356)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9988777766555543
No 180
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.27 E-value=0.0027 Score=66.90 Aligned_cols=161 Identities=12% Similarity=0.076 Sum_probs=98.8
Q ss_pred hhHHHH--HHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccc-hhhhcccCCCCChhHHHH
Q 009176 338 VDFWLY--FFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPASIG 412 (541)
Q Consensus 338 ~~Fwll--f~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~l~ 412 (541)
+..|.- |+.++++.|. ++.-++...+++|.+ +....+++.++...++.+..|.+ |++. |++ .-+.....
T Consensus 5 ~~~~~~~~~~~~~~~~g~---~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g-~~~--~~~~~~~~ 78 (382)
T PRK11128 5 PTRWLALSYFGYFFAYGV---FLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPS-QLI--PALRLLAL 78 (382)
T ss_pred ccHHHHHHHHHHHHHHHH---HhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhc-chH--HHHHHHHH
Confidence 444544 5555544332 233445666777765 45567777777777777776665 4442 100 00112111
Q ss_pred HHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhh
Q 009176 413 ALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYH 491 (541)
Q Consensus 413 ~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD 491 (541)
..... ........++ ..+++.-.+.|++.++.++...+++.|. .|+.+..+|.......+|..++|.++|.++|
T Consensus 79 -~~~~~--~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~ 153 (382)
T PRK11128 79 -LTLLF--AVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVS 153 (382)
T ss_pred -HHHHH--HHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 1112222233 2355666778999998988888887776 5677888999998889999999999999999
Q ss_pred hcCCCCCCCccccccccHHHHHHHHHHHHHH
Q 009176 492 KEGHNAHNGKCMGMACYRSTFILWGSFCLFG 522 (541)
Q Consensus 492 ~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g 522 (541)
..+ +|..|++.+...++.
T Consensus 154 ~~g-------------~~~~f~~~~~~~~~~ 171 (382)
T PRK11128 154 WFG-------------EQAILWILTAGVASM 171 (382)
T ss_pred HcC-------------hhHHHHHHHHHHHHH
Confidence 764 688998777544433
No 181
>PRK11462 putative transporter; Provisional
Probab=97.23 E-value=0.012 Score=64.32 Aligned_cols=106 Identities=13% Similarity=-0.005 Sum_probs=65.6
Q ss_pred HHhCCChhhHHHHHHhhhhhccc-chhhhhhcccc----c-hHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHH
Q 009176 38 QLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYL----P-LWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLT 111 (541)
Q Consensus 38 ~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~----p-p~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~ 111 (541)
+.+|++.....++-...-+=..+ -++.|.++|+. | .|.-+++|++...+.+.++|..=...-.....|....++
T Consensus 38 ~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~ 117 (460)
T PRK11462 38 DIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYT 117 (460)
T ss_pred HhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHH
Confidence 57788888877776666655555 78889999975 3 234567899888888888885421100111245555544
Q ss_pred HHhccccccccc--eeeeeecccCCCCCceehhhH
Q 009176 112 VLAGNSICWINT--VCYVVTIKNFPFDRQVAVGIT 144 (541)
Q Consensus 112 ~l~g~g~~~~nT--a~lvt~v~NFP~~RG~a~gll 144 (541)
+. ..+-+..|+ .++.+.+-+=|++|.++.+.-
T Consensus 118 ~~-~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r 151 (460)
T PRK11462 118 LL-TLLYTVVNIPYCALGGVITNDPTQRISLQSWR 151 (460)
T ss_pred HH-HHHHHHHhccHHHHHHHhcCCHHHHHHHHHHH
Confidence 33 333333333 356666655588898877743
No 182
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.22 E-value=0.0015 Score=71.86 Aligned_cols=145 Identities=17% Similarity=0.081 Sum_probs=97.3
Q ss_pred cchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-------chhHHHHHHHHHhhhc
Q 009176 374 SSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-------VALYTSTAIIGVCSGA 446 (541)
Q Consensus 374 ~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-------~~l~~~s~liG~~yG~ 446 (541)
....+...+...+|.+..|.+.|.. +|...+....+++.++.++.+...+ ..+++.-.+.|++.|+
T Consensus 59 ~~~~~~~~ig~~ig~~~~g~l~d~~-------Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~ 131 (502)
T TIGR00887 59 AAVNGSASIGTLAGQLFFGWLADKL-------GRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGG 131 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-------ccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhh
Confidence 4567777788888888888884432 5666555555555555444333221 2466777899999999
Q ss_pred cchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCC----CCCCCccccc------cccHHHHHHHH
Q 009176 447 ITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGH----NAHNGKCMGM------ACYRSTFILWG 516 (541)
Q Consensus 447 ~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~----~~~~~~C~G~------~CY~~tF~i~~ 516 (541)
.++..|++++|.|..|+-|...++......+|..+++.++..+...... ..+...|.+. .=+|..|.+.+
T Consensus 132 ~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ 211 (502)
T TIGR00887 132 DYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGA 211 (502)
T ss_pred hhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHH
Confidence 9999999999999999999999999999999998887777655431110 0000112111 12888887766
Q ss_pred HHHHHHHHH
Q 009176 517 SFCLFGTFL 525 (541)
Q Consensus 517 ~~~~~g~~l 525 (541)
..+++..+.
T Consensus 212 ip~~i~~~~ 220 (502)
T TIGR00887 212 VPALLALYF 220 (502)
T ss_pred HHHHHHHHH
Confidence 655554444
No 183
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.17 E-value=0.0017 Score=71.06 Aligned_cols=175 Identities=19% Similarity=0.223 Sum_probs=127.5
Q ss_pred HhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCCc--ccchhhhhhhcccccccccccc-hhhhcccCCCCChh
Q 009176 332 MLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSP 408 (541)
Q Consensus 332 ~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~ 408 (541)
.-++-..+||--|--|.. -++...+-.-|.++.+|+++ +...++.++.+-+.--+++|++ |+++ ++.
T Consensus 23 l~~if~vE~WERFsyYGm---raiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~L-------G~~ 92 (498)
T COG3104 23 LYLIFFVELWERFSYYGM---RAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVL-------GTR 92 (498)
T ss_pred HHHHHHHHHHHHHhhhhh---HHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhc-------chh
Confidence 457777888888777754 23444444445555567753 4457777777777777789999 6554 555
Q ss_pred HHHHHHHHHHHHHHHHHhhcc---cchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcc--cchhhhhhhhhhhhHHHHH
Q 009176 409 ASIGALMAPMAGAFMLLLNET---NVALYTSTAIIGVCSGAITSISVTTTTELFGTKNF--SVNHNIVVANIPIGSFLFG 483 (541)
Q Consensus 409 ~~l~~~~~~~~~~~ll~~~~~---~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~f--g~nyg~~~~a~~~Gs~l~~ 483 (541)
..++...+++.++|++++... ...++++.++|+.++|..=+-..++++|++..+.= -.-+++.+++..+|+++.|
T Consensus 93 ~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p 172 (498)
T COG3104 93 RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAP 172 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHH
Confidence 666666677888998887763 36799999999999999999999999999987653 3456677788889999999
Q ss_pred HHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 484 YLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 484 ~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
.+.+++-+.-+ |...|-+++.-..+|.+.-+..
T Consensus 173 ~i~~~~~~~~g-------------~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 173 IITGLLAINYG-------------WHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred HHHHHHHHhhC-------------HHHHHHHHHHHHHHHHHHHHHc
Confidence 99999976533 7888877776555555544444
No 184
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.12 E-value=0.0038 Score=64.38 Aligned_cols=128 Identities=16% Similarity=0.145 Sum_probs=86.3
Q ss_pred ccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcccc---------hhHHHHHHHHHhhhccchhhHHHhh
Q 009176 386 FGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETNV---------ALYTSTAIIGVCSGAITSISVTTTT 456 (541)
Q Consensus 386 ~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~---------~l~~~s~liG~~yG~~~~l~P~ivs 456 (541)
+|.+..|.+.|.. +|...+....+++.++.++.....+. .+.+.-.+.|++.|..++..++.++
T Consensus 50 i~~~~~G~l~dr~-------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~ 122 (394)
T TIGR00883 50 LGAIVFGHFGDRI-------GRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLA 122 (394)
T ss_pred hHHHHhhhhhhhh-------hhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhh
Confidence 4556667663321 45555555556666665555544431 2566678999999999999999999
Q ss_pred hhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHH
Q 009176 457 ELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFL 525 (541)
Q Consensus 457 e~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~l 525 (541)
|.+-.|+-+...++...+..+|..+++.+.+.+.+.-+.. . ....-+|..|++.+.+++++..+
T Consensus 123 ~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~--~---~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 123 EYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD--A---LLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred hcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--H---hhccchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998887776654311100 0 00011889998887766655443
No 185
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.12 E-value=0.003 Score=67.09 Aligned_cols=147 Identities=9% Similarity=0.054 Sum_probs=98.4
Q ss_pred HHhhhcCCcc--cchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc----chhHHHH
Q 009176 364 IAESRGCSGT--SSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN----VALYTST 437 (541)
Q Consensus 364 i~~slg~~~~--~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~----~~l~~~s 437 (541)
+-++.|++.. ..+.++... ...++++|.+.|....+.++ .|..++..+.+.+++++.++....+ ..+++..
T Consensus 25 ~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g-~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~ 101 (402)
T PRK11902 25 WMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLG-RRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLA 101 (402)
T ss_pred HHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCC-cchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 3455677532 333333333 46778888874432111111 2333445555556555554444321 1245555
Q ss_pred HHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHH
Q 009176 438 AIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGS 517 (541)
Q Consensus 438 ~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~ 517 (541)
.+.+++...+.....+++.|.+-.|+-+..-++...+..+|..+++.+++.+.|.... +|..|.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g------------w~~~f~i~a~ 169 (402)
T PRK11902 102 VLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG------------WGNTYLLMAG 169 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC------------HHHHHHHHHH
Confidence 6778888888899999999999999999999999999999999999999999886444 7999999988
Q ss_pred HHHHHHHH
Q 009176 518 FCLFGTFL 525 (541)
Q Consensus 518 ~~~~g~~l 525 (541)
++++..+.
T Consensus 170 ~~l~~~l~ 177 (402)
T PRK11902 170 LMLAGALT 177 (402)
T ss_pred HHHHHHHH
Confidence 77665544
No 186
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.10 E-value=0.0029 Score=67.98 Aligned_cols=122 Identities=13% Similarity=0.005 Sum_probs=85.6
Q ss_pred HHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhh---ccc-chhHH
Q 009176 362 GQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLN---ETN-VALYT 435 (541)
Q Consensus 362 g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~---~~~-~~l~~ 435 (541)
.++-+.++.+ +.....+...+...++.+..|.+.| +++|...+...+++++++.++... ..+ ..+.+
T Consensus 27 ~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~-------r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~ 99 (410)
T TIGR00885 27 PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMK-------KLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLV 99 (410)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 4444566765 3445556666666666666666532 125666666666666666555422 223 34666
Q ss_pred HHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHh
Q 009176 436 STAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVY 490 (541)
Q Consensus 436 ~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iy 490 (541)
...+.|++.|...+...+.+.+....|+.+..-|+......+|+.+++.+.+.+.
T Consensus 100 ~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 100 GLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7789999999999999999999988888888888888889999998888888775
No 187
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.07 E-value=0.00094 Score=58.04 Aligned_cols=101 Identities=19% Similarity=0.231 Sum_probs=78.6
Q ss_pred hhcc-cchhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCC
Q 009176 56 AGKL-FGWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFP 134 (541)
Q Consensus 56 ~G~~-~G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP 134 (541)
+|.. .+++.|.+.||++++..+.++.....++....... .++|.+.+..++.|.+.+..++.......+.+|
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-------SNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 4443 37889999999999999999998888887765532 245777777888888877766666556668888
Q ss_pred C-CCceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 135 F-DRQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 135 ~-~RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
+ +|+++.|+......+++.+-..+...+.
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLA 111 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHh
Confidence 6 6999999999888888888877777665
No 188
>PRK09952 shikimate transporter; Provisional
Probab=97.06 E-value=0.0077 Score=65.07 Aligned_cols=124 Identities=17% Similarity=0.068 Sum_probs=85.5
Q ss_pred ccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcccc---------hhHHHHHHHHHhhhccchhhHHHhh
Q 009176 386 FGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETNV---------ALYTSTAIIGVCSGAITSISVTTTT 456 (541)
Q Consensus 386 ~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~---------~l~~~s~liG~~yG~~~~l~P~ivs 456 (541)
+|.+..|.+.|. ++|...+...++++.++.++.++..+. .+.+.-.+.|++.|+.++...++++
T Consensus 79 ~g~~~~G~l~Dr-------~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~ 151 (438)
T PRK09952 79 LGGVVFGHFGDR-------LGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAV 151 (438)
T ss_pred hHHHHHHHHHHh-------hccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 444555766432 266676666777777776666665542 2556678999999999999999999
Q ss_pred hhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHH
Q 009176 457 ELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLF 521 (541)
Q Consensus 457 e~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~ 521 (541)
|.+..|+-|..-+....+..+|..+++.+.+.+...-+..+ ....-+|..|++.+..+++
T Consensus 152 e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~-----~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 152 ESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQ-----FLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred HhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH-----hhccChHHHHHHHHHHHHH
Confidence 99999999988888898999998888766665542211000 0001289999987765444
No 189
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.06 E-value=0.0023 Score=71.35 Aligned_cols=163 Identities=14% Similarity=0.130 Sum_probs=114.8
Q ss_pred HhhhhchhHHHHHHHHHHhhcccceeecchHHHHhhhc-------CCcccchhhhhhhcccccccc----cccchhhhcc
Q 009176 332 MLMLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRG-------CSGTSSLVSLSSSFGFFGRLI----PSLFGYFFSR 400 (541)
Q Consensus 332 ~q~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg-------~~~~~~~Vsl~Si~N~~GRl~----~G~~s~~~~~ 400 (541)
..-+|+++|..+|+.-.+. |+|.-.+..+ .++....|+++..+..+-.++ +|.+-|..
T Consensus 4 ~aplr~~~Fr~lw~a~~iS---------~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-- 72 (524)
T PF05977_consen 4 FAPLRNRNFRRLWIAQLIS---------NLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRF-- 72 (524)
T ss_pred cccccCchHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--
Confidence 4568899999999877654 5555444322 245678888888888877754 56663322
Q ss_pred cCCCCChhHHHHHHHHHHHHHHH---HHhhcc--c-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhh
Q 009176 401 SKHMIPSPASIGALMAPMAGAFM---LLLNET--N-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVAN 474 (541)
Q Consensus 401 ~~~~~~R~~~l~~~~~~~~~~~l---l~~~~~--~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a 474 (541)
+|...+..+.+++++..+ ++.... + ..+++.+.++|++-....+..-+++.|+...++....-.+..+.
T Consensus 73 -----drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~ 147 (524)
T PF05977_consen 73 -----DRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSIS 147 (524)
T ss_pred -----cchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHH
Confidence 344444444444333211 111111 2 45888899999999999999999999999999999888998888
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHH
Q 009176 475 IPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGT 523 (541)
Q Consensus 475 ~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~ 523 (541)
..++-.++|.++|.++..-+. ..+|.+.+...++.+
T Consensus 148 ~niar~iGPalgG~Lva~~G~-------------~~~f~inalsfl~~i 183 (524)
T PF05977_consen 148 FNIARIIGPALGGILVAFFGA-------------AAAFLINALSFLISI 183 (524)
T ss_pred HHHHHhccchHHHHHHHHHHH-------------HHHHHHHHHHHHHHH
Confidence 889989999999999987664 778888766555443
No 190
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=96.95 E-value=0.0011 Score=71.39 Aligned_cols=148 Identities=14% Similarity=0.090 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHhcCCccccccchHHHHHHhCCChh--------hHHHHHHhhhhhccc-chhhhhhccccchHHHHHHH
Q 009176 10 WLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQL--------QLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIG 80 (541)
Q Consensus 10 w~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~--------~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliG 80 (541)
|..+++++.++......| .|.+..-++.|++++ +...+-....++..+ .++.|.+.||+++|.++.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~ 287 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITN---IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLS 287 (418)
T ss_pred eeHHHHHHHHHhHHHHHH---HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 345555555555443333 444544455676653 333333344444433 68899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHH-HhhhhHHHHHHHH
Q 009176 81 STLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITS-SYLGLSAKLYTSA 158 (541)
Q Consensus 81 a~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk-~~~GLSaaift~i 158 (541)
.+...+++...-.. ... ...+|++.+..++.|.+....+.+...-..+.+|+ .||++.|+.- ...++++++=..+
T Consensus 288 ~~~~~v~~~l~~~~-~~~--~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l 364 (418)
T TIGR00889 288 LVAWALRFGFFAYG-DPE--YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYIL 364 (418)
T ss_pred HHHHHHHHHHHHHc-Ccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 98888876555432 111 11245555556666766665555555555688997 6999999995 5677777776666
Q ss_pred HHHHh
Q 009176 159 VNAIE 163 (541)
Q Consensus 159 ~~~~~ 163 (541)
...++
T Consensus 365 ~G~l~ 369 (418)
T TIGR00889 365 SGVMV 369 (418)
T ss_pred HHHHH
Confidence 66555
No 191
>PRK15075 citrate-proton symporter; Provisional
Probab=96.92 E-value=0.003 Score=67.89 Aligned_cols=134 Identities=14% Similarity=0.102 Sum_probs=75.6
Q ss_pred CccccccchHHH-HHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHH-HHHHHHHHHhhhcccc
Q 009176 25 TNSNFPAYSSQL-KQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGL-IGYGLQYLFLTHTISH 101 (541)
Q Consensus 25 t~Y~f~~ys~~l-k~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~-~GY~~~~l~~~~~i~~ 101 (541)
..|....|.|.. ++.+|+|+.|...+.....++..+ .++.|.+.||+++|.++.++.+... .++.........
