Query 009181
Match_columns 541
No_of_seqs 383 out of 3642
Neff 8.7
Searched_HMMs 46136
Date Thu Mar 28 21:24:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009181.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009181hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1383 Glutamate decarboxylas 100.0 9.3E-79 2E-83 601.3 42.0 475 51-540 2-485 (491)
2 PLN02590 probable tyrosine dec 100.0 2E-55 4.4E-60 466.0 37.9 408 82-505 84-536 (539)
3 COG0076 GadB Glutamate decarbo 100.0 1.5E-53 3.3E-58 444.9 35.7 366 96-474 26-407 (460)
4 TIGR01788 Glu-decarb-GAD gluta 100.0 3.7E-52 8E-57 433.8 41.7 391 98-502 12-430 (431)
5 PLN02880 tyrosine decarboxylas 100.0 2.4E-52 5.2E-57 443.0 37.7 406 83-504 37-487 (490)
6 PF00282 Pyridoxal_deC: Pyrido 100.0 9.2E-53 2E-57 432.3 30.2 341 97-449 6-373 (373)
7 PLN02263 serine decarboxylase 100.0 7.6E-50 1.7E-54 412.9 38.2 355 110-502 76-444 (470)
8 TIGR03799 NOD_PanD_pyr putativ 100.0 4.6E-48 9.9E-53 410.8 37.4 381 100-494 59-518 (522)
9 PLN03032 serine decarboxylase; 100.0 3E-47 6.4E-52 389.0 34.3 319 151-498 42-373 (374)
10 PRK02769 histidine decarboxyla 100.0 5.7E-46 1.2E-50 382.5 36.5 325 146-501 37-372 (380)
11 KOG0628 Aromatic-L-amino-acid/ 100.0 1.1E-45 2.3E-50 365.1 31.7 420 70-504 14-474 (511)
12 TIGR03811 tyr_de_CO2_Ent tyros 100.0 6.1E-44 1.3E-48 381.7 38.5 353 102-465 54-524 (608)
13 KOG0629 Glutamate decarboxylas 100.0 6.6E-42 1.4E-46 334.4 20.0 399 82-501 56-509 (510)
14 PRK13520 L-tyrosine decarboxyl 100.0 2.2E-38 4.7E-43 329.0 39.1 367 108-500 2-370 (371)
15 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1.4E-36 3.1E-41 315.7 40.9 367 110-497 3-372 (373)
16 cd06450 DOPA_deC_like DOPA dec 100.0 3.9E-38 8.5E-43 323.8 28.1 311 144-497 11-344 (345)
17 COG0520 csdA Selenocysteine ly 100.0 5.7E-36 1.2E-40 309.5 36.5 312 163-500 58-404 (405)
18 COG1104 NifS Cysteine sulfinat 100.0 5.6E-36 1.2E-40 298.3 33.2 305 168-504 41-380 (386)
19 PRK04366 glycine dehydrogenase 100.0 1.2E-33 2.6E-38 301.2 39.6 383 100-508 43-455 (481)
20 TIGR03392 FeS_syn_CsdA cystein 100.0 9.9E-33 2.2E-37 289.3 34.5 308 168-502 57-396 (398)
21 PRK10874 cysteine sulfinate de 100.0 1.9E-32 4E-37 287.5 36.4 309 167-502 59-399 (401)
22 TIGR00461 gcvP glycine dehydro 100.0 8.9E-32 1.9E-36 296.8 40.3 374 109-504 467-870 (939)
23 PRK09295 bifunctional cysteine 100.0 3.7E-32 8.1E-37 285.6 35.3 308 166-500 62-403 (406)
24 TIGR01979 sufS cysteine desulf 100.0 8.1E-32 1.8E-36 282.9 36.5 312 168-502 59-402 (403)
25 TIGR03402 FeS_nifS cysteine de 100.0 9.4E-32 2E-36 280.1 36.1 308 167-504 38-375 (379)
26 PRK05367 glycine dehydrogenase 100.0 2.7E-31 5.9E-36 298.3 39.0 370 108-504 478-878 (954)
27 PLN02855 Bifunctional selenocy 100.0 1.7E-31 3.7E-36 282.1 35.2 313 169-504 74-421 (424)
28 cd06453 SufS_like Cysteine des 100.0 3.6E-31 7.7E-36 275.2 34.2 306 166-495 38-373 (373)
29 PLN02651 cysteine desulfurase 100.0 2.8E-31 6.1E-36 274.9 32.7 294 167-489 39-364 (364)
30 PRK00451 glycine dehydrogenase 100.0 8.1E-31 1.8E-35 278.8 36.5 368 96-499 36-446 (447)
31 TIGR01977 am_tr_V_EF2568 cyste 100.0 8.2E-31 1.8E-35 272.7 35.6 305 169-497 42-375 (376)
32 TIGR03403 nifS_epsilon cystein 100.0 1.7E-30 3.8E-35 270.8 37.5 303 174-504 45-378 (382)
33 TIGR02006 IscS cysteine desulf 100.0 5.5E-30 1.2E-34 268.7 36.1 306 170-504 46-380 (402)
34 TIGR01976 am_tr_V_VC1184 cyste 100.0 2.3E-29 5E-34 263.8 33.2 305 166-495 55-397 (397)
35 PF00266 Aminotran_5: Aminotra 100.0 2E-29 4.3E-34 261.9 31.8 303 165-491 37-371 (371)
36 PRK02948 cysteine desulfurase; 100.0 8.1E-29 1.7E-33 258.2 36.3 307 167-503 39-376 (381)
37 PLN02414 glycine dehydrogenase 100.0 9.7E-29 2.1E-33 276.3 37.9 376 99-504 493-910 (993)
38 cd06451 AGAT_like Alanine-glyo 100.0 2.1E-29 4.6E-34 260.2 30.3 332 135-500 4-356 (356)
39 TIGR03531 selenium_SpcS O-phos 100.0 3.2E-29 6.9E-34 260.3 30.3 356 100-498 27-443 (444)
40 PRK14012 cysteine desulfurase; 100.0 6.5E-28 1.4E-32 253.2 35.4 305 171-504 49-382 (404)
41 PRK12566 glycine dehydrogenase 100.0 8.6E-28 1.9E-32 263.5 35.0 381 99-504 468-879 (954)
42 TIGR01814 kynureninase kynuren 100.0 5.6E-28 1.2E-32 253.8 31.1 301 171-499 71-405 (406)
43 cd00613 GDC-P Glycine cleavage 100.0 9.2E-28 2E-32 251.7 32.5 356 111-495 3-398 (398)
44 KOG1549 Cysteine desulfurase N 100.0 3.3E-28 7.1E-33 243.4 26.5 331 145-504 60-421 (428)
45 TIGR03235 DNA_S_dndA cysteine 100.0 5.6E-27 1.2E-31 241.8 32.5 274 168-467 39-318 (353)
46 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 3E-26 6.4E-31 239.1 35.3 298 172-502 64-382 (387)
47 PLN02409 serine--glyoxylate am 100.0 6.3E-27 1.4E-31 245.1 30.0 331 144-504 20-375 (401)
48 TIGR02326 transamin_PhnW 2-ami 100.0 1.7E-26 3.6E-31 239.2 31.5 307 167-499 31-360 (363)
49 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 2.7E-26 5.8E-31 237.5 32.8 294 174-499 47-360 (361)
50 PLN02483 serine palmitoyltrans 100.0 2.1E-26 4.6E-31 245.7 28.9 427 23-503 2-468 (489)
51 COG1003 GcvP Glycine cleavage 100.0 2.1E-25 4.6E-30 220.1 32.2 384 99-506 36-452 (496)
52 COG0436 Aspartate/tyrosine/aro 100.0 1E-25 2.3E-30 233.5 31.5 326 145-502 43-392 (393)
53 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 1E-25 2.2E-30 232.4 30.9 329 136-498 5-354 (355)
54 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 6.8E-25 1.5E-29 227.5 34.7 295 174-501 54-368 (370)
55 PRK05367 glycine dehydrogenase 99.9 3.9E-25 8.4E-30 248.8 35.0 357 99-496 50-437 (954)
56 PRK13479 2-aminoethylphosphona 99.9 6.7E-25 1.5E-29 227.6 32.1 309 169-502 35-364 (368)
57 PF02347 GDC-P: Glycine cleava 99.9 7.3E-25 1.6E-29 223.7 29.7 382 76-495 14-429 (429)
58 PLN02414 glycine dehydrogenase 99.9 2.1E-24 4.6E-29 241.6 33.9 359 100-497 75-465 (993)
59 PTZ00094 serine hydroxymethylt 99.9 1E-24 2.2E-29 231.6 28.9 305 166-502 75-409 (452)
60 PRK06108 aspartate aminotransf 99.9 6.2E-24 1.3E-28 221.5 33.0 321 147-500 41-381 (382)
61 PLN02724 Molybdenum cofactor s 99.9 2.5E-24 5.3E-29 242.6 30.5 309 166-500 73-487 (805)
62 TIGR00461 gcvP glycine dehydro 99.9 1.1E-23 2.4E-28 232.9 34.9 359 99-496 38-426 (939)
63 PRK05957 aspartate aminotransf 99.9 1.6E-23 3.6E-28 218.7 34.3 311 161-503 59-387 (389)
64 PRK08361 aspartate aminotransf 99.9 1.5E-23 3.2E-28 219.3 31.3 319 148-501 51-390 (391)
65 PLN02721 threonine aldolase 99.9 1E-23 2.2E-28 217.4 29.5 290 175-501 44-352 (353)
66 cd06454 KBL_like KBL_like; thi 99.9 7.5E-24 1.6E-28 218.0 27.8 330 130-498 6-348 (349)
67 COG0075 Serine-pyruvate aminot 99.9 2.7E-23 5.8E-28 209.3 30.5 315 165-504 32-366 (383)
68 PRK05764 aspartate aminotransf 99.9 4.2E-23 9.1E-28 216.1 32.4 324 147-502 48-392 (393)
69 COG0403 GcvP Glycine cleavage 99.9 8.2E-23 1.8E-27 202.3 31.8 351 106-498 55-447 (450)
70 cd00609 AAT_like Aspartate ami 99.9 3.5E-23 7.6E-28 212.5 30.6 316 154-497 23-350 (350)
71 PLN02822 serine palmitoyltrans 99.9 2.9E-23 6.3E-28 221.2 30.8 327 144-503 128-479 (481)
72 PRK06207 aspartate aminotransf 99.9 1.3E-22 2.7E-27 213.0 34.5 309 161-503 72-404 (405)
73 PRK07179 hypothetical protein; 99.9 2.9E-23 6.2E-28 218.3 29.2 289 173-502 101-399 (407)
74 TIGR01822 2am3keto_CoA 2-amino 99.9 2.6E-23 5.6E-28 217.7 28.1 296 168-502 80-390 (393)
75 PRK06225 aspartate aminotransf 99.9 1.4E-22 3.1E-27 211.1 33.0 291 175-504 70-379 (380)
76 PRK07682 hypothetical protein; 99.9 1.3E-22 2.7E-27 211.4 31.3 308 161-502 51-377 (378)
77 TIGR01437 selA_rel uncharacter 99.9 8.3E-23 1.8E-27 210.8 29.6 291 169-498 43-362 (363)
78 PRK03080 phosphoserine aminotr 99.9 4.6E-23 1E-27 214.1 26.4 304 167-504 44-376 (378)
79 PLN00175 aminotransferase fami 99.9 5.3E-22 1.2E-26 208.6 33.7 321 147-500 71-412 (413)
80 TIGR01141 hisC histidinol-phos 99.9 5.7E-23 1.2E-27 211.4 25.6 281 175-496 58-346 (346)
81 cd06502 TA_like Low-specificit 99.9 2.4E-23 5.2E-28 213.3 22.7 286 173-497 34-337 (338)
82 PLN00145 tyrosine/nicotianamin 99.9 8.5E-22 1.8E-26 207.9 34.2 314 162-504 89-427 (430)
83 PRK07681 aspartate aminotransf 99.9 6.8E-22 1.5E-26 207.3 33.2 316 147-498 49-385 (399)
84 PRK14807 histidinol-phosphate 99.9 5.4E-22 1.2E-26 204.4 31.6 282 175-499 63-350 (351)
85 PTZ00433 tyrosine aminotransfe 99.9 7.9E-22 1.7E-26 207.6 32.3 324 146-503 53-410 (412)
86 PLN00143 tyrosine/nicotianamin 99.9 2.5E-21 5.4E-26 203.4 35.9 327 146-505 52-408 (409)
87 PLN02656 tyrosine transaminase 99.9 6.9E-22 1.5E-26 207.8 31.4 323 146-502 51-404 (409)
88 cd00611 PSAT_like Phosphoserin 99.9 3.7E-23 8E-28 213.1 21.3 301 167-498 40-353 (355)
89 PRK07324 transaminase; Validat 99.9 8.6E-22 1.9E-26 204.5 31.5 304 156-501 51-370 (373)
90 TIGR03537 DapC succinyldiamino 99.9 1.2E-21 2.5E-26 201.9 31.8 305 161-497 30-349 (350)
91 PRK08912 hypothetical protein; 99.9 1.2E-21 2.5E-26 204.8 32.1 306 161-500 57-385 (387)
92 PLN02187 rooty/superroot1 99.9 1.9E-21 4.1E-26 206.7 34.0 315 161-505 102-442 (462)
93 PRK06290 aspartate aminotransf 99.9 1.2E-21 2.5E-26 205.6 31.8 303 167-503 81-407 (410)
94 PRK08363 alanine aminotransfer 99.9 1E-21 2.2E-26 206.0 31.1 308 163-501 66-394 (398)
95 PRK07337 aminotransferase; Val 99.9 9.9E-22 2.2E-26 205.3 30.8 313 149-499 49-387 (388)
96 PRK04870 histidinol-phosphate 99.9 5.2E-22 1.1E-26 205.0 28.2 282 175-498 67-355 (356)
97 COG1168 MalY Bifunctional PLP- 99.9 7.2E-22 1.6E-26 193.6 27.4 329 144-501 39-386 (388)
98 PRK13355 bifunctional HTH-doma 99.9 1.1E-21 2.5E-26 211.9 31.7 311 161-502 179-515 (517)
99 PRK08960 hypothetical protein; 99.9 2.2E-21 4.8E-26 202.6 32.6 315 147-499 49-385 (387)
100 TIGR01265 tyr_nico_aTase tyros 99.9 5.8E-21 1.3E-25 200.5 35.8 310 162-501 68-401 (403)
101 PRK09082 methionine aminotrans 99.9 7.5E-22 1.6E-26 206.1 28.9 304 161-497 61-385 (386)
102 PRK01688 histidinol-phosphate 99.9 2.5E-22 5.3E-27 206.9 24.9 281 174-496 60-351 (351)
103 cd00616 AHBA_syn 3-amino-5-hyd 99.9 8.1E-22 1.8E-26 203.2 28.2 293 175-496 22-352 (352)
104 cd00378 SHMT Serine-glycine hy 99.9 1E-21 2.3E-26 206.2 29.5 302 164-501 58-385 (402)
105 TIGR01264 tyr_amTase_E tyrosin 99.9 1.8E-21 3.9E-26 204.3 31.0 303 163-501 69-399 (401)
106 PRK05387 histidinol-phosphate 99.9 1.2E-21 2.6E-26 202.1 29.1 283 175-500 64-352 (353)
107 TIGR03540 DapC_direct LL-diami 99.9 3.9E-21 8.4E-26 200.5 33.1 301 161-496 61-381 (383)
108 PRK09276 LL-diaminopimelate am 99.9 4.1E-21 8.8E-26 200.5 32.4 301 162-497 64-384 (385)
109 PRK07309 aromatic amino acid a 99.9 4.8E-21 1E-25 200.3 32.9 308 162-503 62-390 (391)
110 PRK06107 aspartate aminotransf 99.9 3.3E-21 7.1E-26 202.3 31.7 321 148-502 51-401 (402)
111 PRK09147 succinyldiaminopimela 99.9 3.3E-21 7.1E-26 202.0 31.2 321 147-499 46-394 (396)
112 PRK07550 hypothetical protein; 99.9 6E-21 1.3E-25 199.3 33.0 305 161-498 61-384 (386)
113 PRK05958 8-amino-7-oxononanoat 99.9 1.2E-21 2.6E-26 204.3 27.8 291 169-498 82-384 (385)
114 PTZ00377 alanine aminotransfer 99.9 4.4E-21 9.6E-26 205.6 32.6 313 160-504 108-478 (481)
115 PRK12414 putative aminotransfe 99.9 2.9E-21 6.3E-26 201.4 29.9 300 161-497 60-383 (384)
116 TIGR01364 serC_1 phosphoserine 99.9 8.8E-22 1.9E-26 201.6 25.0 299 166-500 32-347 (349)
117 PRK05942 aspartate aminotransf 99.9 1.1E-20 2.3E-25 197.9 33.7 302 161-496 67-387 (394)
118 PRK00950 histidinol-phosphate 99.9 2.2E-21 4.7E-26 200.8 28.0 280 174-499 72-360 (361)
119 PRK07568 aspartate aminotransf 99.9 1.5E-20 3.3E-25 197.1 34.3 320 147-503 47-394 (397)
120 PRK06939 2-amino-3-ketobutyrat 99.9 1.8E-21 4E-26 203.9 27.3 298 166-502 82-394 (397)
121 PRK06348 aspartate aminotransf 99.9 1.2E-20 2.6E-25 196.9 33.2 302 161-498 60-382 (384)
122 PRK02731 histidinol-phosphate 99.9 2.6E-21 5.5E-26 200.7 27.7 286 175-500 71-365 (367)
123 PLN02376 1-aminocyclopropane-1 99.9 1.8E-20 4E-25 200.3 34.7 311 163-504 90-441 (496)
124 TIGR01825 gly_Cac_T_rel pyrido 99.9 3.6E-21 7.7E-26 201.0 28.4 300 163-502 70-382 (385)
125 PRK09105 putative aminotransfe 99.9 3.5E-21 7.6E-26 199.5 27.9 281 173-499 80-368 (370)
126 PRK07683 aminotransferase A; V 99.9 1.6E-20 3.4E-25 196.1 32.7 318 148-500 46-382 (387)
127 PRK03158 histidinol-phosphate 99.9 6.4E-21 1.4E-25 197.2 29.5 282 175-498 68-358 (359)
128 PRK08056 threonine-phosphate d 99.9 3.5E-21 7.6E-26 198.8 27.4 284 174-499 58-353 (356)
129 PRK08068 transaminase; Reviewe 99.9 2E-20 4.3E-25 195.6 33.1 302 162-497 65-385 (389)
130 PLN03026 histidinol-phosphate 99.9 7.6E-21 1.7E-25 197.8 29.6 283 175-498 90-379 (380)
131 PRK12566 glycine dehydrogenase 99.9 1.8E-20 3.9E-25 206.2 33.6 355 99-496 53-439 (954)
132 PRK07366 succinyldiaminopimela 99.9 1.7E-20 3.8E-25 196.0 32.0 305 161-498 62-387 (388)
133 PRK05937 8-amino-7-oxononanoat 99.9 7.3E-21 1.6E-25 197.4 28.9 325 135-505 14-354 (370)
134 PRK15481 transcriptional regul 99.9 8.2E-21 1.8E-25 201.1 29.6 295 167-500 121-430 (431)
135 KOG0259 Tyrosine aminotransfer 99.9 4.6E-20 1E-24 179.5 32.0 313 163-503 99-435 (447)
136 PRK07777 aminotransferase; Val 99.9 2E-20 4.4E-25 195.4 32.1 307 159-499 53-384 (387)
137 PLN02450 1-aminocyclopropane-1 99.9 1.6E-20 3.5E-25 199.9 31.6 307 163-503 82-432 (468)
138 PRK06836 aspartate aminotransf 99.9 1.8E-20 3.9E-25 196.1 31.5 309 162-502 68-392 (394)
139 PRK00011 glyA serine hydroxyme 99.9 1.6E-20 3.5E-25 198.0 31.2 298 167-500 67-388 (416)
140 TIGR00858 bioF 8-amino-7-oxono 99.9 5.2E-21 1.1E-25 197.6 26.8 287 171-496 61-360 (360)
141 PRK13392 5-aminolevulinate syn 99.9 6.5E-21 1.4E-25 200.6 27.7 293 173-502 93-398 (410)
142 PRK04635 histidinol-phosphate 99.9 3.6E-21 7.8E-26 198.5 25.0 280 175-497 64-351 (354)
143 TIGR01821 5aminolev_synth 5-am 99.9 1.1E-20 2.3E-25 198.5 28.8 294 171-502 90-397 (402)
144 KOG1357 Serine palmitoyltransf 99.9 2E-22 4.2E-27 199.7 14.6 430 20-501 32-502 (519)
145 PRK02610 histidinol-phosphate 99.9 1.8E-20 3.9E-25 194.8 30.1 293 167-502 66-372 (374)
146 KOG0257 Kynurenine aminotransf 99.9 5E-21 1.1E-25 189.5 24.3 308 110-449 17-344 (420)
147 PRK09265 aminotransferase AlaT 99.9 3.3E-20 7.2E-25 194.8 32.3 312 161-502 66-402 (404)
148 PRK03317 histidinol-phosphate 99.9 1.5E-20 3.2E-25 195.1 29.2 294 167-501 65-364 (368)
149 PRK01533 histidinol-phosphate 99.9 1.1E-20 2.4E-25 195.5 28.0 284 175-503 68-357 (366)
150 PRK08636 aspartate aminotransf 99.9 5.4E-20 1.2E-24 193.1 33.6 309 160-502 64-401 (403)
151 PRK05355 3-phosphoserine/phosp 99.9 4.8E-21 1.1E-25 197.1 24.8 301 166-500 43-357 (360)
152 PLN02607 1-aminocyclopropane-1 99.9 4.5E-20 9.8E-25 195.1 32.7 309 165-504 93-440 (447)
153 PRK08133 O-succinylhomoserine 99.9 2E-20 4.2E-25 194.8 29.3 274 175-500 65-389 (390)
154 PRK08776 cystathionine gamma-s 99.9 3E-20 6.6E-25 193.8 30.8 277 176-503 65-392 (405)
155 PRK06358 threonine-phosphate d 99.9 1.5E-20 3.3E-25 193.8 28.1 283 175-499 58-353 (354)
156 PRK08861 cystathionine gamma-s 99.9 2E-20 4.3E-25 193.6 28.7 284 166-504 52-386 (388)
157 PRK05166 histidinol-phosphate 99.9 1.3E-20 2.9E-25 195.5 27.3 286 175-499 75-369 (371)
158 PRK08064 cystathionine beta-ly 99.9 1.8E-20 3.8E-25 195.2 28.0 285 165-507 52-388 (390)
159 TIGR03538 DapC_gpp succinyldia 99.9 4.3E-20 9.3E-25 193.3 30.8 317 146-498 44-392 (393)
160 PRK09064 5-aminolevulinate syn 99.9 2.1E-20 4.6E-25 196.5 28.5 297 170-503 90-399 (407)
161 PRK13034 serine hydroxymethylt 99.9 2.7E-20 5.9E-25 195.4 28.8 298 167-500 70-391 (416)
162 COG0079 HisC Histidinol-phosph 99.9 4E-20 8.7E-25 188.6 29.1 285 175-501 61-354 (356)
163 PRK06767 methionine gamma-lyas 99.9 1.3E-20 2.8E-25 196.1 26.0 281 166-501 60-385 (386)
164 PRK13580 serine hydroxymethylt 99.9 1E-19 2.2E-24 189.5 32.3 311 166-502 90-446 (493)
165 PRK08134 O-acetylhomoserine am 99.9 6.2E-20 1.3E-24 192.6 30.9 292 166-503 63-429 (433)
166 cd00614 CGS_like CGS_like: Cys 99.9 2.5E-20 5.4E-25 193.1 27.2 280 165-499 38-368 (369)
167 TIGR01329 cysta_beta_ly_E cyst 99.9 1.5E-20 3.4E-25 194.8 25.6 276 174-501 50-375 (378)
168 PRK09148 aminotransferase; Val 99.9 2.1E-19 4.5E-24 188.7 34.2 309 161-505 62-394 (405)
169 PRK09028 cystathionine beta-ly 99.9 4E-20 8.6E-25 191.2 28.2 283 166-504 60-390 (394)
170 PRK06855 aminotransferase; Val 99.9 9.5E-20 2.1E-24 192.7 31.1 312 160-502 66-430 (433)
171 PLN02231 alanine transaminase 99.9 3.8E-19 8.3E-24 191.3 35.7 312 160-504 161-530 (534)
172 TIGR01366 serC_3 phosphoserine 99.9 2.1E-20 4.5E-25 192.8 24.7 301 166-502 36-361 (361)
173 PRK05968 hypothetical protein; 99.9 3E-20 6.5E-25 193.4 26.0 275 176-502 68-387 (389)
174 COG2008 GLY1 Threonine aldolas 99.9 8.6E-21 1.9E-25 185.8 20.4 293 163-499 31-341 (342)
175 PRK07504 O-succinylhomoserine 99.9 8.9E-20 1.9E-24 190.3 29.5 278 176-503 70-397 (398)
176 PLN03226 serine hydroxymethylt 99.9 9E-20 2E-24 193.2 29.9 312 167-503 76-421 (475)
177 PLN02271 serine hydroxymethylt 99.9 1.1E-19 2.3E-24 189.9 29.7 312 165-500 188-539 (586)
178 PRK07908 hypothetical protein; 99.9 8.7E-20 1.9E-24 188.0 28.5 278 175-500 62-346 (349)
179 PRK08249 cystathionine gamma-s 99.9 8.1E-20 1.8E-24 190.3 28.3 286 164-504 61-396 (398)
180 PRK13393 5-aminolevulinate syn 99.9 1.3E-19 2.9E-24 190.4 30.0 294 171-502 90-397 (406)
181 PRK08045 cystathionine gamma-s 99.9 1.1E-19 2.3E-24 188.7 28.8 282 167-503 52-384 (386)
182 cd00615 Orn_deC_like Ornithine 99.9 4E-21 8.6E-26 192.9 17.5 227 172-429 60-294 (294)
183 PRK07050 cystathionine beta-ly 99.9 4.6E-20 1E-24 192.0 25.8 282 166-502 64-392 (394)
184 PRK13238 tnaA tryptophanase/L- 99.9 3.4E-19 7.3E-24 188.5 32.6 310 161-501 72-433 (460)
185 PRK07811 cystathionine gamma-s 99.9 8.9E-20 1.9E-24 189.8 27.8 279 167-500 61-387 (388)
186 TIGR01328 met_gam_lyase methio 99.9 5.7E-20 1.2E-24 191.3 26.4 282 166-501 58-390 (391)
187 PRK06425 histidinol-phosphate 99.9 1.5E-19 3.4E-24 184.7 29.1 278 174-499 43-331 (332)
188 PF00155 Aminotran_1_2: Aminot 99.9 2.9E-20 6.4E-25 192.4 23.8 302 160-495 37-363 (363)
189 PRK04781 histidinol-phosphate 99.9 2.5E-19 5.3E-24 185.5 30.3 286 174-499 62-361 (364)
190 PRK11658 UDP-4-amino-4-deoxy-L 99.9 2.5E-19 5.5E-24 186.2 30.1 300 166-499 32-377 (379)
191 PRK03321 putative aminotransfe 99.9 5.5E-20 1.2E-24 189.6 24.7 285 175-500 61-350 (352)
192 PRK08637 hypothetical protein; 99.9 2.6E-19 5.7E-24 187.0 30.0 333 144-502 21-387 (388)
193 PRK06234 methionine gamma-lyas 99.9 9.3E-20 2E-24 190.4 26.4 283 165-502 62-398 (400)
194 PRK08175 aminotransferase; Val 99.9 6.6E-19 1.4E-23 184.4 32.8 307 160-501 60-389 (395)
195 PLN02509 cystathionine beta-ly 99.9 1.7E-19 3.7E-24 189.7 28.3 276 173-500 135-460 (464)
196 PLN02242 methionine gamma-lyas 99.9 1.1E-19 2.4E-24 190.3 26.8 283 166-502 75-416 (418)
197 PRK08153 histidinol-phosphate 99.9 2.4E-19 5.3E-24 185.9 29.2 287 175-503 71-367 (369)
198 COG1103 Archaea-specific pyrid 99.9 6.4E-19 1.4E-23 164.0 28.4 291 179-502 69-381 (382)
199 PRK08574 cystathionine gamma-s 99.9 1.1E-19 2.3E-24 188.7 26.3 280 166-501 52-384 (385)
200 PRK08114 cystathionine beta-ly 99.9 1.8E-19 4E-24 185.7 27.7 286 161-502 56-394 (395)
201 PRK08248 O-acetylhomoserine am 99.9 4.3E-19 9.4E-24 186.3 30.9 294 165-503 62-429 (431)
202 TIGR01324 cysta_beta_ly_B cyst 99.9 2.7E-19 5.8E-24 185.0 28.7 281 165-501 48-376 (377)
203 COG0156 BioF 7-keto-8-aminopel 99.9 1.5E-19 3.3E-24 183.9 26.4 315 144-498 58-387 (388)
204 PLN03227 serine palmitoyltrans 99.9 5.8E-19 1.3E-23 184.0 30.7 324 144-503 17-384 (392)
205 TIGR03588 PseC UDP-4-keto-6-de 99.9 4.6E-19 1E-23 184.7 29.9 291 176-499 34-380 (380)
206 PRK05613 O-acetylhomoserine am 99.9 3.3E-19 7.2E-24 187.0 28.7 287 175-501 73-436 (437)
207 PRK08247 cystathionine gamma-s 99.9 2.2E-19 4.8E-24 185.6 26.7 279 167-501 52-364 (366)
208 PRK07812 O-acetylhomoserine am 99.9 1.1E-18 2.4E-23 183.0 32.1 295 166-504 68-434 (436)
209 COG0399 WecE Predicted pyridox 99.9 1E-18 2.2E-23 176.6 30.3 311 151-500 20-372 (374)
210 TIGR02080 O_succ_thio_ly O-suc 99.8 5.5E-19 1.2E-23 183.2 29.0 280 166-500 50-380 (382)
211 PRK14808 histidinol-phosphate 99.8 7.7E-19 1.7E-23 179.7 29.7 268 176-497 61-333 (335)
212 TIGR01325 O_suc_HS_sulf O-succ 99.8 3.8E-19 8.3E-24 184.7 27.8 273 175-498 58-379 (380)
213 PRK07503 methionine gamma-lyas 99.8 3.4E-19 7.4E-24 186.2 27.4 283 166-503 64-398 (403)
214 PRK06460 hypothetical protein; 99.8 7.3E-19 1.6E-23 182.2 29.1 281 165-502 43-375 (376)
215 PTZ00376 aspartate aminotransf 99.8 3.2E-19 7E-24 187.3 26.7 324 144-500 48-402 (404)
216 COG1167 ARO8 Transcriptional r 99.8 7.9E-19 1.7E-23 186.1 29.9 310 161-503 126-457 (459)
217 PRK07810 O-succinylhomoserine 99.8 4.9E-19 1.1E-23 184.8 27.8 279 165-499 68-402 (403)
218 PRK09257 aromatic amino acid a 99.8 4.8E-19 1E-23 185.5 27.9 319 146-498 47-395 (396)
219 PRK07671 cystathionine beta-ly 99.8 7.9E-19 1.7E-23 181.8 28.9 278 166-499 49-376 (377)
220 KOG2862 Alanine-glyoxylate ami 99.8 2E-18 4.3E-23 163.9 28.7 328 144-501 28-382 (385)
221 PRK06959 putative threonine-ph 99.8 1.2E-18 2.6E-23 178.5 29.1 275 174-504 56-336 (339)
222 PRK05939 hypothetical protein; 99.8 1.7E-18 3.6E-23 180.3 30.0 293 164-500 44-395 (397)
223 PRK06176 cystathionine gamma-s 99.8 1.1E-18 2.3E-23 181.0 28.3 281 166-502 49-379 (380)
224 PRK09440 avtA valine--pyruvate 99.8 1.4E-18 3.1E-23 183.2 29.8 311 162-504 69-414 (416)
225 PRK07269 cystathionine gamma-s 99.8 3.3E-19 7.2E-24 183.6 23.9 278 165-500 52-363 (364)
226 PRK05839 hypothetical protein; 99.8 1.8E-18 3.9E-23 179.7 29.6 310 146-500 40-373 (374)
227 PLN02672 methionine S-methyltr 99.8 2.1E-18 4.5E-23 194.0 32.1 302 171-500 734-1079(1082)
228 PLN02955 8-amino-7-oxononanoat 99.8 8.9E-19 1.9E-23 182.4 27.1 335 130-503 107-463 (476)
229 PRK07582 cystathionine gamma-l 99.8 6.2E-19 1.3E-23 182.1 25.6 275 166-501 50-365 (366)
230 PRK03244 argD acetylornithine 99.8 2.2E-18 4.9E-23 180.7 30.1 287 174-503 88-396 (398)
231 PRK05994 O-acetylhomoserine am 99.8 1.7E-18 3.7E-23 182.0 29.2 285 176-500 68-425 (427)
232 TIGR01140 L_thr_O3P_dcar L-thr 99.8 7.3E-19 1.6E-23 179.6 25.5 270 174-496 50-330 (330)
233 PRK06702 O-acetylhomoserine am 99.8 2.7E-18 5.9E-23 179.1 29.5 296 166-505 60-428 (432)
234 PRK07590 L,L-diaminopimelate a 99.8 5.1E-18 1.1E-22 178.5 31.9 303 161-498 70-408 (409)
235 PRK03967 histidinol-phosphate 99.8 4.5E-18 9.7E-23 174.3 30.3 271 175-500 59-333 (337)
236 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 2.1E-19 4.5E-24 184.1 20.2 237 172-439 67-329 (417)
237 PRK05967 cystathionine beta-ly 99.8 2.3E-18 4.9E-23 177.8 28.0 282 166-503 63-393 (395)
238 PRK05664 threonine-phosphate d 99.8 3.6E-18 7.8E-23 174.4 29.2 271 175-501 53-328 (330)
239 PRK06084 O-acetylhomoserine am 99.8 5.5E-18 1.2E-22 177.9 30.7 292 166-502 57-423 (425)
240 PRK07865 N-succinyldiaminopime 99.8 3.1E-18 6.7E-23 177.4 28.4 288 162-496 57-363 (364)
241 PRK10534 L-threonine aldolase; 99.8 1.2E-18 2.5E-23 178.4 24.8 289 163-499 30-331 (333)
242 PRK14809 histidinol-phosphate 99.8 3.6E-18 7.8E-23 176.5 28.3 279 175-500 69-356 (357)
243 PLN02368 alanine transaminase 99.8 2.8E-18 6.1E-23 179.2 27.3 256 160-447 100-393 (407)
244 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 5.8E-18 1.3E-22 177.9 29.6 284 175-499 61-417 (418)
245 PRK07392 threonine-phosphate d 99.8 5.4E-18 1.2E-22 175.4 29.0 283 175-499 61-357 (360)
246 PRK15029 arginine decarboxylas 99.8 4.3E-18 9.2E-23 186.4 28.4 301 172-502 206-605 (755)
247 KOG2040 Glycine dehydrogenase 99.8 8.2E-18 1.8E-22 172.6 28.2 374 103-504 513-921 (1001)
248 KOG1368 Threonine aldolase [Am 99.8 8.6E-19 1.9E-23 165.3 19.5 296 165-501 54-369 (384)
249 COG3844 Kynureninase [Amino ac 99.8 5.4E-18 1.2E-22 162.0 23.9 307 166-503 71-404 (407)
250 TIGR03539 DapC_actino succinyl 99.8 8.5E-18 1.8E-22 173.7 27.7 289 162-495 51-356 (357)
251 PRK09275 aspartate aminotransf 99.8 8.4E-18 1.8E-22 178.8 28.2 322 162-504 129-520 (527)
252 cd00617 Tnase_like Tryptophana 99.8 1.3E-17 2.7E-22 174.3 28.8 312 161-503 47-410 (431)
253 TIGR03576 pyridox_MJ0158 pyrid 99.8 1.3E-17 2.7E-22 170.8 27.6 281 169-499 52-345 (346)
254 COG2873 MET17 O-acetylhomoseri 99.8 2E-17 4.2E-22 161.3 27.3 297 159-501 54-425 (426)
255 PLN02397 aspartate transaminas 99.8 1E-17 2.2E-22 176.6 27.5 317 145-500 68-420 (423)
256 TIGR03542 DAPAT_plant LL-diami 99.8 4.4E-17 9.6E-22 171.0 32.0 302 163-498 71-401 (402)
257 PRK04311 selenocysteine syntha 99.8 6.7E-17 1.5E-21 170.2 33.2 293 174-500 130-463 (464)
258 COG4992 ArgD Ornithine/acetylo 99.8 3E-17 6.5E-22 164.2 28.8 290 175-504 88-401 (404)
259 PRK00854 rocD ornithine--oxo-a 99.8 3.4E-17 7.3E-22 172.0 30.9 289 173-500 85-400 (401)
260 PRK07505 hypothetical protein; 99.8 1.8E-17 3.8E-22 174.1 28.7 299 169-501 89-399 (402)
261 TIGR03801 asp_4_decarbox aspar 99.8 2.7E-17 5.9E-22 174.7 29.7 317 169-504 131-519 (521)
262 TIGR02379 ECA_wecE TDP-4-keto- 99.8 3.3E-17 7.2E-22 169.7 29.5 298 174-499 34-375 (376)
263 PRK13578 ornithine decarboxyla 99.8 1.1E-17 2.4E-22 181.4 26.7 309 173-504 176-568 (720)
264 PF01041 DegT_DnrJ_EryC1: DegT 99.8 3E-17 6.6E-22 169.8 29.0 269 166-467 24-306 (363)
265 cd00610 OAT_like Acetyl ornith 99.8 2.1E-17 4.5E-22 174.2 27.6 296 170-498 78-412 (413)
266 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 2.3E-17 5E-22 169.8 26.1 281 164-500 52-386 (386)
267 PRK04073 rocD ornithine--oxo-a 99.8 1.2E-16 2.6E-21 167.4 30.7 288 174-499 85-395 (396)
268 KOG0256 1-aminocyclopropane-1- 99.8 4.4E-17 9.6E-22 160.2 25.3 304 166-500 120-460 (471)
269 PRK01278 argD acetylornithine 99.8 1.2E-16 2.5E-21 167.2 30.1 291 173-501 75-388 (389)
270 TIGR00474 selA seryl-tRNA(sec) 99.8 2.4E-16 5.2E-21 165.5 31.9 288 174-495 125-453 (454)
271 PRK08354 putative aminotransfe 99.8 1.6E-16 3.5E-21 160.9 29.7 255 176-498 45-309 (311)
272 PRK06434 cystathionine gamma-l 99.8 3.7E-17 8.1E-22 168.7 24.5 278 164-500 61-383 (384)
273 TIGR00707 argD acetylornithine 99.8 8.9E-17 1.9E-21 167.5 27.3 294 171-498 69-378 (379)
274 TIGR03246 arg_catab_astC succi 99.8 2.3E-16 5E-21 165.1 30.3 292 173-502 79-396 (397)
275 PRK07049 methionine gamma-lyas 99.8 1.6E-16 3.4E-21 167.1 29.0 279 167-500 83-425 (427)
276 cd01494 AAT_I Aspartate aminot 99.8 6.8E-18 1.5E-22 154.4 16.0 163 175-360 4-170 (170)
277 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 2.2E-16 4.7E-21 164.1 29.2 263 173-466 33-315 (375)
278 PTZ00125 ornithine aminotransf 99.8 3.2E-16 6.9E-21 164.5 30.4 297 172-505 74-399 (400)
279 PRK15407 lipopolysaccharide bi 99.8 3.2E-16 7E-21 165.1 30.0 299 175-500 67-435 (438)
280 PRK15399 lysine decarboxylase 99.8 5.5E-16 1.2E-20 168.1 31.7 296 173-501 197-559 (713)
281 PRK02627 acetylornithine amino 99.8 4.9E-16 1.1E-20 162.8 30.3 297 170-502 80-395 (396)
282 PRK15400 lysine decarboxylase 99.8 2.2E-16 4.8E-21 171.1 27.3 296 173-501 197-559 (714)
283 COG0626 MetC Cystathionine bet 99.8 4.4E-16 9.6E-21 158.4 27.5 285 164-502 60-395 (396)
284 COG0112 GlyA Glycine/serine hy 99.7 8.2E-16 1.8E-20 151.7 25.3 302 164-502 65-391 (413)
285 PF00464 SHMT: Serine hydroxym 99.7 1.7E-16 3.8E-21 162.0 21.2 293 166-492 61-396 (399)
286 TIGR01365 serC_2 phosphoserine 99.7 5.3E-16 1.2E-20 159.1 24.9 320 144-499 15-371 (374)
287 PRK05093 argD bifunctional N-s 99.7 3E-15 6.6E-20 157.1 31.1 293 174-502 85-401 (403)
288 PRK03715 argD acetylornithine 99.7 3.1E-15 6.7E-20 156.0 30.8 297 170-502 77-394 (395)
289 PLN02452 phosphoserine transam 99.7 9.5E-16 2.1E-20 157.3 25.8 301 166-501 47-363 (365)
290 PRK02936 argD acetylornithine 99.7 1.6E-15 3.5E-20 157.9 26.9 283 170-498 70-376 (377)
291 PRK12381 bifunctional succinyl 99.7 4.5E-15 9.7E-20 155.9 30.1 294 173-505 83-403 (406)
292 PRK05964 adenosylmethionine--8 99.7 2.1E-15 4.5E-20 159.2 27.5 302 171-502 85-423 (423)
293 TIGR01885 Orn_aminotrans ornit 99.7 5.9E-15 1.3E-19 154.9 30.1 291 172-499 80-400 (401)
294 PLN02624 ornithine-delta-amino 99.7 9.6E-15 2.1E-19 155.8 31.4 289 173-501 119-444 (474)
295 KOG1358 Serine palmitoyltransf 99.7 3.2E-15 7E-20 146.3 22.1 320 144-501 113-465 (467)
296 TIGR02618 tyr_phenol_ly tyrosi 99.7 4.5E-15 9.9E-20 152.8 24.0 309 163-503 67-428 (450)
297 KOG1359 Glycine C-acetyltransf 99.7 5.9E-15 1.3E-19 139.2 20.4 328 130-503 72-414 (417)
298 PRK05965 hypothetical protein; 99.7 5.2E-14 1.1E-18 149.4 30.0 313 171-508 90-454 (459)
299 PRK11522 putrescine--2-oxoglut 99.7 3.8E-14 8.3E-19 150.1 28.6 295 171-504 124-454 (459)
300 COG0160 GabT 4-aminobutyrate a 99.7 1.3E-13 2.7E-18 142.3 31.4 294 173-502 101-446 (447)
301 TIGR03372 putres_am_tran putre 99.7 7E-14 1.5E-18 147.1 29.5 288 172-499 118-442 (442)
302 PLN02760 4-aminobutyrate:pyruv 99.7 6.6E-14 1.4E-18 149.7 29.6 308 170-503 132-493 (504)
303 PLN00144 acetylornithine trans 99.7 2.4E-13 5.2E-18 141.4 32.8 294 172-502 58-381 (382)
304 KOG1360 5-aminolevulinate synt 99.7 2.4E-14 5.2E-19 140.2 23.3 302 168-504 213-527 (570)
305 PRK04260 acetylornithine amino 99.7 7.5E-14 1.6E-18 145.2 28.5 268 198-498 88-374 (375)
306 PRK06541 hypothetical protein; 99.6 1.3E-13 2.8E-18 146.3 29.7 303 172-504 96-458 (460)
307 KOG0053 Cystathionine beta-lya 99.6 3.3E-14 7.2E-19 142.9 23.1 281 167-502 77-407 (409)
308 PRK07482 hypothetical protein; 99.6 1.4E-13 3E-18 146.3 28.5 308 170-503 93-456 (461)
309 PRK12462 phosphoserine aminotr 99.6 9.8E-14 2.1E-18 141.0 26.0 301 166-501 44-362 (364)
310 PRK08117 4-aminobutyrate amino 99.6 1.6E-13 3.5E-18 145.3 28.5 297 171-503 86-431 (433)
311 COG1982 LdcC Arginine/lysine/o 99.6 5.3E-14 1.1E-18 147.0 24.1 294 174-496 73-403 (557)
312 COG3977 Alanine-alpha-ketoisov 99.6 1.4E-13 3.1E-18 130.4 24.5 312 158-504 65-414 (417)
313 KOG0634 Aromatic amino acid am 99.6 4.4E-13 9.6E-18 133.4 28.9 320 161-503 94-468 (472)
314 PRK13360 omega amino acid--pyr 99.6 4.2E-13 9.1E-18 141.9 29.9 305 172-502 90-441 (442)
315 TIGR02407 ectoine_ectB diamino 99.6 7.6E-13 1.6E-17 139.0 30.4 297 171-501 78-412 (412)
316 PRK13237 tyrosine phenol-lyase 99.6 3E-13 6.5E-18 139.8 26.6 309 163-503 74-435 (460)
317 PRK09221 beta alanine--pyruvat 99.6 5.5E-13 1.2E-17 141.1 29.3 304 173-502 94-444 (445)
318 PRK07678 aminotransferase; Val 99.6 5.1E-13 1.1E-17 141.7 29.0 300 172-502 90-450 (451)
319 PRK06943 adenosylmethionine--8 99.6 5.4E-13 1.2E-17 141.3 28.8 304 172-503 98-448 (453)
320 PRK04612 argD acetylornithine 99.6 6.3E-13 1.4E-17 139.1 28.8 294 173-504 84-406 (408)
321 PRK06105 aminotransferase; Pro 99.6 6.2E-13 1.3E-17 141.3 28.4 305 171-504 92-452 (460)
322 PRK06058 4-aminobutyrate amino 99.6 1.2E-12 2.5E-17 138.9 30.2 297 171-502 99-443 (443)
323 PRK09264 diaminobutyrate--2-ox 99.6 1.7E-12 3.8E-17 136.9 31.3 303 171-506 82-421 (425)
324 COG0161 BioA Adenosylmethionin 99.6 4.6E-13 9.9E-18 137.3 25.8 329 144-505 65-447 (449)
325 PRK08360 4-aminobutyrate amino 99.6 1.6E-12 3.5E-17 137.4 31.0 296 171-503 84-428 (443)
326 PRK12403 putative aminotransfe 99.6 7.9E-13 1.7E-17 140.5 28.7 302 170-503 97-454 (460)
327 PF01212 Beta_elim_lyase: Beta 99.6 1.7E-15 3.7E-20 150.4 7.5 240 163-442 25-281 (290)
328 COG0001 HemL Glutamate-1-semia 99.6 5.1E-13 1.1E-17 135.4 25.3 293 168-504 90-431 (432)
329 PRK07495 4-aminobutyrate amino 99.6 3.2E-12 7E-17 134.6 32.5 296 172-504 84-424 (425)
330 PRK05769 4-aminobutyrate amino 99.6 2.2E-12 4.8E-17 136.4 31.2 294 171-502 97-440 (441)
331 PRK08742 adenosylmethionine--8 99.6 1E-12 2.3E-17 139.5 28.7 302 173-503 109-469 (472)
332 PRK08593 4-aminobutyrate amino 99.6 1.9E-12 4.1E-17 137.1 30.2 298 171-504 85-432 (445)
333 PRK09792 4-aminobutyrate trans 99.6 1.2E-12 2.6E-17 137.8 28.4 293 172-500 84-420 (421)
334 PRK07480 putative aminotransfe 99.6 9.6E-13 2.1E-17 139.6 27.7 302 171-504 94-451 (456)
335 PRK07036 hypothetical protein; 99.6 1.7E-12 3.8E-17 138.0 29.4 308 171-504 95-455 (466)
336 PRK06173 adenosylmethionine--8 99.6 1.6E-12 3.5E-17 136.7 28.7 303 172-502 88-426 (429)
337 PRK06062 hypothetical protein; 99.6 1.1E-12 2.5E-17 138.9 27.8 296 171-504 95-448 (451)
338 TIGR00709 dat 2,4-diaminobutyr 99.6 2.1E-12 4.5E-17 136.9 29.5 298 171-504 82-438 (442)
339 KOG1402 Ornithine aminotransfe 99.6 1.7E-12 3.6E-17 124.7 25.3 294 171-500 101-426 (427)
340 PRK07030 adenosylmethionine--8 99.6 2.3E-12 5E-17 136.9 29.5 306 171-502 90-447 (466)
341 PRK05630 adenosylmethionine--8 99.6 1.5E-12 3.3E-17 136.8 27.4 299 173-501 85-420 (422)
342 PRK05639 4-aminobutyrate amino 99.6 2.8E-12 6E-17 136.0 29.0 295 172-503 97-445 (457)
343 PRK08088 4-aminobutyrate amino 99.6 1.4E-12 3.1E-17 137.8 26.7 295 174-502 87-424 (425)
344 PRK07481 hypothetical protein; 99.6 3.9E-12 8.4E-17 134.9 29.4 307 171-502 86-446 (449)
345 TIGR00713 hemL glutamate-1-sem 99.5 1.5E-12 3.3E-17 137.6 26.2 289 174-501 91-422 (423)
346 PF05889 SLA_LP_auto_ag: Solub 99.5 5.9E-13 1.3E-17 133.4 21.1 301 171-500 56-389 (389)
347 PRK07483 hypothetical protein; 99.5 3.5E-12 7.5E-17 134.9 28.2 306 172-504 74-440 (443)
348 PRK07986 adenosylmethionine--8 99.5 2.9E-12 6.2E-17 134.8 27.4 302 172-501 87-423 (428)
349 PRK06082 4-aminobutyrate amino 99.5 4.2E-12 9.2E-17 134.8 28.7 298 171-505 113-455 (459)
350 PRK06917 hypothetical protein; 99.5 1E-11 2.2E-16 131.6 30.9 310 171-507 74-443 (447)
351 PRK06938 diaminobutyrate--2-ox 99.5 5.2E-12 1.1E-16 134.2 28.7 294 173-503 108-462 (464)
352 PRK06916 adenosylmethionine--8 99.5 3.6E-12 7.7E-17 135.5 27.5 304 171-503 99-457 (460)
353 TIGR00700 GABAtrnsam 4-aminobu 99.5 7.9E-12 1.7E-16 131.8 29.4 289 173-500 78-419 (420)
354 PRK06777 4-aminobutyrate amino 99.5 1.9E-11 4E-16 128.9 31.5 290 174-499 86-419 (421)
355 PRK04013 argD acetylornithine/ 99.5 7.4E-12 1.6E-16 128.8 27.5 271 174-503 69-362 (364)
356 KOG2040 Glycine dehydrogenase 99.5 9.6E-13 2.1E-17 135.8 20.1 369 82-496 77-478 (1001)
357 PRK06918 4-aminobutyrate amino 99.5 2.6E-11 5.6E-16 129.0 31.1 296 171-505 97-447 (451)
358 KOG2467 Glycine/serine hydroxy 99.5 1.8E-11 3.8E-16 119.3 26.2 308 168-500 83-425 (477)
359 PRK12389 glutamate-1-semialdeh 99.5 3.5E-11 7.5E-16 127.1 30.6 285 172-501 94-427 (428)
360 TIGR00508 bioA adenosylmethion 99.5 2.2E-11 4.7E-16 128.5 28.5 301 173-501 90-426 (427)
361 PRK06931 diaminobutyrate--2-ox 99.5 2.1E-11 4.6E-16 129.5 28.1 298 171-503 101-456 (459)
362 PLN02482 glutamate-1-semialdeh 99.5 1.7E-11 3.7E-16 130.1 26.3 286 171-502 139-474 (474)
363 PRK00062 glutamate-1-semialdeh 99.5 2.5E-11 5.5E-16 128.2 26.7 290 171-502 90-425 (426)
364 PRK00615 glutamate-1-semialdeh 99.4 6.4E-11 1.4E-15 124.7 28.3 290 172-502 94-429 (433)
365 PRK08297 L-lysine aminotransfe 99.4 3.6E-11 7.7E-16 127.3 25.9 299 173-502 94-442 (443)
366 PRK06148 hypothetical protein; 99.4 7.7E-11 1.7E-15 136.1 28.6 299 171-503 663-1012(1013)
367 TIGR00699 GABAtrns_euk 4-amino 99.4 1.1E-10 2.5E-15 123.2 27.5 295 169-499 103-464 (464)
368 PRK07046 aminotransferase; Val 99.4 1.9E-10 4.2E-15 121.9 29.4 292 170-503 114-452 (453)
369 PRK06149 hypothetical protein; 99.4 1.4E-10 3.1E-15 133.8 29.5 296 172-501 625-970 (972)
370 KOG0258 Alanine aminotransfera 99.4 5.5E-10 1.2E-14 110.0 28.9 318 159-503 105-471 (475)
371 KOG0633 Histidinol phosphate a 99.4 8.5E-12 1.8E-16 116.2 15.4 271 194-498 88-374 (375)
372 KOG3846 L-kynurenine hydrolase 99.4 5.2E-11 1.1E-15 113.4 20.9 304 175-503 115-463 (465)
373 PF12897 Aminotran_MocR: Alani 99.4 4.2E-10 9.2E-15 111.6 27.3 301 175-501 73-415 (425)
374 COG1448 TyrB Aspartate/tyrosin 99.4 1.1E-10 2.4E-15 115.5 21.4 339 133-498 34-395 (396)
375 TIGR03251 LAT_fam L-lysine 6-t 99.3 4.1E-10 8.9E-15 119.0 24.8 292 175-497 89-430 (431)
376 PLN02974 adenosylmethionine-8- 99.3 8.7E-10 1.9E-14 123.3 27.3 215 264-499 567-816 (817)
377 KOG1401 Acetylornithine aminot 99.3 2E-09 4.3E-14 107.1 24.6 297 178-503 105-432 (433)
378 TIGR02617 tnaA_trp_ase tryptop 99.2 8.3E-10 1.8E-14 113.1 20.9 311 163-503 70-443 (467)
379 PRK06209 glutamate-1-semialdeh 99.2 2.1E-09 4.6E-14 113.6 24.8 288 171-504 88-408 (431)
380 KOG1404 Alanine-glyoxylate ami 99.2 1E-09 2.2E-14 108.4 18.6 286 176-495 97-432 (442)
381 PF00202 Aminotran_3: Aminotra 99.1 5E-09 1.1E-13 107.2 19.1 228 173-430 61-316 (339)
382 COG3033 TnaA Tryptophanase [Am 99.1 1.1E-08 2.3E-13 100.0 19.6 308 165-502 74-445 (471)
383 COG1921 SelA Selenocysteine sy 99.1 7.6E-09 1.6E-13 104.2 17.7 176 197-406 86-271 (395)
384 PF03841 SelA: L-seryl-tRNA se 99.0 5E-10 1.1E-14 111.7 5.3 221 176-430 52-296 (367)
385 PF06838 Met_gamma_lyase: Meth 99.0 2.5E-08 5.5E-13 98.5 16.6 255 168-463 55-333 (403)
386 COG1932 SerC Phosphoserine ami 98.8 5.4E-07 1.2E-11 89.2 21.0 300 167-501 46-363 (365)
387 KOG3843 Predicted serine hydro 98.6 2.4E-07 5.2E-12 87.0 9.0 330 170-529 56-427 (432)
388 KOG1412 Aspartate aminotransfe 98.6 9.7E-06 2.1E-10 78.2 19.8 295 183-504 87-408 (410)
389 KOG0630 Predicted pyridoxal-de 98.5 7.3E-06 1.6E-10 83.3 16.8 196 226-438 231-441 (838)
390 COG4100 Cystathionine beta-lya 98.4 8.6E-06 1.9E-10 78.2 15.1 145 179-347 73-234 (416)
391 KOG1411 Aspartate aminotransfe 98.4 6.3E-06 1.4E-10 80.6 13.1 282 198-500 124-424 (427)
392 PF04864 Alliinase_C: Allinase 98.2 1.3E-05 2.8E-10 79.1 12.2 262 198-498 70-362 (363)
393 KOG1403 Predicted alanine-glyo 98.1 0.00018 3.8E-09 69.3 16.4 279 198-502 106-438 (452)
394 KOG2790 Phosphoserine aminotra 98.1 0.00082 1.8E-08 64.4 20.4 328 144-500 19-367 (370)
395 KOG1405 4-aminobutyrate aminot 97.9 0.00056 1.2E-08 67.4 15.9 209 262-501 254-483 (484)
396 PLN02994 1-aminocyclopropane-1 96.3 0.035 7.5E-07 49.8 9.9 60 164-237 89-152 (153)
397 COG0296 GlgB 1,4-alpha-glucan 70.7 3.5 7.6E-05 45.3 3.1 40 277-316 201-240 (628)
398 TIGR03573 WbuX N-acetyl sugar 66.8 65 0.0014 33.0 11.3 101 196-313 62-170 (343)
399 COG2515 Acd 1-aminocyclopropan 65.7 62 0.0014 32.2 10.1 133 168-315 48-192 (323)
400 COG1954 GlpP Glycerol-3-phosph 61.5 13 0.00028 33.5 4.3 47 262-313 12-60 (181)
401 cd01018 ZntC Metal binding pro 60.0 95 0.0021 30.4 10.7 66 235-308 176-245 (266)
402 cd01455 vWA_F11C1-5a_type Von 59.7 20 0.00044 33.3 5.4 39 273-311 112-150 (191)
403 COG0031 CysK Cysteine synthase 59.6 31 0.00067 34.4 7.0 80 198-284 66-147 (300)
404 COG1184 GCD2 Translation initi 56.9 92 0.002 31.1 9.8 98 198-310 123-228 (301)
405 PF01297 TroA: Periplasmic sol 56.5 1.4E+02 0.0031 28.9 11.3 130 159-307 91-226 (256)
406 COG2102 Predicted ATPases of P 56.1 1E+02 0.0022 29.3 9.4 97 198-307 5-116 (223)
407 PLN02556 cysteine synthase/L-3 54.5 1E+02 0.0022 31.9 10.2 83 198-287 115-197 (368)
408 PF02603 Hpr_kinase_N: HPr Ser 53.4 19 0.0004 31.1 3.9 41 264-310 72-112 (127)
409 cd01020 TroA_b Metal binding p 53.3 1.4E+02 0.003 29.2 10.6 69 235-307 159-236 (264)
410 PLN03013 cysteine synthase 52.4 52 0.0011 34.8 7.7 81 198-285 179-259 (429)
411 PF05368 NmrA: NmrA-like famil 51.6 81 0.0018 29.8 8.6 73 230-308 27-99 (233)
412 COG2185 Sbm Methylmalonyl-CoA 48.3 73 0.0016 28.1 6.7 75 226-305 12-93 (143)
413 smart00642 Aamy Alpha-amylase 47.2 17 0.00038 32.9 2.9 28 285-312 65-92 (166)
414 TIGR01138 cysM cysteine syntha 46.7 1.3E+02 0.0028 29.9 9.3 52 198-256 63-114 (290)
415 KOG1465 Translation initiation 45.6 3.3E+02 0.007 27.3 14.0 100 198-311 166-272 (353)
416 TIGR00288 conserved hypothetic 44.4 1.5E+02 0.0032 26.7 8.3 78 228-311 60-137 (160)
417 cd01017 AdcA Metal binding pro 44.2 3.2E+02 0.007 26.9 12.9 67 234-307 176-247 (282)
418 cd01137 PsaA Metal binding pro 44.1 3.3E+02 0.0072 27.0 11.9 65 235-306 183-252 (287)
419 PF13407 Peripla_BP_4: Peripla 43.8 1E+02 0.0022 29.4 8.0 65 239-308 20-85 (257)
420 TIGR01139 cysK cysteine syntha 43.3 1.7E+02 0.0036 29.2 9.6 52 198-256 61-112 (298)
421 PRK14994 SAM-dependent 16S rib 42.6 1.3E+02 0.0028 29.9 8.5 78 227-308 39-118 (287)
422 cd01422 MGS Methylglyoxal synt 41.5 1.9E+02 0.0042 24.3 8.2 60 246-308 44-106 (115)
423 TIGR00290 MJ0570_dom MJ0570-re 40.9 1.9E+02 0.0042 27.6 9.0 95 198-307 5-115 (223)
424 COG1504 Uncharacterized conser 40.8 62 0.0013 27.0 4.7 52 258-311 46-97 (121)
425 PLN02565 cysteine synthase 40.8 92 0.002 31.6 7.3 51 198-255 71-121 (322)
426 COG2870 RfaE ADP-heptose synth 39.7 73 0.0016 33.1 6.1 81 229-311 94-179 (467)
427 PF01008 IF-2B: Initiation fac 39.6 1.1E+02 0.0024 30.1 7.6 101 198-312 111-219 (282)
428 PLN00011 cysteine synthase 38.0 2.5E+02 0.0053 28.4 9.9 51 198-255 73-123 (323)
429 PRK11761 cysM cysteine synthas 38.0 2.4E+02 0.0052 28.1 9.8 51 198-255 67-117 (296)
430 TIGR00289 conserved hypothetic 37.6 2.2E+02 0.0047 27.2 8.8 101 198-307 5-115 (222)
431 PF00128 Alpha-amylase: Alpha 37.5 20 0.00044 35.3 2.0 32 282-313 44-75 (316)
432 PRK08329 threonine synthase; V 37.4 3.1E+02 0.0068 28.0 10.7 51 198-255 108-158 (347)
433 cd01019 ZnuA Zinc binding prot 36.5 4.3E+02 0.0094 26.1 12.3 66 235-307 185-255 (286)
434 cd01561 CBS_like CBS_like: Thi 36.5 2.4E+02 0.0053 27.8 9.6 52 198-256 57-108 (291)
435 PF04309 G3P_antiterm: Glycero 36.4 11 0.00023 34.6 -0.3 47 262-313 8-56 (175)
436 PRK00509 argininosuccinate syn 36.4 1.2E+02 0.0025 31.8 7.3 103 197-313 6-119 (399)
437 PRK09441 cytoplasmic alpha-amy 35.9 29 0.00063 37.4 2.9 31 283-313 74-104 (479)
438 cd06448 L-Ser-dehyd Serine deh 35.8 3.3E+02 0.0072 27.4 10.4 51 198-255 55-105 (316)
439 PF01765 RRF: Ribosome recycli 35.5 1.2E+02 0.0025 27.5 6.4 50 452-501 56-105 (165)
440 TIGR01536 asn_synth_AEB aspara 35.4 2.9E+02 0.0062 29.5 10.5 127 168-311 234-364 (467)
441 PLN03244 alpha-amylase; Provis 35.0 32 0.00069 38.9 3.0 37 279-315 430-466 (872)
442 COG3453 Uncharacterized protei 34.9 88 0.0019 26.7 4.9 72 233-304 44-127 (130)
443 PRK05234 mgsA methylglyoxal sy 34.9 2.4E+02 0.0051 24.8 8.0 69 241-312 43-115 (142)
444 PRK08535 translation initiatio 34.9 4.2E+02 0.009 26.7 10.9 100 198-311 124-230 (310)
445 cd00520 RRF Ribosome recycling 34.3 2E+02 0.0044 26.4 7.8 50 452-501 70-119 (179)
446 TIGR00496 frr ribosome recycli 34.0 1.7E+02 0.0036 26.9 7.1 49 452-500 65-113 (176)
447 TIGR02402 trehalose_TreZ malto 33.5 32 0.0007 37.6 2.8 34 281-314 151-184 (542)
448 TIGR01136 cysKM cysteine synth 33.0 3.4E+02 0.0074 26.9 10.0 51 198-255 62-112 (299)
449 PRK00083 frr ribosome recyclin 32.4 2E+02 0.0043 26.6 7.4 50 452-501 74-123 (185)
450 TIGR03679 arCOG00187 arCOG0018 31.1 4.5E+02 0.0097 24.9 9.9 94 198-307 2-116 (218)
451 PRK05638 threonine synthase; V 30.9 2.9E+02 0.0062 29.4 9.4 51 198-255 116-166 (442)
452 PF07085 DRTGG: DRTGG domain; 30.6 2.7E+02 0.0058 22.7 7.3 49 249-308 42-90 (105)
453 PF07082 DUF1350: Protein of u 30.4 2E+02 0.0043 27.9 7.2 88 430-524 5-100 (250)
454 PF01902 ATP_bind_4: ATP-bindi 30.1 1.9E+02 0.0041 27.5 7.1 97 198-307 5-115 (218)
455 COG0367 AsnB Asparagine syntha 30.1 2.5E+02 0.0055 30.7 9.0 127 170-315 213-349 (542)
456 PF10087 DUF2325: Uncharacteri 29.7 3E+02 0.0064 22.1 7.4 71 236-310 12-82 (97)
457 PRK09545 znuA high-affinity zi 29.6 5.9E+02 0.013 25.5 12.2 66 235-307 209-279 (311)
458 cd01563 Thr-synth_1 Threonine 28.7 6.1E+02 0.013 25.4 11.2 51 198-255 74-124 (324)
459 TIGR00196 yjeF_cterm yjeF C-te 28.4 2.2E+02 0.0048 27.8 7.6 62 242-311 66-127 (272)
460 PRK05331 putative phosphate ac 28.4 6.5E+02 0.014 25.6 11.5 58 272-344 173-230 (334)
461 KOG3974 Predicted sugar kinase 28.3 56 0.0012 31.8 3.0 50 262-311 91-140 (306)
462 PRK06372 translation initiatio 28.0 5.8E+02 0.012 24.9 11.4 112 171-308 72-190 (253)
463 PRK04527 argininosuccinate syn 27.7 2.6E+02 0.0057 29.3 8.1 101 198-313 7-119 (400)
464 PRK12313 glycogen branching en 27.2 50 0.0011 37.0 3.0 33 282-314 212-244 (633)
465 PLN02672 methionine S-methyltr 27.1 9E+02 0.02 29.1 13.1 142 156-311 414-565 (1082)
466 PRK05402 glycogen branching en 27.0 51 0.0011 37.6 3.0 34 282-315 307-340 (726)
467 TIGR01137 cysta_beta cystathio 26.9 5.3E+02 0.012 27.2 10.8 52 198-256 66-117 (454)
468 KOG1467 Translation initiation 26.6 3E+02 0.0064 29.4 8.1 100 198-311 363-469 (556)
469 cd01991 Asn_Synthase_B_C The C 26.4 4E+02 0.0087 25.6 9.1 104 196-313 18-126 (269)
470 cd02070 corrinoid_protein_B12- 26.3 5.3E+02 0.011 23.9 11.3 130 170-311 32-173 (201)
471 PLN02356 phosphateglycerate ki 26.3 1.7E+02 0.0037 30.9 6.5 49 200-255 110-158 (423)
472 cd01994 Alpha_ANH_like_IV This 26.3 5.3E+02 0.011 23.9 9.9 94 198-307 4-118 (194)
473 COG0329 DapA Dihydrodipicolina 26.2 81 0.0018 31.6 4.0 59 252-310 13-80 (299)
474 PF13380 CoA_binding_2: CoA bi 25.8 1.1E+02 0.0024 25.7 4.3 45 262-313 68-112 (116)
475 TIGR01515 branching_enzym alph 25.7 53 0.0012 36.6 2.9 34 282-315 198-231 (613)
476 cd00640 Trp-synth-beta_II Tryp 25.6 2E+02 0.0044 27.4 6.7 52 198-256 54-105 (244)
477 PRK13724 conjugal transfer pro 25.5 43 0.00094 24.2 1.3 22 519-540 10-31 (65)
478 TIGR00334 5S_RNA_mat_M5 ribonu 25.4 92 0.002 28.4 3.8 54 259-317 10-63 (174)
479 PRK05678 succinyl-CoA syntheta 25.1 1.4E+02 0.0029 29.9 5.3 75 231-313 49-126 (291)
480 PF10894 DUF2689: Protein of u 25.0 41 0.00089 24.1 1.1 22 519-540 10-31 (61)
481 cd01542 PBP1_TreR_like Ligand- 25.0 3E+02 0.0065 26.0 7.8 64 239-309 21-84 (259)
482 TIGR01501 MthylAspMutase methy 25.0 2.3E+02 0.005 24.7 6.1 60 239-304 21-81 (134)
483 TIGR02455 TreS_stutzeri trehal 24.9 61 0.0013 35.9 3.0 78 234-312 74-152 (688)
484 PLN02347 GMP synthetase 24.8 6.8E+02 0.015 27.4 11.0 111 128-257 174-294 (536)
485 PF07373 CAMP_factor: CAMP fac 24.8 98 0.0021 29.4 3.9 35 484-518 126-160 (228)
486 cd06282 PBP1_GntR_like_2 Ligan 24.7 3E+02 0.0064 26.0 7.7 66 239-310 21-87 (266)
487 COG1105 FruK Fructose-1-phosph 24.6 1.6E+02 0.0035 29.6 5.7 54 259-312 109-168 (310)
488 TIGR01285 nifN nitrogenase mol 24.3 6.8E+02 0.015 26.5 10.8 71 229-316 315-386 (432)
489 PRK00074 guaA GMP synthase; Re 23.6 9.6E+02 0.021 26.0 12.7 154 128-312 161-325 (511)
490 PF02310 B12-binding: B12 bind 23.5 3.3E+02 0.007 22.5 6.8 69 239-313 20-91 (121)
491 cd06305 PBP1_methylthioribose_ 23.4 2.9E+02 0.0063 26.3 7.4 68 239-311 21-89 (273)
492 PRK06450 threonine synthase; V 23.3 7.5E+02 0.016 25.1 10.5 51 198-255 101-151 (338)
493 cd00532 MGS-like MGS-like doma 23.2 4.3E+02 0.0093 21.8 8.2 65 244-311 39-107 (112)
494 PRK10717 cysteine synthase A; 22.9 4.2E+02 0.009 26.8 8.6 52 198-256 68-119 (330)
495 cd05126 Mth938 Mth938 domain. 22.8 2.3E+02 0.005 24.0 5.6 50 260-311 45-94 (117)
496 PRK14705 glycogen branching en 22.8 65 0.0014 38.7 2.9 35 281-315 806-840 (1224)
497 PF09840 DUF2067: Uncharacteri 22.6 5.2E+02 0.011 24.0 8.3 118 409-534 47-165 (190)
498 TIGR02104 pulA_typeI pullulana 22.5 56 0.0012 36.3 2.3 34 281-314 220-253 (605)
499 COG2101 SPT15 TATA-box binding 22.5 6E+02 0.013 23.2 9.5 82 421-503 80-183 (185)
500 cd02072 Glm_B12_BD B12 binding 22.3 2.6E+02 0.0056 24.2 5.8 67 239-311 19-89 (128)
No 1
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.3e-79 Score=601.31 Aligned_cols=475 Identities=44% Similarity=0.755 Sum_probs=447.6
Q ss_pred hhcChHHHHHHHHHHHHhcCcchhHHHHHHHhhhhcccCCCcccc--ccCCCCCCCCCCCc-HHHHHHHHHHhCCCCCCC
Q 009181 51 REKGFKQTFVAFFMSSIKLVPGVNKYIEAEKQKVVDKMQSGVKSK--REGWWTELPRAGLG-VGVIEKLKEEKGKDVVWQ 127 (541)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lP~~g~~-~~i~~~l~~~~~~~~~~~ 127 (541)
.++|++.+...++|+.++++|.++.+++++..+..+.++.+..+. ......++|++|.+ +++++.++++..-+.+|.
T Consensus 2 ~~~~l~~r~~~~~f~~l~~~p~v~~~i~~~~~~~k~~~~~~~~~~~~~~~~~~~lP~~gl~~d~v~~~i~~~~~ld~~~~ 81 (491)
T KOG1383|consen 2 HEEGLKKRLSGKVFKLLKKLPFVRVLIEKELNKVKDQLSTFMSRYDRQKMYFFTLPSKGLPKDAVLELINDELMLDGNPR 81 (491)
T ss_pred CchhHHHHhHHHHHHHHhhChHHHHHHHHHHhhhhhhhhhhhhhhhhccceeecCCCCCCCHHHHHHHHHHHhccCCCcc
Confidence 357889999999999999999999999999999999999887754 34456899999999 999999999855444477
Q ss_pred -CCceeeeecCCCCcccHHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHH
Q 009181 128 -GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTES 206 (541)
Q Consensus 128 -~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a 206 (541)
++++|.+|..+.+ +..++.+.+.++ |+++++.+|+.+++|.++++|++.||+.+++. ||..|+|||||
T Consensus 82 ~~~vS~~v~~~~~~---~~~l~~~~~~k~---N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~-----~g~~t~G~Ses 150 (491)
T KOG1383|consen 82 LGLASGVVYWGEPE---LDKLIMEAYNKF---NPLHPDEFPVVRKLEAECVNMIANLFNAPSDS-----CGCGTVGGSES 150 (491)
T ss_pred cCeeeEEEecCCcc---hhhHHHHHHhhc---CccCccccchhHHHHHHHHHHHHHHhcCCccc-----cCccccccchH
Confidence 9999999999888 889999999888 99999999999999999999999999999776 99999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCC-CCccCHHHHHHhhccCceEEEeecCCCC
Q 009181 207 ILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFP 285 (541)
Q Consensus 207 ~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~ 285 (541)
+.++++.++++...++||++|+++++...|.+++|++++++++++.||+++ ++++|+.++.+.+++||++++++.|++|
T Consensus 151 ~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p 230 (491)
T KOG1383|consen 151 GLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFP 230 (491)
T ss_pred HHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccceEEEEEEcCCCC
Confidence 999999999987777899999999999999999999999999999999995 8999999999999999999999999999
Q ss_pred CccccCHHHHHHHHHH-cCCEEEEeCCcccchhhhhhhcCCC-CCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEeccc
Q 009181 286 HGIIDPIQELGELALS-HGTCLHVDLCLGGFVLPFAKKLGYP-IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNRE 363 (541)
Q Consensus 286 ~G~id~i~~I~~la~~-~~i~lhvD~a~gg~~~~f~~~~g~~-~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~ 363 (541)
+|.+||+++|.++..+ +++++|||+|.|||+.| +++. .++|||+.+||.|+++|+||||++|+|+|++++|+++
T Consensus 231 ~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p----~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~ 306 (491)
T KOG1383|consen 231 TGEIEDVEKLADLLLEIWDIPIHVDACLGGFINP----AGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKE 306 (491)
T ss_pred ccchhhHHHHHHHHHHHhCCceeecccCcccccc----ccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccc
Confidence 9999999999999999 99999999999999998 2221 3379999999999999999999999999999999999
Q ss_pred ccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeE
Q 009181 364 IRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTI 443 (541)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~ 443 (541)
++.+++++..+|.||.|.+|++.|||+|++++++|++|..+|.+||.+..+++.+.+++|++.|++++++.++++|..++
T Consensus 307 ~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~ 386 (491)
T KOG1383|consen 307 LLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSF 386 (491)
T ss_pred cccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH--HHHHHHHHHHHHHHHHHHcCCCCCCCCcchhhhhcC
Q 009181 444 VAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV--AVVDVFLRDLRESVETVKQNPGPANGSLAPIYGAAG 521 (541)
Q Consensus 444 v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~--e~id~~i~~L~~~~~~l~~~~~~~~~~~~~~yg~~~ 521 (541)
+.|.....+.+++++.|.++||+++.++.|.++|+|++..+. +-.|+|+.+|++++++++.+|+....+++++||+|+
T Consensus 387 ~~~~s~~~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p~~~~~~~~a~yg~a~ 466 (491)
T KOG1383|consen 387 ILFGSNDVNIFELSDLLRKKGWILNALQFPAAIHICVTRVHAREDVADRFVADIRKVVEELKSLPESKTHGMAAIYGLAQ 466 (491)
T ss_pred EEccCCccchhhhhHHHHhcCcCccccCCCCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCCCcccCcccchhhhhh
Confidence 999998899999999999999999999999999999998877 446999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHhc
Q 009181 522 RMPDRGMVNELLVNYMDST 540 (541)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~ 540 (541)
+.|||++++|++..|+|++
T Consensus 467 ~~~~~~~~~e~~~~~~d~~ 485 (491)
T KOG1383|consen 467 KTPDRSVVDELIVGFLDSV 485 (491)
T ss_pred cCCchhhHHHHHHHHHHhh
Confidence 9999999999999999975
No 2
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=2e-55 Score=466.02 Aligned_cols=408 Identities=17% Similarity=0.204 Sum_probs=329.3
Q ss_pred hhhhcccCCCccccccCCCCCCCCCCCc-HHHHHHHHHH-hCCCCCCC-CCceeeeecCCCCcccHHHHHHHHHHhhccc
Q 009181 82 QKVVDKMQSGVKSKREGWWTELPRAGLG-VGVIEKLKEE-KGKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHT 158 (541)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~lP~~g~~-~~i~~~l~~~-~~~~~~~~-~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~ 158 (541)
.++.+...+..+ +..++.++|++|.+ +++++++.+. .++..+|+ |+++|++ +++.. ++.++.+++...+++
T Consensus 84 ~pv~~~~~p~~l--~~~l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~-~~~~~---~~~~lgd~l~sa~n~ 157 (539)
T PLN02590 84 FPVLSQVQPGYL--RDMLPDSAPERPESLKELLDDVSKKIMPGITHWQSPSYFAYY-ASSTS---VAGFLGEMLNAGLSV 157 (539)
T ss_pred CCCCCCCChHHH--HHhcCCCCCCCCCCHHHHHHHHHHHHhccCCcCCCCCeeEec-cCCCc---HHHHHHHHHHHhccc
Confidence 366666677666 45577889999999 9999999876 78999997 9999886 45555 689999999999999
Q ss_pred CCCCcccchHHHHHHHHHHHHHHHHhCCCCCC-CCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC---CCCeEEecCC
Q 009181 159 NPLHLDIFQSVARFEAEVIAMTAALLGNKEKA-SGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI---TRPEMIIPVS 234 (541)
Q Consensus 159 n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~-~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi---~~~~vi~~~~ 234 (541)
+.+.|..+|+..+||.++.+|+++++|+|+.. ++|+.+|++|+|||+|+++|+.++|++..++.|. .+..|++++.
T Consensus 158 ~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~ 237 (539)
T PLN02590 158 VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQ 237 (539)
T ss_pred ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCC
Confidence 99999999999999999999999999999741 0011278999999999999999999976654332 3446788999
Q ss_pred ccchHHHHHhhcCC---eEEEeeCCC--CCccCHHHHHHhhcc------CceEEEeecCCCCCccccCHHHHHHHHHHcC
Q 009181 235 AHSAYDKAAQYFNI---KLWRVPVDK--EFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDPIQELGELALSHG 303 (541)
Q Consensus 235 ~h~s~~ka~~~~G~---~v~~v~~~~--~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~i~~I~~la~~~~ 303 (541)
+|+|+.|+++++|+ +++.||+++ +++||+++|+++|.+ .|++|+++.+++.+|.+|||++|+++|++||
T Consensus 238 aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g 317 (539)
T PLN02590 238 THSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYG 317 (539)
T ss_pred chHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhC
Confidence 99999999999998 699999984 689999999999975 3799999999999999999999999999999
Q ss_pred CEEEEeCCcccchhhhhhhcCCCCCCCCc---CCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCC---
Q 009181 304 TCLHVDLCLGGFVLPFAKKLGYPIPPFDF---SVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG--- 377 (541)
Q Consensus 304 i~lhvD~a~gg~~~~f~~~~g~~~p~~~~---~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~--- 377 (541)
+|||||+||||++++ +|+++. ....+||+++|+|||++.|++||++++|++..+...+...++|..
T Consensus 318 ~WlHVDaA~GG~al~--------~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~ 389 (539)
T PLN02590 318 IWLHVDAAYAGNACI--------CPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKV 389 (539)
T ss_pred CeEEEecchhhhhhc--------ChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcc
Confidence 999999999999874 233332 345579999999999999999999999997544332222222211
Q ss_pred ------CccCCCcccCCC-CCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC
Q 009181 378 ------GLYVSPTVAGSR-PGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV 450 (541)
Q Consensus 378 ------~~~~~~~~~gsr-~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~ 450 (541)
..+...++..+| +.+ +++|++|+.+|.+|+++++++.+++++++.+.|++.|+|+++.+|..++|||++.+
T Consensus 390 ~~~~~~~d~~d~~i~lsRr~ra--LklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~ 467 (539)
T PLN02590 390 SKKDTVVNYKDWQISLSRRFRS--LKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAP 467 (539)
T ss_pred cccccCCCccccCCCCCCchHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecC
Confidence 123334444444 444 49999999999999999999999999999999999999999999999999999864
Q ss_pred C--C---H----HHHHHHHHhCCcee-cc--CCCCCeEEEEecCCCH--HHHHHHHHHHHHHHHHHHcC
Q 009181 451 V--D---I----FEVNDIMSSKGWHL-NP--LQRPNSIHICVTLQHV--AVVDVFLRDLRESVETVKQN 505 (541)
Q Consensus 451 ~--~---~----~~l~~~l~~~G~~~-~~--~~~~~~iRi~~~~~~~--e~id~~i~~L~~~~~~l~~~ 505 (541)
. + . .++.++|.+.|... .. ++...++|+|+....| +|++++++.|.+...++-.+
T Consensus 468 ~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~~ 536 (539)
T PLN02590 468 VDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTRN 536 (539)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhccc
Confidence 2 1 1 35556777778543 22 2333589999976544 99999999999988777543
No 3
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-53 Score=444.89 Aligned_cols=366 Identities=33% Similarity=0.508 Sum_probs=317.6
Q ss_pred ccCCCCCCCCCCCc-HHHHHHHHHHhCCCCCCC---CCceeeeecCCCCcccHHHHHHHHHHhhcccCCCCcccchHHHH
Q 009181 96 REGWWTELPRAGLG-VGVIEKLKEEKGKDVVWQ---GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVAR 171 (541)
Q Consensus 96 ~~~~~~~lP~~g~~-~~i~~~l~~~~~~~~~~~---~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 171 (541)
.......+|+.|.+ ++++.++......+..+. +++..+. ..... ....+.+++..+++.|..+++.+|++..
T Consensus 26 ~~~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~-~~~~~---~~~~a~~~~~~~~~~nl~d~~~~p~a~~ 101 (460)
T COG0076 26 ALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAG-FCPTR---VPPVAAELLVSALNKNLGDPDESPAAAE 101 (460)
T ss_pred hhhhhccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEc-cCCCC---CHHHHHHHHHHHHhhcCCCcccChhHHH
Confidence 34566779999999 999999998833333332 4444333 33333 5788899999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhc---C---CCCCeEEecCCccchHHHHHhh
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKR---G---ITRPEMIIPVSAHSAYDKAAQY 245 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~---G---i~~~~vi~~~~~h~s~~ka~~~ 245 (541)
+|++++.|+++++|++... +|++|+||||||++|++++|++.++.. + ...|+||+|..+|+|+.|++++
T Consensus 102 ~E~~~v~~l~~l~~~~~~~-----~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~ 176 (460)
T COG0076 102 LEERVVNMLSDLLGAPEEA-----SGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARY 176 (460)
T ss_pred HHHHHHHHHHHHhCCCCCC-----ceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHH
Confidence 9999999999999998665 899999999999999999999775321 1 1257999999999999999999
Q ss_pred cCCeEEEeeCCC-CCccCHHHHHHhhccCceE--EEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 246 FNIKLWRVPVDK-EFRADVKAIKKYINRNTVL--IVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 246 ~G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~--vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
+|++++.+|+++ +++||+++|+++|++++.. |+.+.|++++|.+|||++|+++|++|++|+|||+|+|||++||++.
T Consensus 177 lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~ 256 (460)
T COG0076 177 LGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEP 256 (460)
T ss_pred hCCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCc
Confidence 999999999998 8999999999999999998 9999999999999999999999999999999999999999999887
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEeccc-ccccccccccccCCCccCCCcccCCCCCchHHHHHHHH
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNRE-IRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAAL 401 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al 401 (541)
.+ .+++...+||||++|+||||++|.|||++++|+++ ++.........|.++...+.++.|+|++..++++|+.+
T Consensus 257 ~~----~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l 332 (460)
T COG0076 257 DG----RWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANL 332 (460)
T ss_pred cc----hhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHH
Confidence 66 37899999999999999999999999999999995 55544444444555466777889999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-C-HHHHHHHHHhCCceeccCCCCC
Q 009181 402 MSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV-D-IFEVNDIMSSKGWHLNPLQRPN 474 (541)
Q Consensus 402 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~-~-~~~l~~~l~~~G~~~~~~~~~~ 474 (541)
+.+|.+||++++++++++++++++.|++.+.++++++|..++|+|+.++. + ..+..+.+.+.||.+.....+.
T Consensus 333 ~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~~~~~gw~v~~~~~~~ 407 (460)
T COG0076 333 RRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSERLDRRGWQVPAQLLPK 407 (460)
T ss_pred HHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHHHHhcCceeecccCCc
Confidence 99999999999999999999999999999889999999999999999653 3 6777888889999988766553
No 4
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=3.7e-52 Score=433.81 Aligned_cols=391 Identities=21% Similarity=0.329 Sum_probs=325.7
Q ss_pred CCCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCceeeeecCCCCcccHHHHHHHHHHhhcccCCCCcccchHHHHHHHHH
Q 009181 98 GWWTELPRAGLG-VGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEV 176 (541)
Q Consensus 98 ~~~~~lP~~g~~-~~i~~~l~~~~~~~~~~~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev 176 (541)
....++|++|.+ +++++++.....-+..-++++++++-.+ .. + .+.+++..+++.|..+|..+|...++|+++
T Consensus 12 ~~~~~~p~~~~~~~~~~~~~~~~iyld~~a~~~~~~~~tt~-~~----p-~~~~~~~~~l~~~~~np~s~~~~~~le~~~ 85 (431)
T TIGR01788 12 IPKYRMPEEEMPPDAAYQLIHDELSLDGNPRLNLATFVTTW-ME----P-EARKLMDETINKNMIDKDEYPQTAEIENRC 85 (431)
T ss_pred CCcccCCCCCCCHHHHHHHHHHHhhhcCCcceeeeeeeCCC-CC----H-HHHHHHHHHHhcCCCCcccCccHHHHHHHH
Confidence 345689999999 9999999976432333346666665333 22 2 257777777888888888889888999999
Q ss_pred HHHHHHHhCCC-C-CCCCCccceEEcCcHHHHHHHHHHHHHHHHHh---h--cCCCCCeEEecCCccchHHHHHhhcCCe
Q 009181 177 IAMTAALLGNK-E-KASGGQVCGNMTSGGTESILLAVKSSRDYMRN---K--RGITRPEMIIPVSAHSAYDKAAQYFNIK 249 (541)
Q Consensus 177 ~~~la~l~g~~-~-~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~---~--~Gi~~~~vi~~~~~h~s~~ka~~~~G~~ 249 (541)
++|+++++|++ + .+ ++|++|+||||||++|+.++|+.... . .++.+++|++++.+|+|+.++++++|++
T Consensus 86 ~~~la~llg~~~~~~~----~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~ 161 (431)
T TIGR01788 86 VNMLADLWHAPAKDAE----AVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVE 161 (431)
T ss_pred HHHHHHHhCCCCCCCC----CeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCce
Confidence 99999999998 3 23 57788999999999999998854321 1 2233468999999999999999999999
Q ss_pred EEEeeCCCC-CccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHc------CCEEEEeCCcccchhhhhhh
Q 009181 250 LWRVPVDKE-FRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH------GTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 250 v~~v~~~~~-~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~------~i~lhvD~a~gg~~~~f~~~ 322 (541)
++.||++++ +++|+++|+++|+++|++|+++++||.+|++||+++|+++|+++ |+|+|||+||||+++||...
T Consensus 162 v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~ 241 (431)
T TIGR01788 162 LREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYP 241 (431)
T ss_pred eEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCC
Confidence 999999975 69999999999999999999999999999999999999999999 99999999999999987422
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHH
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALM 402 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~ 402 (541)
-.++++...++||+++|+|||+++|+|+|++++|+++.+...+...++|.++...+.++.++|++..+++.|+.++
T Consensus 242 ----~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~ 317 (431)
T TIGR01788 242 ----DLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFL 317 (431)
T ss_pred ----CchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHH
Confidence 1146777889999999999999999999999999875444444455667766555677889998866678999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC-CCeeEEEEecCC-----CCHHHHHHHHHhCCceeccCCCC---
Q 009181 403 SLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR-PDMTIVAFGSDV-----VDIFEVNDIMSSKGWHLNPLQRP--- 473 (541)
Q Consensus 403 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~f~~~~-----~~~~~l~~~l~~~G~~~~~~~~~--- 473 (541)
.+|.+|+++++++++++++++.+.|++.|+++++++ +..++|+|++.+ .+..++.++|.++||.+..+..|
T Consensus 318 ~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~ 397 (431)
T TIGR01788 318 RLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNA 397 (431)
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCcc
Confidence 999999999999999999999999999999999987 789999999874 46788999999999987655443
Q ss_pred ---CeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 474 ---NSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 474 ---~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
..+|+++....+ +.+++|+++|++++.++
T Consensus 398 ~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 398 EDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 368999865444 99999999999998875
No 5
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=2.4e-52 Score=443.01 Aligned_cols=406 Identities=18% Similarity=0.210 Sum_probs=324.6
Q ss_pred hhhcccCCCccccccCCCCCCCCCCCc-HHHHHHHHHH-hCCCCCCC-CCceeeeecCCCCcccHHHHHHHHHHhhcccC
Q 009181 83 KVVDKMQSGVKSKREGWWTELPRAGLG-VGVIEKLKEE-KGKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTN 159 (541)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~lP~~g~~-~~i~~~l~~~-~~~~~~~~-~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n 159 (541)
++.....+..+ +...+..+|++|.+ +++++++.+. .++..+|+ |+++|++ +++.. ++.++++++...+|++
T Consensus 37 pv~~~~~p~~l--~~~~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~-~~~~~---~~~~lad~l~~~~n~~ 110 (490)
T PLN02880 37 PVLSQVQPGYL--RELLPDSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYFAYY-PSNSS---VAGFLGEMLSAGLNIV 110 (490)
T ss_pred CCCCCCCHHHH--HHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEec-cCCCc---HHHHHHHHHHHhhccC
Confidence 44445555444 34466779999999 9999999875 78899998 8999876 44444 5799999999999999
Q ss_pred CCCcccchHHHHHHHHHHHHHHHHhCCCCCC-CCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC---CCCeEEecCCc
Q 009181 160 PLHLDIFQSVARFEAEVIAMTAALLGNKEKA-SGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI---TRPEMIIPVSA 235 (541)
Q Consensus 160 ~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~-~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi---~~~~vi~~~~~ 235 (541)
...++.+|...++|.++.+|+++++|+|+.. +.+..+|++|+|||+||++|+.++|++..++.|. .+..|++++.+
T Consensus 111 ~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~a 190 (490)
T PLN02880 111 GFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQT 190 (490)
T ss_pred CcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCc
Confidence 9999999999999999999999999999752 0011268999999999999999999976554333 34578899999
Q ss_pred cchHHHHHhhcCC---eEEEeeCCC--CCccCHHHHHHhhcc------CceEEEeecCCCCCccccCHHHHHHHHHHcCC
Q 009181 236 HSAYDKAAQYFNI---KLWRVPVDK--EFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDPIQELGELALSHGT 304 (541)
Q Consensus 236 h~s~~ka~~~~G~---~v~~v~~~~--~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i 304 (541)
|+|+.|+++++|+ +++.||+++ +++||+++|+++|++ .|++|++++|++++|.+||+++|+++|++||+
T Consensus 191 H~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~i 270 (490)
T PLN02880 191 HSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGM 270 (490)
T ss_pred hHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCC
Confidence 9999999999999 489999975 789999999999974 27999999999999999999999999999999
Q ss_pred EEEEeCCcccchhhhhhhcCCCCCCCCcCCC---CceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCC----
Q 009181 305 CLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQ---GVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG---- 377 (541)
Q Consensus 305 ~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~---gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~---- 377 (541)
|+|||+||||++++ .|+++.... ++||+++|+|||+++|++||++++|++......+....+|..
T Consensus 271 wlHVDaA~gg~~~~--------~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~ 342 (490)
T PLN02880 271 WFHVDAAYAGSACI--------CPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKAS 342 (490)
T ss_pred EEEEehhhHHHHHh--------CHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccc
Confidence 99999999999774 334444444 469999999999999999999999976543222222222210
Q ss_pred -----CccCCCcc-cCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC
Q 009181 378 -----GLYVSPTV-AGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV 451 (541)
Q Consensus 378 -----~~~~~~~~-~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~ 451 (541)
..+...++ .|+|+.++ ++|++++.+|.+|+++++++.+++++++.+.|++.|+++++.+|..++|||++.+.
T Consensus 343 ~~~~~~~~~~~~i~~~rr~~al--klw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~ 420 (490)
T PLN02880 343 QANSVVDYKDWQIPLGRRFRSL--KLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPP 420 (490)
T ss_pred cccCCCChhccCcCCCCcccHH--HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCC
Confidence 01122233 57777765 99999999999999999999999999999999999999999999999999998642
Q ss_pred --C---HH----HHHHHHHhCCcee-c--cCCCCCeEEEEecCCCH--HHHHHHHHHHHHHHHHHHc
Q 009181 452 --D---IF----EVNDIMSSKGWHL-N--PLQRPNSIHICVTLQHV--AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 452 --~---~~----~l~~~l~~~G~~~-~--~~~~~~~iRi~~~~~~~--e~id~~i~~L~~~~~~l~~ 504 (541)
+ .. ++.++|.+.|... . ..+...++|+|+...++ +|++++++.|++..+++..
T Consensus 421 ~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 421 KNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred CCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 22 4555666667432 2 23444689999987665 9999999999999887753
No 6
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=9.2e-53 Score=432.28 Aligned_cols=341 Identities=28% Similarity=0.440 Sum_probs=283.5
Q ss_pred cCCCCCCCCCCCc-HHHHHHHHHH-hCCCCCCC-CCceeeeecCCCCcccHHHHHHHHHHhhcccCCCCcccchHHHHHH
Q 009181 97 EGWWTELPRAGLG-VGVIEKLKEE-KGKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFE 173 (541)
Q Consensus 97 ~~~~~~lP~~g~~-~~i~~~l~~~-~~~~~~~~-~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e 173 (541)
...+.++|++|.+ +++++++.+. .++..+|+ |+++|.++.+ .. +..++++++...+|+|..+++.+|..+++|
T Consensus 6 ~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~-~~---~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E 81 (373)
T PF00282_consen 6 ARLDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGG-PS---PASILADLLASALNQNGFTWEASPAATEIE 81 (373)
T ss_dssp GGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT---C---HHHHHHHHHHHHHT-BTTSTTTSHHHHHHH
T ss_pred hcCccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCC-cc---HHHHHHHHHHhhhcccccccccccccccch
Confidence 4567889999999 9999999876 77899998 8888877555 44 689999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCC-CCccceEEcCcHHHHHHHHHHHHHHHHHh---hcC---CCCCeEEecCCccchHHHHHhhc
Q 009181 174 AEVIAMTAALLGNKEKAS-GGQVCGNMTSGGTESILLAVKSSRDYMRN---KRG---ITRPEMIIPVSAHSAYDKAAQYF 246 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~-~~~v~G~~t~Ggt~a~~~al~a~r~~~~~---~~G---i~~~~vi~~~~~h~s~~ka~~~~ 246 (541)
.++.+|+++++|+|.... .++.+|++|+|||+||++|+.++|++..+ ..| +.++.+++++.+|+|+.|++.++
T Consensus 82 ~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~l 161 (373)
T PF00282_consen 82 REVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARIL 161 (373)
T ss_dssp HHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHT
T ss_pred HHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhccee
Confidence 999999999999993320 01137899999999999999999987653 234 34678999999999999999999
Q ss_pred CCeEEEeeCCCCCccCHHHHHHhhcc---C---ceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchh--h
Q 009181 247 NIKLWRVPVDKEFRADVKAIKKYINR---N---TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVL--P 318 (541)
Q Consensus 247 G~~v~~v~~~~~~~~d~~~Le~~i~~---~---t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~--~ 318 (541)
|+.++.||++++++||+++|+++|.+ + +.+|+++.|++.+|.+||+++|+++|++|++|+|||+||||+++ |
T Consensus 162 Glg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~ 241 (373)
T PF00282_consen 162 GLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSP 241 (373)
T ss_dssp TSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHC
T ss_pred eeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccccccc
Confidence 99999999999999999999999864 2 67999999999999999999999999999999999999999554 3
Q ss_pred hhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCC---------CccCCCcccCCC
Q 009181 319 FAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG---------GLYVSPTVAGSR 389 (541)
Q Consensus 319 f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~gsr 389 (541)
+.+ ++.+...++||+++|+||||+.|++||++++|++..+...+....+|.+ ..+...++.+||
T Consensus 242 ~~~-------~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR 314 (373)
T PF00282_consen 242 EYR-------HLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR 314 (373)
T ss_dssp TTG-------GGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG
T ss_pred ccc-------ccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccccccccc
Confidence 222 2445567789999999999999999999999999877665545555544 234556788999
Q ss_pred CCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecC
Q 009181 390 PGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSD 449 (541)
Q Consensus 390 ~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~ 449 (541)
+...+++|++|+.+|.+|+++++++..++++++++.|++.++++++.+|..++|||+++
T Consensus 315 -~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k 373 (373)
T PF00282_consen 315 -RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK 373 (373)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred -cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence 76677999999999999999999999999999999999999999999999999999974
No 7
>PLN02263 serine decarboxylase
Probab=100.00 E-value=7.6e-50 Score=412.93 Aligned_cols=355 Identities=20% Similarity=0.239 Sum_probs=288.6
Q ss_pred HHHHHHHHHH-hCCCCCCCCCceeeeecCCCCcccH-HHHHHHHHHhhcccCCCCcccch---HHHHHHHHHHHHHHHHh
Q 009181 110 VGVIEKLKEE-KGKDVVWQGKCSGTVYIGGSEAEGH-FSLINEACSMFAHTNPLHLDIFQ---SVARFEAEVIAMTAALL 184 (541)
Q Consensus 110 ~~i~~~l~~~-~~~~~~~~~~~~g~~y~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~---~~~~~e~ev~~~la~l~ 184 (541)
+++++.+.+. .++..+ ++| |+.... . ...+.+.+....+.-+..+..++ +++++|.++.+|+++++
T Consensus 76 ~~~l~~~~~~~~~~~~~----~~g--Yp~n~~---~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~ 146 (470)
T PLN02263 76 ASVLARYRKTLVERTKH----HLG--YPYNLD---FDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLW 146 (470)
T ss_pred HHHHHHHHHHHHhcccc----eeC--CCCccc---CChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHh
Confidence 5667777666 333333 344 343333 2 45677766554444433344445 79999999999999999
Q ss_pred CCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHH
Q 009181 185 GNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVK 264 (541)
Q Consensus 185 g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~ 264 (541)
|+++++ .+|++|+||||||++|+.++|++.. +..+++|+.+|+|+.|+++++|++++.||++++|+||++
T Consensus 147 g~p~~~----~~G~vtsGGTEaNL~Al~aARe~~~------~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~ 216 (470)
T PLN02263 147 EIEKNE----YWGYITNCGTEGNLHGILVGREVFP------DGILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCA 216 (470)
T ss_pred CCCCCC----CeEEEeCcHHHHHHHHHHHHHhhcC------CcEEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHH
Confidence 998743 3889999999999999999998532 147899999999999999999999999999999999999
Q ss_pred HHHHhhccC---ceEEEeecCCCCCccccCHHHHHHHHHHcCC-----EEEEeCCcccchhhhhhhcCCCCCCCCcCCCC
Q 009181 265 AIKKYINRN---TVLIVGSAPGFPHGIIDPIQELGELALSHGT-----CLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG 336 (541)
Q Consensus 265 ~Le~~i~~~---t~~vv~~~~~~~~G~id~i~~I~~la~~~~i-----~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g 336 (541)
+|+++|.++ |.+|+++.|++++|++|||++|+++|+++|+ |+|||+||||+++||.+. .|++++...
T Consensus 217 aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~----~~~~df~~~- 291 (470)
T PLN02263 217 DFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKR----APKVTFKKP- 291 (470)
T ss_pred HHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccc----ccccCCCcC-
Confidence 999999765 6899999999999999999999999999997 999999999999998764 356887654
Q ss_pred ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHH
Q 009181 337 VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAI 416 (541)
Q Consensus 337 vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~ 416 (541)
+||+++|+||||++|++||++++|++... .+....+|... ..+++.|||++...+++|++|+.+|.+|+++.++++
T Consensus 292 vDSIsvD~HK~l~~P~~cgvll~R~~~~~--~~~~~~~Yl~~--~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~ 367 (470)
T PLN02263 292 IGSVSVSGHKFVGCPMPCGVQITRMEHIN--VLSSNVEYLAS--RDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKC 367 (470)
T ss_pred ccEEEECCccccCCCcCEEEEEEehhhHh--hhccChHhhCC--CCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 99999999999999999999999975431 11222333322 235788999998778999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHH
Q 009181 417 MEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDL 495 (541)
Q Consensus 417 ~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L 495 (541)
.++++++.+.|++. +++++.+|..++|+|+.+. +.+..+||.+...+ +.+|++++...+ +.+|+|+++|
T Consensus 368 ~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~-------~~~~~~gW~L~~~~--~~~Hivvmphv~~~~id~fi~DL 437 (470)
T PLN02263 368 LRNAHYLKDRLREA-GISAMLNELSSTVVFERPK-------DEEFVRRWQLACQG--NIAHVVVMPSVTIEKLDYFLKEL 437 (470)
T ss_pred HHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCc-------hHHhhcceEEccCC--CcEEEEEcCCCCHHHHHHHHHHH
Confidence 99999999999998 8888888999999998652 22356899999765 469999987544 9999999999
Q ss_pred HHHHHHH
Q 009181 496 RESVETV 502 (541)
Q Consensus 496 ~~~~~~l 502 (541)
++..+..
T Consensus 438 ~~~~~~~ 444 (470)
T PLN02263 438 VEKRSTW 444 (470)
T ss_pred HHHHhhh
Confidence 9987744
No 8
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=4.6e-48 Score=410.82 Aligned_cols=381 Identities=20% Similarity=0.300 Sum_probs=298.1
Q ss_pred CCCCCCCCCc-HHHHHHHHHH-hCCCCCCC-CCceeeeecCCCCcccHHHHHHHHHHhhcccCCCCcccchHHHHHHHHH
Q 009181 100 WTELPRAGLG-VGVIEKLKEE-KGKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEV 176 (541)
Q Consensus 100 ~~~lP~~g~~-~~i~~~l~~~-~~~~~~~~-~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev 176 (541)
...+|++|.+ +++++++.+. .++..+|+ |+++|++..+... ....+.+ +...+|+|...++.+|..+++|.++
T Consensus 59 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~~~~p~---~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v 134 (522)
T TIGR03799 59 SAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMTSALPY---FMLPLSK-LMVALNQNLVKIETSKAFTPLERQV 134 (522)
T ss_pred ccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEeccCCCch---HHHHHHH-HHHHhcCCcceeecCcchHHHHHHH
Confidence 4679999999 9999997654 78899998 9999988664222 2233555 5667899999999999999999999
Q ss_pred HHHHHHHhCCCCCC-------CCCccceEEcCcHHHHHHHHHHHHHHHHHhh---------c---------CCCCCeEEe
Q 009181 177 IAMTAALLGNKEKA-------SGGQVCGNMTSGGTESILLAVKSSRDYMRNK---------R---------GITRPEMII 231 (541)
Q Consensus 177 ~~~la~l~g~~~~~-------~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~---------~---------Gi~~~~vi~ 231 (541)
.+|++++++..++. ..++.+|++|+|||+||++|+.++|++..+. . |..++.|++
T Consensus 135 ~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~ 214 (522)
T TIGR03799 135 LGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILV 214 (522)
T ss_pred HHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEE
Confidence 99999998532100 0011378999999999999999999875321 1 223568999
Q ss_pred cCCccchHHHHHhhcCC---eEEEeeCCCCCccCHHHHHHhhcc------CceEEEeecCCCCCccccCHHHHHHHHHHc
Q 009181 232 PVSAHSAYDKAAQYFNI---KLWRVPVDKEFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDPIQELGELALSH 302 (541)
Q Consensus 232 ~~~~h~s~~ka~~~~G~---~v~~v~~~~~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~i~~I~~la~~~ 302 (541)
++.+|+|+.|+++.+|+ +++.||+|++|+||+++|+++|++ .+++|+.+++++.+|.+||+++|+++|+++
T Consensus 215 S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~ 294 (522)
T TIGR03799 215 SERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQEL 294 (522)
T ss_pred CCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHc
Confidence 99999999999999998 899999999999999999999963 367888889999999999999999999999
Q ss_pred CCEEEEeCCcccchhhhhhhcCCCCCCCCcC---CCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccC---
Q 009181 303 GTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS---VQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWS--- 376 (541)
Q Consensus 303 ~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~---~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~--- 376 (541)
|+|+|||+||||+.++ .++++.. ..++||+++|+|||+++|+|||++++|++...+. +.....|.
T Consensus 295 g~~lHVDaA~gg~~~~--------~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~-~~~~~~Yl~~~ 365 (522)
T TIGR03799 295 GCHFHVDAAWGGATLL--------SNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSA-IEHHAEYILRK 365 (522)
T ss_pred CCeEEEEchhhhHHHh--------CHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHH-hccCcchhcCC
Confidence 9999999999988764 1222222 2467999999999999999999999998765432 22222331
Q ss_pred -CCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCC---
Q 009181 377 -GGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVD--- 452 (541)
Q Consensus 377 -~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~--- 452 (541)
+..+...++.|+|++.. .++|++++.+|.+|+++++++..++++++.+.|++.|+++++.+|..++|||++.+.+
T Consensus 366 ~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~ 444 (522)
T TIGR03799 366 GSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQ 444 (522)
T ss_pred CCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcc
Confidence 12234456778888765 4799999999999999999999999999999999999999999999999999975321
Q ss_pred ----------------HH----HHHHHHHhCCceecc---CC------CC-CeEEEEecCCCH--HHHHHHHHH
Q 009181 453 ----------------IF----EVNDIMSSKGWHLNP---LQ------RP-NSIHICVTLQHV--AVVDVFLRD 494 (541)
Q Consensus 453 ----------------~~----~l~~~l~~~G~~~~~---~~------~~-~~iRi~~~~~~~--e~id~~i~~ 494 (541)
.. .+.+++.+.|..+.+ +. .+ ..+|+|+....| ++++.+++.
T Consensus 445 ~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 445 ALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred cccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 12 444566677844322 11 11 469999965543 888887764
No 9
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=3e-47 Score=389.04 Aligned_cols=319 Identities=20% Similarity=0.268 Sum_probs=267.2
Q ss_pred HHHhhcccCCCCcccch----HHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCC
Q 009181 151 ACSMFAHTNPLHLDIFQ----SVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITR 226 (541)
Q Consensus 151 ~~~~~~~~n~~~~~~~~----~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~ 226 (541)
.+..+...|..+|..+. .++++|+++++|+++++|+++++ ++|+||+||||||++|+.++|+.. ++
T Consensus 42 ~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~----~~G~fTsGGTEaNl~al~~ar~~~---~~--- 111 (374)
T PLN03032 42 QLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDE----YWGYITTCGTEGNLHGILVGREVF---PD--- 111 (374)
T ss_pred HHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCcc----CCEEEeCchHHHHHHHHHHHHHhC---CC---
Confidence 33444444444443333 58999999999999999998765 469999999999999999998642 22
Q ss_pred CeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc---CceEEEeecCCCCCccccCHHHHHHHHHHcC
Q 009181 227 PEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDPIQELGELALSHG 303 (541)
Q Consensus 227 ~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~---~t~~vv~~~~~~~~G~id~i~~I~~la~~~~ 303 (541)
..++++..+|+|+.|+++++|++++.||++++|++|+++|+++|++ +|.+|+++++||++|++||+++|+++|++||
T Consensus 112 ~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g 191 (374)
T PLN03032 112 GILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELG 191 (374)
T ss_pred cEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhC
Confidence 5799999999999999999999999999999999999999999987 5889999999999999999999999999996
Q ss_pred -----CEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCC
Q 009181 304 -----TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGG 378 (541)
Q Consensus 304 -----i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~ 378 (541)
+|+|||+|+|++.+||... .|++++. .++||+++|+||++++|+|+|++++|++.+.. +....+|...
T Consensus 192 ~~~~~~~lHvDaA~gg~~~p~~~~----~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~--~~~~~~Yl~~ 264 (374)
T PLN03032 192 YTEDRFYIHCDGALFGLMMPFVSR----APEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHVKA--LSQNVEYLNS 264 (374)
T ss_pred CCCCCeeEEEEccchhhhhhccCC----CcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhhHh--hccCCcccCC
Confidence 5999999999999988653 3567776 47999999999998889999999999754321 2222333322
Q ss_pred ccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHH
Q 009181 379 LYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVND 458 (541)
Q Consensus 379 ~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~ 458 (541)
..+++.|||+|...+++|++|+++|.+||++++++++++++++.+.|++. +++++..|..++|+|+.+.. +
T Consensus 265 --~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~~------~ 335 (374)
T PLN03032 265 --RDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPMD------E 335 (374)
T ss_pred --CCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCCc------H
Confidence 24678999999888899999999999999999999999999999999996 88988889999999987631 1
Q ss_pred HHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHH
Q 009181 459 IMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRES 498 (541)
Q Consensus 459 ~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~ 498 (541)
. ..+||.++..+ +.+|++++..++ +.+|+|+++|++.
T Consensus 336 ~-~~~~w~l~~~~--~~~hi~vm~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 336 A-FIKKWQLACEG--DIAHVVVMPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred h-HhheeeecccC--CEEEEEECCCCCHHHHHHHHHHHhcc
Confidence 2 33789999765 489999987666 9999999999763
No 10
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=5.7e-46 Score=382.53 Aligned_cols=325 Identities=24% Similarity=0.343 Sum_probs=273.1
Q ss_pred HHHHHHHHhhcccCCCCcccch----HHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhh
Q 009181 146 SLINEACSMFAHTNPLHLDIFQ----SVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNK 221 (541)
Q Consensus 146 ~~~~~~~~~~~~~n~~~~~~~~----~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~ 221 (541)
..+.+.+.. ...|..+|..++ .++++|+++++|+++++|+++.+ ++|++|+||||||++++.++|++.
T Consensus 37 ~~~~~~~~~-~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~----~~G~~TsGgTean~~a~~~ar~~~--- 108 (380)
T PRK02769 37 SALKRFFSF-SINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNE----SWGYITNGGTEGNLYGCYLARELF--- 108 (380)
T ss_pred HHHHHHHHh-hhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCC----CCEEEecChHHHHHHHHHHHHHhC---
Confidence 334444333 333444554444 37899999999999999998654 479999999999999999998742
Q ss_pred cCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccC---ceEEEeecCCCCCccccCHHHHHHH
Q 009181 222 RGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRN---TVLIVGSAPGFPHGIIDPIQELGEL 298 (541)
Q Consensus 222 ~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~---t~~vv~~~~~~~~G~id~i~~I~~l 298 (541)
++ ++|++++.+|+|+.++++++|++.+.||++++|++|+++|+++|+++ |++|++++++|++|++||+++|+++
T Consensus 109 ~~---~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i 185 (380)
T PRK02769 109 PD---GTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEI 185 (380)
T ss_pred CC---cEEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHH
Confidence 33 78999999999999999999999999999999999999999999987 9999999999999999999999999
Q ss_pred HHHcC---CEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEeccccccccccccccc
Q 009181 299 ALSHG---TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEW 375 (541)
Q Consensus 299 a~~~~---i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~ 375 (541)
|++|| +|+|||+|+|++.+||++. .+++++.. ++||+++|+|||+++|+|+|++++|++..... ....+|
T Consensus 186 ~~~~g~~~~~lHVDaA~gg~~~p~~~~----~~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~--~~~~~y 258 (380)
T PRK02769 186 LKKIGIDDYYIHADAALSGMILPFVNN----PPPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERI--SVDVDY 258 (380)
T ss_pred HHHhCCCceEEEEEecccceeecccCc----cccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhc--ccCccc
Confidence 99998 6999999999999998753 34688876 99999999999998999999999997643321 122333
Q ss_pred CCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHH
Q 009181 376 SGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFE 455 (541)
Q Consensus 376 ~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~ 455 (541)
... ..+++.|||++..++++|++|+.+|.+|++++.+++.++++++.+.|++. +++++.+|..++|+|+.++ .+
T Consensus 259 l~~--~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f~~~~---~~ 332 (380)
T PRK02769 259 IGS--RDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVFPCPS---ER 332 (380)
T ss_pred cCC--CCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEEcCCC---HH
Confidence 322 24578999999888999999999999999999999999999999999885 9999999999999998663 12
Q ss_pred HHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 456 VNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 456 l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
+ .+||+++..+ +.+|++++..++ +.+|+|+++|.+....
T Consensus 333 ----~-~~~w~l~~~~--~~~hi~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 333 ----I-WKKWHLATSG--NQAHIITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred ----H-HhCeeEcccC--CEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 2 2789999876 489999988766 8899999999988753
No 11
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-45 Score=365.08 Aligned_cols=420 Identities=19% Similarity=0.241 Sum_probs=352.5
Q ss_pred CcchhHHHHH-HHhhhhcccCCCccccccCCCCCCCCCCCc-HHHHHHHHHH-hCCCCCCCCCceeeeecCCCCcccHHH
Q 009181 70 VPGVNKYIEA-EKQKVVDKMQSGVKSKREGWWTELPRAGLG-VGVIEKLKEE-KGKDVVWQGKCSGTVYIGGSEAEGHFS 146 (541)
Q Consensus 70 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lP~~g~~-~~i~~~l~~~-~~~~~~~~~~~~g~~y~~~~~~~~~~~ 146 (541)
+.|+.+|.+. ...+++++++|+++ +...+.+.|+++.+ ++|++++++. .++.++|++..+.+.|+++++ .++
T Consensus 14 VD~IadY~e~ir~r~v~P~v~PGYl--~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyfpa~~s---~~s 88 (511)
T KOG0628|consen 14 VDYIADYLENIRKRRVLPDVKPGYL--RDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYFPAGNS---YPS 88 (511)
T ss_pred HHHHHHHHHhhhccCCCCCCCcchh--hhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEccCccc---hHH
Confidence 3455566655 35899999999999 78889999999999 9999999998 899999994445578899888 999
Q ss_pred HHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCC---CCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC
Q 009181 147 LINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKA---SGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (541)
Q Consensus 147 ~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~---~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G 223 (541)
++++++...++.-.+.|..+|..+++|..+.+|+++++++|... +.|+.+|++.+.+|++++.++.++|....++-+
T Consensus 89 iladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k 168 (511)
T KOG0628|consen 89 ILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIK 168 (511)
T ss_pred HHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999998533 334568899999999999999999986543211
Q ss_pred -----CC------CCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccC------ceEEEeecCCCCC
Q 009181 224 -----IT------RPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRN------TVLIVGSAPGFPH 286 (541)
Q Consensus 224 -----i~------~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~------t~~vv~~~~~~~~ 286 (541)
.+ +-.+++++.+|.|++|+|...|++++.+++++++.|+.+.|+++|+++ |++++++.+++.+
T Consensus 169 ~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ 248 (511)
T KOG0628|consen 169 SRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSS 248 (511)
T ss_pred cCCCcccchhhhhhheEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccc
Confidence 11 124699999999999999999999999999999999999999999875 8999999999999
Q ss_pred ccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc---eEEEeCCCCCCCCCCCceEEEEeccc
Q 009181 287 GIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV---TSISVDVHKYGLAPKGTSVVLYRNRE 363 (541)
Q Consensus 287 G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv---dsis~~~hK~~~~p~g~g~ll~~~~~ 363 (541)
..+|++++|..+|+++|+|||||+||+|.+.- ||+++....|+ ||+.+++|||+..-..|+.+++++..
T Consensus 249 ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~i--------CpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~ 320 (511)
T KOG0628|consen 249 CAFDELEELGPVCREEGLWLHVDAAYAGSAFI--------CPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGT 320 (511)
T ss_pred cccccHHHhcchhhhcCEEEEeehhhcccccc--------CHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCc
Confidence 99999999999999999999999999887653 77888887775 99999999999999999999999986
Q ss_pred ccccccccccccCCC-------ccCCCcc-cCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEE
Q 009181 364 IRKHQFVAVTEWSGG-------LYVSPTV-AGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFI 435 (541)
Q Consensus 364 ~~~~~~~~~~~~~~~-------~~~~~~~-~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v 435 (541)
.....+...+-|... .|..+.+ .|+|+.++ ++|..++.+|.+++++.+++..++++.+.+.+.+.+.|++
T Consensus 321 ~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSL--KlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~ 398 (511)
T KOG0628|consen 321 KLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSL--KLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEI 398 (511)
T ss_pred eeeeeeecChHhhcchhhccCCCccccccccccchhhH--HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCccee
Confidence 554444333322211 1222333 47888888 9999999999999999999999999999999999999999
Q ss_pred ecCCCeeEEEEecCCCC--HHHHHHHHHhCC-ceec--cCCCCCeEEEEecCCCH--HHHHHHHHHHHHHHHHHHc
Q 009181 436 IGRPDMTIVAFGSDVVD--IFEVNDIMSSKG-WHLN--PLQRPNSIHICVTLQHV--AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 436 ~~~~~~~~v~f~~~~~~--~~~l~~~l~~~G-~~~~--~~~~~~~iRi~~~~~~~--e~id~~i~~L~~~~~~l~~ 504 (541)
..+...++|||+.++.| ...+.+++...| +++. .++..-.+|++++...+ +|+++..+.|.+...++..
T Consensus 399 ~~~~~lgLvcFRlk~~N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~ 474 (511)
T KOG0628|consen 399 VNKRILGLVCFRLKGDNEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFE 474 (511)
T ss_pred ecccccceeEEeecCCcHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999998764 456777777777 3443 34444578999976544 8999999999998877554
No 12
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=6.1e-44 Score=381.68 Aligned_cols=353 Identities=21% Similarity=0.347 Sum_probs=282.6
Q ss_pred CCCCCCCc-HHHHHHHHHH-hCCCCCCC-C-CceeeeecCCCCcccHHHHHHHHHHhhcccCCCCcccchHHHHHHHHHH
Q 009181 102 ELPRAGLG-VGVIEKLKEE-KGKDVVWQ-G-KCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVI 177 (541)
Q Consensus 102 ~lP~~g~~-~~i~~~l~~~-~~~~~~~~-~-~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~ 177 (541)
.+++...+ +++++++.+. .++...|+ + ++.|++..+.. .+.++++++....|+|...++.+|+++++|.++.
T Consensus 54 ~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry~ghm~~~~~----~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi 129 (608)
T TIGR03811 54 SFTKTVNNMKDVLDELSSRLRTESVPWHSAGRYWGHMNSETL----MPAILAYNYAMLWNGNNVAYESSPATSQMEEEVG 129 (608)
T ss_pred ccccCccCHHHHHHHHHHHHhcCCCCCCCccceEEECcCCCC----HHHHHHHHHHHHhCCCCCccccCchHHHHHHHHH
Confidence 45555667 9999999886 56777877 6 99999876655 5899999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHH-----hh-------------------------------
Q 009181 178 AMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMR-----NK------------------------------- 221 (541)
Q Consensus 178 ~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~-----~~------------------------------- 221 (541)
+|+++++|.+.. +|++|+|||+||+.|+.++|+... +.
T Consensus 130 ~~la~l~G~~~~------~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~ 203 (608)
T TIGR03811 130 KEFATLMGYKNG------WGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGD 203 (608)
T ss_pred HHHHHHhCCCCC------CeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccccccccccccc
Confidence 999999999864 789999999999999999998531 00
Q ss_pred -----------cC--CCCC-eEEecCCccchHHHHHhhcCC---eEEEeeCCCCCccCHHHHHHhhccC------ceEEE
Q 009181 222 -----------RG--ITRP-EMIIPVSAHSAYDKAAQYFNI---KLWRVPVDKEFRADVKAIKKYINRN------TVLIV 278 (541)
Q Consensus 222 -----------~G--i~~~-~vi~~~~~h~s~~ka~~~~G~---~v~~v~~~~~~~~d~~~Le~~i~~~------t~~vv 278 (541)
.| ..+. ++++++.+|+|+.|++.++|+ +++.||+|++++||+++|+++|++. +.+||
T Consensus 204 ~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VV 283 (608)
T TIGR03811 204 QIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVV 283 (608)
T ss_pred chhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEE
Confidence 00 1111 689999999999999999999 6999999999999999999999752 67899
Q ss_pred eecCCCCCccccCHHHHHHHH---HHcCC--EEEEeCCcccchhh-hhhhcCCCCCC-----------------------
Q 009181 279 GSAPGFPHGIIDPIQELGELA---LSHGT--CLHVDLCLGGFVLP-FAKKLGYPIPP----------------------- 329 (541)
Q Consensus 279 ~~~~~~~~G~id~i~~I~~la---~~~~i--~lhvD~a~gg~~~~-f~~~~g~~~p~----------------------- 329 (541)
++.|+|.+|.+||+++|+++| +++|+ |+|||+||||++.+ |....+...|.
T Consensus 284 ataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~ 363 (608)
T TIGR03811 284 GVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISRE 363 (608)
T ss_pred EEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHh
Confidence 999999999999999999999 67898 69999999998632 22222111111
Q ss_pred CCc---CCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccC---C----CccCCCcccCCCCCchHHHHHH
Q 009181 330 FDF---SVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWS---G----GLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 330 ~~~---~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
... ...++||+++|+||||+.|++||++++|++.++.. +....+|. + ......++.|||+|+..+++|+
T Consensus 364 ~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~-~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~ 442 (608)
T TIGR03811 364 VYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDV-ISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWA 442 (608)
T ss_pred HHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHHHHHH-HhcCcchhccccccCcccccccceecCCccHHHHHHHH
Confidence 000 24567999999999999999999999999865432 11122221 0 1234567899999987889999
Q ss_pred HHHHH--hHHHHHHHHHHHHHHHHHHHHHhhc------CCCeEE--ecCCCeeEEEEecCCC------CHHHHHHHHHhC
Q 009181 400 ALMSL--GQEGYLENTKAIMEVSESIQKGIKE------IPELFI--IGRPDMTIVAFGSDVV------DIFEVNDIMSSK 463 (541)
Q Consensus 400 al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~------~~~~~v--~~~~~~~~v~f~~~~~------~~~~l~~~l~~~ 463 (541)
+++.+ |.+||.+++++++++++++.+.|++ .+.+++ +.+|+.++|||++... ...++++++.++
T Consensus 443 ~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~~~l~~~n~ln~~i~~~ 522 (608)
T TIGR03811 443 AHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGNDDLVKMNKLNHAFYDY 522 (608)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEEecCCCccHHHHHHHHHHHHHh
Confidence 99998 9999999999999999999999988 456776 7889999999997532 145666777666
Q ss_pred Cc
Q 009181 464 GW 465 (541)
Q Consensus 464 G~ 465 (541)
.-
T Consensus 523 ~~ 524 (608)
T TIGR03811 523 AS 524 (608)
T ss_pred hc
Confidence 54
No 13
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-42 Score=334.44 Aligned_cols=399 Identities=18% Similarity=0.232 Sum_probs=317.5
Q ss_pred hhhhcccCCCccccccCCCCCCCCCCCc-HHHHHHHHHHhCCCCCC-CCCceeeeecCCCCcccHHHHHHHHHHhhcccC
Q 009181 82 QKVVDKMQSGVKSKREGWWTELPRAGLG-VGVIEKLKEEKGKDVVW-QGKCSGTVYIGGSEAEGHFSLINEACSMFAHTN 159 (541)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~lP~~g~~-~~i~~~l~~~~~~~~~~-~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n 159 (541)
+|+.+.+.|..+ .....+++|+++.+ ++++++.++........ ||+++...+.+ .+ +..+..+++++..|+|
T Consensus 56 ~kv~~fhhP~~L--~~l~nlel~~~~esl~qil~~cr~tl~y~vKTgHprffNQl~~g-lD---~~~Lag~wlT~t~Ntn 129 (510)
T KOG0629|consen 56 QKVLDFHHPDEL--KELFNLELRDQPESLAQILEDCRDTLKYSVKTGHPRFFNQLSSG-LD---PIGLAGEWLTSTANTN 129 (510)
T ss_pred ceeecccChHHH--HHHhCcccCCChhhHHHHHHHHHHHHHhhhccCCCcchhhhccC-CC---HHHHHHHHHHhccCCC
Confidence 577888888776 45788999999999 99999999885544444 57777655444 44 5889999999999999
Q ss_pred CCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHh---hcCCC---CCeEEecC
Q 009181 160 PLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRN---KRGIT---RPEMIIPV 233 (541)
Q Consensus 160 ~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~---~~Gi~---~~~vi~~~ 233 (541)
.+.|+..|.+.-||.++...+.++.|++... .|++++||+-|+++++.++|.+..+ ..|.. .-.+++++
T Consensus 130 ~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~-----DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSe 204 (510)
T KOG0629|consen 130 MFTYEIAPVFVLMEEEVLAKMREIVGWEEGG-----DGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSE 204 (510)
T ss_pred CceEEecceEEeehHHHHHHHHHHhCCCCCC-----CceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecc
Confidence 9999999999999999999999999999864 5699999999999999999975432 23322 22457899
Q ss_pred CccchHHHHHhhcCC---eEEEeeCCCCCccCHHHHHHhhcc---C---ceEEEeecCCCCCccccCHHHHHHHHHHcCC
Q 009181 234 SAHSAYDKAAQYFNI---KLWRVPVDKEFRADVKAIKKYINR---N---TVLIVGSAPGFPHGIIDPIQELGELALSHGT 304 (541)
Q Consensus 234 ~~h~s~~ka~~~~G~---~v~~v~~~~~~~~d~~~Le~~i~~---~---t~~vv~~~~~~~~G~id~i~~I~~la~~~~i 304 (541)
.+|+|+.|++..+|+ .++.|++++.|+|++++||+.|-+ + |++|.++++++..|++|||+.|+++|++|++
T Consensus 205 esHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~l 284 (510)
T KOG0629|consen 205 ESHYSIKKAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKL 284 (510)
T ss_pred cchhhHHHHHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCE
Confidence 999999999999995 899999999999999999999953 3 8999999999999999999999999999999
Q ss_pred EEEEeCCcccchhhhhhhcCCCCCCCCcCCCC---ceEEEeCCCCCCCCCCCceEEEEeccccccc------cccccccc
Q 009181 305 CLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG---VTSISVDVHKYGLAPKGTSVVLYRNREIRKH------QFVAVTEW 375 (541)
Q Consensus 305 ~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g---vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~------~~~~~~~~ 375 (541)
|+|||+|+||+++. +. ..+....| ++|+++++||+..+|..||++++|.+.++.. .|.+.++-
T Consensus 285 WmHvDAAwGGglLm-S~-------k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK 356 (510)
T KOG0629|consen 285 WMHVDAAWGGGLLM-SR-------KHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDK 356 (510)
T ss_pred EEEeeccccccccc-Ch-------hhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCc
Confidence 99999999997662 12 23344555 4999999999999999999999988775543 23333321
Q ss_pred CCCc---cC-CCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEEecC
Q 009181 376 SGGL---YV-SPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAFGSD 449 (541)
Q Consensus 376 ~~~~---~~-~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~~~ 449 (541)
.... .+ ....+|++.. +.++|..++.-|.+|+++.++++.++|+||.+.|++.++++.+.. |+...|||.+.
T Consensus 357 ~YdvS~DTgdK~iQCGRh~D--~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~v 434 (510)
T KOG0629|consen 357 FYDVSYDTGDKAIQCGRHVD--VFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYV 434 (510)
T ss_pred eeecccccccchhhcCcccc--HHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccC
Confidence 1111 11 1235676666 559999999999999999999999999999999999888777654 67788888865
Q ss_pred CC-------C----------HHHHHHHHHhCCceeccC----CCCCeEEEEecCC--CHHHHHHHHHHHHHHHHH
Q 009181 450 VV-------D----------IFEVNDIMSSKGWHLNPL----QRPNSIHICVTLQ--HVAVVDVFLRDLRESVET 501 (541)
Q Consensus 450 ~~-------~----------~~~l~~~l~~~G~~~~~~----~~~~~iRi~~~~~--~~e~id~~i~~L~~~~~~ 501 (541)
+. + ...+...|.++|-....+ ..++++|+.++.. +.+|+|.+++.|+++.+.
T Consensus 435 p~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629|consen 435 PPSLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred chHhccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhccC
Confidence 42 1 123456788888554433 3468999988765 348999999999887543
No 14
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=2.2e-38 Score=329.05 Aligned_cols=367 Identities=33% Similarity=0.547 Sum_probs=293.8
Q ss_pred Cc-HHHHHHHHHHhCCCCCCCCCceeeeecCCCCcccHHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCC
Q 009181 108 LG-VGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGN 186 (541)
Q Consensus 108 ~~-~~i~~~l~~~~~~~~~~~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~ 186 (541)
.+ .|+++.++++..++..++ +++|..+....+ .+.+++..++..+...+..+++..+++.++++++++++|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~ 74 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLKYE-RILSSMCTEPHP------IARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHL 74 (371)
T ss_pred CCHHHHHHHHHHHHhcCCCHH-HeeeeeecCchH------HHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCC
Confidence 45 899999999977766665 467766554332 2335555555545444444577888889999999999999
Q ss_pred CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHH
Q 009181 187 KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAI 266 (541)
Q Consensus 187 ~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~L 266 (541)
++.. + ++|+|||+++..+++++++... ++| ++|++++..|+++.++++..|++++.||+++++.+|+++|
T Consensus 75 ~~~~----~--~~~~ggt~a~~~a~~~~~~~~~-~~~---~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l 144 (371)
T PRK13520 75 PDAY----G--YITSGGTEANIQAVRAARNLAK-AEK---PNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAV 144 (371)
T ss_pred CCCC----e--EEecCcHHHHHHHHHHHHhhcc-CCC---ceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHH
Confidence 8653 3 8999999999999999875311 123 7899999999999999999999999999988899999999
Q ss_pred HHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCC
Q 009181 267 KKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHK 346 (541)
Q Consensus 267 e~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK 346 (541)
+++|++++.+|++++++|++|.+.|+++|.++|+++|+++|||++|+++.+|+... .+.+++...++|++++++||
T Consensus 145 ~~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~----~~~~~~~~~~vd~~~~s~~K 220 (371)
T PRK13520 145 EDLIDDNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDD----PPNFDFSLPGVDSITIDPHK 220 (371)
T ss_pred HHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcC----CCCccccCCCCceEEECCcc
Confidence 99999999888899999999999999999999999999999999999988765321 12356667789999999999
Q ss_pred CCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 009181 347 YGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKG 426 (541)
Q Consensus 347 ~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~ 426 (541)
|+.+|.++|++++++++...... ....|..+. ......|+|++..+++++++++.++.+|+++..++..++++++.+.
T Consensus 221 ~~~a~~~~G~~~~~~~~~~~~l~-~~~~~~~~~-~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~ 298 (371)
T PRK13520 221 MGLAPIPAGGILFRDESYLDALA-VDTPYLTSK-KQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEE 298 (371)
T ss_pred ccCccCCceEEEEcCHHHHHhhc-ccCccccCC-CCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHH
Confidence 99889999988888775543321 112222111 1223457788888889999999999999999999999999999999
Q ss_pred hhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHH
Q 009181 427 IKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVE 500 (541)
Q Consensus 427 L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~ 500 (541)
|+++ +++++.++..++++|..+ +..++.+.|.++|+.+.....++.+|+|++..++ +|++++++.|+++++
T Consensus 299 L~~~-g~~~~~~~~~~~v~~~~~--~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 299 LKER-GFEPVIEPVLNIVAFDDP--NPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred HHhC-CCEEecCCCceEEEEecC--CHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 9998 888555667788888875 5778999999999888776666789999987766 999999999998754
No 15
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=1.4e-36 Score=315.68 Aligned_cols=367 Identities=34% Similarity=0.560 Sum_probs=285.7
Q ss_pred HHHHHHHHHHhCCCCCCC-CCceeeeecCCCCcccHHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCC
Q 009181 110 VGVIEKLKEEKGKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKE 188 (541)
Q Consensus 110 ~~i~~~l~~~~~~~~~~~-~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~ 188 (541)
+++++.+.++..+....+ ++....+...+.+ ...+++..+...+...+..+++..++++++++++++++|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~ 76 (373)
T TIGR03812 3 EEVLEELKEYRSEDLKYSDGRILGSMCTNPHP------IAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPD 76 (373)
T ss_pred HHHHHHHHHHHhcCCCCCCCcEEEEEeCCchH------HHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC
Confidence 788999999877777776 6665555443222 223333333333333333456778889999999999999987
Q ss_pred CCCCCccceEEcCcHHHHHHHHHHHHHHHHHh-hcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHH
Q 009181 189 KASGGQVCGNMTSGGTESILLAVKSSRDYMRN-KRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIK 267 (541)
Q Consensus 189 ~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~-~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le 267 (541)
.+ + ++++|+++++..++.+++..... ++| ++|++++++|+++.++++..|++++.+++++++.+|+++++
T Consensus 77 ~~----~--~~~~g~~~~~~~~~~~~~~~~~~~~~g---~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~ 147 (373)
T TIGR03812 77 AY----G--YIVSGGTEANIQAVRAAKNLAREEKRT---PNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVE 147 (373)
T ss_pred CC----e--EEeccHHHHHHHHHHHHHHHHhccCCC---cEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHH
Confidence 64 3 78999999999998887643221 244 78999999999999999999999999999889999999999
Q ss_pred HhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCC
Q 009181 268 KYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKY 347 (541)
Q Consensus 268 ~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~ 347 (541)
+++++++..++...|+|++|.++|+++|.++|+++|+|+|||++|+++..++... |...+.+++...|+|++++++|||
T Consensus 148 ~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~-~~~~~~~d~~~~~~d~~~~s~~K~ 226 (373)
T TIGR03812 148 DLIDDNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKK-GYNPPPFDFSLPGVQSITIDPHKM 226 (373)
T ss_pred HHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhc-CCCCCCccccCCCCCEEEECcccc
Confidence 9999888666666689999999999999999999999999999999888765432 222335677777999999999999
Q ss_pred CCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Q 009181 348 GLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGI 427 (541)
Q Consensus 348 ~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L 427 (541)
+++|.++|++++++++...... ....|..+. ......|+|+...+++++++++.++.+++++..+++.++++++++.|
T Consensus 227 ~~~~~~~G~~~~~~~~~~~~l~-~~~~~~~~~-~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L 304 (373)
T TIGR03812 227 GLSPIPAGGILFRSKSYLKYLS-VDAPYLTVK-KQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEEL 304 (373)
T ss_pred CCCcCCceEEEEeCHHHHhhhc-ccCcccCCC-CCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888887776544321 122232211 12234578888788899999999999999999999999999999999
Q ss_pred hcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHH
Q 009181 428 KEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRE 497 (541)
Q Consensus 428 ~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~ 497 (541)
+++ +++.+.++..+++.|..++ ..++.+.|.++|+.+.....+..+|++++..++ +|+|++++.|++
T Consensus 305 ~~~-g~~~~~~~~~~~v~~~~~~--~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 305 KKI-GFEPVIEPVLNIVAFEVDD--PEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred HhC-CCeEEcCCCceEEEEEeCC--HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 998 5654545677888888653 568999999999888766567899999987766 999999999976
No 16
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=3.9e-38 Score=323.85 Aligned_cols=311 Identities=34% Similarity=0.567 Sum_probs=262.4
Q ss_pred HHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCC-CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhh-
Q 009181 144 HFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNK-EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNK- 221 (541)
Q Consensus 144 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~-~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~- 221 (541)
....+.+.+....+.|...|..+++..++|+++++|+++++|.+ ... .+++|+|||+|+.+++++++.....+
T Consensus 11 ~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~-----~~~~t~ggt~a~~~al~~~~~~~~~~~ 85 (345)
T cd06450 11 PPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDA-----DGVFTSGGSESNLLALLAARDRARKRL 85 (345)
T ss_pred HHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCC-----CEEEeCChhHHHHHHHHHHHHHhhhhh
Confidence 46888899988889888888999999999999999999999997 333 45999999999999999997643220
Q ss_pred -----cCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc------CceEEEeecCCCCCcccc
Q 009181 222 -----RGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR------NTVLIVGSAPGFPHGIID 290 (541)
Q Consensus 222 -----~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id 290 (541)
....+++|+++.++|+++.++++.+|++++.+|+++++.+|+++|++++++ ++.++++++++|++|.++
T Consensus 86 ~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~ 165 (345)
T cd06450 86 KAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAID 165 (345)
T ss_pred hcccccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCC
Confidence 011125889999999999999999999999999988889999999999988 899999999999999999
Q ss_pred CHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccc
Q 009181 291 PIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFV 370 (541)
Q Consensus 291 ~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~ 370 (541)
|+++|+++|+++|+|+|+|++|+.+..++.... .......++|++++++|||+++|.|+|+++++
T Consensus 166 ~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~-----~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~---------- 230 (345)
T cd06450 166 PLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPR-----HLDFGIERVDSISVDPHKYGLVPLGCSAVLVR---------- 230 (345)
T ss_pred CHHHHHHHHHHhCCeEEEechhhHHHhhChhhH-----HHhcCccccCEEEEchhHhhCCCcchHHHHHH----------
Confidence 999999999999999999999998877532111 11223467999999999999999999976543
Q ss_pred cccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC
Q 009181 371 AVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV 450 (541)
Q Consensus 371 ~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~ 450 (541)
++++|++++.++.++++++.++..++++++.+.|++++++++++++..++++|+..+
T Consensus 231 -----------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~ 287 (345)
T cd06450 231 -----------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKP 287 (345)
T ss_pred -----------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECC
Confidence 458999999999999999999999999999999999999999888889999999765
Q ss_pred -----CCHHHHHHHHHhCC-ceeccC--CCCCeEEEEecCCC-H-HHHHHHHHHHHH
Q 009181 451 -----VDIFEVNDIMSSKG-WHLNPL--QRPNSIHICVTLQH-V-AVVDVFLRDLRE 497 (541)
Q Consensus 451 -----~~~~~l~~~l~~~G-~~~~~~--~~~~~iRi~~~~~~-~-e~id~~i~~L~~ 497 (541)
.+..++.++|.++| +.+... ..+.++|++++..+ + +|+|+++++|++
T Consensus 288 ~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 288 SVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred cchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 24568999999995 444432 23568999998763 5 999999999876
No 17
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.7e-36 Score=309.54 Aligned_cols=312 Identities=23% Similarity=0.299 Sum_probs=261.2
Q ss_pred cccchHHHHHHHHHHHHHHHHhCCCC-CCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch---
Q 009181 163 LDIFQSVARFEAEVIAMTAALLGNKE-KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--- 238 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g~~~-~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s--- 238 (541)
+......++..++.++.+++++|+++ ++ | +||+|.|+|+.+...++... .++| |+||++...|+|
T Consensus 58 ~~~~~~~t~~~e~aRe~va~~~~a~~~~e----I--vft~~tT~aln~va~~l~~~--~~~g---deIv~s~~EH~sn~~ 126 (405)
T COG0520 58 HTLAEEATDLYEAAREAVARFLNADSSDE----I--VFTRGTTEALNLVARGLGRS--LKPG---DEIVVSDLEHHSNIV 126 (405)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCCCe----E--EEeCChhHHHHHHHHHhhhh--hcCC---CEEEEccCcchhhHH
Confidence 34455567788889999999999996 54 6 99999999999999988543 2356 999999999998
Q ss_pred -HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchh
Q 009181 239 -YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVL 317 (541)
Q Consensus 239 -~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~ 317 (541)
|...++..|++++.+|+++++.++.+++++.++++|++|.+++.+|.+|++.|+++|+++||++|++++||++++...+
T Consensus 127 pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~ 206 (405)
T COG0520 127 PWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHL 206 (405)
T ss_pred HHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCcc
Confidence 7788888899999999999999999999999999999999999999999999999999999999999999999876655
Q ss_pred hhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCcc---------------CC
Q 009181 318 PFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLY---------------VS 382 (541)
Q Consensus 318 ~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~---------------~~ 382 (541)
++|+...|+|++.+++|||++||.|+|++++|++.+.+ .. +.+.|+.. ..
T Consensus 207 -----------~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~-l~---P~~~gg~~~~~~~~~~~~~~~~~p~ 271 (405)
T COG0520 207 -----------PIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEE-LE---PFLGGGGMIEYVSRDEGVTLAELPL 271 (405)
T ss_pred -----------CCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhh-cC---CcccCCCceeeecccccccccCcch
Confidence 48888999999999999999999999987776654332 21 11111111 11
Q ss_pred CcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC---CeeEEEEecCCCCHHHHHHH
Q 009181 383 PTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP---DMTIVAFGSDVVDIFEVNDI 459 (541)
Q Consensus 383 ~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~---~~~~v~f~~~~~~~~~l~~~ 459 (541)
....|+.....+.++-++++++...|++++.++..++++++.+.|+++|++++++++ ..++++|..++.+..+++..
T Consensus 272 rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~ 351 (405)
T COG0520 272 RFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATL 351 (405)
T ss_pred hhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHH
Confidence 123344444556788899999999999999999999999999999999999999986 48999999999999999999
Q ss_pred HHhCCceeccC-----------CCCCeEEEEecCCCH-HHHHHHHHHHHHHHH
Q 009181 460 MSSKGWHLNPL-----------QRPNSIHICVTLQHV-AVVDVFLRDLRESVE 500 (541)
Q Consensus 460 l~~~G~~~~~~-----------~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~ 500 (541)
|.++|+.+..- +.+..+|+|+..+|+ +|||+|++.|+++.+
T Consensus 352 L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 352 LDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 99999654432 223449999999998 999999999998864
No 18
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-36 Score=298.31 Aligned_cols=305 Identities=24% Similarity=0.365 Sum_probs=250.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHH-hhcCCCCCeEEecCCccchHHHHHhhc
Q 009181 168 SVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMR-NKRGITRPEMIIPVSAHSAYDKAAQYF 246 (541)
Q Consensus 168 ~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~-~~~Gi~~~~vi~~~~~h~s~~ka~~~~ 246 (541)
..+++-++.++.+++++|+++.+ | +|||||||++.+|++.+..... +++| .+||++...|+++...++++
T Consensus 41 ~A~~~ve~AR~~iA~llga~~~e----I--iFTSG~TEsnNlaI~g~~~a~~~~~~~---~HIIts~iEH~aVl~~~~~L 111 (386)
T COG1104 41 EARKAVEEAREQIAKLLGADPEE----I--IFTSGATESNNLAIKGAALAYRNAQKG---KHIITSAIEHPAVLNTCRYL 111 (386)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCe----E--EEecCCcHHHHHHHHhhHHhhhcccCC---CeEEEcccccHHHHHHHHHH
Confidence 45667777999999999999975 7 9999999999999998532222 2234 78999999999999999988
Q ss_pred ---CCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhc
Q 009181 247 ---NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (541)
Q Consensus 247 ---G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~ 323 (541)
|.+|.++|++.+|.+|+++|+++|+++|.+|.+.+.||.+|++.||++|+++|+++++++|+|++++ .
T Consensus 112 e~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa---------~ 182 (386)
T COG1104 112 ERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQA---------V 182 (386)
T ss_pred HhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhh---------c
Confidence 9999999999999999999999999999999999999999999999999999999999999999954 4
Q ss_pred CCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCc----hHHHHHH
Q 009181 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG----LIAGAWA 399 (541)
Q Consensus 324 g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~----~~a~~~~ 399 (541)
|. + +++....++|++++|.||+ +||+|+|++++++. .+-.. -..| .....|.|+|. .+++.-.
T Consensus 183 Gk-i-pi~~~~~~vD~ls~SaHK~-~GpkGiGaLyv~~~-~~~~p-----~i~G----GgQE~g~RsGTenv~~Ivg~~~ 249 (386)
T COG1104 183 GK-I-PIDLEELGVDLLSFSAHKF-GGPKGIGALYVRPG-VRLEP-----LIHG----GGQERGLRSGTENVPGIVGFGK 249 (386)
T ss_pred Cc-e-eccccccCcceEEeehhhc-cCCCceEEEEECCC-CccCc-----eecc----CcCCCCCCCCCccHHHHHHHHH
Confidence 44 3 4778888899999999999 89999998877443 22111 1112 22445667774 3555555
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecCCC---eeEEEEecCCCCHHHHHHHHHhCCceecc------
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGRPD---MTIVAFGSDVVDIFEVNDIMSSKGWHLNP------ 469 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~~---~~~v~f~~~~~~~~~l~~~l~~~G~~~~~------ 469 (541)
|++ +..+.+.....+...++++|.+.|.+. |++.+.+.+. .+++.|.+++...+.+.-.|...|+.+++
T Consensus 250 A~~-~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS 328 (386)
T COG1104 250 AAE-IAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSS 328 (386)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccC
Confidence 554 456778889999999999999999975 9999887752 57888888888888888888888865432
Q ss_pred -----------CCCC-----CeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 470 -----------LQRP-----NSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 470 -----------~~~~-----~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
++.+ +++|||++..|+ +|+|++++.++++++.++.
T Consensus 329 ~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 329 GSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred CCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 2332 689999999988 9999999999999999875
No 19
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=1.2e-33 Score=301.22 Aligned_cols=383 Identities=21% Similarity=0.262 Sum_probs=274.3
Q ss_pred CCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCceeeeecCCCCcccHHHHHHHHHHh--hcccCCCCcc-cchHHHHHHHH
Q 009181 100 WTELPRAGLG-VGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLINEACSM--FAHTNPLHLD-IFQSVARFEAE 175 (541)
Q Consensus 100 ~~~lP~~g~~-~~i~~~l~~~~~~~~~~~~~~~g~~y~~~~~~~~~~~~~~~~~~~--~~~~n~~~~~-~~~~~~~~e~e 175 (541)
.+.||+ .| .++++++.++...+......+.|..++.... .+.+...+... +.+.++++++ .+++..+++.+
T Consensus 43 ~~~~~~--~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~---~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~ 117 (481)
T PRK04366 43 PPELPE--VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKY---NPKINEKVARLPGFAELHPLQPEETVQGALELMYE 117 (481)
T ss_pred CCCCCC--CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCC---CHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHH
Confidence 466887 88 9999999999666554332234433333222 22333333333 3466777776 88999999999
Q ss_pred HHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC-CCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 176 VIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG-ITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 176 v~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G-i~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
+++++++++|++... +..++|+.+...++.+++.... .+| .++++|+++.+.|+++...++..|++++.+|
T Consensus 118 ~~~~la~l~G~~~~~-------l~~~~GA~a~~~~l~~~r~~~~-~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~ 189 (481)
T PRK04366 118 LQEWLKEITGMDAVT-------LQPAAGAHGELTGLLMIRAYHE-ARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIP 189 (481)
T ss_pred HHHHHHHHhCCCceE-------EEeCcHHHHHHHHHHHHHHHhh-ccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEee
Confidence 999999999997432 5556666666665554443222 133 1346999999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhhccCceEEEeecCCCCCccc-cCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcC
Q 009181 255 VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGII-DPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS 333 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~i-d~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~ 333 (541)
++++|.+|+++|+++++++|++|++++|| ++|.+ +|+++|+++|+++|+++|||+|+....+ | ..+..
T Consensus 190 ~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~------g----~~~~~ 258 (481)
T PRK04366 190 SNEDGLVDLEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAIL------G----KARPG 258 (481)
T ss_pred cCCCCCcCHHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhc------c----cCCcc
Confidence 98889999999999999999999999998 89988 5899999999999999999999743322 1 13445
Q ss_pred CCCceEEEeCCCCCCCCCCC-----ceEEEEecccccccccccccccCCCcc-CC--------CcccCCCCCchHHHHHH
Q 009181 334 VQGVTSISVDVHKYGLAPKG-----TSVVLYRNREIRKHQFVAVTEWSGGLY-VS--------PTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 334 ~~gvdsis~~~hK~~~~p~g-----~g~ll~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~gsr~~~~~a~~~~ 399 (541)
..|+|++++++|||+++|.| +|++.++++..+...-... .+.+..+ .. ....++-....+.++|.
T Consensus 259 ~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v-~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~ 337 (481)
T PRK04366 259 DMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVV-EKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYA 337 (481)
T ss_pred ccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCee-eccCCceeecccccccCCCcccccCchHHHHHHHH
Confidence 67999999999999876654 5677777653322110000 0111100 00 00111111234568899
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEec-----CCCCHHHHHHHHHhCCceeccCCC--
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGS-----DVVDIFEVNDIMSSKGWHLNPLQR-- 472 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~-----~~~~~~~l~~~l~~~G~~~~~~~~-- 472 (541)
.+..+|.+|++++.+++..+++|++++|+++.++. ...+....+.|.. .+.+..++.++|.++|+++.....
T Consensus 338 ~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~ 416 (481)
T PRK04366 338 YIRSLGAEGLREVSEDAVLNANYLKARLKDIYDLP-YDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPL 416 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCccc-CCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCcccccc
Confidence 99999999999999999999999999999873332 2223334454543 234788999999999988764332
Q ss_pred --CCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHcCCCC
Q 009181 473 --PNSIHICVTLQHV-AVVDVFLRDLRESVETVKQNPGP 508 (541)
Q Consensus 473 --~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~~~~~ 508 (541)
.+.+|+|++..++ +|+|++++.|+++.+++.++|+.
T Consensus 417 ~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~~~~~ 455 (481)
T PRK04366 417 IVPEALMIEPTETESKETLDAFIAAMKQIAEEAKENPEL 455 (481)
T ss_pred ccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHhCcHh
Confidence 3589999999888 99999999999999999887743
No 20
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=9.9e-33 Score=289.28 Aligned_cols=308 Identities=19% Similarity=0.216 Sum_probs=247.7
Q ss_pred HHHHHHHHHHHHHHHHhCCC-CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HHHH
Q 009181 168 SVARFEAEVIAMTAALLGNK-EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDKA 242 (541)
Q Consensus 168 ~~~~~e~ev~~~la~l~g~~-~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~ka 242 (541)
...+...++++.+++++|.+ +++ + ++|+|+|+++.+++.++... ..++| ++|+++++.|++ +...
T Consensus 57 ~~~~~~~~~r~~la~~~g~~~~~~----i--~~t~g~t~~l~~~~~~~~~~-~~~~g---d~Vl~~~~~~~s~~~~~~~~ 126 (398)
T TIGR03392 57 SLTARYELARQQVARFLNAPDAEN----I--VWTRGTTESINLVAQSYARP-RLQPG---DEIIVSEAEHHANLIPWLMV 126 (398)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCe----E--EEeCChHHHHHHHHHHhhhc-cCCCC---CEEEECCcchhHHHHHHHHH
Confidence 34556677999999999995 444 6 89999999999999887320 01255 899999999987 4566
Q ss_pred HhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 243 AQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 243 ~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
++..|++++.+|+++++.+|+++++++++++|++|++++++||+|.+.|+++|+++|+++|+++++|++|+.+..
T Consensus 127 ~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~----- 201 (398)
T TIGR03392 127 AQQTGAKVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHG----- 201 (398)
T ss_pred HHHcCcEEEEEecCCCCCcCHHHHHHHhccCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCC-----
Confidence 788899999999988888999999999999999999999999999999999999999999999999999864433
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCcc---------------CCCcccC
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLY---------------VSPTVAG 387 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~g 387 (541)
+++....++|++++++||+ ++|.|+|+++.++ +..... ..|.++.. ......|
T Consensus 202 ------~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~G 269 (398)
T TIGR03392 202 ------PPDVQALDIDFYAFSGHKL-YGPTGIGVLYGKT-ELLEAM----PPWQGGGKMLSHVSFDGFIPQAVPHRFEAG 269 (398)
T ss_pred ------CCChhhcCCCEEEEecccc-cCCCceEEEEEcH-HHHhhC----CCeecCCceEeeccccccccCCChhhccCC
Confidence 2444556789999999996 8999999876554 333221 11211110 0112345
Q ss_pred CCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCcee
Q 009181 388 SRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHL 467 (541)
Q Consensus 388 sr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~ 467 (541)
+.+-..++++.++++.+...|++++.+++.++++++.+.|+++|++++..++..++++|..++.+..++.+.|.++|+.+
T Consensus 270 T~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v 349 (398)
T TIGR03392 270 TPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIAL 349 (398)
T ss_pred CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEE
Confidence 66656788999999988888899999999999999999999999999887777789999887667789999999999876
Q ss_pred ccC-----------CCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 468 NPL-----------QRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 468 ~~~-----------~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
... +.++++|+|++.+++ +|++++++.|+++++.+
T Consensus 350 ~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 350 RAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred ecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 532 335789999999888 99999999999988764
No 21
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=1.9e-32 Score=287.52 Aligned_cols=309 Identities=20% Similarity=0.219 Sum_probs=248.2
Q ss_pred hHHHHHHHHHHHHHHHHhCC-CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HHH
Q 009181 167 QSVARFEAEVIAMTAALLGN-KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDK 241 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~-~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~k 241 (541)
....+...++++.+++++|+ ++++ | ++|+|+|+++.+++.++... .-++| ++|+++++.|++ +..
T Consensus 59 ~~~~~~~~~~r~~la~~~g~~~~~~----i--~~~~~~t~~i~~~~~~~~~~-~~~~g---d~vl~~~~~~~s~~~~~~~ 128 (401)
T PRK10874 59 QRLTARYEAAREQVAQLLNAPDAKN----I--VWTRGTTESINLVAQSYARP-RLQPG---DEIIVSEAEHHANLVPWLM 128 (401)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCE----E--EEECCHHHHHHHHHHHhhhc-cCCCc---CEEEECCcchHHHHHHHHH
Confidence 34556667799999999999 4554 6 89999999999999887421 01255 899999999977 566
Q ss_pred HHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 242 a~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
.++..|++++.+|+++++.+|+++++++++++|++|++++++|+||.+.|+++|+++|+++|+++++|++++.+..|
T Consensus 129 ~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~--- 205 (401)
T PRK10874 129 VAQQTGAKVVKLPLGADRLPDVDLLPELITPRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFP--- 205 (401)
T ss_pred HHHHhCCEEEEEecCCCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccccccc---
Confidence 77888999999999888899999999999999999999999999999999999999999999999999998644332
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCc---------------cCCCccc
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGL---------------YVSPTVA 386 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 386 (541)
++....++|++++++||+ ++|.|+|+++.+ ++..... ..|.++. .......
T Consensus 206 --------~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 271 (401)
T PRK10874 206 --------ADVQALDIDFYAFSGHKL-YGPTGIGVLYGK-SELLEAM----SPWQGGGKMLTEVSFDGFTPQSAPWRFEA 271 (401)
T ss_pred --------CCchhcCCCEEEEecccc-cCCCccEEEEEc-hHHHhcC----CCeecCCcceEeeccCccCCCCChhhccC
Confidence 344556799999999995 899999976655 4433321 1111110 0011223
Q ss_pred CCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCce
Q 009181 387 GSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWH 466 (541)
Q Consensus 387 gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~ 466 (541)
|+.+-..++++.++++.+...|+.+..+++.++++++.+.|+++|+++++.++..++++|..++.+..++.+.|.++|+.
T Consensus 272 Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~ 351 (401)
T PRK10874 272 GTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIA 351 (401)
T ss_pred CCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcE
Confidence 55555667899999998888889999999999999999999999999998877788999988776778999999999987
Q ss_pred eccC-----------CCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 467 LNPL-----------QRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 467 ~~~~-----------~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
+... +.++++|+|++.+++ +|+|++++.|+++++.+
T Consensus 352 v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 352 LRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred EeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 6531 335789999999888 99999999999988765
No 22
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=8.9e-32 Score=296.80 Aligned_cols=374 Identities=15% Similarity=0.181 Sum_probs=282.6
Q ss_pred c-HHHHHHHHHHhCCCCCCC-CCceeeeecCCCCcccHHHHHHHHHHhhcccCCCCcc-cchHHHHHHHHHHHHHHHHhC
Q 009181 109 G-VGVIEKLKEEKGKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLD-IFQSVARFEAEVIAMTAALLG 185 (541)
Q Consensus 109 ~-~~i~~~l~~~~~~~~~~~-~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~e~ev~~~la~l~g 185 (541)
| .|+++++.++...+.... +++..+.|....++ ..+.+.-....|....|+.|+ .++|..+++.|+++|+++++|
T Consensus 467 sE~e~~r~~~~L~~kn~~~~~~fi~lGsctmk~na--~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltG 544 (939)
T TIGR00461 467 SETEMLRYLHRLESKDLALNNSMIPLGSCTMKLNA--TAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITG 544 (939)
T ss_pred CHHHHHHHHHHHHhcCCCccccCCCCccCCCccCH--HHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHC
Confidence 7 999999999966655443 55554455443331 334443345666677888888 899999999999999999999
Q ss_pred CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHH
Q 009181 186 NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKA 265 (541)
Q Consensus 186 ~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~ 265 (541)
++. +++..+||+++...+++++|.+...+..-.+.+|++|..+|.+..++++..|++++.||++++|.+|+++
T Consensus 545 md~-------~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~ 617 (939)
T TIGR00461 545 FDA-------ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVD 617 (939)
T ss_pred CCC-------cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHH
Confidence 994 3378888999999999999876543222245789999999999999999999999999999999999999
Q ss_pred HHHhhcc---CceEEEeecCCCCCccccC-HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEE
Q 009181 266 IKKYINR---NTVLIVGSAPGFPHGIIDP-IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSIS 341 (541)
Q Consensus 266 Le~~i~~---~t~~vv~~~~~~~~G~id~-i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis 341 (541)
|++++++ +|++|++++|+| +|.++| +++|+++||++|.+++||+|+...... ..+....|+|++.
T Consensus 618 L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~----------l~~Pg~~GaDi~~ 686 (939)
T TIGR00461 618 LKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVG----------LTSPGDLGADVCH 686 (939)
T ss_pred HHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCC----------CCCccccCCCEEE
Confidence 9999984 899999999999 899987 999999999999999999998432211 1233567899999
Q ss_pred eCCCCCCC-----CCCCceEEEEecccccccccc-ccc--ccCCCcc-CCCcc-cCCCCCchHHHHHHHHHHHhHHHHHH
Q 009181 342 VDVHKYGL-----APKGTSVVLYRNREIRKHQFV-AVT--EWSGGLY-VSPTV-AGSRPGGLIAGAWAALMSLGQEGYLE 411 (541)
Q Consensus 342 ~~~hK~~~-----~p~g~g~ll~~~~~~~~~~~~-~~~--~~~~~~~-~~~~~-~gsr~~~~~a~~~~al~~lg~~g~~~ 411 (541)
++.||+++ ||+|.|++.+++.......-. ... +..+... ..... ..++........|+.++.+|.+|+++
T Consensus 687 ~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~ 766 (939)
T TIGR00461 687 LNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPK 766 (939)
T ss_pred ecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHH
Confidence 99999877 555669999886422111100 000 1111000 00111 12233344568999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEecC----CCeeEEEEecCC------CCHHHHHHHHHhCCceeccCCCC--CeEEEE
Q 009181 412 NTKAIMEVSESIQKGIKEIPELFIIGR----PDMTIVAFGSDV------VDIFEVNDIMSSKGWHLNPLQRP--NSIHIC 479 (541)
Q Consensus 412 ~~~~~~~~a~~l~~~L~~~~~~~v~~~----~~~~~v~f~~~~------~~~~~l~~~l~~~G~~~~~~~~~--~~iRi~ 479 (541)
..+....+++|++++|++ +++++.+ +..+.++|++.+ .+..+++++|.+.|++.....+| +.+-++
T Consensus 767 ~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmie 844 (939)
T TIGR00461 767 ASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVE 844 (939)
T ss_pred HHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEE
Confidence 999999999999999987 4566654 345678887763 46789999999999887654433 678888
Q ss_pred ecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 480 VTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 480 ~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
+|..++ +|+|+|++.+.++.+++.+
T Consensus 845 pTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 845 PTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred eeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 998766 9999999999999988876
No 23
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=3.7e-32 Score=285.57 Aligned_cols=308 Identities=18% Similarity=0.253 Sum_probs=247.2
Q ss_pred chHHHHHHHHHHHHHHHHhCCC-CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HH
Q 009181 166 FQSVARFEAEVIAMTAALLGNK-EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YD 240 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~-~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~ 240 (541)
.+...+...++++.+++++|.+ +++ + ++|+|+|+++..++.++.... -++| ++|++++..|++ +.
T Consensus 62 ~~~~~~~~~~~r~~la~~~~~~~~~~----v--~~t~g~t~~l~~~~~~~~~~~-~~~g---d~vl~~~~~~~s~~~~~~ 131 (406)
T PRK09295 62 SAQATEKMENVRKQAALFINARSAEE----L--VFVRGTTEGINLVANSWGNSN-VRAG---DNIIISEMEHHANIVPWQ 131 (406)
T ss_pred HHHHHHHHHHHHHHHHHHcCcCCCCe----E--EEeCCHHHHHHHHHHHhhhhc-CCCc---CEEEECcchhhHHHHHHH
Confidence 3445566667999999999984 444 6 899999999999888763211 1245 899999999986 45
Q ss_pred HHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
..++..|++++.+|+++++.+|+++|+++++++|++|++++++||+|.+.|+++|+++|+++|+++++|++++.+..
T Consensus 132 ~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~--- 208 (406)
T PRK09295 132 MLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHH--- 208 (406)
T ss_pred HHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCcc---
Confidence 66778899999999988899999999999999999999999999999999999999999999999999999865433
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCc-------------c---CCCc
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGL-------------Y---VSPT 384 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~-------------~---~~~~ 384 (541)
++++...++|++++++||+ ++|.|+|+++++++ .+... +.|.++. + ....
T Consensus 209 --------~~~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~~-~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~r~ 274 (406)
T PRK09295 209 --------PVDVQALDCDFYVFSGHKL-YGPTGIGILYVKEA-LLQEM----PPWEGGGSMIATVSLTEGTTWAKAPWRF 274 (406)
T ss_pred --------ccCchhcCCCEEEeehhhc-cCCCCcEEEEEchH-hHhhC----CCcccCCceeeeeecCCccccCCchhhc
Confidence 3556667899999999995 89999998777654 32221 1111110 0 0112
Q ss_pred ccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-CeeEEEEecCCCCHHHHHHHHHhC
Q 009181 385 VAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-DMTIVAFGSDVVDIFEVNDIMSSK 463 (541)
Q Consensus 385 ~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~~v~f~~~~~~~~~l~~~l~~~ 463 (541)
..|+.....++++.++++.+...|++++.++..++++++.+.|+++++++++++. ..++++|..++.+..++.+.|.++
T Consensus 275 e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~ 354 (406)
T PRK09295 275 EAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNY 354 (406)
T ss_pred CCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcCHHHHHHHHHhC
Confidence 4566766778899999998888899999999999999999999999999998763 367899988777778899999999
Q ss_pred Cceecc-----------CCCCCeEEEEecCCCH-HHHHHHHHHHHHHHH
Q 009181 464 GWHLNP-----------LQRPNSIHICVTLQHV-AVVDVFLRDLRESVE 500 (541)
Q Consensus 464 G~~~~~-----------~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~ 500 (541)
|+.+.. ++.++.+|+|++.+|+ +|+|++++.|+++.+
T Consensus 355 gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 355 GIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 986632 2345689999999998 999999999998754
No 24
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=8.1e-32 Score=282.91 Aligned_cols=312 Identities=21% Similarity=0.239 Sum_probs=245.6
Q ss_pred HHHHHHHHHHHHHHHHhCCC-CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HHHH
Q 009181 168 SVARFEAEVIAMTAALLGNK-EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDKA 242 (541)
Q Consensus 168 ~~~~~e~ev~~~la~l~g~~-~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~ka 242 (541)
...+...++++.+++++|.+ +++ + ++|+|+|+++.+++.++... ...+| ++|+++.+.|++ +.+.
T Consensus 59 ~~~~~~~~~r~~ia~~~~~~~~~~----v--~~~~g~t~~l~~~~~~~~~~-~~~~g---~~vl~~~~~~~s~~~~~~~~ 128 (403)
T TIGR01979 59 RATEAYEAVREKVAKFINAASDEE----I--VFTRGTTESINLVAYSWGDS-NLKAG---DEIVISEMEHHANIVPWQLL 128 (403)
T ss_pred HHHHHHHHHHHHHHHHhCcCCCCe----E--EEeCCHHHHHHHHHHHhhhh-cCCCC---CEEEECcchhhHHHHHHHHH
Confidence 34455667999999999998 344 5 89999999999988876421 11245 899999999988 3467
Q ss_pred HhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 243 AQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 243 ~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
++..|++++.+++++++.+|+++++++++++|++|++++++|++|.+.|+++|+++|++||+++|+|++++.+..
T Consensus 129 ~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~----- 203 (403)
T TIGR01979 129 AERTGATLKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHM----- 203 (403)
T ss_pred HHhcCcEEEEEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCcc-----
Confidence 778899999999998899999999999999999999999999999999999999999999999999999875543
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCC--------Ccc---CCCcccCCCCC
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG--------GLY---VSPTVAGSRPG 391 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~~gsr~~ 391 (541)
++++...++|++++++||+ ++|.|+|+++++++ ...........|.. ..+ ......|+.+.
T Consensus 204 ------~~~~~~~~~d~~~~s~~K~-~gp~G~g~l~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 275 (403)
T TIGR01979 204 ------PVDVQALDCDFYVFSGHKM-YGPTGIGVLYGKEE-LLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNI 275 (403)
T ss_pred ------ccCccccCCCEEEEecccc-cCCCCceEEEEchH-HHhcCCCeecCCCceeecccCccccCCChhhcCCCCccH
Confidence 3555566899999999997 78999998776644 32221111111100 000 01112355555
Q ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC----eeEEEEecCCCCHHHHHHHHHhCCcee
Q 009181 392 GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD----MTIVAFGSDVVDIFEVNDIMSSKGWHL 467 (541)
Q Consensus 392 ~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~----~~~v~f~~~~~~~~~l~~~l~~~G~~~ 467 (541)
..+++++++++.+...|.++..+++.++++++.+.|+++++++++.++. .++++|..++.+..++.+.|.++|+.+
T Consensus 276 ~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v 355 (403)
T TIGR01979 276 AGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAV 355 (403)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEE
Confidence 6678889999888777889999999999999999999999999987642 678889887667788999999999876
Q ss_pred cc-----------CCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 468 NP-----------LQRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 468 ~~-----------~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
.. ++.++++|+|++.+++ +|++++++.|+++++.+
T Consensus 356 ~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 356 RSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred cchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 42 2335789999998877 99999999999988765
No 25
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=9.4e-32 Score=280.10 Aligned_cols=308 Identities=23% Similarity=0.269 Sum_probs=241.8
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHh--
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQ-- 244 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~-- 244 (541)
+...+..+++++++++++|.++++ + ++|+|+|+++.++++++.... .+| ++|+++..+|+++....+
T Consensus 38 ~~~~~~~~~~r~~la~~~g~~~~~----i--~~t~~~t~a~~~al~~~~~~~--~~~---~~vv~~~~~~~s~~~~~~~~ 106 (379)
T TIGR03402 38 GEVGKAVEEAREQVAKLLGAEPDE----I--IFTSGGTESDNTAIKSALAAQ--PEK---RHIITTAVEHPAVLSLCQHL 106 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCe----E--EEeCcHHHHHHHHHHHHHHhc--CCC---CeEEEcccccHHHHHHHHHH
Confidence 445666778999999999998665 5 899999999999998875321 123 789999999999765544
Q ss_pred -hcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhc
Q 009181 245 -YFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (541)
Q Consensus 245 -~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~ 323 (541)
..|++++.+|+++++.+|+++++++++++|.++++++++|++|.+.|+++|+++|+++|+++|+|++++....
T Consensus 107 ~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~------ 180 (379)
T TIGR03402 107 EKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKI------ 180 (379)
T ss_pred HHcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECccccccc------
Confidence 3599999999988899999999999999999999999999999999999999999999999999999864433
Q ss_pred CCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHH
Q 009181 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMS 403 (541)
Q Consensus 324 g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~ 403 (541)
+++....++|++++++||+ ++|.|+|+++++++... .+.+.++........|+..-..++++.++++.
T Consensus 181 -----~~~~~~~~~D~~~~s~~K~-~gp~G~g~l~v~~~~~~------~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~ 248 (379)
T TIGR03402 181 -----PIDLKEMNIDMLSLSGHKL-HGPKGVGALYIRKGTRF------RPLLRGGHQERGRRAGTENVPGIVGLGKAAEL 248 (379)
T ss_pred -----ccCcccCCCCEEEEcHHHc-CCCCceEEEEECCCCCC------CCcccCCccCCCcCCCCccHHHHHHHHHHHHH
Confidence 4666678999999999995 89999999888754311 12222221111112344444456677777765
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEecCCC---eeEEEEecCCCCHHHHHHHHHhCCceecc----------
Q 009181 404 LGQEGYLENTKAIMEVSESIQKGIKE-IPELFIIGRPD---MTIVAFGSDVVDIFEVNDIMSSKGWHLNP---------- 469 (541)
Q Consensus 404 lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~---~~~v~f~~~~~~~~~l~~~l~~~G~~~~~---------- 469 (541)
. .+++++..++..++++++.+.|++ ++++++.+++. .+++.|.+...+..++...|.++|+.+..
T Consensus 249 ~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~ 327 (379)
T TIGR03402 249 A-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSGSLE 327 (379)
T ss_pred H-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCCCCC
Confidence 4 457888889999999999999986 89999987643 34777777667788999999989976542
Q ss_pred -------CC-----CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 470 -------LQ-----RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 470 -------~~-----~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
++ .++.+|+|++.+|+ +|||++++.|+++++.+++
T Consensus 328 ~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 328 PSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred cCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11 13689999999988 9999999999999988764
No 26
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=2.7e-31 Score=298.26 Aligned_cols=370 Identities=16% Similarity=0.198 Sum_probs=272.0
Q ss_pred Cc-HHHHHHHHHHhCCCCCCC-CC-ceeeeecCCCCcccHHHHHHHHHHhhcccCCCCc-ccchHHHHHHHHHHHHHHHH
Q 009181 108 LG-VGVIEKLKEEKGKDVVWQ-GK-CSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHL-DIFQSVARFEAEVIAMTAAL 183 (541)
Q Consensus 108 ~~-~~i~~~l~~~~~~~~~~~-~~-~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~~~~~~~e~ev~~~la~l 183 (541)
.| .|++++++++..++.... +. ..|+.|+..++ ......-....+....|+.+ +.++|..+++.++++|++++
T Consensus 478 ~sE~e~~r~~~~l~~kn~~~~~~~i~lGsct~~~~p---~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~el 554 (954)
T PRK05367 478 HSETEMMRYLRRLEDKDLALDRSMIPLGSCTMKLNA---AAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEI 554 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccceeeCCcCCCcCCH---HHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 47 899999999977665543 33 35666655554 33333333345556678888 89999999999999999999
Q ss_pred hCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccC
Q 009181 184 LGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRAD 262 (541)
Q Consensus 184 ~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d 262 (541)
+|++.. .+..+||++++..+++++|.+..+ +|- .+++|++++.+|.+..+++..+|++++.||++++|.+|
T Consensus 555 tG~d~~-------sl~~~~ga~ge~agL~a~r~~~~~-~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD 626 (954)
T PRK05367 555 TGYDAV-------SLQPNAGAQGEYAGLLAIRAYHES-RGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNID 626 (954)
T ss_pred HCCCCE-------EECccHHHHHHHHHHHHHHHHhhc-cCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcC
Confidence 999843 255667889998888888764332 342 24679999999999999999999999999999899999
Q ss_pred HHHHHHhhcc---CceEEEeecCCCCCccc-cCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCce
Q 009181 263 VKAIKKYINR---NTVLIVGSAPGFPHGII-DPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVT 338 (541)
Q Consensus 263 ~~~Le~~i~~---~t~~vv~~~~~~~~G~i-d~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvd 338 (541)
+++|++++++ ++++|++++|++. |.+ +|+++|+++||++|+|+|||+|+.+..+++ .+....|+|
T Consensus 627 ~~~L~~~i~~~~~~la~V~it~pst~-G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l----------~~pg~~GAD 695 (954)
T PRK05367 627 LDDLRAKAEEHADNLAAIMITYPSTH-GVFEETIREICEIVHEHGGQVYLDGANMNAQVGL----------ARPGDIGAD 695 (954)
T ss_pred HHHHHHHHhccCCCeEEEEEEcCCCC-eeecCCHHHHHHHHHHcCCEEEEECcChhhccCC----------CChhhcCCC
Confidence 9999999976 4789999999985 654 899999999999999999999996554431 122457899
Q ss_pred EEEeCCCCCCCCCCC-----ceEEEEecccccccccccccccCCCccC----CCcccCCCCC--chHHHHHHHHHHHhHH
Q 009181 339 SISVDVHKYGLAPKG-----TSVVLYRNREIRKHQFVAVTEWSGGLYV----SPTVAGSRPG--GLIAGAWAALMSLGQE 407 (541)
Q Consensus 339 sis~~~hK~~~~p~g-----~g~ll~~~~~~~~~~~~~~~~~~~~~~~----~~~~~gsr~~--~~~a~~~~al~~lg~~ 407 (541)
++++++|||++.|.| +|++.++.. +. ...+.+..+... ......+..+ ..+...|+.++.+|.+
T Consensus 696 i~~~s~HK~f~~P~G~GGPg~G~l~vr~~-l~----p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~ 770 (954)
T PRK05367 696 VSHLNLHKTFCIPHGGGGPGVGPIGVKAH-LA----PFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAE 770 (954)
T ss_pred EEEecCcccCCCCcCCCCCceEEEeeccc-cc----ccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHH
Confidence 999999999765554 668888743 11 111222111000 0111111111 2234588889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEEecC------CCCHHHHHHHHHhCCceeccCC--CCCeEE
Q 009181 408 GYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAFGSD------VVDIFEVNDIMSSKGWHLNPLQ--RPNSIH 477 (541)
Q Consensus 408 g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~~~------~~~~~~l~~~l~~~G~~~~~~~--~~~~iR 477 (541)
|+++..+....+++|++++|++..++...++ +..+-+.|++. +.+..++.++|.+.|++..... .++.++
T Consensus 771 Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~ 850 (954)
T PRK05367 771 GLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLM 850 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEE
Confidence 9999999999999999999987533333332 22333444432 2357899999999998876543 357899
Q ss_pred EEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 478 ICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 478 i~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
+++|..++ +|+|+|+++|+++.+++.+
T Consensus 851 i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 851 VEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred EEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999877 9999999999999988876
No 27
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=1.7e-31 Score=282.08 Aligned_cols=313 Identities=19% Similarity=0.224 Sum_probs=246.3
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HHHHH
Q 009181 169 VARFEAEVIAMTAALLGNKE-KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDKAA 243 (541)
Q Consensus 169 ~~~~e~ev~~~la~l~g~~~-~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~ka~ 243 (541)
..+...++++.+++++|.++ ++ + ++|+|+|+++..++.++... .-++| ++|+++.+.|++ +...+
T Consensus 74 ~~~~~~~~r~~la~~~~~~~~~~----v--~~t~g~t~al~~i~~~~~~~-~~~~g---d~vl~~~~~~~s~~~~~~~~a 143 (424)
T PLN02855 74 ATDAYELARKKVAAFINASTSRE----I--VFTRNATEAINLVAYTWGLA-NLKPG---DEVILSVAEHHSNIVPWQLVA 143 (424)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCE----E--EEeCCHHHHHHHHHHHhhhh-cCCCc---CEEEECCCccHHHHHHHHHHH
Confidence 34455678999999999964 44 6 99999999999988764210 11245 899999999987 45566
Q ss_pred hhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhc
Q 009181 244 QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (541)
Q Consensus 244 ~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~ 323 (541)
+..|++++.+++++++.+|+++++++++++|++|++++++|++|.+.|+++|+++|+++|+++++|++++....
T Consensus 144 ~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~------ 217 (424)
T PLN02855 144 QKTGAVLKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHM------ 217 (424)
T ss_pred HHcCCEEEEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCc------
Confidence 78899999999987778999999999999999999999999999999999999999999999999999853322
Q ss_pred CCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCC-------C-cc---CCCcccCCCCCc
Q 009181 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG-------G-LY---VSPTVAGSRPGG 392 (541)
Q Consensus 324 g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~-------~-~~---~~~~~~gsr~~~ 392 (541)
+++....++|++++++||+ ++|.|+|+++++++ .++........|.. . .+ ......|+....
T Consensus 218 -----~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~ 290 (424)
T PLN02855 218 -----PVDVQTLGADFLVASSHKM-CGPTGIGFLWGKSD-LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIG 290 (424)
T ss_pred -----CCCchhcCCCEEEeecccc-cCCCccEEEEEchh-hhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHH
Confidence 3566667899999999996 89999998777654 33221111001100 0 00 011234566666
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC------eeEEEEecCCCCHHHHHHHHHhC-Cc
Q 009181 393 LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD------MTIVAFGSDVVDIFEVNDIMSSK-GW 465 (541)
Q Consensus 393 ~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~------~~~v~f~~~~~~~~~l~~~l~~~-G~ 465 (541)
.++++.++++.+...|++++.+++.++++++++.|+++++++++++.. .++++|..++.+..++.+.|.++ |+
T Consensus 291 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI 370 (424)
T PLN02855 291 EAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGV 370 (424)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCE
Confidence 788999999988888999999999999999999999999999997532 47899998777788999999887 87
Q ss_pred eecc-----------CCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 466 HLNP-----------LQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 466 ~~~~-----------~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
.+.. ++.++++|+|++.+++ +|++++++.|+++++.++.
T Consensus 371 ~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~~ 421 (424)
T PLN02855 371 AIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFSS 421 (424)
T ss_pred EEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 6542 2445789999999988 9999999999999987653
No 28
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=3.6e-31 Score=275.16 Aligned_cols=306 Identities=21% Similarity=0.250 Sum_probs=239.5
Q ss_pred chHHHHHHHHHHHHHHHHhCCC-CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH----H
Q 009181 166 FQSVARFEAEVIAMTAALLGNK-EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY----D 240 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~-~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~----~ 240 (541)
.+...+...++++.+++++|.+ +.+ + ++|+|+|+++.+++.++.... .+| ++|+++.++|++. .
T Consensus 38 ~~~~~~~~~~~~~~la~~~~~~~~~~----v--~~~~g~t~a~~~~~~~l~~~~--~~g---~~vl~~~~~~~~~~~~~~ 106 (373)
T cd06453 38 SARATDAYEAAREKVARFINAPSPDE----I--IFTRNTTEAINLVAYGLGRAN--KPG---DEIVTSVMEHHSNIVPWQ 106 (373)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCe----E--EEeCCHHHHHHHHHHHhhhcC--CCC---CEEEECcchhHHHHHHHH
Confidence 4556777788999999999998 443 5 899999999999998875310 134 8899999999984 4
Q ss_pred HHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
..++..|++++.|++++++.+|++++++++++++.+|++++++||+|.+.|+++|.++|+++|+++|+|++++.+..|
T Consensus 107 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~-- 184 (373)
T cd06453 107 QLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMP-- 184 (373)
T ss_pred HHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCcee--
Confidence 566788999999999988999999999999999999999999999999999999999999999999999998755442
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccC--------CCccC---CCcccCCC
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWS--------GGLYV---SPTVAGSR 389 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~--------~~~~~---~~~~~gsr 389 (541)
+++...|+|++++++||+ +++.|+|+++.+++ ...........|. ...+. .....|+.
T Consensus 185 ---------~~~~~~~~d~~~~s~~K~-~~~~g~g~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~ 253 (373)
T cd06453 185 ---------VDVQDLGCDFLAFSGHKM-LGPTGIGVLYGKEE-LLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTP 253 (373)
T ss_pred ---------eeccccCCCEEEeccccc-cCCCCcEEEEEchH-HhhcCCCeecCCCccccccccccccCCCccccCCCCC
Confidence 344556899999999999 45588998766554 3322111111110 00000 01112445
Q ss_pred CCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC--CeeEEEEecCCCCHHHHHHHHHhCCcee
Q 009181 390 PGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP--DMTIVAFGSDVVDIFEVNDIMSSKGWHL 467 (541)
Q Consensus 390 ~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~f~~~~~~~~~l~~~l~~~G~~~ 467 (541)
+...+++++.+++.+...|++++.++..++++++.+.|+++++++++.++ ..++++|..++.+..++.+.|.++|+.+
T Consensus 254 ~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i 333 (373)
T cd06453 254 NIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAV 333 (373)
T ss_pred CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEe
Confidence 55567799999999988899999999999999999999999999988543 3678888877667889999999999876
Q ss_pred cc-----------CCCCCeEEEEecCCCH-HHHHHHHHHH
Q 009181 468 NP-----------LQRPNSIHICVTLQHV-AVVDVFLRDL 495 (541)
Q Consensus 468 ~~-----------~~~~~~iRi~~~~~~~-e~id~~i~~L 495 (541)
.. .+.++++|+|++..++ +|+|++++.|
T Consensus 334 ~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 334 RAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred ccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 42 2235789999998887 9999998864
No 29
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=2.8e-31 Score=274.91 Aligned_cols=294 Identities=22% Similarity=0.244 Sum_probs=233.4
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHh--
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQ-- 244 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~-- 244 (541)
+...++.+++++.+++++|.++++ + ++|+|+|+++.+++.++..... ++| ++|+++...|+++...+.
T Consensus 39 ~~~~~~~~~~r~~la~~~g~~~~~----v--~~t~~~t~a~~~~l~~~~~~~~-~~g---~~vl~~~~~h~s~~~~~~~~ 108 (364)
T PLN02651 39 WESEDAVEKARAQVAALIGADPKE----I--IFTSGATESNNLAIKGVMHFYK-DKK---KHVITTQTEHKCVLDSCRHL 108 (364)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCe----E--EEeCCHHHHHHHHHHHHHHhcc-CCC---CEEEEcccccHHHHHHHHHH
Confidence 445666777999999999998765 5 8999999999999988754322 245 899999999999766544
Q ss_pred -hcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhc
Q 009181 245 -YFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (541)
Q Consensus 245 -~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~ 323 (541)
..|++++.+|+++++.+|+++++++|+++|.++++++++|++|.+.|+++|+++|+++|+++|||++++.+.+
T Consensus 109 ~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~------ 182 (364)
T PLN02651 109 QQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKI------ 182 (364)
T ss_pred HhcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCc------
Confidence 4589999999988899999999999999999999999999999999999999999999999999999876554
Q ss_pred CCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHH
Q 009181 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMS 403 (541)
Q Consensus 324 g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~ 403 (541)
++++...|+|++++++||| ++|.|+|+++++++..... .+.+.++........|+.+-..++++.++++.
T Consensus 183 -----~~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~l----~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~ 252 (364)
T PLN02651 183 -----PVDVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPRVRL----EPLMSGGGQERGRRSGTENTPLVVGLGAACEL 252 (364)
T ss_pred -----ccCcccCCCCEEEechhhh-CCCCceEEEEEcCCCCCCC----CccccCCCccCCccCCCccHHHHHHHHHHHHH
Confidence 3677788999999999999 7999999988886533221 11222222222233566666778899999988
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEecC--CC---eeEEEEecCCCCHHHHHHHHHhCCcee----------
Q 009181 404 LGQEGYLENTKAIMEVSESIQKGIKE-IPELFIIGR--PD---MTIVAFGSDVVDIFEVNDIMSSKGWHL---------- 467 (541)
Q Consensus 404 lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~--~~---~~~v~f~~~~~~~~~l~~~l~~~G~~~---------- 467 (541)
+.. +.+++.++..++++++.+.|++ +|+++++++ +. .++++|..++.+..++..+|.+ +.+
T Consensus 253 ~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~--i~v~~g~~c~~~~ 329 (364)
T PLN02651 253 AMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGLKE--VAVSSGSACTSAS 329 (364)
T ss_pred HHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCCHHHHHHHhCC--EEEEchhhcCCCC
Confidence 765 4588899999999999999986 789999985 22 4589999887788889988865 222
Q ss_pred -------ccCCC-----CCeEEEEecCCCH-HHHH
Q 009181 468 -------NPLQR-----PNSIHICVTLQHV-AVVD 489 (541)
Q Consensus 468 -------~~~~~-----~~~iRi~~~~~~~-e~id 489 (541)
..++. .+.+|+|++.+|| +|||
T Consensus 330 ~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 330 LEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 11221 3689999999988 7764
No 30
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=8.1e-31 Score=278.81 Aligned_cols=368 Identities=18% Similarity=0.206 Sum_probs=258.4
Q ss_pred ccCCCCCCCCCCCc-HHHHHHHHHHhCCCCCC--CCCceee-eecCCCCcccHHHHHHHHH---HhhcccCCCCcccchH
Q 009181 96 REGWWTELPRAGLG-VGVIEKLKEEKGKDVVW--QGKCSGT-VYIGGSEAEGHFSLINEAC---SMFAHTNPLHLDIFQS 168 (541)
Q Consensus 96 ~~~~~~~lP~~g~~-~~i~~~l~~~~~~~~~~--~~~~~g~-~y~~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~~~~ 168 (541)
+.....+||+.+ + +++++++.++...+..+ +..+.|. .++...+ ..+.+.. ..+...|+++++.+++
T Consensus 36 ~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p-----~~~~~~~~~~~~~~~y~~~~~~~~~g 109 (447)
T PRK00451 36 RLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIP-----AVVDHIISRSEFYTAYTPYQPEISQG 109 (447)
T ss_pred HhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCc-----HHHHHHHhchhHHHhcCCCCCccchH
Confidence 344567899976 8 99999999986544333 3333332 3332222 2222221 2222346777778899
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhh---
Q 009181 169 VARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY--- 245 (541)
Q Consensus 169 ~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~--- 245 (541)
..+...+.++++++++|++..+ + ++|+|||+++..++.+.+. .+| ++|+++++.|+++.++++.
T Consensus 110 ~~~~~~e~~~~la~l~g~~~~~----v--~~~~g~t~~~~~~~~a~~~----~~g---~~Vlv~~~~~~~~~~~~~~~~~ 176 (447)
T PRK00451 110 TLQAIFEYQTMICELTGMDVAN----A--SMYDGATALAEAALMAVRI----TKR---KKVLVSGAVHPEYREVLKTYLK 176 (447)
T ss_pred HHHHHHHHHHHHHHHhCCCcce----E--EecCcHHHHHHHHHHHHHh----cCC---CEEEEeCccCHHHHHHHHHHHH
Confidence 9999999999999999998764 4 8999999988877776542 145 8999999999999888765
Q ss_pred -cCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEE--eCCcccchhhhhhh
Q 009181 246 -FNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHV--DLCLGGFVLPFAKK 322 (541)
Q Consensus 246 -~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhv--D~a~gg~~~~f~~~ 322 (541)
.|++++.+|++++ ++|+++|+++|+++|++|++++| |++|.++|+++|+++|+++|+|+++ |....
T Consensus 177 ~~G~~~~~v~~~~~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~~--------- 245 (447)
T PRK00451 177 GQGIEVVEVPYEDG-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVSL--------- 245 (447)
T ss_pred hCCcEEEEecCCCC-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHHh---------
Confidence 6999999999888 99999999999999999999999 7899999999999999999999998 54421
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCC----CCCCCCceEEEEecccccccccccccccC----C--Ccc---------CCC
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKY----GLAPKGTSVVLYRNREIRKHQFVAVTEWS----G--GLY---------VSP 383 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~----~~~p~g~g~ll~~~~~~~~~~~~~~~~~~----~--~~~---------~~~ 383 (541)
|. ++ .....|+|+++.++||| .+++.|+|+++++++...... .....|. + +.. ...
T Consensus 246 -g~-~~--~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 320 (447)
T PRK00451 246 -GL-LK--PPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMP-GRLVGETVDADGKRGFVLTLQAREQHIRR 320 (447)
T ss_pred -cc-CC--CcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCC-CCEeeeecccCCCeeeEeecccccccccc
Confidence 11 11 12457899999999997 244458998766554322210 0000110 0 000 000
Q ss_pred c----ccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHH
Q 009181 384 T----VAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDI 459 (541)
Q Consensus 384 ~----~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~ 459 (541)
. ..+++.+....+.+++++.++.+|++++.+++.++++++.+.|++++++++...+.+..+++++. .+..++.++
T Consensus 321 ~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~v~~~-~~~~~~~~~ 399 (447)
T PRK00451 321 EKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFNEFVVRLP-KPAEEVNEA 399 (447)
T ss_pred ccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEEEEEEecC-CCHHHHHHH
Confidence 0 00111111113455566778999999999999999999999999998999874443455556543 357899999
Q ss_pred HHhCCceec----cC--CCCCeEEEEecCCCH-HHHHHHHHHHHHHH
Q 009181 460 MSSKGWHLN----PL--QRPNSIHICVTLQHV-AVVDVFLRDLRESV 499 (541)
Q Consensus 460 l~~~G~~~~----~~--~~~~~iRi~~~~~~~-e~id~~i~~L~~~~ 499 (541)
|.++|++.. .. ...+.+|+|++.+++ ++++++++.|++++
T Consensus 400 L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 400 LLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred HHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 999986531 11 123689999998777 99999999998764
No 31
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=8.2e-31 Score=272.69 Aligned_cols=305 Identities=24% Similarity=0.256 Sum_probs=242.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH----HHHh
Q 009181 169 VARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD----KAAQ 244 (541)
Q Consensus 169 ~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~----ka~~ 244 (541)
......++++++++++|.++.+ ++ ++|+|+|+++.+++.+..+ +| ++|+++...|+++. ..++
T Consensus 42 ~~~~~~~~~~~la~~~~~~~~~---~v--~~~~g~t~al~~~~~~~~~-----~g---d~vl~~~~~~~~~~~~~~~~~~ 108 (376)
T TIGR01977 42 ASREVEETRQLLAKLFNAPSSA---HV--VFTNNATTALNIALKGLLK-----EG---DHVITTPMEHNSVARPLECLKE 108 (376)
T ss_pred HHHHHHHHHHHHHHHhCcCCCC---eE--EEeCCHHHHHHHHHHhccC-----CC---CEEEECcchhhHHHHHHHHHHH
Confidence 3466677889999999997553 25 8999999999998877532 55 89999999998864 4556
Q ss_pred hcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcC
Q 009181 245 YFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLG 324 (541)
Q Consensus 245 ~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g 324 (541)
..|++++.++.++++.+|+++++++++++|+++++++++||+|.+.|+++|.++|+++|+++++|++++.+..
T Consensus 109 ~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~------- 181 (376)
T TIGR01977 109 QIGVEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVI------- 181 (376)
T ss_pred HcCcEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCcc-------
Confidence 6799999999988889999999999999999999999999999999999999999999999999999875544
Q ss_pred CCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEeccccccccccccc-----ccCCC-ccCCCcccCCCCCchHHHHH
Q 009181 325 YPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVT-----EWSGG-LYVSPTVAGSRPGGLIAGAW 398 (541)
Q Consensus 325 ~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~gsr~~~~~a~~~ 398 (541)
+++....|+|++++++|||+++|.|+|+++++++........... .|.-. ........|+.+...+++++
T Consensus 182 ----~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~ 257 (376)
T TIGR01977 182 ----PIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLN 257 (376)
T ss_pred ----CCCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHH
Confidence 355667899999999999999999999888887652211110000 00000 00011223555556678999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC----CeeEEEEecCCCCHHHHHHHHHhC-CceeccC---
Q 009181 399 AALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP----DMTIVAFGSDVVDIFEVNDIMSSK-GWHLNPL--- 470 (541)
Q Consensus 399 ~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~----~~~~v~f~~~~~~~~~l~~~l~~~-G~~~~~~--- 470 (541)
++++.+...|.+.+.++..++++++.+.|+++++++++.+. ..++++|..++.+..++.+.|.++ |+.+..-
T Consensus 258 ~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~ 337 (376)
T TIGR01977 258 AGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHC 337 (376)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEccccc
Confidence 99999999999999999999999999999999999998752 257888888777888999999988 7654321
Q ss_pred ----------CCCCeEEEEecCCCH-HHHHHHHHHHHH
Q 009181 471 ----------QRPNSIHICVTLQHV-AVVDVFLRDLRE 497 (541)
Q Consensus 471 ----------~~~~~iRi~~~~~~~-e~id~~i~~L~~ 497 (541)
..++.+|++++.+++ +|+++++++|++
T Consensus 338 ~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 338 APLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred chHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 123689999998888 999999999975
No 32
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=1.7e-30 Score=270.82 Aligned_cols=303 Identities=17% Similarity=0.224 Sum_probs=231.7
Q ss_pred HHHHHHHHHHhCC-CCCCCCCccceEEcCcHHHHHHHHHHHHHH-HHHhhcCCCCCeEEecCCccchHHHHH---hhcCC
Q 009181 174 AEVIAMTAALLGN-KEKASGGQVCGNMTSGGTESILLAVKSSRD-YMRNKRGITRPEMIIPVSAHSAYDKAA---QYFNI 248 (541)
Q Consensus 174 ~ev~~~la~l~g~-~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~-~~~~~~Gi~~~~vi~~~~~h~s~~ka~---~~~G~ 248 (541)
++.++.+.+.+|+ ++++ + ++|+|+|+++.+++.++.. ...+..+ ++|+++...|+++.... +..|+
T Consensus 45 ~~a~~~~~~~~~~~~~~~----i--~~t~g~teal~~~~~~~~~~~~~~~~~---~~vi~~~~e~ps~~~~~~~~~~~G~ 115 (382)
T TIGR03403 45 AEALDKLYKGINARDLDD----I--IITSCATESNNWVLKGVYFDEILKGGK---NHIITTEVEHPAVRATCAFLESLGV 115 (382)
T ss_pred HHHHHHHHHHcCcCCCCe----E--EEeCCHHHHHHHHHHHHHHhhcccCCC---CEEEEcCCccHHHHHHHHHHHHCCC
Confidence 3355556667776 4444 6 8999999999999987631 1111122 68999999999977664 45699
Q ss_pred eEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCC
Q 009181 249 KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIP 328 (541)
Q Consensus 249 ~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p 328 (541)
+++.||+++++.+|+++++++++++|.++++++++||+|.+.|+++|.++|+++|+++|+|++++.+..
T Consensus 116 ~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~----------- 184 (382)
T TIGR03403 116 EVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKI----------- 184 (382)
T ss_pred EEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCC-----------
Confidence 999999998899999999999999999999999999999999999999999999999999999764433
Q ss_pred CCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHH
Q 009181 329 PFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEG 408 (541)
Q Consensus 329 ~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g 408 (541)
+++....++|++++++||| ++|.|+|++++|+.... .+.+.++........|+.....++++..+++.. .+.
T Consensus 185 ~~~~~~~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~~------~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-~~~ 256 (382)
T TIGR03403 185 PVDVQKAGVDFLSFSAHKF-HGPKGVGGLYIRKGVEL------TPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLA-NEY 256 (382)
T ss_pred ccCccccCCCEEEEcchhh-CCCCceEEEEECCCCCC------CCcccCCCCCCCcccCCcChHHHHHHHHHHHHH-HHh
Confidence 3566678899999999998 89999999888765311 122222221111123443334455667777644 345
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC---eeEEEEecCCCCHHHHHHHHHhCCceecc----------------
Q 009181 409 YLENTKAIMEVSESIQKGIKEIPELFIIGRPD---MTIVAFGSDVVDIFEVNDIMSSKGWHLNP---------------- 469 (541)
Q Consensus 409 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~f~~~~~~~~~l~~~l~~~G~~~~~---------------- 469 (541)
++...++...+++++.+.|++++++++++++. .+++.|..++.+..++...|.++|+.+..
T Consensus 257 ~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~ 336 (382)
T TIGR03403 257 LDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMV 336 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHH
Confidence 77888999999999999999999999987642 45777887777788888889999976652
Q ss_pred -CCC-----CCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 470 -LQR-----PNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 470 -~~~-----~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
++. .+.+|+|++.+++ +|+|++++.|++++++++.
T Consensus 337 ~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 337 AIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred HcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 121 2579999999988 9999999999999988764
No 33
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=5.5e-30 Score=268.67 Aligned_cols=306 Identities=20% Similarity=0.279 Sum_probs=232.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHh---hc
Q 009181 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQ---YF 246 (541)
Q Consensus 170 ~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~---~~ 246 (541)
.+..+++++.+++++|.++++ + ++|+|+|+++..++.++.... .++| ++|+++..+|+++..++. ..
T Consensus 46 ~~~~~~~r~~la~~~g~~~~~----v--~~~~g~t~a~~~~l~~l~~~~-~~~g---~~Vi~~~~~h~s~~~~~~~~~~~ 115 (402)
T TIGR02006 46 EEAVENARNQVAELIGADSRE----I--VFTSGATESNNLAIKGIAHFY-KSKG---NHIITSKTEHKAVLDTCRYLERE 115 (402)
T ss_pred HHHHHHHHHHHHHHhCCCCCe----E--EEeCCHHHHHHHHHHHHHHhh-cCCC---CEEEECCCccHHHHHHHHHHHhc
Confidence 355666899999999998765 6 999999999999988775321 1245 899999999999876654 45
Q ss_pred CCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCC
Q 009181 247 NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYP 326 (541)
Q Consensus 247 G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~ 326 (541)
|++++.||+++++.+|++++++++++++.++++++++|++|.+.|+++|.++|+++|+++|||++++.+..
T Consensus 116 g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~--------- 186 (402)
T TIGR02006 116 GFEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKI--------- 186 (402)
T ss_pred CCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCc---------
Confidence 99999999998899999999999999999999999999999999999999999999999999999875544
Q ss_pred CCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhH
Q 009181 327 IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ 406 (541)
Q Consensus 327 ~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~ 406 (541)
+++....++|++++++||+ ++|.|+|+++++++....... .+.++........|+.+...++++..+++.+.
T Consensus 187 --~~~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~~~~~~~~~----~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~- 258 (402)
T TIGR02006 187 --PINVNELKVDLMSISGHKI-YGPKGIGALYVRRKPRVRLEA----LIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK- 258 (402)
T ss_pred --ccCccccCCCEEEEehhhh-cCCCceEEEEEccCCCCCCCc----eecCCCccCCccCCCccHHHHHHHHHHHHHHH-
Confidence 3555667899999999997 789999998888664432111 11222211122335555556677778887654
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC--e-e--EEEEecCCCCHHHHHHHHHh----CCceec---------
Q 009181 407 EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD--M-T--IVAFGSDVVDIFEVNDIMSS----KGWHLN--------- 468 (541)
Q Consensus 407 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~--~-~--~v~f~~~~~~~~~l~~~l~~----~G~~~~--------- 468 (541)
+++++..++...+++++.+.|++++++++.+++. . . .++|. ..+..++...+.+ .|..+.
T Consensus 259 ~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~--~~~~~~~~~~l~~i~v~~G~~c~~~~~~~~~~ 336 (402)
T TIGR02006 259 EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFN--YVEGESLIMALKDLAVSSGSACTSASLEPSYV 336 (402)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEe--CcCHHHHHHhcCCEEEechhhcCCCCCCccHH
Confidence 5788889999999999999999999998886532 1 2 35554 3344555555422 122221
Q ss_pred --cCCC-----CCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 469 --PLQR-----PNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 469 --~~~~-----~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
.++. .+++|+|++.++| +|+|++++.|+++++.++.
T Consensus 337 l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~ 380 (402)
T TIGR02006 337 LRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE 380 (402)
T ss_pred HHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1121 2689999999988 9999999999999988753
No 34
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=2.3e-29 Score=263.76 Aligned_cols=305 Identities=17% Similarity=0.151 Sum_probs=236.6
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH----H
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD----K 241 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~----k 241 (541)
..+..++..++++.+++++|.++.+ + ++++|+|+++..++.++.... ++| ++|+++.+.|++.. .
T Consensus 55 ~~~~~~~~~~l~~~ia~~~~~~~~~----v--~~~~~~t~~l~~~~~~~~~~~--~~g---d~vl~~~~~~~s~~~~~~~ 123 (397)
T TIGR01976 55 SRRADQVVDDAREAVADLLNADPPE----V--VFGANATSLTFLLSRAISRRW--GPG---DEVIVTRLDHEANISPWLQ 123 (397)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCe----E--EEeCCHHHHHHHHHHHHHhcC--CCC---CEEEEcCCchHhHHHHHHH
Confidence 3455667788999999999998665 5 899999999988777763211 255 89999999998753 5
Q ss_pred HHhhcCCeEEEeeCCC-CCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 242 AAQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 242 a~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
.++..|++++.+++++ ++.+|+++++++++++|.+|++++|+||+|.+.|+++|+++|++||+++++|+++.....
T Consensus 124 ~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~--- 200 (397)
T TIGR01976 124 AAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHG--- 200 (397)
T ss_pred HHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhcccc---
Confidence 6677899999999986 789999999999999999999999999999999999999999999999999999743221
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHH
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~a 400 (541)
++++...++|++++++||| ++|. +|+++.+++ ...........|...........|+++...++++.++
T Consensus 201 --------~~~~~~~~~d~~~~s~~K~-~g~~-~G~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~a 269 (397)
T TIGR01976 201 --------LIDVQATGADFLTCSAYKF-FGPH-MGILWGRPE-LLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAA 269 (397)
T ss_pred --------CCCHHHcCCCEEEEechhh-cCCc-eEEEEEcHH-HHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHH
Confidence 3455567899999999999 5664 887666543 3332222223333222222334577777778888899
Q ss_pred HHHHhHHH--------------HHHHHHHHHHHHHHHHHHhhcCCCeEEecC----CCeeEEEEecCCCCHHHHHHHHHh
Q 009181 401 LMSLGQEG--------------YLENTKAIMEVSESIQKGIKEIPELFIIGR----PDMTIVAFGSDVVDIFEVNDIMSS 462 (541)
Q Consensus 401 l~~lg~~g--------------~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~----~~~~~v~f~~~~~~~~~l~~~l~~ 462 (541)
++.+...| ++++.+++.++++++++.|+++++++++.+ ...+++.|...+.+..++.++|.+
T Consensus 270 l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 349 (397)
T TIGR01976 270 VDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLPPQRVVRRLAD 349 (397)
T ss_pred HHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcCHHHHHHHHHH
Confidence 88775443 677888899999999999999888999865 246788888776677899999999
Q ss_pred CCceeccC-----------C---CCCeEEEEecCCCH-HHHHHHHHHH
Q 009181 463 KGWHLNPL-----------Q---RPNSIHICVTLQHV-AVVDVFLRDL 495 (541)
Q Consensus 463 ~G~~~~~~-----------~---~~~~iRi~~~~~~~-e~id~~i~~L 495 (541)
+|+.+... + ..+++|+|++.+++ +|++++++.|
T Consensus 350 ~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 350 QGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 99876532 1 23589999998887 8999998864
No 35
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.97 E-value=2e-29 Score=261.87 Aligned_cols=303 Identities=22% Similarity=0.240 Sum_probs=241.7
Q ss_pred cchHHHHHHHHHHHHHHHHhCCCC-CCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH---
Q 009181 165 IFQSVARFEAEVIAMTAALLGNKE-KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD--- 240 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g~~~-~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~--- 240 (541)
......++.+++++.+++++|+++ .+ + ++++|+|+++..++.++.... ++| ++|+++...|++..
T Consensus 37 ~~~~~~~~~~~~r~~la~~lg~~~~~~----v--~~~~~~t~a~~~~~~~l~~~~--~~g---~~vl~~~~~~~s~~~~~ 105 (371)
T PF00266_consen 37 RSREFAEILEEAREALAKLLGAPPDEE----V--VFTSNGTEALNAVASSLLNPL--KPG---DEVLVTSNEHPSNRYPW 105 (371)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTSSTTEE----E--EEESSHHHHHHHHHHHHHHHG--TTT---CEEEEEESSHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHhcCCccccc----c--ccccccchhhhhhhhcccccc--ccc---ccccccccccccccccc
Confidence 345566777789999999999998 54 6 899999999999999986432 244 89999999999965
Q ss_pred -HHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhh
Q 009181 241 -KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPF 319 (541)
Q Consensus 241 -ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f 319 (541)
..++..|++++.++.+.++.+|+++++++|+++|.+|++++.+|.+|...|+++|+++||++|+++++|++++.+.+
T Consensus 106 ~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~-- 183 (371)
T PF00266_consen 106 EEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCV-- 183 (371)
T ss_dssp HHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTS--
T ss_pred ccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhhccCCceeEechhccccc--
Confidence 45557799999999988899999999999999999999999999999999999999999999999999999865544
Q ss_pred hhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCC-----------ccCCCcccCC
Q 009181 320 AKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGG-----------LYVSPTVAGS 388 (541)
Q Consensus 320 ~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~gs 388 (541)
++|+...|+|++++++|| +++|.|+|+++++++...+ .......|... ........|+
T Consensus 184 ---------~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 252 (371)
T PF00266_consen 184 ---------PIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEAIER-LRPAKPGGGYLDFPSLQEYGLADDARRFEGGT 252 (371)
T ss_dssp ---------S--TTTTTESEEEEESTS-TTSSSTEEEEEEEHHHHHH-HHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS
T ss_pred ---------cccccccccceeeecccc-cCCCCchhhheehhhhhhc-cccccccccccccccchhcccccccccccccc
Confidence 477888899999999999 7999999998888753322 11111112100 0011122455
Q ss_pred CCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC----CCeeEEEEecCCCCHHHHHHHHHhCC
Q 009181 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR----PDMTIVAFGSDVVDIFEVNDIMSSKG 464 (541)
Q Consensus 389 r~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~----~~~~~v~f~~~~~~~~~l~~~l~~~G 464 (541)
.+-..++++..+++.+...|.+++.++..++++++.+.|+++++++++++ ...++++|..++.+..++.+.|.++|
T Consensus 253 ~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~~ 332 (371)
T PF00266_consen 253 PNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGSDADDVVKYLEERG 332 (371)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSSHHHHHHHHHHHT
T ss_pred eeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCCCHHHHHHHHhhcC
Confidence 65566778889999998889999999999999999999999999999773 23689999998889999999999999
Q ss_pred ceecc-CC----------CCCeEEEEecCCCH-HHHHHH
Q 009181 465 WHLNP-LQ----------RPNSIHICVTLQHV-AVVDVF 491 (541)
Q Consensus 465 ~~~~~-~~----------~~~~iRi~~~~~~~-e~id~~ 491 (541)
+.+.. .. ..+++|+|++.+|+ +|||+|
T Consensus 333 I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 333 IAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred EEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 87654 11 23799999999998 999986
No 36
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=8.1e-29 Score=258.22 Aligned_cols=307 Identities=20% Similarity=0.203 Sum_probs=233.1
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH---H
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA---A 243 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka---~ 243 (541)
.....+.+++++.+++++|.++++ + ++|+|+|+++..++.++.... .++| ++|+++...|+++... +
T Consensus 39 ~~~~~~~~~~r~~la~~~g~~~~~----i--~~~~g~t~a~~~~~~~~~~~~-~~~g---~~vv~~~~~h~s~~~~~~~~ 108 (381)
T PRK02948 39 GTASSLLQVCRKTFAEMIGGEEQG----I--YFTSGGTESNYLAIQSLLNAL-PQNK---KHIITTPMEHASIHSYFQSL 108 (381)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCe----E--EEeCcHHHHHHHHHHHHHHhc-cCCC---CEEEECCcccHHHHHHHHHH
Confidence 445566778999999999998765 6 899999999999998875421 1234 7899999999987665 4
Q ss_pred hhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhc
Q 009181 244 QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (541)
Q Consensus 244 ~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~ 323 (541)
+..|++++.+|+++++.+|+++|++++++++.+|++++++||||.+.|+++|.++|+++|+++|||++++....
T Consensus 109 ~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~------ 182 (381)
T PRK02948 109 ESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKL------ 182 (381)
T ss_pred HhCCCEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhcccc------
Confidence 55699999999988899999999999999999999999999999999999999999999999999988643222
Q ss_pred CCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHH
Q 009181 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMS 403 (541)
Q Consensus 324 g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~ 403 (541)
+++....++|+++.++||+ ++|.|+|+++++++...... ..++........|+.....++++.++++.
T Consensus 183 -----~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~~~~~~~------~~~~~~~~~~~~~t~~~~~~~a~~~al~~ 250 (381)
T PRK02948 183 -----PIDVFEMGIDSLSVSAHKI-YGPKGVGAVYINPQVRWKPV------FPGTTHEKGFRPGTVNVPGIAAFLTAAEN 250 (381)
T ss_pred -----ccCcccCCCCEEEecHHhc-CCCCcEEEEEEcCCCCCCCc------ccCCCCCCCcCCCCccHHHHHHHHHHHHH
Confidence 3556667899999999997 78999998777654211100 11111111122344444456677777765
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEe--cCCC---eeEEEEecCCCCHHHHHHHHHhCCceeccC--------
Q 009181 404 LGQEGYLENTKAIMEVSESIQKGIKEIPELFII--GRPD---MTIVAFGSDVVDIFEVNDIMSSKGWHLNPL-------- 470 (541)
Q Consensus 404 lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~--~~~~---~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~-------- 470 (541)
+. ++.++..+++.++++++.+.|+++ ++++. +++. ..++.|...+.+..++...|.++|+.+...
T Consensus 251 ~~-~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~ 328 (381)
T PRK02948 251 IL-KNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQVGKQ 328 (381)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcCCCCC
Confidence 43 467888999999999999999987 54443 2222 346777776667778888888899776521
Q ss_pred ---------CC-----CCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 471 ---------QR-----PNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 471 ---------~~-----~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
+. .+.+|+|++.+++ +|+|++++.|+++++.+-
T Consensus 329 ~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 376 (381)
T PRK02948 329 EPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred CCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 11 3689999998887 999999999999887654
No 37
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.97 E-value=9.7e-29 Score=276.29 Aligned_cols=376 Identities=15% Similarity=0.164 Sum_probs=273.4
Q ss_pred CCCCCCC--CCCc-HHHHHHHHHHhCCCCCCC-C-CceeeeecCCCCcccHHHHHHHHHHhhcccCCCCc-ccchHHHHH
Q 009181 99 WWTELPR--AGLG-VGVIEKLKEEKGKDVVWQ-G-KCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHL-DIFQSVARF 172 (541)
Q Consensus 99 ~~~~lP~--~g~~-~~i~~~l~~~~~~~~~~~-~-~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~~~~~~~ 172 (541)
..+..|+ +-.| .++++++.++...+.... + --.|..-+--++ ..+...-.+-.|.+-.|+.+ +..+|..++
T Consensus 493 ~~l~~p~f~~~~se~~~~r~~~~l~~~~~~~~~~~~plgsctmk~n~---~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~ 569 (993)
T PLN02414 493 PYLTHPIFNQYHSEHELLRYLHRLQNKDLSLVHSMIPLGSCTMKLNA---TTEMMPVTWPEFANIHPFAPVDQAQGYQEM 569 (993)
T ss_pred ccccCcccccccCHHHHHHHHHHHhhcccccccCCccCcccccccCc---hhhhhhhcCcchhhcCCCCCHHHHHHHHHH
Confidence 3445565 3357 999999999966554433 2 123333333333 22222222333444455554 456888999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHH----HHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccchHHHHHhhcC
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGT----ESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYDKAAQYFN 247 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt----~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s~~ka~~~~G 247 (541)
..++++++++++|++. + ++++++| +|++++++++.+ .+|- .+++|++|..+|.+....+...|
T Consensus 570 ~~~~r~~la~i~g~~~------v--~f~pnaga~ge~a~~~vi~~~~~----~~Gd~~r~~vli~~~aH~sn~a~a~~~G 637 (993)
T PLN02414 570 FEDLGDLLCEITGFDS------F--SLQPNAGAAGEYAGLMVIRAYHL----SRGDHHRNVCIIPVSAHGTNPASAAMCG 637 (993)
T ss_pred HHHHHHHHHHHhCCCe------E--EEcCCCcHHHHHHHHHHHHHHHh----ccCCCCCCEEEeCCCcCccCHHHHHHCC
Confidence 9999999999999932 5 8999988 899999988853 1241 34589999999999999999999
Q ss_pred CeEEEeeCCCCCccCHHHHHHhhcc---CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcC
Q 009181 248 IKLWRVPVDKEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLG 324 (541)
Q Consensus 248 ~~v~~v~~~~~~~~d~~~Le~~i~~---~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g 324 (541)
++++.||++++|.+|+++|++++++ +|++|++++|+|..|..+|+++|+++||++|+.++||+++..... +
T Consensus 638 ~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~------~ 711 (993)
T PLN02414 638 MKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQV------G 711 (993)
T ss_pred CEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhcc------C
Confidence 9999999999999999999999994 789999999999999999999999999999999999999743221 1
Q ss_pred CCCCCCCcCCCCceEEEeCCCCCCCCCC-----CceEEEEecccccccccccccccCCCc---cC---CCcccCCCCC--
Q 009181 325 YPIPPFDFSVQGVTSISVDVHKYGLAPK-----GTSVVLYRNREIRKHQFVAVTEWSGGL---YV---SPTVAGSRPG-- 391 (541)
Q Consensus 325 ~~~p~~~~~~~gvdsis~~~hK~~~~p~-----g~g~ll~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~gsr~~-- 391 (541)
..+....|+|++.++.||++++|. |+|++.++.+ +.. ..+.|..+. +. ....-|++..
T Consensus 712 ----l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~-L~p----~lPg~~v~~~~~~~~r~~~s~iGt~~~a~ 782 (993)
T PLN02414 712 ----LTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAP----FLPSHPVVPTGGIPRPEKTQPLGTISAAP 782 (993)
T ss_pred ----cCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh-hcc----cCCCCccccCCCcccccCCCCcCCccchh
Confidence 234467889999999999876555 4898776653 221 222222110 01 1112244332
Q ss_pred ----chHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEEecC------CCCHHHHHHH
Q 009181 392 ----GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAFGSD------VVDIFEVNDI 459 (541)
Q Consensus 392 ----~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~~~------~~~~~~l~~~ 459 (541)
..+...|+-+..+|.+|+++..++...+++|++++|++..++...++ +.++-+.+... +.+..+++++
T Consensus 783 ~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~kr 862 (993)
T PLN02414 783 WGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKR 862 (993)
T ss_pred hhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHH
Confidence 23446677778899999999999999999999999987555554443 32334444433 2466899999
Q ss_pred HHhCCceeccCC--CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 460 MSSKGWHLNPLQ--RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 460 l~~~G~~~~~~~--~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
|.+.|++..... .++.+|+++|.+++ +|+|+|+++|+++.+++.+
T Consensus 863 L~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 863 LMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred HHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 999998765443 35789999999887 9999999999999998875
No 38
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.97 E-value=2.1e-29 Score=260.19 Aligned_cols=332 Identities=15% Similarity=0.124 Sum_probs=246.5
Q ss_pred ecCCCCcccHHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHH
Q 009181 135 YIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSS 214 (541)
Q Consensus 135 y~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~ 214 (541)
+.++.. +++.+.+++..... . ..++...++..++++.+++++|.++.. ..++|+|||+++..++.++
T Consensus 4 ~~~~~~---~~~~v~~a~~~~~~----~-~~~~~~~~~~~~~~~~la~~~g~~~~~-----~~~~~~~~t~al~~~~~~~ 70 (356)
T cd06451 4 IPGPSN---VPPRVLKAMNRPML----G-HRSPEFLALMDEILEGLRYVFQTENGL-----TFLLSGSGTGAMEAALSNL 70 (356)
T ss_pred cCCCcC---CCHHHHHHhCCCcc----C-CCCHHHHHHHHHHHHHHHHHhcCCCCC-----EEEEecCcHHHHHHHHHHh
Confidence 344444 45666666643221 1 135666777888999999999996544 2378999999999999887
Q ss_pred HHHHHhhcCCCCCeEEecCCccch--HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc-CceEEEeecCCCCCccccC
Q 009181 215 RDYMRNKRGITRPEMIIPVSAHSA--YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDP 291 (541)
Q Consensus 215 r~~~~~~~Gi~~~~vi~~~~~h~s--~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~ 291 (541)
.. +| ++|+++...|++ +...++..|++++.+|+++++.+|++++++++++ +|.+|++++++|++|.+.|
T Consensus 71 ~~-----~g---~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~ 142 (356)
T cd06451 71 LE-----PG---DKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP 142 (356)
T ss_pred CC-----CC---CEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC
Confidence 42 56 899999888887 5677888999999999988889999999999987 8999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccc-
Q 009181 292 IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFV- 370 (541)
Q Consensus 292 i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~- 370 (541)
+++|+++|+++|+++++|++++.+.. +++....++|++.+++|||+++|.|+|+++.+++ +......
T Consensus 143 ~~~i~~~a~~~~~~li~D~~~~~g~~-----------~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~-~~~~~~~~ 210 (356)
T cd06451 143 LEGIGALAKKHDALLIVDAVSSLGGE-----------PFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSER-ALERIKKK 210 (356)
T ss_pred HHHHHHHHHhcCCEEEEeeehhccCc-----------cccccccCccEEEecCchhccCCCCcceeEECHH-HHHHHHhc
Confidence 99999999999999999999753322 2334445789999999999999999998877654 3322111
Q ss_pred -cccccCCC-----ccC--CCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC--
Q 009181 371 -AVTEWSGG-----LYV--SPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD-- 440 (541)
Q Consensus 371 -~~~~~~~~-----~~~--~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-- 440 (541)
....|... .+. .....++.+-..++++.++++.+...++++..++..++++++.+.|++. ++++..++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 289 (356)
T cd06451 211 TKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELR 289 (356)
T ss_pred CCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccC
Confidence 11111100 000 0011122222335677888888888899999999999999999999987 888876432
Q ss_pred ee-EEEEecCC-CCHHHHHHHHHhC-CceeccC---CCCCeEEEEecCCCH-HHHHHHHHHHHHHHH
Q 009181 441 MT-IVAFGSDV-VDIFEVNDIMSSK-GWHLNPL---QRPNSIHICVTLQHV-AVVDVFLRDLRESVE 500 (541)
Q Consensus 441 ~~-~v~f~~~~-~~~~~l~~~l~~~-G~~~~~~---~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~ 500 (541)
.+ ++++..++ .+..++++.|.++ |+.+... ..++++|+|++.+++ +|++++++.|+++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 290 SPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred CCceEEEECCCCCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 33 33455443 4788999999998 9876532 234689999988776 999999999998763
No 39
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.97 E-value=3.2e-29 Score=260.31 Aligned_cols=356 Identities=17% Similarity=0.187 Sum_probs=249.2
Q ss_pred CCCCCCCCCc-HHHHHHHHHHh-CCCCCCC---------CCceee--------eecC---CCCcccHHHHHHHHHHhhcc
Q 009181 100 WTELPRAGLG-VGVIEKLKEEK-GKDVVWQ---------GKCSGT--------VYIG---GSEAEGHFSLINEACSMFAH 157 (541)
Q Consensus 100 ~~~lP~~g~~-~~i~~~l~~~~-~~~~~~~---------~~~~g~--------~y~~---~~~~~~~~~~~~~~~~~~~~ 157 (541)
...||++|++ +.|...|.++. .+..+|. +++++. +|+| ..+ +.+..-++
T Consensus 27 ~~~~p~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~rv~~~~~~~~~~~~~hgigr~~~---l~~~q~ka------ 97 (444)
T TIGR03531 27 QRKIPEEGWDDETIELFLHELSVMDTNNFPNNVGVGEREGRVFSKLVARRHYRFCHGIGRSGD---LVAPQPKA------ 97 (444)
T ss_pred cCcCCccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccceeechhhhhcccceecCCCCccc---ccccCccc------
Confidence 4469999999 99999988883 3555563 567776 6666 222 22222221
Q ss_pred cCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHH-HHHHHHHHHHHHHHHhhcCCCCCeEEecCCcc
Q 009181 158 TNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGT-ESILLAVKSSRDYMRNKRGITRPEMIIPVSAH 236 (541)
Q Consensus 158 ~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt-~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h 236 (541)
..++...++..++..++++++|.+... .+++++||| .++.+++.+++.+. .+| ++|+++..+|
T Consensus 98 ------~gss~~~~l~~~~e~~~~~~~G~~~~~-----~a~~v~~~Tg~al~laL~alr~~~--~~g---d~VI~p~~th 161 (444)
T TIGR03531 98 ------AGSSLLYKLTNKLVKDFLKLLGLRSIK-----SAFVVPLATGMSLSLCLSALRHKR--PKA---KYVIWPRIDQ 161 (444)
T ss_pred ------cCccHHHHHHHHHHHHHHHHcCCCCCC-----EEEEECCHHHHHHHHHHHHcCCcC--CCC---CEEEEECcCh
Confidence 224557788888999999999998443 348899999 79999988876311 124 8999999999
Q ss_pred chHHHHHhhcCCeEEEeeC--C-CCCccCHHHHHHhhcc---CceEEEee-cCCCCCccccCHHHHHHHHHHcCCEEEEe
Q 009181 237 SAYDKAAQYFNIKLWRVPV--D-KEFRADVKAIKKYINR---NTVLIVGS-APGFPHGIIDPIQELGELALSHGTCLHVD 309 (541)
Q Consensus 237 ~s~~ka~~~~G~~v~~v~~--~-~~~~~d~~~Le~~i~~---~t~~vv~~-~~~~~~G~id~i~~I~~la~~~~i~lhvD 309 (541)
.|+.+++.++|++++.|++ + +++.+|+++|+++|++ ++++++++ .++++.|..||+++|+++|++||+|+|+|
T Consensus 162 ~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvD 241 (444)
T TIGR03531 162 KSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVN 241 (444)
T ss_pred HHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEE
Confidence 9999999999999999995 3 4899999999999985 34444444 44566779999999999999999999999
Q ss_pred CCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCC
Q 009181 310 LCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSR 389 (541)
Q Consensus 310 ~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr 389 (541)
+|||.....+.. .+.-.+....+|++++++||++..|.++|+++++++++.+... ..|.+. .
T Consensus 242 aAyg~~~~~~~~-----~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~---~~y~g~----------~ 303 (444)
T TIGR03531 242 NAYGLQSNKYME-----LINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEIS---KSYPGR----------A 303 (444)
T ss_pred CcCcCcChhhhh-----hhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHH---HhccCC----------C
Confidence 999864321111 0000111123799999999998888888887788887664322 123221 1
Q ss_pred CCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC---CCeEEecCCCe-eEEEEecC---CCCHHHHHHHHHh
Q 009181 390 PGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI---PELFIIGRPDM-TIVAFGSD---VVDIFEVNDIMSS 462 (541)
Q Consensus 390 ~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~-~~v~f~~~---~~~~~~l~~~l~~ 462 (541)
.......+|+++..+|.+++++++++..++++++.+.|+++ -|.+++..|.. .-+++... +.+...+...|-.
T Consensus 304 ~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~ 383 (444)
T TIGR03531 304 SASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYS 383 (444)
T ss_pred CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHHh
Confidence 22335689999999999999999999999999999999875 35677755432 22334333 3467788888887
Q ss_pred CCce----ecc-------------CCC-----C-CeEEEEecC-CCHHHHHHHHHHHHHH
Q 009181 463 KGWH----LNP-------------LQR-----P-NSIHICVTL-QHVAVVDVFLRDLRES 498 (541)
Q Consensus 463 ~G~~----~~~-------------~~~-----~-~~iRi~~~~-~~~e~id~~i~~L~~~ 498 (541)
+++. +.. ++. | .++-++... .+.+|||.|++.|+++
T Consensus 384 ~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 384 RRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 7631 111 110 0 122222222 2349999999999875
No 40
>PRK14012 cysteine desulfurase; Provisional
Probab=99.97 E-value=6.5e-28 Score=253.19 Aligned_cols=305 Identities=21% Similarity=0.256 Sum_probs=224.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhh---cC
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY---FN 247 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~---~G 247 (541)
+...++++.+++++|.++++ + ++|+|+|+++.+++.++.... .++| ++|+++..+|+++..+++. .|
T Consensus 49 ~~~~~~r~~ia~~~g~~~~~----v--~~~~g~t~al~~~l~~l~~~~-~~~g---d~Vi~~~~~~~s~~~~~~~~~~~g 118 (404)
T PRK14012 49 EAVDIARNQIADLIGADPRE----I--VFTSGATESDNLAIKGAAHFY-QKKG---KHIITSKTEHKAVLDTCRQLEREG 118 (404)
T ss_pred HHHHHHHHHHHHHcCcCcCe----E--EEeCCHHHHHHHHHHHHHHhh-cCCC---CEEEEecCccHHHHHHHHHHHhCC
Confidence 44456888999999998765 5 899999999999998875321 1355 8999999999998766554 49
Q ss_pred CeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCC
Q 009181 248 IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPI 327 (541)
Q Consensus 248 ~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~ 327 (541)
++++.+++++++.+|+++++++|+++|++|++++++|++|.+.|+++|.++|+++|+++|+|++++.+..
T Consensus 119 ~~~~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~---------- 188 (404)
T PRK14012 119 FEVTYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKV---------- 188 (404)
T ss_pred CEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCc----------
Confidence 9999999998999999999999999999999999999999999999999999999999999999865443
Q ss_pred CCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHH
Q 009181 328 PPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQE 407 (541)
Q Consensus 328 p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~ 407 (541)
+++....++|++++++||+ ++|.|+|+++++++...+ ..+.+.|+........|+.....+++.-+++... ..
T Consensus 189 -~~~~~~~~~D~~~~s~~K~-~gp~g~G~l~~~~~~~~~----~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-~~ 261 (404)
T PRK14012 189 -PIDLSKLKVDLMSFSAHKI-YGPKGIGALYVRRKPRVR----LEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIA-KE 261 (404)
T ss_pred -ccCcccCCCCEEEEehhhc-cCCCceEEEEEecCCCCC----CCceecCCCccCCccCCCcCHHHHHHHHHHHHHH-Hh
Confidence 2445556899999999996 789999998888764321 1111222211111122333333344555666544 34
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----CeeEEEEecCCCCHHHHHHHHHhCCc----eecc---------
Q 009181 408 GYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----DMTIVAFGSDVVDIFEVNDIMSSKGW----HLNP--------- 469 (541)
Q Consensus 408 g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----~~~~v~f~~~~~~~~~l~~~l~~~G~----~~~~--------- 469 (541)
+..+..++...+++++.+.|++++++++.+++ ....++|... +..++...|.+.++ .+..
T Consensus 262 ~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~ 339 (404)
T PRK14012 262 EMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV--EGESLIMALKDLAVSSGSACTSASLEPSYVL 339 (404)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc--CHHHHHHhCCCeEEEchhhhCCCCCCCCHHH
Confidence 67778899999999999999999999877542 1224555543 33456665543221 1111
Q ss_pred --CC-----CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 470 --LQ-----RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 470 --~~-----~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
++ .++.+|++++..++ +|+|++++.|+++++.++.
T Consensus 340 ~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~ 382 (404)
T PRK14012 340 RALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLRE 382 (404)
T ss_pred HHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11 23689999998877 9999999999999988753
No 41
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.97 E-value=8.6e-28 Score=263.54 Aligned_cols=381 Identities=16% Similarity=0.161 Sum_probs=271.3
Q ss_pred CCCCCC--CCCCc-HHHHHHHHHHhCCCCCCC--CCceeeeecCCCCcccHHHHHHHHHHhhcccCCCCc-ccchHHHHH
Q 009181 99 WWTELP--RAGLG-VGVIEKLKEEKGKDVVWQ--GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHL-DIFQSVARF 172 (541)
Q Consensus 99 ~~~~lP--~~g~~-~~i~~~l~~~~~~~~~~~--~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~~~~~~~ 172 (541)
.....| .++.| .|+++++.++...+.... --+.|+.-+--+. ....+-.....|....|+.+ +.++|..++
T Consensus 468 ~~~~~p~f~~~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~---~~~~~p~s~~eF~t~hPyqp~e~sQG~lq~ 544 (954)
T PRK12566 468 AYLQHPVFNAHHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNA---TSEMIPITWPEFAQLHPFAPREQAEGYRAM 544 (954)
T ss_pred ccccCcccccCCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCc---HHhhhcccchhhhcCCCCCchhhhcCHHHH
Confidence 334455 35678 999999999966554433 2233432222122 22322224455666689999 999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcC-cHHHHHHHHHHHHHHHHHhhcC-CCCCeEEecCCccchHHHHHhhcCCeE
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTS-GGTESILLAVKSSRDYMRNKRG-ITRPEMIIPVSAHSAYDKAAQYFNIKL 250 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~-Ggt~a~~~al~a~r~~~~~~~G-i~~~~vi~~~~~h~s~~ka~~~~G~~v 250 (541)
-.|+++|+++++|++.. .+.+ +|+.+.+.++++.|.+... +| -.+++|+++..+|.+....+...|+++
T Consensus 545 i~elq~~l~eLtGmd~~--------Sl~p~sGA~gE~A~Lmair~yh~~-~Ge~~r~~vLIp~saHgtNpasa~~~GieV 615 (954)
T PRK12566 545 IDELEAWLCAITGFDAI--------CMQPNSGAQGEYAGLLAIRRYHRS-RGQSQRDICLIPSSAHGTNPASAQMAGMRV 615 (954)
T ss_pred HHHHHHHHHHHHCCCeE--------eecCCchHHHHHHHHHHHHHHHHh-cCCCCCCEEEecccccccCHHHHHHCCCEE
Confidence 99999999999999864 4555 6888888888888865543 23 235789999999987777788899999
Q ss_pred EEeeCCCCCccCHHHHHHhhc---cCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCC
Q 009181 251 WRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPI 327 (541)
Q Consensus 251 ~~v~~~~~~~~d~~~Le~~i~---~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~ 327 (541)
+.||++++|.+|+++|+++++ +++.+|++++|++..+..+|+++|+++||++|+++++|+++.-...
T Consensus 616 v~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~---------- 685 (954)
T PRK12566 616 VIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQV---------- 685 (954)
T ss_pred EEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhcc----------
Confidence 999999999999999999997 6899999999998666667799999999999999999999742111
Q ss_pred CCCC-cCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCcc-CCCcccCCCC------CchHHHHHH
Q 009181 328 PPFD-FSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLY-VSPTVAGSRP------GGLIAGAWA 399 (541)
Q Consensus 328 p~~~-~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gsr~------~~~~a~~~~ 399 (541)
.++ ....|+|++.+++|||+++|.|.|...++.-..+.+.....+.|++-.. ....-.|..+ +..+...|.
T Consensus 686 -~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~ 764 (954)
T PRK12566 686 -GLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWM 764 (954)
T ss_pred -CCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHH
Confidence 122 3578899999999999888888776555542333322223344432110 0000012221 122456677
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC---CCeeEEEEecC------CCCHHHHHHHHHhCCceeccC
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR---PDMTIVAFGSD------VVDIFEVNDIMSSKGWHLNPL 470 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~---~~~~~v~f~~~------~~~~~~l~~~l~~~G~~~~~~ 470 (541)
-+..+|.+ +++..+....+++|++++|.+..++.. .+ +.+..+.+... +.+..+++++|.+.|++....
T Consensus 765 Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~-~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~ 842 (954)
T PRK12566 765 YIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLY-RGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTM 842 (954)
T ss_pred HHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCc-CCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEE
Confidence 77778998 888899899999999999987434333 22 21233333322 246788999999999876543
Q ss_pred --CCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 471 --QRPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 471 --~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
..++.+|+|+|.+++ +|+|+|+++|+++.+++.+
T Consensus 843 ~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~ 879 (954)
T PRK12566 843 SFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIGK 879 (954)
T ss_pred eeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 235789999999988 9999999999999988654
No 42
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.97 E-value=5.6e-28 Score=253.78 Aligned_cols=301 Identities=18% Similarity=0.157 Sum_probs=225.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH----HHHhhc
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD----KAAQYF 246 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~----ka~~~~ 246 (541)
.++.+..+ + +++|+++++ + ++|+|+|+++..++.++.. +|-..++|+++..+|++.. ..++..
T Consensus 71 ~~~~~~~~-~-~l~g~~~~~----v--~~~~~~t~~l~~~~~~~~~-----~~~~~~~i~~~~~~~~s~~~~~~~~~~~~ 137 (406)
T TIGR01814 71 TLDESLLK-L-RLVGAKEDE----V--VVMNTLTINLHLLLASFYK-----PTPKRYKILLEAKAFPSDHYAIESQLQLH 137 (406)
T ss_pred hhhhhhcc-c-cccCCCCCc----E--EEeCCchHHHHHHHHHhcC-----CcCCccEEEecCCCCChHHHHHHHHHHhc
Confidence 34444444 4 899998775 6 9999999999999887621 2211147888889999843 345677
Q ss_pred CCeE----EEeeCCCCCccCHHHHHHhhc---cCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhh
Q 009181 247 NIKL----WRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPF 319 (541)
Q Consensus 247 G~~v----~~v~~~~~~~~d~~~Le~~i~---~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f 319 (541)
|+++ +.++.++++.+|+++++++++ ++|++|+++++++.+|.+.|+++|+++|+++|++++||++++.+.+
T Consensus 138 g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~-- 215 (406)
T TIGR01814 138 GLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNV-- 215 (406)
T ss_pred CCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCc--
Confidence 9887 566666678899999999874 7899999999999999999999999999999999999999876554
Q ss_pred hhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCcc-------------CCCccc
Q 009181 320 AKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLY-------------VSPTVA 386 (541)
Q Consensus 320 ~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 386 (541)
++++...|+|++++++|||+++|+| |+++++.+.... .......|.+... ......
T Consensus 216 ---------~id~~~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~~-~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (406)
T TIGR01814 216 ---------PLDLHDWGVDFACWCTYKYLNAGPG-AGAFVHEKHAHT-ERPRLAGWWGHARPTRFKMDNTLGLIPCGFRI 284 (406)
T ss_pred ---------ccccccCCCCEEEEcCccccCCCCC-eEEEEehhhhhh-cCCCCCcccCCCCccccccccccCCCccceee
Confidence 3677778999999999999887888 655665543321 1111122322110 001112
Q ss_pred CCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC----CCeEEecCCC----eeEEEEecCCCCHHHHHH
Q 009181 387 GSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI----PELFIIGRPD----MTIVAFGSDVVDIFEVND 458 (541)
Q Consensus 387 gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~----~~~v~f~~~~~~~~~l~~ 458 (541)
|+.+-..++++.++++.+...|.+++.++...+++++++.|+++ ++++++++.. .++++|..+ .+..++.+
T Consensus 285 GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~~~~~~~ 363 (406)
T TIGR01814 285 SNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VPGKAVFQ 363 (406)
T ss_pred CCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CCHHHHHH
Confidence 44444567788888888888889999999999999999999875 4699887632 457888876 57788999
Q ss_pred HHHhCCceeccCCCCCeEEEEe-cCCCH-HHHHHHHHHHHHHH
Q 009181 459 IMSSKGWHLNPLQRPNSIHICV-TLQHV-AVVDVFLRDLRESV 499 (541)
Q Consensus 459 ~l~~~G~~~~~~~~~~~iRi~~-~~~~~-e~id~~i~~L~~~~ 499 (541)
.|.++|+.+. ...++.+|+|+ +.+|+ +|+|++++.|++++
T Consensus 364 ~L~~~gi~v~-~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 364 ALIKRGVIGD-KREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred HHHHCCEEEe-ccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 9999998665 33346899999 56777 99999999998864
No 43
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=9.2e-28 Score=251.73 Aligned_cols=356 Identities=17% Similarity=0.166 Sum_probs=241.4
Q ss_pred HHHHHHHHHhCCCCCCC-C-CceeeeecCCCCcccHHHHHHHHHHhh-c--ccCCCCcccchHHHHHHHHHHHHHHHHhC
Q 009181 111 GVIEKLKEEKGKDVVWQ-G-KCSGTVYIGGSEAEGHFSLINEACSMF-A--HTNPLHLDIFQSVARFEAEVIAMTAALLG 185 (541)
Q Consensus 111 ~i~~~l~~~~~~~~~~~-~-~~~g~~y~~~~~~~~~~~~~~~~~~~~-~--~~n~~~~~~~~~~~~~e~ev~~~la~l~g 185 (541)
+|++++.++...+.+.. + -..+..-+++.. +..+.++.... . ..+++++..+.+..++..++++++++++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~----p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g 78 (398)
T cd00613 3 EVLRHLKRLASKNKALDQSMSFLGSGTYKHNP----PAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTG 78 (398)
T ss_pred HHHHHHHHHHhcCcCcccCcccccccccCCcC----cHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHC
Confidence 78888888744333222 1 111222223332 34444433332 1 11222333367888999999999999999
Q ss_pred CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcC----CeEEEeeCCCCCcc
Q 009181 186 NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFN----IKLWRVPVDKEFRA 261 (541)
Q Consensus 186 ~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G----~~v~~v~~~~~~~~ 261 (541)
.+.++ + +++++|+++...++.+++.. .++| ++|+++.+.|+++..++..+| ++++.+|+++++.+
T Consensus 79 ~~~~~----v--~~~~~g~~~~~~~~~~~~~~--~~~g---d~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 147 (398)
T cd00613 79 MDVAN----A--SLQDEATAAAEAAGLAAIRA--YHKR---NKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTV 147 (398)
T ss_pred CCccc----e--eccCchHHHHHHHHHHHHhc--ccCC---CEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCc
Confidence 97654 3 56665665555555555421 1135 899999999999999888887 99999999877889
Q ss_pred CHHHHHHhhccCceEEEeecCCCCCccccCH-HHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEE
Q 009181 262 DVKAIKKYINRNTVLIVGSAPGFPHGIIDPI-QELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSI 340 (541)
Q Consensus 262 d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i-~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsi 340 (541)
|+++++++++++|++|++++|+ ++|.+.|+ ++|+++|++||+++|+|++++.+..+ .+....++|++
T Consensus 148 d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~-----------~~~~~~~~d~~ 215 (398)
T cd00613 148 DLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGL-----------KPPGEYGADIV 215 (398)
T ss_pred CHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCC-----------CChHHcCCCEE
Confidence 9999999999999999999986 79999885 99999999999999999997643321 22334578999
Q ss_pred EeCCCCCCCCC-----CCceEEEEecccccccccccccccCCCc------cC--CC------cccCC-----CCCchHHH
Q 009181 341 SVDVHKYGLAP-----KGTSVVLYRNREIRKHQFVAVTEWSGGL------YV--SP------TVAGS-----RPGGLIAG 396 (541)
Q Consensus 341 s~~~hK~~~~p-----~g~g~ll~~~~~~~~~~~~~~~~~~~~~------~~--~~------~~~gs-----r~~~~~a~ 396 (541)
+.++|||+ .| .++|+++.++ ++..........|.... +. .+ ...|+ ......+.
T Consensus 216 ~~s~~K~~-~p~g~Ggp~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~ 293 (398)
T cd00613 216 VGNLQKTG-VPHGGGGPGAGFFAVKK-ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALM 293 (398)
T ss_pred EeeccccC-CCCCCCCCceeEEEEhh-hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHH
Confidence 99999997 65 4567665544 33332111111111000 00 00 00011 11123446
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC---CCHHHHHHHHHhCCceeccC--C
Q 009181 397 AWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV---VDIFEVNDIMSSKGWHLNPL--Q 471 (541)
Q Consensus 397 ~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~---~~~~~l~~~l~~~G~~~~~~--~ 471 (541)
.++++..++.++++++.++..++++++++.|+++++......+....++|..+. .+..++++.|.++|+.+... .
T Consensus 294 a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~~~ 373 (398)
T cd00613 294 AAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYLP 373 (398)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccccC
Confidence 677777889999999999999999999999999865543323345566777653 35678999999999876543 2
Q ss_pred CCCeEEEEecCCCH-HHHHHHHHHH
Q 009181 472 RPNSIHICVTLQHV-AVVDVFLRDL 495 (541)
Q Consensus 472 ~~~~iRi~~~~~~~-e~id~~i~~L 495 (541)
.++.+|++++.+++ +|+|++++.|
T Consensus 374 ~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 374 VDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 45789999999988 9999998764
No 44
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.96 E-value=3.3e-28 Score=243.41 Aligned_cols=331 Identities=19% Similarity=0.261 Sum_probs=230.0
Q ss_pred HHHHHHHHHhhcccCCCCc-ccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC
Q 009181 145 FSLINEACSMFAHTNPLHL-DIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (541)
Q Consensus 145 ~~~~~~~~~~~~~~n~~~~-~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G 223 (541)
.+.+.+++..+ ..||... ..+.....+|+ .++.+|+++|+++.+ | +||+|+|||+.++++.......+ +
T Consensus 60 ldam~~~~~~~-~~nPh~~~y~w~~~~~~E~-aR~~VAklInAd~~d----I--iFts~ATEs~Nlvl~~v~~~~~~--~ 129 (428)
T KOG1549|consen 60 LDAMLPYLLEY-LGNPHSRSYGWKAEDAVEA-AREQVAKLINADPSD----I--VFTSGATESNNLVLKGVARFFGD--K 129 (428)
T ss_pred HHHHHHHHHHh-hcCCCccccchhhhHHHHH-HHHHHHHHhCCCCCc----E--EEeCCchHHHHHHHHHhhccccc--c
Confidence 34444444443 3444443 22333333554 999999999999987 7 99999999999999987421111 1
Q ss_pred CCCCeEEecCCccchHHHHHhhc---CCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHH
Q 009181 224 ITRPEMIIPVSAHSAYDKAAQYF---NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELAL 300 (541)
Q Consensus 224 i~~~~vi~~~~~h~s~~ka~~~~---G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~ 300 (541)
.+.+||+...+|+++...++.+ |++++.+|++.++..|.+.++++|+++|++|.+.+.||..|++.|+++|.++|+
T Consensus 130 -~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr 208 (428)
T KOG1549|consen 130 -TKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPVKEIVKICR 208 (428)
T ss_pred -ccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCccccccHHHHHHHhC
Confidence 1238999999999998888777 899999999999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCcc
Q 009181 301 SHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLY 380 (541)
Q Consensus 301 ~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~ 380 (541)
++|+.+|+|+|++-+.. +.|....++|+++++.||| |+|+|+|++++|.+ .......+.+.||..
T Consensus 209 ~~~v~v~~DaAQavG~i-----------~vDV~eln~D~~s~s~HK~-ygp~~iGaLYvr~~---~~~~~~~p~~~GGgq 273 (428)
T KOG1549|consen 209 EEGVQVHVDAAQAVGKI-----------PVDVQELNADFLSISAHKI-YGPPGIGALYVRRK---RPRLRVEPPLSGGGQ 273 (428)
T ss_pred cCCcEEEeehhhhcCCc-----------cccHHHcCchheeeecccc-cCCCcceEEEEccC---CCcccccCcccCCcc
Confidence 99999999999754433 5888999999999999999 88888999888852 222334455666654
Q ss_pred CCCcccCCCCCchHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHHHHHhh-cCCCeEEecCCC-----eeEEEEecC-CC
Q 009181 381 VSPTVAGSRPGGLIAGAWAALMSLGQE--GYLENTKAIMEVSESIQKGIK-EIPELFIIGRPD-----MTIVAFGSD-VV 451 (541)
Q Consensus 381 ~~~~~~gsr~~~~~a~~~~al~~lg~~--g~~~~~~~~~~~a~~l~~~L~-~~~~~~v~~~~~-----~~~v~f~~~-~~ 451 (541)
......|++....+.+.-.+.+....+ ....+.++ ....+...+. +.++..+.+++. +..+.|.+. +.
T Consensus 274 ~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~---~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~ 350 (428)
T KOG1549|consen 274 ERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKR---LSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEGE 350 (428)
T ss_pred ccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHH---HHHHHHHHHhhhCchhhccCCcccccccceeeecccccCc
Confidence 444445566555566666666655322 23333332 4445555553 356666666533 333344321 11
Q ss_pred C-HHHHHHHHHhCCc-----------eeccCC-----CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 452 D-IFEVNDIMSSKGW-----------HLNPLQ-----RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 452 ~-~~~l~~~l~~~G~-----------~~~~~~-----~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
. ..+..+.....|. .+...+ ...++||+++.+++ +|++++++.+++.++.++.
T Consensus 351 ~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~ 421 (428)
T KOG1549|consen 351 SLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLRE 421 (428)
T ss_pred chhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccc
Confidence 1 1111122222221 011111 12689999999988 9999999999999887664
No 45
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.96 E-value=5.6e-27 Score=241.80 Aligned_cols=274 Identities=22% Similarity=0.228 Sum_probs=213.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHH---h
Q 009181 168 SVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA---Q 244 (541)
Q Consensus 168 ~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~---~ 244 (541)
...+..+++++++++++|.++++ + ++|+|+|+++..++.++...... +| +++|+++...|+++.... +
T Consensus 39 ~~~~~~~~~r~~la~~~g~~~~~----v--~~~~g~t~a~~~~l~~l~~~~~~-~g--~~~vi~~~~~~~s~~~~~~~~~ 109 (353)
T TIGR03235 39 NAKKAVERARKQVAEALGADTEE----V--IFTSGATESNNLAILGLARAGEQ-KG--KKHIITSAIEHPAVLEPIRALE 109 (353)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCe----E--EEeCCHHHHHHHHHHHHHHhccc-CC--CCeeeEcccccHHHHHHHHHHH
Confidence 34466777999999999998765 6 89999999999999887642111 11 267999999999976554 4
Q ss_pred hcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcC
Q 009181 245 YFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLG 324 (541)
Q Consensus 245 ~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g 324 (541)
..|++++.+|+++++.+|++++++++++++++|++++++||+|.+.|+++|.++|+++|+++|||++++.+..
T Consensus 110 ~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~------- 182 (353)
T TIGR03235 110 RNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKI------- 182 (353)
T ss_pred hcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCc-------
Confidence 4699999999988899999999999999999999999999999999999999999999999999999765544
Q ss_pred CCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHH
Q 009181 325 YPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL 404 (541)
Q Consensus 325 ~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l 404 (541)
+++....++|++++++||| ++|.|+|+++++++...... ..+.+.++........|+.+-..++++.++++.+
T Consensus 183 ----~~~~~~~~~D~~~~s~~K~-~gp~g~g~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~ 255 (353)
T TIGR03235 183 ----TVDLSADRIDLISCSGHKI-YGPKGIGALVIRKRGKPKAP--LKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIA 255 (353)
T ss_pred ----cccccccCCCEEEeehhhc-CCCCceEEEEEccCcccccc--cCceeeCCCCcCccccCCCChHHHHHHHHHHHHH
Confidence 3566677899999999999 79999999888876332111 1111122111122334555556677888888765
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC---eeEEEEecCCCCHHHHHHHHHhCCcee
Q 009181 405 GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD---MTIVAFGSDVVDIFEVNDIMSSKGWHL 467 (541)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~f~~~~~~~~~l~~~l~~~G~~~ 467 (541)
. ++.++..+++.++++++++.|++ +|++++.++. ..+++|..++.+..++.+.|.+ ++.+
T Consensus 256 ~-~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i~v 318 (353)
T TIGR03235 256 R-RNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDGVNSEALIVNLRA-DAAV 318 (353)
T ss_pred H-hhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-CeEE
Confidence 3 68889999999999999999988 6999986543 4578888777788899999975 5443
No 46
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=3e-26 Score=239.07 Aligned_cols=298 Identities=15% Similarity=0.127 Sum_probs=218.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEE
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLW 251 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~ 251 (541)
...++++.+++++|.+. + ++|+|+|+++..++.++.. +| ++|+++...|++...+++..|++++
T Consensus 64 ~~~~l~~~lA~~~g~~~------~--~~~~g~t~a~~~al~~l~~-----~g---d~Vlv~~~~h~s~~~~~~~~G~~~~ 127 (387)
T PRK09331 64 PIADFHEDLAEFLGMDE------A--RVTHGAREGKFAVMHSLCK-----KG---DYVVLDGLAHYTSYVAAERAGLNVR 127 (387)
T ss_pred HHHHHHHHHHHHhCCCc------E--EEeCCHHHHHHHHHHHhcC-----CC---CEEEECCCchHHHHHHHHHcCCEEE
Confidence 34557779999999863 3 7899999999999988753 66 8999999999999999999999999
Q ss_pred EeeC--CCCCccCHHHHHHhhcc-------CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 252 RVPV--DKEFRADVKAIKKYINR-------NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 252 ~v~~--~~~~~~d~~~Le~~i~~-------~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
.+|+ ++++.+|++++++++++ ++.+|+++++++++|.+.|+++|+++|++||+++|||++|+.+.+|
T Consensus 128 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~---- 203 (387)
T PRK09331 128 EVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMP---- 203 (387)
T ss_pred EEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcC----
Confidence 9999 66888999999999974 6899999999999999999999999999999999999999865543
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCc-ccCCCCCchHHHHHHHH
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPT-VAGSRPGGLIAGAWAAL 401 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gsr~~~~~a~~~~al 401 (541)
++....|+|+++.++||++.+|.|+|+++.++ +...........|... ... ..++...+.++++++++
T Consensus 204 -------~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~-~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~aal 272 (387)
T PRK09331 204 -------VDGKKLGADFIVGSGHKSMAASAPSGVLATTE-EYADKVFRTSRKFGVK---EVELLGCTLRGAPLVTLMASF 272 (387)
T ss_pred -------CCHHHcCCCEEEeeCcccccCCCCEEEEEECH-HHHhhcccccCCCccc---ceeeeceecCchHHHHHHHHH
Confidence 44456689999999999988889999866654 4333221111111100 000 11111222344556666
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEEecCCC---------CHHHHHHHHHhCCceeccC
Q 009181 402 MSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAFGSDVV---------DIFEVNDIMSSKGWHLNPL 470 (541)
Q Consensus 402 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~~~~~---------~~~~l~~~l~~~G~~~~~~ 470 (541)
..+... .+..++..++++++++.|++++|++++.+ ...+++.+..+.. +..++.+.|.++|+.....
T Consensus 273 ~~~~~~--~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~ 350 (387)
T PRK09331 273 PHVVER--VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKP 350 (387)
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEcc
Confidence 544322 24566677889999999999999999853 2356666664421 2356889999999863333
Q ss_pred CCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 471 QRPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 471 ~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
+....+|+.....+.+|++++++.|+++++++
T Consensus 351 ~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 351 GATKEFKLSTYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred CCceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 33344565443334599999999999998764
No 47
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.96 E-value=6.3e-27 Score=245.07 Aligned_cols=331 Identities=14% Similarity=0.068 Sum_probs=247.4
Q ss_pred HHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC
Q 009181 144 HFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (541)
Q Consensus 144 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G 223 (541)
.++.+.+++..... .| ..+...++.+++++++++++|.+... .+ +++++||+++..++....+ +|
T Consensus 20 ~~~~V~~a~~~~~~---~~--~~~~~~~~~~~~~~~l~~~~g~~~~~---~v--i~~~~gt~a~~~a~~~~~~-----~G 84 (401)
T PLN02409 20 IPERVLRAMNRPNE---DH--RSPAFPALTKELLEDVKYIFKTKSGT---PF--IFPTTGTGAWESALTNTLS-----PG 84 (401)
T ss_pred CCHHHHHHhcCCCC---CC--CCHHHHHHHHHHHHHHHHHhCCCCCC---EE--EEeCCcHHHHHHHHHhcCC-----CC
Confidence 45556666543221 12 25677888889999999999997654 13 8899999999888876542 66
Q ss_pred CCCCeEEecCCccchH--HHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc----CceEEEeecCCCCCccccCHHHHHH
Q 009181 224 ITRPEMIIPVSAHSAY--DKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR----NTVLIVGSAPGFPHGIIDPIQELGE 297 (541)
Q Consensus 224 i~~~~vi~~~~~h~s~--~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~----~t~~vv~~~~~~~~G~id~i~~I~~ 297 (541)
++|++++..|++. ...++..|++++.++.+.+..+|++++++++++ ++++|++++++|+||.+.|+++|.+
T Consensus 85 ---d~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~ 161 (401)
T PLN02409 85 ---DKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRK 161 (401)
T ss_pred ---CEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHH
Confidence 8999999999875 577888899999999987666899999999986 7899999999999999999999999
Q ss_pred H--HHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccc----ccc
Q 009181 298 L--ALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQ----FVA 371 (541)
Q Consensus 298 l--a~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~----~~~ 371 (541)
+ |+++|++++||++++.+.. +++...+|+|++.+++|||+++|.|+|+++++++.+.... ...
T Consensus 162 l~~~~~~g~~~vvD~v~s~g~~-----------~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~ 230 (401)
T PLN02409 162 LLDCAQHPALLLVDGVSSIGAL-----------DFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRV 230 (401)
T ss_pred HHhhhccCcEEEEEcccccCCc-----------cccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCe
Confidence 9 9999999999999763332 4677778999999999999999999998777654322110 001
Q ss_pred ccccCCCc-c--CCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-C---eeEE
Q 009181 372 VTEWSGGL-Y--VSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-D---MTIV 444 (541)
Q Consensus 372 ~~~~~~~~-~--~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~---~~~v 444 (541)
..+|.... + ......++.+-..++++..+++.+...|++++.++..++++++++.|+++ |++++.+. . ..++
T Consensus 231 ~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~ 309 (401)
T PLN02409 231 FFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVT 309 (401)
T ss_pred ecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceE
Confidence 11110000 0 00000123333457788889998888899999999999999999999987 89988752 2 2566
Q ss_pred EEecC-CCCHHHHHHHHH-hCCceeccC-C--CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 445 AFGSD-VVDIFEVNDIMS-SKGWHLNPL-Q--RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 445 ~f~~~-~~~~~~l~~~l~-~~G~~~~~~-~--~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
+|..+ +.+..++.+.|. +.|+.+..- + ....+|++...+++ +|+.+++++|++++.++..
T Consensus 310 ~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g~ 375 (401)
T PLN02409 310 AVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVGY 375 (401)
T ss_pred EEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 77764 457778887775 557655432 1 24689999877776 9999999999999887653
No 48
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.96 E-value=1.7e-26 Score=239.24 Aligned_cols=307 Identities=16% Similarity=0.163 Sum_probs=226.9
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCC-CCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeE-EecCCccch-HHHHH
Q 009181 167 QSVARFEAEVIAMTAALLGNKEK-ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEM-IIPVSAHSA-YDKAA 243 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~-~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~v-i~~~~~h~s-~~ka~ 243 (541)
+...+..+++++.+++++|++++ . .+ ++|+|||+++..++.++.. +| +++ +++...|.+ +.+.+
T Consensus 31 ~~~~~~~~~~r~~la~l~~~~~~~~---~i--~~t~~~t~al~~~~~~l~~-----~~---~~vlv~~~~~~~~~~~~~a 97 (363)
T TIGR02326 31 SDYNIVVEQIRQQLLALATAEEGYT---SV--LLQGSGTFAVEAVIGSAVP-----KD---GKLLVVINGAYGARIVQIA 97 (363)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCce---EE--EEcCCCHHHHHHHHHhcCC-----CC---CeEEEEeCChhhHHHHHHH
Confidence 34555667799999999999754 2 15 8999999999999988742 33 454 545555655 35778
Q ss_pred hhcCCeEEEeeCCCCCccCHHHHHHhhccC--ceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 244 QYFNIKLWRVPVDKEFRADVKAIKKYINRN--TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 244 ~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~--t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
+..|++++.+|+++++.+|+++++++++++ +.++.+++++|+||.+.|+++|+++|++||++++||++++.+..
T Consensus 98 ~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~---- 173 (363)
T TIGR02326 98 EYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGI---- 173 (363)
T ss_pred HHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCc----
Confidence 899999999999888899999999999854 56788999999999999999999999999999999998753332
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccc--------cCCCccCCCcccCCCCCch
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTE--------WSGGLYVSPTVAGSRPGGL 393 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~gsr~~~~ 393 (541)
+++....++|++..++|||+++|.|.|+++++++.+.. ....... |....+.......+.+...
T Consensus 174 -------~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~ 245 (363)
T TIGR02326 174 -------PIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAA-CKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHV 245 (363)
T ss_pred -------ccchhhcCccEEEecCccccccCCcceEEEECHHHHHH-hhcCCCceeecHHHHHHHHhccCCCCCCCCcHHH
Confidence 35666778999999999998999999988876653322 1100000 1000000000111233445
Q ss_pred HHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC--Ce-eEEEEecCC---CCHHHHHHHHHhCCce
Q 009181 394 IAGAWAALMSLGQE-GYLENTKAIMEVSESIQKGIKEIPELFIIGRP--DM-TIVAFGSDV---VDIFEVNDIMSSKGWH 466 (541)
Q Consensus 394 ~a~~~~al~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~-~~v~f~~~~---~~~~~l~~~l~~~G~~ 466 (541)
+.++.++++.+..+ +++++.+++.++++++.+.|+++ |++++.++ .. .+++|..++ .+..++.+.|.++|+.
T Consensus 246 ~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~ 324 (363)
T TIGR02326 246 VHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFV 324 (363)
T ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCEE
Confidence 66777888777665 58889999999999999999988 88887553 23 346677654 3667899999999987
Q ss_pred eccCC--CCCeEEEEecCCCH-HHHHHHHHHHHHHH
Q 009181 467 LNPLQ--RPNSIHICVTLQHV-AVVDVFLRDLRESV 499 (541)
Q Consensus 467 ~~~~~--~~~~iRi~~~~~~~-e~id~~i~~L~~~~ 499 (541)
+.... .++.+|+++...++ +|++++++.|++++
T Consensus 325 v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 325 IYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred EECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 75432 24689999754444 99999999999875
No 49
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=2.7e-26 Score=237.46 Aligned_cols=294 Identities=14% Similarity=0.110 Sum_probs=213.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEe
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v 253 (541)
.++++.+++++|. ++ + ++|+|+|+++..++.++.. +| ++|+++..+|++...+++..|++++.+
T Consensus 47 ~~l~~~la~~~g~--~~----i--~~~~g~t~al~~~l~~~~~-----~g---d~Vl~~~~~~~~~~~~~~~~g~~~~~v 110 (361)
T cd06452 47 KDFHHDLAEFLGM--DE----A--RVTPGAREGKFAVMHSLCE-----KG---DWVVVDGLAHYTSYVAAERAGLNVREV 110 (361)
T ss_pred HHHHHHHHHHcCC--ce----E--EEeCCHHHHHHHHHHHhcC-----CC---CEEEEcCCcchHHHHHHHhcCCEEEEE
Confidence 3466689999998 22 4 8999999999999988743 66 899999999999988999999999999
Q ss_pred eCCCC--CccCHHHHHHhhc-------cCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcC
Q 009181 254 PVDKE--FRADVKAIKKYIN-------RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLG 324 (541)
Q Consensus 254 ~~~~~--~~~d~~~Le~~i~-------~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g 324 (541)
+++++ +.+|+++++++++ +++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+..|
T Consensus 111 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~------ 184 (361)
T cd06452 111 PNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMP------ 184 (361)
T ss_pred ecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcC------
Confidence 99864 5899999999986 37899999999999999999999999999999999999999754332
Q ss_pred CCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHH
Q 009181 325 YPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL 404 (541)
Q Consensus 325 ~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l 404 (541)
++....|+|+++.++||++.+|.++|+++.++ ++..........|.... . ....++.....++++++++..+
T Consensus 185 -----~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~-~~~~~l~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~al~~~ 256 (361)
T cd06452 185 -----VSGKELGADFIVGSGHKSMAASAPIGVLATTE-EWADIVFRTSQMFKIKE-V-ELLGCTLRGAPLVTLMASFPHV 256 (361)
T ss_pred -----CCHHHcCCCEEEecCCccccCCCCeEEEEECH-HHHHHHhccccccccce-e-eeeccccCchHHHHHHHHHHHH
Confidence 33344578999999999987888899766654 33332211111121110 0 0111222222344556665543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEec--CCCeeEEEEecCCC---------CHHHHHHHHHhCCceeccCCCC
Q 009181 405 GQEGYLENTKAIMEVSESIQKGIKEIPELFIIG--RPDMTIVAFGSDVV---------DIFEVNDIMSSKGWHLNPLQRP 473 (541)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~f~~~~~---------~~~~l~~~l~~~G~~~~~~~~~ 473 (541)
.+. .+..++..++++++++.|+++|+++++. +...+++.+..... +..++.+.|.++|+.....+..
T Consensus 257 -~~~-~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~ 334 (361)
T cd06452 257 -KER-VKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIKPGLT 334 (361)
T ss_pred -HHH-HHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEcCCCc
Confidence 222 3445555667799999999999999884 33456777765421 2346899999999875444444
Q ss_pred CeEEEEecCCCHHHHHHHHHHHHHHH
Q 009181 474 NSIHICVTLQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 474 ~~iRi~~~~~~~e~id~~i~~L~~~~ 499 (541)
..+|++....+.++++.+++.|+++.
T Consensus 335 ~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 335 RYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred eEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 67888884445699999999998764
No 50
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=2.1e-26 Score=245.71 Aligned_cols=427 Identities=11% Similarity=0.052 Sum_probs=275.9
Q ss_pred cCCchhHhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHhcCcchhHHHHHHHhhhhcccCCCcccc---ccCC
Q 009181 23 QYEPVILLLAPLLTLLVARVLQSFLDAVREKGFKQTFVAFFMSSIKLVPGVNKYIEAEKQKVVDKMQSGVKSK---REGW 99 (541)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 99 (541)
..+||.+++.|++.|+++.++ +++++++.++++.. +..-++...+..++++..+.++ +...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (489)
T PLN02483 2 ITIPYLTALTTYFSYGLLFAF-------------GQLRDFFRAILDWW---KTSNLQGYAPICLGLEDFYIRRLYLRIQD 65 (489)
T ss_pred CCCchHHHHHHHHHHHHHHHH-------------HHHHHHHHHhcccc---ccccccCCCccccCHHHHHHHHhhhhccc
Confidence 468999999999999999887 55566666655311 1222234567777777776654 6778
Q ss_pred CCCCCCCCCcHHHHHHHHHHhCCCCCCC----------CCceeeeecCCCC-cccHHHHHHHHHHhhcccCCCCcccchH
Q 009181 100 WTELPRAGLGVGVIEKLKEEKGKDVVWQ----------GKCSGTVYIGGSE-AEGHFSLINEACSMFAHTNPLHLDIFQS 168 (541)
Q Consensus 100 ~~~lP~~g~~~~i~~~l~~~~~~~~~~~----------~~~~g~~y~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 168 (541)
++..|-.|.+...++.+++... +.+|. -+++..-|.+-.+ ...+.+.+.+++.++... ........+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~-~~~sr~~~g 143 (489)
T PLN02483 66 CFNRPIASAPDAWFDVVERVSN-DNNKTLKRTTKTRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSAS-TCSSRVDGG 143 (489)
T ss_pred ccCCCCCCCCCCeEEEEEeecC-CCCceEEecCCCceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCC-CCccccccC
Confidence 8999988776222233333211 11111 1344455555543 222456677777776332 222222233
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCC
Q 009181 169 VARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNI 248 (541)
Q Consensus 169 ~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~ 248 (541)
......++++.+++++|.+.. ++.++|+.++..++.++.. +| ++|+++++.|+++...++..|+
T Consensus 144 ~~~~~~ele~~lA~~~g~~~a--------i~~~~G~~an~~~i~al~~-----~G---d~Vi~d~~~h~s~~~~~~~~Ga 207 (489)
T PLN02483 144 TTKLHRELEELVARFVGKPAA--------IVFGMGYATNSTIIPALIG-----KG---GLIISDSLNHNSIVNGARGSGA 207 (489)
T ss_pred CcHHHHHHHHHHHHHhCCCcE--------EEECCHHHHHHHHHHHhCC-----CC---CEEEEcchhhHHHHHHHHHcCC
Confidence 445556677799999996542 3444567777777776543 67 9999999999999999999999
Q ss_pred eEEEeeCCCCCccCHHHHHHhhc-------cCc------eEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccc
Q 009181 249 KLWRVPVDKEFRADVKAIKKYIN-------RNT------VLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 249 ~v~~v~~~~~~~~d~~~Le~~i~-------~~t------~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~ 315 (541)
+++.++.+ |.+++++.++ ++| .+|++....+++|.+.++++|.++|++||+++++|++|+.+
T Consensus 208 ~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g 282 (489)
T PLN02483 208 TIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIG 282 (489)
T ss_pred eEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccC
Confidence 99999976 5666666553 222 35666666689999999999999999999999999999743
Q ss_pred hhhhhhhcCCC-CCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchH
Q 009181 316 VLPFAKKLGYP-IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLI 394 (541)
Q Consensus 316 ~~~f~~~~g~~-~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~ 394 (541)
.+ ...|.. ++.+.....++|++..+++|. +++.| |+++ .++++..........+. ..++.+....
T Consensus 283 ~~---G~~G~g~~~~~~v~~~~~dI~~~SfSKs-~g~~G-G~i~-~~~~li~~l~~~~~~~~--------~~~~~~p~~~ 348 (489)
T PLN02483 283 AV---GKTGRGVCELLGVDPADVDIMMGTFTKS-FGSCG-GYIA-GSKELIQYLKRTCPAHL--------YATSMSPPAV 348 (489)
T ss_pred cc---CCCCCchHHhcCCCcccCcEEEEecchh-cccCc-eEEE-cCHHHHHHHHHhCcccc--------ccCCcCHHHH
Confidence 32 111111 112233345789999999999 67765 7644 45554443221111110 0011111122
Q ss_pred HHHHHHHHHHh-H---HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-CCHHHHHHHHHhCCceecc
Q 009181 395 AGAWAALMSLG-Q---EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-VDIFEVNDIMSSKGWHLNP 469 (541)
Q Consensus 395 a~~~~al~~lg-~---~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~~~~~l~~~l~~~G~~~~~ 469 (541)
++..++++.+- . +...+..++..++++++++.|+++ |+++.++...+++++.... .+..++.+.|.++|+.+..
T Consensus 349 ~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~~GI~v~~ 427 (489)
T PLN02483 349 QQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVV 427 (489)
T ss_pred HHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCHHHHHHHHHHHHHCCcEEee
Confidence 23334454432 1 234566788999999999999998 8887766555666655432 3566889999999977654
Q ss_pred CCCC------CeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 470 LQRP------NSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 470 ~~~~------~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
.++| +.+|+|++..++ +|+++++++|+++++.+.
T Consensus 428 ~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 428 VGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 3332 579999998666 999999999999987654
No 51
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.95 E-value=2.1e-25 Score=220.11 Aligned_cols=384 Identities=16% Similarity=0.184 Sum_probs=278.6
Q ss_pred CCCCCCCCCCc-HHHHHHHHHHhCCCCCCC-C-CceeeeecCCCCcccHHHHHHHHHHhhcccCCCCc-ccchHHHHHHH
Q 009181 99 WWTELPRAGLG-VGVIEKLKEEKGKDVVWQ-G-KCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHL-DIFQSVARFEA 174 (541)
Q Consensus 99 ~~~~lP~~g~~-~~i~~~l~~~~~~~~~~~-~-~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~~~~~~~e~ 174 (541)
+....|....| .|+++++.++...+..-. + --.|..-+--++ -.+...-.+-.|.+..|+.+ +..++..++..
T Consensus 36 ~r~~~~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np---~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~ 112 (496)
T COG1003 36 FRRYPPLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNP---KAEMKPATWPEFANIHPFQPEEQVQGYLELIY 112 (496)
T ss_pred hhcCCCCccccHHHHHHHHHHHHhcccccccCccCCcccccccCc---hhhcccccccchhhcCCCCChHHHHHHHHHHH
Confidence 33444444567 999999999865444332 1 223333333333 23333334455566677766 44688999999
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++|++++.|++... +--..|+++-...+++.|.+...+..-.++.+++|+++|-.....|.+.|++|+.|+
T Consensus 113 ~Lq~~L~~ITG~Davs-------LQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~ 185 (496)
T COG1003 113 ELQEWLKEITGMDAVS-------LQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVK 185 (496)
T ss_pred HHHHHHHHhcCCceee-------ccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEe
Confidence 9999999999998642 344558888888888888877654333678999999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhhccCceEEEeecCCCCCcccc-CHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcC
Q 009181 255 VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIID-PIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS 333 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id-~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~ 333 (541)
++++|.+|+++|++++++++.++.+|+||+ +|.++ +|.+|+++.|++|..|..|+|- +..-.|. .+..
T Consensus 186 ~~~~G~VDlddLk~k~~~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGAN------lNA~vG~----~rPG 254 (496)
T COG1003 186 CDENGNVDLDDLRAKAEDNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGAN------LNAIVGL----ARPG 254 (496)
T ss_pred cCCCCCccHHHHHHHhccceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcc------hhhhhcc----cccc
Confidence 999999999999999999999999999998 99995 6999999999999999999995 3333443 4446
Q ss_pred CCCceEEEeCCCCCCCCCC-----CceEEEEecccccccccccccccCCCccC----CCcccC---CCC--CchHHHHHH
Q 009181 334 VQGVTSISVDVHKYGLAPK-----GTSVVLYRNREIRKHQFVAVTEWSGGLYV----SPTVAG---SRP--GGLIAGAWA 399 (541)
Q Consensus 334 ~~gvdsis~~~hK~~~~p~-----g~g~ll~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g---sr~--~~~~a~~~~ 399 (541)
..|.|++-++.||.+..|. |.|-+.++....--..... ....++.|. .+..-| .-. ..+....|+
T Consensus 255 d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~-~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~ 333 (496)
T COG1003 255 DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPV-VYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWA 333 (496)
T ss_pred ccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCc-ccCCCccccccCCCCccceeeccccCcchHHHHHHH
Confidence 7789999999999965554 4666666533111000000 000111110 010000 001 134568899
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC---eeEEEEecC------CCCHHHHHHHHHhCCceeccC
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD---MTIVAFGSD------VVDIFEVNDIMSSKGWHLNPL 470 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~f~~~------~~~~~~l~~~l~~~G~~~~~~ 470 (541)
-+..+|.+|+++..+...-+++|++++|+. .+++.-.+. ...+.+... +.+..+++++|.+.|++-++.
T Consensus 334 YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~ 411 (496)
T COG1003 334 YIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTM 411 (496)
T ss_pred HHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcc
Confidence 999999999999999999999999999986 455543333 344444433 457899999999999998877
Q ss_pred CCC----CeEEEEecCCCH-HHHHHHHHHHHHHHHHHHcCC
Q 009181 471 QRP----NSIHICVTLQHV-AVVDVFLRDLRESVETVKQNP 506 (541)
Q Consensus 471 ~~~----~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~~~ 506 (541)
-+| +.+-|=.|...+ +++|+|++++.++.++.++.|
T Consensus 412 ~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 412 YFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred cCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 666 677787777554 999999999999999999876
No 52
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=1e-25 Score=233.47 Aligned_cols=326 Identities=17% Similarity=0.190 Sum_probs=239.7
Q ss_pred HHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhc
Q 009181 145 FSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKR 222 (541)
Q Consensus 145 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~ 222 (541)
+..+.++....+.....+|....|..++.+.+.+++.+.+|.+ +++ ++ ++|+|+++|+..++.++.+ +
T Consensus 43 p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~---ei--ivt~Ga~~al~~~~~a~~~-----p 112 (393)
T COG0436 43 PEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEE---EI--IVTAGAKEALFLAFLALLN-----P 112 (393)
T ss_pred CHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---eE--EEeCCHHHHHHHHHHHhcC-----C
Confidence 3444444444443322156678899999999999999998854 332 36 9999999999999999986 8
Q ss_pred CCCCCeEEecCCccchHHHHHhhcCCeEEEeeCC---CCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHH
Q 009181 223 GITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD---KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELG 296 (541)
Q Consensus 223 Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~---~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~ 296 (541)
| |+|+++++.|+++.....++|.+++.++++ .+|.+|+++++++++++|++|++++||||||++.+ +++|+
T Consensus 113 G---DeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~ 189 (393)
T COG0436 113 G---DEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIV 189 (393)
T ss_pred C---CEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHH
Confidence 8 999999999999999999999999999975 37999999999999999999999999999999976 88999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCC-CCceEEEeCCCCCCCCCCC--ceEEEEeccccccccccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSV-QGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVT 373 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~-~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~ 373 (541)
++|++|++|++.|++|.++.. +..-+ .+...... ....+..-++.|. ++..| +||++..++++.........
T Consensus 190 ~~a~~~~i~ii~DEiY~~l~y---d~~~~-~s~~~~~~~~~~~i~i~s~SK~-~~mtGwRvG~~v~~~~~l~~~~~~~~~ 264 (393)
T COG0436 190 ELAREHDIIIISDEIYEELVY---DGAEH-PSILELAGARDRTITINSFSKT-YGMTGWRIGWVVGPPEELIAALRKLKS 264 (393)
T ss_pred HHHHHcCeEEEEehhhhhccc---CCCCc-CCHhhcCCCcceEEEEeccccc-ccccccceeEeecChHHHHHHHHHHHH
Confidence 999999999999999988765 11100 11111111 1123444477898 56665 89977765544432211110
Q ss_pred ccCCCccCCCcccCCCCCchHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEE-ec
Q 009181 374 EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ----EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAF-GS 448 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~----~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f-~~ 448 (541)
. .-.+.....|.++...+.. ...+...+...++++.+.+.|.+++|+.+..+|+..+..| ..
T Consensus 265 ~-------------~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i 331 (393)
T COG0436 265 Y-------------LTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKI 331 (393)
T ss_pred h-------------cccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeec
Confidence 0 1111224477777777742 3667777889999999999999998999998676555444 45
Q ss_pred CC-CCHHHHHHHHHhCC-ceec---cCCCC---CeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 449 DV-VDIFEVNDIMSSKG-WHLN---PLQRP---NSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 449 ~~-~~~~~l~~~l~~~G-~~~~---~~~~~---~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
+. .+..+++..|.++. +.+. .++.+ +++|+|+.... +++++.++++++.++..
T Consensus 332 ~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~-~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 332 PELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSE-ETLEEALRRLARFLAEY 392 (393)
T ss_pred CCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCH-HHHHHHHHHHHHHHHhc
Confidence 44 48889998887764 4432 24433 78999999755 89999999999887653
No 53
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.95 E-value=1e-25 Score=232.39 Aligned_cols=329 Identities=16% Similarity=0.160 Sum_probs=232.4
Q ss_pred cCCCCcccHHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHH
Q 009181 136 IGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSR 215 (541)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r 215 (541)
|++.. ..+.+.+++....+ ++ .+...++..++++.+++++|.++.. ..-++++|||+++..++.++.
T Consensus 5 p~p~~---~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~la~~~~~~~~~----~~i~~~~~gt~~l~~~~~~~~ 71 (355)
T TIGR03301 5 PGPLS---TSATVRDAMLVDWC----HW--DSEFNDVTDQVRDRLLALAGGDDNH----TCVLLQGSGTFAVEATIGSLV 71 (355)
T ss_pred CCCCC---CCHHHHHHhhhhcc----CC--CHHHHHHHHHHHHHHHHHhcCCCCC----cEEEEeCCcHHHHHHHHHhcc
Confidence 44444 45556666554222 22 1233466667999999999998652 122689999999999998875
Q ss_pred HHHHhhcCCCCCeEEec-CCccch-HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccC--ceEEEeecCCCCCccccC
Q 009181 216 DYMRNKRGITRPEMIIP-VSAHSA-YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRN--TVLIVGSAPGFPHGIIDP 291 (541)
Q Consensus 216 ~~~~~~~Gi~~~~vi~~-~~~h~s-~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~--t~~vv~~~~~~~~G~id~ 291 (541)
. +| +++++. ...|.+ +..+++..|++++.++.++++.+|+++++++++++ +++++.++++|++|.+.|
T Consensus 72 ~-----~~---~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~ 143 (355)
T TIGR03301 72 P-----RD---GKLLVLINGAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNP 143 (355)
T ss_pred C-----CC---CeEEEECCCchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH
Confidence 3 33 565554 444444 56788899999999999878889999999999754 567888999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEeccccccccccc
Q 009181 292 IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVA 371 (541)
Q Consensus 292 i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~ 371 (541)
+++|+++|++||+++++|++++.+.. ++++...++|++..++|||+++|.|+|+++.+++. .......
T Consensus 144 ~~~i~~l~~~~~~~livD~~~s~g~~-----------~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~-~~~~~~~ 211 (355)
T TIGR03301 144 LEAIAKVARSHGAVLIVDAMSSFGAI-----------PIDIEELDVDALIASANKCLEGVPGFGFVIARRDL-LEASAGN 211 (355)
T ss_pred HHHHHHHHHHcCCEEEEEeccccCCc-----------ccchhhcCccEEEecCCcccccCCceeEEEECHHH-HHHhhCC
Confidence 99999999999999999998643222 35556668999999999998899999987776543 2221100
Q ss_pred ccccCCCc-------cCCCcccCCCCCchHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC---
Q 009181 372 VTEWSGGL-------YVSPTVAGSRPGGLIAGAWAALMSLGQEG-YLENTKAIMEVSESIQKGIKEIPELFIIGRPD--- 440 (541)
Q Consensus 372 ~~~~~~~~-------~~~~~~~gsr~~~~~a~~~~al~~lg~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~--- 440 (541)
...+.... .......++.+...++++..+++.+..+| +.+..++..++++++++.|+++ +++++.++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~ 290 (355)
T TIGR03301 212 ARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQS 290 (355)
T ss_pred CCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCC
Confidence 00000000 00000112223334556677887776666 8889999999999999999987 888765533
Q ss_pred eeEEEEecCC---CCHHHHHHHHHhCCceeccCCC--CCeEEEEecCCCH-HHHHHHHHHHHHH
Q 009181 441 MTIVAFGSDV---VDIFEVNDIMSSKGWHLNPLQR--PNSIHICVTLQHV-AVVDVFLRDLRES 498 (541)
Q Consensus 441 ~~~v~f~~~~---~~~~~l~~~l~~~G~~~~~~~~--~~~iRi~~~~~~~-e~id~~i~~L~~~ 498 (541)
..++++..+. .+..++.++|.++|+.+..... .+++|+++...++ +|++++++.|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 291 PIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred CcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 3356777654 3557899999999987754321 2689999866555 9999999999875
No 54
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=6.8e-25 Score=227.51 Aligned_cols=295 Identities=15% Similarity=0.126 Sum_probs=212.6
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEe
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v 253 (541)
.++++.+++++|.++. .+++|+++++..++.++.. +| ++|+++...|++...+++..|++++.+
T Consensus 54 ~~~~e~lA~~~g~~~~--------~i~~g~~~a~~~~~~~l~~-----~g---d~Vl~~~~~h~s~~~~~~~~g~~~~~~ 117 (370)
T TIGR02539 54 HDFLEDLAEFLGMDEA--------RVTHGAREGKFAVMHALCK-----EG---DWVVLDGLAHYTSYVAAERAGLNVKEV 117 (370)
T ss_pred HHHHHHHHHHhCCCce--------EEECChHHHHHHHHHHhhC-----CC---CEEEECCcccHHHHHHHHHcCCEEEEE
Confidence 3456679999999753 5789999999999888753 56 899999999999888899999999999
Q ss_pred eCCC--CCccCHHHHHHhhcc-------CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcC
Q 009181 254 PVDK--EFRADVKAIKKYINR-------NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLG 324 (541)
Q Consensus 254 ~~~~--~~~~d~~~Le~~i~~-------~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g 324 (541)
|.++ ++.+|+++|++++++ ++.+|++++|+|++|.+.|+++|+++|++||+++++|++|+.+.++
T Consensus 118 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~------ 191 (370)
T TIGR02539 118 PHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMP------ 191 (370)
T ss_pred ecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcC------
Confidence 9863 688999999999963 6889999999999999999999999999999999999999754332
Q ss_pred CCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHH
Q 009181 325 YPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL 404 (541)
Q Consensus 325 ~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l 404 (541)
.+....++|+++.++||++.++.++|+++.+ +++..........|...... ...++......+++++++...
T Consensus 192 -----~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~-~~~i~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~al~~~ 263 (370)
T TIGR02539 192 -----VSAKEIGADFIVGSGHKSMAASGPCGVLGMS-EEWEDIVLRKSRYSPVKEVE--LLGCTSRGAPIVTMMASFPHV 263 (370)
T ss_pred -----CCHHHcCCCEEEeeCcccccCCCCEEEEEEC-HHHHhhhcccccCCccceee--eecccccccHHHHHHHHHHHH
Confidence 2223346899999999996655667876654 44444332222333222110 111222222344555555322
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEec--CCCeeEEEEecCCC---------CHHHHHHHHHhCCceeccCCCC
Q 009181 405 GQEGYLENTKAIMEVSESIQKGIKEIPELFIIG--RPDMTIVAFGSDVV---------DIFEVNDIMSSKGWHLNPLQRP 473 (541)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~f~~~~~---------~~~~l~~~l~~~G~~~~~~~~~ 473 (541)
.+.+ +..++..++++++++.|+++ |+++++ ++..+++.+..+.. +...+.+.|.++|+.....+.+
T Consensus 264 -~~~l-~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~~~ 340 (370)
T TIGR02539 264 -VERV-KRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSGQT 340 (370)
T ss_pred -HHHH-HHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCCcc
Confidence 2223 33344455578999999998 788753 55677887875432 2346899999999862223445
Q ss_pred CeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 474 NSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 474 ~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
+.+|+++...+.++++++++.|++++++
T Consensus 341 ~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 341 KYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred eEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 6899997544559999999999998765
No 55
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.95 E-value=3.9e-25 Score=248.78 Aligned_cols=357 Identities=13% Similarity=0.116 Sum_probs=256.0
Q ss_pred CCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCceeeeecCCCCcccHHHHHH--HHHHhhcccCCCCcccchHHHHHHHH
Q 009181 99 WWTELPRAGLG-VGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLIN--EACSMFAHTNPLHLDIFQSVARFEAE 175 (541)
Q Consensus 99 ~~~~lP~~g~~-~~i~~~l~~~~~~~~~~~~~~~g~~y~~~~~~~~~~~~~~--~~~~~~~~~n~~~~~~~~~~~~~e~e 175 (541)
.+..||+ +.+ .|+++++.++...+..+..+...+.|+...++.....++. +++ ...+|++++.++|..+...+
T Consensus 50 ~~l~lp~-~~sE~e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~~~~---t~ytPyQ~EisQG~Leal~~ 125 (954)
T PRK05367 50 EPLDLPA-ALSEAEALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPAWY---TAYTPYQPEISQGRLEALLN 125 (954)
T ss_pred CCCCCCC-CCCHHHHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCcchh---hccCCCChHHHHHHHHHHHH
Confidence 3566775 568 9999999999666655656666666666554111111222 333 34589999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH----HhhcCCeEE
Q 009181 176 VIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA----AQYFNIKLW 251 (541)
Q Consensus 176 v~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka----~~~~G~~v~ 251 (541)
+++++++++|++..+ + .++.++|.+...++++.+- . ++++ ++|++++..|++.... ++..|++++
T Consensus 126 ~Qt~la~LtG~~~an----a--Sl~d~aTAa~ea~~~a~~~-~-~~~~---~~vlv~~~~hP~~~~v~~t~a~~~G~ev~ 194 (954)
T PRK05367 126 FQTMVADLTGLEIAN----A--SLLDEATAAAEAMALAKRV-S-KSKS---NRFFVDDDVHPQTLDVLRTRAEPLGIEVV 194 (954)
T ss_pred HHHHHHHHHCCChhh----c--cccccHHHHHHHHHHhhhh-c-cCCC---CEEEEcCccCHHHHHHHHHHHHhCCCEEE
Confidence 999999999999886 5 8999999998877766642 1 1123 7899999999996644 567799999
Q ss_pred EeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 252 RVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
.++.+++. + ++++..+++..|+ .+|.+.|+++|+++||++|++++||+.+.+..++ .+
T Consensus 195 ~~~~~~d~--~--------~~~~~~vlvq~p~-~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l-----------~~ 252 (954)
T PRK05367 195 VGDAAKAL--D--------HDDVFGVLLQYPG-TSGEVRDYTALIAAAHARGALVAVAADLLALTLL-----------TP 252 (954)
T ss_pred EecCccCC--C--------cccEEEEEEecCC-CCeeeccHHHHHHHHHHcCCEEEEEehhhhccCC-----------CC
Confidence 99986421 1 3467777777775 5999999999999999999999999965222221 23
Q ss_pred cCCCCceEEEeCCCCCC----CCCCCceEEEEeccccccccccccccc----CCCc-cC----CCcccCCCCCc-----h
Q 009181 332 FSVQGVTSISVDVHKYG----LAPKGTSVVLYRNREIRKHQFVAVTEW----SGGL-YV----SPTVAGSRPGG-----L 393 (541)
Q Consensus 332 ~~~~gvdsis~~~hK~~----~~p~g~g~ll~~~~~~~~~~~~~~~~~----~~~~-~~----~~~~~gsr~~~-----~ 393 (541)
....|+|++.+++|||| +|+++.|++.++++..+... .....| .+.. +. +...+-+|-.+ .
T Consensus 253 pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lp-grivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict 331 (954)
T PRK05367 253 PGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMP-GRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICT 331 (954)
T ss_pred hhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCC-CCeeeeecccCCCcccccccccccccccccccccccch
Confidence 46789999999999993 44445999888865333221 111122 2211 10 01111122111 0
Q ss_pred ---HHHHHH--HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceec
Q 009181 394 ---IAGAWA--ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLN 468 (541)
Q Consensus 394 ---~a~~~~--al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~ 468 (541)
+.+..+ .+.++|.+|++++.+++..+++++++.|++ +|+++..++.+..+.++.. .+..++.++|.++|+++.
T Consensus 332 ~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~~~f~~~~~~~~-~~~~~i~~~l~~~gi~~~ 409 (954)
T PRK05367 332 AQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVHDSFFDTLTVEVG-GDAAAVLARALAAGINLR 409 (954)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCCCCeEEEeCC-CCHHHHHHHHHHCCceec
Confidence 111222 235689999999999999999999999987 5999888777888888864 478899999999999885
Q ss_pred cCCCCCeEEEEecCCCH-HHHHHHHHHHH
Q 009181 469 PLQRPNSIHICVTLQHV-AVVDVFLRDLR 496 (541)
Q Consensus 469 ~~~~~~~iRi~~~~~~~-e~id~~i~~L~ 496 (541)
... ++.+|+|++..++ +|+|++++.|.
T Consensus 410 ~~~-~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 410 RVD-DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred ccc-CCEEEEEecccCCHHHHHHHHHHHc
Confidence 443 4689999999988 99999999997
No 56
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.95 E-value=6.7e-25 Score=227.65 Aligned_cols=309 Identities=18% Similarity=0.209 Sum_probs=227.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH--HHHHhhc
Q 009181 169 VARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY--DKAAQYF 246 (541)
Q Consensus 169 ~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~--~ka~~~~ 246 (541)
..+...++++.+++++|.+++. ..+ ++|++||+++..++.++.. +| ++++++...++.. ...++..
T Consensus 35 ~~~~~~~~~~~l~~l~~~~~~~--~~i--~~~~~gt~~l~~~~~~l~~-----~~---~~vlv~~~~~~~~~~~~~~~~~ 102 (368)
T PRK13479 35 FNALTASVRAKLVAIATGEEGY--TCV--PLQGSGTFSVEAAIGSLVP-----RD---GKVLVPDNGAYGARIAQIAEYL 102 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCCCc--eEE--EEcCCcHHHHHHHHHhccC-----CC---CeEEEEeCCchHHHHHHHHHHc
Confidence 4456677999999999997532 013 7899999999999998753 44 6788877766654 4788899
Q ss_pred CCeEEEeeCCCCCccCHHHHHHhhccC--ceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcC
Q 009181 247 NIKLWRVPVDKEFRADVKAIKKYINRN--TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLG 324 (541)
Q Consensus 247 G~~v~~v~~~~~~~~d~~~Le~~i~~~--t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g 324 (541)
|++++.||.++++.+|+++++++++++ +.+|++++++|++|.+.|+++|.++|+++|++++||++++....
T Consensus 103 g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~------- 175 (368)
T PRK13479 103 GIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAI------- 175 (368)
T ss_pred CCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCc-------
Confidence 999999999877889999999999754 56889999999999999999999999999999999987532211
Q ss_pred CCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCcc------C-CCcccCCCCCchHHHH
Q 009181 325 YPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLY------V-SPTVAGSRPGGLIAGA 397 (541)
Q Consensus 325 ~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~gsr~~~~~a~~ 397 (541)
+++....++|++.+++|||+++|.|+|+++++.+. ..........|..... . ......+.+...++++
T Consensus 176 ----~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l 250 (368)
T PRK13479 176 ----PIDIAELGIDALISSANKCIEGVPGFGFVIARRSE-LEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAF 250 (368)
T ss_pred ----cccccccCceEEEecCccccccCCCceEEEECHHH-HHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHH
Confidence 35566678999999999998999999987776543 2221111111110000 0 0000012233446678
Q ss_pred HHHHHHHhHH-HHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC---eeEEEEecCC---CCHHHHHHHHHhCCceeccC
Q 009181 398 WAALMSLGQE-GYLENTKAIMEVSESIQKGIKEIPELFIIGRPD---MTIVAFGSDV---VDIFEVNDIMSSKGWHLNPL 470 (541)
Q Consensus 398 ~~al~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~f~~~~---~~~~~l~~~l~~~G~~~~~~ 470 (541)
.+++..+..+ ++++..+++.++++++.+.|+++ |++++.++. ..+++|..+. .+..++.+.|.++|+.+...
T Consensus 251 ~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g 329 (368)
T PRK13479 251 YQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPG 329 (368)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecC
Confidence 8888877555 47888899999999999999998 888765432 2356666543 36678999999999887543
Q ss_pred CC--CCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 471 QR--PNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 471 ~~--~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
.. .+.+|++...+++ +|++++++.|+++++++
T Consensus 330 ~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 330 KLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 22 3589998644455 99999999999998764
No 57
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.94 E-value=7.3e-25 Score=223.72 Aligned_cols=382 Identities=19% Similarity=0.220 Sum_probs=218.3
Q ss_pred HHHHHHhhhhcccC-CCcccc-ccCCCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCceeeeecCCCCcccHHHHHHH-H
Q 009181 76 YIEAEKQKVVDKMQ-SGVKSK-REGWWTELPRAGLG-VGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLINE-A 151 (541)
Q Consensus 76 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~lP~~g~~-~~i~~~l~~~~~~~~~~~~~~~g~~y~~~~~~~~~~~~~~~-~ 151 (541)
+++...-+.++++. ..++.+ +......||+. .| .|+++++.++...+....+++.++.|....+ ..+.+ .
T Consensus 14 ML~~iG~~sieeL~~~~IP~~i~~~~~~~lp~~-~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~~~P-----~~i~~~i 87 (429)
T PF02347_consen 14 MLDAIGVKSIEELFDSDIPEEIRLKKPLNLPEP-LSEYELLRHLERLASKNKSYTSFIGAGSYTHYVP-----AVIDRNI 87 (429)
T ss_dssp HHHHCT-SSTGGGG-TTS-GGG-SS-----------HHHHHHHHHHHHTTS--TTS---CTTT----------HHHHH-H
T ss_pred HHHhcCCCCHHHHhhhhCCHhhcCCCCCCCCCC-CCHHHHHHHHHHHHhcCCCCCccccccccCceeC-----hhhcCcc
Confidence 33333344556666 333322 23345777765 78 9999999999776665446665555555443 34444 2
Q ss_pred H--Hhh-cccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 009181 152 C--SMF-AHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPE 228 (541)
Q Consensus 152 ~--~~~-~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~ 228 (541)
+ ..| ...+|++++.++|..++..|.++|+++++|++..+ . .+..|+|.+-..++++.|...++ +.+
T Consensus 88 ~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaN----a--Slyd~atA~aEa~~ma~r~~~~~-----~~~ 156 (429)
T PF02347_consen 88 LSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVAN----A--SLYDGATAAAEAMLMAVRATKRK-----RNK 156 (429)
T ss_dssp HCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-----S--EBSSCCHHHHHHHHHHHHHHTT--------E
T ss_pred ccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccC----C--CCCChhHHHHHHHHHHHHhcccC-----CcE
Confidence 2 222 34578999999999999999999999999999776 3 68888887777776666643222 268
Q ss_pred EEecCCccchHHHHHh----hcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCC
Q 009181 229 MIIPVSAHSAYDKAAQ----YFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGT 304 (541)
Q Consensus 229 vi~~~~~h~s~~ka~~----~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i 304 (541)
|+++...|+.....++ ..|++++.+|.++++..| ++++.+|++++||+ .|.++++++|++++|++|.
T Consensus 157 vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~ga 227 (429)
T PF02347_consen 157 VLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGA 227 (429)
T ss_dssp EEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-
T ss_pred EEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCC
Confidence 9999999999877544 458999999998877777 78899999999997 9999999999999999999
Q ss_pred EEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCC----CCCCCCceEEEEeccccccccccc---ccccCC
Q 009181 305 CLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKY----GLAPKGTSVVLYRNREIRKHQFVA---VTEWSG 377 (541)
Q Consensus 305 ~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~----~~~p~g~g~ll~~~~~~~~~~~~~---~~~~~~ 377 (541)
.+++ ++- | -.++.-.+ ....|+|++..+.+-+ ++|+++.|++.++++-.++..-+. ..+-.|
T Consensus 228 l~~~-~ad-----~--~aL~~l~~---Pge~GADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G 296 (429)
T PF02347_consen 228 LVIV-GAD-----P--NALGGLKS---PGEYGADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADG 296 (429)
T ss_dssp EEEE-CGG-----C--CGCCTC-----GGGGT-SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCC
T ss_pred EEEE-ecC-----H--HHHhCcCC---hhhcCccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccc
Confidence 9987 552 1 11221112 2456889997774433 267777899888887444332111 111111
Q ss_pred Cc-c----CCCcccCCCCC---------ch-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCee
Q 009181 378 GL-Y----VSPTVAGSRPG---------GL-IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMT 442 (541)
Q Consensus 378 ~~-~----~~~~~~gsr~~---------~~-~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~ 442 (541)
.. + .+..++-+|-. ++ ....++-+..+|.+|++++.+++..+++|+++.|+++.++.+.+++..-
T Consensus 297 ~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e 376 (429)
T PF02347_consen 297 KRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFE 376 (429)
T ss_dssp SCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSS
T ss_pred cceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCcee
Confidence 10 0 01111111211 11 1233444455999999999999999999999999997455444444444
Q ss_pred EEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHH
Q 009181 443 IVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDL 495 (541)
Q Consensus 443 ~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L 495 (541)
.|.....+....++.++....|..+.... .+.+-+|+|..++ +|+|++++.|
T Consensus 377 ~v~~~~~~~~~~~l~~~~~~~gl~~~~~~-~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 377 FVVVFSKDKEVEELLKRGIEGGLNLRYPD-DGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp EEEEESS-HHHHHHHHTT----EEEGGG--SSEEEEE--TT--HHHHHHHHH--
T ss_pred eeeecCCcHHHHHHHHHHHhcCCCccccC-CCeEEEEccCCCCHHHHHHHHhcC
Confidence 55444443223334444444553333222 3589999999888 9999999864
No 58
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.94 E-value=2.1e-24 Score=241.62 Aligned_cols=359 Identities=14% Similarity=0.126 Sum_probs=251.8
Q ss_pred CCCCCC--CCCc-HHHHHHHHHHhCCCCCCCCCceeeeecCCCCcccHHHHHHHHHHhhcccCCCCcccchHHHHHHHHH
Q 009181 100 WTELPR--AGLG-VGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEV 176 (541)
Q Consensus 100 ~~~lP~--~g~~-~~i~~~l~~~~~~~~~~~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev 176 (541)
.+.||+ ++.+ .|+++++.++...+..+..+...+.|+...++ ...+.+.+...-+...+|++++.+++..+...++
T Consensus 75 ~l~lp~~~~~~sE~e~~~~~~~la~kN~~~~~fiG~G~y~~~~P~-~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~ 153 (993)
T PLN02414 75 SMKLSKYDEGLTESQMLEHMKSLASKNKVFKSYIGMGYYNTHVPP-VILRNILENPGWYTQYTPYQAEIAQGRLESLLNY 153 (993)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCccccccCCCCCCccCCH-HHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHH
Confidence 566772 5778 99999999996655444344444455554431 1212333333334455899999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHH----hhcCCeEEE
Q 009181 177 IAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA----QYFNIKLWR 252 (541)
Q Consensus 177 ~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~----~~~G~~v~~ 252 (541)
++++++++|++.++ + .++.++|.+...++++.+- . +| ++++|++++..|++....+ +..|++++.
T Consensus 154 Qt~ia~LtG~~~an----a--SL~d~aTAaaea~~~a~~~--~--~g-~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~ 222 (993)
T PLN02414 154 QTMITDLTGLPMSN----A--SLLDEGTAAAEAMAMCNNI--L--KG-KKKKFLIASNCHPQTIDVCQTRADGLGLEVVV 222 (993)
T ss_pred HHHHHHHhCCChhh----E--eecCChHHHHHHHHHHHhc--c--cC-CCCEEEEcCccCHhHHHHHHHhhhhcCCEEEE
Confidence 99999999999887 5 8999999999988777642 1 22 1378999999999965544 556999999
Q ss_pred eeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCc
Q 009181 253 VPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (541)
Q Consensus 253 v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~ 332 (541)
+|.++. + ...+.+..+++..|++ +|.+.|+++|+++||++|++++| +|..-...+ + -+.
T Consensus 223 v~~~~~---~------~~~~~v~~vlvq~P~~-~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~--------l--~~p 281 (993)
T PLN02414 223 ADEKDF---D------YSSGDVCGVLVQYPAT-DGEVLDYAEFVKNAHANGVKVVM-ATDLLALTM--------L--KPP 281 (993)
T ss_pred ecchhh---c------cccCceEEEEEecCCC-CeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcC--------C--CCH
Confidence 987531 1 1233566666666654 99999999999999999999999 665322211 1 135
Q ss_pred CCCCceEEEeCCCCCCCCCCC-----ceEEEEecccccccccccccccCCCccCC---------Ccc-----cCCCCCch
Q 009181 333 SVQGVTSISVDVHKYGLAPKG-----TSVVLYRNREIRKHQFVAVTEWSGGLYVS---------PTV-----AGSRPGGL 393 (541)
Q Consensus 333 ~~~gvdsis~~~hK~~~~p~g-----~g~ll~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-----~gsr~~~~ 393 (541)
...|+|++++++|||| +|.| .|++.++++..+... .....|.....+. ... .|+..-..
T Consensus 282 ge~GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~~r~~P-griVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict 359 (993)
T PLN02414 282 GEWGADIVVGSAQRFG-VPMGYGGPHAAFLATSQEYKRLMP-GRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICT 359 (993)
T ss_pred hhccCcEEEECCCccc-cCCCCCCCCeeEEEECHHHHhhCC-CcccCcccCCCCCcccccccccccchhhhcccccchhH
Confidence 6779999999999997 4444 798888765433211 0122231110000 111 11111111
Q ss_pred HHHHHHHH-----HHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceec
Q 009181 394 IAGAWAAL-----MSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLN 468 (541)
Q Consensus 394 ~a~~~~al-----~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~ 468 (541)
..++++++ .++|..|++++.+++..++.++++.|++. |+++..++.+..|+|+.+ +..++.++|.++|+.+.
T Consensus 360 ~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~~~f~~vt~~~~--~~~~v~~~L~~~gI~l~ 436 (993)
T PLN02414 360 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GFQVQSLPFFDTVKVKCS--DADAIADAAAKVGINLR 436 (993)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CCccCCCCCcCeEEEecC--CHHHHHHHHHHCCCeeE
Confidence 12333333 35688999999999999999999999885 899988888889999875 45889999999999877
Q ss_pred cCCCCCeEEEEecCCCH-HHHHHHHHHHHH
Q 009181 469 PLQRPNSIHICVTLQHV-AVVDVFLRDLRE 497 (541)
Q Consensus 469 ~~~~~~~iRi~~~~~~~-e~id~~i~~L~~ 497 (541)
... .+.+|+|++..++ +|||++++.|..
T Consensus 437 ~~~-~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 437 VVD-ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred Eec-CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 554 3579999999988 999999999974
No 59
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=1e-24 Score=231.61 Aligned_cols=305 Identities=11% Similarity=0.114 Sum_probs=222.1
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEc---CcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMT---SGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t---~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka 242 (541)
.....++|..+++.++++||+++++ + +++ ++|++|+..++.++.+ +| ++|+++...|.+....
T Consensus 75 ~~~~~~iE~~ar~~~a~lf~a~~~~----~--~~~~~~~sgt~an~~v~~al~~-----~g---d~Ii~~~~ehg~~l~~ 140 (452)
T PTZ00094 75 NEVVDKIENLCQKRALEAFGLDPEE----W--GVNVQPYSGSPANFAVYTALLQ-----PH---DRIMGLDLPSGGHLTH 140 (452)
T ss_pred chHHHHHHHHHHHHHHHHhCCCccc----c--eeecCCCchHHHHHHHHHHhcC-----CC---CEEEecccccCCcccc
Confidence 3456778877899999999998664 3 455 8999999999998842 56 8999999999886543
Q ss_pred Hhh----------cCCeEEEeeCCCCCccCHHHHHHhhcc-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCC
Q 009181 243 AQY----------FNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 243 ~~~----------~G~~v~~v~~~~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a 311 (541)
+.. .++++..+++++++.+|+++|++++++ ++.+++++ ++.+|.+.|+++|+++|+++|+++|||++
T Consensus 141 ~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaa 218 (452)
T PTZ00094 141 GFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIA 218 (452)
T ss_pred cccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEecc
Confidence 321 123455666777899999999999964 66666654 34599999999999999999999999999
Q ss_pred cccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCC
Q 009181 312 LGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG 391 (541)
Q Consensus 312 ~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~ 391 (541)
++.+.++. + . +.....++|++++++|||++||.| |+++++++ ...... .+... ...+...|+..-
T Consensus 219 q~~G~i~~----~--~--~~~~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~-~~~~l~----~~~~~-~~~p~~~G~~~~ 283 (452)
T PTZ00094 219 HTSGLVAA----G--V--LPSPFPYADVVTTTTHKSLRGPRS-GLIFYRKK-VKPDIE----NKINE-AVFPGLQGGPHN 283 (452)
T ss_pred chhccccC----C--C--CCCCCCCCcEEEcCCccCCCCCCc-eEEEEecc-cchHHH----Hhhcc-ccCCCCCCCchH
Confidence 98776641 1 0 011124899999999999889997 76777653 221100 00000 011122344334
Q ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC---CeeEEEEecCCCCHHHHHHHHHhCCceec
Q 009181 392 GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP---DMTIVAFGSDVVDIFEVNDIMSSKGWHLN 468 (541)
Q Consensus 392 ~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~---~~~~v~f~~~~~~~~~l~~~l~~~G~~~~ 468 (541)
..++++.++++.+...++++..+++.+++++|.+.|++. |+++..+. ...++.|...+.+..++...|.++|+.++
T Consensus 284 ~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs 362 (452)
T PTZ00094 284 HQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVN 362 (452)
T ss_pred HHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEe
Confidence 457788889988877788899999999999999999886 88887532 23445555555678889999988898775
Q ss_pred cC--------CCCCeEEEEecCCCH-----HHHHHHHHHHHHHHHHH
Q 009181 469 PL--------QRPNSIHICVTLQHV-----AVVDVFLRDLRESVETV 502 (541)
Q Consensus 469 ~~--------~~~~~iRi~~~~~~~-----e~id~~i~~L~~~~~~l 502 (541)
.. ..++.+|++++.+++ +|++++++.|+++++..
T Consensus 363 ~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~ 409 (452)
T PTZ00094 363 KNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLA 409 (452)
T ss_pred cccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 32 124689999977764 89999999999998763
No 60
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.94 E-value=6.2e-24 Score=221.52 Aligned_cols=321 Identities=14% Similarity=0.175 Sum_probs=227.8
Q ss_pred HHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhC--CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC
Q 009181 147 LINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLG--NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI 224 (541)
Q Consensus 147 ~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g--~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi 224 (541)
.+.+++...+.....+|...++..++.+.+.+++.+.+| .++++ + ++|+|+++++..++.++.+ +|
T Consensus 41 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~----i--~~t~g~~~al~~~~~~l~~-----~g- 108 (382)
T PRK06108 41 FIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPER----I--AVTSSGVQALMLAAQALVG-----PG- 108 (382)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcce----E--EEeCChHHHHHHHHHHhcC-----CC-
Confidence 344444444433334465567778889989999998888 55554 6 8999999999999988753 56
Q ss_pred CCCeEEecCCccchHHHHHhhcCCeEEEeeCCC---CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHH
Q 009181 225 TRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK---EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGEL 298 (541)
Q Consensus 225 ~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~---~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~l 298 (541)
++|+++.+.|+.+...++.+|++++.+|.+. ++.+|+++++++++++++++++++|+||||.+.+ +++|.++
T Consensus 109 --d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~ 186 (382)
T PRK06108 109 --DEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAH 186 (382)
T ss_pred --CEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHH
Confidence 8999999999999999999999999999963 4679999999999889999999999999998865 6789999
Q ss_pred HHHcCCEEEEeCCcccchhhhhhhcCCCCCC-CCcCC-CCceEEEeCCCCCC-CCCCCceEEEEeccccccccccccccc
Q 009181 299 ALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP-FDFSV-QGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEW 375 (541)
Q Consensus 299 a~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~-~~~~~-~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~ 375 (541)
|+++|+++++|++|+.+... . +...+. .++.. ..-.++..+++|.. .++.++|+++.+. ++....... ..+
T Consensus 187 ~~~~~~~li~De~y~~~~~~--~--~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~-~~~~~~~~~-~~~ 260 (382)
T PRK06108 187 CRRHGLWIVADEVYERLYYA--P--GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP-ALGQVLEKL-IEY 260 (382)
T ss_pred HHHCCcEEEEehhhhhhccC--C--CCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH-HHHHHHHHH-HHh
Confidence 99999999999999877542 0 000111 12211 12357778999973 3455689877643 333221100 011
Q ss_pred CCCccCCCcccCCCCCchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-C
Q 009181 376 SGGLYVSPTVAGSRPGGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV-D 452 (541)
Q Consensus 376 ~~~~~~~~~~~gsr~~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~-~ 452 (541)
.. .+.....+.++...+ +.+.+++..+++.++++++.+.|++++++++..+....++++.+++. +
T Consensus 261 ~~------------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~~ 328 (382)
T PRK06108 261 NT------------SCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVTD 328 (382)
T ss_pred cc------------cCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCCC
Confidence 00 001122333343333 34567888889999999999999988888877554455566776543 6
Q ss_pred HHHHHHHHH-hCCceecc---CC--CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 453 IFEVNDIMS-SKGWHLNP---LQ--RPNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 453 ~~~l~~~l~-~~G~~~~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
..++.+.|. ++|+.+.. ++ .++++|+|++. +.+++++++++|+++++
T Consensus 329 ~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 329 SLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLA 381 (382)
T ss_pred HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 778888875 57876633 11 24789999997 66999999999988763
No 61
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.94 E-value=2.5e-24 Score=242.64 Aligned_cols=309 Identities=15% Similarity=0.093 Sum_probs=227.0
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHH---H
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK---A 242 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~k---a 242 (541)
+..+.++..++++.+++++|+++.+. +| +||+|+|+|+.++..++. -++| ++|+++...|+++.. .
T Consensus 73 s~~~~~~~e~aR~~ia~~lga~~~~~--~V--vFtsnaT~alnlva~~l~----~~~g---d~Iv~t~~eH~svl~~~~~ 141 (805)
T PLN02724 73 SMRSSDTIESARQQVLEYFNAPPSDY--AC--VFTSGATAALKLVGETFP----WSSE---SHFCYTLENHNSVLGIREY 141 (805)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCccce--EE--EEeCChHHHHHHHHHHCC----CCCC---CeEEEeeccccchHHHHHH
Confidence 34456667779999999999975420 14 899999999999877653 1245 899999999988543 3
Q ss_pred HhhcCCeEEEeeCC--------CCCccCH--HHHHHhhc----------cCceEEEeecCCCCCccccCHHHHHHHHHHc
Q 009181 243 AQYFNIKLWRVPVD--------KEFRADV--KAIKKYIN----------RNTVLIVGSAPGFPHGIIDPIQELGELALSH 302 (541)
Q Consensus 243 ~~~~G~~v~~v~~~--------~~~~~d~--~~Le~~i~----------~~t~~vv~~~~~~~~G~id~i~~I~~la~~~ 302 (541)
++..|++++.++++ +.+.++. ++|++.++ ++|++|++++.+|.+|.+.|+++|.++++..
T Consensus 142 a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~ 221 (805)
T PLN02724 142 ALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQ 221 (805)
T ss_pred HHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhc
Confidence 44569999999986 3444544 66777642 4578999999999999999999876655532
Q ss_pred --------CCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccc
Q 009181 303 --------GTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTE 374 (541)
Q Consensus 303 --------~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~ 374 (541)
+++++||+|++.... ++|+...++|++++++|||+++|.|+|+++++++.... . .+.
T Consensus 222 ~~~~~~~g~~~v~vDaaQ~~g~~-----------piDv~~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~-l---~p~ 286 (805)
T PLN02724 222 HSNFSKSGRWMVLLDAAKGCGTS-----------PPDLSRYPADFVVVSFYKIFGYPTGLGALLVRRDAAKL-L---KKK 286 (805)
T ss_pred ccccccCcceEEEeehhhhcCCC-----------CCChhhcCCCEEEEecceeccCCCCceEEEEehhhhhh-h---cCC
Confidence 357999999764443 47777889999999999997669999998888653221 1 112
Q ss_pred cCCCcc-----------------CCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCC------
Q 009181 375 WSGGLY-----------------VSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIP------ 431 (541)
Q Consensus 375 ~~~~~~-----------------~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~------ 431 (541)
+.||.. ......|+.....++++.++++++...|++++.++...+++++.+.|++++
T Consensus 287 ~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~ 366 (805)
T PLN02724 287 YFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAP 366 (805)
T ss_pred ccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCe
Confidence 222210 112345677667788999999998888999999999999999999999986
Q ss_pred CeEEecCC--------CeeEEEEecCCCC-----HHHHHHHHHhCCcee------cc------C----------------
Q 009181 432 ELFIIGRP--------DMTIVAFGSDVVD-----IFEVNDIMSSKGWHL------NP------L---------------- 470 (541)
Q Consensus 432 ~~~v~~~~--------~~~~v~f~~~~~~-----~~~l~~~l~~~G~~~------~~------~---------------- 470 (541)
+++++++. ..++|+|...+.+ ..++...+.+.|+.+ .. +
T Consensus 367 ~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~ 446 (805)
T PLN02724 367 VCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHV 446 (805)
T ss_pred EEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCc
Confidence 58888753 3689999887643 233444444555432 21 1
Q ss_pred ---------CCC-CeEEEEecCCCH-HHHHHHHHHHHHHHH
Q 009181 471 ---------QRP-NSIHICVTLQHV-AVVDVFLRDLRESVE 500 (541)
Q Consensus 471 ---------~~~-~~iRi~~~~~~~-e~id~~i~~L~~~~~ 500 (541)
+.+ +.+|+|++.+|+ +|||+|++.|++..-
T Consensus 447 c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 447 CWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred cCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 113 889999999998 999999999999763
No 62
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.93 E-value=1.1e-23 Score=232.91 Aligned_cols=359 Identities=14% Similarity=0.091 Sum_probs=256.4
Q ss_pred CCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCceeeeecCCCCcccHHHHHH--HHHHhhcccCCCCcccchHHHHHHHH
Q 009181 99 WWTELPRAGLG-VGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLIN--EACSMFAHTNPLHLDIFQSVARFEAE 175 (541)
Q Consensus 99 ~~~~lP~~g~~-~~i~~~l~~~~~~~~~~~~~~~g~~y~~~~~~~~~~~~~~--~~~~~~~~~n~~~~~~~~~~~~~e~e 175 (541)
.+..||+ +.+ .|+++++.++...+..+..+..++.|+...++.....++. ++++ ..+|++++.++|..++..+
T Consensus 38 ~~l~lp~-~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~~~T---aytPyQ~EisQG~Le~l~e 113 (939)
T TIGR00461 38 RPLQLEA-PSKEYEALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYT---AYTPYQPEISQGRLEALLN 113 (939)
T ss_pred CCCCCCC-CCCHHHHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCchhhh---cCCCCChhhhhHHHHHHHH
Confidence 3466776 568 9999999999666555545555566654443111112221 3344 4489999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH----HhhcCCeEE
Q 009181 176 VIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA----AQYFNIKLW 251 (541)
Q Consensus 176 v~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka----~~~~G~~v~ 251 (541)
+++|+++++|++..+ . .+..++|.+...++++.+... ++ +++|++++..||..... ++..|++++
T Consensus 114 ~Qt~i~eLtGm~~aN----a--Sl~d~atA~aEa~~~a~~~~~--~~---~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~ 182 (939)
T TIGR00461 114 FQTVVSDLTGLPVAN----A--SLLDEGTAAAEAMALSFNVSK--KK---ANKFFVAKDLHPQTKSVLHTRAKPFGIEVI 182 (939)
T ss_pred HHHHHHHHHCCChhh----h--hccchhhHHHHHHHHHHHhhc--CC---CCEEEECCCCCcchHHHHHHHHHhcCcEEE
Confidence 999999999999876 4 788999988887777665321 11 37899999999996644 457799998
Q ss_pred EeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 252 RVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
.++ .++|++.+ +++++++++|++ .|.+.|+++|++++|++|.++++++-.-...+ ..+
T Consensus 183 ~~~--------~~~l~~~~--~~~~v~~q~Pn~-~G~ied~~~i~~~~h~~gal~~~~ad~~al~l-----------l~~ 240 (939)
T TIGR00461 183 VVD--------CSDIKKAV--DVFGCLLQYPAT-DGSILDYKQLIDALHSHKSLVSVAADLMALTL-----------LTP 240 (939)
T ss_pred EEc--------HHHHhhcC--CEEEEEEECCCC-CeEEecHHHHHHHHHHcCCEEEEEechHHhCC-----------cCC
Confidence 874 34677666 688999999987 99999999999999999999999766422211 122
Q ss_pred cCCCCceEEEeCCCCCC----CCCCCceEEEEecccccccccccc---cccCCCc-c----CCCcccCCCCCc-------
Q 009181 332 FSVQGVTSISVDVHKYG----LAPKGTSVVLYRNREIRKHQFVAV---TEWSGGL-Y----VSPTVAGSRPGG------- 392 (541)
Q Consensus 332 ~~~~gvdsis~~~hK~~----~~p~g~g~ll~~~~~~~~~~~~~~---~~~~~~~-~----~~~~~~gsr~~~------- 392 (541)
....|+|++..+.++|| ||+++.|++.++++-.+...-+.. .+-.|.. + -+...+=+|-.+
T Consensus 241 Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~ 320 (939)
T TIGR00461 241 PGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTA 320 (939)
T ss_pred HHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHH
Confidence 35678999988888886 456668988888764443221111 1111110 0 011111122111
Q ss_pred -hHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceecc
Q 009181 393 -LIAGAWAA--LMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP 469 (541)
Q Consensus 393 -~~a~~~~a--l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~ 469 (541)
...+..++ +.++|.+|++++.+++..++.+|++.|++ .|+++..++.+..+.+++...+..++.+++.++|+.+..
T Consensus 321 qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~~~fF~~~~v~~~~~~~~~i~~~~~~~gi~l~~ 399 (939)
T TIGR00461 321 QVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELINKTWFDTLTVKVGNGISSELLKAAEEFNINLRA 399 (939)
T ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCccceEEEEeCCCCHHHHHHHHHHCCCeeee
Confidence 11233333 45689999999999999999999999999 599999887788888887535688999999999998765
Q ss_pred CCCCCeEEEEecCCCH-HHHHHHHHHHH
Q 009181 470 LQRPNSIHICVTLQHV-AVVDVFLRDLR 496 (541)
Q Consensus 470 ~~~~~~iRi~~~~~~~-e~id~~i~~L~ 496 (541)
. ..+.+++|++..++ +|++.+++.+.
T Consensus 400 ~-~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 400 V-DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred c-CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 3 23689999999988 99999999885
No 63
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.6e-23 Score=218.71 Aligned_cols=311 Identities=14% Similarity=0.143 Sum_probs=223.7
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCCC--CCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNKE--KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~~--~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
..|....+...+.+.+++++++.+|.+. .+ ++ ++|+|+++++..++.++.+ +| ++|+++.+.|+.
T Consensus 59 ~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~---~i--~~t~G~~~~l~~~~~~~~~-----~g---d~Vlv~~P~y~~ 125 (389)
T PRK05957 59 HKYQAVQGIPPLLEAITQKLQQDNGIELNNEQ---AI--VVTAGSNMAFMNAILAITD-----PG---DEIILNTPYYFN 125 (389)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---eE--EEeCChHHHHHHHHHHhcC-----CC---CEEEEeCCCCcC
Confidence 3455566777888889999999999742 22 25 8999999999988887643 66 899999999999
Q ss_pred HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccc
Q 009181 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~ 315 (541)
+...++..|++++.+|.++++.+|+++|++++++++++|++++|+||||.+.| +++|+++|++||+++++|++|+.+
T Consensus 126 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~ 205 (389)
T PRK05957 126 HEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYF 205 (389)
T ss_pred HHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhc
Confidence 88888999999999999888899999999999999999999999999999987 889999999999999999999876
Q ss_pred hhhhhhhcCCCCCCCCc-CCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCc
Q 009181 316 VLPFAKKLGYPIPPFDF-SVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG 392 (541)
Q Consensus 316 ~~~f~~~~g~~~p~~~~-~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~ 392 (541)
... .... .+.... ....-.+...++.|. ++..| +|+++..+ ++.+........+..+ .
T Consensus 206 ~~~---~~~~-~~~~~~~~~~~~~i~~~S~SK~-~g~~GlRiG~~~~~~-~~~~~~~~~~~~~~~~-------------~ 266 (389)
T PRK05957 206 TYD---GVKH-FSPGSIPGSGNHTISLYSLSKA-YGFASWRIGYMVIPI-HLLEAIKKIQDTILIC-------------P 266 (389)
T ss_pred cCC---CCCc-cChhhCCCccCcEEEEecchhh-ccCccceeEEEecCH-HHHHHHHHHHhhcccC-------------C
Confidence 531 1110 111111 111224556677798 55555 99877644 3332211111111000 0
Q ss_pred hHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCe-eEEEEecC-CCCHHHHHHHHH-hCCcee
Q 009181 393 LIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDM-TIVAFGSD-VVDIFEVNDIMS-SKGWHL 467 (541)
Q Consensus 393 ~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~-~~v~f~~~-~~~~~~l~~~l~-~~G~~~ 467 (541)
...++.++...+ +...+++..+++.++++++.+.|++++++..+.+|.. .+++++++ +.+..++.+.|. ++|+.+
T Consensus 267 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v 346 (389)
T PRK05957 267 PVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRVAV 346 (389)
T ss_pred CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCEEE
Confidence 122555555555 3445788888889999999999998877533445554 45556654 347788999987 578766
Q ss_pred cc---CCC--CCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 468 NP---LQR--PNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 468 ~~---~~~--~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
.. ++. .+++|++++..+.+++++.+++|.+.++++-
T Consensus 347 ~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 347 IPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred ccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhh
Confidence 43 222 3689999987677889999999998887654
No 64
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.5e-23 Score=219.30 Aligned_cols=319 Identities=18% Similarity=0.207 Sum_probs=224.5
Q ss_pred HHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCC
Q 009181 148 INEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGIT 225 (541)
Q Consensus 148 ~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~ 225 (541)
+.+.+.........+|...++..++++.+.+++.+.+|. ++++ + ++|+|+++++.+++.++.+ +|
T Consensus 51 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~----i--~~t~G~~~al~~~~~~l~~-----~g-- 117 (391)
T PRK08361 51 IKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDN----V--IVTAGAYEATYLAFESLLE-----EG-- 117 (391)
T ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCccc----E--EEeCChHHHHHHHHHHhcC-----CC--
Confidence 333333333333334544567788888888888877764 3444 6 8999999999999988753 66
Q ss_pred CCeEEecCCccchHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHH
Q 009181 226 RPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELAL 300 (541)
Q Consensus 226 ~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~ 300 (541)
++|++++++|+++...++..|++++.+|+++ ++.+|++++++++++++.++++++|+||||.+.| +++|+++|+
T Consensus 118 -~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~ 196 (391)
T PRK08361 118 -DEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAE 196 (391)
T ss_pred -CEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHH
Confidence 8999999999999999999999999999975 5689999999999999999999999999999998 889999999
Q ss_pred HcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCC
Q 009181 301 SHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGG 378 (541)
Q Consensus 301 ~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~ 378 (541)
++++++++|++|+.+... .... .+.... ....++++.+++|. ++..| +|+++..+ ++...... ...+...
T Consensus 197 ~~~~~ii~De~y~~~~~~---~~~~-~~~~~~-~~~~~i~~~s~SK~-~~~~GlRiG~~~~~~-~~~~~~~~-~~~~~~~ 268 (391)
T PRK08361 197 DYNIYILSDEPYEHFLYE---GAKH-YPMIKY-APDNTILANSFSKT-FAMTGWRLGFVIAPE-QVIKDMIK-LHAYIIG 268 (391)
T ss_pred HcCeEEEEEcccccceeC---CCCC-CCHhhc-CCCCEEEEecCchh-cCCcHhhhhhhccCH-HHHHHHHH-HHhhhcc
Confidence 999999999999876531 1000 111111 12347788899998 56556 89877643 33332111 1111000
Q ss_pred ccCCCcccCCCCCchHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC--CC
Q 009181 379 LYVSPTVAGSRPGGLIAGAWAALMSLGQ----EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV--VD 452 (541)
Q Consensus 379 ~~~~~~~~gsr~~~~~a~~~~al~~lg~----~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~--~~ 452 (541)
+ .....+.++...+.. +.+++..+...++++.+.+.|++++++++..+....++++..++ .+
T Consensus 269 ---------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~ 336 (391)
T PRK08361 269 ---------N---VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDETGMS 336 (391)
T ss_pred ---------C---CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCCCCC
Confidence 0 011244444444422 34677788888889999999999888876654434455566653 47
Q ss_pred HHHHHHHHH-hCCceecc---CC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 453 IFEVNDIMS-SKGWHLNP---LQ--RPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 453 ~~~l~~~l~-~~G~~~~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
..++.+.|. +.|+.+.. ++ .++++|++++. +.+++++.+++|+++++.
T Consensus 337 ~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 337 SEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEE 390 (391)
T ss_pred HHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 788888886 46876543 12 24789999985 557888888888887754
No 65
>PLN02721 threonine aldolase
Probab=99.93 E-value=1e-23 Score=217.37 Aligned_cols=290 Identities=22% Similarity=0.215 Sum_probs=201.6
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHH---HHhhcCCeEE
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK---AAQYFNIKLW 251 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~k---a~~~~G~~v~ 251 (541)
++++.+++++|.+. + +++++||+++..++.+... .+| ++|++++++|+++.+ .+...|++++
T Consensus 44 ~l~~~la~~~~~~~------~--~~~~~Gs~a~~~~l~~~~~----~~g---d~Vl~~~~~~~~~~~~~~~~~~~g~~~~ 108 (353)
T PLN02721 44 RLEEEMAKIFGKEA------A--LFVPSGTMGNLISVLVHCD----VRG---SEVILGDNSHIHLYENGGISTLGGVHPR 108 (353)
T ss_pred HHHHHHHHHhCCce------e--EEecCccHHHHHHHHHHcc----CCC---CeEEEcCccceehhcccchhhhcCceeE
Confidence 35557888888753 2 6778889898877777542 156 899999999987766 5778899999
Q ss_pred EeeCCCCCccCHHHHHHhhc-------cCceEEEeec-CCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 252 RVPVDKEFRADVKAIKKYIN-------RNTVLIVGSA-PGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~i~-------~~t~~vv~~~-~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
.+|.++++.+|+++++++|+ +++++|++++ ++||+|.+.| +++|.++|++||+++|+|+++..+...
T Consensus 109 ~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~-- 186 (353)
T PLN02721 109 TVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASV-- 186 (353)
T ss_pred ecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchh--
Confidence 99998889999999999998 5888999877 4678898765 789999999999999999987422210
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHH
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~a 400 (541)
..+. ..+....++|++++++||++.+|. |++++.++++..........+.++ .+... . .+.++
T Consensus 187 -~~~~---~~~~~~~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~-~~~~~ 249 (353)
T PLN02721 187 -ALGV---PVHRLVKAADSVSVCLSKGLGAPV--GSVIVGSKSFIRKAKRLRKTLGGG---------MRQVG-V-LAAAA 249 (353)
T ss_pred -hhCC---CHHHHhhhCCEEEEecccccCCce--eeEEecCHHHHHhHHHHHHhcCCC---------eehhH-H-HHHHH
Confidence 0111 111123478999999999965554 334556666544321111111111 00000 1 11122
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEE-ecCCCeeEEEEecCC---CCHHHHHHHHHhCCceeccCCCCCeE
Q 009181 401 LMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFI-IGRPDMTIVAFGSDV---VDIFEVNDIMSSKGWHLNPLQRPNSI 476 (541)
Q Consensus 401 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v-~~~~~~~~v~f~~~~---~~~~~l~~~l~~~G~~~~~~~~~~~i 476 (541)
+..+ +...+..++..++++++.+.|++++++++ +.++..++++++... .+..++.+.|.++|+.+... .++++
T Consensus 250 ~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~-~~~~l 326 (353)
T PLN02721 250 LVAL--QENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPG-NSSRI 326 (353)
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCCcEEecC-CCceE
Confidence 2222 22223345556778899999999888876 566667788888764 46789999999999887754 35689
Q ss_pred EEEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 477 HICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 477 Ri~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
|++++..++ +|+++++++|++++..
T Consensus 327 R~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 327 RVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred EEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 999985555 9999999999987653
No 66
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.93 E-value=7.5e-24 Score=218.02 Aligned_cols=330 Identities=19% Similarity=0.196 Sum_probs=222.6
Q ss_pred ceeeeecCCCCcccHHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHH
Q 009181 130 CSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILL 209 (541)
Q Consensus 130 ~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~ 209 (541)
+.|.-|.|........+.+.+.+..+.+ +...+....+......++++.+++++|.+. . +++++|++++..
T Consensus 6 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~-------iv~~sg~~a~~~ 76 (349)
T cd06454 6 FCSNDYLGLANHPEVIEAAKEALDKYGV-GAGGSRLISGTSDLHEELEEELAEFHGKEA-A-------LVFSSGYAANDG 76 (349)
T ss_pred cccCCccccCCCHHHHHHHHHHHHHhCC-CCCCcCeecCCchHHHHHHHHHHHHhCCCC-E-------EEeccHHHHHHH
Confidence 3445556655522244445555544321 111111222344555667789999999853 2 567777889988
Q ss_pred HHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc-----CceEEEeecCCC
Q 009181 210 AVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR-----NTVLIVGSAPGF 284 (541)
Q Consensus 210 al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~-----~t~~vv~~~~~~ 284 (541)
++.++.+ +| ++|+++.+.|+++..+++..|++++.++. +|.+++++++++ +++++++++++|
T Consensus 77 ~~~~~~~-----~g---d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~ 143 (349)
T cd06454 77 VLSTLAG-----KG---DLIISDSLNHASIIDGIRLSGAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYS 143 (349)
T ss_pred HHHHhcC-----CC---CEEEEehhhhHHHHHHHHHcCCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEecccc
Confidence 8776653 66 89999999999999999999999988763 478889988874 578999999999
Q ss_pred CCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccc
Q 009181 285 PHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREI 364 (541)
Q Consensus 285 ~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~ 364 (541)
++|.+.|+++|+++|+++|+++++|++++.+.++. .+...+.++....+.|++..++||+ +++.| |+++ .+++.
T Consensus 144 ~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~---~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~g-G~i~-~~~~~ 217 (349)
T cd06454 144 MDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGP---HGRGVEEFGGLTDDVDIIMGTLGKA-FGAVG-GYIA-GSKEL 217 (349)
T ss_pred CCCCccCHHHHHHHHHHcCCEEEEEccccccccCC---CCCChhhhccccccCcEEEeechhh-hcccC-CEEE-CCHHH
Confidence 99999999999999999999999999997443321 1100112333456789999999998 56655 6544 44444
Q ss_pred cccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEE
Q 009181 365 RKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIV 444 (541)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v 444 (541)
..........+. ..++.....+++..++++.+.. +++..++..++++++.+.|+++ ++++..++...++
T Consensus 218 ~~~~~~~~~~~~--------~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~ 286 (349)
T cd06454 218 IDYLRSYARGFI--------FSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIP 286 (349)
T ss_pred HHHHHHhchhhh--------ccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEE
Confidence 332211111111 1112222334456666655433 4677889999999999999987 7777766555555
Q ss_pred EEecC-CCCHHHHHHHHHhCCceeccCC------CCCeEEEEecCCCH-HHHHHHHHHHHHH
Q 009181 445 AFGSD-VVDIFEVNDIMSSKGWHLNPLQ------RPNSIHICVTLQHV-AVVDVFLRDLRES 498 (541)
Q Consensus 445 ~f~~~-~~~~~~l~~~l~~~G~~~~~~~------~~~~iRi~~~~~~~-e~id~~i~~L~~~ 498 (541)
++... +.+..++.+.|.++|+.+.... ..+.+|++++..++ +++++++++|+++
T Consensus 287 ~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 287 PLIGDDPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEeCCChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 55443 2356789999999998765321 13689999987655 9999999999875
No 67
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=2.7e-23 Score=209.32 Aligned_cols=315 Identities=17% Similarity=0.204 Sum_probs=249.3
Q ss_pred cchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch--HHHH
Q 009181 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YDKA 242 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s--~~ka 242 (541)
.+|.+..+-.++.+.+..+++.+... +-+++++||.++..++..+.. +| ++|++....-++ |...
T Consensus 32 ~s~~F~~~~~~~~~~L~~v~~t~~~~-----~~ll~gsGt~amEAav~sl~~-----pg---dkVLv~~nG~FG~R~~~i 98 (383)
T COG0075 32 RSPDFVGIMKEVLEKLRKVFGTENGD-----VVLLSGSGTLAMEAAVASLVE-----PG---DKVLVVVNGKFGERFAEI 98 (383)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCc-----EEEEcCCcHHHHHHHHHhccC-----CC---CeEEEEeCChHHHHHHHH
Confidence 46888899999999999999998544 337888899999999998874 67 899988888777 7889
Q ss_pred HhhcCCeEEEeeCCCCCccCHHHHHHhhccC--ceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 243 AQYFNIKLWRVPVDKEFRADVKAIKKYINRN--TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 243 ~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~--t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
++.+|++++.+..+..-.+|+++++++++++ ...|.++|..|+||+..|+++|+++|++||..++||++.+-+.
T Consensus 99 a~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg---- 174 (383)
T COG0075 99 AERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGG---- 174 (383)
T ss_pred HHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCC----
Confidence 9999999999999887789999999999954 6799999999999999999999999999999999999964332
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEeccccccc-------ccccccccCCCccCCCcccCCCCCch
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKH-------QFVAVTEWSGGLYVSPTVAGSRPGGL 393 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~gsr~~~~ 393 (541)
.+++...+|||.+...++|.+.+|+|.|++.++++.+... .|.....|..........+.+.+-..
T Consensus 175 -------~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~ 247 (383)
T COG0075 175 -------EPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNL 247 (383)
T ss_pred -------cccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHH
Confidence 2688899999999999999999999999998887754322 12222222111101123334555567
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC---eeEEEEecCCC-CHHHHHHHHHhC-Cceec
Q 009181 394 IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD---MTIVAFGSDVV-DIFEVNDIMSSK-GWHLN 468 (541)
Q Consensus 394 ~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~f~~~~~-~~~~l~~~l~~~-G~~~~ 468 (541)
+.++..+++.+-.+|++++.++...+++++++.++++ |++++.++. ..+.++..+.. +..++...+.++ |+.+.
T Consensus 248 i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~ 326 (383)
T COG0075 248 IYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIA 326 (383)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCCCCcHHHHHHHHHhCCEEec
Confidence 8899999999999999999999999999999999998 999988542 45667776543 433444455555 66655
Q ss_pred cCCCC---CeEEEEe-cCCCHHHHHHHHHHHHHHHHHHHc
Q 009181 469 PLQRP---NSIHICV-TLQHVAVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 469 ~~~~~---~~iRi~~-~~~~~e~id~~i~~L~~~~~~l~~ 504 (541)
.-+.+ ..+||.. +..+.+++...+.+|+.++.++..
T Consensus 327 gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 327 GGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred ccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 43322 5899954 544559999999999999988765
No 68
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.2e-23 Score=216.11 Aligned_cols=324 Identities=18% Similarity=0.189 Sum_probs=226.1
Q ss_pred HHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC
Q 009181 147 LINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI 224 (541)
Q Consensus 147 ~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi 224 (541)
.+.+++...+.....+|....+...+++.+.+++.+.+|. ++++ + ++|+|+++++..++.++.+ +|
T Consensus 48 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~----i--~~~~g~~~a~~~~~~~~~~-----~g- 115 (393)
T PRK05764 48 HIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQ----V--IVTTGAKQALYNAFMALLD-----PG- 115 (393)
T ss_pred HHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHH----E--EEeCCcHHHHHHHHHHhcC-----CC-
Confidence 3444444444333344555567788888888888777664 3443 6 8999999999999888753 56
Q ss_pred CCCeEEecCCccchHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHH
Q 009181 225 TRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELA 299 (541)
Q Consensus 225 ~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la 299 (541)
++|+++++.|..+..+++.+|++++.+|+++ ++.+|++++++++++++++|++++|+||+|.+.+ +++|.++|
T Consensus 116 --d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a 193 (393)
T PRK05764 116 --DEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVA 193 (393)
T ss_pred --CEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHH
Confidence 8999999999999999999999999999974 5789999999999989999999999999999865 88999999
Q ss_pred HHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCC
Q 009181 300 LSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSG 377 (541)
Q Consensus 300 ~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~ 377 (541)
++||+++++|++|+.+... .........+.....+.+++..++.|. ++.+| +|+++ .++++..........+.
T Consensus 194 ~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~SK~-~~~~G~RiG~i~-~~~~~~~~~~~~~~~~~- 268 (393)
T PRK05764 194 VEHDIWVLSDEIYEKLVYD--GAEFTSIASLSPELRDRTITVNGFSKA-YAMTGWRLGYAA-GPKELIKAMSKLQSHST- 268 (393)
T ss_pred HHCCcEEEEeccccceeeC--CCCcccHHHcCCCCcCCEEEEecCccc-ccCccceeEEEe-cCHHHHHHHHHHHhhcc-
Confidence 9999999999999876431 100000111111223456777788999 45445 78766 44444332211111000
Q ss_pred CccCCCcccCCCCCchHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC----
Q 009181 378 GLYVSPTVAGSRPGGLIAGAWAALMSLG--QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV---- 451 (541)
Q Consensus 378 ~~~~~~~~~gsr~~~~~a~~~~al~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~---- 451 (541)
.. ....+++++...+. .+.+++..++..++++++.+.|++++++.+..+....++++...+.