T Consensus 253 ~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~---- 328 (434)
T PRK15075 253 SFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA---- 328 (434)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC----
Confidence 345566777874 566899999877777777676644 6788999999998888777655443 344322111121
Q ss_pred chHHHHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhh-HHHHHHHHHHHH
Q 009176 102 LSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGL-SAKLYTSAVNAI 162 (541)
Q Consensus 102 ~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GL-Saaift~i~~~~ 162 (541)
.+++.+.+...+.+.+....+........+.+|+ .||++.|+.-+.... .+++...+...+
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 329 PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHH
Confidence 1222221111111122222222222334577887 599999986554443 455555555443
No 192
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.91 E-value=0.0044 Score=68.18 Aligned_cols=156 Identities=17% Similarity=0.184 Sum_probs=117.7
Q ss_pred HHHhhhcCC--c-ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHH
Q 009176 363 QIAESRGCS--G-TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTA 438 (541)
Q Consensus 363 ~i~~slg~~--~-~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~ 438 (541)
.+.+.+|.+ + .....+.+...-.+.-+.+|++.|.+ + +|+...... +.-.+..++..+..+ ..+.+.=+
T Consensus 51 ~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl---G---~K~vL~l~~-l~Wsl~t~L~~fa~Sl~~L~i~R~ 123 (511)
T TIGR00806 51 YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL---R---YKPVLVLQA-LSFVCVWLLLLLGTSVWHMQLMEV 123 (511)
T ss_pred HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh---C---chHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566775 3 45788888888889999999995543 1 566544333 233333334444433 45777778
Q ss_pred HHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHH
Q 009176 439 IIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSF 518 (541)
Q Consensus 439 liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~ 518 (541)
+.|++-|..+ .+-.+++..|-.|+++.-.++...+..+|..+++.+++.+-. .+- +=|+.-.+|..+.
T Consensus 124 llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s-~gW----------r~y~~Ln~Isl~s 191 (511)
T TIGR00806 124 FYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVT-LGW----------ISYSTLNIISLVF 191 (511)
T ss_pred HHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCc----------hhHHHHHHHHHHH
Confidence 9999999999 999999999999999999999999999999999888887432 221 2299999999999
Q ss_pred HHHHHHHHHHHHhhhhccc
Q 009176 519 CLFGTFLALILYARTRKFY 537 (541)
Q Consensus 519 ~~~g~~lsl~l~~r~r~~Y 537 (541)
..++++++++|-...|..|
T Consensus 192 ~~~a~~~a~~LP~~~~sl~ 210 (511)
T TIGR00806 192 MTFSVFLALFLKRPKRSLF 210 (511)
T ss_pred HHHHHHHHHhCCCCchhhh
Confidence 9999999999987777654
No 193
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=96.89 E-value=0.003 Score=66.59 Aligned_cols=150 Identities=12% Similarity=0.022 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhh-hhccc-chhhhhhccccchHHHHHHHHHHHHHH
Q 009176 10 WLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASD-AGKLF-GWISGVASVYLPLWLVLLIGSTLGLIG 87 (541)
Q Consensus 10 w~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~-~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~G 87 (541)
|..++.....+...+..|.| .++-+++ +|+|.++...+-.... ++.-+ .++.|.+.||++++.++.++.+....+
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~--~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 211 WSLLALALLSAMTAVSGFGL--SKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHH--hhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 55566666666666666665 3566766 6999999887655443 34445 578999999999998888777655343
Q ss_pred HHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCC--CCCceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 88 YGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFP--FDRQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 88 Y~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP--~~RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
...+.........+..+.+.....+.+.......++.....++..+ ++||++.++.-+..++++.+-..+.-.++
T Consensus 288 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~ 364 (390)
T TIGR02718 288 -ALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLT 364 (390)
T ss_pred -HHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2344443332211223333333333333333222222223334443 57899999999999999988888877666
No 194
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=96.88 E-value=0.0066 Score=64.05 Aligned_cols=153 Identities=14% Similarity=0.035 Sum_probs=95.2
Q ss_pred HHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccc-hhhhcccCCCCChhHHHHHHHHH
Q 009176 341 WLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPASIGALMAP 417 (541)
Q Consensus 341 wllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~l~~~~~~ 417 (541)
++.|+.+.++.|. ++--++.+.+++|.+ +....+++..+...++-...|.+ ||+. +|..........
T Consensus 10 ~~~~~~~~~~~~~---~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~-------~~~~~~~~~~~~ 79 (382)
T TIGR00902 10 ALGFFGYFCAYGI---FLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDAN-------HIIIALRLLALA 79 (382)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------cHHHHHHHHHHH
Confidence 3444444444332 333466777888875 34556667676666666666655 5431 111111111111
Q ss_pred HHHH-HHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCC
Q 009176 418 MAGA-FMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGH 495 (541)
Q Consensus 418 ~~~~-~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~ 495 (541)
.++. .++....++ ..+++.-.+.|..++...++.-+++.|. .|+.+.+||.+.....+|..+++.+.|.+.|..+
T Consensus 80 ~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g- 156 (382)
T TIGR00902 80 SAIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD- 156 (382)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 1111 112222333 3456666678888888888888887764 6888999999999999999999999999999765
Q ss_pred CCCCCccccccccHHHHHHHHHH
Q 009176 496 NAHNGKCMGMACYRSTFILWGSF 518 (541)
Q Consensus 496 ~~~~~~C~G~~CY~~tF~i~~~~ 518 (541)
++..|.+.+.+
T Consensus 157 ------------~~~~f~~~~~~ 167 (382)
T TIGR00902 157 ------------EQNILAILTAG 167 (382)
T ss_pred ------------hhHHHHHHHHH
Confidence 57788877654
No 195
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.76 E-value=0.032 Score=60.76 Aligned_cols=108 Identities=23% Similarity=0.135 Sum_probs=82.4
Q ss_pred chHHHHHHhCCChhhHHHHHHhhhhhcccchhhhhhccccc-----hHHHHHHHHHHHHHHHHHHHHHhhhccccchHHH
Q 009176 32 YSSQLKQLLSLSQLQLNNLAFASDAGKLFGWISGVASVYLP-----LWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAH 106 (541)
Q Consensus 32 ys~~lk~~l~~sq~~l~~l~~~~~~G~~~G~~~Gll~d~~p-----p~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~ 106 (541)
-.+-+|+++|+|.+|++.+..-.++.-.+-.+-|++.|.+| .+.-+++|++++.++...+-+ ..+.. .+.+.
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~-~~~~~--~s~~~ 88 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLAL-LPASE--SSAAI 88 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHh-ccccc--chhhh
Confidence 35679999999999999999999999999999999999998 666778899988766555333 33322 23345
Q ss_pred HHHHHHHhccccccccce---eeeeecccCCCCCceehh
Q 009176 107 IFLLTVLAGNSICWINTV---CYVVTIKNFPFDRQVAVG 142 (541)
Q Consensus 107 l~~~~~l~g~g~~~~nTa---~lvt~v~NFP~~RG~a~g 142 (541)
..++++++..|....|.+ -++-.+|.-|++||..++
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS 127 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQS 127 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHH
Confidence 566677777777777664 467777999999776543
No 196
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.76 E-value=0.0092 Score=65.89 Aligned_cols=170 Identities=16% Similarity=0.104 Sum_probs=106.6
Q ss_pred ecchHHHHhhhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcccc----
Q 009176 358 LNNLGQIAESRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETNV---- 431 (541)
Q Consensus 358 I~n~g~i~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~---- 431 (541)
..++.++.+.+|.+. ......+-.+...+.-.+.|.++|-. |.|++..|++.+. .....+++++++++..+.
T Consensus 24 ~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~-~sr~GRRrp~il~-g~~~~~~~l~ll~~~~~~~~~~ 101 (477)
T TIGR01301 24 LSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRC-TSRFGRRRPFIAA-GAALVAFAVILIGFAADIGHLF 101 (477)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCC-CCCCCChHHHHHH-HHHHHHHHHHHHHhCchhhhhc
Confidence 346677778888753 44556666677777778889886643 3334444555433 233344444555443220
Q ss_pred -------------h-hHHHHHHHHHhhhccchhhHHHhhhhcCCCcc--cchhhhhhhhhhhhHHHHHHHHHHH--hhhc
Q 009176 432 -------------A-LYTSTAIIGVCSGAITSISVTTTTELFGTKNF--SVNHNIVVANIPIGSFLFGYLAALV--YHKE 493 (541)
Q Consensus 432 -------------~-l~~~s~liG~~yG~~~~l~P~ivse~FG~k~f--g~nyg~~~~a~~~Gs~l~~~laG~i--yD~~ 493 (541)
. ..++..+..++.....+-+.++++|++..++- +.-+++......+|+.+++.+.|.. ++..
T Consensus 102 ~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~ 181 (477)
T TIGR01301 102 GDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIF 181 (477)
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence 1 12233345568888888889999999998854 5788888888899999998777754 3321
Q ss_pred CCCCCCCcc-ccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 494 GHNAHNGKC-MGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 494 ~~~~~~~~C-~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
.-. .+..| .-..=++..|++.+++.++.++++++..
T Consensus 182 ~~~-~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v 218 (477)
T TIGR01301 182 PFT-KTEACGVSCANLKSCFLIDIILLAILTYIALSAV 218 (477)
T ss_pred ccc-cccccccccchHHHHHHHHHHHHHHHHHHHeeee
Confidence 110 11122 2222379999999888888777777654
No 197
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.75 E-value=0.0057 Score=67.80 Aligned_cols=143 Identities=17% Similarity=0.206 Sum_probs=104.0
Q ss_pred cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHH-HHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccch
Q 009176 372 GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIG-ALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITS 449 (541)
Q Consensus 372 ~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~-~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~ 449 (541)
+-....+++.+.-.+|.+.+|++.|-. |-...+. ....-.+.+.+- ....+ ..+.+.=.+.|++=++.|+
T Consensus 82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~-------~ls~~l~~~~~~w~~~~~~~-~~~~s~~~~ialr~llGl~es~~wP 153 (495)
T KOG2533|consen 82 QLGVLDTVFYVGYIIGQFPSGLLGDRF-------PLSKGLSVSGILWGLFGFLT-AAVHSFPGLIALRFLLGLFESGGWP 153 (495)
T ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHhC-------ChHHHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHhcccch
Confidence 345688888888889999999884422 3112221 111111111111 12334 3355556899999999999
Q ss_pred hhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 450 ISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 450 l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
..-.+++.+|+.++.|...|+.+.+..+|+.+++.++..++..++.. +...||..|+|.++++++..++.++.
T Consensus 154 ~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~-------~~~gW~~~FiI~G~i~~~~gi~~f~~ 226 (495)
T KOG2533|consen 154 GVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG-------GLAGWRWLFIIEGVITLVLGIVVFFF 226 (495)
T ss_pred HHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC-------CcCCceeehhHHHHHHHHHHheEEEE
Confidence 99999999999999999999999999999999999999988765552 44559999999999887777665543
No 198
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.71 E-value=0.0027 Score=67.90 Aligned_cols=140 Identities=14% Similarity=0.155 Sum_probs=112.3
Q ss_pred cchhhhhhhcccccccccccc-hhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhh
Q 009176 374 SSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSIS 451 (541)
Q Consensus 374 ~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~ 451 (541)
.++.+..++.+.+---+.|.+ |++ ++..-+.+-+.+|..+-+++++..+ ..+.++=.+=|++..+.+..-
T Consensus 109 G~LFaskA~~qllvnp~~G~l~~~i--------Gy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 109 GLLFASKALVQLLVNPFFGNLIDRI--------GYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred hHHHHHHHHHHHHhcccchhhHHHh--------ccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 345555566666655555555 543 4555566677777777778877766 568888899999999999999
Q ss_pred HHHhhhhcCCCcc-cchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 452 VTTTTELFGTKNF-SVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 452 P~ivse~FG~k~f-g~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
-++.+|.|+.+|= |.--|+.....++|-+++|++.|.+||.-+ |+..|+|++.++++..++.+.+.
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-------------k~aPFlVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-------------KSAPFLVLAIVLLLDGALQLLVI 247 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-------------CcCcHHHHHHHHHHHHHHHHhee
Confidence 9999999999996 888899888899999999999999999876 59999999999999999988886
Q ss_pred hhhh
Q 009176 531 ARTR 534 (541)
Q Consensus 531 ~r~r 534 (541)
..+|
T Consensus 248 ~p~~ 251 (464)
T KOG3764|consen 248 EPTE 251 (464)
T ss_pred Cccc
Confidence 6554
No 199
>PRK10133 L-fucose transporter; Provisional
Probab=96.66 E-value=0.012 Score=63.97 Aligned_cols=142 Identities=15% Similarity=0.036 Sum_probs=93.2
Q ss_pred hHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccc-hhhhcccCCCCChhHHHHHHH
Q 009176 339 DFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPASIGALM 415 (541)
Q Consensus 339 ~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~l~~~~ 415 (541)
.|++++++++.-...-.+...-+.++.++++.+ +....++...+...++-+..|.+ |++ +|...+...+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~--------G~r~~l~~g~ 98 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL--------SYKAGIITGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CcHHHHHHHH
Confidence 466666655443322222223455666677875 45567777888888888887777 443 5555555566
Q ss_pred HHHHHHHHHH---hhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccc-hhhhhhhhhhhhHHHHHHHHHHH
Q 009176 416 APMAGAFMLL---LNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSV-NHNIVVANIPIGSFLFGYLAALV 489 (541)
Q Consensus 416 ~~~~~~~ll~---~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~-nyg~~~~a~~~Gs~l~~~laG~i 489 (541)
++++++.++. ....+ ..+.+.-.+.|++.|..+....+++.|. ..++-+. .-++....+.+|..+++.+.+.+
T Consensus 99 ~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~-~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 99 FLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVL-GPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-CChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666665543 22333 3466677899999999999999999986 5555553 56777788888888887666554
No 200
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.65 E-value=0.008 Score=66.27 Aligned_cols=128 Identities=13% Similarity=0.011 Sum_probs=103.1
Q ss_pred chhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHH
Q 009176 375 SLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVT 453 (541)
Q Consensus 375 ~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ 453 (541)
+..++.-+...+|=++.|.++|.+ +|...+...++++.++.++.++..+ ..+.+.=.+.|++.++.+.+...
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~-------GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~ 194 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRF-------GRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFG 194 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhc-------ccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHh
Confidence 445555566667888888886643 7888887777777777777777777 45777779999999999999999
Q ss_pred HhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHH
Q 009176 454 TTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFL 525 (541)
Q Consensus 454 ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~l 525 (541)
+++|+++.|+=+..=.+ ...+-.++++++.+++++.. + +|..+++....+++.+++
T Consensus 195 ~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~------------Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 195 LVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---D------------WRWLFWIISIPSGLFLLL 250 (521)
T ss_pred hheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---h------------HHHHHHHHHHHHHHHHHH
Confidence 99999999999888887 66777778888888888876 3 999999999888877776
No 201
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=96.64 E-value=0.012 Score=63.50 Aligned_cols=148 Identities=18% Similarity=0.086 Sum_probs=114.8
Q ss_pred HHHHhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHH
Q 009176 362 GQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTA 438 (541)
Q Consensus 362 g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~ 438 (541)
..|.++.|++ +..+.-|.++|.=.+++...|.++|-. . ||.. +...+++.++..+++-+..+ ..+.+.-.
T Consensus 53 p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~---n---pr~f-m~~gLilsai~nil~Gfs~s~~~~~~l~~ 125 (448)
T COG2271 53 PALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS---N---PRYF-MAFGLILSAIVNILFGFSPSLFLFAVLWV 125 (448)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC---C---Ccee-ehHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 3455566675 556799999999999999999996632 1 5544 34455556666666555444 34556667
Q ss_pred HHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHH--HHHhhhcCCCCCCCccccccccHHHHHHHH
Q 009176 439 IIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLA--ALVYHKEGHNAHNGKCMGMACYRSTFILWG 516 (541)
Q Consensus 439 liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~la--G~iyD~~~~~~~~~~C~G~~CY~~tF~i~~ 516 (541)
+-|+.=|..|+-.-.++..+|..|.=|+-|++-.++.-+|+-+-+.++ |++-++. + .|.+|++-+
T Consensus 126 lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~-~------------w~~~f~~pg 192 (448)
T COG2271 126 LNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG-G------------WRAAFYFPG 192 (448)
T ss_pred HHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc-c------------hhHHHHHHH
Confidence 889999999999999999999999999999999999999999998888 8887766 3 799999999
Q ss_pred HHHHHHHHHHHHH
Q 009176 517 SFCLFGTFLALIL 529 (541)
Q Consensus 517 ~~~~~g~~lsl~l 529 (541)
+++++-.++.+.+
T Consensus 193 iiaiival~~~~~ 205 (448)
T COG2271 193 IIAIIVALILLFL 205 (448)
T ss_pred HHHHHHHHHHHHH
Confidence 8876665555554
No 202
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=96.44 E-value=0.023 Score=61.09 Aligned_cols=105 Identities=13% Similarity=0.076 Sum_probs=73.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHhhccc---------chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhh
Q 009176 406 PSPASIGALMAPMAGAFMLLLNETN---------VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIP 476 (541)
Q Consensus 406 ~R~~~l~~~~~~~~~~~ll~~~~~~---------~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~ 476 (541)
+|...+....+++.++.++.+...+ ..+.+.=.+.|++.|+.++...++++|.+-.|+-|...++...+..