T Consensus 269 ----------~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~~~ 336 (393)
T PRK05764 269 ----------SN--PTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLGKS 336 (393)
T ss_pred ----------cC--CChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccccc
Confidence 00 11235566655553 4556677778888899999999998888877544444556565432
Q ss_pred --CHHHHHHHHH-hCCceecc---CCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 452 --DIFEVNDIMS-SKGWHLNP---LQRPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 452 --~~~~l~~~l~-~~G~~~~~---~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
+..++.+.+. +.|+.+.. ++.++++|+|++. +.+++++++++|++++++.
T Consensus 337 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~-~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 337 ITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYAT-SLEDLEEGLERIERFLESL 392 (393)
T ss_pred cCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 2477887775 56877643 2335799999985 4699999999999988653
No 69
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.93 E-value=8.2e-23 Score=202.29 Aligned_cols=351 Identities=17% Similarity=0.184 Sum_probs=257.3
Q ss_pred CCCc-HHHHHHHHHHhCCCCCCCCCceeeeecCCCCcccHHHHHH--HHHHhhcccCCCCcccchHHHHHHHHHHHHHHH
Q 009181 106 AGLG-VGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLIN--EACSMFAHTNPLHLDIFQSVARFEAEVIAMTAA 182 (541)
Q Consensus 106 ~g~~-~~i~~~l~~~~~~~~~~~~~~~g~~y~~~~~~~~~~~~~~--~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~ 182 (541)
++.+ .++++++++....+..+.+++..++|....++.....++. ++|+ ..+|++++.++|..+...+.+.++++
T Consensus 55 ~~~sE~e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~pewyT---aYTPYQpEISQGrLqaLfefQtlv~d 131 (450)
T COG0403 55 KPLSEYEALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENPEWYT---AYTPYQPEISQGRLEALFEFQTLVAD 131 (450)
T ss_pred CCCCHHHHHHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCccccc---cCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 3558 9999999999777765556666666666555211112221 3443 44899999999999999999999999
Q ss_pred HhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHh----hcCCeEEEeeCCCC
Q 009181 183 LLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQ----YFNIKLWRVPVDKE 258 (541)
Q Consensus 183 l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~----~~G~~v~~v~~~~~ 258 (541)
++|++..+ . .+..++|.+-..++++.|....+ +.+++++...|+......+ -+|++++.++.+
T Consensus 132 LTGm~VAN----A--Sm~DeaTAaAEAm~ma~r~~k~k-----~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-- 198 (450)
T COG0403 132 LTGLDVAN----A--SMLDEATAAAEAMLMAKRVTKKK-----RNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-- 198 (450)
T ss_pred HhCCCccc----c--hhhhhHHHHHHHHHHHHHhhcCc-----CceEEecCCCCHHHHHHHHhhcccCceEEEEeccc--
Confidence 99999887 3 78899998888888887753222 2789999999999666554 457888888877
Q ss_pred CccCHHHHHHhhccCceEEEeecCCCCCc-cccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc
Q 009181 259 FRADVKAIKKYINRNTVLIVGSAPGFPHG-IIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV 337 (541)
Q Consensus 259 ~~~d~~~Le~~i~~~t~~vv~~~~~~~~G-~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv 337 (541)
|.++|+++.+.+++++++.+|++ +| .+.|+.+|.+.+|++|..++|=.-.= .++.-.|| ...|+
T Consensus 199 ---d~~~l~~~~~~~~~gv~vQyP~~-~G~~~~d~~~l~~~~h~~~al~~v~aDpl--------aL~LL~pP---Ge~GA 263 (450)
T COG0403 199 ---DLDDLESADDGDVFGVLVQYPNT-FGIVEEDLRALIEAAHSAGALVIVAADPL--------ALGLLKPP---GEFGA 263 (450)
T ss_pred ---hhhhhhhccccCeEEEEEecCCC-CCccchhHHHHHHHHhhcCCEEEEEechh--------HhhccCCc---cccCC
Confidence 88999999445899999999996 77 77789999999999999887655421 11211222 45789
Q ss_pred eEEEeCCCCCC----CCCCCceEEEEecccccccccccccccCCCccCC-CcccCC---------------CCC------
Q 009181 338 TSISVDVHKYG----LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVS-PTVAGS---------------RPG------ 391 (541)
Q Consensus 338 dsis~~~hK~~----~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gs---------------r~~------ 391 (541)
|++..+++.+| ||++.+|++.++++-.|+. +|...+. -...|. |-.
T Consensus 264 DIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~m--------PGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNIC 335 (450)
T COG0403 264 DIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQM--------PGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNIC 335 (450)
T ss_pred ceEEecCcccCCCcCCCCcceeeeeEhHhHhhcC--------CCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhh
Confidence 99999999885 7777799988887754432 2211111 111222 211
Q ss_pred ------chHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCC-CeEEecCCCeeEEEEecCCCCHHHHHHHHHhCC
Q 009181 392 ------GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIP-ELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKG 464 (541)
Q Consensus 392 ------~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G 464 (541)
+++++.|+++ +|.+|++++.+++..++.+++++|+++. |++++.+..+..+.++........+.++....|
T Consensus 336 TnQaLlA~~As~y~~~--hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~~~~~~l~~~~~~~G 413 (450)
T COG0403 336 TNQALLALAASMYAVY--HGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPEEVAEALLAAAIAGG 413 (450)
T ss_pred HHHHHHHHHHHHHHHH--hChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecchhHHHHHHHHHHhcC
Confidence 3455666665 8999999999999999999999999752 699988877888888876533455666667778
Q ss_pred ceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHH
Q 009181 465 WHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRES 498 (541)
Q Consensus 465 ~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~ 498 (541)
+.+..... ..+-+|++..++ ++++.+++.+...
T Consensus 414 ~~L~~~~~-~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 414 INLRRVDA-DTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred CceeeecC-CceEEEeecccCHHHHHHHHHHHhhh
Confidence 77765443 367889998877 9999999988764
No 70
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.93 E-value=3.5e-23 Score=212.46 Aligned_cols=316 Identities=15% Similarity=0.108 Sum_probs=229.4
Q ss_pred hhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecC
Q 009181 154 MFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPV 233 (541)
Q Consensus 154 ~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~ 233 (541)
.....+...+...++..++++++.+++...++.+... .++ ++++|+|+++..++.++.. +| ++|+++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~--~~~~~~t~a~~~~~~~~~~-----~g---~~vl~~~ 90 (350)
T cd00609 23 AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPP--EEI--VVTNGAQEALSLLLRALLN-----PG---DEVLVPD 90 (350)
T ss_pred HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc--ceE--EEecCcHHHHHHHHHHhCC-----CC---CEEEEcC
Confidence 3445555667777888899998888888887643211 125 8999999999999988853 55 8999999
Q ss_pred CccchHHHHHhhcCCeEEEeeCCCCCccCH--HHHHHhhccCceEEEeecCCCCCccccCHHHH---HHHHHHcCCEEEE
Q 009181 234 SAHSAYDKAAQYFNIKLWRVPVDKEFRADV--KAIKKYINRNTVLIVGSAPGFPHGIIDPIQEL---GELALSHGTCLHV 308 (541)
Q Consensus 234 ~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~--~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I---~~la~~~~i~lhv 308 (541)
+.|.++..+++..|++++.++.++++..+. +.+++.+++++.+|++++++||+|.+.|++++ .++|+++|+++|+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~iv 170 (350)
T cd00609 91 PTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIIS 170 (350)
T ss_pred CCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEE
Confidence 999999999999999999999988776665 78888888899999999999999999986655 5899999999999
Q ss_pred eCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccC
Q 009181 309 DLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAG 387 (541)
Q Consensus 309 D~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 387 (541)
|++++++... .... .........+.|++..++||++. ++.+.|+++.+++++...... ...+. .+
T Consensus 171 D~a~~~~~~~---~~~~-~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~-~~~~~---------~~ 236 (350)
T cd00609 171 DEAYAELVYD---GEPP-PALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKK-LLPYT---------TS 236 (350)
T ss_pred ecchhhceeC---Cccc-ccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHH-HHHhc---------cc
Confidence 9999877642 1000 00122345567899999999965 556688877766444332211 11110 11
Q ss_pred CCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-CHHHHHHHHHhCCce
Q 009181 388 SRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV-DIFEVNDIMSSKGWH 466 (541)
Q Consensus 388 sr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~-~~~~l~~~l~~~G~~ 466 (541)
+.+.....+...+++... +++++..+++.++++++.+.|++.+...+..++...++++...+. +...+.+.|.+.|+.
T Consensus 237 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~ 315 (350)
T cd00609 237 GPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVV 315 (350)
T ss_pred CCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEE
Confidence 122222334455544332 688999999999999999999998555443445566777777654 455677788888987
Q ss_pred eccCC-----CCCeEEEEecCCCHHHHHHHHHHHHH
Q 009181 467 LNPLQ-----RPNSIHICVTLQHVAVVDVFLRDLRE 497 (541)
Q Consensus 467 ~~~~~-----~~~~iRi~~~~~~~e~id~~i~~L~~ 497 (541)
+.... .+.++|++++.. .+|+++++++|++
T Consensus 316 i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~~ 350 (350)
T cd00609 316 VRPGSAFGEGGEGFVRLSFATP-EEELEEALERLAE 350 (350)
T ss_pred EecccccccCCCCeEEEEeeCC-HHHHHHHHHHhhC
Confidence 76542 457999999987 8999999998863
No 71
>PLN02822 serine palmitoyltransferase
Probab=99.93 E-value=2.9e-23 Score=221.17 Aligned_cols=327 Identities=17% Similarity=0.146 Sum_probs=219.8
Q ss_pred HHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC
Q 009181 144 HFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (541)
Q Consensus 144 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G 223 (541)
..+.+.+.+..+-. +...+..+.+......++++.++++++.+. . + ++++|++ ++..++.++.+ +|
T Consensus 128 i~ea~~~al~~~G~-g~~g~r~~yg~~~~~~~Lee~La~~~~~~~-~----i--~~s~G~~-a~~sai~a~~~-----~g 193 (481)
T PLN02822 128 IKESCTSALEKYGV-GSCGPRGFYGTIDVHLDCETKIAKFLGTPD-S----I--LYSYGLS-TIFSVIPAFCK-----KG 193 (481)
T ss_pred HHHHHHHHHHHhCC-CCcccCccccCHHHHHHHHHHHHHHhCCCC-E----E--EECCHHH-HHHHHHHHhCC-----CC
Confidence 44555555555422 222333344556777778889999999764 2 4 6777766 67777776643 66
Q ss_pred CCCCeEEecCCccchHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhc--cCc-eEEEeecCCCCCccccCHHHHHHH
Q 009181 224 ITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYIN--RNT-VLIVGSAPGFPHGIIDPIQELGEL 298 (541)
Q Consensus 224 i~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~--~~t-~~vv~~~~~~~~G~id~i~~I~~l 298 (541)
+.|++....|+++..++...|.+++.++.++ +++.+++++++... +++ ++|++..+++++|.+.|+++|.++
T Consensus 194 ---d~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l 270 (481)
T PLN02822 194 ---DIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRL 270 (481)
T ss_pred ---CEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHH
Confidence 8999999999999999999999999999873 22333333333221 334 799999999999999999999999
Q ss_pred HHHcCCEEEEeCCcccchhhhhhhcCCC-CCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCC
Q 009181 299 ALSHGTCLHVDLCLGGFVLPFAKKLGYP-IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG 377 (541)
Q Consensus 299 a~~~~i~lhvD~a~gg~~~~f~~~~g~~-~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~ 377 (541)
|++||++|++|++|+.+++ ...|.. ...++.....+|+++.++.|. +++.| |+++ .++++..++......+
T Consensus 271 ~~k~~~~LIvDEa~s~gvl---G~~G~G~~e~~~v~~~~~dii~~s~sKa-lg~~G-G~i~-g~~~ii~~~~~~~~~~-- 342 (481)
T PLN02822 271 KEKYRFRVLLDESNSFGVL---GKSGRGLSEHFGVPIEKIDIITAAMGHA-LATEG-GFCT-GSARVVDHQRLSSSGY-- 342 (481)
T ss_pred HHHcCCEEEEECCcccccc---CCCCCChHHHcCCCCCCCeEEEecchhh-hhhCC-eEEE-cCHHHHHHHHhcCCce--
Confidence 9999999999999984443 222211 111222224579999999999 56665 6544 4555544332111111
Q ss_pred CccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC------
Q 009181 378 GLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV------ 451 (541)
Q Consensus 378 ~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~------ 451 (541)
+..++.+....+++.++++.+. ...+..++..++++++++.|++++|+.+..++..+++.+...+.
T Consensus 343 ------~fsa~lPp~~~~Aa~~aL~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~ 414 (481)
T PLN02822 343 ------VFSASLPPYLASAAITAIDVLE--DNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKE 414 (481)
T ss_pred ------eeccccCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccc
Confidence 1111222222233344554432 23678889999999999999998888887667778887777532
Q ss_pred C---HHHHHHHHH-hCCceeccCC--------CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 452 D---IFEVNDIMS-SKGWHLNPLQ--------RPNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 452 ~---~~~l~~~l~-~~G~~~~~~~--------~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
+ ..++++.|. ++|+.+.... .+..+|+|++..++ +|+++++++|+++++++.
T Consensus 415 ~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~ 479 (481)
T PLN02822 415 DLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVL 479 (481)
T ss_pred hHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1 357888887 7897765321 13579999987666 999999999999988764
No 72
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.3e-22 Score=212.98 Aligned_cols=309 Identities=14% Similarity=0.144 Sum_probs=223.8
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCC--C-CCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNK--E-KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~--~-~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~ 237 (541)
.+|...++...+.+.+.+++++.+|.+ + ++ + ++|+|+++++.+++.++.+ +| ++|+++.++|+
T Consensus 72 ~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~----I--~it~Ga~~al~~~~~~l~~-----~G---d~Vlv~~P~y~ 137 (405)
T PRK06207 72 QAYTEYRGDADIRELLAARLAAFTGAPVDAADE----L--IITPGTQGALFLAVAATVA-----RG---DKVAIVQPDYF 137 (405)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC----E--EEeCCcHHHHHHHHHHhcC-----CC---CEEEEeCCCch
Confidence 345555677888888999999999964 3 43 6 8999999999999998753 67 99999999999
Q ss_pred hHHHHHhhcCCeEEEeeCC-----CCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEe
Q 009181 238 AYDKAAQYFNIKLWRVPVD-----KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVD 309 (541)
Q Consensus 238 s~~ka~~~~G~~v~~v~~~-----~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD 309 (541)
.+...++.+|++++.|+++ +++.+|+++|+++++++++++++++|+||||.+.+ +++|+++|++||+++++|
T Consensus 138 ~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~D 217 (405)
T PRK06207 138 ANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVD 217 (405)
T ss_pred hHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 9999999999999999986 25789999999999989999999999999999987 778999999999999999
Q ss_pred CCcccchhhhhhhcCCCCCCC-CcC-CCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCccc
Q 009181 310 LCLGGFVLPFAKKLGYPIPPF-DFS-VQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVA 386 (541)
Q Consensus 310 ~a~gg~~~~f~~~~g~~~p~~-~~~-~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (541)
++|+.+... +...+.+ .+. ...-.++..++.|... .+..+|+++. ++++..........+..+
T Consensus 218 e~Y~~~~~~-----~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~-~~~l~~~~~~~~~~~~~~-------- 283 (405)
T PRK06207 218 QLYSRLLYD-----GTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFG-SPAIIDRMEKLQAIVSLR-------- 283 (405)
T ss_pred ccccccccC-----CCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEc-CHHHHHHHHHHHhHhccC--------
Confidence 999876531 1001111 111 1123466778899943 3445998654 444433221111111100
Q ss_pred CCCCCchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC--CCHHHHHHHHH-
Q 009181 387 GSRPGGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV--VDIFEVNDIMS- 461 (541)
Q Consensus 387 gsr~~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~--~~~~~l~~~l~- 461 (541)
.+ ...+.++...+ +...+++..++..+.++++.+.|++++++++..+....+++++.++ .+..++.+.|.
T Consensus 284 ~~-----~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l~~ 358 (405)
T PRK06207 284 AA-----GYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHDFVKILRL 358 (405)
T ss_pred CC-----HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCCCHHHHHHHHHH
Confidence 00 11333333334 2344677888888889999999988878876654456677777764 36788999886
Q ss_pred hCCceecc---C--CCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 462 SKGWHLNP---L--QRPNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 462 ~~G~~~~~---~--~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
+.|+.+.. + ..++++|+|++. ..+++++.+++|++++++++
T Consensus 359 ~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 359 QAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred hcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhh
Confidence 67876543 1 225799999996 56889999999999887654
No 73
>PRK07179 hypothetical protein; Provisional
Probab=99.92 E-value=2.9e-23 Score=218.25 Aligned_cols=289 Identities=16% Similarity=0.143 Sum_probs=206.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEE
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~ 252 (541)
..++.+.+++++|.+. + ++|+||++|+..+++++.. +| +.|+++...|+++...++..|+++..
T Consensus 101 ~~~le~~la~~~g~~~------~--~~~~sG~~An~~~l~~l~~-----~g---~~v~~~~~~h~s~~~~~~~~g~~~~~ 164 (407)
T PRK07179 101 KPQFEKKLAAFTGFES------C--LLCQSGWAANVGLLQTIAD-----PN---TPVYIDFFAHMSLWEGVRAAGAQAHP 164 (407)
T ss_pred HHHHHHHHHHHhCCCc------E--EEECCHHHHHHHHHHHhCC-----CC---CEEEEECCcCHHHHHHHHHCCCeEEE
Confidence 3445568889998853 2 7899999999999998753 55 78999999999999888899988776
Q ss_pred eeCCCCCccCHHHHHHhhcc-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCC-CCCC
Q 009181 253 VPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYP-IPPF 330 (541)
Q Consensus 253 v~~~~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~-~p~~ 330 (541)
++. .|+++|++++++ ++.+|++++++||+|.+.|+++|.++|++||+++|+|++|+.+.. ...|.. +..+
T Consensus 165 ~~~-----~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~---g~~g~g~~~~~ 236 (407)
T PRK07179 165 FRH-----NDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTH---GPQGAGLVAEL 236 (407)
T ss_pred ecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCc---CCCCCchHHhc
Confidence 654 499999999986 588999999999999999999999999999999999999975432 111110 1012
Q ss_pred CcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHH
Q 009181 331 DFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYL 410 (541)
Q Consensus 331 ~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~ 410 (541)
+. ..++|+++.++||++ ++ ++|+++.+ +++..........+ ...++-....+++..++++.+. ...
T Consensus 237 ~~-~~~vdi~~~S~sK~~-g~-~~G~l~~~-~~~~~~~~~~~~~~--------~~~~t~~~~~~aa~~aal~~~~--~~~ 302 (407)
T PRK07179 237 GL-TSRVHFITASLAKAF-AG-RAGIITCP-RELAEYVPFVSYPA--------IFSSTLLPHEIAGLEATLEVIE--SAD 302 (407)
T ss_pred CC-CCCCCEEEeechHhh-hc-cCeEEEeC-HHHHHHHHHhCcCe--------eeCCCCCHHHHHHHHHHHHHHh--cCH
Confidence 22 146799999999994 55 37876654 33432221110000 0011222233445555665542 235
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-CHHHHHHHHHhCCceeccCC------CCCeEEEEecCC
Q 009181 411 ENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV-DIFEVNDIMSSKGWHLNPLQ------RPNSIHICVTLQ 483 (541)
Q Consensus 411 ~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~-~~~~l~~~l~~~G~~~~~~~------~~~~iRi~~~~~ 483 (541)
+..++..++++++++.|+++ ++++.+ ..+++.+..... +...+.+.|.++|+...... .++.+|++++..
T Consensus 303 ~~~~~l~~~~~~l~~~L~~~-g~~v~~--~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~ 379 (407)
T PRK07179 303 DRRARLHANARFLREGLSEL-GYNIRS--ESQIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNAD 379 (407)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCCCC--CCCEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCC
Confidence 67788999999999999987 777663 356777765432 45678889999998643221 236899999987
Q ss_pred CH-HHHHHHHHHHHHHHHHH
Q 009181 484 HV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 484 ~~-e~id~~i~~L~~~~~~l 502 (541)
++ +|++++++.|++++++.
T Consensus 380 ~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 380 LTASDLDRVLEVCREARDEV 399 (407)
T ss_pred CCHHHHHHHHHHHHHHHHhh
Confidence 77 99999999999988764
No 74
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.92 E-value=2.6e-23 Score=217.72 Aligned_cols=296 Identities=14% Similarity=0.105 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcC
Q 009181 168 SVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFN 247 (541)
Q Consensus 168 ~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G 247 (541)
+...+..++++.+++++|.+. + ++++||++|+..++.++. ++| |+|+++.+.|+++...++..+
T Consensus 80 G~~~~~~~le~~ia~~~g~~~------~--ii~~~~~~a~~~~~~~l~-----~~g---d~vi~~~~~~~s~~~~~~~~~ 143 (393)
T TIGR01822 80 GTQDIHKELEAKIAAFLGTED------T--ILYASCFDANGGLFETLL-----GAE---DAIISDALNHASIIDGVRLCK 143 (393)
T ss_pred CChHHHHHHHHHHHHHhCCCc------E--EEECchHHHHHHHHHHhC-----CCC---CEEEEeccccHHHHHHHHhcC
Confidence 445556667789999999852 2 677899999998877764 267 999999999999999999888
Q ss_pred CeEEEeeCCCCCccCHHHHHHhhcc------CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 248 IKLWRVPVDKEFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 248 ~~v~~v~~~~~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
.+...++ .+|++++++++++ +|++|+.++++|++|.+.|+++|+++|++||+++++|++|+...++
T Consensus 144 ~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~--- 215 (393)
T TIGR01822 144 AKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLG--- 215 (393)
T ss_pred CceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcC---
Confidence 8765544 3699999999875 7889999999999999999999999999999999999998643331
Q ss_pred hcCCC-CCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHH
Q 009181 322 KLGYP-IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (541)
Q Consensus 322 ~~g~~-~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~a 400 (541)
..|.. .+..+. ..++|+++.++||++. +...|+++. ++++..........+. ..++.+...+++..++
T Consensus 216 ~~~~~~~~~~~~-~~~~di~~~s~sK~l~-g~r~G~~~~-~~~~~~~l~~~~~~~~--------~~~~~~~~~~~a~~~a 284 (393)
T TIGR01822 216 PTGRGSHELCGV-MGRVDIITGTLGKALG-GASGGFTTA-RKEVVELLRQRSRPYL--------FSNSLPPAVVGASIKV 284 (393)
T ss_pred CCCCchHHhcCC-CCCCeEEEEEChHHhh-CCCcEEEEe-CHHHHHHHHHhCccce--------ecCCCCHHHHHHHHHH
Confidence 11110 011121 2368999999999954 445687554 4444332211111110 1122222223344555
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-CCHHHHHHHHHhCCceeccCCC------C
Q 009181 401 LMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-VDIFEVNDIMSSKGWHLNPLQR------P 473 (541)
Q Consensus 401 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~~~~~l~~~l~~~G~~~~~~~~------~ 473 (541)
++.+ ++.++..++..++++++.+.|++. ++++. ++..+++.+...+ .+..++.+.|.++|+.+..... .
T Consensus 285 l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~ 360 (393)
T TIGR01822 285 LEML--EASNELRDRLWANTRYFRERMEAA-GFDIK-PADHPIIPVMLYDAVLAQRFARRLLEEGIYVTGFFYPVVPKGQ 360 (393)
T ss_pred HHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCC
Confidence 5433 345677888899999999999886 77765 3345566665543 3567899999999976653222 1
Q ss_pred CeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 474 NSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 474 ~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
..+|++++..++ +|++++++.|+++.+++
T Consensus 361 ~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 361 ARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 469999998876 99999999999987764
No 75
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.4e-22 Score=211.11 Aligned_cols=291 Identities=19% Similarity=0.228 Sum_probs=206.6
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++++++++|.++.+ + ++|+|+|+++..++.++.. +| ++|+++++.|..+..+++..|++++.+|
T Consensus 70 ~lr~~ia~~l~~~~~~----v--~~~~g~t~al~~~~~~~~~-----~g---d~vl~~~p~y~~~~~~~~~~g~~~~~v~ 135 (380)
T PRK06225 70 ELRELILKDLGLDDDE----A--LITAGATESLYLVMRAFLS-----PG---DNAVTPDPGYLIIDNFASRFGAEVIEVP 135 (380)
T ss_pred HHHHHHHHhcCCCCCc----E--EEeCCHHHHHHHHHHHhcC-----CC---CEEEEcCCCCcchHHHHHHhCceEEeec
Confidence 4666888999998765 6 8999999999999988743 56 8899999999999999999999999999
Q ss_pred CCC---CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCC
Q 009181 255 VDK---EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIP 328 (541)
Q Consensus 255 ~~~---~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p 328 (541)
++. ++.+|+++++++++++++++++++|+||+|.+.+ +++|+++|+++|+++++|++|+.|... . .+
T Consensus 136 ~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~------~-~~ 208 (380)
T PRK06225 136 IYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFARE------H-TL 208 (380)
T ss_pred cccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhcc------C-Cc
Confidence 742 5789999999999999999999999999999755 889999999999999999999765321 1 00
Q ss_pred CCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHH--
Q 009181 329 PFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL-- 404 (541)
Q Consensus 329 ~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l-- 404 (541)
.... .....+...+++|+ +++.| +|+++.+ +++.+....... .. . + ....++.++...+
T Consensus 209 ~~~~-~~~~~i~~~s~SK~-~g~~G~RiG~i~~~-~~l~~~~~~~~~----~~-----~-~----~~~~~~~~a~~~l~~ 271 (380)
T PRK06225 209 AAEY-APEHTVTSYSFSKI-FGMAGLRIGAVVAT-PDLIEVVKSIVI----ND-----L-G----TNVIAQEAAIAGLKV 271 (380)
T ss_pred hhhc-CCCCEEEEeechhh-cCCccceeEEEecC-HHHHHHHHHHHh----cc-----c-C----CCHHHHHHHHHHHhc
Confidence 0111 12334556677899 46555 7987764 444332111100 00 0 0 0111233222222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEe-cCCCeeEEEEecCC--CCHHHHHHHHHhCCceeccC------CCCCe
Q 009181 405 GQEGYLENTKAIMEVSESIQKGIKEIPELFII-GRPDMTIVAFGSDV--VDIFEVNDIMSSKGWHLNPL------QRPNS 475 (541)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~~~~~~v~f~~~~--~~~~~l~~~l~~~G~~~~~~------~~~~~ 475 (541)
....+++..+...++.+++.+.|++++++.+. .++..+++++.+.+ .+..++.+.|.++|+.+... ..+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~ 351 (380)
T PRK06225 272 KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRY 351 (380)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCce
Confidence 22334444555566677888888887775432 34456677777643 47889999999999766432 12468
Q ss_pred EEEEecCCCHHHHHHHHHHHHHHHHHHHc
Q 009181 476 IHICVTLQHVAVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 476 iRi~~~~~~~e~id~~i~~L~~~~~~l~~ 504 (541)
+|+|+.. +++++++++++|++++++++.
T Consensus 352 iR~s~~~-~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 352 IRVSFSI-PREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred EEEEeCC-CHHHHHHHHHHHHHHHHHhhc
Confidence 9999985 569999999999999988764
No 76
>PRK07682 hypothetical protein; Validated
Probab=99.92 E-value=1.3e-22 Score=211.40 Aligned_cols=308 Identities=12% Similarity=0.104 Sum_probs=219.3
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
.+|...++..++.+.+.+++.+.+|.+ +++ ++ ++|+|+++|+.++++++.+ +| ++|++++++|+.
T Consensus 51 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~---~i--~~t~G~~~al~~~~~~l~~-----~g---d~vl~~~p~y~~ 117 (378)
T PRK07682 51 TSYTANAGLLELRQEIAKYLKKRFAVSYDPND---EI--IVTVGASQALDVAMRAIIN-----PG---DEVLIVEPSFVS 117 (378)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC---cE--EEeCChHHHHHHHHHHhCC-----CC---CEEEEeCCCchh
Confidence 345456778888888999998887764 322 36 8999999999999888753 66 899999999999
Q ss_pred HHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcc
Q 009181 239 YDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~g 313 (541)
+...++..|.+++.++++. ++.+|++++++++.++++++++++|+||||.+.+ +++|.++|++|++++++|++|+
T Consensus 118 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~ 197 (378)
T PRK07682 118 YAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYA 197 (378)
T ss_pred hHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhh
Confidence 9999999999999999863 6789999999999999999999999999999865 8899999999999999999998
Q ss_pred cchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCc
Q 009181 314 GFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG 392 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~ 392 (541)
.+... ....+++.+. ....-.++..++.|.+. .+..+|+++.. +++........ .+.. ...
T Consensus 198 ~~~~~---~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~i~~l~~~~-~~~~------------~~~ 259 (378)
T PRK07682 198 ELTYD---EAYTSFASIK-GMRERTILISGFSKGFAMTGWRLGFIAAP-VYFSEAMLKIH-QYSM------------MCA 259 (378)
T ss_pred hcccC---CCCCChhhcc-cccCCEEEEecCcccccChhhhhhhhhcC-HHHHHHHHHHH-Hhhc------------cCC
Confidence 77541 1000011111 11123567778899942 33348986654 44433221110 0100 000
Q ss_pred hHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEE-EEecC--CCCHHHHHHHHH-hCCce
Q 009181 393 LIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIV-AFGSD--VVDIFEVNDIMS-SKGWH 466 (541)
Q Consensus 393 ~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v-~f~~~--~~~~~~l~~~l~-~~G~~ 466 (541)
...++.++...+ +....++..++..++++++.+.|+++ ++++.. |..+++ +.... +.+..++.+.+. ++|+.
T Consensus 260 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~-p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~ 337 (378)
T PRK07682 260 PTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCHV-PGGAFYAFPSISSTGLSSEEFAEQLLLEEKVA 337 (378)
T ss_pred CHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccCC-CCeeEEEEEeccCCCCCHHHHHHHHHHhCCEE
Confidence 122455555555 34557778888889999999999987 777554 444444 44443 346788888875 67876
Q ss_pred ecc---CC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 467 LNP---LQ--RPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 467 ~~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
+.. ++ .++++|+|++. +.+++++.+++|+++++.+
T Consensus 338 v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 338 VVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred EcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence 643 22 25799999986 5699999999999988653
No 77
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.92 E-value=8.3e-23 Score=210.82 Aligned_cols=291 Identities=15% Similarity=0.123 Sum_probs=205.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC------------CCCCeEEecCCcc
Q 009181 169 VARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG------------ITRPEMIIPVSAH 236 (541)
Q Consensus 169 ~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G------------i~~~~vi~~~~~h 236 (541)
..++.+++++++++++|.+. + ++|+|+|+|+.++++++.+ +| ...++|+++.+.+
T Consensus 43 ~~~~~~~~~~~~a~~~g~~~------~--~~~~g~t~al~~al~al~~-----~Gd~~~~~~~~~s~~~~~eVi~~~~~~ 109 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVED------A--VIVSSASAGIAQSVAAVIT-----RGNRYLVENLHDSKIEVNEVVLPKGHN 109 (363)
T ss_pred HHHHHHHHHHHHHHhhCCCe------E--EEEcCHHHHHHHHHHHHhc-----CCCcchhhcccccccccceEEEECccc
Confidence 44667788999999999762 3 8999999999999999853 34 0124899887544
Q ss_pred ch----HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEE-eecCCCCCccccCHHHHHHHHHHcCCEEEEeCC
Q 009181 237 SA----YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIV-GSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 237 ~s----~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv-~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a 311 (541)
+. +..++...|++++.++.+ +.+|+++++++|+++|++++ ++.+++++|.+.|+++|+++|++||+++|+|++
T Consensus 110 ~~~~~~~~~~~~~~g~~~v~v~~~--~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a 187 (363)
T TIGR01437 110 VDYGAPVETMVRLGGGKVVEAGYA--NECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAA 187 (363)
T ss_pred hhcCCchHHHHHhcCCeEEEEcCC--CCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECC
Confidence 43 356778889999999863 56999999999999998766 567788999999999999999999999999999
Q ss_pred cccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCC
Q 009181 312 LGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG 391 (541)
Q Consensus 312 ~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~ 391 (541)
++... . .....|+|++++++||++.+|. .|+++. +++....... .+.+.. .....|+
T Consensus 188 ~~~~~----~---------~~~~~g~D~~~~S~~K~l~gp~-~G~l~~-~~~~i~~~~~---~~~~~~--~~~~~~~--- 244 (363)
T TIGR01437 188 AEEDL----Q---------KYYRLGADLVIYSGAKAIEGPT-SGLVLG-KKKYIEWVKL---QSKGIG--RAMKVGK--- 244 (363)
T ss_pred CCCch----H---------HHHHcCCCEEEEeCCcccCCCc-eEEEEE-cHHHHHHHHh---ccCCCc--ceeccCH---
Confidence 86211 0 0112368999999999988887 776554 4433332111 111110 0011111
Q ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC-------eeEEEEecC--CCCHHHHHHHHHh
Q 009181 392 GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD-------MTIVAFGSD--VVDIFEVNDIMSS 462 (541)
Q Consensus 392 ~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-------~~~v~f~~~--~~~~~~l~~~l~~ 462 (541)
..++++.+++..+...+. +..+...++++++.+.|+++|++++..++. ...+.|... +.+..++.+.|.+
T Consensus 245 ~~~~gl~aAl~~~~~~~~-~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~ 323 (363)
T TIGR01437 245 ENILGLTAALEQYLSTGK-ESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQ 323 (363)
T ss_pred HHHHHHHHHHHHHHccCc-ccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhc
Confidence 235677788876643333 333444456778999999999999874321 234555542 4588999999998
Q ss_pred CC--ceeccC-CCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 009181 463 KG--WHLNPL-QRPNSIHICVTLQHVAVVDVFLRDLRES 498 (541)
Q Consensus 463 ~G--~~~~~~-~~~~~iRi~~~~~~~e~id~~i~~L~~~ 498 (541)
+| +....+ ...+.+|+++...+.+|+|.++++|+++
T Consensus 324 ~~~~I~~r~~~~~~~~~~l~~~~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 324 GEPAIYTRGYKANEGIIEIDPRSVTGGQLDIIVERIREI 362 (363)
T ss_pred CCCCEEEeeeeecCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence 77 333322 2346899988876779999999999876
No 78
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.92 E-value=4.6e-23 Score=214.13 Aligned_cols=304 Identities=14% Similarity=0.046 Sum_probs=216.8
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEc-CcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHH--HH
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMT-SGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK--AA 243 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t-~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~k--a~ 243 (541)
+.+.++..++++.+++++|.++.. ++ +++ ++||+++..++..+.. .++ ..++. ...|.+-.. ++
T Consensus 44 ~~f~~~~~~~r~~l~~l~~~~~~~---~v--~~~~gs~T~~~~~~~~~l~~----~~~---~~vi~-~g~f~~~~~~~~~ 110 (378)
T PRK03080 44 KPVKALLKRVIEGTRELLSLPEGY---EV--GIVPGSDTGAWEMALWSLLG----ARR---VDHLA-WESFGSKWATDVV 110 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCc---eE--EEECCchHHHHHHHHHhcCC----CCc---ceEEE-eCHHHHHHHHHHH
Confidence 466777888999999999996542 25 666 4899999999987631 112 34444 567777333 34
Q ss_pred hhcCC-eEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 244 QYFNI-KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 244 ~~~G~-~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
+..|+ +++.++.+.+..+|+++++ . +..|++++.+|.+|.+.|+++|++ +++|++++||++++.+..
T Consensus 111 ~~~g~~~v~~~~~~~g~~~d~~~i~----~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~----- 178 (378)
T PRK03080 111 KQLKLEDPRVLEADYGSLPDLSAVD----F-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFAL----- 178 (378)
T ss_pred hhcCCCCceEeccCCCCCCCHhhcC----C-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccC-----
Confidence 67899 9999998877778877743 2 556899999999999999999999 889999999999865554
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCcc---------CC-CcccCCC---
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLY---------VS-PTVAGSR--- 389 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~gsr--- 389 (541)
++|+. .+|++.+++|||+++|.|+|+++++++.+.+ .......|....+ .. ....++.
T Consensus 179 ------pidv~--~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp 249 (378)
T PRK03080 179 ------PLDWS--KLDVYTFSWQKVLGGEGGHGMAILSPRAVER-LESYTPARPIPKFFRLTKGGKAIENSFKGQTINTP 249 (378)
T ss_pred ------CCCHH--HCcEEEEehhhhCCCCCceEEEEECHHHHHh-hhcccCCCCCchhheeccchHHhhhhhcCCcccCc
Confidence 35544 3899999999999999999988887654322 1111111211000 00 0111222
Q ss_pred CCchHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHhhcCCCeEEecC-C---CeeEEEEecCC---CCHHHHHHHHH
Q 009181 390 PGGLIAGAWAALMSLGQE-GYLENTKAIMEVSESIQKGIKEIPELFIIGR-P---DMTIVAFGSDV---VDIFEVNDIMS 461 (541)
Q Consensus 390 ~~~~~a~~~~al~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~---~~~~v~f~~~~---~~~~~l~~~l~ 461 (541)
+-..+.++.++++.+... |++++.++..++++++++.|+++++++++.+ + ...+++|..++ ....++...+.
T Consensus 250 ~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~ 329 (378)
T PRK03080 250 SMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLL 329 (378)
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHH
Confidence 222345557799988887 8999999999999999999999977877642 2 23588888765 22234556666
Q ss_pred hCCceeccCC---CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 462 SKGWHLNPLQ---RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 462 ~~G~~~~~~~---~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
++|+.+..-+ .++.+|+|+..+++ +|++++++.|++++++++.
T Consensus 330 ~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 330 RENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred HcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 7776554211 24689999998888 9999999999999887664
No 79
>PLN00175 aminotransferase family protein; Provisional
Probab=99.92 E-value=5.3e-22 Score=208.60 Aligned_cols=321 Identities=13% Similarity=0.126 Sum_probs=224.7
Q ss_pred HHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC
Q 009181 147 LINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI 224 (541)
Q Consensus 147 ~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi 224 (541)
.+.+++...+.....+|....|..++++.+.+++.+.+|.+ +++ ++ ++|+|+++|+..++.++.+ +|
T Consensus 71 ~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~---~I--~vt~G~~~al~~~~~~l~~-----~g- 139 (413)
T PLN00175 71 FVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEK---EV--TVTSGCTEAIAATILGLIN-----PG- 139 (413)
T ss_pred HHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---CE--EEeCCHHHHHHHHHHHhCC-----CC-
Confidence 34444444333333456556778888888888998887864 332 25 8999999999999887753 67
Q ss_pred CCCeEEecCCccchHHHHHhhcCCeEEEeeCCC-CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHH
Q 009181 225 TRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELAL 300 (541)
Q Consensus 225 ~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~ 300 (541)
++|+++++.|+.+...++..|++++.|++++ ++.+|+++|++++++++++|++++|+||||.+.+ +++|+++|+
T Consensus 140 --d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~ 217 (413)
T PLN00175 140 --DEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCK 217 (413)
T ss_pred --CEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999974 6899999999999999999999999999999975 778999999
Q ss_pred HcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCc
Q 009181 301 SHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGL 379 (541)
Q Consensus 301 ~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~ 379 (541)
+|++++++|++|+.+... ....++..++ ...+..++..++.|.+. .+..+|+++.. +++........ .+.
T Consensus 218 ~~~~~ii~De~Y~~l~~~---~~~~s~~~~~-~~~~~vi~i~SfSK~~~~~G~RiG~~v~~-~~l~~~l~~~~-~~~--- 288 (413)
T PLN00175 218 ENDVLAFTDEVYDKLAFE---GDHISMASLP-GMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTWGVRQAH-SFL--- 288 (413)
T ss_pred HcCcEEEEecccCccccC---CcccChhhCC-CCcCcEEEEecchhhccCcchheeeeEeC-HHHHHHHHHHH-hhc---
Confidence 999999999999876541 1000010111 11234567778899843 44568987654 33332211110 000
Q ss_pred cCCCcccCCCCCchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecC--CC-CHH
Q 009181 380 YVSPTVAGSRPGGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSD--VV-DIF 454 (541)
Q Consensus 380 ~~~~~~~gsr~~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~--~~-~~~ 454 (541)
.. +.....++++...+ +...+++..+.+.++++.+.+.|++. ++++..+....+++++.. +. +..
T Consensus 289 ----~~-----~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~~f~~~~~~~~~~~~~~ 358 (413)
T PLN00175 289 ----TF-----ATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKVYPSSGTYFVMVDHTPFGFENDI 358 (413)
T ss_pred ----cC-----CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEeccccCCCCHH
Confidence 00 01122455555555 34557888888999999999999987 787664434445666653 22 467
Q ss_pred HHHHHHH-hCCceecc---C-----CCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 455 EVNDIMS-SKGWHLNP---L-----QRPNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 455 ~l~~~l~-~~G~~~~~---~-----~~~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
++.+.|. ++|+.+.+ + ...+++|+|++. ..+++++.+++|++.++
T Consensus 359 ~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~-~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 359 AFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK-DEETLRAAVERMKTKLK 412 (413)
T ss_pred HHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 8888876 56875542 1 123689999985 56999999999988764
No 80
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.91 E-value=5.7e-23 Score=211.37 Aligned_cols=281 Identities=20% Similarity=0.230 Sum_probs=208.4
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++++|+++++ + ++|+|+++++..+++++.+ +| ++|+++.+.|+.+...++..|++++.+|
T Consensus 58 ~lr~~ia~~~~~~~~~----i--~~~~G~~~~l~~~~~~l~~-----~g---d~v~~~~p~y~~~~~~~~~~g~~~~~~~ 123 (346)
T TIGR01141 58 ELKQALADYYGVDPEQ----I--LLGNGSDEIIELLIRAFLE-----PG---DAVLVPPPTYSMYEISAKIHGAEVVKVP 123 (346)
T ss_pred HHHHHHHHHhCcChHH----E--EEcCCHHHHHHHHHHHhcC-----CC---CEEEEcCCCHHHHHHHHHHcCCeEEEec
Confidence 5677888899987665 6 8999999999888877642 56 8999999999988889999999999999
Q ss_pred CCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHc--CCEEEEeCCcccchhhhhhhcCCCCCCCCc
Q 009181 255 VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH--GTCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~--~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~ 332 (541)
+++++.+|++++++++++++++|++++|+||+|.+.|++++.++|+.+ ++++++|++|+.+... +...+..+
T Consensus 124 ~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~-----~~~~~~~~- 197 (346)
T TIGR01141 124 LDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGE-----PSTLPLLA- 197 (346)
T ss_pred cCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCC-----ccHHHHHh-
Confidence 988899999999999988999999999999999999999999999987 9999999999754321 00000011
Q ss_pred CCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhH-HHHH
Q 009181 333 SVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ-EGYL 410 (541)
Q Consensus 333 ~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~-~g~~ 410 (541)
...-+++..+++|++ .++.++|+++. ++++..........|. ....++.++...+.. ..++
T Consensus 198 -~~~~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~~~ 260 (346)
T TIGR01141 198 -EYPNLIVLRTLSKAFGLAGLRIGYAIA-NAEIIDALNKVRAPFN---------------LSRLAQAAAIAALRDDDFIE 260 (346)
T ss_pred -hCCCEEEEehhhHhhhchhhhceeeec-CHHHHHHHHhccCCCC---------------CCHHHHHHHHHHhCCHHHHH
Confidence 112256677889994 23334898665 4444332211111111 012244444444433 2477
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCC----CCCeEEEEecCCCHH
Q 009181 411 ENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQ----RPNSIHICVTLQHVA 486 (541)
Q Consensus 411 ~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~----~~~~iRi~~~~~~~e 486 (541)
+..++..++++++.+.|++++++++. ++...++++.+++ +..++.+.|.++|+.+.... .++++|+|++ +.+
T Consensus 261 ~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~-~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~--~~~ 336 (346)
T TIGR01141 261 KTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR-DADALFEALLEKGIIVRDLNSYPGLPNCLRITVG--TRE 336 (346)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC-CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC--CHH
Confidence 88888999999999999988888854 4566788888765 78899999999998765421 1688999987 568
Q ss_pred HHHHHHHHHH
Q 009181 487 VVDVFLRDLR 496 (541)
Q Consensus 487 ~id~~i~~L~ 496 (541)
+++++++.|+
T Consensus 337 ~i~~~~~~l~ 346 (346)
T TIGR01141 337 ENDRFLAALR 346 (346)
T ss_pred HHHHHHHHhC
Confidence 9999988763
No 81
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=2.4e-23 Score=213.33 Aligned_cols=286 Identities=21% Similarity=0.236 Sum_probs=198.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHH---HHhhcCCe
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK---AAQYFNIK 249 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~k---a~~~~G~~ 249 (541)
..++++++++++| ++. + ++++|||+++..++.++.. +| ++|+++.+.|+++.. .+...|++
T Consensus 34 ~~~l~~~~a~~~g-~~~-----~--~~~~~gt~a~~~~~~~l~~-----~g---d~v~~~~~~~~~~~~~~~~~~~~g~~ 97 (338)
T cd06502 34 TAKLEARAAELFG-KEA-----A--LFVPSGTAANQLALAAHTQ-----PG---GSVICHETAHIYTDEAGAPEFLSGVK 97 (338)
T ss_pred HHHHHHHHHHHhC-CCe-----E--EEecCchHHHHHHHHHhcC-----CC---CeEEEecCcceeeecCCcHHHHcCce
Confidence 4456679999999 332 3 8899999999999888753 56 899999999988654 35568999
Q ss_pred EEEeeCCCCCccCHHHHHHhhcc-------CceEEEeecCCCCCcc--ccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 250 LWRVPVDKEFRADVKAIKKYINR-------NTVLIVGSAPGFPHGI--IDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 250 v~~v~~~~~~~~d~~~Le~~i~~-------~t~~vv~~~~~~~~G~--id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
++.++.+. +.+|+++|++++++ ++++|++++|+|+.|. .+++++|+++|++||+++|+|++|+.+..
T Consensus 98 ~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~--- 173 (338)
T cd06502 98 LLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAA--- 173 (338)
T ss_pred EEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHH---
Confidence 99999865 78999999999975 7899999999997443 45688999999999999999999854432
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHH
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~a 400 (541)
...|. .+.....++|+++.++||++..| | |++++.++++..........|.+. .+... ..++++
T Consensus 174 ~~~~~---~~~~~~~~~d~~~~s~sK~~~~~-~-g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--~~~~a~ 237 (338)
T cd06502 174 AALGV---ALKTYKSGVDSVSFCLSKGGGAP-V-GAVVVGNRDFIARARRRRKQAGGG---------MRQSG--FLAAAG 237 (338)
T ss_pred HhcCC---CHHHHHhcCCEEEEeccccCCCc-c-ceEEECCHHHHHHHHHHHHHhCCC---------hhhHH--HHHHHH
Confidence 11121 11112346789999999995444 4 335555665544322111111110 11111 244555
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCC--HHHHHHHHH---hCCceeccCCCCCe
Q 009181 401 LMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVD--IFEVNDIMS---SKGWHLNPLQRPNS 475 (541)
Q Consensus 401 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~--~~~l~~~l~---~~G~~~~~~~~~~~ 475 (541)
+..+...++.+..++..++++++.+.|+++ ++.+ .++..+++.+...... ..++.+.+. ++|+.+...+. +.
T Consensus 238 ~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~~~-~~ 314 (338)
T cd06502 238 LAALENDLWLRRLRHDHEMARRLAEALEEL-GGLE-SEVQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYAWGE-GG 314 (338)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCc-ccccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEecCC-Ce
Confidence 555655567788899999999999999988 4543 3556778877764321 224444443 67877655433 78
Q ss_pred EEEEecCCCH-HHHHHHHHHHHH
Q 009181 476 IHICVTLQHV-AVVDVFLRDLRE 497 (541)
Q Consensus 476 iRi~~~~~~~-e~id~~i~~L~~ 497 (541)
+|++++..++ +|++++++.+++
T Consensus 315 lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 315 VRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred EEEEeecCCCHHHHHHHHHHHhc
Confidence 9999998766 999999998865
No 82
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.91 E-value=8.5e-22 Score=207.93 Aligned_cols=314 Identities=14% Similarity=0.161 Sum_probs=216.8
Q ss_pred CcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH
Q 009181 162 HLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (541)
Q Consensus 162 ~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~ 239 (541)
.|....+..++++.+.+++....|. ++++ + ++|+|+++|+.+++.++.+ +| ++|+++.+.|+.+
T Consensus 89 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~----v--~it~G~~~al~l~~~~l~~-----~G---d~Vlv~~P~y~~y 154 (430)
T PLN00145 89 SYSTCVGLLPARRAIAEYLSRDLPYELSTDD----I--YLTAGCAQAIEIIMSVLAQ-----PG---ANILLPRPGYPLY 154 (430)
T ss_pred CCCCCccCHHHHHHHHHHHhhccCCCCChhh----E--EEeCCHHHHHHHHHHHhcC-----CC---CEEEEcCCCCccH
Confidence 3444556677777777777665554 3443 6 8999999999999998753 66 8999999999999
Q ss_pred HHHHhhcCCeEEEeeCC--CCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCccc
Q 009181 240 DKAAQYFNIKLWRVPVD--KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGG 314 (541)
Q Consensus 240 ~ka~~~~G~~v~~v~~~--~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg 314 (541)
...+...|++++.+++. +++.+|+++++++++++++++++++|+||||.+.+ +++|.++|+++|+++++|++|+.
T Consensus 155 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~ 234 (430)
T PLN00145 155 EARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDH 234 (430)
T ss_pred HHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchh
Confidence 99999999999999874 36899999999999999999999999999999988 78899999999999999999987
Q ss_pred chhhhhhhcCCCCCCCCcCCCCceEEEeCCCCC-CCCCCCceEEEEeccc-ccccc--cccccccCCCccCCCcccCCCC
Q 009181 315 FVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKY-GLAPKGTSVVLYRNRE-IRKHQ--FVAVTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 315 ~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~-~~~p~g~g~ll~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~gsr~ 390 (541)
+... .. .. .|...+....-.+...++.|. +..+..+||++..++. +.... ........ . . +.
T Consensus 235 ~~~~--~~-~~-~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~-----~--~-~~-- 300 (430)
T PLN00145 235 LTFG--SK-PF-VPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYL-----N--I-ST-- 300 (430)
T ss_pred hccC--CC-Cc-cchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHh-----c--c-cC--
Confidence 6531 10 00 111111111124556678898 4555569998875432 21110 00000000 0 0 00
Q ss_pred CchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-CeeEEEEecCC-----C-CHHHHHHHH
Q 009181 391 GGLIAGAWAALMSLG---QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-DMTIVAFGSDV-----V-DIFEVNDIM 460 (541)
Q Consensus 391 ~~~~a~~~~al~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~~v~f~~~~-----~-~~~~l~~~l 460 (541)
......+.++...+. .+.+++..+...+.++.+.+.|++++++.....| ...++++..+. . +..+++..|
T Consensus 301 ~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~l 380 (430)
T PLN00145 301 DPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKL 380 (430)
T ss_pred CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHH
Confidence 001224555444443 3567888889999999999999998888765444 45556665532 1 455666555
Q ss_pred H-hCCceecc---CCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHc
Q 009181 461 S-SKGWHLNP---LQRPNSIHICVTLQHVAVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 461 ~-~~G~~~~~---~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~~ 504 (541)
. +.|+.+.. ++.++++||+++. ..+++++.+++|+++++..++
T Consensus 381 l~~~gV~v~pG~~fg~~~~lRis~~~-~~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 381 AKEESVVVLPGSALGMKNWLRITFAI-DPPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred HHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhcc
Confidence 4 56765432 4567899999994 568899999999988876553
No 83
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.91 E-value=6.8e-22 Score=207.28 Aligned_cols=316 Identities=15% Similarity=0.161 Sum_probs=220.7
Q ss_pred HHHHHHHhhccc-CCCCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC
Q 009181 147 LINEACSMFAHT-NPLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (541)
Q Consensus 147 ~~~~~~~~~~~~-n~~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G 223 (541)
.+.+.+...+.. ..++|. .++..++.+.+.+++.+..|.+ +++ ++ ++|+|+++++.+++.++.+ +|
T Consensus 49 ~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~---~I--~it~G~~~al~~~~~~~~~-----~G 117 (399)
T PRK07681 49 FVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADK---EV--LLLMGSQDGLVHLPMVYAN-----PG 117 (399)
T ss_pred HHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCC---eE--EECCCcHHHHHHHHHHhCC-----CC
Confidence 344444443332 223332 3577778888888888777753 312 36 8999999999999988753 67
Q ss_pred CCCCeEEecCCccchHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHH
Q 009181 224 ITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGEL 298 (541)
Q Consensus 224 i~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~l 298 (541)
++|+++.++|+.+...++.+|++++.+|+++ ++.+|++++++++.+++++|++++|+||||.+.+ +++|.++
T Consensus 118 ---d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~ 194 (399)
T PRK07681 118 ---DIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAF 194 (399)
T ss_pred ---CEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHH
Confidence 9999999999999999999999999999975 4678999999999889999999999999999988 7789999
Q ss_pred HHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcC-CCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccc--cc
Q 009181 299 ALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS-VQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAV--TE 374 (541)
Q Consensus 299 a~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~-~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~--~~ 374 (541)
|++||+++++|++|+.+... .... .+..... .....++..+++|... .+..+|+++. ++++........ ..
T Consensus 195 a~~~~~~iI~De~y~~~~~~---~~~~-~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~-~~~l~~~~~~~~~~~~ 269 (399)
T PRK07681 195 AKKHNIIVVHDFAYAEFYFD---GNKP-ISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG-NEEIVRALTQFKSNTD 269 (399)
T ss_pred HHHcCeEEEEeccchhheeC---CCCC-CChhhCCCCcccEEEEeecccccCCccceeEEEec-CHHHHHHHHHHHhhcc
Confidence 99999999999999876531 1000 1101111 1123456668889842 4445898764 454443221111 01
Q ss_pred cCCCccCCCcccCCCCCchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-C
Q 009181 375 WSGGLYVSPTVAGSRPGGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-V 451 (541)
Q Consensus 375 ~~~~~~~~~~~~gsr~~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~ 451 (541)
|. .....+.++...+ +...+++..+...++++++.+.|++. ++++..+..+.++++++++ .
T Consensus 270 ~~---------------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~g~f~~~~l~~~~ 333 (399)
T PRK07681 270 YG---------------VFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWNVDKPAGSMFVWAEIPKGW 333 (399)
T ss_pred cC---------------CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeeEEEEECCCCC
Confidence 10 0122444444444 33456777777888889999999987 7876655566777777654 3
Q ss_pred CHHHHHHHHHh-CCceecc---CC--CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 009181 452 DIFEVNDIMSS-KGWHLNP---LQ--RPNSIHICVTLQHVAVVDVFLRDLRES 498 (541)
Q Consensus 452 ~~~~l~~~l~~-~G~~~~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~~~ 498 (541)
+..++.+.+.+ +|+.+.. ++ .++++|++++. +.+++++++++|+++
T Consensus 334 ~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 334 TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ-DEEVLQQAVENIRNS 385 (399)
T ss_pred CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 67788888877 7876543 22 24689999983 569999999999883
No 84
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=5.4e-22 Score=204.44 Aligned_cols=282 Identities=15% Similarity=0.125 Sum_probs=211.2
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.++++++.++++ + ++|+|+++++..++.++.+ +| ++|+++.+.|+.+..+++..|++++.++
T Consensus 63 ~lr~~ia~~~~~~~~~----i--~it~G~~~~l~~~~~~l~~-----~g---d~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 128 (351)
T PRK14807 63 KLREELARYCSVVPTN----I--FVGNGSDEIIHLIMLAFIN-----KG---DVVIYPHPSFAMYSVYSKIAGAVEIPVK 128 (351)
T ss_pred HHHHHHHHHhCCCccc----E--EEecCHHHHHHHHHHHhcC-----CC---CEEEEeCCChHHHHHHHHHcCCeEEEee
Confidence 4666778888888765 6 8999999999998888743 67 8999999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhhcc-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcC
Q 009181 255 VDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS 333 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~ 333 (541)
+++++.+|++++++++++ ++++|++++|+||||.+.+.+++.++|++++.++++|++|+.+.- .. . .+..+
T Consensus 129 ~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~----~~-~-~~~~~-- 200 (351)
T PRK14807 129 LKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYG----NT-I-VDVIN-- 200 (351)
T ss_pred cCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcc----cc-h-HHHhh--
Confidence 988889999999999975 899999999999999999999999999999999999999976421 00 0 01111
Q ss_pred CCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHH
Q 009181 334 VQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLEN 412 (541)
Q Consensus 334 ~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~ 412 (541)
...-.++..+++|... .+..+|+++. ++++..........|. ....++.++...+....+++.
T Consensus 201 ~~~~vi~~~S~SK~~~~~GlRiG~~v~-~~~~~~~~~~~~~~~~---------------~~~~~q~~~~~~l~~~~~~~~ 264 (351)
T PRK14807 201 EFENLIVLRTLSKAFGLAGLRVGYAVA-NENILKYLNLVKSPYN---------------INSLSQVIALKVLRTGVLKER 264 (351)
T ss_pred hCCCEEEEecchHhcccchhceeeeec-CHHHHHHHHHccCCCC---------------cCHHHHHHHHHHHhHHHHHHH
Confidence 1123567778899942 5556898664 4444332211111111 012356666666655567788
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccC----CCCCeEEEEecCCCHHHH
Q 009181 413 TKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPL----QRPNSIHICVTLQHVAVV 488 (541)
Q Consensus 413 ~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~----~~~~~iRi~~~~~~~e~i 488 (541)
.++..+.++++.+.|++.+++.+. ++..+++++++. +..++.+.|.++|+.+... +.++++|++++. .++.
T Consensus 265 ~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~--~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~~--~~~~ 339 (351)
T PRK14807 265 VNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFK--DADYVYQGLLERGILVRDFSKVEGLEGALRITVSS--CEAN 339 (351)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcC--CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcCC--HHHH
Confidence 888888899999999888888764 566677777765 5678899999999776443 235789999984 5778
Q ss_pred HHHHHHHHHHH
Q 009181 489 DVFLRDLRESV 499 (541)
Q Consensus 489 d~~i~~L~~~~ 499 (541)
++|++.|++++
T Consensus 340 ~~l~~~l~~~~ 350 (351)
T PRK14807 340 DYLINGLKELL 350 (351)
T ss_pred HHHHHHHHHhh
Confidence 89999988753
No 85
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.91 E-value=7.9e-22 Score=207.56 Aligned_cols=324 Identities=15% Similarity=0.099 Sum_probs=223.2
Q ss_pred HHHHHHHHhhccc-CCCCcccchHHHHHHHHHHHHHHHHhC--------CCCCCCCCccceEEcCcHHHHHHHHHHHHHH
Q 009181 146 SLINEACSMFAHT-NPLHLDIFQSVARFEAEVIAMTAALLG--------NKEKASGGQVCGNMTSGGTESILLAVKSSRD 216 (541)
Q Consensus 146 ~~~~~~~~~~~~~-n~~~~~~~~~~~~~e~ev~~~la~l~g--------~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~ 216 (541)
+.+.+++...+.. ...+|....+..++.+.+.+++.+.++ +++++ + ++|+|+++++.+++.++.+
T Consensus 53 ~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~----i--~it~G~~~al~~~~~~~~~ 126 (412)
T PTZ00433 53 AIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDN----V--VLCSGVSHAILMALTALCD 126 (412)
T ss_pred HHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhh----E--EEeCChHHHHHHHHHHhcC
Confidence 3444444443332 223454445667777777777776543 44444 6 8999999999999998753
Q ss_pred HHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---
Q 009181 217 YMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP--- 291 (541)
Q Consensus 217 ~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~--- 291 (541)
+| ++|+++.++|+.+...++..|++++.+|+++ ++.+|+++|++++++++++|++++|+||||.+.+
T Consensus 127 -----~g---d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~ 198 (412)
T PTZ00433 127 -----EG---DNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKH 198 (412)
T ss_pred -----CC---CEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHH
Confidence 66 8999999999999999999999999999864 6789999999999989999999999999998765
Q ss_pred HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCC-CCCCCceEEEEecc-----ccc
Q 009181 292 IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYG-LAPKGTSVVLYRNR-----EIR 365 (541)
Q Consensus 292 i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~-----~~~ 365 (541)
+++|+++|++||+++++|++|..+... ...-..+..++. ..-.++..++.|.. ..+..+|+++..++ ++.
T Consensus 199 ~~~l~~~a~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~--~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~ 274 (412)
T PTZ00433 199 VEDIIRLCEELRLPLISDEIYAGMVFN--GATFTSVADFDT--TVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFL 274 (412)
T ss_pred HHHHHHHHHHcCCeEEEeccccccccC--CCCccchhhccC--CCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHH
Confidence 778899999999999999999876531 100000111111 11135667889984 56677999887432 122
Q ss_pred cccccccc-ccCCCccCCCcccCCCCCchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCe
Q 009181 366 KHQFVAVT-EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG---QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDM 441 (541)
Q Consensus 366 ~~~~~~~~-~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~ 441 (541)
........ .|. .....+.++...+. ...+++..+++.+.++.+.+.|++..++.+..+...
T Consensus 275 ~~~~~~~~~~~~---------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg 339 (412)
T PTZ00433 275 DGMKRLGMLVCG---------------PCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGS 339 (412)
T ss_pred HHHHHHhhccCC---------------CChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCee
Confidence 11100000 010 01224444444442 355777778888889999999988667765544445
Q ss_pred eEEEEecCC------CCHHHHHHHHH-hCCceecc---CCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 442 TIVAFGSDV------VDIFEVNDIMS-SKGWHLNP---LQRPNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 442 ~~v~f~~~~------~~~~~l~~~l~-~~G~~~~~---~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
.+++++.+. .+..++.+.|. ++|+.+.. ++.++++|+|++. ..+++++.+++|.++++..+
T Consensus 340 ~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 340 MFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR-PVEVLREAVERIKAFCERHK 410 (412)
T ss_pred EEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhc
Confidence 666766643 25678888887 47876543 3446899999985 46889999999999887544
No 86
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.91 E-value=2.5e-21 Score=203.44 Aligned_cols=327 Identities=13% Similarity=0.143 Sum_probs=225.1
Q ss_pred HHHHHHHHhhcccC-CCCcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhc
Q 009181 146 SLINEACSMFAHTN-PLHLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKR 222 (541)
Q Consensus 146 ~~~~~~~~~~~~~n-~~~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~ 222 (541)
..+.+++...+... ..+|....+..++.+.+.+++.+.+|. ++++ + ++|+|+++++.+++.++.+ +
T Consensus 52 ~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~----I--~it~G~~~al~~~~~~l~~-----~ 120 (409)
T PLN00143 52 NIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDD----V--YLTLGCKHAAEIIIKVLAR-----P 120 (409)
T ss_pred HHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhh----E--EEecChHHHHHHHHHHHcC-----C
Confidence 33444444433332 233544567777888788888776654 4443 6 8999999999999998864 6
Q ss_pred CCCCCeEEecCCccchHHHHHhhcCCeEEEeeCC--CCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHH
Q 009181 223 GITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD--KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGE 297 (541)
Q Consensus 223 Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~--~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~ 297 (541)
| ++|+++.+.|+.+...++..|++++.++++ +++.+|+++|++++++++..+++++|+||||.+.+ +++|.+
T Consensus 121 g---d~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~ 197 (409)
T PLN00143 121 E---ANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAE 197 (409)
T ss_pred C---CEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHH
Confidence 7 899999999999999999999999999985 36789999999999889999999999999999987 778889
Q ss_pred HHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCC-cCCCCceEEEeCCCCC-CCCCCCceEEEEeccc-cccc-----cc
Q 009181 298 LALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD-FSVQGVTSISVDVHKY-GLAPKGTSVVLYRNRE-IRKH-----QF 369 (541)
Q Consensus 298 la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~-~~~~gvdsis~~~hK~-~~~p~g~g~ll~~~~~-~~~~-----~~ 369 (541)
+|++|++++++|++|..+.. . +...+++. +....-.++..++.|. +.++..+|+++..+++ +.+. .+
T Consensus 198 ~a~~~~~~ii~De~Y~~l~~---~--~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~ 272 (409)
T PLN00143 198 TARKLGILVIADEVYGHIVF---G--SKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSI 272 (409)
T ss_pred HHHHcCCeEEEEcccccccc---C--CCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHH
Confidence 99999999999999987653 1 10011111 1111124566788999 6666779998775442 2111 00
Q ss_pred ccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC-eeEEE
Q 009181 370 VAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG---QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD-MTIVA 445 (541)
Q Consensus 370 ~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-~~~v~ 445 (541)
..... +....+ ...+.++...+. ...+++..+++.+..+++.+.|+++++.....+|. ..+++
T Consensus 273 ~~~~~--------~~~~~~-----~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w 339 (409)
T PLN00143 273 KKALN--------PAPFPP-----TFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFAL 339 (409)
T ss_pred HHHHh--------ccCCCC-----chHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEE
Confidence 00000 000000 124444444442 45678888889899999999998876544343444 55667
Q ss_pred EecCC-----C-CHHHHHH-HHHhCCceecc---CCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHcC
Q 009181 446 FGSDV-----V-DIFEVND-IMSSKGWHLNP---LQRPNSIHICVTLQHVAVVDVFLRDLRESVETVKQN 505 (541)
Q Consensus 446 f~~~~-----~-~~~~l~~-~l~~~G~~~~~---~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~~~ 505 (541)
++++. . +..++.. .+.++|+.+.. ++.++++|+|++. +.+++++.+++|+++++...+.
T Consensus 340 ~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~-~~~~l~~al~rl~~~l~~~~~~ 408 (409)
T PLN00143 340 VKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV-EQSSLEDGLGRLKSFCGRHAKK 408 (409)
T ss_pred EecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHHhccC
Confidence 77642 1 3455554 55778876543 3456899999984 4689999999999988765544
No 87
>PLN02656 tyrosine transaminase
Probab=99.91 E-value=6.9e-22 Score=207.76 Aligned_cols=323 Identities=16% Similarity=0.150 Sum_probs=223.3
Q ss_pred HHHHHHHHhhcccCC-CCcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhc
Q 009181 146 SLINEACSMFAHTNP-LHLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKR 222 (541)
Q Consensus 146 ~~~~~~~~~~~~~n~-~~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~ 222 (541)
+.+.+++.+.+..+. ..|....+..++++.+.+++....|. ++++ + ++|+|+++++.+++.++.+ +
T Consensus 51 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~----i--~~t~G~~~al~~~~~~l~~-----~ 119 (409)
T PLN02656 51 HVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDD----V--FITSGCTQAIDVALSMLAR-----P 119 (409)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCccc----E--EEeCChHHHHHHHHHHHhC-----C
Confidence 444455544444332 34555567778888788888776664 3443 6 8999999999999988753 6
Q ss_pred CCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCcccc---CHHHHHH
Q 009181 223 GITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIID---PIQELGE 297 (541)
Q Consensus 223 Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id---~i~~I~~ 297 (541)
| ++|+++++.|+.+...++..|++++.+|+++ ++.+|+++++++++++++++++++|+||||.+. ++++|++
T Consensus 120 g---d~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~ 196 (409)
T PLN02656 120 G---ANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAE 196 (409)
T ss_pred C---CeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCHHHHHHHHH
Confidence 6 8999999999999999999999999999853 578999999999999999999999999999995 5889999
Q ss_pred HHHHcCCEEEEeCCcccchhhhhhhcCCCCCCC-CcCCCCceEEEeCCCCC-CCCCCCceEEEEecc-------cccccc
Q 009181 298 LALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF-DFSVQGVTSISVDVHKY-GLAPKGTSVVLYRNR-------EIRKHQ 368 (541)
Q Consensus 298 la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~-~~~~~gvdsis~~~hK~-~~~p~g~g~ll~~~~-------~~~~~~ 368 (541)
+|++|++++++|++|+.+... . ...+++ .+....-.++..++.|. +..+..+|+++..++ ++....
T Consensus 197 ~a~~~~~~ii~De~y~~~~~~--~---~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~ 271 (409)
T PLN02656 197 TAEKLKILVIADEVYGHLAFG--S---NPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERI 271 (409)
T ss_pred HHHHcCCEEEEehhhhhcccC--C---CCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHH
Confidence 999999999999999876531 1 000111 11111124556688898 666677999887542 222211
Q ss_pred cccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCe-eEE
Q 009181 369 FVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG---QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDM-TIV 444 (541)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~-~~v 444 (541)
......+ + +.....+.++...+. ...+++..+...++++.+.+.|++++++....+|.. .++
T Consensus 272 ~~~~~~~-----------~---~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~ 337 (409)
T PLN02656 272 KKYFDIL-----------G---GPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAV 337 (409)
T ss_pred HHHHhhh-----------c---CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEE
Confidence 1000000 0 001225555555553 346778888888889999999998766543334554 455
Q ss_pred EEecCC-----C-CHHH-HHHHHHhCCceecc---CCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 445 AFGSDV-----V-DIFE-VNDIMSSKGWHLNP---LQRPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 445 ~f~~~~-----~-~~~~-l~~~l~~~G~~~~~---~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
+++.+. . +..+ +...+.++|+.+.. ++.++++|+|++. +.+++++.+++|++++...
T Consensus 338 w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~-~~e~l~eal~rl~~~~~~~ 404 (409)
T PLN02656 338 MVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA-DPSSLEEALGRIKSFYLRH 404 (409)
T ss_pred EEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHh
Confidence 655531 1 2334 44677788876543 3456899999995 6689999999999887643
No 88
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.91 E-value=3.7e-23 Score=213.12 Aligned_cols=301 Identities=15% Similarity=0.063 Sum_probs=210.2
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCc-HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhh
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSG-GTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY 245 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~G-gt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~ 245 (541)
+.+.++..++++.+++++|.+.++ ++ ++|+| +|+|+.+++..+.. ..++| ++|+.....|.+ .+.++.
T Consensus 40 ~~~~~~~~~~r~~l~~l~~~~~~~---~v--vf~~gs~T~a~~~~~~~l~~--~~~~~---~~i~~g~~~~~~-~~~a~~ 108 (355)
T cd00611 40 KDFEAIVNEAESDLRELLNIPDNY---KV--LFLQGGATGQFAAVPLNLLG--DKGTA---DYVVTGAWSAKA-AKEAKR 108 (355)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCc---eE--EEEcCCchHHHHHHHHhcCC--CCCeE---EEEECCHHHHHH-HHHHHh
Confidence 556677788999999999985443 25 88888 99999999998732 11233 556554333333 346677
Q ss_pred cCCeEEEeeCCCCCcc-C-HHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhc
Q 009181 246 FNIKLWRVPVDKEFRA-D-VKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (541)
Q Consensus 246 ~G~~v~~v~~~~~~~~-d-~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~ 323 (541)
.|++++.++.++++.. + ++..+..+++++.+|++++.+|.+|... . ++++.||+.++||+++..+..
T Consensus 109 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~--~---~i~~~~g~~~~VDa~qs~g~~------ 177 (355)
T cd00611 109 YGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEF--D---EVPDTGGVPLVADMSSNILSR------ 177 (355)
T ss_pred cCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEc--c---eecccCCCeEEEEccccccCC------
Confidence 8999999998765433 4 4444456778899999999999999972 2 455569999999999765554
Q ss_pred CCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccc--cccccCCCccCCCcccCCCCCchHHHHHHHH
Q 009181 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFV--AVTEWSGGLYVSPTVAGSRPGGLIAGAWAAL 401 (541)
Q Consensus 324 g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al 401 (541)
++|+...++ ...++||+ +||.|+|+++++++.+.+..-. ...+|.. ........|+.+-..++++.+++
T Consensus 178 -----~idv~~~~~--~~ss~~K~-lGP~G~g~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Tpn~~~i~~L~aal 248 (355)
T cd00611 178 -----PIDVSKFGV--IYAGAQKN-LGPAGVTVVIVRKDLLGKARKITPSMLNYKT-HADNNSLYNTPPTFAIYMMGLVL 248 (355)
T ss_pred -----CCCHHHhCE--EEeecccc-cCCCceEEEEECHHHHhhcccCCCCcccHHH-HHhcCCCCCCChHHHHHHHHHHH
Confidence 355555554 44568997 6899999888876544221100 0001100 00011124555556688999999
Q ss_pred HHHhHH-HHHHHHHHHHHHHHHHHHHhhcCCCeE-EecCC--Ce-eEEEEecCCC-CHHHHHHHHHhCCceeccC-CCCC
Q 009181 402 MSLGQE-GYLENTKAIMEVSESIQKGIKEIPELF-IIGRP--DM-TIVAFGSDVV-DIFEVNDIMSSKGWHLNPL-QRPN 474 (541)
Q Consensus 402 ~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~-v~~~~--~~-~~v~f~~~~~-~~~~l~~~l~~~G~~~~~~-~~~~ 474 (541)
+++..+ |++++.++..++++++.+.|+++||+. ...++ .. .+++|..++. ...++.+.+.++|.+.... +..+
T Consensus 249 ~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~~~g 328 (355)
T cd00611 249 KWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHRSVG 328 (355)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCcccC
Confidence 999888 799999999999999999999998863 21111 23 5689987763 1245556788899873332 2247
Q ss_pred eEEEEecCCCH-HHHHHHHHHHHHH
Q 009181 475 SIHICVTLQHV-AVVDVFLRDLRES 498 (541)
Q Consensus 475 ~iRi~~~~~~~-e~id~~i~~L~~~ 498 (541)
.+|+|+..+++ +|||+|++.|+++
T Consensus 329 ~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 329 GIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred eEEEEccCCCCHHHHHHHHHHHHHH
Confidence 89999998888 9999999999885
No 89
>PRK07324 transaminase; Validated
Probab=99.91 E-value=8.6e-22 Score=204.47 Aligned_cols=304 Identities=14% Similarity=0.124 Sum_probs=210.2
Q ss_pred cccCCCCcccchHHHHHHHHHHHHHHHHhC-CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCC
Q 009181 156 AHTNPLHLDIFQSVARFEAEVIAMTAALLG-NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVS 234 (541)
Q Consensus 156 ~~~n~~~~~~~~~~~~~e~ev~~~la~l~g-~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~ 234 (541)
.....++|....|..++++ .++++++ .++++ + ++|+|+++++.+++.++.+ +| ++|+++.+
T Consensus 51 ~~~~~~~Y~~~~G~~~lr~----~ia~~~~~~~~~~----v--i~t~G~~~al~~~~~~l~~-----~g---d~Vl~~~P 112 (373)
T PRK07324 51 LGQKKLTYGWIEGSPEFKE----AVASLYQNVKPEN----I--LQTNGATGANFLVLYALVE-----PG---DHVISVYP 112 (373)
T ss_pred HhcCCccCCCCCCCHHHHH----HHHHHhcCCChhh----E--EEcCChHHHHHHHHHHhCC-----CC---CEEEEcCC
Confidence 3444455555556665555 5555553 55554 6 8999999999999988753 66 89999999
Q ss_pred ccchHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEe
Q 009181 235 AHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVD 309 (541)
Q Consensus 235 ~h~s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD 309 (541)
+|..+...++..|++++.+|+++ ++.+|+++++++++++|+++++++|+||||.+.+ +++|+++|++||+++++|
T Consensus 113 ~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~D 192 (373)
T PRK07324 113 TYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSD 192 (373)
T ss_pred CchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 99999999999999999999975 4678999999999999999999999999999988 889999999999999999
Q ss_pred CCcccchhhhhhhcCCCCCC-CCcCCCCceEEEeCCCCCCCC--CCCceEEEEecccccccccccccccCCCccCCCccc
Q 009181 310 LCLGGFVLPFAKKLGYPIPP-FDFSVQGVTSISVDVHKYGLA--PKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVA 386 (541)
Q Consensus 310 ~a~gg~~~~f~~~~g~~~p~-~~~~~~gvdsis~~~hK~~~~--p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (541)
++|..+... +. .+. .+. ..-.+...++.|. ++ +..+|+++. ++++......... +. +..
T Consensus 193 e~y~~l~~~-----~~-~~s~~~~--~~~~I~~~s~SK~-~~~~G~RiG~i~~-~~~li~~~~~~~~-~~-------~~~ 254 (373)
T PRK07324 193 EVYRPLDED-----GS-TPSIADL--YEKGISTNSMSKT-YSLPGIRVGWIAA-NEEVIDILRKYRD-YT-------MIC 254 (373)
T ss_pred ccccccccC-----CC-CCChhhc--cCCEEEEecchhh-cCCccceeEEEec-CHHHHHHHHHHhC-cE-------Eec
Confidence 999765431 00 111 111 1113455678898 44 444798766 4544432211111 00 011
Q ss_pred CCCCCchHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecC-CCCHHHHHHHHH-h
Q 009181 387 GSRPGGLIAGAWAALMSLG--QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSD-VVDIFEVNDIMS-S 462 (541)
Q Consensus 387 gsr~~~~~a~~~~al~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~-~~~~~~l~~~l~-~ 462 (541)
.+ ...++++...+. ..-+++..+...++++.+.+.|++.+++....+.....+++..+ +.+..+++++|. +
T Consensus 255 ~~-----~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~~~~~~~~~ll~~ 329 (373)
T PRK07324 255 AG-----VFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDMPSEDFCLKLLKE 329 (373)
T ss_pred CC-----hHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCCCHHHHHHHHHHh
Confidence 11 224555544442 23455666666777888889898887887765544344444443 246778888865 6
Q ss_pred CCceecc---CCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 463 KGWHLNP---LQRPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 463 ~G~~~~~---~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
.|+.+.. ++.++++|+|++. +.+.+++.+++|++++++
T Consensus 330 ~gv~v~pg~~F~~~~~iRis~~~-~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 330 TGVLLVPGNRFDLEGHVRIGYCC-DTETLKKGLKKLSEFLRE 370 (373)
T ss_pred cCEEEECccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 6865533 3456899999985 468889999998888764
No 90
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.91 E-value=1.2e-21 Score=201.92 Aligned_cols=305 Identities=14% Similarity=0.094 Sum_probs=210.9
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
..|....+..++++.+.+++.+.+|.+ +++ ++ ++|+|+++++..++.++.+ +|-..++|+++.+.|+.
T Consensus 30 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---~I--iit~Gs~~ai~~~~~~~~~-----~g~~~d~Vl~~~p~y~~ 99 (350)
T TIGR03537 30 SQYPSALGTKALREAISGWFERRFGVKLDPDA---QV--LPSAGSKEAIFHFPLVFID-----PEEDRRRVIFGTPGYPV 99 (350)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---cE--EEcCChHHHHHHHHHHHcC-----CCCCCceEEEcCCCCcc
Confidence 445545667788888888888887854 431 36 8999999999998887753 33112689999999999
Q ss_pred HHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcc
Q 009181 239 YDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~g 313 (541)
+..+++..|++++.+++++ ++.+|+++++++++++++++++++|+||||.+.| +++|+++|++||+++++|++|+
T Consensus 100 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~ 179 (350)
T TIGR03537 100 YERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYT 179 (350)
T ss_pred hHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEecccc
Confidence 9999999999999999963 5679999999999999999999999999999988 8899999999999999999998
Q ss_pred cchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCc
Q 009181 314 GFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG 392 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~ 392 (541)
.+... .. .+.+......-.++..+++|.. ..+..+|+++ .++.+..........|.. +.+
T Consensus 180 ~~~~~---~~---~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~-~~~~~~~~~~~~~~~~~~----------~~~-- 240 (350)
T TIGR03537 180 EIYFG---EP---PHSALEVGIENVLAFHSLSKRSGMTGYRSGFVA-GDEKLISFLRKLRANFGV----------ASP-- 240 (350)
T ss_pred ccccC---CC---CCchhhcCcCCEEEEeecccccCCccccceeee-cCHHHHHHHHHHHHhhcc----------CCC--
Confidence 65331 10 1111100112246666889983 3344488765 444443322211111110 000
Q ss_pred hHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-CCHHHHHHHHHhCCceecc-
Q 009181 393 LIAGAWAALMSL-GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-VDIFEVNDIMSSKGWHLNP- 469 (541)
Q Consensus 393 ~~a~~~~al~~l-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~~~~~l~~~l~~~G~~~~~- 469 (541)
...+.++...+ ..+..++..+++.++.+.+.+.|++. ++++..+....++++..++ .+..++.+.|.++|+.+..
T Consensus 241 -~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~~~g~~~~~~~~~~~~~~~~l~~~L~~~gv~v~~g 318 (350)
T TIGR03537 241 -DFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATFYLWVKVPSGIDAKDYALRLLENGIVVAPG 318 (350)
T ss_pred -HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeEEEEEEECCCCCCHHHHHHHHHHCCEEEcCc
Confidence 11222222222 23456677788888888999999887 7775533334456677654 3778999999999977643
Q ss_pred --CC--CCCeEEEEecCCCHHHHHHHHHHHHH
Q 009181 470 --LQ--RPNSIHICVTLQHVAVVDVFLRDLRE 497 (541)
Q Consensus 470 --~~--~~~~iRi~~~~~~~e~id~~i~~L~~ 497 (541)
++ .++++|+++. .+.+++++.++++++
T Consensus 319 ~~f~~~~~~~~Ri~~~-~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 319 ENFGSGEEGYVRVALV-PTLEECEEALRLWER 349 (350)
T ss_pred hhhCCCCCCEEEEEec-CCHHHHHHHHHHHhc
Confidence 22 2478999986 355888888887764
No 91
>PRK08912 hypothetical protein; Provisional
Probab=99.91 E-value=1.2e-21 Score=204.76 Aligned_cols=306 Identities=15% Similarity=0.125 Sum_probs=214.5
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
.+|....+..++.+.+.+++.+.+|.+ ++. ++ ++|+|+++++..++.+..+ +| ++|+++.+.|+.
T Consensus 57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~---~i--~~t~G~~~al~~~~~~~~~-----~g---d~Vlv~~p~y~~ 123 (387)
T PRK08912 57 NQYPPMMGLPELRQAVAAHYARFQGLDLDPET---EV--MVTSGATEALAAALLALVE-----PG---DEVVLFQPLYDA 123 (387)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcc---cE--EEeCCcHHHHHHHHHHhcC-----CC---CEEEEeCCCchh
Confidence 445555667788888888888877753 431 26 8999999999888887643 66 899999999999
Q ss_pred HHHHHhhcCCeEEEeeCCC-CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCccc
Q 009181 239 YDKAAQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGG 314 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg 314 (541)
+...++.+|++++.+|+++ ++.+|+++++++++++++++++++|+||||.+.+ +++|.++|++|++++++|++|+.
T Consensus 124 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~ 203 (387)
T PRK08912 124 YLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEH 203 (387)
T ss_pred hHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhh
Confidence 9999999999999999975 7889999999999989999999999999999977 67799999999999999999986
Q ss_pred chhhhhhhcCCCCCCCCc-CCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCC
Q 009181 315 FVLPFAKKLGYPIPPFDF-SVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG 391 (541)
Q Consensus 315 ~~~~f~~~~g~~~p~~~~-~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~ 391 (541)
+... .... .+-... ...+.+++..+++|. ++..| +|+++.. +++..........+..+ .+
T Consensus 204 ~~~~---~~~~-~~~~~~~~~~~~~i~~~S~SK~-~g~~GlRiG~~~~~-~~~~~~l~~~~~~~~~~--------~~--- 266 (387)
T PRK08912 204 VVFD---GRRH-IPLMTLPGMRERTVKIGSAGKI-FSLTGWKVGFVCAA-PPLLRVLAKAHQFLTFT--------TP--- 266 (387)
T ss_pred cccC---CCCC-cChhhCCCccCceEEEeechhh-ccCcCceeEEEecC-HHHHHHHHHHHhhcccc--------CC---
Confidence 5431 1010 111111 112346788899998 55454 8987664 33332211111110000 00
Q ss_pred chHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC----CCHHHHHHHHH-hCC
Q 009181 392 GLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV----VDIFEVNDIMS-SKG 464 (541)
Q Consensus 392 ~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~----~~~~~l~~~l~-~~G 464 (541)
...+.++...+ ..+.+++..++..++++++.+.|++. ++++..+....++++.+++ .+..++.+.|. ++|
T Consensus 267 --~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~g 343 (387)
T PRK08912 267 --PNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAG 343 (387)
T ss_pred --hHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCC
Confidence 00122222222 23456777888888999999999987 7776644444566666653 36778888875 578
Q ss_pred ceecc---C----CCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 465 WHLNP---L----QRPNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 465 ~~~~~---~----~~~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
+.+.. + +.++++|+|++. ..+++++.+++|++.++
T Consensus 344 V~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 344 VAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAARR 385 (387)
T ss_pred EEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 75543 1 124799999996 46888888888887664
No 92
>PLN02187 rooty/superroot1
Probab=99.91 E-value=1.9e-21 Score=206.75 Aligned_cols=315 Identities=14% Similarity=0.148 Sum_probs=219.7
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
..|...++..++.+.+.+++.+.+|. ++++ | ++|+|+++++.+++.++.+ +| ++|+++.+.|+.
T Consensus 102 ~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~----I--~it~G~~~al~~~~~~l~~-----pG---d~Vlv~~P~y~~ 167 (462)
T PLN02187 102 NSYGPGAGILPARRAVADYMNRDLPHKLTPED----I--FLTAGCNQGIEIVFESLAR-----PN---ANILLPRPGFPH 167 (462)
T ss_pred CCCCCCCChHHHHHHHHHHHHHhcCCCCCccc----E--EEeCCHHHHHHHHHHHhcC-----CC---CEEEEeCCCCcc
Confidence 34545667777888788888776554 4554 6 8999999999999998864 77 999999999999
Q ss_pred HHHHHhhcCCeEEEeeCC--CCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcc
Q 009181 239 YDKAAQYFNIKLWRVPVD--KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~--~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~g 313 (541)
+...++..|++++.++.. +++.+|+++|++++++++.++++++|+||||.+.+ +++|+++|++||+++++|++|+
T Consensus 168 y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~ 247 (462)
T PLN02187 168 YDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYD 247 (462)
T ss_pred HHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEecccc
Confidence 999999999999999985 46899999999999999999999999999999977 7889999999999999999998
Q ss_pred cchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCC-CCCCCCceEEEEeccccc----ccccccccccCCCccCCCcccCC
Q 009181 314 GFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKY-GLAPKGTSVVLYRNREIR----KHQFVAVTEWSGGLYVSPTVAGS 388 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~-~~~p~g~g~ll~~~~~~~----~~~~~~~~~~~~~~~~~~~~~gs 388 (541)
.+.+. .. .+ .+-..+....-.++..++.|. +.++..+|+++..+++.+ .........|... +
T Consensus 248 ~l~f~--~~-~~-~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~---------~ 314 (462)
T PLN02187 248 RTIFG--DN-PF-VSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVT---------P 314 (462)
T ss_pred ccccC--CC-Cc-eeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhcccc---------C
Confidence 76541 00 00 000011111113555688899 556666999887554311 1111111111100 0
Q ss_pred CCCchHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC-eeEEEEecCC-----C-CHHHHHH
Q 009181 389 RPGGLIAGAWAALMSL---GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD-MTIVAFGSDV-----V-DIFEVND 458 (541)
Q Consensus 389 r~~~~~a~~~~al~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-~~~v~f~~~~-----~-~~~~l~~ 458 (541)
+.....++++...+ ..+.+++..+.+.+.++++.+.|++++++.....|. ..+++++.+. . +..++..
T Consensus 315 --~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~ 392 (462)
T PLN02187 315 --DPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCV 392 (462)
T ss_pred --CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHH
Confidence 00122444444444 245678888888999999999999886554333444 4566665431 1 3445544
Q ss_pred -HHHhCCceecc---CCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHcC
Q 009181 459 -IMSSKGWHLNP---LQRPNSIHICVTLQHVAVVDVFLRDLRESVETVKQN 505 (541)
Q Consensus 459 -~l~~~G~~~~~---~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~~~ 505 (541)
.+.++|+.+.. ++.++++||+++. ..+.+++.+++|+++++...+.
T Consensus 393 ~ll~~~gV~v~pG~~fg~~~~iRis~~~-~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 393 KLAREENLVFLPGDALGLKNWMRITIGV-EAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred HHHhhCCEEEECccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhhhc
Confidence 45778876542 3556899999985 4688999999999998766643
No 93
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.2e-21 Score=205.59 Aligned_cols=303 Identities=14% Similarity=0.153 Sum_probs=216.1
Q ss_pred hHHHHHHHHHHHHHHHHhCCC---CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHH
Q 009181 167 QSVARFEAEVIAMTAALLGNK---EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA 243 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~---~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~ 243 (541)
++...+.+.+.+++.+.+|.+ +++ +| ++|+|+++++..++.++.+ +| ++|+++.+.|+.+...+
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~~~~---~I--~it~Gs~~al~~~~~~~~~-----~g---d~Vlv~~P~y~~~~~~~ 147 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDIDPVT---EV--IHSIGSKPALAMLPSCFIN-----PG---DVTLMTVPGYPVTGTHT 147 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCCCcc---eE--EEccCHHHHHHHHHHHhCC-----CC---CEEEEeCCCCccHHHHH
Confidence 577788888888888777754 331 26 8999999999999988753 66 89999999999999999
Q ss_pred hhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccchhh
Q 009181 244 QYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLP 318 (541)
Q Consensus 244 ~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~~~~ 318 (541)
+.+|++++.+|+++ ++.+|++++++++.+++++|++++|+||||.+.+ +++|.++|++|+++|++|++|+.+..
T Consensus 148 ~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~- 226 (410)
T PRK06290 148 KYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTF- 226 (410)
T ss_pred HHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhcee-
Confidence 99999999999975 5778999999999889999999999999999988 67888899999999999999987643
Q ss_pred hhhhcCCCCCCCCc-CCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHH
Q 009181 319 FAKKLGYPIPPFDF-SVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAG 396 (541)
Q Consensus 319 f~~~~g~~~p~~~~-~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~ 396 (541)
.... .+-... ...+.+++..++.|.. .++..+|+++. ++++..........+..+ ....+
T Consensus 227 --~~~~--~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~-~~~l~~~l~~~~~~~~~~-------------~~~~~ 288 (410)
T PRK06290 227 --DGKP--LSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG-NELIVKAFATVKDNNDSG-------------QFIAI 288 (410)
T ss_pred --CCCC--cChhcCCCccccEEEEeechhhcCCchhheEeEEe-CHHHHHHHHHHHhccccC-------------CcHHH
Confidence 1100 111111 1224567788899994 34445898664 444433221111111111 11124
Q ss_pred HHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEE-EEecCC--------CCHHHHHHHHHhCCce
Q 009181 397 AWAALMSLGQ-EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIV-AFGSDV--------VDIFEVNDIMSSKGWH 466 (541)
Q Consensus 397 ~~~al~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v-~f~~~~--------~~~~~l~~~l~~~G~~ 466 (541)
+.++...+.. +..++..++..++++++.+.|++. ++.+.. |..+++ +++.++ .+..++.+.|.++|..
T Consensus 289 q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v 366 (410)
T PRK06290 289 QKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKAEM-PGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLI 366 (410)
T ss_pred HHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCeecC-CCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCE
Confidence 4444444432 345667788888899999999987 777654 444444 456643 2567899999988754
Q ss_pred ec--cCCCCCeEEEEecCCCH--HHHHHHHHHHHHHHHHHH
Q 009181 467 LN--PLQRPNSIHICVTLQHV--AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 467 ~~--~~~~~~~iRi~~~~~~~--e~id~~i~~L~~~~~~l~ 503 (541)
+. ....++++||+++..+. ++.++++++|++.+..+.
T Consensus 367 ~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 367 STVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred EEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence 32 22334689999986443 899999999999987653
No 94
>PRK08363 alanine aminotransferase; Validated
Probab=99.91 E-value=1e-21 Score=205.95 Aligned_cols=308 Identities=15% Similarity=0.164 Sum_probs=211.9
Q ss_pred cccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH
Q 009181 163 LDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ 240 (541)
|...++..++++.+.+++...+|. ++++ + ++|+|+++++.+++.++.+ +| ++|+++.++|+.+.
T Consensus 66 Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~----i--~it~G~~~al~~~~~~~~~-----~g---d~Vl~~~p~y~~~~ 131 (398)
T PRK08363 66 YGPSEGLPELREAIVKREKRKNGVDITPDD----V--RVTAAVTEALQLIFGALLD-----PG---DEILIPGPSYPPYT 131 (398)
T ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCChhh----E--EEeCCHHHHHHHHHHHhCC-----CC---CEEEEcCCCCcchH
Confidence 433566777888777777776664 4444 6 8999999999999988753 66 89999999999999
Q ss_pred HHHhhcCCeEEEe-eCCC-CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccc
Q 009181 241 KAAQYFNIKLWRV-PVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 241 ka~~~~G~~v~~v-~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~ 315 (541)
..++.+|.+++.+ +.++ ++.+|++++++++++++.++++++|+||||.+.+ +++|.++|+++|+++++|++|+.+
T Consensus 132 ~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~ 211 (398)
T PRK08363 132 GLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLM 211 (398)
T ss_pred HHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhh
Confidence 9999999998888 5554 5689999999999989999999999999999977 889999999999999999999865
Q ss_pred hhhhhhhcCCCCCCCCcCCCCceEEEeCCCCC-CCCCCCceEEEEe-cccccccccccccccCCCccCCCcccCCCCCch
Q 009181 316 VLPFAKKLGYPIPPFDFSVQGVTSISVDVHKY-GLAPKGTSVVLYR-NREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGL 393 (541)
Q Consensus 316 ~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~-~~~p~g~g~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~ 393 (541)
... .. ...+..++ ...-.++..+++|. +.++.++|+++.. +++...........+... ....+
T Consensus 212 ~~~--~~-~~~~~~~~--~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~s----- 276 (398)
T PRK08363 212 TYE--GK-HVSPGSLT--KDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLARI-----RLCPN----- 276 (398)
T ss_pred ccC--Cc-ccCHHHcC--cCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHhcc-----cccCC-----
Confidence 431 10 00000111 11113456688998 5677779998773 332221100000000000 00011
Q ss_pred HHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEE-ecCC---CCHHHH-HHHHHhCCce
Q 009181 394 IAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAF-GSDV---VDIFEV-NDIMSSKGWH 466 (541)
Q Consensus 394 ~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f-~~~~---~~~~~l-~~~l~~~G~~ 466 (541)
..++.++...+ ..+.+++..+++.+.++++.+.|++++++++. +|..+++.| +.++ .+..++ ...|.++|+.
T Consensus 277 ~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~-~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~ 355 (398)
T PRK08363 277 TPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTT-KPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVL 355 (398)
T ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEec-CCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEE
Confidence 12334333333 34667788888889999999999988888754 455565555 5543 234454 4556888976
Q ss_pred ecc---CC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 467 LNP---LQ--RPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 467 ~~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
+.. ++ .++++|+|+. .+.+++++.+++|++++++
T Consensus 356 v~~g~~f~~~~~~~iRis~~-~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 356 FVHGSGFGEYGAGHFRLVFL-PPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred EeCchhhCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHH
Confidence 533 22 1468999997 3568899999999988765
No 95
>PRK07337 aminotransferase; Validated
Probab=99.91 E-value=9.9e-22 Score=205.34 Aligned_cols=313 Identities=14% Similarity=0.108 Sum_probs=216.2
Q ss_pred HHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCC
Q 009181 149 NEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITR 226 (541)
Q Consensus 149 ~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~ 226 (541)
.+++...+..+...|....+..++++.+.+++.+.+|. ++++ + ++|+|+++|+.+++.++.+ +|
T Consensus 49 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~----i--~~t~G~~~al~~~~~~l~~-----~g--- 114 (388)
T PRK07337 49 VEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPER----I--VVTAGASAALLLACLALVE-----RG--- 114 (388)
T ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHh----E--EEecCcHHHHHHHHHHhcC-----CC---
Confidence 44444444333344555567778888888888887775 4443 6 8999999999999888743 66
Q ss_pred CeEEecCCccchHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHH
Q 009181 227 PEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALS 301 (541)
Q Consensus 227 ~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~ 301 (541)
++|+++.++|+++...++..|++++.+|+++ ++.+|++++++++++++++|++++|+||||.+.+ +++|+++|++
T Consensus 115 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~ 194 (388)
T PRK07337 115 DEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRA 194 (388)
T ss_pred CEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHH
Confidence 8999999999999999999999999999974 5789999999999999999999999999999876 6788999999
Q ss_pred cCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceE-EEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCc
Q 009181 302 HGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTS-ISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGL 379 (541)
Q Consensus 302 ~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvds-is~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~ 379 (541)
+++++++|++|..+.. .... .+... .+.+. ...+++|.+ ..+..+|+++..+ ++..........+..+
T Consensus 195 ~~~~ii~De~y~~~~~---~~~~--~~~~~---~~~~vi~~~S~SK~~~~~G~RiG~~~~~~-~l~~~l~~~~~~~~~~- 264 (388)
T PRK07337 195 RGGFTIVDEIYQGLSY---DAAP--VSALS---LGDDVITINSFSKYFNMTGWRLGWLVVPE-ALVGTFEKLAQNLFIC- 264 (388)
T ss_pred CCCEEEEecccccccc---CCCC--cChhh---ccCCEEEEEechhhcCCchhheeeeecCH-HHHHHHHHHHHHhccC-
Confidence 9999999999986543 1100 11111 12233 355889984 2344489877654 3332211111111100
Q ss_pred cCCCcccCCCCCchHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHhhcCCCeEEe-cCCCeeEEEEecCC-----
Q 009181 380 YVSPTVAGSRPGGLIAGAWAALMSLGQ---EGYLENTKAIMEVSESIQKGIKEIPELFII-GRPDMTIVAFGSDV----- 450 (541)
Q Consensus 380 ~~~~~~~gsr~~~~~a~~~~al~~lg~---~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~~~~~~v~f~~~~----- 450 (541)
.+ ..+++++...+.. +.+++..+.+.++++++.+.|+++ ++.+. .+....+++++++.
T Consensus 265 -------~s-----~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~~g~f~~~~~~~~~~~~ 331 (388)
T PRK07337 265 -------AS-----ALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMPDGAFYVYADCRGVAHPA 331 (388)
T ss_pred -------CC-----hHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCeeEEEEEecccccCCC
Confidence 01 2245555555532 346677777888889999999886 66543 34445677777653
Q ss_pred -CCHHHHHHH-HHhCCceecc---CC---CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 009181 451 -VDIFEVNDI-MSSKGWHLNP---LQ---RPNSIHICVTLQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 451 -~~~~~l~~~-l~~~G~~~~~---~~---~~~~iRi~~~~~~~e~id~~i~~L~~~~ 499 (541)
.+..++.+. +.++|+.+.. ++ .++++|+|++. +.+++++.+++|.+++
T Consensus 332 ~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 332 AGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-SMSRLEEAVARLGKLF 387 (388)
T ss_pred CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence 356788876 4567876632 22 24799999996 5688888888887653
No 96
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=5.2e-22 Score=205.03 Aligned_cols=282 Identities=16% Similarity=0.188 Sum_probs=207.9
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++.+|.+..+ ++ ++|+|+++++..++.++.+ +| ++|+++.++|+.+...++..|++++.+|
T Consensus 67 ~lr~~ia~~~~~~~~~---~I--~~t~G~~~~i~~~~~~~~~-----~g---d~vlv~~P~y~~~~~~~~~~g~~~~~i~ 133 (356)
T PRK04870 67 ALKAALRAAMGVPAGA---DV--LLGNGSDELIQLLALACAK-----PG---ATVLAPEPGFVMYRMSAKLAGLEFVGVP 133 (356)
T ss_pred HHHHHHHHHhCcCCCC---cE--EEcCCHHHHHHHHHHHhcC-----CC---CEEEECCCCHHHHHHHHHHcCCEEEEec
Confidence 4666888888886542 36 8999999999998887753 66 8999999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhhc-cCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcC
Q 009181 255 VDKEFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS 333 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~-~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~ 333 (541)
+++++.+|++++++++. .++++|++++|+||||.+.+.+++.++++..++++++|++|..+... .. .+.++
T Consensus 134 ~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~-----~~-~~~~~-- 205 (356)
T PRK04870 134 LTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGD-----SW-LPRLA-- 205 (356)
T ss_pred CCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCc-----ch-HHHHh--
Confidence 98888999999999996 47899999999999999999988888888779999999999765320 00 11111
Q ss_pred CCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh-HHHHHHH
Q 009181 334 VQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG-QEGYLEN 412 (541)
Q Consensus 334 ~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg-~~g~~~~ 412 (541)
...-..+..+++|++..+..+|+++.. +++..........|.. + ..++.++...+. .+.+++.
T Consensus 206 ~~~~vi~~~S~SK~~~~GlRiG~~i~~-~~~i~~~~~~~~~~~~----------~-----~~~q~~a~~~l~~~~~~~~~ 269 (356)
T PRK04870 206 RFPNLLVMRTVSKLGLAGLRLGYLAGH-PAWIAELDKVRPPYNV----------N-----VLTQATALFALEHVDVLDAQ 269 (356)
T ss_pred hCCCEEEEecchhhhhHHHhhhhhhCC-HHHHHHHHHccCCCcC----------C-----HHHHHHHHHHHhCHHHHHHH
Confidence 111246677889976556669986654 4443322211112211 1 123334333332 2457788
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceecc---CC--CCCeEEEEecCCCHHH
Q 009181 413 TKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP---LQ--RPNSIHICVTLQHVAV 487 (541)
Q Consensus 413 ~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~---~~--~~~~iRi~~~~~~~e~ 487 (541)
.++..++++++.+.|++++++.+. ++..++++++.+ +..++.+.|.++|+.+.. ++ .++++|++++ +.++
T Consensus 270 ~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~ 344 (356)
T PRK04870 270 AAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVP--DAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG--TPEE 344 (356)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC--CHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC--CHHH
Confidence 888899999999999998888754 566778888775 567888999999977643 21 2479999998 3688
Q ss_pred HHHHHHHHHHH
Q 009181 488 VDVFLRDLRES 498 (541)
Q Consensus 488 id~~i~~L~~~ 498 (541)
+++|+++|+++
T Consensus 345 ~~~l~~al~~~ 355 (356)
T PRK04870 345 NAQFLAALKAA 355 (356)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 97
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.91 E-value=7.2e-22 Score=193.56 Aligned_cols=329 Identities=16% Similarity=0.169 Sum_probs=240.5
Q ss_pred HHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC
Q 009181 144 HFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (541)
Q Consensus 144 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G 223 (541)
.+..+.+++.+.....-++|. -...++-..+..|..+.++.....+ .+ ++++|.--++.++++++.+ +|
T Consensus 39 ~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e--~i--~~~p~VVpgi~~~I~~~T~-----~g 107 (388)
T COG1168 39 TPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKPE--WI--VFVPGVVPGISLAIRALTK-----PG 107 (388)
T ss_pred CCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcc--eE--EEcCcchHhHHHHHHHhCc-----CC
Confidence 345667778777777777775 3345677789999999998874331 14 8999999999999999874 77
Q ss_pred CCCCeEEecCCccchHHHHHhhcCCeEEEeeCC-C--CCccCHHHHHHhhccC-ceEEEeecCCCCCccc---cCHHHHH
Q 009181 224 ITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD-K--EFRADVKAIKKYINRN-TVLIVGSAPGFPHGII---DPIQELG 296 (541)
Q Consensus 224 i~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~-~--~~~~d~~~Le~~i~~~-t~~vv~~~~~~~~G~i---d~i~~I~ 296 (541)
+.|++..+.|+.|.++.+..|-++...|.. + .+.||.++||+++.+. ++++++|+|+||+|.+ +.+.+|+
T Consensus 108 ---d~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~ 184 (388)
T COG1168 108 ---DGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIA 184 (388)
T ss_pred ---CeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHH
Confidence 999999999999999999999999999985 2 5678999999998764 6999999999999988 5699999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCC--CcCCCCceEEEeCCCCCC-CCCCCceEEEEeccccccccccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF--DFSVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVT 373 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~--~~~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~ 373 (541)
+||+|||+.++.|+.+.-+++. ...+ .|.. +.......+.+.++.|.+ .++..++.++..|++++........
T Consensus 185 elc~kh~v~VISDEIHaDlv~~---g~~h-~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~ 260 (388)
T COG1168 185 ELCLRHGVRVISDEIHADLVLG---GHKH-IPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLK 260 (388)
T ss_pred HHHHHcCCEEEeeccccccccc---CCCc-cchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHH
Confidence 9999999999999999877662 1111 2211 111222345556778984 3555688888888876543211100
Q ss_pred ccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEecCCCeeEEEEecCCC-
Q 009181 374 EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKE-IPELFIIGRPDMTIVAFGSDVV- 451 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~~~~v~f~~~~~- 451 (541)
. .+ ...++..| +.+.-+|. ..|..++.+..+.+.++.+++.+.+.+ +|++++..+..+-+.++.+...
T Consensus 261 ~-~~--~~~~n~lg------~~A~~aAY-~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~ 330 (388)
T COG1168 261 R-NG--LHGPSALG------IIATEAAY-NQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELG 330 (388)
T ss_pred H-hc--CCCCchHH------HHHHHHHH-HhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccC
Confidence 0 00 00111111 33444444 369999999999999999999999997 7999999887788888887654
Q ss_pred -CHHHHHHHHHhCCceecc----CC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 452 -DIFEVNDIMSSKGWHLNP----LQ--RPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 452 -~~~~l~~~l~~~G~~~~~----~~--~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
+..++.+.|.++.-+... +| ..+++|+.+.. +.+-+++.+++|+.+++.
T Consensus 331 l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~al~~ 386 (388)
T COG1168 331 LDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRALKK 386 (388)
T ss_pred CChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHHHhc
Confidence 556888888877533221 22 23799999986 347778888888877654
No 98
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.91 E-value=1.1e-21 Score=211.89 Aligned_cols=311 Identities=16% Similarity=0.200 Sum_probs=210.8
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhC--CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLG--NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g--~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
.+|....|..++.+.+.+++.+..+ +++++ | ++|+|+++++.+++.++.+ +| ++|+++.+.|+.
T Consensus 179 ~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~----I--~it~G~~eal~~~~~~l~~-----~G---d~Vli~~P~y~~ 244 (517)
T PRK13355 179 EGYSDSKGLFSARKAIMQYAQLKGLPNVDVDD----I--YTGNGVSELINLSMSALLD-----DG---DEVLIPSPDYPL 244 (517)
T ss_pred CCCCCCcChHHHHHHHHHHHHhcCCCCCChhH----E--EEeCcHHHHHHHHHHHhCC-----CC---CEEEEcCCCCcC
Confidence 3465566777777777777655433 44554 7 8999999999999988754 67 999999999999
Q ss_pred HHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcc
Q 009181 239 YDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~g 313 (541)
+...++..|++++.+++++ +|.+|+++++++++++|++|++++|+||||.+.+ +++|+++|++|++++++|++|+
T Consensus 245 y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~ 324 (517)
T PRK13355 245 WTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYD 324 (517)
T ss_pred HHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhh
Confidence 9999999999999999874 5889999999999999999999999999999988 8899999999999999999998
Q ss_pred cchhhhhhhcCCCCCCCCcCCCCceEE-EeCCCCC-CCCCCCceEEEEe-cccccccccccccccCCCccCCCcccCCCC
Q 009181 314 GFVLPFAKKLGYPIPPFDFSVQGVTSI-SVDVHKY-GLAPKGTSVVLYR-NREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~~~~~~gvdsi-s~~~hK~-~~~p~g~g~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~ 390 (541)
.+... ... .+.+......+..+ ..++.|. +.++..+|+++.. ++++......... .... .+.
T Consensus 325 ~~~~~---~~~--~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~-----~~~~-----~~~ 389 (517)
T PRK13355 325 RLVMD---GLE--HTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLN-----MLAN-----MRL 389 (517)
T ss_pred hhcCC---CCC--cccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHH-----HHhc-----CcC
Confidence 66531 100 00111111233233 3577898 3455569997764 3322111000000 0000 001
Q ss_pred CchHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEE-ecCC-----CCHHHH-HHH
Q 009181 391 GGLIAGAWAALMSLGQ----EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAF-GSDV-----VDIFEV-NDI 459 (541)
Q Consensus 391 ~~~~a~~~~al~~lg~----~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f-~~~~-----~~~~~l-~~~ 459 (541)
.....+++++...+.. ..+.+..++..+.++++.+.|+++|++++. +|..+++.| +++. .+..++ .+.
T Consensus 390 ~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~-~p~g~fy~~~~l~~~~~~~~~~~~~~~~l 468 (517)
T PRK13355 390 CSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAV-KPKAAFYIFPKIDVKKFNIHDDEQFALDL 468 (517)
T ss_pred CcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccC-CCCeeeEEEeecCcccCCCCCHHHHHHHH
Confidence 1113356666555532 112222345566788999999998898865 556666555 5542 123344 456
Q ss_pred HHhCCceecc---CC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 460 MSSKGWHLNP---LQ--RPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 460 l~~~G~~~~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
|.++|+.+.. ++ .++++|+++. ...+++++.+++|+++++..
T Consensus 469 l~~~gV~v~pg~~F~~~~~~~~Ris~~-~~~~~l~~a~~rl~~~~~~~ 515 (517)
T PRK13355 469 LHDKKVLIVQGTGFNWDKPDHFRVVYL-PRLEDLEDAMDRLADFFSYY 515 (517)
T ss_pred HHhCCEEEeCcchhCCCCcCEEEEEeC-CCHHHHHHHHHHHHHHHHHh
Confidence 7788876532 32 3579999995 45699999999999988654
No 99
>PRK08960 hypothetical protein; Provisional
Probab=99.90 E-value=2.2e-21 Score=202.61 Aligned_cols=315 Identities=13% Similarity=0.124 Sum_probs=214.0
Q ss_pred HHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC
Q 009181 147 LINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI 224 (541)
Q Consensus 147 ~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi 224 (541)
.+.+++.+.+..+..+|...++..++.+.+.+++.+.+|. ++++ + ++|+|+++++..++.++.+ +|
T Consensus 49 ~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~----i--~it~G~~~al~~~~~~~~~-----~g- 116 (387)
T PRK08960 49 PIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPER----I--LVTPGGSGALLLASSLLVD-----PG- 116 (387)
T ss_pred HHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhh----E--EEccCcHHHHHHHHHHhcC-----CC-
Confidence 3444444444333345555667778888788888777665 4444 6 8999999999999988753 66
Q ss_pred CCCeEEecCCccchHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHH
Q 009181 225 TRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELA 299 (541)
Q Consensus 225 ~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la 299 (541)
++|++++++|+++...++..|.+++.+|+++ ++.+|+++++++++++++++++++|+||||.+.+ +++|+++|
T Consensus 117 --d~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~ 194 (387)
T PRK08960 117 --KHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQAL 194 (387)
T ss_pred --CEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHH
Confidence 8999999999999999999999999999975 4689999999999999999999999999999987 55778889
Q ss_pred HHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCC
Q 009181 300 LSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSG 377 (541)
Q Consensus 300 ~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~ 377 (541)
++||+++++|++|..+.. .... .+.... ..-.++..+++|. ++..| +|+++..+ ++..........+..
T Consensus 195 ~~~~~~li~De~Y~~~~~---~~~~--~~~~~~--~~~vi~~~S~SK~-~g~~GlRiG~~~~~~-~~~~~~~~~~~~~~~ 265 (387)
T PRK08960 195 RARGGHLVVDEIYHGLTY---GVDA--ASVLEV--DDDAFVLNSFSKY-FGMTGWRLGWLVAPP-AAVPELEKLAQNLYI 265 (387)
T ss_pred HHcCCEEEEEcccccccc---CCCC--CChhhc--cCCEEEEeecccc-cCCcccEEEEEEcCH-HHHHHHHHHHhhhcc
Confidence 999999999999987543 1100 111111 1224566789998 44444 99877654 333321111111110
Q ss_pred CccCCCcccCCCCCchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-CeeEEEEecCC--C
Q 009181 378 GLYVSPTVAGSRPGGLIAGAWAALMSLG---QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-DMTIVAFGSDV--V 451 (541)
Q Consensus 378 ~~~~~~~~~gsr~~~~~a~~~~al~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~~v~f~~~~--~ 451 (541)
..+ ...+.++...+. ...+.+..+...+.++.+.+.|++. ++.+...| ...+++++.++ .
T Consensus 266 --------~~s-----~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p~g~~f~~~~~~~~~~ 331 (387)
T PRK08960 266 --------SAS-----TPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAVEPQGAFYLYADISAFGG 331 (387)
T ss_pred --------CCC-----HHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCCCeeEEEEEeccccCC
Confidence 011 223444443342 2456666777788888899999886 66553334 44556666653 4
Q ss_pred CHHHHHHHHH-hCCceecc---CC---CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 009181 452 DIFEVNDIMS-SKGWHLNP---LQ---RPNSIHICVTLQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 452 ~~~~l~~~l~-~~G~~~~~---~~---~~~~iRi~~~~~~~e~id~~i~~L~~~~ 499 (541)
+..++++.|. ++|+.+.. ++ .++++|+|++. ..+.+.+.+++|++++
T Consensus 332 ~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~-~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 332 DAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ-SLPRLQEAVERIARGL 385 (387)
T ss_pred CHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence 6778888765 57876543 22 23689999996 4577777777776654
No 100
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.90 E-value=5.8e-21 Score=200.47 Aligned_cols=310 Identities=16% Similarity=0.185 Sum_probs=210.7
Q ss_pred CcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH
Q 009181 162 HLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (541)
Q Consensus 162 ~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~ 239 (541)
+|...++..++++.+.+++....+. ++++ + ++|+|+|+|+.+++.++.+ +| ++|+++.++|+.+
T Consensus 68 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~----i--i~t~G~t~al~~~~~~l~~-----~g---d~Vlv~~p~y~~~ 133 (403)
T TIGR01265 68 GYAPSVGALAAREAVAEYLSSDLPGKLTADD----V--VLTSGCSQAIEICIEALAN-----PG---ANILVPRPGFPLY 133 (403)
T ss_pred CCCCCCCCHHHHHHHHHHHHhhcCCCCCHHH----E--EEecChHHHHHHHHHHhCC-----CC---CEEEEeCCCchhH
Confidence 3433455555555444444433332 3333 6 8999999999999999853 66 8999999999999
Q ss_pred HHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCccc
Q 009181 240 DKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGG 314 (541)
Q Consensus 240 ~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg 314 (541)
...++..|++++.+++++ ++.+|++++++++++++.++++++|+||+|.+.+ +++|.++|+++|+++++|++|+.
T Consensus 134 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~ 213 (403)
T TIGR01265 134 DTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGH 213 (403)
T ss_pred HHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccc
Confidence 999999999999998853 6789999999999999999999999999999976 88999999999999999999987
Q ss_pred chhhhhhhcCCCCCCCCcCCCCc-eEEEeCCCCC-CCCCCCceEEEEecc-ccccccccc-ccccCCCccCCCcccCCCC
Q 009181 315 FVLPFAKKLGYPIPPFDFSVQGV-TSISVDVHKY-GLAPKGTSVVLYRNR-EIRKHQFVA-VTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 315 ~~~~f~~~~g~~~p~~~~~~~gv-dsis~~~hK~-~~~p~g~g~ll~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~gsr~ 390 (541)
+... . .+.+++.-..... -+++.++.|. +..+..+|+++..++ +.....+.. ..... ....
T Consensus 214 ~~~~--~---~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~-----~~~~----- 278 (403)
T TIGR01265 214 MVFG--D---APFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLL-----QRIL----- 278 (403)
T ss_pred cccC--C---CCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHh-----hhhc-----
Confidence 7531 1 0001111011111 3556688898 555667999887643 211110000 00000 0000
Q ss_pred CchHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC------CHHHHHHHH-
Q 009181 391 GGLIAGAWAALMSL---GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV------DIFEVNDIM- 460 (541)
Q Consensus 391 ~~~~a~~~~al~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~------~~~~l~~~l- 460 (541)
+....++.++...+ ....+++..+++.+.++++.+.|++++++++..+..+.+++++.+.. +..++.+.+
T Consensus 279 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~ 358 (403)
T TIGR01265 279 GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLV 358 (403)
T ss_pred CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccccCCCCCHHHHHHHHH
Confidence 00011333333333 23556777888888899999999988888766566677888876531 567887775
Q ss_pred HhCCceecc---CCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 461 SSKGWHLNP---LQRPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 461 ~~~G~~~~~---~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
.+.|+.+.. ++.++++|+|++. ..+.+++.+++|++++++
T Consensus 359 ~~~gv~v~pg~~f~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 359 REESVICLPGSAFGLPNWVRITITV-PESMLEEACSRIKEFCER 401 (403)
T ss_pred HhCCEEEeCccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 567876543 3456899999985 457888888888887754
No 101
>PRK09082 methionine aminotransferase; Validated
Probab=99.90 E-value=7.5e-22 Score=206.06 Aligned_cols=304 Identities=16% Similarity=0.166 Sum_probs=213.9
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ 240 (541)
..|....+..++++++.+++.+++|.+... ..++ ++|+|+++|+..++.++.+ +| ++|+++.+.|+++.
T Consensus 61 ~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~-~~~i--~~t~G~~~al~~~~~~~~~-----~g---d~Vli~~p~y~~~~ 129 (386)
T PRK09082 61 NQYPPMTGVAALREAIAAKTARLYGRQYDA-DSEI--TVTAGATEALFAAILALVR-----PG---DEVIVFDPSYDSYA 129 (386)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-CCcE--EEeCCHHHHHHHHHHHHcC-----CC---CEEEEeCCCchhhH
Confidence 345556678889999999999998875321 0025 8999999999999988753 66 89999999999999
Q ss_pred HHHhhcCCeEEEeeCCC-CCccCHHHHHHhhccCceEEEeecCCCCCccc---cCHHHHHHHHHHcCCEEEEeCCcccch
Q 009181 241 KAAQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGII---DPIQELGELALSHGTCLHVDLCLGGFV 316 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~i---d~i~~I~~la~~~~i~lhvD~a~gg~~ 316 (541)
.+++.+|++++.+++++ ++.+|+++++++++++++++++++|+||||.+ +++++|.++|++|++++++|++|+.+.
T Consensus 130 ~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~ 209 (386)
T PRK09082 130 PAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIV 209 (386)
T ss_pred HHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhc
Confidence 99999999999999974 78999999999999999999999999999987 568899999999999999999998665
Q ss_pred hhhhhhcCCCCCCCCc-CCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccc--cccCCCccCCCcccCCCCCc
Q 009181 317 LPFAKKLGYPIPPFDF-SVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAV--TEWSGGLYVSPTVAGSRPGG 392 (541)
Q Consensus 317 ~~f~~~~g~~~p~~~~-~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~~gsr~~~ 392 (541)
.. ...+ .+.... ...+..++..++.|.. ..+..+|+++.. +++........ ..|. .
T Consensus 210 ~~--~~~~--~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~-~~l~~~~~~~~~~~~~~-------------~-- 269 (386)
T PRK09082 210 FD--GAGH--ASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP-AALSAEFRKVHQYNTFT-------------V-- 269 (386)
T ss_pred cC--CCCC--CChhhCcCccCcEEEEeechhhccchhhhhhhhhCC-HHHHHHHHHHHhhhcCC-------------C--
Confidence 31 1101 000111 1123456777889984 234458986654 44433211111 1110 0
Q ss_pred hHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecC---CCCHHHHHHHH-HhCCce
Q 009181 393 LIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSD---VVDIFEVNDIM-SSKGWH 466 (541)
Q Consensus 393 ~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~---~~~~~~l~~~l-~~~G~~ 466 (541)
....+.++...+ ..+.+++..+.+.++++++.+.|++. ++++..+....+++++++ +.+..++.+.| .+.|+.
T Consensus 270 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 348 (386)
T PRK09082 270 NTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVA 348 (386)
T ss_pred ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEE
Confidence 122333333334 34567777778888899999999885 777654333445566765 34678898876 566876
Q ss_pred ecc---CC----CCCeEEEEecCCCHHHHHHHHHHHHH
Q 009181 467 LNP---LQ----RPNSIHICVTLQHVAVVDVFLRDLRE 497 (541)
Q Consensus 467 ~~~---~~----~~~~iRi~~~~~~~e~id~~i~~L~~ 497 (541)
+.. ++ .++++|+|++. +.+++++.+++|++
T Consensus 349 v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~ 385 (386)
T PRK09082 349 AIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ 385 (386)
T ss_pred EeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 533 21 13689999986 56888888888865
No 102
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=2.5e-22 Score=206.89 Aligned_cols=281 Identities=17% Similarity=0.145 Sum_probs=204.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEe
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v 253 (541)
.++++++++.+|+++++ | ++|+|+++++.++++++.+ +| .++|+++.++|+.+...++..|++++.+
T Consensus 60 ~~l~~~~a~~~g~~~~~----I--~~~~Gs~e~i~~~~~~~~~-----~g--~~~vli~~P~y~~y~~~~~~~G~~~~~v 126 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQ----V--LVSRGADEGIELLIRAFCE-----PG--KDAILYCPPTYGMYSVSAETIGVEIRTV 126 (351)
T ss_pred HHHHHHHHHHhCCCHHH----E--EEcCCHHHHHHHHHHHhcC-----CC--CCEEEEcCCCHHHHHHHHHHcCCEEEEe
Confidence 35777999999998876 7 8999999999999988743 32 1679999999999999999999999999
Q ss_pred eCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHc--CCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 254 PVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH--GTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 254 ~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~--~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
|.++++.+|++++++++ +++++|++++||||||++.+.+++.++++.. ++++++|++|..|... ... .+..
T Consensus 127 ~~~~~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~---~s~--~~~~- 199 (351)
T PRK01688 127 PTLDNWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQ---ASL--AGWL- 199 (351)
T ss_pred ecCCCCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCC---CCh--HHHH-
Confidence 99888999999999988 5899999999999999999887777776542 6899999999766420 000 0000
Q ss_pred cCCCCceEEEeCCCCCCCCCC--CceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh---H
Q 009181 332 FSVQGVTSISVDVHKYGLAPK--GTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG---Q 406 (541)
Q Consensus 332 ~~~~gvdsis~~~hK~~~~p~--g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg---~ 406 (541)
...+--++.-+++|. ++.. .+|+++. ++++..........|..+ ..++.++...+. .
T Consensus 200 -~~~~n~iv~rSfSK~-~glaGlRiGy~i~-~~~~i~~l~~~~~~~~v~---------------~~~~~~a~~~L~~~~~ 261 (351)
T PRK01688 200 -AEYPHLVILRTLSKA-FALAGLRCGFTLA-NEEVINLLLKVIAPYPLS---------------TPVADIAAQALSPQGI 261 (351)
T ss_pred -hhCCCEEEEecchHh-hcCHHHHHhHHhC-CHHHHHHHHhccCCCCCC---------------HHHHHHHHHHHhcchH
Confidence 011124666788997 4544 4787654 454443322222233211 112233333332 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccC----CCCCeEEEEecC
Q 009181 407 EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPL----QRPNSIHICVTL 482 (541)
Q Consensus 407 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~----~~~~~iRi~~~~ 482 (541)
+.+++..+.+.+.++++.+.|+++++++.+.++..++++++.. +..++.+.|.++|+.+... +.++++|++++
T Consensus 262 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~--~~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~- 338 (351)
T PRK01688 262 AAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT--ASSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG- 338 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--CHHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC-
Confidence 4567778888888999999999988876555777788888765 5678999999999876543 34579999998
Q ss_pred CCHHHHHHHHHHHH
Q 009181 483 QHVAVVDVFLRDLR 496 (541)
Q Consensus 483 ~~~e~id~~i~~L~ 496 (541)
+.+++++++++|+
T Consensus 339 -~~~e~~~l~~al~ 351 (351)
T PRK01688 339 -TREECQRVIDALR 351 (351)
T ss_pred -CHHHHHHHHHhhC
Confidence 4589999998873
No 103
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.90 E-value=8.1e-22 Score=203.18 Aligned_cols=293 Identities=17% Similarity=0.108 Sum_probs=201.8
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++++|.+. + +++++||+|+..++.+++. ++| ++|+++..+|.++..++...|++++.++
T Consensus 22 ~~~~~la~~~~~~~------~--~~~~sgt~al~~~l~~l~~----~~g---d~vl~~~~~~~~~~~~~~~~g~~~~~~~ 86 (352)
T cd00616 22 EFEKAFAEYLGVKY------A--VAVSSGTAALHLALRALGI----GPG---DEVIVPSFTFVATANAILLLGATPVFVD 86 (352)
T ss_pred HHHHHHHHHhCCCe------E--EEECCHHHHHHHHHHHcCC----CCC---CEEEeCCcchHHHHHHHHHcCCeEEEEe
Confidence 35558888898642 3 7888999999999988731 255 8999999999999999999999999999
Q ss_pred CCC-CCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcC
Q 009181 255 VDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS 333 (541)
Q Consensus 255 ~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~ 333 (541)
+++ ++.+|++++++++++++++|++++ ++|.+.|+++|.++|+++|+++++|++++.+..+ .+. ... .
T Consensus 87 ~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~----~~~---~~~-~ 155 (352)
T cd00616 87 IDPDTYNIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATY----KGR---KVG-T 155 (352)
T ss_pred cCCCcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeE----CCE---Ecc-c
Confidence 987 889999999999999999998875 5899999999999999999999999998644321 000 000 0
Q ss_pred CCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCcc--CCCcccCCCCCchHHHHHHHHHHHhHHHHHH
Q 009181 334 VQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLY--VSPTVAGSRPGGLIAGAWAALMSLGQEGYLE 411 (541)
Q Consensus 334 ~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~ 411 (541)
...++.+++..||++ +....|+++++++++................ ......|...+.. ..-+++.....+++++
T Consensus 156 ~~d~~~~S~~~~K~~-~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~aa~~~~~l~~~~~ 232 (352)
T cd00616 156 FGDAGAFSFHPTKNL-TTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLS--EIQAAIGLAQLEKLDE 232 (352)
T ss_pred CcceeEEcCCCCCCC-cccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcC--HHHHHHHHHHHHhhHH
Confidence 112344444466996 3333466666665543321110000000000 0001111111222 2222222234567788
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEecCCC-----eeEEEEecC---CCCHHHHHHHHHhCCceeccC-------------
Q 009181 412 NTKAIMEVSESIQKGIKEIPELFIIGRPD-----MTIVAFGSD---VVDIFEVNDIMSSKGWHLNPL------------- 470 (541)
Q Consensus 412 ~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----~~~v~f~~~---~~~~~~l~~~l~~~G~~~~~~------------- 470 (541)
..++..++++++++.|+++++++++.++. ..++.|... +.+..++.+.|.++|+.+...
T Consensus 233 ~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~ 312 (352)
T cd00616 233 IIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYPPLHHQPPYKKL 312 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecCccccCHhhhhc
Confidence 89999999999999999999999886532 457788776 357889999999999643211
Q ss_pred ------CCC-------CeEEEEecCCCH-HHHHHHHHHHH
Q 009181 471 ------QRP-------NSIHICVTLQHV-AVVDVFLRDLR 496 (541)
Q Consensus 471 ------~~~-------~~iRi~~~~~~~-e~id~~i~~L~ 496 (541)
..| +.+|++++..++ +|++++++.|+
T Consensus 313 ~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 313 LGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred cCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 012 579999988777 99999998874
No 104
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.90 E-value=1e-21 Score=206.19 Aligned_cols=302 Identities=18% Similarity=0.160 Sum_probs=209.4
Q ss_pred ccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH-
Q 009181 164 DIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA- 242 (541)
Q Consensus 164 ~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka- 242 (541)
...+....+++.+++++++++|.+... ++++|||+|+..++.++.. +| ++|+++.+.|+++...
T Consensus 58 ~~~~~~~~l~~~~~~~~~~~~g~~~~~-------v~~~sgt~a~~~~l~~l~~-----~G---d~Vl~~~~~~~~~~~~~ 122 (402)
T cd00378 58 GGCEYVDEIEDLAIERAKKLFGAEYAN-------VQPHSGSQANLAVYFALLE-----PG---DTIMGLDLSHGGHLTHG 122 (402)
T ss_pred CCchHHHHHHHHHHHHHHHHhCCCcee-------eecCCcHHHHHHHHHHhcC-----CC---CEEEEecCccCcccccc
Confidence 345666778877888999999998653 4444678999999988753 67 8999999998765332
Q ss_pred ----HhhcCCeEEEeeCCC---CCccCHHHHHHhhc-cCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCccc
Q 009181 243 ----AQYFNIKLWRVPVDK---EFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGG 314 (541)
Q Consensus 243 ----~~~~G~~v~~v~~~~---~~~~d~~~Le~~i~-~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg 314 (541)
++..|.+++.++++. ++.+|++++++++. +++++++++++++ |...|+++|+++|++||+++++|+++..
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~--~~~~~~~~I~~l~~~~~~~li~D~a~~~ 200 (402)
T cd00378 123 SFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAY--PRPIDFKRFREIADEVGAYLLVDMAHVA 200 (402)
T ss_pred ccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCccc--CCCcCHHHHHHHHHhcCCEEEEEccchh
Confidence 566788877777643 68999999999995 5788888888865 5677999999999999999999999633
Q ss_pred chhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchH
Q 009181 315 FVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLI 394 (541)
Q Consensus 315 ~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~ 394 (541)
.... .|. . +..+. ++|+++.++||++.||. +|++++.++++..........+ ..++.....+
T Consensus 201 g~~~----~g~-~-~~~~~--~~dv~~~s~sK~l~G~~-gg~i~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~ 262 (402)
T cd00378 201 GLVA----GGV-F-PNPLP--GADVVTTTTHKTLRGPR-GGLILTRKGELAKKINSAVFPG---------LQGGPHLHVI 262 (402)
T ss_pred hhhh----ccc-C-CCccc--CCcEEEeccccCCCCCC-ceEEEeccHHHHHHHHHHhCcc---------ccCCchHHHH
Confidence 2221 111 1 11122 67899999999965555 4656666534443221111111 0111111223
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEec-CCCeeEEEEecCC--CCHHHHHHHHHhCCceeccCC
Q 009181 395 AGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIG-RPDMTIVAFGSDV--VDIFEVNDIMSSKGWHLNPLQ 471 (541)
Q Consensus 395 a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~~~~~~v~f~~~~--~~~~~l~~~l~~~G~~~~~~~ 471 (541)
+++..++......++.+..+++.++++++.+.|++. |+++.. +...+++++...+ .+..++.+.|.++|+.+....
T Consensus 263 ~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~ 341 (402)
T cd00378 263 AAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNT 341 (402)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCc
Confidence 343444443433467788899999999999999987 888764 3456777787753 356677788888897764321
Q ss_pred ---------CCCeEEEEecCCC-----HHHHHHHHHHHHHHHHH
Q 009181 472 ---------RPNSIHICVTLQH-----VAVVDVFLRDLRESVET 501 (541)
Q Consensus 472 ---------~~~~iRi~~~~~~-----~e~id~~i~~L~~~~~~ 501 (541)
.+.++|++++..+ .+|++++++.|++++++
T Consensus 342 ~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 342 LPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 2357999987644 48999999999987743
No 105
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.90 E-value=1.8e-21 Score=204.27 Aligned_cols=303 Identities=14% Similarity=0.148 Sum_probs=213.6
Q ss_pred cccchHHHHHHHHHHHHHHHHhC--CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH
Q 009181 163 LDIFQSVARFEAEVIAMTAALLG--NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g--~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ 240 (541)
|...++..++.+.+.+++.+. + +++++ + ++|+|+++++.+++.++.+ +| ++|+++.+.|+.+.
T Consensus 69 Y~~~~g~~~lr~aia~~~~~~-~~~~~~~~----i--~~t~G~~~al~~~~~~l~~-----~g---d~v~i~~P~y~~~~ 133 (401)
T TIGR01264 69 YAPTVGALSAREAIASYYHNP-DGPIEADD----V--VLCSGCSHAIEMCIAALAN-----AG---QNILVPRPGFPLYE 133 (401)
T ss_pred CCCCCCCHHHHHHHHHHHhhc-CCCCCHHH----E--EECcChHHHHHHHHHHhCC-----CC---CEEEEeCCCChhHH
Confidence 444556666666555555542 2 33443 6 8999999999999988753 56 89999999999999
Q ss_pred HHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccc
Q 009181 241 KAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~ 315 (541)
..++..|++++.++++. ++.+|++++++++++++.++++++|+||||.+.+ +++|+++|+++|+++++|++|+.+
T Consensus 134 ~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~ 213 (401)
T TIGR01264 134 TLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDM 213 (401)
T ss_pred HHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhh
Confidence 99999999999998863 5789999999999888999999999999999975 788999999999999999999876
Q ss_pred hhhhhhhcCCCCCCC-CcCCCCceEEEeCCCCC-CCCCCCceEEEEeccc-----ccccccccc-cccCCCccCCCcccC
Q 009181 316 VLPFAKKLGYPIPPF-DFSVQGVTSISVDVHKY-GLAPKGTSVVLYRNRE-----IRKHQFVAV-TEWSGGLYVSPTVAG 387 (541)
Q Consensus 316 ~~~f~~~~g~~~p~~-~~~~~gvdsis~~~hK~-~~~p~g~g~ll~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~g 387 (541)
... . ...+++ .+....-.++..++.|. +..+..+|+++..++. ......... ..|..
T Consensus 214 ~~~--~---~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~~---------- 278 (401)
T TIGR01264 214 VFS--G---ATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGP---------- 278 (401)
T ss_pred ccC--C---cccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhccCCC----------
Confidence 531 1 001111 11111113567788996 6777779998876431 111100000 01100
Q ss_pred CCCCchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC------CCHHHHHH
Q 009181 388 SRPGGLIAGAWAALMSLG---QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV------VDIFEVND 458 (541)
Q Consensus 388 sr~~~~~a~~~~al~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~------~~~~~l~~ 458 (541)
+ ..++.++...+. .+.+++..+.+.++++++.+.|++++++.+..+..+.+++++++. .+..++.+
T Consensus 279 ~-----~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~ 353 (401)
T TIGR01264 279 C-----TIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTE 353 (401)
T ss_pred C-----cHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCCCCHHHHHH
Confidence 0 123444444342 456777888888899999999999878776555566777777532 24667777
Q ss_pred HHH-hCCceecc---CCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 459 IMS-SKGWHLNP---LQRPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 459 ~l~-~~G~~~~~---~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
.+. ++|+.+.. ++.++++|+|++. ..+++++.+++|.+++++
T Consensus 354 ~l~~~~gI~v~pg~~f~~~~~iRis~~~-~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 354 RLVAEQSVFCLPGSCFEYPGFFRVVLTV-PVVMMEEACSRIQEFCER 399 (401)
T ss_pred HHHHhCCEEEeCchhcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHhc
Confidence 775 78876543 3456899999985 468899999999988764
No 106
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.2e-21 Score=202.15 Aligned_cols=283 Identities=14% Similarity=0.153 Sum_probs=208.3
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.++++++.++++ + ++|+|+++++.++++++.+ +| ++|+++++.|+.+...++..|++++.+|
T Consensus 64 ~lr~aia~~~~~~~~~----I--~it~G~~~al~~~~~~l~~-----~g---d~vlv~~P~y~~~~~~~~~~g~~~~~v~ 129 (353)
T PRK05387 64 ALRQAIAAYYGLDPEQ----V--FVGNGSDEVLAHAFLAFFN-----HD---RPLLFPDITYSFYPVYAGLYGIPYEEIP 129 (353)
T ss_pred HHHHHHHHHhCCCHHH----E--EEcCCHHHHHHHHHHHhcC-----CC---CEEEEeCCCHHHHHHHHHHcCCEEEEee
Confidence 5777888888988765 6 9999999999999998864 67 8999999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHc-CCEEEEeCCcccchhhhhhhcCCCCCCCCcC
Q 009181 255 VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH-GTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS 333 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~-~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~ 333 (541)
.++++.+|++++++ ++.++++++|+||||.+.|.+++.++++.+ ++++++|++|+.|.- ....++- .
T Consensus 130 ~~~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~-------~~~~~~~-~ 197 (353)
T PRK05387 130 LDDDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGG-------ESAIPLI-D 197 (353)
T ss_pred cCCCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCC-------cchHHHH-h
Confidence 98889999999974 457889999999999999999999999886 999999999964421 0000110 1
Q ss_pred CCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh-HHHHHH
Q 009181 334 VQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG-QEGYLE 411 (541)
Q Consensus 334 ~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg-~~g~~~ 411 (541)
...-.++..+++|... .+..+|+++. ++++..........+. .......+++++...+. .+.+++
T Consensus 198 ~~~~~i~~~S~SK~~~~~GlR~G~~~~-~~~~~~~l~~~~~~~~------------~~~~~~~~q~~~~~~l~~~~~~~~ 264 (353)
T PRK05387 198 RYPNLLVVQTFSKSRSLAGLRVGFAIG-HPELIEALNRVKNSFN------------SYPLDRLAQAGAIAAIEDEAYFEE 264 (353)
T ss_pred hCCCEEEEEehhHhhcchhhhceeeec-CHHHHHHHHHhhccCC------------CCCcCHHHHHHHHHHhcCHHHHHH
Confidence 1122577888999832 4445898664 4444332211111000 00011224555544453 355778
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCC---CCCeEEEEecCCCHHHH
Q 009181 412 NTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQ---RPNSIHICVTLQHVAVV 488 (541)
Q Consensus 412 ~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~---~~~~iRi~~~~~~~e~i 488 (541)
..++..++++++.+.|++. ++++. ++..+++++..++.+..++.+.|.++|+.+..++ .++++|++++ +.+++
T Consensus 265 ~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~--~~~~~ 340 (353)
T PRK05387 265 TRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHPSHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG--TDEEM 340 (353)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC--CHHHH
Confidence 8888889999999999987 77754 5566777777766678899999999998775443 2468999997 45899
Q ss_pred HHHHHHHHHHHH
Q 009181 489 DVFLRDLRESVE 500 (541)
Q Consensus 489 d~~i~~L~~~~~ 500 (541)
+++++.|++++.
T Consensus 341 ~~~~~~L~~~~~ 352 (353)
T PRK05387 341 EALVDALKEILA 352 (353)
T ss_pred HHHHHHHHHHhh
Confidence 999999998753
No 107
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.90 E-value=3.9e-21 Score=200.53 Aligned_cols=301 Identities=17% Similarity=0.193 Sum_probs=210.3
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
..|....+..++.+.+.+++.+.+|.+ +++ ++ ++|+|+++++..++.++.+ +| ++|+++.++|+.
T Consensus 61 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~---~v--i~t~G~~~~l~~~~~~~~~-----~g---d~vlv~~P~y~~ 127 (383)
T TIGR03540 61 HRYPSYEGMLAYRQAVADWYKRRFGVELDPET---EV--LSLIGSKEGIAHIPLAFVN-----PG---DIVLVPDPGYPV 127 (383)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCC---eE--EECCCcHHHHHHHHHHhCC-----CC---CEEEEeCCCCcc
Confidence 345445566788888888888887774 322 25 7899999999999988753 66 899999999999
Q ss_pred HHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcc
Q 009181 239 YDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~g 313 (541)
+..+++.+|++++.+|+++ ++.+|++++++++.+++++|++++|+||||.+.+ +++|+++|++|++++++|++|+
T Consensus 128 ~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~ 207 (383)
T TIGR03540 128 YRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYS 207 (383)
T ss_pred hHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchh
Confidence 9999999999999999974 4678999999999889999999999999999988 7899999999999999999998
Q ss_pred cchhhhhhhcCCCCCCC-CcC-CCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCC
Q 009181 314 GFVLPFAKKLGYPIPPF-DFS-VQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSR 389 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~-~~~-~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr 389 (541)
.+... +...+.+ ... .....+...++.|. ++..| +|+++. ++++..........+..+ -
T Consensus 208 ~l~~~-----~~~~~~~~~~~~~~~~~i~~~SfSK~-~g~~GlRiG~~i~-~~~l~~~~~~~~~~~~~~----------~ 270 (383)
T TIGR03540 208 EITFD-----GYKAPSFLEVDGAKDVGIEFHSLSKT-YNMTGWRIGMAVG-NADLIAGLGKVKTNVDSG----------V 270 (383)
T ss_pred hhccC-----CCCCcCcccCCCcccCEEEEEecccc-cCCccceeeEEeC-CHHHHHHHHHHHHhcccC----------C
Confidence 65431 1101111 111 11234556677898 55555 898654 454443221111111000 0
Q ss_pred CCchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-CCHHHHHHHHH-hCCc
Q 009181 390 PGGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-VDIFEVNDIMS-SKGW 465 (541)
Q Consensus 390 ~~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~~~~~l~~~l~-~~G~ 465 (541)
+ ...+.++...+ +.+.+++..+...++++.+.+.|++. ++.+..+....++++..++ .+..++.+.|. ++|+
T Consensus 271 ~---~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi 346 (383)
T TIGR03540 271 F---QAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPKATFYVWVPVPEGYTSAEFAARLLEETGV 346 (383)
T ss_pred C---hHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCCcceEEEEECCCCCCHHHHHHHHHHHCCE
Confidence 0 11233333333 34566777888889999999999987 7887755455556777653 46788888875 6787
Q ss_pred eecc---CC--CCCeEEEEecCCCHHHHHHHHHHHH
Q 009181 466 HLNP---LQ--RPNSIHICVTLQHVAVVDVFLRDLR 496 (541)
Q Consensus 466 ~~~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~ 496 (541)
.+.. ++ .++++|++++. +.+++++.++.|+
T Consensus 347 ~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~ 381 (383)
T TIGR03540 347 VVTPGVGFGEYGEGYIRISLTV-PDERLEEAVARIK 381 (383)
T ss_pred EEecchhhCccCCCeEEEEecC-CHHHHHHHHHHHh
Confidence 6543 22 24689999974 4566676666654
No 108
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.90 E-value=4.1e-21 Score=200.53 Aligned_cols=301 Identities=16% Similarity=0.173 Sum_probs=209.2
Q ss_pred CcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH
Q 009181 162 HLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (541)
Q Consensus 162 ~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~ 239 (541)
.|....+..++.+.+.+++.+.+|.+ +++ ++ ++|+|+++++..++.++.+ +| ++|++++++|+.+
T Consensus 64 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---~i--i~t~G~~~~i~~~~~~~~~-----~g---d~Vl~~~P~y~~~ 130 (385)
T PRK09276 64 QYPSYEGMLEFRKAVADWYKRRFGVELDPET---EV--ISLIGSKEGIAHIPLAFVN-----PG---DVVLVPDPGYPVY 130 (385)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC---cE--EEccCcHHHHHHHHHHhCC-----CC---CEEEEcCCCCcCh
Confidence 34434456677887888888777753 332 25 7899999999999988753 67 8999999999999
Q ss_pred HHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCccc
Q 009181 240 DKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGG 314 (541)
Q Consensus 240 ~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg 314 (541)
..+++..|++++.+|.++ ++.+|++++++++.+++++|++++|+||||.+.+ +++|+++|++|++++++|++|+.
T Consensus 131 ~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~ 210 (385)
T PRK09276 131 KIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSE 210 (385)
T ss_pred HHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhh
Confidence 999999999999999964 4678999999999889999999999999999987 57899999999999999999987
Q ss_pred chhhhhhhcCCCCCCCC-c-CCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCC
Q 009181 315 FVLPFAKKLGYPIPPFD-F-SVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 315 ~~~~f~~~~g~~~p~~~-~-~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~ 390 (541)
+... +...+.+. + ...+..+...++.|. ++..| +|+++. ++++..........+..
T Consensus 211 ~~~~-----~~~~~~~~~~~~~~~~~i~~~S~SK~-~g~~GlRiG~~i~-~~~l~~~~~~~~~~~~~------------- 270 (385)
T PRK09276 211 IAYD-----GYKPPSFLEVPGAKDVGIEFHSLSKT-YNMTGWRIGFAVG-NADLIAGLGKVKSNVDS------------- 270 (385)
T ss_pred eecC-----CCCCCChhccCCCcCCEEEEecchhh-cCCcchhheeeeC-CHHHHHHHHHHHhhccC-------------
Confidence 6431 11011111 1 112345666778898 55555 898764 44443322111110000
Q ss_pred CchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-CCHHHHHHHHH-hCCce
Q 009181 391 GGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-VDIFEVNDIMS-SKGWH 466 (541)
Q Consensus 391 ~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~~~~~l~~~l~-~~G~~ 466 (541)
+.....+.++...+ ....+++..+++.++++++.+.|++. ++++..+....++++..++ .+..++.+.|. ++|+.
T Consensus 271 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~ 349 (385)
T PRK09276 271 GVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLEVEPPKATFYVWAPVPKGYTSAEFATLLLDKAGVV 349 (385)
T ss_pred CCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEECCCCCCHHHHHHHHHHhCCEE
Confidence 00112344444444 24556777888888899999999987 7776644444446777654 47788888876 57876
Q ss_pred eccC---C--CCCeEEEEecCCCHHHHHHHHHHHHH
Q 009181 467 LNPL---Q--RPNSIHICVTLQHVAVVDVFLRDLRE 497 (541)
Q Consensus 467 ~~~~---~--~~~~iRi~~~~~~~e~id~~i~~L~~ 497 (541)
+... + .++++|++++. ..+++.+.+++|.+
T Consensus 350 v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 384 (385)
T PRK09276 350 VTPGNGFGEYGEGYFRIALTV-PDERIEEAVERIKK 384 (385)
T ss_pred ECCchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHhh
Confidence 5442 2 24689999984 45677776666643
No 109
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.90 E-value=4.8e-21 Score=200.29 Aligned_cols=308 Identities=13% Similarity=0.174 Sum_probs=210.6
Q ss_pred CcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH
Q 009181 162 HLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (541)
Q Consensus 162 ~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~ 239 (541)
.|....+..++++.+.+++...+|.+ +.+ ++ ++|+|+++++.+++.++.. +| ++|+++.+.|+.+
T Consensus 62 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~---~i--~it~G~~~al~~~~~~~~~-----~g---d~vl~~~p~y~~~ 128 (391)
T PRK07309 62 HYTGMAGLLELRQAAADFVKEKYNLDYAPEN---EI--LVTIGATEALSASLTAILE-----PG---DKVLLPAPAYPGY 128 (391)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC---cE--EEeCChHHHHHHHHHHhcC-----CC---CEEEEeCCCCcch
Confidence 34444566788888888888777763 222 36 8999999999999888743 56 8999999999999
Q ss_pred HHHHhhcCCeEEEeeCCC-CCccCHHHHHHhhcc---CceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCc
Q 009181 240 DKAAQYFNIKLWRVPVDK-EFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCL 312 (541)
Q Consensus 240 ~ka~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~~---~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~ 312 (541)
...++..|++++.+|+++ ++.+|++++++++++ +++++++++|+||||.+.+ +++|+++|++|++++++|++|
T Consensus 129 ~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y 208 (391)
T PRK07309 129 EPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVY 208 (391)
T ss_pred HHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccc
Confidence 999999999999999876 568999999999864 6889999999999999865 889999999999999999999
Q ss_pred ccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCC
Q 009181 313 GGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG 391 (541)
Q Consensus 313 gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~ 391 (541)
+.+... +...+++.-....-.++..+++|.. ..+..+|+++.. +++....... ..|... ..+
T Consensus 209 ~~~~~~-----~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~-~~~~~~~~~~-~~~~~~-------~~~--- 271 (391)
T PRK07309 209 SELTYT-----GEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAP-AEFTAQLIKS-HQYLVT-------AAT--- 271 (391)
T ss_pred cceeeC-----CCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeC-HHHHHHHHHH-Hhhccc-------CCC---
Confidence 866531 1001111101122346677899983 244448986654 4443322111 111100 001
Q ss_pred chHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC---CHHHHHHHH-HhCCc
Q 009181 392 GLIAGAWAALMSLG--QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV---DIFEVNDIM-SSKGW 465 (541)
Q Consensus 392 ~~~a~~~~al~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~---~~~~l~~~l-~~~G~ 465 (541)
...+.++...+. ........++..+.++++.+.|++. ++++..+....+++++.++. +..++.+.+ .++|+
T Consensus 272 --~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv 348 (391)
T PRK07309 272 --TMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAV 348 (391)
T ss_pred --hHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCE
Confidence 123444444442 2333455666777888899999887 77766443344455565532 456778764 56787
Q ss_pred eeccC---C--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 466 HLNPL---Q--RPNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 466 ~~~~~---~--~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
.+... + .++++|++++. ..+++++.+++|++++++++
T Consensus 349 ~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l~~~~~~~~ 390 (391)
T PRK07309 349 AFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRLKEYMEEHA 390 (391)
T ss_pred EEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhhc
Confidence 65431 1 24799999986 45899999999999887653
No 110
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.90 E-value=3.3e-21 Score=202.26 Aligned_cols=321 Identities=15% Similarity=0.133 Sum_probs=219.7
Q ss_pred HHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCC
Q 009181 148 INEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGIT 225 (541)
Q Consensus 148 ~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~ 225 (541)
+.+++...+.....+|....|..++.+++.+++.+.+|.+ +++ + ++|+|+++|+..++.+..+ +|
T Consensus 51 ~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~----i--~~t~G~~~al~~~~~~~~~-----~g-- 117 (402)
T PRK06107 51 IKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNE----I--TVGGGAKQAIFLALMATLE-----AG-- 117 (402)
T ss_pred HHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhh----E--EEeCCHHHHHHHHHHHhcC-----CC--
Confidence 3444444333333456556677788888999999888874 333 6 8999999999999887542 66
Q ss_pred CCeEEecCCccchHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHH
Q 009181 226 RPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELAL 300 (541)
Q Consensus 226 ~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~ 300 (541)
+.|+++.+.|+.+..++...+.+++.+++++ ++.+|+++++++++++++++++++|+||||.+.+ +++|+++|+
T Consensus 118 -d~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~ 196 (402)
T PRK06107 118 -DEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLL 196 (402)
T ss_pred -CEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHH
Confidence 8999999999999888888899888888853 5679999999999989999999999999998876 677888899
Q ss_pred Hc-CCEEEEeCCcccchhhhhhhcCCCCCCCCc---CCCCceEEEeCCCCCCC-CCCCceEEEEeccccccccccccccc
Q 009181 301 SH-GTCLHVDLCLGGFVLPFAKKLGYPIPPFDF---SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEW 375 (541)
Q Consensus 301 ~~-~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~---~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~ 375 (541)
+| ++++++|++|+.+... . ...|.+.. ...+-.++..+++|... .+..+|+++. ++++..........+
T Consensus 197 ~~~~~~iI~De~y~~l~~~--~---~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~-~~~~~~~~~~~~~~~ 270 (402)
T PRK06107 197 RHPHVLVLTDDIYDHIRFD--D---EPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAG-PADLIAAINKLQSQS 270 (402)
T ss_pred HcCCeEEEEehhccccccC--C---CCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeec-CHHHHHHHHHHHHhc
Confidence 98 9999999999855331 1 00111111 11123455678899942 3344798654 444443221111100
Q ss_pred CCCccCCCcccCCCCCchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC---
Q 009181 376 SGGLYVSPTVAGSRPGGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV--- 450 (541)
Q Consensus 376 ~~~~~~~~~~~gsr~~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~--- 450 (541)
. ... ....++++...+ +....++..+...++++.+.+.|++++++.+..+.....++++...
T Consensus 271 ~-----------~~~--s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~ 337 (402)
T PRK06107 271 S-----------SCP--SSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIG 337 (402)
T ss_pred c-----------cCC--ChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeecccccc
Confidence 0 001 122555555555 3456677778888889999999988878776644444445555421
Q ss_pred ---------CCHHHHHHHH-HhCCceecc---CCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 451 ---------VDIFEVNDIM-SSKGWHLNP---LQRPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 451 ---------~~~~~l~~~l-~~~G~~~~~---~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
.+..++...+ .++|+.+.. ++.++++|++++. +.+++++.+++|++.++++
T Consensus 338 ~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~-~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 338 KTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT-SLETLEEACARIERAVAAL 401 (402)
T ss_pred cccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHhc
Confidence 1345666554 567876543 3446899999995 5699999999999988764
No 111
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.90 E-value=3.3e-21 Score=201.96 Aligned_cols=321 Identities=15% Similarity=0.114 Sum_probs=216.5
Q ss_pred HHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCC---CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC
Q 009181 147 LINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNK---EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (541)
Q Consensus 147 ~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~---~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G 223 (541)
.+.+++...+. ....|....+..++.+.+.+++.+.+|.+ +++ ++ ++|+|+++++..+++++.+ +|
T Consensus 46 ~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~---~i--~it~G~~~al~~~~~~l~~-----~~ 114 (396)
T PRK09147 46 FIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDPAT---QV--LPVNGSREALFAFAQTVID-----RD 114 (396)
T ss_pred HHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccc---eE--EECCChHHHHHHHHHHHcC-----CC
Confidence 34444443332 23445555667788888888988888854 332 26 8999999999999998864 41
Q ss_pred CCCCeEEecCCccchHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHH
Q 009181 224 ITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGEL 298 (541)
Q Consensus 224 i~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~l 298 (541)
...++|+++.+.++.+..+++.+|++++.||+++ ++.+|++++++++.++++++++++|+||||.+.+ +++|.++
T Consensus 115 ~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~ 194 (396)
T PRK09147 115 GPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFAL 194 (396)
T ss_pred CCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHH
Confidence 1128899999999999999999999999999974 4689999999988889999999999999999976 7788899
Q ss_pred HHHcCCEEEEeCCcccchhhhhhhcCCCCCCC------CcCCCCceEEEeCCCC-CCCCCCCceEEEEeccccccccccc
Q 009181 299 ALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF------DFSVQGVTSISVDVHK-YGLAPKGTSVVLYRNREIRKHQFVA 371 (541)
Q Consensus 299 a~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~------~~~~~gvdsis~~~hK-~~~~p~g~g~ll~~~~~~~~~~~~~ 371 (541)
|++|++++++|++|+.+... ... ...+.+ +.....-.++..++.| ++.++..+|+++.. +++.......
T Consensus 195 a~~~~~~ii~De~y~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~-~~l~~~~~~~ 270 (396)
T PRK09147 195 SDRYGFVIASDECYSEIYFD--EAA-PPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGD-AALLKKFLLY 270 (396)
T ss_pred HHHcCeEEEeeccccccccC--CCC-CCchhhhhccccCccccccEEEEeccccccCCccceeeeecCC-HHHHHHHHHH
Confidence 99999999999999876531 100 000000 0001122467778899 46677779986654 4433221111
Q ss_pred ccccCCCccCCCcccCCCCCchHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC
Q 009181 372 VTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG-QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV 450 (541)
Q Consensus 372 ~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~ 450 (541)
.. +. +... ....+.+++..+. .+.+++..+.+.+.++.+.+.|++. +.+..+..+.+++++++
T Consensus 271 ~~-~~----------~~~~--~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~~g~f~~~~~~- 334 (396)
T PRK09147 271 RT-YH----------GCAM--PPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV--LDVQLPDAGFYLWAKVP- 334 (396)
T ss_pred hh-hc----------ccCC--CHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCCeeEEEEEECC-
Confidence 10 00 0000 0123444333332 3456677777888888888888764 44444555677777775
Q ss_pred CCHHHHHHHHH-hCCceecc---C--------CCCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 009181 451 VDIFEVNDIMS-SKGWHLNP---L--------QRPNSIHICVTLQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 451 ~~~~~l~~~l~-~~G~~~~~---~--------~~~~~iRi~~~~~~~e~id~~i~~L~~~~ 499 (541)
.+..++.+.|. ++|+.+.. + ...+++|++++. +.+++++.+++|++++
T Consensus 335 ~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 335 GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA-PLAECVEAAERIVDFC 394 (396)
T ss_pred CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 45677888775 67875532 1 114789999985 4688888888888765
No 112
>PRK07550 hypothetical protein; Provisional
Probab=99.90 E-value=6e-21 Score=199.30 Aligned_cols=305 Identities=17% Similarity=0.157 Sum_probs=214.1
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
..|...++..++++.+.+++.+..|.. +++ + ++|+|+++++.+++.++.. +| ++|+++.+.|+.
T Consensus 61 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~----i--~~t~G~~~al~~~~~~l~~-----~g---d~Vlv~~p~y~~ 126 (386)
T PRK07550 61 HLYGPVEGLPELREAYAAHYSRLYGAAISPEQ----V--HITSGCNQAFWAAMVTLAG-----AG---DEVILPLPWYFN 126 (386)
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHhCCCCCcce----E--EEecCcHHHHHHHHHHhcC-----CC---CEEEEcCCCCcc
Confidence 345455678888888888988887754 443 6 8999999999998888753 66 899999999999
Q ss_pred HHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcc
Q 009181 239 YDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~g 313 (541)
+...++..|++++.++.++ ++.+|++++++++++++++|++++|+||||.+.+ +++|+++|++||+++++|++|+
T Consensus 127 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~ 206 (386)
T PRK07550 127 HKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYR 206 (386)
T ss_pred hHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccch
Confidence 9999999999999999974 5678999999999999999999999999999876 7899999999999999999998
Q ss_pred cchhhhhhhcCCCCCCCCcCCCC-ceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCC
Q 009181 314 GFVLPFAKKLGYPIPPFDFSVQG-VTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG 391 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~~~~~~g-vdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~ 391 (541)
.+.. . .+...+.+.....+ -.....+++|... .+.++|+++..+ +...........+ ....+
T Consensus 207 ~~~~---~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~-~~~~~~~~~~~~~--------~~~~s--- 270 (386)
T PRK07550 207 DFDS---G-GGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASP-ARIAEIEKFMDTV--------AICAP--- 270 (386)
T ss_pred hhcc---C-CCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCH-HHHHHHHHHHhhc--------ccCCC---
Confidence 6532 1 11101111111112 2455678899843 455689877644 3332211111111 00111
Q ss_pred chHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC--CCHHHHHHHHH-hCCce
Q 009181 392 GLIAGAWAALMSLG--QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV--VDIFEVNDIMS-SKGWH 466 (541)
Q Consensus 392 ~~~a~~~~al~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~--~~~~~l~~~l~-~~G~~ 466 (541)
..+++++...+. .+..++..+.+.++++++.+.|++.+++.+. ++...++++..+. .+..++.+.|. ++|+.
T Consensus 271 --~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~ 347 (386)
T PRK07550 271 --RIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELL-ASGAYFAYVRHPFPDRPSREVARRLAKEAGIL 347 (386)
T ss_pred --cHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-CCceEEEEecCCCCCCCHHHHHHHHHHhcCEE
Confidence 123444433332 3445566677788888999999887676543 4455666776653 47889998875 57876
Q ss_pred ecc---CC--CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 009181 467 LNP---LQ--RPNSIHICVTLQHVAVVDVFLRDLRES 498 (541)
Q Consensus 467 ~~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~~~ 498 (541)
+.. ++ ..+++|++++..+.+++++++++|++.
T Consensus 348 v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 348 CLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred EeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 643 11 246899999876678999999988764
No 113
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.90 E-value=1.2e-21 Score=204.32 Aligned_cols=291 Identities=19% Similarity=0.250 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCC
Q 009181 169 VARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNI 248 (541)
Q Consensus 169 ~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~ 248 (541)
...+..++++++++++|.+ . . +++++|++++..+++++. ++| ++|+++.+.|+++..+++..|+
T Consensus 82 ~~~~~~~l~~~la~~~~~~-~-----~--i~~~~g~~~~~~~l~~~~-----~~g---d~V~~~~~~~~~~~~~~~~~g~ 145 (385)
T PRK05958 82 NSPAHEALEEELAEWFGAE-R-----A--LLFSSGYAANLAVLTALA-----GKG---DLIVSDKLNHASLIDGARLSRA 145 (385)
T ss_pred CcHHHHHHHHHHHHHhCCC-c-----E--EEECcHHHHHHHHHHHhC-----CCC---CEEEEeCccCHHHHHHHHhcCC
Confidence 3455667888999999853 2 2 667778888887776553 366 8999999999999999999999
Q ss_pred eEEEeeCCCCCccCHHHHHHhhcc---CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCC
Q 009181 249 KLWRVPVDKEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGY 325 (541)
Q Consensus 249 ~v~~v~~~~~~~~d~~~Le~~i~~---~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~ 325 (541)
+++.++.. |++++++++++ ++.++++.++++++|...++++|+++|++||+++++|++|+.+.++ ..|.
T Consensus 146 ~~~~~~~~-----d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~---~~g~ 217 (385)
T PRK05958 146 RVRRYPHN-----DVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLG---PQGR 217 (385)
T ss_pred ceEEeCCC-----CHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccC---CCCC
Confidence 99988763 88999999975 3677888889999999999999999999999999999999755432 1111
Q ss_pred CCCC-CCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHH
Q 009181 326 PIPP-FDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL 404 (541)
Q Consensus 326 ~~p~-~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l 404 (541)
..+. +.......+++..++||+ +++.| |+++ .++++..........+. ..++......++..++++.+
T Consensus 218 ~~~~~~~~~~~~~~i~~~s~sK~-~~~~G-g~~~-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~aa~~aal~~~ 286 (385)
T PRK05958 218 GLAAEAGLAGEPDVILVGTLGKA-LGSSG-AAVL-GSETLIDYLINRARPFI--------FTTALPPAQAAAARAALRIL 286 (385)
T ss_pred chHHhhCCCCCCceEEEEechhh-cccCC-cEEE-cCHHHHHHHHHhCccce--------ecCCCCHHHHHHHHHHHHHH
Confidence 0101 111112235677889999 56666 6544 44444322111111110 00111112234555666554
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-CCHHHHHHHHHhCCceeccCC------CCCeEE
Q 009181 405 GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-VDIFEVNDIMSSKGWHLNPLQ------RPNSIH 477 (541)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~~~~~l~~~l~~~G~~~~~~~------~~~~iR 477 (541)
... .+..+++.++++++.+.|++. ++++. ++..++++|..++ .+..++.+.|.++|+.+.... .++++|
T Consensus 287 ~~~--~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lR 362 (385)
T PRK05958 287 RRE--PERRERLAALIARLRAGLRAL-GFQLM-DSQSAIQPLIVGDNERALALAAALQEQGFWVGAIRPPTVPAGTSRLR 362 (385)
T ss_pred hcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCCHHHHHHHHHHHHHCCceEecccCCCCCCCCceEE
Confidence 322 567888899999999999986 67654 4567788887754 256689999999998775421 135899
Q ss_pred EEecCCCH-HHHHHHHHHHHHH
Q 009181 478 ICVTLQHV-AVVDVFLRDLRES 498 (541)
Q Consensus 478 i~~~~~~~-e~id~~i~~L~~~ 498 (541)
++++..++ ++++++++.|+++
T Consensus 363 is~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 363 ITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred EEecCCCCHHHHHHHHHHHHhc
Confidence 99986555 9999999999875
No 114
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.90 E-value=4.4e-21 Score=205.59 Aligned_cols=313 Identities=12% Similarity=0.120 Sum_probs=212.6
Q ss_pred CCCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc
Q 009181 160 PLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (541)
Q Consensus 160 ~~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~ 237 (541)
...|....|..++.+.+.+++.+..|.+ +++ | ++|+|+++++.++++++.. .+| |+|+++.+.|+
T Consensus 108 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~----I--~it~Ga~~al~~~~~~l~~----~~g---D~Vlv~~P~y~ 174 (481)
T PTZ00377 108 TGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSD----I--FLTDGASSGIKLLLQLLIG----DPS---DGVMIPIPQYP 174 (481)
T ss_pred ccCcCcccCCHHHHHHHHHHHHHhcCCCCChhh----E--EEcCCHHHHHHHHHHHhcc----CCC---CEEEECCCCch
Confidence 3456667788888888888888776754 443 7 8999999999999998751 166 99999999999
Q ss_pred hHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhcc------CceEEEeecCCCCCccccC---HHHHHHHHHHcCCEE
Q 009181 238 AYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCL 306 (541)
Q Consensus 238 s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~l 306 (541)
.+...++..|++++.||+++ ++.+|+++|++++++ +++++++++|+||||.+.+ +++|+++|++|++++
T Consensus 175 ~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~i 254 (481)
T PTZ00377 175 LYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVL 254 (481)
T ss_pred hHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEE
Confidence 99999999999999999974 468999999999975 7889999999999999988 889999999999999
Q ss_pred EEeCCcccchhhhhhhcCCCCCCC-----CcCCC---Cc-eEEEeCCCCCCC--CCCCceEEEEe--ccccccccccccc
Q 009181 307 HVDLCLGGFVLPFAKKLGYPIPPF-----DFSVQ---GV-TSISVDVHKYGL--APKGTSVVLYR--NREIRKHQFVAVT 373 (541)
Q Consensus 307 hvD~a~gg~~~~f~~~~g~~~p~~-----~~~~~---gv-dsis~~~hK~~~--~p~g~g~ll~~--~~~~~~~~~~~~~ 373 (541)
++|++|+.+.+. . +.+.+.+ +.... +. .++..++.|.++ ++..+|+++.. ++++.........
T Consensus 255 I~De~Y~~l~~~--~--~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~ 330 (481)
T PTZ00377 255 MADEVYQENIYD--G--EKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLAS 330 (481)
T ss_pred EEehhhHhhccC--C--CCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhh
Confidence 999999865430 0 0000010 00111 22 244558899644 46668987762 4544432211111
Q ss_pred ccCCCccCCCcccCCCCCchHHHHHHHHHHHh-----H-------HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCe
Q 009181 374 EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG-----Q-------EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDM 441 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg-----~-------~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~ 441 (541)
.+ .+.+ ..++.++...+. . ...++..++..++++.+.+.|++++++++..+...
T Consensus 331 ~~---------~~~~-----~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg 396 (481)
T PTZ00377 331 IN---------LCSN-----VVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGA 396 (481)
T ss_pred ee---------cCCC-----hHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCee
Confidence 00 0001 224555544441 1 11233333457778889999999889887744344
Q ss_pred eEEEEecC--CC-----------CHHHH-HHHHHhCCceecc---CC---CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 442 TIVAFGSD--VV-----------DIFEV-NDIMSSKGWHLNP---LQ---RPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 442 ~~v~f~~~--~~-----------~~~~l-~~~l~~~G~~~~~---~~---~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
..++++.. .. +..++ ...+.++|+.+.. ++ .++++|+|++ .+.+++++.+++|+++++.
T Consensus 397 ~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 397 MYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHES 475 (481)
T ss_pred EEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHH
Confidence 44443432 10 12233 3556677865532 22 2358999998 5568999999999999987
Q ss_pred HHc
Q 009181 502 VKQ 504 (541)
Q Consensus 502 l~~ 504 (541)
.++
T Consensus 476 ~~~ 478 (481)
T PTZ00377 476 FMK 478 (481)
T ss_pred HHH
Confidence 764
No 115
>PRK12414 putative aminotransferase; Provisional
Probab=99.90 E-value=2.9e-21 Score=201.41 Aligned_cols=300 Identities=12% Similarity=0.110 Sum_probs=209.4
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
..|...++...+.+++.+++++++|.+ +.+ ++ ++|+|+++++..++.++.+ +| ++|+++.+.|..
T Consensus 60 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~---~i--~it~g~~~al~~~~~~l~~-----~g---d~Vlv~~p~y~~ 126 (384)
T PRK12414 60 NQYAPMAGIAALREALAEKTERLYGARYDPAS---EV--TVIASASEGLYAAISALVH-----PG---DEVIYFEPSFDS 126 (384)
T ss_pred CCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCC---cE--EEECChHHHHHHHHHHhcC-----CC---CEEEEeCCCccc
Confidence 345455677888889999999999985 222 25 8999999999999988753 66 899999999999
Q ss_pred HHHHHhhcCCeEEEeeCCC-CCccCHHHHHHhhccCceEEEeecCCCCCcccc---CHHHHHHHHHHcCCEEEEeCCccc
Q 009181 239 YDKAAQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIID---PIQELGELALSHGTCLHVDLCLGG 314 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id---~i~~I~~la~~~~i~lhvD~a~gg 314 (541)
+...++..|++++.+|+++ ++.+|+++|++++++++++|++++|+||||.+. ++++|+++|++||+++++|++|+.