T Consensus 91 Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~ 170 (432)
T PRK10406 91 GRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLI 170 (432)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHH
Confidence 6777777777777776666554332 1366677899999999999999999999999998887777766666
Q ss_pred hhHHHHHHHHHHHh----hh---cCCCCCCCccccccccHHHHHHHHHHHHHH
Q 009176 477 IGSFLFGYLAALVY----HK---EGHNAHNGKCMGMACYRSTFILWGSFCLFG 522 (541)
Q Consensus 477 ~Gs~l~~~laG~iy----D~---~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g 522 (541)
.|..+.+.+...+. |. +-. +|..|++.+..+++.
T Consensus 171 ~G~~~~~~~~~~~~~~~~~~~~~~~g------------Wr~~F~i~~~~~ll~ 211 (432)
T PRK10406 171 GGQLLALLVVVVLQQTLEDAELREWG------------WRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHhccc------------hHHHHHHHHHHHHHH
Confidence 66555544333222 21 122 899999877665544
No 203
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.35 E-value=0.021 Score=65.41 Aligned_cols=140 Identities=15% Similarity=0.153 Sum_probs=98.7
Q ss_pred chhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcc-c--------chhHHHHHHHHHhhh
Q 009176 375 SLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNET-N--------VALYTSTAIIGVCSG 445 (541)
Q Consensus 375 ~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~-~--------~~l~~~s~liG~~yG 445 (541)
..+..+.-+..+--+++|++.|- +++|.+++....++..+++.+++... + ..++++-+++.++-|
T Consensus 27 ~i~~~f~~l~yl~pilGg~iAD~------~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~G 100 (654)
T TIGR00926 27 VLFHTFTYLCYLTPLIGAIIADG------WLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTG 100 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH------HhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhcc
Confidence 34444444444444556666331 34777877777777777776665421 1 136677889999999
Q ss_pred ccchhhHHHhhhhcCCC---cccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCcccc-ccccHHHHHHHHHHHHH
Q 009176 446 AITSISVTTTTELFGTK---NFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMG-MACYRSTFILWGSFCLF 521 (541)
Q Consensus 446 ~~~~l~P~ivse~FG~k---~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G-~~CY~~tF~i~~~~~~~ 521 (541)
+.=+.+.+..+|.|..+ .+-.-|++-+.+..+|+++.+.+.+++-+. ..|.| ..||..+|.+.+++.++
T Consensus 101 giKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~-------~~~fg~~~~~~~aF~i~~i~m~i 173 (654)
T TIGR00926 101 GIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGD-------VGCFGCQDCYPLAFGVPAILMIL 173 (654)
T ss_pred ccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hcccccCcchHHHHHHHHHHHHH
Confidence 99999999999999854 377788888889999999998888877532 13555 46899999999888777
Q ss_pred HHHHHH
Q 009176 522 GTFLAL 527 (541)
Q Consensus 522 g~~lsl 527 (541)
+.++-+
T Consensus 174 a~lvf~ 179 (654)
T TIGR00926 174 ALIVFM 179 (654)
T ss_pred HHHHHH
Confidence 765543
No 204
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.25 E-value=0.016 Score=64.04 Aligned_cols=132 Identities=13% Similarity=0.059 Sum_probs=101.3
Q ss_pred cchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhH
Q 009176 374 SSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISV 452 (541)
Q Consensus 374 ~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P 452 (541)
+.++|..++.+..|.+.+|.++|.. +|..++.+..++..++-++.+...+ ..+.++-++.|+++|+.-.+.|
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~-------GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~p 164 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRI-------GRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAP 164 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcch
Confidence 6899999999999999999997754 7888777777777777777766666 5688899999999999999999
Q ss_pred HHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhc-CCCCCCCccccccccHHHHHHHHHHHHHHHHH
Q 009176 453 TTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKE-GHNAHNGKCMGMACYRSTFILWGSFCLFGTFL 525 (541)
Q Consensus 453 ~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~-~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~l 525 (541)
..++|+=..+.=|..=.+..+...+|-.++ .+.|+..+.. .. ||..+.+....+++-.+.
T Consensus 165 iy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~------------Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 165 VYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAG------------WRIPLGLALIPAVILALG 225 (513)
T ss_pred hhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCcc------------HHHHHHHHHHHHHHHHHH
Confidence 999999766666666666666666555554 5555555433 12 887777777777666666
No 205
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.12 E-value=0.038 Score=57.06 Aligned_cols=144 Identities=12% Similarity=0.148 Sum_probs=87.3
Q ss_pred hhHHHHHHHHHHhhcccceeecchHHH--HhhhcCCc--ccchhhhhhhcccccccccccc-hhhhcccCCCCChh-HHH
Q 009176 338 VDFWLYFFVYFSGATLGLVFLNNLGQI--AESRGCSG--TSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSP-ASI 411 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Glm~I~n~g~i--~~slg~~~--~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~-~~l 411 (541)
+.||+++++-.+-.-+=.-.| -+||+ .+..|.+. +...-|++-.-+..---..|.+ |++ +|. ||.
T Consensus 264 ppfw~~~iicv~yyva~fPFi-~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~--------G~n~~wv 334 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFI-TLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY--------GFNLWWV 334 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHh-hhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh--------cceehhH
Confidence 569999887665421111111 23333 24467653 2222332222222222223444 544 333 455
Q ss_pred HHHHHHHHHHHHHHhhcccchhHHHHHHHHHhhhc----cchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHH
Q 009176 412 GALMAPMAGAFMLLLNETNVALYTSTAIIGVCSGA----ITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAA 487 (541)
Q Consensus 412 ~~~~~~~~~~~ll~~~~~~~~l~~~s~liG~~yG~----~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG 487 (541)
+...+...++|..+.++. ..=|++..+.|++|-. .|+..|.++.| +..||.||+++.-.-+|--+-+.++|
T Consensus 335 ~~a~~~tl~~H~~l~Ft~-lsPy~~m~~lGLsysllAcslWP~va~~vpE----~qLGTaygf~qsIqNLgla~i~Iiag 409 (459)
T KOG4686|consen 335 ASACILTLLGHSGLFFTF-LSPYTSMTFLGLSYSLLACSLWPCVASLVPE----EQLGTAYGFIQSIQNLGLAFIPIIAG 409 (459)
T ss_pred HHHHHHHHHHhhhHHhhh-ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCH----HHhcchHHHHHHHHhhhhhHHhhhhh
Confidence 555566667776665532 2256788889999875 67778888877 48899999999888888777799999
Q ss_pred HHhhhcCC
Q 009176 488 LVYHKEGH 495 (541)
Q Consensus 488 ~iyD~~~~ 495 (541)
.|-|..++
T Consensus 410 ~i~d~~g~ 417 (459)
T KOG4686|consen 410 FIADGDGS 417 (459)
T ss_pred eeecCCCc
Confidence 99998876
No 206
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.10 E-value=0.022 Score=60.72 Aligned_cols=110 Identities=14% Similarity=0.098 Sum_probs=82.2
Q ss_pred chhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHhhhccchhhHHH
Q 009176 375 SLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTT 454 (541)
Q Consensus 375 ~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~i 454 (541)
..=|.+++..++--..+|-.||.. +|.-.+.++.+..++..++.+...+...++.+=.+|-++=+..++.-++
T Consensus 72 flGSsF~ilQ~~sS~~~G~~SD~y-------GRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAi 144 (451)
T KOG2615|consen 72 FLGSSFSILQFISSPLWGCLSDRY-------GRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAI 144 (451)
T ss_pred hHhhHHHHHHHHhhhhhhhhhhhh-------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHH
Confidence 355677777777777777776542 5666565565555666666665555434444445555666689999999
Q ss_pred hhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhh
Q 009176 455 TTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYH 491 (541)
Q Consensus 455 vse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD 491 (541)
++|.+-.||-+.-.+.+.+++++|-+++|.+.|++-.
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 9999999999999999999999999999999998866
No 207
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=95.87 E-value=0.04 Score=58.58 Aligned_cols=155 Identities=10% Similarity=0.039 Sum_probs=91.9
Q ss_pred hhcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-------chhHHHH
Q 009176 367 SRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-------VALYTST 437 (541)
Q Consensus 367 slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-------~~l~~~s 437 (541)
.+|.+ ......++..++..+.....|.++|-. ++|++-.||+.+.. ..+++++.+++....+ ..+.+..
T Consensus 29 ~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~-~~r~Grrr~~i~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 106 (437)
T TIGR00792 29 VLGLSAAFVGTLFLVARILDAITDPIMGNIVDRT-RTRWGKFRPWLLIG-AIPFSIVLVLLFTTPDFSATGKLVYAYITY 106 (437)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhccchheEeeecC-CCCCCCcchhHHHh-HHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 45554 345678888899999999999985543 23333345665543 3334444444433221 1233445
Q ss_pred HHHHHhhhccchhhHHHhhhhcC-CCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHH
Q 009176 438 AIIGVCSGAITSISVTTTTELFG-TKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWG 516 (541)
Q Consensus 438 ~liG~~yG~~~~l~P~ivse~FG-~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~ 516 (541)
.+.+.+++....-+-+..+|+.. .|.-+...++-.....+|+.+.+.+.+.+...-+.. + ...-|+..|.+.+
T Consensus 107 ~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~-~-----~~~g~~~~~~i~~ 180 (437)
T TIGR00792 107 ILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGG-D-----DKFGWFMFALVLA 180 (437)
T ss_pred HHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-c-----ccccHHHHHHHHH
Confidence 66777887765555677777763 466666777777777777777666666665432210 0 0112888888888
Q ss_pred HHHHHHHHHHHHH
Q 009176 517 SFCLFGTFLALIL 529 (541)
Q Consensus 517 ~~~~~g~~lsl~l 529 (541)
+++++..++....
T Consensus 181 ~l~~~~~~~~~~~ 193 (437)
T TIGR00792 181 LIGVVSLIICFFG 193 (437)
T ss_pred HHHHHHHHHHHcC
Confidence 8777666555433
No 208
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=95.03 E-value=0.0029 Score=68.65 Aligned_cols=136 Identities=13% Similarity=0.058 Sum_probs=99.0
Q ss_pred chhhhhhhcccccccccccc-hhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcccch-hHHHHHHHHHhhhccchhhH
Q 009176 375 SLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETNVA-LYTSTAIIGVCSGAITSISV 452 (541)
Q Consensus 375 ~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~-l~~~s~liG~~yG~~~~l~P 452 (541)
++-..+.+.-.+.-.+.|++ |++ .|++.++....+-.++.++..+....+ +.+.=.++|+.-...-++.|
T Consensus 72 ll~~vf~v~~~i~sPl~gyLadry--------NR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~ 143 (493)
T KOG1330|consen 72 LLQTVFIVVFMIASPLFGYLADRY--------NRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAP 143 (493)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhc--------CcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccch
Confidence 33344444444444556777 433 677776665555555555554443322 44456799999999999999
Q ss_pred HHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 453 TTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 453 ~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
++++|.|--.+=|.-+++.+++.|+|+.++-.+.+++-+.+.. +|.+|.+.+++.++..++.++..
T Consensus 144 s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~------------Wr~af~~~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 144 SLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW------------WRWAFRGSAVLGVIVGLLVFLFV 209 (493)
T ss_pred hHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc------------eEEEEEeehHHHHHHHHHHHhhc
Confidence 9999999999999999999999999998886566666666555 89999999999887777776664
No 209
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=94.51 E-value=0.31 Score=53.47 Aligned_cols=177 Identities=14% Similarity=0.043 Sum_probs=106.3
Q ss_pred hchhHHHHHHHHHHhhcccceeecchHHHHh-hhcCCc--ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHH
Q 009176 336 QRVDFWLYFFVYFSGATLGLVFLNNLGQIAE-SRGCSG--TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIG 412 (541)
Q Consensus 336 ~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~-slg~~~--~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~ 412 (541)
.+....++...| +..|..-+....+..+-+ .+|.+. ....+++..+--.+ +.++|.++|.... ++..|.+.+.
T Consensus 24 ~~~~~~~~~~~y-~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i--~G~rRr~~l~ 99 (468)
T TIGR00788 24 PRVVLAIGLQVL-FVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPL--FGYTKRWYLV 99 (468)
T ss_pred cchHHHHHHHHH-HHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCC--CCccchHHHH
Confidence 344455555555 344554333334455555 578864 33566776665555 5568888554421 1334666655
Q ss_pred HHHHHH-HHHHHHHhhccc-chhHH-HHHHHHHhhhccchhhHHHhhhhcCCCcccc---hhhhhhhhhhhhHHHHHHHH
Q 009176 413 ALMAPM-AGAFMLLLNETN-VALYT-STAIIGVCSGAITSISVTTTTELFGTKNFSV---NHNIVVANIPIGSFLFGYLA 486 (541)
Q Consensus 413 ~~~~~~-~~~~ll~~~~~~-~~l~~-~s~liG~~yG~~~~l~P~ivse~FG~k~fg~---nyg~~~~a~~~Gs~l~~~la 486 (541)
+..++. +.+...++...+ ..+++ ...+++++.+.+-...=+++.|..- +.-+. +.........+|..+++.++
T Consensus 100 ~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~ 178 (468)
T TIGR00788 100 LSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLG 178 (468)
T ss_pred HHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHH
Confidence 554444 233333332222 22333 5568899999888889999999987 44332 33344444457888888999
Q ss_pred HHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 009176 487 ALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILY 530 (541)
Q Consensus 487 G~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~ 530 (541)
|.+.|..+ .+..|++.+.+.++..+..+++.
T Consensus 179 G~l~~~~~-------------~~~~f~~~a~l~ll~~~~~~~~~ 209 (468)
T TIGR00788 179 GPLLDKTL-------------TRILFLITAALLLLQLFVSNLSK 209 (468)
T ss_pred HHHHHhcC-------------cchHHHHHHHHHHHHHHHHHhcc
Confidence 99998765 58899999888877755444443
No 210
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=94.20 E-value=0.4 Score=53.52 Aligned_cols=170 Identities=21% Similarity=0.237 Sum_probs=114.5
Q ss_pred hhhchhHHHHHHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccc-cccccccchhhhcccCCCCChhHH
Q 009176 334 MLQRVDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFF-GRLIPSLFGYFFSRSKHMIPSPAS 410 (541)
Q Consensus 334 ~l~~~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~-GRl~~G~~s~~~~~~~~~~~R~~~ 410 (541)
...=.-|+...+++.+-...|+- ...+.|.++.+ +.+...|+.+-+..+ |=+.+...+++. .|...
T Consensus 46 vV~~a~fl~~~~~~g~~~~~Gv~----~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg-------~R~v~ 114 (509)
T KOG2504|consen 46 VVVFASFLVNLSTDGLINSFGLL----FEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFG-------CRTVM 114 (509)
T ss_pred eeeHhHHHHHHhhhcchheehhh----HHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcC-------chHHH
Confidence 34445577777777777777622 12334555543 234455554433333 433333334432 46665
Q ss_pred HHHHHHHHHHHHHHHhhcccc-hhHH-HHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHH
Q 009176 411 IGALMAPMAGAFMLLLNETNV-ALYT-STAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAAL 488 (541)
Q Consensus 411 l~~~~~~~~~~~ll~~~~~~~-~l~~-~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~ 488 (541)
++.. ++..+++++.++..+. .+++ ..++.|+++|..+.-...++..+| .|+=+.-=|+...+.++|.++++++--+
T Consensus 115 i~G~-~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~ 192 (509)
T KOG2504|consen 115 IAGG-LVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKY 192 (509)
T ss_pred HHHH-HHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHH
Confidence 5543 4566777777777763 3454 567889999999999999999766 5666788899999999999999999999
Q ss_pred HhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 489 VYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 489 iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
+.|..+ +|.++++.+.+++-.++..+.+
T Consensus 193 l~~~~G-------------~r~~~l~~~~~~l~~~~~~~~~ 220 (509)
T KOG2504|consen 193 LLSKYG-------------WRGALLIFGGISLNVLVAGALL 220 (509)
T ss_pred HHHHhC-------------cHHHHHHHHHHHHHHHHHHHHc
Confidence 999887 5999999999885555555544
No 211
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=94.06 E-value=0.54 Score=51.63 Aligned_cols=177 Identities=20% Similarity=0.192 Sum_probs=112.8
Q ss_pred HHHHHHHHHhhcccce-------eecchHHHHhhhcCC-c---------ccchhhh-hhhcccccccccccchhhhcccC
Q 009176 341 WLYFFVYFSGATLGLV-------FLNNLGQIAESRGCS-G---------TSSLVSL-SSSFGFFGRLIPSLFGYFFSRSK 402 (541)
Q Consensus 341 wllf~~~~~g~g~Glm-------~I~n~g~i~~slg~~-~---------~~~~Vsl-~Si~N~~GRl~~G~~s~~~~~~~ 402 (541)
|.+|..+.+ +|.|++ .||-+-+|-.-+.+. + ....|.. -.+.|.+|.++.|++.|++
T Consensus 37 w~~fk~i~i-AG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~---- 111 (538)
T KOG0252|consen 37 WKHFKAIII-AGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF---- 111 (538)
T ss_pred HHHHHHHHH-hhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh----
Confidence 566665544 578877 345555554444221 1 1223333 3455788999999996654
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHhhcc----c----chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhh
Q 009176 403 HMIPSPASIGALMAPMAGAFMLLLNET----N----VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVAN 474 (541)
Q Consensus 403 ~~~~R~~~l~~~~~~~~~~~ll~~~~~----~----~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a 474 (541)
+|...+-..+++|.++-++...+. + .+|...=.++|+.-|+=+++..+++||.=-.|.=|+.-+.++..
T Consensus 112 ---GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~ 188 (538)
T KOG0252|consen 112 ---GRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAM 188 (538)
T ss_pred ---cchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEe
Confidence 666777667777777755544332 2 13444456999999999999999999999999988888888777
Q ss_pred hhhhHHHHHH---HHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHH-HHHhhh
Q 009176 475 IPIGSFLFGY---LAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLAL-ILYART 533 (541)
Q Consensus 475 ~~~Gs~l~~~---laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl-~l~~r~ 533 (541)
.+.|-..+.. +.-.++++ .|.+..||+..=.++=....+|++-++ ++++|-
T Consensus 189 Qg~GilaG~ivt~Iv~~~fe~--------~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl 243 (538)
T KOG0252|consen 189 QGFGILAGGIVALIVSAIFEK--------IFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRL 243 (538)
T ss_pred cchhHhhccHHHHHHHHHHhc--------cCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 7766555532 22333433 244557787777777666666666544 334443
No 212
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=93.62 E-value=0.22 Score=54.99 Aligned_cols=104 Identities=14% Similarity=0.087 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHhhccc---chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHh
Q 009176 414 LMAPMAGAFMLLLNETN---VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVY 490 (541)
Q Consensus 414 ~~~~~~~~~ll~~~~~~---~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iy 490 (541)
..++.+++-++.+...+ ..+.+.=.+-|+++|..|+.+..+++.++-++.-++-.++++.+..+|..+.-+++|.+=
T Consensus 109 ~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc 188 (466)
T KOG2532|consen 109 SGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLC 188 (466)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence 33444455455443332 234556689999999999999999999999999999999999999999999988999998
Q ss_pred hhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 491 HKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 491 D~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
+..-. .+..|++.++++++=.++-+++
T Consensus 189 ~s~~G------------W~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 189 ESSLG------------WPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred ccCCC------------CchHHHHHHHHHHHHHHHHHHH
Confidence 87555 8999999999877666554444
No 213
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.36 E-value=0.37 Score=50.86 Aligned_cols=113 Identities=19% Similarity=0.155 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHHhh---ccc-------chhHHHHHHHHHhhhccchhhHHHhhhhcCCCc---ccchhhhhhhhhh
Q 009176 410 SIGALMAPMAGAFMLLLN---ETN-------VALYTSTAIIGVCSGAITSISVTTTTELFGTKN---FSVNHNIVVANIP 476 (541)
Q Consensus 410 ~l~~~~~~~~~~~ll~~~---~~~-------~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~---fg~nyg~~~~a~~ 476 (541)
++.+..++++++++++.. +.. ..++++-.+++++.|+.=+..+++.+|.|-.++ ...-|+..+.+.-
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in 82 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGIN 82 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHh
Confidence 344555667777766322 111 258999999999999999999999999998763 4556677788888
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q 009176 477 IGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRKFYSQ 539 (541)
Q Consensus 477 ~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~~Y~~ 539 (541)
+|+++...+.+++-|+.+ |...|.+.++..+++.+ ...-.||.|+.
T Consensus 83 ~G~~~~~~~~~~i~~~~~-------------~~~~f~i~~~~~~~~~~----~f~~~~~~y~~ 128 (372)
T PF00854_consen 83 IGSLFSPTLVPYIQQNYG-------------WFLGFGIPAIGMLLALI----VFLSGRKRYRK 128 (372)
T ss_dssp HHHHHHHHCCCHHHHCS--------------HHHHHHHHHHHHHHHHH----HHHCCCCTT--
T ss_pred hhhHhhcccchhhccccc-------------hhhhhhHHHHHHHHHHH----HHHhCCcCCcC
Confidence 999998888888875433 89999888776665554 33334444543
No 214
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=93.34 E-value=9.8 Score=41.27 Aligned_cols=192 Identities=18% Similarity=0.150 Sum_probs=99.8
Q ss_pred CHHhhhhchhHHHHHHHHHHhhcccceeec-chHHH-HhhhcCC--cccchhhhhhhcccccccccccchhhhcccCCCC
Q 009176 330 GAMLMLQRVDFWLYFFVYFSGATLGLVFLN-NLGQI-AESRGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMI 405 (541)
Q Consensus 330 t~~q~l~~~~Fwllf~~~~~g~g~Glm~I~-n~g~i-~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~ 405 (541)
.+++...+++--..|+..+++.-+ +-.-+ -+-+. +|-+|++ +++-+-++.+..-.+|-+..|+. +.|+. +.
T Consensus 200 a~~~~~~~~~a~~f~~fl~l~t~a-~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~---l~~~~-~~ 274 (403)
T PF03209_consen 200 AWRQVWASPQARRFFVFLFLGTLA-FFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFL---LSRRL-GK 274 (403)
T ss_pred HHHHHHhCCChhHHHHHHHHHHHH-HHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCC-Cc
Confidence 346666677666666555544211 10000 00000 2334553 44445555665555666665554 11111 22
Q ss_pred ChhHHHHHHHHHHHHHHHHHh-hccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHH
Q 009176 406 PSPASIGALMAPMAGAFMLLL-NETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFG 483 (541)
Q Consensus 406 ~R~~~l~~~~~~~~~~~ll~~-~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~ 483 (541)
.|...+-+.....+...+.++ ...+ ..+..+..++|++.|..-.-.-+..-|+=...+-|+-=|.--.+.+++--++.
T Consensus 275 ~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~ 354 (403)
T PF03209_consen 275 KRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGT 354 (403)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence 233222222222222222222 2223 45778889999999987666667777777778888776776666666666667
Q ss_pred HHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 484 YLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 484 ~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
.+.|-+.|--..-.+. .=..-|...|.+=+.+.++++++..-+
T Consensus 355 ~~GG~~~D~~~~~~~~---~~~~aY~~VF~lEa~ll~~a~~ll~~l 397 (403)
T PF03209_consen 355 FLGGALRDLVRALFGN---SPALAYGVVFALEAVLLLAALVLLGRL 397 (403)
T ss_pred HHHHHHHHHHHHhccC---CcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777777753211000 001127777877766665555444433
No 215
>PRK09848 glucuronide transporter; Provisional
Probab=93.30 E-value=0.065 Score=57.82 Aligned_cols=154 Identities=12% Similarity=0.009 Sum_probs=91.0
Q ss_pred HHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhc
Q 009176 37 KQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAG 115 (541)
Q Consensus 37 k~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g 115 (541)
++.+|.+..+...+.....++.-+ .++.|.+.||++++.++.+|.+...+|+..++.. +..++|.+.+.+++.|
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~g 330 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV-----SVWSLPVALVALAIAS 330 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-----CchhHHHHHHHHHHHH
Confidence 556777665544444443455543 6788999999999999999999999999887742 1234676666677777
Q ss_pred cccccccceeeeeecccCC--------CCCceehhhHHHhhhh----HHHHHHHHHHHH-hcCCCCCcccc----hhhhh
Q 009176 116 NSICWINTVCYVVTIKNFP--------FDRQVAVGITSSYLGL----SAKLYTSAVNAI-ETSSPNKRAKL----YLLFN 178 (541)
Q Consensus 116 ~g~~~~nTa~lvt~v~NFP--------~~RG~a~gllk~~~GL----Saaift~i~~~~-~~~~~~~d~~~----fLlll 178 (541)
.|....++.........=| +.+|...|+.--..-+ ++++.+.+.... |..+ ..++++ +-...
T Consensus 331 ~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~~~~-~~~~~~~~~~i~~~~ 409 (448)
T PRK09848 331 IGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIAN-QVQTPEVIMGIRTSI 409 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC-CcCCHHHHHHHHHHH
Confidence 7776655443322222222 1347776664444334 444444444332 2111 112323 44555
Q ss_pred chhhhHhHhhccceeeee
Q 009176 179 SIFPLLACVVTSPVVREI 196 (541)
Q Consensus 179 a~~p~~v~l~~~~~ir~~ 196 (541)
.++|.+..++...+.+-+
T Consensus 410 ~~~p~~~~~~~~~~~~~y 427 (448)
T PRK09848 410 ALVPCGFMLLAFVIIWFY 427 (448)
T ss_pred HHHHHHHHHHHHHHHHHe
Confidence 678888777776666655
No 216
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=93.26 E-value=0.25 Score=53.34 Aligned_cols=147 Identities=16% Similarity=0.111 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhcc-cchhhhhhccccchHHHHHHHHHHHHHHH
Q 009176 10 WLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKL-FGWISGVASVYLPLWLVLLIGSTLGLIGY 88 (541)
Q Consensus 10 w~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~-~G~~~Gll~d~~pp~~vlliGa~~~~~GY 88 (541)
++-++++..++...+..|.|. +.-+++.-+++.+....+-..+-+.+. +=..++.+..|++++.++++|.+. |
T Consensus 210 ~~Fll~~~l~~~~~~~~~~f~--~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~----~ 283 (400)
T PF03825_consen 210 LVFLLAAFLIGISHAAYYTFF--SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVA----Y 283 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH----H
Confidence 345567778888899888886 344776665665554432222223332 246789999999999999987765 5
Q ss_pred HHHHHHhhhccccchHHHHHH-HHHHhcccccc--ccceeeeeecccCCC-CCceehhhHHHh-hhhHHHHHHHHHHHHh
Q 009176 89 GLQYLFLTHTISHLSYAHIFL-LTVLAGNSICW--INTVCYVVTIKNFPF-DRQVAVGITSSY-LGLSAKLYTSAVNAIE 163 (541)
Q Consensus 89 ~~~~l~~~~~i~~~~~w~l~~-~~~l~g~g~~~--~nTa~lvt~v~NFP~-~RG~a~gllk~~-~GLSaaift~i~~~~~ 163 (541)
..=|..+.--..+ +++..++ .+-..-+|-|| +.++++.---++.|+ .|+++.|+.-+. .|+++++=+.+.-.++
T Consensus 284 ~vR~~l~a~~~~~-~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~ 362 (400)
T PF03825_consen 284 AVRWLLYAYFSDP-WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLY 362 (400)
T ss_pred HHHHHHHHHhcCC-cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 5555554442111 1222222 11123344443 345555555589997 589999998874 7999999998887776
No 217
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=92.98 E-value=4.8 Score=44.48 Aligned_cols=117 Identities=13% Similarity=0.090 Sum_probs=82.6
Q ss_pred ccchhhhhhhcccccccccc-cchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHhhhccchhh
Q 009176 373 TSSLVSLSSSFGFFGRLIPS-LFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETNVALYTSTAIIGVCSGAITSIS 451 (541)
Q Consensus 373 ~~~~Vsl~Si~N~~GRl~~G-~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~ 451 (541)
.+.+.++.++-+..+-++.. .+.+.+ +..| .+...+....+..+..++....+.......+..--+.....+
T Consensus 279 ~s~~~~~~~~~~~i~~l~~~~~l~~~l-----~~~~--~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~ 351 (463)
T KOG2816|consen 279 FSDLLSLVSILGIISQLLLLPLLSSIL-----GEKR--LISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAGIVFPAI 351 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhh--HhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcchhHHH
Confidence 45577777777777777744 555443 2223 344444555566667777766554344444444455677888
Q ss_pred HHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCC
Q 009176 452 VTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHN 496 (541)
Q Consensus 452 P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~ 496 (541)
=++++.+=+.+..|.+++++...-.+.+.+.+.+.+.+|-.+.+.
T Consensus 352 ~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~~ 396 (463)
T KOG2816|consen 352 RAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLDD 396 (463)
T ss_pred HhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence 889999999999999999999999999999999999999776653
No 218
>PRK09669 putative symporter YagG; Provisional
Probab=92.60 E-value=0.57 Score=50.53 Aligned_cols=150 Identities=10% Similarity=0.041 Sum_probs=80.9
Q ss_pred hcCC--cccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcc----c---chhHHHHH
Q 009176 368 RGCS--GTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNET----N---VALYTSTA 438 (541)
Q Consensus 368 lg~~--~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~----~---~~l~~~s~ 438 (541)
+|.+ ......++..++..+.-.+.|+++|.. +.|++-.|||.+... ++++++..++.... . ..+++...
T Consensus 40 ~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~-~~r~Grrrp~il~~~-~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~ 117 (444)
T PRK09669 40 FGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRT-RTRHGQFRPYLLWFA-IPFGVVCLLTFYTPDFGATGKIIYACVTYI 117 (444)
T ss_pred cCCCHHHHHHHHHHHHHHHHcccceeeEeeecC-CCCCCCcchhHHHHH-HHHHHHHHHHHhCCCCCcchHHHHHHHHHH
Confidence 4544 345677778888889888988886544 344455678765432 23333333222221 1 12333445
Q ss_pred HHHHhhhccchhhHHHhhhhcCC-Ccccch----hhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHH
Q 009176 439 IIGVCSGAITSISVTTTTELFGT-KNFSVN----HNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFI 513 (541)
Q Consensus 439 liG~~yG~~~~l~P~ivse~FG~-k~fg~n----yg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~ 513 (541)
+.+.+|.....-+-++.+|+.-. |.-+.. ......+..+++.+..++...+-+.+ . ...|+.++.
T Consensus 118 l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~-~---------~~g~~~~~~ 187 (444)
T PRK09669 118 LLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGD-E---------QKGYFYAMM 187 (444)
T ss_pred HHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-h---------hhhHHHHHH
Confidence 66777776665666777777632 333333 33334444444444433333321110 0 123888888
Q ss_pred HHHHHHHHHHHHHHHH
Q 009176 514 LWGSFCLFGTFLALIL 529 (541)
Q Consensus 514 i~~~~~~~g~~lsl~l 529 (541)
+.+.++++..+++++.
T Consensus 188 i~~ii~~v~~~~~~~~ 203 (444)
T PRK09669 188 VMGLLGVVLFFCCFFM 203 (444)
T ss_pred HHHHHHHHHHHHHhCC
Confidence 8888777766655543
No 219
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=92.17 E-value=0.31 Score=45.84 Aligned_cols=141 Identities=13% Similarity=0.134 Sum_probs=80.3
Q ss_pred hHHHHHHHHHHhhcccceeecchHH-----HHhhhcCCcccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHH
Q 009176 339 DFWLYFFVYFSGATLGLVFLNNLGQ-----IAESRGCSGTSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGA 413 (541)
Q Consensus 339 ~Fwllf~~~~~g~g~Glm~I~n~g~-----i~~slg~~~~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~ 413 (541)
-|-.+|..|--.......++.++.. |-+..|+...++.-...++++++. ..+++++ +..|.+++
T Consensus 4 ~f~~~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~---P~iv~~l--------g~K~sm~l 72 (156)
T PF05978_consen 4 GFMFLFTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFA---PSIVNKL--------GPKWSMIL 72 (156)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhH---HHHHHHH--------hhHHHHHH
Confidence 4666676665555444444433222 112234334445555566666542 3333443 34455554
Q ss_pred HHHHHHHHHHHHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHh
Q 009176 414 LMAPMAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVY 490 (541)
Q Consensus 414 ~~~~~~~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iy 490 (541)
..+..++-......+....++.++++.|++.+..|.---..+.+.-=.++.+.|.|+...-...+.++++.+.-.++
T Consensus 73 g~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 73 GSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43333321222223334568999999999999999999999988887777787777655555555555554433333
No 220
>PF13347 MFS_2: MFS/sugar transport protein
Probab=90.82 E-value=1.8 Score=46.32 Aligned_cols=181 Identities=14% Similarity=0.093 Sum_probs=112.7
Q ss_pred hhHHHHHHHHHHH-HhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHH
Q 009176 8 LQWLSLVGAIWLQ-SINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGL 85 (541)
Q Consensus 8 ~rw~~l~as~~v~-~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~ 85 (541)
++|..+..+..++ ++.+..-.+..| -.+..+|.+ .+...+.....++..+ .++.+.+.||++++-+..+|.+...
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y--~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPY--YFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAA 301 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHH--HHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHH
Confidence 4455555555543 444433333333 455666666 4556666677777755 6888999999999999999999999
Q ss_pred HHHHHHHHHhhhccccchHHHHHHHHHHhccccccccc--eeeeeecc------cCCCCCceehhh----HHHhhhhHHH
Q 009176 86 IGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINT--VCYVVTIK------NFPFDRQVAVGI----TSSYLGLSAK 153 (541)
Q Consensus 86 ~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nT--a~lvt~v~------NFP~~RG~a~gl----lk~~~GLSaa 153 (541)
+++...|..-.+ +.|.+.+...+.|.+.+..++ -++.+-+- +-.+..|...|+ .|-..|++++
T Consensus 302 ~~~~~~~~~~~~-----~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~ 376 (428)
T PF13347_consen 302 LGFLLLFFLGPG-----SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGA 376 (428)
T ss_pred HHHHHHHHHHhh-----hHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHH
Confidence 999988877652 347777777777776664442 23333332 222334555443 4666778888
Q ss_pred HHHHHHHHH-hcCCC---CCc-ccchhhhhchhhhHhHhhccceeeee
Q 009176 154 LYTSAVNAI-ETSSP---NKR-AKLYLLFNSIFPLLACVVTSPVVREI 196 (541)
Q Consensus 154 ift~i~~~~-~~~~~---~~d-~~~fLllla~~p~~v~l~~~~~ir~~ 196 (541)
+...+-+.. |.++. +++ ....-.+..++|.+..++.+.+.+-+
T Consensus 377 i~g~~l~~~Gy~~~~~~q~~~~~~~i~~~~~~~p~~~~~~~~i~~~~y 424 (428)
T PF13347_consen 377 IVGLLLALVGYDANAAVQSASALSGIRILFSIVPAIFLLLAIIFMRFY 424 (428)
T ss_pred HHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 777666553 21010 001 22355566678888888887777666
No 221
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=90.77 E-value=0.49 Score=48.93 Aligned_cols=127 Identities=9% Similarity=0.034 Sum_probs=84.8
Q ss_pred ccccchHHHH-H--HhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccch
Q 009176 28 NFPAYSSQLK-Q--LLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLS 103 (541)
Q Consensus 28 ~f~~ys~~lk-~--~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~ 103 (541)
..+.|.+..- + .+|+|.++....-...-.+..+ .+..+.+.||++++..+.++.+...++..+.+.. .+ ...