T Consensus 127 ~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~ 206 (384)
T PRK12414 127 YAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEH 206 (384)
T ss_pred hHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhh
Confidence 9999999999999999975 678999999999998999999999999999985 588899999999999999999986
Q ss_pred chhhhhhhcCCCCCCCC-c-CCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccc--cccCCCccCCCcccCCC
Q 009181 315 FVLPFAKKLGYPIPPFD-F-SVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAV--TEWSGGLYVSPTVAGSR 389 (541)
Q Consensus 315 ~~~~f~~~~g~~~p~~~-~-~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~~gsr 389 (541)
+... .. ..+++. + ...+-.++..+++|.+ ..+..+|+++..+ ++........ ..|. .+
T Consensus 207 ~~~~--~~---~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~-~l~~~l~~~~~~~~~~----------~s- 269 (384)
T PRK12414 207 VVFD--GA---RHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA-ELMDEIRKVHQFMVFS----------AD- 269 (384)
T ss_pred ccCC--CC---CccCcccCcCccCcEEEEecccccccCccceEEEEecCH-HHHHHHHHHHhheecC----------CC-
Confidence 5431 10 011111 1 1122246777889984 2455589876654 3332211111 1111 01
Q ss_pred CCchHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCee-EEEEecCC---CCHHHHH-HHHHhC
Q 009181 390 PGGLIAGAWAALMSLGQ-EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMT-IVAFGSDV---VDIFEVN-DIMSSK 463 (541)
Q Consensus 390 ~~~~~a~~~~al~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-~v~f~~~~---~~~~~l~-~~l~~~ 463 (541)
...++++...+.. ..+.+..+.+.++++++.+.|++. ++++. ++..+ ++++++++ .+..++. +.+.++
T Consensus 270 ----~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~ 343 (384)
T PRK12414 270 ----TPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELL-PSEGSFFMLARFRHFSDESDSDFVLRLIRDA 343 (384)
T ss_pred ----cHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCcceEEEEcccccCCCCHHHHHHHHHHhC
Confidence 2245555554532 234566777788889999999987 77765 44444 44445543 2344555 566778
Q ss_pred Cceecc---CC---C-CCeEEEEecCCCHHHHHHHHHHHHH
Q 009181 464 GWHLNP---LQ---R-PNSIHICVTLQHVAVVDVFLRDLRE 497 (541)
Q Consensus 464 G~~~~~---~~---~-~~~iRi~~~~~~~e~id~~i~~L~~ 497 (541)
|+.+.. ++ . .+++|++++. ..+++++.+++|.+
T Consensus 344 gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~ 383 (384)
T PRK12414 344 RVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS 383 (384)
T ss_pred CEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 976543 21 1 3689999996 45888888888764
No 116
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.90 E-value=8.8e-22 Score=201.61 Aligned_cols=299 Identities=15% Similarity=0.081 Sum_probs=216.0
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCc-HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch--HHHH
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSG-GTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YDKA 242 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~G-gt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s--~~ka 242 (541)
.+...++-+++++.++++++.+.+. ++ ++++| ||+|+..++..+.. +| +++++.....++ +.+.
T Consensus 32 ~~~f~~~~~~~~~~l~~l~~~~~~~---~v--~~~~gsgT~a~ea~~~nl~~-----~~---~~~l~i~~G~fg~r~~~~ 98 (349)
T TIGR01364 32 SKEFEAVANEAESDLRELLNIPDNY---EV--LFLQGGATGQFAAVPLNLLA-----EG---KVADYIVTGAWSKKAAKE 98 (349)
T ss_pred chHHHHHHHHHHHHHHHHhCCCCCc---eE--EEEcCCchHHHHHHHHhcCC-----CC---CeEEEEECCHHHHHHHHH
Confidence 3556678888999999999985443 24 67766 99999999998753 34 556555555554 5678
Q ss_pred HhhcCCeEEEeeCCCCC----ccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhh
Q 009181 243 AQYFNIKLWRVPVDKEF----RADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLP 318 (541)
Q Consensus 243 ~~~~G~~v~~v~~~~~~----~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~ 318 (541)
++.+|+ +..++.++.+ .+|+++++ +++++.+|.+++..|.||+..| ++++.++++++||++++.+..
T Consensus 99 a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~- 169 (349)
T TIGR01364 99 AKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSR- 169 (349)
T ss_pred HHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCc-
Confidence 888899 8877765322 35666555 4568899999999999999876 777778999999999765544
Q ss_pred hhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccc--cccccCCCccCCCcccCCCCCchHHH
Q 009181 319 FAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFV--AVTEWSGGLYVSPTVAGSRPGGLIAG 396 (541)
Q Consensus 319 f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~gsr~~~~~a~ 396 (541)
++++.. .|++.+++||+ ++|+|.|+++++++.+.+..-. ...+|... .......|+.+-..+++
T Consensus 170 ----------~id~~~--~d~~~~ssqK~-lgP~Glg~l~~s~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Tp~~~~i~a 235 (349)
T TIGR01364 170 ----------PIDVSK--FGLIYAGAQKN-IGPAGLTVVIVRKDLLGRASRITPSMLNYKIH-AENDSMYNTPPTFAIYV 235 (349)
T ss_pred ----------cCCHHH--ccEEEEecccc-cCCCceEEEEECHHHHhhcccCCCCcchHHHH-HhcCCCCCCCcHHHHHH
Confidence 344443 46999999998 6799999988877654321110 01111100 00112235666677889
Q ss_pred HHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHhhcCCCeEEecC-C---CeeEEEEecCCCC-HHHHHHHHHhCCceeccC
Q 009181 397 AWAALMSLGQE-GYLENTKAIMEVSESIQKGIKEIPELFIIGR-P---DMTIVAFGSDVVD-IFEVNDIMSSKGWHLNPL 470 (541)
Q Consensus 397 ~~~al~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~---~~~~v~f~~~~~~-~~~l~~~l~~~G~~~~~~ 470 (541)
+.++++++..+ |++++.++...+++++++.|++++|+..... + ...+++|..++.. ..++.+.+.++|+.....
T Consensus 236 l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~ 315 (349)
T TIGR01364 236 SGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKG 315 (349)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCC
Confidence 99999999888 7999999999999999999999988765532 2 2357888877532 256667888899844333
Q ss_pred C-CCCeEEEEecCCCH-HHHHHHHHHHHHHHH
Q 009181 471 Q-RPNSIHICVTLQHV-AVVDVFLRDLRESVE 500 (541)
Q Consensus 471 ~-~~~~iRi~~~~~~~-e~id~~i~~L~~~~~ 500 (541)
. ..+.+|+|+..+++ +|||+|++.|+++.+
T Consensus 316 ~~~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 316 HRSVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred ccccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 2 25789999988887 999999999998764
No 117
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.1e-20 Score=197.87 Aligned_cols=302 Identities=15% Similarity=0.144 Sum_probs=204.8
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
..|....|..++++.+.+++.+.+|.+ +++ ++ ++|+|+++++..++.++.+ +| ++|++++++|+.
T Consensus 67 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~---~i--~vt~G~~~al~~~~~~~~~-----~g---d~Vlv~~P~y~~ 133 (394)
T PRK05942 67 HGYPPFEGTASFRQAITDWYHRRYGVELDPDS---EA--LPLLGSKEGLTHLALAYVN-----PG---DVVLVPSPAYPA 133 (394)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCC---eE--EEccChHHHHHHHHHHhCC-----CC---CEEEEcCCCCcc
Confidence 345445667788888888888887754 332 24 7899999999999888753 67 999999999999
Q ss_pred HHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcc
Q 009181 239 YDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~g 313 (541)
+...+...|++++.+|+++ ++.+|+++++++++++++++++++|+||||.+.+ +++|.++|++||+++++|++|+
T Consensus 134 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~ 213 (394)
T PRK05942 134 HFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYA 213 (394)
T ss_pred hHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccch
Confidence 9998999999999999974 5679999999999999999999999999999987 7899999999999999999998
Q ss_pred cchhhhhhhcCCCCCC-CCcC-CCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCC
Q 009181 314 GFVLPFAKKLGYPIPP-FDFS-VQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~-~~~~-~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~ 390 (541)
.+.. . +...+. ..+. ..+..+...++.|.. .++.++|+++. ++++.............+ .+
T Consensus 214 ~~~~---~--~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~-~~~l~~~l~~~~~~~~~~----------~~ 277 (394)
T PRK05942 214 ELAF---D--GYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG-NRHIIQGLRTLKTNLDYG----------IF 277 (394)
T ss_pred hhcc---C--CCCCCChhhCCCccccEEEEecchhccCChhhheeeeec-CHHHHHHHHHHHhhcccC----------CC
Confidence 6643 1 100011 1111 123345566778963 35555998765 444433221111100000 00
Q ss_pred CchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-CCHHHHHHH-HHhCCce
Q 009181 391 GGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-VDIFEVNDI-MSSKGWH 466 (541)
Q Consensus 391 ~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~~~~~l~~~-l~~~G~~ 466 (541)
...+.++...+ ..+..++..++..++.+++.+.|++. ++.+..+....++++..++ .+..++... +.++|+.
T Consensus 278 ---~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~ 353 (394)
T PRK05942 278 ---SALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKATMYLWVPCPVGMGSTDFALNVLQKTGVV 353 (394)
T ss_pred ---HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeEEEEECCCCCCHHHHHHHHHHHCCEE
Confidence 11233333333 34566777888888899999999886 7776644333467777654 356677765 5578876
Q ss_pred ecc---C--CCCCeEEEEecCCCHHHHHHHHHHHH
Q 009181 467 LNP---L--QRPNSIHICVTLQHVAVVDVFLRDLR 496 (541)
Q Consensus 467 ~~~---~--~~~~~iRi~~~~~~~e~id~~i~~L~ 496 (541)
+.. + ..++++|+|++. ..+.+.+.+++|+
T Consensus 354 v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~ 387 (394)
T PRK05942 354 VTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLK 387 (394)
T ss_pred EeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHH
Confidence 633 2 124799999973 2344444444443
No 118
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.90 E-value=2.2e-21 Score=200.79 Aligned_cols=280 Identities=18% Similarity=0.186 Sum_probs=200.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEE-cCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEE
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNM-TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~-t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~ 252 (541)
.++++.+++++|.++++ + ++ |+|+++++..+++++.+ +| ++|+++.+.|+.+...++..|++++.
T Consensus 72 ~~lr~~ia~~~~~~~~~----i--~~~~~Ga~~~i~~~~~~~~~-----~g---d~vlv~~p~y~~~~~~~~~~g~~~~~ 137 (361)
T PRK00950 72 PELREALSKYTGVPVEN----I--IVGGDGMDEVIDTLMRTFID-----PG---DEVIIPTPTFSYYEISAKAHGAKPVY 137 (361)
T ss_pred HHHHHHHHHHhCCCHHH----E--EEeCCCHHHHHHHHHHHhcC-----CC---CEEEEcCCChHHHHHHHHHcCCEEEE
Confidence 44666888888988765 5 66 78889998888877642 56 88999999999999999999999999
Q ss_pred eeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCc
Q 009181 253 VPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (541)
Q Consensus 253 v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~ 332 (541)
+|.++++.+|+++++++++++++++++++|+||||.+.|.+++.++|+++|+++++|++|+.+.- . +.+.+..
T Consensus 138 ~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~---~----~~~~~~~ 210 (361)
T PRK00950 138 AKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAE---Y----DYTPLAL 210 (361)
T ss_pred eecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCc---c----chHHHHH
Confidence 99877889999999999988899999999999999999999999999999999999999976531 0 0101100
Q ss_pred CCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhH-HHH
Q 009181 333 SVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ-EGY 409 (541)
Q Consensus 333 ~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~-~g~ 409 (541)
.. .-.++..++.|. ++.+| +|+++.. +++..........|. ....++.++...+.. +.+
T Consensus 211 ~~-~~vi~~~S~SK~-~g~~GlRiG~~~~~-~~~~~~~~~~~~~~~---------------~~~~~~~~a~~~l~~~~~~ 272 (361)
T PRK00950 211 EY-DNLIIGRTFSKV-FGLAGLRIGYGFVP-EWLIDYYMRAKTPFS---------------LTRLSQAAAIAALSDKEYI 272 (361)
T ss_pred hc-CCEEEEEeehHh-hcCchhhcchhcCC-HHHHHHHHHhcCCCC---------------CCHHHHHHHHHHhcCHHHH
Confidence 11 123556678898 55444 7876653 333322111111111 012244444444433 345
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceecc---CC--CCCeEEEEecCCC
Q 009181 410 LENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP---LQ--RPNSIHICVTLQH 484 (541)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~---~~--~~~~iRi~~~~~~ 484 (541)
++..++..+.++++.+.|. +++. ++..+++++...+.+..++.+.|.++|+.+.. +. .++++|++++ +
T Consensus 273 ~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~--~ 345 (361)
T PRK00950 273 EKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTPMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG--T 345 (361)
T ss_pred HHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCCCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC--C
Confidence 6667777777777777664 4443 45667788887656788999999999977643 21 2468999988 4
Q ss_pred HHHHHHHHHHHHHHH
Q 009181 485 VAVVDVFLRDLRESV 499 (541)
Q Consensus 485 ~e~id~~i~~L~~~~ 499 (541)
.++++++++.|++++
T Consensus 346 ~~~~~~l~~~L~~il 360 (361)
T PRK00950 346 FEENERFLEILKEIV 360 (361)
T ss_pred HHHHHHHHHHHHHHh
Confidence 589999999998875
No 119
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.5e-20 Score=197.07 Aligned_cols=320 Identities=19% Similarity=0.233 Sum_probs=215.6
Q ss_pred HHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhC--CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC
Q 009181 147 LINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLG--NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI 224 (541)
Q Consensus 147 ~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g--~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi 224 (541)
.+.+++..... ....|....+..++.+.+.+++.. .| .++++ + ++|+|+++++.+++.++.+ +|
T Consensus 47 ~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~~~~----i--~~t~G~~~al~~~~~~l~~-----~g- 112 (397)
T PRK07568 47 VFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKK-WGIDVEPDE----I--LITNGGSEAILFAMMAICD-----PG- 112 (397)
T ss_pred HHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCCcce----E--EEcCChHHHHHHHHHHhcC-----CC-
Confidence 34444443322 223344445556666655555542 33 44444 6 8999999999999887643 66
Q ss_pred CCCeEEecCCccchHHHHHhhcCCeEEEeeCCC-C-Cc-cCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHH
Q 009181 225 TRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK-E-FR-ADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGEL 298 (541)
Q Consensus 225 ~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~-~-~~-~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~l 298 (541)
++|+++.+.|+.+...++..|++++.+++++ + +. .+++++++++++++.+|++++|+||||.+.+ +++|+++
T Consensus 113 --d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~ 190 (397)
T PRK07568 113 --DEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEI 190 (397)
T ss_pred --CEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHH
Confidence 8999999999988888899999999999863 3 33 3689999999999999999999999999875 7899999
Q ss_pred HHHcCCEEEEeCCcccchhhhhhhcCCCCCC-CCcCC-CCceEEEeCCCCCCC-CCCCceEEEEeccccccccccccc-c
Q 009181 299 ALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP-FDFSV-QGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVT-E 374 (541)
Q Consensus 299 a~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~-~~~~~-~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~-~ 374 (541)
|+++|+++++|++|+.+... +...+. ..+.. ..-.++..+++|... .+..+|+++..++++......... .
T Consensus 191 ~~~~~~~ii~De~y~~~~~~-----~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 265 (397)
T PRK07568 191 AKKHDLFLISDEVYREFVYD-----GLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQAR 265 (397)
T ss_pred HHHCCcEEEEeccchhcccC-----CCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhcc
Confidence 99999999999999876531 100111 11111 122356668899843 355689887765555432211110 1
Q ss_pred cCCCccCCCcccCCCCCchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCC
Q 009181 375 WSGGLYVSPTVAGSRPGGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVD 452 (541)
Q Consensus 375 ~~~~~~~~~~~~gsr~~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~ 452 (541)
|. .+ ...+.++...+ +...+++..+...+.++.+.+.|++++++.+..+....+++++.+..+
T Consensus 266 ~~----------~s-----~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~ 330 (397)
T PRK07568 266 LS----------PP-----TLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPVDD 330 (397)
T ss_pred CC----------CC-----cHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCCCC
Confidence 10 01 11333333333 345677778888899999999999887876554433445667776556
Q ss_pred HHHHHHHHHh------CCceecc---C----C-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 453 IFEVNDIMSS------KGWHLNP---L----Q-RPNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 453 ~~~l~~~l~~------~G~~~~~---~----~-~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
..++.+.+.+ .|+.+.. + + .++++|+|++. ..+++++++++|++++++..
T Consensus 331 ~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~-~~~~~~~~~~~l~~~l~~~~ 394 (397)
T PRK07568 331 AEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL-NEEDLKRAMEILKEALEKYN 394 (397)
T ss_pred HHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHhh
Confidence 7788888765 4665432 1 1 13689999984 45999999999999887654
No 120
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.89 E-value=1.8e-21 Score=203.88 Aligned_cols=298 Identities=14% Similarity=0.093 Sum_probs=205.6
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhh
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY 245 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~ 245 (541)
+.+...+..++++++++++|.+ .. + ++|+| ++++..+++++. ++| ++|+++++.|+++...++.
T Consensus 82 ~~G~~~l~~~l~~~la~~~g~~-~~----i--~~tsG-~~a~~~~~~~l~-----~~g---d~vi~~~~~~~~~~~~~~~ 145 (397)
T PRK06939 82 ICGTQDLHKELEEKLAKFLGTE-DA----I--LYSSC-FDANGGLFETLL-----GKE---DAIISDALNHASIIDGVRL 145 (397)
T ss_pred ccCCcHHHHHHHHHHHHHhCCC-cE----E--EEcCh-HHHHHHHHHHhC-----CCC---CEEEEEhhhhHHHHHHHHh
Confidence 3466677888999999999975 32 4 56665 888888877664 266 9999999999999999999
Q ss_pred cCCeEEEeeCCCCCccCHHHHHHhhcc------CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhh
Q 009181 246 FNIKLWRVPVDKEFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPF 319 (541)
Q Consensus 246 ~G~~v~~v~~~~~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f 319 (541)
.|++++.++. .|++++++++++ ++++|+..+..+++|.+.++++|.++|++||+++++|++|+.+.+.
T Consensus 146 ~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~- 219 (397)
T PRK06939 146 CKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVG- 219 (397)
T ss_pred cCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcC-
Confidence 9999888775 488999888864 6788888888899999999999999999999999999999532221
Q ss_pred hhhcCCC-CCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHH
Q 009181 320 AKKLGYP-IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAW 398 (541)
Q Consensus 320 ~~~~g~~-~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~ 398 (541)
..|.. .+..+. ..++|+++.++||++.++ .+|+++.+ +++..........+. ..++......+++.
T Consensus 220 --~~~~~~~~~~~~-~~~~~i~~~S~sK~~~g~-r~G~v~~~-~~~~~~l~~~~~~~~--------~~~~~~~~~~~a~~ 286 (397)
T PRK06939 220 --ENGRGTVEHFGV-MDRVDIITGTLGKALGGA-SGGYTAGR-KEVIDWLRQRSRPYL--------FSNSLAPAIVAASI 286 (397)
T ss_pred --CCCCCHHHHcCC-CCCCcEEEEECHHHhCcc-CceEEEeC-HHHHHHHHHhCcccc--------ccCCCCHHHHHHHH
Confidence 11100 001111 235789999999996454 56876654 444332211111111 01111122233445
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-CCHHHHHHHHHhCCceeccCC------
Q 009181 399 AALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-VDIFEVNDIMSSKGWHLNPLQ------ 471 (541)
Q Consensus 399 ~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~~~~~l~~~l~~~G~~~~~~~------ 471 (541)
++++.+. ...+..++..++++++.+.|++. ++++.. +...++.+...+ .+..++.+.|.++|+.+....
T Consensus 287 ~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 362 (397)
T PRK06939 287 KVLELLE--ESDELRDRLWENARYFREGMTAA-GFTLGP-GEHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPK 362 (397)
T ss_pred HHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCcCC-CCCCEEEEEECCHHHHHHHHHHHHHCCceEeeeCCCCCCC
Confidence 5555442 23567788889999999999887 666543 445555554433 256789999999997654321
Q ss_pred CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 472 RPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 472 ~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
..+++|++++..++ +++++++++|+++++++
T Consensus 363 ~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 363 GQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred CCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 12579999987554 99999999999988654
No 121
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.2e-20 Score=196.87 Aligned_cols=302 Identities=16% Similarity=0.150 Sum_probs=212.2
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
..|....+...+++.+.+++.+.+|.+ +++ + ++|+|+++++..++.++.. +| ++|+++.+.|+.
T Consensus 60 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~----i--~it~G~~~al~~~~~~~~~-----~g---d~vlv~~p~y~~ 125 (384)
T PRK06348 60 TRYTDSGGDVELIEEIIKYYSKNYDLSFKRNE----I--MATVGACHGMYLALQSILD-----PG---DEVIIHEPYFTP 125 (384)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCChhh----E--EEcCChHHHHHHHHHHhcC-----CC---CEEEEeCCCCcc
Confidence 445555666778888888887776653 443 7 8999999999999998853 66 899999999999
Q ss_pred HHHHHhhcCCeEEEeeCC--CCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcc
Q 009181 239 YDKAAQYFNIKLWRVPVD--KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~--~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~g 313 (541)
+..+++..|.+++.+|.+ +++.+|+++|++++++++++|++++|+||||.+.+ +++|.++|++|++++++|++|+
T Consensus 126 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~ 205 (384)
T PRK06348 126 YKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYD 205 (384)
T ss_pred hHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccc
Confidence 999999999999999874 36779999999999888999999999999999976 7788999999999999999998
Q ss_pred cchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccc--cccCCCccCCCcccCCCC
Q 009181 314 GFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAV--TEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~~gsr~ 390 (541)
.+... ....+...++ ...+-.++..++.|... .+..+|+++.. +++........ ..|. .+
T Consensus 206 ~~~~~---~~~~~~~~~~-~~~~~vi~~~SfSK~~~l~GlRiG~~v~~-~~~~~~~~~~~~~~~~~----------~~-- 268 (384)
T PRK06348 206 GFSFY---EDFVPMATLA-GMPERTITFGSFSKDFAMTGWRIGYVIAP-DYIIETAKIINEGICFS----------AP-- 268 (384)
T ss_pred cceeC---CCccchhhcC-CCcCcEEEEecchhccCCccccceeeecC-HHHHHHHHHHHHhccCC----------CC--
Confidence 77541 1000011121 11233566678899843 56679987764 33332211111 1111 01
Q ss_pred CchHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCee-EEEEecC--CCCHHHHHHHHH-hCC
Q 009181 391 GGLIAGAWAALMSLG--QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMT-IVAFGSD--VVDIFEVNDIMS-SKG 464 (541)
Q Consensus 391 ~~~~a~~~~al~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-~v~f~~~--~~~~~~l~~~l~-~~G 464 (541)
...+.++...+. ....++..+...++++++.+.|++++++++. +|..+ +++++.+ +.+..++.+.+. +.|
T Consensus 269 ---~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~-~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~g 344 (384)
T PRK06348 269 ---TISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLH-PPKGSIYAFINIKKTGLSSVEFCEKLLKEAH 344 (384)
T ss_pred ---HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-cCCeeEEEEEecccCCCCHHHHHHHHHHhCC
Confidence 223444443332 3345566777778888999999988777655 45544 4566665 347788888876 568
Q ss_pred ceecc---CC--CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 009181 465 WHLNP---LQ--RPNSIHICVTLQHVAVVDVFLRDLRES 498 (541)
Q Consensus 465 ~~~~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~~~ 498 (541)
+.+.. ++ .++++|+|++. +.+++++.+++|+++
T Consensus 345 v~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~ 382 (384)
T PRK06348 345 VLVIPGKAFGESGEGYIRLACTV-GIEVLEEAFNRIEKM 382 (384)
T ss_pred EEEcCchhhccCCCCeEEEEecC-CHHHHHHHHHHHHhh
Confidence 76542 22 24799999974 558888888888764
No 122
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.89 E-value=2.6e-21 Score=200.75 Aligned_cols=286 Identities=19% Similarity=0.167 Sum_probs=209.7
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++++|.++++ + ++|+|+++++..++.++.+ +| ++|+++++.|..+...++..|++++.+|
T Consensus 71 ~lr~~ia~~~~~~~~~----i--~~t~G~~~~l~~~~~~l~~-----~g---d~vl~~~p~y~~~~~~~~~~g~~~~~~~ 136 (367)
T PRK02731 71 ELKAALAEKFGVDPER----I--ILGNGSDEILELLARAYLG-----PG---DEVIYSEHGFAVYPIAAQAVGAKPVEVP 136 (367)
T ss_pred HHHHHHHHHhCcCHHH----E--EEcCCHHHHHHHHHHHhcC-----CC---CEEEEecCCHHHHHHHHHHcCCeEEEec
Confidence 4666888888987765 6 8999999999888777642 56 8999999999998888899999999999
Q ss_pred CCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHc--CCEEEEeCCcccchhhhhhhcCCCCCCCCc
Q 009181 255 VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH--GTCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~--~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~ 332 (541)
. +++.+|++++++++++++++|++++|+||||.+.|.+++.++++.+ |+++++|++|..+..- ... .+.++.
T Consensus 137 ~-~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~--~~~---~~~~~~ 210 (367)
T PRK02731 137 A-KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRR--KDY---EDGLEL 210 (367)
T ss_pred c-cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccC--cCc---ccHHHH
Confidence 8 4578999999999998999999999999999999999999999875 8999999999765420 000 001111
Q ss_pred C-CCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhH-HHH
Q 009181 333 S-VQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ-EGY 409 (541)
Q Consensus 333 ~-~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~-~g~ 409 (541)
. ...-.++..+..|.. .++..+|+++.+ +++.+........|. . ...+++++...+.. +.+
T Consensus 211 ~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~-~~~~~~l~~~~~~~~----------~-----~~~~~~~a~~~l~~~~~~ 274 (367)
T PRK02731 211 VAKFPNVVVTRTFSKAYGLAGLRVGYGIAP-PEIIDALNRVRQPFN----------V-----NSLALAAAVAALDDDAFV 274 (367)
T ss_pred HhhcCCEEEEeeehHhhcCcccceeeeeCC-HHHHHHHHHccCCCC----------C-----CHHHHHHHHHHhCCHHHH
Confidence 1 111245556777973 344557986654 443332211111111 0 13366666666643 446
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-CCHHHHHHHHHhCCceeccC---CCCCeEEEEecCCCH
Q 009181 410 LENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-VDIFEVNDIMSSKGWHLNPL---QRPNSIHICVTLQHV 485 (541)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~~~~~l~~~l~~~G~~~~~~---~~~~~iRi~~~~~~~ 485 (541)
++..++..++.+++.+.|++. ++.+. ++..+++++..++ .+..++.+.|.++|+.+... +.++++|++++ +.
T Consensus 275 ~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~ 350 (367)
T PRK02731 275 EKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG--TE 350 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCCCCCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC--CH
Confidence 777888888899999999987 77765 5567888888743 47889999999999876543 33578999987 45
Q ss_pred HHHHHHHHHHHHHHH
Q 009181 486 AVVDVFLRDLRESVE 500 (541)
Q Consensus 486 e~id~~i~~L~~~~~ 500 (541)
++++++++.|+++++
T Consensus 351 ~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 351 EENRRFLAALKEFLA 365 (367)
T ss_pred HHHHHHHHHHHHHHh
Confidence 899999999998864
No 123
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.89 E-value=1.8e-20 Score=200.31 Aligned_cols=311 Identities=15% Similarity=0.185 Sum_probs=214.2
Q ss_pred cccchHHHHHHHHHHHHHHHHhC----CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 163 LDIFQSVARFEAEVIAMTAALLG----NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g----~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
+....|..++.+.+.+++.+.+| +++++ | ++|+|+++++.+++.++.+ +| +.|+++.+.|+.
T Consensus 90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~----I--vit~Ga~~al~~l~~~l~~-----pG---D~Vlv~~P~Y~~ 155 (496)
T PLN02376 90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDPER----V--VMSGGATGANETIMFCLAD-----PG---DVFLIPSPYYAA 155 (496)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCcCChhh----E--EEccchHHHHHHHHHHhCC-----CC---CEEEECCCCccc
Confidence 44456778888888888888877 55655 7 8999999999999999865 77 999999999999
Q ss_pred HHHHHh-hcCCeEEEeeCC--CCCccCHHHHHHhhc------cCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEE
Q 009181 239 YDKAAQ-YFNIKLWRVPVD--KEFRADVKAIKKYIN------RNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCL 306 (541)
Q Consensus 239 ~~ka~~-~~G~~v~~v~~~--~~~~~d~~~Le~~i~------~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~l 306 (541)
+...+. ..|++++.||++ +++.+|++++++++. .++++|++++|+||||.+.+ +++|.++|++|++++
T Consensus 156 ~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~l 235 (496)
T PLN02376 156 FDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHL 235 (496)
T ss_pred hHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 999887 589999999996 367899999987642 36888999999999999987 667888999999999
Q ss_pred EEeCCcccchhh---hhhhcCCCCCCCCcC--CCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCcc
Q 009181 307 HVDLCLGGFVLP---FAKKLGYPIPPFDFS--VQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLY 380 (541)
Q Consensus 307 hvD~a~gg~~~~---f~~~~g~~~p~~~~~--~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~ 380 (541)
++|++|+.+.+. |..-... .+..+.. ....-.+..+++|.+ ..+..+|+++..++.+..........+
T Consensus 236 I~DEiY~~~~f~~~~~~si~~l-~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~~----- 309 (496)
T PLN02376 236 VVDEIYAATVFAGGDFVSVAEV-VNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSFG----- 309 (496)
T ss_pred EEEcCccccccCCCCcccHHHh-hccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhcC-----
Confidence 999999876531 1000000 0001110 012234467899984 466779987776555443211111000
Q ss_pred CCCcccCCCCCchHHHHHHHHHHHhHHHH-----HHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC----
Q 009181 381 VSPTVAGSRPGGLIAGAWAALMSLGQEGY-----LENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV---- 451 (541)
Q Consensus 381 ~~~~~~gsr~~~~~a~~~~al~~lg~~g~-----~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~---- 451 (541)
. .....++++...+....+ .+..++..+..+.+.+.|++. +++++.+..+.+++++++..
T Consensus 310 -------~---vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~aG~flwi~l~~~~~~~ 378 (496)
T PLN02376 310 -------L---VSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTSNAGLFAWMDLRHLLRDR 378 (496)
T ss_pred -------C---CCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCceEEEEEEchhhhccC
Confidence 0 012255555555543222 334566677778888888876 77766554556777776431
Q ss_pred ----CHHHHHHHHHh-CCceecc---C--CCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHc
Q 009181 452 ----DIFEVNDIMSS-KGWHLNP---L--QRPNSIHICVTLQHVAVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 452 ----~~~~l~~~l~~-~G~~~~~---~--~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~~ 504 (541)
+..++.+.+.+ .|+.+.. + ..++++|+|++....+++++.+++|++++.+.++
T Consensus 379 ~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~~ 441 (496)
T PLN02376 379 NSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVSKNKN 441 (496)
T ss_pred CchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhhh
Confidence 12466777765 4876543 2 2358999999976678999999999999865443
No 124
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.89 E-value=3.6e-21 Score=200.95 Aligned_cols=300 Identities=15% Similarity=0.117 Sum_probs=204.9
Q ss_pred cccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH
Q 009181 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka 242 (541)
+....+...+..++.+++++++|.+. . + ++|+| ++++..++.++.+ +| ++|+++.+.|+++..+
T Consensus 70 ~~~~~g~~~l~~~l~~~l~~~~g~~~-~----i--~~~sG-~~a~~~a~~~~~~-----~g---d~vi~~~~~~~~~~~~ 133 (385)
T TIGR01825 70 VRTIAGTLRLHEELEEKLAKFKKTEA-A----L--VFQSG-FNTNQGVLSALLR-----KG---DIVLSDELNHASIIDG 133 (385)
T ss_pred cCcccCCcHHHHHHHHHHHHHhCCCc-E----E--EECcH-HHHHHHHHHHhCC-----CC---CEEEEEccccHHHHHH
Confidence 44455667788889999999999653 2 3 55555 7888888877643 66 8999999999999988
Q ss_pred HhhcCCeEEEeeCCCCCccCHHHHHHhhcc----CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhh
Q 009181 243 AQYFNIKLWRVPVDKEFRADVKAIKKYINR----NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLP 318 (541)
Q Consensus 243 ~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~----~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~ 318 (541)
+...|+++..++ .+|++++++.+.+ ++++|+.+++++++|.+.|+++|.++|++||+++++|++|+.+.++
T Consensus 134 ~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~ 208 (385)
T TIGR01825 134 LRLTKATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMG 208 (385)
T ss_pred HHhcCCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcC
Confidence 888888887664 3688888887764 6889999999999999999999999999999999999999765442
Q ss_pred hhhhcCCC-CCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHH
Q 009181 319 FAKKLGYP-IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGA 397 (541)
Q Consensus 319 f~~~~g~~-~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~ 397 (541)
..|.. .+.++.. .+++++..+++|++ ++.| |+++ .+++...........|..+ +.......+++
T Consensus 209 ---~~~~~~~~~~~~~-~~~~i~~~s~sK~~-~~~g-G~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~a~ 273 (385)
T TIGR01825 209 ---EAGRGTVHHFGLE-DKVDIQVGTLSKAI-GVVG-GYAA-GHKELIEYLKNRARPFLFS--------TAQPPAVVAAL 273 (385)
T ss_pred ---CCCCccHhhcCCC-cCCcEEEEeccHHh-hcCC-CEEe-cCHHHHHHHHHhCcccccc--------CCCCHHHHHHH
Confidence 11100 1112322 56788889999994 5554 6544 4444333221111111100 01111123344
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-CHHHHHHHHHhCCceeccCCC----
Q 009181 398 WAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV-DIFEVNDIMSSKGWHLNPLQR---- 472 (541)
Q Consensus 398 ~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~-~~~~l~~~l~~~G~~~~~~~~---- 472 (541)
.++++.+.. ..+..++..++++++.+.|+++ ++++.. +..+++.+..... +..++.+.|.++|+.+.....
T Consensus 274 ~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~ 349 (385)
T TIGR01825 274 AAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYDTGG-SETPITPVVIGDEKAAQEFSRRLFDEGIFAQSIVFPTVP 349 (385)
T ss_pred HHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCCC-CCCCEEEEEECCHHHHHHHHHHHHHCCcEEcccCCCCCC
Confidence 555543322 2356777788899999999886 777664 3445666554332 456888999999987643222
Q ss_pred --CCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 473 --PNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 473 --~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
.+.+|++++..++ +++++++++|+++++++
T Consensus 350 ~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 350 RGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 2579999876665 99999999999988653
No 125
>PRK09105 putative aminotransferase; Provisional
Probab=99.89 E-value=3.5e-21 Score=199.54 Aligned_cols=281 Identities=18% Similarity=0.129 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEE
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~ 252 (541)
..++++.+++.+|.++++ | ++|+|+++++.+++.++.+ +| ++|+++++.|+.+...++.+|++++.
T Consensus 80 ~~~Lr~aia~~~~v~~e~----I--~it~Gs~~ai~~~~~~l~~-----~g---d~Vli~~P~y~~~~~~~~~~g~~~~~ 145 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADH----V--MAYAGSSEPLNYAVLAFTS-----PT---AGLVTADPTYEAGWRAADAQGAPVAK 145 (370)
T ss_pred HHHHHHHHHHHhCcChhh----E--EEcCChHHHHHHHHHHHcC-----CC---CEEEEeCCChHHHHHHHHHcCCeEEE
Confidence 334666788899998776 7 8999999999999988753 56 89999999999999999999999999
Q ss_pred eeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHH--cCCEEEEeCCcccchhhhhhhcCCCCCCC
Q 009181 253 VPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALS--HGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (541)
Q Consensus 253 v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~--~~i~lhvD~a~gg~~~~f~~~~g~~~p~~ 330 (541)
+|.++++.+|+++++++ .++++++++++|+||||.+.+.+++.++++. +++++++|++|..|.. + .+..
T Consensus 146 v~~~~~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~------~--~s~~ 216 (370)
T PRK09105 146 VPLRADGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSD------A--PSVV 216 (370)
T ss_pred ecCCCCCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhcc------C--cchH
Confidence 99988889999999887 5678999999999999999998888888764 4899999999964421 0 0011
Q ss_pred CcCCCCce-EEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh-H
Q 009181 331 DFSVQGVT-SISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG-Q 406 (541)
Q Consensus 331 ~~~~~gvd-sis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg-~ 406 (541)
+....+-+ .+..++.|. ++..| +|+++. ++++....... ..| . ....++.++...+. .
T Consensus 217 ~~~~~~~~vi~~~SfSK~-~g~~GlRiG~~v~-~~~~i~~l~~~-~~~-------------~--~~~~~~~aa~~~L~~~ 278 (370)
T PRK09105 217 DLVAQRKDLIVLRTFSKL-YGMAGMRLGLAAA-RPDLLAKLARF-GHN-------------P--LPVPAAAAGLASLRDP 278 (370)
T ss_pred HHHhhCCCEEEEecccHh-hcCCccceeeeec-CHHHHHHHHhc-CCC-------------C--cCHHHHHHHHHHHhCH
Confidence 11112223 444577788 66555 898665 34443322111 000 0 11224555555553 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceec-cC-CCCCeEEEEecCCC
Q 009181 407 EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLN-PL-QRPNSIHICVTLQH 484 (541)
Q Consensus 407 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~-~~-~~~~~iRi~~~~~~ 484 (541)
+.+++..+++.++++++.+.|++. ++++. ++..+++.+... .+..++.+.|.++|+.+. .+ +.++++|++++ +
T Consensus 279 ~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~~f~~~~~~-~~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~--~ 353 (370)
T PRK09105 279 KLVPQRRAENAAVREDTIAWLKKK-GYKCT-PSQANCFMVDVK-RPAKAVADAMAKQGVFIGRSWPIWPNWVRVTVG--S 353 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCCcC-CCCCcEEEEeCC-CCHHHHHHHHHHCCcEEecCCCCCCCeEEEEcC--C
Confidence 456677788888999999999986 77765 456666666654 467889999999998773 22 23589999988 3
Q ss_pred HHHHHHHHHHHHHHH
Q 009181 485 VAVVDVFLRDLRESV 499 (541)
Q Consensus 485 ~e~id~~i~~L~~~~ 499 (541)
.+++++++++|++++
T Consensus 354 ~~~~~~l~~al~~~~ 368 (370)
T PRK09105 354 EEEMAAFRSAFAKVM 368 (370)
T ss_pred HHHHHHHHHHHHHHh
Confidence 578999999998765
No 126
>PRK07683 aminotransferase A; Validated
Probab=99.89 E-value=1.6e-20 Score=196.09 Aligned_cols=318 Identities=14% Similarity=0.180 Sum_probs=217.6
Q ss_pred HHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCC
Q 009181 148 INEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGIT 225 (541)
Q Consensus 148 ~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~ 225 (541)
+.+++......+...|...++..++++++.+++.+.+|. +++. ++ ++|+|+++|+.+++.++.. +|
T Consensus 46 ~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~---~I--~~t~G~~~al~~~~~~l~~-----~g-- 113 (387)
T PRK07683 46 VKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPES---EI--IVTIGASEAIDIAFRTILE-----PG-- 113 (387)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---cE--EEeCChHHHHHHHHHHhCC-----CC--
Confidence 334444333334445544567788888888888777675 3441 26 8999999999999888643 56
Q ss_pred CCeEEecCCccchHHHHHhhcCCeEEEeeCCC-CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHH
Q 009181 226 RPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALS 301 (541)
Q Consensus 226 ~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~ 301 (541)
++|+++.+.++.+..+++..|++++.++.++ ++.+|.+++++.++++++++++++|+||||.+.+ +++|+++|++
T Consensus 114 -d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~ 192 (387)
T PRK07683 114 -TEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKD 192 (387)
T ss_pred -CEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 8999999999999999999999999999875 6778999999999989999999999999999865 7899999999
Q ss_pred cCCEEEEeCCcccchhhhhhhcCCCCCCCCc-CCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCc
Q 009181 302 HGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF-SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGL 379 (541)
Q Consensus 302 ~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~-~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~ 379 (541)
+|+++++|++|+.+... .. . .+-..+ ...+-.++..++.|... .+..+|+++.. +++....... ..|...
T Consensus 193 ~~~~ii~De~y~~~~~~--~~-~--~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~-~~l~~~~~~~-~~~~~~- 264 (387)
T PRK07683 193 KNIFVLSDEIYSELVYE--QP-H--TSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAP-SYLAKHILKV-HQYNVT- 264 (387)
T ss_pred cCeEEEEecccccceeC--CC-c--CChhhccCCcCCeEEEeeccccccCccceeEEEEcC-HHHHHHHHHH-HHhccC-
Confidence 99999999999876431 10 0 111111 12233566778899954 45558986654 3333322111 112110
Q ss_pred cCCCcccCCCCCchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEE-ecCC--CCHH
Q 009181 380 YVSPTVAGSRPGGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAF-GSDV--VDIF 454 (541)
Q Consensus 380 ~~~~~~~gsr~~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f-~~~~--~~~~ 454 (541)
... ..++.++...+ +...+++..++..++++++.+.|++. ++.+. ++..+++.| ...+ .+..
T Consensus 265 ---------~~~--~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 331 (387)
T PRK07683 265 ---------CAS--SISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVE-KPTGAFYLFPSIGHFTMSSF 331 (387)
T ss_pred ---------CCC--hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCeeEEEEEecccCCCCHH
Confidence 001 11333333333 44556677778888899999999886 66655 445454444 3432 3566
Q ss_pred HHHHH-HHhCCceecc---CC--CCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 455 EVNDI-MSSKGWHLNP---LQ--RPNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 455 ~l~~~-l~~~G~~~~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
++... +.++|+.+.. ++ .++++||+++. +.+++++.+++|.++++
T Consensus 332 ~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 332 DFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLDRLEAFLQ 382 (387)
T ss_pred HHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 77755 5677876543 11 24799999986 56888988988888775
No 127
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=6.4e-21 Score=197.15 Aligned_cols=282 Identities=18% Similarity=0.176 Sum_probs=205.4
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.++++++.++++ + ++|+|+++++..++.++.+ +| ++|+++++.|+.+...+...|++++.+|
T Consensus 68 ~lr~~ia~~~~~~~~~----i--~~t~G~~~~l~~~~~~~~~-----~g---d~v~~~~p~y~~~~~~~~~~g~~~~~~~ 133 (359)
T PRK03158 68 ELRTKVAKHLGVDEEQ----L--LFGAGLDEVIQMISRALLN-----PG---TNTVMAEPTFSQYRHNAIIEGAEVREVP 133 (359)
T ss_pred HHHHHHHHHhCCCHHH----E--EECCCHHHHHHHHHHHHhC-----CC---CEEEEcCCCHHHHHHHHHHcCCeEEEEe
Confidence 3556778888887665 6 8999999999988887743 56 8999999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHH--cCCEEEEeCCcccchhhhhhhcCCCCCCCCc
Q 009181 255 VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALS--HGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~--~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~ 332 (541)
++ ++.+|+++++++++++++++++++|+||||.+.+.++|.++++. +|+++++|++|+.+... . .. .+.+..
T Consensus 134 ~~-~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~--~--~~-~~~~~~ 207 (359)
T PRK03158 134 LK-DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTA--E--DY-PDTLPL 207 (359)
T ss_pred cC-CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCC--c--cc-ccHHHH
Confidence 97 67899999999999899999999999999999999999999887 59999999999866431 0 00 000010
Q ss_pred -CCCCceEEEeCCCCCCCCC--CCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhH-HH
Q 009181 333 -SVQGVTSISVDVHKYGLAP--KGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ-EG 408 (541)
Q Consensus 333 -~~~gvdsis~~~hK~~~~p--~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~-~g 408 (541)
...+-.++..++.|. ++. ..+|+++. ++++..........|. ....++.++...+.. +.
T Consensus 208 ~~~~~~vi~~~S~SK~-~g~~GlRiG~~v~-~~~~~~~~~~~~~~~~---------------~~~~~q~~~~~~l~~~~~ 270 (359)
T PRK03158 208 LEKYENLIVLRTFSKA-YGLAALRVGYGIA-SEELIEKLNIARPPFN---------------TTRIAQYAAIAALEDQAF 270 (359)
T ss_pred HHhcCCEEEEEechHh-hcCcchhhehhcC-CHHHHHHHHHhcCCCC---------------CCHHHHHHHHHHhcCHHH
Confidence 112235666788898 554 44798665 4444332211111111 113356666555543 34
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceecc---CCCCCeEEEEecCCCH
Q 009181 409 YLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP---LQRPNSIHICVTLQHV 485 (541)
Q Consensus 409 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~---~~~~~~iRi~~~~~~~ 485 (541)
.++..+...+.++++.+.|++. ++.+. ++...++++... .+..++.+.|.++|+.+.. ++.++++|++++ +.
T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~g~~i~~~~~-~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~~ 345 (359)
T PRK03158 271 LKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQTNFIFVDTG-RDANELFEALLKKGYIVRSGAALGFPTGVRITIG--LK 345 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCcCcEEEEECC-CCHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC--CH
Confidence 5566667777888888889887 77765 455667777663 4678899999999976654 345689999988 46
Q ss_pred HHHHHHHHHHHHH
Q 009181 486 AVVDVFLRDLRES 498 (541)
Q Consensus 486 e~id~~i~~L~~~ 498 (541)
+++++++++|+++
T Consensus 346 ~~~~~l~~al~~~ 358 (359)
T PRK03158 346 EQNDKIIELLKEL 358 (359)
T ss_pred HHHHHHHHHHHHh
Confidence 8999999999875
No 128
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.89 E-value=3.5e-21 Score=198.81 Aligned_cols=284 Identities=14% Similarity=0.148 Sum_probs=202.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEe
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v 253 (541)
.++++.+++.++.++++ + ++|+|+++++..++.++. +| + +++..+.++.+...++..|++++.+
T Consensus 58 ~~lr~~ia~~~~~~~~~----i--~it~Ga~~~l~~~~~~l~------~g---~-viv~~P~y~~~~~~~~~~g~~~~~v 121 (356)
T PRK08056 58 RHLHQALARHHQVPASW----I--LAGNGETESIFAVVSGLK------PR---R-AMIVTPGFAEYRRALQQVGCEIRRY 121 (356)
T ss_pred HHHHHHHHHHhCcChhh----E--EECCCHHHHHHHHHHHhC------CC---C-EEEeCCCcHHHHHHHHHcCCeEEEE
Confidence 45777888899998776 6 899999999998887651 34 3 6777788999999999999999999
Q ss_pred eCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCC
Q 009181 254 PVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIP 328 (541)
Q Consensus 254 ~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p 328 (541)
|.++ ++.+| +++++++.+++++|++++|+||||.+.+ +++|+++|+++++++++|++|..+.. +.... .+
T Consensus 122 ~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~---~~~~~-~~ 196 (356)
T PRK08056 122 SLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIP---DETGF-IP 196 (356)
T ss_pred ecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCC---cchHH-HH
Confidence 9864 45666 4566677788999999999999999988 78899999999999999999987643 11000 11
Q ss_pred CCCcCCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHH-hH
Q 009181 329 PFDFSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL-GQ 406 (541)
Q Consensus 329 ~~~~~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l-g~ 406 (541)
.+. ....+++..+++|+.. .+..+|+++..+++...........|.. ...++.++...+ +.
T Consensus 197 ~~~--~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~~~~---------------~~~~~~~a~~~l~~~ 259 (356)
T PRK08056 197 QLA--DNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMPWSI---------------NAFAALAGEVILQDR 259 (356)
T ss_pred Hhc--cCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCCch---------------hHHHHHHHHHHhCCH
Confidence 111 1234677889999943 4455898776554443322111111110 122445444444 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceecc---C-C-CCCeEEEEec
Q 009181 407 EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP---L-Q-RPNSIHICVT 481 (541)
Q Consensus 407 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~---~-~-~~~~iRi~~~ 481 (541)
...++..+...+.++++.+.|++++++.+. ++..++++++... +..++.+.|.++|+.+.. + + .++++||+++
T Consensus 260 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~ 337 (356)
T PRK08056 260 AYQQATWQWLAEEGARFYQALCALPLLTVW-PGRANYLFLRCER-PDIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR 337 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCCCcEEEEEcCC-ChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc
Confidence 445666778888999999999988888765 5567777777653 456889999999976543 2 1 1368999987
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 009181 482 LQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 482 ~~~~e~id~~i~~L~~~~ 499 (541)
+.++.+++++.|++++
T Consensus 338 --~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 338 --SAAENERLLAALRNVL 353 (356)
T ss_pred --CHHHHHHHHHHHHHHH
Confidence 3588899999998764
No 129
>PRK08068 transaminase; Reviewed
Probab=99.89 E-value=2e-20 Score=195.56 Aligned_cols=302 Identities=12% Similarity=0.098 Sum_probs=208.9
Q ss_pred CcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH
Q 009181 162 HLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (541)
Q Consensus 162 ~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~ 239 (541)
+|...++..++.+.+.+++.+.+|. ++++ ++ ++|+|+++++..++.++.+ +| ++|+++.++|+.+
T Consensus 65 ~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~---~i--~it~G~~~~l~~~~~~~~~-----~g---d~vlv~~P~y~~~ 131 (389)
T PRK08068 65 KYSPFRGYPFLKEAAADFYKREYGVTLDPET---EV--AILFGGKAGLVELPQCLMN-----PG---DTILVPDPGYPDY 131 (389)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---cE--EEcCCcHHHHHHHHHHhCC-----CC---CEEEEcCCCCcch
Confidence 4444566778888888888777775 3441 26 8999999999998887653 66 8999999999999
Q ss_pred HHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccCH---HHHHHHHHHcCCEEEEeCCccc
Q 009181 240 DKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPI---QELGELALSHGTCLHVDLCLGG 314 (541)
Q Consensus 240 ~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i---~~I~~la~~~~i~lhvD~a~gg 314 (541)
..+++..|++++.+|+++ ++.+|++++++++.+++++|++++|+||||.+.+. ++|.++|++|++++++|++|+.
T Consensus 132 ~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~ 211 (389)
T PRK08068 132 LSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGA 211 (389)
T ss_pred HHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhh
Confidence 999999999999999974 56899999999998889999999999999999885 6888899999999999999976
Q ss_pred chhhhhhhcCCCCCCCCc-CCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCc
Q 009181 315 FVLPFAKKLGYPIPPFDF-SVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG 392 (541)
Q Consensus 315 ~~~~f~~~~g~~~p~~~~-~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~ 392 (541)
+.. ... ...+-... ......++..++.|.+ .++..+|+++. ++++..........|..+ -+
T Consensus 212 ~~~---~~~-~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~~~l~~~~~~~~~~----------~~-- 274 (389)
T PRK08068 212 IGF---DGQ-KPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-NESVIEAINLLQDHLFVS----------LF-- 274 (389)
T ss_pred hcc---CCC-CCcChhhCCCccCCEEEEecchhccCCccceeEeEec-CHHHHHHHHHHHhhccCC----------CC--
Confidence 532 110 00110111 1122346667888994 34455898664 454443322111112111 01
Q ss_pred hHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCee-EEEEecCC-CCHHHHHHHHHh-CCcee
Q 009181 393 LIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMT-IVAFGSDV-VDIFEVNDIMSS-KGWHL 467 (541)
Q Consensus 393 ~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-~v~f~~~~-~~~~~l~~~l~~-~G~~~ 467 (541)
...+.++...+ +...+++..++..+.++++.+.|++. ++.+. +|..+ ++++..++ .+..++.+.|.+ .|+.+
T Consensus 275 -~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-~~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v 351 (389)
T PRK08068 275 -GAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWEVD-APKGSFFAWMPVPKGYTSEQFADLLLEKAHVAV 351 (389)
T ss_pred -hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCeeEEEEEECCCCCCHHHHHHHHHHhCCEEE
Confidence 11233333333 34667788888899999999999887 77655 45554 46777754 477899999886 58766
Q ss_pred cc---CC--CCCeEEEEecCCCHHHHHHHHHHHHH
Q 009181 468 NP---LQ--RPNSIHICVTLQHVAVVDVFLRDLRE 497 (541)
Q Consensus 468 ~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~~ 497 (541)
.. ++ .++++|++++. ..+.+.+.+++|++
T Consensus 352 ~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~ 385 (389)
T PRK08068 352 APGNGFGEHGEGYVRVGLLT-DEERLREAVERIGK 385 (389)
T ss_pred ecchHhCccCCCeEEEEEcC-CHHHHHHHHHHHHH
Confidence 43 22 24699999974 44666666666554
No 130
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=7.6e-21 Score=197.82 Aligned_cols=283 Identities=17% Similarity=0.139 Sum_probs=208.8
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++++|+++++ | ++|+|+++++.+++.++.+ +| ++|+++.+.|+.+...++..|++++.+|
T Consensus 90 ~lr~~ia~~~~~~~~~----I--~~t~Ga~~~i~~~~~~~~~-----~g---d~Vlv~~P~y~~y~~~~~~~g~~~~~v~ 155 (380)
T PLN03026 90 RLRAALAEDSGLESEN----I--LVGCGADELIDLLMRCVLD-----PG---DKIIDCPPTFGMYVFDAAVNGAEVIKVP 155 (380)
T ss_pred HHHHHHHHHhCcChhh----E--EEcCCHHHHHHHHHHHhcC-----CC---CEEEEcCCChHHHHHHHHHcCCEEEEee
Confidence 4777889999988775 6 8999999999999887643 66 8999999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhh-ccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcC
Q 009181 255 VDKEFRADVKAIKKYI-NRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS 333 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i-~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~ 333 (541)
.++++.+|+++|++++ ++++++|++++|+||||.+.|.+++.++++.. +++++|++|..|... +...+.. .
T Consensus 156 ~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~-----~~~~~~~--~ 227 (380)
T PLN03026 156 RTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQ-----ESRMKWV--K 227 (380)
T ss_pred cCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCC-----cchHHHH--H
Confidence 9878899999999999 78899999999999999999999999999865 999999999765320 0000001 1
Q ss_pred CCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh-HHHHHH
Q 009181 334 VQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG-QEGYLE 411 (541)
Q Consensus 334 ~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg-~~g~~~ 411 (541)
...-.++..++.|.. .++..+|+++. ++++..........|.. ...++.++...+. .+.+++
T Consensus 228 ~~~~viv~~SfSK~~glaGlRiGy~~~-~~~~i~~l~~~~~~~~~---------------~~~~q~aa~~aL~~~~~~~~ 291 (380)
T PLN03026 228 KYDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNV---------------SVAAEVAACAALSNPKYLED 291 (380)
T ss_pred hCCCEEEEecchHhhcCccccceeeec-CHHHHHHHHHhcCCCCC---------------CHHHHHHHHHHhhCHHHHHH
Confidence 112356677888983 24445897665 44443322111111211 1234555555453 244677
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-CCHHHHHHHHHhCCceeccC---CCCCeEEEEecCCCHHH
Q 009181 412 NTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-VDIFEVNDIMSSKGWHLNPL---QRPNSIHICVTLQHVAV 487 (541)
Q Consensus 412 ~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~~~~~l~~~l~~~G~~~~~~---~~~~~iRi~~~~~~~e~ 487 (541)
..+.+.+.++++.+.|++++++++ .++..+++++..++ .+..++.+.|.++|+.+... +.++++|||++ +.++
T Consensus 292 ~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~--~~~~ 368 (380)
T PLN03026 292 VKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSGRDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG--KPEH 368 (380)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCCCCHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC--CHHH
Confidence 788888889999999998865654 45667888888763 46788999999999866433 23478999998 4578
Q ss_pred HHHHHHHHHHH
Q 009181 488 VDVFLRDLRES 498 (541)
Q Consensus 488 id~~i~~L~~~ 498 (541)
++++++.|+++
T Consensus 369 ~~~l~~al~~~ 379 (380)
T PLN03026 369 TDALMEALKQL 379 (380)
T ss_pred HHHHHHHHHHh
Confidence 89999988753
No 131
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.89 E-value=1.8e-20 Score=206.23 Aligned_cols=355 Identities=13% Similarity=0.105 Sum_probs=246.9
Q ss_pred CCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCceeeeecCCCCcccHHHHHH--HHHHhhcccCCCCcccchHHHHHHHH
Q 009181 99 WWTELPRAGLG-VGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLIN--EACSMFAHTNPLHLDIFQSVARFEAE 175 (541)
Q Consensus 99 ~~~~lP~~g~~-~~i~~~l~~~~~~~~~~~~~~~g~~y~~~~~~~~~~~~~~--~~~~~~~~~n~~~~~~~~~~~~~e~e 175 (541)
..+.||+ +.+ .|++++++++..++..+..+..++.|....++.....++. ++++.| +|++++.++|..+...+
T Consensus 53 ~~l~lp~-~~sE~e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaY---TPYQpEisQG~Lqal~e 128 (954)
T PRK12566 53 RPLDLPA-ALDEQAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAY---TPYQPEIAQGRLEALLN 128 (954)
T ss_pred CCCCCCC-CCCHHHHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCchhhhcC---CCCCchhhhHHHHHHHH
Confidence 3567776 578 9999999999666665656666666666555211122222 445444 89999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHH----hhcCCeEE
Q 009181 176 VIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA----QYFNIKLW 251 (541)
Q Consensus 176 v~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~----~~~G~~v~ 251 (541)
.+.|+++++|++..+ . .+..++|.+-..++++.|. .+. + +.++++++..||.+.... +.+|++++
T Consensus 129 ~Qtmi~~LtGm~vaN----A--Sl~D~atA~aEA~~ma~~~-~~~-k---~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~ 197 (954)
T PRK12566 129 FQQMTIDLTGLDLAN----A--SLLDEATAAAEAMALAKRV-AKS-K---SNRFFVDEHCHPQTLSVLRTRAEGFGFELV 197 (954)
T ss_pred HHHHHHHHhCchhhh----h--hhccchhHHHHHHHHHHHH-hhc-C---CCEEEECCCCCHHHHHHHHHhhhcCCcEEE
Confidence 999999999999776 3 6778888766644444432 111 1 267999999999976654 45577776
Q ss_pred EeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 252 RVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
. +++++.++++++.|++++|++ .|.+.|+++|++++|+.|..+++-+-. -.++.-.|
T Consensus 198 ~-----------~~~~~~~~~~~~~v~vq~P~~-~G~i~d~~~i~~~~h~~gal~~~~~d~--------laL~ll~~--- 254 (954)
T PRK12566 198 V-----------DAVDNLAAHAVFGALLQYPDT-HGEIRDLRPLIDQLHGQQALACVAADL--------LSLLVLTP--- 254 (954)
T ss_pred E-----------cchhhcCCCCEEEEEEECCCC-ceEEccHHHHHHHHHHcCCEEEEEeCH--------HHHhCCCC---
Confidence 4 445556777899999999987 899999999999999999986643331 11221112
Q ss_pred cCCCCceEEEeCCCCCC----CCCCCceEEEEecccccccccc---cccccCCCc-c----CCCcccCCCCC--------
Q 009181 332 FSVQGVTSISVDVHKYG----LAPKGTSVVLYRNREIRKHQFV---AVTEWSGGL-Y----VSPTVAGSRPG-------- 391 (541)
Q Consensus 332 ~~~~gvdsis~~~hK~~----~~p~g~g~ll~~~~~~~~~~~~---~~~~~~~~~-~----~~~~~~gsr~~-------- 391 (541)
....|+|++..+.+.+| ||++..|++.++++-.++..-+ ...+-.|.. + -+..++=+|-.
T Consensus 255 Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~ 334 (954)
T PRK12566 255 PGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTA 334 (954)
T ss_pred hhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHH
Confidence 25678999988887654 7777789888887644332100 001101100 0 00011111211
Q ss_pred ----chHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCcee
Q 009181 392 ----GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHL 467 (541)
Q Consensus 392 ----~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~ 467 (541)
+++++.|+++ +|.+|++++.+++..++.+|++.|++ +|+++..++.+..+.+... .+..++.++..++|+.+
T Consensus 335 qaL~A~~a~~Y~~~--~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~fF~~~~v~~~-~~~~~~~~~a~~~~~n~ 410 (954)
T PRK12566 335 QVLLANIAGFYAVY--HGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNRHFFDTLTLEVG-GAQAAIIESAEAARINL 410 (954)
T ss_pred HHHHHHHHHHHHHH--hChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccCCccceEEEEcc-CCHHHHHHHHHHCCCee
Confidence 2344555554 79999999999999999999999999 6999988877888888773 25778888889999888
Q ss_pred ccCCCCCeEEEEecCCCH-HHHHHHHHHHH
Q 009181 468 NPLQRPNSIHICVTLQHV-AVVDVFLRDLR 496 (541)
Q Consensus 468 ~~~~~~~~iRi~~~~~~~-e~id~~i~~L~ 496 (541)
...+ .+.+.+|+...++ +|++.++..+.
T Consensus 411 r~~~-~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 411 RILG-RGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred EEeC-CCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 7664 3578899988776 89998888874
No 132
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.89 E-value=1.7e-20 Score=195.95 Aligned_cols=305 Identities=12% Similarity=0.077 Sum_probs=214.0
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
.+|...++..++.+.+.+++.+..|. ++++ +| ++|+|+++++.+++.++.+ +| ++|+++.++|+.
T Consensus 62 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---~I--~it~Gs~~al~~~~~~l~~-----~g---d~Vlv~~P~y~~ 128 (388)
T PRK07366 62 HGYLLFHGTLDFREAAAQWYEQRFGLAVDPET---EV--LPLIGSQEGTAHLPLAVLN-----PG---DFALLLDPGYPS 128 (388)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcC---eE--EECCCcHHHHHHHHHHhCC-----CC---CEEEEcCCCCcc
Confidence 44555567777888888888877775 3441 26 8899999999999988764 67 899999999999
Q ss_pred HHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcc
Q 009181 239 YDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~g 313 (541)
+...++..|++++.+|+++ .+.+|++++++++.++++++++++|+||||.+.+ +++|.++|++||+++++|++|+
T Consensus 129 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~ 208 (388)
T PRK07366 129 HAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYV 208 (388)
T ss_pred hHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchh
Confidence 9999999999999999974 4678999999888888999999999999999977 5678889999999999999998
Q ss_pred cchhhhhhhcCCCCCCC-CcCCC-CceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCC
Q 009181 314 GFVLPFAKKLGYPIPPF-DFSVQ-GVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~-~~~~~-gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~ 390 (541)
.+... ... ..+.+ ..... ...++..++.|.. ..+..+|+++. ++++..........+..+ ..
T Consensus 209 ~~~~~--~~~--~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~li~~l~~~~~~~~~~----------~~ 273 (388)
T PRK07366 209 DLVFD--GEV--EPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG-NAQLIQALRQVKAVVDFN----------QY 273 (388)
T ss_pred hcccC--CCC--CCCChhhCCCCcccEEEEeecccccCCcchhheehcC-CHHHHHHHHHHHhhcccC----------CC
Confidence 76531 100 01111 11111 1245667889994 45667998664 554443322111111111 00
Q ss_pred CchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC---CHHHHHHHH-HhCC
Q 009181 391 GGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV---DIFEVNDIM-SSKG 464 (541)
Q Consensus 391 ~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~---~~~~l~~~l-~~~G 464 (541)
.. .+.+++..+ ..+.+++..+...+.++++.+.|++. ++....+..+.++++..++. +..++.+.+ .++|
T Consensus 274 ~~---~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~g 349 (388)
T PRK07366 274 RG---ILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GWPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTG 349 (388)
T ss_pred HH---HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCC
Confidence 00 122222223 24567788888889999999999987 77655555677778877642 467787776 5678
Q ss_pred ceecc---CC--CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 009181 465 WHLNP---LQ--RPNSIHICVTLQHVAVVDVFLRDLRES 498 (541)
Q Consensus 465 ~~~~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~~~ 498 (541)
+.+.. ++ .++++|+|++. +.+++++.+++|++.
T Consensus 350 v~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 350 VAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAF 387 (388)
T ss_pred EEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 76543 22 24789999984 468899988888764
No 133
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.89 E-value=7.3e-21 Score=197.38 Aligned_cols=325 Identities=12% Similarity=0.107 Sum_probs=206.8
Q ss_pred ecCCCCcccHHHHHHHHHHhhcccC------CCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHH
Q 009181 135 YIGGSEAEGHFSLINEACSMFAHTN------PLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESIL 208 (541)
Q Consensus 135 y~~~~~~~~~~~~~~~~~~~~~~~n------~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~ 208 (541)
|.+......+.+.+.+++..+..+. ........+..+...++++.+++++|.+.. + ++++ |+.++.
T Consensus 14 YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~-----l--~~~s-G~~a~~ 85 (370)
T PRK05937 14 FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEA-----F--IVPS-GYMANL 85 (370)
T ss_pred ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeE-----E--EECC-hHHHHH
Confidence 3333333335566667776664222 223333344567777789999999999642 2 4555 456665
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhc------cCceEEEeecC
Q 009181 209 LAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYIN------RNTVLIVGSAP 282 (541)
Q Consensus 209 ~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~------~~t~~vv~~~~ 282 (541)
..+..+. ++| +.|+++...|.++..+++........++ ..|+++|+++++ +++.+|+++++
T Consensus 86 ~~~~~~~-----~~~---d~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v 152 (370)
T PRK05937 86 GLCAHLS-----SVT---DYVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSV 152 (370)
T ss_pred HHHHHhC-----CCC---CEEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecC
Confidence 3332221 244 7888889999999998887654333343 248999999987 34678889999
Q ss_pred CCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecc
Q 009181 283 GFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNR 362 (541)
Q Consensus 283 ~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~ 362 (541)
++++|.+.|+++|.++|+++|+++|||++++.+.++... .|. . ..+....++.+..+++|. ++|.|+++ ++.++
T Consensus 153 ~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g-~g~-~--~~~~~~~~~~~~~tlsK~-~g~~G~~v-l~~~~ 226 (370)
T PRK05937 153 YSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDG-KGF-C--HSLGYENFYAVLVTYSKA-LGSMGAAL-LSSSE 226 (370)
T ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCC-Cch-H--HhhCCCCCcEEEEechhh-hhcCceEE-EcCHH
Confidence 999999999999999999999999999999865543110 110 0 001111223445667798 78888885 44332
Q ss_pred cccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecCCCe
Q 009181 363 EIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGRPDM 441 (541)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~~~ 441 (541)
...........+.. .++-+...++++.++++.+...+ ....+++.++++++.+.|... ++
T Consensus 227 -~~~~~~~~~~~~~~--------s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~~~--------- 287 (370)
T PRK05937 227 -VKQDLMLNSPPLRY--------STGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAAPG--------- 287 (370)
T ss_pred -HHHHHHHhCCCCee--------cCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCCCC---------
Confidence 21111100111110 01111123556667777765544 456678888889998888643 11
Q ss_pred eEEEEecCCCCHHHHHHHHHhCCceeccCC--CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHcC
Q 009181 442 TIVAFGSDVVDIFEVNDIMSSKGWHLNPLQ--RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQN 505 (541)
Q Consensus 442 ~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~--~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~~ 505 (541)
..+.+..++.+..++.+.|.++|+.+.... ..+.+|++++.+++ +|+|++++.|+++++++.++
T Consensus 288 ~~~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~~ 354 (370)
T PRK05937 288 CVQPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQKN 354 (370)
T ss_pred CEEEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 112234444456788899999998765432 23689999998888 99999999999999887654
No 134
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.89 E-value=8.2e-21 Score=201.08 Aligned_cols=295 Identities=11% Similarity=0.041 Sum_probs=209.2
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhc
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF 246 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~ 246 (541)
.+..++.+.+.+++.+.++ ++.+ + ++|+|+++++.+++.++.+ +| ++|++++++|+.+...++.+
T Consensus 121 ~g~~~lr~~ia~~~~~~~~-~~~~----I--iit~G~~~al~~~~~~l~~-----pg---d~Vlv~~P~y~~~~~~~~~~ 185 (431)
T PRK15481 121 PVSPELHAWAARWLRDDCP-VAFE----I--DLTSGAIDAIERLLCAHLL-----PG---DSVAVEDPCFLSSINMLRYA 185 (431)
T ss_pred CCCHHHHHHHHHHHhhccC-CcCe----E--EEecCcHHHHHHHHHHhCC-----CC---CEEEEeCCCcHHHHHHHHHc
Confidence 3444555545555443322 2233 6 8999999999999998764 67 99999999999999999999
Q ss_pred CCeEEEeeCCCCCccCHHHHHHhhccCceEEEee-cCCCCCccccCHH---HHHHHHHHc-CCEEEEeCCcccchhhhhh
Q 009181 247 NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGS-APGFPHGIIDPIQ---ELGELALSH-GTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 247 G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~-~~~~~~G~id~i~---~I~~la~~~-~i~lhvD~a~gg~~~~f~~ 321 (541)
|++++.||+++++ +|+++|++++++++++++++ +|+||||.+.+.+ +|.++|++| ++++++|++|+.+...
T Consensus 186 g~~~~~v~~~~~g-~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~--- 261 (431)
T PRK15481 186 GFSASPVSVDAEG-MQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSS--- 261 (431)
T ss_pred CCeEEeeccCCCC-CCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccC---
Confidence 9999999997665 89999999998888887776 9999999999865 999999999 9999999999876421
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHH
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAAL 401 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al 401 (541)
+. .+.+... ..-.++..++.|....+..+|+++. ++++............ ......+++++.
T Consensus 262 --~~-~~~~~~~-~~~vi~~~SfSK~~~~GlRiG~~i~-~~~~~~~~~~~~~~~~-------------~~~s~~~q~a~~ 323 (431)
T PRK15481 262 --PY-HSVIPQT-TQRWALIRSVSKALGPDLRLAFVAS-DSATSARLRLRLNSGT-------------QWVSHLLQDLVY 323 (431)
T ss_pred --CC-CCCCcCC-CCCEEEEeeeccccCCCceeEEEeC-CHHHHHHHHHHHhccc-------------cCCCHHHHHHHH
Confidence 11 1112111 1224666788899554455897554 4443332211111000 001133566666
Q ss_pred HHHhHH----HHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceecc---CCC--
Q 009181 402 MSLGQE----GYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP---LQR-- 472 (541)
Q Consensus 402 ~~lg~~----g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~---~~~-- 472 (541)
..+... .+++..+.+.+..+++.+.|++. ++++..+..+.+++++++. +..++.+.|.++|+.+.. ++.
T Consensus 324 ~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~-~~~~~~~~l~~~gV~v~pg~~f~~~~ 401 (431)
T PRK15481 324 ACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDT-DSQATALTLAKSGWLVREGEAFGVSA 401 (431)
T ss_pred HHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCC-CHHHHHHHHHHCCcEEecCCccccCC
Confidence 555332 35667788888899999999887 7766556667777777754 567888999999976543 221
Q ss_pred -CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 473 -PNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 473 -~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
++++|+|++..+.++++++++.|++++.
T Consensus 402 ~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 402 PSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred CCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 2589999998777999999999998763
No 135
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=4.6e-20 Score=179.48 Aligned_cols=313 Identities=17% Similarity=0.210 Sum_probs=214.1
Q ss_pred cccchHHHHHHHHHHHHHHHHhCCCCCC--CCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH
Q 009181 163 LDIFQSVARFEAEVIAMTAALLGNKEKA--SGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g~~~~~--~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ 240 (541)
|..+.|.....+ .++++++-+.++ +.++| ++|+|.++|+.+++.++.+ +| .+|++|.+.++-+.
T Consensus 99 Yaps~G~~~AR~----AVAeYl~~~l~~kl~a~DV--~ltsGC~qAIe~~i~~LA~-----p~---aNILlPrPGfp~Y~ 164 (447)
T KOG0259|consen 99 YAPSVGILPARR----AVAEYLNRDLPNKLTADDV--VLTSGCSQAIELAISSLAN-----PG---ANILLPRPGFPLYD 164 (447)
T ss_pred cCCccccHHHHH----HHHHHhhcCCCCccCcCce--EEeccchHHHHHHHHHhcC-----CC---CceecCCCCCchHH
Confidence 444566555555 455554332211 22347 9999999999999999864 66 78999999999999
Q ss_pred HHHhhcCCeEEEeeCC--CCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccc
Q 009181 241 KAAQYFNIKLWRVPVD--KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~--~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~ 315 (541)
..+.+.|+++++...- .+|++|++.+|.++++||+++++.+|+||.|.+.+ +++|++.|+|+++.++.|++|+.+
T Consensus 165 ~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~ 244 (447)
T KOG0259|consen 165 TRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHT 244 (447)
T ss_pred HhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhccee
Confidence 9999999999999874 48999999999999999999999999999999865 999999999999999999999988
Q ss_pred hhhhhhhcCCCCCCCCcCCCCceEEEeC-CCCCCCCC-CCceEEEEeccccccccccc---ccccCCCccCCCcccCCCC
Q 009181 316 VLPFAKKLGYPIPPFDFSVQGVTSISVD-VHKYGLAP-KGTSVVLYRNREIRKHQFVA---VTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 316 ~~~f~~~~g~~~p~~~~~~~gvdsis~~-~hK~~~~p-~g~g~ll~~~~~~~~~~~~~---~~~~~~~~~~~~~~~gsr~ 390 (541)
++. .+-- +| ..-...-|-.++++ ..|--..| -..||++..++.-.-..-.. ...+..-. .-+
T Consensus 245 vfg--~~pf--vp-mg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~--------~~p 311 (447)
T KOG0259|consen 245 VFG--DKPF--VP-MGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDII--------PGP 311 (447)
T ss_pred ecC--CCCc--cc-hhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHhcc--------CCc
Confidence 762 1100 11 11112234455553 34542333 35999988776421110000 00000000 001
Q ss_pred CchH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEE-ecC-----CC-CHHHHHHHHHh
Q 009181 391 GGLI-AGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAF-GSD-----VV-DIFEVNDIMSS 462 (541)
Q Consensus 391 ~~~~-a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f-~~~-----~~-~~~~l~~~l~~ 462 (541)
...+ +|+-..|..--++-|.+...-+..+++...+.|+++|++.....|++.+..+ ... +. +..+++.+|.+
T Consensus 312 ~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~ 391 (447)
T KOG0259|consen 312 ATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAR 391 (447)
T ss_pred cHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhh
Confidence 1111 2233333333456788999999999999999999999999666666554433 321 22 45677777776
Q ss_pred CC-ce-e--ccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 463 KG-WH-L--NPLQRPNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 463 ~G-~~-~--~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
.- .+ + ..++.++++|++++. .++.+++.+++|++.-..-.
T Consensus 392 Eesv~~LPG~af~~~nw~Ri~i~~-~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 392 EESVICLPGQAFGLKNWLRIVITV-EEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred hcceEEeccccccCCCeEEEEEcc-ChHHHHHHHHHHHHHHHhhh
Confidence 65 32 3 346788999999996 44889999999999875433
No 136
>PRK07777 aminotransferase; Validated
Probab=99.89 E-value=2e-20 Score=195.42 Aligned_cols=307 Identities=15% Similarity=0.119 Sum_probs=214.1
Q ss_pred CCCCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCcc
Q 009181 159 NPLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAH 236 (541)
Q Consensus 159 n~~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h 236 (541)
...+|...++..++++.+.+++.+.+|.+ +++ ++ ++|+|+++|+..++.++.+ +| ++|+++.+.|
T Consensus 53 ~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~---~i--~~t~G~~~al~~~~~~~~~-----~g---d~vli~~p~y 119 (387)
T PRK07777 53 GVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDT---EV--LVTVGATEAIAAAVLGLVE-----PG---DEVLLIEPYY 119 (387)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---cE--EEeCCcHHHHHHHHHHhcC-----CC---CEEEEeCCCc
Confidence 33455556777888888888888888875 221 26 8999999999988887642 56 8999999999
Q ss_pred chHHHHHhhcCCeEEEeeCCC---CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeC
Q 009181 237 SAYDKAAQYFNIKLWRVPVDK---EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDL 310 (541)
Q Consensus 237 ~s~~ka~~~~G~~v~~v~~~~---~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~ 310 (541)
+.+..+++..|.+++.++.++ ++.+|++++++++++++.+|++++|+||||.+.+ +++|.++|++|++++++|+
T Consensus 120 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De 199 (387)
T PRK07777 120 DSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDE 199 (387)
T ss_pred hhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEec
Confidence 999999999999999999875 4679999999999999999999999999999865 8899999999999999999
Q ss_pred CcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccc--cccCCCccCCCcccC
Q 009181 311 CLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAV--TEWSGGLYVSPTVAG 387 (541)
Q Consensus 311 a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g 387 (541)
+|+.+... .....++..++ ...+.+++..+++|.+. .+..+|+++..+ ++........ ..|. .
T Consensus 200 ~y~~~~~~--~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~l~~~~~~~~~~~~~~----------~ 265 (387)
T PRK07777 200 VYEHLVFD--GARHLPLATLP-GMRERTVTISSAAKTFNVTGWKIGWACGPA-PLIAAVRAAKQYLTYV----------G 265 (387)
T ss_pred cchhcccC--CCCcccHhhCC-CCcCcEEEEeechhhccCcCceeEEEecCH-HHHHHHHHHHhhcccC----------C
Confidence 99876531 11000010111 12346788889999943 334479866543 3332211111 0111 0
Q ss_pred CCCCchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC---CCHHHHHHHHH-
Q 009181 388 SRPGGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV---VDIFEVNDIMS- 461 (541)
Q Consensus 388 sr~~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~---~~~~~l~~~l~- 461 (541)
+. . .+.++...+ +....++..+.+.++++++.+.|++. ++++..+....++++..++ .+..++++.|.
T Consensus 266 ~~---~--~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~ 339 (387)
T PRK07777 266 GA---P--FQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAGTYFLCADPRPLGYDDGTEFCRALPE 339 (387)
T ss_pred CC---H--HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCcceEEEecccccCCCCHHHHHHHHHH
Confidence 11 1 122222222 34566777888889999999999986 7776644444455556532 36788999996
Q ss_pred hCCceecc---CC-----CCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 009181 462 SKGWHLNP---LQ-----RPNSIHICVTLQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 462 ~~G~~~~~---~~-----~~~~iRi~~~~~~~e~id~~i~~L~~~~ 499 (541)
++|+.+.. +. .++++|++++. ..+++++.+++|+++.
T Consensus 340 ~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~-~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 340 RVGVAAIPMSVFYDPADAWNHLVRFAFCK-RDDTLDEAIRRLRALR 384 (387)
T ss_pred hCCEEEeCchHhCCCCcCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 56876533 11 13589999985 5688999888887654
No 137
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.89 E-value=1.6e-20 Score=199.93 Aligned_cols=307 Identities=12% Similarity=0.180 Sum_probs=214.0
Q ss_pred cccchHHHHHHHHHHHHHHHHhC----CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 163 LDIFQSVARFEAEVIAMTAALLG----NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g----~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
|....|..++.+.+.+++.+.+| +++++ | ++|+|+++++.+++.++.+ +| +.|+++.+.|+.
T Consensus 82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~----I--iit~Ga~~al~~l~~~l~~-----pG---d~Vlv~~P~Y~~ 147 (468)
T PLN02450 82 FQDYHGLPAFKNALAEFMSEIRGNKVTFDPNK----L--VLTAGATSANETLMFCLAE-----PG---DAFLLPTPYYPG 147 (468)
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCcChHH----e--EEccChHHHHHHHHHHhCC-----CC---CEEEECCCCCCc
Confidence 44455777788888888887766 34443 7 8999999999999998864 67 899999999999
Q ss_pred HHHHHh-hcCCeEEEeeCC--CCCccCHHHHHHhhcc------CceEEEeecCCCCCccccC---HHHHHHHHHHcCCEE
Q 009181 239 YDKAAQ-YFNIKLWRVPVD--KEFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCL 306 (541)
Q Consensus 239 ~~ka~~-~~G~~v~~v~~~--~~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~l 306 (541)
+...+. ..|++++.||++ +++.+|++++++++.+ +++++++++|+||||.+.+ +++|.++|++|++++
T Consensus 148 ~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~i 227 (468)
T PLN02450 148 FDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHL 227 (468)
T ss_pred hHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEE
Confidence 988888 589999999985 4678899999998864 6889999999999999977 667888899999999
Q ss_pred EEeCCcccchhhhhhhcCCCCCCCCc---------CCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccC
Q 009181 307 HVDLCLGGFVLPFAKKLGYPIPPFDF---------SVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWS 376 (541)
Q Consensus 307 hvD~a~gg~~~~f~~~~g~~~p~~~~---------~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~ 376 (541)
++|++|+.+.+. . ..+ .+.+.. ....-..+..++.|.. .++..+|+++..++.+....... ..+.
T Consensus 228 I~DE~Y~~~~f~--~-~~~-~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~-~~~~ 302 (468)
T PLN02450 228 ISDEIYSGTVFD--S-PGF-VSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKM-SSFG 302 (468)
T ss_pred EEEccccccccC--C-CCc-ccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHH-hhcC
Confidence 999999876431 0 000 000000 0122245677888974 36777998777655433321111 1110
Q ss_pred CCccCCCcccCCCCCchHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC
Q 009181 377 GGLYVSPTVAGSRPGGLIAGAWAALMSLGQ-----EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV 451 (541)
Q Consensus 377 ~~~~~~~~~~gsr~~~~~a~~~~al~~lg~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~ 451 (541)
. . ....+.++...+.. ..+++..+++.+.++.+.+.|++. ++.+..+....+++++.+..
T Consensus 303 -----------~-~--s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~~~g~flwi~l~~~ 367 (468)
T PLN02450 303 -----------L-V--SSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCLKSNAGLFCWVDMRHL 367 (468)
T ss_pred -----------C-C--CHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCceEEEEEEchHh
Confidence 0 0 02245555554533 245667888888899999999987 77765443444667775421
Q ss_pred -------CHHHHHHHHH-hCCceeccC-----CCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 452 -------DIFEVNDIMS-SKGWHLNPL-----QRPNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 452 -------~~~~l~~~l~-~~G~~~~~~-----~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
...++.+.+. +.|+.+..- ..++++|+|++....+++++.+++|+++++...
T Consensus 368 ~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 368 LKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred cCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHhcc
Confidence 1234555555 578766432 235799999997667899999999999887655
No 138
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.8e-20 Score=196.13 Aligned_cols=309 Identities=14% Similarity=0.127 Sum_probs=210.1
Q ss_pred CcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH
Q 009181 162 HLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (541)
Q Consensus 162 ~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~ 239 (541)
.|....+...+.+.+.+++...++. ++.+ + ++|+|+++++..++.++.. +| ++|++++++|..+
T Consensus 68 ~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~----i--~~t~G~~~al~~~~~~l~~-----~g---d~Vli~~p~~~~~ 133 (394)
T PRK06836 68 GYMPNAGYPEVREAIAESLNRRFGTPLTADH----I--VMTCGAAGALNVALKAILN-----PG---DEVIVFAPYFVEY 133 (394)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCCcCc----E--EEeCChHHHHHHHHHHhcC-----CC---CEEEEcCCCCccH
Confidence 3434456666777677777665543 4444 6 8999999999999988743 56 8999999999999
Q ss_pred HHHHhhcCCeEEEeeCCCC-CccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHH------cCCEEEEe
Q 009181 240 DKAAQYFNIKLWRVPVDKE-FRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALS------HGTCLHVD 309 (541)
Q Consensus 240 ~ka~~~~G~~v~~v~~~~~-~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~------~~i~lhvD 309 (541)
...++..|++++.+|++++ +.+|++++++++++++++|++++|+||||.+.| +++|+++|++ ||+++++|
T Consensus 134 ~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~D 213 (394)
T PRK06836 134 RFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISD 213 (394)
T ss_pred HHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEe
Confidence 9999999999999999864 789999999999999999999999999999977 6678888998 89999999
Q ss_pred CCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCC
Q 009181 310 LCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGS 388 (541)
Q Consensus 310 ~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs 388 (541)
++|+.+... +...+.+ ....+-..+..++.|.+. .+.++|+++..+. ........ ..+... ... .+.
T Consensus 214 e~y~~~~~~-----~~~~~~~-~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~-~~~~~~~~-~~~~~~---~~~-~~~ 281 (394)
T PRK06836 214 EPYREIVYD-----GAEVPYI-FKYYDNSIVVYSFSKSLSLPGERIGYIAVNPE-MEDADDLV-AALVFA---NRI-LGF 281 (394)
T ss_pred ccccccccC-----CCCCCCh-HHccCcEEEEecchhhccCcceeeEEEecCHH-HhhhHHHH-HHHHHH---hhc-ccc
Confidence 999876431 1001111 111223567778999843 4556898776433 21110000 000000 000 000
Q ss_pred CCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceec
Q 009181 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLN 468 (541)
Q Consensus 389 r~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~ 468 (541)
.......+.++...+.. + ...+...+.++.+.+.|++. ++++..+....+++.+.+..+..++.+.|.+.|+.+.
T Consensus 282 -~~~~~~~q~~~~~~l~~-~--~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~~~~~~~~~~l~~~gv~v~ 356 (394)
T PRK06836 282 -VNAPALMQRVVAKCLDA-T--VDVSIYKRNRDLLYDGLTEL-GFECVKPQGAFYLFPKSPEEDDVAFCEKAKKHNLLLV 356 (394)
T ss_pred -ccCCHHHHHHHHHHhCC-h--HHHHHHHHHHHHHHHHHHhC-CCEeecCCceEEEEEeCCCCCHHHHHHHHHhCCEEEE
Confidence 00011234444444432 1 12345666778888888887 7776644444556666655577888899999997664
Q ss_pred cC---CCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 469 PL---QRPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 469 ~~---~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
.. ..++++||+++ .+.+++++.+++|+++++..
T Consensus 357 ~g~~f~~~~~iRi~~~-~~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 357 PGSGFGCPGYFRLSYC-VDTETIERSLPAFEKLAKEY 392 (394)
T ss_pred CchhcCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHh
Confidence 32 33579999998 46699999999999998654
No 139
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.89 E-value=1.6e-20 Score=198.03 Aligned_cols=298 Identities=15% Similarity=0.114 Sum_probs=205.9
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHH---H-
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK---A- 242 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~k---a- 242 (541)
+....+|+.+++.+++++|.+... +++++||+|+..++.++.. +| ++|+++.++|.++.. .
T Consensus 67 ~~~~~~e~~~~~~la~~~g~~~~~-------i~~~sgt~al~~~l~~l~~-----~g---d~Vl~~~~~~~~~~~~~~~~ 131 (416)
T PRK00011 67 EYVDVVEQLAIDRAKELFGAEYAN-------VQPHSGSQANAAVYFALLK-----PG---DTILGMDLAHGGHLTHGSPV 131 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcee-------eecCCchHHHHHHHHHhcC-----CC---CEEEEeccccCCcccccccc
Confidence 446667777888999999998654 3444568899888887742 66 899999999976432 1
Q ss_pred -HhhcCCeEEEeeCCC-CCccCHHHHHHhhcc-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhh
Q 009181 243 -AQYFNIKLWRVPVDK-EFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPF 319 (541)
Q Consensus 243 -~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f 319 (541)
....|++++.+++++ ++.+|++++++++++ +|++|+++.++ +|...|+++|+++|++||+++++|++++.+...
T Consensus 132 ~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~--~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~- 208 (416)
T PRK00011 132 NFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASA--YSRPIDFKRFREIADEVGAYLMVDMAHIAGLVA- 208 (416)
T ss_pred ccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCc--CCCccCHHHHHHHHHHcCCEEEEECcchhcccc-
Confidence 223467888888874 689999999999975 78888876544 567789999999999999999999997543221
Q ss_pred hhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHH
Q 009181 320 AKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 320 ~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
.|. . +..+. ++|+++.++||++.+|. .|++++.++++..........+. .++.....+++...
T Consensus 209 ---~g~-~-~~~~~--~~di~~~S~~K~l~g~~-gg~i~~~~~~~~~~l~~~~~~~~---------~~~~~~~~~aa~~~ 271 (416)
T PRK00011 209 ---AGV-H-PSPVP--HADVVTTTTHKTLRGPR-GGLILTNDEELAKKINSAVFPGI---------QGGPLMHVIAAKAV 271 (416)
T ss_pred ---cCc-c-CCCCC--CCcEEEecCCcCCCCCC-ceEEEeCCHHHHHHHHHHhCccc---------cCCccHHHHHHHHH
Confidence 111 1 12222 68999999999865555 45667655554432211111110 11112223455555
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEec-CCCeeEEEEecCCC--CHHHHHHHHHhCCceecc----C--
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIG-RPDMTIVAFGSDVV--DIFEVNDIMSSKGWHLNP----L-- 470 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~~~~~~v~f~~~~~--~~~~l~~~l~~~G~~~~~----~-- 470 (541)
++.....+++++..+++.++++++++.|++. |+++.. ....+++++...+. +..++.+.|.++|+.+.. +
T Consensus 272 a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~ 350 (416)
T PRK00011 272 AFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDP 350 (416)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCC
Confidence 6555555678899999999999999999987 788763 23457777776532 567888999999987652 1
Q ss_pred C---CCCeEEEEecC-----CCHHHHHHHHHHHHHHHH
Q 009181 471 Q---RPNSIHICVTL-----QHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 471 ~---~~~~iRi~~~~-----~~~e~id~~i~~L~~~~~ 500 (541)
+ .+..+|++... .+.+|++++++.|+++++
T Consensus 351 ~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 351 RSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred CCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence 1 23568985422 234899999999998765
No 140
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.89 E-value=5.2e-21 Score=197.62 Aligned_cols=287 Identities=16% Similarity=0.175 Sum_probs=198.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeE
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKL 250 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v 250 (541)
....++++.+++++|.+. . +++++|++++..++.++. ++| ++|+++.+.|+++...++..|+++
T Consensus 61 ~~~~~l~~~la~~~~~~~-~-------i~~~~G~~~~~~~l~~~~-----~~g---d~v~~~~~~~~~~~~~~~~~g~~~ 124 (360)
T TIGR00858 61 PLHEELEEELAEWKGTEA-A-------LLFSSGYLANVGVISALV-----GKG---DLILSDALNHASLIDGCRLSGARV 124 (360)
T ss_pred HHHHHHHHHHHHHhCCCC-E-------EEECchHHHHHHHHHHhC-----CCC---CEEEEEccccHHHHHHHHhcCCce
Confidence 445557778888888543 2 455555777777766653 256 899999999999999999999999
Q ss_pred EEeeCCCCCccCHHHHHHhhcc----CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCC
Q 009181 251 WRVPVDKEFRADVKAIKKYINR----NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYP 326 (541)
Q Consensus 251 ~~v~~~~~~~~d~~~Le~~i~~----~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~ 326 (541)
+.++. +|++++++++++ +++++++.++++++|.+.|+++|.++|+++|+++++|++|+.+.++. .+..
T Consensus 125 ~~~~~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~---~~~~ 196 (360)
T TIGR00858 125 RRYRH-----NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGE---DGRG 196 (360)
T ss_pred EEecC-----CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCC---CCCc
Confidence 88874 589999999875 47899999999999999999999999999999999999997544321 1100
Q ss_pred -CCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh
Q 009181 327 -IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG 405 (541)
Q Consensus 327 -~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg 405 (541)
.+.++....+.+++..+++|+ +++.| |+++. ++++..........|.. .++.....++++.++++.+.
T Consensus 197 ~~~~~~~~~~~~~i~i~s~sK~-~~~~g-G~~~~-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~a~~~al~~~~ 265 (360)
T TIGR00858 197 TLEHFGLKPEPVDIQVGTLSKA-LGSYG-AYVAG-SQALIDYLINRARTLIF--------STALPPAVAAAALAALELIQ 265 (360)
T ss_pred hHHhcCCCccCCcEEEEechhh-hhccC-cEEEc-CHHHHHHHHHhCcccee--------cCCCCHHHHHHHHHHHHHHh
Confidence 111222234668888999998 67766 76554 44433221111111100 01111112334455554432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-CHHHHHHHHHhCCceeccC------CCCCeEEE
Q 009181 406 QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV-DIFEVNDIMSSKGWHLNPL------QRPNSIHI 478 (541)
Q Consensus 406 ~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~-~~~~l~~~l~~~G~~~~~~------~~~~~iRi 478 (541)
..++..++..++++++.+.|+++ ++++. ++..+++++...+. +..++.+.|.++|+.+... ..++++|+
T Consensus 266 --~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRi 341 (360)
T TIGR00858 266 --EEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIGDNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRL 341 (360)
T ss_pred --hCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEE
Confidence 23567889999999999999987 67655 45667788877542 4678999999999877431 12358999
Q ss_pred EecCCCH-HHHHHHHHHHH
Q 009181 479 CVTLQHV-AVVDVFLRDLR 496 (541)
Q Consensus 479 ~~~~~~~-e~id~~i~~L~ 496 (541)
+++..++ +|+++++++|+
T Consensus 342 s~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 342 TLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred EEcCCCCHHHHHHHHHhhC
Confidence 9997766 99999998774
No 141
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.89 E-value=6.5e-21 Score=200.61 Aligned_cols=293 Identities=15% Similarity=0.084 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEE
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~ 252 (541)
..++++.+++++|.+ .. +++++|++|+..++.++.. ..+| +.|+++...|+++..+++..|+++..
T Consensus 93 ~~~Le~~la~~~g~~-~~-------i~~~sG~~a~~~~i~~l~~---~~~g---~~vi~~~~~h~s~~~~~~~~g~~~~~ 158 (410)
T PRK13392 93 HVLLERELADLHGKE-SA-------LLFTSGYVSNDAALSTLGK---LLPG---CVILSDALNHASMIEGIRRSGAEKQV 158 (410)
T ss_pred HHHHHHHHHHHhCCC-CE-------EEECcHHHHHHHHHHHHhc---CCCC---CEEEEehhhhHHHHHHHHHcCCeEEE
Confidence 446777999999964 32 4555568888888886532 1244 78888888999998889999999887
Q ss_pred eeCCCCCccCHHHHHHhhc----cCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCC
Q 009181 253 VPVDKEFRADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIP 328 (541)
Q Consensus 253 v~~~~~~~~d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p 328 (541)
++.+ |.+++++.++ ++|++|++++|+||+|.+.|+++|.++|++||+++++|++|+.+.+ ...|....
T Consensus 159 ~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~---g~~g~g~~ 230 (410)
T PRK13392 159 FRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLY---GARGGGIA 230 (410)
T ss_pred EeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCc---CCCCCchh
Confidence 7653 4555555553 5789999999999999999999999999999999999999983332 11111111
Q ss_pred CCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHH
Q 009181 329 PFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEG 408 (541)
Q Consensus 329 ~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g 408 (541)
...-....+|.++.+++|. ++..| |++. .++++..........|..+ .+.+....+++.++++.+..
T Consensus 231 ~~~~~~~~~div~~tlsK~-~g~~G-G~~~-~~~~~~~~l~~~~~~~~~s--------~~~~~~~~~a~~aaL~~~~~-- 297 (410)
T PRK13392 231 ERDGLMDRIDMIQGTLAKA-FGCLG-GYIA-ASADLIDFVRSFAPGFIFT--------TALPPAVAAGATAAIRHLKT-- 297 (410)
T ss_pred hhccCCCCCcEEEEEChHh-hhccc-chhh-cCHHHHHHHHHhCcchhcc--------CcCCHHHHHHHHHHHHHHhc--
Confidence 1111123568888899998 44444 6544 3444443222112222111 11111224455566654432
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-CHHHHHHHHH-hCCceeccCCC------CCeEEEEe
Q 009181 409 YLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV-DIFEVNDIMS-SKGWHLNPLQR------PNSIHICV 480 (541)
Q Consensus 409 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~-~~~~l~~~l~-~~G~~~~~~~~------~~~iRi~~ 480 (541)
.....++..++++++.+.|+++ |+++. ++..+++.+..... +..++.+.|. ++|+.+..... ...+|+++
T Consensus 298 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~ 375 (410)
T PRK13392 298 SQTERDAHQDRVAALKAKLNAN-GIPVM-PSPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITP 375 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEE
Confidence 2345577888899999999987 77765 44556655544322 4568888886 67987764322 25899999
Q ss_pred cCCCH-HHHHHHHHHHHHHHHHH
Q 009181 481 TLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 481 ~~~~~-e~id~~i~~L~~~~~~l 502 (541)
+..++ +|+|++++.|+++.+++
T Consensus 376 ~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 376 TPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHc
Confidence 87776 99999999999987664
No 142
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=3.6e-21 Score=198.54 Aligned_cols=280 Identities=15% Similarity=0.153 Sum_probs=201.2
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++.+|+++++ | ++|+|+++++.+++.++.. +| .++|+++.+.|+.+...++..|++++.+|
T Consensus 64 ~Lr~aia~~~~~~~~~----I--~it~Gs~~~i~~~~~~~~~-----~g--~d~vlv~~P~y~~y~~~~~~~g~~v~~v~ 130 (354)
T PRK04635 64 ELINAYSAYAGVAPEQ----I--LTSRGADEAIELLIRAFCE-----PG--QDSIACFGPTYGMYAISAETFNVGVKALP 130 (354)
T ss_pred HHHHHHHHHhCcCHHH----E--EEeCCHHHHHHHHHHHhcC-----CC--CCeEEEcCCChHHHHHHHHHcCCEEEEEe
Confidence 4566888889998876 7 8999999999999988753 32 16799999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHc-CCEEEEeCCcccchhhhhhhcCCCCCCCCcC
Q 009181 255 VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH-GTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS 333 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~-~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~ 333 (541)
+++++.+|++.+++ + +++++|++++|+||||.+.|.+++.++++.. ++++++|++|..|... .. .+.+...
T Consensus 131 ~~~~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~---~s---~~~~~~~ 202 (354)
T PRK04635 131 LTADYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPE---YS---VADLLAS 202 (354)
T ss_pred cCCCCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccC---cc---hHHHHhh
Confidence 98788999999974 4 6899999999999999999999999999874 7999999999765421 00 0011001
Q ss_pred CCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh---HHHH
Q 009181 334 VQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG---QEGY 409 (541)
Q Consensus 334 ~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg---~~g~ 409 (541)
... -++..+++|+. .++..+|+++. ++++..........|.. ....+.+++..+. .+.+
T Consensus 203 ~~~-~iv~~S~SK~~~l~GlRlG~~i~-~~~~~~~l~~~~~~~~~---------------~~~~~~~a~~~l~~~~~~~~ 265 (354)
T PRK04635 203 YPN-LVVLRTLSKAFALAGARCGFTLA-NEELIEILMRVIAPYPV---------------PLPVSEIATQALSEAGLARM 265 (354)
T ss_pred CCC-EEEEechHHHhhhhHHHHhhhhC-CHHHHHHHHhhcCCCCC---------------CHHHHHHHHHHHhcccHHHH
Confidence 122 25567889993 24445898655 44444322111111110 0113334444442 3445
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCC---CCCeEEEEecCCCHH
Q 009181 410 LENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQ---RPNSIHICVTLQHVA 486 (541)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~---~~~~iRi~~~~~~~e 486 (541)
++..+...+.++++.+.|++++++++. ++..++++++.+ +..++.+.|.++|+.+.... .++++|+|++ +.+
T Consensus 266 ~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~--~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~--~~e 340 (354)
T PRK04635 266 KFQVLDLNAQGARLQAALSMYGGAKVL-EGNGNYVLAKFD--DVDAVFKALWDAGIVARAYKDPRLANCIRFSFS--NRA 340 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCcEEEEECC--CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC--CHH
Confidence 666777788889999999998767765 556677777665 56788889999998765432 3578999986 469
Q ss_pred HHHHHHHHHHH
Q 009181 487 VVDVFLRDLRE 497 (541)
Q Consensus 487 ~id~~i~~L~~ 497 (541)
++++++++|++
T Consensus 341 ~~~~l~~al~~ 351 (354)
T PRK04635 341 ETDKLIGLIRN 351 (354)
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 143
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.88 E-value=1.1e-20 Score=198.48 Aligned_cols=294 Identities=16% Similarity=0.134 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeE
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKL 250 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v 250 (541)
....++.+.+++++|.+ . . +++++|++|+..++.+++.. .+| +.|+.+...|.+....+...|+++
T Consensus 90 ~~~~~Le~~la~~~g~~-~-----~--l~~~sG~~an~~ai~~l~~~---~~~---~~v~~~~~~h~s~~~~~~~~g~~~ 155 (402)
T TIGR01821 90 IPHVELEAELADLHGKE-S-----A--LVFTSGYVANDATLATLAKI---IPG---CVIFSDELNHASMIEGIRHSGAEK 155 (402)
T ss_pred HHHHHHHHHHHHHhCCC-e-----E--EEECchHHHHHHHHHHhhCC---CCC---CEEEEcchHhHHHHHHHHHcCCeE
Confidence 34456777999999864 2 2 67777899999999887632 123 667777778999988888899888
Q ss_pred EEeeCCCCCccCHHHHHHhhc----cCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCC
Q 009181 251 WRVPVDKEFRADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYP 326 (541)
Q Consensus 251 ~~v~~~~~~~~d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~ 326 (541)
..++.+ |.+++++.++ +++++|++++++|++|.+.|+++|.++|++||+++++|++|+.+.+ ...|..
T Consensus 156 ~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~---g~~g~g 227 (402)
T TIGR01821 156 FIFRHN-----DVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLY---GPRGGG 227 (402)
T ss_pred EEECCC-----CHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCccccccc---CCCCCc
Confidence 776643 7778888775 3688999999999999999999999999999999999999974332 111111
Q ss_pred CCC-CCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh
Q 009181 327 IPP-FDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG 405 (541)
Q Consensus 327 ~p~-~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg 405 (541)
... .+ ....+|++..++.|. ++..| |+++ .++++..........|. ..++.+....+++.++++.+.
T Consensus 228 ~~~~~~-~~~~~div~~t~sKa-~g~~G-G~i~-~~~~~~~~l~~~~~~~~--------~t~~~~~~~~aaa~aaL~~~~ 295 (402)
T TIGR01821 228 IAERDG-LMHRIDIIEGTLAKA-FGVVG-GYIA-ASRKLIDAIRSYAPGFI--------FTTSLPPAIAAGATASIRHLK 295 (402)
T ss_pred cchhcc-CCCCCeEEEEechhh-hccCC-ceee-cCHHHHHHHHHhCcCce--------ecCcCCHHHHHHHHHHHHHhh
Confidence 111 11 123468888889999 55554 5544 34443332211111111 011112222345555665443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-CHHHHHHHHHh-CCceeccCCC------CCeEE
Q 009181 406 QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV-DIFEVNDIMSS-KGWHLNPLQR------PNSIH 477 (541)
Q Consensus 406 ~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~-~~~~l~~~l~~-~G~~~~~~~~------~~~iR 477 (541)
.. ....++..++++++.+.|+++ +++++. +..+++.+..... ...++.+.|.+ +|+.+..... ...+|
T Consensus 296 ~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lR 371 (402)
T TIGR01821 296 ES--QDLRRAHQENVKRLKNLLEAL-GIPVIP-NPSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLR 371 (402)
T ss_pred cC--HHHHHHHHHHHHHHHHHHHHc-CCCcCC-CCCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEE
Confidence 32 445566678899999999887 777664 3556666655332 35678888864 5877654322 25799
Q ss_pred EEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 478 ICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 478 i~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
++++..++ +|++++++.|+++++++
T Consensus 372 is~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 372 ITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 99988777 99999999999998765
No 144
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=2e-22 Score=199.69 Aligned_cols=430 Identities=13% Similarity=0.124 Sum_probs=290.0
Q ss_pred hhccCCchhHhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHhcCcchhHHHHHHHhhhhcccCCCcccc---c
Q 009181 20 FLSQYEPVILLLAPLLTLLVARVLQSFLDAVREKGFKQTFVAFFMSSIKLVPGVNKYIEAEKQKVVDKMQSGVKSK---R 96 (541)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~ 96 (541)
.+.+++||.+++.|++.|+++.++ +++++++-+++...-+.+....+...++.++++..+.++ +
T Consensus 32 ~~~~~~~~~v~l~ty~~y~~l~~~-------------ghvrd~~~~~f~~~~~~~~~~~~g~~ply~~Fe~FY~Rriy~r 98 (519)
T KOG1357|consen 32 KFEDTIPYLVALATYLSYLLLFVF-------------GHVRDFFGKIFFVKKYKKDNEMDGYAPLYSSFESFYSRRIYRR 98 (519)
T ss_pred hhhcccccHHHHHHHHHHHHHHHH-------------HHHHHHHhhheehhhhcccccccCccchhhhHHHHHHHHHHHH
Confidence 367899999999999999999888 555565555554422333322345677788888877765 6
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHhC-CCCCCC--C------CceeeeecCCCCccc-HHHHHHHHHHhhcccCCCCcccc
Q 009181 97 EGWWTELPRAGLGVGVIEKLKEEKG-KDVVWQ--G------KCSGTVYIGGSEAEG-HFSLINEACSMFAHTNPLHLDIF 166 (541)
Q Consensus 97 ~~~~~~lP~~g~~~~i~~~l~~~~~-~~~~~~--~------~~~g~~y~~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~ 166 (541)
...+++-|-.|.+...++.++++.. .+-.|. | +++.+.|.+..+... +.+...+.+..+... ......-
T Consensus 99 i~Dc~~RPi~~VPG~~v~l~dR~S~D~n~tfk~tG~~~~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~-~css~~e 177 (519)
T KOG1357|consen 99 IRDCFERPICSVPGAWVDLMDRVSDDYNWTFKYTGTRSRCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLS-RCSSRHE 177 (519)
T ss_pred HhHhhcCCCcCCCCceEEeeeeeccCCCceEEeccceeeeeeecccccccccccCCcCChHHHHHHHHhccc-ccccchh
Confidence 6788999988887555555555522 222222 2 344455555444222 445555666555332 2333344
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCc-HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhh
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSG-GTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY 245 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~G-gt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~ 245 (541)
-+.....+|+.+.+|+++|.+.. + +|..| +|.| +.+-++.. +| .-|+-.+..|.|+...|++
T Consensus 178 ~G~~~~hkelE~l~A~f~g~e~a-----~--vF~mGf~TNs--~~~p~l~~-----~g---sLIiSDelNHaSi~~GaRL 240 (519)
T KOG1357|consen 178 AGTTEEHKELEELVARFLGVEDA-----I--VFSMGFATNS--MNIPSLLG-----KG---SLIISDELNHASLITGARL 240 (519)
T ss_pred cccHHHHHHHHHHHHHhcCCcce-----E--EEeccccccc--cCcceeec-----CC---cceeeccccchheeccccc
Confidence 57788899999999999999875 3 66666 3433 33333332 55 7788899999999999999
Q ss_pred cCCeEEEeeCCCCCccCHHHHHHhhccC-------------ceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCc
Q 009181 246 FNIKLWRVPVDKEFRADVKAIKKYINRN-------------TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (541)
Q Consensus 246 ~G~~v~~v~~~~~~~~d~~~Le~~i~~~-------------t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~ 312 (541)
.|+.++....+ |..+||+.+.+. ..+|++..-...-|.+++++++.++++||...|+.|+|+
T Consensus 241 SgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAH 315 (519)
T KOG1357|consen 241 SGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAH 315 (519)
T ss_pred cCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccc
Confidence 99999999988 788888877541 256777777778999999999999999999999999999
Q ss_pred ccchhhhhhhcCCC-CCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCC
Q 009181 313 GGFVLPFAKKLGYP-IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG 391 (541)
Q Consensus 313 gg~~~~f~~~~g~~-~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~ 391 (541)
..++++ +.|.. +.-+......+|++...+.|.+ +..| | .+..++++.......... ...++...
T Consensus 316 SiGA~g---~tGrgvce~~g~d~~dvDImMGtftKSf-ga~G-G-yiagsk~lid~lrt~s~~---------~~yat~~s 380 (519)
T KOG1357|consen 316 SIGAMG---ATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAG-G-YIAGSKELIDYLRTPSPS---------ALYATSLS 380 (519)
T ss_pred cccccC---CCCcceeeccCCCchhheeecceehhhc-cccc-c-eecCcHHHHhhhccCCCc---------eeecccCC
Confidence 888773 33332 2223334455799999999984 3322 2 455555554432211110 11111111
Q ss_pred chHHHHH-HHHHHH----hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecC-CCCHHHHHHHHHhCCc
Q 009181 392 GLIAGAW-AALMSL----GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSD-VVDIFEVNDIMSSKGW 465 (541)
Q Consensus 392 ~~~a~~~-~al~~l----g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~-~~~~~~l~~~l~~~G~ 465 (541)
+.++.+- -+++.+ |.+..++.++++.++++|++..+++. ++.+.+..+.+++.+-+- ......+.+.|.++++
T Consensus 381 ppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~k~~~f~r~~l~~ni 459 (519)
T KOG1357|consen 381 PPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPAKIVAFSREMLERNI 459 (519)
T ss_pred hHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCcccccHHHHHHHhcCc
Confidence 1222222 233332 45678899999999999999999987 999999888877766543 3356677888888886
Q ss_pred eeccCCCC------CeEEEEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 466 HLNPLQRP------NSIHICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 466 ~~~~~~~~------~~iRi~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
.+...++| ...|+|.+..++ |++|++++.+.+.-++
T Consensus 460 gvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 460 GVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGDE 502 (519)
T ss_pred eEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhchh
Confidence 65555555 356999988887 9999999988887644
No 145
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1.8e-20 Score=194.76 Aligned_cols=293 Identities=14% Similarity=0.133 Sum_probs=205.1
Q ss_pred hHHHHHHHHHHHHHHHHhC----CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCC-eEEecCCccchHHH
Q 009181 167 QSVARFEAEVIAMTAALLG----NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRP-EMIIPVSAHSAYDK 241 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g----~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~-~vi~~~~~h~s~~k 241 (541)
++..++.+.+.+++.+.+| +++++ | ++|+|+++++..++.+... +| + +|+++.++|+.+..
T Consensus 66 ~G~~~Lr~aia~~~~~~~~~~~~v~~~~----I--~it~Ga~~al~~~~~~~~~-----~g---~~~Vlv~~P~y~~~~~ 131 (374)
T PRK02610 66 GGHEALKQAIAEYVNESAAGSSQITPAN----I--SVGNGSDELIRSLLIATCL-----GG---EGSILVAEPTFSMYGI 131 (374)
T ss_pred CchHHHHHHHHHHhCccccccCCCCHHH----E--EEcCChHHHHHHHHHHHcC-----CC---CCeEEEcCCChHHHHH
Confidence 5666677766666655432 55554 6 8999999999887776543 33 4 79999999999999
Q ss_pred HHhhcCCeEEEeeCCC-CCccCHHHHHHhhc----cCceEEEeecCCCCCccccCHHHHHHHHHH-cCCEEEEeCCcccc
Q 009181 242 AAQYFNIKLWRVPVDK-EFRADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDPIQELGELALS-HGTCLHVDLCLGGF 315 (541)
Q Consensus 242 a~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~i~~I~~la~~-~~i~lhvD~a~gg~ 315 (541)
+++.+|++++.+++++ ++.+|+++|+++++ ++++++++++|+||||.+.+.+++.++++- +++++++|++|..|
T Consensus 132 ~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~ 211 (374)
T PRK02610 132 LAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEF 211 (374)
T ss_pred HHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEecccccc
Confidence 9999999999999876 58999999999987 478999999999999999887766665532 48999999999866
Q ss_pred hhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchH
Q 009181 316 VLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLI 394 (541)
Q Consensus 316 ~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~ 394 (541)
... .. .+.+. .... .++..++.|.. ..+..+|+++. ++++..........|.. ..
T Consensus 212 ~~~--~~----~~~~~-~~~~-~ivi~SfSK~~g~~GlRiG~~v~-~~~l~~~l~~~~~~~~~---------------~~ 267 (374)
T PRK02610 212 SQT--TL----VGELA-QHPN-WVILRTFSKAFRLAAHRVGYAIG-HPELIAVLEKVRLPYNL---------------PS 267 (374)
T ss_pred Ccc--ch----HHHHh-cCCC-EEEEEecchhccCcccceeeeec-CHHHHHHHHHhcCCCCC---------------CH
Confidence 320 00 11111 1112 34567888995 46666998764 44444322111111110 12
Q ss_pred HHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-CCHHHHHHHHHhCCceeccCCC
Q 009181 395 AGAWAALMSLGQ-EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-VDIFEVNDIMSSKGWHLNPLQR 472 (541)
Q Consensus 395 a~~~~al~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~~~~~l~~~l~~~G~~~~~~~~ 472 (541)
..+.++...++. +.+.+..++..+.++.+.+.|++++++.+. ++...+++++.++ .+..++.+.|.++|+.+.. .
T Consensus 268 ~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~--~ 344 (374)
T PRK02610 268 FSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVW-PSAANFLYLRLSQDAALAALHQALKAQGTLVRH--T 344 (374)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-CCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEe--C
Confidence 244444444432 445555566666678888889888888754 5567777887764 3778899999999987753 3
Q ss_pred CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 473 PNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 473 ~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
++++|+|++. .+++++++++|+++++.+
T Consensus 345 ~~~lRls~~~--~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 345 GGGLRITIGT--PEENQRTLERLQAALTQL 372 (374)
T ss_pred CCeEEEeCCC--HHHHHHHHHHHHHHHhhc
Confidence 4689999874 577899999999887654
No 146
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.88 E-value=5e-21 Score=189.48 Aligned_cols=308 Identities=16% Similarity=0.107 Sum_probs=212.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCceeeeecCCCCcccHHHHHHHHHHhhcccC-CCCcccchHHHHHHHHHHHHHHHHhCCCC
Q 009181 110 VGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLINEACSMFAHTN-PLHLDIFQSVARFEAEVIAMTAALLGNKE 188 (541)
Q Consensus 110 ~~i~~~l~~~~~~~~~~~~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n-~~~~~~~~~~~~~e~ev~~~la~l~g~~~ 188 (541)
..++.++.++...+..-++ .|.-++... .++.+.+++.+..... ..+|....|..++...+++.+++++|...
T Consensus 17 ~~vw~e~~~la~e~~~~~~--LgqGfp~~~----~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~ 90 (420)
T KOG0257|consen 17 PYVWTEINRLAAEHKVPNP--LGQGFPDFP----PPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLL 90 (420)
T ss_pred CcHHHHHHHHHHhcCCCCc--ccCCCCCCC----CcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhcccc
Confidence 4566666665322211111 333333333 3567777776665553 34455566788889989999999888542
Q ss_pred CCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCC--------CCCc
Q 009181 189 KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD--------KEFR 260 (541)
Q Consensus 189 ~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~--------~~~~ 260 (541)
.. .++| ++|.|+.+++..+++++.+ +| |+|++.++.+.++.-...+.|.+.+.||.. +++.
T Consensus 91 ~~-~~eV--lVT~GA~~ai~~~~~~l~~-----~G---DeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~ 159 (420)
T KOG0257|consen 91 DP-DDEV--LVTAGANEAISSALLGLLN-----PG---DEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWT 159 (420)
T ss_pred CC-cccE--EEecCchHHHHHHHHHHcC-----CC---CEEEEecCcchhhhhHHhhcCCcceeeccccccccccCcccc
Confidence 11 1147 9999999999999999987 78 999999999999999999999999999987 3789
Q ss_pred cCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc
Q 009181 261 ADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV 337 (541)
Q Consensus 261 ~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv 337 (541)
+|.+.+|.+++++|++|+++.|+||+|.+.+ |++|+++|++||++++.|++|..++. +... -+.+... +|.
T Consensus 160 ~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~---d~~~--h~r~asl-Pgm 233 (420)
T KOG0257|consen 160 LDPEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVY---DGNK--HIRIASL-PGM 233 (420)
T ss_pred CChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhh---CCCc--ceeeecC-Cch
Confidence 9999999999999999999999999999977 88999999999999999999976654 1111 1122222 554
Q ss_pred ---eEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHH--HHhH-HHH
Q 009181 338 ---TSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALM--SLGQ-EGY 409 (541)
Q Consensus 338 ---dsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~--~lg~-~g~ 409 (541)
+.-..|+.|. ++..| .||++. ++.+.........+.... ..++.+ .+..++....+. .-+. ...
T Consensus 234 ~ertitvgS~gKt-f~~TGWrlGW~ig-p~~L~~~~~~vh~~~~~~-~~Tp~q-----~A~a~a~~~~~~~~~p~~~y~~ 305 (420)
T KOG0257|consen 234 YERTITVGSFGKT-FGVTGWRLGWAIG-PKHLYSALFPVHQNFVFT-CPTPIQ-----EASAAAFALELACLQPGGSYFI 305 (420)
T ss_pred hheEEEeccccce-eeeeeeeeeeeec-hHHhhhhHHHHhhccccc-cCcHHH-----HHHHHHHhhhhhccCCcchhHH
Confidence 5556688899 77777 899777 555544332222221111 001100 011112222221 0111 223
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecC
Q 009181 410 LENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSD 449 (541)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~ 449 (541)
.++.+...++++.|.+.|.++ |+++.++.....++..+.
T Consensus 306 ~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs 344 (420)
T KOG0257|consen 306 TELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFS 344 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEecc
Confidence 448899999999999999999 999998877666666654
No 147
>PRK09265 aminotransferase AlaT; Validated
Probab=99.88 E-value=3.3e-20 Score=194.82 Aligned_cols=312 Identities=14% Similarity=0.108 Sum_probs=205.7
Q ss_pred CCcccchHHHHHHHHHHHHHHHHh--CCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALL--GNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~--g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
.+|....+..++.+.+.+++.... ++++++ + ++|+|+++++.+++.++.+ +| ++|+++.++|+.
T Consensus 66 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~----i--~~t~G~~~~l~~~~~~~~~-----~g---d~Vlv~~p~y~~ 131 (404)
T PRK09265 66 QGYSDSKGLFSARKAIMQYYQQKGIPDVDVDD----I--YIGNGVSELIVMAMQALLN-----NG---DEVLVPAPDYPL 131 (404)
T ss_pred CCCCCCCCcHHHHHHHHHHHhccCCCCCCccc----E--EEeCChHHHHHHHHHHhCC-----CC---CEEEEeCCCCcC
Confidence 445444555566665555554321 455554 6 8999999999999988743 66 899999999999
Q ss_pred HHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcc
Q 009181 239 YDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~g 313 (541)
+..+++..|++++.++++. ++.+|++++++++++++++|++++|+||||.+.+ +++|.++|+++|+++++|++|+
T Consensus 132 ~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~ 211 (404)
T PRK09265 132 WTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYD 211 (404)
T ss_pred hHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhh
Confidence 9999999999999998864 5789999999999989999999999999999988 8899999999999999999998
Q ss_pred cchhhhhhhcCCCCCCCCcCCCCceE-EEeCCCCCC-CCCCCceEEEEe-cccccccccccccccCCCccCCCcccCCCC
Q 009181 314 GFVLPFAKKLGYPIPPFDFSVQGVTS-ISVDVHKYG-LAPKGTSVVLYR-NREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~~~~~~gvds-is~~~hK~~-~~p~g~g~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~ 390 (541)
.+... ... .+.+......... +..++.|.. .++..+|+++.. ++............. . ....
T Consensus 212 ~~~~~--~~~---~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~----~~~~----- 276 (404)
T PRK09265 212 KILYD--GAV---HISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-A----SMRL----- 276 (404)
T ss_pred hccCC--CCC---cCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHH-h----cccc-----
Confidence 66431 000 1111111122223 345668984 445568987764 332111000000000 0 0000
Q ss_pred CchHHHHHHHHHHHhH-HHHHHH---HHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC------CHHHHHHHH
Q 009181 391 GGLIAGAWAALMSLGQ-EGYLEN---TKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV------DIFEVNDIM 460 (541)
Q Consensus 391 ~~~~a~~~~al~~lg~-~g~~~~---~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~------~~~~l~~~l 460 (541)
+....++.++...++. +.+++. .++..+.++++.+.|++++++++..+....+++++.++. +...+.+.+
T Consensus 277 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l 356 (404)
T PRK09265 277 CANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLL 356 (404)
T ss_pred CCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccccCCCCHHHHHHHHH
Confidence 0011244444444432 222222 346667788889999888888766544455666666431 234577788
Q ss_pred HhCCceecc---C--CCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 461 SSKGWHLNP---L--QRPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 461 ~~~G~~~~~---~--~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
.++|+.+.. + ..++++|+++. .+.+++++.+++|+++++..
T Consensus 357 ~~~gv~v~pg~~F~~~~~~~~Ri~~~-~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 357 LQEKVLLVQGTGFNWPEPDHFRIVTL-PRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred HhCCEEEECchhhCCCCCCeEEEEeC-CCHHHHHHHHHHHHHHHHHh
Confidence 889976533 2 13579999995 45699999999999988654
No 148
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1.5e-20 Score=195.06 Aligned_cols=294 Identities=17% Similarity=0.150 Sum_probs=212.5
Q ss_pred hHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHh
Q 009181 167 QSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQ 244 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~ 244 (541)
++...+.+.+.+++.+.+|. ++++ + ++|+|+++++.+++.++.+ +| ++|+++.++|+.+..+++
T Consensus 65 ~g~~~lr~aia~~~~~~~~~~~~~~~----I--~it~G~~~~l~~~~~~~~~-----~g---d~v~v~~P~y~~~~~~~~ 130 (368)
T PRK03317 65 RDAVALRADLAAYLTAQTGVGLTVEN----V--WAANGSNEILQQLLQAFGG-----PG---RTALGFVPSYSMHPIIAR 130 (368)
T ss_pred CchHHHHHHHHHHhhhhccCCCChhh----E--EECCCHHHHHHHHHHHhcC-----CC---CEEEEeCCChHHHHHHHH
Confidence 45567777777777777665 4444 6 8999999999999998864 66 899999999999999999
Q ss_pred hcCCeEEEeeCCCCCccCHHHHHHhhcc-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhc
Q 009181 245 YFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (541)
Q Consensus 245 ~~G~~v~~v~~~~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~ 323 (541)
..|++++.++.++++.+|++++++++++ +++++++++|+||||.+.+.+++.++++.+++++++|++|+.|...
T Consensus 131 ~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~----- 205 (368)
T PRK03317 131 GTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRS----- 205 (368)
T ss_pred hcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhccc-----
Confidence 9999999998877889999999999974 6888899999999999999999999999999999999999876421
Q ss_pred CCCCCCCCc-CCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHH
Q 009181 324 GYPIPPFDF-SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAAL 401 (541)
Q Consensus 324 g~~~p~~~~-~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al 401 (541)
|. .+.... ....-.++..++.|... ++..+|+++. ++++..........|. .+ ..++.++.
T Consensus 206 ~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~-~~~~~~~l~~~~~~~~----------~s-----~~~~~a~~ 268 (368)
T PRK03317 206 GT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAA-APAVVDALRLVRLPYH----------LS-----AVTQAAAR 268 (368)
T ss_pred CC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhC-CHHHHHHHHhcCCCCC----------CC-----HHHHHHHH
Confidence 10 001111 01112355668889842 3455787665 4444433211111121 11 12344444
Q ss_pred HHHh-HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEe
Q 009181 402 MSLG-QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICV 480 (541)
Q Consensus 402 ~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~ 480 (541)
..+. .+.+.+..+++.+.++++.+.|++. ++++. ++..+++.|... .+..++.+.|.++|+.+...+.++++|+++
T Consensus 269 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~-~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~ 345 (368)
T PRK03317 269 AALRHADELLASVAALRAERDRVVAWLREL-GLRVA-PSDANFVLFGRF-ADRHAVWQGLLDRGVLIRDVGIPGWLRVTI 345 (368)
T ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeC-CCCCcEEEEecc-CCHHHHHHHHHHCCEEEEeCCCCCeEEEec
Confidence 3342 2445566677788888899999886 77755 455566555321 256789999999998887777778999998
Q ss_pred cCCCHHHHHHHHHHHHHHHHH
Q 009181 481 TLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 481 ~~~~~e~id~~i~~L~~~~~~ 501 (541)
+ +.++++++++.|+++++.
T Consensus 346 ~--~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 346 G--TPEENDAFLAALAEVLAT 364 (368)
T ss_pred C--CHHHHHHHHHHHHHHHHH
Confidence 7 458899999999988753
No 149
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=1.1e-20 Score=195.45 Aligned_cols=284 Identities=16% Similarity=0.134 Sum_probs=206.1
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++.+|+++++ + ++|+|+++++..++.++.+ +| ++|+++.++|+.+...++..|++++.||
T Consensus 68 ~Lr~aia~~~~~~~~~----I--~vt~Gs~e~i~~~~~~l~~-----~g---d~vlv~~P~y~~~~~~~~~~g~~v~~v~ 133 (366)
T PRK01533 68 TLRQTIANKLHVKMEQ----V--LCGSGLDEVIQIISRAVLK-----AG---DNIVTAGATFPQYRHHAIIEGCEVKEVA 133 (366)
T ss_pred HHHHHHHHHhCCCcce----E--EECCCHHHHHHHHHHHhcC-----CC---CEEEEcCCcHHHHHHHHHHcCCEEEEee
Confidence 3666778888998776 6 8999999999999998753 66 8999999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHH---HcCCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 255 VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELAL---SHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~---~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
.+ ++.+|+++|+++++++++++++++|+||||.+.+.+++.++++ +++ ++++|++|..|... . .. .+...
T Consensus 134 ~~-~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~--~--~~-~~~~~ 206 (366)
T PRK01533 134 LN-NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTA--K--DF-PETLP 206 (366)
T ss_pred cC-CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcc--c--cC-cchhH
Confidence 96 4569999999999989999999999999999988766655554 444 67889999755421 0 00 00111
Q ss_pred c-CCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhH-HH
Q 009181 332 F-SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ-EG 408 (541)
Q Consensus 332 ~-~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~-~g 408 (541)
. ...+-.++..++.|... ++..+|+++. ++++..........|. ....++.++...+.. +.
T Consensus 207 ~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~-~~~~~~~l~~~~~~~~---------------~~~~~q~aa~~~l~~~~~ 270 (366)
T PRK01533 207 LLEKHKNILVLRTFSKAYGLASFRVGYAVG-HEELIEKLNVVRLPFN---------------VSSLAQKAATIAFGDDEF 270 (366)
T ss_pred HhccCCCEEEEeCchHHhcChHHHHhHHhC-CHHHHHHHHHhcCCCC---------------cCHHHHHHHHHHhCCHHH
Confidence 1 11122466778899842 4555897654 4544432211111121 113366666666643 34
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHH
Q 009181 409 YLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVV 488 (541)
Q Consensus 409 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~i 488 (541)
.++..+...+.++++.+.++++ ++++. +++.+++++... +..++.+.|.++|+.+..+ ++++||+++. .++.
T Consensus 271 ~~~~~~~~~~~r~~~~~~l~~~-g~~~~-~~~~nf~~~~~~--~~~~~~~~l~~~GI~Vr~~--~~~iRis~~~--~~~~ 342 (366)
T PRK01533 271 IEEIVRVNTEGLRQYESFCKEN-EIPFY-QSQTNFIFLPVE--NGGEIYEACAHAGFIIRPF--PNGVRITVGT--REQN 342 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCccC-CCcCcEEEEeCC--CHHHHHHHHHHCCcEEccC--CCceEEeCCC--HHHH
Confidence 5566677777888888888877 77755 567888888874 4678999999999988764 6789999873 5899
Q ss_pred HHHHHHHHHHHHHHH
Q 009181 489 DVFLRDLRESVETVK 503 (541)
Q Consensus 489 d~~i~~L~~~~~~l~ 503 (541)
++|+++|+++++..+
T Consensus 343 ~~l~~al~~~~~~~~ 357 (366)
T PRK01533 343 EGVISVLQQHFENKK 357 (366)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999998865433
No 150
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.88 E-value=5.4e-20 Score=193.11 Aligned_cols=309 Identities=13% Similarity=0.135 Sum_probs=214.2
Q ss_pred CCCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc
Q 009181 160 PLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (541)
Q Consensus 160 ~~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~ 237 (541)
...|....+...+.+.+.+++.+.+|.+ +++ ++ ++|+|+++++.+++.++.+ +| +.|++++++|+
T Consensus 64 ~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~---~I--~it~G~~~al~~~~~~l~~-----~g---d~Vlv~~P~y~ 130 (403)
T PRK08636 64 THGYSVSKGIYKLRLAICNWYKRKYNVDLDPET---EV--VATMGSKEGYVHLVQAITN-----PG---DVAIVPDPAYP 130 (403)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---eE--EECCChHHHHHHHHHHhCC-----CC---CEEEEcCCCCc
Confidence 3455556777888888999998888854 331 26 8999999999999998764 67 99999999999
Q ss_pred hHHHHHhhcCCeEEEeeCC--CCCccCHHHH----HHhhc---cCceEEEeecCCCCCccccC---HHHHHHHHHHcCCE
Q 009181 238 AYDKAAQYFNIKLWRVPVD--KEFRADVKAI----KKYIN---RNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTC 305 (541)
Q Consensus 238 s~~ka~~~~G~~v~~v~~~--~~~~~d~~~L----e~~i~---~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~ 305 (541)
.+...++..|++++.||++ +++.+|++++ +++++ .+++++++++|+||||.+.+ +++|.++|++|+++
T Consensus 131 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~ 210 (403)
T PRK08636 131 IHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFY 210 (403)
T ss_pred chHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcE
Confidence 9999999999999999985 3578998754 55554 46899999999999999977 57889999999999
Q ss_pred EEEeCCcccchhhhhhhcCCCCCCCC-c-CCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCC
Q 009181 306 LHVDLCLGGFVLPFAKKLGYPIPPFD-F-SVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVS 382 (541)
Q Consensus 306 lhvD~a~gg~~~~f~~~~g~~~p~~~-~-~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~ 382 (541)
+++|++|+.+.. + +...+++. . ......+.+.++.|.. .++..+|+++. ++++...... ...+... ..
T Consensus 211 II~De~Y~~l~~---~--~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~-~~~li~~~~~-~~~~~~~--~~ 281 (403)
T PRK08636 211 IISDIAYADITF---D--GYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVG-NKKLVGALKK-IKSWLDY--GM 281 (403)
T ss_pred EEEeccchhhcc---C--CCCCCChhcCCCccccEEEEEecccccCCccceeeeeeC-CHHHHHHHHH-HHHHhcc--cC
Confidence 999999987643 1 11111111 1 1123445567889995 46667998654 4444432111 1111000 00
Q ss_pred CcccCCCCCchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC----CHHHH
Q 009181 383 PTVAGSRPGGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV----DIFEV 456 (541)
Q Consensus 383 ~~~~gsr~~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~----~~~~l 456 (541)
+. ..+.++...+ ....+++..+.+.++++.+.+.|++. ++.+..+..+..++++.++. +..++
T Consensus 282 -----~~-----~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~l 350 (403)
T PRK08636 282 -----FT-----PIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANA-GWELQKPRASMFVWAKIPEPARHLGSLEF 350 (403)
T ss_pred -----Ch-----HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCcceEEEEECCCccCCCCHHHH
Confidence 00 0122222222 24556677778888889999999886 67766555667777877642 45778
Q ss_pred HHHHH-hCCceecc---CC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 457 NDIMS-SKGWHLNP---LQ--RPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 457 ~~~l~-~~G~~~~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
.+.+. +.|+.+.. ++ .++++||++. ...+++++.+++|+++++..
T Consensus 351 ~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 351 SKQLLTEAKVAVSPGIGFGEYGDEYVRIALI-ENENRIRQAARNIKKFLKEL 401 (403)
T ss_pred HHHHHHhCCEEEecchhhCcCCCCeEEEEec-CCHHHHHHHHHHHHHHHHhh
Confidence 77654 67876543 22 2479999998 45689999999999888653
No 151
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.88 E-value=4.8e-21 Score=197.13 Aligned_cols=301 Identities=12% Similarity=0.014 Sum_probs=214.6
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch--HHHHH
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YDKAA 243 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s--~~ka~ 243 (541)
.+...++-+++++.+++++|.+.+. ++ -+++++||.++..++..+.. +| +++++....-++ +.+.+
T Consensus 43 ~~~f~~~~~~~~~~l~~l~~~~~~~---~v-~~~~gsgt~~~Ea~~~nl~~-----~g---~~~l~i~~G~fg~r~~~~a 110 (360)
T PRK05355 43 SKEFEAVAEEAEADLRELLNIPDNY---KV-LFLQGGASLQFAMVPMNLLG-----GG---KKADYVDTGSWSKKAIKEA 110 (360)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCc---EE-EEEcCCchHHHHHHHHhcCC-----CC---CeEEEEECCHHHHHHHHHH
Confidence 4556678888999999999985432 13 24456678888888777653 44 445444444333 46778
Q ss_pred hhcCCeEEEeeCCC-CCccCHHHHHH-hhccCceEEEeecCCCCCcccc-CHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 244 QYFNIKLWRVPVDK-EFRADVKAIKK-YINRNTVLIVGSAPGFPHGIID-PIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 244 ~~~G~~v~~v~~~~-~~~~d~~~Le~-~i~~~t~~vv~~~~~~~~G~id-~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
+.+|.. ..++.++ .+..+..++++ ++++++.+|.+++..|.||+.. |+++| ||++++||++++.+..
T Consensus 111 ~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~--- 180 (360)
T PRK05355 111 KKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSR--- 180 (360)
T ss_pred HHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCc---
Confidence 888865 6666664 56666666666 8888999999999999999997 77777 8999999999765544
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEeccccccccc--ccccccCCCccCCCcccCCCCCchHHHHH
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQF--VAVTEWSGGLYVSPTVAGSRPGGLIAGAW 398 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~gsr~~~~~a~~~ 398 (541)
++|... .|++.+++||+ ++|+|.|+++++++.+.+..- ....+|... .......|+.+-..+.++.
T Consensus 181 --------~idv~~--~d~~~~ssqK~-lgP~Glg~l~~s~~~l~~~~~~~~~~~~~~~~-~~~~~~~~Tp~~~~i~aL~ 248 (360)
T PRK05355 181 --------PIDVSK--FGLIYAGAQKN-IGPAGLTIVIVREDLLGRALPSIPSMLDYKTH-ADNDSMYNTPPTFAIYLAG 248 (360)
T ss_pred --------cCCHHH--ccEEEEecccc-ccCCceEEEEECHHHHhhcccCCChHHHHHHH-HhcCCccCCCcHHHHHHHH
Confidence 344443 46999999998 689999998887765432111 001111100 0111234666667789999
Q ss_pred HHHHHHhHH-HHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC---CeeEEEEecCCC-CHHHHHHHHHhCCceeccCC-C
Q 009181 399 AALMSLGQE-GYLENTKAIMEVSESIQKGIKEIPELFIIGRP---DMTIVAFGSDVV-DIFEVNDIMSSKGWHLNPLQ-R 472 (541)
Q Consensus 399 ~al~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~---~~~~v~f~~~~~-~~~~l~~~l~~~G~~~~~~~-~ 472 (541)
++++++..+ |++++.++...+++++++.|++++.+..+.++ ...+++|..++. ...++.+.+.++|+++.... .
T Consensus 249 ~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~ 328 (360)
T PRK05355 249 LVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHRS 328 (360)
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCCc
Confidence 999999888 89999999999999999999998633333222 236789987764 33566678888998873332 2
Q ss_pred CCeEEEEecCCCH-HHHHHHHHHHHHHHH
Q 009181 473 PNSIHICVTLQHV-AVVDVFLRDLRESVE 500 (541)
Q Consensus 473 ~~~iRi~~~~~~~-e~id~~i~~L~~~~~ 500 (541)
.+.+|+|+..+++ +|||+|++.|+++++
T Consensus 329 ~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 329 VGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred cCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 4789999998888 999999999999764
No 152
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.88 E-value=4.5e-20 Score=195.12 Aligned_cols=309 Identities=13% Similarity=0.179 Sum_probs=211.3
Q ss_pred cchHHHHHHHHHHHHHHHHhC----CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH
Q 009181 165 IFQSVARFEAEVIAMTAALLG----NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g----~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ 240 (541)
.+.|...+.+.+.+++.+.+| +++++ + ++|+|+++++.+++.++.+ +| +.|+++.+.|+.+.
T Consensus 93 ~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~----I--vit~G~t~al~~l~~~l~~-----pG---D~Vlv~~P~Y~~f~ 158 (447)
T PLN02607 93 DYHGLKSFRQAMASFMEQIRGGKARFDPDR----I--VLTAGATAANELLTFILAD-----PG---DALLVPTPYYPGFD 158 (447)
T ss_pred CCcchHHHHHHHHHHHHHhcCCCCCcCHHH----e--EEcCChHHHHHHHHHHhCC-----CC---CEEEEcCCCCcchH
Confidence 345777888888888888776 34443 7 8999999999998887764 67 89999999999998
Q ss_pred HHHh-hcCCeEEEeeCCC--CCccCHHHHHHhhcc------CceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEE
Q 009181 241 KAAQ-YFNIKLWRVPVDK--EFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHV 308 (541)
Q Consensus 241 ka~~-~~G~~v~~v~~~~--~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhv 308 (541)
..+. ..|++++.|++++ ++.+|++++++++++ +++++++++|+||+|.+.+ +++|.++|++|++++++
T Consensus 159 ~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~ 238 (447)
T PLN02607 159 RDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVS 238 (447)
T ss_pred HHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEE
Confidence 8777 5799999999874 567999999999874 6889999999999999987 77899999999999999
Q ss_pred eCCcccchhh---hhhhcCCCCCCCCc-CCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCC
Q 009181 309 DLCLGGFVLP---FAKKLGYPIPPFDF-SVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSP 383 (541)
Q Consensus 309 D~a~gg~~~~---f~~~~g~~~p~~~~-~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (541)
|++|+.+.+. |..-... ++..+. ....-..+..++.|.+ ..+..+|+++..++.+...... ...|..
T Consensus 239 DEiYa~~~f~~~~f~S~~s~-~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~-~~~~~~------ 310 (447)
T PLN02607 239 DEIYSGSVFSASEFVSVAEI-VEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-MSSFTL------ 310 (447)
T ss_pred eccccccccCCCCcccHHHH-HhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHH-HhhcCC------
Confidence 9999875431 1000000 000000 0012234556888974 3556689877655554332110 011100
Q ss_pred cccCCCCCchHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-------
Q 009181 384 TVAGSRPGGLIAGAWAALMSLGQ-----EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV------- 451 (541)
Q Consensus 384 ~~~gsr~~~~~a~~~~al~~lg~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~------- 451 (541)
.. ..++.++...+.. ..+.+..+++.+..+.+.+.|++. ++.+..+..+.+++++++..
T Consensus 311 ------~s--~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~fvw~~L~~~~~~~~~~ 381 (447)
T PLN02607 311 ------VS--SQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGNAGLFCWMNLSPLLETPTRE 381 (447)
T ss_pred ------CC--HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCCeeEEEEEEchHhhcCCCch
Confidence 00 1134444343432 223455666777888899999886 77766544456677776431
Q ss_pred CHHHHHHHHHh-CCceecc---C--CCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHc
Q 009181 452 DIFEVNDIMSS-KGWHLNP---L--QRPNSIHICVTLQHVAVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 452 ~~~~l~~~l~~-~G~~~~~---~--~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~~ 504 (541)
...++.+++.+ .|+.+.. + ..++++|+|++....+++++.+++|.+++++-+.
T Consensus 382 ~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~ 440 (447)
T PLN02607 382 GELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDRRKT 440 (447)
T ss_pred hHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHh
Confidence 12356666665 6876643 2 2368999999976679999999999999876553
No 153
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.88 E-value=2e-20 Score=194.84 Aligned_cols=274 Identities=23% Similarity=0.219 Sum_probs=192.1
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH----HHHhhcCCeE
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD----KAAQYFNIKL 250 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~----ka~~~~G~~v 250 (541)
++++.+++++|.+. + ++|+||++|+..++.++.. +| ++|+++...|.+.. ..+..+|+++
T Consensus 65 ~le~~la~l~g~~~------~--v~~ssG~~Ai~~al~al~~-----~G---d~Vi~~~~~y~~t~~~~~~~~~~~G~~v 128 (390)
T PRK08133 65 MFQERLAALEGAEA------C--VATASGMAAILAVVMALLQ-----AG---DHVVSSRSLFGSTVSLFEKIFARFGIET 128 (390)
T ss_pred HHHHHHHHHhCCCc------E--EEECCHHHHHHHHHHHHhC-----CC---CEEEEccCcchhHHHHHHHHHHHcCcEE
Confidence 35558899998753 3 7899999999999988743 66 89999999887643 4566789999
Q ss_pred EEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCC
Q 009181 251 WRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (541)
Q Consensus 251 ~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~ 330 (541)
+.++++ |+++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++++.+... . +
T Consensus 129 ~~vd~~-----d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~--------~-p- 193 (390)
T PRK08133 129 TFVDLT-----DLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQ--------Q-P- 193 (390)
T ss_pred EEECCC-----CHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccC--------C-c-
Confidence 999875 899999999999999999999999999999999999999999999999998644320 1 1
Q ss_pred CcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHH
Q 009181 331 DFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEG 408 (541)
Q Consensus 331 ~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g 408 (541)
...|+|+++.++||+ +++.| .|.+++.+++.......... ..|.... ...+|.+++ |.+.
T Consensus 194 --l~~g~Divv~S~sK~-~~g~g~~~GG~vv~~~~~~~~~~~~~~-----------~~g~~~~--~~~a~~~l~--gl~t 255 (390)
T PRK08133 194 --LKLGADVVIHSATKY-LDGQGRVLGGAVVGSKELMEEVFGFLR-----------TAGPTLS--PFNAWVFLK--GLET 255 (390)
T ss_pred --hhhCCcEEEeeccee-ecCCcceEeEEEEcCHHHHHHHHHHHH-----------HhCCCCC--HHHHHHHHc--ccch
Confidence 234779999999999 45554 43344444443221110000 0111111 225666653 5567
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC-----------------eeEEEEecCCC--CHHHHHHHHHh--CCcee
Q 009181 409 YLENTKAIMEVSESIQKGIKEIPELFIIGRPD-----------------MTIVAFGSDVV--DIFEVNDIMSS--KGWHL 467 (541)
Q Consensus 409 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----------------~~~v~f~~~~~--~~~~l~~~l~~--~G~~~ 467 (541)
+..+.++..+++..+.+.|++.|+++-+..|. .++++|.+++. ...++.+.|.- .+..+
T Consensus 256 l~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~sl 335 (390)
T PRK08133 256 LSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATRLISITANL 335 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhCCcceEeccC
Confidence 88888899999999999999998876543322 46899998642 12333333321 11100
Q ss_pred ---------c--------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 468 ---------N--------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 468 ---------~--------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
+ ..+. ++.+|+|++. |+.|.++++|+++++
T Consensus 336 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~ 389 (390)
T PRK08133 336 GDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGL---EDVADIKADLARGLA 389 (390)
T ss_pred CCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHhh
Confidence 0 0111 2579999998 678889999998874
No 154
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=3e-20 Score=193.82 Aligned_cols=277 Identities=16% Similarity=0.138 Sum_probs=195.9
Q ss_pred HHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HHHHHhhcCCeEE
Q 009181 176 VIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDKAAQYFNIKLW 251 (541)
Q Consensus 176 v~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~ka~~~~G~~v~ 251 (541)
+++.++++.|.+. . +++++|++|+.+++.++.. +| ++|+++.+.|.. +...++..|++++
T Consensus 65 Le~~lA~l~g~~~-~-------v~~~sG~~Ai~~~l~all~-----pG---D~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~ 128 (405)
T PRK08776 65 LGEALAELEGGAG-G-------VITATGMGAINLVLNALLQ-----PG---DTLVVPHDAYGGSWRLFNALAKKGHFALI 128 (405)
T ss_pred HHHHHHHHhCCCc-e-------EEEcCHHHHHHHHHHHHhC-----CC---CEEEEccCCchHHHHHHHHHHHhcCcEEE
Confidence 4458888888742 2 6777789999998888743 67 899999999887 4455566788888
Q ss_pred EeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 252 RVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
.++.. |+++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.... ..++
T Consensus 129 ~v~~~-----d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~---------~~pl- 193 (405)
T PRK08776 129 TADLT-----DPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL---------QKPL- 193 (405)
T ss_pred EECCC-----CHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc---------CCcc-
Confidence 88753 89999999999999999999999999999999999999999999999999864321 1123
Q ss_pred cCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHH
Q 009181 332 FSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGY 409 (541)
Q Consensus 332 ~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~ 409 (541)
..|+|++..++||+++++.+ .|+++.+++++.+..... .... |... ....+|+.+ .|.+.+
T Consensus 194 --~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~-~~~~----------g~~~--s~~~a~l~~--~gl~tl 256 (405)
T PRK08776 194 --EFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWW-ANAL----------GLTG--SPFDAFLTL--RGLRTL 256 (405)
T ss_pred --cccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHH-HHhc----------CCCC--CHHHHHHHH--hhhCcH
Confidence 35889999999999766655 576666666554322110 1000 1111 133677666 466788
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCC--CHHHHHHHHHh--CCce--
Q 009181 410 LENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVV--DIFEVNDIMSS--KGWH-- 466 (541)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~--~~~~l~~~l~~--~G~~-- 466 (541)
..+.++..+++..+.+.|++.|.+.-+.-| .+++++|.+++. ...++.+.|.- .+..
T Consensus 257 ~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~s~G 336 (405)
T PRK08776 257 DARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRYFTLAESLG 336 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCCcceEccCCC
Confidence 999999999999999999999887643222 146899998642 12334443332 1100
Q ss_pred ------e-c--------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 467 ------L-N--------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 467 ------~-~--------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
. . ..+. ++.+|+|++. |++|.++++|+++++.+.
T Consensus 337 ~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~al~~~~ 392 (405)
T PRK08776 337 GVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGI---ESAEDLLIDLRAGLARAE 392 (405)
T ss_pred CCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHhH
Confidence 0 0 0111 2579999998 667788888888877654
No 155
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.88 E-value=1.5e-20 Score=193.79 Aligned_cols=283 Identities=16% Similarity=0.193 Sum_probs=205.1
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++.++.++++ + ++|+|+++++..++.++. + ++|+++.+.++.+..+++..|++++.+|
T Consensus 58 ~lr~~ia~~~~~~~~~----i--~it~Ga~~~l~~~~~~~~------~----~~v~i~~P~y~~~~~~~~~~g~~~~~~~ 121 (354)
T PRK06358 58 ELRKRIASFEQLDLEN----V--ILGNGATELIFNIVKVTK------P----KKVLILAPTFAEYERALKAFDAEIEYAE 121 (354)
T ss_pred HHHHHHHHHhCCChhh----E--EECCCHHHHHHHHHHHhC------C----CcEEEecCChHHHHHHHHHcCCeeEEEe
Confidence 4666788888888776 7 899999999999888751 1 4799999999999999999999999999
Q ss_pred CCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCC
Q 009181 255 VDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP 329 (541)
Q Consensus 255 ~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~ 329 (541)
+++ ++.+| +++.+.+.++++++++++|+||||.+.+ +++|.++|++|++++++|++|..+... ... .+.
T Consensus 122 ~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~---~~~--~~~ 195 (354)
T PRK06358 122 LTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEE---NET--ISM 195 (354)
T ss_pred CccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCC---ccc--hhH
Confidence 974 46789 6666677778999999999999999987 778888999999999999999876531 000 111
Q ss_pred CCc-CCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHH
Q 009181 330 FDF-SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQE 407 (541)
Q Consensus 330 ~~~-~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~ 407 (541)
+.. ....-.++..++.|... ++..+|+++..++.+..........|. ....+++++...+...
T Consensus 196 ~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~~~---------------~~~~~q~~~~~~l~~~ 260 (354)
T PRK06358 196 INYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPWS---------------INTFADLAGQTLLDDK 260 (354)
T ss_pred HHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCCc---------------chHHHHHHHHHHhccH
Confidence 111 11122456678889953 566799877655544332211111121 1133556665556433
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceecc---CC--CCCeEEEEec
Q 009181 408 -GYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP---LQ--RPNSIHICVT 481 (541)
Q Consensus 408 -g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~---~~--~~~~iRi~~~ 481 (541)
.+++..+...+.++++.+.|++.+++.+. +|..++++++.++ ..++.+.|.++|+.+.. ++ .++++|++++
T Consensus 261 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~~--~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~ 337 (354)
T PRK06358 261 EYIKKTIQWIKEEKDFLYNGLSEFKGIKVY-KPSVNFIFFKLEK--PIDLRKELLKKGILIRSCSNYRGLDENYYRVAVK 337 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCcceEEEEEcCc--hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC
Confidence 34777888888899999999988887765 4567778887753 47899999999976543 22 2368999988
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 009181 482 LQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 482 ~~~~e~id~~i~~L~~~~ 499 (541)
. .++.+++++.|++++
T Consensus 338 ~--~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 338 S--REDNKKLLKALEVIL 353 (354)
T ss_pred C--HHHHHHHHHHHHHHh
Confidence 3 689999999998765
No 156
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=2e-20 Score=193.58 Aligned_cols=284 Identities=16% Similarity=0.115 Sum_probs=199.4
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH---
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA--- 242 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka--- 242 (541)
.|....+|+ .++++.|.+ . + ++|+||++|+..++.++.. +| ++|+++.+.|.+....
T Consensus 52 npt~~~Le~----~lA~leg~e--~----i--vvt~gg~~Ai~~~l~all~-----~G---d~Il~~~~~y~~~~~~~~~ 111 (388)
T PRK08861 52 NPNRGLLEQ----TLSELESGK--G----A--VVTNCGTSALNLWVSALLG-----PD---DLIVAPHDCYGGTYRLFNT 111 (388)
T ss_pred CchHHHHHH----HHHHHhCCC--e----E--EEECCHHHHHHHHHHHHcC-----CC---CEEEEcCCchHHHHHHHHH
Confidence 355555555 888888853 2 4 8999999999999988753 66 8999999998864432
Q ss_pred -HhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 243 -AQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 243 -~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
....|+++..++. .|+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.++..
T Consensus 112 ~~~~~gi~v~~vd~-----~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~--- 183 (388)
T PRK08861 112 RANKGDFKVQFVDQ-----SDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQ--- 183 (388)
T ss_pred HHhcCCeEEEEECC-----CCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccC---
Confidence 3344778888763 4899999999999999999999999999999999999999999999999999754331
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHH
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
. ++ ..|+|++..++|||+.|+.+ .|+++.+++++..... ...... |.-.+ ...+|.
T Consensus 184 -----~-pl---~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~-~~~~~~----------G~~~~--p~~a~l 241 (388)
T PRK08861 184 -----K-PL---ELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELA-WWGNCI----------GATGT--PFDSYM 241 (388)
T ss_pred -----C-Cc---ccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHH-HHHhcc----------CCCCC--hHHHHH
Confidence 1 23 34899999999999877765 5666665554332211 111111 11111 236776
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCC--CHHHHHHHH
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVV--DIFEVNDIM 460 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~--~~~~l~~~l 460 (541)
.+ .|.+.+.-+.++..+++..+++.|++.|.++-+.-| ..++++|.+++. ...++.+.|
T Consensus 242 ~~--rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l 319 (388)
T PRK08861 242 TL--RGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKAL 319 (388)
T ss_pred HH--hcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcC
Confidence 66 466777888999999999999999999887543222 146899998641 123333333
Q ss_pred Hh--CCcee---------c--------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHc
Q 009181 461 SS--KGWHL---------N--------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 461 ~~--~G~~~---------~--------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~~ 504 (541)
.- .+..+ + ..+. ++.+|+|++. |++|.++++|+++++.+.+
T Consensus 320 ~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---E~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 320 ALFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGL---EDAQDLIADLDQAFAKAAE 386 (388)
T ss_pred CcceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHHHh
Confidence 21 11100 0 0111 2579999998 7788889999999887653
No 157
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1.3e-20 Score=195.55 Aligned_cols=286 Identities=16% Similarity=0.151 Sum_probs=206.9
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++++|+++++ + ++|+|+++++..++.++.+ +| ++|+++.+.|+.+...++..|++++.++
T Consensus 75 ~lr~~ia~~~~~~~~~----i--~~t~G~~~~l~~~~~~~~~-----~g---d~vli~~P~y~~~~~~~~~~g~~~~~v~ 140 (371)
T PRK05166 75 ALREAIAARTGVPADR----I--ILGNGSEDLIAVICRAVLR-----PG---DRVVTLYPSFPLHEDYPTMMGARVERVT 140 (371)
T ss_pred HHHHHHHHHhCcCHHH----E--EEcCCHHHHHHHHHHHhcC-----CC---CEEEEcCCChHHHHHHHHHcCCeEEEee
Confidence 4666888889987765 6 8999999999988887742 66 8999999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHH--cCCEEEEeCCcccchhhhhhhcCCCCCCCCc
Q 009181 255 VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALS--HGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~--~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~ 332 (541)
+++++.+|+++++++++++++++++++|+||||.+.|.+++.++++. .++++++|++|+.+.. .. .. .+.+..
T Consensus 141 ~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~---~~-~~-~~~~~~ 215 (371)
T PRK05166 141 VTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAA---GD-DY-PSALTL 215 (371)
T ss_pred cCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcC---Cc-Cc-ccHHHH
Confidence 98888999999999999999999999999999999998777777664 4799999999976542 10 00 000111
Q ss_pred -CCCC-ceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHH-hHHH
Q 009181 333 -SVQG-VTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL-GQEG 408 (541)
Q Consensus 333 -~~~g-vdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l-g~~g 408 (541)
...+ -.++..++.|... ++..+|+++..++++..........|. ....++.+++..+ ..+.
T Consensus 216 ~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~~~---------------~~~~~q~~~~~~l~~~~~ 280 (371)
T PRK05166 216 LKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTPFN---------------VNGAAQAAALAALDDEEH 280 (371)
T ss_pred HhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhccCCC---------------CCHHHHHHHHHHhcCHHH
Confidence 1111 2356678889843 555689877766655433221111111 0122344444333 2355
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccC---CCCCeEEEEecCCCH
Q 009181 409 YLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPL---QRPNSIHICVTLQHV 485 (541)
Q Consensus 409 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~---~~~~~iRi~~~~~~~ 485 (541)
+++..+...+.++++.+.|++. ++++ .++...+++++.. .+..++.+.|.++|+.+... +.++++|++++. .
T Consensus 281 ~~~~~~~~~~~r~~l~~~L~~~-g~~~-~p~~g~fl~~~~~-~~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~~--~ 355 (371)
T PRK05166 281 LAKGVALALAERERLKKELAEM-GYRI-APSRANFLFFDAR-RPASAVAEALLRQGVIVKPWKQPGFETFIRVSIGS--P 355 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-cCee-CCCcCCEEEEeCC-CCHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcCC--H
Confidence 7777788888889999999987 7765 4556677777753 35678999999999766442 335799999984 5
Q ss_pred HHHHHHHHHHHHHH
Q 009181 486 AVVDVFLRDLRESV 499 (541)
Q Consensus 486 e~id~~i~~L~~~~ 499 (541)
++.+++++.|++++
T Consensus 356 ~~~~~l~~~l~~i~ 369 (371)
T PRK05166 356 EENDHFVAALDKVL 369 (371)
T ss_pred HHHHHHHHHHHHHh
Confidence 67888888887764
No 158
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=1.8e-20 Score=195.15 Aligned_cols=285 Identities=16% Similarity=0.187 Sum_probs=195.4
Q ss_pred cchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH----H
Q 009181 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY----D 240 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~----~ 240 (541)
..|...++|+ .++++.|.+. . +++++|+.|+..++. +. ++| ++|+++.+.|++. .
T Consensus 52 ~~p~~~~le~----~lA~l~g~~~-~-------v~~~sG~~ai~~~l~-~l-----~~G---d~Vlv~~~~y~~~~~~~~ 110 (390)
T PRK08064 52 GNPTREALED----IIAELEGGTK-G-------FAFASGMAAISTAFL-LL-----SKG---DHVLISEDVYGGTYRMIT 110 (390)
T ss_pred CChhHHHHHH----HHHHHhCCCC-e-------EEECCHHHHHHHHHH-Hh-----CCC---CEEEEccCccchHHHHHH
Confidence 3455555555 8999999873 2 455666778877775 22 256 8999999988753 3
Q ss_pred HHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
..++.+|++++.++.+ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+...
T Consensus 111 ~~~~~~G~~v~~v~~~-----d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~-- 183 (390)
T PRK08064 111 EVLSRFGIEHTFVDMT-----NLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQ-- 183 (390)
T ss_pred HHHHHcCCEEEEECCC-----CHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCccccc--
Confidence 5566789999999874 789999999999999999999999999999999999999999999999998755431
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHH
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAW 398 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~ 398 (541)
. +. ..|+|++..++||++.++.+ .|+++++++++..........|... . ....+|
T Consensus 184 ------~-~~---~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~-----------~--~~~~a~ 240 (390)
T PRK08064 184 ------K-PL---DLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAV-----------L--GVQDCW 240 (390)
T ss_pred ------C-ch---hhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCC-----------C--CHHHHH
Confidence 1 12 34789999999999777776 4777766655443322221212110 0 022455
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeE-EecC----------------CCeeEEEEecCCCCHHHHHHHHH
Q 009181 399 AALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELF-IIGR----------------PDMTIVAFGSDVVDIFEVNDIMS 461 (541)
Q Consensus 399 ~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-v~~~----------------~~~~~v~f~~~~~~~~~l~~~l~ 461 (541)
..+ .|...+..+.++..+++..+.+.|++.|.+. +..+ ...++++|.+.+ ..++...+.
T Consensus 241 l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~--~~~~~~f~~ 316 (390)
T PRK08064 241 LVL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS--EEAVRQFVS 316 (390)
T ss_pred HHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC--HHHHHHHHH
Confidence 544 4555567888888888889999998876653 2211 125689999864 334444444
Q ss_pred hCCce-----ec-----------------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC
Q 009181 462 SKGWH-----LN-----------------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVETVKQNPG 507 (541)
Q Consensus 462 ~~G~~-----~~-----------------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~~~~~ 507 (541)
+.++. +. ..+. ++.+|+|++.. +.+.++++|+++++++++.|+
T Consensus 317 ~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle---~~~dli~dl~~Al~~~~~~~~ 388 (390)
T PRK08064 317 HVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLE---NVDDLIADFEQALSYVEEPVN 388 (390)
T ss_pred hCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccC---CHHHHHHHHHHHHHhcccCCC
Confidence 33321 00 0112 36899999984 466677777777777665544
No 159
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.88 E-value=4.3e-20 Score=193.31 Aligned_cols=317 Identities=15% Similarity=0.129 Sum_probs=214.7
Q ss_pred HHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCC----CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhh
Q 009181 146 SLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNK----EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNK 221 (541)
Q Consensus 146 ~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~----~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~ 221 (541)
..+.+++..... ....|....+..++.+.+.+++.+.+|.+ +++ ++ ++|+|+++++.+++.++.+
T Consensus 44 ~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~---~i--~it~Ga~~al~~~~~~l~~----- 112 (393)
T TIGR03538 44 AFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPER---HV--LPVNGTREALFAFAQAVIN----- 112 (393)
T ss_pred HHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCc---eE--EECCCcHHHHHHHHHHHcC-----
Confidence 445555554433 23445555666778888888888877754 321 36 8899999999999998764
Q ss_pred cCCCCCe--EEecCCccchHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHH
Q 009181 222 RGITRPE--MIIPVSAHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQE 294 (541)
Q Consensus 222 ~Gi~~~~--vi~~~~~h~s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~ 294 (541)
+| ++ |+++.+.|+.+...++..|++++.+|+++ ++.+|++++++++.++++++++++|+||||.+.+ +++
T Consensus 113 ~g---d~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~ 189 (393)
T TIGR03538 113 PG---QAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKK 189 (393)
T ss_pred CC---CcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCcCcccCHHHHHH
Confidence 56 54 99999999999999999999999999964 4689999999999889999999999999999977 788
Q ss_pred HHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCC-C---C-cC--CCCceEEEeCCCC-CCCCCCCceEEEEecccccc
Q 009181 295 LGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP-F---D-FS--VQGVTSISVDVHK-YGLAPKGTSVVLYRNREIRK 366 (541)
Q Consensus 295 I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~-~---~-~~--~~gvdsis~~~hK-~~~~p~g~g~ll~~~~~~~~ 366 (541)
|+++|++|++++++|++|+.+... . +...+. + + .. ...-.++..++.| ++.++..+|+++.. +++..
T Consensus 190 l~~~a~~~~~~ii~De~Y~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~-~~l~~ 264 (393)
T TIGR03538 190 LIELADQYGFIIASDECYSELYFD---E-GNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGD-AEILK 264 (393)
T ss_pred HHHHHHHCCEEEEECcchhhcccC---C-CCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecC-HHHHH
Confidence 999999999999999999865431 0 000000 0 0 00 0112366778899 56777789986654 43332
Q ss_pred cccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEE
Q 009181 367 HQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG-QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVA 445 (541)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~ 445 (541)
...... .+. +... ....+++++..+. .+.+++..+...+.++.+.+.|++. +.+..+..+.+++
T Consensus 265 ~~~~~~-~~~----------~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~gg~f~~ 329 (393)
T TIGR03538 265 AFLRYR-TYH----------GCAM--PIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV--LDLELPDAGFYLW 329 (393)
T ss_pred HHHHHH-Hhh----------ccCc--CHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh--CcccCCCeeEEEE
Confidence 211110 000 0000 1224444444443 3456677777788888888888764 3344445566777
Q ss_pred EecCCCCHHHHHHHHH-hCCceecc---CC--------CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 009181 446 FGSDVVDIFEVNDIMS-SKGWHLNP---LQ--------RPNSIHICVTLQHVAVVDVFLRDLRES 498 (541)
Q Consensus 446 f~~~~~~~~~l~~~l~-~~G~~~~~---~~--------~~~~iRi~~~~~~~e~id~~i~~L~~~ 498 (541)
++.+ .+..++.+.|. ++|+.+.. +. .++++|+|++. +.+++++.+++|++.
T Consensus 330 ~~~~-~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 330 PKVP-GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA-PLEECVEAAERIRSF 392 (393)
T ss_pred EECC-CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-CHHHHHHHHHHHHHh
Confidence 7765 45677888875 57876522 11 13689999986 568888888888764
No 160
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.88 E-value=2.1e-20 Score=196.54 Aligned_cols=297 Identities=15% Similarity=0.116 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCe
Q 009181 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIK 249 (541)
Q Consensus 170 ~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~ 249 (541)
.....++.+.+++++|.+ .. ++.++|++|+..++.+++.. .++ +.|+.....|.+....+...|++
T Consensus 90 ~~~~~~l~~~la~~~g~~-~~-------~~~~sG~~an~~ai~~l~~~---~~~---~~i~~~~~~h~s~~~~~~~~~~~ 155 (407)
T PRK09064 90 NHYHVELERELADLHGKE-AA-------LVFTSGYVSNDATLSTLAKL---IPD---CVIFSDELNHASMIEGIRRSRCE 155 (407)
T ss_pred HHHHHHHHHHHHHHhCCC-cE-------EEECcHHHHHHHHHHHHhCC---CCC---CEEEEeCcchHHHHHHHHHcCCc
Confidence 344556777888998853 22 56666788999988887532 123 55666777899988888888988
Q ss_pred EEEeeCCCCCccCHHHHHHhhc----cCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCC
Q 009181 250 LWRVPVDKEFRADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGY 325 (541)
Q Consensus 250 v~~v~~~~~~~~d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~ 325 (541)
+..++.+ |++++++.++ +++++|+++++++++|.+.|+++|.++|++||++|++|++|+.+.+ ...|.
T Consensus 156 ~~~~~~~-----d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~---g~~g~ 227 (407)
T PRK09064 156 KHIFRHN-----DVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMY---GPRGG 227 (407)
T ss_pred EEEECCC-----CHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCccccc---CCCCC
Confidence 8777653 7788888775 4688999999999999999999999999999999999999973322 11121
Q ss_pred CCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh
Q 009181 326 PIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG 405 (541)
Q Consensus 326 ~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg 405 (541)
......-....+|++..+++|. +++.| |+++. ++++..........|.. ..+.+....+++.++++.+.
T Consensus 228 g~~~~~~~~~~~div~~t~sKa-~g~~G-G~~~~-~~~~~~~l~~~~~~~~~--------t~~~~~~~~~aa~~al~~~~ 296 (407)
T PRK09064 228 GIAERDGLMDRIDIIEGTLAKA-FGVMG-GYIAG-SAALVDAVRSYAPGFIF--------TTSLPPAIAAAALASIRHLK 296 (407)
T ss_pred ChHHhcCCCCCCeEEEEecchh-hhccC-ceEec-CHHHHHHHHHhCccccc--------cCcCCHHHHHHHHHHHHHHh
Confidence 1101100113468888899998 56665 65444 44433321111111110 11111122345556665553
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-CCHHHHHHHHHh-CCceeccCCC---C---CeEE
Q 009181 406 QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-VDIFEVNDIMSS-KGWHLNPLQR---P---NSIH 477 (541)
Q Consensus 406 ~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~~~~~l~~~l~~-~G~~~~~~~~---~---~~iR 477 (541)
.. ....++..++++++.+.|+++ +++++. +..+++.+...+ .+..++.+.|.+ +|+.+..... | +.+|
T Consensus 297 ~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lR 372 (407)
T PRK09064 297 ES--NEERERHQERAAKLKAALDAA-GIPVMP-NESHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLR 372 (407)
T ss_pred cC--HHHHHHHHHHHHHHHHHHHHc-CCCCCC-CCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEE
Confidence 33 344678888999999999986 777664 445666666543 246688888864 5887754322 2 5799
Q ss_pred EEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 478 ICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 478 i~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
++++..++ +|++++++.|+++++++.
T Consensus 373 is~~~~~t~edi~~l~~~l~~~~~~~~ 399 (407)
T PRK09064 373 ITPTPFHTDEMIDHLVEALVEVWARLG 399 (407)
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 99998877 999999999999987653
No 161
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=2.7e-20 Score=195.41 Aligned_cols=298 Identities=15% Similarity=0.119 Sum_probs=202.0
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhh
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQY 245 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~ 245 (541)
|...++|+-+.+.+++++|.+... +++++|+.|+..++.++.. +| ++|+++...|.+ +...++.
T Consensus 70 ~~~~~lE~~~~~~la~l~g~~~al-------v~~~SG~~A~~~~l~al~~-----~G---D~Vl~~~~~~~~~~~~g~~~ 134 (416)
T PRK13034 70 EFVDEVEALAIERAKQLFGCDYAN-------VQPHSGSQANGAVYLALLK-----PG---DTILGMSLSHGGHLTHGAKV 134 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCCceE-------EecCCcHHHHHHHHHHhcC-----CC---CEEEEcCccceeeeecCCcc
Confidence 566777777778999999987431 4578899999999998743 77 999999999987 3333332
Q ss_pred --cCCeE--EEeeCCC-CCccCHHHHHHhhcc-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhh
Q 009181 246 --FNIKL--WRVPVDK-EFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPF 319 (541)
Q Consensus 246 --~G~~v--~~v~~~~-~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f 319 (541)
.+... ..++++. ++.+|++++++.+.. ++++|+++.+. +|..-|+++|.++|++||+++++|+|++.+++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~- 211 (416)
T PRK13034 135 SLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELDFARFREIADEVGALLMVDMAHIAGLVA- 211 (416)
T ss_pred eeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccCHHHHHHHHHHcCCEEEEeCcccccCcc-
Confidence 22222 3444543 677999999999854 68888776543 588889999999999999999999998776552
Q ss_pred hhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHH
Q 009181 320 AKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 320 ~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
.|. ......++|++++++||++.+|.| |+++..++.+....... -+. ++.+...-..+++...