T Consensus 158 ~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~-~~---~~~ 233 (310)
T TIGR01272 158 SAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT-HG---YVA 233 (310)
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CC---HHH
Confidence 3344444433 2 3699988888774444455545 7899999999999888999999888887555532 21 112
Q ss_pred HHHHHHHHHHhccccccccceeeeeecccCCCCCceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 104 YAHIFLLTVLAGNSICWINTVCYVVTIKNFPFDRQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 104 ~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
.| ..++.|.+.+...-..+....+.+|++.|++.+++ ..-.+.+++...+.-.+.
T Consensus 234 ~~----~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~la 288 (310)
T TIGR01272 234 MW----FVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLA 288 (310)
T ss_pred HH----HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHH
Confidence 23 22244555555555566677799999989998886 555577777777666554
No 222
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=90.76 E-value=22 Score=39.37 Aligned_cols=88 Identities=14% Similarity=0.147 Sum_probs=60.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHhhcc--cc-hhHHHHHHHHHhhhccchhhHHHhhhh-------cCCCcccchhhhhhhhh
Q 009176 406 PSPASIGALMAPMAGAFMLLLNET--NV-ALYTSTAIIGVCSGAITSISVTTTTEL-------FGTKNFSVNHNIVVANI 475 (541)
Q Consensus 406 ~R~~~l~~~~~~~~~~~ll~~~~~--~~-~l~~~s~liG~~yG~~~~l~P~ivse~-------FG~k~fg~nyg~~~~a~ 475 (541)
++...+....++.+++.+++.+.. +. .+++..++.++.+|...++..+.++|. =|.|.=|..|+.+...-
T Consensus 300 gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~ 379 (467)
T COG2211 300 GKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFR 379 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHH
Confidence 555555555565666655444333 23 455566888899999888888888875 38888899999999777
Q ss_pred hhhHHHHHHHHHHHhhhc
Q 009176 476 PIGSFLFGYLAALVYHKE 493 (541)
Q Consensus 476 ~~Gs~l~~~laG~iyD~~ 493 (541)
=+|.-+++.+.|++-+.-
T Consensus 380 K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 380 KLGLALAGFIPGWILGAI 397 (467)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 777777766666665543
No 223
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=90.01 E-value=0.01 Score=63.52 Aligned_cols=133 Identities=17% Similarity=0.073 Sum_probs=90.7
Q ss_pred chhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcc---c-chhHHHHHHHHHhhhccchh
Q 009176 375 SLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNET---N-VALYTSTAIIGVCSGAITSI 450 (541)
Q Consensus 375 ~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~---~-~~l~~~s~liG~~yG~~~~l 450 (541)
...+...+...+|-+++|.+.|. ++|...+.....++.++.++..... + ..+.++-.+.|++.|+...+
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~-------~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~ 122 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADR-------YGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVV 122 (451)
T ss_pred HHHHHHHhhhccccccccccccc-------cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34555566666777777776442 2666666666666666666655554 4 45777779999999999999
Q ss_pred hHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhh--hcCCCCCCCccccccccHHHHHHHHHHHHHHHHHH
Q 009176 451 SVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYH--KEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLA 526 (541)
Q Consensus 451 ~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD--~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~ls 526 (541)
.|..+.|.=..|+=+..-.+..+++.+|..+...+.-.+.+ .+.. +|..+.+.+..+++..+..
T Consensus 123 ~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~------------Wr~~~~~~~~~~l~~~~~~ 188 (451)
T PF00083_consen 123 SPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWG------------WRILLIFGAIPSLLVLLLR 188 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc------------ccccccccccccccccccc
Confidence 99999999999999999999999888887766433211111 1112 6667766666665544433
No 224
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=89.91 E-value=0.23 Score=54.36 Aligned_cols=105 Identities=12% Similarity=0.075 Sum_probs=83.9
Q ss_pred chHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHH
Q 009176 32 YSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLL 110 (541)
Q Consensus 32 ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~ 110 (541)
=-+++++-+|++-+..-.|.+..+++--+ +++.|++.||+-+.-++.+|...-...=+..-.. -.+||+.++
T Consensus 55 v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs-------~~Fwq~~l~ 127 (493)
T KOG1330|consen 55 VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS-------NHFWQVLLC 127 (493)
T ss_pred hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH-------HHHHHHHHH
Confidence 45688999999999999999999999844 9999999999998888888876554433332211 358999999
Q ss_pred HHHhccccccccceeeeeecccCCC-CCceehhh
Q 009176 111 TVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGI 143 (541)
Q Consensus 111 ~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gl 143 (541)
=.+.|.|..-.++.+----.-+||+ +|+++.|+
T Consensus 128 R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~i 161 (493)
T KOG1330|consen 128 RGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGI 161 (493)
T ss_pred HHHhccchhhhcccchhHhhhcCcchhhhHHHHH
Confidence 8899999987777776666699998 69887764
No 225
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.25 E-value=0.24 Score=54.47 Aligned_cols=181 Identities=19% Similarity=0.168 Sum_probs=122.3
Q ss_pred hHHHHHHHHHHHHhcCCccccccchHHHHHHhCCC--hhhHHHH-HHhhhhhccc-chhhhhhccc---cchHHHHHHHH
Q 009176 9 QWLSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLS--QLQLNNL-AFASDAGKLF-GWISGVASVY---LPLWLVLLIGS 81 (541)
Q Consensus 9 rw~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~s--q~~l~~l-~~~~~~G~~~-G~~~Gll~d~---~pp~~vlliGa 81 (541)
+++.+.+=+.+-...=+.|-.++|-..++-..+.+ -..+..+ ++.--+|..+ |++.+.+.+| +|.+...++|.
T Consensus 240 ~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~ 319 (461)
T KOG3098|consen 240 PKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGI 319 (461)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHH
Confidence 33443333333444445666778888777653333 3333333 2333456654 7788888654 67899999999
Q ss_pred HHHHHHHHHHHHHhhhcccc-----------chHHHHHHHHHHhccccccccceeeeeecccCCCCCceehhhHHHhhhh
Q 009176 82 TLGLIGYGLQYLFLTHTISH-----------LSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPFDRQVAVGITSSYLGL 150 (541)
Q Consensus 82 ~~~~~GY~~~~l~~~~~i~~-----------~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~RG~a~gllk~~~GL 150 (541)
+....++.++.+.+....|- +.+-+..++-++.|.+.+-.||..++.+-.-+|+.|-.+-.+.|-|.++
T Consensus 320 ~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~ 399 (461)
T KOG3098|consen 320 IIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSV 399 (461)
T ss_pred HHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 99999999999988765420 1244556667889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHhHhhccceeeee
Q 009176 151 SAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLACVVTSPVVREI 196 (541)
Q Consensus 151 Saaift~i~~~~~~~~~~~d~~~fLllla~~p~~v~l~~~~~ir~~ 196 (541)
.+++-...+.... ...+.+.+.+......+++...++..
T Consensus 400 ~s~v~~f~~~~~~-------l~~~~l~~~i~~~i~~~~~~~~~~~~ 438 (461)
T KOG3098|consen 400 ASCVAFFFSPYLL-------LYIYTLGLPIFCVIATTIFFIVAERT 438 (461)
T ss_pred HHHHHhhhhhhhH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9877554443221 34455555555555555554444433
No 226
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=89.08 E-value=4.3 Score=45.08 Aligned_cols=137 Identities=18% Similarity=0.122 Sum_probs=92.6
Q ss_pred CccchhHHHHHHHHHHHHhcCCc---cccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccch-HHHHH
Q 009176 4 NSNILQWLSLVGAIWLQSINGTN---SNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPL-WLVLL 78 (541)
Q Consensus 4 ~~~~~rw~~l~as~~v~~~~Gt~---Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp-~~vll 78 (541)
+....+|.++.-+...+...+.. |.=+.|.--.|-..+-+++..-.+--+..+|-.+ -+.-|.=..|.+. +..+.
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli 106 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI 106 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHH
Confidence 34567788777777776555543 3445555555555677777777777777788754 7777887888773 66688
Q ss_pred HHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeec--ccCCCCCceehhhH
Q 009176 79 IGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTI--KNFPFDRQVAVGIT 144 (541)
Q Consensus 79 iGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v--~NFP~~RG~a~gll 144 (541)
+|.+..++|- ++|+++..+-.. .-|+|-+.=++.|.|.+ |.+.+-+.+ ++.|++|-+|.+..
T Consensus 107 ~s~ii~~~g~-llY~~l~~~~~~-~~y~mL~~R~l~Gvg~~--n~a~lR~Y~a~~s~~~dR~rA~a~~ 170 (488)
T KOG2325|consen 107 VSFLIAIIGN-LLYLALAYVPNG-VKYLMLVARILTGVGVG--NFAVLRAYIADASTVEDRPRAFAAT 170 (488)
T ss_pred HHHHHHHHHH-HHHHHHHhcccc-hHHHHHHHHHHcCcCcc--cHHHHHHHHHhccCccchHHHHHHh
Confidence 9999999995 567677776432 44666666667777755 456665554 77999998877643
No 227
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=89.08 E-value=3.3 Score=46.02 Aligned_cols=172 Identities=16% Similarity=0.138 Sum_probs=105.6
Q ss_pred HHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhc-ccchhhhhhccccchHHHHHHHHHHHHHHHHH
Q 009176 12 SLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGK-LFGWISGVASVYLPLWLVLLIGSTLGLIGYGL 90 (541)
Q Consensus 12 ~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~-~~G~~~Gll~d~~pp~~vlliGa~~~~~GY~~ 90 (541)
..++-...|..+|.+= =..||..+=++-|+++.+...+.++..+=. ..-+.+.++.||.|+|..++++...+.+--..
T Consensus 273 i~~~v~~~qq~sGi~a-i~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~ 351 (485)
T KOG0569|consen 273 IGIVVSFAQQFSGINA-IFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLL 351 (485)
T ss_pred HHHHHHHHHHhcCcce-eHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 3333444455666544 457999999999999998888877777666 44889999999999999998888777654322
Q ss_pred H--HHHhhhccccchHH---HHHHHHHHhccccccccceeeeeecccCCC-CCceehhhHHHhhhhHHHHHHHHHHHHhc
Q 009176 91 Q--YLFLTHTISHLSYA---HIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQVAVGITSSYLGLSAKLYTSAVNAIET 164 (541)
Q Consensus 91 ~--~l~~~~~i~~~~~w---~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~a~gllk~~~GLSaaift~i~~~~~~ 164 (541)
+ -+...+... ...| ..|++++...++.+ .+-.+..-...=||. .|.+|.+......=++..+-...|--+.
T Consensus 352 ~~~~~~l~~~~~-~~~~y~~i~~~~~~~~~f~~G-~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~- 428 (485)
T KOG0569|consen 352 MSIALFLSNSFG-SWLSYLCIAAIFLFIISFAIG-PGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQ- 428 (485)
T ss_pred HHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhhcC-CCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 2 222222221 1112 12333333333222 112233444467876 7999999988888888777766665554
Q ss_pred CCCCCcccchhhhhchhhhHhHhhccc
Q 009176 165 SSPNKRAKLYLLFNSIFPLLACVVTSP 191 (541)
Q Consensus 165 ~~~~~d~~~fLllla~~p~~v~l~~~~ 191 (541)
+--+.|.+++=..|.+++.+..+
T Consensus 429 ----~~~g~~~filF~i~~~~~~i~~~ 451 (485)
T KOG0569|consen 429 ----NVIGPYVFILFVIPLAIFLIYLY 451 (485)
T ss_pred ----HHhcchhhHHHHHHHHHHHHHHH
Confidence 22233555555556655554443
No 228
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=88.15 E-value=1.3 Score=48.02 Aligned_cols=131 Identities=24% Similarity=0.157 Sum_probs=84.2
Q ss_pred cccchH-HHHHHhCCChhhHHHHHHhhh-hhcccchhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHH
Q 009176 29 FPAYSS-QLKQLLSLSQLQLNNLAFASD-AGKLFGWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAH 106 (541)
Q Consensus 29 f~~ys~-~lk~~l~~sq~~l~~l~~~~~-~G~~~G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~ 106 (541)
||.|=| -+|+.+++|..+-..++...- +|.-.=..+|.+.||++++-++++--+.+.++=+..-..-++.-..++.+.
T Consensus 237 fs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~ 316 (417)
T COG2223 237 FSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVV 316 (417)
T ss_pred HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHH
Confidence 344433 368999999999877766655 555668899999999986655554444444333333333322211122222
Q ss_pred ----HHHHHHHhccccccccceeeeeecccCCCCCceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 107 ----IFLLTVLAGNSICWINTVCYVVTIKNFPFDRQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 107 ----l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
+....+..|.|.. +++.--=+-||++-|.|+|+.-+.=||.|.+.-+.....+
T Consensus 317 ~~~~~l~l~~~~G~GnG----svfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~ 373 (417)
T COG2223 317 FVAVFLALFVFAGLGNG----SVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSL 373 (417)
T ss_pred HHHHHHHHHHHhccCcc----hheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHH
Confidence 1222233344444 6667777889999999999999999999988888777766
No 229
>PRK03612 spermidine synthase; Provisional
Probab=88.05 E-value=4.4 Score=45.44 Aligned_cols=58 Identities=17% Similarity=0.258 Sum_probs=43.3
Q ss_pred hHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhh
Q 009176 433 LYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYH 491 (541)
Q Consensus 433 l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD 491 (541)
++....+.+++-|+.+++.--+..+. ..++.|.+-|-++.+..+|+.+++.++|.+-=
T Consensus 113 ~~~~~~~~~~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 113 LYVLVLLIGLLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 45566788999999887777766543 33567788888888888999998888876653
No 230
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=87.07 E-value=0.83 Score=51.03 Aligned_cols=180 Identities=19% Similarity=0.236 Sum_probs=112.9
Q ss_pred hhhhchhHHHH-HHHHHHhhcccceeecchHHH-HhhhcCCcccchhhhhhhcccccccccccch-hhhcccCCCCChhH
Q 009176 333 LMLQRVDFWLY-FFVYFSGATLGLVFLNNLGQI-AESRGCSGTSSLVSLSSSFGFFGRLIPSLFG-YFFSRSKHMIPSPA 409 (541)
Q Consensus 333 q~l~~~~Fwll-f~~~~~g~g~Glm~I~n~g~i-~~slg~~~~~~~Vsl~Si~N~~GRl~~G~~s-~~~~~~~~~~~R~~ 409 (541)
+++.+++--++ |++.+.|.|.|+..- -+ .. .|..+ ...++-++.++-|..|-+..=+.+ +++ + ++++..
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~t-FL-fWHled~~--~~~~LfGv~~a~~~~gEI~~~ffs~klI-~---kiGHv~ 437 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFT-FL-FWHLEDLG--GIKTLFGVVSALCHAGEILFYFFSFKLI-E---KIGHVN 437 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHH-HH-HHHHhhcC--CcceeeeehhhhhccchHHHHHHHHHHH-H---Hhcccc
Confidence 56666655443 444555555554321 00 00 11111 344555577777888887744443 443 3 347777
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhHH-HHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhh-hhhhhHHHHHHHHH
Q 009176 410 SIGALMAPMAGAFMLLLNETNVALYT-STAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVA-NIPIGSFLFGYLAA 487 (541)
Q Consensus 410 ~l~~~~~~~~~~~ll~~~~~~~~l~~-~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~-a~~~Gs~l~~~laG 487 (541)
.+...+....+=++.+....+.+..+ .=.+=|+++|.+|..+-+.+++.=-++-=.+..+++.. -.++|==++..++|
T Consensus 438 v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG 517 (618)
T KOG3762|consen 438 VMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGG 517 (618)
T ss_pred eeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhh
Confidence 66655555555566666655544333 55788999999999999999999888877777777652 22344444445566
Q ss_pred HHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009176 488 LVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYART 533 (541)
Q Consensus 488 ~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~ 533 (541)
.+..+-+. +.+|.+.++.|++.+++-..+.++-
T Consensus 518 ~~v~~fg~-------------~ttf~~~giAcl~~l~~~~~iq~~l 550 (618)
T KOG3762|consen 518 FVVERFGA-------------RTTFRIFGIACLVTLALFISIQLLL 550 (618)
T ss_pred hhheeehh-------------HHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 66666665 8999999999988888777765443
No 231
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=86.94 E-value=7.4 Score=39.48 Aligned_cols=141 Identities=13% Similarity=0.119 Sum_probs=74.5
Q ss_pred HHHHHHhhcccceeecch--HHHHhhhcCCccc--chhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHH
Q 009176 344 FFVYFSGATLGLVFLNNL--GQIAESRGCSGTS--SLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMA 419 (541)
Q Consensus 344 f~~~~~g~g~Glm~I~n~--g~i~~slg~~~~~--~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~ 419 (541)
.....+...+|..|.... .|+-+.+|+++.. ..-..-.+...+| +.+|.+-|.. -||...+. ..+...
T Consensus 6 ~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~------gp~~~l~i-G~~~~~ 77 (250)
T PF06813_consen 6 VASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF------GPWVVLLI-GAVLGF 77 (250)
T ss_pred HHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc------chHHHHHH-HHHHHH
Confidence 334445556776666533 5555677886431 2222222333344 4567773321 15554443 333344
Q ss_pred HHHHHHh--hcc--c-chhHHHH---HHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhh
Q 009176 420 GAFMLLL--NET--N-VALYTST---AIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYH 491 (541)
Q Consensus 420 ~~~ll~~--~~~--~-~~l~~~s---~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD 491 (541)
++...+. ... + ..++..+ .+.|.+-+...+..-....+.| ++|=|+-=|++-...++++-++..+...+++
T Consensus 78 ~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NF-P~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 78 VGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNF-PRSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhC-ccccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 4544332 111 1 1222222 3333332222233334445788 4688999999999999999999888888886
Q ss_pred hc
Q 009176 492 KE 493 (541)
Q Consensus 492 ~~ 493 (541)
.+
T Consensus 157 ~~ 158 (250)
T PF06813_consen 157 DD 158 (250)
T ss_pred CC
Confidence 64
No 232
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=86.65 E-value=6.9 Score=41.99 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=74.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHH
Q 009176 404 MIPSPASIGALMAPMAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFG 483 (541)
Q Consensus 404 ~~~R~~~l~~~~~~~~~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~ 483 (541)
+.-|..+ ..+++.+++.++=.......|+.++.++|.+-+..-.+.|+++-+.|+ |+-+..=|+-.++-.+|+-+.+
T Consensus 75 g~er~l~--~~Llli~~G~~iR~~~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa 151 (395)
T COG2807 75 GEERSLF--LALLLIAAGILIRSLGGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAA 151 (395)
T ss_pred hhHHHHH--HHHHHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHh
Confidence 3344443 344444555443333333579999999999999999999999999986 5566666666666666665554
Q ss_pred HHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHH
Q 009176 484 YLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALI 528 (541)
Q Consensus 484 ~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~ 528 (541)
-++-.+-....+ .+.+...++..++++.++=+.
T Consensus 152 ~lavpla~~~~g------------W~~aL~~WAl~allAl~~WlP 184 (395)
T COG2807 152 ALAVPLAQHSGG------------WRGALGFWALLALLALLIWLP 184 (395)
T ss_pred hhhhHHHHhhcc------------HHHHHHHHHHHHHHHHHHHhh
Confidence 444444444444 899999999999888755443
No 233
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=86.59 E-value=1.6 Score=47.50 Aligned_cols=166 Identities=13% Similarity=0.181 Sum_probs=84.9
Q ss_pred hhchhHHHH---HHHHHHhhcccceeecchHHHHhhhcCC--cccchhhhhhhcccccccccccc-hhhhcccCCCCChh
Q 009176 335 LQRVDFWLY---FFVYFSGATLGLVFLNNLGQIAESRGCS--GTSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSP 408 (541)
Q Consensus 335 l~~~~Fwll---f~~~~~g~g~Glm~I~n~g~i~~slg~~--~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~ 408 (541)
.|+.+||.+ ++.+++..|+=+.+.. --..|..|++ +..+..|..++...+.-.+.|++ |++. .+|.
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~--iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg------~kK~ 75 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFP--IWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLG------LKKH 75 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCT------TCSH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHH--HHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhh------hhHH
Confidence 456777744 4444554444222210 0011235554 44556666666555555566777 5543 2344
Q ss_pred HHHHHHHHH-HHHHHHHHhhcc--cchhHH----HHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHH
Q 009176 409 ASIGALMAP-MAGAFMLLLNET--NVALYT----STAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFL 481 (541)
Q Consensus 409 ~~l~~~~~~-~~~~~ll~~~~~--~~~l~~----~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l 481 (541)
....+..+. ....++...+.. ...+++ +.+.+|++|.+..++.=+.+.+. .|..+..||=.=+--.+|-.+
T Consensus 76 Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~--sr~~~feYG~~R~wGSig~ai 153 (412)
T PF01306_consen 76 LLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERV--SRRNGFEYGRARMWGSIGFAI 153 (412)
T ss_dssp HHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHH--HHHHSS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH--HHHhcCCcchHHHHhhHHHHH
Confidence 332222222 222233322211 112333 33445666777777776666555 455666788777777777777
Q ss_pred HHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHH
Q 009176 482 FGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTF 524 (541)
Q Consensus 482 ~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~ 524 (541)
...++|++++.+ -+..|++..+..++-++
T Consensus 154 ~s~~~G~L~~i~--------------p~~~fwi~s~~~~il~l 182 (412)
T PF01306_consen 154 ASLLAGILFNIN--------------PNIIFWIASAAAIILLL 182 (412)
T ss_dssp HHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHhheeeeeC--------------ccHHHHHHHHHHHHHHH
Confidence 788899999864 36778876554443333
No 234
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=85.60 E-value=1.1 Score=49.58 Aligned_cols=121 Identities=17% Similarity=0.081 Sum_probs=77.8
Q ss_pred HHHHhCCChhhHH-HHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHH
Q 009176 36 LKQLLSLSQLQLN-NLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVL 113 (541)
Q Consensus 36 lk~~l~~sq~~l~-~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l 113 (541)
+|.+++.|+++.. .++++.-++.-- =+.-+++.-..+-+-++.+|..+.+.++.+...+-.. |+++....+
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~-------w~~~~~~v~ 340 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATET-------WMMFAAGVV 340 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccc-------hhhhHHHHH
Confidence 7899999999999 555555555422 2222355555665568889998888887665433222 666665555
Q ss_pred hccccccccceeeeeecccCCCCCceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 114 AGNSICWINTVCYVVTIKNFPFDRQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 114 ~g~g~~~~nTa~lvt~v~NFP~~RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
.+.+..-.=...-..+.-..|+.||++.++.-+.-||++-+-+.+|..++
T Consensus 341 ~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 341 VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 54444322222333444677899999999999888877766666655554
No 235
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=85.11 E-value=7.7 Score=36.86 Aligned_cols=131 Identities=18% Similarity=0.120 Sum_probs=80.8
Q ss_pred cchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc---chhHHHHHHHHHhhhccchh
Q 009176 374 SSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN---VALYTSTAIIGVCSGAITSI 450 (541)
Q Consensus 374 ~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~---~~l~~~s~liG~~yG~~~~l 450 (541)
....+...+...++.+..|.+.|.. +|...+.........+.++.....+ ..+.+...+.|+..|...+.
T Consensus 42 ~~~~~~~~~~~~~~~~~~g~l~d~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 114 (338)
T COG0477 42 GLLLSAFFLGYAIGSLLAGPLGDRY-------GRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPV 114 (338)
T ss_pred HHHHHHHHHHHHHHhhhhhhccccc-------cchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHH
Confidence 4455556666666667777774432 2222222222212222222222222 33555555689999999999
Q ss_pred hHHHhhhhcCC-Ccccchhhhhhh-hhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHH
Q 009176 451 SVTTTTELFGT-KNFSVNHNIVVA-NIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFG 522 (541)
Q Consensus 451 ~P~ivse~FG~-k~fg~nyg~~~~-a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g 522 (541)
..++++|.+.. ++.+...+.... ...+|..+++.+++.+.+. .. ..++..|.+........
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 115 ASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-LL----------WGWRAAFLLAALLGLLL 177 (338)
T ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh----------cchHHHHHHHHHHHHHH
Confidence 99999999988 678888888887 5777777778788888776 21 22677666665554333
No 236
>PRK10429 melibiose:sodium symporter; Provisional
Probab=84.97 E-value=6.7 Score=42.81 Aligned_cols=107 Identities=9% Similarity=-0.006 Sum_probs=53.9
Q ss_pred cchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcc--c-c----hhHHHHHHHHHhhhc
Q 009176 374 SSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNET--N-V----ALYTSTAIIGVCSGA 446 (541)
Q Consensus 374 ~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~--~-~----~l~~~s~liG~~yG~ 446 (541)
....++..++..+.-.+.|.++|.. |.|++-.|||.+... +++++++.++.... + . .+.+..++.+++|-.
T Consensus 45 g~i~~i~ri~dai~dp~~G~lsD~t-~sr~Grrrp~il~g~-i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~ 122 (473)
T PRK10429 45 GTLFLVARIWDAINDPIMGWIVNNT-RSRWGKFKPWILIGT-LANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTI 122 (473)
T ss_pred HHHHHHHHHHHHHhhchheeehhcC-CCCCCCcchhHhhhh-HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 3455566777777777788886654 455566678876543 44455543333221 1 1 222333455666655
Q ss_pred cchhhHHHhhhhc-CCCcccchhhhhhhhhhhhHHHH
Q 009176 447 ITSISVTTTTELF-GTKNFSVNHNIVVANIPIGSFLF 482 (541)
Q Consensus 447 ~~~l~P~ivse~F-G~k~fg~nyg~~~~a~~~Gs~l~ 482 (541)
...-+-++.+|+= ..+.=....++-.....+|+++.
T Consensus 123 ~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~ 159 (473)
T PRK10429 123 MDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVT 159 (473)
T ss_pred HcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555553 23333333444333333444443
No 237
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=84.92 E-value=2.7 Score=46.56 Aligned_cols=131 Identities=16% Similarity=0.076 Sum_probs=85.1
Q ss_pred cCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchH--HHHHHHH----HHHHHHHHHHHHHh
Q 009176 23 NGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLW--LVLLIGS----TLGLIGYGLQYLFL 95 (541)
Q Consensus 23 ~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~--~vlliGa----~~~~~GY~~~~l~~ 95 (541)
.|-+-..+.-.-=.++.+|+|++|+..+++..++-..+ .++.|.+.||++|+ .++.++. +..+.|+..++...
T Consensus 295 dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~ 374 (477)
T PF11700_consen 295 DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSF 374 (477)
T ss_pred HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 34333444444445678999999999999999998866 78999999999999 5554443 34445666555553
Q ss_pred hhccccchHHHHHHHHHHhccccccccceeeeeecccCCCCCceehhhHHHhhhhHHHHHHHHH
Q 009176 96 THTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPFDRQVAVGITSSYLGLSAKLYTSAV 159 (541)
Q Consensus 96 ~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~RG~a~gllk~~~GLSaaift~i~ 159 (541)
.| .-+-|.++++.++.|...+..++++=..=.+-=|+.|- +-.-|++++++..-+.+-
T Consensus 375 ~g---~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e---~efFgly~i~gk~ss~lG 432 (477)
T PF11700_consen 375 FG---LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGRE---AEFFGLYAITGKASSWLG 432 (477)
T ss_pred cC---cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchh---hHHHHHHHHHHHHHHHHH
Confidence 33 23457777887888887776555544333344466443 555556666665544443
No 238
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=82.09 E-value=13 Score=40.45 Aligned_cols=64 Identities=14% Similarity=0.171 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhh
Q 009176 409 ASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVV 472 (541)
Q Consensus 409 ~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~ 472 (541)
+.+.+..++.++.++++....+ ...|++-++.+.+|-...++.-.-++..--.+.|+-.+|+=+
T Consensus 318 l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNt 382 (412)
T PF01770_consen 318 LALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINT 382 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHH
Confidence 3444455556666666666666 357888889999999888888888887777777777776633
No 239
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=80.67 E-value=19 Score=39.55 Aligned_cols=87 Identities=16% Similarity=0.094 Sum_probs=46.1
Q ss_pred hhccccchHHHHHHHHHHHHHHHHHHHHHhhhcccc-chHHHHHHHHHHhccccccccceeeeeecccCCCCCceehhhH
Q 009176 66 VASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISH-LSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPFDRQVAVGIT 144 (541)
Q Consensus 66 ll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~-~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~RG~a~gll 144 (541)
.+.-+.|.+.=+..+-+...+........+....+. ..+|..++..++.|.+++. ...++..=+..||++ -++-.
T Consensus 67 ~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~-~q~s~~gla~~fp~~---~~~a~ 142 (437)
T TIGR00939 67 FLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMAL-LQGSLFGLAGVFPST---YSSAV 142 (437)
T ss_pred HHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhh-hcccchhhcccCCHH---HHHHH
Confidence 444445653333444444444433333323322222 3588888888888888764 445566666789964 23333
Q ss_pred HHhhhhHHHHHH
Q 009176 145 SSYLGLSAKLYT 156 (541)
Q Consensus 145 k~~~GLSaaift 156 (541)
....|+||.+=+
T Consensus 143 ~~G~g~aGv~~s 154 (437)
T TIGR00939 143 MSGQGLAGVLTS 154 (437)
T ss_pred HhcchhHHHHHH
Confidence 444566665533
No 240
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=79.44 E-value=1.4 Score=47.86 Aligned_cols=118 Identities=19% Similarity=0.138 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHH
Q 009176 11 LSLVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYG 89 (541)
Q Consensus 11 ~~l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~ 89 (541)
+-|+|.+..+-.-.|.-.++ .-=-|+.+|++|.|+-.++++.++...+ +++.|.+.||++++.++.+|-+....-
T Consensus 256 ~FLiA~~~~~DGv~til~~~--~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~-- 331 (438)
T COG2270 256 LFLIARFFYIDGVNTILAMG--GVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIA-- 331 (438)
T ss_pred HHHHHHHHHHhhHHHHHHHH--HHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHH--
Confidence 33445444443333333332 1112569999999999999999999865 999999999999998888877665543
Q ss_pred HHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCCCC
Q 009176 90 LQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPFDR 137 (541)
Q Consensus 90 ~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~~R 137 (541)
.++....+. ...+|.+ -.+.|.+++-....+=.-=.|+.|+.|
T Consensus 332 ~~~~~~~~~--~~~f~i~---gll~g~s~G~~qA~SRSy~~~lvp~~k 374 (438)
T COG2270 332 ALYLIFLEG--ELDFWIL---GLLVGTSLGGAQASSRSYLARLVPKGK 374 (438)
T ss_pred HHHHHHccc--cHHHHHH---HHHHHHhcchHHHHHHHHHHHhCCCcc
Confidence 233333332 3457754 233444444333333333347888755
No 241
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=79.30 E-value=9.3 Score=41.48 Aligned_cols=155 Identities=16% Similarity=0.069 Sum_probs=103.6
Q ss_pred ccchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHh-hc--ccchhH-HHHHHHHHhhhccc
Q 009176 373 TSSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLL-NE--TNVALY-TSTAIIGVCSGAIT 448 (541)
Q Consensus 373 ~~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~-~~--~~~~l~-~~s~liG~~yG~~~ 448 (541)
.....|++-.+-+.|-...+....++.|| +++..-+...+.+++++..++. .. .+..++ .+-.++|.+-|..=
T Consensus 46 s~~~a~liqfaff~gYf~~~lpa~~~~kk---~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~Le 122 (422)
T COG0738 46 TYFEASLIQFAFFGGYFIMSLPAGLLIKK---LGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLE 122 (422)
T ss_pred cHHHHHHHHHHHHHHHHHHhccHHHHHHH---hhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHH
Confidence 44566777777777777766665555443 3666666667777888766553 22 233333 34467888888888
Q ss_pred hhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCC-CC---Cccccc-cc-cHHHHHHHHHHHHHH
Q 009176 449 SISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNA-HN---GKCMGM-AC-YRSTFILWGSFCLFG 522 (541)
Q Consensus 449 ~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~-~~---~~C~G~-~C-Y~~tF~i~~~~~~~g 522 (541)
+..=+.++.+.-.++=+..=|++..-+++|+.++|.+.+++-+++.... ++ ..=.+. .| .+..|++++..+++-
T Consensus 123 taaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll 202 (422)
T COG0738 123 TAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLL 202 (422)
T ss_pred hccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 8888999999888888889999999999999999999999988531100 00 000111 12 577788887777665
Q ss_pred HHHHHHHH
Q 009176 523 TFLALILY 530 (541)
Q Consensus 523 ~~lsl~l~ 530 (541)
.+.....+
T Consensus 203 ~v~~~~~k 210 (422)
T COG0738 203 AVLILLSK 210 (422)
T ss_pred HHHHHhcc
Confidence 55544443
No 242
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=79.14 E-value=2.8 Score=46.45 Aligned_cols=60 Identities=18% Similarity=0.102 Sum_probs=46.6
Q ss_pred HHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhcccc-chHHHHHHHHHHHHHHHHHHHHH
Q 009176 35 QLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYL-PLWLVLLIGSTLGLIGYGLQYLF 94 (541)
Q Consensus 35 ~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~-pp~~vlliGa~~~~~GY~~~~l~ 94 (541)
|+++.||+||++-..+--+-.-=.++ -+++|++.||+ |.+-++.+|++...+||.++-..
T Consensus 51 ~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~ 112 (498)
T COG3104 51 QLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAIS 112 (498)
T ss_pred hccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcc
Confidence 44445889999877554333333344 89999999994 99999999999999999987655
No 243
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=76.65 E-value=15 Score=40.05 Aligned_cols=132 Identities=12% Similarity=0.005 Sum_probs=78.0
Q ss_pred ccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHh-hcc---c-chhHHHHHHHHHhhhccchhhHHHhhhhcC
Q 009176 386 FGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLL-NET---N-VALYTSTAIIGVCSGAITSISVTTTTELFG 460 (541)
Q Consensus 386 ~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~-~~~---~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG 460 (541)
.-+.+.|.++|...-. +..|.+.+.+..++.+++.+.++ .+. + ....+...+.-+++-..=-+.=+.++|.=-
T Consensus 39 ~~Kp~~g~lsD~~pi~--G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~ 116 (433)
T PF03092_consen 39 SIKPLYGLLSDSFPIF--GYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELAR 116 (433)
T ss_pred HHhhhHHhhccccccc--CCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Confidence 4567789998876322 34555555444444333222222 222 1 223334445555555555566667777641
Q ss_pred CC--cccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhh
Q 009176 461 TK--NFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYAR 532 (541)
Q Consensus 461 ~k--~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r 532 (541)
.+ .-|.+-........+|++++..+.|.++|... ++..|.+.+.+..+..+.++.+...