T Consensus 212 ---~g~----~~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~aa~~~ 274 (416)
T PRK13034 212 ---AGE----HPNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKKINSA--VFP-------GLQGGPLMHVIAAKAV 274 (416)
T ss_pred ---cCC----CCCCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHHHHHhh--cCC-------cccCCccHHHHHHHHH
Confidence 121 111224589999999999767776 54555554432211100 011 0011111112333333
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC-CCeeEEEEecC--CCCHHHHHHHHHhCCceeccCC-----
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR-PDMTIVAFGSD--VVDIFEVNDIMSSKGWHLNPLQ----- 471 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~f~~~--~~~~~~l~~~l~~~G~~~~~~~----- 471 (541)
++...-..+..+..++..+++++|++.|++. |+++..+ .+.+++.+.+. +.+...+.+.|.++|+.++...
T Consensus 275 al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~ 353 (416)
T PRK13034 275 AFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDT 353 (416)
T ss_pred HHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCC
Confidence 4333322344567799999999999999988 9998753 45566655543 3366777889999998776522
Q ss_pred ----CCCeEEEEecC----CCH-HHHHHHHHHHHHHHH
Q 009181 472 ----RPNSIHICVTL----QHV-AVVDVFLRDLRESVE 500 (541)
Q Consensus 472 ----~~~~iRi~~~~----~~~-e~id~~i~~L~~~~~ 500 (541)
.+..+|++++. .++ +|++++++.|++++.
T Consensus 354 ~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 354 ESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred cCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 23579999776 333 999999999999976
No 162
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.88 E-value=4e-20 Score=188.62 Aligned_cols=285 Identities=23% Similarity=0.252 Sum_probs=221.9
Q ss_pred HHHHHHHHHhC-CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEe
Q 009181 175 EVIAMTAALLG-NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (541)
Q Consensus 175 ev~~~la~l~g-~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v 253 (541)
++++.+++.+| .++++ | ++++|++|.+...++++.. +| +.|+++.+++..+...++..|++++.|
T Consensus 61 ~l~~a~a~~~~~~~~~~----V--~~gnGsde~i~~l~~~~~~-----~g---d~vl~~~Ptf~~Y~~~a~~~g~~~~~v 126 (356)
T COG0079 61 ELRAALAEYYGVVDPEN----V--LVGNGSDELIELLVRAFVE-----PG---DTVLIPEPTFSMYEIAAQLAGAEVVKV 126 (356)
T ss_pred HHHHHHHHHhCCCCcce----E--EEcCChHHHHHHHHHHhhc-----CC---CEEEEcCCChHHHHHHHHhcCCeEEEe
Confidence 46668999999 66554 5 7899999999999999985 66 899999999999999999999999999
Q ss_pred eCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHc--CCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 254 PVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH--GTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 254 ~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~--~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
|.++ +.+|++.+.+++.+++.+|++++||||||...+.++|.+++... +.+|++|+||.-|.-+ .. ++...
T Consensus 127 ~~~~-~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~--~~----~~l~~ 199 (356)
T COG0079 127 PLKE-FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPE--SS----LELLK 199 (356)
T ss_pred cccc-cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCc--hh----hhhcc
Confidence 9988 99999999999999999999999999999999988888887754 8899999999766531 00 11111
Q ss_pred cCCCCceEEEeCCCC-CCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh-HHHH
Q 009181 332 FSVQGVTSISVDVHK-YGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG-QEGY 409 (541)
Q Consensus 332 ~~~~gvdsis~~~hK-~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg-~~g~ 409 (541)
...--.+.=++.| +|.++..+|+ .+.++++.........+|... ..++.++...+. .+.+
T Consensus 200 --~~~nlivlRTfSKa~gLAGlRlGy-~ia~~~~i~~l~~vr~p~~v~---------------~~a~~aa~aal~~~~~~ 261 (356)
T COG0079 200 --YPPNLIVLRTFSKAFGLAGLRVGY-AIANPELIAALNKVRPPFNVS---------------SPALAAAIAALRDADYL 261 (356)
T ss_pred --CCCCEEEEEecHHhhhcchhceee-ccCCHHHHHHHHHhcCCCCCC---------------HHHHHHHHHHcccHHHH
Confidence 1111244557789 5677788997 777777777666666666543 224444444442 3678
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCC----CCCeEEEEecCCCH
Q 009181 410 LENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQ----RPNSIHICVTLQHV 485 (541)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~----~~~~iRi~~~~~~~ 485 (541)
++..+.+.+.++++.+.|++++ +.-+.+...+++.++..+.....+.+.|.++|+.+.... .++++||+++ +.
T Consensus 262 ~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~~~~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg--t~ 338 (356)
T COG0079 262 EESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPDAEAAALAEALLKKGILVRDCSSVGLLPGYLRITVG--TP 338 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCCccHHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC--CH
Confidence 8889999999999999999986 553445568888888765225689999999998776542 2369999998 35
Q ss_pred HHHHHHHHHHHHHHHH
Q 009181 486 AVVDVFLRDLRESVET 501 (541)
Q Consensus 486 e~id~~i~~L~~~~~~ 501 (541)
++.++++++|+++++.
T Consensus 339 een~~ll~AL~~~~~~ 354 (356)
T COG0079 339 EENDRLLAALREVLKG 354 (356)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 7779999999998754
No 163
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.88 E-value=1.3e-20 Score=196.13 Aligned_cols=281 Identities=18% Similarity=0.143 Sum_probs=195.2
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH---
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA--- 242 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka--- 242 (541)
.|...++|+ .+++++|.+. . +++++|+.|+..++.++.. +| ++|+++.+.|......
T Consensus 60 ~pt~~~Le~----~lA~l~G~~~-a-------l~~~sG~~Ai~~~l~al~~-----~G---d~Vv~~~~~y~~~~~~~~~ 119 (386)
T PRK06767 60 NPTVKLFEE----RMAVLEGGEE-A-------LAFGSGMAAISATLIGFLK-----AG---DHIICSNGLYGCTYGFLEV 119 (386)
T ss_pred CcchHHHHH----HHHHHhCCCc-E-------EEECCHHHHHHHHHHHHhC-----CC---CEEEEcCCcHHHHHHHHHH
Confidence 355555555 8899999753 2 6777888898888877653 67 8999999988775444
Q ss_pred -HhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 243 -AQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 243 -~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
+...|+++..++.. |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+...
T Consensus 120 ~~~~~gi~~~~~~~~-----d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~--- 191 (386)
T PRK06767 120 LEEKFMITHSFCDME-----TEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQ--- 191 (386)
T ss_pred HHhhcCeEEEEeCCC-----CHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 34457777666543 899999999999999999999999999999999999999999999999998643321
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHH
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
. ++ ..|+|+++.+++|++.++.. .|+++.+++.+..........+ |+ ... ...+|+
T Consensus 192 -----~-pl---~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~-g~----------~~~--~~~a~l 249 (386)
T PRK06767 192 -----R-PL---ELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDI-GG----------IMA--PFDAWL 249 (386)
T ss_pred -----C-ch---hcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHh-CC----------CCC--HHHHHH
Confidence 1 12 35789999999999544433 4765554432221111111111 11 111 124566
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------CeeEEEEecCCC--CHHHHHHHHHhCCce
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------DMTIVAFGSDVV--DIFEVNDIMSSKGWH 466 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------~~~~v~f~~~~~--~~~~l~~~l~~~G~~ 466 (541)
+++. .+.+..+.++..++++++++.|+++|+++.+..| ..++++|..++. +..++.+.|...++.
T Consensus 250 ~~~~--L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~ 327 (386)
T PRK06767 250 LLRG--LKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIA 327 (386)
T ss_pred HHcC--CCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEe
Confidence 5543 3455678889999999999999999999865432 357899998643 456677777654411
Q ss_pred --------e---c--------------cCC-CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 467 --------L---N--------------PLQ-RPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 467 --------~---~--------------~~~-~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
+ + ..+ .++.+|+|++. ||.+.++++|+++++.
T Consensus 328 ~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 328 VSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALKK 385 (386)
T ss_pred cCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 0 0 011 12679999998 7788899999988764
No 164
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=1e-19 Score=189.49 Aligned_cols=311 Identities=15% Similarity=0.106 Sum_probs=216.0
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHH-----hhcC-----------------
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMR-----NKRG----------------- 223 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~-----~~~G----------------- 223 (541)
...+.++|..+.+...++||++..+ +-..+|+.||+.+..++....- .++|
T Consensus 90 ~~~~d~ie~l~~~ra~~lf~a~~an-------vqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~ 162 (493)
T PRK13580 90 CQNVDTVEWEAAEHAKELFGAEHAY-------VQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRA 162 (493)
T ss_pred CchHHHHHHHHHHHHHHHhCCCccc-------ccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhc
Confidence 3457789999999999999998876 4667789999999998874200 0011
Q ss_pred -CCCCeEEecCC---ccchHHHHHhhcC--CeEEEeeCCC-CCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHH
Q 009181 224 -ITRPEMIIPVS---AHSAYDKAAQYFN--IKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELG 296 (541)
Q Consensus 224 -i~~~~vi~~~~---~h~s~~ka~~~~G--~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~ 296 (541)
...++|+.-.. .|.+........| .+++..++++ ++.+|.+++++.+.+++..|++++.++. |...|+++|.
T Consensus 163 ~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~ 241 (493)
T PRK13580 163 ELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAY-PRRVNFAKLR 241 (493)
T ss_pred cCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHH
Confidence 11267765433 3444333333444 3566667764 7899999999999999888888888886 5577999999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccC
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWS 376 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~ 376 (541)
++|++||++++||+|++.++++ ...+ ...++ ...++|++++++||+++||.| |++++++ ++.......
T Consensus 242 eia~~~gA~L~VD~AH~~Glig--g~~~--~~~~~-~~~~~D~vtgT~hKaL~GP~G-G~I~~~~-~l~~~L~~a----- 309 (493)
T PRK13580 242 EIADEVGAVLMVDMAHFAGLVA--GKVF--TGDED-PVPHADIVTTTTHKTLRGPRG-GLVLAKK-EYADAVDKG----- 309 (493)
T ss_pred HHHHHcCCEEEEECchhhceec--cccc--hhhcC-CCCCCcEEEeCChhhccCCCe-EEEEecH-HHHHHHhhC-----
Confidence 9999999999999999887764 1110 00011 135789999999999778886 6666654 333221111
Q ss_pred CCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEec-CCCeeEEEEecCCCC--H
Q 009181 377 GGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIG-RPDMTIVAFGSDVVD--I 453 (541)
Q Consensus 377 ~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~~~~~~v~f~~~~~~--~ 453 (541)
.|.+.|+..-..+++...++..+....+++..++..+++++|++.|.+. |+.++. ..+.+++.+...+.. .
T Consensus 310 -----~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg~~~~~g 383 (493)
T PRK13580 310 -----CPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVTSFGLTG 383 (493)
T ss_pred -----CCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeCCHHHHH
Confidence 1222222222234455555655544456788999999999999999987 888863 345788888876543 3
Q ss_pred HHHHHHHHhCCceeccCCC---------CCeEEEEecCCC-----HHHHHHHHHHHHHHHHHH
Q 009181 454 FEVNDIMSSKGWHLNPLQR---------PNSIHICVTLQH-----VAVVDVFLRDLRESVETV 502 (541)
Q Consensus 454 ~~l~~~l~~~G~~~~~~~~---------~~~iRi~~~~~~-----~e~id~~i~~L~~~~~~l 502 (541)
..+.+.|.+.|+.++.... +..||++++..+ .+|++++++.|.++++..
T Consensus 384 ~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 384 RQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred HHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 4677899999988764322 357999987644 389999999999988754
No 165
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=6.2e-20 Score=192.62 Aligned_cols=292 Identities=17% Similarity=0.179 Sum_probs=198.4
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHH--
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA-- 243 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~-- 243 (541)
.|.+.++|+ .++++.|.+. . ++|++||+|+.+++.++. ++| ++|+++...|.+....+
T Consensus 63 ~p~~~~le~----~lA~l~g~~~------a--v~~sSGt~Al~~al~~ll-----~~G---d~Vi~~~~~y~~t~~~~~~ 122 (433)
T PRK08134 63 NPTVAVLEE----RVAALEGGVG------A--IATASGQAALHLAIATLM-----GAG---SHIVASSALYGGSHNLLHY 122 (433)
T ss_pred ChHHHHHHH----HHHHHhCCCc------E--EEeCCHHHHHHHHHHHHh-----CCC---CEEEEeCCccHHHHHHHHH
Confidence 355555554 8888888764 2 799999999999998873 266 89999999998765544
Q ss_pred --hhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 244 --QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 244 --~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
..+|++++.++++ |+++++++|+++|++|++++++||+|.+.|+++|+++|+++|++++||++++....+
T Consensus 123 ~l~~~Gi~v~~vd~~-----d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~--- 194 (433)
T PRK08134 123 TLRRFGIETTFVKPG-----DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLL--- 194 (433)
T ss_pred HHhhCCeEEEEECCC-----CHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 4579999999875 899999999999999999999999999999999999999999999999998654431
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEeccccc--c-----cccccccccCCCccCCC---------
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIR--K-----HQFVAVTEWSGGLYVSP--------- 383 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~--~-----~~~~~~~~~~~~~~~~~--------- 383 (541)
+....|+|+++.|.||| ++|.| .|.+++...... . ........| ++...+.
T Consensus 195 ---------~pl~~GaD~vv~S~tK~-l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~ 263 (433)
T PRK08134 195 ---------RPFEHGADLVYHSATKF-LGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGF-HGMVFAEESTVAAFLL 263 (433)
T ss_pred ---------CchhcCCCEEEeccccc-cCCCCCceEEEEEecCccccccccccccccCCcccc-cccchhhccchhHHHH
Confidence 11246899999999999 46655 455555332211 0 000000011 0110000
Q ss_pred -------cccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------
Q 009181 384 -------TVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP----------------- 439 (541)
Q Consensus 384 -------~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~----------------- 439 (541)
...|.... ...+|..+ .|.+.+..+.++..+++..+.+.|++.|.+.-+.-|
T Consensus 264 ~~~~~~~~~~G~~ls--~~~A~l~~--~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~ 339 (433)
T PRK08134 264 RARREGLRDFGACLS--PMNAWQLL--QGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPR 339 (433)
T ss_pred HHHHHHHHhcCCCCC--HHHHHHHh--cCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCC
Confidence 00111111 22444444 466778999999999999999999998876533221
Q ss_pred -CeeEEEEecCCC--CHHHHHHHHHh--CCc--------ee-c--------------cCCC-CCeEEEEecCCCHHHHHH
Q 009181 440 -DMTIVAFGSDVV--DIFEVNDIMSS--KGW--------HL-N--------------PLQR-PNSIHICVTLQHVAVVDV 490 (541)
Q Consensus 440 -~~~~v~f~~~~~--~~~~l~~~l~~--~G~--------~~-~--------------~~~~-~~~iRi~~~~~~~e~id~ 490 (541)
..++++|.+++. ...++.+.|.- .+. .. . ..+. ++.+|+|++. |+.|.
T Consensus 340 g~gg~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl---E~~~d 416 (433)
T PRK08134 340 GAGSVFSFDLKGGRAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGL---EDADD 416 (433)
T ss_pred CCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc---CCHHH
Confidence 257888988642 23334433321 110 00 0 0111 2579999998 77888
Q ss_pred HHHHHHHHHHHHH
Q 009181 491 FLRDLRESVETVK 503 (541)
Q Consensus 491 ~i~~L~~~~~~l~ 503 (541)
++++|+++++..+
T Consensus 417 li~dl~~Al~~~~ 429 (433)
T PRK08134 417 LIDDLKRALKAAE 429 (433)
T ss_pred HHHHHHHHHHhhh
Confidence 9999999988654
No 166
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.87 E-value=2.5e-20 Score=193.12 Aligned_cols=280 Identities=18% Similarity=0.150 Sum_probs=196.4
Q ss_pred cchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHH---
Q 009181 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK--- 241 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~k--- 241 (541)
..|...++|+ .+++++|.+. . +++++|++|+..++.++.. +| ++|+++...|.+...
T Consensus 38 ~~p~~~~le~----~la~l~g~~~------a--~~~~sG~~Ai~~~l~~l~~-----~g---d~Vl~~~~~y~~~~~~~~ 97 (369)
T cd00614 38 GNPTVDALEK----KLAALEGGEA------A--LAFSSGMAAISTVLLALLK-----AG---DHVVASDDLYGGTYRLFE 97 (369)
T ss_pred CChhHHHHHH----HHHHHHCCCC------E--EEEcCHHHHHHHHHHHHcC-----CC---CEEEECCCCcchHHHHHH
Confidence 3455555555 8888888753 2 7888899999999998753 66 899999999987543
Q ss_pred -HHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 242 -AAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 242 -a~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
.+..+|++++.++.+ |++++++++++++++|++++|+||+|.+.|+++|+++|++||++++||++++.+...
T Consensus 98 ~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-- 170 (369)
T cd00614 98 RLLPKLGIEVTFVDPD-----DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-- 170 (369)
T ss_pred HHHhhcCeEEEEeCCC-----CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC--
Confidence 455779999999876 699999999999999999999999999999999999999999999999998765430
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHH
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAW 398 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~ 398 (541)
.++ ..|+|+++.+++|++.++.. .|+++.+++++.......... .|.... ...+|
T Consensus 171 -------~~~---~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~-----------~g~~~~--p~~a~ 227 (369)
T cd00614 171 -------RPL---ELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLA-----------LGTILS--PFDAW 227 (369)
T ss_pred -------Chh---hhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHh-----------hCCCCC--HHHHH
Confidence 112 34789999999999654432 676666553443322111111 011111 23567
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCC--CHHHHHHH
Q 009181 399 AALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVV--DIFEVNDI 459 (541)
Q Consensus 399 ~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~--~~~~l~~~ 459 (541)
++++.+ +.+..+.++..++++++.+.|++.|+++-+.-| ..++++|.+++. ...++.+.
T Consensus 228 ~~l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~ 305 (369)
T cd00614 228 LLLRGL--KTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNA 305 (369)
T ss_pred HHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHc
Confidence 666444 456678888999999999999998876544322 368999998641 23333333
Q ss_pred HHhC--Cc--------ee-----c----------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 009181 460 MSSK--GW--------HL-----N----------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 460 l~~~--G~--------~~-----~----------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~ 499 (541)
|.-- +. .. . ..+. ++.+|+|++. ||++.++++|++++
T Consensus 306 l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl---E~~~dl~~dl~~al 368 (369)
T cd00614 306 LKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI---EDVEDLIADLEQAL 368 (369)
T ss_pred CCcceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence 3221 10 00 0 0121 3689999998 77888999998875
No 167
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.87 E-value=1.5e-20 Score=194.79 Aligned_cols=276 Identities=17% Similarity=0.172 Sum_probs=194.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHH----HHhhcCCe
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK----AAQYFNIK 249 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~k----a~~~~G~~ 249 (541)
.++++.+++++|.+. + +++++|+.|+.+++. +. ++| ++|+++.+.|.++.. .+..+|++
T Consensus 50 ~~le~~la~l~g~~~------~--l~~~sG~~al~~~l~-ll-----~~G---d~Vl~~~~~y~~~~~~~~~~~~~~G~~ 112 (378)
T TIGR01329 50 TALESLLAKLDKADR------A--FAFSSGMAALDVITR-LL-----NNG---DEIIAGDDLYGGTDRLLTQVVPRSGVV 112 (378)
T ss_pred HHHHHHHHHHhCCCc------E--EEECCHHHHHHHHHH-Hh-----CCC---CEEEEcCCCchHHHHHHHHHHHHcCcE
Confidence 346668999999842 2 566777778776554 32 366 899999999988654 45667999
Q ss_pred EEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCC
Q 009181 250 LWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP 329 (541)
Q Consensus 250 v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~ 329 (541)
++.++.+ |+++++++++++|++|++++|+||+|.+.|+++|+++|+++|++++||++++.... ..+
T Consensus 113 v~~vd~~-----d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~---------~~~ 178 (378)
T TIGR01329 113 VVHVDTT-----DLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL---------CNP 178 (378)
T ss_pred EEEeCCC-----CHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc---------CCh
Confidence 9999874 89999999999999999999999999999999999999999999999999864432 112
Q ss_pred CCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHH
Q 009181 330 FDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQE 407 (541)
Q Consensus 330 ~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~ 407 (541)
+ ..|+|++..++|||+++|.+ .|+++.+++++......... ..| .... ...+|..+ .+.+
T Consensus 179 l---~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~--~~G---------~~~~--~~~a~l~~--~~l~ 240 (378)
T TIGR01329 179 L---ELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQN--STG---------SGLA--PFDCWLLL--RGIK 240 (378)
T ss_pred h---hcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHH--hcC---------CcCC--HHHHHHHH--ccCC
Confidence 3 34889999999999888877 78777766554222111110 011 1111 11344443 4556
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCeEE-ecC----------------CCeeEEEEecCCCC-HHHHHHHHHhCCce---
Q 009181 408 GYLENTKAIMEVSESIQKGIKEIPELFI-IGR----------------PDMTIVAFGSDVVD-IFEVNDIMSSKGWH--- 466 (541)
Q Consensus 408 g~~~~~~~~~~~a~~l~~~L~~~~~~~v-~~~----------------~~~~~v~f~~~~~~-~~~l~~~l~~~G~~--- 466 (541)
.+..+.++...++..+.+.|++.|.+.- ..| ...++++|.+.+.+ ..++.+.|..-++.
T Consensus 241 tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~ 320 (378)
T TIGR01329 241 TLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSF 320 (378)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCC
Confidence 7788888888899999999988776532 221 12479999985433 56777777543310
Q ss_pred ------------ec----------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 467 ------------LN----------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 467 ------------~~----------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
.. ..+. ++.+|+|++. ||++.++++|+++++.
T Consensus 321 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 321 GSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI---EDVDDLISDLDIAFVT 375 (378)
T ss_pred CCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHh
Confidence 00 0111 3689999997 7788999999998864
No 168
>PRK09148 aminotransferase; Validated
Probab=99.87 E-value=2.1e-19 Score=188.69 Aligned_cols=309 Identities=12% Similarity=0.102 Sum_probs=211.5
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
..|....|..++.+.+.+++.+.+|.+ +++ ++ ++|+|+++++..++.++.+ +| ++|++++++|+.
T Consensus 62 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---~I--~it~G~~~al~~~~~~l~~-----~g---d~Vl~~~P~y~~ 128 (405)
T PRK09148 62 HRYSASKGIPGLRRAQAAYYARRFGVKLNPDT---QV--VATLGSKEGFANMAQAITA-----PG---DVILCPNPSYPI 128 (405)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---cE--EEcCChHHHHHHHHHHhcC-----CC---CEEEEcCCCCcc
Confidence 344445567788888888888777754 431 26 8999999999999988864 66 899999999999
Q ss_pred HHHHHhhcCCeEEEeeCCCC--CccCHHHHHHhhccCceEEEeecCCCCCccccCH---HHHHHHHHHcCCEEEEeCCcc
Q 009181 239 YDKAAQYFNIKLWRVPVDKE--FRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPI---QELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~~--~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i---~~I~~la~~~~i~lhvD~a~g 313 (541)
+...++.+|++++.+|++++ +..+++++.+...++++++++++|+||||.+.+. ++|.++|++|++++++|++|+
T Consensus 129 ~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~ 208 (405)
T PRK09148 129 HAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYS 208 (405)
T ss_pred cHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccch
Confidence 99999999999999998753 3344444444445689999999999999999885 688999999999999999998
Q ss_pred cchhhhhhhcCCCCCCCC-c-CCCCceEEEeCCCCCCC-CCCCceEEEEeccccccccccccc--ccCCCccCCCcccCC
Q 009181 314 GFVLPFAKKLGYPIPPFD-F-SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVT--EWSGGLYVSPTVAGS 388 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~~-~-~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~--~~~~~~~~~~~~~gs 388 (541)
.+... . ...+.+. . ...+..++..++.|... .+..+|+++. ++++......... .|.. +
T Consensus 209 ~~~~~--~---~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i~~l~~~~~~~~~~~----------~ 272 (405)
T PRK09148 209 EIYFD--G---NPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLIAALTRVKSYLDYGA----------F 272 (405)
T ss_pred hhhcC--C---CCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC-CHHHHHHHHHHHHHhccCC----------C
Confidence 76531 1 0011111 1 11234556788899842 4445898664 4444432211110 1100 0
Q ss_pred CCCchHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC----CHHHHHHHHH-
Q 009181 389 RPGGLIAGAWAALMSLG--QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV----DIFEVNDIMS- 461 (541)
Q Consensus 389 r~~~~~a~~~~al~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~----~~~~l~~~l~- 461 (541)
...+.++...+. ...+++..+.+.++++++.+.|++. ++.+..+....+++++.++. +..++.+.+.
T Consensus 273 -----~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~ 346 (405)
T PRK09148 273 -----TPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVE 346 (405)
T ss_pred -----hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccCCCCeeEEEEEECCCccCCCCHHHHHHHHHH
Confidence 124444444453 3456777788888999999999986 67654444455677776532 3567877765
Q ss_pred hCCceecc---CC--CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHcC
Q 009181 462 SKGWHLNP---LQ--RPNSIHICVTLQHVAVVDVFLRDLRESVETVKQN 505 (541)
Q Consensus 462 ~~G~~~~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~~~ 505 (541)
++|+.+.. ++ .++++||+++ ...+.+++.+++|+++++...+.
T Consensus 347 ~~gV~v~pg~~f~~~~~~~~Ri~~~-~~~~~l~~al~~l~~~l~~~~~~ 394 (405)
T PRK09148 347 KADVAVAPGVGFGEHGDGYVRIALV-ENEQRIRQAARNIKRFLSSADET 394 (405)
T ss_pred hCCEEEeCchhhCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 67876543 22 2478999998 45688899999998888766653
No 169
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=4e-20 Score=191.19 Aligned_cols=283 Identities=16% Similarity=0.114 Sum_probs=198.2
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH---
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA--- 242 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka--- 242 (541)
.|....+|+ .++++.|.. + + ++++||++|+..++.++.+ +| ++|+++.+.|..+...
T Consensus 60 npt~~~Le~----~iA~le~~~--~----~--~~~~sG~~Ai~~~l~all~-----~G---D~Vvv~~~~Y~~t~~l~~~ 119 (394)
T PRK09028 60 TPTHFAFQA----AIVELEGGA--G----T--ALYPSGAAAISNALLSFLK-----AG---DHLLMVDSCYEPTRDLCDK 119 (394)
T ss_pred CchHHHHHH----HHHHHhCCC--c----E--EEECCHHHHHHHHHHHHhC-----CC---CEEEEECCCcHHHHHHHHH
Confidence 455555555 677776654 2 3 8999999999999988753 67 9999999999776643
Q ss_pred -HhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 243 -AQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 243 -~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
...+|+++..++.+ +.+.++++++++|++|++++|+||+|.+.|+++|+++|+++|++++||++|+.+..
T Consensus 120 ~l~~~Gi~v~~v~~~-----~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~---- 190 (394)
T PRK09028 120 ILKGFGIETTYYDPM-----IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN---- 190 (394)
T ss_pred hhhhcceEEEEECCC-----CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc----
Confidence 34578888887643 56889999999999999999999999999999999999999999999999975432
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHH
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
++....|+|++..+.|||+.|+.+ .|+ ++.+++........ .... |.-.. ...+|.
T Consensus 191 --------~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~-~~~~~~~~~~l~~~-~~~~----------G~~~~--p~~a~l 248 (394)
T PRK09028 191 --------SRPFEMGVDISIQAATKYIVGHSDVMLGT-ATANEKHWDQLREH-SYLM----------GQCTS--PDDVYL 248 (394)
T ss_pred --------CCccccCceEEEEeCCeEecCCCCEEEEE-EECCHHHHHHHHHH-HHhc----------CCCCC--HHHHHH
Confidence 222457999999999999777754 454 45555432211100 0001 11111 236776
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCCCH---HHHHHH
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVVDI---FEVNDI 459 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~~~---~~l~~~ 459 (541)
.+ .|...+.-+.++..+++..+++.|++.|.++-+.-| ..++++|.+++.+. .++.+.
T Consensus 249 ~~--rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~ 326 (394)
T PRK09028 249 AM--RGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEG 326 (394)
T ss_pred HH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHh
Confidence 66 466778889999999999999999999887543222 25799999863332 333333
Q ss_pred HHh--CCc--------eecc-----------CC-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHc
Q 009181 460 MSS--KGW--------HLNP-----------LQ-RPNSIHICVTLQHVAVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 460 l~~--~G~--------~~~~-----------~~-~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~~ 504 (541)
|.- .+. .... .+ .++.+|+|++. ||.+.++++|+++++..+.
T Consensus 327 l~l~~~~~slG~~~sLv~~p~~~~~~~~~~~~~~~~~liR~svGl---Ed~~dLi~Dl~~Al~~~~~ 390 (394)
T PRK09028 327 MQHFKMGFSWGGFESLILGVFGINKLRTATNWDFSKPLIRLHIGL---EDVDDLIADLEAGFERYNA 390 (394)
T ss_pred CCcceEecccCCCcceeECCCCcCccCchhhhcCCCCeEEEEeCc---CCHHHHHHHHHHHHHHHHH
Confidence 321 110 0000 00 12579999998 6788888888888876653
No 170
>PRK06855 aminotransferase; Validated
Probab=99.87 E-value=9.5e-20 Score=192.74 Aligned_cols=312 Identities=13% Similarity=0.064 Sum_probs=208.2
Q ss_pred CCCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc
Q 009181 160 PLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (541)
Q Consensus 160 ~~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~ 237 (541)
.++|....|..++.+.+.+++.+..|.+ +++ | ++|+|+++++..++. +. .+| ++|++++++|+
T Consensus 66 ~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~----I--~it~G~~~al~~~~~-l~-----~~G---d~Vlv~~P~Y~ 130 (433)
T PRK06855 66 SYGYCPTKGVLETREFLAELNNKRGGAQITPDD----I--IFFNGLGDAIAKIYG-LL-----RRE---ARVIGPSPAYS 130 (433)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhH----E--EEcCcHHHHHHHHHH-hc-----CCC---CeEEEeCCCCc
Confidence 3456666777888888888888876654 444 7 899999999988874 33 266 89999999999
Q ss_pred hHHHHH-hhcCCeEEEeeCCC--CCccCHHHHHHhhc--cCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEe
Q 009181 238 AYDKAA-QYFNIKLWRVPVDK--EFRADVKAIKKYIN--RNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVD 309 (541)
Q Consensus 238 s~~ka~-~~~G~~v~~v~~~~--~~~~d~~~Le~~i~--~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD 309 (541)
.+..+. ...|++++.+|+++ ++.+|+++|++++. ++++++++++|+||||.+.+ +++|+++|++||+|+++|
T Consensus 131 ~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~D 210 (433)
T PRK06855 131 THSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICD 210 (433)
T ss_pred hHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 876553 45689999999874 56899999999997 45788999999999999987 667888999999999999
Q ss_pred CCcccchhhhhhhcCCCCCCC-CcCCCCceEEEeCCCCCCC-CCCCceEEEEec----ccccccccccccccCCCccCCC
Q 009181 310 LCLGGFVLPFAKKLGYPIPPF-DFSVQGVTSISVDVHKYGL-APKGTSVVLYRN----REIRKHQFVAVTEWSGGLYVSP 383 (541)
Q Consensus 310 ~a~gg~~~~f~~~~g~~~p~~-~~~~~gvdsis~~~hK~~~-~p~g~g~ll~~~----~~~~~~~~~~~~~~~~~~~~~~ 383 (541)
++|+.+... . ...+++ .+...+-.++..++.|... .+..+|+++..+ +.+............ .
T Consensus 211 e~Y~~l~~~--~---~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~------~ 279 (433)
T PRK06855 211 EIYNNIVYN--G---KKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKM------I 279 (433)
T ss_pred ccccccccC--C---CCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhc------c
Confidence 999876531 1 001111 1111122366778899953 566699988742 111110000000000 0
Q ss_pred cccCCCCCchHHHHHHHHHHHh----HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC--------
Q 009181 384 TVAGSRPGGLIAGAWAALMSLG----QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV-------- 451 (541)
Q Consensus 384 ~~~gsr~~~~~a~~~~al~~lg----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~-------- 451 (541)
... .....+.++...+. ...+++..+.+.++++.+.+.|++++++.+..+....++++++++.
T Consensus 280 ~~~-----~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~ 354 (433)
T PRK06855 280 EVC-----STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSL 354 (433)
T ss_pred ccC-----CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeeccccccccccccC
Confidence 000 01235666655553 2456677777888889999999888787655333345556665431
Q ss_pred --------------------CHHHHH-HHHHhCCceecc---CC-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 452 --------------------DIFEVN-DIMSSKGWHLNP---LQ-RPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 452 --------------------~~~~l~-~~l~~~G~~~~~---~~-~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
+..++. ..+.+.|+.+.. ++ ...++|+|++..+.+++++.+++|++++++.
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 355 PIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred CcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHHHHHHH
Confidence 133444 345677865432 22 1246999999766799999999999998753
No 171
>PLN02231 alanine transaminase
Probab=99.87 E-value=3.8e-19 Score=191.32 Aligned_cols=312 Identities=12% Similarity=0.153 Sum_probs=212.9
Q ss_pred CCCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc
Q 009181 160 PLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (541)
Q Consensus 160 ~~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~ 237 (541)
..+|..+.|...+.+.+.+++.+..|.+ +++ | ++|+|+++++.+++.++.. .+| ++|+++.+.|+
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~----I--~iT~Ga~~ai~~~~~~l~~----~~g---d~Vli~~P~Y~ 227 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDGFPADPND----I--FLTDGASPAVHMMMQLLIR----SEK---DGILCPIPQYP 227 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccCCCCCccc----E--EEeCCHHHHHHHHHHHhcc----CCC---CEEEEeCCCCh
Confidence 3557778888889888888888876754 443 7 8999999999999998852 146 89999999999
Q ss_pred hHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhcc------CceEEEeecCCCCCccccC---HHHHHHHHHHcCCEE
Q 009181 238 AYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCL 306 (541)
Q Consensus 238 s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~l 306 (541)
.+..+++..|++++.+++++ +|.+|+++|++++++ +++++++++|+||||.+.+ +++|.++|++||++|
T Consensus 228 ~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~l 307 (534)
T PLN02231 228 LYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVL 307 (534)
T ss_pred hHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 99999999999999999975 479999999999975 6889999999999999976 678999999999999
Q ss_pred EEeCCcccchhhhhhhcCCCCCCC---C----cCCCCceEE-EeCCCCCCC--CCCCceEEEEe--cccccccccccccc
Q 009181 307 HVDLCLGGFVLPFAKKLGYPIPPF---D----FSVQGVTSI-SVDVHKYGL--APKGTSVVLYR--NREIRKHQFVAVTE 374 (541)
Q Consensus 307 hvD~a~gg~~~~f~~~~g~~~p~~---~----~~~~gvdsi-s~~~hK~~~--~p~g~g~ll~~--~~~~~~~~~~~~~~ 374 (541)
++|++|+.+... . +...+.+ . ....++..+ ..++.|..+ ++..+|++... ++++.........
T Consensus 308 I~DEvY~~l~y~--~--~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~- 382 (534)
T PLN02231 308 LADEVYQENVYV--P--DKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVAS- 382 (534)
T ss_pred EEEccchhcccC--C--CCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHh-
Confidence 999999876541 0 0000011 0 001123334 447889534 56679998764 4444433221110
Q ss_pred cCCCccCCCcccCCCCCchHHHHHHHHHHHh-----HHHH-------HHHHHHHHHHHHHHHHHhhcCCCeEEecCCCee
Q 009181 375 WSGGLYVSPTVAGSRPGGLIAGAWAALMSLG-----QEGY-------LENTKAIMEVSESIQKGIKEIPELFIIGRPDMT 442 (541)
Q Consensus 375 ~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg-----~~g~-------~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~ 442 (541)
...+.+ ..++.++...+. ...| .++.+.+.++++.+.+.|++++++++. +|+++
T Consensus 383 --------~~~~s~-----~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~-~p~Gg 448 (534)
T PLN02231 383 --------VNLCSN-----ISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCN-KAEGA 448 (534)
T ss_pred --------hhcCCC-----hHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-CCCee
Confidence 011111 123333333231 1222 344667888899999999998898865 56666
Q ss_pred EEEE-ec--CCC-----------CHHHHHHHHH-hCCceecc---CCC---CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 443 IVAF-GS--DVV-----------DIFEVNDIMS-SKGWHLNP---LQR---PNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 443 ~v~f-~~--~~~-----------~~~~l~~~l~-~~G~~~~~---~~~---~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
++.| +. +.. +...++..|. +.|+.+.. ++. ..++|+++. ...+++++.+++|+++.++
T Consensus 449 fylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~-~~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 449 MYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred eEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC-CCHHHHHHHHHHHHHHHHH
Confidence 6655 32 211 1223455455 56876532 221 236999985 3558999999999999888
Q ss_pred HHc
Q 009181 502 VKQ 504 (541)
Q Consensus 502 l~~ 504 (541)
+++
T Consensus 528 ~~~ 530 (534)
T PLN02231 528 FMD 530 (534)
T ss_pred HHH
Confidence 764
No 172
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.87 E-value=2.1e-20 Score=192.76 Aligned_cols=301 Identities=14% Similarity=0.069 Sum_probs=208.1
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEc-CcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHH
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMT-SGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAA 243 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t-~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~ 243 (541)
.+...++..++++.+++++|.+++. ++ +++ ++||.++..++..+.. + +.+++....|.+ +.+.+
T Consensus 36 ~~~f~~~~~~~r~~l~~l~~~~~~~---~v--~f~~gs~T~a~~~~~~~l~~----~-----~~l~i~~G~~~~~~~~~a 101 (361)
T TIGR01366 36 QAPVKNLVGRVREGLAELFSLPDGY---EV--ILGNGGATAFWDAATFGLIE----K-----KSLHLSFGEFSSKFAKAV 101 (361)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCCCc---eE--EEECCchhHHHHHHHHhccc----c-----cccEEecCHHHHHHHHHH
Confidence 4566778888999999999996543 24 665 6699999999988741 1 234455555554 45555
Q ss_pred hhc--CCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 244 QYF--NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 244 ~~~--G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
+.. +.+++.++.+++..++ ..+++++++|++++.+|.+|++.|+++| ++++|++++||++++.+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~---- 169 (361)
T TIGR01366 102 KLAPWLGEPIIVTADPGSAPE-----PQADPGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGL---- 169 (361)
T ss_pred HhhhccCCceEEecCCCCCCC-----CccCCCCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCC----
Confidence 542 2377777776543333 3467889999999999999999999988 5889999999999764443
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccc-c-------ccccCCCc--cCCCcccCCCCC
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFV-A-------VTEWSGGL--YVSPTVAGSRPG 391 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~-~-------~~~~~~~~--~~~~~~~gsr~~ 391 (541)
++|+. .+|++.+++||++.+|.|.++++++++.+.+..-. . ..+|.... .......++.+-
T Consensus 170 -------~idv~--~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i 240 (361)
T TIGR01366 170 -------PVDIA--ETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAI 240 (361)
T ss_pred -------CCCHH--HCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchH
Confidence 34444 38999999999976666777666666543221100 0 00000000 000111233333
Q ss_pred chHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC------eeEEEEecCCCCHHHHHHHHHhCC
Q 009181 392 GLIAGAWAALMSLGQE-GYLENTKAIMEVSESIQKGIKEIPELFIIGRPD------MTIVAFGSDVVDIFEVNDIMSSKG 464 (541)
Q Consensus 392 ~~~a~~~~al~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~------~~~v~f~~~~~~~~~l~~~l~~~G 464 (541)
..++++..+++++..+ |++.+.++..++++++++.+.+++.++++.... ...+.| ..+.+..++.+.|.++|
T Consensus 241 ~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~-~~g~~~~~v~~~L~~~g 319 (361)
T TIGR01366 241 ATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDF-VDDIDAATVAKILRANG 319 (361)
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEEC-CCccCHHHHHHHHHHCC
Confidence 4466888999999877 699999999999999999999997677664211 144555 34568889999999999
Q ss_pred ceeccCC---CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 465 WHLNPLQ---RPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 465 ~~~~~~~---~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
+.+.... .++.+|++...+++ +|+++++++|+++++++
T Consensus 320 I~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 320 IVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred CeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 7764321 13579999988887 99999999999987653
No 173
>PRK05968 hypothetical protein; Provisional
Probab=99.87 E-value=3e-20 Score=193.38 Aligned_cols=275 Identities=18% Similarity=0.172 Sum_probs=196.2
Q ss_pred HHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HHHHHhhcCCeEE
Q 009181 176 VIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDKAAQYFNIKLW 251 (541)
Q Consensus 176 v~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~ka~~~~G~~v~ 251 (541)
+++.+++++|.+.. +++++|+.|+.+++.+.. ++| ++|+++.+.|.+ +...+...|++++
T Consensus 68 le~~lA~l~g~~~a--------v~~~sG~~Ai~~al~al~-----~~G---d~Vl~~~~~y~~t~~~~~~~~~~~G~~v~ 131 (389)
T PRK05968 68 FEEMLAKLEGAEDA--------RGFASGMAAISSTVLSFV-----EPG---DRIVAVRHVYPDAFRLFETILKRMGVEVD 131 (389)
T ss_pred HHHHHHHHhCCCcE--------EEECCHHHHHHHHHHHHh-----CCC---CEEEEeCCCchHHHHHHHHHHHHcCceEE
Confidence 44588999998642 566777889988887754 267 999999998886 3456777899999
Q ss_pred EeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 252 RVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
.++.+ |++++++++ ++|++|++++|+++++.+.|+++|+++|++||+++++|++++.+... - +
T Consensus 132 ~vd~~-----d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~--------~-p-- 194 (389)
T PRK05968 132 YVDGR-----DEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQ--------R-P-- 194 (389)
T ss_pred EeCCC-----CHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhcc--------C-c--
Confidence 98764 899999998 67899999999999999999999999999999999999998755321 1 1
Q ss_pred cCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHH
Q 009181 332 FSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGY 409 (541)
Q Consensus 332 ~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~ 409 (541)
...|+|++..+++|++.+|.+ .|+ ++.++++..........|.++. .. ...+|..+ .+.+.+
T Consensus 195 -~~~g~Divv~S~tK~l~g~~~~~gG~-i~~~~~~~~~l~~~~~~~~g~~----------~~--~~~A~~~l--~~L~tl 258 (389)
T PRK05968 195 -ITLGVDLVIHSASKYLGGHSDTVAGV-VAGSKEHIARINAEAYPYLGAK----------LS--PFEAWLLL--RGLRTL 258 (389)
T ss_pred -hhcCCcEEEeeccccccCCCCeEEEE-EEECHHHHHHHHHHHHHhCCCC----------CC--hHHHHHHH--cccCcH
Confidence 235789999999999766654 565 4555554332221111222211 11 12455554 344567
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEecCCC------------eeEEEEecCC-CCHHHHHHHHHhCCce------ec--
Q 009181 410 LENTKAIMEVSESIQKGIKEIPELFIIGRPD------------MTIVAFGSDV-VDIFEVNDIMSSKGWH------LN-- 468 (541)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~------------~~~v~f~~~~-~~~~~l~~~l~~~G~~------~~-- 468 (541)
..+.++..++++++.+.|+++|+++.+..|. .++++|.+++ .+..++.+.|...++. .+
T Consensus 259 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv 338 (389)
T PRK05968 259 PLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLV 338 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCcee
Confidence 8889999999999999999999987665431 4699999863 3456677777654310 00
Q ss_pred -----------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 469 -----------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 469 -----------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
..+. ++.+|+|++. |+.+.++++|+++++..
T Consensus 339 ~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl---E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 339 VPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL---EGTEALWADLEQALAAA 387 (389)
T ss_pred eeCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHHh
Confidence 1111 3689999998 55677888888887654
No 174
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.87 E-value=8.6e-21 Score=185.81 Aligned_cols=293 Identities=17% Similarity=0.219 Sum_probs=206.3
Q ss_pred cccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHH-
Q 009181 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK- 241 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~k- 241 (541)
|...|.+.++|. .+++++|. .. + .|+++||+||.+++.+... +| ..||+...+|.....
T Consensus 31 YG~D~~~~~~e~----~~ae~~g~-~a-----~--~Fv~sGT~aN~lal~~~~~-----~~---~~vi~~~~aHi~~~E~ 90 (342)
T COG2008 31 YGEDPTTNALEQ----RIAELFGK-EA-----A--LFVPSGTQANQLALAAHCQ-----PG---ESVICHETAHIYTDEC 90 (342)
T ss_pred CCCCHHHHHHHH----HHHHHhCC-ce-----E--EEecCccHHHHHHHHHhcC-----CC---CeEEEeccccceeccc
Confidence 444455555555 99999998 32 3 8999999999999999873 66 789999999988665
Q ss_pred -HHhhcC-CeEEEeeCCCCCccCHHHHHHhhccC-------ceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEe
Q 009181 242 -AAQYFN-IKLWRVPVDKEFRADVKAIKKYINRN-------TVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVD 309 (541)
Q Consensus 242 -a~~~~G-~~v~~v~~~~~~~~d~~~Le~~i~~~-------t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD 309 (541)
+.+.++ +....+.-.++|.+++++++++|..+ +.++..+..+ ..|++.| |++|.++||++|++||+|
T Consensus 91 Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~~~~k~~~l~LHmD 169 (342)
T COG2008 91 GAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAISAVCKEHGLPLHMD 169 (342)
T ss_pred CcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHHHHHHHhCCceeec
Confidence 345554 44444444569999999999988742 4455555554 7899987 567889999999999999
Q ss_pred CCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCC
Q 009181 310 LCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSR 389 (541)
Q Consensus 310 ~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr 389 (541)
+|-=..+++ .+| |+..--..++|++++.+.|.|..|.|. +++.+.++.+...+.... .|+. -|
T Consensus 170 GAR~~nA~v---alg---~~~~~~~~~~D~v~~~~tK~g~~~~gA--iv~gn~~~~~~a~~~rK~-~Ggl--------~~ 232 (342)
T COG2008 170 GARLANALV---ALG---VALKTIKSYVDSVSFCLTKGGGAPVGA--IVFGNRDFAKRARRWRKR-AGGL--------MR 232 (342)
T ss_pred hHHHHHHHH---HcC---CCHHHHHhhCCEEEEecccCCcceeee--EEEcCHHHHHHHHHHHHH-hccc--------Hh
Confidence 996444432 222 122233567899999999997665543 677676654432211111 1221 23
Q ss_pred CCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceecc
Q 009181 390 PGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP 469 (541)
Q Consensus 390 ~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~ 469 (541)
-...++++|... +..+-+....++..++|++|++.+.+.||+++..+++.++|.++.++.. .+.+...||....
T Consensus 233 k~r~laA~~~~~--l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~----i~~l~~~~~~~~~ 306 (342)
T COG2008 233 KARFLAAQGLYA--LEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESA----IEALRLAGALFYR 306 (342)
T ss_pred hhhHHHHHHHHH--HhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHH----HHHHHhhchhhee
Confidence 333466777665 6666688888888999999999999889999999999999999887521 2555666654332
Q ss_pred --CCCC--CeEEEEecCCCH-HHHHHHHHHHHHHH
Q 009181 470 --LQRP--NSIHICVTLQHV-AVVDVFLRDLRESV 499 (541)
Q Consensus 470 --~~~~--~~iRi~~~~~~~-e~id~~i~~L~~~~ 499 (541)
+..+ ..+|++.+..++ +|+++++..++++.
T Consensus 307 ~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 307 GVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred eeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 2112 369999988776 99999999998764
No 175
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.87 E-value=8.9e-20 Score=190.28 Aligned_cols=278 Identities=17% Similarity=0.173 Sum_probs=191.1
Q ss_pred HHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHH----HHhhcCCeEE
Q 009181 176 VIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK----AAQYFNIKLW 251 (541)
Q Consensus 176 v~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~k----a~~~~G~~v~ 251 (541)
+++.+++++|.+.. .++++|+.|+..++.+.. ++| ++|+++.+.|.+... .+..+|++++
T Consensus 70 Le~~lA~l~G~~~~--------~~~~sG~~Ai~~~l~~~l-----~~G---d~Vl~~~~~y~~~~~~~~~~~~~~G~~v~ 133 (398)
T PRK07504 70 FEKRMCALEGAEDA--------RATASGMAAVTAAILCQV-----KAG---DHVVAARALFGSCRYVVETLLPRYGIEST 133 (398)
T ss_pred HHHHHHHHhCCCee--------eEecCHHHHHHHHHHHHh-----CCC---CEEEEcCCchhHHHHHHHHHHhhcCeEEE
Confidence 44588899998754 457788999987776654 266 899999998887543 3456799988
Q ss_pred EeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 252 RVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
.++. +|+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+... . +
T Consensus 134 ~vd~-----~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~--------~-~-- 197 (398)
T PRK07504 134 LVDG-----LDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQ--------K-P-- 197 (398)
T ss_pred EECC-----CCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccC--------C-c--
Confidence 8862 6999999999999999999999999999999999999999999999999998754321 1 1
Q ss_pred cCCCCceEEEeCCCCCCCCCC-CceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHH
Q 009181 332 FSVQGVTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYL 410 (541)
Q Consensus 332 ~~~~gvdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~ 410 (541)
...|+|+++.++||++.++. ..|.+++.+++........... ..|.... ...+|.+++ +.+.+.
T Consensus 198 -~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~----------~~g~~~s--~~~A~~~l~--~L~tl~ 262 (398)
T PRK07504 198 -LELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFR----------HTGPSLS--PFNAWTLLK--GLETLP 262 (398)
T ss_pred -hhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHH----------HhCCCCC--HHHHHHHHh--ccchHH
Confidence 23478999999999954432 2444455555433221110000 0122222 225666663 556678
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEe-cC-----CC-----------eeEEEEecCCC--CHHHHHHHHHh--CCce---
Q 009181 411 ENTKAIMEVSESIQKGIKEIPELFII-GR-----PD-----------MTIVAFGSDVV--DIFEVNDIMSS--KGWH--- 466 (541)
Q Consensus 411 ~~~~~~~~~a~~l~~~L~~~~~~~v~-~~-----~~-----------~~~v~f~~~~~--~~~~l~~~l~~--~G~~--- 466 (541)
.+.++..++++.+.+.|++.|++.-+ .| |. .++++|.+++. ...++.+.|.- .+..
T Consensus 263 ~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~~~~~~~slG~ 342 (398)
T PRK07504 263 VRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALKIVRISNNLGD 342 (398)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCCcceecccCCC
Confidence 88999999999999999998887532 22 11 56999998642 12233333321 1100
Q ss_pred ---e-------c----------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 467 ---L-------N----------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 467 ---~-------~----------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
+ . ..+. ++.+|+|++. |+.+.++++|+++++..+
T Consensus 343 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~~ 397 (398)
T PRK07504 343 AKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGL---EDTDDLIEDLAAALKKVR 397 (398)
T ss_pred CCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhhh
Confidence 0 0 0111 2579999998 678888899999887543
No 176
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.87 E-value=9e-20 Score=193.24 Aligned_cols=312 Identities=12% Similarity=0.058 Sum_probs=211.3
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCcc-ceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecC---Cccc---hH
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQV-CGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPV---SAHS---AY 239 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v-~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~---~~h~---s~ 239 (541)
....++|..+++...++|+..... + +.+-.++|+.||..++.++.. +| ++|+..+ ..|. +.
T Consensus 76 ~~~d~lE~~~~~~~~~~f~~~~~~----~~~nv~~~SG~~AN~av~~aL~~-----pg---D~Il~~d~~~gGhl~H~~~ 143 (475)
T PLN03226 76 EYIDQIETLCQKRALEAFRLDPEK----WGVNVQPLSGSPANFAVYTALLQ-----PH---DRIMGLDLPHGGHLSHGYQ 143 (475)
T ss_pred hhHHHHHHHHHHHHHHHhCCCcce----eEEecCcCchHHHHHHHHHHhCC-----CC---CEEEECCCCcCcchhhhhh
Confidence 356788888888899999988764 2 001247889999999999864 67 8998743 3343 33
Q ss_pred HHHHhhcCCe--EE--EeeCC-CCCccCHHHHHHhhcc-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcc
Q 009181 240 DKAAQYFNIK--LW--RVPVD-KEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 240 ~ka~~~~G~~--v~--~v~~~-~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~g 313 (541)
...++..+.. +. ..+++ +++.+|+++|++++.+ ++++|++.. +.+|..-|+++|.++|+++|++++||++++
T Consensus 144 ~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~~--S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~ 221 (475)
T PLN03226 144 TDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAGA--SAYPRDWDYARMRKIADKVGALLMCDMAHI 221 (475)
T ss_pred hcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEec--CcCCCccCHHHHHHHHHHcCCEEEEEchhh
Confidence 3333333332 22 33444 4789999999999874 677665533 237888999999999999999999999998
Q ss_pred cchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEeccccccccccccc---cc--CCCccCCCcccCC
Q 009181 314 GFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVT---EW--SGGLYVSPTVAGS 388 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~gs 388 (541)
.++++. -+.+. + ..++|++++++|||+.||.| |++++++. .......... +| .-.....+...|+
T Consensus 222 ~Gli~~---~~~~~-p----~~~~Div~~t~hK~L~GP~G-g~I~~~~~-~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~ 291 (475)
T PLN03226 222 SGLVAA---QEAAS-P----FEYCDVVTTTTHKSLRGPRG-GMIFFRKG-PKPPKGQGEGAVYDYEDKINFAVFPGLQGG 291 (475)
T ss_pred hCcccC---CCCCC-C----CCCCeEEEecCcccccCCCc-eEEEEchh-hcccccCCCccHHHHHHHhccccCCccCCC
Confidence 776631 11111 1 23799999999999889998 76777543 2211000000 00 0000011122334
Q ss_pred CCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC-CCeeEEEEec--CCCCHHHHHHHHHhCCc
Q 009181 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR-PDMTIVAFGS--DVVDIFEVNDIMSSKGW 465 (541)
Q Consensus 389 r~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~f~~--~~~~~~~l~~~l~~~G~ 465 (541)
..-..++++.++++.+...+++++.++..+++++|++.|++. |++++.+ .+.+++.+.+ .+.+..++.+.|.+.|+
T Consensus 292 p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I 370 (475)
T PLN03226 292 PHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHI 370 (475)
T ss_pred chHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCC
Confidence 344557788888988877788899999999999999999985 9999864 2345555554 34577789999999998
Q ss_pred eeccCC--------CCCeEEEEecCCC-----HHHHHHHHHHHHHHHHHHH
Q 009181 466 HLNPLQ--------RPNSIHICVTLQH-----VAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 466 ~~~~~~--------~~~~iRi~~~~~~-----~e~id~~i~~L~~~~~~l~ 503 (541)
.++.-. .|+.+|+.....+ .+|++++.+.|.++++...
T Consensus 371 ~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~~~ 421 (475)
T PLN03226 371 TLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTIAL 421 (475)
T ss_pred EECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHHhh
Confidence 765421 3467998544333 3889999999999987543
No 177
>PLN02271 serine hydroxymethyltransferase
Probab=99.87 E-value=1.1e-19 Score=189.86 Aligned_cols=312 Identities=12% Similarity=0.104 Sum_probs=224.7
Q ss_pred cchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc---hHH-
Q 009181 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS---AYD- 240 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~---s~~- 240 (541)
....+.++|..+++...++||++..+-| +-+-..+|+.|+..++.++.+ +| |+|+..+..|. +..
T Consensus 188 G~~~iD~iE~la~era~~lF~~~~~~~g---aNVQp~SGs~AN~aV~~ALl~-----PG---D~IL~ldl~~GGHlshg~ 256 (586)
T PLN02271 188 GNQYIDQIERLCCERALAAFGLDSEKWG---VNVQPYSCTSANFAVYTGLLL-----PG---DRIMGLDSPSGGHMSHGY 256 (586)
T ss_pred CChhHHHHHHHHHHHHHHHhCCcccccc---cceeeccHHHHHHHHHHHhcC-----CC---CEEEEecCCCCCchhccc
Confidence 3455778999999999999998863200 114455899999999988853 77 99988666544 332
Q ss_pred -----HHHhhcCCeEEEee--CC-CCCccCHHHHHH-hhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCC
Q 009181 241 -----KAAQYFNIKLWRVP--VD-KEFRADVKAIKK-YINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 241 -----ka~~~~G~~v~~v~--~~-~~~~~d~~~Le~-~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a 311 (541)
+.+...|+.+..+| ++ +++.+|.++|++ +...+|++|++.+..++ ...|+++|.++|+++|++|++|++
T Consensus 257 ~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~A 334 (586)
T PLN02271 257 YTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMA 334 (586)
T ss_pred ccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECc
Confidence 23455676666666 65 489999999998 77889999999888877 778999999999999999999999
Q ss_pred cccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCc-----------c
Q 009181 312 LGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGL-----------Y 380 (541)
Q Consensus 312 ~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~-----------~ 380 (541)
+..++++ .|. +..-..++|++++++|||+.||.| |+++++++ ...........|.+.. -
T Consensus 335 H~aGLIa----~g~----~~sP~~~aDvvt~TTHKtLrGPrG-G~I~~r~~-~~~~~~g~~gs~s~~~~~~d~~~kI~~a 404 (586)
T PLN02271 335 HISGLVA----AKE----CVNPFDYCDIVTSTTHKSLRGPRG-GIIFYRKG-PKLRKQGMLLSHGDDNSHYDFEEKINFA 404 (586)
T ss_pred ccccccc----cCc----CCCCCcCCcEEEeCCcccCCCCCc-eEEEeccc-ccccccCCccccccccccHHHHHHhhcc
Confidence 9777664 111 111234689999999999999999 77788643 1111111111111110 0
Q ss_pred CCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC-CCeeEEEEecCCC--CHHHHH
Q 009181 381 VSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR-PDMTIVAFGSDVV--DIFEVN 457 (541)
Q Consensus 381 ~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~f~~~~~--~~~~l~ 457 (541)
.-|.+.|+.-...+++...+++......|++..+++.++++.|++.|.+. |++++.. .+.+.+.+...+. +.....
T Consensus 405 VfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnHlvLvDl~~~g~~G~~ae 483 (586)
T PLN02271 405 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDNHLLLWDLTTLGLTGKNYE 483 (586)
T ss_pred cCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcceeeecCcccCCCHHHHH
Confidence 12344454444558888889887777788999999999999999999987 9998753 4567777776543 677888
Q ss_pred HHHHhCCceeccCC--------CCCeEEEEecCCCH-----HHHHHHHHHHHHHHH
Q 009181 458 DIMSSKGWHLNPLQ--------RPNSIHICVTLQHV-----AVVDVFLRDLRESVE 500 (541)
Q Consensus 458 ~~l~~~G~~~~~~~--------~~~~iRi~~~~~~~-----e~id~~i~~L~~~~~ 500 (541)
+.|.+.|+.++... .|+.+||.....++ +|++++.+.|.++++
T Consensus 484 ~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 484 KVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred HHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 88888887765421 24679998776664 788888888888776
No 178
>PRK07908 hypothetical protein; Provisional
Probab=99.87 E-value=8.7e-20 Score=187.95 Aligned_cols=278 Identities=17% Similarity=0.182 Sum_probs=194.9
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++.+|.++++ + ++|+|+++++.++++ +. + +.+++..+++..+...++..|++++.+|
T Consensus 62 ~lr~aia~~~~~~~~~----I--~it~Ga~~al~~~~~-l~------~----~~viv~~P~y~~~~~~~~~~G~~i~~v~ 124 (349)
T PRK07908 62 RARAAVAARHGRTPDE----V--LLLAGAAEGFALLAR-LR------P----RRAAVVHPSFTEPEAALRAAGIPVHRVV 124 (349)
T ss_pred HHHHHHHHHhCcChhh----E--EECCCHHHHHHHHHh-cC------C----CeEEEeCCCChHHHHHHHHcCCEEEeec
Confidence 3566788888988776 7 899999999988776 21 2 3567778889888899999999999999
Q ss_pred CCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCC
Q 009181 255 VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSV 334 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~ 334 (541)
+++++.+|++++ +++++++++++|+||||.+.+.++|.++|++ +.++++|++|+.+.. . . .+.+.-..
T Consensus 125 ~~~~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~---~---~-~~~l~~~~ 192 (349)
T PRK07908 125 LDPPFRLDPAAV----PDDADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVP---G---E-PESLAGDD 192 (349)
T ss_pred cCcccCcChhHh----ccCCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhcc---C---C-cccccccc
Confidence 987788998855 4578899999999999999999999999964 889999999976531 1 1 11111111
Q ss_pred CCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCch-HHHHHHHHHHHhHHHHHHH
Q 009181 335 QGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGL-IAGAWAALMSLGQEGYLEN 412 (541)
Q Consensus 335 ~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~-~a~~~~al~~lg~~g~~~~ 412 (541)
.+-.++..+++|.. ..+..+|+++.+ +++..........|..+ .. .+++...+...+...+++.
T Consensus 193 ~~~~i~i~S~SK~~~l~GlRiG~~~~~-~~~~~~~~~~~~~~~~~-------------~~~~~a~~~~~~~~~~~~~~~~ 258 (349)
T PRK07908 193 LPGVLVLRSLTKTWSLAGLRVGYALGA-PDVLARLTRGRAHWPVG-------------TLQLEAIAACCAPRAVAEAAAD 258 (349)
T ss_pred CCCEEEEeecccccCCccceeeeeecC-HHHHHHHHhcCCCCCcc-------------HHHHHHHHHHhcccchHHHHHH
Confidence 11134445889973 245557987754 44433221111122111 11 1111111111123456778
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceecc---C-C-CCCeEEEEecCCCHHH
Q 009181 413 TKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP---L-Q-RPNSIHICVTLQHVAV 487 (541)
Q Consensus 413 ~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~---~-~-~~~~iRi~~~~~~~e~ 487 (541)
.++..++++++.+.|+++ ++++..++...++++..++ ..++.+.|.++|+.+.. + + .++++|+|++ +.++
T Consensus 259 ~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~~~--~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~ 333 (349)
T PRK07908 259 AARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRVPD--AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR--PRAE 333 (349)
T ss_pred HHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEECCc--HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC--CCcc
Confidence 888889999999999988 8888776778888888764 56888899999976643 2 1 2579999996 3489
Q ss_pred HHHHHHHHHHHHH
Q 009181 488 VDVFLRDLRESVE 500 (541)
Q Consensus 488 id~~i~~L~~~~~ 500 (541)
+++++++|++++.
T Consensus 334 ~~~l~~al~~~~~ 346 (349)
T PRK07908 334 VPVLVQALAEILK 346 (349)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988754
No 179
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=8.1e-20 Score=190.33 Aligned_cols=286 Identities=15% Similarity=0.137 Sum_probs=197.9
Q ss_pred ccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH---
Q 009181 164 DIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD--- 240 (541)
Q Consensus 164 ~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~--- 240 (541)
...|...++|+ .++++.|.+. . +++++|++|+..++.++.. +| ++|+++.+.|.+..
T Consensus 61 ~~~p~~~~le~----~lA~l~g~~~------~--i~~ssG~~Ai~~~l~all~-----~G---D~Vi~~~~~y~~~~~~~ 120 (398)
T PRK08249 61 NTNPTVQAFEE----KVRILEGAEA------A--TAFSTGMAAISNTLYTFLK-----PG---DRVVSIKDTYGGTNKIF 120 (398)
T ss_pred CCChHHHHHHH----HHHHHhCCCe------E--EEeCChHHHHHHHHHHhcC-----CC---CEEEEcCCchHHHHHHH
Confidence 33455555555 8899998753 2 6778889999999887643 66 89999999998754
Q ss_pred -HHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhh
Q 009181 241 -KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPF 319 (541)
Q Consensus 241 -ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f 319 (541)
..+..+|++++.++. .|+++++++|+++|++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.+..
T Consensus 121 ~~~~~~~Gi~v~~vd~-----~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~-- 193 (398)
T PRK08249 121 TEFLPRMGVDVTLCET-----GDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPIN-- 193 (398)
T ss_pred HHHHhhCCeEEEEcCC-----CCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCcccc--
Confidence 345677999887764 489999999999999999999999999999999999999999999999999975432
Q ss_pred hhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC-ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHH
Q 009181 320 AKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG-TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAW 398 (541)
Q Consensus 320 ~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g-~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~ 398 (541)
..+ ...++|++..+++|++.++.. .|.+++.++++......... ..|.... ...+|
T Consensus 194 -------~~~---l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~-----------~~g~~~s--~~~a~ 250 (398)
T PRK08249 194 -------QNP---LALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYRE-----------INGATMD--PMSAY 250 (398)
T ss_pred -------CCc---hhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHH-----------hcCCCCC--HHHHH
Confidence 011 235789999999999544332 33345556554432211111 0122222 23566
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCC--CHHHHHHH
Q 009181 399 AALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVV--DIFEVNDI 459 (541)
Q Consensus 399 ~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~--~~~~l~~~ 459 (541)
.+++ +.+.+....++..++++.+.+.|++.|.++-+.-| .+++++|.+++. ...++.+.
T Consensus 251 l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~ 328 (398)
T PRK08249 251 LILR--GMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPK 328 (398)
T ss_pred HHHh--CcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHh
Confidence 6664 55667888899999999999999998877643222 146899988642 12334343
Q ss_pred HHh--CCce-------e------cc----------CCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHc
Q 009181 460 MSS--KGWH-------L------NP----------LQR-PNSIHICVTLQHVAVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 460 l~~--~G~~-------~------~~----------~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~~ 504 (541)
|.- .+.. + .. .+. ++.+|+|++. |+.+.++++|+++++.+..
T Consensus 329 l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~~~ 396 (398)
T PRK08249 329 LRYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGI---EDTEDLIADLEQAFAHLES 396 (398)
T ss_pred CCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHHhhh
Confidence 321 1210 0 00 111 2579999998 7788899999999876553
No 180
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.87 E-value=1.3e-19 Score=190.36 Aligned_cols=294 Identities=14% Similarity=0.110 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeE
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKL 250 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v 250 (541)
....++.+.+++++|.+. . +++++|++|+..++.++... .+| +.|+.+...|.++..+++..|.++
T Consensus 90 ~~~~~le~~la~~~g~~~------~--~~~~SG~~An~~ai~~l~~~---~~g---~~I~~~~~~H~s~~~~~~~~g~~~ 155 (406)
T PRK13393 90 HYHVLLEAELADLHGKEA------A--LLFTSGYVSNWAALSTLGSR---LPG---CVILSDELNHASMIEGIRHSRAEK 155 (406)
T ss_pred HHHHHHHHHHHHHhCCCc------E--EEeCCcHHHHHHHHHHhhcC---CCC---CEEEEccchhHHHHHHHHHcCCeE
Confidence 345667779999998642 2 56566678999999865321 134 678888899999999999899988
Q ss_pred EEeeCCCCCccCHHHHHHhhc----cCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCC
Q 009181 251 WRVPVDKEFRADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYP 326 (541)
Q Consensus 251 ~~v~~~~~~~~d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~ 326 (541)
+.++.. |++++++.++ +++++|+++++++++|.+.|+++|.++|++||+++++|++++.+++ ...|..
T Consensus 156 ~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~---g~~G~g 227 (406)
T PRK13393 156 RIFRHN-----DPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLY---GPRGGG 227 (406)
T ss_pred EEeCCC-----CHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCcccccc---CCCCCc
Confidence 888764 7777777764 3578999999999999999999999999999999999999973332 111210
Q ss_pred -CCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh
Q 009181 327 -IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG 405 (541)
Q Consensus 327 -~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg 405 (541)
....+ ....+|++..++.|. ++..| |+++ .++++..........|. ..++.+....++..++++.+.
T Consensus 228 ~~~~~~-~~~~~~i~~~tlsKa-~g~~G-G~~~-~~~~~~~~l~~~~~~~~--------~t~~~~p~~~aa~~aaL~~~~ 295 (406)
T PRK13393 228 IAEREG-LADRLTIIEGTLAKA-FGVMG-GYIT-GSAALCDFIRSFASGFI--------FTTSLPPAVAAGALASVRHLK 295 (406)
T ss_pred hhhhcC-CCCCCeEEEEeCchh-hcccC-ceee-CCHHHHHHHHHhCcCce--------ecCccCHHHHHHHHHHHHHHh
Confidence 00111 123468887788899 55544 6544 44443322111111110 111222222445666776553
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-CHHHHHHHHHh-CCceeccCCC------CCeEE
Q 009181 406 QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV-DIFEVNDIMSS-KGWHLNPLQR------PNSIH 477 (541)
Q Consensus 406 ~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~-~~~~l~~~l~~-~G~~~~~~~~------~~~iR 477 (541)
..+ ...++..++++++.+.|++. +++++ ++..+++.+...+. +..++.+.|.+ +|+.+..... .+.+|
T Consensus 296 ~~~--~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iR 371 (406)
T PRK13393 296 ASS--AERERHQDRVARLRARLDKA-GIPHL-PNPSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLR 371 (406)
T ss_pred hCH--HHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEE
Confidence 332 22356678899999999886 67655 34556666655332 45678888887 5987654321 25799
Q ss_pred EEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 478 ICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 478 i~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
++++..++ +|+|++++.|+++++++
T Consensus 372 is~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 372 ITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 99998877 99999999999988654
No 181
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=1.1e-19 Score=188.67 Aligned_cols=282 Identities=16% Similarity=0.129 Sum_probs=197.2
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH----
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA---- 242 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka---- 242 (541)
|....+|+ .++++.|.+ . + ++++||++|+..++.++.. +| ++|+++.+.|++....
T Consensus 52 pt~~~L~~----~lA~l~g~~--~----~--i~~~sg~~Ai~~~l~~l~~-----~G---D~Vl~~~~~y~~~~~~~~~~ 111 (386)
T PRK08045 52 PTRDVVQR----ALAELEGGA--G----A--VLTNTGMSAIHLVTTVFLK-----PG---DLLVAPHDCYGGSYRLFDSL 111 (386)
T ss_pred ccHHHHHH----HHHHHhCCC--e----E--EEECCHHHHHHHHHHHHcC-----CC---CEEEEcCCCcHHHHHHHHHH
Confidence 44444444 888888853 2 3 8999999999999987653 66 8999999999864332
Q ss_pred HhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 243 AQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 243 ~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
+...|+++..++ ..|+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+..+
T Consensus 112 ~~~~gi~v~~vd-----~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~---- 182 (386)
T PRK08045 112 AKRGCYRVLFVD-----QGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ---- 182 (386)
T ss_pred HhhCCeEEEEeC-----CCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC----
Confidence 233455776664 25899999999999999999999999999999999999999999999999999765331
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHH
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~a 400 (541)
. + ...|+|++..++|||+.|+.+ .|+++.+++++....... ....+. - .....+|.+
T Consensus 183 ----~-p---l~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~-~~~~g~----------~--~~p~~~~l~ 241 (386)
T PRK08045 183 ----N-P---LALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWW-ANNIGV----------T--GGAFDSYLL 241 (386)
T ss_pred ----C-c---hhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHH-HHhcCC----------C--CCHHHHHHH
Confidence 1 2 235789999999999777776 676666555443321111 111111 0 113477877
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCC--CHHHHHHHHH
Q 009181 401 LMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVV--DIFEVNDIMS 461 (541)
Q Consensus 401 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~--~~~~l~~~l~ 461 (541)
++.+ +.+..+.++..+++..+++.|++.|.++-+.-| ..++++|.+++. ...++.+.|.
T Consensus 242 ~rgl--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~ 319 (386)
T PRK08045 242 LRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLS 319 (386)
T ss_pred Hhhh--ccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhcc
Confidence 7544 568889999999999999999999887644221 146899998642 1234444433
Q ss_pred h--CCcee-------------c----------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 462 S--KGWHL-------------N----------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 462 ~--~G~~~-------------~----------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
- .+..+ . ..+. ++.+|+|++. |+.|.++++|+++++...
T Consensus 320 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~~ 384 (386)
T PRK08045 320 LFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAAN 384 (386)
T ss_pred ceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHhh
Confidence 2 11000 0 0111 3689999998 678888999999887654
No 182
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.87 E-value=4e-21 Score=192.93 Aligned_cols=227 Identities=16% Similarity=0.122 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEE
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLW 251 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~ 251 (541)
...++++.+++++|.+.. + ++|+|+|+++..++.++.. +| ++|+++.++|.++..++...|++++
T Consensus 60 ~i~~~~~~~A~~~ga~~~-----~--~~~~Gst~a~~~~l~al~~-----~g---d~Vlv~~~~h~s~~~~~~~~g~~~~ 124 (294)
T cd00615 60 PIKEAQELAARAFGAKHT-----F--FLVNGTSSSNKAVILAVCG-----PG---DKILIDRNCHKSVINGLVLSGAVPV 124 (294)
T ss_pred HHHHHHHHHHHHhCCCCE-----E--EEcCcHHHHHHHHHHHcCC-----CC---CEEEEeCCchHHHHHHHHHCCCEEE
Confidence 345577799999998643 2 5699999999999888753 66 8999999999999999999999999
Q ss_pred EeeCCC--C----CccCHHHHHHhhcc--CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhc
Q 009181 252 RVPVDK--E----FRADVKAIKKYINR--NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (541)
Q Consensus 252 ~v~~~~--~----~~~d~~~Le~~i~~--~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~ 323 (541)
.++.+. + +.+|++++++++++ ++++|++++| |++|.+.|+++|+++|+++|++++||++||.... |...
T Consensus 125 ~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~-~~~~- 201 (294)
T cd00615 125 YLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFR-FHPI- 201 (294)
T ss_pred EecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhc-cCcc-
Confidence 998753 2 47999999999964 6889999998 5799999999999999999999999999986432 1110
Q ss_pred CCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHH
Q 009181 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMS 403 (541)
Q Consensus 324 g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~ 403 (541)
. +.+....|+|+++.++||++.++.++|++..+++......+... ......++.+..+++++-.+++.
T Consensus 202 ---~-~~~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~--------~~~~~ttsps~~~~asl~~a~~~ 269 (294)
T cd00615 202 ---L-PSSAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEA--------LNLHQSTSPSYLILASLDVARAM 269 (294)
T ss_pred ---c-CcchhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHH--------HHHHCCCCcHHHHHHHHHHHHHH
Confidence 1 23334568999999999997777777776666542211111000 00111234444556777777776
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009181 404 LGQEGYLENTKAIMEVSESIQKGIKE 429 (541)
Q Consensus 404 lg~~g~~~~~~~~~~~a~~l~~~L~~ 429 (541)
+..+| .+..++..++++++++.|.+
T Consensus 270 ~~~~g-~~~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 270 MALEG-KELVEELIELALYARQEINK 294 (294)
T ss_pred HHHHh-HHHHHHHHHHHHHHHHHHhC
Confidence 65555 45678888888999888753
No 183
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=4.6e-20 Score=192.04 Aligned_cols=282 Identities=16% Similarity=0.125 Sum_probs=199.6
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH----H
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD----K 241 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~----k 241 (541)
.|...++| +.++++.|.+ . + ++++||++|+.+++.++.. +| ++|+++.+.|.++. .
T Consensus 64 ~pt~~~Le----~~lA~l~g~~--~----~--l~~~sgt~Ai~~~l~al~~-----~G---D~Vl~~~~~y~~~~~~~~~ 123 (394)
T PRK07050 64 TPTSLALA----QRLAEIEGGR--H----A--LLQPSGLAAISLVYFGLVK-----AG---DDVLIPDNAYGPNRDHGEW 123 (394)
T ss_pred CHHHHHHH----HHHHHHhCCC--e----E--EEeccHHHHHHHHHHHHhC-----CC---CEEEEecCCcccHHHHHHH
Confidence 34554444 4888888864 2 4 8999999999999998842 77 99999999998855 4
Q ss_pred HHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 242 a~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
.+..+|++++.++.. +.++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.+..
T Consensus 124 ~~~~~Gi~v~~vd~~-----~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~---- 194 (394)
T PRK07050 124 LARDFGITVRFYDPL-----IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLA---- 194 (394)
T ss_pred HHHhcCeEEEEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccc----
Confidence 567789999988753 55789999999999999999999999999999999999999999999999865432
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHH
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
++....|+|++..+.+|+..+..+ .|+++++++++.+.... .....|+ +.....+|.
T Consensus 195 --------~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~-~~~~~G~------------~~~~~~a~l 253 (394)
T PRK07050 195 --------FKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKL-ARMRLGI------------GVSADDCSL 253 (394)
T ss_pred --------cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHH-HHHhcCC------------CCCHHHHHH
Confidence 122335789999999999655554 56677766654332211 1111111 111335676
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCC----CHHHHHH
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVV----DIFEVND 458 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~----~~~~l~~ 458 (541)
+++ |...+..+.++..+++.++.+.|++.|++..+..| ..+++.|...+. +..++.+
T Consensus 254 ~lr--~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~ 331 (394)
T PRK07050 254 VLR--GLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVE 331 (394)
T ss_pred HHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHH
Confidence 664 44456678888888999999999988876644321 146788887642 2445555
Q ss_pred HHHhCCc----------eecc----CC------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 459 IMSSKGW----------HLNP----LQ------RPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 459 ~l~~~G~----------~~~~----~~------~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
.|...++ .... .. .++.+|+|++. |+.|.++++|+++++..
T Consensus 332 ~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl---E~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 332 ALELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL---EDEADLIADLEQALEAA 392 (394)
T ss_pred cCCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc---CCHHHHHHHHHHHHHHh
Confidence 5554431 1000 00 12579999998 67888888888887653
No 184
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.86 E-value=3.4e-19 Score=188.49 Aligned_cols=310 Identities=13% Similarity=0.082 Sum_probs=201.0
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ 240 (541)
.+|..+++..++++ .+++++|.+ . + ++|+||++|+.+++.++.+ +| | |+++.+.+.++.
T Consensus 72 ~~Y~~~~g~~~Lre----aia~~~~~~--~----v--v~t~ggt~A~~~~~~all~-----pG---D-Vii~~p~~~~~~ 130 (460)
T PRK13238 72 EAYAGSRSYYRLED----AVKDIFGYP--Y----T--IPTHQGRAAEQILFPVLIK-----KG---D-VVPSNYHFDTTR 130 (460)
T ss_pred cccCCCCCHHHHHH----HHHHHhCCC--c----E--EECCCHHHHHHHHHHHhCC-----CC---C-EEccCCcccchH
Confidence 35666777777777 666777664 2 4 8999999999999888754 77 8 888888777888
Q ss_pred HHHhhcCCeEEEeeCCC--------C--CccCHHHHHHhhcc----CceEEEeecCCCCCc-ccc---CHHHHHHHHHHc
Q 009181 241 KAAQYFNIKLWRVPVDK--------E--FRADVKAIKKYINR----NTVLIVGSAPGFPHG-IID---PIQELGELALSH 302 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~--------~--~~~d~~~Le~~i~~----~t~~vv~~~~~~~~G-~id---~i~~I~~la~~~ 302 (541)
..++..|++++.+++++ . |.+|+++|+++|++ +|++|++++|+||+| .+. ++++|+++|++|
T Consensus 131 ~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~ 210 (460)
T PRK13238 131 AHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKY 210 (460)
T ss_pred HHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 88899999999999853 2 44999999999984 799999999999998 554 478999999999
Q ss_pred CCEEEEeCCcccchhhhhhh--cCC---CCCCCCc-CCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccC
Q 009181 303 GTCLHVDLCLGGFVLPFAKK--LGY---PIPPFDF-SVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWS 376 (541)
Q Consensus 303 ~i~lhvD~a~gg~~~~f~~~--~g~---~~p~~~~-~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~ 376 (541)
|++|++|+|+..-..-|... .|+ ++..+.. -....|++++++||.|++|.| |+++.+++++..........+.
T Consensus 211 gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~~~~~~~~ 289 (460)
T PRK13238 211 GIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTECRTLCILYE 289 (460)
T ss_pred CCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHHHhhhcccccC
Confidence 99999999873211111110 111 0000000 012359999999999999886 7777776554433211110011
Q ss_pred CCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-----
Q 009181 377 GGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV----- 451 (541)
Q Consensus 377 ~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~----- 451 (541)
+ ....|.-++....++-.+++..-. ++..+...+.+++|.+.|++. |+.++.+.....+.......
T Consensus 290 g-----~~t~~g~~~~~~~Ala~~l~e~~~---~~~~~~~~~~~~~l~~~L~~~-G~~~~~p~Gg~~v~~d~~~~~~~~~ 360 (460)
T PRK13238 290 G-----FPTYGGLAGRDMEALAVGLYEGMD---EDYLAYRIGQVEYLGEGLEEA-GVPIQTPAGGHAVFVDAGKFLPHIP 360 (460)
T ss_pred C-----cccccCcHHHHHHHHHhhHHHhhC---hHHHHHHHHHHHHHHHHHHHC-CCCeEccCCceEEEEEchhcCCCCC
Confidence 1 001111111112233333321111 233444455679999999887 99998776666666654321
Q ss_pred ----CHHHHHHHHHh-CCceeccC-----------C-----CCCeEEEEecC--CCHHHHHHHHHHHHHHHHH
Q 009181 452 ----DIFEVNDIMSS-KGWHLNPL-----------Q-----RPNSIHICVTL--QHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 452 ----~~~~l~~~l~~-~G~~~~~~-----------~-----~~~~iRi~~~~--~~~e~id~~i~~L~~~~~~ 501 (541)
...+++.+|.+ .|+..... + ....+|+++.. ++.+++|.+.+.|+.+.+.
T Consensus 361 ~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 361 AEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred CCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 34667776665 45432210 1 13689999975 3558899999988887644
No 185
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=8.9e-20 Score=189.77 Aligned_cols=279 Identities=19% Similarity=0.195 Sum_probs=193.1
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH----
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA---- 242 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka---- 242 (541)
|...++|+ .++++.|.+.. +.+++|++|+.+++.++.+ +| ++|+++.+.|.+....
T Consensus 61 p~~~~Le~----~lA~~~g~~~~--------i~~~sG~~Ai~~~l~all~-----~G---d~Vl~~~~~y~~t~~~~~~~ 120 (388)
T PRK07811 61 PTRTALEE----QLAALEGGAYG--------RAFSSGMAATDCLLRAVLR-----PG---DHIVIPNDAYGGTFRLIDKV 120 (388)
T ss_pred ccHHHHHH----HHHHHhCCCce--------EEeCCHHHHHHHHHHHHhC-----CC---CEEEEcCCCchHHHHHHHHh
Confidence 55555555 88889988743 5566779999999988853 67 8999999999864433
Q ss_pred HhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 243 AQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 243 ~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
+..+|++++.++. .|+++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.+...
T Consensus 121 ~~~~gi~~~~~d~-----~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~---- 191 (388)
T PRK07811 121 FTRWGVEYTPVDL-----SDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQ---- 191 (388)
T ss_pred CcCCCeEEEEeCC-----CCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccC----
Confidence 2335888888775 3899999999999999999999999999999999999999999999999998754321
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHH
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~a 400 (541)
. ++ ..|+|+++.+++|++.+|.+ .|+++.+++++...... .....+. ... ...+|.+
T Consensus 192 ----~-p~---~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~-~~~~~g~----------~~s--~~~a~l~ 250 (388)
T PRK07811 192 ----Q-PL---ALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAF-LQNGAGA----------VPG--PFDAYLT 250 (388)
T ss_pred ----C-ch---hhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHH-HHHhcCC----------CCC--HHHHHHH
Confidence 1 12 34789999999999665554 57767666654332111 1110010 011 2245655
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC-----------------eeEEEEecCCC--CHHHHHHHHH
Q 009181 401 LMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD-----------------MTIVAFGSDVV--DIFEVNDIMS 461 (541)
Q Consensus 401 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----------------~~~v~f~~~~~--~~~~l~~~l~ 461 (541)
++ +.+.+..+.++..++++.+.+.|++.|+++-+.-|. +++++|.+++. ...++.+.|.
T Consensus 251 ~~--~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~ 328 (388)
T PRK07811 251 LR--GLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTK 328 (388)
T ss_pred Hh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCC
Confidence 54 334577888888999999999999998876443221 46899998642 2333333332
Q ss_pred h--CCcee-------------cc-------CCC-CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 462 S--KGWHL-------------NP-------LQR-PNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 462 ~--~G~~~-------------~~-------~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
- .+..+ .. .+. ++.+|+|++. ||.+.++++|+++++
T Consensus 329 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~ 387 (388)
T PRK07811 329 VFTLAESLGGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI---EDVADLLADLEQALG 387 (388)
T ss_pred cceeeccCCCCcceEeCCcccCcccCCHhhcCCCCCEEEEEeCC---CCHHHHHHHHHHHhh
Confidence 1 12100 00 111 3689999998 677888888888764
No 186
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.86 E-value=5.7e-20 Score=191.29 Aligned_cols=282 Identities=18% Similarity=0.171 Sum_probs=195.9
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HHH
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDK 241 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~k 241 (541)
.|...++|+ .+++++|.+.. +++++|+.|+..++.++.. +| ++|+++.+.|.+ +..
T Consensus 58 ~p~~~~le~----~lA~l~g~~~a--------v~~~sG~~Ai~~~l~al~~-----~G---d~Vi~~~~~y~~t~~~~~~ 117 (391)
T TIGR01328 58 NPTVSNLEG----RIAFLEGTEAA--------VATSSGMGAIAATLLTILK-----AG---DHLISDECLYGCTFALLEH 117 (391)
T ss_pred CchHHHHHH----HHHHHhCCCcE--------EEECCHHHHHHHHHHHHhC-----CC---CEEEEecCcchHHHHHHHH
Confidence 344555555 89999998642 7888889999988887642 66 899999987764 455
Q ss_pred HHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 242 a~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
.+..+|++++.++.+ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++++.+...
T Consensus 118 ~~~~~G~~~~~vd~~-----d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~--- 189 (391)
T TIGR01328 118 ALTKFGIQVDFINMA-----IPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLT--- 189 (391)
T ss_pred HHhcCCeEEEEECCC-----CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccC---
Confidence 567789999999876 899999999999999999999999999999999999999999999999998744321
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHH
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
. + ...|+|+++.+++|++.++.+ .| +++.++++............ .|...... .+|.
T Consensus 190 -----~-~---~~~g~Divv~S~sK~lgg~g~~~gG-~v~~~~~li~~l~~~~~~~~---------~g~~l~~~--~a~l 248 (391)
T TIGR01328 190 -----N-P---VALGVDVVVHSATKYIGGHGDVVAG-LICGKAELLQQIRMVGIKDM---------TGSVISPF--DAWL 248 (391)
T ss_pred -----C-c---hhcCCCEEEccccccccCCCCceEE-EEEcCHHHHHHHHHHHHHhC---------CCCCCCcH--HHHH
Confidence 1 1 235789999999999544443 35 45666654432221111100 11122212 4566
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC-----------------eeEEEEecCCC--CHHHHHHHH
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD-----------------MTIVAFGSDVV--DIFEVNDIM 460 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----------------~~~v~f~~~~~--~~~~l~~~l 460 (541)
+++ +.+.+..+.++..++++++.+.|++.|+++-+.-|. .++++|.+++. ...++.+.|
T Consensus 249 ~l~--~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l 326 (391)
T TIGR01328 249 ILR--GLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNL 326 (391)
T ss_pred HHh--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhC
Confidence 654 445567778899999999999999998876443221 46899998642 133333333
Q ss_pred Hh--CCcee-------------c----------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 461 SS--KGWHL-------------N----------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 461 ~~--~G~~~-------------~----------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
.- .+..+ . ..+. ++.+|+|++. ||.|.++++|+++++.
T Consensus 327 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 327 KLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL---EDADDLIADLKQALDA 390 (391)
T ss_pred CcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHhh
Confidence 21 12100 0 0111 3579999998 7789999999998864
No 187
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=1.5e-19 Score=184.69 Aligned_cols=278 Identities=14% Similarity=0.129 Sum_probs=194.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEe
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v 253 (541)
.++++.+++.+|.++.+ | ++|+|+++++.+++... . +| ++++++++|+.+..+++..|++++.|
T Consensus 43 ~~lr~~ia~~~~~~~~~----I--~it~Gs~~~l~~~~~~~-~-----~~----~vv~~~P~y~~y~~~~~~~G~~v~~v 106 (332)
T PRK06425 43 TDIEDQIKIYTQGLKIK----V--LIGPGLTHFIYRLLSYI-N-----VG----NIIIVEPNFNEYKGYAFTHGIRISAL 106 (332)
T ss_pred HHHHHHHHHHhCCCcce----E--EECCCHHHHHHHHHHHh-C-----CC----cEEEeCCChHHHHHHHHHcCCeEEEE
Confidence 45777999999998776 6 89999999999988632 1 23 47777999999999999999999999
Q ss_pred eCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCC
Q 009181 254 PVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (541)
Q Consensus 254 ~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~ 330 (541)
|+++ ...|.+.+++ .+++++++++|+||||.+.+ +++|.++|+++++++++|++|+.|... . . .+..
T Consensus 107 p~~~-~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~---~--~-~~~~ 176 (332)
T PRK06425 107 PFNL-INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPN---R--A-EEDV 176 (332)
T ss_pred eCCc-ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccc---c--c-hhHH
Confidence 9975 4456666653 37889999999999999977 667888889999999999999876531 0 0 0000
Q ss_pred Cc-CCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHH
Q 009181 331 DF-SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEG 408 (541)
Q Consensus 331 ~~-~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g 408 (541)
.. ...+-.++..++.|... ++..+|+++.. +++..........|... . . ++ .++.....+.
T Consensus 177 ~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~-~~li~~l~~~~~~~~~~-------------~-~-~~-~~l~~~~~~~ 239 (332)
T PRK06425 177 LLNRSYGNVIIGRSLTKILGIPSLRIGYIATD-DYNMKISRKITEPWSVC-------------D-P-AI-DFIRSIDLDY 239 (332)
T ss_pred HHhccCCCEEEEeecHHhcCCchhhheeeecC-HHHHHHHHHcCCCCccC-------------H-H-HH-HHHHHhhhHH
Confidence 00 01122456678889843 55568987664 44433222111222111 1 1 11 1222222222
Q ss_pred -HHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceecc---CCC--CCeEEEEecC
Q 009181 409 -YLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP---LQR--PNSIHICVTL 482 (541)
Q Consensus 409 -~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~---~~~--~~~iRi~~~~ 482 (541)
.++..+...+.++++.+.|++. ++++..++..+++++..+ +..++.+.|.++|+.+.. ++. ++++|+|+..
T Consensus 240 ~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~--~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~~ 316 (332)
T PRK06425 240 VAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP--DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIRR 316 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC--CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeCC
Confidence 3566778888899999999988 788776677788888875 678899999999976543 211 3699999984
Q ss_pred CCHHHHHHHHHHHHHHH
Q 009181 483 QHVAVVDVFLRDLRESV 499 (541)
Q Consensus 483 ~~~e~id~~i~~L~~~~ 499 (541)
.++.++|+++|++++
T Consensus 317 --~~~~~~l~~al~~~~ 331 (332)
T PRK06425 317 --RSFNIKLVNALRNFL 331 (332)
T ss_pred --HHHHHHHHHHHHHHh
Confidence 589999999998764
No 188
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.86 E-value=2.9e-20 Score=192.43 Aligned_cols=302 Identities=16% Similarity=0.186 Sum_probs=207.7
Q ss_pred CCCcccchHHHHHHHHHHHHHHHHhCC--CCC-CCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCcc
Q 009181 160 PLHLDIFQSVARFEAEVIAMTAALLGN--KEK-ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAH 236 (541)
Q Consensus 160 ~~~~~~~~~~~~~e~ev~~~la~l~g~--~~~-~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h 236 (541)
...|....+...+++.+.+++.+-.|. +++ + + ++++|+++++..+...++ ..+| +.|+++.+.|
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~----i--~~~~G~~~~~~~~~~~~~----~~~~---~~vlv~~P~y 103 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVDPEAN----I--LVTSGAQAALFLLLRLLK----INPG---DTVLVPDPCY 103 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEG----E--EEESHHHHHHHHHHHHHH----SSTT---SEEEEEESSS
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCcccccceE----E--EEecccccchhhhhhccc----cccc---ccceecCCcc
Confidence 345666677788888776666654444 344 3 4 677776777666666653 1245 8899999999
Q ss_pred chHHHHHhhcCCeEEEeeCC--CCCccCHHHHHHhhcc------CceEEEeecCCCCCccccCHH---HHHHHHHHcCCE
Q 009181 237 SAYDKAAQYFNIKLWRVPVD--KEFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDPIQ---ELGELALSHGTC 305 (541)
Q Consensus 237 ~s~~ka~~~~G~~v~~v~~~--~~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~i~---~I~~la~~~~i~ 305 (541)
+.+...++..|++++.+|++ .++.+|+++|++.+++ ++.++++++|+||||.+.+.+ +|+++|++||++
T Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ 183 (363)
T PF00155_consen 104 PSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNII 183 (363)
T ss_dssp THHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSE
T ss_pred ccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccc
Confidence 99999999999999999975 5889999999999987 678999999999999987754 555569999999
Q ss_pred EEEeCCcccchhhhhhhcCCCCCCCCcCCCCc-eEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCC
Q 009181 306 LHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV-TSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSP 383 (541)
Q Consensus 306 lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv-dsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (541)
+++|++|+.+... ..+. .+.......+. .++..++.|.. ..+..+|+++. ++++.+........|..
T Consensus 184 ii~De~y~~~~~~---~~~~-~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~~~l~~~~~~~~~------ 252 (363)
T PF00155_consen 184 IIVDEAYSDLIFG---DPDF-GPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA-PPELIERLRRFQRSGLS------ 252 (363)
T ss_dssp EEEEETTTTGBSS---SSHT-HHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE-EHHHHHHHHHHHHHTTS------
T ss_pred eeeeeceeccccC---CCcc-Ccccccccccccceeeeeccccccccccccccccc-hhhhhhhhhhccccccc------
Confidence 9999999877652 0000 00000011122 57788999973 23345898777 55554433222222211
Q ss_pred cccCCCCCchHHHHHHHHHHH---hH--HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHH
Q 009181 384 TVAGSRPGGLIAGAWAALMSL---GQ--EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVND 458 (541)
Q Consensus 384 ~~~gsr~~~~~a~~~~al~~l---g~--~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~ 458 (541)
+ ...+.++...+ +. +..++..+++.++++++.+.|++. ++.+..++...+++......+..++.+
T Consensus 253 ------~---~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ 322 (363)
T PF00155_consen 253 ------S---SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPEAGFFLWVRLDPNDAEELAQ 322 (363)
T ss_dssp ------S---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSEEEEEESHHHHHHHHH
T ss_pred ------c---chhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeeccCccEEEEEcccchHHHHHH
Confidence 0 11222222222 21 267889999999999999999988 999887765555555554335678999
Q ss_pred HHHhC-Cceecc---CCCCCeEEEEecCCCHHHHHHHHHHH
Q 009181 459 IMSSK-GWHLNP---LQRPNSIHICVTLQHVAVVDVFLRDL 495 (541)
Q Consensus 459 ~l~~~-G~~~~~---~~~~~~iRi~~~~~~~e~id~~i~~L 495 (541)
.|.++ |+.+.. ++.++++|+++...+.+++++++++|
T Consensus 323 ~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 323 ELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp HHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred HHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 99998 976543 33478999999555669999999876
No 189
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=2.5e-19 Score=185.49 Aligned_cols=286 Identities=17% Similarity=0.172 Sum_probs=202.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEe
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v 253 (541)
.++++.+++++|+++++ + ++|+|+++++.+++.++.. +| .++|+++.+.+..+...++..|++++.+
T Consensus 62 ~~lr~~ia~~~~~~~~~----I--~~t~G~~~~l~~~~~~~~~-----~g--~~~vlv~~p~y~~~~~~~~~~g~~~~~v 128 (364)
T PRK04781 62 PGLRSALAALYGCAPEQ----L--LIGRGSDEAIDLLVRALCV-----PG--RDAVLVTPPVFGMYAVCARLQNAPLVEV 128 (364)
T ss_pred HHHHHHHHHHhCcChHH----E--EEeCCHHHHHHHHHHHhcC-----CC--CCeEEEcCCChHHHHHHHHHcCCEEEEE
Confidence 35667888888988765 6 8999999999999988743 33 1479999999988999899999999999
Q ss_pred eCCC---CCccCHHHHHHh-hccCceEEEeecCCCCCccccCHHHHHHHHHH--cCCEEEEeCCcccchhhhhhhcCCCC
Q 009181 254 PVDK---EFRADVKAIKKY-INRNTVLIVGSAPGFPHGIIDPIQELGELALS--HGTCLHVDLCLGGFVLPFAKKLGYPI 327 (541)
Q Consensus 254 ~~~~---~~~~d~~~Le~~-i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~--~~i~lhvD~a~gg~~~~f~~~~g~~~ 327 (541)
|+++ ++.+|+++++++ +++++.+|++++|+||||.+.+.+++.++++. +++++++|++|+.|... . ...
T Consensus 129 ~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~---~--~~~ 203 (364)
T PRK04781 129 PLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDV---P--SAV 203 (364)
T ss_pred ecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCC---c--chH
Confidence 9842 457899998654 46789999999999999999998888888775 47999999999876421 0 000
Q ss_pred CCCCcCCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhH
Q 009181 328 PPFDFSVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ 406 (541)
Q Consensus 328 p~~~~~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~ 406 (541)
+..+ .... -++..++.|.. .++..+|+++. ++++..........|.. + ..++.++...+..
T Consensus 204 ~~~~-~~~~-vi~~~SfSK~~gl~GlRvGy~v~-~~~l~~~l~~~~~~~~~----------~-----~~~~~~a~~~l~~ 265 (364)
T PRK04781 204 GLLA-RYDN-LAVLRTLSKAHALAAARIGSLIA-NAELIAVLRRCQAPYPV----------P-----TPCAALAEQALSA 265 (364)
T ss_pred HHHh-hCCC-EEEEecChhhcccccceeeeeeC-CHHHHHHHHhccCCCCC----------C-----HHHHHHHHHHHhc
Confidence 0111 1112 35667899984 35667998664 44444332222222211 1 1233444444422
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccC----CCCCeEEEE
Q 009181 407 ---EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPL----QRPNSIHIC 479 (541)
Q Consensus 407 ---~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~----~~~~~iRi~ 479 (541)
+...+..++..+.++++.+.|++++++..+.++..++++++++ +..++.+.|.++|+.+... +.++++||+
T Consensus 266 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~--~~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris 343 (364)
T PRK04781 266 PALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD--DAEAAFQALLAAGVVVRDQRAAPRLSDALRIT 343 (364)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--CHHHHHHHHHHCCeEEeeCCCCCCCCCeEEEe
Confidence 3455666777888899999999988875445667788888775 5678889999999876442 235789999
Q ss_pred ecCCCHHHHHHHHHHHHHHH
Q 009181 480 VTLQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 480 ~~~~~~e~id~~i~~L~~~~ 499 (541)
++. .++.++++++|+++.
T Consensus 344 ~~~--~~~~~~l~~al~~~~ 361 (364)
T PRK04781 344 LGT--PEQNDRVLAALQRTQ 361 (364)
T ss_pred CCC--HHHHHHHHHHHHHHH
Confidence 983 588899999998754
No 190
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.86 E-value=2.5e-19 Score=186.19 Aligned_cols=300 Identities=15% Similarity=0.099 Sum_probs=202.5
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhh
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY 245 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~ 245 (541)
.|...++|+ .+++++|.+. + ++|+|||+|+.+++.++. -++| ++|+++.++|++...++..
T Consensus 32 g~~~~~le~----~la~~~g~~~------~--v~~~sgt~al~lal~al~----~~~G---d~Viv~~~~~~~~~~~~~~ 92 (379)
T PRK11658 32 GPKNQALEQ----AFCQLTGNQH------A--IAVSSATAGMHITLMALG----IGPG---DEVITPSLTWVSTLNMIVL 92 (379)
T ss_pred CHhHHHHHH----HHHHHhCCCe------E--EEECCHHHHHHHHHHHcC----CCCC---CEEEECCCcHHHHHHHHHH
Confidence 355555555 8888888852 2 789999999999998872 1266 8999999999999999999
Q ss_pred cCCeEEEeeCCC-CCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcC
Q 009181 246 FNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLG 324 (541)
Q Consensus 246 ~G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g 324 (541)
.|++++.+++++ ++.+|+++++++++++|++|+.++ ++|...|+++|.++|+++|+++++|++++.+... .|
T Consensus 93 ~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~~~~---~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~----~~ 165 (379)
T PRK11658 93 LGATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPVH---YAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYY----KG 165 (379)
T ss_pred cCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEEEeC---CCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeE----CC
Confidence 999999999986 567999999999999999887444 5899999999999999999999999998743321 11
Q ss_pred CCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccc-cccccCCCcc-----C-CC----cccCCCCCch
Q 009181 325 YPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFV-AVTEWSGGLY-----V-SP----TVAGSRPGGL 393 (541)
Q Consensus 325 ~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~-~~~~~~~~~~-----~-~~----~~~gsr~~~~ 393 (541)
......|++++|++.+|.+.++ ..|+++..++++...... ....+....+ . .+ ...|....
T Consensus 166 -----~~~g~~g~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~-- 237 (379)
T PRK11658 166 -----RHIGARGTAIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYN-- 237 (379)
T ss_pred -----eecCCCCCEEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccC--
Confidence 1123456788999999986443 345555555554432211 1111100000 0 00 01122221
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC-----eeEEEEecC----CCCHHHHHHHHHhCC
Q 009181 394 IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD-----MTIVAFGSD----VVDIFEVNDIMSSKG 464 (541)
Q Consensus 394 ~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----~~~v~f~~~----~~~~~~l~~~l~~~G 464 (541)
+..+.+++.....+++++..++..++++++.+.|++++...+..+.. ..++.+..+ +.+..++.+.|.++|
T Consensus 238 ~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~g 317 (379)
T PRK11658 238 LADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERG 317 (379)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCC
Confidence 23556677667778999999999999999999999886433322211 234555543 236789999999999
Q ss_pred ceecc-----------------CCCCCe----EE-EEecC---CCHHHHHHHHHHHHHHH
Q 009181 465 WHLNP-----------------LQRPNS----IH-ICVTL---QHVAVVDVFLRDLRESV 499 (541)
Q Consensus 465 ~~~~~-----------------~~~~~~----iR-i~~~~---~~~e~id~~i~~L~~~~ 499 (541)
+.... ...|++ -| ++++. .+.++++++++.|++++
T Consensus 318 I~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 318 IGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred CCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 54321 011210 11 33332 23489999999998864
No 191
>PRK03321 putative aminotransferase; Provisional
Probab=99.86 E-value=5.5e-20 Score=189.65 Aligned_cols=285 Identities=17% Similarity=0.153 Sum_probs=202.8
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++++|.++++ + ++|+|+++++..++.+.. ++| ++|+++.+.+..+...++..|++++.+|
T Consensus 61 ~lr~~ia~~~~~~~~~----I--~~~~G~~~~l~~~~~~~~-----~~g---d~Vli~~p~y~~~~~~~~~~g~~~~~v~ 126 (352)
T PRK03321 61 ELRAALAEHLGVPPEH----V--AVGCGSVALCQQLVQATA-----GPG---DEVIFAWRSFEAYPILVQVAGATPVQVP 126 (352)
T ss_pred HHHHHHHHHhCcCHHH----E--EECCCHHHHHHHHHHHhc-----CCC---CEEEeCCCCHHHHHHHHHHcCCEEEEcc
Confidence 4556788888887665 6 899999999888877654 266 8999999998888888999999999999
Q ss_pred CCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHH--cCCEEEEeCCcccchhhhhhhcCCCCCCCCc
Q 009181 255 VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALS--HGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~--~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~ 332 (541)
.++++.+|++++++++++++++|++++|+||+|.+.|.++|.++|++ +++++++|++|+.+... . ...+.+..
T Consensus 127 ~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~---~--~~~~~~~~ 201 (352)
T PRK03321 127 LTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRD---D--DVPDGLEL 201 (352)
T ss_pred CCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccC---c--CCCcHHHH
Confidence 98778899999999999999999999999999999999999999987 59999999999866531 0 00011111
Q ss_pred CCC-CceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHH-hHHHH
Q 009181 333 SVQ-GVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL-GQEGY 409 (541)
Q Consensus 333 ~~~-gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l-g~~g~ 409 (541)
... .-.++..++.|.+. .+..+|+++. ++++..........|. ....++.++...+ ..+.+
T Consensus 202 ~~~~~~vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~~~~~~~~~~~---------------~s~~~q~~a~~~l~~~~~~ 265 (352)
T PRK03321 202 VRDHPNVVVLRTFSKAYGLAGLRVGYAVG-HPEVIAALRKVAVPFS---------------VNSLAQAAAIASLAAEDEL 265 (352)
T ss_pred HhhCCCEEEEecchHHhhhHHHhhhhhcC-CHHHHHHHHHhcCCCC---------------CCHHHHHHHHHHhcCHHHH
Confidence 111 12355667889942 3344898665 4444432221111111 0122444444333 33445
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHH
Q 009181 410 LENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVD 489 (541)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id 489 (541)
.+..++..+.++++.+.|++. ++.+. ++...+++++.. .+..++.+.|.++|+.+..++ ++++|++++ +.++.+
T Consensus 266 ~~~~~~~~~~r~~~~~~L~~~-~~~~~-~~~g~~i~i~l~-~~~~~~~~~l~~~gI~v~~~~-~~~iRi~~~--~~~~~~ 339 (352)
T PRK03321 266 LERVDAVVAERDRVRAALRAA-GWTVP-PSQANFVWLPLG-ERTADFAAAAAEAGVVVRPFA-GEGVRVTIG--APEEND 339 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCccC-CCCCCEEEEeCC-CCHHHHHHHHHHCCEEEEccC-CCcEEEeeC--CHHHHH
Confidence 666666777778888999886 66643 445667777764 357789999999998877654 346999986 358999
Q ss_pred HHHHHHHHHHH
Q 009181 490 VFLRDLRESVE 500 (541)
Q Consensus 490 ~~i~~L~~~~~ 500 (541)
+++++|+++++
T Consensus 340 ~~~~al~~~~~ 350 (352)
T PRK03321 340 AFLRAARAWRA 350 (352)
T ss_pred HHHHHHHHHhc
Confidence 99999998754
No 192
>PRK08637 hypothetical protein; Provisional
Probab=99.86 E-value=2.6e-19 Score=186.98 Aligned_cols=333 Identities=11% Similarity=0.070 Sum_probs=211.3
Q ss_pred HHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhC-CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhc
Q 009181 144 HFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLG-NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKR 222 (541)
Q Consensus 144 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g-~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~ 222 (541)
....+.+++........+.|....|...+.+.+.+++.+..+ ..+.+ -.++ ++|+|+++++.+++.++.+ +
T Consensus 21 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-~~~I--~it~G~~~al~~~~~~l~~-----~ 92 (388)
T PRK08637 21 YLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKK-MSLP--IVTNALTHGLSLVADLFVD-----Q 92 (388)
T ss_pred hHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccc-ccee--eEccchHHHHHHHHHHhcC-----C
Confidence 455555666554333445566667777777766666655432 22210 0136 8999999999999988764 6
Q ss_pred CCCCCeEEecCCccchHHHHH-hhcCCeEEEeeCC-CCCccCHHHHHHhhc----cCceEEEeecCCCCCccccC---HH
Q 009181 223 GITRPEMIIPVSAHSAYDKAA-QYFNIKLWRVPVD-KEFRADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDP---IQ 293 (541)
Q Consensus 223 Gi~~~~vi~~~~~h~s~~ka~-~~~G~~v~~v~~~-~~~~~d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~---i~ 293 (541)
| ++|+++.+.|+.+...+ ...|++++.+|+. +++.+|+++++++++ +.+.++++++|+||||.+.+ ++
T Consensus 93 g---d~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~ 169 (388)
T PRK08637 93 G---DTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEAT 169 (388)
T ss_pred C---CEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHH
Confidence 6 89999999999999875 4689999999984 556789999999887 55677888999999999876 56
Q ss_pred HHHHHHHH-----cCCEEEEeCCcccchhhhhhhcCCCCCC-CCc---CCCCceEE-EeCCCC-CCCCCCCceEEEEec-
Q 009181 294 ELGELALS-----HGTCLHVDLCLGGFVLPFAKKLGYPIPP-FDF---SVQGVTSI-SVDVHK-YGLAPKGTSVVLYRN- 361 (541)
Q Consensus 294 ~I~~la~~-----~~i~lhvD~a~gg~~~~f~~~~g~~~p~-~~~---~~~gvdsi-s~~~hK-~~~~p~g~g~ll~~~- 361 (541)
+|+++|++ |++++++|++|..+... .. . .++ +.. ....+-.+ ..++.| ++.++..+|++++..
T Consensus 170 ~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~--~~-~--~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~ 244 (388)
T PRK08637 170 AIVEAIKELADAGTKVVAVVDDAYFGLFYE--DS-Y--KESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTK 244 (388)
T ss_pred HHHHHHHHHHhcCCcEEEEecccchhcccC--Cc-c--chhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccc
Confidence 77777765 89999999999877531 10 0 111 110 11233233 336777 466667799988653
Q ss_pred ----ccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHH----HHHHHHHHHHHHHhhcC---
Q 009181 362 ----REIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENT----KAIMEVSESIQKGIKEI--- 430 (541)
Q Consensus 362 ----~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~----~~~~~~a~~l~~~L~~~--- 430 (541)
+++.+......... ..... ......++.++...+....+.+.. +...+..+.+.+.|++.
T Consensus 245 ~~~~~~l~~~~~~~~~~~-----~~~~~----~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~ 315 (388)
T PRK08637 245 AGSSQTVKEALEKKVKGL-----IRSNI----SNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYD 315 (388)
T ss_pred cCCcHHHHHHHHHHHHHH-----hhccc----CCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 33332211000000 00000 001122555555555443443333 33444555666667554
Q ss_pred CCeEEecCCCeeEEEEecCCCCHHHHHHHHH-hCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 431 PELFIIGRPDMTIVAFGSDVVDIFEVNDIMS-SKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 431 ~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~-~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
+++.+..+....+++++.++.+..++.+.|. ++|+.+... .++++|++++..+.+++++.+++|.++++.+
T Consensus 316 ~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~-~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 316 DAWQAYPFNSGYFMCLKLKGVDAEELRVHLLEKYGIGTIAL-NETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred CCcccccccceEEEEecCChHHHHHHHHHHhhhcceEEEec-cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 2566554444455666765445678888885 568765433 3568999999877799999999999998765
No 193
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.86 E-value=9.3e-20 Score=190.40 Aligned_cols=283 Identities=14% Similarity=0.155 Sum_probs=196.1
Q ss_pred cchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH----H
Q 009181 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY----D 240 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~----~ 240 (541)
..|...++|+ .+++++|.+. + ++++||+.|+..++.+... +| ++|+++.+.|.+. .
T Consensus 62 ~~p~~~~Le~----~iA~~~g~~~------~--l~~~sG~~Ai~~al~~ll~-----~G---d~Vl~~~~~y~~~~~~~~ 121 (400)
T PRK06234 62 GNPTSTEVEN----KLALLEGGEA------A--VVAASGMGAISSSLWSALK-----AG---DHVVASDTLYGCTFALLN 121 (400)
T ss_pred CCccHHHHHH----HHHHHhCCCc------E--EEEcCHHHHHHHHHHHHhC-----CC---CEEEEecCccchHHHHHH
Confidence 4566666666 8888888642 2 7899999999888877653 67 8999999988764 3
Q ss_pred HHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHc--CCEEEEeCCcccchhh
Q 009181 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH--GTCLHVDLCLGGFVLP 318 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~--~i~lhvD~a~gg~~~~ 318 (541)
..++..|++++.++.+ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++ |+++++|++|+.+...
T Consensus 122 ~~~~~~G~~v~~vd~~-----d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~ 196 (400)
T PRK06234 122 HGLTRYGVEVTFVDTS-----NLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQ 196 (400)
T ss_pred HHHhhCCeEEEEECCC-----CHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcC
Confidence 4567789999999865 89999999999999999999999999999999999999997 9999999999755331
Q ss_pred hhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEeccccccccccc-ccccCCCccCCCcccCCCCCchHH
Q 009181 319 FAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVA-VTEWSGGLYVSPTVAGSRPGGLIA 395 (541)
Q Consensus 319 f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gsr~~~~~a 395 (541)
. ++ ..|+|++..+++|++.++.. .|+++.+ +++....... ...+. |.... ..
T Consensus 197 --------~-~l---~~g~Divv~S~sK~l~g~g~~~gG~v~~~-~~~~~~l~~~~~~~~~----------g~~l~--p~ 251 (400)
T PRK06234 197 --------R-PL---QLGADVVVHSATKYLNGHGDVIAGFVVGK-EEFINQVKLFGIKDMT----------GSVIG--PF 251 (400)
T ss_pred --------C-ch---hhCCcEEEeeccccccCCCCceeEEEEec-HHHHHHHHHHHHHHhc----------CCCCC--HH
Confidence 1 12 23789999999999544332 4765554 4433221100 01111 11111 22
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCC--CHHHH
Q 009181 396 GAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVV--DIFEV 456 (541)
Q Consensus 396 ~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~--~~~~l 456 (541)
.+|..++ |.+.+..+.++..++++++.+.|++.|.+.-+.-| ..++++|.+++. ...++
T Consensus 252 ~a~l~~~--~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f 329 (400)
T PRK06234 252 EAFLIIR--GMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVV 329 (400)
T ss_pred HHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHH
Confidence 4555553 44556778888889999999999998877543222 146889988642 23344
Q ss_pred HHHHHhCC--ce------ec-----------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 457 NDIMSSKG--WH------LN-----------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 457 ~~~l~~~G--~~------~~-----------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
.+.|.--+ .. +. ..+. ++.+|+|++. |+.+.++++|+++++.+
T Consensus 330 ~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 330 MNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL---EDVDDIIADLKQALDLI 398 (400)
T ss_pred HHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHHHH
Confidence 44444322 00 00 0111 2679999998 67888888888888754
No 194
>PRK08175 aminotransferase; Validated
Probab=99.86 E-value=6.6e-19 Score=184.45 Aligned_cols=307 Identities=12% Similarity=0.108 Sum_probs=211.2
Q ss_pred CCCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc
Q 009181 160 PLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (541)
Q Consensus 160 ~~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~ 237 (541)
...|....|..++++.+.+++.+.+|.+ +++ ++ ++|+|+++++..++.++.+ +| ++|+++++.|+
T Consensus 60 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---~i--~~t~G~~~~l~~~~~~~~~-----~g---d~Vlv~~P~y~ 126 (395)
T PRK08175 60 THGYSTSRGIPRLRRAISRWYQDRYDVDIDPES---EA--IVTIGSKEGLAHLMLATLD-----HG---DTVLVPNPSYP 126 (395)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---cE--EEccCcHHHHHHHHHHhCC-----CC---CEEEEcCCCCc
Confidence 3455556677888888888888877764 331 26 8999999999988877653 67 89999999999
Q ss_pred hHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhc---cCceEEEeecCCCCCccccCH---HHHHHHHHHcCCEEEEeCC
Q 009181 238 AYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDPI---QELGELALSHGTCLHVDLC 311 (541)
Q Consensus 238 s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~---~~t~~vv~~~~~~~~G~id~i---~~I~~la~~~~i~lhvD~a 311 (541)
.+...++..|++++.+|+++++ .+.++++++++ ++++++++++|+||||.+.+. ++|.++|++||+++++|++
T Consensus 127 ~~~~~~~~~g~~~~~v~~~~~~-~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~ 205 (395)
T PRK08175 127 IHIYGAVIAGAQVRSVPLVEGV-DFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLA 205 (395)
T ss_pred chHHHHHHcCCeEEEEecccCC-CcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecc
Confidence 9999899999999999997543 35788888886 378999999999999999886 7899999999999999999
Q ss_pred cccchhhhhhhcCCCCCCCC-c-CCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCC
Q 009181 312 LGGFVLPFAKKLGYPIPPFD-F-SVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGS 388 (541)
Q Consensus 312 ~gg~~~~f~~~~g~~~p~~~-~-~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs 388 (541)
|+.+.. . +...+.+. . ...+..+++.++.|.+ ..+..+|+++ .++++.............+ .+
T Consensus 206 y~~l~~---~--~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~-~~~~l~~~~~~~~~~~~~~--------~~ 271 (395)
T PRK08175 206 YADIVY---D--GWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMV-GNPELVSALARIKSYHDYG--------TF 271 (395)
T ss_pred hHhhcc---C--CCCCcchhcCCCcccCEEEEeeccccccCcchhheeee-CCHHHHHHHHHHHhhcccC--------CC
Confidence 976543 1 11011111 1 1123445677889994 2444589765 4555544221111100000 00
Q ss_pred CCCchHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC----CHHHHHHHHH-
Q 009181 389 RPGGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV----DIFEVNDIMS- 461 (541)
Q Consensus 389 r~~~~~a~~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~----~~~~l~~~l~- 461 (541)
...+.++...+ ....+++..+.+.++++++.+.|++. ++.+..+....++++.+++. +..++.+.+.
T Consensus 272 -----~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~ 345 (395)
T PRK08175 272 -----TPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLN 345 (395)
T ss_pred -----cHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECCcccCCCCHHHHHHHHHH
Confidence 01222222223 23456677777888889999999987 77765455677888887643 4678887765
Q ss_pred hCCceeccC---C--CCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 462 SKGWHLNPL---Q--RPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 462 ~~G~~~~~~---~--~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
+.|+.+... + .++++|+++. ...+.+.+.+++|++++++
T Consensus 346 ~~gv~v~p~~~f~~~~~~~lRis~~-~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 346 EAKVCVSPGIGFGDYGDTHVRFALI-ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred hCCEEEeCchhhCcCCCCeEEEEeC-CCHHHHHHHHHHHHHHHHh
Confidence 678765432 2 2368999997 3558888888888888753
No 195
>PLN02509 cystathionine beta-lyase
Probab=99.86 E-value=1.7e-19 Score=189.73 Aligned_cols=276 Identities=16% Similarity=0.182 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH----HhhcCC
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA----AQYFNI 248 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka----~~~~G~ 248 (541)
..++.++++++.|.+. . +++++|+.++.+++ .+. ++| ++|+++.+.|.++... +...|+
T Consensus 135 ~~aLE~~lA~leg~e~------a--i~~~SG~aAi~~il-~ll-----~~G---D~VI~~~~~y~~t~~ll~~~l~~~G~ 197 (464)
T PLN02509 135 RDALESLLAKLDKADR------A--FCFTSGMAALSAVT-HLI-----KNG---EEIVAGDDVYGGSDRLLSQVVPRSGV 197 (464)
T ss_pred HHHHHHHHHHHhCCCE------E--EEeCcHHHHHHHHH-HHh-----CCC---CEEEEcCCchhhHHHHHHHHHHHCCe
Confidence 3446668888887543 2 66777787765444 332 267 9999999999987643 456799
Q ss_pred eEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCC
Q 009181 249 KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIP 328 (541)
Q Consensus 249 ~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p 328 (541)
+++.++.. |+++++++++++|++|++++|+||+|.+.|+++|+++|++||++++||++++.++.. .
T Consensus 198 ~v~~vd~~-----d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~--------~- 263 (464)
T PLN02509 198 VVKRVNTT-----NLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLS--------R- 263 (464)
T ss_pred EEEEeCCC-----CHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccC--------C-
Confidence 99988753 789999999999999999999999999999999999999999999999998755431 1
Q ss_pred CCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhH
Q 009181 329 PFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ 406 (541)
Q Consensus 329 ~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~ 406 (541)
+ ...|+|+++.+.+||+.++.+ .|++..+++.+....+. ..... |... ....+|..+ .|.
T Consensus 264 p---l~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~-~~~~~----------g~~l--~p~~A~l~l--r~L 325 (464)
T PLN02509 264 P---LELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF-LQNSE----------GSGL--APFDCWLCL--RGI 325 (464)
T ss_pred h---hhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHH-HHHhc----------CCCc--CHHHHHHHH--hhh
Confidence 1 235789999999999877666 66655555443221111 11111 1111 123566666 455
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCeEEe-cC-----C-----------CeeEEEEecCCC-CHHHHHHHHH--hCCce
Q 009181 407 EGYLENTKAIMEVSESIQKGIKEIPELFII-GR-----P-----------DMTIVAFGSDVV-DIFEVNDIMS--SKGWH 466 (541)
Q Consensus 407 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~-----~-----------~~~~v~f~~~~~-~~~~l~~~l~--~~G~~ 466 (541)
+.+..++++..++++++.+.|++.|.++-+ .| | .+++++|...+. ...++.+.|. ..+..
T Consensus 326 ~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~a~s 405 (464)
T PLN02509 326 KTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAVS 405 (464)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHcCCcceEccc
Confidence 677889999999999999999999887533 32 1 156889987321 1233333332 11100
Q ss_pred -------e------c----------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 467 -------L------N----------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 467 -------~------~----------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
+ . ..+. ++.+|+|++. |++|.++++|+++++
T Consensus 406 lG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl---E~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 406 FGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFR 460 (464)
T ss_pred CCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHc
Confidence 0 0 0111 2689999997 678889999998874
No 196
>PLN02242 methionine gamma-lyase
Probab=99.86 E-value=1.1e-19 Score=190.27 Aligned_cols=283 Identities=16% Similarity=0.112 Sum_probs=196.7
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHH--
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA-- 243 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~-- 243 (541)
.|...++|+ .+++++|.+.. ++|+||++|+..++.++.. +| ++|+++.+.|+.....+
T Consensus 75 ~Pt~~~LE~----~lA~l~g~~~~--------l~~~sG~~Ai~~al~al~~-----~G---D~Vl~~~~~Y~~~~~~~~~ 134 (418)
T PLN02242 75 NPTVLNLGR----QMAALEGTEAA--------YCTASGMSAISSVLLQLCS-----SG---GHVVASNTLYGGTHALLAH 134 (418)
T ss_pred ChhHHHHHH----HHHHHhCCCeE--------EEEccHHHHHHHHHHHHhC-----CC---CEEEEcCCcHHHHHHHHHH
Confidence 455555555 89999988642 7899999999999998853 67 99999999888776654
Q ss_pred ---hhcCCeEEEeeCCCCCccCHHHHHHhhccC-ceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhh
Q 009181 244 ---QYFNIKLWRVPVDKEFRADVKAIKKYINRN-TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPF 319 (541)
Q Consensus 244 ---~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~-t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f 319 (541)
+..|++++.++.+ |+++++++++++ |++|++++|+||+|.+.|+++|+++|++||+++++|++|+.+..
T Consensus 135 ~~~~~~G~~~~~~d~~-----d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~-- 207 (418)
T PLN02242 135 FLPRKCNITTTFVDIT-----DLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVL-- 207 (418)
T ss_pred hhhhccCceEEEcCCC-----CHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCC--
Confidence 4578888877764 899999999984 99999999999999999999999999999999999999964322
Q ss_pred hhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHH
Q 009181 320 AKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGA 397 (541)
Q Consensus 320 ~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~ 397 (541)
+....|+|++..+++|+..++.. .|+++ .++++..........+ ....|.. ...+
T Consensus 208 -----------~~~~~g~divv~S~SK~l~g~g~~~gG~iv-~~~~li~~l~~~~~~~-------~~~~g~~----~~~~ 264 (418)
T PLN02242 208 -----------SPARLGADVVVHSISKFISGGADIIAGAVC-GPAELVNSMMDLHHGA-------LMLLGPT----MNPK 264 (418)
T ss_pred -----------CHHHcCCcEEEEeCccccCCCCCceEEEEE-cCHHHHHHHHHHhhhh-------hhccCCC----CCHH
Confidence 11223689999999999444432 46544 4444433221111100 0011211 1233
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-------------------CeeEEEEecCCC-CHHHHH
Q 009181 398 WAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-------------------DMTIVAFGSDVV-DIFEVN 457 (541)
Q Consensus 398 ~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-------------------~~~~v~f~~~~~-~~~~l~ 457 (541)
.+++...+...+..+.++..++++++.+.|++. ++++..|. ..++++|.+.+. ...++.
T Consensus 265 ~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~-~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~ 343 (418)
T PLN02242 265 VAFELSERLPHLSLRMKEHCRRAMEYAKRMKEL-GLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLM 343 (418)
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhC-CCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHH
Confidence 344444555577778889999999999999998 56776432 256888988642 244555
Q ss_pred HHHH------hCCcee---------c--------------cCCC-CCeEEEEecCCCHHH-HHHHHHHHHHHHHHH
Q 009181 458 DIMS------SKGWHL---------N--------------PLQR-PNSIHICVTLQHVAV-VDVFLRDLRESVETV 502 (541)
Q Consensus 458 ~~l~------~~G~~~---------~--------------~~~~-~~~iRi~~~~~~~e~-id~~i~~L~~~~~~l 502 (541)
+.+. ..+..+ + ..+. ++.+|+|++. |+ +|.++++|+++++..
T Consensus 344 ~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---E~~~~dli~dl~~al~~~ 416 (418)
T PLN02242 344 RYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY---TGTLEQRWSQFEKALSAM 416 (418)
T ss_pred HHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecC---CCCHHHHHHHHHHHHHHh
Confidence 6555 212100 0 0111 2579999997 64 888999999988764
No 197
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=2.4e-19 Score=185.91 Aligned_cols=287 Identities=17% Similarity=0.120 Sum_probs=205.8
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++.+++++++ + ++|+|+++++..++.++.+ +| +.|+++.+.|+.+...++.+|.+++.+|
T Consensus 71 ~Lr~~ia~~~~~~~~~----I--~it~G~~~~l~~~~~~~~~-----~g---d~vlv~~p~y~~~~~~~~~~g~~~~~vp 136 (369)
T PRK08153 71 DLRHALAAHHGVAPEN----I--MVGEGIDGLLGLIVRLYVE-----PG---DPVVTSLGAYPTFNYHVAGFGGRLVTVP 136 (369)
T ss_pred HHHHHHHHHhCCCHHH----E--EEcCCHHHHHHHHHHHhcC-----CC---CEEEECCCcchHHHHHHHHcCCeEEEee
Confidence 4666788888887765 6 9999999999999888753 67 8999999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhh-ccCceEEEeecCCCCCccccCHHHHHHHHHHc--CCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 255 VDKEFRADVKAIKKYI-NRNTVLIVGSAPGFPHGIIDPIQELGELALSH--GTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i-~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~--~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
.+++ .+|++++++++ +++++++++++|+||||.+.+.+++.++++.+ +++|++|++|+.+.. . +. .+.+.
T Consensus 137 ~~~~-~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~---~--~~-~~~~~ 209 (369)
T PRK08153 137 YRDD-REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAP---A--GA-APPID 209 (369)
T ss_pred CCCC-CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcC---c--cc-chhhh
Confidence 8665 48999998776 46788999999999999999988887777654 899999999986542 1 11 11222
Q ss_pred cCCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh-HHHH
Q 009181 332 FSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG-QEGY 409 (541)
Q Consensus 332 ~~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg-~~g~ 409 (541)
.. ..-.++..++.|... ++..+|+++.. +++..........|. ....+++++...+. .+.+
T Consensus 210 ~~-~~~~i~~~SfSK~~g~~GlRiG~~v~~-~~~~~~l~~~~~~~~---------------~s~~~q~~~~~~l~~~~~~ 272 (369)
T PRK08153 210 TD-DPNVIRMRTFSKAYGLAGARVGYAIGA-PGTIKAFDKVRNHFG---------------MNRIAQAAALAALKDQAYL 272 (369)
T ss_pred hc-CCCEEEEecchHhccCcchheeeeecC-HHHHHHHHHhhcCCC---------------CCHHHHHHHHHHhcCHHHH
Confidence 11 122466778889942 45558987764 333322111111111 11335555555553 3456
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC--CCHHHHHHHHHhCCceeccC---CCCCeEEEEecCCC
Q 009181 410 LENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV--VDIFEVNDIMSSKGWHLNPL---QRPNSIHICVTLQH 484 (541)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~--~~~~~l~~~l~~~G~~~~~~---~~~~~iRi~~~~~~ 484 (541)
++..+...+.++++.+.|++. ++.+. ++..+++++.... ....++.+.|.++|+.+... ..++++|++++ +
T Consensus 273 ~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~--~ 348 (369)
T PRK08153 273 AEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG--P 348 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCCcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC--C
Confidence 677777888888899989876 66644 5566677776532 35678899999999877322 12468999988 4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 009181 485 VAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 485 ~e~id~~i~~L~~~~~~l~ 503 (541)
.++++++++.|+++++..+
T Consensus 349 ~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 349 DEELDLFAEALPEALEAAR 367 (369)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 6999999999999987654
No 198
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.86 E-value=6.4e-19 Score=164.04 Aligned_cols=291 Identities=14% Similarity=0.135 Sum_probs=220.3
Q ss_pred HHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCC--
Q 009181 179 MTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD-- 256 (541)
Q Consensus 179 ~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~-- 256 (541)
.+++++|++.. -+|.|+-+|-+.+|.++.. +| +-|++...+|++..-|++..|+++..||-.
T Consensus 69 dlaeFlg~D~~--------R~t~GARe~KfavMhal~~-----~g---d~vV~D~~aHYttyvAAEragl~v~eVp~tg~ 132 (382)
T COG1103 69 DLAEFLGMDEV--------RVTAGAREAKFAVMHALCK-----EG---DWVVVDSLAHYTTYVAAERAGLNVAEVPNTGY 132 (382)
T ss_pred HHHHHhCCcee--------eecccchhhHHHHHHHhcc-----CC---CEEEEcCcchHHHHHHHHhcCCeEEecCCCCC
Confidence 58999999864 5899999999999999874 77 999999999999999999999999999975
Q ss_pred CCCccCHHHHHHhhcc-------CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCC
Q 009181 257 KEFRADVKAIKKYINR-------NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP 329 (541)
Q Consensus 257 ~~~~~d~~~Le~~i~~-------~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~ 329 (541)
+++.++++...+.|++ .+.+.+++++....|.+.|.++++++|++||+++++.+||..+-+|
T Consensus 133 Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmp----------- 201 (382)
T COG1103 133 PEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMP----------- 201 (382)
T ss_pred CceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeecccc-----------
Confidence 4899999998888753 3789999999999999999999999999999999999999766554
Q ss_pred CCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccc-cccCCCccCCCc-ccCCCCCchHHHHHHHHHHHhHH
Q 009181 330 FDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAV-TEWSGGLYVSPT-VAGSRPGGLIAGAWAALMSLGQE 407 (541)
Q Consensus 330 ~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~gsr~~~~~a~~~~al~~lg~~ 407 (541)
...+..|+|++..|+||.+-+...+|++.++.. +....+... ..|..- .-. +..+-.|+.++.+.+++-+.-
T Consensus 202 vs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE-~ae~V~r~Sg~~~~~K---EvellGCT~rGapivTlmASfP~V~-- 275 (382)
T COG1103 202 VSGKEIGADFIVGSGHKSMAASAPIGVLAMSEE-WAEIVLRRSGRAFPKK---EVELLGCTVRGAPIVTLMASFPHVV-- 275 (382)
T ss_pred ccccccCCCEEEecCccchhccCCeeEEeehhH-HHHHHHhhcccccccc---eeeeecccccCchHHHHHhcCHHHH--
Confidence 555778999999999999877777897766544 221111111 111110 011 122445666667766664432
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCeEEecC-C-CeeEEEEecCCC---------CHHHHHHHHHhCCceeccCCCCCeE
Q 009181 408 GYLENTKAIMEVSESIQKGIKEIPELFIIGR-P-DMTIVAFGSDVV---------DIFEVNDIMSSKGWHLNPLQRPNSI 476 (541)
Q Consensus 408 g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~-~~~~v~f~~~~~---------~~~~l~~~l~~~G~~~~~~~~~~~i 476 (541)
.-.+..+.-.+.++++.+.|.++.|++.++. | ..-++.|..+.. ..+-+.+.|.++|++....+....+
T Consensus 276 eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~ 355 (382)
T COG1103 276 ERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYF 355 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccCceeEE
Confidence 2234555667789999999999988888875 2 344555654321 2345567888888876655555688
Q ss_pred EEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 477 HICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 477 Ri~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
.+|+-..+.|+++..++++++++++.
T Consensus 356 K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 356 KLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred EEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 99988778899999999999998763
No 199
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=1.1e-19 Score=188.72 Aligned_cols=280 Identities=16% Similarity=0.129 Sum_probs=194.5
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHH--
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA-- 243 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~-- 243 (541)
.|...++|+ .+++++|.+. + +++++|++|+..++.++.. +| ++|+++.+.|.+....+
T Consensus 52 np~~~~lE~----~lA~l~g~~~------~--l~~~sG~~Ai~~~l~~ll~-----~G---D~Vlv~~~~y~~~~~~~~~ 111 (385)
T PRK08574 52 NPTLRPLEE----ALAKLEGGVD------A--LAFNSGMAAISTLFFSLLK-----AG---DRVVLPMEAYGTTLRLLKS 111 (385)
T ss_pred CccHHHHHH----HHHHHhCCCc------E--EEeCCHHHHHHHHHHHHhC-----CC---CEEEEcCCCchhHHHHHHH
Confidence 455665555 8888898752 2 7888999999999887743 67 99999999999977665
Q ss_pred -hhcCCeEEEeeCCCCCccCHHHHHHhhcc-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 244 -QYFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 244 -~~~G~~v~~v~~~~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
...|++++.+. .|++++++++++ +|++|++++|+||+|.+.|+++|+++|+++|+++++|++++.++.
T Consensus 112 ~~~~g~~v~~~~------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~---- 181 (385)
T PRK08574 112 LEKFGVKVVLAY------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLL---- 181 (385)
T ss_pred hhccCcEEEEEC------CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcccc----
Confidence 44588877664 368999999998 899999999999999999999999999999999999999864432
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHH
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
++....|+|+++.++||++.+|.+ .|++++.++++........ ... |.... ...+|.
T Consensus 182 --------~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~-~~~----------g~~~~--p~~a~l 240 (385)
T PRK08574 182 --------YRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR-RRL----------GTIMQ--PFEAYL 240 (385)
T ss_pred --------CChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH-Hhc----------CCCCC--HHHHHH
Confidence 111235789999999999766654 4656666665433211111 111 11111 124555
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEe-cC------------------CCeeEEEEecCCC--CHHHHHH
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFII-GR------------------PDMTIVAFGSDVV--DIFEVND 458 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~------------------~~~~~v~f~~~~~--~~~~l~~ 458 (541)
+++ |.+.+..+.++..+++.++.+.|++.|.++-+ .| ..+++++|.+++. ...++.+
T Consensus 241 ~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~ 318 (385)
T PRK08574 241 VLR--GLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAVLKFLR 318 (385)
T ss_pred HHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHHHHHHH
Confidence 553 45567888899999999999999998876532 21 1256889988631 2233333
Q ss_pred HHHh--CCcee-------------c----------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 459 IMSS--KGWHL-------------N----------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 459 ~l~~--~G~~~-------------~----------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
.|.- .+..+ . ..+. ++.+|+|++. |+.+.++++|+++++.
T Consensus 319 ~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~al~~ 384 (385)
T PRK08574 319 SLKLIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGL---EDVEDLIEDLDQALGS 384 (385)
T ss_pred cCCcceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhc
Confidence 3321 12100 0 0111 2579999998 6788889999988754
No 200
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=1.8e-19 Score=185.70 Aligned_cols=286 Identities=14% Similarity=0.081 Sum_probs=202.9
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ 240 (541)
+.....|....+|+ .++++-|.+. ++++++|+.|+.+++.++.. +| ++|+++...|.+..
T Consensus 56 YsR~~nPt~~~le~----~la~LEg~~~--------a~~~~SGmaAi~~~~~~ll~-----~G---D~Vv~~~~~Yg~t~ 115 (395)
T PRK08114 56 YGRRGTLTHFSLQE----AMCELEGGAG--------CALYPCGAAAVANAILAFVE-----QG---DHVLMTGTAYEPTQ 115 (395)
T ss_pred ccCCCChhHHHHHH----HHHHHhCCCe--------EEEEhHHHHHHHHHHHHHcC-----CC---CEEEEeCCCcHHHH
Confidence 33345577777777 7777776643 27888899999999988742 67 99999999987766
Q ss_pred HHH----hhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcC--CEEEEeCCccc
Q 009181 241 KAA----QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHG--TCLHVDLCLGG 314 (541)
Q Consensus 241 ka~----~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~--i~lhvD~a~gg 314 (541)
..+ +.+|++++.++.. |.++++++|+++|++|++.+|+||+|.+.||++|+++||++| +.++||++++.
T Consensus 116 ~l~~~~l~~~Gi~v~~vd~~-----d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~ 190 (395)
T PRK08114 116 DFCSKILSKLGVTTTWFDPL-----IGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAA 190 (395)
T ss_pred HHHHHHHHhcCcEEEEECCC-----CHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCcc
Confidence 554 5579999998753 789999999999999999999999999999999999999985 99999999865
Q ss_pred chhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCC--CceEEEEecccccccccccccccCCCccCCCcccCCCCCc
Q 009181 315 FVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPK--GTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG 392 (541)
Q Consensus 315 ~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~--g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~ 392 (541)
... ++....|+|++..+.|||++|+. +.|++ +.+++.......... ..|.-..
T Consensus 191 p~~------------~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v-~~~~~~~~~l~~~~~-----------~~G~~~~- 245 (395)
T PRK08114 191 GVL------------FKALDFGIDISIQAGTKYLVGHSDAMIGTA-VANARCWEQLRENSY-----------LMGQMVD- 245 (395)
T ss_pred ccc------------cCHHHcCCcEEEEcCcccccCCCcceeEEE-EcCHHHHHHHHHHHH-----------hccCCCC-
Confidence 432 45566799999999999988885 56754 444432211110000 1121111
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCC-CHH
Q 009181 393 LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVV-DIF 454 (541)
Q Consensus 393 ~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~-~~~ 454 (541)
...+|..+ .|.+.+.-+.++..+++..+++.|++.|.++-+.-| ..++++|..++. +..
T Consensus 246 -p~~a~l~~--rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~ 322 (395)
T PRK08114 246 -ADTAYMTS--RGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDE 322 (395)
T ss_pred -HHHHHHHH--cCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHH
Confidence 33677665 466777888999999999999999999887643222 257999998642 222
Q ss_pred ---HHHHHHHh--CCce-------ec--------c------C-CCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 455 ---EVNDIMSS--KGWH-------LN--------P------L-QRPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 455 ---~l~~~l~~--~G~~-------~~--------~------~-~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
++.+.|.- .+.. +. . . ..++.+|+|++. |++|.++++|+++++.+
T Consensus 323 ~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvGl---Ed~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 323 QLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIGL---EDVDDLIADLAAGFARI 394 (395)
T ss_pred HHHHHHHhCCcceeecccCCccceeccCCchhhhccCChhHhcCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 33333221 1100 00 0 0 112679999997 77888999999988653
No 201
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=4.3e-19 Score=186.32 Aligned_cols=294 Identities=18% Similarity=0.208 Sum_probs=199.1
Q ss_pred cchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HH
Q 009181 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YD 240 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~ 240 (541)
..|....+|+ .++++.|.+. . ++|++|+.|+..++.++.. +| ++|+++.+.|+. +.
T Consensus 62 ~~p~~~~Le~----~lA~leg~~~------a--l~~~sG~~Ai~~al~~ll~-----~G---D~Vlv~~~~y~~t~~~~~ 121 (431)
T PRK08248 62 MNPTTDVFEK----RIAALEGGIG------A--LAVSSGQAAITYSILNIAS-----AG---DEIVSSSSLYGGTYNLFA 121 (431)
T ss_pred CCchHHHHHH----HHHHHhCCCc------E--EEECCHHHHHHHHHHHHhC-----CC---CEEEEccCchhhHHHHHH
Confidence 3455555555 8888888642 2 8999999999999988743 66 899999988865 34
Q ss_pred HHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
..++.+|++++.++.. |+++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++++....
T Consensus 122 ~~~~~~Gv~v~~vd~~-----d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~--- 193 (431)
T PRK08248 122 HTLPKLGITVKFVDPS-----DPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL--- 193 (431)
T ss_pred HHHHhCCEEEEEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc---
Confidence 5567789999999874 89999999999999999999999999999999999999999999999999863221
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEeccccc--cc-----ccccccccCCCccCC---------
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIR--KH-----QFVAVTEWSGGLYVS--------- 382 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~--~~-----~~~~~~~~~~~~~~~--------- 382 (541)
..++ ..|+|+++.+.|||+ ++.| +|.+++.+.+.. .. .......|....+..
T Consensus 194 ------~~pl---~~gaDivv~S~tK~l-gg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (431)
T PRK08248 194 ------LRPI---EHGADIVVHSATKFI-GGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYIT 263 (431)
T ss_pred ------CChh---HcCCCEEEEcCcccc-CCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHH
Confidence 1122 468999999999995 4444 566666443211 00 000011111000000
Q ss_pred ------CcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------
Q 009181 383 ------PTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP----------------- 439 (541)
Q Consensus 383 ------~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~----------------- 439 (541)
....|.+.. ...+|..+ -|.+.+..+.++..+++..+++.|++.|+++-+.-|
T Consensus 264 ~~~~~~~~~~G~~l~--p~~a~l~~--rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~ 339 (431)
T PRK08248 264 KARVQLLRDLGAALS--PFNSFLLL--QGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPK 339 (431)
T ss_pred HHHHHHHHhcCCCCC--HHHHHHHh--cCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcC
Confidence 001122222 12455554 466777889999999999999999999887643222
Q ss_pred -CeeEEEEecCCC--CHHHHHHHHHh--CCcee------------------c-----cCCC-CCeEEEEecCCCHHHHHH
Q 009181 440 -DMTIVAFGSDVV--DIFEVNDIMSS--KGWHL------------------N-----PLQR-PNSIHICVTLQHVAVVDV 490 (541)
Q Consensus 440 -~~~~v~f~~~~~--~~~~l~~~l~~--~G~~~------------------~-----~~~~-~~~iRi~~~~~~~e~id~ 490 (541)
.+++++|.+++. ...++.+.|.- .+..+ + ..+. ++.+|+|++. ||.+.
T Consensus 340 g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---Ed~~d 416 (431)
T PRK08248 340 GQGAILTFGIKGGVEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGT---EAIDD 416 (431)
T ss_pred CCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEecc---CCHHH
Confidence 146899998642 13334333321 11000 0 0111 3679999998 77888
Q ss_pred HHHHHHHHHHHHH
Q 009181 491 FLRDLRESVETVK 503 (541)
Q Consensus 491 ~i~~L~~~~~~l~ 503 (541)
++++|+++++..+
T Consensus 417 L~~Dl~~Al~~~~ 429 (431)
T PRK08248 417 ILDDLRQAIRQSQ 429 (431)
T ss_pred HHHHHHHHHHhhh
Confidence 9999999987643
No 202
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.86 E-value=2.7e-19 Score=184.99 Aligned_cols=281 Identities=18% Similarity=0.141 Sum_probs=196.7
Q ss_pred cchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH--
Q 009181 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA-- 242 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka-- 242 (541)
..|....+|+ .++++.|.+. + ++++||++|+..++.++.. +| ++|+++++.|.+....
T Consensus 48 gnPt~~~lE~----~lA~l~g~~~------~--~~~~sG~~Ai~~al~all~-----~G---D~Vl~~~~~y~~t~~~~~ 107 (377)
T TIGR01324 48 GTLTHFALQD----AMCELEGGAG------C--YLYPSGLAAVTNSILAFVK-----AG---DHVLMVDSAYEPTRYFCD 107 (377)
T ss_pred CCccHHHHHH----HHHHHhCCCc------E--EEECcHHHHHHHHHHHhcC-----CC---CEEEEcCCCcHHHHHHHH
Confidence 3466666666 7788888652 3 7899999999999988743 67 9999999998776543
Q ss_pred --HhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 243 --AQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 243 --~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
++.+|+++..++.+ +.++++++++++|++|++++|+||+|.+.|+++|+++|+++|++++||++|+.+..
T Consensus 108 ~~~~~~gi~v~~~d~~-----~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~--- 179 (377)
T TIGR01324 108 IVLKRMGVDITYYDPL-----IGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLL--- 179 (377)
T ss_pred HHHHhcCcEEEEECCC-----CHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc---
Confidence 35678888887643 23889999999999999999999999999999999999999999999999975443
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHH
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAW 398 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~ 398 (541)
++....|+|++..+.|||+.++.+ .|++ +.+++........ .. ..|.-.. ...+|
T Consensus 180 ---------~~pl~~gaDivv~S~tK~l~G~~d~~gG~v-~~~~~~~~~l~~~--~~---------~~G~~l~--p~~a~ 236 (377)
T TIGR01324 180 ---------FKPLEHGVDISIQAGTKYLVGHSDIMIGTV-VANARTWDQLREH--SY---------LMGQMVD--ADDAY 236 (377)
T ss_pred ---------cCccccCceEEEecCceeccCCCCceEEEE-EeCHHHHHHHHHH--HH---------HhCCCCC--HHHHH
Confidence 122356899999999999776655 4654 4444433221100 00 1111111 23667
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeE-EecC----------------CCeeEEEEecCCCC---HHHHHH
Q 009181 399 AALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELF-IIGR----------------PDMTIVAFGSDVVD---IFEVND 458 (541)
Q Consensus 399 ~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-v~~~----------------~~~~~v~f~~~~~~---~~~l~~ 458 (541)
..++ |.+.+..+.++..+++..+++.|++.|.++ +..| ...++++|.+++.+ ..++.+
T Consensus 237 ~~~r--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~ 314 (377)
T TIGR01324 237 TTLR--GLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLD 314 (377)
T ss_pred HHHh--hhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHH
Confidence 7664 445666778888999999999999988774 3322 12578999986522 345555
Q ss_pred HHHhCCc----------ee-cc--C---------CCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 459 IMSSKGW----------HL-NP--L---------QRPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 459 ~l~~~G~----------~~-~~--~---------~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
.|.-.+. .. .. . -.++.+|+|++. ||.|.++++|+++++.
T Consensus 315 ~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGl---E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 315 HLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGL---ENVDDLKADLKAGFEA 376 (377)
T ss_pred hCCcceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCC---CCHHHHHHHHHHHHhc
Confidence 5543221 01 00 0 012579999998 6788888999888764
No 203
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.86 E-value=1.5e-19 Score=183.93 Aligned_cols=315 Identities=18% Similarity=0.150 Sum_probs=228.3
Q ss_pred HHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC
Q 009181 144 HFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (541)
Q Consensus 144 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G 223 (541)
+.+.+.+.+..+.... .......|...+..++.+.+++++|.+.. ++.++|-.||..++.++.. ++
T Consensus 58 ~~~a~~~~~~~~g~g~-~gsR~i~G~~~~h~~LE~~lA~f~g~e~a--------l~f~SGy~AN~~~i~~l~~-----~~ 123 (388)
T COG0156 58 LIEAAKAAIRRYGVGA-GGSRLISGTSDLHVELEEELADFLGAEAA--------LLFSSGFVANLGLLSALLK-----KG 123 (388)
T ss_pred HHHHHHHHHHHhCCCC-CCcCcccCCcHHHHHHHHHHHHHhCCCcE--------EEEcccchhHHHHHHHhcC-----CC
Confidence 3444455555542222 23334456667777788899999999853 5666678888888888764 45
Q ss_pred CCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc------CceEEEeecCCCCCccccCHHHHHH
Q 009181 224 ITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDPIQELGE 297 (541)
Q Consensus 224 i~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~i~~I~~ 297 (541)
|.|+..+..|.|+...+++.+++++..+.+ |+++||+.+.+ +.++|+.....++.|.+.||++|.+
T Consensus 124 ---dli~~D~lnHASiidG~rls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~ 195 (388)
T COG0156 124 ---DLIFSDELNHASIIDGIRLSRAEVRRFKHN-----DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVE 195 (388)
T ss_pred ---cEEEEechhhhhHHHHHHhCCCcEEEecCC-----CHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHH
Confidence 889999999999999999999999999986 99999999976 3689999999999999999999999
Q ss_pred HHHHcCCEEEEeCCcccchhhhhhhcCCC-CCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccC
Q 009181 298 LALSHGTCLHVDLCLGGFVLPFAKKLGYP-IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWS 376 (541)
Q Consensus 298 la~~~~i~lhvD~a~gg~~~~f~~~~g~~-~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~ 376 (541)
++++|+.||+||++|+-+++ ...|.. +..+......+|++..+..|. +|. .|.++..+..+..+.....+.|.
T Consensus 196 L~~ky~a~L~VDEAHa~Gv~---G~~GrG~~e~~g~~~~~vdi~~gTlsKA-lGs--~Gg~v~g~~~~~d~L~~~ar~~i 269 (388)
T COG0156 196 LAEKYGALLYVDEAHAVGVL---GPNGRGLAEHFGLEPEEVDIIVGTLGKA-LGS--SGGYIAGSAALIDYLRNRARPFI 269 (388)
T ss_pred HHHHhCcEEEEEcccccccc---CCCCccHHHHhCCCCccceEEEEEchhh-hcc--cCceeeCcHHHHHHHHHhCCcee
Confidence 99999999999999988776 333322 112322334569999999999 453 33356666655554433333333
Q ss_pred CCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-CHHH
Q 009181 377 GGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV-DIFE 455 (541)
Q Consensus 377 ~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~-~~~~ 455 (541)
.... -+.+..+++.++++.+. ...+..++..++.+++++.++.. ++.+ .+...+++.+...+. ...+
T Consensus 270 fSta--------lpP~~aaa~~~al~~l~--~~~~~r~~L~~~~~~~~~~~~~~-~~~~-~~s~s~I~pv~~gd~~~a~~ 337 (388)
T COG0156 270 FSTA--------LPPAVAAAALAALRILE--EGPERRERLQELAAFFRSLLKAL-GLVL-LPSESPIIPVILGDEERALE 337 (388)
T ss_pred ccCC--------CCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhc-CCcc-CCCCCCeeeeEeCCHHHHHH
Confidence 2221 22233456666776554 44677888888888998666654 5554 355677877766553 5778
Q ss_pred HHHHHHhCCceeccCCCC------CeEEEEecCCCH-HHHHHHHHHHHHH
Q 009181 456 VNDIMSSKGWHLNPLQRP------NSIHICVTLQHV-AVVDVFLRDLRES 498 (541)
Q Consensus 456 l~~~l~~~G~~~~~~~~~------~~iRi~~~~~~~-e~id~~i~~L~~~ 498 (541)
+++.|.++|+.+.....| ..+|+|++..++ +||+++++.|.++
T Consensus 338 ~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 338 ASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred HHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 889999999887665544 579999998887 9999999998864
No 204
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.85 E-value=5.8e-19 Score=184.04 Aligned_cols=324 Identities=16% Similarity=0.155 Sum_probs=204.3
Q ss_pred HHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC
Q 009181 144 HFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (541)
Q Consensus 144 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G 223 (541)
..+.+.+++..+-. +......+.+......++++.+++++|.+.. ++.++|+.++..++.++. ++|
T Consensus 17 ~~~~~~~a~~~~g~-~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~a--------l~~~sG~~a~~~~i~~l~-----~~G 82 (392)
T PLN03227 17 LRQTALESLSHYGC-GSCGPRGFYGTIDAHLELEQCMAEFLGTESA--------ILYSDGASTTSSTVAAFA-----KRG 82 (392)
T ss_pred HHHHHHHHHHHhCC-CCcccccccCChHHHHHHHHHHHHHhCCCcE--------EEecCcHHHHHHHHHHhC-----CCC
Confidence 44555566655432 2222222333333555677799999998732 566666666667777754 377
Q ss_pred CCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhc-----------cCceEEEeecCCCCCccccCH
Q 009181 224 ITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYIN-----------RNTVLIVGSAPGFPHGIIDPI 292 (541)
Q Consensus 224 i~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~-----------~~t~~vv~~~~~~~~G~id~i 292 (541)
++|++++..|+++...+...+++++.++.++- -|.+.+.+.+. +++++|++..+++++|.+.|+
T Consensus 83 ---D~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~--~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l 157 (392)
T PLN03227 83 ---DLLVVDRGVNEALLVGVSLSRANVRWFRHNDM--KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPL 157 (392)
T ss_pred ---CEEEEeccccHHHHHHHHHcCCeEEEeCCCCH--HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCH
Confidence 99999999999999988888888888877521 12333333442 368899999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCC-CCCCCcC-CCCceEEEeCCCCCCCCCCCceEEEEecccccccccc
Q 009181 293 QELGELALSHGTCLHVDLCLGGFVLPFAKKLGYP-IPPFDFS-VQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFV 370 (541)
Q Consensus 293 ~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~-~p~~~~~-~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~ 370 (541)
++|.++|++||+++++|++++...+ ...|.. ...+... ..++|+++.+.+|+ ++|.| |+++ .++++......
T Consensus 158 ~~i~~l~~~~g~~livDe~~~~g~~---g~~G~g~~~~~g~~p~~~~Div~~slsk~-~g~~g-g~v~-~~~~~~~~~~~ 231 (392)
T PLN03227 158 KELVALKEEFHYRLILDESFSFGTL---GKSGRGSLEHAGLKPMVHAEIVTFSLENA-FGSVG-GMTV-GSEEVVDHQRL 231 (392)
T ss_pred HHHHHHHHHcCCEEEEECccccccc---CCCCCcHHHHcCCCCCCCceEEEeechhh-hhccC-cEEe-cCHHHHHHHHH
Confidence 9999999999999999999972222 111110 0011111 34789999999998 56654 3333 44443322110
Q ss_pred cccccCCCccCCCcccCCCCCchHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHhhcC--C-------CeEEecCCC
Q 009181 371 AVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL-GQEGYLENTKAIMEVSESIQKGIKEI--P-------ELFIIGRPD 440 (541)
Q Consensus 371 ~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l-g~~g~~~~~~~~~~~a~~l~~~L~~~--~-------~~~v~~~~~ 440 (541)
+..+ .+..++-+ ...+++++..+ ......+..++..++++++++.|++. | ++.+...+.
T Consensus 232 ----~~~~----~~~~~~~~---p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~ 300 (392)
T PLN03227 232 ----SGSG----YCFSASAP---PFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPI 300 (392)
T ss_pred ----hCcC----ccccCCCC---HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCC
Confidence 0000 01111111 12344443333 21224567888899999999999852 2 111222344
Q ss_pred eeEEEEecCCCC----------HHHHHHHHHhCCceeccC----------CCCCeEEEEecCCCH-HHHHHHHHHHHHHH
Q 009181 441 MTIVAFGSDVVD----------IFEVNDIMSSKGWHLNPL----------QRPNSIHICVTLQHV-AVVDVFLRDLRESV 499 (541)
Q Consensus 441 ~~~v~f~~~~~~----------~~~l~~~l~~~G~~~~~~----------~~~~~iRi~~~~~~~-e~id~~i~~L~~~~ 499 (541)
++++.+...+.. ..++.+.|.++|+.+... -.|..+|++++..++ +|+|++++.|++++
T Consensus 301 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~ 380 (392)
T PLN03227 301 SPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAV 380 (392)
T ss_pred CCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 667777764421 247889999999866321 114678999998887 99999999999998
Q ss_pred HHHH
Q 009181 500 ETVK 503 (541)
Q Consensus 500 ~~l~ 503 (541)
+++.
T Consensus 381 ~~~~ 384 (392)
T PLN03227 381 EAIL 384 (392)
T ss_pred HHHH
Confidence 7753
No 205
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.85 E-value=4.6e-19 Score=184.66 Aligned_cols=291 Identities=16% Similarity=0.089 Sum_probs=194.9
Q ss_pred HHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC
Q 009181 176 VIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (541)
Q Consensus 176 v~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~ 255 (541)
+++.+++++|.+. . ++++|||+|+.+++.++.- ++| ++|+++.+.|+++..++...|++++.+++
T Consensus 34 le~~la~~~g~~~------~--v~~~sgt~al~~~l~al~~----~~G---d~Viv~~~~~~~~~~~~~~~G~~~~~~~~ 98 (380)
T TIGR03588 34 FEEALAEYVGAKY------A--VAFNSATSALHIACLALGV----GPG---DRVWTTPITFVATANCALYCGAKVDFVDI 98 (380)
T ss_pred HHHHHHHHHCCCe------E--EEEcCHHHHHHHHHHHcCC----CCC---CEEEeCCcchHHHHHHHHHcCCEEEEEec
Confidence 4447888888753 1 5677899999999988721 256 89999999999999999999999999999
Q ss_pred CC-CCccCHHHHHHhhc----cCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCC
Q 009181 256 DK-EFRADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (541)
Q Consensus 256 ~~-~~~~d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~ 330 (541)
++ ++.+|+++++++++ ++|++|++++ ++|...|+++|.++|++||+++++|++++.+.. +
T Consensus 99 ~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~------------~ 163 (380)
T TIGR03588 99 DPDTGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVDMQAIAALAKKHGLKIIEDASHALGAE------------Y 163 (380)
T ss_pred CCCcCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCCHHHHHHHHHHcCCEEEEECCCcccCc------------c
Confidence 75 78899999999998 7888888665 479999999999999999999999999865432 1
Q ss_pred CcCCCC----ceEEEeCCC--CCCCCCCCceEEEEeccccccccccc-ccccCCCc-----------cCCCcccCCCCCc
Q 009181 331 DFSVQG----VTSISVDVH--KYGLAPKGTSVVLYRNREIRKHQFVA-VTEWSGGL-----------YVSPTVAGSRPGG 392 (541)
Q Consensus 331 ~~~~~g----vdsis~~~h--K~~~~p~g~g~ll~~~~~~~~~~~~~-~~~~~~~~-----------~~~~~~~gsr~~~ 392 (541)
+....| .|..++++| |++..+ ..|++++.++++....... ...+.... +......|....
T Consensus 164 ~~~~~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~- 241 (380)
T TIGR03588 164 GGKPVGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYR- 241 (380)
T ss_pred CCEeCCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccC-
Confidence 111222 388888887 886554 4555677666554321110 00000000 000001111111
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC-----eeEEEEecC---CCCHHHHHHHHHhCC
Q 009181 393 LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD-----MTIVAFGSD---VVDIFEVNDIMSSKG 464 (541)
Q Consensus 393 ~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----~~~v~f~~~---~~~~~~l~~~l~~~G 464 (541)
+...-+++.....+.+.+..++..++++++.+.|+++|++++..++. ...+.+.+. +.+..++.+.|.++|
T Consensus 242 -m~~l~aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~g 320 (380)
T TIGR03588 242 -MTDIQAALGLSQLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAG 320 (380)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCC
Confidence 11222232222345688999999999999999999998877654421 123333332 246789999999999
Q ss_pred ceeccC-----------------CCC-------CeEEEEecCC-CHHHHHHHHHHHHHHH
Q 009181 465 WHLNPL-----------------QRP-------NSIHICVTLQ-HVAVVDVFLRDLRESV 499 (541)
Q Consensus 465 ~~~~~~-----------------~~~-------~~iRi~~~~~-~~e~id~~i~~L~~~~ 499 (541)
+.+... ..| ..+++.++.. +.+|++++++.|++++
T Consensus 321 I~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 321 IGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 643210 012 3456655433 3499999999998763
No 206
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=3.3e-19 Score=186.99 Aligned_cols=287 Identities=13% Similarity=0.109 Sum_probs=190.7
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH----HHHhhcCCeE
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD----KAAQYFNIKL 250 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~----ka~~~~G~~v 250 (541)
++++.++++.|.+.. +++++|+.|+.+++.++. ++| ++|+++...|.+.. +.+..+|+++
T Consensus 73 ~le~~la~l~g~~~~--------v~fsSG~~Ai~~al~~ll-----~~G---d~VI~~~~~y~~t~~~~~~~l~~~Gi~v 136 (437)
T PRK05613 73 ALENRIASLEGGVHA--------VAFASGQAAETAAILNLA-----GAG---DHIVTSPRLYGGTETLFLVTLNRLGIEV 136 (437)
T ss_pred HHHHHHHHHhCCCeE--------EEeCCHHHHHHHHHHHhc-----CCC---CEEEECCCccHHHHHHHHHHHHhcCeEE
Confidence 344588999988521 566666788888887663 366 99999999999864 4557789999
Q ss_pred EEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCC
Q 009181 251 WRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (541)
Q Consensus 251 ~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~ 330 (541)
+.++ +++ |+++++++++++|++|++..++||+|.+.|+++|+++|+++|+++|||++++.+.. +
T Consensus 137 ~~vd-~~~---d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~------------~ 200 (437)
T PRK05613 137 TFVE-NPD---DPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL------------V 200 (437)
T ss_pred EEEC-CCC---CHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc------------c
Confidence 9998 322 89999999999999999999999999999999999999999999999999864432 2
Q ss_pred CcCCCCceEEEeCCCCCCCCCCC--ceEEEEeccccccc---------ccccccccCCCc-----cCC-----------C
Q 009181 331 DFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKH---------QFVAVTEWSGGL-----YVS-----------P 383 (541)
Q Consensus 331 ~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~---------~~~~~~~~~~~~-----~~~-----------~ 383 (541)
+....|+|+++.++||| ++|.| .|.+++.+...... .....+++.... ... .
T Consensus 201 ~p~~~GaDivv~S~~K~-l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (437)
T PRK05613 201 RPLELGADVVVASLTKF-YTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLL 279 (437)
T ss_pred ChHHhCCCEEEeeccce-ecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHH
Confidence 22346899999999999 56654 35555543321100 000000000000 000 0
Q ss_pred cccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC------------------CeeEEE
Q 009181 384 TVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP------------------DMTIVA 445 (541)
Q Consensus 384 ~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~------------------~~~~v~ 445 (541)
...|...+ ...+|..+ -|.+.+.-+.++..+++..+++.|++.|.++-+.-| .+++++
T Consensus 280 ~~~G~~~~--p~~a~l~~--rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~s 355 (437)
T PRK05613 280 RDTGATLS--PFNAWVTA--QGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLS 355 (437)
T ss_pred HhcCCCCC--HHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEE
Confidence 00122222 22566555 466778889999999999999999999887433211 146899
Q ss_pred EecCCC--CHHHHHHHHHh--CCc--------ee-c--------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHH
Q 009181 446 FGSDVV--DIFEVNDIMSS--KGW--------HL-N--------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRE 497 (541)
Q Consensus 446 f~~~~~--~~~~l~~~l~~--~G~--------~~-~--------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~ 497 (541)
|.+++. ...++.+.|.- .+. .. + ..+. ++.+|+|++. |+.+.++++|++
T Consensus 356 f~l~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl---E~~~dLi~Dl~~ 432 (437)
T PRK05613 356 FDIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGI---EDIDDIIADLEG 432 (437)
T ss_pred EEecCCHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHH
Confidence 998642 13333333321 110 00 0 0111 2679999998 678888999998
Q ss_pred HHHH
Q 009181 498 SVET 501 (541)
Q Consensus 498 ~~~~ 501 (541)
+++.
T Consensus 433 Al~~ 436 (437)
T PRK05613 433 GFAA 436 (437)
T ss_pred HHhh
Confidence 8764
No 207
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.85 E-value=2.2e-19 Score=185.63 Aligned_cols=279 Identities=18% Similarity=0.208 Sum_probs=192.5
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HHHH
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDKA 242 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~ka 242 (541)
|....+|+ .++++.|.+.. ++++||++|+..++ ++. ++| ++|+++.+.|++ +...
T Consensus 52 pt~~~le~----~la~l~g~~~~--------~~~~sG~~ai~~~~-~ll-----~~G---d~Vl~~~~~y~~t~~~~~~~ 110 (366)
T PRK08247 52 PTRGVLEQ----AIADLEGGDQG--------FACSSGMAAIQLVM-SLF-----RSG---DELIVSSDLYGGTYRLFEEH 110 (366)
T ss_pred chHHHHHH----HHHHHhCCCcE--------EEEcCHHHHHHHHH-HHh-----CCC---CEEEEecCCcCcHHHHHHHH
Confidence 44444444 89999998642 78889999988765 332 256 899999998886 3455
Q ss_pred HhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 243 AQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 243 ~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
++.+|++++.++.. |+++++++++++|++|++++|+||+|.+.++++|+++|+++|+++++|++|+.... .
T Consensus 111 ~~~~G~~v~~vd~~-----d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~---~- 181 (366)
T PRK08247 111 WKKWNVRFVYVNTA-----SLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVL---Q- 181 (366)
T ss_pred hhccCceEEEECCC-----CHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc---c-
Confidence 66789999998864 89999999999999999999999999999999999999999999999999864332 0
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHH
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~a 400 (541)
. +. ..|+|++..+++|+..++.+ .|+++.+++++....... .... |.... ...+|.+
T Consensus 182 ----~-p~---~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~-~~~~----------g~~~s--~~~a~l~ 240 (366)
T PRK08247 182 ----R-PL---EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYY-QNAA----------GAVLS--PFDSWLL 240 (366)
T ss_pred ----C-ch---hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHH-HHhc----------CCCCC--hHHHHHH
Confidence 1 12 34789999999999665544 565555444433221111 1111 11111 2256776
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-CeeEEEEecCCC-CHHHHHHHHH--hCC--------cee-
Q 009181 401 LMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-DMTIVAFGSDVV-DIFEVNDIMS--SKG--------WHL- 467 (541)
Q Consensus 401 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~~v~f~~~~~-~~~~l~~~l~--~~G--------~~~- 467 (541)
++ +.+.+....++..++++.+.+.|++.|++..+..| ..++++|.+++. ...++.+.+. ..+ ...
T Consensus 241 ~~--~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~~~~~~~~~~~l~~~~~~~slg~~~sl~~~ 318 (366)
T PRK08247 241 IR--GMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQDEEWVNPFLKSLKLITFAESLGGVESFITY 318 (366)
T ss_pred Hh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECCHHHHHHHHHcCCcceEccCCCCCceEEEC
Confidence 65 33456677788899999999999999998855444 788999987531 1112222222 101 010
Q ss_pred cc--------------CCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 468 NP--------------LQR-PNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 468 ~~--------------~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
+. .+. ++.+|+|++. |+++.++++|+++++.
T Consensus 319 p~~~~~~~~~~~~r~~~gi~~~~~R~svGl---E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 319 PATQTHADIPEEIRIANGVCNRLLRFSVGI---ENVEDLIADLKQAFKQ 364 (366)
T ss_pred CcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 00 111 2579999997 7788899999998864
No 208
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=1.1e-18 Score=183.00 Aligned_cols=295 Identities=16% Similarity=0.121 Sum_probs=198.6
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHH----
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK---- 241 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~k---- 241 (541)
.|...++|+ .++++.|.+.. +++++|+.|+..++.++.. +| ++|+++...|.+...
T Consensus 68 ~p~~~~Le~----~lA~l~g~~~a--------v~~sSG~aAi~~al~all~-----~G---d~Vv~~~~~y~~t~~~~~~ 127 (436)
T PRK07812 68 NPTQDVVEQ----RIAALEGGVAA--------LLLASGQAAETFAILNLAG-----AG---DHIVSSPRLYGGTYNLFHY 127 (436)
T ss_pred CchHHHHHH----HHHHHhCCCeE--------EEEccHHHHHHHHHHHHhC-----CC---CEEEEeCCcchHHHHHHHH
Confidence 455555555 88888887642 7888899999999987753 66 899999988877554
Q ss_pred HHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 242 a~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
.+...|++++.++ +. .|+++++++++++|++|++.+++||+|.+.|+++|+++|+++|++++||++++....
T Consensus 128 ~l~~~Gi~v~~vd-d~---~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~---- 199 (436)
T PRK07812 128 TLPKLGIEVSFVE-DP---DDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL---- 199 (436)
T ss_pred HhhcCeEEEEEEC-CC---CCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc----
Confidence 3445788888885 22 289999999999999999999999999999999999999999999999999864332
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEeccccc--ccccc----cccccCCC------c-------c
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIR--KHQFV----AVTEWSGG------L-------Y 380 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~--~~~~~----~~~~~~~~------~-------~ 380 (541)
.+....|+|++..++||++ ++.| .|.+++.+.... ...+. ..+.|..- . .
T Consensus 200 --------~~pl~~GaDivv~S~tK~l-gg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (436)
T PRK07812 200 --------IRPLEHGADIVVHSATKYL-GGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKAR 270 (436)
T ss_pred --------CCchhcCCCEEEEeccccc-CCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHH
Confidence 1223468999999999995 5555 455555433211 10000 00000000 0 0
Q ss_pred -CCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC------------------Ce
Q 009181 381 -VSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP------------------DM 441 (541)
Q Consensus 381 -~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~------------------~~ 441 (541)
......|.+.+. ..+|..+ .|.+.+..+.++..+++..+++.|++.|+++-+.-| .+
T Consensus 271 ~~~~~~~G~~l~p--~~a~l~~--rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~g 346 (436)
T PRK07812 271 VQLLRDLGSAISP--FNAFLIA--QGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTG 346 (436)
T ss_pred HHHHHhcCCCCCH--HHHHHHh--cCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCc
Confidence 000011222222 2556555 577788999999999999999999999887543322 14
Q ss_pred eEEEEecCCC--CHHHHHHHHHh--C----Cc----ee-----c----------cCCC-CCeEEEEecCCCHHHHHHHHH
Q 009181 442 TIVAFGSDVV--DIFEVNDIMSS--K----GW----HL-----N----------PLQR-PNSIHICVTLQHVAVVDVFLR 493 (541)
Q Consensus 442 ~~v~f~~~~~--~~~~l~~~l~~--~----G~----~~-----~----------~~~~-~~~iRi~~~~~~~e~id~~i~ 493 (541)
++++|.+++. ...++.+.|.- . |- .. . ..+. ++.+|+|++. |+.|.+++
T Consensus 347 g~~sf~l~~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl---Ed~~dli~ 423 (436)
T PRK07812 347 AVLSFELAGGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI---EGIDDILA 423 (436)
T ss_pred eEEEEEecCCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHH
Confidence 6899998642 13344444332 1 10 00 0 0121 2579999998 77899999
Q ss_pred HHHHHHHHHHc
Q 009181 494 DLRESVETVKQ 504 (541)
Q Consensus 494 ~L~~~~~~l~~ 504 (541)
+|+++++..++
T Consensus 424 dl~~Al~~~~~ 434 (436)
T PRK07812 424 DLEAGFAAAKA 434 (436)
T ss_pred HHHHHHHhhhc
Confidence 99999886653
No 209
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=1e-18 Score=176.65 Aligned_cols=311 Identities=19% Similarity=0.127 Sum_probs=218.2
Q ss_pred HHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEE
Q 009181 151 ACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMI 230 (541)
Q Consensus 151 ~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi 230 (541)
.+.+.+.++.+.. .|.+.++|+ ++++++|.... +.+++||.|+.++++++- -++| |+||
T Consensus 20 ~v~~vl~sg~i~~--G~~v~~FE~----~~ae~~G~k~a--------va~~sgT~AL~laL~al~----ig~G---DeVI 78 (374)
T COG0399 20 AVQEVLKSGWLTG--GPFVRRFEQ----AFAEYLGVKYA--------VAVSSGTAALHLALLALA----IGPG---DEVI 78 (374)
T ss_pred HHHHHHHcCCeec--ChHHHHHHH----HHHHHhCCCeE--------EEecChHHHHHHHHHhcC----CCCC---CEEE
Confidence 3333344444444 567777777 89999998753 789999999999999764 1366 9999
Q ss_pred ecCCccchHHHHHhhcCCeEEEeeCCC-CCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEe
Q 009181 231 IPVSAHSAYDKAAQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVD 309 (541)
Q Consensus 231 ~~~~~h~s~~ka~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD 309 (541)
+|..++.+...++-+.|++++.|++|+ ++.+|++.+|++|+++|++|+..+- .|...|+++|.++|++||++|+.|
T Consensus 79 ~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl---~G~~~dm~~i~~la~~~~l~vIED 155 (374)
T COG0399 79 VPSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHL---AGQPCDMDAIMALAKRHGLPVIED 155 (374)
T ss_pred ecCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEehh---ccCCCCHHHHHHHHHHcCCeEEEE
Confidence 999999999999999999999999996 7999999999999999999998886 899999999999999999999999
Q ss_pred CCcccchhhhhhhcCCCCCCCCcCCCC----ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCC---ccCC
Q 009181 310 LCLGGFVLPFAKKLGYPIPPFDFSVQG----VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGG---LYVS 382 (541)
Q Consensus 310 ~a~gg~~~~f~~~~g~~~p~~~~~~~g----vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~---~~~~ 382 (541)
+|++-+.. ++-+..| +-++|+-++|.+-+. ..|++++.++++..........-... ....
T Consensus 156 aAqa~Ga~------------y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~ 222 (374)
T COG0399 156 AAQAHGAT------------YKGKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYL 222 (374)
T ss_pred cchhccCe------------ecCcccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccce
Confidence 99753322 2222222 577888888985444 67777777766554322211110000 0001
Q ss_pred CcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCee-----EEEEecCC--CCHHH
Q 009181 383 PTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMT-----IVAFGSDV--VDIFE 455 (541)
Q Consensus 383 ~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-----~v~f~~~~--~~~~~ 455 (541)
....|.... +-.+.+++.....+.+++..++..+++++..+.|++++++.+..++... ...+..++ .+..+
T Consensus 223 ~~~~G~N~r--m~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~ 300 (374)
T COG0399 223 HEELGYNYR--LTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDA 300 (374)
T ss_pred eeecccccC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHH
Confidence 111222222 3356667766677889999999999999999999998876665444322 22233333 46788
Q ss_pred HHHHHHhCCce----ecc---------------CCCC-------CeEEEE-ecCCCHHHHHHHHHHHHHHHH
Q 009181 456 VNDIMSSKGWH----LNP---------------LQRP-------NSIHIC-VTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 456 l~~~l~~~G~~----~~~---------------~~~~-------~~iRi~-~~~~~~e~id~~i~~L~~~~~ 500 (541)
+.+.|.++|+. ..+ ...| ..+.+- .+..+.+|+++.++.|++++.
T Consensus 301 l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 301 LMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred HHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 99999999632 111 0112 223332 233345999999999998874
No 210
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.85 E-value=5.5e-19 Score=183.24 Aligned_cols=280 Identities=15% Similarity=0.127 Sum_probs=194.5
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHH--
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA-- 243 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~-- 243 (541)
.|...++|+ .++++.|.+ + + ++|+||++|+..++.++.. +| ++|+++.+.|.+....+
T Consensus 50 ~p~~~~le~----~lA~l~g~~--~----v--~~~~gg~~Ai~~~l~all~-----~G---D~Vl~~~p~y~~~~~~~~~ 109 (382)
T TIGR02080 50 NPTRDLLQQ----ALAELEGGA--G----A--VVTNTGMSAIHLVTTALLG-----PD---DLLVAPHDCYGGTYRLLNA 109 (382)
T ss_pred CchHHHHHH----HHHHHhCCC--c----E--EEEcCHHHHHHHHHHHHcC-----CC---CEEEEcCCCcHHHHHHHHH
Confidence 344454444 888888842 2 4 8999999999999998753 66 89999999998644432
Q ss_pred --hhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 244 --QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 244 --~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
...|+++..++. .|+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+...
T Consensus 110 ~~~~~~~~v~~~d~-----~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~--- 181 (382)
T TIGR02080 110 LAKKGCFRVLFVDQ-----GDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQ--- 181 (382)
T ss_pred HHhhcCeEEEEECC-----CCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 333566666642 3899999999999999999999999999999999999999999999999999654321
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHH
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
.++ ..|+|++..+++||+.++.+ .|+++.+++++...... .....| .... ...+|.
T Consensus 182 ------~pl---~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~-~~~~~g----------~~~s--p~~a~l 239 (382)
T TIGR02080 182 ------NPL---ALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAW-WANNLG----------VTGG--AFDSYL 239 (382)
T ss_pred ------Cch---hhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHH-HHHccC----------CCCC--HHHHHH
Confidence 112 24679999999999777776 67766666654432211 111111 1111 336677
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCC--CHHHHHHHH
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVV--DIFEVNDIM 460 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~--~~~~l~~~l 460 (541)
+++ |.+.+..+.++..+++..+.+.|++.|.++-+.-| ..++++|.+++. ...++.+.|
T Consensus 240 ~lr--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l 317 (382)
T TIGR02080 240 TLR--GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGL 317 (382)
T ss_pred HHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcC
Confidence 764 55677777889999999999999998887644322 146899998642 123333333
Q ss_pred Hh--CCc--------ee-c--------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 461 SS--KGW--------HL-N--------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 461 ~~--~G~--------~~-~--------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
.- .+. .. + ..+. ++.+|+|++. |+.+.++++|+++++
T Consensus 318 ~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---E~~~dl~~dl~~al~ 380 (382)
T TIGR02080 318 SLFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGL---EDADDLIADLEQGLR 380 (382)
T ss_pred CcceEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 21 110 00 0 0111 2579999997 678888999998875
No 211
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=7.7e-19 Score=179.66 Aligned_cols=268 Identities=16% Similarity=0.170 Sum_probs=189.5
Q ss_pred HHHHHHHHhC---CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEE
Q 009181 176 VIAMTAALLG---NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (541)
Q Consensus 176 v~~~la~l~g---~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~ 252 (541)
+++.+++.++ .++++ + ++|+|+++++..++.++ ++|++++++|+.+..+++..|++++.
T Consensus 61 Lr~aia~~~~~~~~~~~~----i--~it~Ga~~~i~~~~~~~------------d~v~v~~P~y~~~~~~~~~~g~~~~~ 122 (335)
T PRK14808 61 LIEKILSYLDTDFLSKNN----V--SVGNGADEIIYVMMLMF------------DRSVFFPPTYSCYRIFAKAVGAKFLE 122 (335)
T ss_pred HHHHHHHHhCCCCCCcce----E--EEcCCHHHHHHHHHHHh------------CcEEECCCCHHHHHHHHHHcCCeEEE
Confidence 4445555555 66665 6 89999999999999876 35999999999999999999999999
Q ss_pred eeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCc
Q 009181 253 VPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (541)
Q Consensus 253 v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~ 332 (541)
+|.++++.++... + +.++++++++|+||||.+.+.+++.+++ ++++++++|++|..|.- . .. .+...
T Consensus 123 v~~~~~~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~---~--~~-~~~~~- 189 (335)
T PRK14808 123 VPLTKDLRIPEVN----V-GEGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHG---E--SY-VDLLK- 189 (335)
T ss_pred ecCCCcCCCChhH----c-cCCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcC---C--ch-HHHHH-
Confidence 9998877666443 2 3578999999999999999999999998 58999999999976521 0 00 01011
Q ss_pred CCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHH-hHHHHH
Q 009181 333 SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL-GQEGYL 410 (541)
Q Consensus 333 ~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l-g~~g~~ 410 (541)
... -.++..++.|... ++..+|+++.. +++..........|.. + ..+++++...+ ..+.+.
T Consensus 190 ~~~-~vi~~~S~SK~~~l~GlRvG~~v~~-~~~~~~l~~~~~~~~~----------~-----~~~q~a~~~~l~~~~~~~ 252 (335)
T PRK14808 190 KYE-NLAVIRTFSKAFSLAAQRIGYVVSS-EKFIDAYNRVRLPFNV----------S-----YVSQMFAKVALDHREIFE 252 (335)
T ss_pred hCC-CEEEEEechhhccCcccceEEEEeC-HHHHHHHHHhcCCCCC----------C-----HHHHHHHHHHHhCHHHHH
Confidence 011 2456668889843 45568987754 3443322111111111 0 11333333223 234566
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHH
Q 009181 411 ENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDV 490 (541)
Q Consensus 411 ~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~ 490 (541)
+..+...+.++++.+.|++. |+++. ++..+++++..++.+..++.+.|.++|+.+..+ +.++|++++. .++.++
T Consensus 253 ~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~g~f~~~~l~~~~~~~~~~~l~~~Gi~V~~~--~~~~Risi~~--~~~~~~ 326 (335)
T PRK14808 253 ERTKFIVEERERMKSALREM-GYRIT-DSRGNFVFIFMEKEEKERLLEHLRAKNIAVRSF--REGVRITIGK--REENDM 326 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCEEC-CCCCeEEEEeCCCccHHHHHHHHHHCCeEEEEC--CCCeEEecCC--HHHHHH
Confidence 77777788888999999987 77765 457788888876556678999999999887754 4689999874 588899
Q ss_pred HHHHHHH
Q 009181 491 FLRDLRE 497 (541)
Q Consensus 491 ~i~~L~~ 497 (541)
+++.|++
T Consensus 327 ~~~~l~~ 333 (335)
T PRK14808 327 ILKELEV 333 (335)
T ss_pred HHHHHHh
Confidence 9998875
No 212
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.85 E-value=3.8e-19 Score=184.72 Aligned_cols=273 Identities=21% Similarity=0.222 Sum_probs=188.3
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HHHHHhhcCCeE
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDKAAQYFNIKL 250 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~ka~~~~G~~v 250 (541)
++++.+++++|.+. + +++++|++|+..++.++.. +| ++|+++...|.+ +...++.+|+++
T Consensus 58 ~le~~la~l~g~~~------~--~~~~sG~~Ai~~al~al~~-----~G---d~Vl~~~~~~~~t~~~~~~~~~~~g~~v 121 (380)
T TIGR01325 58 AFEERIAALEGAER------A--VATATGMSAIQAALMTLLQ-----AG---DHVVASRSLFGSTVGFISEILPRFGIEV 121 (380)
T ss_pred HHHHHHHHHhCCCc------E--EEECCHHHHHHHHHHHHhC-----CC---CEEEEecCCcchHHHHHHHHHHHhCCEE
Confidence 34458888998852 2 7899999999999988753 66 899998888865 345667789999
Q ss_pred EEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCC
Q 009181 251 WRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (541)
Q Consensus 251 ~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~ 330 (541)
+.++.+ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|++++||++|+.+.. ..++
T Consensus 122 ~~v~~~-----d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~---------~~pl 187 (380)
T TIGR01325 122 SFVDPT-----DLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVL---------QQPL 187 (380)
T ss_pred EEECCC-----CHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc---------CCch
Confidence 999875 89999999999999999999999999999999999999999999999999875432 1122
Q ss_pred CcCCCCceEEEeCCCCCCCCCC-CceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHH
Q 009181 331 DFSVQGVTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGY 409 (541)
Q Consensus 331 ~~~~~gvdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~ 409 (541)
..|+|+++.+++|++.++. ..|.+++.+++........... .|.... ...+|.++ .+.+.+
T Consensus 188 ---~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~-----------~g~~~~--p~~a~~~l--~~l~tl 249 (380)
T TIGR01325 188 ---KLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRH-----------TGPAMS--PFNAWVLL--KGLETL 249 (380)
T ss_pred ---hhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHh-----------hCCCCC--HHHHHHHH--hccCcH
Confidence 3478999999999954442 2333344444433221111110 011111 12456665 355667
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCC-CHHHHHHHHHh--CCcee--
Q 009181 410 LENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVV-DIFEVNDIMSS--KGWHL-- 467 (541)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~-~~~~l~~~l~~--~G~~~-- 467 (541)
..+.++..++++++.+.|++.|+++-+.-| .+++++|.+++. ...++.+.|.- .+..+
T Consensus 250 ~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~f~~~l~~~~~~~s~G~ 329 (380)
T TIGR01325 250 SLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRAAAWKVLDAVELVSITNNLGD 329 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEcccCCC
Confidence 778899999999999999998876643221 256999998631 12333333321 12110
Q ss_pred -------c--------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHH
Q 009181 468 -------N--------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRES 498 (541)
Q Consensus 468 -------~--------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~ 498 (541)
+ ..+. ++.+|+|++. ||.+.++++|+++
T Consensus 330 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~a 379 (380)
T TIGR01325 330 AKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVGL---EDVDDLIADLKRA 379 (380)
T ss_pred CCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHhh
Confidence 0 0111 3689999998 6788888888875
No 213
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.85 E-value=3.4e-19 Score=186.22 Aligned_cols=283 Identities=16% Similarity=0.187 Sum_probs=193.6
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HHH
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDK 241 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~k 241 (541)
.|...++| +.+++++|.+.. +++++|+.|+.+++.++. ++| ++|+++.+.|.. +..
T Consensus 64 ~p~~~~le----~~lA~l~g~~~~--------i~~~sG~~Al~~~l~~ll-----~~G---d~Viv~~~~y~~t~~~~~~ 123 (403)
T PRK07503 64 NPTLALLE----QRMASLEGGEAA--------VALASGMGAITATLWTLL-----RPG---DEVIVDQTLYGCTFAFLHH 123 (403)
T ss_pred CchHHHHH----HHHHHHhCCCcE--------EEEcCHHHHHHHHHHHHc-----CCC---CEEEEccCccchHHHHHHH
Confidence 34455555 489999998642 678888999999888763 266 899999988765 335
Q ss_pred HHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 242 a~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
.+...|++++.++.+ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+..
T Consensus 124 ~~~~~G~~v~~vd~~-----d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~---- 194 (403)
T PRK07503 124 GLGEFGVTVRHVDLT-----DPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL---- 194 (403)
T ss_pred HHhhCCEEEEEeCCC-----CHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc----
Confidence 567789999999875 89999999999999999999999999999999999999999999999999975422
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEeccccccccccc-ccccCCCccCCCcccCCCCCchHHHHH
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVA-VTEWSGGLYVSPTVAGSRPGGLIAGAW 398 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gsr~~~~~a~~~ 398 (541)
..++ ..|+|+++.+++|++.++.+ .|+++ .++++....... ... ..|.+.... .+|
T Consensus 195 -----~~~l---~~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~l~~~~~~~----------~~g~~~s~~--~a~ 253 (403)
T PRK07503 195 -----QRPL---ELGADLVVHSATKYLGGHGDITAGLVV-GGKALADRIRLEGLKD----------MTGAVMSPF--DAF 253 (403)
T ss_pred -----CCch---hhCCCEEEccccccccCCCceeEEEEE-cCHHHHHHHHhhhHHh----------CcCCCCCHH--HHH
Confidence 1122 24789999999999544333 66554 555543322100 011 112222222 456
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCC--CHHHHHHH
Q 009181 399 AALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVV--DIFEVNDI 459 (541)
Q Consensus 399 ~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~--~~~~l~~~ 459 (541)
..++ +.+.+..+.++..++++.+.+.|++.|.++.+..| ..++++|..++. ...++.+.
T Consensus 254 l~l~--~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~ 331 (403)
T PRK07503 254 LLMR--GLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGRRFMNA 331 (403)
T ss_pred HHHc--CcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHHHHHHh
Confidence 5553 55667778888889999999999998877644221 145888887532 12233332
Q ss_pred HHh--CCcee-------------c----------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 460 MSS--KGWHL-------------N----------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 460 l~~--~G~~~-------------~----------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
|.- .+..+ + ..+. ++.+|+|++. |+++.++++|+++++..+
T Consensus 332 l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~Al~~~~ 398 (403)
T PRK07503 332 LQLFARAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGL---EDVADILADLAQALDACA 398 (403)
T ss_pred CCcceeecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEec---CCHHHHHHHHHHHHHHHH
Confidence 221 22100 0 0111 2579999998 678888888888887654
No 214
>PRK06460 hypothetical protein; Provisional
Probab=99.85 E-value=7.3e-19 Score=182.16 Aligned_cols=281 Identities=12% Similarity=0.074 Sum_probs=191.1
Q ss_pred cchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCcc----chHH
Q 009181 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAH----SAYD 240 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h----~s~~ 240 (541)
..|...++|+ .+++++|.+.. +++++|++|+..++.++.. +| ++|+++.+.+ ..+.
T Consensus 43 ~~p~~~~L~~----~lA~l~g~~~~--------v~~~sG~~ai~~~l~al~~-----~G---d~Vl~~~~~~~~ty~~~~ 102 (376)
T PRK06460 43 ANPTVLELTK----KIVELENAEMG--------VAFSSGMGAISTTALALLK-----PG---NSVLVHRDMFGRSYRFFT 102 (376)
T ss_pred CCccHHHHHH----HHHHHhCCCcE--------EEeCCHHHHHHHHHHHHhC-----CC---CEEEEecCCcCcHHHHHH
Confidence 3455555554 88999998642 4556678999988887743 66 8999987644 3456
Q ss_pred HHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
..++..|++++.++.+ +.+.+++.++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.+..
T Consensus 103 ~~~~~~G~~v~~~~~~-----~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~--- 174 (376)
T PRK06460 103 DYLKNWGVNVDASNPG-----SDNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN--- 174 (376)
T ss_pred HHHHhhCcEEEEECCC-----CHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc---
Confidence 7788889999988865 23456666678899999999999999999999999999999999999999874321
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC---ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHH
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG---TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGA 397 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g---~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~ 397 (541)
......++|++..+++|++ ++.+ .|+ ++.++++..........|... . ....+
T Consensus 175 ---------~~~l~~~~divv~S~sK~l-~G~~~~~~G~-~~~~~~l~~~l~~~~~~~g~~-----------~--~~~~a 230 (376)
T PRK06460 175 ---------QKPLELGADIVVHSASKFL-AGHNDVIAGL-AAGYGKLLNVIDQMRRTLGTS-----------L--DPHAA 230 (376)
T ss_pred ---------CChhhcCCCEEEeecceec-cCCCCceEEE-EecCHHHHHHHHHHHHhcCCC-----------C--CHHHH
Confidence 1111346799999999994 4443 665 455555443322112122110 0 12256
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCC--CHHHHHH
Q 009181 398 WAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVV--DIFEVND 458 (541)
Q Consensus 398 ~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~--~~~~l~~ 458 (541)
|.+++ +.+.++.+.+++.++++++.+.|++.|.++-+.-| .+++++|.+++. +..++.+
T Consensus 231 ~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~ 308 (376)
T PRK06460 231 YLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMK 308 (376)
T ss_pred HHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHH
Confidence 66653 56788899999999999999999998877543322 257899998642 2334444
Q ss_pred HHHh--CCcee---------c--------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 459 IMSS--KGWHL---------N--------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 459 ~l~~--~G~~~---------~--------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
.|.- .+..+ + ..+. ++.+|+|++. ||.|.++++|+++++.+
T Consensus 309 ~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 309 SLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI---EDVNDLIEDLDRALSTL 375 (376)
T ss_pred hCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 4321 11000 0 0111 2679999997 77888899999888653
No 215
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.85 E-value=3.2e-19 Score=187.27 Aligned_cols=324 Identities=14% Similarity=0.077 Sum_probs=209.6
Q ss_pred HHHHHHHHHHhhcc-cCCCCcccchHHHHHHHHHHHHHHHHhC--CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHh
Q 009181 144 HFSLINEACSMFAH-TNPLHLDIFQSVARFEAEVIAMTAALLG--NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRN 220 (541)
Q Consensus 144 ~~~~~~~~~~~~~~-~n~~~~~~~~~~~~~e~ev~~~la~l~g--~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~ 220 (541)
..+.+.+++..... ....+|....|..++.+.+.+|+.+..+ .++++ +....|.|+++|+..++.+++...
T Consensus 48 ~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~----v~~~~t~G~~~al~~~~~~l~~~~-- 121 (404)
T PTZ00376 48 VLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKR----IATVQALSGTGALRLGFEFLKRFL-- 121 (404)
T ss_pred hhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCe----EEEeeccCcchHHHHHHHHHHHhc--
Confidence 34555666544332 2335666677888888877777754433 23443 511159999999998877654222
Q ss_pred hcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCC--CCCccCHHHHHHhhc---cCceEEEeecCCCCCccccC---H
Q 009181 221 KRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD--KEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP---I 292 (541)
Q Consensus 221 ~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~--~~~~~d~~~Le~~i~---~~t~~vv~~~~~~~~G~id~---i 292 (541)
.+| ++|++++++|+.+...++..|++++.+|+. +++.+|++.+++++. +++.++++++|+||||.+.+ +
T Consensus 122 ~~G---d~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~ 198 (404)
T PTZ00376 122 PAG---TTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQW 198 (404)
T ss_pred CCC---CEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHH
Confidence 366 999999999999999999999999999994 358899999999985 35688889999999999976 6
Q ss_pred HHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCC-CCCCceEEE--Eecccccccc-
Q 009181 293 QELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGL-APKGTSVVL--YRNREIRKHQ- 368 (541)
Q Consensus 293 ~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~-~p~g~g~ll--~~~~~~~~~~- 368 (541)
++|+++|++|++++++|++|..+..............+... ..-.++..++.|... .+..+|+++ ..++++....
T Consensus 199 ~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~ 277 (404)
T PTZ00376 199 KEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAER-GVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVL 277 (404)
T ss_pred HHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhc-CCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHH
Confidence 68888999999999999999876541000000000001101 112356668889944 455689875 3555432211
Q ss_pred --cc--cccccCCCccCCCcccCCCCCchHHHHHHHHHHHhH--------HHHHHHHHHHHHHHHHHHHHhhcCC---Ce
Q 009181 369 --FV--AVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ--------EGYLENTKAIMEVSESIQKGIKEIP---EL 433 (541)
Q Consensus 369 --~~--~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~--------~g~~~~~~~~~~~a~~l~~~L~~~~---~~ 433 (541)
.. ....|.. ....+++++...+.. +..++..+++.++++.+.+.|++.. ++
T Consensus 278 ~~~~~~~~~~~~~--------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 343 (404)
T PTZ00376 278 SQLKLIIRPMYSS--------------PPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDW 343 (404)
T ss_pred HHHHHHHhhhcCC--------------CchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 00 1111111 012345555554532 1244556677888899999998862 24
Q ss_pred EEecCCCeeEEEEecCCCCHHHHHHHHHhC-CceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 434 FIIGRPDMTIVAFGSDVVDIFEVNDIMSSK-GWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 434 ~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~-G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
....+....++++... .++++.|.++ |+.+... . |++++..+.+++++++++|++++.
T Consensus 344 ~~~~p~gg~f~~~~~~----~~~~~~L~~~~~v~v~p~----~-Ris~~~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 344 EHIINQIGMFSFTGLT----KEQVERLIEKYHIYLLDN----G-RISVAGLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred cccccCceEEEecCCC----HHHHHHHHHhCCEeecCC----C-eEEEeccCHHhHHHHHHHHHHHHh
Confidence 4443333334444432 4778888877 7655432 2 999986677999999999998875
No 216
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.85 E-value=7.9e-19 Score=186.13 Aligned_cols=310 Identities=15% Similarity=0.125 Sum_probs=223.6
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ 240 (541)
..+....|...+.+++.+++....|..... ++| ++|+|+++|+.++++++.+ +| |.|++.+++|+...
T Consensus 126 ~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~--~~I--iiT~G~q~al~l~~~~l~~-----pG---d~v~vE~PtY~~~~ 193 (459)
T COG1167 126 LQYGPTAGLPELREAIAAYLLARRGISCEP--EQI--VITSGAQQALDLLLRLLLD-----PG---DTVLVEDPTYPGAL 193 (459)
T ss_pred hcCCCCCCcHHHHHHHHHHHHHhcCCccCc--CeE--EEeCCHHHHHHHHHHHhCC-----CC---CEEEEcCCCcHHHH
Confidence 445555777888888888888666765332 137 9999999999999998875 77 99999999999999
Q ss_pred HHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc-Cc-eEEEeecCCCCCccccCHH---HHHHHHHHcCCEEEEeCCcccc
Q 009181 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYINR-NT-VLIVGSAPGFPHGIIDPIQ---ELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~-~t-~~vv~~~~~~~~G~id~i~---~I~~la~~~~i~lhvD~a~gg~ 315 (541)
.+++.+|++++.||+|++| +|+++|++++.. ++ .+.+....+||||.+.+++ +|.++|++|++|++.|..||-+
T Consensus 194 ~~~~~~g~~~~~vp~d~~G-~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el 272 (459)
T COG1167 194 QALEALGARVIPVPVDEDG-IDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGEL 272 (459)
T ss_pred HHHHHcCCcEEecCCCCCC-CCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhh
Confidence 9999999999999999766 899999999986 34 4566667789999999865 8999999999999999999866
Q ss_pred hhhhhhhcCCCCCC-CCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccc-cccccccCCCccCCCcccCCCCCch
Q 009181 316 VLPFAKKLGYPIPP-FDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQ-FVAVTEWSGGLYVSPTVAGSRPGGL 393 (541)
Q Consensus 316 ~~~f~~~~g~~~p~-~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gsr~~~~ 393 (541)
.. .+.+.|+ ......+-.+...++.|.++...++||++...+-..... .....+ ...+
T Consensus 273 ~~-----~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~~~~k~~~~----------~~~s----- 332 (459)
T COG1167 273 RY-----DGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKLLRLKQAAD----------LGPS----- 332 (459)
T ss_pred hc-----CCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHHHHHHHHHHHHhc----------CCCC-----
Confidence 44 1111221 223334567888899999988899998776543222111 000000 0011
Q ss_pred HHHHHHHHHHHh----HHHHHHHHHHHHHHHHHHHHHhhcC-C-CeEEecCCCeeEEEEecCCC-CHHHHHHHHHhCCce
Q 009181 394 IAGAWAALMSLG----QEGYLENTKAIMEVSESIQKGIKEI-P-ELFIIGRPDMTIVAFGSDVV-DIFEVNDIMSSKGWH 466 (541)
Q Consensus 394 ~a~~~~al~~lg----~~g~~~~~~~~~~~a~~l~~~L~~~-~-~~~v~~~~~~~~v~f~~~~~-~~~~l~~~l~~~G~~ 466 (541)
...+.+....+. ...++++.+...+..+.+.+.|++. + .+.+..+..+.++|+..++. +..++.+.+.++|..
T Consensus 333 ~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~~~~l~~~a~~~gv~ 412 (459)
T COG1167 333 SLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGIDARELLAAALEKGVV 412 (459)
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCCCHHHHHHHHHHCCCE
Confidence 112222222232 3345555666666788888888875 4 45555555567778887765 888999999999876
Q ss_pred eccCC--------CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 467 LNPLQ--------RPNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 467 ~~~~~--------~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
+...+ ..+++|++++..+.+++++.++.|.+++++..
T Consensus 413 i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 413 VTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred EEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 54411 23589999999888999999999999987764
No 217
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.85 E-value=4.9e-19 Score=184.78 Aligned_cols=279 Identities=18% Similarity=0.181 Sum_probs=193.6
Q ss_pred cchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HH
Q 009181 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YD 240 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~ 240 (541)
..|...++|+ .++++.|.+. . +++++|+.|+..++.++.. +| ++|+++...|.. +.
T Consensus 68 ~~p~~~~le~----~lA~l~g~~~------a--l~~~sG~~Ai~~~l~all~-----~G---d~Vl~~~~~~~~t~~~~~ 127 (403)
T PRK07810 68 GNPTVSMFEE----RLRLIEGAEA------C--FATASGMSAVFTALGALLG-----AG---DRLVAARSLFGSCFVVCN 127 (403)
T ss_pred CCchHHHHHH----HHHHHhCCCc------E--EEECChHHHHHHHHHHHhC-----CC---CEEEEccCCcchHHHHHH
Confidence 3455555554 8899998762 2 7899999999998887643 66 899999876633 45
Q ss_pred HHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
..++.+|++++.++.+ |+++++++++++|++|++++|+||+|.+.|+++|+++|+++|++++||++|+.+..
T Consensus 128 ~~~~~~G~~v~~vd~~-----d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~--- 199 (403)
T PRK07810 128 EILPRWGVETVFVDGE-----DLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLL--- 199 (403)
T ss_pred HHHHHcCcEEEEECCC-----CHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCcccc---
Confidence 5677789999999864 99999999999999999999999999999999999999999999999999874432
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC---ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHH
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG---TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGA 397 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g---~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~ 397 (541)
.+....|+|++..+.||++ ++.| .|+++. +++........... ..|.... ...+
T Consensus 200 ---------~~~~~~gaDivv~S~tK~l-~g~g~~~gG~v~~-~~~~~~~~l~~~~~----------~~g~~~s--~~~a 256 (403)
T PRK07810 200 ---------QRGLPLGADVVVYSGTKHI-DGQGRVLGGAILG-DREYIDGPVQKLMR----------HTGPALS--AFNA 256 (403)
T ss_pred ---------CChhhcCCcEEEccCCcee-cCCcCceeEEEEe-ChHHHHHHHHHHHH----------HhCCCCC--HHHH
Confidence 1112347899999999994 5555 465554 44332211100000 0111111 2356
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEec-C-----C-----------CeeEEEEecCCC---CH---H
Q 009181 398 WAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIG-R-----P-----------DMTIVAFGSDVV---DI---F 454 (541)
Q Consensus 398 ~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~-----~-----------~~~~v~f~~~~~---~~---~ 454 (541)
|.++ .+.+.+..+.++..+++.++.+.|++.|+++-+. | | ..++++|.+++. .. .
T Consensus 257 ~l~l--~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~ 334 (403)
T PRK07810 257 WVLL--KGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAF 334 (403)
T ss_pred HHHH--hccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHH
Confidence 6665 4567788999999999999999999998876443 2 1 256899988642 22 3
Q ss_pred HHHHHHHh--CC--------cee-c--------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 009181 455 EVNDIMSS--KG--------WHL-N--------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 455 ~l~~~l~~--~G--------~~~-~--------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~ 499 (541)
++.+.|.- .+ ... + ..+. ++-+|+|++. |+++.++++|++++
T Consensus 335 ~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGl---E~~~dli~dl~~Al 402 (403)
T PRK07810 335 EVLDKLRVIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGL---EDTDDLIADLDRAL 402 (403)
T ss_pred HHHHhCCceEEeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHhh
Confidence 33332221 11 000 0 0111 2579999998 67888889888765
No 218
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.85 E-value=4.8e-19 Score=185.55 Aligned_cols=319 Identities=14% Similarity=0.092 Sum_probs=205.2
Q ss_pred HHHHHHHHhhccc-CCCCcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhc
Q 009181 146 SLINEACSMFAHT-NPLHLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKR 222 (541)
Q Consensus 146 ~~~~~~~~~~~~~-n~~~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~ 222 (541)
..+.+++...... ...+|....|..++.+.+.+++.+..+. ++++ +..++|+|+++|+.+++.++... .+
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~----i~v~iT~Ga~~al~~~~~~l~~~---~p 119 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGR----VATVQTPGGTGALRVGADFLKRA---FP 119 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCe----EEEEecCCccHHHHHHHHHHHHh---CC
Confidence 4556665555432 2235666778788888777777654332 3332 32378999999999998765310 26
Q ss_pred CCCCCeEEecCCccchHHHHHhhcCCeEEEeeC-C-CCCccCHHHHHHhhc---cCceEEEeecCCCCCccccC---HHH
Q 009181 223 GITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV-D-KEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP---IQE 294 (541)
Q Consensus 223 Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~-~-~~~~~d~~~Le~~i~---~~t~~vv~~~~~~~~G~id~---i~~ 294 (541)
| ++|++++++|+.+..+++..|++++.+|+ + +++.+|++++++++. +++.+++.++|+||||.+.+ +++
T Consensus 120 G---d~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~ 196 (396)
T PRK09257 120 D---AKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDE 196 (396)
T ss_pred C---CeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHH
Confidence 7 99999999999999999999999999998 3 367899999999886 34678888999999999976 678
Q ss_pred HHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCC-CCCceEEEE--eccccccc---c
Q 009181 295 LGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLA-PKGTSVVLY--RNREIRKH---Q 368 (541)
Q Consensus 295 I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~-p~g~g~ll~--~~~~~~~~---~ 368 (541)
|+++|++|++++++|++|+.+....-... ..++.++-. ..-.++..++.|.... +..+|+++. .+++.... .
T Consensus 197 l~~~a~~~~~~ii~De~Y~~l~~~~~~~~-~~~~~~~~~-~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~ 274 (396)
T PRK09257 197 LAELLKERGLIPFLDIAYQGFGDGLEEDA-YGLRAFAAA-GLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQ 274 (396)
T ss_pred HHHHHHhCCcEEEEeccccccccchHHHH-HHHHHHHhc-CCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHH
Confidence 99999999999999999987642100000 000011101 1124667788999432 455898764 23322111 0
Q ss_pred c-c-cccccCCCccCCCcccCCCCCchHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHHHhhcCC---CeEE
Q 009181 369 F-V-AVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG--------QEGYLENTKAIMEVSESIQKGIKEIP---ELFI 435 (541)
Q Consensus 369 ~-~-~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg--------~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~v 435 (541)
+ . ....|... + ...+.++...+. .+.+++..+++.++++.+.+.|++.. ++.+
T Consensus 275 ~~~~~~~~~~~~---------~-----~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~ 340 (396)
T PRK09257 275 LKATIRTNYSNP---------P-----AHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDF 340 (396)
T ss_pred HHHHhhhhcCCC---------c-----HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 0 0 00111110 1 113333333332 23455677788888899999998862 3555
Q ss_pred ecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 009181 436 IGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRES 498 (541)
Q Consensus 436 ~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~ 498 (541)
..+..+..+++.. +...+.+.+.+.|+.+... .|++++..+.+++++++++|+++
T Consensus 341 ~~p~gg~~~w~~l---~~~~~~~l~~~~~V~~~p~-----~ri~~~~~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 341 IARQRGMFSYSGL---TPEQVDRLREEFGVYAVGS-----GRINVAGLNESNIDYVAEAIAAV 395 (396)
T ss_pred ccccceEEEecCC---CHHHHHHHHHcCCEEEcCC-----CeEEEeeCCHHHHHHHHHHHHhh
Confidence 4443444444444 3344445556778766532 29999877789999999999875
No 219
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=7.9e-19 Score=181.85 Aligned_cols=278 Identities=18% Similarity=0.171 Sum_probs=188.5
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH----H
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD----K 241 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~----k 241 (541)
.|...++| +.++++.|.+.. +++++|+.++..++ ++. ++| ++|+++.+.|.+.. .
T Consensus 49 ~p~~~~Le----~~lA~l~g~~~~--------~~~~sG~aai~~~~-~~l-----~~G---d~Viv~~~~y~~~~~~~~~ 107 (377)
T PRK07671 49 NPTRAALE----ELIAVLEGGHAG--------FAFGSGMAAITAVM-MLF-----SSG---DHVILTDDVYGGTYRVMTK 107 (377)
T ss_pred ChHHHHHH----HHHHHHhCCCce--------EEeCCHHHHHHHHH-HHh-----CCC---CEEEECCCccchHHHHHHH
Confidence 34445444 489999987642 56666777776554 332 266 89999999888533 3
Q ss_pred HHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 242 a~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
.+..+|++++.++.. |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.....
T Consensus 108 ~~~~~G~~v~~v~~~-----d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~--- 179 (377)
T PRK07671 108 VLNRFGIEHTFVDTS-----NLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQ--- 179 (377)
T ss_pred HHhcCCeEEEEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccC---
Confidence 445679999998753 899999999999999999999999999999999999999999999999998643321
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHH
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
. ++ ..|+|+++.+++|++.+|.+ .|+++++++++..... ......+ ...+ ...+|.
T Consensus 180 -----~-p~---~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~-~~~~~~g----------~~~~--~~~a~l 237 (377)
T PRK07671 180 -----S-PI---SLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLH-FVQNSTG----------GILG--PQDSWL 237 (377)
T ss_pred -----C-hh---hhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHH-HHHHhhc----------CCCC--HHHHHH
Confidence 1 12 35789999999999766754 5656666655433221 1111111 1111 235666
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC-----------------eeEEEEecCCC-CHHHHHHHHH
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD-----------------MTIVAFGSDVV-DIFEVNDIMS 461 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----------------~~~v~f~~~~~-~~~~l~~~l~ 461 (541)
+++ |...+..+.++..++++.+.+.|++.|++.-+..|. .++++|...+. ...++.+.|.
T Consensus 238 ~~~--~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~ 315 (377)
T PRK07671 238 LLR--GLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETANKVLERLQ 315 (377)
T ss_pred HHc--CcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCCHHHHHHHHHhCC
Confidence 664 445567788889999999999999988875443221 46889988321 1223333332
Q ss_pred --hCCcee---------c--------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 009181 462 --SKGWHL---------N--------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 462 --~~G~~~---------~--------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~ 499 (541)
..+..+ . ..+. ++.+|+|++. ||.+.++++|++++
T Consensus 316 l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al 376 (377)
T PRK07671 316 YFTLAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGI---EDGEDLIEDLAQAL 376 (377)
T ss_pred cceEccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHh
Confidence 111100 0 0111 2579999998 67888889988876
No 220
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.85 E-value=2e-18 Score=163.91 Aligned_cols=328 Identities=16% Similarity=0.148 Sum_probs=241.1
Q ss_pred HHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC
Q 009181 144 HFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (541)
Q Consensus 144 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G 223 (541)
++..+.+++ +-|.++ ..+|.+.++-.++.+-+...|...... .. ++...|+.+...|+--... +|
T Consensus 28 l~~~V~~A~----~~~~lg-h~sPe~~qIm~~v~egikyVFkT~n~~---tf--~isgsGh~g~E~al~N~le-----Pg 92 (385)
T KOG2862|consen 28 LSGRVQEAM----SRPSLG-HMSPEFVQIMDEVLEGIKYVFKTANAQ---TF--VISGSGHSGWEAALVNLLE-----PG 92 (385)
T ss_pred CCHHHHHhh----cCCccc-cCCHHHHHHHHHHHHHHHHHhccCCCc---eE--EEecCCcchHHHHHHhhcC-----CC
Confidence 455555554 233333 247888888899999999998876554 12 5555578888887776654 77
Q ss_pred CCCCeEEecCCccch--HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc-CceEEEeecCCCCCccccC-HHHHHHHH
Q 009181 224 ITRPEMIIPVSAHSA--YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDP-IQELGELA 299 (541)
Q Consensus 224 i~~~~vi~~~~~h~s--~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~-i~~I~~la 299 (541)
|++++-...-.+ +...++.+|++|..|+.+......++.+.+++.. ++.+++++++.+.||+..| ++.+.++|
T Consensus 93 ---d~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc 169 (385)
T KOG2862|consen 93 ---DNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELC 169 (385)
T ss_pred ---CeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHh
Confidence 999888877766 4566789999999999888888999999999986 4789999999999999999 78899999
Q ss_pred HHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccc---c-c--ccccc
Q 009181 300 LSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRK---H-Q--FVAVT 373 (541)
Q Consensus 300 ~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~---~-~--~~~~~ 373 (541)
++|++.++||.+. .+| ..+|.+..+|||+.-...+|.+.+|.|.+.+.+.++.... . + ...+-
T Consensus 170 ~k~~~lllVD~Va---------Slg--gt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yF 238 (385)
T KOG2862|consen 170 HKHEALLLVDTVA---------SLG--GTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYF 238 (385)
T ss_pred hcCCeEEEEechh---------hcC--CccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEE
Confidence 9999999999994 333 3368889999999999999999999999987666553211 1 1 11111
Q ss_pred c--cCC---CccCCCc-ccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC----eeE
Q 009181 374 E--WSG---GLYVSPT-VAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD----MTI 443 (541)
Q Consensus 374 ~--~~~---~~~~~~~-~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~----~~~ 443 (541)
+ |.+ +...++. ..-+.+-.++.++.+|+..+-++|+++.+++..+++++++..|++. |++.....+ ..+
T Consensus 239 d~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptv 317 (385)
T KOG2862|consen 239 DILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTV 317 (385)
T ss_pred eHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccCcc
Confidence 1 111 1112222 1234455678899999999999999999999999999999999997 887764322 234
Q ss_pred EEEecC-CCCHHHHHHHHHhCCceeccCC----CCCeEEEEecCCCH--HHHHHHHHHHHHHHHH
Q 009181 444 VAFGSD-VVDIFEVNDIMSSKGWHLNPLQ----RPNSIHICVTLQHV--AVVDVFLRDLRESVET 501 (541)
Q Consensus 444 v~f~~~-~~~~~~l~~~l~~~G~~~~~~~----~~~~iRi~~~~~~~--e~id~~i~~L~~~~~~ 501 (541)
..+..+ ..|..++...+.+++..--..+ .+..+||.+...|. +-++..++.|+..+++
T Consensus 318 ttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 318 TTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred eeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 444443 3588899999888853322211 23589998765553 8999999999888765
No 221
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.84 E-value=1.2e-18 Score=178.48 Aligned_cols=275 Identities=14% Similarity=0.096 Sum_probs=192.4
Q ss_pred HHHHHHHHHHhCCCC-CCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEE
Q 009181 174 AEVIAMTAALLGNKE-KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (541)
Q Consensus 174 ~ev~~~la~l~g~~~-~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~ 252 (541)
.++++.+++.+|.++ ++ + ++|+|+++++...... . .+| + ++++.++|+.+..+++..|++++.
T Consensus 56 ~~L~~~ia~~~~~~~~~~----I--~i~~Gs~e~i~~l~~~-~-----~~g---~-v~v~~P~y~~y~~~~~~~g~~~~~ 119 (339)
T PRK06959 56 DGLAACAARYYGAPDAAH----V--LPVAGSQAAIRALPAL-L-----PRG---R-VGIAPLAYSEYAPAFARHGHRVVP 119 (339)
T ss_pred HHHHHHHHHHhCCCCccc----E--EECcCHHHHHHHHHHh-c-----CCC---e-EEEcCCCcHHHHHHHHHCCCEEEe
Confidence 467889999999975 44 6 8999999999755432 2 134 4 888999999999999999999999
Q ss_pred eeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHH---HHHcCCEEEEeCCcccchhhhhhhcCCCCCC
Q 009181 253 VPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGEL---ALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP 329 (541)
Q Consensus 253 v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~l---a~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~ 329 (541)
++.++ +. +.+.+.++++++||||||.+.+.+++.++ |.+++.++++|++|..|... .. +-.
T Consensus 120 v~~~~------~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~--~s----~~~ 183 (339)
T PRK06959 120 LDEAA------DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA--AS----LAA 183 (339)
T ss_pred ecccc------hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc--cc----chh
Confidence 88753 22 23345689999999999999886665554 56789999999999876421 00 001
Q ss_pred CCcCCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhH-H
Q 009181 330 FDFSVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ-E 407 (541)
Q Consensus 330 ~~~~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~-~ 407 (541)
+. ...+ .++..++.|.. .++..+|+++. ++++..........|... ..++.++...+.. +
T Consensus 184 ~~-~~~~-vi~l~SfSK~~gl~GlRiGy~v~-~~~li~~l~~~~~~~~vs---------------~~~q~a~~~~L~~~~ 245 (339)
T PRK06959 184 HT-DRPG-LVVLRSVGKFFGLAGVRAGFVLA-APALLAALRDALGAWTVS---------------GPARHAVRAAFADAA 245 (339)
T ss_pred cc-CCCC-EEEEecChhhcCCcchheEEEec-CHHHHHHHHHhcCCCCCc---------------HHHHHHHHHHhCcHH
Confidence 11 1233 35677889984 25566898665 444444332222223211 2245555555543 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHH
Q 009181 408 GYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAV 487 (541)
Q Consensus 408 g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~ 487 (541)
..++..+++.+.++++.+.|+++ ++++. +...+++++.. +..++.+.|.++|+.+..++.++++||+++. +.++
T Consensus 246 ~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~~--~~~~l~~~l~~~GI~vr~~~~~~~lRisi~~-~~~e 319 (339)
T PRK06959 246 WQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDDP--RAAALHAALARRGIWTRYFAPPPSVRFGLPA-DEAE 319 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeCC--CHHHHHHHHHhCCeEEEECCCCCeEEEECCC-CHHH
Confidence 45666778888899999999987 77665 23455566553 5678999999999988776667899999853 3479
Q ss_pred HHHHHHHHHHHHHHHHc
Q 009181 488 VDVFLRDLRESVETVKQ 504 (541)
Q Consensus 488 id~~i~~L~~~~~~l~~ 504 (541)
.+++++.|+++++.+..
T Consensus 320 ~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 320 WQRLEDALAECVPTLAA 336 (339)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999887764
No 222
>PRK05939 hypothetical protein; Provisional
Probab=99.84 E-value=1.7e-18 Score=180.29 Aligned_cols=293 Identities=13% Similarity=0.102 Sum_probs=195.9
Q ss_pred ccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch---HH
Q 009181 164 DIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA---YD 240 (541)
Q Consensus 164 ~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s---~~ 240 (541)
...|.+..+|+ .++++.|.+.. +.+++|+.|+..++.++.. +| ++|+++...|++ +.
T Consensus 44 ~g~p~~~~lE~----~la~leg~~~~--------v~~ssG~~Ai~~~l~all~-----~G---d~Vv~~~~~y~~t~~~~ 103 (397)
T PRK05939 44 QGTPTTAALEA----KITKMEGGVGT--------VCFATGMAAIAAVFLTLLR-----AG---DHLVSSQFLFGNTNSLF 103 (397)
T ss_pred CCCHHHHHHHH----HHHHHhCCCeE--------EEeCCHHHHHHHHHHHHcC-----CC---CEEEECCCccccHHHHH
Confidence 34577777776 78888887642 5666679999998887643 67 899999988765 33
Q ss_pred HHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
..+..+|++++.++.. |+++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++++...
T Consensus 104 ~~l~~~G~~v~~v~~~-----d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~---- 174 (397)
T PRK05939 104 GTLRGLGVEVTMVDAT-----DVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPW---- 174 (397)
T ss_pred HHHHhcCCEEEEECCC-----CHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccc----
Confidence 4567789999999874 8999999999999999999999999999999999999999999999999986432
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC-ceEEEEecccccc-------ccccccc--ccCCCccC--CCcccCC
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG-TSVVLYRNREIRK-------HQFVAVT--EWSGGLYV--SPTVAGS 388 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g-~g~ll~~~~~~~~-------~~~~~~~--~~~~~~~~--~~~~~gs 388 (541)
.++....|+|++..++|||+.++.. .|+++..+..... ..+.... .|...... .....|.
T Consensus 175 --------~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 246 (397)
T PRK05939 175 --------LFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGA 246 (397)
T ss_pred --------ccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCC
Confidence 1333456899999999999554322 3444443322110 0000000 00000000 0001122
Q ss_pred CCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCCC
Q 009181 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDVV 451 (541)
Q Consensus 389 r~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~~ 451 (541)
... ...+|..+ .|.+.+..+.++..+++..+++.|++.|.++-+.-| .+++++|.+++.
T Consensus 247 ~~~--p~~a~l~~--rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~ 322 (397)
T PRK05939 247 TLS--SEAAHRIA--IGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADG 322 (397)
T ss_pred CCC--HHHHHHHH--cCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCH
Confidence 111 22556555 467788889999999999999999998876533222 257889988642
Q ss_pred -CHHHHHHHHHh--CCc--------eec---------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 452 -DIFEVNDIMSS--KGW--------HLN---------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 452 -~~~~l~~~l~~--~G~--------~~~---------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
...++.+.+.- .+. ... ..+. ++.+|+|++. ||++.++++|+++++
T Consensus 323 ~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl---Ed~~dLi~dl~~Al~ 395 (397)
T PRK05939 323 IDCFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI---EDEADLIADFEQALD 395 (397)
T ss_pred HHHHHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHh
Confidence 23344444332 110 000 0111 2579999998 678888999998875
No 223
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.84 E-value=1.1e-18 Score=181.01 Aligned_cols=281 Identities=16% Similarity=0.139 Sum_probs=190.7
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH----HH
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY----DK 241 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~----~k 241 (541)
.|....+|+ .++++.|.+.. +++++|+.|+..++. +. ++| ++|+++.+.|.+. ..
T Consensus 49 ~p~~~~Le~----~la~l~g~~~a--------l~~~SG~~Al~~~l~-~l-----~pG---d~Vi~~~~~y~~t~~~~~~ 107 (380)
T PRK06176 49 NPTRFALEE----LIADLEGGVKG--------FAFASGLAGIHAVFS-LF-----QSG---DHVLLGDDVYGGTFRLFDK 107 (380)
T ss_pred ChhHHHHHH----HHHHHhCCCCE--------EEECCHHHHHHHHHH-Hc-----CCC---CEEEEcCCChhHHHHHHHH
Confidence 355555555 88899887642 566777778875543 32 266 8999999888754 34
Q ss_pred HHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 242 a~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
.+...|++++.++.. |+++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++++.+...
T Consensus 108 ~~~~~gi~v~~vd~~-----d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~--- 179 (380)
T PRK06176 108 VLVKNGLSCTIIDTS-----DLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQ--- 179 (380)
T ss_pred HHHhcCeEEEEcCCC-----CHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccC---
Confidence 556779999888764 899999999999999999999999999999999999999999999999998754321
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHH
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
. + ...|+|++..++||++.+|.. .|+++.+++++..... ......|. -.+ ....|.
T Consensus 180 -----~-p---~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~-~~~~~~G~----------~~~--~~~~~l 237 (380)
T PRK06176 180 -----N-P---LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIA-FFQNAIGG----------VLG--PQDSWL 237 (380)
T ss_pred -----C-c---cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHH-HHHHHhcC----------CCC--HHHHHH
Confidence 1 2 245889999999999766653 5655555554332211 11111111 001 224565
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC-----------------eeEEEEecCCC-CHHHHHHHHH
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD-----------------MTIVAFGSDVV-DIFEVNDIMS 461 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----------------~~~v~f~~~~~-~~~~l~~~l~ 461 (541)
.+ .|...+..+.++..+++..+.+.|++.|.+.-+..|. .++++|.+++. ...++.+.|.
T Consensus 238 ~~--~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~ 315 (380)
T PRK06176 238 LQ--RGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLK 315 (380)
T ss_pred HH--hccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCC
Confidence 54 3556667788888889999999999988875443221 46889988642 1223333322
Q ss_pred h--CCce-------e--c--------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 462 S--KGWH-------L--N--------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 462 ~--~G~~-------~--~--------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
- .+.. + + ..+. ++-+|+|++. ||+|.++++|+++++.+
T Consensus 316 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 316 LFILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGI---EHEQDLLEDLEQAFAKI 379 (380)
T ss_pred cceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhhc
Confidence 1 1100 0 0 0111 2579999997 77888999999988653
No 224
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.84 E-value=1.4e-18 Score=183.22 Aligned_cols=311 Identities=14% Similarity=0.088 Sum_probs=201.4
Q ss_pred CcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEe-cCCccch
Q 009181 162 HLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMII-PVSAHSA 238 (541)
Q Consensus 162 ~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~-~~~~h~s 238 (541)
+|....|..++.+.+.+++.+.+|. ++++ | ++|+|+++++.+++.++.+.....+| ++|++ ..++++.
T Consensus 69 ~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~----I--~it~Ga~~al~~~~~~l~~~~~~~~g---d~v~i~~~P~y~~ 139 (416)
T PRK09440 69 NYDGPQGKDELIEALAALLNERYGWNISPQN----I--ALTNGSQSAFFYLFNLFAGRRADGSL---KKILFPLAPEYIG 139 (416)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCChhh----E--EEccChHHHHHHHHHHHhccccCCCC---CeEEEecCCCchh
Confidence 3444456667788788888877775 4444 7 89999999999999887531111234 78999 6999999
Q ss_pred HHHHHhhcC----CeEEEeeCCC---CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEE
Q 009181 239 YDKAAQYFN----IKLWRVPVDK---EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHV 308 (541)
Q Consensus 239 ~~ka~~~~G----~~v~~v~~~~---~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhv 308 (541)
+...+...| ..+..+++++ ++.+|+++|+ +.+++.++++++|+||||++.+ +++|+++|++|++++++
T Consensus 140 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~ 217 (416)
T PRK09440 140 YADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLI 217 (416)
T ss_pred hHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEE
Confidence 888766444 2233344433 3679999997 4677899999999999999987 67889999999999999
Q ss_pred eCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCC
Q 009181 309 DLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGS 388 (541)
Q Consensus 309 D~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs 388 (541)
|++|+.+.-.. .... ..+ ...+-.++..++.|.+.++..+|+++. ++++..........+..+
T Consensus 218 De~Y~~~~~~~-~~~~--~~~---~~~~~vI~~~SfSK~~~pGlRiG~~i~-~~~l~~~~~~~~~~~~~~---------- 280 (416)
T PRK09440 218 DNAYGPPFPGI-IFSE--ATP---LWNPNIILCMSLSKLGLPGVRCGIVIA-DEEIIEALSNMNGIISLA---------- 280 (416)
T ss_pred eCCccccCCCc-chhh--cCc---cccCCeEEEecccccCCCcceEEEEeC-CHHHHHHHHHHHHHhccC----------
Confidence 99997432100 0000 000 011224556788998777778998664 444443221111111100
Q ss_pred CCCchHHHHHHHHHHHhHHHHHH-----HHHHHHHHHHHHHHHhhcC-C--CeEEecCCCeeEEEEecCC--CCHHHHHH
Q 009181 389 RPGGLIAGAWAALMSLGQEGYLE-----NTKAIMEVSESIQKGIKEI-P--ELFIIGRPDMTIVAFGSDV--VDIFEVND 458 (541)
Q Consensus 389 r~~~~~a~~~~al~~lg~~g~~~-----~~~~~~~~a~~l~~~L~~~-~--~~~v~~~~~~~~v~f~~~~--~~~~~l~~ 458 (541)
.....+.++...+....+.+ ..+...++.+.+.+.|.+. + ++.+..+..+.++++.+++ .+..++.+
T Consensus 281 ---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~~~~~~~~ 357 (416)
T PRK09440 281 ---PGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLPITTEELYQ 357 (416)
T ss_pred ---CCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCCCCCHHHHHH
Confidence 11235566655554333332 2333445556666666542 3 3555544456777777764 36788899
Q ss_pred HHHhCCceecc---C--CC-------CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHc
Q 009181 459 IMSSKGWHLNP---L--QR-------PNSIHICVTLQHVAVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 459 ~l~~~G~~~~~---~--~~-------~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~~ 504 (541)
.+.++|+.+.. + +. .+++|+|++. +.+++++++++|+++++...+
T Consensus 358 ~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-~~~~l~~~i~~l~~~~~~~~~ 414 (416)
T PRK09440 358 RLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-DDEEIEKGIAILAEEVEKAYA 414 (416)
T ss_pred HHHHCCEEEechHhhCCCCccccCCcCceEEEEecC-CHHHHHHHHHHHHHHHHHHhh
Confidence 99999976543 2 11 2489999985 569999999999999887654
No 225
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.84 E-value=3.3e-19 Score=183.56 Aligned_cols=278 Identities=13% Similarity=0.113 Sum_probs=190.2
Q ss_pred cchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHh
Q 009181 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQ 244 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~ 244 (541)
..|...++|+ .++++.|.+. + +.++||++|+.+++.++ ++| ++|+++...|......+.
T Consensus 52 ~~p~~~~le~----~lA~leg~~~------~--v~~~sG~aAi~~~l~~l------~~G---D~VI~~~~~yg~~~~~~~ 110 (364)
T PRK07269 52 KNPTRAKLEE----TLAAIESADY------A--LATSSGMSAIVLAFSVF------PVG---SKVVAVRDLYGGSFRWFN 110 (364)
T ss_pred CCccHHHHHH----HHHHHhCCCe------E--EEeCCHHHHHHHHHHHh------CCC---CEEEEecCCcCchHHHHH
Confidence 3466666666 7777777542 3 89999999999988533 267 999999887765433222
Q ss_pred hc----CCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 245 YF----NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 245 ~~----G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
.. ++++ ++..|+++++++|+++|++|++++|+||+|.+.|+++|+++|+++|+++++|++|+....
T Consensus 111 ~~~~~~~~~~-------~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~--- 180 (364)
T PRK07269 111 QQEKEGRFHF-------TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIY--- 180 (364)
T ss_pred HHHhcCcEEE-------EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc---
Confidence 11 2221 233589999999999999999999999999999999999999999999999999754322
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHH
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAW 398 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~ 398 (541)
......|+|+++.|.||++.++.. .|+++.+++++.+.... .... .|.... ...+|
T Consensus 181 ---------~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~-~~~~----------~G~~~s--~~~a~ 238 (364)
T PRK07269 181 ---------QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY-NLNT----------TGAVLS--PFDSY 238 (364)
T ss_pred ---------CCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH-HHHH----------hCCCCC--HHHHH
Confidence 111245889999999999655554 57666666654332211 1111 111112 23666
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeE-EecCCCeeEEEEecCCC-CHHHHHHHHHhC--C--------ce
Q 009181 399 AALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELF-IIGRPDMTIVAFGSDVV-DIFEVNDIMSSK--G--------WH 466 (541)
Q Consensus 399 ~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-v~~~~~~~~v~f~~~~~-~~~~l~~~l~~~--G--------~~ 466 (541)
.++ .|.+.+..+.++..++++++.+.|++.|+++ +..|+..++++|...+. ...++.+.+.-- + ..
T Consensus 239 l~~--~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~ 316 (364)
T PRK07269 239 LLM--RGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLI 316 (364)
T ss_pred HHH--cCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEe
Confidence 666 4556689999999999999999999998865 44577789999997531 122333332211 1 01
Q ss_pred e-c--------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 467 L-N--------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 467 ~-~--------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
. + ..+. ++.+|+|++. |+++.++++|+++++
T Consensus 317 ~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl---E~~~dli~dl~~al~ 363 (364)
T PRK07269 317 TYPTTQTHADIPAEVRHSYGLTDDLLRLSIGI---EDARDLIADLKQALE 363 (364)
T ss_pred eCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHhc
Confidence 0 0 0111 3679999997 678888999988763
No 226
>PRK05839 hypothetical protein; Provisional
Probab=99.84 E-value=1.8e-18 Score=179.74 Aligned_cols=310 Identities=17% Similarity=0.130 Sum_probs=202.7
Q ss_pred HHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC
Q 009181 146 SLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (541)
Q Consensus 146 ~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G 223 (541)
..+.+++..... ....|....+..++.+.+.+++++.+|. ++++ | ++|+|+++++..++.++.. .++|
T Consensus 40 ~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~----I--~it~G~~~al~~~~~~~~~---~~~g 109 (374)
T PRK05839 40 KFIQDALKNNAH-LLNKYPKSAGEESLREAQRGFFKRRFKIELKENE----L--IPTFGTREVLFNFPQFVLF---DKQN 109 (374)
T ss_pred HHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcce----E--EEecCcHHHHHHHHHHHhc---CCCC
Confidence 344455443322 2234444456677888888999888884 4554 7 8999999999888877531 1145
Q ss_pred CCCCeEEecCCccchHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHH
Q 009181 224 ITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGEL 298 (541)
Q Consensus 224 i~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~l 298 (541)
+.|+++.+.|+.+...++..|++++.+|.++ ++.+|.++.+ + +++++|++++|+||||.+.+ +++|+++
T Consensus 110 ---d~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~ 183 (374)
T PRK05839 110 ---PTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTLSLEELIEWVKL 183 (374)
T ss_pred ---CEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCcccCHHHHHHHHHH
Confidence 8899999999999999999999999999974 4666655432 3 46899999999999999976 6688888
Q ss_pred HHHcCCEEEEeCCcccchhhhhhhcCCCCCC-CCc------CCCCceEEEeCCCCC-CCCCCCceEEEEecccccccccc
Q 009181 299 ALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP-FDF------SVQGVTSISVDVHKY-GLAPKGTSVVLYRNREIRKHQFV 370 (541)
Q Consensus 299 a~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~-~~~------~~~gvdsis~~~hK~-~~~p~g~g~ll~~~~~~~~~~~~ 370 (541)
|++||+++++|++|+.+... . +.+. ... ...+-.++..++.|. +.++..+|+++. ++++......
T Consensus 184 ~~~~~~~ii~DE~Y~~~~~~---~---~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~-~~~~~~~~~~ 256 (374)
T PRK05839 184 ALKHDFILINDECYSEIYEN---T---PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAG-DASILKKYKA 256 (374)
T ss_pred HHHcCCEEEeccchhhcccC---C---CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEec-CHHHHHHHHH
Confidence 99999999999999865320 0 0111 110 011224667788996 677778998765 4444432211
Q ss_pred cccccCCCccCCCcccCCCCCchHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecC
Q 009181 371 AVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL-GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSD 449 (541)
Q Consensus 371 ~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~ 449 (541)
....+.. ..+ ...+.++...+ ..+.+++..++..++.+.+.+.| ++. .++.+.+++++.+
T Consensus 257 ~~~~~~~--------~~~-----~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l----~~~--~p~gg~fi~~~~~ 317 (374)
T PRK05839 257 YRTYLGC--------ASP-----LPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL----GIT--IPPATFYVWLPVD 317 (374)
T ss_pred HHhhcCC--------CCC-----hHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc----CCC--CCCeeEEEEEeCC
Confidence 1110000 001 11333333223 23445566666666777666655 222 3445667777765
Q ss_pred CCCHHHHHHHHHh-CCceecc---CCC----CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 450 VVDIFEVNDIMSS-KGWHLNP---LQR----PNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 450 ~~~~~~l~~~l~~-~G~~~~~---~~~----~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
+..++.+.|.+ +|+.+.. ++. ++++|+|++. +.+++++.+++|+++++
T Consensus 318 --~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 318 --NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKLEKALEIIKTYLE 373 (374)
T ss_pred --ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHhh
Confidence 45688888865 8876543 222 4899999985 56889999999988764
No 227
>PLN02672 methionine S-methyltransferase
Probab=99.84 E-value=2.1e-18 Score=194.05 Aligned_cols=302 Identities=13% Similarity=0.175 Sum_probs=205.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeE
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKL 250 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v 250 (541)
++...+++|+++.+|++.+. .+++ ++|+|+++++..++.++.+ +| ++|+++.++|+.+..+++..|+++
T Consensus 734 dlr~aLa~~la~~~Gv~~d~-~e~I--Ivt~Gs~elL~lll~aLl~-----pG---D~VLVp~PtY~~Y~~~a~~~Ga~v 802 (1082)
T PLN02672 734 DPRPSILQFIKSNYGFPTDS-CTEF--VYGDTSLALFNKLVLCCVQ-----EG---GTLCFPAGSNGTYVSAAKFLKANF 802 (1082)
T ss_pred HHHHHHHHHHHHHhCcCCCC-CCEE--EEeCCHHHHHHHHHHHHcC-----CC---CEEEEeCCChHHHHHHHHHcCCEE
Confidence 45677899999999987541 0136 8899999999888888764 67 999999999999999999999999
Q ss_pred EEeeCCC--CCccCHHHHHHhhcc-CceEEEeecCC-CCCccccC---HHHHHHHHHHcCCEEEEeCCcccchhhhhhhc
Q 009181 251 WRVPVDK--EFRADVKAIKKYINR-NTVLIVGSAPG-FPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (541)
Q Consensus 251 ~~v~~~~--~~~~d~~~Le~~i~~-~t~~vv~~~~~-~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~ 323 (541)
+.||+++ ++.+|+++|++++++ ++.++++++|+ ||||.+.+ +++|.++|++||++|++|++|+.+.+. ...
T Consensus 803 v~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd--~~~ 880 (1082)
T PLN02672 803 RRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYD--TSG 880 (1082)
T ss_pred EEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccC--CCC
Confidence 9999974 689999999999976 45688999997 99999966 778899999999999999999866541 000
Q ss_pred --CCCCCC----CCcC-CCCceEEEeCCC-CCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHH
Q 009181 324 --GYPIPP----FDFS-VQGVTSISVDVH-KYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIA 395 (541)
Q Consensus 324 --g~~~p~----~~~~-~~gvdsis~~~h-K~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a 395 (541)
..+.++ ++-. ....-++..++. |++.++..+|+++..++++....... ... ..+ ......
T Consensus 881 ~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~-~~~-----s~~------~~~~q~ 948 (1082)
T PLN02672 881 WGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSA-PGL-----SRP------HSTLKY 948 (1082)
T ss_pred CcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHh-hhh-----cCC------CcHHHH
Confidence 000000 0000 001223455777 55566667999777655444322111 000 000 000112
Q ss_pred HHHHHHHHHh------HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEE-ecC------------------C
Q 009181 396 GAWAALMSLG------QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAF-GSD------------------V 450 (541)
Q Consensus 396 ~~~~al~~lg------~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f-~~~------------------~ 450 (541)
++.+++..+. ...+++..+.+.++++++.+.|++. ++++. +|..+++.| ... +
T Consensus 949 Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~-~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~ 1026 (1082)
T PLN02672 949 TIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVL-EPQGGISMVAKPSAYLGKTVKLKSIDGDTGIK 1026 (1082)
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEe-cCCcEEEEEEEccccccccccccccccccccC
Confidence 3333332221 2345667777888999999999987 78765 455554444 321 1
Q ss_pred CCHHHHHHHHHhC-Cceecc---CCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 451 VDIFEVNDIMSSK-GWHLNP---LQRPNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 451 ~~~~~l~~~l~~~-G~~~~~---~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
.+..++.+.|.++ |+.+.. ++.++++|++++. +.+++++.+++|++..+
T Consensus 1027 lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~-~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1027 LDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFAL-EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred CCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 2567889888876 776543 3456899999985 56899999999998654
No 228
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.84 E-value=8.9e-19 Score=182.36 Aligned_cols=335 Identities=15% Similarity=0.150 Sum_probs=224.8
Q ss_pred ceeeeecCCCCcccHHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHH
Q 009181 130 CSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILL 209 (541)
Q Consensus 130 ~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~ 209 (541)
+.+.-|.+-.......+.+.+++..+-. .........+...+..++.+.+++++|.+.. ++.++|..||..
T Consensus 107 FsSndYLGL~~~p~v~~a~~~ai~~yG~-g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~a--------ll~sSGy~AN~~ 177 (476)
T PLN02955 107 FSGNDYLGLSSHPTISNAAANAAKEYGM-GPKGSALICGYTTYHRLLESSLADLKKKEDC--------LVCPTGFAANMA 177 (476)
T ss_pred eeccCccCCCCCHHHHHHHHHHHHHcCC-CCCCcCccccChHHHHHHHHHHHHHHCCCcE--------EEECChHHHHHH
Confidence 4445566555522244555566666532 2233444556667778888899999998753 788889999999
Q ss_pred HHHHHHHHHH-----hhcCC-CCCeEEecCCccchHHHHHhhc----CCeEEEeeCCCCCccCHHHHHHhhcc---CceE
Q 009181 210 AVKSSRDYMR-----NKRGI-TRPEMIIPVSAHSAYDKAAQYF----NIKLWRVPVDKEFRADVKAIKKYINR---NTVL 276 (541)
Q Consensus 210 al~a~r~~~~-----~~~Gi-~~~~vi~~~~~h~s~~ka~~~~----G~~v~~v~~~~~~~~d~~~Le~~i~~---~t~~ 276 (541)
++.++..... .++.. +.+.|+.....|+|+...+++. ++++..++.+ |+++|+++++. +.++
T Consensus 178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~~~~~~~ 252 (476)
T PLN02955 178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYHLNSLLSSCKMKRKV 252 (476)
T ss_pred HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHHHHHHHHhCCCCceE
Confidence 9888631100 00000 1267899999999999999987 5788888887 99999988853 4678
Q ss_pred EEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCC-CCCCCcCCCCceEEEeCCCCCCCCCCCce
Q 009181 277 IVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYP-IPPFDFSVQGVTSISVDVHKYGLAPKGTS 355 (541)
Q Consensus 277 vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~-~p~~~~~~~gvdsis~~~hK~~~~p~g~g 355 (541)
|+.....++.|.+.|+++|.++|++||++|+||++++.+++ ...|.. +..+.. ...+|+++.+..|. +|.. .|
T Consensus 253 Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~---G~~G~G~~e~~g~-~~di~ii~~TLsKA-~G~~-GG 326 (476)
T PLN02955 253 VVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVC---GENGGGVAEEFNC-EADVDLCVGTLSKA-AGCH-GG 326 (476)
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCcee---cCCCCcHHHHhCC-CCCCcEEEEeCccc-hhcc-Cc
Confidence 88888899999999999999999999999999999997766 222221 112222 25679999999999 4433 34
Q ss_pred EEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEE
Q 009181 356 VVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFI 435 (541)
Q Consensus 356 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v 435 (541)
+++. +++..+........+..+. .-+-..+++..++++.+-.+ ....+++.++.+++++.+ |+.+
T Consensus 327 fi~g-s~~~~~~l~~~~~~~ifSt--------alpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~----G~~~ 391 (476)
T PLN02955 327 FIAC-SKKWKQLIQSRGRSFIFST--------AIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS----GVDI 391 (476)
T ss_pred eeec-HHHHHHHHHHhCCCCeecc--------cccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc----CCCC
Confidence 4444 4444332221111111110 11112344555566544322 346677888888888742 4432
Q ss_pred ecCCCeeEEEEecCCC-CHHHHHHHHHhCCceeccCCCC------CeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 436 IGRPDMTIVAFGSDVV-DIFEVNDIMSSKGWHLNPLQRP------NSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 436 ~~~~~~~~v~f~~~~~-~~~~l~~~l~~~G~~~~~~~~~------~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
..+++.+...+. ...++.+.|.++|+.+....+| ..+|++++..|+ +|++++++.|.++.+.+.
T Consensus 392 ----~sPI~pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 392 ----SSPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred ----CCCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 367777766543 5678899999999988766555 369999998887 999999999998866544
No 229
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.84 E-value=6.2e-19 Score=182.14 Aligned_cols=275 Identities=15% Similarity=0.142 Sum_probs=188.0
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHH--
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA-- 243 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~-- 243 (541)
.|....+|+ .++++. .+. . +++++|++|+..++.++. ++| ++|+++.+.|+.+...+
T Consensus 50 ~p~~~~Le~----~lA~l~--~~~-----~--v~~~sG~~Ai~~~l~all-----~~G---d~Vl~~~~~y~~~~~~~~~ 108 (366)
T PRK07582 50 NPTWRALEA----ALGELE--GAE-----A--LVFPSGMAAITAVLRALL-----RPG---DTVVVPADGYYQVRALARE 108 (366)
T ss_pred CccHHHHHH----HHHHHc--CCC-----E--EEECCHHHHHHHHHHHhc-----CCC---CEEEEeCCCcHhHHHHHHH
Confidence 455555555 677776 222 2 677788889998887764 266 89999999998776544
Q ss_pred --hhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 244 --QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 244 --~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
..+|++++.++.++.+. .+.+++.+|++++|+||+|.+.|+++|+++|+++|++++||++|+.+
T Consensus 109 ~l~~~G~~v~~v~~~~~~~--------~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~------ 174 (366)
T PRK07582 109 YLAPLGVTVREAPTAGMAE--------AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATP------ 174 (366)
T ss_pred HHhcCeEEEEEECCCChHH--------HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCc------
Confidence 45799999998764321 33468999999999999999999999999999999999999998532
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHH
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
.+. .+++ .|+|++..++|||+.++.| .|+++.+++++...... ...+.+ .... ...+|.
T Consensus 175 -~~~--~p~~---~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~-~~~~~g----------~~~~--~~~a~l 235 (366)
T PRK07582 175 -LGQ--RPLE---LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVER-WRLLAG----------AIPG--PFEAWL 235 (366)
T ss_pred -ccc--Cchh---cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHH-HHHHhC----------CCCC--HHHHHH
Confidence 111 1333 4789999999999777777 58766655554332211 111111 1111 235676
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEec------CC-----------CeeEEEEecCCCCHHHHHHHHHh
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIG------RP-----------DMTIVAFGSDVVDIFEVNDIMSS 462 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~------~~-----------~~~~v~f~~~~~~~~~l~~~l~~ 462 (541)
+++.+ ..+..+.++..+++..+.+.|++.|.++-+. .| ..++++|.+. +..+..+.+.+
T Consensus 236 ~~r~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--~~~~~~~~~~~ 311 (366)
T PRK07582 236 AHRSL--GTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--DAAAAERFVAA 311 (366)
T ss_pred HHhcc--ccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--CHHHHHHHHHh
Confidence 66444 4567788889999999999999998876443 12 3679999986 45555555555
Q ss_pred CCceec--c-------------CC--C-CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 463 KGWHLN--P-------------LQ--R-PNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 463 ~G~~~~--~-------------~~--~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
.++... + .+ . ++.+|+|++. |+.+.++++|+++++.
T Consensus 312 l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~~ 365 (366)
T PRK07582 312 SRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGI---EDTDDLVADLERALDA 365 (366)
T ss_pred CCcceecccCCCccchhhhHHHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 543211 0 11 1 2579999998 4556677777777654
No 230
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.84 E-value=2.2e-18 Score=180.67 Aligned_cols=287 Identities=20% Similarity=0.194 Sum_probs=187.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc-hHHHHHhhcCC----
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS-AYDKAAQYFNI---- 248 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~-s~~ka~~~~G~---- 248 (541)
.++.++++++++.+..+ ++ ++++||++|+..|+++++.. | +.+++..+.+|+ ....+....|.
T Consensus 88 ~~la~~l~~~~~~~~~~---~v--~~~~sgsea~~~al~~~~~~-----g--~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 155 (398)
T PRK03244 88 IALAERLVELLGAPEGG---RV--FFCNSGAEANEAAFKLARLT-----G--RTKIVAAEGGFHGRTMGALALTGQPAKR 155 (398)
T ss_pred HHHHHHHHHhCCCCCCC---EE--EEeCchHHHHHHHHHHHHHH-----C--CCeEEEECCCcCCccHHHHhccCCcccc
Confidence 45777889988854222 25 89999999999999998752 2 245666554544 43344433332
Q ss_pred --------eEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEeCCcccch
Q 009181 249 --------KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLGGFV 316 (541)
Q Consensus 249 --------~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD~a~gg~~ 316 (541)
++..+|. .|++++++++.+++.+|+++.+++|+|.+.| +++|.++|++||+++++|++++|+.
T Consensus 156 ~~~~~~~~~~~~~~~-----~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g 230 (398)
T PRK03244 156 APFEPLPGGVEHVPY-----GDVDALAAAVDDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIG 230 (398)
T ss_pred cCCCCCCCCceEeCC-----CCHHHHHHhhcCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCc
Confidence 2333333 3899999999888999999999999999987 8999999999999999999998753
Q ss_pred hhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchH
Q 009181 317 LPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLI 394 (541)
Q Consensus 317 ~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~ 394 (541)
. .|. .+.+...+ .|++++ .|.+.++..+|+++.+++ +..... . . ..++..+...
T Consensus 231 r-----~g~---~~~~~~~~~~pDi~t~--sK~l~~G~~ig~~~~~~~-~~~~~~---~----~------~~~~t~~~~~ 286 (398)
T PRK03244 231 R-----TGA---WFAHQHDGVTPDVVTL--AKGLGGGLPIGACLAFGP-AADLLT---P----G------LHGSTFGGNP 286 (398)
T ss_pred c-----cch---HHhhhhhCCCCCEEEE--chhhhCCcccEEEEEcHH-HHhhcc---C----C------CCcCCCCCCH
Confidence 2 110 01111122 366665 498766677898777654 322110 0 0 0111112222
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEec--CCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCC
Q 009181 395 AGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIG--RPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQR 472 (541)
Q Consensus 395 a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~ 472 (541)
.++.+++..+..-.-.+..++..++.+++++.|+++ ++.++. .....++++.++.....++.+.+.++|+.+....
T Consensus 287 ~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~l~~~Gv~~~~~~- 364 (398)
T PRK03244 287 VACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAPVAKAVEAAAREAGFLVNAVA- 364 (398)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEeccHHHHHHHHHHHCCeEEeecC-
Confidence 234444433322112355677778889999999885 222221 1245666666644356788999999998876533
Q ss_pred CCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 473 PNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 473 ~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
++.+|++++..++ +|++++++.|++++++++
T Consensus 365 ~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 365 PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 4789999987554 999999999999997754
No 231
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=1.7e-18 Score=182.05 Aligned_cols=285 Identities=16% Similarity=0.149 Sum_probs=192.1
Q ss_pred HHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH----HHHhhcCCeEE
Q 009181 176 VIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD----KAAQYFNIKLW 251 (541)
Q Consensus 176 v~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~----ka~~~~G~~v~ 251 (541)
+.+.++++.|.+.. +++++|++|+.+++.++.. +| ++|+++...|.+.. ..+..+|++++
T Consensus 68 le~~lA~l~g~~~a--------l~~~SG~~Ai~~al~all~-----pG---d~VIv~~~~y~~t~~~~~~~~~~~G~~v~ 131 (427)
T PRK05994 68 LEERVAALEGGTAA--------LAVASGHAAQFLVFHTLLQ-----PG---DEFIAARKLYGGSINQFGHAFKSFGWQVR 131 (427)
T ss_pred HHHHHHHHhCCCcE--------EEEcCHHHHHHHHHHHHhC-----CC---CEEEEecCcchhHHHHHHHHHHhcCcEEE
Confidence 44488888887642 7889999999999988753 67 89999999998643 44677899999
Q ss_pred EeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 252 RVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
.++.+ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++++.... .+
T Consensus 132 ~vd~~-----d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~------------~~ 194 (427)
T PRK05994 132 WADAD-----DPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL------------IR 194 (427)
T ss_pred EECCC-----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc------------CC
Confidence 99864 89999999999999999999999999999999999999999999999999874332 11
Q ss_pred cCCCCceEEEeCCCCCCCCCCC-ceEEEEeccc--ccc-cc--cccc-cccCCCccCC----------------CcccCC
Q 009181 332 FSVQGVTSISVDVHKYGLAPKG-TSVVLYRNRE--IRK-HQ--FVAV-TEWSGGLYVS----------------PTVAGS 388 (541)
Q Consensus 332 ~~~~gvdsis~~~hK~~~~p~g-~g~ll~~~~~--~~~-~~--~~~~-~~~~~~~~~~----------------~~~~gs 388 (541)
....|+|+++.+.|||+.++.+ .|.+++.... +.. .. +... ....++.... ....|.
T Consensus 195 pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 274 (427)
T PRK05994 195 PIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGP 274 (427)
T ss_pred ccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCC
Confidence 2346899999999999655444 4544553221 100 00 0000 0000110000 000122
Q ss_pred CCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC------------------CeeEEEEecCC
Q 009181 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP------------------DMTIVAFGSDV 450 (541)
Q Consensus 389 r~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~------------------~~~~v~f~~~~ 450 (541)
... -..+|..+ -|.+.+..+.++..+++.++.+.|++.|+++-+.-| .+++++|.+++
T Consensus 275 ~~~--~~~A~l~~--~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~ 350 (427)
T PRK05994 275 AIS--PFNAFLIL--TGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKG 350 (427)
T ss_pred CCC--HHHHHHHH--cCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecC
Confidence 111 12445444 466788999999999999999999999887643222 14689999864
Q ss_pred C--CHHHHHHHHHh--CCc--------ee-----c----------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 451 V--DIFEVNDIMSS--KGW--------HL-----N----------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 451 ~--~~~~l~~~l~~--~G~--------~~-----~----------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
. ...++.+.|.- .+. .. . ..+. ++.+|+|++. ||.+.++++|+++++
T Consensus 351 ~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---E~~~dli~dl~~Al~ 425 (427)
T PRK05994 351 GYEAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI---EDVDDIIADLEQALA 425 (427)
T ss_pred CHHHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc---CCHHHHHHHHHHHHh
Confidence 2 12233333221 110 00 0 0111 2579999998 678888899998875
No 232
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.84 E-value=7.3e-19 Score=179.55 Aligned_cols=270 Identities=15% Similarity=0.158 Sum_probs=190.0
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEe
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v 253 (541)
.++++++++++|.++++ + ++|+|+++++..+..++ . +| .|+++.+.|.++...++..|++++.+
T Consensus 50 ~~lr~~la~~~~~~~~~----i--~~t~G~~~~i~~~~~~l-~-----~g----~vl~~~p~y~~~~~~~~~~g~~~~~~ 113 (330)
T TIGR01140 50 DELRAAAAAYYGLPAAS----V--LPVNGAQEAIYLLPRLL-A-----PG----RVLVLAPTYSEYARAWRAAGHEVVEL 113 (330)
T ss_pred HHHHHHHHHHhCCChhh----E--EECCCHHHHHHHHHHHh-C-----CC----eEEEeCCCcHHHHHHHHHcCCEEEEe
Confidence 35666888889987665 6 89999999988865443 1 33 58899999999999999999999988
Q ss_pred eCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCC
Q 009181 254 PVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (541)
Q Consensus 254 ~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~ 330 (541)
+ |++++++++ +++.++++++|+||+|.+.+ +++|+++|+++|+++++|++|+.+... .. + .
T Consensus 114 ~-------d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~----~~--~--~ 177 (330)
T TIGR01140 114 P-------DLDRLPAAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD----AS--L--A 177 (330)
T ss_pred C-------CHHHHHhhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc----cc--h--h
Confidence 7 889999998 45778999999999999988 667888889999999999999876531 00 1 1
Q ss_pred Cc-CCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHH
Q 009181 331 DF-SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEG 408 (541)
Q Consensus 331 ~~-~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g 408 (541)
+. ...+-+++..+++|++. .+.++|+++..+ ++..........|. . ...++.++...+...+
T Consensus 178 ~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~~~----------~-----s~~~q~~~~~~l~~~~ 241 (330)
T TIGR01140 178 PQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP-ALLARLREALGPWT----------V-----NGPARAAGRAALADTA 241 (330)
T ss_pred hHhccCCCEEEEEecchhhcCchhhhhheeCCH-HHHHHHHhcCCCCC----------c-----hHHHHHHHHHHHhchH
Confidence 11 12244688889999943 334479876654 34332211111111 1 1235555555554433
Q ss_pred -HHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccC---C--CCCeEEEEecC
Q 009181 409 -YLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPL---Q--RPNSIHICVTL 482 (541)
Q Consensus 409 -~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~---~--~~~~iRi~~~~ 482 (541)
.++..++..++.+++.+.|++++.+++. ++...++++..+ +..++.+.|.++|+.+... . .++++|++++.
T Consensus 242 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~--~~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~ 318 (330)
T TIGR01140 242 WQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTP--DAAALHEALARRGILIRDFDNFPGLDPRYLRFALPT 318 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcC--CHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecC
Confidence 4677788888999999999998666654 445566666654 4678999999999765432 1 23689999985
Q ss_pred CCHHHHHHHHHHHH
Q 009181 483 QHVAVVDVFLRDLR 496 (541)
Q Consensus 483 ~~~e~id~~i~~L~ 496 (541)
. .++ ++|+++|+
T Consensus 319 ~-~~~-~~~~~~l~ 330 (330)
T TIGR01140 319 D-EEN-DRLEEALA 330 (330)
T ss_pred H-HHH-HHHHHhhC
Confidence 2 255 88877763
No 233
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=2.7e-18 Score=179.08 Aligned_cols=296 Identities=17% Similarity=0.119 Sum_probs=200.5
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH---
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA--- 242 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka--- 242 (541)
.|.+..+|+ .++++.|... . +.+++|+.|+.+++.++. ++| |+||++...|.+....
T Consensus 60 nPtv~~lE~----~la~leg~~~------a--v~~~SG~aAi~~al~all-----~~G---D~VI~~~~~Y~~T~~~~~~ 119 (432)
T PRK06702 60 NPTLAAFEQ----KLAELEGGVG------A--VATASGQAAIMLAVLNIC-----SSG---DHLLCSSTVYGGTFNLFGV 119 (432)
T ss_pred CcHHHHHHH----HHHHHhCCCc------E--EEECCHHHHHHHHHHHhc-----CCC---CEEEECCCchHHHHHHHHH
Confidence 466666666 8888887753 2 789999999999999874 377 9999999999865554
Q ss_pred -HhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 243 -AQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 243 -~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
+..+|+++..+.. .+|+++++++|+++|++|++.+|+||++.+.|+++|+++|+++|+++++|++++...+
T Consensus 120 ~l~~~Gi~v~~vd~----~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~---- 191 (432)
T PRK06702 120 SLRKLGIDVTFFNP----NLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL---- 191 (432)
T ss_pred HHHHCCCEEEEECC----CCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhh----
Confidence 6778999998854 4799999999999999999999999999999999999999999999999999863322
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEeccc--cccccc--ccc-------cccCC--C--c-----
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNRE--IRKHQF--VAV-------TEWSG--G--L----- 379 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~--~~~~~~--~~~-------~~~~~--~--~----- 379 (541)
.+....|+|++..|..||..|..+ .|+ ++.... +..... ... ..|.. + .
T Consensus 192 --------~~pl~~GADIvv~S~TKy~~Ghsd~l~G~-v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (432)
T PRK06702 192 --------CQAFEHGANIIVHSTTKYIDGHASSLGGI-VIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKA 262 (432)
T ss_pred --------CChhhcCCCEEEEccccccCCCcceeceE-EEeCCCcccccccccccccccccccccchhhccchhhHHHHH
Confidence 223467899999999999655544 343 332111 100000 000 00000 0 0
Q ss_pred c-CCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC------------------C
Q 009181 380 Y-VSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP------------------D 440 (541)
Q Consensus 380 ~-~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~------------------~ 440 (541)
. ......|.+.+ ...+|.+++ |.+.+..+.++..+++..+++.|++.|.++.+.-| .
T Consensus 263 ~~~~~~~~g~~~s--p~~a~l~~r--gL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~ 338 (432)
T PRK06702 263 RVQLLRDYGNCMS--PFNAYISNI--GLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGA 338 (432)
T ss_pred HHHHHHHccCCCC--HHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCC
Confidence 0 00001122222 236776664 55678889999999999999999999887644322 1
Q ss_pred eeEEEEecCCC--CHHHHHHHHHh--CCce------e-------c----------cCCC-CCeEEEEecCCCHHHHHHHH
Q 009181 441 MTIVAFGSDVV--DIFEVNDIMSS--KGWH------L-------N----------PLQR-PNSIHICVTLQHVAVVDVFL 492 (541)
Q Consensus 441 ~~~v~f~~~~~--~~~~l~~~l~~--~G~~------~-------~----------~~~~-~~~iRi~~~~~~~e~id~~i 492 (541)
.++++|.+++. ...++.+.|.- .+.. + . ..+. ++.+|+|++. |+.|.++
T Consensus 339 gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl---Ed~eDLi 415 (432)
T PRK06702 339 SGVLTFGIKGGLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI---EDVSDII 415 (432)
T ss_pred ceEEEEEecCCHHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHH
Confidence 46899998631 12233333321 1100 0 0 0111 2589999998 7789999
Q ss_pred HHHHHHHHHHHcC
Q 009181 493 RDLRESVETVKQN 505 (541)
Q Consensus 493 ~~L~~~~~~l~~~ 505 (541)
++|+++++--+++
T Consensus 416 ~Dl~~Al~~~~~~ 428 (432)
T PRK06702 416 ADLEAALVGGKQH 428 (432)
T ss_pred HHHHHHHhcCccc
Confidence 9999998654443
No 234
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.83 E-value=5.1e-18 Score=178.52 Aligned_cols=303 Identities=10% Similarity=0.091 Sum_probs=198.2
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCC--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
.+|...++...+.+.+.+++.+..|. ++++ | ++|+|+++++.+.+ .+. .+| ++|++++++|+.
T Consensus 70 ~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~----I--~it~Ga~~al~~l~-~~~-----~~g---d~V~v~~P~Y~~ 134 (409)
T PRK07590 70 RGYGPEQGYDFLREKIAENDYQARGCDISADE----I--FISDGAKCDTGNIL-DIF-----GPD---NTIAVTDPVYPV 134 (409)
T ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCcCChhh----E--EECCCHHHHHHHHH-Hhc-----CCC---CEEEEeCCCCcc
Confidence 44555677777887777777666554 4554 7 89999999988743 222 266 899999999999
Q ss_pred HHHHHhhcCCe-----------EEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHc
Q 009181 239 YDKAAQYFNIK-----------LWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSH 302 (541)
Q Consensus 239 ~~ka~~~~G~~-----------v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~ 302 (541)
+...++..|.+ ++.+|+++ ++..|.+ +++++++++++|+||||.+.+ +++|+++|++|
T Consensus 135 ~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~ 208 (409)
T PRK07590 135 YVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKEN 208 (409)
T ss_pred hHHHHHHcCCcccccccccccceeEeecccccCCcccCc------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHc
Confidence 99999999987 89999874 3444432 257899999999999999977 56788889999
Q ss_pred CCEEEEeCCcccchhhhhhhcCCCCCCC-CcC-CCCceEEEeCCCCCC-CCCCCceEEEEecccccccc-----cccccc
Q 009181 303 GTCLHVDLCLGGFVLPFAKKLGYPIPPF-DFS-VQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQ-----FVAVTE 374 (541)
Q Consensus 303 ~i~lhvD~a~gg~~~~f~~~~g~~~p~~-~~~-~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~-----~~~~~~ 374 (541)
++++++|++|+.+.. +. .. .+.+ ... ..+..++..++.|.. .++..+|+++..++ +.... ......
T Consensus 209 ~~~iI~De~Y~~~~~---~~-~~-~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~-li~~~~~~~~~~~~~~ 282 (409)
T PRK07590 209 GSLILFDAAYEAFIS---DP-SL-PHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKE-LKGKTSDGEGVSLNSL 282 (409)
T ss_pred CeEEEEEccchhhcc---CC-CC-CcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHH-HhhhccccchhhhHHH
Confidence 999999999987643 11 00 1111 111 112345567889985 36667998776443 33210 000000
Q ss_pred cCCCccCCCcccCCCCCchHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-
Q 009181 375 WSGGLYVSPTVAGSRPGGLIAGAWAALMSL---GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV- 450 (541)
Q Consensus 375 ~~~~~~~~~~~~gsr~~~~~a~~~~al~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~- 450 (541)
|.. ...... .+.....+.++...+ +...+++..+...+.++++.+.|++. ++++..+....++++++++
T Consensus 283 ~~~--~~~~~~----~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~ 355 (409)
T PRK07590 283 WNR--RQSTKF----NGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA-GFEVYGGVNAPYIWVKTPDG 355 (409)
T ss_pred HHH--HHhhcc----cCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCcceEEEEECCCC
Confidence 000 000000 001122455544434 24566777888888899999999987 7776655556788888764
Q ss_pred CCHHHHHHHHHh-CCceecc---CCC--CCeEEEEecCCCHHHHHHHHHHHHHH
Q 009181 451 VDIFEVNDIMSS-KGWHLNP---LQR--PNSIHICVTLQHVAVVDVFLRDLRES 498 (541)
Q Consensus 451 ~~~~~l~~~l~~-~G~~~~~---~~~--~~~iRi~~~~~~~e~id~~i~~L~~~ 498 (541)
.+..++.+.+.+ .|+.+.. ++. .+++|+|+. .+.+++++.+++|.++
T Consensus 356 ~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 356 MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF-GSRENVLEAMERIKKA 408 (409)
T ss_pred CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc-CCHHHHHHHHHHHHhh
Confidence 366788877764 6875532 222 368999974 3568899999888765
No 235
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=4.5e-18 Score=174.26 Aligned_cols=271 Identities=20% Similarity=0.216 Sum_probs=188.8
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++++++.+|.++++ + ++|+|+++++.+++.++ +| ++|+++.+.|+.+..+++..|++++.++
T Consensus 59 ~lr~~ia~~~~~~~~~----I--~~t~G~~~~l~~~~~~~-------~g---d~V~v~~P~y~~~~~~~~~~g~~~~~v~ 122 (337)
T PRK03967 59 PLREAIAEFYGLDAEN----I--AVGNGSDELISYLVKLF-------EG---KHIVITPPTFGMYSFYAKLNGIPVIDVP 122 (337)
T ss_pred HHHHHHHHHhCcCcce----E--EEcCCHHHHHHHHHHHh-------CC---CeEEEeCCChHHHHHHHHHcCCeEEEee
Confidence 3555777788887765 6 89999999998766543 34 8999999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCC
Q 009181 255 VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSV 334 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~ 334 (541)
+++++.+|++++++++ ++++++++++|+||||.+.+.++|.++++ +++++++|++|+.+.- ... .+..+ ..
T Consensus 123 ~~~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~---~~~---~~~~~-~~ 193 (337)
T PRK03967 123 LKEDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSG---KSL---IGLID-EY 193 (337)
T ss_pred cCCCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcc---cch---HHHHh-hC
Confidence 9888899999999875 56788889999999999999999999995 7999999999976531 000 00011 01
Q ss_pred CCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh-HHHHHHH
Q 009181 335 QGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG-QEGYLEN 412 (541)
Q Consensus 335 ~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg-~~g~~~~ 412 (541)
.. .++..++.|... .+..+|+++. ++++..........|. ....++.++...+. .+.+.+.
T Consensus 194 ~~-vi~l~S~SK~~~l~GlRiG~iv~-~~~~i~~~~~~~~~~~---------------~~~~~q~~~~~~l~~~~~~~~~ 256 (337)
T PRK03967 194 PN-LILLRTFSKAFGLAGIRAGYAIA-NEEIIDALYRIKPPFS---------------LNILTMKIVRLALDHYDLIEER 256 (337)
T ss_pred CC-EEEEecchHhhcchhhhheeeec-CHHHHHHHHhhcCCCC---------------CCHHHHHHHHHHHhCHHHHHHH
Confidence 12 456678899943 4556898776 4444332221111110 01224444444442 3455666
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccC--CCCCeEEEEecCCCHHHHHH
Q 009181 413 TKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPL--QRPNSIHICVTLQHVAVVDV 490 (541)
Q Consensus 413 ~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~--~~~~~iRi~~~~~~~e~id~ 490 (541)
.+...+.++.+.+.|.+. ..++....+++.. .+.+.|.++|+.+... ..++++|++++. .++.++
T Consensus 257 ~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~~~--~~~~~~ 323 (337)
T PRK03967 257 IDYIIKERERVRRELGEY-----AYPSDANFLLLKL------DAYDYLLENGIVVRKLSGRLEGHIRVTVGK--REENDE 323 (337)
T ss_pred HHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhH------HHHHHHHHCCEEEEeCCCCCCCeEEEecCC--HHHHHH
Confidence 677777778888888764 1244556666554 2678888999766433 234789999883 467788
Q ss_pred HHHHHHHHHH
Q 009181 491 FLRDLRESVE 500 (541)
Q Consensus 491 ~i~~L~~~~~ 500 (541)
+++.|+++.+
T Consensus 324 l~~~l~~~~~ 333 (337)
T PRK03967 324 FIKALKEIKE 333 (337)
T ss_pred HHHHHHHHHH
Confidence 8888877654
No 236
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.83 E-value=2.1e-19 Score=184.08 Aligned_cols=237 Identities=19% Similarity=0.195 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEE
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLW 251 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~ 251 (541)
.-.|.++..++.||++... .+|+|+|.+|..+++++.. +| +.|+++..+|-|+..++.+.|++++
T Consensus 67 ~I~eAe~~aA~~fGAd~t~-------flvnGsT~g~~a~i~a~~~-----~g---d~VLv~RN~HkSv~~alil~ga~Pv 131 (417)
T PF01276_consen 67 IIKEAEELAARAFGADKTF-------FLVNGSTSGNQAMIMALCR-----PG---DKVLVDRNCHKSVYNALILSGAIPV 131 (417)
T ss_dssp HHHHHHHHHHHHHTESEEE-------EESSHHHHHHHHHHHHHTT-----TT---CEEEEETT--HHHHHHHHHHTEEEE
T ss_pred HHHHHHHHHHHhcCCCeEE-------EEecCchHHHHHHHHHhcC-----CC---CEEEEcCCcHHHHHHHHHHcCCeEE
Confidence 3445667999999999764 7899999999999999874 77 9999999999999999999999999
Q ss_pred EeeCCC-----CCccCH-----HHHHHhhccCc-----eEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccch
Q 009181 252 RVPVDK-----EFRADV-----KAIKKYINRNT-----VLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFV 316 (541)
Q Consensus 252 ~v~~~~-----~~~~d~-----~~Le~~i~~~t-----~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~ 316 (541)
+++... -+.+++ +.++++|++++ .+|++++||+ .|.+.|+++|+++|++++++|+||+|+|+..
T Consensus 132 yi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~ 210 (417)
T PF01276_consen 132 YIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHF 210 (417)
T ss_dssp EEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTG
T ss_pred EecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccc
Confidence 998742 124566 99999998653 3599999998 9999999999999999999999999998764
Q ss_pred hhhhhhcCCCCCCCCcCCCCce-------EEEeCCCCCCCCCCCceEEEEeccc-ccccccccccccCCCccCCCcccCC
Q 009181 317 LPFAKKLGYPIPPFDFSVQGVT-------SISVDVHKYGLAPKGTSVVLYRNRE-IRKHQFVAVTEWSGGLYVSPTVAGS 388 (541)
Q Consensus 317 ~~f~~~~g~~~p~~~~~~~gvd-------sis~~~hK~~~~p~g~g~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gs 388 (541)
- |.. .| -.....|+| .++-|+||.+.+...++++.+++.. +....+...- .-....|
T Consensus 211 ~-F~~-----lp-~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l--------~~~~TTS 275 (417)
T PF01276_consen 211 G-FHP-----LP-RSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEAL--------SMHQTTS 275 (417)
T ss_dssp G-CSG-----GG-TTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHH--------HHHS-SS
T ss_pred c-CCC-----Cc-cchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHH--------HHHcCCC
Confidence 3 321 11 122345667 9999999999999999999998875 2221110000 0011224
Q ss_pred CCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh---hcCCCeEEecCC
Q 009181 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGI---KEIPELFIIGRP 439 (541)
Q Consensus 389 r~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L---~~~~~~~v~~~~ 439 (541)
.+..+++++-.+.+.+....-++..++..+.++.+++.| ++++++++++++
T Consensus 276 PSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~ 329 (417)
T PF01276_consen 276 PSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPE 329 (417)
T ss_dssp --HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-S
T ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCcc
Confidence 445567888888877734444677788888888888888 667888887664
No 237
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=2.3e-18 Score=177.84 Aligned_cols=282 Identities=15% Similarity=0.103 Sum_probs=194.9
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHH----
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK---- 241 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~k---- 241 (541)
.|....+|+ .++.+-+.+. + +++++|++|+..++.++.+ +| ++|+++.+.|+++..
T Consensus 63 nPt~~~Le~----~la~le~~~~-------~-v~~sSG~aAi~~~l~all~-----~G---D~Vlv~~~~Y~~~~~l~~~ 122 (395)
T PRK05967 63 TPTTDALCK----AIDALEGSAG-------T-ILVPSGLAAVTVPFLGFLS-----PG---DHALIVDSVYYPTRHFCDT 122 (395)
T ss_pred ChHHHHHHH----HHHHHhCCCC-------E-EEECcHHHHHHHHHHHhcC-----CC---CEEEEccCCcHHHHHHHHH
Confidence 355445554 7777766442 1 6777789999999988753 77 999999999998764
Q ss_pred HHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 242 a~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
.++.+|+++..++.+ +.++++++++++|++|++++|+||++.+.|+++|+++|+++|++++||++|+.++.
T Consensus 123 ~l~~~Gi~v~~vd~~-----~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~---- 193 (395)
T PRK05967 123 MLKRLGVEVEYYDPE-----IGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLY---- 193 (395)
T ss_pred HHHhcCeEEEEeCCC-----CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCcee----
Confidence 457789999998654 45889999999999999999999999999999999999999999999999875432
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHH
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~ 399 (541)
++....|+|++..+..||..|..+ .|+ +..+++........... .|.-.. ...+|.
T Consensus 194 --------~~pl~~GaDivv~S~tKy~~Gh~d~~~G~-v~~~~~~~~~l~~~~~~-----------~G~~~~--p~da~l 251 (395)
T PRK05967 194 --------FRPLDFGVDISIHAATKYPSGHSDILLGT-VSANEKCWPQLLEAHGT-----------LGLCAG--PDDTYQ 251 (395)
T ss_pred --------cChhHcCCCEEEEecccccCCCCCeeEEE-EEcCHHHHHHHHHHHHH-----------cCCCCC--HHHHHH
Confidence 334557999999999999433222 464 44444322111101110 111111 236676
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEE-ecCC----------------CeeEEEEecCCC---C---HHHH
Q 009181 400 ALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFI-IGRP----------------DMTIVAFGSDVV---D---IFEV 456 (541)
Q Consensus 400 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v-~~~~----------------~~~~v~f~~~~~---~---~~~l 456 (541)
.+ .|.+.+.-+.++..+++..+++.|++.|.++- ..|. .+++++|..++. + ..++
T Consensus 252 ~~--rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f 329 (395)
T PRK05967 252 IL--RGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAF 329 (395)
T ss_pred HH--cCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHH
Confidence 65 57778888999999999999999999888743 3221 147899998632 2 2333
Q ss_pred HHHHHh--CCcee---------cc--------CCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 457 NDIMSS--KGWHL---------NP--------LQR-PNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 457 ~~~l~~--~G~~~---------~~--------~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
.+.|.- .+..+ .. .+. ++.+|+|++. |+.|.++++|+++++.+.
T Consensus 330 ~~~l~l~~~~~slG~~~sLi~~~~~~~~~~~~~~~~~~liRlSvGl---Ed~~dLi~Dl~~Al~~~~ 393 (395)
T PRK05967 330 LDALEIFGLGYSWGGYESLALHVKLGDRTVAKAPYAGPVIRLQIGL---EDVPDLKADLERGFAAAS 393 (395)
T ss_pred HHhCCcceEccCCCCcceeeeeCCCChhHhhhccCCCCeEEEEecc---CCHHHHHHHHHHHHHhhh
Confidence 333321 11000 00 011 2579999997 678888899998887543
No 238
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.83 E-value=3.6e-18 Score=174.41 Aligned_cols=271 Identities=11% Similarity=0.063 Sum_probs=187.0
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++.+|.+ + + ++|+|+++++.+++.+ .+| ++|+++.++|+.+...++.+|++++.||
T Consensus 53 ~Lr~~ia~~~~~~--~----I--~it~Gs~~al~~~~~~-------~~g---d~v~v~~P~y~~~~~~~~~~g~~~~~v~ 114 (330)
T PRK05664 53 GLEAAARAYYGAP--Q----L--LPVAGSQAAIQALPRL-------RAP---GRVGVLSPCYAEHAHAWRRAGHQVRELD 114 (330)
T ss_pred HHHHHHHHHhCCC--C----E--EECcCHHHHHHHHHHc-------cCC---CEEEEcCCChHHHHHHHHHcCCeEEEec
Confidence 5667888888753 3 6 8999999999887532 256 8999999999999999999999999998
Q ss_pred CCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 255 VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 255 ~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
++ +++++++ ++.++++++||||||.+.+ +++|+++|+++++++++|++|..+.- . .++..++
T Consensus 115 ~~--------~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~-~-----~s~~~~~ 179 (330)
T PRK05664 115 EA--------EVEAALD-SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTP-Q-----HSLAACA 179 (330)
T ss_pred hh--------hHhhhhc-CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCC-c-----ccccccc
Confidence 64 3555553 6778899999999999987 55667777899999999999965431 0 0011111
Q ss_pred cCCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhH-HHH
Q 009181 332 FSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ-EGY 409 (541)
Q Consensus 332 ~~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~-~g~ 409 (541)
...-.++..++.|... ++..+|+++.. +++..........|.. + ..+++++...+.. ...
T Consensus 180 --~~~~vi~~~SfSK~~gl~GlRiG~~v~~-~~l~~~~~~~~~~~~~----------~-----~~~~~~~~~~L~~~~~~ 241 (330)
T PRK05664 180 --HRPGLIVLRSFGKFFGLAGARLGFVLAE-PALLRALAELLGPWTV----------S-----GPTRWLAQAALADTPWQ 241 (330)
T ss_pred --cCCCEEEEeeccccccCCCcceEEEEeC-HHHHHHHHHhcCCCCC----------C-----HHHHHHHHHHHhChHHH
Confidence 1111356778889953 56669987764 4443322211112211 1 1233444444432 335
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHH
Q 009181 410 LENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVD 489 (541)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id 489 (541)
++..+...+.++++.+.|++. +++.. .....+++++.+ +..++.+.|.++|+.+..++.++++|++++. +.++.+
T Consensus 242 ~~~~~~~~~~r~~l~~~L~~~-~~~~~-~~~~~f~~~~~~--~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~-~~~~~~ 316 (330)
T PRK05664 242 RRQRERLLAASQRLAALLRRH-GLTPA-GGCALFQWVRTE--DAAALHEFLARRGILTRLFEQPASLRFGLPA-DEADWA 316 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCccc-CCcceEEEEecC--CHHHHHHHHHHCCeEEEECCCCCeEEEECCC-CHHHHH
Confidence 566777778899999999987 55422 122345566543 6788999999999988766667899999985 447888
Q ss_pred HHHHHHHHHHHH
Q 009181 490 VFLRDLRESVET 501 (541)
Q Consensus 490 ~~i~~L~~~~~~ 501 (541)
++++.|+++.++
T Consensus 317 ~l~~al~~~~~~ 328 (330)
T PRK05664 317 RLDQALLAYRKE 328 (330)
T ss_pred HHHHHHHHHHhh
Confidence 888888877654
No 239
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=5.5e-18 Score=177.85 Aligned_cols=292 Identities=17% Similarity=0.176 Sum_probs=194.1
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHH--
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA-- 243 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~-- 243 (541)
.|....+| +.++++.|.+. . +++++|++|+..++.++.. +| ++|+++...|......+
T Consensus 57 ~pt~~~Le----~~lA~l~g~~~------~--l~~ssG~~Ai~~al~al~~-----~G---d~Vl~~~~~Y~~t~~~~~~ 116 (425)
T PRK06084 57 NPTNDVLE----QRVAALEGGVG------A--LAVASGMAAITYAIQTIAE-----AG---DNIVSVAKLYGGTYNLLAH 116 (425)
T ss_pred CchHHHHH----HHHHHHhCCCc------e--eEehhHHHHHHHHHHHHhC-----CC---CEEEEeCCCcchHHHHHHH
Confidence 34445444 48888888542 2 7888999999999998753 66 89999998887544433
Q ss_pred --hhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhh
Q 009181 244 --QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 244 --~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~ 321 (541)
...|+++..++.+ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++++.+..
T Consensus 117 ~l~~~gi~v~~~d~~-----d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~---- 187 (425)
T PRK06084 117 TLPRIGIETRFAAHD-----DIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVL---- 187 (425)
T ss_pred hcccceeEEEEECCC-----CHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc----
Confidence 2357777777643 89999999999999999999999999999999999999999999999999974432
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC-ceEEEEeccccc-----ccc--ccc-ccccCCCccCCC---------
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG-TSVVLYRNREIR-----KHQ--FVA-VTEWSGGLYVSP--------- 383 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g-~g~ll~~~~~~~-----~~~--~~~-~~~~~~~~~~~~--------- 383 (541)
.+....|+|++..++|||+.++.. .|.+++.+.... ... +.. .+.|.+ .....
T Consensus 188 --------~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 258 (425)
T PRK06084 188 --------CRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHG-VTYTEAFGPAAFIG 258 (425)
T ss_pred --------CChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCccccc-chhhhhcchHHHHH
Confidence 111245799999999999654432 344455432211 000 000 111111 00000
Q ss_pred -------cccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------
Q 009181 384 -------TVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP----------------- 439 (541)
Q Consensus 384 -------~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~----------------- 439 (541)
...|.+... ..+|..+ -|.+.+..+.++..+++..+++.|++.|+++-+.-|
T Consensus 259 ~~~~~~~~~~g~~l~~--~~a~l~l--rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g 334 (425)
T PRK06084 259 RCRVVPLRNMGAALSP--FNAFLIL--QGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGG 334 (425)
T ss_pred HHHHHHHHhcCCCCCH--HHHHHHH--cCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCC
Confidence 001222222 2555554 466788999999999999999999999887643221
Q ss_pred -CeeEEEEecCCC--CHHHHHHHHHh--CCce--------e----------c-----cCCC-CCeEEEEecCCCHHHHHH
Q 009181 440 -DMTIVAFGSDVV--DIFEVNDIMSS--KGWH--------L----------N-----PLQR-PNSIHICVTLQHVAVVDV 490 (541)
Q Consensus 440 -~~~~v~f~~~~~--~~~~l~~~l~~--~G~~--------~----------~-----~~~~-~~~iRi~~~~~~~e~id~ 490 (541)
..++++|.+++. ...++.+.|.- .+.. . + ..+. ++.+|+|++. ||.|.
T Consensus 335 ~~gg~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl---Ed~~d 411 (425)
T PRK06084 335 KPASILSFGIKGGQAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI---EHIDD 411 (425)
T ss_pred CcceEEEEEecCCHHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHH
Confidence 246899998642 13344444331 1110 0 0 0111 2689999998 78899
Q ss_pred HHHHHHHHHHHH
Q 009181 491 FLRDLRESVETV 502 (541)
Q Consensus 491 ~i~~L~~~~~~l 502 (541)
++++|+++++..
T Consensus 412 Li~dl~~Al~~~ 423 (425)
T PRK06084 412 IIADLAQALDAS 423 (425)
T ss_pred HHHHHHHHHHhh
Confidence 999999998754
No 240
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.83 E-value=3.1e-18 Score=177.44 Aligned_cols=288 Identities=13% Similarity=0.101 Sum_probs=194.3
Q ss_pred CcccchHHHHHHHHHHHHHHHHhCCC---CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 162 HLDIFQSVARFEAEVIAMTAALLGNK---EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 162 ~~~~~~~~~~~e~ev~~~la~l~g~~---~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
.|....+..++.+.+.+++.+.+|.+ +++ + ++|+|+++++..++.++.- ++| ++|+++++.|+.
T Consensus 57 ~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~----I--~it~G~~~~i~~~~~~l~~----~~g---d~Vl~~~p~y~~ 123 (364)
T PRK07865 57 GYPTTAGTPELREAIVGWLARRRGVTGLDPAA----V--LPVIGSKELVAWLPTLLGL----GPG---DVVVIPELAYPT 123 (364)
T ss_pred CCCCccCCHHHHHHHHHHHHHHcCCCCCCccc----E--EEccChHHHHHHHHHHHcC----CCC---CEEEECCCCccc
Confidence 45445677788888888888877754 444 6 8999999999887766520 266 899999999999
Q ss_pred HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccc
Q 009181 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~ 315 (541)
+..+++.+|+++..++ +.++++ .+++++|++++|+||||.+.+ +++|.++|+++|+++++|++|+.+
T Consensus 124 ~~~~~~~~g~~~~~~~-------~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 193 (364)
T PRK07865 124 YEVGARLAGATVVRAD-------SLTELG---PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLEL 193 (364)
T ss_pred HHHHHHhcCCEEEecC-------ChhhCC---cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhh
Confidence 9999999999988875 223332 257899999999999998866 678899999999999999999865
Q ss_pred hhhhhhhcCCCCCCCCcC----CCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccc--cccCCCccCCCcccCC
Q 009181 316 VLPFAKKLGYPIPPFDFS----VQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAV--TEWSGGLYVSPTVAGS 388 (541)
Q Consensus 316 ~~~f~~~~g~~~p~~~~~----~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~~gs 388 (541)
... . ...+.+... ...-.+++.++.|.. ..+..+|+++. ++++........ ..|.. +
T Consensus 194 ~~~---~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~-~~~~~~~~~~~~~~~~~~~----------~ 257 (364)
T PRK07865 194 GWD---A--EPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG-DPALVAELLEVRKHAGMMV----------P 257 (364)
T ss_pred ccC---C--CCCccccccccCCccceEEEEeechhccCCCceeeEEEec-CHHHHHHHHHHHHhcCCCc----------C
Confidence 431 0 001111111 112357778899984 34555897654 454443221111 11100 0
Q ss_pred CCCchHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCcee
Q 009181 389 RPGGLIAGAWAALMSLG-QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHL 467 (541)
Q Consensus 389 r~~~~~a~~~~al~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~ 467 (541)
...+.++...+. .+..++..+...++++.+.+.|++. ++.+..++...++++.. +.+..++.+.|.++|+.+
T Consensus 258 -----~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gv~v 330 (364)
T PRK07865 258 -----APVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFRVDHSEAGLYLWATR-GEDCWDTVAWLAERGILV 330 (364)
T ss_pred -----HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCccEEEEEeC-CCCHHHHHHHHHHCCEEE
Confidence 113333334443 3446677777788889999999886 77765444444455554 345678888999999866
Q ss_pred cc---CC--CCCeEEEEecCCCHHHHHHHHHHHH
Q 009181 468 NP---LQ--RPNSIHICVTLQHVAVVDVFLRDLR 496 (541)
Q Consensus 468 ~~---~~--~~~~iRi~~~~~~~e~id~~i~~L~ 496 (541)
.. ++ .++++|++++. +.+++++++++|+
T Consensus 331 ~pg~~f~~~~~~~iRi~~~~-~~~~~~~~~~~l~ 363 (364)
T PRK07865 331 APGDFYGPAGAQHVRVALTA-TDERIAAAVERLA 363 (364)
T ss_pred eCccccCcCCCCEEEEEecC-CHHHHHHHHHHhh
Confidence 43 12 35799999985 4688999888875
No 241
>PRK10534 L-threonine aldolase; Provisional
Probab=99.83 E-value=1.2e-18 Score=178.42 Aligned_cols=289 Identities=18% Similarity=0.151 Sum_probs=187.1
Q ss_pred cccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH
Q 009181 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka 242 (541)
|...+...++++ .+++++|.++. ++++||++++..++.+... +| ++|+++.+.|.....+
T Consensus 30 Y~~~~~~~~L~~----~la~~~g~~~~--------~v~~~g~~a~~~~l~~~~~-----~g---d~vi~~~~~~~~~~~~ 89 (333)
T PRK10534 30 YGDDPTVNALQD----YAAELSGKEAA--------LFLPTGTQANLVALLSHCE-----RG---EEYIVGQAAHNYLYEA 89 (333)
T ss_pred cCCCHHHHHHHH----HHHHHhCCCeE--------EEeCchHHHHHHHHHHhcC-----CC---CeeEEechhhhhHhcC
Confidence 333455555555 77888888652 6888999999988887642 66 8899888888643321
Q ss_pred --HhhcC-CeEEEeeCCCCCccCHHHHHHhhcc------CceEEEeecCCCCCccccCHH---HHHHHHHHcCCEEEEeC
Q 009181 243 --AQYFN-IKLWRVPVDKEFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDPIQ---ELGELALSHGTCLHVDL 310 (541)
Q Consensus 243 --~~~~G-~~v~~v~~~~~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~i~---~I~~la~~~~i~lhvD~ 310 (541)
+...| ++++.+++++++.+|+++|++++++ ++++|++++|+ +|++.|.+ +|.++|++|++++++|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDE 167 (333)
T PRK10534 90 GGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDG 167 (333)
T ss_pred CchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeH
Confidence 34444 7888888888899999999999976 58888988765 59997755 55678999999999999
Q ss_pred CcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCC
Q 009181 311 CLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 311 a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~ 390 (541)
||..+.. ...+. .........|.+..+++|. ++.. .|+.++.++++..........|.++. ..
T Consensus 168 A~~~~~~---~~~~~---~~~~~~~~~~~~~~s~SK~-~~~~-~G~~~~~~~~~i~~~~~~~~~~~~~~---------~~ 230 (333)
T PRK10534 168 ARIFNAV---VAYGC---ELKEITQYCDSFTICLSKG-LGTP-VGSLLVGNRDYIKRARRWRKMTGGGM---------RQ 230 (333)
T ss_pred HHHHHHH---HHcCC---CHHHHHhcCCEEEEEeEcC-CCCc-ccceEEcCHHHHHHHHHHHHHhCCch---------hh
Confidence 9752111 00111 0100011234455678997 4433 56445556665543322222121110 00
Q ss_pred CchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccC
Q 009181 391 GGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPL 470 (541)
Q Consensus 391 ~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~ 470 (541)
. ...+.+++..+. ...+..++..+.++++.+.|+++ |+++. ++..+++.++.++.+..++.+.|.++|+.+...
T Consensus 231 ~--~~~~a~~~~~l~--~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~nfv~~~~~~~~~~~~~~~l~~~gi~v~~~ 304 (333)
T PRK10534 231 A--GILAAAGLYALK--HNVARLQEDHDNAAWLAEQLREA-GADVM-RQDTNMLFVRVGEEQAAALGEYMRERNVLINAS 304 (333)
T ss_pred H--HHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHhC-CCccC-CCCceEEEEECCchhHHHHHHHHHHcCeeecCC
Confidence 0 112333333332 12344555666788999999997 88766 457888888876445678889999999887543
Q ss_pred CCCCeEEEEecC-CCHHHHHHHHHHHHHHH
Q 009181 471 QRPNSIHICVTL-QHVAVVDVFLRDLRESV 499 (541)
Q Consensus 471 ~~~~~iRi~~~~-~~~e~id~~i~~L~~~~ 499 (541)
..+|++.+. .+.+++++++++|++.+
T Consensus 305 ---~~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 305 ---PIVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred ---ceEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 257887653 24499999999998664
No 242
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=3.6e-18 Score=176.46 Aligned_cols=279 Identities=16% Similarity=0.171 Sum_probs=195.7
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++.++.++++ + ++|+|+++++.++++++.+ +| ++|++++++|+.+...++..|++++.+|
T Consensus 69 ~lr~~ia~~~~~~~~~----I--~it~G~~~al~~~~~~~~~-----~g---d~V~v~~P~y~~~~~~~~~~g~~~~~~~ 134 (357)
T PRK14809 69 DLTAALADRWDVSPEQ----V--WLANGGDGALDYLARAMLD-----PG---DTVLVPDPGFAYYGMSARYHHGEVREYP 134 (357)
T ss_pred HHHHHHHHHhCCCcce----E--EECCCHHHHHHHHHHHhcC-----CC---CEEEEeCCChHHHHHHHHHcCCeEEEEe
Confidence 4666777788888776 6 8999999999999888753 67 8999999999999889999999999999
Q ss_pred CCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHc--CCEEEEeCCcccchhhhhhhcCCCCCCC
Q 009181 255 VDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH--GTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (541)
Q Consensus 255 ~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~--~i~lhvD~a~gg~~~~f~~~~g~~~p~~ 330 (541)
++. ++.+|.+++++++ ++++++++++|+||||.+.+.+++.++++.. ++++++|++|+.+... +...+.+
T Consensus 135 l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~-----~~~~~~~ 208 (357)
T PRK14809 135 VSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAER-----PSAVALV 208 (357)
T ss_pred cccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCC-----chhHHHH
Confidence 853 5778888888776 4688999999999999999988777777654 7899999999876431 0000001
Q ss_pred CcCCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHh-HHH
Q 009181 331 DFSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG-QEG 408 (541)
Q Consensus 331 ~~~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg-~~g 408 (541)
+ ...-..+..++.|... .+..+|+++..+ +++.........|. ....++++++..+. .+.
T Consensus 209 ~--~~~~vi~~~SfSK~~~~~GlRiG~~~~~~-~~~~~~~~~~~~~~---------------~~~~~~~~a~~~l~~~~~ 270 (357)
T PRK14809 209 E--ERDDVAVLRTFSKAYGLAGLRLGYAVVPE-EWADAYARVNTPFA---------------ASELACRAGLAALDDDEH 270 (357)
T ss_pred h--hCCCEEEEecchhHhcCcchhheeeecCH-HHHHHHHHhCCCCC---------------CCHHHHHHHHHHhCCHHH
Confidence 1 1112355668889942 455689877643 33332211111111 11235566655553 344
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceecc---CCCCCeEEEEecCCCH
Q 009181 409 YLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP---LQRPNSIHICVTLQHV 485 (541)
Q Consensus 409 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~---~~~~~~iRi~~~~~~~ 485 (541)
+++..+...+..+++.+.|... . . ++...+++++.. +..++.+.|.++|+.+.. ++.++++|+++. +.
T Consensus 271 ~~~~~~~~~~~r~~l~~~L~~~-~---~-~~~g~f~~~~~~--~~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~--~~ 341 (357)
T PRK14809 271 VERTVETARWAREYIREELDAP-T---W-ESAGNFVLAEVG--DASAVAEAAQERGVIVRDCTSFGLPECIRITCG--TR 341 (357)
T ss_pred HHHHHHHHHHHHHHHHHHhcCc-c---C-CCCCCEEEEECC--CHHHHHHHHHHCCEEEEECccCCCCCeEEEecC--CH
Confidence 6666777777777788887642 1 2 456677777764 567888999999976543 344679999986 36
Q ss_pred HHHHHHHHHHHHHHH
Q 009181 486 AVVDVFLRDLRESVE 500 (541)
Q Consensus 486 e~id~~i~~L~~~~~ 500 (541)
+++++++++|+++++
T Consensus 342 ~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 342 EETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHHHHHHHHHhc
Confidence 899999999988764
No 243
>PLN02368 alanine transaminase
Probab=99.83 E-value=2.8e-18 Score=179.16 Aligned_cols=256 Identities=11% Similarity=0.088 Sum_probs=181.4
Q ss_pred CCCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc
Q 009181 160 PLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (541)
Q Consensus 160 ~~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~ 237 (541)
..+|....|..++.+.+.+++.+..|.+ +++ | ++|+|+++++..++.++.. .+| ++|+++++.|+
T Consensus 100 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~----I--~it~Ga~~al~~~~~~l~~----~pG---d~Vli~~P~Y~ 166 (407)
T PLN02368 100 LGAYSDSRGLPGVRKEVAEFIERRDGYPSDPEL----I--FLTDGASKGVMQILNAVIR----GEK---DGVLVPVPQYP 166 (407)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhh----E--EEcccHHHHHHHHHHHHcC----CCC---CEEEEeCCCCc
Confidence 3456656677788888888888877754 444 7 8999999999999988751 156 89999999999
Q ss_pred hHHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhcc------CceEEEeecCCCCCccccC---HHHHHHHHHHcCCEE
Q 009181 238 AYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCL 306 (541)
Q Consensus 238 s~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~l 306 (541)
.+...++..|++++.+|+++ ++.+|+++|++++++ +|+++++++|+||||.+.+ +++|+++|++||+++
T Consensus 167 ~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~I 246 (407)
T PLN02368 167 LYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVL 246 (407)
T ss_pred cHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 99999999999999999975 588999999999974 6899999999999999977 668888999999999
Q ss_pred EEeCCcccchhhhhhhcCCCCC------CCCc--CCCCceEEEeCCCCCCC--CCCCceEEEE--ecccccccccccc-c
Q 009181 307 HVDLCLGGFVLPFAKKLGYPIP------PFDF--SVQGVTSISVDVHKYGL--APKGTSVVLY--RNREIRKHQFVAV-T 373 (541)
Q Consensus 307 hvD~a~gg~~~~f~~~~g~~~p------~~~~--~~~gvdsis~~~hK~~~--~p~g~g~ll~--~~~~~~~~~~~~~-~ 373 (541)
++|++|+.+... ....+ .+ .++. ...+-.++..++.|..+ .+..+|+++. .++++........ .
T Consensus 247 I~DE~Y~~l~y~--~~~~~-~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~ 323 (407)
T PLN02368 247 LGDEVYQQNIYQ--DERPF-ISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASI 323 (407)
T ss_pred EEEccccccccC--CCCCc-ccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcc
Confidence 999999876541 00000 00 0000 00113455668899843 5666998775 3444443322111 1
Q ss_pred ccCCCccCCCcccCCCCCchHHHHHHHHHHHhH------------HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCe
Q 009181 374 EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ------------EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDM 441 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~------------~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~ 441 (541)
.|. ....+++++...+.. +..+++.+...++++++.+.|+++||+.+. .|++
T Consensus 324 ~~~---------------~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~-~P~G 387 (407)
T PLN02368 324 ALS---------------PNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCN-FTEG 387 (407)
T ss_pred cCC---------------CCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeC-CCCe
Confidence 111 112356666655531 112345778888999999999999998865 5666
Q ss_pred eEEEEe
Q 009181 442 TIVAFG 447 (541)
Q Consensus 442 ~~v~f~ 447 (541)
+++.|.
T Consensus 388 afy~~~ 393 (407)
T PLN02368 388 AMYSFP 393 (407)
T ss_pred eeEecc
Confidence 666654
No 244
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.82 E-value=5.8e-18 Score=177.93 Aligned_cols=284 Identities=18% Similarity=0.206 Sum_probs=189.6
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HHHHHhhcCCeE
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDKAAQYFNIKL 250 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~ka~~~~G~~v 250 (541)
++++.+++++|.+. . +++++|++|+..++.++.. +| ++|+++.+.|.+ +...++.+|+++
T Consensus 61 ~le~~lA~l~g~~~------~--v~~~sG~~Ai~~al~~l~~-----~G---d~Vl~~~~~y~~t~~~~~~~~~~~G~~v 124 (418)
T TIGR01326 61 VLEQRIAALEGGVA------A--LAVASGQAAITYAILNLAQ-----AG---DNIVSSSYLYGGTYNLFKHTLKRLGIEV 124 (418)
T ss_pred HHHHHHHHHhCCCe------E--EEEccHHHHHHHHHHHHhC-----CC---CEEEEECCCcHHHHHHHHHHHHHcCcEE
Confidence 45558999998742 2 8999999999999988753 66 899999988755 345567789999
Q ss_pred EEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCC
Q 009181 251 WRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (541)
Q Consensus 251 ~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~ 330 (541)
+.++.+ |++++++++++++++|++++|+||+|.+.|+++|+++|+++|+++++|++++.+.. .
T Consensus 125 ~~v~~~-----d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~------------~ 187 (418)
T TIGR01326 125 RFVDPD-----DPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL------------C 187 (418)
T ss_pred EEECCC-----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc------------C
Confidence 999864 89999999999999999999999999999999999999999999999999974422 1
Q ss_pred CcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccc--ccccc----ccCCCccCC---------------CcccC
Q 009181 331 DFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQ--FVAVT----EWSGGLYVS---------------PTVAG 387 (541)
Q Consensus 331 ~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~--~~~~~----~~~~~~~~~---------------~~~~g 387 (541)
+....|+|++..+++|++ ++.| .|+++.+.+...... +.... .+....... ....|
T Consensus 188 ~~l~~g~Divv~S~sK~l-~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~G 266 (418)
T TIGR01326 188 RPIDHGADIVVHSATKYI-GGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLRDLG 266 (418)
T ss_pred CchhcCCeEEEECccccc-cCCccceEEEEEecccccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHHHhcC
Confidence 112357899999999995 5544 677777554322110 00000 000000000 00011
Q ss_pred CCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC------------------CeeEEEEecC
Q 009181 388 SRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP------------------DMTIVAFGSD 449 (541)
Q Consensus 388 sr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~------------------~~~~v~f~~~ 449 (541)
.... ...+|..+ .|...+..+.++...++..+.+.|.+.|++..+.-| ..++++|.++
T Consensus 267 ~~~~--p~~a~~~~--~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~~~~~~~~~~~~~~g~g~~~s~~l~ 342 (418)
T TIGR01326 267 AALS--PFNAFLLL--QGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLASHPHHALAKKYLPKGFGAVLSFEIK 342 (418)
T ss_pred CCCC--HHHHHHHH--CCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhccCCCcceEEEEec
Confidence 1111 22555554 355566667777778889999999988887644321 1458899886
Q ss_pred CC--CHHHHHHHHHh--C----C----cee----------c-----cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHH
Q 009181 450 VV--DIFEVNDIMSS--K----G----WHL----------N-----PLQR-PNSIHICVTLQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 450 ~~--~~~~l~~~l~~--~----G----~~~----------~-----~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~ 499 (541)
+. ...++.+.|.- . | ... . ..+. ++.+|+|++. ||++.++++|++++
T Consensus 343 ~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~Al 417 (418)
T TIGR01326 343 GGREAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIRLSVGI---ENIDDIIADLEQAL 417 (418)
T ss_pred CCHHHHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHhh
Confidence 42 12334443321 1 1 000 0 0111 2579999998 67888888888875
No 245
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.82 E-value=5.4e-18 Score=175.37 Aligned_cols=283 Identities=12% Similarity=0.093 Sum_probs=193.9
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEee
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~ 254 (541)
++++.+++.+++++++ + ++|+|+++++.+++.++. +| +.|+++++.|+.+...++.+|++++.+|
T Consensus 61 ~Lr~aia~~~~v~~~~----I--~it~G~~~~i~~~~~~l~------~g---~~vlv~~P~y~~~~~~~~~~g~~~~~v~ 125 (360)
T PRK07392 61 ELRLALAQHHQLPPEW----I--LPGNGAAELLTWAGRELA------QL---RAVYLITPAFGDYRRALRAFGATVKELP 125 (360)
T ss_pred HHHHHHHHHhCcChhh----E--EECCCHHHHHHHHHHHhC------CC---CeEEEECCCcHHHHHHHHHcCCeEEEEe
Confidence 4666777777888776 6 899999999998888753 44 6899999999999999999999999999
Q ss_pred CCCCC-----ccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCC
Q 009181 255 VDKEF-----RADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP 329 (541)
Q Consensus 255 ~~~~~-----~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~ 329 (541)
.++++ ..+++++++.. ++++++++++|+||||.+.+.++|.++++++++ +++|++|+.|... . .. .+.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~--~-~~--~s~ 198 (360)
T PRK07392 126 LPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPP--D-AE--QSL 198 (360)
T ss_pred cccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccC--c-cc--cch
Confidence 97533 25677776654 468899999999999999999999999999985 7779999877531 0 00 000
Q ss_pred CCc-CCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHH
Q 009181 330 FDF-SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQE 407 (541)
Q Consensus 330 ~~~-~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~ 407 (541)
... ....-.++..++.|... ++..+|+++..+ ++.+........|. ....+++++...+...
T Consensus 199 ~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~-~~~~~~~~~~~~~~---------------~s~~~q~~~~~~l~~~ 262 (360)
T PRK07392 199 IPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP-DRLQRWQQWRDPWP---------------VNGLAAAAAIAALADR 262 (360)
T ss_pred HHHhhcCCCEEEEEechhhhcCCchheeeeeCCH-HHHHHHHhhCCCCC---------------CCHHHHHHHHHHhccH
Confidence 110 11112356668889854 666799877643 33322111111111 1133566655555443
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHH-HhCCceecc---CC--CCCeEEEEe
Q 009181 408 GYL-ENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIM-SSKGWHLNP---LQ--RPNSIHICV 480 (541)
Q Consensus 408 g~~-~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l-~~~G~~~~~---~~--~~~~iRi~~ 480 (541)
.+. ...+...+.++++.+.|++++++.+. ++..++++++... +..++.+.+ .+.|+.+.. ++ .++++|+++
T Consensus 263 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~-~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~ 340 (360)
T PRK07392 263 DFQQQTWAWLPPAREALFQGLASLPGLTPL-PSAANFLLVQSQG-SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAV 340 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCCEEEEEcCC-CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEe
Confidence 333 34556777888999999988888865 3556677766643 667888775 567876543 22 247999999
Q ss_pred cCCCHHHHHHHHHHHHHHH
Q 009181 481 TLQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 481 ~~~~~e~id~~i~~L~~~~ 499 (541)
+. .++.+++.+.|++++
T Consensus 341 ~~--~~~~~~l~~al~~~~ 357 (360)
T PRK07392 341 RT--EAENQRLLEALAAIL 357 (360)
T ss_pred CC--HHHHHHHHHHHHHHh
Confidence 85 345567767766654
No 246
>PRK15029 arginine decarboxylase; Provisional
Probab=99.82 E-value=4.3e-18 Score=186.40 Aligned_cols=301 Identities=13% Similarity=0.081 Sum_probs=209.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEE
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLW 251 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~ 251 (541)
.-.+.++..+++||++... .+|+|+|.+|..++.++.. +| +.|+++..+|-|+..++.+.|++++
T Consensus 206 ~I~eAq~~aA~~fgA~~t~-------FlvNGST~gn~a~i~a~~~-----~g---d~Vlv~RN~HKSv~~al~L~ga~Pv 270 (755)
T PRK15029 206 AFGESEKYAARVFGADRSW-------SVVVGTSGSNRTIMQACMT-----DN---DVVVVDRNCHKSIEQGLILTGAKPV 270 (755)
T ss_pred HHHHHHHHHHHHhCCCcEE-------EEeCChhHHHHHHHHHhcC-----CC---CEEEeecccHHHHHHHHHHcCCeEE
Confidence 3445677999999998764 8999999999998888764 77 9999999999999999999999999
Q ss_pred EeeCCC-----CCccC-----HHHHHHhhccC----------ceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCC
Q 009181 252 RVPVDK-----EFRAD-----VKAIKKYINRN----------TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 252 ~v~~~~-----~~~~d-----~~~Le~~i~~~----------t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a 311 (541)
+++..- -+.++ ++.++++|.++ +.++++++||+ .|.+.|+++|+++|++++++|+||+|
T Consensus 271 yl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEA 349 (755)
T PRK15029 271 YMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEA 349 (755)
T ss_pred EecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECc
Confidence 997542 12345 99999999654 23899999988 99999999999999999999999999
Q ss_pred cccchhhhhhhcCCCCCC-CCc-----CCCCce-EEEeCCCCCCCCCCCceEEEEeccc--ccccccccccccCCCccCC
Q 009181 312 LGGFVLPFAKKLGYPIPP-FDF-----SVQGVT-SISVDVHKYGLAPKGTSVVLYRNRE--IRKHQFVAVTEWSGGLYVS 382 (541)
Q Consensus 312 ~gg~~~~f~~~~g~~~p~-~~~-----~~~gvd-sis~~~hK~~~~p~g~g~ll~~~~~--~~~~~~~~~~~~~~~~~~~ 382 (541)
||+... |... .|. ... ...|+| .++-|+||.+.+...++++.+++.. +....+ .. +..
T Consensus 350 hGah~~-F~~~----~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~--~~------~l~ 416 (755)
T PRK15029 350 WYGYAR-FNPI----YADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRF--NQ------AYM 416 (755)
T ss_pred cccccc-cCcc----ccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHH--HH------HHH
Confidence 987653 3221 222 111 126888 8888999999888889988886541 111110 00 001
Q ss_pred CcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCC------------------------------
Q 009181 383 PTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPE------------------------------ 432 (541)
Q Consensus 383 ~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~------------------------------ 432 (541)
-....|.+..+++++-.+-+.+....-++..++..+.+..+++.|.++++
T Consensus 417 ~~qSTSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 496 (755)
T PRK15029 417 MHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFA 496 (755)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCcccccccccccccccc
Confidence 11122444556778888777665433456777788888888888877654
Q ss_pred ------------eEEecC--C--------------CeeEEEEecC--CCCHH---------HHHHHHHhCCceeccCCCC
Q 009181 433 ------------LFIIGR--P--------------DMTIVAFGSD--VVDIF---------EVNDIMSSKGWHLNPLQRP 473 (541)
Q Consensus 433 ------------~~v~~~--~--------------~~~~v~f~~~--~~~~~---------~l~~~l~~~G~~~~~~~~~ 473 (541)
+.++.+ . +..=+.+... +.+.+ .+.+.|.++|+.+.-.+.
T Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~~- 575 (755)
T PRK15029 497 DAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTD- 575 (755)
T ss_pred ccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecCC-
Confidence 333321 0 0111222221 12334 899999888876654333
Q ss_pred CeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 474 NSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 474 ~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
..+-+-++..++ +++++++++|.++-+..
T Consensus 576 ~~vL~l~s~g~t~~~~~~L~~aL~~~~~~~ 605 (755)
T PRK15029 576 FQIMFLFSMGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHHHHhh
Confidence 345555665555 99999999999885543
No 247
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.82 E-value=8.2e-18 Score=172.58 Aligned_cols=374 Identities=17% Similarity=0.215 Sum_probs=259.1
Q ss_pred CCCCCCc-HHHHHHHHHHhCCCCCCC-CC-ceeeeecCCCCcccHHHHHHHHHHhhcccCCCCc-ccchHHHHHHHHHHH
Q 009181 103 LPRAGLG-VGVIEKLKEEKGKDVVWQ-GK-CSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHL-DIFQSVARFEAEVIA 178 (541)
Q Consensus 103 lP~~g~~-~~i~~~l~~~~~~~~~~~-~~-~~g~~y~~~~~~~~~~~~~~~~~~~~~~~n~~~~-~~~~~~~~~e~ev~~ 178 (541)
+=..-.+ .++++.++++.+++.... .. -.|..-+.-+. ..+++-=.+..|.+-.|+.| +..+|..++-.++..
T Consensus 513 VFn~yhSEt~lvRYm~kLenKDlSLvhSMiPLGSCTMKLNs---ttEmmPiTwp~fanIHPF~P~eQaqGY~~lf~~Le~ 589 (1001)
T KOG2040|consen 513 VFNSYHSETELVRYMKKLENKDLSLVHSMIPLGSCTMKLNS---TTEMMPITWPEFANIHPFAPVEQAQGYQQLFTELEK 589 (1001)
T ss_pred hhhhcccHHHHHHHHHHhhccchhhhhhcccccceeeeccc---cceeccccchhhccCCCCCchHHHhhHHHHHHHHHH
Confidence 3344557 899999999988766553 11 12222222222 23333334456666677765 567888999999999
Q ss_pred HHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCC
Q 009181 179 MTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKE 258 (541)
Q Consensus 179 ~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~ 258 (541)
+++++.|.+.-. .--++|.++-...+++.|.+...+..-.+...++|..+|......+.+.|++|+.|.++.+
T Consensus 590 ~Lc~iTG~D~~s-------~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~ 662 (1001)
T KOG2040|consen 590 DLCEITGFDSFS-------LQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDAN 662 (1001)
T ss_pred Hhheeeccccee-------ecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccCC
Confidence 999999998532 3344466666666677776655422122455699999999999999999999999999999
Q ss_pred CccCHHHHHHhhcc---CceEEEeecCCCCCccccC-HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCC
Q 009181 259 FRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP-IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSV 334 (541)
Q Consensus 259 ~~~d~~~Le~~i~~---~t~~vv~~~~~~~~G~id~-i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~ 334 (541)
|.+|..+|++..++ +-.++.++.|++ +|.+++ +.+++++.|+||--+..|+|- .....|. .+...
T Consensus 663 G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGAN------MNAqVGl----c~pGd 731 (1001)
T KOG2040|consen 663 GNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGAN------MNAQVGL----CRPGD 731 (1001)
T ss_pred CCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCC------ccceecc----cCCcc
Confidence 99999999988764 468999999998 899975 999999999999999999994 2344453 23345
Q ss_pred CCceEEEeCCCCCCCCCCC-----ceEEEEeccccccccccccccc-------CCCccCCCcccCCCCC--chHHHHHHH
Q 009181 335 QGVTSISVDVHKYGLAPKG-----TSVVLYRNREIRKHQFVAVTEW-------SGGLYVSPTVAGSRPG--GLIAGAWAA 400 (541)
Q Consensus 335 ~gvdsis~~~hK~~~~p~g-----~g~ll~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~gsr~~--~~~a~~~~a 400 (541)
.|.|..-.+.||.++.|.| .|-+.++... ..+.+.- .++...-.+......| .++.-.|+-
T Consensus 732 ~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HL-----apfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaY 806 (1001)
T KOG2040|consen 732 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-----APFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAY 806 (1001)
T ss_pred ccccceeecccceeeecCCCCCCCCCccchhhhc-----cccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHH
Confidence 6789999999999655554 4444444321 1111111 0110000011111222 234467999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEE----EEecC------CCCHHHHHHHHHhCCceeccC
Q 009181 401 LMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIV----AFGSD------VVDIFEVNDIMSSKGWHLNPL 470 (541)
Q Consensus 401 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v----~f~~~------~~~~~~l~~~l~~~G~~~~~~ 470 (541)
++.+|..|+++..+-.+-+++|+.++|+.. .+++.....+.+ .+... +.+..+++++|.+.|++.+.+
T Consensus 807 ikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTm 884 (1001)
T KOG2040|consen 807 IKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTM 884 (1001)
T ss_pred HHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCcc
Confidence 999999999999999999999999999974 444433222222 22222 236789999999999998877
Q ss_pred CCC--CeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 471 QRP--NSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 471 ~~~--~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
..| +.+-|-.|.... +|+|+|++++-++-+|+.+
T Consensus 885 swPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI~~ 921 (1001)
T KOG2040|consen 885 SWPVAGTLMIEPTESEDKAELDRFCDALISIREEIAQ 921 (1001)
T ss_pred ccccCCceEeccCccccHHHHHHHHHHHHHHHHHHHH
Confidence 655 788888887555 9999999999999887764
No 248
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.82 E-value=8.6e-19 Score=165.32 Aligned_cols=296 Identities=22% Similarity=0.203 Sum_probs=210.9
Q ss_pred cchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHH---
Q 009181 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK--- 241 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~k--- 241 (541)
.-|-+.++|+ .+++++|-+ .|+|+++||++|.+++++..+ ++| .+||+.+.+|.-...
T Consensus 54 eD~tt~rLE~----~vA~l~GKE--------AgLFv~SGTmgNllaIm~Hc~----~rg---~eii~gd~~HI~~~E~gg 114 (384)
T KOG1368|consen 54 EDPTTNRLEQ----RVAELFGKE--------AGLFVPSGTMGNLLAIMVHCH----QRG---SEIIVGDRAHIHRYEQGG 114 (384)
T ss_pred CCccHHHHHH----HHHHHhCcc--------ceeeecccccccHHHHHHHhc----CCC---ceEEeccchheeehhccC
Confidence 3467788888 778888876 348999999999999999875 466 799999999976443
Q ss_pred HHhhcCCeEEEeeCCCCCccCHHHHHHhhcc--------CceEEEeecCCCCCc-cccCHH---HHHHHHHHcCCEEEEe
Q 009181 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINR--------NTVLIVGSAPGFPHG-IIDPIQ---ELGELALSHGTCLHVD 309 (541)
Q Consensus 242 a~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~--------~t~~vv~~~~~~~~G-~id~i~---~I~~la~~~~i~lhvD 309 (541)
.+.+.|+.++.|...+++.||++++|++|.. -|.+|++.+-.+.+| .+.|++ ++.++|+++|+.||.|
T Consensus 115 ~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~D 194 (384)
T KOG1368|consen 115 ISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMD 194 (384)
T ss_pred hhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecc
Confidence 3455688999999888999999999999973 278999999988888 888865 7889999999999999
Q ss_pred CCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCC
Q 009181 310 LCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSR 389 (541)
Q Consensus 310 ~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr 389 (541)
+|-=.-+ +-+.|. | ..--..-.||++.-..|.+.+|-|+ +++.++++......+....-||. +.
T Consensus 195 GARi~NA---avasgV--~-vk~i~~~fDSVsiCLSKglgAPVGS--ViVG~k~FI~kA~~~RKalGGGm--------RQ 258 (384)
T KOG1368|consen 195 GARIFNA---AVASGV--P-VKKICSAFDSVSICLSKGLGAPVGS--VIVGSKDFIDKARHFRKALGGGM--------RQ 258 (384)
T ss_pred hhhhhhH---HHHcCC--C-HHHHHHhhhhhhhhhhccCCCCccc--EEEccHHHHHHHHHHHHHhcCch--------hH
Confidence 9942111 112232 1 1111223499999999998888877 68888876654433333222332 22
Q ss_pred CCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC-CCeeEEEEec--CCCCHHHHHHHHHhCCce
Q 009181 390 PGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR-PDMTIVAFGS--DVVDIFEVNDIMSSKGWH 466 (541)
Q Consensus 390 ~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~f~~--~~~~~~~l~~~l~~~G~~ 466 (541)
.|.+.++...+++ . -....++-++.++.+++.+.+.+++++-.+ .+.+++.+.. ...+..++++.+.+.|+.
T Consensus 259 sGvLaaaaLval~---~--~~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~ 333 (384)
T KOG1368|consen 259 SGVLAAAALVALD---E--NVPLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGIL 333 (384)
T ss_pred HHHHHHHHHHHhh---c--chHHHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHHHHCCeE
Confidence 3444333333332 2 233677778888899999988877887655 5667766554 345899999999999986
Q ss_pred eccCCCCCeEEEEecCCCH-HHHHHHHHHHH-HHHHH
Q 009181 467 LNPLQRPNSIHICVTLQHV-AVVDVFLRDLR-ESVET 501 (541)
Q Consensus 467 ~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~-~~~~~ 501 (541)
+-... ...+|+.+++.-+ ++++.++..++ .++..
T Consensus 334 lm~~~-s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q 369 (384)
T KOG1368|consen 334 LMGGA-SRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQ 369 (384)
T ss_pred Eeecc-ccceEEEEEEecCHHHHHHHHHHHHHHHHhh
Confidence 65322 2358999987655 99999999995 44433
No 249
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.81 E-value=5.4e-18 Score=162.02 Aligned_cols=307 Identities=16% Similarity=0.173 Sum_probs=227.7
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-----HH
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-----YD 240 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-----~~ 240 (541)
.+....+-..+-..++.++|+.+.+ + +++.+.|--+...+.++.. ..+| ..||+++...+. ..
T Consensus 71 ~~~W~~lp~~lgdklApLiGA~~~E----v--vv~dtts~nl~k~L~aalr---~~~~---r~vIv~E~~~fpTdly~a~ 138 (407)
T COG3844 71 KADWFDLPERLGDKLAPLIGARAGE----V--VVTDTTSINLFKVLAAALR---PQEG---RRVIVSEGDNFPTDLYIAE 138 (407)
T ss_pred CCchhhchhHHHHHhhhhhcCCCCc----e--EEeCCcchHHHHHHHHHhc---cCCC---ceEEeecCCCCCcchhhhc
Confidence 3455667777889999999999887 3 5555544444444444431 2234 778888776544 33
Q ss_pred HHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
..+...+.. .+-.+.+.++++++++++++.+|++++.++-||...|+.+|.+++|++|+.+.-|-|+..+++|
T Consensus 139 g~~~~~~~~-----~~~~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp-- 211 (407)
T COG3844 139 GLADLLGIG-----YDLEGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVP-- 211 (407)
T ss_pred chhhhhccc-----ccceeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcc--
Confidence 444555443 2335667889999999999999999999999999999999999999999999999998877664
Q ss_pred hhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCcc-------------CCCcccC
Q 009181 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLY-------------VSPTVAG 387 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~g 387 (541)
.+....|+|+-++.+|||+++++|.=..++-.+..+.........|.|-.. .....+|
T Consensus 212 ---------~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~g 282 (407)
T COG3844 212 ---------VDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCG 282 (407)
T ss_pred ---------eeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeC
Confidence 677889999999999999988887433344444444433334445544210 1112334
Q ss_pred CCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-C--CeEEecCCC----eeEEEEecCCCCHHHHHHHH
Q 009181 388 SRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-P--ELFIIGRPD----MTIVAFGSDVVDIFEVNDIM 460 (541)
Q Consensus 388 sr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~--~~~v~~~~~----~~~v~f~~~~~~~~~l~~~l 460 (541)
+.+-..++++..+|..+..-++.+..++...+++|+.+.++.. + ++++..|.. .+-|++..+ +.+++.+.|
T Consensus 283 t~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--~~~~V~qaL 360 (407)
T COG3844 283 TQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP--HGYQVMQAL 360 (407)
T ss_pred CcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC--cHHHHHHHH
Confidence 4444456788888888888889999999999999999999874 3 688887643 678888876 789999999
Q ss_pred HhCCceeccCCCCCeEEEEecCC-CH-HHHHHHHHHHHHHHHHHH
Q 009181 461 SSKGWHLNPLQRPNSIHICVTLQ-HV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 461 ~~~G~~~~~~~~~~~iRi~~~~~-~~-e~id~~i~~L~~~~~~l~ 503 (541)
.++|+... +..|+.+|+.++.+ ++ +|+-..++.|+++++.+.
T Consensus 361 i~rGVigD-~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 361 IDRGVIGD-FREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred HHcCcccc-ccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 99997544 56688999999754 55 999999999999987654
No 250
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.81 E-value=8.5e-18 Score=173.66 Aligned_cols=289 Identities=14% Similarity=0.125 Sum_probs=190.8
Q ss_pred CcccchHHHHHHHHHHHHHHHHhCCC---CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 162 HLDIFQSVARFEAEVIAMTAALLGNK---EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 162 ~~~~~~~~~~~e~ev~~~la~l~g~~---~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
.|....+..++.+++.+++.+.+|.+ +++ + ++|+|+++++..++.++. .++| ++|++++++|+.
T Consensus 51 ~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~----I--~it~G~~~~i~~~~~~l~----~~~g---d~Vl~~~p~y~~ 117 (357)
T TIGR03539 51 GYPQTWGTPELREAIVDWLERRRGVPGLDPTA----V--LPVIGTKELVAWLPTLLG----LGPG---DTVVIPELAYPT 117 (357)
T ss_pred CCCcccCCHHHHHHHHHHHHHhcCCCCCCcCe----E--EEccChHHHHHHHHHHHc----CCCC---CEEEECCCCcHH
Confidence 34445667788888889998877654 444 6 899999999998777652 1266 899999999999
Q ss_pred HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccc
Q 009181 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~ 315 (541)
+...++.+|++++.++ |++.++ .+++++|++++|+||||.+.+ +++|.++|++||+++++|++|+.+
T Consensus 118 ~~~~~~~~g~~~~~v~-------~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 187 (357)
T TIGR03539 118 YEVGALLAGATPVAAD-------DPTELD---PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLEL 187 (357)
T ss_pred HHHHHHhcCCEEeccC-------ChhhcC---ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhh
Confidence 9999999999888774 233332 357899999999999999876 667999999999999999999755
Q ss_pred hhhhhhhcCCCCCCCCcCC----CCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCCCC
Q 009181 316 VLPFAKKLGYPIPPFDFSV----QGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 316 ~~~f~~~~g~~~p~~~~~~----~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~ 390 (541)
.. .. .....++... ..-.++..++.|.. .++..+|+++ .++++......... ..+. + .
T Consensus 188 ~~---~~--~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i-~~~~~~~~~~~~~~-~~~~---------~-~ 250 (357)
T TIGR03539 188 GW---EG--RPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVA-GDPALVAELLTVRK-HAGL---------M-V 250 (357)
T ss_pred cc---CC--CCccceecccCCCccccEEEEeccccccCCCceeEEEEe-cCHHHHHHHHHHHh-hccc---------C-C
Confidence 42 10 0000111110 01136677889983 3444578866 44444332211110 0000 0 0
Q ss_pred CchHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceecc
Q 009181 391 GGLIAGAWAALMSLG-QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP 469 (541)
Q Consensus 391 ~~~~a~~~~al~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~ 469 (541)
...++.++...+. ....++..+...++++++.+.|++. ++.+. +|..+++.|...+.+..++.+.|.++|+.+..
T Consensus 251 --~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~-~p~~~~~~~~~~~~~~~~~~~~l~~~gV~v~p 326 (357)
T TIGR03539 251 --PAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFRID-HSEAGLYLWATRGEDAWDTVDRLAELGILVAP 326 (357)
T ss_pred --CHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCc-CCCccEEEEEECCCCHHHHHHHHHhCCEEECC
Confidence 1224444444443 3446667777778888999999886 77654 44555444433233667888999999987654
Q ss_pred CC-----CCCeEEEEecCCCHHHHHHHHHHH
Q 009181 470 LQ-----RPNSIHICVTLQHVAVVDVFLRDL 495 (541)
Q Consensus 470 ~~-----~~~~iRi~~~~~~~e~id~~i~~L 495 (541)
.. .++++|+|++. +.+++++++++|
T Consensus 327 g~~f~~~~~~~iRis~~~-~~~~i~~~~~~l 356 (357)
T TIGR03539 327 GDFYGPAGSQHVRVALTA-TDERIAAAVARL 356 (357)
T ss_pred ccccCCCCCCeEEEEecC-CHHHHHHHHHhh
Confidence 21 24799999986 458888888765
No 251
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.81 E-value=8.4e-18 Score=178.77 Aligned_cols=322 Identities=11% Similarity=0.127 Sum_probs=199.1
Q ss_pred CcccchHHHHHHHHHHHHHH-HHhCC--CC--CCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCcc
Q 009181 162 HLDIFQSVARFEAEVIAMTA-ALLGN--KE--KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAH 236 (541)
Q Consensus 162 ~~~~~~~~~~~e~ev~~~la-~l~g~--~~--~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h 236 (541)
+|...++..++.+++.++.. +.++. ++ .. +| ++|+|+++|+..++.++.....-.+| |+|+++.+.|
T Consensus 129 ~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~---~I--~vT~Ga~~al~~~~~aL~~~~ll~pG---D~Vlv~~P~y 200 (527)
T PRK09275 129 NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEF---DL--FAVEGGTAAMCYIFDSLKENGLLKAG---DKIALMTPIF 200 (527)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcC---eE--EEeCCHHHHHHHHHHHHhhhhcCCCC---CEEEEeCCCh
Confidence 46667777788877777443 33332 12 21 36 89999999999999875322222367 9999999999
Q ss_pred chHHHHHhhcCC--eEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHH--cCCEEE
Q 009181 237 SAYDKAAQYFNI--KLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALS--HGTCLH 307 (541)
Q Consensus 237 ~s~~ka~~~~G~--~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~--~~i~lh 307 (541)
+.+...+++.|. +++.++.++ +|++|+++++++++++++++++++|+||||.+.+ +++|+++|++ ++++++
T Consensus 201 ~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II 280 (527)
T PRK09275 201 TPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMII 280 (527)
T ss_pred HHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEE
Confidence 999999998865 455555443 5899999999999999999999999999999987 7788888964 599999
Q ss_pred EeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccc--------cccCC
Q 009181 308 VDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAV--------TEWSG 377 (541)
Q Consensus 308 vD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~--------~~~~~ 377 (541)
+|++|+.+...+ .+.... .+.-.++..++.|. ++.+| +|+++..++.......... .....
T Consensus 281 ~DEvY~~f~~~~-------~s~~~~-~~~~~I~v~SfSK~-f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~ 351 (527)
T PRK09275 281 TDDVYGTFVDDF-------RSLFAV-LPYNTILVYSFSKY-FGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYS 351 (527)
T ss_pred ECCCChhhcccc-------cCHHHh-CCCCEEEEeehhhh-ccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhh
Confidence 999998765311 000111 12235666788899 55555 8987765542111000000 00000
Q ss_pred CccCCC--------------ccc-CCCCCchHHHHHH-----HHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEE
Q 009181 378 GLYVSP--------------TVA-GSRPGGLIAGAWA-----ALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFI 435 (541)
Q Consensus 378 ~~~~~~--------------~~~-gsr~~~~~a~~~~-----al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v 435 (541)
.....| .+. ....+.....|++ ....+ +....++..+.+.++.+.+.+.| ++.+
T Consensus 352 ~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~~l~~~L----g~~~ 427 (527)
T PRK09275 352 SLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYKALYEGL----GLPE 427 (527)
T ss_pred hccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHc----CCCC
Confidence 000000 000 0001111112332 11112 23445666777777777787777 3332
Q ss_pred e-cCCCeeEEEE-ecCC-----------------CCHHHHHHHHHhC-Cceec-c--CCC-CCeEEEEecCCCHHHHHHH
Q 009181 436 I-GRPDMTIVAF-GSDV-----------------VDIFEVNDIMSSK-GWHLN-P--LQR-PNSIHICVTLQHVAVVDVF 491 (541)
Q Consensus 436 ~-~~~~~~~v~f-~~~~-----------------~~~~~l~~~l~~~-G~~~~-~--~~~-~~~iRi~~~~~~~e~id~~ 491 (541)
. .+|...+..| .... .+..+++.+|.++ |+.+. . ++. .+++|+|+...+.+++.+.
T Consensus 428 ~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~ 507 (527)
T PRK09275 428 PEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKI 507 (527)
T ss_pred cCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHH
Confidence 2 2455544443 3321 1456677777655 65432 2 332 3689999997777899999
Q ss_pred HHHHHHHHHHHHc
Q 009181 492 LRDLRESVETVKQ 504 (541)
Q Consensus 492 i~~L~~~~~~l~~ 504 (541)
.++|++++++..+
T Consensus 508 ~~rl~~~l~~y~~ 520 (527)
T PRK09275 508 GKAIRKLLDEYYE 520 (527)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887664
No 252
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.81 E-value=1.3e-17 Score=174.26 Aligned_cols=312 Identities=14% Similarity=0.066 Sum_probs=203.4
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ 240 (541)
-+|..+++..++|+ .+++++|.+. + ++|+|||+|+..+++++.+ +| ++| ++.+.+.++.
T Consensus 47 ~~Y~~~~g~~~Lee----aia~~~g~~~------v--v~t~~Gt~Al~la~~al~~-----pG---D~V-~~~~~f~~~~ 105 (431)
T cd00617 47 EAYAGSKSFYDLED----AVQDLFGFKH------I--IPTHQGRGAENILFSILLK-----PG---RTV-PSNMHFDTTR 105 (431)
T ss_pred CccCCCCCHHHHHH----HHHHHHCCCe------E--EEcCCHHHHHHHHHHHhCC-----CC---CEE-ccCCcccchH
Confidence 34667788877777 6677777752 4 8999999999999988753 67 776 5777777888
Q ss_pred HHHhhcCCeEEEeeCCC----------CCccCHHHHHHhhccC----ceEEEeecCCCCC-ccccC---HHHHHHHHHHc
Q 009181 241 KAAQYFNIKLWRVPVDK----------EFRADVKAIKKYINRN----TVLIVGSAPGFPH-GIIDP---IQELGELALSH 302 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~----------~~~~d~~~Le~~i~~~----t~~vv~~~~~~~~-G~id~---i~~I~~la~~~ 302 (541)
..+.+.|++++.+++++ .|.+|+++|+++|+++ +++|+++.|+|++ |.+.+ +++|.++|++|
T Consensus 106 ~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~ 185 (431)
T cd00617 106 GHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKY 185 (431)
T ss_pred HHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHc
Confidence 88999999999999973 2459999999999875 7899999999998 88865 66889999999
Q ss_pred CCEEEEeCCcccchhhhhh--hcCCCCCCCC-c---CCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccC
Q 009181 303 GTCLHVDLCLGGFVLPFAK--KLGYPIPPFD-F---SVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWS 376 (541)
Q Consensus 303 ~i~lhvD~a~gg~~~~f~~--~~g~~~p~~~-~---~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~ 376 (541)
|++||.|+|......-|.. .-|+.-..+. . -....|++++++||-+.+|. .|+++.+++++..........
T Consensus 186 gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~l~~~~~~~~~~-- 262 (431)
T cd00617 186 GIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDELYEEARQRVVL-- 262 (431)
T ss_pred CCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHHHHHHHHHhccc--
Confidence 9999999995322111110 0111000010 0 01235999999999876666 455666655454332110000
Q ss_pred CCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC------
Q 009181 377 GGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV------ 450 (541)
Q Consensus 377 ~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~------ 450 (541)
+..+...|.-.+..++++-.++.... + .+..++..+.+++|.+.|++. |+.+..|.....+.++...
T Consensus 263 ---~~~~~~~gG~~~r~~~A~A~gL~e~~-~--~~~l~~~~~~r~~l~~~L~~~-G~~v~~P~Ggh~v~~d~~~~~~~~~ 335 (431)
T cd00617 263 ---YEGFVTYGGMAGRDMEALAQGLREAV-E--EDYLRHRVEQVRYLGDRLDEA-GVPIVEPAGGHAVFIDAREFLPHIP 335 (431)
T ss_pred ---cCCccccccccHHHHHHHHHHHHhcc-c--HHHHHHHHHHHHHHHHHHHHC-CCCccCCCcceEEEEEhHHhcCCCC
Confidence 00111111111112233322332111 1 345666666779999999998 8988877667777776542
Q ss_pred ---CCHHHHHHHHHh-CCceeccC-----------C-----CCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHH
Q 009181 451 ---VDIFEVNDIMSS-KGWHLNPL-----------Q-----RPNSIHICVTL--QHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 451 ---~~~~~l~~~l~~-~G~~~~~~-----------~-----~~~~iRi~~~~--~~~e~id~~i~~L~~~~~~l~ 503 (541)
.+..+++.+|.+ .|+..... + ....+|++++. ++.+++|.+++.|..+.+.-.
T Consensus 336 ~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~ 410 (431)
T cd00617 336 QEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERRE 410 (431)
T ss_pred cccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhHh
Confidence 146677755554 45432211 0 12579999875 445999999999999887644
No 253
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.81 E-value=1.3e-17 Score=170.81 Aligned_cols=281 Identities=15% Similarity=0.130 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEec---CCccchHHHHHhh
Q 009181 169 VARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIP---VSAHSAYDKAAQY 245 (541)
Q Consensus 169 ~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~---~~~h~s~~ka~~~ 245 (541)
...+..++.+.+++++|.++++ + ++++||++|+..++.++.+ +| ++|+++ .+.|+++...++.
T Consensus 52 ~~~~~~~Le~~lA~~~g~~~e~----i--lv~~gg~~a~~~~~~al~~-----~g---d~Vli~~~d~p~~~s~~~~~~l 117 (346)
T TIGR03576 52 PAIFEEKVQELGREHLGGPEEK----I--LVFNRTSSAILATILALEP-----PG---RKVVHYLPEKPAHPSIPRSCKL 117 (346)
T ss_pred CHHHHHHHHHHHHHHcCCCcce----E--EEECCHHHHHHHHHHHhCC-----CC---CEEEECCCCCCCchhHHHHHHH
Confidence 4477888888999999997765 5 8999999999999998864 66 888864 5799999999999
Q ss_pred cCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccc---cCHHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 246 FNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGII---DPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 246 ~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~i---d~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
.|+++... + |+++++. .+++.+|+++. ++++|.+ .|+++|+++|++||++++||+||+.++...
T Consensus 118 ~ga~~~~~--~-----~l~~l~~--~~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~--- 184 (346)
T TIGR03576 118 AGAEYFES--D-----ELSELKK--IDGTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRL--- 184 (346)
T ss_pred cCCEEecc--C-----CHHHHhh--CcCceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCcccccccc---
Confidence 99986432 1 4555543 34677777764 6889998 789999999999999999999998765320
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHH
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALM 402 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~ 402 (541)
.|. .+. ...++|++..+++|+ +++...|+++. ++++..........|... - +...+++++.