T Consensus 117 ~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-------------~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 117 REPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-------------PQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-------------CeEEehHHHHHHHHHHHHHHHhhhh
Confidence 11 12344445555566888888888999998765 5778888888888887777777553
No 244
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=75.34 E-value=31 Score=37.48 Aligned_cols=108 Identities=11% Similarity=-0.086 Sum_probs=68.1
Q ss_pred cccccccchhhhcccCCCCChhHHHHHHHHH-------HHHHHHHHhh-----cccc-----hhHHHHHHHHHhhhccch
Q 009176 387 GRLIPSLFGYFFSRSKHMIPSPASIGALMAP-------MAGAFMLLLN-----ETNV-----ALYTSTAIIGVCSGAITS 449 (541)
Q Consensus 387 GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~-------~~~~~ll~~~-----~~~~-----~l~~~s~liG~~yG~~~~ 449 (541)
-|...|..||.. ++-++..|.-++..-.++ +..+.+.+.. ..+. ...++..++|++.+..-+
T Consensus 30 ~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T 108 (403)
T PF03209_consen 30 LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGT 108 (403)
T ss_pred HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHH
Confidence 499999998874 212344555433322222 2222222222 0021 244456788888888888
Q ss_pred hhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCC
Q 009176 450 ISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGH 495 (541)
Q Consensus 450 l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~ 495 (541)
.+-++.+|.=..|+=+.-=+++..---+|-.+...++|++-|....
T Consensus 109 ~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~ 154 (403)
T PF03209_consen 109 SFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP 154 (403)
T ss_pred HHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 8999999999998888777776666667777777778888776443
No 245
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=73.88 E-value=6.3 Score=41.99 Aligned_cols=89 Identities=25% Similarity=0.232 Sum_probs=63.5
Q ss_pred HHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhc-ccchhhhhhccccchHHHHHHHHHHHHHHHHHHH
Q 009176 14 VGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGK-LFGWISGVASVYLPLWLVLLIGSTLGLIGYGLQY 92 (541)
Q Consensus 14 ~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~-~~G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~ 92 (541)
.++=|+| ..|.|..|. ++|++.+|++.+=+++-.-. .+|.+.|.+.|++|+|..+++-+++..+.-.
T Consensus 47 ~~aDWLQ----GpY~Y~LY~-----~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl--- 114 (354)
T PF05631_consen 47 MAADWLQ----GPYLYALYE-----SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL--- 114 (354)
T ss_pred HHHHHhh----cchhHHHHH-----HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH---
Confidence 3444555 578888883 59999999999988888777 4599999999999999988876666555542
Q ss_pred HHhhhccccchHHHHHHHHHHhccccc
Q 009176 93 LFLTHTISHLSYAHIFLLTVLAGNSIC 119 (541)
Q Consensus 93 l~~~~~i~~~~~w~l~~~~~l~g~g~~ 119 (541)
+.+.+ .++.+.+-=.++|.+.+
T Consensus 115 ---~k~~~--~~~~L~~GRvlgGiaTS 136 (354)
T PF05631_consen 115 ---TKHSS--NYPVLLLGRVLGGIATS 136 (354)
T ss_pred ---HHhcc--ccHHHHHHHHHHHHHHH
Confidence 34332 35656655555555443
No 246
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=67.93 E-value=31 Score=38.28 Aligned_cols=145 Identities=12% Similarity=0.094 Sum_probs=72.5
Q ss_pred chhhhhhhcccccccccccc-hhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcc-----c-chhHHHHHHHHHhhhcc
Q 009176 375 SLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNET-----N-VALYTSTAIIGVCSGAI 447 (541)
Q Consensus 375 ~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~-----~-~~l~~~s~liG~~yG~~ 447 (541)
....+.-++..+---+-|.+ |+. |+||+--|||.+....-...++.+++..++ . ...++.=.+.+++|-..
T Consensus 52 ~iflv~RiiDAi~DP~~G~i~D~t--~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~v 129 (467)
T COG2211 52 TIFLVARIIDAITDPIMGFIVDRT--RSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLV 129 (467)
T ss_pred HHHHHHHHHHHHhcchheeeeccc--ccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHhe
Confidence 34445566666766776766 554 466677899987765544444444433331 1 12444456788888774
Q ss_pred ----chhhHHHhhhhcCCCcc--cchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHH
Q 009176 448 ----TSISVTTTTELFGTKNF--SVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLF 521 (541)
Q Consensus 448 ----~~l~P~ivse~FG~k~f--g~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~ 521 (541)
.++.|.++.|- ..|.- +.-..+-..+..+-+++.+++...+-+.+..+ =|+.+ ...++++
T Consensus 130 niPy~al~~~iT~d~-~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~----------g~~~~---~~~~~vi 195 (467)
T COG2211 130 NIPYGALGPEITQDP-QERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKAL----------GYQGT---ALVLGVI 195 (467)
T ss_pred eCchhhcchhhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchh----------hHHHH---HHHHHHH
Confidence 44555555543 11111 11122222333344455555555443332110 04333 3344555
Q ss_pred HHHHHHHHHhhhhc
Q 009176 522 GTFLALILYARTRK 535 (541)
Q Consensus 522 g~~lsl~l~~r~r~ 535 (541)
+.+..++..+.+|+
T Consensus 196 ~~i~~l~~~~~v~E 209 (467)
T COG2211 196 GVILLLFCFFNVKE 209 (467)
T ss_pred HHHHHHHHHHHhhc
Confidence 55555555566664
No 247
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=67.59 E-value=12 Score=43.32 Aligned_cols=59 Identities=15% Similarity=0.048 Sum_probs=48.1
Q ss_pred HHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccc-cchHHHHHHHHHHHHHHHHHHHHH
Q 009176 36 LKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVY-LPLWLVLLIGSTLGLIGYGLQYLF 94 (541)
Q Consensus 36 lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~-~pp~~vlliGa~~~~~GY~~~~l~ 94 (541)
+.+.+|+++++...+-.+...-.++ ++++|.+.|+ +|+...+++|++...+|+.++...
T Consensus 14 l~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~ 74 (654)
T TIGR00926 14 FLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFG 74 (654)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 4557899999887765555544554 9999999999 599999999999999999888753
No 248
>PRK11462 putative transporter; Provisional
Probab=66.65 E-value=38 Score=36.94 Aligned_cols=107 Identities=7% Similarity=-0.036 Sum_probs=50.8
Q ss_pred chhhhhhhcccccccccccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhcc---c-c-h--hHHHHHHHHHhhhcc
Q 009176 375 SLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNET---N-V-A--LYTSTAIIGVCSGAI 447 (541)
Q Consensus 375 ~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~---~-~-~--l~~~s~liG~~yG~~ 447 (541)
....+--+|..+--.+-|.++|-. |.|++-.|||.+... ++++++..++.... . . . +++..++..++|-..
T Consensus 49 ~i~~~~ri~Dai~Dp~~G~~~D~t-~~r~Gr~rp~il~g~-i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~ 126 (460)
T PRK11462 49 TMFLVARALDAISDPCMGLLADRT-RSRWGKFRPWVLFGA-LPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVV 126 (460)
T ss_pred HHHHHHHHHHHHHhhhheehhccC-CCCCCCcchhHhHHH-HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 344455566666666667775544 445566788876643 33444444333222 1 1 2 333445566666554
Q ss_pred chhhHHHhhhhcC-CCcccchhhhhhhhhhhhHHHHH
Q 009176 448 TSISVTTTTELFG-TKNFSVNHNIVVANIPIGSFLFG 483 (541)
Q Consensus 448 ~~l~P~ivse~FG-~k~fg~nyg~~~~a~~~Gs~l~~ 483 (541)
---+-++.+|+=- .+.=+..-++-.....+|..+.+
T Consensus 127 ~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~ 163 (460)
T PRK11462 127 NIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLST 163 (460)
T ss_pred hccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333311 23333334444444444444443
No 249
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=64.90 E-value=81 Score=34.51 Aligned_cols=142 Identities=15% Similarity=0.099 Sum_probs=82.9
Q ss_pred ccchhhhhhhcccccccc----cccchhhhcccCCCCChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhcc
Q 009176 373 TSSLVSLSSSFGFFGRLI----PSLFGYFFSRSKHMIPSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAI 447 (541)
Q Consensus 373 ~~~~Vsl~Si~N~~GRl~----~G~~s~~~~~~~~~~~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~ 447 (541)
...+-+++...-+.|-++ +|.+.|. ++|.+...++..+.++...+-....+ ..+.+.=+++|++.|+
T Consensus 111 s~~q~~llt~~v~~gmllga~~w~l~~d~-------~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg- 182 (528)
T KOG0253|consen 111 SEGQAPLLTLSVFLGMLVGAMVWGLSADT-------IGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG- 182 (528)
T ss_pred hhhhhhHHHHHHHhhhhhhhhhhheehhh-------hhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-
Confidence 345666666666776665 4555332 25666555555555554444333333 4577777899999999
Q ss_pred chhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHH
Q 009176 448 TSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLAL 527 (541)
Q Consensus 448 ~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl 527 (541)
.++-.++=.| |++.--...+-.+..-|.+|...-..++ ++--.+.. .|.-...+.....+.++.+.
T Consensus 183 ~pv~~~~yle-~lp~~~r~~~~V~~~~waig~v~ea~la-w~vm~~~g------------wr~~l~~~~~pl~~~a~f~~ 248 (528)
T KOG0253|consen 183 LPVDSAIYLE-FLPSSHRWLLTVMSFFWAIGQVFEALLA-WGVMSNFG------------WRYLLFTSSTPLMFAARFLV 248 (528)
T ss_pred ccHhHHHHHH-hccCcCCCcchhHHHHHHHHHHHHHHHH-HHHHHhhh------------HHHHHHHHHhHHHHHHHHHh
Confidence 6666555555 5676667778888877788776654433 22222223 55555555555555666666
Q ss_pred HHHhhhhccc
Q 009176 528 ILYARTRKFY 537 (541)
Q Consensus 528 ~l~~r~r~~Y 537 (541)
|+ ....|||
T Consensus 249 w~-~ESpRf~ 257 (528)
T KOG0253|consen 249 WV-YESPRFY 257 (528)
T ss_pred hc-ccCcchh
Confidence 55 2333454
No 250
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=64.50 E-value=20 Score=34.00 Aligned_cols=111 Identities=28% Similarity=0.231 Sum_probs=65.1
Q ss_pred cchHHHHHHhCCCh--hhHHHHHHhhhhhcccc-hhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHH
Q 009176 31 AYSSQLKQLLSLSQ--LQLNNLAFASDAGKLFG-WISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHI 107 (541)
Q Consensus 31 ~ys~~lk~~l~~sq--~~l~~l~~~~~~G~~~G-~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l 107 (541)
...+.+...++.+. .+...+.....++..++ ++.|.+.|+.|++..+.++......+......... ...|.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 97 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN-----VGLALL 97 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc-----chHHHH
Confidence 34455556666555 46677777777777664 89999999998887776666654444222222222 234555
Q ss_pred HHHHHHhccccccccceeeeeecccCCC--CCceehhhHHH
Q 009176 108 FLLTVLAGNSICWINTVCYVVTIKNFPF--DRQVAVGITSS 146 (541)
Q Consensus 108 ~~~~~l~g~g~~~~nTa~lvt~v~NFP~--~RG~a~gllk~ 146 (541)
.+..+..|.+.+....+....-.+.+|+ +|+.+.++...
T Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (338)
T COG0477 98 LILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTL 138 (338)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 5555545655554444444444466775 56666555444
No 251
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=55.95 E-value=13 Score=40.42 Aligned_cols=74 Identities=9% Similarity=0.115 Sum_probs=59.1
Q ss_pred HHHHhhcc-cchhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHhhhcCC
Q 009176 422 FMLLLNET-NVALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVYHKEGH 495 (541)
Q Consensus 422 ~ll~~~~~-~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~ 495 (541)
++++.... +..+|+++.+--+|-...-+-.-.++...-+...=|+.=|+......++=.++|.++|.+......
T Consensus 343 ~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~ 417 (451)
T KOG2615|consen 343 FLLLSLARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQG 417 (451)
T ss_pred HHHHhccccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecC
Confidence 34443333 357899999988888877777788888888889999999999999999999999999988765433
No 252
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=46.13 E-value=64 Score=27.33 Aligned_cols=63 Identities=19% Similarity=0.062 Sum_probs=49.2
Q ss_pred cccccchHHHHHHhCCChhhHHHHHHhhhhhcccch-hhhhhccccchHHHHHHHHHHHHHHHH
Q 009176 27 SNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLFGW-ISGVASVYLPLWLVLLIGSTLGLIGYG 89 (541)
Q Consensus 27 Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~G~-~~Gll~d~~pp~~vlliGa~~~~~GY~ 89 (541)
+.|..-=|.+.+..++|.+|...++.+.-+|-.+|- .+..+-++..++..+.+|.+...+...
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~ 72 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTA 72 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 445556688999999999999999999999987754 666667777777777777776665543
No 253
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=44.76 E-value=2.3e+02 Score=30.36 Aligned_cols=168 Identities=14% Similarity=0.081 Sum_probs=90.7
Q ss_pred hhHHHHHHHHHHhhcccceeecchHHHHhhhcCCcc---cchhhhhhhcccccccccccchhhhcccCCCCChhHHHHHH
Q 009176 338 VDFWLYFFVYFSGATLGLVFLNNLGQIAESRGCSGT---SSLVSLSSSFGFFGRLIPSLFGYFFSRSKHMIPSPASIGAL 414 (541)
Q Consensus 338 ~~Fwllf~~~~~g~g~Glm~I~n~g~i~~slg~~~~---~~~Vsl~Si~N~~GRl~~G~~s~~~~~~~~~~~R~~~l~~~ 414 (541)
.+|...|.....+-..-=-|.+. .-++.|+++. .+++.=+...-.+|=+.+...|++. .|..++.-+
T Consensus 37 r~yl~vY~La~~aDWLQGpY~Y~---LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~G-------rk~~cl~~c 106 (354)
T PF05631_consen 37 RKYLLVYLLAMAADWLQGPYLYA---LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYG-------RKKACLLFC 106 (354)
T ss_pred HHHHHHHHHHHHHHHhhcchhHH---HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------chHHHHHHH
Confidence 56777777766665443233331 2234455432 2233222223334444455556653 233454433
Q ss_pred HHHHHHHHHHHhhcccchhHHHHHHHHHhhhccchhhHHHhhhhcCCC-----cccchhhhhh-hhhhhhHHHHHHHHHH
Q 009176 415 MAPMAGAFMLLLNETNVALYTSTAIIGVCSGAITSISVTTTTELFGTK-----NFSVNHNIVV-ANIPIGSFLFGYLAAL 488 (541)
Q Consensus 415 ~~~~~~~~ll~~~~~~~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k-----~fg~nyg~~~-~a~~~Gs~l~~~laG~ 488 (541)
.+ -.++.+.-....-..|+++-++-|++.-..|+.+=+-.-.....+ ..+..++.+. +.+++-+++.+.++-.
T Consensus 107 il-y~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~ 185 (354)
T PF05631_consen 107 IL-YSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANV 185 (354)
T ss_pred HH-HHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHH
Confidence 22 222222222222246888999999999999998877543333333 4455666666 5666555555666666
Q ss_pred HhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHH
Q 009176 489 VYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLAL 527 (541)
Q Consensus 489 iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl 527 (541)
.-|..+.. ....|.....+++++.++..
T Consensus 186 l~~~~~~g-----------~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 186 LADWFGFG-----------PVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHhCCC-----------CcchHHHHHHHHHHHHHHHH
Confidence 66655432 36778888777777666543
No 254
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=42.48 E-value=8.3 Score=43.46 Aligned_cols=77 Identities=17% Similarity=-0.016 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCccccccchHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHHHHHHHHHH
Q 009176 13 LVGAIWLQSINGTNSNFPAYSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTLGLIGYGLQ 91 (541)
Q Consensus 13 l~as~~v~~~~Gt~Y~f~~ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~ 91 (541)
+.....+| ..-..|.-++-+ ++.+|++++.+|.-.|..+.|+|..+ .++..++-++..+...+.+|++...+|+++.
T Consensus 8 ~~~~~~~q-~~~~g~~~~~lt-tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 8 LCLLGLFQ-MMVSGYVNSSLT-TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHH-HHHHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHH
Confidence 34445566 555667666665 99999999999999999999999965 8888888887554444578888888887664
No 255
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=41.68 E-value=5e+02 Score=28.33 Aligned_cols=65 Identities=22% Similarity=0.127 Sum_probs=37.9
Q ss_pred hhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC
Q 009176 63 ISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF 135 (541)
Q Consensus 63 ~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~ 135 (541)
.+=++.++.|.+.-+.+..++..+|+.++-. . .++|.--+...+++.++++.-..-+- =.+.||+
T Consensus 78 ~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~--~-----~~v~~~l~Gv~las~ssg~GE~tfL~-lt~~y~~ 142 (402)
T PF02487_consen 78 IAPFFIHRVPYWIRILICVALSAAGMLLVAF--S-----PSVWVRLLGVVLASLSSGLGEVTFLS-LTHFYGK 142 (402)
T ss_pred HhHhhhhhccchHHHHHHHHHHHHHHhheee--c-----cchhHHHHHHHHHhhhhhhhHHHHHH-HHHhcCc
Confidence 3445566777666667777777888776533 2 23455445567777777754433222 2356665
No 256
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=39.10 E-value=1.4e+02 Score=31.23 Aligned_cols=57 Identities=18% Similarity=0.104 Sum_probs=37.0
Q ss_pred eeeeeecccCCCCC-c---eehhhHHHhhhhHHHHHHHHHHHHhcCCCCCcccchhhhhchhhhHhHhhcc
Q 009176 124 VCYVVTIKNFPFDR-Q---VAVGITSSYLGLSAKLYTSAVNAIETSSPNKRAKLYLLFNSIFPLLACVVTS 190 (541)
Q Consensus 124 a~lvt~v~NFP~~R-G---~a~gllk~~~GLSaaift~i~~~~~~~~~~~d~~~fLllla~~p~~v~l~~~ 190 (541)
+++.-+.-+||-.| | ..+++.-|.++..++.|+|-. +-+..+++.|+.+.+..-..+
T Consensus 133 ~g~~YTgGp~PlgY~gLGEi~~~vffG~l~v~g~~yiqt~----------~~~~~~ll~slp~gil~~~Il 193 (303)
T COG1575 133 AGILYTGGPFPLGYMGLGEIFVGVFFGPLIVLGAYYIQTG----------RLSWAILLPSLPVGILIANIL 193 (303)
T ss_pred heeeeccCCcCcccCCHHHHHHHHHHHHHHHHHHHHHhcc----------cchHHHHHHHHHHHHHHHHHH
Confidence 34444556888754 3 357888999999999999932 344556666665555444333
No 257
>PF12832 MFS_1_like: MFS_1 like family
Probab=38.77 E-value=41 Score=27.59 Aligned_cols=51 Identities=24% Similarity=0.180 Sum_probs=39.3
Q ss_pred chHHHHHHhCCChhhHHHHHHhhhhhccc-chhhhhhccccchHHHHHHHHHH
Q 009176 32 YSSQLKQLLSLSQLQLNNLAFASDAGKLF-GWISGVASVYLPLWLVLLIGSTL 83 (541)
Q Consensus 32 ys~~lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~Gll~d~~pp~~vlliGa~~ 83 (541)
.+--+| +.|+|.+|.-.+.....+=..+ ..+.|.+.|+++.+-.++.++..
T Consensus 23 l~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 23 LPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred hhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 344445 5899999999998888777755 88999999999977766666543
No 258
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=34.97 E-value=28 Score=32.74 Aligned_cols=40 Identities=15% Similarity=0.251 Sum_probs=30.2
Q ss_pred HHHHHHHHhhhccchhh-HHHhhhhcCCCcccchhhhhhhh
Q 009176 435 TSTAIIGVCSGAITSIS-VTTTTELFGTKNFSVNHNIVVAN 474 (541)
Q Consensus 435 ~~s~liG~~yG~~~~l~-P~ivse~FG~k~fg~nyg~~~~a 474 (541)
.+..++|++||.+-+-- |.-...++|.+++..||+-|--+
T Consensus 107 Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~a 147 (153)
T PF11947_consen 107 FGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMWEA 147 (153)
T ss_pred HHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHHH
Confidence 46678899999765443 33377789999999999987654
No 259
>COG2119 Predicted membrane protein [Function unknown]
Probab=34.52 E-value=52 Score=32.00 Aligned_cols=52 Identities=27% Similarity=0.380 Sum_probs=35.2
Q ss_pred ChhhHHHHHHhhh--------hhcccch---------hhhhhccccchHHHHHHHHHHHH-HHHHHHHHH
Q 009176 43 SQLQLNNLAFASD--------AGKLFGW---------ISGVASVYLPLWLVLLIGSTLGL-IGYGLQYLF 94 (541)
Q Consensus 43 sq~~l~~l~~~~~--------~G~~~G~---------~~Gll~d~~pp~~vlliGa~~~~-~GY~~~~l~ 94 (541)
|-+|+++|+.+.+ +|+++|. .+.++.+|.|++.+-++++++.+ .|--.+|..
T Consensus 116 DKTQiATIaLaA~~~~~~~V~~Gt~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal~~~~~~ 185 (190)
T COG2119 116 DKTQIATIALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFALVLLWQV 185 (190)
T ss_pred cHHHHHHHHHhhcCCCceeeehhhHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6799999999887 3444432 35567899999999888776543 443344443
No 260
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=30.61 E-value=72 Score=27.27 Aligned_cols=44 Identities=27% Similarity=0.487 Sum_probs=36.6
Q ss_pred hhcccchhhhhhccccc---hHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009176 56 AGKLFGWISGVASVYLP---LWLVLLIGSTLGLIGYGLQYLFLTHTI 99 (541)
Q Consensus 56 ~G~~~G~~~Gll~d~~p---p~~vlliGa~~~~~GY~~~~l~~~~~i 99 (541)
+|+.++..+|.+.-++| |-.++-+|+++...||-.+=..+.++.
T Consensus 41 lGs~~S~~Aga~Li~~Pdl~plAv~GlgsalGI~G~q~vE~~lrr~~ 87 (89)
T PF04550_consen 41 LGSAVSVVAGAALIQFPDLPPLAVIGLGSALGIAGYQAVEAWLRRRL 87 (89)
T ss_pred HhhHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 67777888888877765 889999999999999998877777654
No 261
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=28.48 E-value=8.1e+02 Score=26.79 Aligned_cols=111 Identities=24% Similarity=0.291 Sum_probs=63.6
Q ss_pred HHHHHHHHHhhcccceeecchHHHHhhh-cCC--cccchhhhhhhcccccccccccc-hhhhcccCCCCChhHHHHHHHH
Q 009176 341 WLYFFVYFSGATLGLVFLNNLGQIAESR-GCS--GTSSLVSLSSSFGFFGRLIPSLF-GYFFSRSKHMIPSPASIGALMA 416 (541)
Q Consensus 341 wllf~~~~~g~g~Glm~I~n~g~i~~sl-g~~--~~~~~Vsl~Si~N~~GRl~~G~~-s~~~~~~~~~~~R~~~l~~~~~ 416 (541)
|+|-+..++++.+|+++=..++..+..+ |-. +.+..|+..-.+-.+|-+.+=++ ||-. .-|..-.=..+.
T Consensus 10 alL~laVf~~aa~GlvyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~------~~~Fv~vElllg 83 (508)
T COG4262 10 ALLLLAVFVCAACGLVYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAA------LARFVDVELLLG 83 (508)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchH------HHHHHHHHHHHH
Confidence 5666677777789999999999988876 322 45556665555555554444333 2211 112221111111
Q ss_pred ----HHHH-HHHHHhhccc---chhHHHHHHHHHhhhccchhhHHHhhh
Q 009176 417 ----PMAG-AFMLLLNETN---VALYTSTAIIGVCSGAITSISVTTTTE 457 (541)
Q Consensus 417 ----~~~~-~~ll~~~~~~---~~l~~~s~liG~~yG~~~~l~P~ivse 457 (541)
..+. .++.+++... ..+|..+.+||.--|+-.++.-.+.-.
T Consensus 84 ligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 84 LIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 1111 1334444332 358999999999999988877665543
No 262
>PRK12821 aspartyl/glutamyl-tRNA amidotransferase subunit C-like protein; Provisional
Probab=28.02 E-value=2e+02 Score=31.88 Aligned_cols=55 Identities=22% Similarity=0.306 Sum_probs=40.7
Q ss_pred hHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHHHHHHHHHh
Q 009176 433 LYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLFGYLAALVY 490 (541)
Q Consensus 433 l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~~~laG~iy 490 (541)
-.+...+.|.-||-.++..-+.++|+-|+ -++ =|.-+-+..+.+.+.+.+.|.+.
T Consensus 98 gfIpi~l~G~LFGP~~G~l~g~lsDlLg~-if~--~G~fFpGFTLsA~L~GlIyGl~r 152 (477)
T PRK12821 98 ELILVKISGLLFGPIIGIFSAATIDFLTV-IFS--GGVFNYGYVLGAILTGMIAGILR 152 (477)
T ss_pred hhHHHHHHHHHhhhHHHHHHHHHHHHHHh-hcC--CCCccHHHHHHHHHHHHHHHHHH
Confidence 46688899999999999999999999882 222 24555555666666666676654
No 263
>PF10283 zf-CCHH: Zinc-finger (CX5CX6HX5H) motif; InterPro: IPR019406 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. C2H2-type (classical) zinc fingers (Znf) were the first class to be characterised. They contain a short beta hairpin and an alpha helix (beta/beta/alpha structure), where a single zinc atom is held in place by Cys(2)His(2) (C2H2) residues in a tetrahedral array. C2H2 Znf's can be divided into three groups based on the number and pattern of fingers: triple-C2H2 (binds single ligand), multiple-adjacent-C2H2 (binds multiple ligands), and separated paired-C2H2 []. C2H2 Znf's are the most common DNA-binding motifs found in eukaryotic transcription factors, and have also been identified in prokaryotes []. Transcription factors usually contain several Znf's (each with a conserved beta/beta/alpha structure) capable of making multiple contacts along the DNA, where the C2H2 Znf motifs recognise DNA sequences by binding to the major groove of DNA via a short alpha-helix in the Znf, the Znf spanning 3-4 bases of the DNA []. C2H2 Znf's can also bind to RNA and protein targets []. This entry represents a C2H2-type Znf motif that in humans is part of the APLF (aprataxin- and PNK-like) forkead association domain-containing protein []. The Znf is highly conserved both in primary sequence and in the spacing between the putative zinc coordinating residues, and is configured CX5CX6HX5H. Many of the proteins containing this Znf are involved in DNA strand break repair and/or contain domains implicated in DNA metabolism. This Znf motif appears to be specialised for the non-covalent binding of poly ADP-ribose; Aprataxin also appears to covalently bind poly ADP-ribose, but not through its Znf motif [].; PDB: 2KQC_A 2KUO_A 2KQE_A 2KQD_A 2KQB_A.
Probab=27.85 E-value=24 Score=23.31 Aligned_cols=10 Identities=50% Similarity=1.341 Sum_probs=5.0
Q ss_pred cc-ccccccHH
Q 009176 501 KC-MGMACYRS 510 (541)
Q Consensus 501 ~C-~G~~CY~~ 510 (541)
.| .|..|||.
T Consensus 2 ~C~YG~~CYRk 12 (26)
T PF10283_consen 2 PCKYGAKCYRK 12 (26)
T ss_dssp E-TTGGG-S--
T ss_pred CCCcchhhhcC
Confidence 48 79999984
No 264
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=26.86 E-value=60 Score=34.27 Aligned_cols=33 Identities=12% Similarity=0.013 Sum_probs=26.3
Q ss_pred ccCCCCCceehhhHHHhhhhHHHHHHHHHHHHh
Q 009176 131 KNFPFDRQVAVGITSSYLGLSAKLYTSAVNAIE 163 (541)
Q Consensus 131 ~NFP~~RG~a~gllk~~~GLSaaift~i~~~~~ 163 (541)
+-|+++......-+.-++.|=+.+|+.+++...
T Consensus 23 ~~l~~~~~~~ls~lv~~~~lP~liF~~i~~~~~ 55 (385)
T PF03547_consen 23 GILDPEASKGLSKLVFNVFLPALIFSSIANTDT 55 (385)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 556777667777788888999999999998653
No 265
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=26.60 E-value=1.5e+02 Score=27.84 Aligned_cols=85 Identities=12% Similarity=-0.065 Sum_probs=57.2
Q ss_pred chhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHhccccccccceeeeeecccCCC-CCce
Q 009176 61 GWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTISHLSYAHIFLLTVLAGNSICWINTVCYVVTIKNFPF-DRQV 139 (541)
Q Consensus 61 G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~~~~~w~l~~~~~l~g~g~~~~nTa~lvt~v~NFP~-~RG~ 139 (541)
.+++..+.++.+|+..+.+|++.-. -|..-.+ . +..|.+-....+.|.+.+...|+--.--.++-.+ +|++
T Consensus 54 ~l~~P~iv~~lg~K~sm~lg~~~y~-~y~~~~~---~----~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~ 125 (156)
T PF05978_consen 54 CLFAPSIVNKLGPKWSMILGSLGYA-IYIASFF---Y----PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGR 125 (156)
T ss_pred HHhHHHHHHHHhhHHHHHHHHHHHH-HHHHHHH---h----hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhh
Confidence 5678889999999999999886544 2322222 1 1236667777788888887777754333345544 6888
Q ss_pred ehhhHHHhhhhHHH
Q 009176 140 AVGITSSYLGLSAK 153 (541)
Q Consensus 140 a~gllk~~~GLSaa 153 (541)
-.|+-.+.+-.|..
T Consensus 126 ~~~ifw~i~~~s~i 139 (156)
T PF05978_consen 126 NTGIFWAIFQSSLI 139 (156)
T ss_pred HHHHHHHHHHHHHH
Confidence 88988888775433
No 266
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=23.21 E-value=2.3e+02 Score=30.73 Aligned_cols=118 Identities=15% Similarity=0.215 Sum_probs=77.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHhhhccchhhHHHhhhhcCCCcccchhhhhhhhhhhhHHHH-H
Q 009176 406 PSPASIGALMAPMAGAFMLLLNETN-VALYTSTAIIGVCSGAITSISVTTTTELFGTKNFSVNHNIVVANIPIGSFLF-G 483 (541)
Q Consensus 406 ~R~~~l~~~~~~~~~~~ll~~~~~~-~~l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg~nyg~~~~a~~~Gs~l~-~ 483 (541)
++...+.+..+..+...+.+..+.+ ...|++-++....|+....+.-..+++.--.+.||-.||+=+ +=+.+. +
T Consensus 301 ~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNT----FvAl~lQs 376 (433)
T KOG3810|consen 301 WGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINT----FVALILQS 376 (433)
T ss_pred hhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHH----HHHHHHHH
Confidence 4455666666666666666666666 458889999999999999999888888888888888888744 223333 4
Q ss_pred HHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH
Q 009176 484 YLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALIL 529 (541)
Q Consensus 484 ~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l 529 (541)
.+.-..-|+.+-+-+ .=.--.-|..=|++.++..+++..+....
T Consensus 377 ilT~iVvd~~g~~L~--ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 377 ILTLIVVDDRGLGLD--IRTQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred hheEEEEcccccCCC--cceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 444444565443210 00111225555888888888887774443
No 267
>COG2383 Uncharacterized conserved protein [Function unknown]
Probab=23.15 E-value=67 Score=28.14 Aligned_cols=54 Identities=26% Similarity=0.327 Sum_probs=41.7
Q ss_pred ChhhHHHHHHhhhhhc--ccchhhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009176 43 SQLQLNNLAFASDAGK--LFGWISGVASVYLPLWLVLLIGSTLGLIGYGLQYLFLTHTIS 100 (541)
Q Consensus 43 sq~~l~~l~~~~~~G~--~~G~~~Gll~d~~pp~~vlliGa~~~~~GY~~~~l~~~~~i~ 100 (541)
+|.+.|.=++-.|+|. .+|+.+|+..-+...=+.+++|.... .++||+..|.|.
T Consensus 9 ~~i~~~f~g~l~dlG~G~ilGf~~GyAlkk~ikvvl~liGvyil----sl~~La~~GVIt 64 (109)
T COG2383 9 AQIDLDFTGILPDLGIGGILGFAAGYALKKAIKVVLLLIGVYIL----SLFWLAQYGVIT 64 (109)
T ss_pred HHhhhhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHcCeEE
Confidence 3566777788888887 55999999998888777788877554 468888888763
No 268
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=23.00 E-value=1.5e+02 Score=27.79 Aligned_cols=49 Identities=20% Similarity=0.178 Sum_probs=27.5
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q 009176 472 VANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRSTFILWGSFCLFGTFLALILYARTRKFYSQ 539 (541)
Q Consensus 472 ~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~tF~i~~~~~~~g~~lsl~l~~r~r~~Y~~ 539 (541)
++.|.++-+++..++.++.+.|. +.+...++++++++++.+|-+|..++
T Consensus 82 Yi~PL~~l~v~~~La~~L~~~e~-------------------~~~~~~~lg~~l~fl~~r~ysRkl~~ 130 (150)
T COG3086 82 YIFPLVGLFLGAILAQYLFFSEL-------------------IVIFGAFLGLALGFLLARRYSRKLAK 130 (150)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhH-------------------HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34455555555666666665443 22334456777777776666554443
No 269
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=21.23 E-value=3.4e+02 Score=30.23 Aligned_cols=78 Identities=17% Similarity=0.219 Sum_probs=51.7
Q ss_pred hHHHHHHHHHhhhccchhhHHHhhhhcCCCccc-chhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCccccccccHHH
Q 009176 433 LYTSTAIIGVCSGAITSISVTTTTELFGTKNFS-VNHNIVVANIPIGSFLFGYLAALVYHKEGHNAHNGKCMGMACYRST 511 (541)
Q Consensus 433 l~~~s~liG~~yG~~~~l~P~ivse~FG~k~fg-~nyg~~~~a~~~Gs~l~~~laG~iyD~~~~~~~~~~C~G~~CY~~t 511 (541)
+.+.....|+..|..++++-.+ -+.-=.++|. ++=|.+..-..+++.++..+.|.+-|++.. |+.+
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l-~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~------------fk~~ 334 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLL-NLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKK------------FKLT 334 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHh-hhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhh------------HHHH
Confidence 3344444455555444443222 1123334443 667777777778889999999999999988 9998
Q ss_pred HHHHHHHHHHHH
Q 009176 512 FILWGSFCLFGT 523 (541)
Q Consensus 512 F~i~~~~~~~g~ 523 (541)
-.+.....++++
T Consensus 335 ~~v~~~~~~v~~ 346 (480)
T KOG2563|consen 335 TLVLYLFALVGT 346 (480)
T ss_pred HHHHHHHHHHHH
Confidence 888888777665
Done!