T Consensus 185 ~~~-~~~---~~~~~divv~s~SKa-laG~r~G~v~~-~~~li~~l~~~~~~~~~s----------~---~~~~~~aa~~ 245 (346)
T TIGR03576 185 YGQ-PPA---LDLGADLVVTSTDKL-MDGPRGGLLAG-RKELVDKIKSVGEQFGLE----------A---QAPLLAAVVR 245 (346)
T ss_pred CCC-CCH---HHcCCcEEEeccchh-ccccceEEEEe-CHHHHHHHHHhhcCcccC----------c---cHHHHHHHHH
Confidence 111 011 122568888899996 43344676554 444444332222222110 0 1113333333
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCC-HHHHHHHHHhCCceeccC----CCCCeEE
Q 009181 403 SLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVD-IFEVNDIMSSKGWHLNPL----QRPNSIH 477 (541)
Q Consensus 403 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~-~~~l~~~l~~~G~~~~~~----~~~~~iR 477 (541)
.+.....+...+...++.+++.+.+++ +.+. ++..+++.++....+ .....+.|.++|+.+... +.++++|
T Consensus 246 aL~~~~~~~~~~~l~~r~~~~~~~l~~---~~~~-~~~~~f~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vR 321 (346)
T TIGR03576 246 ALEEFELSRIRDAFKRKEEVYLRLFDK---LNVE-RTPTGFVIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLR 321 (346)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHh---CCCC-cCCCeEEEEeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEE
Confidence 332222344556666666777777764 3333 334456666665433 345556777788765442 2357999
Q ss_pred EEecCCC-H-HHHHHHHHHHHHHH
Q 009181 478 ICVTLQH-V-AVVDVFLRDLRESV 499 (541)
Q Consensus 478 i~~~~~~-~-e~id~~i~~L~~~~ 499 (541)
||++... + .+.+++++.|++.+
T Consensus 322 is~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 322 FDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred EEEecChHHhcCHHHHHHHHHhcc
Confidence 9998532 1 26899999998764
No 254
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.81 E-value=2e-17 Score=161.28 Aligned_cols=297 Identities=19% Similarity=0.215 Sum_probs=204.1
Q ss_pred CCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 159 NPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 159 n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
|.+..-..|-+..+|+ .++.+=|.- .++.+++|..|+.+|+..+.. .| |+|+.+..-|-.
T Consensus 54 ~iYsRi~NPT~~vlE~----RiAaLEGG~--------aa~a~aSG~AA~~~ai~~la~-----aG---D~iVss~~LYGG 113 (426)
T COG2873 54 NIYTRIMNPTTDVLEE----RIAALEGGV--------AALAVASGQAAITYAILNLAG-----AG---DNIVSSSKLYGG 113 (426)
T ss_pred ceeeeccCchHHHHHH----HHHHhhcch--------hhhhhccchHHHHHHHHHhcc-----CC---CeeEeeccccCc
Confidence 3344445577777777 555554332 337789999999999998764 77 999988776654
Q ss_pred ----HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCccc
Q 009181 239 ----YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGG 314 (541)
Q Consensus 239 ----~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg 314 (541)
|....+.+|++++.|..+ |++.++++|++||++|++..-.||-+.+.|+++|+++||++|++++||...+.
T Consensus 114 T~~lf~~tl~~~Gi~v~fvd~~-----d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~at 188 (426)
T COG2873 114 TYNLFSHTLKRLGIEVRFVDPD-----DPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFAT 188 (426)
T ss_pred hHHHHHHHHHhcCcEEEEeCCC-----CHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCc
Confidence 556678889999999876 89999999999999999999999999999999999999999999999999876
Q ss_pred chhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCC----
Q 009181 315 FVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGS---- 388 (541)
Q Consensus 315 ~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs---- 388 (541)
.++ ++...-|+|++.-|..|| .++.| .|.+++-........ ...|+.-....|...|-
T Consensus 189 pyl------------~rP~~hGADIVvHS~TK~-igGhGt~iGG~iVD~G~FDw~~---~~rfP~~~~p~p~YhGl~~~~ 252 (426)
T COG2873 189 PYL------------CRPIEHGADIVVHSATKY-IGGHGTAIGGVIVDGGKFDWTA---NGRFPEFTTPDPSYHGLVYTE 252 (426)
T ss_pred cee------------cchhhcCCCEEEEeeccc-ccCCccccceEEEeCCcccccc---CCCCcccCCCCccccceehhh
Confidence 544 222456889999999999 45555 444555433221110 00011111111222221
Q ss_pred ----------------C-CCch--HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC---------
Q 009181 389 ----------------R-PGGL--IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD--------- 440 (541)
Q Consensus 389 ----------------r-~~~~--~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~--------- 440 (541)
| .|+. ....|..+ .|.+.+.-+.++..+++..+++.|++.|.+.-++-|.
T Consensus 253 ~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~l--qGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~l 330 (426)
T COG2873 253 TFGNAAFIIKARVQLLRDLGATLSPFNAFLLL--QGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHAL 330 (426)
T ss_pred hcccHHHHHHHHHHHHHhcccccCcHHHHHHH--hchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhH
Confidence 1 1111 12344443 4778888899999999999999999998877664322
Q ss_pred ---------eeEEEEecCCC--CHHHH------HHHHHhCC------ce--------ecc-----C-CCCCeEEEEecCC
Q 009181 441 ---------MTIVAFGSDVV--DIFEV------NDIMSSKG------WH--------LNP-----L-QRPNSIHICVTLQ 483 (541)
Q Consensus 441 ---------~~~v~f~~~~~--~~~~l------~~~l~~~G------~~--------~~~-----~-~~~~~iRi~~~~~ 483 (541)
.++++|..++. ...++ ...+..-| ++ ++. . -.|+.+|+|++.
T Consensus 331 a~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI- 409 (426)
T COG2873 331 AKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI- 409 (426)
T ss_pred HHhhccCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc-
Confidence 47899998765 12233 33333334 11 110 1 124789999997
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 009181 484 HVAVVDVFLRDLRESVET 501 (541)
Q Consensus 484 ~~e~id~~i~~L~~~~~~ 501 (541)
|+++.++.+|+++++.
T Consensus 410 --Ed~~DiiaDl~qAl~~ 425 (426)
T COG2873 410 --EDIDDIIADLEQALEA 425 (426)
T ss_pred --CCHHHHHHHHHHHHhc
Confidence 7889999999998753
No 255
>PLN02397 aspartate transaminase
Probab=99.81 E-value=1e-17 Score=176.64 Aligned_cols=317 Identities=13% Similarity=0.115 Sum_probs=198.3
Q ss_pred HHHHHHHHHhhcc-cCCCCcccchHHHHHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHH--HHHHHHHHHHHHH
Q 009181 145 FSLINEACSMFAH-TNPLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTES--ILLAVKSSRDYMR 219 (541)
Q Consensus 145 ~~~~~~~~~~~~~-~n~~~~~~~~~~~~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a--~~~al~a~r~~~~ 219 (541)
.+.+.++...... ....+|....|..++.+.+.+|+.+..+.+ +.. +...-+.+|+.+ +..++.+..+
T Consensus 68 ~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~----i~~~~i~~g~Ga~~l~~~~~~~~~--- 140 (423)
T PLN02397 68 LNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENR----VATVQCLSGTGSLRLGAEFLARFY--- 140 (423)
T ss_pred chHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCe----eEeeecccchHHHHHHHHHHHHhC---
Confidence 3455555444322 223467777888888887777765432211 111 211113344433 3334333322
Q ss_pred hhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC-C-CCCccCHHHHHHhhc---cCceEEEeecCCCCCccccC---
Q 009181 220 NKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV-D-KEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP--- 291 (541)
Q Consensus 220 ~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~-~-~~~~~d~~~Le~~i~---~~t~~vv~~~~~~~~G~id~--- 291 (541)
+| |+|+++++.|+.+...++..|++++.+|. + +++.+|++.+++.+. +++++++.++|+||||.+.+
T Consensus 141 --pG---d~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~ 215 (423)
T PLN02397 141 --PG---STIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQ 215 (423)
T ss_pred --CC---CEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHH
Confidence 66 99999999999999999999999999998 3 357899999888875 56899999999999999976
Q ss_pred HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCC-CcCCCC-ceEEEeCCCCCCCCC--CCceEEE--Eeccccc
Q 009181 292 IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF-DFSVQG-VTSISVDVHKYGLAP--KGTSVVL--YRNREIR 365 (541)
Q Consensus 292 i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~-~~~~~g-vdsis~~~hK~~~~p--~g~g~ll--~~~~~~~ 365 (541)
+++|+++|++||+++++|++|..+.. .....+.+.. .+...+ -.++..++.|. +++ ..+|+++ ..+++..
T Consensus 216 l~~i~~~a~~~~~~vI~De~Y~~l~~---~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~~~G~RvG~~v~~~~~~~~~ 291 (423)
T PLN02397 216 WEQISDLIKSKNHLPFFDSAYQGFAS---GDLDADAQSVRMFVEDGHEILVAQSYAKN-MGLYGERVGALSVVCKSADVA 291 (423)
T ss_pred HHHHHHHHHhCCcEEEEecccCCccC---CchhhhhHHHHHHHhcCCcEEEEEECccc-CCCccccceEEEEEeCCHHHH
Confidence 66789999999999999999987753 1000000000 011111 13556688899 554 4589875 3333322
Q ss_pred cc---cc-ccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHH--------HHHHHHHHHHHHHHHHHHHhhcCCC-
Q 009181 366 KH---QF-VAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQE--------GYLENTKAIMEVSESIQKGIKEIPE- 432 (541)
Q Consensus 366 ~~---~~-~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~--------g~~~~~~~~~~~a~~l~~~L~~~~~- 432 (541)
.. .. .....+. .+....++.++...+... .+++..++..++++.+.+.|+++ +
T Consensus 292 ~~~~~~~~~~~~~~~-------------~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~-~~ 357 (423)
T PLN02397 292 VRVKSQLKLIARPMY-------------SNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR-GS 357 (423)
T ss_pred HHHHHHHHHHHhccc-------------CCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 11 00 0000000 001122445554444321 25677788889999999999987 4
Q ss_pred ---eEEecCCCeeEEEEecCCCCHHHHHHHHHhC-CceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 433 ---LFIIGRPDMTIVAFGSDVVDIFEVNDIMSSK-GWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 433 ---~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~-G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
+++..+..+.+++...+ .++++.|.++ |+.+. ++. |++++..+.+++++++++|+++++
T Consensus 358 ~~~~~~~~p~gg~fl~~~l~----~~~~~~Ll~~~~V~v~----~~~-Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 358 PGDWSHITKQIGMFSFTGLN----KEQVDRMTKEYHIYMT----RDG-RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred CCCCCcccCCceEEEecCCC----HHHHHHHHHhCCEEEC----CCC-eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 66554433444444442 3577777654 66654 222 999987777999999999999974
No 256
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.81 E-value=4.4e-17 Score=171.03 Aligned_cols=302 Identities=12% Similarity=0.124 Sum_probs=191.9
Q ss_pred cccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH
Q 009181 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka 242 (541)
|...++...+.+.+.+++.+. +.++++ + ++|+|+++++...+ .+. .+| ++|+++.++|+.+...
T Consensus 71 Y~p~~g~~~lr~aia~~~~~~-~~~~d~----I--~it~Ga~~al~~l~-~l~-----~~g---d~Vlv~~P~y~~~~~~ 134 (402)
T TIGR03542 71 YGPEQGYPFLREAIAENDYRG-RIDPEE----I--FISDGAKCDVFRLQ-SLF-----GSD---NTVAVQDPVYPAYVDS 134 (402)
T ss_pred CCCCCCCHHHHHHHHHHHHhc-CCCHHH----E--EECCCcHHHHHHHH-Hhc-----CCC---CEEEEeCCCCcchHHH
Confidence 333455555665455443221 466665 7 89999999998753 322 255 8899999999999999
Q ss_pred HhhcCC-----------eEEEeeCCC--CCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEE
Q 009181 243 AQYFNI-----------KLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCL 306 (541)
Q Consensus 243 ~~~~G~-----------~v~~v~~~~--~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~l 306 (541)
++..|+ +++.+|.++ ++..|.+. .+++++|++++|+||||++.+ +++|.++|++|++++
T Consensus 135 ~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~i 209 (402)
T TIGR03542 135 NVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLI 209 (402)
T ss_pred HHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEE
Confidence 999999 999999864 34444321 256889999999999999987 788999999999999
Q ss_pred EEeCCcccchhhhhhhcCCCCCCCCcCC-CCceEEEeCCCCCC-CCCCCceEEEEeccccccccc-ccccccCCCccCCC
Q 009181 307 HVDLCLGGFVLPFAKKLGYPIPPFDFSV-QGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQF-VAVTEWSGGLYVSP 383 (541)
Q Consensus 307 hvD~a~gg~~~~f~~~~g~~~p~~~~~~-~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~-~~~~~~~~~~~~~~ 383 (541)
++|++|+.+.. +. ....+-..... .+..++..++.|.. ..+..+|+++...+ +..... .....|..- ...
T Consensus 210 I~De~y~~~~~---~~-~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~-l~~~~~~~~~~~~~~~-~~~- 282 (402)
T TIGR03542 210 LFDAAYSAFIS---DP-SLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKE-LTYADGHSVIQDWERR-QCT- 282 (402)
T ss_pred EEEchhhhhcc---CC-CCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHH-HhhcchhhHHHHHHHH-hhh-
Confidence 99999986643 10 00000011111 12245567888984 35556898776443 320000 000000000 000
Q ss_pred cccCCCCCchHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-CCHHHHHHH
Q 009181 384 TVAGSRPGGLIAGAWAALMSLGQ---EGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-VDIFEVNDI 459 (541)
Q Consensus 384 ~~~gsr~~~~~a~~~~al~~lg~---~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-~~~~~l~~~ 459 (541)
.. .+....++.++...+.. ....+..+...++++++.+.|++. ++++..+....++++++++ .+..++.+.
T Consensus 283 ~~----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~v~l~~~~~~~~l~~~ 357 (402)
T TIGR03542 283 KF----NGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-GFKVYGGEHAPYLWVKTPEGISSWDFFDF 357 (402)
T ss_pred cc----cCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-CceecCCCceeEEEEECCCCCCHHHHHHH
Confidence 00 00112244444444432 335556677778888899999886 7776655567788888765 367788888
Q ss_pred HH-hCCceecc---CCC--CCeEEEEecCCCHHHHHHHHHHHHHH
Q 009181 460 MS-SKGWHLNP---LQR--PNSIHICVTLQHVAVVDVFLRDLRES 498 (541)
Q Consensus 460 l~-~~G~~~~~---~~~--~~~iRi~~~~~~~e~id~~i~~L~~~ 498 (541)
|. +.|+.+.. ++. ++++|+++.. +.+++++.+++|+++
T Consensus 358 l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 358 LLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRENIVEACERIKEA 401 (402)
T ss_pred HHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHhh
Confidence 77 56876543 222 4789999764 568899998888765
No 257
>PRK04311 selenocysteine synthase; Provisional
Probab=99.81 E-value=6.7e-17 Score=170.17 Aligned_cols=293 Identities=16% Similarity=0.173 Sum_probs=190.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch------HHHHHhhcC
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA------YDKAAQYFN 247 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s------~~ka~~~~G 247 (541)
.++.+.+++++|.+. . +++++|+.|+.+++.++ .+| ++|+++...|++ +...++..|
T Consensus 130 ~~~e~~lA~l~Gae~------a--~vv~sgtaAl~l~l~~l------~~G---deVIvs~~e~~~~ggs~~i~~~~~~~G 192 (464)
T PRK04311 130 RALAALLCALTGAED------A--LVVNNNAAAVLLALNAL------AAG---KEVIVSRGELVEIGGAFRIPDVMRQAG 192 (464)
T ss_pred HHHHHHHHHHhCCCe------E--EEECCHHHHHHHHHHHh------CCC---CEEEEcchhhhhcCcchhhHHHHHHCC
Confidence 357779999999873 2 68888999999888654 256 899999876663 334567789
Q ss_pred CeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCC--Cc--cccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhc
Q 009181 248 IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFP--HG--IIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (541)
Q Consensus 248 ~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~--~G--~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~ 323 (541)
++++.|+++ ...++++++++|+++|++|++++++|+ +| ...|+++|+++|++||+++++|++.|.. .++ ...
T Consensus 193 ~~l~~v~~~--~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l-~~~-~~~ 268 (464)
T PRK04311 193 ARLVEVGTT--NRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSL-VDL-SQY 268 (464)
T ss_pred cEEEEECCC--CCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCccc-ccc-hhc
Confidence 999999764 345899999999999999999999997 34 5679999999999999999999975533 111 011
Q ss_pred CCC-CCC-CCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCC-CCchHHHHHHH
Q 009181 324 GYP-IPP-FDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSR-PGGLIAGAWAA 400 (541)
Q Consensus 324 g~~-~p~-~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr-~~~~~a~~~~a 400 (541)
|.. .|. .+....|+|++++++|||++|| .+|+++.++ ++..... . .+.....| .+..++++.++
T Consensus 269 gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp-~~G~i~g~~-~li~~l~-~----------~~~~r~lr~dk~~l~~l~~~ 335 (464)
T PRK04311 269 GLPDEPTVQELLAAGVDLVTFSGDKLLGGP-QAGIIVGKK-ELIARLK-K----------HPLKRALRVDKLTLAALEAT 335 (464)
T ss_pred cCCCCCchhhHHhcCCcEEEecCcccccCC-ceEEEEEcH-HHHHHHh-h----------chhHHHHhcchHHHHHHHHH
Confidence 100 111 2234579999999999997677 478666554 3332110 0 00000112 12334555555
Q ss_pred HHHH-hH----------HHHHHHHHHHHHHHHHHHHHhhcCC--C--eEEecC---------CC----eeEEEEecCCCC
Q 009181 401 LMSL-GQ----------EGYLENTKAIMEVSESIQKGIKEIP--E--LFIIGR---------PD----MTIVAFGSDVVD 452 (541)
Q Consensus 401 l~~l-g~----------~g~~~~~~~~~~~a~~l~~~L~~~~--~--~~v~~~---------~~----~~~v~f~~~~~~ 452 (541)
+..+ .. .-+....++..++++.+.+.|++.+ + +++... |. ...|.+...+.+
T Consensus 336 l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~ 415 (464)
T PRK04311 336 LRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRS 415 (464)
T ss_pred HHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCC
Confidence 5433 11 1133344677778888888888753 3 344422 11 234445544557
Q ss_pred HHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 453 IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 453 ~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
..++.++|++....+-..-..+.+.+-+-....+|.+.+++.|++++.
T Consensus 416 ~~~l~~~lr~~~~~i~~r~~~~~~~ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 416 LEALAARLRLLPPPVIGRIEDGRLLLDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred HHHHHHHHhcCCCCEEEEEECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 889999988754322222233566676655566899999999988753
No 258
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.81 E-value=3e-17 Score=164.15 Aligned_cols=290 Identities=19% Similarity=0.195 Sum_probs=208.9
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-------------HHH
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-------------YDK 241 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-------------~~k 241 (541)
++.+.+++..+ ..+. + .|+++|+||+..|++.+|.+.. +-.+.+||....++.. +.+
T Consensus 88 ~la~~L~~~s~-~~d~----v--ff~NSGaEA~EaAiKlARk~~~---~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~ 157 (404)
T COG4992 88 ELAEKLVELSP-FADR----V--FFCNSGAEANEAALKLARKYTG---DPEKSKIIAFENSFHGRTLGALSATGQPKYRK 157 (404)
T ss_pred HHHHHHHhhCc-cccE----E--EEcCCcHHHHHHHHHHHHHHcC---CCCCcEEEEEcCCcCCccceeeeccCChhhcc
Confidence 46667777776 3332 5 8999999999999999998765 2223567766555433 222
Q ss_pred HHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEeCCcccchh
Q 009181 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLGGFVL 317 (541)
Q Consensus 242 a~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD~a~gg~~~ 317 (541)
...-+=-.+++||.+ |+++++++|+++|.+|++....-.-|++-+ ++++.++|++||++|+.|+++.|+-.
T Consensus 158 ~F~Pl~~g~~~vpfn-----Di~al~~ai~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GR 232 (404)
T COG4992 158 GFGPLLPGFRHVPFN-----DIEALEAAIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGR 232 (404)
T ss_pred CCCCCCCCceecCCC-----CHHHHHHHhccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCc
Confidence 222111257778877 999999999999999999999998888865 88999999999999999999987632
Q ss_pred hhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHH
Q 009181 318 PFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIA 395 (541)
Q Consensus 318 ~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a 395 (541)
.|. -|.+...|| |+++.. |.+.++..+|+++.+ +... ...++..+||.+|.+..
T Consensus 233 -----TGk---~fA~e~~gV~PDI~tla--K~LgGG~PigA~la~-~~~~-------------~~~~~G~HgSTfGGNpL 288 (404)
T COG4992 233 -----TGK---LFAYEHYGVEPDILTLA--KALGGGFPIGAMLAT-EEIA-------------SAFTPGDHGSTFGGNPL 288 (404)
T ss_pred -----cch---HHHHHHhCCCCCEEEee--ccccCCccceeeEEc-hhhh-------------hcCCCCcccCCCCcCHH
Confidence 221 122333344 777765 888788889988887 3322 12366778888888877
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecC--CCeeEEEEecCCC-CHHHHHHHHHhCCceeccCC
Q 009181 396 GAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGR--PDMTIVAFGSDVV-DIFEVNDIMSSKGWHLNPLQ 471 (541)
Q Consensus 396 ~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~f~~~~~-~~~~l~~~l~~~G~~~~~~~ 471 (541)
++.++...+..-.-++..++..+..++|.+.|+++ ..+.++.+ ...-++-+.+... ...++...+.++|..+...+
T Consensus 289 acAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a~ 368 (404)
T COG4992 289 ACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPYRARDIVRALREEGVLVLPAG 368 (404)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcccHHHHHHHHHHCCeEEecCC
Confidence 77777766665555677788888888899988875 22223322 2345666666543 47899999999997665443
Q ss_pred CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 472 RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 472 ~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
++.+|+.++...+ +++++.+++|+++++....
T Consensus 369 -~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 369 -PNVIRFLPPLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred -CCeEEecCCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 4689998887655 9999999999999986543
No 259
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.81 E-value=3.4e-17 Score=171.97 Aligned_cols=289 Identities=19% Similarity=0.173 Sum_probs=182.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCC--CCeEEecCCc-cchHHHHHhhc---
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGIT--RPEMIIPVSA-HSAYDKAAQYF--- 246 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~--~~~vi~~~~~-h~s~~ka~~~~--- 246 (541)
..++.+.++++++.+ . + +++++||+|+..|++++|.+....+|.. +++|++.... |.+...+....
T Consensus 85 ~~~l~~~l~~~~~~~--~----~--~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~ 156 (401)
T PRK00854 85 LAPLYEELAALTGSH--K----V--LPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDP 156 (401)
T ss_pred HHHHHHHHHhhCCCC--E----E--EEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCc
Confidence 334555777787753 2 4 8999999999999999987533222332 3566666554 55433332211
Q ss_pred ---------CCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEeCCcc
Q 009181 247 ---------NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 247 ---------G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD~a~g 313 (541)
...+..+|. .|++++++++.+++++|+++++++|+|.+.| +++|.++|++||+++++|++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~ 231 (401)
T PRK00854 157 DARGGFGPFTPGFRVVPF-----GDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT 231 (401)
T ss_pred cccccCCCCCCCeEEeCC-----CCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 123444443 3899999999999999999999999999987 9999999999999999999997
Q ss_pred cchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCC-CceEEEEecccccccccccccccCCCccCCCcccCCCC
Q 009181 314 GFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~ 390 (541)
|+.. .|. .+.....| .|.++++ |++.+.. .+|+++.+++ +..... ....+. + .
T Consensus 232 g~g~-----~g~---~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~-~~~~l~---~~~~~~-----t-----~ 287 (401)
T PRK00854 232 GLGR-----TGK---LLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNSE-VLGVLK---PGQHGS-----T-----F 287 (401)
T ss_pred CCCC-----Cch---HhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcHH-HHhccc---CCCCCC-----C-----C
Confidence 6532 110 01111112 3666654 8865543 4777666543 322110 000001 1 1
Q ss_pred CchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEec--CCCeeEEEEecCC--CCHHHHHHHHHhCCce
Q 009181 391 GGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIG--RPDMTIVAFGSDV--VDIFEVNDIMSSKGWH 466 (541)
Q Consensus 391 ~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~f~~~~--~~~~~l~~~l~~~G~~ 466 (541)
+.....+++++..+..-.-.+..++..++++++.+.|+++.. ..+. .+...++.+...+ .+..++.+.|.++|+.
T Consensus 288 ~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~ 366 (401)
T PRK00854 288 GGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRS-NIVREVRGRGLMLAVELEPEAGGARQYCEALKERGLL 366 (401)
T ss_pred CcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhcc-CceEEEeccceEEEEEEecCchhHHHHHHHHHHCCeE
Confidence 112334444444442211134678888889999999988632 2221 2334555554422 3567899999999987
Q ss_pred eccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHH
Q 009181 467 LNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVE 500 (541)
Q Consensus 467 ~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~ 500 (541)
+...+ ++.+|++++..++ +++++++++|++++.
T Consensus 367 v~~~~-~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 367 AKDTH-DHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred EecCC-CCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 75432 3689999876555 999999999998763
No 260
>PRK07505 hypothetical protein; Provisional
Probab=99.81 E-value=1.8e-17 Score=174.05 Aligned_cols=299 Identities=14% Similarity=0.109 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH--Hhhc
Q 009181 169 VARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA--AQYF 246 (541)
Q Consensus 169 ~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka--~~~~ 246 (541)
..+...++.+.+++++|. .. +++++|++|+..+++.++..... +| +...|+.....|+++... ....
T Consensus 89 ~~~~~~~l~~~la~~~~~--~~-------~~~~sG~~a~~~ai~~~~~~~~~-~~-~~~vi~~~~~~H~s~~~~~~~~~~ 157 (402)
T PRK07505 89 RSQILKDLEEALSELFGA--SV-------LTFTSCSAAHLGILPLLASGHLT-GG-VPPHMVFDKNAHASLNILKGICAD 157 (402)
T ss_pred hhHHHHHHHHHHHHHhCC--CE-------EEECChHHHHHHHHHHHHhcccC-CC-CCCEEEEchhhhHhHHhhhhhhhc
Confidence 345566788899999987 32 55556788999999876532111 11 113345556788886432 2223
Q ss_pred CCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCC-
Q 009181 247 NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGY- 325 (541)
Q Consensus 247 G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~- 325 (541)
+.+++.+|.+ |++++++++++++.+++++.|+||+|.+.|+++|.++|++||++|++|++|+...+ ...|.
T Consensus 158 ~~~v~~~~~~-----d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~---g~~g~~ 229 (402)
T PRK07505 158 ETEVETIDHN-----DLDALEDICKTNKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIY---GKNGEG 229 (402)
T ss_pred CCeEEEeCCC-----CHHHHHHHHhcCCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCc---CCCCCc
Confidence 5688888874 89999999988888999999999999999999999999999999999999842111 01110
Q ss_pred -CCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHH
Q 009181 326 -PIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL 404 (541)
Q Consensus 326 -~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l 404 (541)
..+.+.........++.++.|. +++.| |+++..++++..........| +..++......++..++++.+
T Consensus 230 ~~~~~~~~~~~d~~i~~~s~sK~-~~~~G-g~~~~~~~~~~~~~~~~~~~~--------t~~~~~~~~a~aa~~a~l~~~ 299 (402)
T PRK07505 230 YVRSELDYRLNERTIIAASLGKA-FGASG-GVIMLGDAEQIELILRYAGPL--------AFSQSLNVAALGAILASAEIH 299 (402)
T ss_pred hHHHHcCCCCCCCeEEEEechhh-hhccC-eEEEeCCHHHHHHHHHhCCCc--------eeCCCCCHHHHHHHHHHHHHH
Confidence 0011211123445666788897 44444 665555554443221111111 111222222344555565545
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-CHHHHHHHHHhCCceeccCCC------CCeEE
Q 009181 405 GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV-DIFEVNDIMSSKGWHLNPLQR------PNSIH 477 (541)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~-~~~~l~~~l~~~G~~~~~~~~------~~~iR 477 (541)
..+.+.+..++..++.+.+.+.+... .......+..+...+. +..++.+.|.++|+.+..... ++.+|
T Consensus 300 ~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lR 374 (402)
T PRK07505 300 LSEELDQLQQKLQNNIALFDSLIPTE-----QSGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLR 374 (402)
T ss_pred hccCcHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEE
Confidence 55555555555555554444332211 1112233333333321 356889999999987754322 25899
Q ss_pred EEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 478 ICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 478 i~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
++++..++ ++++++++.|++++++
T Consensus 375 i~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 375 IMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred EecCccCCHHHHHHHHHHHHHHHHh
Confidence 99987666 9999999999998754
No 261
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.80 E-value=2.7e-17 Score=174.66 Aligned_cols=317 Identities=14% Similarity=0.121 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHHHHhCC---CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhh
Q 009181 169 VARFEAEVIAMTAALLGN---KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY 245 (541)
Q Consensus 169 ~~~~e~ev~~~la~l~g~---~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~ 245 (541)
....|+.+.+++.+.++. +++. .++ ++|+|+++|+..++.++.....-.+| ++|+++.+.++.+...++.
T Consensus 131 ~~~~e~iv~~y~~~~~~~~~~~~~~--~~V--~it~Gat~al~~~~~~l~~~~ll~pG---D~Vlv~~P~y~~y~~~~~l 203 (521)
T TIGR03801 131 LPHSEKIVHQYLIQEMCGNKPPPGE--FDL--FAVEGGTAAMCYIFDSLKANELLKKG---DKIALMTPIFTPYLEIPEL 203 (521)
T ss_pred HHHHHHHHHHHHHhhccCCCCCCCc--CeE--EEeCCHHHHHHHHHHHHhHhhcCCCC---CEEEEeCCCcHHHHHHHHH
Confidence 334444444566665443 2220 036 89999999999998874322222367 9999999999999999888
Q ss_pred c--CCeEEEeeCCC--C-----CccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHc--CCEEEEeCC
Q 009181 246 F--NIKLWRVPVDK--E-----FRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSH--GTCLHVDLC 311 (541)
Q Consensus 246 ~--G~~v~~v~~~~--~-----~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~--~i~lhvD~a 311 (541)
. |++++.|+.++ + |++|.++++++++++++++++++|+||||.+.+ +++|+++|++| ++++++|++
T Consensus 204 ~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEv 283 (521)
T TIGR03801 204 PRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDV 283 (521)
T ss_pred hcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCC
Confidence 6 67788888753 2 889999999999999999999999999999987 77888889987 999999999
Q ss_pred cccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCC-CCCCCceEEEEecccccc---------------ccccccccc
Q 009181 312 LGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRK---------------HQFVAVTEW 375 (541)
Q Consensus 312 ~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~---------------~~~~~~~~~ 375 (541)
|+.|...+. +.... .+.-.++..++.|.. ..+..+|+++..++.... ..|.....-
T Consensus 284 Y~~f~~~~~-------sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~ 355 (521)
T TIGR03801 284 YGTFVDDFR-------SLFAE-LPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTE 355 (521)
T ss_pred chhhccccc-------chhhh-CCCCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCC
Confidence 987653211 11111 122356677888983 244458987765432110 000000000
Q ss_pred CCCc-cC------CCccc-CCCCCchHHHHH-----HHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEe-cCC
Q 009181 376 SGGL-YV------SPTVA-GSRPGGLIAGAW-----AALMSL--GQEGYLENTKAIMEVSESIQKGIKEIPELFII-GRP 439 (541)
Q Consensus 376 ~~~~-~~------~~~~~-gsr~~~~~a~~~-----~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~~ 439 (541)
+... +. +.... ....+.....++ ++...+ +....++..+.+.++.+.+.+.| |+.+. .++
T Consensus 356 p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~~~~~~~~~R~~~l~~~L----g~~~~~~~~ 431 (521)
T TIGR03801 356 PRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKAETKDICRRREKLLFRGL----GLPLQEDPN 431 (521)
T ss_pred hhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhc----CCCCcCCCC
Confidence 0000 00 00000 000111111122 122222 23445566667777777777777 33332 345
Q ss_pred CeeEE-EEecCC-----------------CCHHHHHHHHHhC-Cceec-c--CCC-CCeEEEEecCCCHHHHHHHHHHHH
Q 009181 440 DMTIV-AFGSDV-----------------VDIFEVNDIMSSK-GWHLN-P--LQR-PNSIHICVTLQHVAVVDVFLRDLR 496 (541)
Q Consensus 440 ~~~~v-~f~~~~-----------------~~~~~l~~~l~~~-G~~~~-~--~~~-~~~iRi~~~~~~~e~id~~i~~L~ 496 (541)
...+. +++... .+..+++.+|.++ |+.+. . ++. .+++|+|+...+.+++.+..++|+
T Consensus 432 ~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~ 511 (521)
T TIGR03801 432 DVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIR 511 (521)
T ss_pred CeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHH
Confidence 54443 334431 1345677666654 65542 2 232 257999998777789999999999
Q ss_pred HHHHHHHc
Q 009181 497 ESVETVKQ 504 (541)
Q Consensus 497 ~~~~~l~~ 504 (541)
+++++..+
T Consensus 512 ~~~~~~~~ 519 (521)
T TIGR03801 512 KILDEYYE 519 (521)
T ss_pred HHHHHHHH
Confidence 99877643
No 262
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.80 E-value=3.3e-17 Score=169.70 Aligned_cols=298 Identities=13% Similarity=0.044 Sum_probs=189.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEe
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v 253 (541)
+++.+++++++|.+. + ++|+|||+|+.+++.++. -++| ++|+++..+|++...++...|++++.+
T Consensus 34 ~~~e~~la~~~g~~~------~--v~~~sgt~aL~~~l~al~----~~pG---d~Viv~~~t~~~~~~~~~~~G~~~v~v 98 (376)
T TIGR02379 34 RRCETWLENRTGTKK------A--LLTPSCTAALEMAALLLD----IQPG---DEVIMPSYTFVSTANAFVLRGAKIVFV 98 (376)
T ss_pred HHHHHHHHHHhCCCe------E--EEeCCHHHHHHHHHHHcC----CCCc---CEEEECCCCcHHHHHHHHHcCCEEEEE
Confidence 344457888887742 4 899999999999888761 1366 999999999999999999999999999
Q ss_pred eCCC-CCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCc
Q 009181 254 PVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (541)
Q Consensus 254 ~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~ 332 (541)
++++ ++.+|+++++++++++|++|+. ++++|...|+++|.++|++||+++++|+|++.+.. + .|..+ .
T Consensus 99 d~d~~~~~~d~~~le~~i~~~tk~Iip---~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~-~---~~~~~---g- 167 (376)
T TIGR02379 99 DIRPDTMNIDETLIESAITHRTKAIVP---VHYAGVACDMDTIMALANKHQLFVIEDAAQGVMST-Y---KGRAL---G- 167 (376)
T ss_pred ecCCCcCCCCHHHHHHhcCcCceEEEE---eCCCCCccCHHHHHHHHHHCCCEEEEECccccCCc-c---CCccc---C-
Confidence 9986 5789999999999999999874 45689999999999999999999999999874431 0 11101 0
Q ss_pred CCCCceEEEeCCCCCCCCCCCceEEEEeccccccccccccc-ccCC-----Cc--cCCCcccCCCCCchHHHHHHHHHHH
Q 009181 333 SVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVT-EWSG-----GL--YVSPTVAGSRPGGLIAGAWAALMSL 404 (541)
Q Consensus 333 ~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~-~~~~-----~~--~~~~~~~gsr~~~~~a~~~~al~~l 404 (541)
....+.++|+...|.+..+...|++++.++++......... .+.. +. .......|.+.... ..-+++-.-
T Consensus 168 ~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~--~~~Aa~g~~ 245 (376)
T TIGR02379 168 SIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPS--ELQAAYLWA 245 (376)
T ss_pred CCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCcc--HHHHHHHHH
Confidence 11123445555555543333467778877765543322111 0000 00 00001123222211 122333223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCC--C-eEEecCC-C----eeEEEEecCC-CCHHHHHHHHHhCCceecc------
Q 009181 405 GQEGYLENTKAIMEVSESIQKGIKEIP--E-LFIIGRP-D----MTIVAFGSDV-VDIFEVNDIMSSKGWHLNP------ 469 (541)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~--~-~~v~~~~-~----~~~v~f~~~~-~~~~~l~~~l~~~G~~~~~------ 469 (541)
..+.+++..++.++.+++..+.|+.++ + +++...+ . ...+++..+. .+..++.+.|.++|+....
T Consensus 246 qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~r~~l~~~L~~~gI~~~~~~~p~~ 325 (376)
T TIGR02379 246 QLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDEDDRNELIKYLKEQEIMAVFHYVPLH 325 (376)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCcCCHHHHHHHHHHCCCCccccCcCCC
Confidence 346678888999999999999998764 2 2332211 1 1234444443 3678999999999954321
Q ss_pred -------CC-----CC-------CeEEEEec-CCCHHHHHHHHHHHHHHH
Q 009181 470 -------LQ-----RP-------NSIHICVT-LQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 470 -------~~-----~~-------~~iRi~~~-~~~~e~id~~i~~L~~~~ 499 (541)
++ .| ..+.+-+. .++.+|+++.++.|+++.
T Consensus 326 ~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 326 SSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred cchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 00 01 12333222 233489999999998764
No 263
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.80 E-value=1.1e-17 Score=181.39 Aligned_cols=309 Identities=12% Similarity=0.042 Sum_probs=209.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH-HhhcCCeEE
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA-AQYFNIKLW 251 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka-~~~~G~~v~ 251 (541)
-.+.++..++.||++... .+|+|+|.+|..+++++.. +| +.|+++..+|-|+..+ +.+.|+.++
T Consensus 176 i~eAq~~AA~~fgAd~ty-------FlvNGTS~gn~a~i~a~~~-----~G---d~VLvdRN~HKSv~hgaLiLsGa~PV 240 (720)
T PRK13578 176 AKDAQKHAAKVFNADKTY-------FVLNGTSASNKVVTNALLT-----PG---DLVLFDRNNHKSNHHGALIQAGATPV 240 (720)
T ss_pred HHHHHHHHHHHhCCCceE-------EEeCChhHHHHHHHHHhcC-----CC---CEEEeecccHHHHHHHHHHHcCCeEE
Confidence 345666999999998764 8999999999999998864 77 9999999999999985 889999999
Q ss_pred EeeCCC-----CCccCH-----HHHHHhhccC----------ceEEEeecCCCCCccccCHHHHHHH-HHHcCCEEEEeC
Q 009181 252 RVPVDK-----EFRADV-----KAIKKYINRN----------TVLIVGSAPGFPHGIIDPIQELGEL-ALSHGTCLHVDL 310 (541)
Q Consensus 252 ~v~~~~-----~~~~d~-----~~Le~~i~~~----------t~~vv~~~~~~~~G~id~i~~I~~l-a~~~~i~lhvD~ 310 (541)
+++..- -+.++. +.++++|.++ .+++++++||+ .|++.|+++|+++ +++++ +||||+
T Consensus 241 Yl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDE 318 (720)
T PRK13578 241 YLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDS 318 (720)
T ss_pred EeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeC
Confidence 997642 123554 4589888765 48899999988 9999999999999 68888 999999
Q ss_pred CcccchhhhhhhcCCCCCCCCcCCCCce----EEEeCCCCCCCCCCCceEEEEecccccc-cccccccccCCCccCCCcc
Q 009181 311 CLGGFVLPFAKKLGYPIPPFDFSVQGVT----SISVDVHKYGLAPKGTSVVLYRNREIRK-HQFVAVTEWSGGLYVSPTV 385 (541)
Q Consensus 311 a~gg~~~~f~~~~g~~~p~~~~~~~gvd----sis~~~hK~~~~p~g~g~ll~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 385 (541)
|||+... |..... ..|+.. ...|.| +++-|+||.+.+-..++++.+++..+.. ..+...... .....-..
T Consensus 319 Ahgah~~-F~p~~~-~~p~~a-l~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~--~~al~m~q 393 (720)
T PRK13578 319 AWVGYEQ-FIPMMA-DCSPLL-LELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRL--NNAFMLHA 393 (720)
T ss_pred cchhhhc-cCcccc-cCChhh-hhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHH--HHHHHHHc
Confidence 9987653 322100 022222 235677 8999999998888888988886643210 000000000 00000011
Q ss_pred cCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-hcCCCeEEecCC-------------------------
Q 009181 386 AGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGI-KEIPELFIIGRP------------------------- 439 (541)
Q Consensus 386 ~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L-~~~~~~~v~~~~------------------------- 439 (541)
..|.+..+++++-.+-+.+....-++..++..+.+..+++.| +..++++++.++
T Consensus 394 STSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~ 473 (720)
T PRK13578 394 STSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFE 473 (720)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccc
Confidence 223444566777776555543344667777888888888888 667788877421
Q ss_pred ------------------CeeEEEEecCCCC------------HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHH
Q 009181 440 ------------------DMTIVAFGSDVVD------------IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVV 488 (541)
Q Consensus 440 ------------------~~~~v~f~~~~~~------------~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~i 488 (541)
+..=+.+..++.+ ...+.+.|.++|+.....+ ...+-+-++..++ +++
T Consensus 474 p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d-~~~vL~l~s~g~t~~~~ 552 (720)
T PRK13578 474 PGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCD-LNSILFLLTPAEDMAKL 552 (720)
T ss_pred cCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecC-CCeEEEEeCCCCCHHHH
Confidence 0111222223334 6889999988887654433 3345555665555 899
Q ss_pred HHHHHHHHHHHHHHHc
Q 009181 489 DVFLRDLRESVETVKQ 504 (541)
Q Consensus 489 d~~i~~L~~~~~~l~~ 504 (541)
++++++|.++-+....
T Consensus 553 ~~Lv~aL~~f~~~~~~ 568 (720)
T PRK13578 553 QQLVAMLARFEKHIED 568 (720)
T ss_pred HHHHHHHHHHHHhhcc
Confidence 9999999988554443
No 264
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.80 E-value=3e-17 Score=169.76 Aligned_cols=269 Identities=19% Similarity=0.122 Sum_probs=176.7
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhh
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY 245 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~ 245 (541)
.+.+.++|+ .+++++|.+. + +.+++||.|+.+|+.++.- ++| ++|++|..++++...++..
T Consensus 24 g~~~~~fE~----~~a~~~g~~~------~--~~~~sgt~Al~~al~~l~~----~~g---deVi~p~~t~~~~~~ai~~ 84 (363)
T PF01041_consen 24 GPYVEEFEK----EFAEYFGVKY------A--VAVSSGTSALHLALRALGL----GPG---DEVIVPAYTFPATASAILW 84 (363)
T ss_dssp SHHHHHHHH----HHHHHHTSSE------E--EEESSHHHHHHHHHHHTTG----GTT---SEEEEESSS-THHHHHHHH
T ss_pred CHHHHHHHH----HHHHHhCCCe------E--EEeCChhHHHHHHHHhcCC----CcC---ceEecCCCcchHHHHHHHH
Confidence 566777777 7778888653 2 8999999999999999532 366 9999999999999999999
Q ss_pred cCCeEEEeeCC-CCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcC
Q 009181 246 FNIKLWRVPVD-KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLG 324 (541)
Q Consensus 246 ~G~~v~~v~~~-~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g 324 (541)
.|++++.++++ +++.+|+++++++|+++|++|++++. .|...|+++|.++|+++|++|+.|+|++.+..- .|
T Consensus 85 ~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~----~g 157 (363)
T PF01041_consen 85 AGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVHL---FGNPADMDAIRAIARKHGIPLIEDAAQAFGARY----KG 157 (363)
T ss_dssp TT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE-G---GGB---HHHHHHHHHHTT-EEEEE-TTTTT-EE----TT
T ss_pred hccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEecC---CCCcccHHHHHHHHHHcCCcEEEccccccCcee----CC
Confidence 99999999999 59999999999999999999999986 799999999999999999999999998644321 11
Q ss_pred CCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEeccccccccccccc-ccCCCccC--CCcc-cCCCCCchHHHHHHH
Q 009181 325 YPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVT-EWSGGLYV--SPTV-AGSRPGGLIAGAWAA 400 (541)
Q Consensus 325 ~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~-~~~~~~~~--~~~~-~gsr~~~~~a~~~~a 400 (541)
..+ -....+-++|+...|.. .....|+++++++++......... .+...... .... .|...... ..-++
T Consensus 158 ~~~----G~~gd~~~fSf~~~K~i-~~geGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~--~~~AA 230 (363)
T PF01041_consen 158 RPV----GSFGDIAIFSFHPTKII-TTGEGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMS--ELQAA 230 (363)
T ss_dssp EET----TSSSSEEEEESSTTSSS--SSS-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-B--HHHHH
T ss_pred Eec----cCCCCceEecCCCCCCC-cCCCCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccH--HHHHH
Confidence 000 01112345555556885 333357777777665443211111 11000000 0000 22222222 33444
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC------eeEEEEecCCC---CHHHHHHHHHhCCcee
Q 009181 401 LMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD------MTIVAFGSDVV---DIFEVNDIMSSKGWHL 467 (541)
Q Consensus 401 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~------~~~v~f~~~~~---~~~~l~~~l~~~G~~~ 467 (541)
+.....+.+++..++..++++++.+.|.+++++.....+. ...+.+..++. +..++.+.|.++|+..
T Consensus 231 igl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~ 306 (363)
T PF01041_consen 231 IGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIET 306 (363)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEE
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCcc
Confidence 4444557789999999999999999999999987765433 22345555543 6789999999999543
No 265
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.80 E-value=2.1e-17 Score=174.18 Aligned_cols=296 Identities=21% Similarity=0.146 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhc--
Q 009181 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYF-- 246 (541)
Q Consensus 170 ~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~-- 246 (541)
.....++.+.+++++|.+.+. + ++++||++|+..|+++++... .+ ++|++.+..+.. ...+....
T Consensus 78 ~~~~~~l~~~l~~~~~~~~~~----v--~~~~sgsea~~~al~~~~~~~---~~---~~ii~~~~~yhg~~~~~~~~~~~ 145 (413)
T cd00610 78 NEPAVELAELLLALTPEGLDK----V--FFVNSGTEAVEAALKLARAYT---GR---KKIISFEGAYHGRTLGALSLTGS 145 (413)
T ss_pred CHHHHHHHHHHHHhCCCCCCE----E--EEcCcHHHHHHHHHHHHHHHc---CC---CeEEEECCCcCCccHHHHHhcCC
Confidence 456677888999999865444 5 899999999999999987532 22 678777765444 33333322
Q ss_pred ----------CCeEEEeeCCC------CCccCHHHHHHhhcc---CceEEEeecCCCCCccccC----HHHHHHHHHHcC
Q 009181 247 ----------NIKLWRVPVDK------EFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP----IQELGELALSHG 303 (541)
Q Consensus 247 ----------G~~v~~v~~~~------~~~~d~~~Le~~i~~---~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~ 303 (541)
+.+++.+|.++ ++..|+++|++++++ ++.+++++..++++|.+.+ +++|.++|++||
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~ 225 (413)
T cd00610 146 KKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHG 225 (413)
T ss_pred ccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 22467777763 345589999999976 5778888888888899877 999999999999
Q ss_pred CEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCC
Q 009181 304 TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSP 383 (541)
Q Consensus 304 i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (541)
+++++|++|+++... .. +. .++......|.++++ |++.++..+|+++.+ +++.... . ...+. ...
T Consensus 226 ~~li~Dev~~g~g~~--g~-~~---~~~~~~~~~d~~t~s--K~l~~g~~~g~~~~~-~~~~~~~-~-~~~~~----~~~ 290 (413)
T cd00610 226 ILLIADEVQTGFGRT--GK-MF---AFEHFGVEPDIVTLG--KGLGGGLPLGAVLGR-EEIMDAF-P-AGPGL----HGG 290 (413)
T ss_pred CEEEEeccccCCCcC--cc-hh---hHhhcCCCCCeEEEc--ccccCccccEEEEEc-HHHHHhh-c-cCCCC----CCC
Confidence 999999999875220 00 00 011111123655554 987666778987654 4443321 0 00000 000
Q ss_pred cccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCC---CeEEecCCCeeEEEEecCC---------C
Q 009181 384 TVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIP---ELFIIGRPDMTIVAFGSDV---------V 451 (541)
Q Consensus 384 ~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~~~~~~~v~f~~~~---------~ 451 (541)
+..+. ....+++.++++.+.. .+..++..++.+++++.|+++. ++.....+...++++.+.+ .
T Consensus 291 t~~~~--~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 365 (413)
T cd00610 291 TFGGN--PLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKE 365 (413)
T ss_pred CCCcC--HHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchH
Confidence 11111 1123456666665544 3566777788888888887642 1111113446777777643 2
Q ss_pred CHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHH
Q 009181 452 DIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRES 498 (541)
Q Consensus 452 ~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~ 498 (541)
+..++.+.|.++|+.+.... ++.+|++++..++ +++++++++|+++
T Consensus 366 ~~~~~~~~l~~~gv~v~~~~-~~~lR~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 366 LAAKIIKAALERGLLLRPSG-GNVIRLLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred HHHHHHHHHHHCCeEEeecC-CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 45678899999998876543 5689999987765 9999999999875
No 266
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.79 E-value=2.3e-17 Score=169.84 Aligned_cols=281 Identities=18% Similarity=0.151 Sum_probs=193.4
Q ss_pred ccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHH
Q 009181 164 DIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA 243 (541)
Q Consensus 164 ~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~ 243 (541)
...|....+|+ .++++-|.+. + +.+++|..|+..++.++.. +| ++|+++...|......+
T Consensus 52 ~gnPt~~~le~----~la~Le~g~~------a--~~~~SGmaAi~~~l~~ll~-----~G---d~iv~~~~~Y~~t~~~~ 111 (386)
T PF01053_consen 52 YGNPTVRALEQ----RLAALEGGED------A--LLFSSGMAAISAALLALLK-----PG---DHIVASDDLYGGTYRLL 111 (386)
T ss_dssp TC-HHHHHHHH----HHHHHHT-SE------E--EEESSHHHHHHHHHHHHS------TT---BEEEEESSSSHHHHHHH
T ss_pred cccccHHHHHH----HHHHhhcccc------e--eeccchHHHHHHHHHhhcc-----cC---CceEecCCccCcchhhh
Confidence 44566666666 7788887742 2 7889999999999998753 66 89999999888766555
Q ss_pred h----hcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcC-CEEEEeCCcccchhh
Q 009181 244 Q----YFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHG-TCLHVDLCLGGFVLP 318 (541)
Q Consensus 244 ~----~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~-i~lhvD~a~gg~~~~ 318 (541)
+ .+|+++..++.. |+++++++++++|++|++..|+||+..+.||++|+++|+++| ++++||..++.++.
T Consensus 112 ~~~l~~~gv~v~~~d~~-----d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~- 185 (386)
T PF01053_consen 112 EELLPRFGVEVTFVDPT-----DLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYN- 185 (386)
T ss_dssp HHCHHHTTSEEEEESTT-----SHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTT-
T ss_pred hhhhcccCcEEEEeCch-----hHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceee-
Confidence 4 459999999765 999999999999999999999999999999999999999998 99999999876533
Q ss_pred hhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC---ceEEEEec-ccccccccccccccCCCccCCCcccCCCCCchH
Q 009181 319 FAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG---TSVVLYRN-REIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLI 394 (541)
Q Consensus 319 f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g---~g~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~ 394 (541)
++....|+|++.-|..||. ++.+ .|+++.++ +++......... .. |.-.. .
T Consensus 186 -----------~~pL~~GaDivv~S~TKyl-~Ghsdv~~G~vv~~~~~~~~~~l~~~~~-~~----------G~~~~--p 240 (386)
T PF01053_consen 186 -----------QNPLELGADIVVHSATKYL-SGHSDVMGGAVVVNGSSELYDRLREFRR-LL----------GATLS--P 240 (386)
T ss_dssp -----------C-GGGGT-SEEEEETTTTT-TTSSSE-EEEEEESSHHHHHHHHHHHHH-HH----------T-B----H
T ss_pred -----------eccCcCCceEEEeeccccc-cCCcceeeEEEEECchhhhhhhhcchhh-hc----------Cccch--H
Confidence 3334568999999999995 4555 67666655 233221111110 01 11111 2
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEe-cC-----C-----------CeeEEEEecCCC--CHHH
Q 009181 395 AGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFII-GR-----P-----------DMTIVAFGSDVV--DIFE 455 (541)
Q Consensus 395 a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~-----~-----------~~~~v~f~~~~~--~~~~ 455 (541)
..+|..+ .|...+.-+.++..+++..+++.|++.|.++-+ .| | ..++++|.+++. ...+
T Consensus 241 ~da~ll~--rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~ 318 (386)
T PF01053_consen 241 FDAWLLL--RGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARR 318 (386)
T ss_dssp HHHHHHH--HHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHH
T ss_pred HHHHHHh--cCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHh
Confidence 3566655 467788899999999999999999999988743 33 1 146999998764 3445
Q ss_pred HHHHHHh--CCce---------ecc--------------CCC-CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 456 VNDIMSS--KGWH---------LNP--------------LQR-PNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 456 l~~~l~~--~G~~---------~~~--------------~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
+.+.|.- .|.. .+. .+. ++.+|+|++. ||.+.++++|+++++
T Consensus 319 f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl---Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 319 FLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL---EDPDDLIADLEQALE 386 (386)
T ss_dssp HHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S---S-HHHHHHHHHHHHH
T ss_pred HHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc---CCHHHHHHHHHHhcC
Confidence 5555542 1210 010 111 2679999998 788999999998875
No 267
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.79 E-value=1.2e-16 Score=167.41 Aligned_cols=288 Identities=17% Similarity=0.147 Sum_probs=181.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC--CCCeEEecCC-ccchHHHHHhhcCC--
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI--TRPEMIIPVS-AHSAYDKAAQYFNI-- 248 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi--~~~~vi~~~~-~h~s~~ka~~~~G~-- 248 (541)
.++.+.++++.+.+ . + .++++||+|+..|++++|.+....+|. .+++|+.... .|.....+....+-
T Consensus 85 ~~l~~~l~~~~~~~--~----~--~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~ 156 (396)
T PRK04073 85 GPWYEKVAKLTGKD--M----V--LPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEE 156 (396)
T ss_pred HHHHHHHHhcCCCC--e----E--EEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcc
Confidence 44556777776543 2 4 899999999999999998763322232 2456766654 45555455444331
Q ss_pred ----------eEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEeCCccc
Q 009181 249 ----------KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLGG 314 (541)
Q Consensus 249 ----------~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD~a~gg 314 (541)
.+..+|.+ |++++++++++++++|+++.++||+|.+.| +++|.++|++||+++++|++|.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~-----d~~~l~~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g 231 (396)
T PRK04073 157 YKRGFGPMLPGIKKIPYG-----DLEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTG 231 (396)
T ss_pred cccCCCCCCCCceEeCCC-----CHHHHHHhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhC
Confidence 12334433 789999999989999999999999999866 89999999999999999999987
Q ss_pred chhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCC-CCceEEEEecccccccccccccccCCCccCCCcccCCCCCch
Q 009181 315 FVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGL 393 (541)
Q Consensus 315 ~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p-~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~ 393 (541)
+... |... .++......|.+++ .|.+.++ ..+|+++.+ +++...... +. ...+..+ .
T Consensus 232 ~g~~-----g~~~-~~~~~~~~pdi~~~--sK~lg~gg~~ig~~~~~-~~i~~~~~~-------~~-~~~t~~~-----~ 289 (396)
T PRK04073 232 LGRT-----GKLF-ACDWDNVTPDMYIL--GKALGGGVFPISCVAAN-RDILGVFTP-------GS-HGSTFGG-----N 289 (396)
T ss_pred CCcC-----cHHH-HhhhcCCCCCEEEe--cccccCCCCcceEEEEc-HHHHhhhcC-------CC-CCCCCCC-----C
Confidence 6431 1000 01111123477765 4874433 457876664 333322100 00 0111112 1
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCC
Q 009181 394 IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI--PELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQ 471 (541)
Q Consensus 394 ~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~--~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~ 471 (541)
..++.+++..+..-.-.+..++..++.+++.+.|+++ +.+..+ ++...++.+.... +..++.+.|.++|+.+...+
T Consensus 290 ~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~i~~~-~~~g~~~~~~~~~-~~~~~~~~l~~~Gv~~~~~~ 367 (396)
T PRK04073 290 PLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEIDNPMIKEV-RGRGLFIGVELNE-PARPYCEALKEEGLLCKETH 367 (396)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcCCcccce-ecceEEEEEEecc-hHHHHHHHHHHCCeEEecCC
Confidence 2344444433321101245566677889999999876 222222 2345566666542 56788999999998875433
Q ss_pred CCCeEEEEecCCCH-HHHHHHHHHHHHHH
Q 009181 472 RPNSIHICVTLQHV-AVVDVFLRDLRESV 499 (541)
Q Consensus 472 ~~~~iRi~~~~~~~-e~id~~i~~L~~~~ 499 (541)
++.+|++++..++ +++++++++|++++
T Consensus 368 -~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 368 -ETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred -CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 4689999876655 99999999998875
No 268
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.79 E-value=4.4e-17 Score=160.23 Aligned_cols=304 Identities=15% Similarity=0.196 Sum_probs=205.6
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhh
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY 245 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~ 245 (541)
+.|...+.+++.+.+.+.-|.+.....+++ ++|.|+|.|+...+..+.+ +| +..++|.+.++.|+.-+++
T Consensus 120 y~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~--Vv~~G~T~ane~l~fcLad-----pg---dafLvPtPyY~gfdrdl~~ 189 (471)
T KOG0256|consen 120 YHGLPSFRQAVAEFMERARGNRVKFDPERV--VVTNGATSANETLMFCLAD-----PG---DAFLVPTPYYPGFDRDLRW 189 (471)
T ss_pred ccCchHHHHHHHHHHHHHhCCCCccCccce--EEecccchhhHHHHHHhcC-----CC---ceeeecCCCCCccccccee
Confidence 456666777777777777665422222236 8999999999999988876 78 8999999999999887775
Q ss_pred c-CCeEEEeeCCC--CCccCHHHHHHhhcc------CceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcc
Q 009181 246 F-NIKLWRVPVDK--EFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 246 ~-G~~v~~v~~~~--~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~g 313 (541)
. |++++.|.+.. ++++++++||++.++ +.+.|++++|+||.|++.+ +..+...|.++|+.|++|+.|.
T Consensus 190 rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya 269 (471)
T KOG0256|consen 190 RTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYA 269 (471)
T ss_pred ccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhc
Confidence 5 89999998864 789999999998864 5789999999999999977 5566677789999999999999
Q ss_pred cchhhhhhhcCCCCC------CCCcCCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCccc
Q 009181 314 GFVLPFAKKLGYPIP------PFDFSVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVA 386 (541)
Q Consensus 314 g~~~~f~~~~g~~~p------~~~~~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (541)
+.++- +.++ .+ ..++ ..+-.-+.++..|-+ ..+...|+++..|+...+....... ....
T Consensus 270 ~sVF~---~~~F-~Sv~ev~~~~~~-~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmss---------f~~v 335 (471)
T KOG0256|consen 270 GSVFD---KSEF-RSVLEVRKDPHL-DPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSS---------FGLV 335 (471)
T ss_pred ccccC---ccCc-eEHHHHhhcccc-CCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhh---------ccCC
Confidence 88762 2222 10 0111 222244566777872 3333488766666654432211000 0000
Q ss_pred CCCCCchHHHHHHHH-----HHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC----CC---HH
Q 009181 387 GSRPGGLIAGAWAAL-----MSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV----VD---IF 454 (541)
Q Consensus 387 gsr~~~~~a~~~~al-----~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~----~~---~~ 454 (541)
. ...++... ..+-.+-+++..+++....+|+.+.|+++ |+..+....+-++++.... .+ -.
T Consensus 336 S------s~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~AGlF~wvDlr~lL~s~tfe~El 408 (471)
T KOG0256|consen 336 S------SQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLKSNAGLFCWVDLRKLLTSLTFEGEL 408 (471)
T ss_pred c------HHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCceeecCCeeEEEEEhHHhcCcCChHHHH
Confidence 0 11233222 23345667788889999999999999998 8888855444444444432 11 12
Q ss_pred HHHHHHHhC-Cceecc-----CCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 455 EVNDIMSSK-GWHLNP-----LQRPNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 455 ~l~~~l~~~-G~~~~~-----~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
++-+++..+ +..++. +..||++|+|++.+..+.++-.+++|+..+.
T Consensus 409 ~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 409 ELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred HHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 344555555 655543 3568999999998776666668888888876
No 269
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.79 E-value=1.2e-16 Score=167.20 Aligned_cols=291 Identities=18% Similarity=0.132 Sum_probs=177.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC-CCCCeEEecCCccchHHHHHhhcCCeEE
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG-ITRPEMIIPVSAHSAYDKAAQYFNIKLW 251 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G-i~~~~vi~~~~~h~s~~ka~~~~G~~v~ 251 (541)
..++.+.++++.+.+ . + ++++||++|+..|++++|.+... +| ..+++|++.+..++.....+...+....
T Consensus 75 ~~~la~~l~~~~~~~--~----v--~~~~sGseA~~~al~~ar~~~~~-~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~ 145 (389)
T PRK01278 75 QERLAERLVENSFAD--K----V--FFTNSGAEAVECAIKTARRYHYG-KGHPERYRIITFEGAFHGRTLATIAAGGQEK 145 (389)
T ss_pred HHHHHHHHHhhCCCC--E----E--EEcCCcHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCcCCCcHHHHhccCChh
Confidence 345666777776432 2 5 89999999999999999875332 34 1245888888877765544444432211
Q ss_pred Ee----eCCCCCc----cCHHHHHHhhccCceEEEeecCCCCCccc----cCHHHHHHHHHHcCCEEEEeCCcccchhhh
Q 009181 252 RV----PVDKEFR----ADVKAIKKYINRNTVLIVGSAPGFPHGII----DPIQELGELALSHGTCLHVDLCLGGFVLPF 319 (541)
Q Consensus 252 ~v----~~~~~~~----~d~~~Le~~i~~~t~~vv~~~~~~~~G~i----d~i~~I~~la~~~~i~lhvD~a~gg~~~~f 319 (541)
.. |..+++. .|++++++++++++++|+++.+++++|.. +.+++|.++|++||+++++|++|.|+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~-- 223 (389)
T PRK01278 146 YLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGR-- 223 (389)
T ss_pred hcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc--
Confidence 11 2112222 58999999999899999999988888843 3589999999999999999999987633
Q ss_pred hhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHH
Q 009181 320 AKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGA 397 (541)
Q Consensus 320 ~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~ 397 (541)
.|. .+.+...+ .|.+++ .|.+.++...|+++.+++ +.+.... ...++..+....++
T Consensus 224 ---~g~---~~~~~~~~~~pdi~t~--sK~l~~G~~ig~~~~~~~-~~~~~~~-------------~~~~~t~~~~~~~~ 281 (389)
T PRK01278 224 ---TGK---LFAHEWAGVTPDIMAV--AKGIGGGFPLGACLATEE-AAKGMTP-------------GTHGSTYGGNPLAM 281 (389)
T ss_pred ---CCc---ceeecccCCCCCEEEE--ehhccCCcceEEEEEcHH-HHhccCC-------------CCCCCCCCccHHHH
Confidence 111 01111112 355544 588554456888777654 2221100 00111111222344
Q ss_pred HHH---HHHHhHHHHHHHHHHHHHHHHHHHHHhhc----CCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccC
Q 009181 398 WAA---LMSLGQEGYLENTKAIMEVSESIQKGIKE----IPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPL 470 (541)
Q Consensus 398 ~~a---l~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~ 470 (541)
.++ ++.+..++ ..++..++.+++++.|++ .+++.....+...++.+.... +..++.+.|.++|+.+...
T Consensus 282 aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~-~~~~~~~~l~~~GV~~~p~ 357 (389)
T PRK01278 282 AVGNAVLDVILAPG---FLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV-PNRDLVQALRDEGLLTVGA 357 (389)
T ss_pred HHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEec-CHHHHHHHHHHCCeEEeec
Confidence 444 54443332 334455555555555544 332211112334455555432 5778999999999876543
Q ss_pred CCCCeEEEEecCC-CHHHHHHHHHHHHHHHHH
Q 009181 471 QRPNSIHICVTLQ-HVAVVDVFLRDLRESVET 501 (541)
Q Consensus 471 ~~~~~iRi~~~~~-~~e~id~~i~~L~~~~~~ 501 (541)
+ ++.+|++++.. +.+++++++++|++++++
T Consensus 358 ~-~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 358 G-DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred C-CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 3 47899998754 449999999999998765
No 270
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.78 E-value=2.4e-16 Score=165.53 Aligned_cols=288 Identities=17% Similarity=0.189 Sum_probs=182.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc------hHHHHHhhcC
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS------AYDKAAQYFN 247 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~------s~~ka~~~~G 247 (541)
.++++.+++++|++.. +++++|+.|+.+++.++ .+| ++|+++...|. .+...++..|
T Consensus 125 ~~le~~lA~l~gae~a--------lvv~sg~aAi~l~l~~l------~~G---deVIvs~~e~v~~ggs~~i~~~~~~~G 187 (454)
T TIGR00474 125 SHVEGLLCELTGAEDA--------LVVNNNAAAVLLALNTL------AKG---KEVIVSRGELVEIGGSFRIPDVMEQSG 187 (454)
T ss_pred HHHHHHHHHHhCCCcE--------EEECCHHHHHHHHHHHh------CCc---CEEEECCChhhhhcchhhHHHHHHHcC
Confidence 4577899999999753 56778888988888553 256 89999988764 2345667789
Q ss_pred CeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCC--c--cccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhc
Q 009181 248 IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPH--G--IIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (541)
Q Consensus 248 ~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~--G--~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~ 323 (541)
++++.++++ ...|+++++++|+++|++|++++++|++ | .+.|+++|+++||+||++++||.+.|.+. +. ...
T Consensus 188 ~~~~~v~~~--~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~-~~-~~~ 263 (454)
T TIGR00474 188 AKLVEVGTT--NRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLV-DL-SRY 263 (454)
T ss_pred CEEEEeCCC--CCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccc-cc-hhc
Confidence 999998764 3468999999999999999999999884 6 57899999999999999999998755321 10 001
Q ss_pred CCC-CC-CCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCC-chHHHHHHH
Q 009181 324 GYP-IP-PFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG-GLIAGAWAA 400 (541)
Q Consensus 324 g~~-~p-~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~-~~~a~~~~a 400 (541)
|.. .| ..+....|+|++++++|||++||. .|+++.+++ ...... .. +....-|.+ ..++++.++
T Consensus 264 gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~~-~i~~l~-~~----------~l~r~lr~~k~~la~l~~~ 330 (454)
T TIGR00474 264 GLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGIIVGKKE-LIERLK-KN----------PLTRALRVDKLTLAALEAT 330 (454)
T ss_pred cCCCCcccccHhHcCCCEEEecCccccCCCe-EEEEEECHH-HHHhhh-hc----------hhHHHHhhChHHHHHHHHH
Confidence 110 11 124556899999999999977774 776666543 332110 00 000000111 112222333
Q ss_pred HHHH-----------hHHHHHHHHHHHHHHHHHHHHHhhcC--CCe--EEecCC---------C----eeEEEEecCCCC
Q 009181 401 LMSL-----------GQEGYLENTKAIMEVSESIQKGIKEI--PEL--FIIGRP---------D----MTIVAFGSDVVD 452 (541)
Q Consensus 401 l~~l-----------g~~g~~~~~~~~~~~a~~l~~~L~~~--~~~--~v~~~~---------~----~~~v~f~~~~~~ 452 (541)
+..+ |..-+....++..+++..+.+.|++. +++ ++...+ . ...+.+...+.+
T Consensus 331 l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~ 410 (454)
T TIGR00474 331 LRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLS 410 (454)
T ss_pred HHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCC
Confidence 3222 12223334456667788888888764 443 444221 1 234455544557
Q ss_pred HHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHH
Q 009181 453 IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDL 495 (541)
Q Consensus 453 ~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L 495 (541)
..++.++|++....+-..-..+.+.+-+-....+|.+.+++.|
T Consensus 411 ~~~l~~~lr~~~~~ii~r~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 411 AEKLEARLRELPPPIIGRIEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred HHHHHHHHhcCCCCEEEEEECCEEEEEeCcCCHHHHHHHHHHh
Confidence 8899998887653332222235566666555558888887765
No 271
>PRK08354 putative aminotransferase; Provisional
Probab=99.78 E-value=1.6e-16 Score=160.90 Aligned_cols=255 Identities=18% Similarity=0.213 Sum_probs=165.4
Q ss_pred HHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC
Q 009181 176 VIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (541)
Q Consensus 176 v~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~ 255 (541)
+++++++.+|. + + ++|+|+++++..++.++. +| ++|+++.++|+.+..+++.+|++++.++
T Consensus 45 l~~~ia~~~~~---~----I--~vt~G~~~al~~~~~~~~------~g---d~vlv~~P~y~~~~~~~~~~g~~~~~~~- 105 (311)
T PRK08354 45 LEEEFSKLFGE---P----I--VITAGITEALYLIGILAL------RD---RKVIIPRHTYGEYERVARFFAARIIKGP- 105 (311)
T ss_pred HHHHHHHHHCC---C----E--EECCCHHHHHHHHHHhhC------CC---CeEEEeCCCcHHHHHHHHHcCCEEeecC-
Confidence 55688888873 3 6 899999999987764331 45 8999999999999999999999997764
Q ss_pred CCCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCc
Q 009181 256 DKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (541)
Q Consensus 256 ~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~ 332 (541)
+|++.++++++ ++.++++++|+||||.+.+ +++|.++|+++|+++++|++|+.|... . . . ..
T Consensus 106 -----~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~---~--~-~--~~- 170 (311)
T PRK08354 106 -----NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKK---P--E-S--PE- 170 (311)
T ss_pred -----CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccc---c--c-c--cC-
Confidence 57899998887 5678899999999999977 567788889999999999999877541 1 1 1 11
Q ss_pred CCCCceEEEeCCCCCCC-CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHH-
Q 009181 333 SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYL- 410 (541)
Q Consensus 333 ~~~gvdsis~~~hK~~~-~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~- 410 (541)
..-.++..++.|... .+..+|+++.-.+.+.. ....|..+ . ..++++..+...+++
T Consensus 171 --~~~vi~~~S~SK~~~l~GlRiG~~v~~~~~l~~----~~~~~~~~---------------~-~~~~~~~~~~~~~~~~ 228 (311)
T PRK08354 171 --GENIIKLRTFTKSYGLPGIRVGYVKGFEEAFRS----VRMPWSIG---------------S-TGYAFLEFLIEDDFEH 228 (311)
T ss_pred --CCcEEEEeccHhhcCCccceeeeeeehHHHHHH----cCCCccCC---------------H-HHHHHHHHHHHhHHHH
Confidence 223456678889843 45568987761111111 11111111 1 112222222222222
Q ss_pred --HHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceecc---CCCCCeEEEEecCCCH
Q 009181 411 --ENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP---LQRPNSIHICVTLQHV 485 (541)
Q Consensus 411 --~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~---~~~~~~iRi~~~~~~~ 485 (541)
+..+...+.++.+.+.+ ..++..+++.+... +..++.+.|.++|+.+.. ++.++++||+++. .
T Consensus 229 ~~~~~~~~~~~~~~l~~~l--------~~~~~~~~~~~~~~--~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~~--~ 296 (311)
T PRK08354 229 LRKTMPLIWREKERFEKAL--------YVKSDANFFIKDVG--DAEKFVEFLKRNGILVRDCTSFGLPGYIRFSVRD--R 296 (311)
T ss_pred HHHHHHHHHHHHHHHHHhc--------CCCCCCcEEEEECC--CHHHHHHHHHHCCeEEEecccCCCCCeEEEEeCC--H
Confidence 22222222222222221 12456666666543 567899999999976543 3446899999984 4
Q ss_pred HHHHHHHHHHHHH
Q 009181 486 AVVDVFLRDLRES 498 (541)
Q Consensus 486 e~id~~i~~L~~~ 498 (541)
++.+++++.|+++
T Consensus 297 ~~~~~l~~al~~~ 309 (311)
T PRK08354 297 EENEKLIRALREW 309 (311)
T ss_pred HHHHHHHHHHHHh
Confidence 6678888887764
No 272
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.78 E-value=3.7e-17 Score=168.73 Aligned_cols=278 Identities=16% Similarity=0.147 Sum_probs=187.8
Q ss_pred ccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc----hH
Q 009181 164 DIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS----AY 239 (541)
Q Consensus 164 ~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~----s~ 239 (541)
...|.+.++|+ .++++.|.+. . +.+++|+.|+.+++.++. ++| |+|+++...|. .+
T Consensus 61 ~~~P~~~~lE~----~la~leg~~~------a--v~~sSG~aAi~~al~all-----~~G---D~Vl~~~~~yg~t~~~~ 120 (384)
T PRK06434 61 WGNPTVQAFEE----KYAVLENAEH------A--LSFSSGMGAITSAILSLI-----KKG---KRILSISDLYGQTFYFF 120 (384)
T ss_pred CCChhHHHHHH----HHHHHhCCCc------E--EEeCCHHHHHHHHHHHHh-----CCC---CEEEEecCccchHHHHH
Confidence 34577777777 7888888753 2 788889999999998864 267 99999876433 34
Q ss_pred HHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhh
Q 009181 240 DKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLP 318 (541)
Q Consensus 240 ~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~ 318 (541)
...+..+|++++.+++++...++ +++ ++++|++..++||++.+.|+++|+++|++++ ++||++++....
T Consensus 121 ~~~~~~~Gi~v~fvd~~~~~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~- 190 (384)
T PRK06434 121 NKVLKTLGIHVDYIDTDRLNSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYN- 190 (384)
T ss_pred HHHHHhcCcEEEEECCCChhhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCccc-
Confidence 46778889999999986422222 333 6899999999999999999999999999998 567999864432
Q ss_pred hhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHH
Q 009181 319 FAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAG 396 (541)
Q Consensus 319 f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~ 396 (541)
..++ ..|+|+++.|.||++.++.+ .|+++.+++++.......... .|.... ...
T Consensus 191 --------~~pl---~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~-----------~G~~~~--~~~ 246 (384)
T PRK06434 191 --------QNPL---DLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKT-----------LGSNPD--PIQ 246 (384)
T ss_pred --------CCch---hcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHh-----------cCCCCC--HHH
Confidence 1122 35789999999999766665 566556555433221111000 111111 124
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------CeeEEEEecCCC-CHHHHHHHHHh--
Q 009181 397 AWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------DMTIVAFGSDVV-DIFEVNDIMSS-- 462 (541)
Q Consensus 397 ~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------~~~~v~f~~~~~-~~~~l~~~l~~-- 462 (541)
+|..+ .|.+.+..++++..++++.+.+.|++.|.++-+.-| .+++++|.+++. ...++.+.|.-
T Consensus 247 A~l~~--~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~l~~ 324 (384)
T PRK06434 247 AYLAL--RGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNLEIPM 324 (384)
T ss_pred HHHHH--hCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhCCcce
Confidence 55544 566788999999999999999999999887543332 257999998641 22333333321
Q ss_pred CCceec-----------------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 463 KGWHLN-----------------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 463 ~G~~~~-----------------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
.+..+. ..+. ++.+|+|++. ||++.++++|+++++
T Consensus 325 ~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl---Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 325 VAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGI---EDIDDLIKDIENALS 383 (384)
T ss_pred EccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHhc
Confidence 121000 0111 2579999998 778888899988874
No 273
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.78 E-value=8.9e-17 Score=167.46 Aligned_cols=294 Identities=16% Similarity=0.118 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeE
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKL 250 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v 250 (541)
....++.+.+++++|.+ . + ++++||++|+..++++++..... +|..+++|+++.+.+..+...+...+...
T Consensus 69 ~~~~~l~~~la~~~g~~--~----~--~~~~sg~~a~~~a~~~~~~~~~~-~~~~~~~vi~~~~~yh~~~~~~~~~~~~~ 139 (379)
T TIGR00707 69 EPQEELAEKLVEHSGAD--R----V--FFCNSGAEANEAALKLARKYTGD-KGKEKKKIIAFENSFHGRTMGALSATGQP 139 (379)
T ss_pred HHHHHHHHHHHhhCCCC--E----E--EEeCCcHHHHHHHHHHHHHHhhc-cCCCCCeEEEECCCcCCccHHHHHhcCCh
Confidence 44556777999999875 3 4 89999999999999988643221 11112789888877665554444444322
Q ss_pred E----EeeCCCCCcc----CHHHHHHhhccCceEEEeecCCCCCcccc----CHHHHHHHHHHcCCEEEEeCCcccchhh
Q 009181 251 W----RVPVDKEFRA----DVKAIKKYINRNTVLIVGSAPGFPHGIID----PIQELGELALSHGTCLHVDLCLGGFVLP 318 (541)
Q Consensus 251 ~----~v~~~~~~~~----d~~~Le~~i~~~t~~vv~~~~~~~~G~id----~i~~I~~la~~~~i~lhvD~a~gg~~~~ 318 (541)
. ..++..+... |++++++++++++.+|+++.+++++|... ++++|.++|++||+++++|++|.++...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~ 219 (379)
T TIGR00707 140 KYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRT 219 (379)
T ss_pred hhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc
Confidence 1 1233222222 89999999998899999988877777642 3899999999999999999999765321
Q ss_pred hhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHH
Q 009181 319 FAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAW 398 (541)
Q Consensus 319 f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~ 398 (541)
.. + . .+.......|.++ ++|.+.++.++|+++.+ +++........ .+ ....+ +....+++.
T Consensus 220 --g~-~--~-~~~~~~~~~d~~t--~sK~~~~G~riG~~~~~-~~~~~~~~~~~---~~-----~~~~~--~~~~~~aa~ 280 (379)
T TIGR00707 220 --GK-F--F-AYEHYGIEPDIIT--LAKGLGGGVPIGATLAK-EEVAEAFTPGD---HG-----STFGG--NPLACAAAL 280 (379)
T ss_pred --ch-h--h-hHHhcCCCCCEEE--EcccccCCcccEEEEEc-HHHHhhhcCCC---CC-----CCCCC--CHHHHHHHH
Confidence 00 0 0 0111111225554 46986666678986664 44433221100 00 00111 111234555
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEE--e-cCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCe
Q 009181 399 AALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFI--I-GRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNS 475 (541)
Q Consensus 399 ~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v--~-~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~ 475 (541)
++++.+.. .+..++..++++++++.|+++ +... . .++...++++...+ +..++.+.|.++|+.+...+ +++
T Consensus 281 aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~l~~~Gv~v~~~~-~~~ 354 (379)
T TIGR00707 281 AVLEVIEK---ERLLENVKEKGDYFKERLEEL-GKNYPNKEVRGKGLMLGIELEA-PCKDIVKKALEKGLLVNCAG-PKV 354 (379)
T ss_pred HHHHHHHh---hhHHHHHHHHHHHHHHHHHHH-HhhCCCCccccCceEEEEEecC-cHHHHHHHHHHCCcEEeeCC-CCE
Confidence 55555432 245566777777888777664 2111 1 11345567776543 46789999999998876543 478
Q ss_pred EEEEecCCC-HHHHHHHHHHHHHH
Q 009181 476 IHICVTLQH-VAVVDVFLRDLRES 498 (541)
Q Consensus 476 iRi~~~~~~-~e~id~~i~~L~~~ 498 (541)
+|++++..+ .+++++++++|+++
T Consensus 355 lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 355 LRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHh
Confidence 999987644 49999999999876
No 274
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.78 E-value=2.3e-16 Score=165.10 Aligned_cols=292 Identities=17% Similarity=0.108 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecC-CccchHHHHHhhcCC---
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPV-SAHSAYDKAAQYFNI--- 248 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~-~~h~s~~ka~~~~G~--- 248 (541)
..++.+.++++++.+ . + .++++|++|+..|++++|.+..++.|..+++|+..+ ..|.+...+....+.
T Consensus 79 ~~~la~~L~~~~~~~--~----~--~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~ 150 (397)
T TIGR03246 79 VLRLAKKLVDATFAD--K----V--FFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKY 150 (397)
T ss_pred HHHHHHHHHhhCCCC--E----E--EEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccc
Confidence 445666788877543 2 4 899999999999999998765432222345666555 456665544444332
Q ss_pred ---------eEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCcccc----CHHHHHHHHHHcCCEEEEeCCcccc
Q 009181 249 ---------KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIID----PIQELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 249 ---------~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id----~i~~I~~la~~~~i~lhvD~a~gg~ 315 (541)
.+..+|.+ |++++++++++++.+|+++..+++.|.+. .+++|.++|++||+++++|+++.|+
T Consensus 151 ~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~ 225 (397)
T TIGR03246 151 SQGFAPLPGGIKHAPYN-----DLAAAKALISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGV 225 (397)
T ss_pred ccCCCCCCCceEEeCCC-----CHHHHHHHhccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC
Confidence 23344443 89999999988899999998877778653 3999999999999999999998666
Q ss_pred hhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCch
Q 009181 316 VLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGL 393 (541)
Q Consensus 316 ~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~ 393 (541)
.. .|. .+.....| +|++++ .|.+.++..+|+++.+++ +..... .... ..+..+... .
T Consensus 226 Gr-----~G~---~~a~~~~gv~pDi~t~--~K~lggG~pigav~~~~~-i~~~~~---~~~~-----~~t~~~~p~--~ 284 (397)
T TIGR03246 226 GR-----TGE---LYAYMHYGVTPDILTS--AKALGGGFPIGAMLTTTE-IAAHLK---VGTH-----GTTYGGNPL--A 284 (397)
T ss_pred Cc-----ccc---chhhhhcCCCCCEEEe--ehhhhCCcceeEEEEcHH-HHHhcc---CCCc-----CCCCCCCHH--H
Confidence 32 111 01111122 477765 477545566787776543 322110 0000 011111111 1
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCC-CeEEec--CCCeeEEEEecCC---CCHHHHHHHHHhCCcee
Q 009181 394 IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIP-ELFIIG--RPDMTIVAFGSDV---VDIFEVNDIMSSKGWHL 467 (541)
Q Consensus 394 ~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~--~~~~~~v~f~~~~---~~~~~l~~~l~~~G~~~ 467 (541)
.+++.++++.+. -.+..++..++.+++.+.|+++. .+.++. .....++.+.+.+ ....++.+.|.++|+.+
T Consensus 285 ~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~ 361 (397)
T TIGR03246 285 CAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIA 361 (397)
T ss_pred HHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEE
Confidence 334445555443 24577888888999999888752 122222 2233445554432 24568889999999887
Q ss_pred ccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 468 NPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 468 ~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
...+ ++.+|++++..++ +++++++++|+++++++
T Consensus 362 ~~~g-~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 362 LIAG-PNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred eecC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 6543 4689998877666 99999999999988653
No 275
>PRK07049 methionine gamma-lyase; Validated
Probab=99.78 E-value=1.6e-16 Score=167.07 Aligned_cols=279 Identities=14% Similarity=0.150 Sum_probs=190.8
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHH---
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA--- 243 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~--- 243 (541)
|....+|+ .++++.|.+. + ++++||++|+..++.++.+ +| ++|+++.+.|..+...+
T Consensus 83 Pt~~~Le~----~lA~leg~~~------~--iv~~sG~~Ai~~~l~al~~-----~G---d~Vv~~~p~Y~~~~~~~~~~ 142 (427)
T PRK07049 83 PNSEIVED----RLAVYEGAES------A--ALFSSGMSAIATTLLAFVR-----PG---DVILHSQPLYGGTETLLAKT 142 (427)
T ss_pred cCHHHHHH----HHHHHhCCCc------E--EEEccHHHHHHHHHHHHhC-----CC---CEEEEcCCCcccHHHHHHHH
Confidence 44455555 8888888652 3 7889999999999988764 67 89999999999886653
Q ss_pred -hhcCCeEEEeeCCCCCccCHHHHHHhhc-----cCceEEEeecCCCCCccccCHHHHHHHHHH------cCCEEEEeCC
Q 009181 244 -QYFNIKLWRVPVDKEFRADVKAIKKYIN-----RNTVLIVGSAPGFPHGIIDPIQELGELALS------HGTCLHVDLC 311 (541)
Q Consensus 244 -~~~G~~v~~v~~~~~~~~d~~~Le~~i~-----~~t~~vv~~~~~~~~G~id~i~~I~~la~~------~~i~lhvD~a 311 (541)
+.+|++++.++.. .|.+++++++. ++|++|++++|+||+|.+.|+++|.+++++ +++++++|++
T Consensus 143 l~~~Gi~~v~~~~~----~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDet 218 (427)
T PRK07049 143 FRNFGVGAVGFADG----LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNT 218 (427)
T ss_pred HHhcCcEEEEEeCC----CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECC
Confidence 5679887777621 46778877774 579999999999999999999999999988 8999999999
Q ss_pred cccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCC
Q 009181 312 LGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSR 389 (541)
Q Consensus 312 ~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr 389 (541)
|.++... .++ ..|+|++..++.|+..+..| +|+++ .++++.+........| + .-
T Consensus 219 y~~~~~~---------~pl---~~g~divv~S~SK~~gG~~glr~G~vv-~~~~l~~~l~~~~~~~-g----------~~ 274 (427)
T PRK07049 219 LLGPVFQ---------KPL---EHGADLSVYSLTKYVGGHSDLVAGAVL-GRKALIRQVRALRSAI-G----------TQ 274 (427)
T ss_pred ccccccC---------Ccc---ccCCCEEEEcCceeecCCCCcEEEEEE-CCHHHHHHHHHHHHhc-C----------CC
Confidence 8654321 122 33678999999999553343 67654 4454433222111111 1 11
Q ss_pred CCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-------------------CeeEEEEecCC
Q 009181 390 PGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-------------------DMTIVAFGSDV 450 (541)
Q Consensus 390 ~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-------------------~~~~v~f~~~~ 450 (541)
.....+|++++.+ +.+..+.++..++++.+.+.|++.|+++-+.-| ..++++|.+++
T Consensus 275 --ls~~~a~l~~r~L--~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~ 350 (427)
T PRK07049 275 --LDPHSCWMLGRSL--ETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKG 350 (427)
T ss_pred --CCHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcC
Confidence 1134778877655 456777888899999999999999887543222 14689998864
Q ss_pred C--CHHHHHHHHHh--CCcee-------------c----------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 451 V--DIFEVNDIMSS--KGWHL-------------N----------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 451 ~--~~~~l~~~l~~--~G~~~-------------~----------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
. ...++.+.|.- .+..+ . ..+. ++.+|+|++. ||+|.++++|+++++
T Consensus 351 ~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~ 425 (427)
T PRK07049 351 GQAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGI---EHPDDLIADLAQALD 425 (427)
T ss_pred CHHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence 2 12334333321 11100 0 0111 2579999998 778889999998875
No 276
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.77 E-value=6.8e-18 Score=154.40 Aligned_cols=163 Identities=24% Similarity=0.280 Sum_probs=132.1
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH-HHHhhcCCeEEEe
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD-KAAQYFNIKLWRV 253 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~-ka~~~~G~~v~~v 253 (541)
+++++++++++.+..+ + ++++|||+|+.+++++++. +| ++|+++.+.|++.. ..+...|++++.+
T Consensus 4 ~~~~~l~~~~~~~~~~----~--~~~~~~t~a~~~~~~~~~~-----~~---~~v~~~~~~~~~~~~~~~~~~g~~~~~v 69 (170)
T cd01494 4 ELEEKLARLLQPGNDK----A--VFVPSGTGANEAALLALLG-----PG---DEVIVDANGHGSRYWVAAELAGAKPVPV 69 (170)
T ss_pred HHHHHHHHHcCCCCCc----E--EEeCCcHHHHHHHHHHhCC-----CC---CEEEEeecccceehhhHHHhcCCEEEEe
Confidence 5778999999744443 4 8899999999999999863 34 78999999999988 8889999999999
Q ss_pred eCCCCCccCH--HHHHHh-hccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCC
Q 009181 254 PVDKEFRADV--KAIKKY-INRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (541)
Q Consensus 254 ~~~~~~~~d~--~~Le~~-i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~ 330 (541)
+.++++..+. +++++. ..+++.+++++++++++|...|+++|.++|+++|+++|+|++++++..+. +..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~--------~~~ 141 (170)
T cd01494 70 PVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPA--------PGV 141 (170)
T ss_pred ccCCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccc--------ccc
Confidence 9876543333 355444 35689999999999999999999999999999999999999998876631 112
Q ss_pred CcCCCCceEEEeCCCCCCCCCCCceEEEEe
Q 009181 331 DFSVQGVTSISVDVHKYGLAPKGTSVVLYR 360 (541)
Q Consensus 331 ~~~~~gvdsis~~~hK~~~~p~g~g~ll~~ 360 (541)
+....++|+++.++||++ ++.++|++++|
T Consensus 142 ~~~~~~~d~~~~s~~K~~-~~~~~G~l~~~ 170 (170)
T cd01494 142 LIPEGGADVVTFSLHKNL-GGEGGGVVIVK 170 (170)
T ss_pred ccccccCCEEEEEccccc-CCCceEEEEeC
Confidence 344567899999999995 44899988764
No 277
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.77 E-value=2.2e-16 Score=164.10 Aligned_cols=263 Identities=15% Similarity=0.082 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEE
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~ 252 (541)
.+++.+++++.+|.+ . + ++|+|||+|+.+++.++. -++| ++|+++..+|+++..++...|++++.
T Consensus 33 ~~~~e~~la~~~g~~--~----~--v~~~sgt~al~~~l~~~~----~~~G---d~Viv~~~t~~~~~~~~~~~G~~~v~ 97 (375)
T PRK11706 33 TRRCQQWLEQRFGSA--K----V--LLTPSCTAALEMAALLLD----IQPG---DEVIMPSYTFVSTANAFVLRGAKIVF 97 (375)
T ss_pred HHHHHHHHHHHhCCC--e----E--EEECCHHHHHHHHHHHhC----CCCC---CEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 344556888888875 2 4 899999999988877652 1256 89999999999999999999999999
Q ss_pred eeCCC-CCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 253 VPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 253 v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
+++++ ++.+|+++++++++++|++|++++ ++|...|+++|.++|++||+++++|+|++.+.. + .|. +.
T Consensus 98 ~d~d~~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~-~---~~~---~~- 166 (375)
T PRK11706 98 VDIRPDTMNIDETLIEAAITPKTRAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMST-Y---KGR---AL- 166 (375)
T ss_pred EecCCCcCCcCHHHHHHhcCCCCeEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECccccccc-c---CCe---ee-
Confidence 99986 468999999999999999988765 589999999999999999999999999875431 0 010 00
Q ss_pred cCCCCceEEEeCCC--CCCCCCCCceEEEEeccccccccccccc------ccCCCccC--CCcccCCCCCchHHHHHHHH
Q 009181 332 FSVQGVTSISVDVH--KYGLAPKGTSVVLYRNREIRKHQFVAVT------EWSGGLYV--SPTVAGSRPGGLIAGAWAAL 401 (541)
Q Consensus 332 ~~~~gvdsis~~~h--K~~~~p~g~g~ll~~~~~~~~~~~~~~~------~~~~~~~~--~~~~~gsr~~~~~a~~~~al 401 (541)
. ...|.-++|+| |.+ ++...|++++.++++......... .+..+... .....|...... ..-+++
T Consensus 167 -g-~~~~~~~~Sf~~~K~l-~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~aa~ 241 (375)
T PRK11706 167 -G-TIGHIGCFSFHETKNY-TAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPS--ELQAAY 241 (375)
T ss_pred -e-cCcCEEEEeCCCCccc-cccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcC--HHHHHH
Confidence 0 01244455555 984 443345556655554432111100 00000000 000112222111 222233
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhhcCCC---eEEecCC-C----eeEEEEecCC-CCHHHHHHHHHhCCce
Q 009181 402 MSLGQEGYLENTKAIMEVSESIQKGIKEIPE---LFIIGRP-D----MTIVAFGSDV-VDIFEVNDIMSSKGWH 466 (541)
Q Consensus 402 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~---~~v~~~~-~----~~~v~f~~~~-~~~~~l~~~l~~~G~~ 466 (541)
.....+.+++..++..++++++.+.|.++++ +++...+ . ...+.+...+ .+..++.+.|.++|+.
T Consensus 242 ~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~ 315 (375)
T PRK11706 242 LWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDLEDRSALINFLKEAGIM 315 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCcCCHHHHHHHHHHCCCC
Confidence 2223355788889999999999999988762 4432212 1 2244444443 4688999999999964
No 278
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.77 E-value=3.2e-16 Score=164.53 Aligned_cols=297 Identities=20% Similarity=0.159 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC--CCCeEEecCCc-cchHHHHHhhcCC
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI--TRPEMIIPVSA-HSAYDKAAQYFNI 248 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi--~~~~vi~~~~~-h~s~~ka~~~~G~ 248 (541)
...++.+.++++++.+ . + .++++||+|+..|++.++.+...++|+ .+..|++.+.+ |......+...+-
T Consensus 74 ~~~~~~~~l~~~~~~~--~----~--~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~ 145 (400)
T PTZ00125 74 VLGLAEKYITDLFGYD--K----V--LPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTD 145 (400)
T ss_pred HHHHHHHHHHhCCCCC--E----E--EEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCC
Confidence 4455666788877764 2 3 889999999999999998654444443 23556665554 5554444443332
Q ss_pred e------------EEEeeCCCCCccCHHHHHHhhc-cCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEeCC
Q 009181 249 K------------LWRVPVDKEFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 249 ~------------v~~v~~~~~~~~d~~~Le~~i~-~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD~a 311 (541)
. +..++. .|+++++++++ +++.+|+++.+++++|.+.| +++|.++|++||+++++|++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev 220 (400)
T PTZ00125 146 PKCYNNFGPFVPGFELVDY-----NDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEI 220 (400)
T ss_pred cchhccCCCCCCCceEeCC-----CCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 1 122222 38999999996 67899999999999999887 99999999999999999999
Q ss_pred cccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCC-CceEEEEecccccccccccccccCCCccCCCcccCCCC
Q 009181 312 LGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 312 ~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~ 390 (541)
|.++.. .|... ..+......|.++++ |.+.++. ++|+++.+++ +....... ..+ .+..+..
T Consensus 221 ~~g~g~-----~G~~~-~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~~-~~~~~~~~---~~~-----~t~~~~~- 282 (400)
T PTZ00125 221 QTGLGR-----TGKLL-AHDHEGVKPDIVLLG--KALSGGLYPISAVLANDD-VMLVIKPG---EHG-----STYGGNP- 282 (400)
T ss_pred ccCCCc-----cchhh-HHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcHH-HHhhccCC---CCC-----CCCCcCH-
Confidence 976532 11000 011111123677664 9866554 6888776553 32211100 000 0111111
Q ss_pred CchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC----CCeEEecCCCeeEEEEecCC---CCHHHHHHHHHhC
Q 009181 391 GGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI----PELFIIGRPDMTIVAFGSDV---VDIFEVNDIMSSK 463 (541)
Q Consensus 391 ~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~f~~~~---~~~~~l~~~l~~~ 463 (541)
...++..++++.+..+++ .++..++.+++++.|+++ +.+..+ .+...++++.++. .+..++.+.|.++
T Consensus 283 -~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~~~~~~~l~~~ 357 (400)
T PTZ00125 283 -LACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEI-RGKGLLNAIVFDHSDGVNAWDLCLKLKEN 357 (400)
T ss_pred -HHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEE-ecccEEEEEEEccCcchHHHHHHHHHHHC
Confidence 112233444544443333 344455666677766553 322222 3345555665542 2466788999999
Q ss_pred CceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHcC
Q 009181 464 GWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQN 505 (541)
Q Consensus 464 G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~~ 505 (541)
|+.+... .++.+|++++...+ +++++++++|+++++++..+
T Consensus 358 Gv~v~~~-~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~~~ 399 (400)
T PTZ00125 358 GLLAKPT-HDNIIRFAPPLVITKEQLDQALEIIKKVLKSFDSN 399 (400)
T ss_pred CeEEeec-CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 9877543 34689999875444 99999999999999887543
No 279
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.77 E-value=3.2e-16 Score=165.13 Aligned_cols=299 Identities=14% Similarity=0.080 Sum_probs=197.0
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHH----HhhcCCCCCeEEecCCccchHHHHHhhcCCeE
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYM----RNKRGITRPEMIIPVSAHSAYDKAAQYFNIKL 250 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~----~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v 250 (541)
++++.+++++|.+. + ++|++||+|+..++.++.... .-++| ++|+++..+|+++..++...|+++
T Consensus 67 ~fe~~lA~~~g~~~------~--v~~~sGt~al~~aL~al~~~~~~~~~~~pG---d~VIv~~~t~~a~~~~v~~~G~~p 135 (438)
T PRK15407 67 AFEKKLAEFLGVRY------A--LLVNSGSSANLLAFSALTSPKLGDRALKPG---DEVITVAAGFPTTVNPIIQNGLVP 135 (438)
T ss_pred HHHHHHHHHhCCCe------E--EEECCHHHHHHHHHHHHhhccccccCCCCC---CEEEECCCCcHHHHHHHHHcCCEE
Confidence 34558888888752 3 789999999999998874211 11245 899999999999999999999999
Q ss_pred EEeeCCC-CCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCC
Q 009181 251 WRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP 329 (541)
Q Consensus 251 ~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~ 329 (541)
+.++++. ++.+|+++++++++++|++|+++++ +|...++++|.++|++||++|++|+|++.+... .|.
T Consensus 136 v~vdvd~~~~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~----~g~---- 204 (438)
T PRK15407 136 VFVDVELPTYNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTY----DGR---- 204 (438)
T ss_pred EEEecCCCcCCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhc----CCe----
Confidence 9999974 8899999999999999999999885 688899999999999999999999998755431 111
Q ss_pred CCcCCC-CceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCC--------------------Cc----c---C
Q 009181 330 FDFSVQ-GVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG--------------------GL----Y---V 381 (541)
Q Consensus 330 ~~~~~~-gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~--------------------~~----~---~ 381 (541)
..... .+..+|+...|.+.++. .|+++++++++.+.... ..+|.. +. + .
T Consensus 205 -~~G~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (438)
T PRK15407 205 -MTGTFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIES-FRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKY 281 (438)
T ss_pred -eeeccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHHH-HHHhCcccccccccccccccccccccccccccccccc
Confidence 01111 23445555556544443 47777777665432211 111100 00 0 0
Q ss_pred CCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCC-eEEecCC-C--ee--EEEEecCC---CC
Q 009181 382 SPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPE-LFIIGRP-D--MT--IVAFGSDV---VD 452 (541)
Q Consensus 382 ~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~v~~~~-~--~~--~v~f~~~~---~~ 452 (541)
.....|.... +.-+.+++.....+.+++..++..++++++.+.|+.+++ +.+...+ . .+ .+.+.+.+ .+
T Consensus 282 ~~~~~G~n~r--msel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 359 (438)
T PRK15407 282 TYSHLGYNLK--ITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFT 359 (438)
T ss_pred cccccccccC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCC
Confidence 0001122222 224556665556678899999999999999999998875 3332221 2 11 33334432 35
Q ss_pred HHHHHHHHHhCCceecc-----C---------------CCCC----eEE-EEecCC---CHHHHHHHHHHHHHHHH
Q 009181 453 IFEVNDIMSSKGWHLNP-----L---------------QRPN----SIH-ICVTLQ---HVAVVDVFLRDLRESVE 500 (541)
Q Consensus 453 ~~~l~~~l~~~G~~~~~-----~---------------~~~~----~iR-i~~~~~---~~e~id~~i~~L~~~~~ 500 (541)
..++.+.|.++|+.... + ..|. +-| ++++.. +.+|++++++.|+++++
T Consensus 360 Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 360 RVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred HHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 78999999999963211 0 0110 011 344432 34899999999998874
No 280
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.77 E-value=5.5e-16 Score=168.11 Aligned_cols=296 Identities=13% Similarity=0.071 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEE
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~ 252 (541)
-.+.++..|+.||++... .+|+|+|.+|..++.++.. +| +.|+++..+|-|+..++.+.|+.+++
T Consensus 197 i~eAe~~aA~~fgAd~ty-------fvvNGTS~~n~av~~a~~~-----~G---d~VLvdRN~HKSv~~aLilsga~PVY 261 (713)
T PRK15399 197 HLEAEEYIARTFGAEQSY-------IVTNGTSTSNKIVGMYAAP-----AG---STLLIDRNCHKSLAHLLMMSDVVPIW 261 (713)
T ss_pred HHHHHHHHHHHhCCCcEE-------EEeCChHHHHHHHHHHhcC-----CC---CEEEeecccHHHHHHHHHHcCCeeEE
Confidence 345566899999998764 8899999999999999864 77 99999999999999999999999999
Q ss_pred eeCCC--C---CccCH-----HHHHHhhccC-----ceEEEeecCCCCCccccCHHHHHHHHHHcCCEE-EEeCCcccch
Q 009181 253 VPVDK--E---FRADV-----KAIKKYINRN-----TVLIVGSAPGFPHGIIDPIQELGELALSHGTCL-HVDLCLGGFV 316 (541)
Q Consensus 253 v~~~~--~---~~~d~-----~~Le~~i~~~-----t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~l-hvD~a~gg~~ 316 (541)
++... . +.++. +.++++|.++ |+.+++++||+ .|.+.|+++|+++| |+.+ |||+|||+..
T Consensus 262 l~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd~~~I~~~~---g~~~ilvDEAhgah~ 337 (713)
T PRK15399 262 LKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYNTDWIKQTL---DVPSIHFDSAWVPYT 337 (713)
T ss_pred ecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeCHHHHHHHh---CCCEEEEeccchhhh
Confidence 97642 1 23555 9999999753 46899999977 99999999999999 6776 7999999864
Q ss_pred hhhhhhcCCCCCCCCc-CCCCceEE---EeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCc
Q 009181 317 LPFAKKLGYPIPPFDF-SVQGVTSI---SVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG 392 (541)
Q Consensus 317 ~~f~~~~g~~~p~~~~-~~~gvdsi---s~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~ 392 (541)
. |..... +.... ...|.|.+ +-|+||.+.+-..++++.++.. +....+ +.. ..-....|.+..
T Consensus 338 ~-F~p~~~---~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~-vd~~~~--n~a------~~m~~STSPsY~ 404 (713)
T PRK15399 338 H-FHPIYQ---GKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE-YDEETF--NEA------FMMHTSTSPSYP 404 (713)
T ss_pred h-cCcccC---CcChhhCCCCCCeeeeeeeehhccccccchheeeeecCC-CCHHHH--HHH------HHHHcCCCcHHH
Confidence 3 322110 01111 11244555 8899999888888998888653 211110 000 001112244455
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCC------eEEecCC---------------------------
Q 009181 393 LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPE------LFIIGRP--------------------------- 439 (541)
Q Consensus 393 ~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~------~~v~~~~--------------------------- 439 (541)
+++++-.+.+.+....-++..++..+.+..+++.|.++.+ ++++.+.
T Consensus 405 LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~ 484 (713)
T PRK15399 405 IVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHM 484 (713)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccc
Confidence 6778887777665434467888888888889998888765 5666431
Q ss_pred --CeeEEEEecC-----------CCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 440 --DMTIVAFGSD-----------VVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 440 --~~~~v~f~~~-----------~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
+..=+.+..+ +.+...+.+.|.++|+.....+. ..+-+.++..++ ++++++++.|.++-+.
T Consensus 485 ~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~-~~vL~l~s~g~t~~~~~~L~~aL~~f~~~ 559 (713)
T PRK15399 485 FLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGP-YNLLFLFSIGIDKTKAMGLLRGLTEFKRA 559 (713)
T ss_pred cCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCC-CeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 1111112221 33677899999999987654433 456666776666 8999999999987543
No 281
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.76 E-value=4.9e-16 Score=162.85 Aligned_cols=297 Identities=20% Similarity=0.177 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHh-hcCC
Q 009181 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQ-YFNI 248 (541)
Q Consensus 170 ~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~-~~G~ 248 (541)
.....++.++++++.|.+ . + ++|+||++|+..|+++++....+ .+..+++|++....+..+...+. ..+.
T Consensus 80 ~~~~~~la~~l~~~~~~~--~----v--~~~~gg~eA~~~al~~a~~~~~~-~~~~~~~ii~~~~~yhg~~~~~~~~~~~ 150 (396)
T PRK02627 80 IEPQEELAEKLVELSGMD--K----V--FFCNSGAEANEAAIKLARKYGHK-KGIEKPEIITAENSFHGRTLATLSATGQ 150 (396)
T ss_pred CHHHHHHHHHHHhhcCCC--E----E--EECCCcHHHHHHHHHHHHHHhcc-cCCCCCeEEEECCCcCcccHHHHHhcCC
Confidence 455666778888887653 2 5 89999999999999998864322 23334678777766554433332 2222
Q ss_pred eEE---EeeCCCCC----ccCHHHHHHhhccCceEEEeecCCCCCcc-cc---CHHHHHHHHHHcCCEEEEeCCcccchh
Q 009181 249 KLW---RVPVDKEF----RADVKAIKKYINRNTVLIVGSAPGFPHGI-ID---PIQELGELALSHGTCLHVDLCLGGFVL 317 (541)
Q Consensus 249 ~v~---~v~~~~~~----~~d~~~Le~~i~~~t~~vv~~~~~~~~G~-id---~i~~I~~la~~~~i~lhvD~a~gg~~~ 317 (541)
... ..+..++. .-|++++++++.+++.+|+++.+++++|. +. .+++|.++|++||+++++|++|+++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~ 230 (396)
T PRK02627 151 PKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGR 230 (396)
T ss_pred ccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCc
Confidence 211 11221111 12899999999889999999999999994 33 389999999999999999999987633
Q ss_pred hhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHH
Q 009181 318 PFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIA 395 (541)
Q Consensus 318 ~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a 395 (541)
. |. .+.+...+ .|.+++ .|...++..+|+++.+++ +...... .. ...+..+ ...
T Consensus 231 ~-----g~---~~~~~~~~~~pdi~t~--sK~~~~G~rig~~~~~~~-~~~~~~~-------~~-~~~t~~~-----~~~ 286 (396)
T PRK02627 231 T-----GK---LFAYQHYGIEPDIMTL--AKGLGGGVPIGAVLAKEK-VADVFTP-------GD-HGSTFGG-----NPL 286 (396)
T ss_pred c-----Cc---eeeehhcCCCCCEEEE--cchhhCCcccEEEEEcHH-HHhccCC-------CC-CCCCCCC-----CHH
Confidence 1 11 01111112 355554 488555566898776543 3321110 00 0011111 122
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC----CCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCC
Q 009181 396 GAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI----PELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQ 471 (541)
Q Consensus 396 ~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~ 471 (541)
++.+++..+..-...+..++..++.+++++.|.++ +.+..+ .....++++.+ +.+..++.+.|.++|+.+...+
T Consensus 287 ~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~i~~-~~~~~~~~~~l~~~Gv~v~~~~ 364 (396)
T PRK02627 287 ACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEV-RGLGLMIGIEL-DRPAAEIVKKALEKGLLINVTG 364 (396)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeee-ccCcEEEEEEe-cCcHHHHHHHHHHCCeEEeecC
Confidence 44444333321112344566666666666666543 222222 23355666766 3367789999999998876543
Q ss_pred CCCeEEEEecCCC-HHHHHHHHHHHHHHHHHH
Q 009181 472 RPNSIHICVTLQH-VAVVDVFLRDLRESVETV 502 (541)
Q Consensus 472 ~~~~iRi~~~~~~-~e~id~~i~~L~~~~~~l 502 (541)
++.+|++++... .+++++++++|+++++++
T Consensus 365 -~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 365 -DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred -CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 468999987444 499999999999988654
No 282
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.76 E-value=2.2e-16 Score=171.14 Aligned_cols=296 Identities=13% Similarity=0.091 Sum_probs=208.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEE
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~ 252 (541)
-.+.++..|+.||++... .+|+|+|.+|..++.++.. +| +.|+++..+|-|+..++.+.|+.+++
T Consensus 197 i~eAe~~AA~~fgAd~ty-------fvvNGTS~~n~av~~a~~~-----~G---d~VLvdRN~HKSv~haLilsga~PVY 261 (714)
T PRK15400 197 HKEAEEYIARVFNADRSY-------MVTNGTSTANKIVGMYSAP-----AG---STVLIDRNCHKSLTHLMMMSDVTPIY 261 (714)
T ss_pred HHHHHHHHHHHhCCCcEE-------EEeCchHHHHHHHHHHhcC-----CC---CEEEeecccHHHHHHHHHHcCCeEEE
Confidence 345666999999999764 7899999999999998764 77 99999999999999999999999999
Q ss_pred eeCCC-C----CccC-----HHHHHHhhccC-----ceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchh
Q 009181 253 VPVDK-E----FRAD-----VKAIKKYINRN-----TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVL 317 (541)
Q Consensus 253 v~~~~-~----~~~d-----~~~Le~~i~~~-----t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~ 317 (541)
++... . +.++ .+.++++|.++ |+.+++++||+ .|.+.|+++|+++|+.++ +|||+|||+...
T Consensus 262 l~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd~~~I~~~~~~~~--ilvDEAwgah~~ 338 (714)
T PRK15400 262 FRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYNTDFIKKTLDVKS--IHFDSAWVPYTN 338 (714)
T ss_pred ecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecCHHHHHHHhCCCC--EEEEccchhhhc
Confidence 97652 1 2345 89999999754 34799999977 999999999999999887 799999987653
Q ss_pred hhhhhcCCCCCCCCcCCCCc---e--EEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCc
Q 009181 318 PFAKKLGYPIPPFDFSVQGV---T--SISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG 392 (541)
Q Consensus 318 ~f~~~~g~~~p~~~~~~~gv---d--sis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~ 392 (541)
|...+. +.... ..|. | +++-|+||.+.+-..++++.++.. +....+ +.. ..-....|.+..
T Consensus 339 -F~p~~~---~~sam-~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-vd~~~~--n~a------~~m~~STSPsY~ 404 (714)
T PRK15400 339 -FSPIYE---GKCGM-SGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETF--NEA------YMMHTTTSPHYG 404 (714)
T ss_pred -cCcccC---CcChh-hcCCCCCCceEEEEchhhcccchhHHhHHHHcCC-CCHHHH--HHH------HHHHcCCCcHHH
Confidence 221110 01111 1333 4 888899999877777887766442 111110 000 000111244455
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCC------eEEecCCC--------------------------
Q 009181 393 LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPE------LFIIGRPD-------------------------- 440 (541)
Q Consensus 393 ~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~------~~v~~~~~-------------------------- 440 (541)
+++++-.+.+.+....-++..++..+.+..+++.|.++++ ++++++..
T Consensus 405 l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~ 484 (714)
T PRK15400 405 IVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHM 484 (714)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCccccccccc
Confidence 6778888877665444577888888999999999988877 77764321
Q ss_pred ---eeEEEEecC-----------CCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 441 ---MTIVAFGSD-----------VVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 441 ---~~~v~f~~~-----------~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
..=+.+..+ +.....+.+.|.++|+.....+ ...+-+.++..++ +++++++++|.++-+.
T Consensus 485 ~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d-~~~iLfl~s~g~t~~~~~~L~~aL~~f~~~ 559 (714)
T PRK15400 485 YLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG-PYNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (714)
T ss_pred ccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecC-CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 111122221 2246789999999997665443 3457777776666 8999999999987443
No 283
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.76 E-value=4.4e-16 Score=158.44 Aligned_cols=285 Identities=20% Similarity=0.166 Sum_probs=202.2
Q ss_pred ccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH----
Q 009181 164 DIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY---- 239 (541)
Q Consensus 164 ~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~---- 239 (541)
...|....+|+ .++++=|.+. ++.+++|..|+..++.++.. .| |+|+++...|...
T Consensus 60 ~~nPT~~~lE~----~~a~LEg~~~--------~~afsSGmaAI~~~~l~ll~-----~G---D~vl~~~~~YG~t~~~~ 119 (396)
T COG0626 60 TGNPTRDALEE----ALAELEGGED--------AFAFSSGMAAISTALLALLK-----AG---DHVLLPDDLYGGTYRLF 119 (396)
T ss_pred CCCccHHHHHH----HHHHhhCCCc--------EEEecCcHHHHHHHHHHhcC-----CC---CEEEecCCccchHHHHH
Confidence 33466666666 6777665543 37889999999999888864 67 9999999988774
Q ss_pred HHHHhhcCCeEEEeeCCCCCccCHHHHHHhhc-cCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhh
Q 009181 240 DKAAQYFNIKLWRVPVDKEFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLP 318 (541)
Q Consensus 240 ~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~-~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~ 318 (541)
.+..+.+|+++..++.. +.+++++++. ++|++|.+..|+||+..+.||++|+++|+++|+.++||.+++.+++
T Consensus 120 ~~~l~~~gi~~~~~d~~-----~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~- 193 (396)
T COG0626 120 EKILQKFGVEVTFVDPG-----DDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVL- 193 (396)
T ss_pred HHHHHhcCeEEEEECCC-----ChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccc-
Confidence 44555679999988764 6677777777 5999999999999999999999999999999999999999876654
Q ss_pred hhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHH
Q 009181 319 FAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAG 396 (541)
Q Consensus 319 f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~ 396 (541)
.+....|+|++.-+..||+.|-.. .|+++.+++++.+..+.......|. -.+ ..-
T Consensus 194 -----------q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~----------~l~--p~d 250 (396)
T COG0626 194 -----------QRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGA----------VLS--PFD 250 (396)
T ss_pred -----------cChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCC----------CCC--HHH
Confidence 333567899999999999655544 4644445544433221111111111 111 225
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC-----------------CeeEEEEecCC-CCHHHHHH
Q 009181 397 AWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP-----------------DMTIVAFGSDV-VDIFEVND 458 (541)
Q Consensus 397 ~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~f~~~~-~~~~~l~~ 458 (541)
+|..+ -|.+.+.-+.++..++|..+++.|++.|.++-+.-| .+++++|.+.+ ....++.+
T Consensus 251 A~l~l--RGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~ 328 (396)
T COG0626 251 AWLLL--RGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLD 328 (396)
T ss_pred HHHHH--hccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHH
Confidence 67777 466778888999999999999999999888754333 35799999887 33444444
Q ss_pred HHHhC------C-c---ee-c--------------cCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 459 IMSSK------G-W---HL-N--------------PLQR-PNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 459 ~l~~~------G-~---~~-~--------------~~~~-~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
.|.-- | . .. + ..+. ++-+|+|++. |+++.++++|+++++.+
T Consensus 329 ~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl---Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 329 SLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL---EDVEDLIADLEQALAKA 395 (396)
T ss_pred hCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHhh
Confidence 43321 1 0 00 0 0111 2679999998 77888999999988764
No 284
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=8.2e-16 Score=151.73 Aligned_cols=302 Identities=14% Similarity=0.140 Sum_probs=213.9
Q ss_pred ccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCc---cchHH
Q 009181 164 DIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSA---HSAYD 240 (541)
Q Consensus 164 ~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~---h~s~~ 240 (541)
.....+.++|..+++...++||++-.+ +--.+|+.||..+..++.+ +| |.|+-.+.. |-+.-
T Consensus 65 gGce~VD~vE~laierak~LFga~~an-------VQPhSGs~AN~av~~All~-----pG---Dtimgm~l~~GGHltHg 129 (413)
T COG0112 65 GGCEYVDEVEELAIERAKKLFGAEYAN-------VQPHSGSQANQAVYLALLQ-----PG---DTIMGLDLSHGGHLTHG 129 (413)
T ss_pred CCCeeHHHHHHHHHHHHHHHhCCCccc-------cCCCCchHHHHHHHHHHcC-----CC---CeEecccCCCCCcccCC
Confidence 334557888999999999999999776 4667789999999999875 78 888765544 44433
Q ss_pred HHHhhcCC--eEEEeeCC-CCCccCHHHHHHhhcc-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccch
Q 009181 241 KAAQYFNI--KLWRVPVD-KEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFV 316 (541)
Q Consensus 241 ka~~~~G~--~v~~v~~~-~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~ 316 (541)
......|. +++..+++ +++.+|.|++++.+.+ +|++|++-.- .+-...|++++.++|++.|.+|.+|.|+=.++
T Consensus 130 ~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~S--aY~r~id~~~~reIad~VGA~L~~DmAHiaGL 207 (413)
T COG0112 130 SPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGS--AYSRPIDFKRFREIADEVGAYLMVDMAHVAGL 207 (413)
T ss_pred CCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECcc--ccccccCHHHHHHHHHHhCceEEehHHHHHHH
Confidence 33344454 66666777 4799999999998765 7888875544 35567899999999999999999999985544
Q ss_pred hhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccc-cccccCCCccCCCcccCCCCCchHH
Q 009181 317 LPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFV-AVTEWSGGLYVSPTVAGSRPGGLIA 395 (541)
Q Consensus 317 ~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gsr~~~~~a 395 (541)
+. .|. +.--.+-+|+++.++||.+.||.| |++++++.++....-. ..+.+ .|..--..++
T Consensus 208 VA----~G~----~p~P~~~AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~aVFPg~----------qggpl~HviA 268 (413)
T COG0112 208 IA----GGV----HPNPLPHADVVTTTTHKTLRGPRG-GIILTNDEELAKKINSAVFPGL----------QGGPLMHVIA 268 (413)
T ss_pred Hh----ccc----CCCCCCccceEeCCcccCCCCCCc-eEEEeccHHHHHHhhhhcCCcc----------CCChHHHHHH
Confidence 41 221 111223379999999999878775 5567776554433211 22222 2222222377
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC-CCeeEEEEecC--CCCHHHHHHHHHhCCceeccC--
Q 009181 396 GAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR-PDMTIVAFGSD--VVDIFEVNDIMSSKGWHLNPL-- 470 (541)
Q Consensus 396 ~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~f~~~--~~~~~~l~~~l~~~G~~~~~~-- 470 (541)
+...++......+|++..++..++++.|++.|.+. |++++.. .+.+.+.++.. +.+..+....|.+.|+.++.-
T Consensus 269 akaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~i 347 (413)
T COG0112 269 AKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAI 347 (413)
T ss_pred HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCC
Confidence 77778877778899999999999999999999996 9999853 34555555544 457788888888888766532
Q ss_pred -------CCCCeEEEEecCCCH-----HHHHHHHHHHHHHHHHH
Q 009181 471 -------QRPNSIHICVTLQHV-----AVVDVFLRDLRESVETV 502 (541)
Q Consensus 471 -------~~~~~iRi~~~~~~~-----e~id~~i~~L~~~~~~l 502 (541)
..+..|||.....++ +|++++.+-|.++++..
T Consensus 348 P~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~ 391 (413)
T COG0112 348 PFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGL 391 (413)
T ss_pred CCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhcc
Confidence 223679997766654 57777777777776543
No 285
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.74 E-value=1.7e-16 Score=162.02 Aligned_cols=293 Identities=17% Similarity=0.182 Sum_probs=188.6
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccce--EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCC---ccchHH
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCG--NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVS---AHSAYD 240 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G--~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~---~h~s~~ 240 (541)
...+.++|.-+++.+.++||+++.. ++ +=..+|+.|+..++.++.+ +| |+|+.-+. .|.+..
T Consensus 61 ~~~id~iE~la~~ra~~lF~~~~~~-----w~anvqp~SGs~An~av~~aLl~-----pG---D~Im~l~l~~GGHlshg 127 (399)
T PF00464_consen 61 CEYIDEIEELAIERAKELFGAEPKE-----WYANVQPHSGSQANLAVYMALLK-----PG---DTIMGLSLPHGGHLSHG 127 (399)
T ss_dssp THHHHHHHHHHHHHHHHHHT-STTT-----EEEE---SSHHHHHHHHHHHHT------TT----EEEEEEGGGT--GGGT
T ss_pred cchhhHHHHHHHHHHHHHhCCCccc-----ceEEeecCCchHHHHHHHHHHHh-----hc---CcEEecChhhccccccc
Confidence 3457789999999999999999443 21 3466789999999999875 77 88876544 355543
Q ss_pred HHHhh-----c--CCeEEEeeCC-CCCccCHHHHHHhhcc-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCC
Q 009181 241 KAAQY-----F--NIKLWRVPVD-KEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 241 ka~~~-----~--G~~v~~v~~~-~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a 311 (541)
..... . ..+....+++ +++.+|.+++++.+.+ +|++|++..-++| ...|++++.++|++.|.+|++|.+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~--~~~d~~~~reIad~vga~l~~D~s 205 (399)
T PF00464_consen 128 SSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYP--RPIDFKRFREIADEVGAYLMADIS 205 (399)
T ss_dssp -TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTS--S---HHHHHHHHHHTT-EEEEE-T
T ss_pred ccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhcc--CccCHHHHHHHHHhcCcEEEeccc
Confidence 33333 2 3478888888 5899999999998874 7898888776543 457899999999999999999999
Q ss_pred cccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEe-------------cccccccccccccccCCC
Q 009181 312 LGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYR-------------NREIRKHQFVAVTEWSGG 378 (541)
Q Consensus 312 ~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~-------------~~~~~~~~~~~~~~~~~~ 378 (541)
+-.+++. .|.-..|+ +.+|++++++||.+.||.| |+++++ ++++....- .
T Consensus 206 H~~GLIa----~g~~~~P~----~~ADvvt~sThKtl~GPrg-giI~~~~~~~~~~~~~~~~~~~l~~~I~--~------ 268 (399)
T PF00464_consen 206 HIAGLIA----GGLFPNPF----PYADVVTGSTHKTLRGPRG-GIILTNKGSKNVDKKGKEIDEELAEKID--S------ 268 (399)
T ss_dssp TTHHHHH----TTSS--GC----CTSSEEEEESSGGG-SSS--EEEEES-SEEEE-TTS-EEEHHHHHHHH--H------
T ss_pred cccccee----hheecCcc----ccceEEEeeccccccccCc-eEEEEcCCccccCCcccccHHHHHHHhc--c------
Confidence 9666553 12101123 3479999999999777775 777776 122111100 0
Q ss_pred ccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC-CCeeEEEEecCC--CCHHH
Q 009181 379 LYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR-PDMTIVAFGSDV--VDIFE 455 (541)
Q Consensus 379 ~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~f~~~~--~~~~~ 455 (541)
..-|...|+.-...+++...++.......+++..+++.++++.|++.|.+. |++++.. .+.+.|.++..+ .+..+
T Consensus 269 -avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~~~~~g~~ 346 (399)
T PF00464_consen 269 -AVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVDLRSFGIDGKE 346 (399)
T ss_dssp -HHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGGGTS-HHH
T ss_pred -ccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEEecccccchHH
Confidence 011233333333446777778877666778999999999999999999997 9999853 567888888754 47788
Q ss_pred HHHHHHhCCceeccCC--------CCCeEEEEecCCCH-----HHHHHHH
Q 009181 456 VNDIMSSKGWHLNPLQ--------RPNSIHICVTLQHV-----AVVDVFL 492 (541)
Q Consensus 456 l~~~l~~~G~~~~~~~--------~~~~iRi~~~~~~~-----e~id~~i 492 (541)
..+.|.+.|+.++.-. .+..+|+.....++ +|++++.
T Consensus 347 a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA 396 (399)
T PF00464_consen 347 AEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIA 396 (399)
T ss_dssp HHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHH
T ss_pred HHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHH
Confidence 8999999998765321 23689998876654 4555443
No 286
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.74 E-value=5.3e-16 Score=159.14 Aligned_cols=320 Identities=11% Similarity=0.037 Sum_probs=216.1
Q ss_pred HHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC
Q 009181 144 HFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (541)
Q Consensus 144 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G 223 (541)
+++.+.+++.+..-+.. ..+|...++-.++.+.+.++++.+.+. + +-+++++||.++..++..+.. ++|
T Consensus 15 ~~~~~~~~~~~~~~~~~---HRs~~F~~i~~e~~~~L~~l~~~~~~~---~-v~~l~GsGT~a~Eaa~~nl~~----~~g 83 (374)
T TIGR01365 15 RPGWSIEELKNAPLGRS---HRSKLGKEKLAEAIKKTREMLGVPADY---L-IGIVPASDTGAVEMALWSMLG----CRG 83 (374)
T ss_pred CchhhHHHHhhhhcccC---cCCHHHHHHHHHHHHHHHHHhCCCCCc---E-EEEECCchHHHHHHHHHHcCC----CCC
Confidence 33445555543322221 236788899999999999999986432 1 336799999999999988752 134
Q ss_pred CCCCeEEecCCccch--HH-HHHhhcCC-eEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHH
Q 009181 224 ITRPEMIIPVSAHSA--YD-KAAQYFNI-KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELA 299 (541)
Q Consensus 224 i~~~~vi~~~~~h~s--~~-ka~~~~G~-~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la 299 (541)
+.+++.. .++ |. +.++.+|+ ++..+..+.+-.+|+++++. +++ |++++..|.||+..|++++.+.+
T Consensus 84 ---~~vLv~g--~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~~~---v~~vhnETSTGv~npv~~i~~~~ 153 (374)
T TIGR01365 84 ---VDVLAWE--SFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--KND---VVFTWNGTTSGVRVPNGDFIPAD 153 (374)
T ss_pred ---CeEEEEC--HHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--CCC---EEEecCCCchheecccccccccc
Confidence 6677653 444 34 77888999 58888877666789999973 222 67899999999999997766432
Q ss_pred HHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEeccccccccc-ccccccCCC
Q 009181 300 LSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQF-VAVTEWSGG 378 (541)
Q Consensus 300 ~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~-~~~~~~~~~ 378 (541)
++..++||+..+-+.. ++++. ++|.+..+.+|.+.+|+|.|+++++++.+..... ....+|+.-
T Consensus 154 --~~~lliVDavSs~g~~-----------~l~~d--~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~ 218 (374)
T TIGR01365 154 --REGLTICDATSAAFAQ-----------DLDYH--KLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKI 218 (374)
T ss_pred --CCCcEEEEccchhcCC-----------CCChh--HCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhh
Confidence 5899999999654433 34444 5999999999999999999999988776543211 000011110
Q ss_pred cc--C--C--Cc-c-cCCCCCchHHHHHHHHHHH---hHH-HHHHHHHHHHHHHHHHHHHhhcCCCeEEecC----CCee
Q 009181 379 LY--V--S--PT-V-AGSRPGGLIAGAWAALMSL---GQE-GYLENTKAIMEVSESIQKGIKEIPELFIIGR----PDMT 442 (541)
Q Consensus 379 ~~--~--~--~~-~-~gsr~~~~~a~~~~al~~l---g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~----~~~~ 442 (541)
.. . . .. . ..+++...+..+++....+ ..+ |++.+.++..++++.+++.++++..++++.. ....
T Consensus 219 ~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~t 298 (374)
T TIGR01365 219 FRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNT 298 (374)
T ss_pred hccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCC
Confidence 00 0 0 00 0 1123333444555554444 454 8999999999999999999999844777753 2345
Q ss_pred EEEEecCC--C-----C-----HHHHHHHHHhCCceecc-CC--CCCeEEEE-ecCCCHHHHHHHHHHHHHHH
Q 009181 443 IVAFGSDV--V-----D-----IFEVNDIMSSKGWHLNP-LQ--RPNSIHIC-VTLQHVAVVDVFLRDLRESV 499 (541)
Q Consensus 443 ~v~f~~~~--~-----~-----~~~l~~~l~~~G~~~~~-~~--~~~~iRi~-~~~~~~e~id~~i~~L~~~~ 499 (541)
++++..++ . + ..++.+.|.++|+.+.. .+ .+..+||. ++..+.+|++.+++.|.=+.
T Consensus 299 vt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~ 371 (374)
T TIGR01365 299 SVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAF 371 (374)
T ss_pred eEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHH
Confidence 56676633 2 2 57899999999986653 22 13689994 56666699999999887554
No 287
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.74 E-value=3e-15 Score=157.14 Aligned_cols=293 Identities=18% Similarity=0.120 Sum_probs=177.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecC-CccchHHHHHhhcC-----
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPV-SAHSAYDKAAQYFN----- 247 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~-~~h~s~~ka~~~~G----- 247 (541)
.++.+.++++.+.+ . + .++++|++|+..|++.+|.+..+..+..+..|+..+ ..|.+...+....|
T Consensus 85 ~~l~~~l~~~~~~~--~----~--~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~ 156 (403)
T PRK05093 85 LRLAKKLIDATFAE--R----V--FFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYS 156 (403)
T ss_pred HHHHHHHHhhCCCC--E----E--EEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhh
Confidence 45666777776543 2 4 899999999999999998765432222345565544 45665544433221
Q ss_pred -------CeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEeCCcccch
Q 009181 248 -------IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLGGFV 316 (541)
Q Consensus 248 -------~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD~a~gg~~ 316 (541)
.++..+|.+ |++++++.+.+++++|+++..++..|.+.+ +++|.++|++||+++++|++|+++.
T Consensus 157 ~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g 231 (403)
T PRK05093 157 DGFGPKPADITHVPFN-----DLAAVKAVIDDHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMG 231 (403)
T ss_pred hcCCCCCCCcEEeCCC-----CHHHHHHHhcCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 234444443 889999999888999998854443444433 8999999999999999999998763
Q ss_pred hhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHH
Q 009181 317 LPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAG 396 (541)
Q Consensus 317 ~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~ 396 (541)
. .|... .+.......|..++ .|.+.++..+|+++.+++ +....... ..++..+.....
T Consensus 232 ~-----~g~~~-~~~~~~~~pdi~s~--sK~l~~G~rig~vv~~~~-i~~~l~~~-------------~~~~t~~~~~~~ 289 (403)
T PRK05093 232 R-----TGDLF-AYMHYGVTPDILTS--AKALGGGFPIGAMLTTAE-IASHFKVG-------------THGSTYGGNPLA 289 (403)
T ss_pred C-----Cccch-hhhhcCCCCCEEEe--cccccCCcceEEEEEcHH-HHhhcCCC-------------CCCCCCCCCHHH
Confidence 2 11100 01111112355444 488655555898777543 32211100 001111111223
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCC-CeEEecC--CCeeEEEEecCCC---CHHHHHHHHHhCCceeccC
Q 009181 397 AWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIP-ELFIIGR--PDMTIVAFGSDVV---DIFEVNDIMSSKGWHLNPL 470 (541)
Q Consensus 397 ~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~~--~~~~~v~f~~~~~---~~~~l~~~l~~~G~~~~~~ 470 (541)
+++++..+....-.+..++..++.+++.+.|+++. .+.++.. ....++++.+.+. +..++.+.|.++|+.+...
T Consensus 290 ~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~ 369 (403)
T PRK05093 290 CAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVA 369 (403)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecC
Confidence 44443322111123456777788888888888751 1112212 2245556655432 4568889999999776643
Q ss_pred CCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 471 QRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 471 ~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
+ ++.+|++++..++ +++++++++|+++++.+
T Consensus 370 g-~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 370 G-PDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred C-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3 4689998887644 99999999999988654
No 288
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.74 E-value=3.1e-15 Score=156.04 Aligned_cols=297 Identities=19% Similarity=0.141 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecC-CccchHHHHHhhcCC
Q 009181 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPV-SAHSAYDKAAQYFNI 248 (541)
Q Consensus 170 ~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~-~~h~s~~ka~~~~G~ 248 (541)
.+.+.++.+++++..+. +. + .++++|+||+..|++++|.+..++ +-.+.+|+..+ ..|.+...++...|.
T Consensus 77 ~~~~~~la~~l~~~~~~--~~----v--~f~~SGseA~e~Aik~ar~~~~~~-~~~r~~ii~~~~~yHG~t~~~~~~s~~ 147 (395)
T PRK03715 77 NEPMAKLAGLLTQHSCF--DK----V--FFANSGAEANEGAIKLARKWGRKH-KNGAYEIITFDHSFHGRTLATMSASGK 147 (395)
T ss_pred CHHHHHHHHHHhhccCC--CE----E--EEeCCcHHHHHHHHHHHHHHhhcc-CCCCcEEEEECCCcCCChHHHHhhcCC
Confidence 35566667777765433 22 4 899999999999999998753321 11134565554 567776666665553
Q ss_pred eEE---EeeCCCCC----ccCHHHHHHhhccCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEeCCcccchh
Q 009181 249 KLW---RVPVDKEF----RADVKAIKKYINRNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLGGFVL 317 (541)
Q Consensus 249 ~v~---~v~~~~~~----~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD~a~gg~~~ 317 (541)
... ..|..+.+ .-|++++++++.+++.+|++...+...|.+.| +++|.++|++||+++++|+++.|+-.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GR 227 (395)
T PRK03715 148 PGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGR 227 (395)
T ss_pred cccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCC
Confidence 211 11111111 24789999999888999999999888888876 99999999999999999999987522
Q ss_pred hhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHH
Q 009181 318 PFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIA 395 (541)
Q Consensus 318 ~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a 395 (541)
.|. .+.+...| .|+++++ |.+.++..+|+++.+++ +.. + ..... ..+..|.. ...+
T Consensus 228 -----tG~---~~a~~~~gv~PDi~t~g--K~lg~G~p~~av~~~~~-i~~--~--~~~~~-----~~T~~g~p--l~~a 285 (395)
T PRK03715 228 -----TGT---LFAYELSGIEPDIMTLG--KGIGGGVPLAALLAKAE-VAV--F--EAGDQ-----GGTYNGNP--LMTA 285 (395)
T ss_pred -----Ccc---hhhHhhcCCCCceeeeh--hhhhCCcceEEEEEccc-ccc--c--cCCCc-----CCCCCCCH--HHHH
Confidence 221 01111122 4777664 77655566787776554 321 1 01111 11112221 1133
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC---CCeEEecCCCeeEEEEecCCCCHHHHHHHHHhC---Cceecc
Q 009181 396 GAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI---PELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSK---GWHLNP 469 (541)
Q Consensus 396 ~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~---G~~~~~ 469 (541)
+..++++.+.. .+..++..++.++|++.|+++ .++.-+ .....++.+.+.+.....+.+.+.+. |+.+..
T Consensus 286 aala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v-rG~Glm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~ 361 (395)
T PRK03715 286 VGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGE-RGEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNA 361 (395)
T ss_pred HHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeE-EcceeEEEEEecCchHHHHHHHHHhccCCCEEEee
Confidence 55556655543 456778888888888888753 123212 12356666666442234455555555 977654
Q ss_pred CCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 470 LQRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 470 ~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
.. ++.+|++++..++ +++|++++.|+++++++
T Consensus 362 ~~-~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 362 PR-PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred cC-CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 33 4689999988766 99999999999998764
No 289
>PLN02452 phosphoserine transaminase
Probab=99.73 E-value=9.5e-16 Score=157.26 Aligned_cols=301 Identities=14% Similarity=0.089 Sum_probs=210.7
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch--HHHHH
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YDKAA 243 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s--~~ka~ 243 (541)
++...++-.++++.+.++++.|++. ++ -+++.|||.++.+++..+.. +| +++++-.+..++ +.+.+
T Consensus 47 s~~f~~i~~~~~~~L~~l~~~p~~y---~v-~~l~Gsgt~~~ea~~~nl~~-----~~---~~~l~~~~G~fg~r~~~~a 114 (365)
T PLN02452 47 GKEFLSIIQKAEADLRELLDIPDNY---EV-LFLQGGASTQFAAIPLNLCK-----PG---DKADFVVTGSWSKKAAKEA 114 (365)
T ss_pred chHHHHHHHHHHHHHHHHhCCCCCc---eE-EEEeCccHHHHHHHHHhcCC-----CC---CeEEEEECCHHHHHHHHHH
Confidence 5777888899999999999997543 13 35667899999998888753 44 567666667766 66777
Q ss_pred hhcCCeEEEeeCCCC---CccCHHHHHHhhccCceEEEeecCCCCCcc-ccCHHHHHHHHHHcCCEEEEeCCcccchhhh
Q 009181 244 QYFNIKLWRVPVDKE---FRADVKAIKKYINRNTVLIVGSAPGFPHGI-IDPIQELGELALSHGTCLHVDLCLGGFVLPF 319 (541)
Q Consensus 244 ~~~G~~v~~v~~~~~---~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~-id~i~~I~~la~~~~i~lhvD~a~gg~~~~f 319 (541)
+.+|...+.....+. ...++++++ .+++...|.+++..|.+|+ +.|++++.+ ++++||++...+..
T Consensus 115 ~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~-- 184 (365)
T PLN02452 115 KKYCKTNVIASGKDEKYTKIPSVSEWE--LTPDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSK-- 184 (365)
T ss_pred HHhCCCcEEEecCCCCCCCCCChHHcC--CCCCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCc--
Confidence 778864443322222 245666652 2456889999999999999 588888753 89999999764443
Q ss_pred hhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEeccccccccc--ccccccCCCccCCCcccCCCCCchHHHH
Q 009181 320 AKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQF--VAVTEWSGGLYVSPTVAGSRPGGLIAGA 397 (541)
Q Consensus 320 ~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~gsr~~~~~a~~ 397 (541)
++|+..+|+|+ .+.||. ++|.|.|+++++++.+.+... ....+|..- .......++.+-..++++
T Consensus 185 ---------pidv~~~~v~~--~saqK~-lGP~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~-~~~~s~~~TP~v~~i~~l 251 (365)
T PLN02452 185 ---------PVDVSKYGVIY--AGAQKN-VGPSGVTIVIIRKDLIGNARPITPGMLDYKIH-AENDSLYNTPPCFGIYMC 251 (365)
T ss_pred ---------ccCHHHcCEEE--Eecccc-cCCCCeEEEEEcHHHHhhcccCCCchhhHHHH-HhcCCccCChhHHHHHHH
Confidence 47777788866 589998 589999998888765533211 011111100 001122345555668889
Q ss_pred HHHHHHHhHH-HHHHHHHHHHHHHHHHHHHhhcCCCeEEe-cC---CCeeEEEEecCCC-CHHHHHHHHHhCCceec-cC
Q 009181 398 WAALMSLGQE-GYLENTKAIMEVSESIQKGIKEIPELFII-GR---PDMTIVAFGSDVV-DIFEVNDIMSSKGWHLN-PL 470 (541)
Q Consensus 398 ~~al~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~---~~~~~v~f~~~~~-~~~~l~~~l~~~G~~~~-~~ 470 (541)
..+++++..+ |++.+.++..++++++++.|++.+|+... .+ ....+++|..++. ...++.+.+.++|...- ..
T Consensus 252 ~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~ 331 (365)
T PLN02452 252 GLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGH 331 (365)
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccCCc
Confidence 9999988776 89999999999999999999998887221 11 1346889988764 45688899999997543 22
Q ss_pred CCCCeEEEEe-cCCCHHHHHHHHHHHHHHHHH
Q 009181 471 QRPNSIHICV-TLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 471 ~~~~~iRi~~-~~~~~e~id~~i~~L~~~~~~ 501 (541)
..-+.+|+|+ +..+.++++.|++.+++.-++
T Consensus 332 r~~gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 332 RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred cccCceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 2224499976 444559999999999987643
No 290
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.73 E-value=1.6e-15 Score=157.93 Aligned_cols=283 Identities=19% Similarity=0.175 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCc-cchHHHHHhhcCC
Q 009181 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSA-HSAYDKAAQYFNI 248 (541)
Q Consensus 170 ~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~-h~s~~ka~~~~G~ 248 (541)
.+++.++.+++++..+.+ . + +++++|++|+..|++.++.+ .| +++|++.+.. |.+........+.
T Consensus 70 ~~~~~~la~~l~~~~~~~--~----~--~~~~sG~~a~~~A~~~a~~~----~g--~~~vi~~~~~~Hg~~~~~~~~~~~ 135 (377)
T PRK02936 70 NSLQEEVASLLAENSAGD--L----V--FFCNSGAEANEAALKLARKH----TG--KSKIVTFEQSFHGRTFGTMSATGQ 135 (377)
T ss_pred CHHHHHHHHHHHhcCCCC--E----E--EEeCCcHHHHHHHHHHHHHh----cC--CCeEEEECCCcCCCcHHhhhccCC
Confidence 456677777877766542 2 4 89999999999999988753 22 2457666554 5444444433332
Q ss_pred ------------eEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEeCCc
Q 009181 249 ------------KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCL 312 (541)
Q Consensus 249 ------------~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD~a~ 312 (541)
.+..+|.+ |++++++.+.+++.+|++..+.++.|...+ +++|.++|++||+++++|++|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~ 210 (377)
T PRK02936 136 EKIKEGFGPLLPGFTHVPFN-----DIKALKEVMNEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQ 210 (377)
T ss_pred ccccccCCCCCCCceEeCCC-----CHHHHHHhccCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 12223322 789999999989999999999988887643 999999999999999999999
Q ss_pred ccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCC
Q 009181 313 GGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 313 gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~ 390 (541)
.++.. .|. .+.+...+ .|.++ ..|.+.++..+|+++.+ +++..... ... .++..
T Consensus 211 ~g~g~-----~g~---~~~~~~~~~~~di~t--~sK~l~~G~~ig~v~~~-~~~~~~~~-------~~~------~~~t~ 266 (377)
T PRK02936 211 TGIGR-----TGT---LFAYEQFGLDPDIVT--VAKGLGNGIPVGAMIGK-KELGTAFG-------PGS------HGSTF 266 (377)
T ss_pred cCCCc-----Cch---hhHHHhhCCCCcEEE--EcccccCCCccEEEEEc-HHHHhhcc-------CCC------CCCCC
Confidence 77532 111 01111112 25554 46885544457876654 44332210 000 01111
Q ss_pred CchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhc----CCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCce
Q 009181 391 GGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKE----IPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWH 466 (541)
Q Consensus 391 ~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~ 466 (541)
+...+++.+++..+......+..++..++.+++++.|++ .+.+..+ .+...++++.+.+ +..++.+.|.++|+.
T Consensus 267 ~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~~~~i~~~~-~~~~~~~~l~~~gv~ 344 (377)
T PRK02936 267 GGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNI-RGKGLMIGIECTE-EVAPVIEQLREEGLL 344 (377)
T ss_pred CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE-eecceEEEEEecc-hHHHHHHHHHHCCeE
Confidence 112334444444442222234556667777777777765 2333222 1344567777654 366788899999987
Q ss_pred eccCCCCCeEEEEecCCCH-HHHHHHHHHHHHH
Q 009181 467 LNPLQRPNSIHICVTLQHV-AVVDVFLRDLRES 498 (541)
Q Consensus 467 ~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~ 498 (541)
+...+ .+.+|++++..++ +++++++++|+++
T Consensus 345 v~~~g-~~~lRi~p~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 345 VLSAG-PNVIRLLPPLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred EecCC-CCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 65533 4689999865544 9999999999875
No 291
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.72 E-value=4.5e-15 Score=155.89 Aligned_cols=294 Identities=14% Similarity=0.081 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc-hHHHHHhhcCC---
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS-AYDKAAQYFNI--- 248 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~-s~~ka~~~~G~--- 248 (541)
..++.+.++++++.+ . + .++++|+||+..|++++|.+.....+..+.+|+..+.+|. ....+....+.
T Consensus 83 ~~~la~~l~~~~~~~--~----v--~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~ 154 (406)
T PRK12381 83 VLRLAKKLIDATFAD--R----V--FFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKY 154 (406)
T ss_pred HHHHHHHHHhhCCCC--e----E--EEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCccc
Confidence 345666777776543 2 4 8999999999999999987643221112466776665544 44433333332
Q ss_pred ---------eEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccc-----cCHHHHHHHHHHcCCEEEEeCCccc
Q 009181 249 ---------KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGII-----DPIQELGELALSHGTCLHVDLCLGG 314 (541)
Q Consensus 249 ---------~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~i-----d~i~~I~~la~~~~i~lhvD~a~gg 314 (541)
.+..+|. -|++++++.+++++.+|++. |.+++|-+ +.+++|.++|++||+++++|+++.|
T Consensus 155 ~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG 228 (406)
T PRK12381 155 SQDFAPLPPDIRHAAY-----NDLNSASALIDDQTCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTG 228 (406)
T ss_pred ccCCCCCCCCeeEeCC-----CCHHHHHHhccCCeeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhC
Confidence 1233333 38899999998888888886 56666643 3489999999999999999999976
Q ss_pred chhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCc
Q 009181 315 FVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG 392 (541)
Q Consensus 315 ~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~ 392 (541)
+.. .|. .+.+...+ .|++++ .|.+.++..+|+++.+++ +...... .. ...+..++..
T Consensus 229 ~gr-----~G~---~~~~~~~~v~pDi~t~--sK~l~gG~~ig~~~~~~~-~~~~~~~-------~~-~~~t~~~~pl-- 287 (406)
T PRK12381 229 VGR-----TGE---LYAYMHYGVTPDVLTT--AKALGGGFPIGAMLTTEK-CASVMTV-------GT-HGTTYGGNPL-- 287 (406)
T ss_pred CCC-----Ccc---hhhhHhhCCCCCEEEe--hhhhhCCCceEEEEEcHH-HHhhcCC-------CC-CCCCCCCCHH--
Confidence 632 111 01111112 366554 488655566888776543 3221110 00 0111111111
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecC--CCeeEEEEecCCC---CHHHHHHHHHhCCce
Q 009181 393 LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGR--PDMTIVAFGSDVV---DIFEVNDIMSSKGWH 466 (541)
Q Consensus 393 ~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~f~~~~~---~~~~l~~~l~~~G~~ 466 (541)
..+++.++++.+. -.+..++..++.+++.+.|+++ ..+.++.. ....++.+...+. ....+.+.+.++|+.
T Consensus 288 ~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~ 364 (406)
T PRK12381 288 ASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVM 364 (406)
T ss_pred HHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcE
Confidence 1234444444443 2356778888888888888775 12222222 2244555655431 346788899999987
Q ss_pred eccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHcC
Q 009181 467 LNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQN 505 (541)
Q Consensus 467 ~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~~ 505 (541)
+...+ ++.+|++++..++ +++++++++|+++++++.++
T Consensus 365 v~~~g-~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~~ 403 (406)
T PRK12381 365 VLIAG-PNVVRFAPALNISEEEITTGLDRFARACERFVSR 403 (406)
T ss_pred EeeCC-CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 75433 4689999987444 99999999999999887654
No 292
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.72 E-value=2.1e-15 Score=159.17 Aligned_cols=302 Identities=16% Similarity=0.117 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC-CCCCeEEecCCccchHHH-HHhhcC-
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG-ITRPEMIIPVSAHSAYDK-AAQYFN- 247 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G-i~~~~vi~~~~~h~s~~k-a~~~~G- 247 (541)
+.+.++.+.+++++....+. + .|+++|+||+..|++.+|.+...+ | ..+.+|+.-..+|..... +....+
T Consensus 85 ~~~~~la~~l~~~~p~~~~~----v--~f~~sGseA~e~A~klar~~~~~~-~~~~r~~ii~~~~~yHG~t~~~ls~~~~ 157 (423)
T PRK05964 85 EPAERLAQRLVALTPGGLDH----V--FFSDSGSVAVEVALKMALQYWRNR-GEPGRSRFLSLRGGYHGDTIGTMSVGDR 157 (423)
T ss_pred HHHHHHHHHHHHhCCCCCCE----E--EEeCCcHHHHHHHHHHHHHHHHhc-CCCCCcEEEEEcCCcCCccHHHHhcCCC
Confidence 34455777788876422222 5 899999999999999999764332 2 124678776666555332 222211
Q ss_pred -----------CeEEEeeCCCC--CccCHHHHHHhhc---cCceEEEeec-CCCCCccccC----HHHHHHHHHHcCCEE
Q 009181 248 -----------IKLWRVPVDKE--FRADVKAIKKYIN---RNTVLIVGSA-PGFPHGIIDP----IQELGELALSHGTCL 306 (541)
Q Consensus 248 -----------~~v~~v~~~~~--~~~d~~~Le~~i~---~~t~~vv~~~-~~~~~G~id~----i~~I~~la~~~~i~l 306 (541)
..+..+|...+ ...+.+++++.+. +++.+|++.. .....|...+ +++|.++|++||+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~ll 237 (423)
T PRK05964 158 GGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLL 237 (423)
T ss_pred ccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 12334444321 1223788888885 3466777766 4666676654 899999999999999
Q ss_pred EEeCCcccchhhhhhhcCCCCCCCCcCCC--CceEEEeCCCCCCCCC-CCceEEEEecccccccccccccccCCCccCCC
Q 009181 307 HVDLCLGGFVLPFAKKLGYPIPPFDFSVQ--GVTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYVSP 383 (541)
Q Consensus 307 hvD~a~gg~~~~f~~~~g~~~p~~~~~~~--gvdsis~~~hK~~~~p-~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (541)
++|+++.|+.. .|. .+.+... .+|.++++ |++.++ ..+|+++.+ +++....... ..+ + .
T Consensus 238 I~DEv~tg~gr-----~G~---~~a~~~~~v~pDi~~~~--K~l~gG~~p~~av~~~-~~i~~~~~~~-~~~--~----~ 299 (423)
T PRK05964 238 IFDEIATGFGR-----TGT---LFACEQAGVSPDIMCLS--KGLTGGYLPLAATLCT-AEIFEAFYSD-DRA--K----A 299 (423)
T ss_pred EEechhhCCCc-----Ccc---hhHHHhcCCCCCeeeee--hhhhcCcccceEEEEc-HHHHHhhhcC-Ccc--c----c
Confidence 99999977632 111 0111112 24766654 987666 568875554 4443321100 000 0 0
Q ss_pred cccCCCCCch---HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEec--CCCeeEEEEecCCCC----HH
Q 009181 384 TVAGSRPGGL---IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIG--RPDMTIVAFGSDVVD----IF 454 (541)
Q Consensus 384 ~~~gsr~~~~---~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~f~~~~~~----~~ 454 (541)
...++..+.. .++..++++.+.. .+..++..++.+++++.|+++.++..+. .....++.+.+.+.+ ..
T Consensus 300 ~~~~~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~ 376 (423)
T PRK05964 300 FMHSPSYTANPLACAAANASLDLFED---EPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGP 376 (423)
T ss_pred cccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcchhHHH
Confidence 1112222222 2334444444433 3466777788888888887653332222 123455566554432 56
Q ss_pred HHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 455 EVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 455 ~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
++.+.|.++|+.+...+ +.+|++++..++ +|+|++++.++++++++
T Consensus 377 ~l~~~l~~~Gv~v~~~~--~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 377 ALRAFALERGVLLRPLG--NTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHCCeEEEecC--CEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 78889999998876543 589999987766 99999999999998764
No 293
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.72 E-value=5.9e-15 Score=154.91 Aligned_cols=291 Identities=19% Similarity=0.177 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCC--CCeEEecCCccc-hHHHHHhhcC-
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGIT--RPEMIIPVSAHS-AYDKAAQYFN- 247 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~--~~~vi~~~~~h~-s~~ka~~~~G- 247 (541)
...++.+.+++++|.+ . + .++++|++|+..|++++|.+..+++|+. ++.|+.....|. +...+....|
T Consensus 80 ~~~~l~~~l~~~~~~~--~----~--~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~ 151 (401)
T TIGR01885 80 VFGEFAEYVTKLFGYD--K----V--LPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTD 151 (401)
T ss_pred HHHHHHHHHHhhcCCC--E----E--EEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCC
Confidence 3445666888888753 2 3 8999999999999999987644333332 456777777644 4444444432
Q ss_pred -----------CeEEEeeCCCCCccCHHHHHHhhc---cCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEe
Q 009181 248 -----------IKLWRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVD 309 (541)
Q Consensus 248 -----------~~v~~v~~~~~~~~d~~~Le~~i~---~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD 309 (541)
..+..+|.+ |+++++++++ ++..+|++..+.+++|.+.| +++|.++|++||+++++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~D 226 (401)
T TIGR01885 152 PDSRTNFGPYVPGFKKIPYN-----NLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIAD 226 (401)
T ss_pred cccccccCCCCCCceEeCCC-----CHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 123444443 7899999886 45778889999999999887 999999999999999999
Q ss_pred CCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCC-CCceEEEEecccccccccccccccCCCccCCCcccCC
Q 009181 310 LCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGS 388 (541)
Q Consensus 310 ~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p-~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs 388 (541)
++|.|+.. .|... .++......|+++++ |.+.++ ..+|+++.+ +++...... .. ...+..+.
T Consensus 227 Ev~~g~g~-----~G~~~-~~~~~~~~~di~~~g--K~l~~g~~~ig~v~~~-~~i~~~~~~-------~~-~~~t~~~~ 289 (401)
T TIGR01885 227 EIQTGLGR-----TGKLL-CVDHENVKPDIVLLG--KALSGGVYPVSAVLAD-DDVMLTIKP-------GE-HGSTYGGN 289 (401)
T ss_pred chhhCCCc-----cchhh-HHhhcCCCCCEEEee--ccccCCCCCcEEEEEc-HHHHhhccC-------CC-CCCCCCCC
Confidence 99866432 11100 011112235777665 875433 346766654 444332110 00 01111222
Q ss_pred CCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEec--CCCeeEEEEecCCC----CHHHHHHHHHh
Q 009181 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIG--RPDMTIVAFGSDVV----DIFEVNDIMSS 462 (541)
Q Consensus 389 r~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~f~~~~~----~~~~l~~~l~~ 462 (541)
. ...+++.++++.+..+ +..++..++++++++.|++++ ..++. .+...++.+.+... +..++.+.|.+
T Consensus 290 p--~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~l~-~~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~ 363 (401)
T TIGR01885 290 P--LACAVAVAALEVLEEE---KLAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKE 363 (401)
T ss_pred H--HHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcc-CCceeEEeecCeeEEEEeccCcchhHHHHHHHHHHh
Confidence 1 1133455566555433 344677777899999999873 22222 22344444433322 46788999999
Q ss_pred CCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHH
Q 009181 463 KGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESV 499 (541)
Q Consensus 463 ~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~ 499 (541)
+|+.+...+ ++.+|++++...+ +++++++++|++++
T Consensus 364 ~Gv~v~~~~-~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 364 KGLLAKPTH-GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred CCEEEEecC-CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 998775433 4689999875555 99999999998875
No 294
>PLN02624 ornithine-delta-aminotransferase
Probab=99.72 E-value=9.6e-15 Score=155.76 Aligned_cols=289 Identities=18% Similarity=0.182 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCC--CCeEEecCCccchH-HHHHhhcC--
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGIT--RPEMIIPVSAHSAY-DKAAQYFN-- 247 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~--~~~vi~~~~~h~s~-~ka~~~~G-- 247 (541)
..++.+.++++++.+ . + .++++|++|+..|++.+|.+...++|+. +..|+....+|... ..+....+
T Consensus 119 ~~~la~~L~~~~~~~--~----~--~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~ 190 (474)
T PLN02624 119 FPEFAEYLTSMFGYD--M----V--LPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDN 190 (474)
T ss_pred HHHHHHHHHhhcCCC--e----E--EEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCc
Confidence 344666777777653 2 4 8899999999999999997644444432 23565555444433 22222211
Q ss_pred ----------CeEEEeeCCCCCccCHHHHHHhhc---cCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEeC
Q 009181 248 ----------IKLWRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDL 310 (541)
Q Consensus 248 ----------~~v~~v~~~~~~~~d~~~Le~~i~---~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD~ 310 (541)
..+..+|.+ |++.+++.++ +++.+|++..+++++|.+.| +++|.++|++||+++++|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DE 265 (474)
T PLN02624 191 EATRGFGPLLPGHLKVDFG-----DLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADE 265 (474)
T ss_pred cccccCCCCCCCceEeCCC-----CHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 123344433 7899999886 45789999999999999877 9999999999999999999
Q ss_pred CcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCC-CCceEEEEecccccccccccccccCCCccCCCcccCCC
Q 009181 311 CLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSR 389 (541)
Q Consensus 311 a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p-~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr 389 (541)
+|.|+.. .|... .++.....+|+++++ |.+.++ ..+|+++.++ ++..... +. ..++.
T Consensus 266 v~tG~Gr-----tG~~~-a~~~~~i~pDiv~ls--K~lggG~~pigav~~~~-~i~~~~~---~~----------~~~~T 323 (474)
T PLN02624 266 IQTGLAR-----TGKML-ACDWEEVRPDVVILG--KALGGGVIPVSAVLADK-DVMLCIK---PG----------EHGST 323 (474)
T ss_pred cccCcCc-----Ccchh-hHHhcCCCCCEEEec--ccccCCCCcceeeeecH-HHHhHhc---cC----------CcCCC
Confidence 9987532 12100 111112234777764 875444 4578766654 3322110 00 01111
Q ss_pred CCch---HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC----CC-eEEecCCCeeEEEEecCC-----CCHHHH
Q 009181 390 PGGL---IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI----PE-LFIIGRPDMTIVAFGSDV-----VDIFEV 456 (541)
Q Consensus 390 ~~~~---~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~----~~-~~v~~~~~~~~v~f~~~~-----~~~~~l 456 (541)
.+.. .++.-++++.+..+ +..++..++.+++++.|+++ +. +.-+ .+...++.+.+.. ....++
T Consensus 324 ~~g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~v-rg~G~~~~i~l~~~~~~~~~a~~~ 399 (474)
T PLN02624 324 FGGNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQKQFPKLIKEV-RGRGLLNAVVLNSPKLGPVSAYDV 399 (474)
T ss_pred CCCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-EeeEEEEEEEecCCCcChHHHHHH
Confidence 1111 23444445444333 34445556666666666553 32 2212 1234444443332 134678
Q ss_pred HHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 457 NDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 457 ~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
.+.|.++|+.+... .++.+||+++..++ ++++++++.|+++++.
T Consensus 400 ~~~L~e~GV~v~p~-~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 400 CLKLKERGLLAKPT-HDTIIRLAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred HHHHHhCCeEEecC-CCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 88999999877543 35789999876665 9999999999998764
No 295
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=3.2e-15 Score=146.27 Aligned_cols=320 Identities=16% Similarity=0.131 Sum_probs=228.9
Q ss_pred HHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC
Q 009181 144 HFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (541)
Q Consensus 144 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G 223 (541)
..+.+...+.++ .-..++|..|-++......+...+++++|.+.. ++.+-|-.++..++.|+.. +|
T Consensus 113 ike~a~~~lrky-GvGsCGPrGFYGt~DvHldlE~~iakF~G~E~a--------ivYs~gF~ti~S~ipafsK-----rG 178 (467)
T KOG1358|consen 113 IKEEASFTLRKY-GVGSCGPRGFYGTIDVHLDLEKRIAKFMGTEDA--------IVYSYGFSTIESAIPAFSK-----RG 178 (467)
T ss_pred HHHHHHHHHHHh-CCCCcCCCcccccceeecccHHHHHHhhCCcce--------eeeccccchhhhcchhhhc-----cC
Confidence 344455555655 334588888999988888889999999999865 5777778888888888864 77
Q ss_pred CCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCc-------------eEEEeecCCCCCcccc
Q 009181 224 ITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNT-------------VLIVGSAPGFPHGIID 290 (541)
Q Consensus 224 i~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t-------------~~vv~~~~~~~~G~id 290 (541)
|.+++.+..++++.+..+...-.+.+...+ |.+++|+.+.+++ +++++..-.-++|.+.
T Consensus 179 ---DIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~ 250 (467)
T KOG1358|consen 179 ---DIIFVDEAVNFAIQKGLQLSRSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDIC 250 (467)
T ss_pred ---cEEEEehhhhHHHHHHHhhhhheeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCccc
Confidence 999999999999999999999999888876 8888888775433 5788888888999999
Q ss_pred CHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCC-CCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEeccccccccc
Q 009181 291 PIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYP-IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQF 369 (541)
Q Consensus 291 ~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~-~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~ 369 (541)
|+++|.++..||...+++|+.+..+.+ .+.|.. ...+......+|.++++..-.+ ...|.+.+.+.-...+|.
T Consensus 251 pl~~iv~lk~Kyk~RvildEs~SfG~l---g~~GrGvteH~~v~~~~iDiv~~sm~~al---as~GgFc~G~~~i~~hQr 324 (467)
T KOG1358|consen 251 PLPEIVKLKNKYKFRVILDESLSFGVL---GKTGRGVTEHFGVPITDIDIVTASMETAL---ASGGGFCAGKSFIADHQR 324 (467)
T ss_pred ccHHHHHHHhhheEEEEEecccccccc---cccCccccccCCCCccceeeeeecccccc---cccCceeecceeeEeeee
Confidence 999999999999999999999876665 565543 2234444556788888764332 223334555555555554
Q ss_pred ccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecC
Q 009181 370 VAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSD 449 (541)
Q Consensus 370 ~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~ 449 (541)
.....|..+. +-+..+..++..++..+. .-.++.+........+.+.|+...++.+.+.+..+++...+.
T Consensus 325 LSg~~Y~fSA--------slPp~la~aa~~ai~i~~--~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~ 394 (467)
T KOG1358|consen 325 LSGSGYCFSA--------SLPPYLAGAAIKAILIEE--WNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLE 394 (467)
T ss_pred ccccceeeec--------cCchhhhhhHHHHHHHHh--hCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeec
Confidence 4333332221 122223334444544332 224467777777788888898888999999999999999876
Q ss_pred CC--C-------HHHHHHHHHhCCceec---------cCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 450 VV--D-------IFEVNDIMSSKGWHLN---------PLQRPNSIHICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 450 ~~--~-------~~~l~~~l~~~G~~~~---------~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
+. + ..++.+....+|..+. ....|..+|+|++...+ ++++++.+.|++....
T Consensus 395 ~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 395 RSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred ccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 53 1 3455555555564332 23445789999987665 9999999999988754
No 296
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.69 E-value=4.5e-15 Score=152.76 Aligned_cols=309 Identities=15% Similarity=0.091 Sum_probs=198.2
Q ss_pred cccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH
Q 009181 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka 242 (541)
|..+|...++|+ .+++++|.+. + +.|++||.|+.++..+.. ++| ++| +.+.|+....+
T Consensus 67 yag~~s~~~lE~----~va~~~G~~~------a--v~v~sGT~Al~ll~~l~l-----~pG---DeV--psn~~f~Tt~a 124 (450)
T TIGR02618 67 YAGSRNFYHLER----TVRELYGFKY------V--VPTHQGRGAENLLSQIAI-----KPG---DYV--PGNMYFTTTRY 124 (450)
T ss_pred hcCCCcHHHHHH----HHHHHHCCCe------E--EEcCCHHHHHHHHHHhCC-----CCc---CEE--CCceeHHHHHH
Confidence 556677777777 8888999874 3 899999999876532221 356 665 67888776666
Q ss_pred -HhhcCCeEEEeeCC----------CCCccCHHHHHHhhccC----ceEEEeecCCCCC-ccc---cCHHHHHHHHHHcC
Q 009181 243 -AQYFNIKLWRVPVD----------KEFRADVKAIKKYINRN----TVLIVGSAPGFPH-GII---DPIQELGELALSHG 303 (541)
Q Consensus 243 -~~~~G~~v~~v~~~----------~~~~~d~~~Le~~i~~~----t~~vv~~~~~~~~-G~i---d~i~~I~~la~~~~ 303 (541)
..+.|+..+-++.+ .+|.+|+++|+++|+++ +.+|++..++|.. |.+ +++++|.++|++||
T Consensus 125 hIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~G 204 (450)
T TIGR02618 125 HQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHG 204 (450)
T ss_pred HHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcC
Confidence 78889877777543 26899999999999863 4467777777765 677 56899999999999
Q ss_pred CEEEEeCCcccchhhhh--hhcCCC-CCCC---CcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCC
Q 009181 304 TCLHVDLCLGGFVLPFA--KKLGYP-IPPF---DFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG 377 (541)
Q Consensus 304 i~lhvD~a~gg~~~~f~--~~~g~~-~p~~---~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~ 377 (541)
++||.|+|....-.-|. ...|+. .|.. +-.....|++++++||.+.+|.| |++.++++++.........-+ +
T Consensus 205 l~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~~-e 282 (450)
T TIGR02618 205 IKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQSAKELVVVF-E 282 (450)
T ss_pred CEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHHHHHHhhhc-C
Confidence 99999999854111111 111210 1100 01123469999999999888884 456668877665433222222 2
Q ss_pred CccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC----C--
Q 009181 378 GLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV----V-- 451 (541)
Q Consensus 378 ~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~----~-- 451 (541)
|. ...|.-.+.-+.++..++...- -....++....+++|.+.|.+. |+.++.++.++.|.+.... .
T Consensus 283 G~----~tyGgla~r~~~ala~gL~e~~---~~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lph~~~ 354 (450)
T TIGR02618 283 GM----PSYGGLAGRDMEAMAIGIREAV---DYEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLPHIPQ 354 (450)
T ss_pred Cc----cccCchhhhhHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCCCCCh
Confidence 21 1112212212223333333221 2266777778899999999998 9999888888888886432 1
Q ss_pred ---CHHHHHHHHHhC-Cc---eeccC-----------CCC--CeEEEEecC--CCHHHHHHHHHHHHHHHHHHH
Q 009181 452 ---DIFEVNDIMSSK-GW---HLNPL-----------QRP--NSIHICVTL--QHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 452 ---~~~~l~~~l~~~-G~---~~~~~-----------~~~--~~iRi~~~~--~~~e~id~~i~~L~~~~~~l~ 503 (541)
....++-.|-.. |+ .+.++ ..+ ..+|++++. ++.+.+|...+.|..+.+.-.
T Consensus 355 ~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~ 428 (450)
T TIGR02618 355 DQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRD 428 (450)
T ss_pred hhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhHh
Confidence 345566555443 32 11111 111 468999875 344899999999988876543
No 297
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.67 E-value=5.9e-15 Score=139.23 Aligned_cols=328 Identities=14% Similarity=0.112 Sum_probs=209.5
Q ss_pred ceeeeecCCCCcccHHHHHH---HHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHH
Q 009181 130 CSGTVYIGGSEAEGHFSLIN---EACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTES 206 (541)
Q Consensus 130 ~~g~~y~~~~~~~~~~~~~~---~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a 206 (541)
+.+..|.+-.+ +++++. +++..+- ..+-+...--++..+.+.+.+.++++.+-++. ++.+.+-.|
T Consensus 72 FcaNnYLGLss---hPeii~a~~~aleeyG-aGlssvrfIcGtq~iHk~LE~kiAqfh~rED~--------ilypscfdA 139 (417)
T KOG1359|consen 72 FCANNYLGLSS---HPEIINAGQKALEEYG-AGLSSVRFICGTQDIHKLLESKIAQFHGREDT--------ILYPSCFDA 139 (417)
T ss_pred ecccccccccC---ChHHHHHHHHHHHHhC-CCccceeEEecchHHHHHHHHHHHHHhCCCce--------EEecccccc
Confidence 34445555555 555554 4444442 22222333356778888888899999887653 788888888
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc----CceEEEeecC
Q 009181 207 ILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR----NTVLIVGSAP 282 (541)
Q Consensus 207 ~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~----~t~~vv~~~~ 282 (541)
|.-++.+... +. +-|+..+..|.|+-...++.. ..+.+|+-+++..+.+ +-++|+-...
T Consensus 140 Nag~feail~-----pe---dAvfSDeLNhASIIdGirLck---------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~ 202 (417)
T KOG1359|consen 140 NAGAFEAILT-----PE---DAVFSDELNHASIIDGIRLCK---------RYRHVDVFDLEHCLISACKMRLKLVVTDGV 202 (417)
T ss_pred chHHHHHhcC-----hh---hhhhccccccchhhhhhHHHh---------hhccchhHHHHHHHHHhhhheEEEEEecce
Confidence 8888887743 21 567888889999877766654 2234577777766554 3456666666
Q ss_pred CCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecc
Q 009181 283 GFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNR 362 (541)
Q Consensus 283 ~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~ 362 (541)
-++.|.+.|+++|.++++|||.+|++|+|++-+++ ...|....+..--...||.+..+..|.+ ++...|+ ....+
T Consensus 203 FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~---G~tGrGt~E~~~vm~~vdiinsTLgKAl-Gga~GGy-ttgp~ 277 (417)
T KOG1359|consen 203 FSMDGDIAPLEEISQLAKKYGALLFIDECHATGFF---GETGRGTAEEFGVMGDVDIINSTLGKAL-GGASGGY-TTGPK 277 (417)
T ss_pred eccCCCcccHHHHHHHHHhcCcEEEEeecccceee---cCCCCChHHHhCCCCcceehhhhhhhhh-cCCCCCC-ccCCh
Confidence 68899999999999999999999999999987755 4555433222222345799999999985 4343453 33344
Q ss_pred cccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCee
Q 009181 363 EIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMT 442 (541)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~ 442 (541)
.+.+.......+|.......|..-|. .++++..+ + .-.+.+.+...+.+++++.++.. |+.+.+.. .+
T Consensus 278 ~li~llrqr~RpylFSnslppavV~~-----a~ka~dll--m---~s~~~i~~~~a~~qrfr~~me~a-GftIsg~~-hP 345 (417)
T KOG1359|consen 278 PLISLLRQRSRPYLFSNSLPPAVVGM-----AAKAYDLL--M---VSSKEIQSRQANTQRFREFMEAA-GFTISGAS-HP 345 (417)
T ss_pred hHHHHHHhcCCceeecCCCChhhhhh-----hHHHHHHH--H---hhHHHHHHHHHHHHHHHHHHHhc-CceecCCC-CC
Confidence 43322111112222122122222221 22333333 1 22456777778888999998875 99988753 23
Q ss_pred EEEEecCCC-CHHHHHHHHHhCCceeccCCCC------CeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 443 IVAFGSDVV-DIFEVNDIMSSKGWHLNPLQRP------NSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 443 ~v~f~~~~~-~~~~l~~~l~~~G~~~~~~~~~------~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
+..+-.-+. -..+.++.|.++|+++-.+.+| ..+|+.++..|+ ||||++++++.++.+.++
T Consensus 346 I~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 346 ICPVMLGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred ccceecccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 333333222 3567889999999887665444 467887777676 999999999999987654
No 298
>PRK05965 hypothetical protein; Provisional
Probab=99.67 E-value=5.2e-14 Score=149.42 Aligned_cols=313 Identities=16% Similarity=0.147 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccchHH-HHHhhcCC
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYD-KAAQYFNI 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s~~-ka~~~~G~ 248 (541)
+...++.+.+++++..+.+. + .|+++||||+..|++.+|.+... +|. .+.+|+.-..+|.... .+....|.
T Consensus 90 ~~~~~lae~L~~~~p~~~~~----v--~f~~sGSEAve~AlKlAr~~~~~-~g~~~r~kii~~~~~YHG~t~~a~s~t~~ 162 (459)
T PRK05965 90 EPAIRLAAKLAERAPGSLNH----V--YFTLGGSDAVDSAVRFIRHYWNA-TGRPSKKQFISLERGYHGSSSVGAGLTAL 162 (459)
T ss_pred HHHHHHHHHHHhhCCCCcCE----E--EEeCChhHHHHHHHHHHHHHHHh-cCCCCccEEEEecCCcCcccHHHHHhcCC
Confidence 33445667777776433222 4 89999999999999999986533 232 2466776666654432 22222221
Q ss_pred ------------eEEEeeCCCCCc----cC--------HHHHHHhhc----cCceEEEeecCCCCCccccC----HHHHH
Q 009181 249 ------------KLWRVPVDKEFR----AD--------VKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELG 296 (541)
Q Consensus 249 ------------~v~~v~~~~~~~----~d--------~~~Le~~i~----~~t~~vv~~~~~~~~G~id~----i~~I~ 296 (541)
.+..+|....++ -| ++++++.+. +++.+|++.......|.+.+ +++|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr 242 (459)
T PRK05965 163 PAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMR 242 (459)
T ss_pred chhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHH
Confidence 123343321111 12 357788775 45788888888777787654 88999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCC-CceEEEEeccccccccccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVT 373 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~ 373 (541)
++|++||+.||+|+++.||-. .|. .+.+...|+ |++++. |.+.+++ ..|+++.+++ +..... ...
T Consensus 243 ~lc~~~gillI~DEV~tGfGR-----tG~---~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~-i~~~~~-~~~ 310 (459)
T PRK05965 243 EACRELGILFVADEVITGFGR-----TGP---LFACEAEGVVPDLMTVA--KGLTSGYVPMGAVLMSDH-VYQGIA-DGA 310 (459)
T ss_pred HHHHHcCCEEEEechhccCcc-----Cch---hhhHhhcCCCCCeEEec--hhhccCCcceeEEEEcHH-HHHHHh-ccc
Confidence 999999999999999988743 121 122223343 888875 8766553 6787777654 221110 000
Q ss_pred ccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC--CeeEEEEecCC-
Q 009181 374 EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP--DMTIVAFGSDV- 450 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~f~~~~- 450 (541)
... .....++..++..+++.+++..+..-.-++..++..++.++|.+.|+++....++++. ...++.+.+..
T Consensus 311 ~~~-----~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~ 385 (459)
T PRK05965 311 GAA-----APVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVAD 385 (459)
T ss_pred ccc-----ccccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEecc
Confidence 000 0011222222223344444444332222356677778888888888775322222221 23333443311
Q ss_pred C------C-----HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHcCCCC
Q 009181 451 V------D-----IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQNPGP 508 (541)
Q Consensus 451 ~------~-----~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~~~~~ 508 (541)
. + ...+.+.+.++|..+...+ ++.+|++++...+ +|++++++.|.++++++.++|+.
T Consensus 386 ~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g-~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~~~~~ 454 (459)
T PRK05965 386 KATKTPFDAALDPADRIFDRAYANGLVFRAFG-DGVLGFAPALCCTEGEFDLIFERTRKTLDDVLADPDV 454 (459)
T ss_pred ccccCCCCchhHHHHHHHHHHHhCCeEEEecC-CcEEEEECCCcCCHHHHHHHHHHHHHHHHHHhcCcch
Confidence 0 1 3457778889998776543 3579998876555 99999999999999999888764
No 299
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.67 E-value=3.8e-14 Score=150.09 Aligned_cols=295 Identities=17% Similarity=0.159 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH-HHHHhhcCC-
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY-DKAAQYFNI- 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~-~ka~~~~G~- 248 (541)
....++.+.+++++..+... + .|+++||||+..|++.+|.+... +| +..|+....+|... ..+....|-
T Consensus 124 ~~~~~lae~L~~~~p~~~~~----v--~f~~SGsEAve~AlklAr~~t~~-~g--r~~ii~~~~~yHG~t~~~ls~~~~~ 194 (459)
T PRK11522 124 PLRAMLAKTLAALTPGKLKY----S--FFCNSGTESVEAALKLAKAYQSP-RG--KFTFIATSGAFHGKSLGALSATAKS 194 (459)
T ss_pred HHHHHHHHHHHHhCCCCCCE----E--EEeCCchHHHHHHHHHHHHHhcc-CC--CcEEEEecCCCCCCcHHHhhhcCCc
Confidence 34445666777776433332 4 89999999999999999976432 22 35677776655443 333333221
Q ss_pred -----------eEEEeeCCCCCccCHHHHHHhhc------cCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEE
Q 009181 249 -----------KLWRVPVDKEFRADVKAIKKYIN------RNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLH 307 (541)
Q Consensus 249 -----------~v~~v~~~~~~~~d~~~Le~~i~------~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lh 307 (541)
.+..+|.+ |.++++++++ +++.+|++.......|.+.| ++++.++|++||+.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI 269 (459)
T PRK11522 195 TFRKPFMPLLPGFRHVPFG-----NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLI 269 (459)
T ss_pred ccccCCCCCCCCCcccCCC-----CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 12233332 6788888885 34678888888888888877 9999999999999999
Q ss_pred EeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCC-CCceEEEEecccccccccccccccCCCccCCCc
Q 009181 308 VDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPT 384 (541)
Q Consensus 308 vD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p-~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (541)
+|+++.||-. .|. -+.+...|+ |++++ -|.+.++ ..+|+++.+++ +... +... +.
T Consensus 270 ~DEV~tG~GR-----tG~---~~a~e~~gv~PDivt~--gK~lggG~~Pigav~~~~~-i~~~-~~~~----------~~ 327 (459)
T PRK11522 270 LDEVQTGMGR-----TGK---MFACEHENVQPDILCL--AKALGGGVMPIGATIATEE-VFSV-LFDN----------PF 327 (459)
T ss_pred eccceecCCc-----cch---hhhhhccCCCCCEEEe--chhhhCCCccceeEEEcHH-HHHH-hccC----------Cc
Confidence 9999976532 221 112222333 77765 4876554 35777777643 3221 1000 11
Q ss_pred ccCCCCCch---HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCC-CeE-EecC--CCeeEEEEecCCC-CHHHH
Q 009181 385 VAGSRPGGL---IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIP-ELF-IIGR--PDMTIVAFGSDVV-DIFEV 456 (541)
Q Consensus 385 ~~gsr~~~~---~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~-v~~~--~~~~~v~f~~~~~-~~~~l 456 (541)
..++.+++. .++..++++.+..+ +..++..++.++|++.|+++. .+. +++. ....++.+.+.+. ....+
T Consensus 328 ~~~~T~~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~~~~~~i 404 (459)
T PRK11522 328 LHTTTFGGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNF 404 (459)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCchHHHHH
Confidence 122222222 23455555555443 466788888888888887641 121 1211 2345556655432 35678
Q ss_pred HHHHHhCCceeccCC-CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 457 NDIMSSKGWHLNPLQ-RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 457 ~~~l~~~G~~~~~~~-~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
.+.|.++|+.+.... ..+.+|++++...+ +|+|++++.|.++++++.+
T Consensus 405 ~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 405 ASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred HHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 889999998775432 34689999987666 9999999999999987764
No 300
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.67 E-value=1.3e-13 Score=142.27 Aligned_cols=294 Identities=22% Similarity=0.219 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCc-cchHHHHHhhcCC---
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSA-HSAYDKAAQYFNI--- 248 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~-h~s~~ka~~~~G~--- 248 (541)
..++.+.+.+++..+... .+ .++++||+|+..|++.+|.+..+ +.||.-..+ |-....++.+.|-
T Consensus 101 ~v~~ae~L~~~~p~~~~~---~~--~f~~sGaeA~E~AiKiAr~~Tgr------~~viaf~~afHG~T~galslT~~~~~ 169 (447)
T COG0160 101 YVELAEKLTALAPGSGLK---KV--FFGNSGAEAVEAAIKIARAYTGR------PGVIAFDGAFHGRTLGALSLTGSKPP 169 (447)
T ss_pred HHHHHHHHHHhCCcccCC---eE--EecCCcHHHHHHHHHHHHHHhCC------CcEEEECCcccccchhhHHhccCccc
Confidence 334555666666553222 14 89999999999999999976432 457666655 4444444444321
Q ss_pred ----------eEEEeeCCCCCc------------cCHHHHHHhhc------cCceEEEeecCCCCCccccC----HHHHH
Q 009181 249 ----------KLWRVPVDKEFR------------ADVKAIKKYIN------RNTVLIVGSAPGFPHGIIDP----IQELG 296 (541)
Q Consensus 249 ----------~v~~v~~~~~~~------------~d~~~Le~~i~------~~t~~vv~~~~~~~~G~id~----i~~I~ 296 (541)
.+.++|....++ -..+.+++++. +++.++++......-|.+.| ++++.
T Consensus 170 ~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~ 249 (447)
T COG0160 170 YKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALR 249 (447)
T ss_pred cccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHH
Confidence 477787754222 23444555453 24789999999998998876 88999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEecccccccccccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTE 374 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~ 374 (541)
++|++||+++++|+++.||.. .|. -|.+...|| |+++++ |.+.++...|.++.|.+ +..
T Consensus 250 ~~~~~~gillI~DEVQtG~GR-----TG~---~fa~E~~gv~PDivt~a--K~ig~G~Pl~avv~r~e-i~~-------- 310 (447)
T COG0160 250 KLCREHGILLIADEVQTGFGR-----TGK---MFAFEHFGVEPDIVTLA--KSLGGGLPLSAVVGRAE-IMD-------- 310 (447)
T ss_pred HHHHHcCCEEEEeccccCCCc-----ccc---chhhhhcCCCCCEEEec--ccccCCCceeEEeccHH-hcc--------
Confidence 999999999999999988843 443 355566665 998887 88777777887777654 221
Q ss_pred cCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecCCC--eeEEEEecC--
Q 009181 375 WSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGRPD--MTIVAFGSD-- 449 (541)
Q Consensus 375 ~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~~--~~~v~f~~~-- 449 (541)
|..+.. .++ +++...++-+++..+..-.-+++.++..++.++|++.|.++ ....++++.. ..++.+.+.
T Consensus 311 ~~~g~~-----~~T-f~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d 384 (447)
T COG0160 311 WPPGGH-----GGT-FGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKD 384 (447)
T ss_pred cCCccc-----CCC-CCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecC
Confidence 322211 112 33334455555544443333478888888999999999874 3445666543 233333322
Q ss_pred C----CC---HHHHHHHHHhCCceeccCC-CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 450 V----VD---IFEVNDIMSSKGWHLNPLQ-RPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 450 ~----~~---~~~l~~~l~~~G~~~~~~~-~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
. .+ ...+.+.+.++|..+...+ ..+.+||.++..-+ +++|++++.|.++++++
T Consensus 385 ~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 385 RDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 1 22 4678899999998776665 45899998876544 99999999999998764
No 301
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.66 E-value=7e-14 Score=147.12 Aligned_cols=288 Identities=18% Similarity=0.161 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhcC---
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFN--- 247 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~G--- 247 (541)
...++.+.+++++..+... + .|+++||||+..|++.+|.+..+ +| +++|+....+|.. ...+....+
T Consensus 118 ~~~~lAe~L~~~~p~~~~~----v--~f~~SGsEA~e~AlklAr~~t~~-~g--r~~ii~~~~~yHG~t~~~ls~t~~~~ 188 (442)
T TIGR03372 118 LRALLAKTLAALTPGKLKY----S--FFCNSGTESVEAALKLAKAYQSP-RG--KFTFIAASGAFHGKSLGALSATAKPA 188 (442)
T ss_pred HHHHHHHHHHHhCCCCcCE----E--EEeCCchHHHHHHHHHHHHHHhh-cC--CcEEEEECCCccCCCHHHhhccCCcc
Confidence 3455677788876543332 4 89999999999999999976432 23 3567777665444 333332222
Q ss_pred ---------CeEEEeeCCCCCccCHHHHHHhhc------cCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEE
Q 009181 248 ---------IKLWRVPVDKEFRADVKAIKKYIN------RNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHV 308 (541)
Q Consensus 248 ---------~~v~~v~~~~~~~~d~~~Le~~i~------~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhv 308 (541)
-.+..+|.+ |.+++++.++ +++.+|++......-|.+.| ++++.++|++||+.+++
T Consensus 189 ~~~~~~p~~~~~~~~p~~-----d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~ 263 (442)
T TIGR03372 189 FRKPFMPLLPGFHHVAFG-----DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLIL 263 (442)
T ss_pred cCCCCCCCCCCCEEeCCC-----CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 123444443 6777777764 35788888888877888877 99999999999999999
Q ss_pred eCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCC-CCceEEEEecccccccccccccccCCCccCCCcc
Q 009181 309 DLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTV 385 (541)
Q Consensus 309 D~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p-~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (541)
|+++.||-. .|. -+.+...|+ |++++ -|.+.++ ..+|+++.++ ++..... . .+..
T Consensus 264 DEV~tG~GR-----tG~---~~a~e~~gv~PDivt~--gK~lg~G~~Pigavv~~~-~i~~~~~--~---------~~~~ 321 (442)
T TIGR03372 264 DEVQTGMGR-----TGK---MFACEHEGVQPDILCL--AKALGGGVMPIGATIATE-AVFSVLF--D---------NPFL 321 (442)
T ss_pred eecccCCCc-----ccc---chhhhhcCCCCCeeee--hhhhcCCcccceEEEecH-HHHHhhh--c---------cCcc
Confidence 999976532 221 122222343 77764 4886554 3577667653 3322110 0 0111
Q ss_pred cCCCCCchHHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC----C-CeEEecCCCeeEEEEecCCC-CHHHH
Q 009181 386 AGSRPGGLIAG---AWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI----P-ELFIIGRPDMTIVAFGSDVV-DIFEV 456 (541)
Q Consensus 386 ~gsr~~~~~a~---~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~----~-~~~v~~~~~~~~v~f~~~~~-~~~~l 456 (541)
.++..++..++ ..++|+.+.++ +..++..++.++|++.|+++ | .+.-+ .....++.+.+.+. ....+
T Consensus 322 ~~~T~~gnp~~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~v-RG~Gl~~giel~~~~~~~~i 397 (442)
T TIGR03372 322 HTTTFGGNPLACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQLAAEYPDLIIEA-RGKGLLMAIEFRDNEIGYAF 397 (442)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-ecceEEEEEEeCChHHHHHH
Confidence 22223222334 44445444333 35566677777777777653 3 11111 12355666665432 34678
Q ss_pred HHHHHhCCceeccCC-CCCeEEEEecCCCH-HHHHHHHHHHHHHH
Q 009181 457 NDIMSSKGWHLNPLQ-RPNSIHICVTLQHV-AVVDVFLRDLRESV 499 (541)
Q Consensus 457 ~~~l~~~G~~~~~~~-~~~~iRi~~~~~~~-e~id~~i~~L~~~~ 499 (541)
.+.|.++|+.+...+ .++.+|++++...+ +|+|++++.|++++
T Consensus 398 ~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 398 AKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred HHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 899999998776433 24689999987666 99999999998763
No 302
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.66 E-value=6.6e-14 Score=149.71 Aligned_cols=308 Identities=16% Similarity=0.099 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHHHHhCC-CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecC-CccchHHHHHhhc
Q 009181 170 ARFEAEVIAMTAALLGN-KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPV-SAHSAYDKAAQYF 246 (541)
Q Consensus 170 ~~~e~ev~~~la~l~g~-~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~-~~h~s~~ka~~~~ 246 (541)
.+.+.++.+.+.+++.. +... + .|+++|+||+..|++++|.+... .|. .+.+||.-+ ..|.+...+....
T Consensus 132 ~~~~~~lae~L~~~~~~~~~~~----v--~f~~SGsEA~e~AlKlAr~~~~~-~g~~~r~~iI~~~~~yHG~t~~a~sls 204 (504)
T PLN02760 132 TKPSLDLAKELLEMFTARKMGK----V--FFTNSGSEANDTQVKLVWYYNNA-LGRPNKKKFIARSKSYHGSTLISASLS 204 (504)
T ss_pred cHHHHHHHHHHHhhcCCCCCCE----E--EEeCChHHHHHHHHHHHHHHHHh-cCCCCCcEEEEECCCccCChHhhhhcc
Confidence 34455566677777532 2222 4 88999999999999999875422 231 135565554 4566655454444
Q ss_pred CCe------------EEEeeCCCCCc-------------cCHHHHHHhhc----cCceEEEeecCCCCCccccC----HH
Q 009181 247 NIK------------LWRVPVDKEFR-------------ADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQ 293 (541)
Q Consensus 247 G~~------------v~~v~~~~~~~-------------~d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~----i~ 293 (541)
|.. +..++.+..++ ...+++++++. +++.+|++.......|.+.| ++
T Consensus 205 g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~ 284 (504)
T PLN02760 205 GLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFE 284 (504)
T ss_pred CChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHH
Confidence 321 22333221111 11356777764 34778888888777888887 99
Q ss_pred HHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCC-CceEEEEecccccccccc
Q 009181 294 ELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFV 370 (541)
Q Consensus 294 ~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~ 370 (541)
+|.++|++||++|++|+++.||-. .|. .+.+...| .|++++. |.+.+++ ..|+++.++ ++.....
T Consensus 285 ~lr~lc~~~g~lLI~DEV~TGfGR-----tG~---~~a~e~~gv~PDivtlg--K~lggG~~PigAv~~~~-~i~d~~~- 352 (504)
T PLN02760 285 KIQAVLKKYDILFIADEVICAFGR-----LGT---MFGCDKYNIKPDLVSLA--KALSSAYMPIGAVLVSP-EISDVIH- 352 (504)
T ss_pred HHHHHHHHcCCEEEecchhhCCcc-----cch---hhHHHhcCCCCcEEEec--ccccCCccccceEeecH-HHHhhhh-
Confidence 999999999999999999976632 111 11122223 3777764 8754442 466666654 3332111
Q ss_pred cccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEEec
Q 009181 371 AVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAFGS 448 (541)
Q Consensus 371 ~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~~ 448 (541)
...+..+ ....++.+++...++.+++..+..-.-++..++..++.++|++.|+++....++.+ ....++.+.+
T Consensus 353 -~~~~~~~----~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~ 427 (504)
T PLN02760 353 -SQSNKLG----SFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEF 427 (504)
T ss_pred -ccccccc----CcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEE
Confidence 0000000 01122222222334444444333222235678888888888888876533222221 1234445443
Q ss_pred CC-CC-----------HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 449 DV-VD-----------IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 449 ~~-~~-----------~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
.+ .+ ...+.+.+.++|+.+...+ +.+|++++..++ +|+|+++++++++++++.
T Consensus 428 ~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g--~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 428 VDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG--DNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred ecCCcccccccchhHHHHHHHHHHHhCCcEEEecC--CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 21 11 3457788899998776543 478999876665 999999999999998764
No 303
>PLN00144 acetylornithine transaminase
Probab=99.66 E-value=2.4e-13 Score=141.43 Aligned_cols=294 Identities=17% Similarity=0.119 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCC-------CCeEEecCCccch-HHHHH
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGIT-------RPEMIIPVSAHSA-YDKAA 243 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~-------~~~vi~~~~~h~s-~~ka~ 243 (541)
...++.+.++++.+. +. + .++++||||+..|++.+|.+..++...+ +++|+.-..+|.. ..-+.
T Consensus 58 ~~~~la~~l~~~~~~--~~----v--~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~ 129 (382)
T PLN00144 58 PQVELAKRLVASSFA--DR----V--FFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGAL 129 (382)
T ss_pred HHHHHHHHHHhcCCC--Ce----E--EEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHH
Confidence 344566677776543 22 5 8999999999999999997654311111 3567666655444 33333
Q ss_pred hhcCC------------eEEEeeCCCCCccCHHHHHHhhcc-CceEEEeecCCCCCcccc--C--HHHHHHHHHHcCCEE
Q 009181 244 QYFNI------------KLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIID--P--IQELGELALSHGTCL 306 (541)
Q Consensus 244 ~~~G~------------~v~~v~~~~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id--~--i~~I~~la~~~~i~l 306 (541)
...+- .+..+|.+ |++++++++.. ++.+|++...++|.|... + +++|.++|++||+++
T Consensus 130 s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~ll 204 (382)
T PLN00144 130 ALTSKEQYRTPFEPLMPGVTFVEYG-----NLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALL 204 (382)
T ss_pred hcCCCccccccCCCCCCCeEEeCCC-----CHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 32221 12334332 78999998864 577888887788855543 3 889999999999999
Q ss_pred EEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCccc
Q 009181 307 HVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVA 386 (541)
Q Consensus 307 hvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (541)
++|+++.++.. .|. ....+......|.+++ .|.+.++..+|+++.+++ +..... . .. ...+..
T Consensus 205 I~DEv~tg~gr-----~g~-~~~~~~~~~~PDi~t~--sK~l~~G~pig~v~~~~~-~~~~~~---~----~~-~~~T~~ 267 (382)
T PLN00144 205 VFDEVQCGLGR-----TGY-LWAHEAYGVEPDIMTL--AKPLAGGLPIGAVLVTEK-VASAIN---P----GD-HGSTFA 267 (382)
T ss_pred EEechhhCCCc-----cch-HhhhhhcCCCCCEEEe--cccccCCcceEEEEEcHH-HHhccC---C----CC-CCCCCC
Confidence 99999987743 111 0011111111355554 488766677898777543 322110 0 00 011111
Q ss_pred CCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh----hcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHh
Q 009181 387 GSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGI----KEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSS 462 (541)
Q Consensus 387 gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L----~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~ 462 (541)
++. ...++..++++.+....+.+ +...+.+++++.| .+.|.+.-+. ....++++.+ +.+...+.+.+.+
T Consensus 268 ~~p--l~~aaa~a~l~~i~~~~~~~---~~~~~g~~l~~~l~~~~~~~~~~~~vr-g~G~~~~l~l-~~~~~~~~~~~~~ 340 (382)
T PLN00144 268 GGP--LVCNAALAVLDKISKPGFLA---SVAKKGEYLRELLRRKLGGNPHVKEVR-GVGLLVGIQL-DVPAGPLVDACRD 340 (382)
T ss_pred CCH--HHHHHHHHHHHHHhhchHHH---HHHHHHHHHHHHHHHHHhhCCCceeee-cCceEEEEEe-cCccHHHHHHHHH
Confidence 111 11234444556665444443 3344444444444 4444332221 2455666665 3345688899999
Q ss_pred CCceeccCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Q 009181 463 KGWHLNPLQRPNSIHICVTL-QHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 463 ~G~~~~~~~~~~~iRi~~~~-~~~e~id~~i~~L~~~~~~l 502 (541)
+|+.+...+..+.+|++++. .+.++++++++.|++++.++
T Consensus 341 ~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 341 SGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred CCeEEeecCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 99877654445799999987 44599999999999998653
No 304
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.66 E-value=2.4e-14 Score=140.23 Aligned_cols=302 Identities=15% Similarity=0.111 Sum_probs=210.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcC
Q 009181 168 SVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFN 247 (541)
Q Consensus 168 ~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G 247 (541)
|..+...++.+.++++.+-+.. ++-++.--||...+..+... -+| .+|+..+..|.|....++-.+
T Consensus 213 G~s~~hv~LE~eLA~LHqK~aA--------LlFsSCfVANDstLftLak~---lpg---cei~SD~gNHASMI~GIrns~ 278 (570)
T KOG1360|consen 213 GHSKHHVRLEAELADLHQKEAA--------LLFSSCFVANDSTLFTLAKK---LPG---CEIFSDEGNHASMIQGIRNSR 278 (570)
T ss_pred CCCchhhhHHHHHHHHhcCcce--------eeeeeeeeccchHHHHHHHH---CCC---cEEeccccchHHHHHHhhhcC
Confidence 3334444566688888877643 34444555555555554332 255 789999999999999999999
Q ss_pred CeEEEeeCCCCCccCHHHHHHhhcc----CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhc
Q 009181 248 IKLWRVPVDKEFRADVKAIKKYINR----NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (541)
Q Consensus 248 ~~v~~v~~~~~~~~d~~~Le~~i~~----~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~ 323 (541)
+.-.....+ |+++|++++.+ -|++|.+...+++.|.+.||+||++++++||..-.+|++++-+++ ...
T Consensus 279 v~K~IFrHN-----D~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlY---G~r 350 (570)
T KOG1360|consen 279 VPKHIFRHN-----DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLY---GPR 350 (570)
T ss_pred CcceeeccC-----CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccc---cCC
Confidence 877777776 89999999864 489999999999999999999999999999999999999876655 223
Q ss_pred CCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHH
Q 009181 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMS 403 (541)
Q Consensus 324 g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~ 403 (541)
|..+-+-|-....+|+|+.+.-|. ||--| |+ +.....+........+.+.. ..|-+-..++++..+.+.
T Consensus 351 GaGvgerdGvm~kvDiIsGTLgKa-fGcVG-GY-IAat~~LvDmiRSyAaGFIF--------TTSLPP~vl~GAleaVr~ 419 (570)
T KOG1360|consen 351 GAGVGERDGVMHKVDIISGTLGKA-FGCVG-GY-IAATRKLVDMIRSYAAGFIF--------TTSLPPMVLAGALEAVRI 419 (570)
T ss_pred CCCccccCCcchhhhhcccchhhh-ccccc-ce-ehhhhhHHHHHHHhcCceEE--------ecCCChHHHHhHHHHHHH
Confidence 322333344455579999999998 44443 33 33333333222111111111 112233346677788888
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCC-CHHHHHHHHHh-CCceeccCCCC------Ce
Q 009181 404 LGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVV-DIFEVNDIMSS-KGWHLNPLQRP------NS 475 (541)
Q Consensus 404 lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~-~~~~l~~~l~~-~G~~~~~~~~~------~~ 475 (541)
+..+.-+...+..+.+.+|+++.|.++ |+.++..| ..++.++.-+. -..++++.|.. .|+.+.+..+| ..
T Consensus 420 lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi~~p-SHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~ 497 (570)
T KOG1360|consen 420 LKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPVIPNP-SHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTER 497 (570)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHHc-CCcccCCC-cceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCccccccee
Confidence 865544566667777889999999987 88888544 56777776554 34567776665 56777776666 46
Q ss_pred EEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 476 IHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 476 iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
+||..|..++ +-++.|+++|..+-+++.-
T Consensus 498 LRiaPTP~HT~~mm~~lv~~l~~vw~~v~l 527 (570)
T KOG1360|consen 498 LRIAPTPHHTPQMMNILVNALLDVWNEVGL 527 (570)
T ss_pred eecCCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 8999988888 7789999999998887654
No 305
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.65 E-value=7.5e-14 Score=145.25 Aligned_cols=268 Identities=16% Similarity=0.134 Sum_probs=162.1
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEec-CCccchHHHHHhhcCCeEE---------EeeCCCCCccCHHHHH
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIP-VSAHSAYDKAAQYFNIKLW---------RVPVDKEFRADVKAIK 267 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~-~~~h~s~~ka~~~~G~~v~---------~v~~~~~~~~d~~~Le 267 (541)
.++++||+|+..|++.+|.+. | +++|++. ...|.+...++...|.+.. .++.. -..|+++++
T Consensus 88 ~~~~SGseA~~~Al~~ar~~~----~--~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dl~~l~ 159 (375)
T PRK04260 88 FFCNSGAEANEAAIKIARKAT----G--KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--IFNDLNSVK 159 (375)
T ss_pred EEcCccHHHHHHHHHHHHHhc----C--CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--CCCCHHHHH
Confidence 799999999999999998642 1 2556664 5567766556544432211 11100 023899999
Q ss_pred HhhccCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeC
Q 009181 268 KYINRNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVD 343 (541)
Q Consensus 268 ~~i~~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~ 343 (541)
+++++++.+|++..+++++|.+.+ +++|.++|+++|+++++|++|.++.. .|. ...+.......|.++
T Consensus 160 ~~l~~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~-----~g~-~~~~~~~~~~pdi~t-- 231 (375)
T PRK04260 160 ALVNKNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGR-----TGK-LYAFEHYGIEPDIFT-- 231 (375)
T ss_pred HhcCCCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----ccc-hhhhHhhCCCCCEEE--
Confidence 999888999999999999999855 89999999999999999999976532 111 001111111135544
Q ss_pred CCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009181 344 VHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESI 423 (541)
Q Consensus 344 ~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l 423 (541)
+.|.+.++...|+++.+++ +...... .. ...+..++.. ..++..++++.+..+ +..++..+..+++
T Consensus 232 ~sK~l~~G~~ig~~~~~~~-~~~~~~~-------~~-~~~t~~~~~~--~~~aa~a~l~~~~~~---~~~~~~~~~~~~~ 297 (375)
T PRK04260 232 LAKGLANGVPVGAMLAKSS-LGGAFGY-------GS-HGSTFGGNKL--SMAAASATLDIMLTA---GFLEQALENGNYL 297 (375)
T ss_pred ecccccCCcceEEEEEcHH-HHhhcCC-------CC-CCCCCCcCHH--HHHHHHHHHHHHHhh---HHHHHHHHHHHHH
Confidence 5697544456888777644 2211100 00 0111111211 123444444443333 3334444444444
Q ss_pred HHHh----hcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHH
Q 009181 424 QKGI----KEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRES 498 (541)
Q Consensus 424 ~~~L----~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~ 498 (541)
++.+ .+.+.+..+. ....++++.+ ..+..++.+.+.++|+.+...+ ++.+|++++...+ +|++++++.|+++
T Consensus 298 ~~~l~~~~~~~~~~~~~~-~~g~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~-~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 298 QEQLQKALQDKETVTTVR-GLGYMIGIET-TADLSQLVEAARDKGLIVLTAG-TNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred HHHHHHHHhhCCCeeEEe-ccceEEEEEe-cCcHHHHHHHHHhCCCEEecCC-CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 4444 4443332221 2455666665 2357789999999998775443 4689999965544 9999999999875
No 306
>PRK06541 hypothetical protein; Provisional
Probab=99.65 E-value=1.3e-13 Score=146.33 Aligned_cols=303 Identities=18% Similarity=0.142 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccch-HHHHHhhcCC-
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSA-YDKAAQYFNI- 248 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s-~~ka~~~~G~- 248 (541)
...++.+.+++++..+.+. + .++++||||+..|++.+|.+... .|. .+.+|+.-..+|.. ...+....|.
T Consensus 96 ~~~~la~~l~~~~p~~~~~----v--~f~~sGseAve~AlklAr~~~~~-~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~ 168 (460)
T PRK06541 96 PAIELAERLAALAPGDLNR----V--FFTTGGSEAVESAWKLAKQYFKL-TGKPGKHKVISRAIAYHGTTQGALAITGLP 168 (460)
T ss_pred HHHHHHHHHHHhCCCCcCE----E--EEcCCcHHHHHHHHHHHHHHHHh-cCCCCccEEEEEcCcccCcchhhhcCcCCh
Confidence 3445666777776433232 5 89999999999999999976432 121 13567665555443 3333322221
Q ss_pred -----------eEEEeeCCCCCc-----cC--------HHHHHHhhc----cCceEEEeecCCCCCccccC----HHHHH
Q 009181 249 -----------KLWRVPVDKEFR-----AD--------VKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELG 296 (541)
Q Consensus 249 -----------~v~~v~~~~~~~-----~d--------~~~Le~~i~----~~t~~vv~~~~~~~~G~id~----i~~I~ 296 (541)
.+..+|....++ -+ ++.+++.++ +++.+|++....++.|.+.+ +++|.
T Consensus 169 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~ 248 (460)
T PRK06541 169 AFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVR 248 (460)
T ss_pred hhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHH
Confidence 234444332111 12 367888875 34677777777888899887 99999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCC-CceEEEEeccccccccccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVT 373 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~ 373 (541)
++|++||+++++|+++.||-. .|. .+.+...| .|.+++ .|.+.++. ..|+++.+++....... ..
T Consensus 249 ~lc~~~g~llI~DEV~tGfGR-----~G~---~~a~~~~gv~PDivt~--gK~l~~G~~pigav~~~~~i~~~~~~--~~ 316 (460)
T PRK06541 249 EICDRYDVLLVSDEVICAFGR-----LGE---MFGCERFGYVPDIITC--AKGITSGYSPLGAMIASDRLFEPFLD--GP 316 (460)
T ss_pred HHHHHcCCEEEEechhhCCCc-----Cch---hhhhhhcCCCCCEEEe--cccccCCccceeEEEEcHHHHHHhhc--CC
Confidence 999999999999999966632 111 11122223 377764 48755443 57777776553221110 00
Q ss_pred ccCCCccCCCcccCCCCCch---HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEec--CCCeeEEEEec
Q 009181 374 EWSGGLYVSPTVAGSRPGGL---IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIG--RPDMTIVAFGS 448 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~---~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~f~~ 448 (541)
.....++..+.. .++..++++.+..+ +..++..++.++|.+.|+++....++. .....++.+.+
T Consensus 317 --------~~~~~~~T~~gnp~~~aaala~l~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~ 385 (460)
T PRK06541 317 --------TMFLHGYTFGGHPVSAAVALANLDIFERE---GLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIEL 385 (460)
T ss_pred --------CccccCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEE
Confidence 011112222221 22334444444333 456788888889998888763222221 12234444443
Q ss_pred CCC--------C------H-HHHHHHHHhCCceeccCC-CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 449 DVV--------D------I-FEVNDIMSSKGWHLNPLQ-RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 449 ~~~--------~------~-~~l~~~l~~~G~~~~~~~-~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
.+. + . ..+.+.|.++|+.+.... ..+.+|++++..++ +|+|++++.|+++++++..
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 386 VKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred ecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 110 0 1 256688889998876532 23689999987666 9999999999999987654
No 307
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.64 E-value=3.3e-14 Score=142.92 Aligned_cols=281 Identities=19% Similarity=0.125 Sum_probs=190.2
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HHHH
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDKA 242 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~ka 242 (541)
|....+|. .++.+-|++.. +.+++|..|+..++..+.. .| ++|++....|.. +.+.
T Consensus 77 Pt~~~le~----~iaal~ga~~~--------l~fsSGmaA~~~al~~L~~-----~g---~~iV~~~~~Y~gT~~~l~~~ 136 (409)
T KOG0053|consen 77 PTRDVLES----GIAALEGAAHA--------LLFSSGMAAITVALLHLLP-----AG---DHIVATGDVYGGTLRILRKF 136 (409)
T ss_pred CchHHHHH----HHHHHhCCceE--------EEecccHHHHHHHHHHhcC-----CC---CcEEEeCCCcccHHHHHHHH
Confidence 44444444 78888887642 6788888899999988763 55 789988877766 4455
Q ss_pred HhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 243 AQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 243 ~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
...+|++...+.++ |+++++++++++|.+|.+..|+||+..+-||++|+++||++|+.++||..+|+++.
T Consensus 137 ~~~~gie~~~vd~~-----~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~----- 206 (409)
T KOG0053|consen 137 LPKFGGEGDFVDVD-----DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYN----- 206 (409)
T ss_pred HHHhCceeeeechh-----hHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccc-----
Confidence 56779999999887 89999999999999999999999999999999999999999999999999987643
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCC--ceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHH
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~a 400 (541)
.+....|+|+++-|..||..|-.. .|++..+..++.+..+... ... |.-.. ...+|..
T Consensus 207 -------~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~-~~l----------g~~~~--p~~~~ll 266 (409)
T KOG0053|consen 207 -------QDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ-EDL----------GWCED--PFDLFLL 266 (409)
T ss_pred -------cChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHH-HHh----------cCCCC--HHHHHHH
Confidence 344567899999999999655444 4554444344333222111 111 11112 2256665
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEe-cC-----CC-----------eeEEEEecCCC--CHHHHHHHHH
Q 009181 401 LMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFII-GR-----PD-----------MTIVAFGSDVV--DIFEVNDIMS 461 (541)
Q Consensus 401 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~-----~~-----------~~~v~f~~~~~--~~~~l~~~l~ 461 (541)
.+ |...+.-++++..+++..+++.|.+.|.++-+ .| |+ .+.++|..... ...++.+.|+
T Consensus 267 ~R--glktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~~LK 344 (409)
T KOG0053|consen 267 SR--GLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYDALK 344 (409)
T ss_pred hc--CcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCHHHHHHHHHhhh
Confidence 53 44555566777777777788888887777633 22 11 23344433221 2333443332
Q ss_pred h------CCc---------eec---------cCC-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 462 S------KGW---------HLN---------PLQ-RPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 462 ~------~G~---------~~~---------~~~-~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
= -|- ... ..+ .++-+|+|++. |++|.+++++.++++.+
T Consensus 345 ~~~~a~SlG~~eSL~~~p~~mth~~~~e~~~~~Gi~~~LVRvSVGi---Ed~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 345 LFTKAPSLGGNESLAEPPAIMTHASELEEREKFGIDPNLVRVSVGI---EDIEDLIKDFQQALEKA 407 (409)
T ss_pred hhhcccCcCccchhhcchhhhccCCCHHHHHhcCCCCCcEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 1 120 010 011 13679999997 77888899999888764
No 308
>PRK07482 hypothetical protein; Provisional
Probab=99.64 E-value=1.4e-13 Score=146.33 Aligned_cols=308 Identities=14% Similarity=0.068 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccchHH-HHHhhcC
Q 009181 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYD-KAAQYFN 247 (541)
Q Consensus 170 ~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s~~-ka~~~~G 247 (541)
.+...++.+.+++++..+.+. + .|+++||||+..|++.+|.+... +|. .+.+|+.-..+|.... -+....|
T Consensus 93 ~~~~~~lAe~L~~~~p~~~~~----v--~f~~sGSEAve~AlKlAr~~~~~-~g~~~r~~Ii~~~~~YHG~t~ga~s~~~ 165 (461)
T PRK07482 93 TEASITLSKRIIDRAPAGMSK----V--YYGLSGSDANETQIKLVWYYNNV-LGRPEKKKIISRWRGYHGSGVVTGSLTG 165 (461)
T ss_pred CHHHHHHHHHHHHhCCCCcCE----E--EEeCchHHHHHHHHHHHHHHHHh-cCCCCCceEEEecCccCCccHhhhhccC
Confidence 344556777888877433232 4 89999999999999999976432 232 1467777665544432 2222111
Q ss_pred ------------CeEEEeeCCCCCc-------------cCHHHHHHhhc----cCceEEEeecCCCCCccccC----HHH
Q 009181 248 ------------IKLWRVPVDKEFR-------------ADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQE 294 (541)
Q Consensus 248 ------------~~v~~v~~~~~~~-------------~d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~----i~~ 294 (541)
-.+..++....++ -+.+++++.+. +++.+|++.......|.+.+ +++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~ 245 (461)
T PRK07482 166 LSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPA 245 (461)
T ss_pred CchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHH
Confidence 1233343321111 14678888884 45788888887776777754 889
Q ss_pred HHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCC-CceEEEEeccccccccccc
Q 009181 295 LGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVA 371 (541)
Q Consensus 295 I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~ 371 (541)
|.++|++||++|++|+++.||-. .|. .+.+...|| |.+++. |.+.+++ ..|+++.+++ +.... ..
T Consensus 246 lr~lc~~~giLlI~DEV~tGfGR-----tG~---~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~-i~~~~-~~ 313 (461)
T PRK07482 246 IQAVLKKYDILLIADEVVTGFGR-----LGS---MFGSDHYGIEPDLITVA--KGLTSAYAPLSGSIVGEK-VWDVL-EQ 313 (461)
T ss_pred HHHHHHHhCCEEEEeccccCCCc-----Ccc---hhhHHhcCCCCCEEEEc--cccccCccccceeeecHH-HHHHH-hc
Confidence 99999999999999999988743 121 122233344 888875 8765554 5676677654 21110 00
Q ss_pred ccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC----CCe-EEecCCCeeEEEE
Q 009181 372 VTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI----PEL-FIIGRPDMTIVAF 446 (541)
Q Consensus 372 ~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~----~~~-~v~~~~~~~~v~f 446 (541)
.....+ ....++..++..+++-+++..+..-.-.+..++..++.++|.+.|+++ |-+ ++-+ ...++.+
T Consensus 314 ~~~~~~-----~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG--~Glm~gi 386 (461)
T PRK07482 314 GSDEHG-----AIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRG--VGMLAAV 386 (461)
T ss_pred ccccCC-----ccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEee--ceeEEEE
Confidence 000011 111233333333344444444332222345666677777777777643 322 1222 2334444
Q ss_pred ecCC--C-----C-----HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 447 GSDV--V-----D-----IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 447 ~~~~--~-----~-----~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
.+.. . + ...+...+.++|+.+......+.+|+.++...+ +|++++++.++++++++.
T Consensus 387 el~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 456 (461)
T PRK07482 387 EFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDEVL 456 (461)
T ss_pred EeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3321 0 1 246778889999776433234689998776555 999999999999998764
No 309
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.64 E-value=9.8e-14 Score=141.00 Aligned_cols=301 Identities=12% Similarity=0.021 Sum_probs=205.1
Q ss_pred chHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEE-ecCCccch--HHHH
Q 009181 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMI-IPVSAHSA--YDKA 242 (541)
Q Consensus 166 ~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi-~~~~~h~s--~~ka 242 (541)
++...++..++.+.++++++.|++. ++ -+++.|||.+..++.+-+.. +| ++++ +..+.+++ +.+.
T Consensus 44 s~~F~~i~~~~~~~Lr~Ll~~P~~y---~V-lfl~GggT~~~ea~~~Nll~-----~g---~~~~~~~~tG~fg~r~~~e 111 (364)
T PRK12462 44 SSWFSSLLAQAEADLRDLLGIPDEY---GV-VFLQGGSSLQFSMIPMNFSR-----PG---AAAPEYVTTGYWSRKAIGE 111 (364)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCC---eE-EEEeccHHHHHHHHHHHcCC-----CC---CcEEEEEeCCHHHHHHHHH
Confidence 5778888999999999999997654 24 35566699999988887753 44 5444 44456655 5566
Q ss_pred HhhcCCeEEEeeCCC----CCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhh
Q 009181 243 AQYFNIKLWRVPVDK----EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLP 318 (541)
Q Consensus 243 ~~~~G~~v~~v~~~~----~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~ 318 (541)
++.+| ++..+...+ +...+++++ .++++...|.+++-.|.+|+..| ++.+.++.+++||+..+-+..
T Consensus 112 a~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~- 182 (364)
T PRK12462 112 ASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSR- 182 (364)
T ss_pred HHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCC-
Confidence 66667 555554211 234566665 34557788999999999999886 333346899999999653322
Q ss_pred hhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEeccccccccc--ccccccCCCccCCCcccCCCCCchHHH
Q 009181 319 FAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQF--VAVTEWSGGLYVSPTVAGSRPGGLIAG 396 (541)
Q Consensus 319 f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~gsr~~~~~a~ 396 (541)
++++..+ |.+..+.+|.+ +|.|.++++++++.+.+... ...-+|..-. .......+.+-..+..
T Consensus 183 ----------pid~~~~--dvi~agsQKnl-gP~Gltvvivs~~al~~~~~~~p~~ldy~~~~-~~~s~~nTPpv~~iy~ 248 (364)
T PRK12462 183 ----------PFDVEAY--GMVYAHAQKNL-GPAGVTVAIIRRALLERVPDTLPPMLDFRTHV-EHRSNYNTPPVFAIYV 248 (364)
T ss_pred ----------CCChHHc--cEEEeeccccC-CCCceEEEEECHHHHhhccccCCchhhHHHHH-hcCCCCCCchHHHHHH
Confidence 4555544 99999999995 59999998888776533221 1111110000 0111222444455777
Q ss_pred HHHHHHHHhHH--HHHHHHHHHHHHHHHHHHHhhcCCCeEEec-C---CCeeEEEEecCCC-CHHHHHHHHHhCCce-ec
Q 009181 397 AWAALMSLGQE--GYLENTKAIMEVSESIQKGIKEIPELFIIG-R---PDMTIVAFGSDVV-DIFEVNDIMSSKGWH-LN 468 (541)
Q Consensus 397 ~~~al~~lg~~--g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~---~~~~~v~f~~~~~-~~~~l~~~l~~~G~~-~~ 468 (541)
+-.+++.+-.+ |++.+.++..+.++.+++.|.+.+++.... . .....|+|+..+. -..++.+.+.++|.. +.
T Consensus 249 l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~~l~~~f~~~a~~~gl~~lk 328 (364)
T PRK12462 249 MALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQPRLDTLFKEQSTEAGFCGLS 328 (364)
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCHHHHHHHHHHHHHCCCcccc
Confidence 78888888777 999999999999999999999997666432 2 2357788887654 345777888889965 34
Q ss_pred cCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 469 PLQRPNSIHICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 469 ~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
....-+.+|.|+-...+ ++++.+++-+++.-++
T Consensus 329 Ghr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 329 GHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred CCcccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 33334679998754444 9999999988887543
No 310
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=1.6e-13 Score=145.30 Aligned_cols=297 Identities=16% Similarity=0.102 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCC-ccchHHHHHhhcC--
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVS-AHSAYDKAAQYFN-- 247 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~-~h~s~~ka~~~~G-- 247 (541)
+.+.++.+.++++++-..+. + .|+++|+||+..|++.+|.+. | +++|+.-+. .|.+..-+....+
T Consensus 86 ~~~~~la~~L~~~~~~~~~~----v--~f~~SGseA~e~AlklAr~~t----g--r~~ii~~~~~yHG~t~~~~s~~~~~ 153 (433)
T PRK08117 86 ESILKLAEELAEITPGGLDC----F--FFSNSGAEAIEGALKLAKHVT----K--RPYIISFTGCFHGRTLGALSVTTSK 153 (433)
T ss_pred HHHHHHHHHHHHhCCCCCCE----E--EEeCcHHHHHHHHHHHHHHhc----C--CCeEEEECCCcCCcCHHHHhhcCCC
Confidence 34455666888887322222 4 899999999999999998652 2 255665554 4554444332221
Q ss_pred -----------CeEEEeeCCCCCc------------cCHHHHHHhhc-----cCceEEEeecCCCCCccccC----HHHH
Q 009181 248 -----------IKLWRVPVDKEFR------------ADVKAIKKYIN-----RNTVLIVGSAPGFPHGIIDP----IQEL 295 (541)
Q Consensus 248 -----------~~v~~v~~~~~~~------------~d~~~Le~~i~-----~~t~~vv~~~~~~~~G~id~----i~~I 295 (541)
-.+..+|....++ -|++++++.++ +++.+|++.......|.+.| +++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l 233 (433)
T PRK08117 154 SKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKL 233 (433)
T ss_pred ccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHH
Confidence 1234455432111 15667777764 35778888888888898888 9999
Q ss_pred HHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEeccccccccccccc
Q 009181 296 GELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVT 373 (541)
Q Consensus 296 ~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~ 373 (541)
.++|++||+++++|++++|+.. .|. .+.....| .|.++ +.|.+.++..+|+++.+++ +.....
T Consensus 234 ~~lc~~~g~llI~DEv~tG~gr-----~G~---~~~~~~~gv~pDi~t--~sK~lg~G~pigav~~~~~-i~~~~~---- 298 (433)
T PRK08117 234 REICDRHGILLIFDEVQTGFGR-----TGE---WFAAQTFGVVPDIMT--IAKGIASGLPLSAVVASKE-LMEQWP---- 298 (433)
T ss_pred HHHHHHcCCEEEEecchhccCc-----ccc---chhHhhcCCCCCEee--hhhhccCCCcceeEEEcHH-HHhhcc----
Confidence 9999999999999999987633 121 01111123 25544 4588655566887776543 332110
Q ss_pred ccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCC-CeEEecC-CC-eeEEEEecCC
Q 009181 374 EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIP-ELFIIGR-PD-MTIVAFGSDV 450 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~~-~~-~~~v~f~~~~ 450 (541)
... ...+..+. ....++..++++.+.. .+..++..++.+++++.|+++. .+.++.. +. ..++.+.+.+
T Consensus 299 ---~~~-~~~T~~~n--p~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~ 369 (433)
T PRK08117 299 ---LGS-HGTTFGGN--PVACAAALATLEVIKE---EKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVD 369 (433)
T ss_pred ---CCC-CCCCCCcC--HHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEec
Confidence 000 01111111 1112344444444433 3456667777788888777641 1111111 11 2333333321
Q ss_pred -------CCHHHHHHHHHhCCceeccCC-CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 451 -------VDIFEVNDIMSSKGWHLNPLQ-RPNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 451 -------~~~~~l~~~l~~~G~~~~~~~-~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
.....+.+.+.++|+.+...+ ..+.+|++++..++ +++++++++|.++++++.
T Consensus 370 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 370 PDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEALTEYE 431 (433)
T ss_pred CCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 124567788899998765433 24789999876655 999999999999998764
No 311
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.63 E-value=5.3e-14 Score=146.98 Aligned_cols=294 Identities=14% Similarity=0.124 Sum_probs=207.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEe
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v 253 (541)
.|.++..++.||++... .+++|.|.||...+++... +| +.|+++..+|-|...+.-+.|+..+++
T Consensus 73 ~eAqe~aA~~fgAd~ty-------FvvNGTS~ank~vi~a~~~-----~G---D~VLvdRN~HKSi~~glilaGa~Pvyl 137 (557)
T COG1982 73 KEAQELAARVFGADHTY-------FVVNGTSTANKAVINAVLT-----PG---DKVLVDRNCHKSIHHGLILAGATPVYL 137 (557)
T ss_pred HHHHHHHHHHhCCCceE-------EEECCccHHHHHHHHhhcC-----CC---CEEEecCCccHHHHHHHHHcCCceEEe
Confidence 45666999999999874 7899999999999999864 77 999999999999999999999999888
Q ss_pred eCCC------CCccCHHHHHHhhccC--c-eEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcC
Q 009181 254 PVDK------EFRADVKAIKKYINRN--T-VLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLG 324 (541)
Q Consensus 254 ~~~~------~~~~d~~~Le~~i~~~--t-~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g 324 (541)
.... -+.++.+.+++++.++ - +++++++||+ .|++.++++|.+.++++++|+.+|.+++...- +...
T Consensus 138 ~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~-~~~~-- 213 (557)
T COG1982 138 EPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFD-FSPM-- 213 (557)
T ss_pred cCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCccccc-cccc--
Confidence 7643 2468999999988654 3 7899999987 99999999999999999999999999875432 1110
Q ss_pred CCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHH
Q 009181 325 YPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL 404 (541)
Q Consensus 325 ~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l 404 (541)
.|. .-...+.|+++-|.||.+.+-..+|.+.+++........ ++ .........|.+..++|++-.|-++.
T Consensus 214 --l~~-~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r-~n------ea~~~h~STSPsY~l~ASlD~Ar~~~ 283 (557)
T COG1982 214 --LPE-SALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHER-FN------EALMMHQSTSPSYPLMASLDVARMQE 283 (557)
T ss_pred --Ccc-hhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHH-HH------HHHHHHccCCchHHHHHHHHHHHHhh
Confidence 222 112367899999999998777778887777631111100 00 00111222344455667777655555
Q ss_pred hHHH---HHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC---------------------eeEEEEe--cCCCCHHHHHH
Q 009181 405 GQEG---YLENTKAIMEVSESIQKGIKEIPELFIIGRPD---------------------MTIVAFG--SDVVDIFEVND 458 (541)
Q Consensus 405 g~~g---~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---------------------~~~v~f~--~~~~~~~~l~~ 458 (541)
+..| +++.++...+.++.+++...+++++++++++. ..=+.+. ..+.....+++
T Consensus 284 ~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~ 363 (557)
T COG1982 284 GNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAK 363 (557)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHH
Confidence 4444 44558888889999999999998899887763 1112233 22347899999
Q ss_pred HHHhCCceeccCCCCCe-EEEEecCCCH-HHHHHHHHHHH
Q 009181 459 IMSSKGWHLNPLQRPNS-IHICVTLQHV-AVVDVFLRDLR 496 (541)
Q Consensus 459 ~l~~~G~~~~~~~~~~~-iRi~~~~~~~-e~id~~i~~L~ 496 (541)
.|.++|+....++.... +-++...... .+++++++.++
T Consensus 364 ~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 364 YLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred HHHHcCCeeeecCCceeeEEeeeccchHHHHHHHHHHHHH
Confidence 99999987766554322 2233332222 56666666555
No 312
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=1.4e-13 Score=130.42 Aligned_cols=312 Identities=19% Similarity=0.230 Sum_probs=187.3
Q ss_pred cCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEec-CCcc
Q 009181 158 TNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIP-VSAH 236 (541)
Q Consensus 158 ~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~-~~~h 236 (541)
.+.++|+..++-..+...+..++.+-+|+.-.. .++ .+|+|+..+.+++.-.+..+. ..|- ...|+.| .+.|
T Consensus 65 e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~--~NI--alTnGSQs~fFYlfNlF~G~~--sdG~-~k~illPLaPeY 137 (417)
T COG3977 65 EALCNYDGPQGKAVLIDALAKMLRREYGWNITA--QNI--ALTNGSQSAFFYLFNLFAGRR--SDGT-EKKILLPLAPEY 137 (417)
T ss_pred HHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc--cee--eecCCccchHHHHHHHhcCcc--CCCc-ceeEeeccChhh
Confidence 345667888888888888999999999986321 137 899999999998887764221 1231 2345544 3334
Q ss_pred chHHHHHhhc------CCeEEEeeCCC-CCccCHHHHHHhhccCceEEEeecCCCCCcccc---CHHHHHHHHHHcCCEE
Q 009181 237 SAYDKAAQYF------NIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIID---PIQELGELALSHGTCL 306 (541)
Q Consensus 237 ~s~~ka~~~~------G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id---~i~~I~~la~~~~i~l 306 (541)
..+..++--- .-++..++-.. .+++|.++|+ |.+.+-+|+++-|+||||.+. .+.+|.++|++||++|
T Consensus 138 iGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPl 215 (417)
T COG3977 138 IGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPL 215 (417)
T ss_pred ccccccccCccceeeccCCcccccccceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcE
Confidence 3333222110 01222222111 4678999886 568899999999999999984 3778889999999999
Q ss_pred EEeCCcccchhhhhhhcCCCCCCCCcC----CCCc-eEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccC
Q 009181 307 HVDLCLGGFVLPFAKKLGYPIPPFDFS----VQGV-TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYV 381 (541)
Q Consensus 307 hvD~a~gg~~~~f~~~~g~~~p~~~~~----~~gv-dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~ 381 (541)
++|.|||.. | |.+-|. .++- ...|+|..|.|..+..||+ ++.++++.+..- ...+
T Consensus 216 iIDnAYg~P---F--------P~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GI-iIane~viqait----nmn~---- 275 (417)
T COG3977 216 IIDNAYGVP---F--------PGIIFSDATPLWNENIILCMSLSKLGLPGSRCGI-IIANEKVIQAIT----NMNG---- 275 (417)
T ss_pred EEecccCCC---C--------CceecccccccCCCCEEEEeehhhcCCCCcceeE-EEccHHHHHHHH----hccc----
Confidence 999999842 2 222221 2222 5678899999988889996 555555543221 1111
Q ss_pred CCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHH-----HHHHHHHHHHhhc-CCCeEE-ecCCCeeE-EEEecCC--C
Q 009181 382 SPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAI-----MEVSESIQKGIKE-IPELFI-IGRPDMTI-VAFGSDV--V 451 (541)
Q Consensus 382 ~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~-----~~~a~~l~~~L~~-~~~~~v-~~~~~~~~-v~f~~~~--~ 451 (541)
.-+++.+|.|..+++ +.+....+.++.++. .+.++...+.|++ +|..+. +..|+..+ .|+++++ .
T Consensus 276 iisLap~~~G~Aia~-----~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPI 350 (417)
T COG3977 276 IISLAPGRMGPAIAA-----EMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPI 350 (417)
T ss_pred eeeecCCCccHHHHH-----HHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCC
Confidence 123344555544321 112222222222211 1222333333332 333322 34555444 4445554 4
Q ss_pred CHHHHHHHHHhCCceecc-------CCC-----CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHc
Q 009181 452 DIFEVNDIMSSKGWHLNP-------LQR-----PNSIHICVTLQHVAVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 452 ~~~~l~~~l~~~G~~~~~-------~~~-----~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~~ 504 (541)
+..++.++|+++|..+.. +.. ..++|+++.. +.+.++.-++.|.+.++.+=+
T Consensus 351 tt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~-~~~~ie~Gva~lae~ve~~yq 414 (417)
T COG3977 351 TTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVP-EPEKIEKGVAILAEEVERAYQ 414 (417)
T ss_pred CHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecCC-CHHHHHHHHHHHHHHHHHHHh
Confidence 789999999999964322 111 1689999885 458899999999888876543
No 313
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.63 E-value=4.4e-13 Score=133.39 Aligned_cols=320 Identities=12% Similarity=0.088 Sum_probs=209.5
Q ss_pred CCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH
Q 009181 161 LHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (541)
Q Consensus 161 ~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ 240 (541)
++|..+.|+.++...+.+.....++.+... +-.+ ++|+|.|.++..+++++.+ +| +.|++...++++-.
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~-~wdi--iit~G~t~~l~~~l~~~~N-----~g---d~vlie~~ty~~AL 162 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYK-NWDI--IITNGNTDGLFKVLRTLIN-----RG---DHVLIEEYTYPSAL 162 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCC-CceE--EEecCCchHHHHHHHHhhc-----CC---CceEEecccchHHH
Confidence 456667788877776666666566666432 1135 8999999999999999987 67 89999999999999
Q ss_pred HHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc---------Cc-eEEEeecCCCCCccccCHH---HHHHHHHHcCCEEE
Q 009181 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYINR---------NT-VLIVGSAPGFPHGIIDPIQ---ELGELALSHGTCLH 307 (541)
Q Consensus 241 ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~---------~t-~~vv~~~~~~~~G~id~i~---~I~~la~~~~i~lh 307 (541)
..++.+|++++.|+.|++| +++|.|++.++. ++ ++..+..++||||...+++ +|.+||+||++.++
T Consensus 163 ~s~~a~gv~~ipv~md~~G-i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIV 241 (472)
T KOG0634|consen 163 QSMEALGVKIIPVKMDQDG-IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIV 241 (472)
T ss_pred HhccccCceEEeccccCCC-CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEE
Confidence 9999999999999988766 899999998853 12 5777888999999998864 89999999999999
Q ss_pred EeCCcccchhhh-hhhcCCCCCCCC--------------cCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccc
Q 009181 308 VDLCLGGFVLPF-AKKLGYPIPPFD--------------FSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAV 372 (541)
Q Consensus 308 vD~a~gg~~~~f-~~~~g~~~p~~~--------------~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~ 372 (541)
.|+.|.-.-++- .......-|.++ ....|-.+=.-++.|....+...||+- .++..++....
T Consensus 242 eDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it-~~~~~l~ril~-- 318 (472)
T KOG0634|consen 242 EDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWIT-GNSLFLKRILD-- 318 (472)
T ss_pred ecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEee-cCHHHHHHHhh--
Confidence 999996433210 000000011111 111221111224569865556789744 44433322110
Q ss_pred cccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHH----HHHHHHHHHhhc-CCCe--EEecCCCeeEEE
Q 009181 373 TEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIM----EVSESIQKGIKE-IPEL--FIIGRPDMTIVA 445 (541)
Q Consensus 373 ~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~----~~a~~l~~~L~~-~~~~--~v~~~~~~~~v~ 445 (541)
.+. ....| .+|....-+++.++..|++|+.+.+.+++ .++..+.++|.+ +|.- ++..+..+.+++
T Consensus 319 ----~ae---~~t~~-pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiw 390 (472)
T KOG0634|consen 319 ----LAE---VATSG-PSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIW 390 (472)
T ss_pred ----hcc---eeecC-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEE
Confidence 010 01111 22333446788888889887766665554 457777777876 5553 444444456667
Q ss_pred EecC-------C-CC-HH-HHHHHHHhCCceecc---------CC-CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 446 FGSD-------V-VD-IF-EVNDIMSSKGWHLNP---------LQ-RPNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 446 f~~~-------~-~~-~~-~l~~~l~~~G~~~~~---------~~-~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
+..+ + .+ .. .+...+.++|+.+.. .. .+-++|+++.....+++++.++++..++++.-
T Consensus 391 v~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f 468 (472)
T KOG0634|consen 391 VEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHF 468 (472)
T ss_pred EEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHh
Confidence 7764 1 12 22 344567788854321 11 11389999998888999999999998887643
No 314
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.62 E-value=4.2e-13 Score=141.86 Aligned_cols=305 Identities=18% Similarity=0.151 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccchHH-HHHhhcC--
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYD-KAAQYFN-- 247 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s~~-ka~~~~G-- 247 (541)
.+.++.+.+++++..+.+. + .++++||||+..|++.+|.+... +|- .+.+|+.-..+|.... .+....|
T Consensus 90 ~~~~la~~l~~~~p~~~~~----v--~f~~sGseA~e~AlklAr~~~~~-~g~~~r~~ii~~~~~yHG~t~gals~tg~~ 162 (442)
T PRK13360 90 KAFELANRIAEIAPGGLNH----V--FFTNSGSESVDTALKIALAYHRA-RGEGSRTRLIGRERGYHGVGFGGISVGGIV 162 (442)
T ss_pred HHHHHHHHHHHhCCCCCCE----E--EEeCCcHHHHHHHHHHHHHHHHh-cCCCCCcEEEEEcCCcCCccHhhhhccCCh
Confidence 3446777788876422222 4 89999999999999999976432 121 1457776666554432 2222211
Q ss_pred ----------CeEEEeeCCCC-----Cc--------cCHHHHHHhhc----cCceEEEeecCCCCCccccC----HHHHH
Q 009181 248 ----------IKLWRVPVDKE-----FR--------ADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELG 296 (541)
Q Consensus 248 ----------~~v~~v~~~~~-----~~--------~d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~----i~~I~ 296 (541)
..+..+|.... +. -..+++++++. +++.+|++.......|.+.| +++|.
T Consensus 163 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr 242 (442)
T PRK13360 163 PNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLR 242 (442)
T ss_pred hhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHH
Confidence 12344444311 10 02467888875 45788899988888898888 99999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCC-CCceEEEEeccccccccccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVT 373 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p-~g~g~ll~~~~~~~~~~~~~~~ 373 (541)
++|++||+++++|+++.||-. .|. .+.+...|+ |++++ .|.+.++ ..+|+++.+++ +.... ...+
T Consensus 243 ~lc~~~g~llI~DEv~tG~Gr-----tG~---~~a~~~~gv~PDivt~--gK~l~gG~~P~gav~~~~~-i~~~~-~~~~ 310 (442)
T PRK13360 243 EICDKHGILLIFDEVITGFGR-----LGA---PFAAQYFGVTPDLLTC--AKGLTNGAIPMGAVFVSSE-IHDAF-MQGP 310 (442)
T ss_pred HHHHHcCCEEEEechhhCCCC-----Ccc---chhhhhcCCCCceeee--eeccccCccceEEEEEcHH-HHHHh-hcCC
Confidence 999999999999999966532 121 111222333 77765 4875443 34666666543 32211 0000
Q ss_pred ccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC----CeeEEEEecC
Q 009181 374 EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP----DMTIVAFGSD 449 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~----~~~~v~f~~~ 449 (541)
........+.+..|.. ...++..++++.+..+ +..++..++.+++++.|+++.....+.+. -..-+-|...
T Consensus 311 ~~~~~~~~~~T~~g~p--l~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~ 385 (442)
T PRK13360 311 EAGIEFFHGYTYSGHP--LACAAALATLDLYERE---GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPR 385 (442)
T ss_pred ccccccccCCCCCCCH--HHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecC
Confidence 0000000011111211 1133555555555444 45677777788888888765322222221 1112222211
Q ss_pred C----CCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 450 V----VDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 450 ~----~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
. ....++.+.|.++|+.+...+ +.+|++++..++ +|+|++++.|+++++++
T Consensus 386 ~~~~~~~~~~~~~~l~~~Gvl~~~~~--~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 386 DGKPGKRAYEVFLKCFEKGLMIRYTG--DILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CCCcchhHHHHHHHHHHCCcEEEecC--CEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 1 124578888999998775433 579999887666 99999999999998764
No 315
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.61 E-value=7.6e-13 Score=138.99 Aligned_cols=297 Identities=18% Similarity=0.133 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEE-cCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhcC-
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNM-TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFN- 247 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~-t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~G- 247 (541)
+...++.+.+++++..+... .+.+ .| +++|+||+..|++.+|.+ .| +++|+.-+.+|.. ...+....|
T Consensus 78 ~~~~~lae~l~~~~~~~~~~-~~~~--~f~~~sGseA~e~AlklAr~~----tg--r~~ii~~~~~yHG~t~~als~~~~ 148 (412)
T TIGR02407 78 EAKREFLETFNEIILKPRGL-DYKV--QFPGPTGTNAVESALKLARKV----TG--RSNVVSFTNAFHGMTLGSLSVTGN 148 (412)
T ss_pred HHHHHHHHHHHHhccCccCC-CceE--EEeCCCchHHHHHHHHHHhhh----cC--CCeEEEECCCcCCchHHHHHhcCC
Confidence 44455666777765322110 0012 45 589999999999999975 22 3567766655444 333333222
Q ss_pred -----------CeEEEeeCCCCC---ccCHHHHHHhhc------cCceEEEeecCCCCCccccC----HHHHHHHHHHcC
Q 009181 248 -----------IKLWRVPVDKEF---RADVKAIKKYIN------RNTVLIVGSAPGFPHGIIDP----IQELGELALSHG 303 (541)
Q Consensus 248 -----------~~v~~v~~~~~~---~~d~~~Le~~i~------~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~ 303 (541)
..+..+|.+.-. .-+++.+++.++ +++.+|++.....+.|.+.+ +++|.++|++||
T Consensus 149 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g 228 (412)
T TIGR02407 149 RFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHD 228 (412)
T ss_pred cccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 134455543211 124777888886 35688888888888887533 899999999999
Q ss_pred CEEEEeCCcccchhhhhhhcCCCCCCCCcCCC--CceEEEeCCCCCCCC-CCCceEEEEecccccccccccccccCCCcc
Q 009181 304 TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQ--GVTSISVDVHKYGLA-PKGTSVVLYRNREIRKHQFVAVTEWSGGLY 380 (541)
Q Consensus 304 i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~--gvdsis~~~hK~~~~-p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~ 380 (541)
+++++|+++.||-. .|. .+.+... ..|.++++ |++.+ +..+|+++.+++ ... +. . ..
T Consensus 229 ~llI~DEV~tG~GR-----tG~---~~a~~~~~v~PDi~~~~--K~lg~~G~pigav~~~~~-~~~--~~--~----~~- 288 (412)
T TIGR02407 229 ILLIVDDIQAGCGR-----TGT---FFSFEPAGIEPDIVCLS--KSISGYGLPLALTLIKPE-LDV--WK--P----GE- 288 (412)
T ss_pred CEEEEechhhCCCc-----cch---hHHhcccCCCCCEEEec--hhccCCccceeEEEEchh-hhc--cC--C----Cc-
Confidence 99999999987632 111 0111112 23777665 98554 556898888654 211 10 0 00
Q ss_pred CCCcccCCCCCchHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHhhc----CCCeEEecCCCeeEEEEecCCC-CHH
Q 009181 381 VSPTVAGSRPGGLIAGAWAALMS-LGQEGYLENTKAIMEVSESIQKGIKE----IPELFIIGRPDMTIVAFGSDVV-DIF 454 (541)
Q Consensus 381 ~~~~~~gsr~~~~~a~~~~al~~-lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~f~~~~~-~~~ 454 (541)
...+..|... ..++..++++. +..+ +..++..++.+++++.|++ .+++..-......++++.+.+. ...
T Consensus 289 ~~~T~~gnpl--~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~~~~ 363 (412)
T TIGR02407 289 HNGTFRGNNL--AFVTATAALEYYWSDD---AFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGDLAG 363 (412)
T ss_pred cCCCCCccHH--HHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecChHHHH
Confidence 0111111100 12233455553 3333 3445555566666666553 4433222223456667776543 356
Q ss_pred HHHHHHHhCCceeccCCC-CCeEEEEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 455 EVNDIMSSKGWHLNPLQR-PNSIHICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 455 ~l~~~l~~~G~~~~~~~~-~~~iRi~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
++.+.+.++|+.+...+. ++.+|++++...+ +|++++++.|++++++
T Consensus 364 ~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 364 KIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred HHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 788899999987754432 4689999987666 9999999999998853
No 316
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.61 E-value=3e-13 Score=139.80 Aligned_cols=309 Identities=13% Similarity=0.045 Sum_probs=194.2
Q ss_pred cccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH
Q 009181 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka 242 (541)
|..+|.+.++|+ .+++++|.+. + +.|++||.|+.++..+.. ++| ++| +...|+...++
T Consensus 74 Yagd~s~~~LE~----~vAe~lG~e~------a--V~v~sGTaAl~ll~~l~v-----~pG---d~V--p~n~~f~Tt~a 131 (460)
T PRK13237 74 YAGSRNFYHLEE----TVQEYYGFKH------V--VPTHQGRGAENLLSRIAI-----KPG---QYV--PGNMYFTTTRY 131 (460)
T ss_pred hcCCCcHHHHHH----HHHHHHCCCe------E--EEeCCHHHHHHHHHHhCC-----CCc---CEE--CCccchHhhHH
Confidence 445677777777 7888888874 2 899999999998533221 255 653 77778777666
Q ss_pred -HhhcCCeEEEeeCC----------CCCccCHHHHHHhhccC----ceEEEeecCCCCC-ccc---cCHHHHHHHHHHcC
Q 009181 243 -AQYFNIKLWRVPVD----------KEFRADVKAIKKYINRN----TVLIVGSAPGFPH-GII---DPIQELGELALSHG 303 (541)
Q Consensus 243 -~~~~G~~v~~v~~~----------~~~~~d~~~Le~~i~~~----t~~vv~~~~~~~~-G~i---d~i~~I~~la~~~~ 303 (541)
..+.|+...-+..+ .+|.+|+++|+++|+++ +.++.+..++|.. |.. +++++|.++|++||
T Consensus 132 hI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~G 211 (460)
T PRK13237 132 HQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHG 211 (460)
T ss_pred HHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcC
Confidence 77788855544311 37899999999999864 3456777777777 444 47899999999999
Q ss_pred CEEEEeCCcccchhhhhh--hcCCCCCCCC----cCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCC
Q 009181 304 TCLHVDLCLGGFVLPFAK--KLGYPIPPFD----FSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG 377 (541)
Q Consensus 304 i~lhvD~a~gg~~~~f~~--~~g~~~p~~~----~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~ 377 (541)
++||.|+|......-|.. ..|+.-.+.. -.....|.+++|+||.+.+|. .|+++++++++.+........|.|
T Consensus 212 l~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL~~~~r~~~~~~eG 290 (460)
T PRK13237 212 IKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEELFDEAKELVVVYEG 290 (460)
T ss_pred CEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHHHHHHHHhccccCC
Confidence 999999997533211111 1111000000 001245999999999987776 566788888776554333222322
Q ss_pred CccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-------
Q 009181 378 GLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV------- 450 (541)
Q Consensus 378 ~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~------- 450 (541)
-. ....+.|++ +.++-.++...- -.+.+++..+.++||.+.|.+. |+.++.|...+-|.+....
T Consensus 291 ~~-tygg~~grd----~~alAvgl~E~~---~~~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~~lph~~~ 361 (460)
T PRK13237 291 MP-SYGGMAGRD----MEAMAIGIEESV---QYEYIEHRVGQVRYLGEKLLAA-GVPIVEPVGGHAVFLDARRFLPHLPQ 361 (460)
T ss_pred Cc-CCCChhhhH----HHHHHhHHHhhc---hHHHHHHHHHHHHHHHHHHHHC-CCceecCCCceEEEEEhHHhCCCCCc
Confidence 11 001111221 223333332111 1277888888999999999987 9999988777777765322
Q ss_pred --CCHHHHHHHHHhC-Cce---eccC--------C---CC--CeEEEEecC--CCHHHHHHHHHHHHHHHHHHH
Q 009181 451 --VDIFEVNDIMSSK-GWH---LNPL--------Q---RP--NSIHICVTL--QHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 451 --~~~~~l~~~l~~~-G~~---~~~~--------~---~~--~~iRi~~~~--~~~e~id~~i~~L~~~~~~l~ 503 (541)
.....++-.|-.. |+- +.++ + .+ ..+|++++. ++.+.+|...+.|..+.+.-.
T Consensus 362 ~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~ 435 (460)
T PRK13237 362 DQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHRE 435 (460)
T ss_pred ccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhHh
Confidence 1355666555443 321 1110 1 11 468999875 344899999999988876543
No 317
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.61 E-value=5.5e-13 Score=141.09 Aligned_cols=304 Identities=18% Similarity=0.159 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccchH-HHHHhhcC---
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAY-DKAAQYFN--- 247 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s~-~ka~~~~G--- 247 (541)
..++.+.+++++..+.+. + .|+++||||+..|++.+|.+...+ |- .+.+|+.-..+|... ..+....|
T Consensus 94 ~~~la~~L~~~~p~~~~~----v--~f~~sGseAve~AlklAr~~~~~~-g~~~r~~ii~~~~~yHG~t~gals~~~~~~ 166 (445)
T PRK09221 94 AFELAERLAELAPGGLDH----V--FFTNSGSESVDTALKIALAYHRAR-GQGTRTRLIGRERGYHGVGFGGISVGGIVN 166 (445)
T ss_pred HHHHHHHHHHhCCCCCCE----E--EEeCCcHHHHHHHHHHHHHHHHhc-CCCCCcEEEEECCCcCccchhhhccCCChh
Confidence 445667777877432232 5 899999999999999999865332 21 235677666554432 22222211
Q ss_pred ---------CeEEEeeCCC-C----Cc--------cCHHHHHHhhc----cCceEEEeecCCCCCccccC----HHHHHH
Q 009181 248 ---------IKLWRVPVDK-E----FR--------ADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELGE 297 (541)
Q Consensus 248 ---------~~v~~v~~~~-~----~~--------~d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~----i~~I~~ 297 (541)
..+..+|... . +. -..+++++.+. +++.+|++.......|.+.| +++|.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~ 246 (445)
T PRK09221 167 NRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLRE 246 (445)
T ss_pred hhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHH
Confidence 1233444321 0 00 12357777775 45788999988888899888 999999
Q ss_pred HHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCC-CCceEEEEecccccccccccccc
Q 009181 298 LALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTE 374 (541)
Q Consensus 298 la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p-~g~g~ll~~~~~~~~~~~~~~~~ 374 (541)
+|++||+++++|+++.||-. .|. .+.+...|+ |+++++ |.+.++ ...|+++.+++ +..... ..+.
T Consensus 247 lc~~~g~llI~DEV~tG~GR-----tG~---~~~~~~~gv~PDi~~~g--K~l~gG~~Pi~av~~~~~-i~~~~~-~~~~ 314 (445)
T PRK09221 247 ICDKHGILLIFDEVITGFGR-----LGA---AFAAERFGVTPDIITFA--KGLTNGAIPMGAVIASDE-IYDAFM-QGPE 314 (445)
T ss_pred HHHHcCCEEEEeehhhCCCc-----Cch---hhHHHhcCCCCCEEEec--cccccCcccceeeEEcHH-HHHhhc-cCcc
Confidence 99999999999999876632 111 111122233 776665 664433 23566666543 322111 0000
Q ss_pred cCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCC--CeeEEEEecCC--
Q 009181 375 WSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRP--DMTIVAFGSDV-- 450 (541)
Q Consensus 375 ~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~f~~~~-- 450 (541)
.........+..|. +-+ .++..++++.+..+ +..++..++.++|++.|+++.+...+.+. ...+..+.+..
T Consensus 315 ~~~~~~~~~T~~~~-pl~-~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~ 389 (445)
T PRK09221 315 YAIEFFHGYTYSAH-PVA-CAAGLATLDIYREE---DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRP 389 (445)
T ss_pred cccccccccCCCcC-HHH-HHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEeccc
Confidence 00000001111111 111 22344555555433 45778888889999988876332222211 12222332221
Q ss_pred ----CCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 451 ----VDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 451 ----~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
....++.+.+.++|+.+... .+.+|++++...+ +|+|++++.|+++++++
T Consensus 390 ~~~~~~~~~~~~~~~~~Gv~~~~~--~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 390 GAPGARGYEAFMKCFEKGLLVRYT--GDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred ccccchHHHHHHHHHHCCeEEeec--CCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 12457888999999877543 3579999887666 99999999999998764
No 318
>PRK07678 aminotransferase; Validated
Probab=99.61 E-value=5.1e-13 Score=141.66 Aligned_cols=300 Identities=19% Similarity=0.182 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccch-HHHHHhhcCC-
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSA-YDKAAQYFNI- 248 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s-~~ka~~~~G~- 248 (541)
.+.++.+.++++++... . + .|+++||||+..|++.+|.+... +|. .+.+|+.-..+|.. ..-+....|.
T Consensus 90 ~~~~lae~l~~~~~~~~-~----v--~f~~sGseA~e~AlklAr~~t~~-~g~~~r~~ii~~~~~yHG~t~~als~~~~~ 161 (451)
T PRK07678 90 PAIKLAEKLNEWLGGEY-V----I--FFSNSGSEANETAFKIARQYHAQ-KGEPHRYKFISRYRAYHGNSMGALAATGQA 161 (451)
T ss_pred HHHHHHHHHHHhCCCCC-E----E--EEeCCcHHHHHHHHHHHHHHHHh-cCCCCCcEEEEECCCcCCccHHHhhcCCCc
Confidence 34457777888775432 2 4 89999999999999999986533 221 14667766655444 3333322221
Q ss_pred -----------eEEEeeCCCCCcc---------C---HHHHHHhhc----cCceEEEeecCCCCCccccC----HHHHHH
Q 009181 249 -----------KLWRVPVDKEFRA---------D---VKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELGE 297 (541)
Q Consensus 249 -----------~v~~v~~~~~~~~---------d---~~~Le~~i~----~~t~~vv~~~~~~~~G~id~----i~~I~~ 297 (541)
.+..+|....++. | .+.+++.+. +++.+|++......-|.+.| ++++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~ 241 (451)
T PRK07678 162 QRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKE 241 (451)
T ss_pred ccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHH
Confidence 2344443322211 1 234566664 46788898888777787765 899999
Q ss_pred HHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCC-CCceEEEEecccccccccccccc
Q 009181 298 LALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTE 374 (541)
Q Consensus 298 la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p-~g~g~ll~~~~~~~~~~~~~~~~ 374 (541)
+|++||+++++|+++.||-. .|. .+.+...| .|++++. |.+.++ ..+|+++.+++ +.... . ..
T Consensus 242 lc~~~g~llI~DEV~tGfGR-----tG~---~~~~~~~gv~PDivt~g--K~lggG~~Pi~av~~~~~-i~~~~-~--~~ 307 (451)
T PRK07678 242 ICQKHGALLISDEVICGFGR-----TGK---AFGFMNYGVKPDIITMA--KGITSAYLPLSATAVKKE-IYEAF-K--GK 307 (451)
T ss_pred HHHHcCCEEEEeehhhcCCc-----Cch---hHHHHhcCCCCCEEEee--cccccCCcceeEEEEcHH-HHHHH-h--cc
Confidence 99999999999999977633 110 01112233 3888774 875554 35787777654 22111 0 00
Q ss_pred cCCCccCCCcccCCCCCchH---HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhc----CCCe-EEecCCCeeEEEE
Q 009181 375 WSGGLYVSPTVAGSRPGGLI---AGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKE----IPEL-FIIGRPDMTIVAF 446 (541)
Q Consensus 375 ~~~~~~~~~~~~gsr~~~~~---a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~-~v~~~~~~~~v~f 446 (541)
...+ ....++.+++.. ++..++++.+.++ +..++..++.++|.+.|++ .+.+ ++-+ ...++.+
T Consensus 308 ~~~~----~~~h~~T~~gnp~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg--~Gl~~~i 378 (451)
T PRK07678 308 GEYE----HFRHVNTFGGNPAACALALKNLEIMENE---NLIERSAQLGELLLEQLKEELGEHPLVGDIRG--KGLLVGI 378 (451)
T ss_pred Cccc----ccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEe--eceEEEE
Confidence 0000 011222222222 3444455444333 4566777777777777754 2221 1222 2333344
Q ss_pred ecCC-------CC---HHHHHHHHHhCCceeccCC-----CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 447 GSDV-------VD---IFEVNDIMSSKGWHLNPLQ-----RPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 447 ~~~~-------~~---~~~l~~~l~~~G~~~~~~~-----~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
.+.. .+ ..++...|.++|+.+...+ ..+.+|++++..++ +|+|++++.++++++++
T Consensus 379 ~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 379 ELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred EEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 3311 11 4567788999998765432 23679999887666 99999999999998765
No 319
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=5.4e-13 Score=141.34 Aligned_cols=304 Identities=16% Similarity=0.119 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccchHH-HHHhhcCC-
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYD-KAAQYFNI- 248 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s~~-ka~~~~G~- 248 (541)
...++.+.++++++.+... + .|+++||||+..|++.+|.+... +|. .+.+|+.-..+|.... -+....|-
T Consensus 98 ~~~~lAe~L~~~~p~~~~~----v--~f~~sGseAve~AlKlA~~~~~~-rg~~~r~~Ii~~~~~yHG~t~gals~~~~~ 170 (453)
T PRK06943 98 PAIELAERLAALTGGTLGH----A--FFASDGASAVEIALKMSFHAWRN-RGRGDKREFVCLANGYHGETIGALGVTDVA 170 (453)
T ss_pred HHHHHHHHHHHhCCCCCCE----E--EEeCCCHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCcCCCcHHhhcccCCh
Confidence 4445677777877543232 4 89999999999999999875432 222 1466777666655433 22222221
Q ss_pred -----------eEEEeeCCCCCc------------cCHHHHHHhhc---cCceEEEeec-CCCCCccccC----HHHHHH
Q 009181 249 -----------KLWRVPVDKEFR------------ADVKAIKKYIN---RNTVLIVGSA-PGFPHGIIDP----IQELGE 297 (541)
Q Consensus 249 -----------~v~~v~~~~~~~------------~d~~~Le~~i~---~~t~~vv~~~-~~~~~G~id~----i~~I~~ 297 (541)
.+..+|...... -+++++++.++ +++.+|++.. .....|.+.+ +++|.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~ 250 (453)
T PRK06943 171 LFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRA 250 (453)
T ss_pred hhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHH
Confidence 233444332111 13577788775 4678888887 3666777654 889999
Q ss_pred HHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCC-CceEEEEecccccccccccccc
Q 009181 298 LALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVTE 374 (541)
Q Consensus 298 la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~~ 374 (541)
+|++||+.+|+|+++.||-. .|. .+.+...|+ |++++. |.+.+++ ..|+++.+++ +...... ..
T Consensus 251 lc~~~gillI~DEV~TG~GR-----tG~---~fa~~~~gv~PDivt~g--Kgl~gG~~Pi~av~~~~e-i~~~~~~--~~ 317 (453)
T PRK06943 251 LCDRYGVHLIADEIAVGCGR-----TGT---FFACEQAGVWPDFLCLS--KGISGGYLPLSLVLSRDA-IFAAFYD--DD 317 (453)
T ss_pred HHHHcCCEEEeechhhCCCC-----Ccc---hhHHHhCCCCCCeEeee--hhhccCcccceEEEEcHH-HHHhhcc--cC
Confidence 99999999999999877632 221 122223343 888875 7655553 5777777654 2211100 00
Q ss_pred cCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC---CCeEEecCCCeeEEEEecC-C
Q 009181 375 WSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI---PELFIIGRPDMTIVAFGSD-V 450 (541)
Q Consensus 375 ~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~f~~~-~ 450 (541)
..+ ....++..++..+++.+++..+..-.-.+..++..++.++|.+.|+++ +.+.-+ .....++.+.+. +
T Consensus 318 ~~~-----~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~v-rG~Gl~~gvel~~~ 391 (453)
T PRK06943 318 VTR-----GFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHL-RQRGTIFAFDVALD 391 (453)
T ss_pred ccC-----CccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEeE-eccccEEEEEEccC
Confidence 000 011222222223344444444432222345677777778888887664 333211 112333444332 1
Q ss_pred CC-----HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 451 VD-----IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 451 ~~-----~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
.+ ..++...+.++|..+...+ +.+|++++...+ +|+|++++.|+++++++.
T Consensus 392 ~~~~~~~~~~i~~~~~~~Gll~~~~g--~~l~~~Ppl~it~~eid~~~~~l~~al~~~~ 448 (453)
T PRK06943 392 GDAARTFSRRFFEAALERELLLRPIG--TTVYLMPPYVLDDDEIAWLAERTRATLDATL 448 (453)
T ss_pred CCcchHHHHHHHHHHHHCCcEEEecC--CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 11 3467788899998776544 469999776655 999999999999998764
No 320
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.60 E-value=6.3e-13 Score=139.14 Aligned_cols=294 Identities=16% Similarity=0.106 Sum_probs=175.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC--CCCeEEecCCccch-HHHHHhhcCC-
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI--TRPEMIIPVSAHSA-YDKAAQYFNI- 248 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi--~~~~vi~~~~~h~s-~~ka~~~~G~- 248 (541)
..++.+.++++.+.. +. + .++++||||+..|++.+|.+... +|. .+.+|+.-..+|.. ...+....|-
T Consensus 84 ~~~la~~L~~~~~~~-~~----v--~f~~sGseA~e~AlklAr~~~~~-~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~ 155 (408)
T PRK04612 84 PLKLAEELVTASRFA-EK----V--FLCNSGTEANEAAIKLVRKWASS-QGRPADKRVIVTFRGSFHGRTLAAVTATAQP 155 (408)
T ss_pred HHHHHHHHHhhCCCC-CE----E--EEcCchHHHHHHHHHHHHHHHHh-hCCCCCCcEEEEECCCcCCccHHHHHhcCCc
Confidence 345666777765432 22 5 89999999999999999986532 232 24567766655444 3333333221
Q ss_pred -----------eEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC-----HHHHHHHHHHcCCEEEEeCCc
Q 009181 249 -----------KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP-----IQELGELALSHGTCLHVDLCL 312 (541)
Q Consensus 249 -----------~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~-----i~~I~~la~~~~i~lhvD~a~ 312 (541)
.+..+|. -|++++++++.+++...++.-|.+++|.+.+ +++|.++|++||+++++|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 230 (408)
T PRK04612 156 KYQEGYEPLPGGFRYVDF-----NDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQ 230 (408)
T ss_pred ccccCCCCCCCCceEcCC-----CCHHHHHHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 1122222 2789999999755555555555666664422 889999999999999999999
Q ss_pred ccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCC
Q 009181 313 GGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (541)
Q Consensus 313 gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~ 390 (541)
.|+.. .|. .+.....++ |..++ .|.+.++..+|+++.+++ +...... ... ..+..|+.
T Consensus 231 tg~gr-----~G~---~~a~~~~~~~pdi~t~--~K~l~~G~piga~~~~~~-~~~~~~~---~~~-----~~t~~~~p- 290 (408)
T PRK04612 231 CGMGR-----TGT---LFAHWQEQVTPDIVTL--AKALGGGFPIGAMLAGPK-VAETMQF---GAH-----GTTFGGNP- 290 (408)
T ss_pred cCCCc-----CCc---hhhhhhcCCCCCEEEE--cchhcCCCceEEEEECHH-HHhhhcC---CCc-----CCCCCCCH-
Confidence 87533 121 111122233 55555 488655566888776643 3221100 000 11111221
Q ss_pred CchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCC-CeEEecC--CCeeEEEEecCC---CCHHHHHHHHHhCC
Q 009181 391 GGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIP-ELFIIGR--PDMTIVAFGSDV---VDIFEVNDIMSSKG 464 (541)
Q Consensus 391 ~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~~--~~~~~v~f~~~~---~~~~~l~~~l~~~G 464 (541)
...++..++++.+.+ .+..++..++.+++.+.|+++. .+.+++. ....++.+.+.+ ....++.+.+.++|
T Consensus 291 -~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~G 366 (408)
T PRK04612 291 -LAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHG 366 (408)
T ss_pred -HHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHHCC
Confidence 112244444444432 4567778888888888887641 1222222 224444444432 13567888999999
Q ss_pred ceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 465 WHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 465 ~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
..+...+ ++.+|++++...+ +|++++++.++++++++.+
T Consensus 367 vlv~~~g-~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 367 LLLLQAG-PDVLRFVPALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred eEEeeCC-CCEEEEcCCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 8775443 3789998876555 9999999999999977543
No 321
>PRK06105 aminotransferase; Provisional
Probab=99.60 E-value=6.2e-13 Score=141.29 Aligned_cols=305 Identities=15% Similarity=0.139 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCc-cchHHHHHhhcCC
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSA-HSAYDKAAQYFNI 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~-h~s~~ka~~~~G~ 248 (541)
+.+.++.+.+++++..+.+. + .|+++||||+..|++.+|.+... +|. .+.+|+.-..+ |-....+....+.
T Consensus 92 ~~~~~lae~L~~~~p~~~~~----v--~f~~SGseAve~AlKlar~~~~~-~g~t~r~~il~~~~~yHG~t~~a~s~t~~ 164 (460)
T PRK06105 92 GPVIDLAEKLVAMAPVPMSK----V--FFTNSGSEANDTVVKLVWYYNNA-LGRPEKKKIISRQRGYHGVTIASASLTGL 164 (460)
T ss_pred HHHHHHHHHHHHhCCCCCCE----E--EEeCCcHHHHHHHHHHHHHHHHh-cCCCCCcEEEEecCccCCcchhheeccCC
Confidence 44455677888887543332 4 89999999999999999865322 232 24567665544 4444333322221
Q ss_pred ------------eEEEeeCCCCCc-------------cCHHHHHHhhc----cCceEEEeecCCCCCccccC----HHHH
Q 009181 249 ------------KLWRVPVDKEFR-------------ADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQEL 295 (541)
Q Consensus 249 ------------~v~~v~~~~~~~-------------~d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~----i~~I 295 (541)
.+..+|....++ ...+++++++. +++.+|++......-|.+.+ +++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~l 244 (460)
T PRK06105 165 PNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKI 244 (460)
T ss_pred cccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHH
Confidence 233343321111 12467787773 35788888888777788766 9999
Q ss_pred HHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCC-CCceEEEEecccccccccccc
Q 009181 296 GELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAV 372 (541)
Q Consensus 296 ~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p-~g~g~ll~~~~~~~~~~~~~~ 372 (541)
.++|++||+++++|+++.||-. .|. .+.+...| .|+++++ |.+.++ ...|+++.+++ +..... .
T Consensus 245 r~lc~~~~~llI~DEv~tG~GR-----tG~---~f~~~~~~v~PDi~~~g--K~lggG~~P~~av~~~~~-i~~~~~--~ 311 (460)
T PRK06105 245 QAVLRKYDILLVADEVICGFGR-----TGN---MFGCETFGIKPDILVMS--KQLSSSYQPLSAVLMNEK-VYDPIA--D 311 (460)
T ss_pred HHHHHHcCCeEEEeccccCCCc-----Cch---hhhHHhcCCCCCeeeee--cccccCcccceEEEEcHH-HHHHHh--c
Confidence 9999999999999999976632 111 11122233 3777765 775554 35676777643 322110 0
Q ss_pred cccCCCccCCCcccCCCCCchHHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEEe
Q 009181 373 TEWSGGLYVSPTVAGSRPGGLIAG---AWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAFG 447 (541)
Q Consensus 373 ~~~~~~~~~~~~~~gsr~~~~~a~---~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~ 447 (541)
.....+ ....++..++..++ ..++|+.+.+ .+..++..++.++|++.|+++....++.+ ....+..+.
T Consensus 312 ~~~~~~----~~~h~~T~~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie 384 (460)
T PRK06105 312 ESGKIG----TFGHGFTASGHPVAAAVALENLAIIEE---RDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVE 384 (460)
T ss_pred ccccCc----ccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEE
Confidence 000000 01122222222223 3445554443 35677888888888888877533222222 113343443
Q ss_pred cCC--C-----C-----HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 448 SDV--V-----D-----IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 448 ~~~--~-----~-----~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
+.. . + ..++...+.++|+.+...+ +.+|++++...+ +|+|++++.+.++++++.+
T Consensus 385 ~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g--~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 385 LVADKATKTPFEPPGKVGARANAAAHEHGVISRAMG--DTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred EecCcccCCCCCchhHHHHHHHHHHHHCCeEEEecC--CEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 311 0 0 2467788889998776543 589998876444 9999999999999988765
No 322
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=1.2e-12 Score=138.87 Aligned_cols=297 Identities=19% Similarity=0.167 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH-HHHhhcCC-
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD-KAAQYFNI- 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~-ka~~~~G~- 248 (541)
+...++.+.+++++...... .+ .++++|+||+..|++.+|.+. | +++|+....+|..+. .+....+.
T Consensus 99 ~~~~~la~~l~~~~p~~~~~---~v--~f~~sGseA~e~AlklAr~~t----g--r~~ii~~~~~yHG~t~~al~~~~~~ 167 (443)
T PRK06058 99 EGYVAVAEQLNRLTPGDHEK---RS--ALFNSGAEAVENAVKIARSYT----G--RQAVVVFDHAYHGRTNLTMALTAKS 167 (443)
T ss_pred HHHHHHHHHHHHhCCCCCCC---EE--EEeCCcHHHHHHHHHHHHHhh----C--CCeEEEECCCcCcChHHHHhhcCCC
Confidence 44556777888887543211 14 789999999999999998752 2 256777666655443 33332211
Q ss_pred ------------eEEEeeCCCCCc------c--------CHHHHHHhhc-cCceEEEeecCCCCCccccC----HHHHHH
Q 009181 249 ------------KLWRVPVDKEFR------A--------DVKAIKKYIN-RNTVLIVGSAPGFPHGIIDP----IQELGE 297 (541)
Q Consensus 249 ------------~v~~v~~~~~~~------~--------d~~~Le~~i~-~~t~~vv~~~~~~~~G~id~----i~~I~~ 297 (541)
.+..+|....++ . ..+.+++.+. +++.+|++.......|.+.| +++|.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~ 247 (443)
T PRK06058 168 MPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLE 247 (443)
T ss_pred cccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHH
Confidence 233333221111 0 1334555554 45777777776665666654 899999
Q ss_pred HHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEeccccccccccccccc
Q 009181 298 LALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEW 375 (541)
Q Consensus 298 la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~ 375 (541)
+|++||+++++|+++.||... |. .+.+...|+ |.+++. |.+.++...|+++.+++ +..... .
T Consensus 248 lc~~~gillI~DEV~tGfgRt-----G~---~fa~~~~gv~PDiv~~g--K~l~~G~Pi~av~~~~~-i~~~~~---~-- 311 (443)
T PRK06058 248 WCRENGVVFIADEVQTGFART-----GA---WFACEHEGIVPDLITTA--KGIAGGLPLSAVTGRAE-IMDAPH---P-- 311 (443)
T ss_pred HHHHcCCEEEEeccccCCCcC-----hh---hhHHHhcCCCCCEEEEc--ccccCCCccEEEEEcHH-HHhhcc---C--
Confidence 999999999999999887431 11 111122233 777774 87666666888777543 322110 0
Q ss_pred CCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEec--CCCeeEEEEecCCC-
Q 009181 376 SGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIG--RPDMTIVAFGSDVV- 451 (541)
Q Consensus 376 ~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~--~~~~~~v~f~~~~~- 451 (541)
. ..++..+....++.+++..+..-.-.+..++..++.++|.+.|+++ ....++. .....++.+.+.+.
T Consensus 312 --~------~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~ 383 (443)
T PRK06058 312 --G------GLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPG 383 (443)
T ss_pred --C------CCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCC
Confidence 0 0112222223345555544432222356777777888888888764 1122221 22344444443211
Q ss_pred ----C---HHHHHHHHHhCCceeccCC-CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 452 ----D---IFEVNDIMSSKGWHLNPLQ-RPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 452 ----~---~~~l~~~l~~~G~~~~~~~-~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
+ ...+.+.+.++|+.+...+ .++.+|+.++...+ +++|+++++|+++++++
T Consensus 384 ~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 384 TTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred CCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 1 3456777889998775432 34689998776655 99999999999998653
No 323
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.59 E-value=1.7e-12 Score=136.91 Aligned_cols=303 Identities=17% Similarity=0.125 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEE-cCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH-HHHHhhc--
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNM-TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY-DKAAQYF-- 246 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~-t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~-~ka~~~~-- 246 (541)
....++.+.+++++..+... ...+ .| +++||||+..|++.+|.+. | +++|+.-..+|... .-+....
T Consensus 82 ~~~~~lae~l~~~~~~~~~~-~~~~--~f~~~sGseA~e~AlklAr~~t----g--r~~ii~~~~~yHG~t~~~ls~~~~ 152 (425)
T PRK09264 82 TAKREFLETFEETILKPRGL-DYKV--QFTGPTGTNAVEAALKLARKVT----G--RTNIVAFTNGFHGMTLGSLAVTGN 152 (425)
T ss_pred HHHHHHHHHHHHhhcCCcCC-CceE--EEeCCCHHHHHHHHHHHHHHhc----C--CCeEEEECCccCCccHHHHHhcCC
Confidence 33445666777765333110 0012 45 5899999999999999752 2 35677666554443 2222221
Q ss_pred -------CC---eEEEeeCCCCC--c-cCHHHHHHhhcc------CceEEEeecCCCCCcccc----CHHHHHHHHHHcC
Q 009181 247 -------NI---KLWRVPVDKEF--R-ADVKAIKKYINR------NTVLIVGSAPGFPHGIID----PIQELGELALSHG 303 (541)
Q Consensus 247 -------G~---~v~~v~~~~~~--~-~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id----~i~~I~~la~~~~ 303 (541)
+. .+..+|..... . -|++++++.+.+ ++.+|++.......|.+. .+++|.++|++||
T Consensus 153 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g 232 (425)
T PRK09264 153 SHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHD 232 (425)
T ss_pred cccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 11 35556654211 1 267888888852 467888888877777653 3899999999999
Q ss_pred CEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCC-CCCceEEEEecccccccccccccccCCCccCC
Q 009181 304 TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLA-PKGTSVVLYRNREIRKHQFVAVTEWSGGLYVS 382 (541)
Q Consensus 304 i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~-p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~ 382 (541)
+++++|+++.|+.. .|... .++......|+++++ |.+.+ +..+|+++.+++ +. . |..+.. .
T Consensus 233 ~llI~DEV~tG~Gr-----tG~~~-~~~~~~v~PDi~t~~--K~l~~~G~pigav~~~~~-i~--~------~~~~~~-~ 294 (425)
T PRK09264 233 ILLIVDDIQAGCGR-----TGTFF-SFERAGITPDIVTLS--KSISGYGLPMALVLIKPE-LD--V------WKPGEH-N 294 (425)
T ss_pred cEEEEechhhCCcc-----ccHHH-HHhhcCCCCCEEEec--cccCCCccceEEEEEchh-hh--c------cCCCcc-C
Confidence 99999999987632 11000 011111123777664 87433 344688887644 32 1 110100 1
Q ss_pred CcccCCCCCchHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHhhc----CCCeEEec-CCCeeEEEEecCCC-CHHH
Q 009181 383 PTVAGSRPGGLIAGAWAAL-MSLGQEGYLENTKAIMEVSESIQKGIKE----IPELFIIG-RPDMTIVAFGSDVV-DIFE 455 (541)
Q Consensus 383 ~~~~gsr~~~~~a~~~~al-~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~-~~~~~~v~f~~~~~-~~~~ 455 (541)
.+..|... ..++..+++ ..+.. .+..++..++.+++++.|++ .|.+ +.. .....++++.+.+. ...+
T Consensus 295 ~T~~gnp~--~~aaa~a~l~~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~i~l~~~~~~~~ 368 (425)
T PRK09264 295 GTFRGNNL--AFVTATAALEEYWSD---DAFEKEVKAKGELVRERLEEIAAKYPGL-GAEVRGRGMMQGIDFGDGELAGK 368 (425)
T ss_pred CCCCCCHH--HHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHHhCCCc-eecceecccEEEEEecChHHHHH
Confidence 11111100 122344444 22222 24566666677777776655 3322 111 12345556666443 3567
Q ss_pred HHHHHHhCCceeccCC-CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHcCC
Q 009181 456 VNDIMSSKGWHLNPLQ-RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQNP 506 (541)
Q Consensus 456 l~~~l~~~G~~~~~~~-~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~~~ 506 (541)
+.+.+.++|+.+...+ ....+|++++..++ ++++++++.|+++++++.+..
T Consensus 369 l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~~~ 421 (425)
T PRK09264 369 IAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEEGLDILEEAVAEVLAEE 421 (425)
T ss_pred HHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 8889999998775543 24688998876666 999999999999998876543
No 324
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.59 E-value=4.6e-13 Score=137.34 Aligned_cols=329 Identities=18% Similarity=0.147 Sum_probs=205.7
Q ss_pred HHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhC-CCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhc
Q 009181 144 HFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLG-NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKR 222 (541)
Q Consensus 144 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g-~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~ 222 (541)
+.+.+.+-+......++.....-| .. ++.+.++++.. .+-+. + .+|+|||+|+..|++.++.+... +
T Consensus 65 i~~Ai~~Q~~~l~~~~~~~~t~~P-a~----~LA~~L~~~aP~~~l~~----v--Ff~~sGSeAvEtAlKma~qY~~~-~ 132 (449)
T COG0161 65 IAEAIKKQLDKLPHVMFGGFTHEP-AI----ELAEKLAELAPEGGLDH----V--FFTDSGSEAVETALKMALQYWRA-R 132 (449)
T ss_pred HHHHHHHHHHhCCchhhcccCCch-HH----HHHHHHHHhCCCCCccE----E--EEeCCchHHHHHHHHHHHHHHHh-c
Confidence 444555555544444444444445 22 46668888876 32332 5 89999999999999999987664 3
Q ss_pred CCC-CCeEEecCCc-cchHHHHHhhcCC-------------eEEEeeCCC------CCc------cCHHHHHHhhcc---
Q 009181 223 GIT-RPEMIIPVSA-HSAYDKAAQYFNI-------------KLWRVPVDK------EFR------ADVKAIKKYINR--- 272 (541)
Q Consensus 223 Gi~-~~~vi~~~~~-h~s~~ka~~~~G~-------------~v~~v~~~~------~~~------~d~~~Le~~i~~--- 272 (541)
|-. +.++|.-..+ |-+...++...|. .+.++|... .+. -..++||+.|.+
T Consensus 133 G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~ 212 (449)
T COG0161 133 GQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGP 212 (449)
T ss_pred CCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCc
Confidence 322 3446655544 4444444333331 344444431 111 235677777764
Q ss_pred -CceEEEeecCCCC-CccccC----HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCC
Q 009181 273 -NTVLIVGSAPGFP-HGIIDP----IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDV 344 (541)
Q Consensus 273 -~t~~vv~~~~~~~-~G~id~----i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~ 344 (541)
+..++++...--. .|.+.| ++++.++|++||++|+.|++-.||-. .|. .|.....|| |++++.
T Consensus 213 ~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGR-----TG~---~FA~e~~gi~PDi~~~a- 283 (449)
T COG0161 213 ETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGR-----TGK---MFACEHAGIVPDILCLA- 283 (449)
T ss_pred ccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCc-----Cch---hhhhhhcCCCCCeeeec-
Confidence 3567777766655 676655 89999999999999999999988743 332 344455555 888876
Q ss_pred CCCCCCCC-CceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009181 345 HKYGLAPK-GTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESI 423 (541)
Q Consensus 345 hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l 423 (541)
|-+-+++ ..|+++++++-.. ..+ .+. .....+|..+.+...++.+++..+..-.-+..+++..++..+|
T Consensus 284 -KGLT~GY~Pl~a~l~~~~I~~-~~~-------~~~-~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l 353 (449)
T COG0161 284 -KGLTGGYLPLSAVLTSDRIYE-AFS-------DGD-AGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYL 353 (449)
T ss_pred -ccccccchhhHhHhhhHHHHH-HHh-------ccc-CCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 6542222 2444566554221 110 011 2233445555455668888888776555567788888999999
Q ss_pred HHHhhc-CCCeEEecCCC--eeEEEEecCC-CC---------HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHH
Q 009181 424 QKGIKE-IPELFIIGRPD--MTIVAFGSDV-VD---------IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVD 489 (541)
Q Consensus 424 ~~~L~~-~~~~~v~~~~~--~~~v~f~~~~-~~---------~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id 489 (541)
.+.|++ +++...+++.. ..+..+.+.. .+ ..++.+.+.++|..+.+++. .+-++++...+ +++|
T Consensus 354 ~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g~--~i~~~PPliit~~eid 431 (449)
T COG0161 354 QAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLGD--VIYLMPPLIITREEID 431 (449)
T ss_pred HHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecCC--EEEEcCCccCCHHHHH
Confidence 999987 54444554422 3333443321 11 45788889999998887743 67777776655 9999
Q ss_pred HHHHHHHHHHHHHHcC
Q 009181 490 VFLRDLRESVETVKQN 505 (541)
Q Consensus 490 ~~i~~L~~~~~~l~~~ 505 (541)
++++.+++++++..++
T Consensus 432 ~l~~~l~~al~~~~~~ 447 (449)
T COG0161 432 ELVDALREALDETLAD 447 (449)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999877654
No 325
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=1.6e-12 Score=137.41 Aligned_cols=296 Identities=18% Similarity=0.129 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhcCC-
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFNI- 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~G~- 248 (541)
+.+.++.+.++++++.+.+. + .|+++||||+..|++.+|.+. | +++|+.-..+|.. ...+....|.
T Consensus 84 ~~~~~la~~L~~~~p~~~~~----v--~f~~sGsEAve~AlklAr~~t----g--r~~ii~~~~~yHG~t~~a~s~~~~~ 151 (443)
T PRK08360 84 VEPLLLAEKLIEIAPGDNPK----V--SFGLSGSDANDGAIKFARAYT----K--RRKILSYLRSYYGSTYGAMSLTGLD 151 (443)
T ss_pred HHHHHHHHHHHHhCCCCCCE----E--EEcCCHHHHHHHHHHHHHHhc----C--CCeEEEEeCCcCCcCHHHHHhcCCC
Confidence 33456777788887544332 5 899999999999999998752 2 3567665544433 3233332221
Q ss_pred -----------eEEEeeCCCCCc------------cCHHHHHHhhc-----cCceEEEeecCCCCCccccC----HHHHH
Q 009181 249 -----------KLWRVPVDKEFR------------ADVKAIKKYIN-----RNTVLIVGSAPGFPHGIIDP----IQELG 296 (541)
Q Consensus 249 -----------~v~~v~~~~~~~------------~d~~~Le~~i~-----~~t~~vv~~~~~~~~G~id~----i~~I~ 296 (541)
.+..+|.....+ -+.+.+++.++ +++.+|++....+++|.+.+ +++|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~ 231 (443)
T PRK08360 152 FPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLK 231 (443)
T ss_pred cccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHH
Confidence 244454432111 12445666663 46889999888799998765 88999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTE 374 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~ 374 (541)
++|++||+++++|++|.++.. .|. .+.....| .|.+++ .|.+.++..+|+++.+. ++.......
T Consensus 232 ~l~~~~g~llI~DEv~~g~gr-----~G~---~~a~~~~~~~pDiitl--sK~l~~G~pigav~~~~-~i~~~~~~~--- 297 (443)
T PRK08360 232 KILDEHGILLVVDEVQSGLGR-----TGK---WFAIEHFGVEPDIITL--GKPLGGGLPISATIGRA-EIMDSLPPL--- 297 (443)
T ss_pred HHHHHcCCEEEEeccccCCCc-----Ccc---chhhhhcCCCCCEEEe--cccccCCceeEEEEEcH-HHHhhhcCC---
Confidence 999999999999999987643 111 01111112 266665 58865555588877653 333221100
Q ss_pred cCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecC--CCeeEEEEecCCC
Q 009181 375 WSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGR--PDMTIVAFGSDVV 451 (541)
Q Consensus 375 ~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~f~~~~~ 451 (541)
. ...+..+... ..++..++++.+..+ +..++..++.+++++.|+++ ....++.. ....++.+.+.+.
T Consensus 298 ---~--~~~T~~~~p~--~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~ 367 (443)
T PRK08360 298 ---A--HAFTLSGNPV--ASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKD 367 (443)
T ss_pred ---C--CCCCCCcCHH--HHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecC
Confidence 0 0111112211 133445555554333 45667777777777777653 11122221 2344444443211
Q ss_pred ---------CHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 452 ---------DIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 452 ---------~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
....+...+.++|+.+.... .+.+|++++..++ +++|++++.++++++.+.
T Consensus 368 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 368 RETKERAYEEAAKVVWRAWELGLIVTFFS-GNVLRIQPPLTIEKEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred CcccCccHHHHHHHHHHHHHCCeEEeecC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 13467788999998765432 4689998887666 999999999999998874
No 326
>PRK12403 putative aminotransferase; Provisional
Probab=99.59 E-value=7.9e-13 Score=140.50 Aligned_cols=302 Identities=18% Similarity=0.158 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCC-CCeEEecC-CccchHHHHHhhcC
Q 009181 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGIT-RPEMIIPV-SAHSAYDKAAQYFN 247 (541)
Q Consensus 170 ~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~-~~~vi~~~-~~h~s~~ka~~~~G 247 (541)
.+...++.+.++++++.+.+. + .++++||||+..|++.+|.+... .|-+ +..|+.-. ..|.+...+....|
T Consensus 97 ~~~~~~lae~L~~~~p~~~~~----v--~f~~SGseA~e~AiklAr~~~~~-~g~~~r~~ii~~~~~yHG~t~~~~s~s~ 169 (460)
T PRK12403 97 HPAVIELSELLFSLLPGHYSH----A--IYTNSGSEANEVLIRTVRRYWQV-LGKPQKKIMIGRWNGYHGSTLAATALGG 169 (460)
T ss_pred CHHHHHHHHHHHHhCCCCcCE----E--EEeCCcHHHHHHHHHHHHHHHHh-hCCCCCcEEEEECCCcCcccHhhhhcCC
Confidence 344556777888887643232 4 89999999999999999976422 1211 23343333 34766555555444
Q ss_pred Ce-----------EEEeeCCCCCc------------cCHHHHHHhhc----cCceEEEeecCCCCCccccC----HHHHH
Q 009181 248 IK-----------LWRVPVDKEFR------------ADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELG 296 (541)
Q Consensus 248 ~~-----------v~~v~~~~~~~------------~d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~----i~~I~ 296 (541)
.+ +..+|....++ .+.+++++.+. +++.+|++......-|.+.| +++|.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr 249 (460)
T PRK12403 170 MKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQ 249 (460)
T ss_pred CccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 32 33444221111 11355666653 35678888888777888877 99999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCC-CceEEEEeccccccccccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVT 373 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~ 373 (541)
++|++||++|++|++++||-. .|. .+.+...| .|++++ -|.+.+++ .+|+++.++ ++.......
T Consensus 250 ~lc~~~g~lLI~DEV~tGfGR-----tG~---~~a~e~~gv~PDiv~~--gK~lggG~~Piga~v~~~-~i~~~~~~~-- 316 (460)
T PRK12403 250 RICRQYDVLLCADEVIGGFGR-----TGE---WFAHEHFGFEPDTLSI--AKGLTSGYVPMGGLVLSK-RIAEALVEQ-- 316 (460)
T ss_pred HHHHHcCCEEEEeccccCCCc-----Cch---hhhhhhcCCCCCeEEE--cccccccccceEEEEECH-HHHHHHhcC--
Confidence 999999999999999987733 121 11112223 377775 48765554 567667654 332211100
Q ss_pred ccCCCccCCCcccCCCCCch---HHHHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHhhcC-CCeEEecC--CCeeEEEE
Q 009181 374 EWSGGLYVSPTVAGSRPGGL---IAGAWAALMSLGQEGYLENTKAIM-EVSESIQKGIKEI-PELFIIGR--PDMTIVAF 446 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~---~a~~~~al~~lg~~g~~~~~~~~~-~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~f 446 (541)
++ ....++..++. .++..++|+.+..+ +..++.. ++.++|++.|+++ ....++++ ....++.+
T Consensus 317 ---~~----~~~~~~T~~gnPl~~Aaala~L~~i~~~---~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gi 386 (460)
T PRK12403 317 ---GG----VFAHGLTYSGHPVAAAVAIANLKALRDE---GVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAAL 386 (460)
T ss_pred ---CC----ccccCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEE
Confidence 00 01122222222 23444455544433 3455554 6667777766542 12222222 12334444
Q ss_pred ecCC--C------C----HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 447 GSDV--V------D----IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 447 ~~~~--~------~----~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
.+.. . . ...+...+.++|..+...+ +.+|++++...+ +|+|++++.++++++++.
T Consensus 387 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~--~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 387 QFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL--GRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred EEccCccccccccchhHHHHHHHHHHHhCCEEEEecC--CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3321 1 1 2234556688997775432 358888876444 999999999999998875
No 327
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.59 E-value=1.7e-15 Score=150.36 Aligned_cols=240 Identities=23% Similarity=0.283 Sum_probs=157.0
Q ss_pred cccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH
Q 009181 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka 242 (541)
|...+.+.++|+ .+++++|.+.. +|+++||.|+.+++++... ++ +.|++...+|..+...
T Consensus 25 Yg~D~~~~~l~~----~i~~l~g~e~a--------~f~~sGT~An~~al~~~~~-----~~---~~vi~~~~aHi~~~E~ 84 (290)
T PF01212_consen 25 YGEDPTTARLEE----RIAELFGKEAA--------LFVPSGTMANQLALRAHLR-----PG---ESVICADTAHIHFDET 84 (290)
T ss_dssp TTSSHHHHHHHH----HHHHHHTSSEE--------EEESSHHHHHHHHHHHHHH-----TT---EEEEEETTEHHHHSST
T ss_pred cCCChhHHHHHH----HHHHHcCCCEE--------EEeCCCChHHHHHHHHHHh-----cC---Cceeccccceeeeecc
Confidence 545566665555 88899999742 7999999999999999874 55 7899999999876432
Q ss_pred ---HhhcCCeEEEeeCCCCCccCHHHHHHhhcc------CceEEEeecCCCCC-ccccC---HHHHHHHHHHcCCEEEEe
Q 009181 243 ---AQYFNIKLWRVPVDKEFRADVKAIKKYINR------NTVLIVGSAPGFPH-GIIDP---IQELGELALSHGTCLHVD 309 (541)
Q Consensus 243 ---~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~-G~id~---i~~I~~la~~~~i~lhvD 309 (541)
....|++++.++.+++|.+|+++|++++.+ ++.+|+++++++.. |++.+ +++|.++|++||++||.|
T Consensus 85 ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmD 164 (290)
T PF01212_consen 85 GAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMD 164 (290)
T ss_dssp THHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEE
T ss_pred chhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEe
Confidence 356799999999877799999999999975 47899999998853 77654 778999999999999999
Q ss_pred CCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCC
Q 009181 310 LCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSR 389 (541)
Q Consensus 310 ~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr 389 (541)
+|--.-... ..+. ...-...++|+++++++|.|.+|.| + +++.+++.+...... ....|+... .
T Consensus 165 GARl~~a~~---~~~~---~~~e~~~~~D~v~~~~tK~~g~~~G-a-vl~~~~~~i~~~~~~-~k~~gg~~~-------~ 228 (290)
T PF01212_consen 165 GARLANAAA---ALGV---SLAEIAAGADSVSFGGTKNGGAPGG-A-VLAGNKEFIAKARRQ-RKRLGGGMR-------Q 228 (290)
T ss_dssp ETTHHHHHC---HHHH---HHHHHHTTSSEEEEETTSTT-SSSE-E-EEEESHHHHHHHHHH-HHHHTHHHH-------H
T ss_pred hhhHHHhhh---cccc---cHHHHhhhCCEEEEEEEcccccccc-e-EEEechHHHHHHHHH-HHHhccCee-------e
Confidence 995222211 1111 0111236789999999999655553 4 455555533322111 111222100 0
Q ss_pred CCchHHH--HH--HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCee
Q 009181 390 PGGLIAG--AW--AALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMT 442 (541)
Q Consensus 390 ~~~~~a~--~~--~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~ 442 (541)
.| .+++ ++ .++ .+.+......++-.+++++|.+.|+.+ ++.+..++..+
T Consensus 229 ~G-~~~a~~~~~~~~l--~~l~~~~~~~~~~~~~A~~La~~l~~~-~~~~~~~~~tn 281 (290)
T PF01212_consen 229 AG-VLAAAELYQFAAL--RALELWLERARHANAMAKRLAAGLEAL-GGVLPRPVETN 281 (290)
T ss_dssp TT-HHHHHHHHHHHHH--CHEECSHHHHHCHHHHHHCHHHCHHEE-CEEEETTSS-H
T ss_pred cc-eeeeechhhHHHH--HHHHhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCc
Confidence 11 1222 11 222 122233677788889999999999998 55566665544
No 328
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.59 E-value=5.1e-13 Score=135.39 Aligned_cols=293 Identities=18% Similarity=0.214 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCc-cchHHHHHhhc
Q 009181 168 SVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSA-HSAYDKAAQYF 246 (541)
Q Consensus 168 ~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~-h~s~~ka~~~~ 246 (541)
..++.|-++.+++.++++.-+. + -|+++||||++.|++.+|.+.. +++|+.-+.+ |.+.+...--.
T Consensus 90 ~Pte~Ei~~Aell~~~~p~~e~-----v--rfvnSGTEAtmsAiRlARa~Tg------R~kIikF~G~YHG~~D~~lv~a 156 (432)
T COG0001 90 APTELEVELAELLIERVPSIEK-----V--RFVNSGTEATMSAIRLARAYTG------RDKIIKFEGCYHGHSDSLLVKA 156 (432)
T ss_pred CCCHHHHHHHHHHHHhcCcccE-----E--EEecchhHHHHHHHHHHHHhhC------CCeEEEEcCCCCCCccHHHhhc
Confidence 3467888888999999876332 4 7999999999999999987543 3667665554 44444433322
Q ss_pred -------------CC------eEEEeeCCCCCccCHHHHHHhhcc---CceEEEeecCCCCCccccC----HHHHHHHHH
Q 009181 247 -------------NI------KLWRVPVDKEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP----IQELGELAL 300 (541)
Q Consensus 247 -------------G~------~v~~v~~~~~~~~d~~~Le~~i~~---~t~~vv~~~~~~~~G~id~----i~~I~~la~ 300 (541)
|+ .++.+|.+ |++.+++++++ +..+|++...-.+.|.+.| +++|.++|+
T Consensus 157 gsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~ 231 (432)
T COG0001 157 GSGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTE 231 (432)
T ss_pred CcCcccCCCCCCCCCChhhhccEEEecCC-----CHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHH
Confidence 22 46667776 99999999975 5788999888888999977 789999999
Q ss_pred HcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCC
Q 009181 301 SHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGG 378 (541)
Q Consensus 301 ~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~ 378 (541)
+||+.||.|++..||-+++-.. ....|| |..++. |...++..+|+ +-..+++.+..-...+
T Consensus 232 e~G~lLI~DEViTGFR~~~gGa---------q~~~gi~PDlttlG--KiIGGGlP~ga-~gGr~eiM~~~~p~g~----- 294 (432)
T COG0001 232 EHGALLIFDEVITGFRVALGGA---------QGYYGVEPDLTTLG--KIIGGGLPIGA-FGGRAEIMEQLAPLGP----- 294 (432)
T ss_pred HcCcEEEEecchhhcccCCccc---------ccccCcCcchhhhh--hhhcCCcceee-eccHHHHHhhhCCCCC-----
Confidence 9999999999998876642111 122333 555544 88888888886 4444555543221111
Q ss_pred ccCCCcccCCCCCch--HHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHhhcC---CCeEEecCCCeeEEEEecCC--
Q 009181 379 LYVSPTVAGSRPGGL--IAGAWAALMSLGQ-EGYLENTKAIMEVSESIQKGIKEI---PELFIIGRPDMTIVAFGSDV-- 450 (541)
Q Consensus 379 ~~~~~~~~gsr~~~~--~a~~~~al~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~f~~~~-- 450 (541)
-.+.|+-+|.. +++-.++++.+.. ++ ..++..+++++|++.|++. -++.+......+.+.+.+.+
T Consensus 295 ----vyqaGT~sgnplamaAG~atl~~l~~~~~---~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~ 367 (432)
T COG0001 295 ----VYQAGTLSGNPLAMAAGLATLEELMTEEG---VYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEG 367 (432)
T ss_pred ----ccccCCCCCcHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCC
Confidence 12233333332 3455556655543 22 3445555555555555442 25554433344444444432
Q ss_pred C---------C---HHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHc
Q 009181 451 V---------D---IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 451 ~---------~---~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~~ 504 (541)
. + ..++...|.++|+.+...++. ..-+|..+ +.+|||+.+++++++++++..
T Consensus 368 ~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~e-a~flS~ah-te~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 368 VRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQFE-AGFLSTAH-TEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred CCCHHHHHhhchHHHHHHHHHHHhCCcccCCcccc-ceeeeccc-CHHHHHHHHHHHHHHHHHhhc
Confidence 1 1 223446889999988876643 23344432 349999999999999888764
No 329
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=3.2e-12 Score=134.55 Aligned_cols=296 Identities=19% Similarity=0.143 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH-HHHHhhcC---
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY-DKAAQYFN--- 247 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~-~ka~~~~G--- 247 (541)
...++.+.+++++..+..+ .+ .++++||||+..|++.+|.+. | +++|+.-..+|... ..+....|
T Consensus 84 ~~~~la~~l~~~~p~~~~~---~v--~f~~SGseA~e~AlklAr~~t----g--r~~ii~~~~~yHG~t~~~~~~~~~~~ 152 (425)
T PRK07495 84 NYVRLAERLNALVPGDFAK---KT--IFVTTGAEAVENAVKIARAAT----G--RSAVIAFGGGFHGRTFMGMSLTGKVV 152 (425)
T ss_pred HHHHHHHHHHHhCCCCCCC---EE--EECCchHHHHHHHHHHHHHhh----C--CCeEEEECCCcCCccHHHhhhcCCCc
Confidence 3445666777777533212 25 899999999999999998752 2 35677666554433 22222111
Q ss_pred ----------CeEEEeeCCCCC-cc----CHHHHHHhhc-----cCceEEEeecCCCCCccccC----HHHHHHHHHHcC
Q 009181 248 ----------IKLWRVPVDKEF-RA----DVKAIKKYIN-----RNTVLIVGSAPGFPHGIIDP----IQELGELALSHG 303 (541)
Q Consensus 248 ----------~~v~~v~~~~~~-~~----d~~~Le~~i~-----~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~ 303 (541)
..+..+|.+.+. .+ +.+++++.+. +++.+|++.......|.+.+ +++|.++|++||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g 232 (425)
T PRK07495 153 PYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHG 232 (425)
T ss_pred ccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 134556554311 12 2455677764 34678888777766775533 889999999999
Q ss_pred CEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccC
Q 009181 304 TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYV 381 (541)
Q Consensus 304 i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~ 381 (541)
+++++|+++.|+.. .|. .+.+...| .|.+++ .|.+.++..+|+++.+++ +..... . .. .
T Consensus 233 ~llI~DEv~tG~gr-----~G~---~~a~~~~gv~pDi~tl--sK~l~~G~pigav~~~~~-i~~~~~---~----~~-~ 293 (425)
T PRK07495 233 ILLIADEVQTGFAR-----TGK---LFAMEHHEVAADLTTM--AKGLAGGFPLAAVTGRAE-IMDAPG---P----GG-L 293 (425)
T ss_pred CEEEEechhhcCCc-----CCC---ceeecccCCCCCEEee--hhhhcCCccceEEEEcHH-HHhccC---C----CC-c
Confidence 99999999987633 121 11222223 366665 488666666888777543 322110 0 00 0
Q ss_pred CCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC----CCe-EEecCCCeeEEEEecCCC-----
Q 009181 382 SPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI----PEL-FIIGRPDMTIVAFGSDVV----- 451 (541)
Q Consensus 382 ~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~----~~~-~v~~~~~~~~v~f~~~~~----- 451 (541)
..+..|... ..++..++++.+..+ +..++..++.++|++.|+++ |.+ ++-+. ..++++.+.+.
T Consensus 294 ~~T~~~~pl--~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~--Gl~~~iel~~~~~~~~ 366 (425)
T PRK07495 294 GGTYGGNPL--GIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEIADIRGP--GFMNAVEFNDADSGLP 366 (425)
T ss_pred CCCCCCCHH--HHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC--ceEEEEEEecCCCCCc
Confidence 111111111 122333556555443 34556666666666666543 332 22222 44555554321
Q ss_pred C---HHHHHHHHHhCCceeccCCC-CCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 452 D---IFEVNDIMSSKGWHLNPLQR-PNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 452 ~---~~~l~~~l~~~G~~~~~~~~-~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
+ ...+.+.+.++|..+...+. ++.+|++++...+ +++|++++.|++++++++.
T Consensus 367 ~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~~ 424 (425)
T PRK07495 367 SAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDDVFAEALDILEASILEASA 424 (425)
T ss_pred cHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 1 34677888899987754332 4789998876555 9999999999999988753
No 330
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=2.2e-12 Score=136.44 Aligned_cols=294 Identities=21% Similarity=0.147 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhcCC-
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFNI- 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~G~- 248 (541)
+.+.++.+.+++++..+..+ .+ .|+++||||+..|++.+|.+. | +++|+.-..+|.. ..-+....|-
T Consensus 97 ~~~~~lAe~L~~~~p~~~~~---~v--~f~~SGsEA~e~AlklAr~~t----g--r~~Ii~~~~~yHG~t~~~ls~t~~~ 165 (441)
T PRK05769 97 EPAVELAERLVEIAPGGFEK---KV--FFTNSGTESNEAAIKIARYHT----G--RKYIIAFLGAFHGRTYGSLSLTASK 165 (441)
T ss_pred HHHHHHHHHHHHhCCCCCCC---EE--EECCchHHHHHHHHHHHHHHh----C--CCeEEEECCCcCCccHHHHHhcCCC
Confidence 34556777888877532112 24 899999999999999999652 2 3567766655444 3333332221
Q ss_pred ------------eEEEeeCCCCCc-------------cCHHHHHHhh-c-----cCceEEEeecCCCCCccccC----HH
Q 009181 249 ------------KLWRVPVDKEFR-------------ADVKAIKKYI-N-----RNTVLIVGSAPGFPHGIIDP----IQ 293 (541)
Q Consensus 249 ------------~v~~v~~~~~~~-------------~d~~~Le~~i-~-----~~t~~vv~~~~~~~~G~id~----i~ 293 (541)
.+..+|.....+ -+.+.+++.+ + +++.+|++.......|.+.| ++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~ 245 (441)
T PRK05769 166 PVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFK 245 (441)
T ss_pred cccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHH
Confidence 244455432111 1234466623 2 35788888888877888888 99
Q ss_pred HHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEeccccccccccc
Q 009181 294 ELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVA 371 (541)
Q Consensus 294 ~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~ 371 (541)
+|.++|++||+++++|+++.|+.. .|. .+.+...|+ |.++++ |.+.++...|+++.+++ +....
T Consensus 246 ~l~~l~~~~g~lli~DEv~tG~gr-----~G~---~~a~~~~gv~pDivt~~--K~l~~G~p~gav~~~~~-i~~~~--- 311 (441)
T PRK05769 246 ELRKLADKYGILLIDDEVQTGMGR-----TGK---MFAIEHFGVEPDIITLA--KAIAGGLPLGAVIGRAE-LMFLP--- 311 (441)
T ss_pred HHHHHHHHcCCEEEEechhhCCCc-----ccc---eehhhccCCCCCEEEEc--ccccCCcccEEEEEehh-hhhcC---
Confidence 999999999999999999987533 121 111122233 777654 77555566787776544 32110
Q ss_pred ccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCC-CeEEecC--CCeeEEEEec
Q 009181 372 VTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIP-ELFIIGR--PDMTIVAFGS 448 (541)
Q Consensus 372 ~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~~--~~~~~v~f~~ 448 (541)
.... ..+..|.. ...++..++++.+.. +..++..++.++|++.|+++. .+.++.. ....++.+.+
T Consensus 312 -~~~~-----~~T~~g~p--~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~ 379 (441)
T PRK05769 312 -PGSH-----ANTFGGNP--VAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVEL 379 (441)
T ss_pred -CCCC-----CCCCCcCH--HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEe
Confidence 0011 11222211 112344445544432 667777788888888886641 1222222 1234444444
Q ss_pred CCC-------CHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 449 DVV-------DIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 449 ~~~-------~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
.+. ....+.+.+.++|+.+...+ .+.+|++++..++ +|+|++++.+++++.++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~-~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 380 VKDRKEPDPKLRDKVLYEAFKRGLLLLGAG-KSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred ccCCccccHHHHHHHHHHHHhCCcEEecCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 221 13467788889998775433 3679999887655 99999999999998653
No 331
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.58 E-value=1e-12 Score=139.55 Aligned_cols=302 Identities=16% Similarity=0.139 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHhCCC----CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccchH-HHHHhhc
Q 009181 173 EAEVIAMTAALLGNK----EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAY-DKAAQYF 246 (541)
Q Consensus 173 e~ev~~~la~l~g~~----~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s~-~ka~~~~ 246 (541)
..++.+.+.+++... .-+ .+ .++++||||+..|++.+|.+...+ |. .+.+|+.-..+|... .-+....
T Consensus 109 ~~~lae~L~~~~p~~~~~~~~~---~v--~f~~sGSEAvE~AlKlAr~~~~~~-g~~~r~~ii~~~~syHG~t~gals~~ 182 (472)
T PRK08742 109 AVQLAEQLLAIAPRQDGRAPLS---KV--FYADNGSAGVEVALKMAFHYFHNR-GEHRRTRFIALENGYHGETIGALAVG 182 (472)
T ss_pred HHHHHHHHHHhCCCcccCCCCC---EE--EEeCCchHHHHHHHHHHHHHHHhc-CCCCCcEEEEECCCcCCCchhhhhcc
Confidence 445677777776431 111 25 899999999999999999875432 32 246777766655443 2333222
Q ss_pred CC------------eEEEeeCCCCCc------------cCHHHHHHhhc---cCceEEEeec-CCCCCccccC----HHH
Q 009181 247 NI------------KLWRVPVDKEFR------------ADVKAIKKYIN---RNTVLIVGSA-PGFPHGIIDP----IQE 294 (541)
Q Consensus 247 G~------------~v~~v~~~~~~~------------~d~~~Le~~i~---~~t~~vv~~~-~~~~~G~id~----i~~ 294 (541)
|. .+..+|....++ -+++.+++.++ +++.+|++.. .....|.+.+ +++
T Consensus 183 ~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~ 262 (472)
T PRK08742 183 DIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRR 262 (472)
T ss_pred CCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHH
Confidence 21 234444432111 13577777775 4577888877 3555677644 889
Q ss_pred HHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCC-CceEEEEeccccccccccc
Q 009181 295 LGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVA 371 (541)
Q Consensus 295 I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~ 371 (541)
+.++|++||+.||+|+++.||-. .|. .+.+...|+ |++++. |.+.+++ ..|+++.+++ +... +.
T Consensus 263 lr~lc~~~gillI~DEV~TGfGR-----tG~---~~a~e~~gv~PDiv~~g--Kgl~gG~~Plaav~~~~e-i~~~-~~- 329 (472)
T PRK08742 263 ARELCDAHGAFLIADEIATGFGR-----TGT---LFACEQAGVMPDLLCLS--KGLTGGFLPLSAVLATQQ-LYDA-FL- 329 (472)
T ss_pred HHHHHHHcCCEEEEechhhCCCC-----Ccc---chHHHhcCCCCCEEEEc--ccccCCCCCcceeeccHH-HHHH-hh-
Confidence 99999999999999999887743 121 122233344 888875 7765553 5776676654 2211 10
Q ss_pred ccccCCCccCCCcccCCCCCchH---HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEE
Q 009181 372 VTEWSGGLYVSPTVAGSRPGGLI---AGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAF 446 (541)
Q Consensus 372 ~~~~~~~~~~~~~~~gsr~~~~~---a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f 446 (541)
..... .....++..++.. ++..++++.+.+++ ..++..++.++|.+.++.+....++++ ....++.+
T Consensus 330 -~~~~~----~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~gi 401 (472)
T PRK08742 330 -DDSRE----RAFLHSHSYTGNPLACAAALATLDIFADDD---VIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAF 401 (472)
T ss_pred -ccCcc----CccCcCCCCCccHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEE
Confidence 00000 0111223332222 34444444444443 445555555666655544322222222 12334444
Q ss_pred ecCC--C-----C-----HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 447 GSDV--V-----D-----IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 447 ~~~~--~-----~-----~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
.+.. . . ...+.+.+.++|+.+...+ +.+|++++...+ +++|++++.|+++++++.
T Consensus 402 el~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g--~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 402 ELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLG--DVLYWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred EeccCccccccCCchhHHHHHHHHHHHHCCeEEEecC--CEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3321 1 0 2456778889998776543 689998886555 999999999999998764
No 332
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=1.9e-12 Score=137.09 Aligned_cols=298 Identities=16% Similarity=0.127 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCc-cchHHHHHhhcC--
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSA-HSAYDKAAQYFN-- 247 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~-h~s~~ka~~~~G-- 247 (541)
+.+.++.+.+++++.....+ .+ .|+++||||+..|++.+|.+. | +.+|+.-+.+ |-...-+....+
T Consensus 85 ~~~~~lae~L~~~~p~~~~~---~v--~f~~SGseA~e~AiklAr~~t----g--r~~ii~~~~~YHG~t~~als~s~~~ 153 (445)
T PRK08593 85 EPLVRLAKKLCELAPGDFEK---RV--TFGLSGSDANDGIIKFARAYT----G--RPYIISFTNAYHGSTYGSLSMSGIS 153 (445)
T ss_pred HHHHHHHHHHHHhCCCCCCC---EE--EECCchHHHHHHHHHHHHHhh----C--CCeEEEECCCcCCCcHHHHhhcCCC
Confidence 34455667788877533212 25 899999999999999998752 2 2556665554 544444433322
Q ss_pred -----------CeEEEeeCCCCCc-----cC-------HHHHHHhhc-----cCceEEEeecCCCCCccccC----HHHH
Q 009181 248 -----------IKLWRVPVDKEFR-----AD-------VKAIKKYIN-----RNTVLIVGSAPGFPHGIIDP----IQEL 295 (541)
Q Consensus 248 -----------~~v~~v~~~~~~~-----~d-------~~~Le~~i~-----~~t~~vv~~~~~~~~G~id~----i~~I 295 (541)
..+..+|..+.++ .+ ++++++.+. +++.+|++.......|.+.| +++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l 233 (445)
T PRK08593 154 LNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEAL 233 (445)
T ss_pred cccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHH
Confidence 1244455432211 11 245555442 46889999998888888866 9999
Q ss_pred HHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEeccccccccccccc
Q 009181 296 GELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVT 373 (541)
Q Consensus 296 ~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~ 373 (541)
.++|++||+++++|+++.||-. .|. .+.+...| .|++++ .|.+.++..+|+++.+++ +..... .
T Consensus 234 ~~lc~~~g~llI~DEv~tg~Gr-----tG~---~~a~~~~gv~pDi~t~--gK~l~~G~p~gav~~~~~-i~~~~~---~ 299 (445)
T PRK08593 234 YKFCREHGILFAVDDIQQGLGR-----TGK---WSSISHFNITPDLMSF--GKSLAGGMPMSAIVGRKE-IMESLE---A 299 (445)
T ss_pred HHHHHHcCCEEEEechhhCCCc-----Cch---HHHHHhcCCCCCEeee--cccccCCcccEEEEEcHH-HHhhhc---c
Confidence 9999999999999999976632 111 01111123 266665 477554455787776543 322110 0
Q ss_pred ccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecC--CCeeEEEEecC-
Q 009181 374 EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGR--PDMTIVAFGSD- 449 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~f~~~- 449 (541)
+. ...+..|.. ...++..++++.+..+ +..++..++.++|++.|+++ ....+++. ....++.+.+.
T Consensus 300 ----~~-~~~T~~~~p--l~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~ 369 (445)
T PRK08593 300 ----PA-HLFTTGANP--VSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVS 369 (445)
T ss_pred ----CC-CCCCCCCCH--HHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEec
Confidence 00 001111111 1133455555555433 46677777777777777653 11122222 11223333221
Q ss_pred -C----C---CHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 450 -V----V---DIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 450 -~----~---~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
. . ...++...+.++|+.+...+ ++.+|++++..++ +|+|++++.++++++++.+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~-~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 370 DKKLKTRDNEAALKICNYCFEHGVVIIAVA-GNVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred CCCcCCCcHHHHHHHHHHHHHCCeEEeccC-CCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 1 0 13567788999998775442 4689999987766 9999999999999988765
No 333
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.58 E-value=1.2e-12 Score=137.83 Aligned_cols=293 Identities=16% Similarity=0.139 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhcCC--
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFNI-- 248 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~G~-- 248 (541)
.+.++.+.+++++...... .+ .|+++||||+..|++.+|.+ .| +++|+.-..+|.. ...+....|.
T Consensus 84 ~~~~la~~l~~~~p~~~~~---~~--~f~~sGseA~e~AlklAr~~----tg--r~~ii~~~~~yHG~t~~~~s~~~~~~ 152 (421)
T PRK09792 84 SYVTLAEKINALAPVSGQA---KT--AFFTTGAEAVENAVKIARAH----TG--RPGVIAFSGGFHGRTYMTMALTGKVA 152 (421)
T ss_pred HHHHHHHHHHHhCCCCCCc---eE--EEeCChHHHHHHHHHHHHHh----cC--CCeEEEECCCcCCccHHHHhhcCCCc
Confidence 3445666777776432111 24 89999999999999999864 22 3567766655443 3333322221
Q ss_pred -----------eEEEeeCCCCCc-c----CHHHHHHhhc-----cCceEEEeecCCCCCcccc-C---HHHHHHHHHHcC
Q 009181 249 -----------KLWRVPVDKEFR-A----DVKAIKKYIN-----RNTVLIVGSAPGFPHGIID-P---IQELGELALSHG 303 (541)
Q Consensus 249 -----------~v~~v~~~~~~~-~----d~~~Le~~i~-----~~t~~vv~~~~~~~~G~id-~---i~~I~~la~~~~ 303 (541)
.+..+|...+.+ + +.+.+++.+. +++.+|+++...++.|... | +++|.++|++||
T Consensus 153 ~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g 232 (421)
T PRK09792 153 PYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHG 232 (421)
T ss_pred ccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 234444432111 2 3478888875 3578899998889999764 5 899999999999
Q ss_pred CEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCC
Q 009181 304 TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSP 383 (541)
Q Consensus 304 i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (541)
+++++|+++.|+.. .|... .+.......|.+++ .|.+.++..+|+++.+.+ +..... ...
T Consensus 233 ~llI~DEv~tg~gr-----~G~~~-a~~~~~~~pDi~t~--gK~l~~G~pigav~~~~~-i~~~~~---~~~-------- 292 (421)
T PRK09792 233 IVMIADEVQSGFAR-----TGKLF-AMDHYADKPDLMTM--AKSLAGGMPLSGVVGNAN-IMDAPA---PGG-------- 292 (421)
T ss_pred CEEEEeccccCCCC-----CCchh-HHHhcCCCCcEEEe--ehhhcCCCceEEEEEcHH-HHhccC---CCC--------
Confidence 99999999988743 12100 11111112365555 488766677888766543 322110 000
Q ss_pred cccCCCCCchHHHHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecCC-C-eeEEEEecCCC------
Q 009181 384 TVAGSRPGGLIAGAW---AALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGRP-D-MTIVAFGSDVV------ 451 (541)
Q Consensus 384 ~~~gsr~~~~~a~~~---~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~-~-~~~v~f~~~~~------ 451 (541)
.++..+....++. ++++.+..+ +..++..++.+++.+.|+++ ..+..+..+ . ..++++.+.+.
T Consensus 293 --~~~T~~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~~~~ 367 (421)
T PRK09792 293 --LGGTYAGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPS 367 (421)
T ss_pred --cCCCCCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCccCCcc
Confidence 1111111222444 555555433 45566666677777766553 111112222 2 45666665432
Q ss_pred --CHHHHHHHHHhCCceeccC-CCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 009181 452 --DIFEVNDIMSSKGWHLNPL-QRPNSIHICVTL-QHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 452 --~~~~l~~~l~~~G~~~~~~-~~~~~iRi~~~~-~~~e~id~~i~~L~~~~~ 500 (541)
....+...+.++|+.+... ..++.+|++++. .+.++++++++.|.++++
T Consensus 368 ~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 368 AAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred hHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 2456788899999877432 235789999887 445999999999998874
No 334
>PRK07480 putative aminotransferase; Validated
Probab=99.58 E-value=9.6e-13 Score=139.57 Aligned_cols=302 Identities=17% Similarity=0.130 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccch-HHHHHhhcCC
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSA-YDKAAQYFNI 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s-~~ka~~~~G~ 248 (541)
....++.+.++++++.+.+. + .++++||||+..|++.+|.+... +|. .+++|+.-..+|.. ...+....|.
T Consensus 94 ~~~~~lae~L~~~~p~~~~~----v--~f~~SGseA~e~AlklAr~~~~~-~g~~~r~~ii~~~~~yHG~tl~a~s~~g~ 166 (456)
T PRK07480 94 PPAIELAAKLAEVAPPGFNH----V--FFTNSGSEANDTVLRMVRHYWAL-KGKPQKKVIISRKNGYHGSTVAGASLGGM 166 (456)
T ss_pred HHHHHHHHHHHHhCCCCcCE----E--EEeCCcHHHHHHHHHHHHHHHHh-cCCCCCcEEEEECCCcCCcchhhhhccCC
Confidence 44455677788877533232 4 89999999999999999976432 232 14567765554433 3222222221
Q ss_pred ------------eEEEeeCCCCCc----cC--------HHHHHHhhc----cCceEEEeecCCCCCccccC----HHHHH
Q 009181 249 ------------KLWRVPVDKEFR----AD--------VKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELG 296 (541)
Q Consensus 249 ------------~v~~v~~~~~~~----~d--------~~~Le~~i~----~~t~~vv~~~~~~~~G~id~----i~~I~ 296 (541)
.+..++....++ .+ .+++++.+. +++.+|++.......|.+.+ +++|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr 246 (456)
T PRK07480 167 KYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQ 246 (456)
T ss_pred hhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHH
Confidence 122333211110 11 366666553 45788888888777788766 89999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCC-CceEEEEeccccccccccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVT 373 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~ 373 (541)
++|++||+.+++|+++.||-. .|. .+.+...|+ |.++++ |.+.+++ .+|+++.+++ +..... ...
T Consensus 247 ~lc~~~g~llI~DEV~tGfGR-----tG~---~~a~~~~gv~PDiv~~g--K~l~gG~~Pi~av~~~~~-i~~~~~-~~~ 314 (456)
T PRK07480 247 RICRKYDILLVADEVICGFGR-----TGE---WFGSQHFGIKPDLMTIA--KGLTSGYIPMGAVGVGDR-VAEVLI-EEG 314 (456)
T ss_pred HHHHHcCCEEEEechhhCCCc-----Ccc---hhhhhhcCCCCCeeeee--hhhccCCccceEEEEcHH-HHHHHh-cCC
Confidence 999999999999999977632 221 122223344 777764 8654443 4676777544 322110 000
Q ss_pred ccCCCccCCCcccCCCCCchH---HHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHhhcCCCeEEecC--CCeeEEEEe
Q 009181 374 EWSGGLYVSPTVAGSRPGGLI---AGAWAALMSLGQEGYLENTKAI-MEVSESIQKGIKEIPELFIIGR--PDMTIVAFG 447 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~~---a~~~~al~~lg~~g~~~~~~~~-~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~ 447 (541)
+ ....++..++.. ++..++|+.+.++ +..++. .++.++|.+.|+++....++++ ....++.+.
T Consensus 315 ----~----~~~~~~T~~gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie 383 (456)
T PRK07480 315 ----G----EFNHGFTYSGHPVAAAVALANLRILRDE---GIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIE 383 (456)
T ss_pred ----C----CcccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEE
Confidence 0 011122222223 3444455444433 345555 3666777777665422222211 112333333
Q ss_pred cCC--C------C----HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 448 SDV--V------D----IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 448 ~~~--~------~----~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
+.+ . + ...+.+.+.++|+.+...+ +.+|++++...+ +|+|++++.|+++++++.+
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~--~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 384 LVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVG--DRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred EeccccccccCcchhhHHHHHHHHHHHCCcEEeecC--CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 311 1 1 1456678889998775432 579998876544 9999999999999988755
No 335
>PRK07036 hypothetical protein; Provisional
Probab=99.58 E-value=1.7e-12 Score=138.00 Aligned_cols=308 Identities=19% Similarity=0.160 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccchH-HHHHhhcCC
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAY-DKAAQYFNI 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s~-~ka~~~~G~ 248 (541)
+.+.++.+.+.+++..+.+. + .|+++||||+..|++.+|.+... +|. .+.+|+.-..+|... .-+....|-
T Consensus 95 ~~~~~lae~L~~~~p~~~~~----v--~f~~sGseAve~AlklAr~~~~~-~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~ 167 (466)
T PRK07036 95 APAAELAAKLAELAPGDLNH----V--FLTTGGSTAVDSALRFVHYYFNV-RGRPAKKHIITRGDAYHGSTYLTASLTGK 167 (466)
T ss_pred HHHHHHHHHHHHhCCCCcCE----E--EEeCCchHHHHHHHHHHHHHHHh-cCCCCccEEEEEcCccCCccHhhhcccCC
Confidence 34455677777776433222 4 89999999999999999875432 231 245677665554443 222222221
Q ss_pred ------------eEEEeeCCCCC----cc--------CHHHHHHhhc----cCceEEEeecCCCCCccccC----HHHHH
Q 009181 249 ------------KLWRVPVDKEF----RA--------DVKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELG 296 (541)
Q Consensus 249 ------------~v~~v~~~~~~----~~--------d~~~Le~~i~----~~t~~vv~~~~~~~~G~id~----i~~I~ 296 (541)
.+..+|....+ .+ ..+.+++.+. +++.+|++.......|.+.| +++|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr 247 (466)
T PRK07036 168 AADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMR 247 (466)
T ss_pred CcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHH
Confidence 23444432211 11 1344566553 45788999988877888776 89999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcC-CCC--ceEEEeCCCCCCCCCC-CceEEEEecccccccccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS-VQG--VTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAV 372 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~-~~g--vdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~ 372 (541)
++|++||+++++|+++.||-. .|. .+.+. ..| .|+++++ |.+.+++ .+|+++.+++ +..... .
T Consensus 248 ~lc~~~g~llI~DEV~tGfGR-----tG~---~~~~~~~~gv~PDivt~g--K~l~gG~~Pi~av~~~~~-i~~~~~-~- 314 (466)
T PRK07036 248 EICRRYDILYISDEVVTGFGR-----LGH---FFASEAVFGIQPDIITFA--KGLTSGYQPLGAVIISER-LLDVIS-G- 314 (466)
T ss_pred HHHHHcCCEEEEeechhCCCc-----Cch---hhhhhhhcCCCCCEEEEc--cccccCccccEEEEEcHH-HHHHHh-c-
Confidence 999999999999999977732 110 01111 123 3777764 8755553 5777777644 322110 0
Q ss_pred cccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEEecCC
Q 009181 373 TEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAFGSDV 450 (541)
Q Consensus 373 ~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~~~~ 450 (541)
....+.. ...|+..++...++.+++..+..-.-.+..++..++.++|++.|+++....+++. ....++.+.+..
T Consensus 315 ~~~~~~~----~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~ 390 (466)
T PRK07036 315 PNAKGNV----FTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVA 390 (466)
T ss_pred ccCcCcc----cccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEcc
Confidence 0000000 1122222222334444444443222235677888888888888876532222221 113344443321
Q ss_pred --C-------C---HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 451 --V-------D---IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 451 --~-------~---~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
. + ...+.+.+.++|+.+...+ +.+|++++...+ +|+|++++.+.++++++.+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~--~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~ 455 (466)
T PRK07036 391 DKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE--HLCVLSPPLIITRAQIDEIVAILRAAIEETAD 455 (466)
T ss_pred CccccCCCCchhHHHHHHHHHHHHCCcEEeecC--CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 2467788899998775443 578888776544 9999999999999877643
No 336
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.57 E-value=1.6e-12 Score=136.75 Aligned_cols=303 Identities=12% Similarity=0.087 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC-CCCCeEEecCCccch-HHHHHhhcC--
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG-ITRPEMIIPVSAHSA-YDKAAQYFN-- 247 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G-i~~~~vi~~~~~h~s-~~ka~~~~G-- 247 (541)
.+.++.+.+++++..+.+. + .|+++||||+..|++.+|.+... +| -.+.+|+.-..+|.. ...+....|
T Consensus 88 ~~~~lae~L~~~~p~~~~~----v--~f~~sGseAve~AlklAr~~~~~-~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~ 160 (429)
T PRK06173 88 PAVELAQKLLEILPPSLNK----I--FFADSGSVAVEVAMKMALQYQQA-KGEVQRTKFATIRSGYHGDTWHAMSVCDPV 160 (429)
T ss_pred HHHHHHHHHHhhCCCCcCE----E--EEeCCchHHHHHHHHHHHHHHHH-hCCCCCcEEEEECCCcCCcchhhhccCCCc
Confidence 3455667777776432232 5 89999999999999999976432 22 124567766655443 222222211
Q ss_pred -----------CeEEEeeCCCCC------ccCHHHHHHhhc---cCceEEEeecC-CCCCccccC----HHHHHHHHHHc
Q 009181 248 -----------IKLWRVPVDKEF------RADVKAIKKYIN---RNTVLIVGSAP-GFPHGIIDP----IQELGELALSH 302 (541)
Q Consensus 248 -----------~~v~~v~~~~~~------~~d~~~Le~~i~---~~t~~vv~~~~-~~~~G~id~----i~~I~~la~~~ 302 (541)
..+..+|..... .-+++.+++.+. +++.+|++... ...-|.+.+ +++|.++|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~ 240 (429)
T PRK06173 161 TGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY 240 (429)
T ss_pred hhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc
Confidence 012334432110 124677788885 45778888874 666677643 88999999999
Q ss_pred CCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCC-CceEEEEecccccccccccccccCCCc
Q 009181 303 GTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVTEWSGGL 379 (541)
Q Consensus 303 ~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~~~~~~~ 379 (541)
|+++++|+++.|+-. .|. .+.+...| .|++++ -|.+.++. .+|.++.+++ +..... ... ....
T Consensus 241 g~llI~DEv~tG~Gr-----tG~---~~a~~~~gv~PDiv~~--gK~l~gG~~p~~a~~~~~~-i~~~~~-~~~--~~~~ 306 (429)
T PRK06173 241 GVLLIFDEIATGFGR-----TGK---LFALEHAGVVPDIMCI--GKALTGGYLTLSATITTEA-IAQTIC-SGE--AKCF 306 (429)
T ss_pred CCeEEecchhcCCCc-----CCc---chHHHhcCCCCCEEEe--ehhhhCCccccceEEecHH-HHHHHh-cCC--CCcc
Confidence 999999999866522 221 11111223 377774 58755543 4566666543 222110 000 0000
Q ss_pred cCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEEecCCC-CHHHH
Q 009181 380 YVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAFGSDVV-DIFEV 456 (541)
Q Consensus 380 ~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~~~~~-~~~~l 456 (541)
..+.+..|. -...++..++++.+.++ +..++..++.++|++.|+++.++..+++ ....++.+.+.+. +...+
T Consensus 307 ~~~~T~~g~--p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~~~~~i 381 (429)
T PRK06173 307 MHGPTFMAN--PLACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPVNMATL 381 (429)
T ss_pred ccCCCCCcC--HHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcccHHHH
Confidence 001111121 11234555566655443 3477778888888888875423332322 2345555655433 46788
Q ss_pred HHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 457 NDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 457 ~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
.+.|.++|+.+...+ +.+|+.++...+ +|++++++.|++++.++
T Consensus 382 ~~~l~e~Gi~v~~~g--~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 382 QPRFVEHGIWVRPFG--KLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred HHHHHHCCeEEEecC--CEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 999999998876554 589998886555 99999999999999764
No 337
>PRK06062 hypothetical protein; Provisional
Probab=99.57 E-value=1.1e-12 Score=138.90 Aligned_cols=296 Identities=19% Similarity=0.163 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhcCC-
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFNI- 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~G~- 248 (541)
+...++.+.++++...+.+. + .|+++||||+..|++.+|.+. | +++|+.-..+|.. ...+....|.
T Consensus 95 ~~~~~lae~L~~~~p~~~~~----v--~f~~SGsEAve~AlklAr~~t----g--r~~ii~~~~~yHG~t~~als~~~~~ 162 (451)
T PRK06062 95 DARSEAARLIAERAPGDLSK----V--FFTNGGADANEHAVRMARLHT----G--RPKVLSAYRSYHGGTGSAINLTGDP 162 (451)
T ss_pred HHHHHHHHHHHHhCCCCCCE----E--EEcCChHHHHHHHHHHHHHhh----C--CceEEEEeCCCCCCCHHHHhhcCCc
Confidence 33455666777776432222 5 899999999999999999752 2 3567766655444 3333333221
Q ss_pred ----------eEEEeeCCCCCc------cC-------HHHHHHhhc----cCceEEEeecCCCCCccccC----HHHHHH
Q 009181 249 ----------KLWRVPVDKEFR------AD-------VKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELGE 297 (541)
Q Consensus 249 ----------~v~~v~~~~~~~------~d-------~~~Le~~i~----~~t~~vv~~~~~~~~G~id~----i~~I~~ 297 (541)
.+..++....++ -| ++++++.++ +++.+|++......-|.+.| +++|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~ 242 (451)
T PRK06062 163 RRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRE 242 (451)
T ss_pred ccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHH
Confidence 123333221111 12 677888885 35688888888877888887 999999
Q ss_pred HHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCC-CceEEEEecccccccccccccc
Q 009181 298 LALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVTE 374 (541)
Q Consensus 298 la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~~ 374 (541)
+|++||++|++|+++.||-. .|. .+.+...| .|++++. |.+.+++ ..|+++.++ ++..... ...
T Consensus 243 lc~~~g~lLI~DEV~tGfGR-----tG~---~~a~~~~gv~PDi~t~g--K~lggG~~Pigav~~~~-~i~~~~~--~~~ 309 (451)
T PRK06062 243 LCDRHGIVLIADEVMAGFGR-----TGK---WFAIEHFGVVPDLITFA--KGVNSGYVPLGGVAISE-AIAATFA--DRP 309 (451)
T ss_pred HHHHcCCEEEeeccccCCCc-----CcH---HHHHHhcCCCCCeeeec--hhhhcCCcCcEEEEEcH-HHHHHhc--cCC
Confidence 99999999999999988632 111 01111122 3777654 8865553 567777765 3332110 001
Q ss_pred cCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHH-HHHHHHhhcC----CCe-EEecCCCeeEEEEec
Q 009181 375 WSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVS-ESIQKGIKEI----PEL-FIIGRPDMTIVAFGS 448 (541)
Q Consensus 375 ~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a-~~l~~~L~~~----~~~-~v~~~~~~~~v~f~~ 448 (541)
+.. ..+..|. -...++..++|+.+..++ ..++..++. +++++.|+++ |.+ .+-+. ..++.+.+
T Consensus 310 ~~~----~~T~~gn--pl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~--Gl~~gve~ 378 (451)
T PRK06062 310 YPG----GLTYSGH--PLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEVRGL--GVFWALEL 378 (451)
T ss_pred CCC----CCCCCCC--HHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEecc--ccEEEEEE
Confidence 110 0111121 111334555555554443 455555554 4666655543 322 22222 23333332
Q ss_pred C--CC-------------CHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 449 D--VV-------------DIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 449 ~--~~-------------~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
. .. ....+.+.|.++|+.+... .+.+|++++..++ +|+|++++.++++++++..
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~--~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 379 VADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN--GNRIHVVPPCTVTEDEVREGLAILDAALAVADA 448 (451)
T ss_pred cccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec--CCEEEEECCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 1 10 1346778899999876432 3579999877666 9999999999999987653
No 338
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.57 E-value=2.1e-12 Score=136.87 Aligned_cols=298 Identities=14% Similarity=0.119 Sum_probs=173.9
Q ss_pred HHHHHHHHHHHHHhCCC--CCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH-HHHHhhcC
Q 009181 171 RFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY-DKAAQYFN 247 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~--~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~-~ka~~~~G 247 (541)
+...++.+.+++++... ... + -.++++||||+..|++.+|.+. | +++|+....+|... .-+....|
T Consensus 82 ~~~~~lae~L~~~~p~~~~~~~----~-~f~~~sGsEA~e~AlklAr~~t----g--r~~Ii~~~~~yHG~t~~~~s~t~ 150 (442)
T TIGR00709 82 PLKDAFIEALLNIIPKRKMDYK----L-QFPGPSGADAVEAAIKLAKTYT----G--RTNVISFSGGFHGMTIGALAVTG 150 (442)
T ss_pred HHHHHHHHHHHHhCCCcCCCcc----E-EEeCCCHHHHHHHHHHHHHHhc----C--CCeEEEEcCCcCCchHHHHhhcC
Confidence 44555777888887532 112 2 1456899999999999999762 2 35677766655443 33333322
Q ss_pred ------------CeEEEeeCCCCCcc--------C----HHHHHHhhc------cCceEEEeecCCCCCccccC----HH
Q 009181 248 ------------IKLWRVPVDKEFRA--------D----VKAIKKYIN------RNTVLIVGSAPGFPHGIIDP----IQ 293 (541)
Q Consensus 248 ------------~~v~~v~~~~~~~~--------d----~~~Le~~i~------~~t~~vv~~~~~~~~G~id~----i~ 293 (541)
..+..+|.....+. + .+.+++.+. +++.+|++.......|.+.+ ++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~ 230 (442)
T TIGR00709 151 NLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQ 230 (442)
T ss_pred ChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHH
Confidence 12344444322221 1 122344443 35678888877777777643 88
Q ss_pred HHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEeccccccccccc
Q 009181 294 ELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVA 371 (541)
Q Consensus 294 ~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~ 371 (541)
+|.++|++||++++.|+++.||.. .|. .+.+...|+ |++++ .|.+.++..+|+++.+++ ... +.
T Consensus 231 ~lr~lc~~~g~llI~DEV~tGfGR-----tG~---~~a~~~~gv~PDiv~~--gK~l~~G~Pigav~~~~~-~~~--~~- 296 (442)
T TIGR00709 231 KIREVTRKHDIKLILDEVQAGFGR-----SGT---MFAFEHAGIEPDFVVM--SKAVGGGLPLAVLLIAPE-FDA--WQ- 296 (442)
T ss_pred HHHHHHHHcCCEEEEeccccCCCC-----CCc---hhHHHHcCCCCcEEEE--cccccCCcccEEEEEchH-Hhc--cC-
Confidence 999999999999999999988743 111 111112233 77775 487655567888887654 311 10
Q ss_pred ccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecC--CCeeEEEEec
Q 009181 372 VTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGR--PDMTIVAFGS 448 (541)
Q Consensus 372 ~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~f~~ 448 (541)
. . ..++..++..+++.+++..+..-.-.+..++..++.++|.+.|+++ ....++++ ....++.+.+
T Consensus 297 -~----~------~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~ 365 (442)
T TIGR00709 297 -P----A------GHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMI 365 (442)
T ss_pred -C----C------cCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEE
Confidence 0 0 0112222223344444444322111245667777778888877753 12222222 1234444433
Q ss_pred CCC---------------CHHHHHHHHHhCCceeccCC-CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 449 DVV---------------DIFEVNDIMSSKGWHLNPLQ-RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 449 ~~~---------------~~~~l~~~l~~~G~~~~~~~-~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
.+. -...+...+.++|..+...+ ..+.+|+.++...+ ++++++++.++++++++.+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 438 (442)
T TIGR00709 366 VDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQEECEEGISRFKQAVEEALA 438 (442)
T ss_pred ccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 211 13456778889998775433 24789998887666 9999999999999977643
No 339
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=1.7e-12 Score=124.72 Aligned_cols=294 Identities=17% Similarity=0.211 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCe-EEec-CCc-c-----------
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPE-MIIP-VSA-H----------- 236 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~-vi~~-~~~-h----------- 236 (541)
....+..+.+.++||.+. + +-++.|.||+..|++.+|.|....++|.+++ ++++ ... |
T Consensus 101 d~~~~f~~~vt~lf~~~k------v--lpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~ 172 (427)
T KOG1402|consen 101 DVLGEFAEYVTKLFGYDK------V--LPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLST 172 (427)
T ss_pred hhHHHHHHHHHHhcCcce------e--eecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecC
Confidence 344456778999999985 3 5677789999999999999998888887543 2222 221 1
Q ss_pred -c-hHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc-CceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEe
Q 009181 237 -S-AYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVD 309 (541)
Q Consensus 237 -~-s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD 309 (541)
+ ++++.--.+-..+..||.+ |.++|+.++++ +.+.+++...+-.-|++-| ++++.+||.||+++++.|
T Consensus 173 d~ds~~~fgp~~P~~~~~v~Y~-----d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~D 247 (427)
T KOG1402|consen 173 DPDSWDGFGPFLPGVVDKVPYG-----DAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIAD 247 (427)
T ss_pred CcchhhccCCCCCCcceeeccC-----CHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEeh
Confidence 1 2333322222347777776 89999999975 6778888888888898865 899999999999999999
Q ss_pred CCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCC-CCCCCceEEEEecccccccccccccccCCCccCCCcccCC
Q 009181 310 LCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGS 388 (541)
Q Consensus 310 ~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~-~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs 388 (541)
+.+.|... .|. .-..++..-..|.+.+. |.+ +|-+..++++..++-.. ...|..+|+
T Consensus 248 EvQTGl~R-----TGk-~la~d~env~PDivilg--KalSGG~~Pvsavl~~~~im~--------------~~~pgeHgs 305 (427)
T KOG1402|consen 248 EVQTGLAR-----TGK-LLACDYENVRPDIVILG--KALSGGVYPVSAVLADDDIML--------------NIKPGEHGS 305 (427)
T ss_pred hhhhcccc-----cCc-EEEeehhhcCCCeEEEe--ccccCCeeeeEEEEecHHHHh--------------ccCCCcccc
Confidence 99977643 222 10123333334777664 543 33345666565443222 124555778
Q ss_pred CCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCC-e-----EEecCCCeeEEEEecCC---CCHHHHHHH
Q 009181 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPE-L-----FIIGRPDMTIVAFGSDV---VDIFEVNDI 459 (541)
Q Consensus 389 r~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~-~-----~v~~~~~~~~v~f~~~~---~~~~~l~~~ 459 (541)
..|....++..++..+..-.-+++.++...+...|+.+|.+++. + ++-+..-..-+.|.... .+..+++-.
T Consensus 306 TyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~ 385 (427)
T KOG1402|consen 306 TYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLA 385 (427)
T ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccccchhHHHHHHc
Confidence 88877778877777776666678899999999999999988632 1 12222223444454322 367888888
Q ss_pred HHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHH
Q 009181 460 MSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVE 500 (541)
Q Consensus 460 l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~ 500 (541)
|.++|....+.. .+.+|++.+...+ +|+++-++.+++++.
T Consensus 386 lk~~g~LAkptH-~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 386 LKENGLLAKPTH-GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred ccccccccCCCC-CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 999987655544 4589998876544 999999999988763
No 340
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.57 E-value=2.3e-12 Score=136.92 Aligned_cols=306 Identities=14% Similarity=0.098 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccchH-HHHHhhcCC
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAY-DKAAQYFNI 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s~-~ka~~~~G~ 248 (541)
+...++.+.+++++..+.+. + .++++||||+..|++.+|.+... +|. .+.+|+.-..+|... ..+....|-
T Consensus 90 ~~~~~lae~L~~~~p~~~~~----v--~f~~sGsEAve~AlKlAr~~~~~-~g~t~r~~ii~~~~~yHG~t~ga~s~~~~ 162 (466)
T PRK07030 90 EPVIELSERLVKITPPGLSR----C--FYADNGSSAIEVALKMSFHYWRN-RGKPRKKRFVTLTNSYHGETLAAMSVGDV 162 (466)
T ss_pred HHHHHHHHHHHHhCCCCcCE----E--EEeCCcHHHHHHHHHHHHHHHHH-hCCCCCcEEEEECCCcCcccHHHHhccCC
Confidence 44556777888876432222 5 89999999999999999976432 121 245677666655443 333332221
Q ss_pred ------------eEEEeeCCCCCc------------cCHHHHHHhhc---cCceEEEeec-CCCCCccccC----HHHHH
Q 009181 249 ------------KLWRVPVDKEFR------------ADVKAIKKYIN---RNTVLIVGSA-PGFPHGIIDP----IQELG 296 (541)
Q Consensus 249 ------------~v~~v~~~~~~~------------~d~~~Le~~i~---~~t~~vv~~~-~~~~~G~id~----i~~I~ 296 (541)
.+..+|....++ -+++++++.++ +++.+|++.. .....|.+.+ +++|.
T Consensus 163 ~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr 242 (466)
T PRK07030 163 ALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLR 242 (466)
T ss_pred ccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHH
Confidence 233444322111 13566788775 4577888887 4555677654 88999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCC-CceEEEEeccccccccccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVT 373 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~ 373 (541)
++|++||+.+++|+++.||-. .|. .+.+...|| |++++. |.+.+++ ..|+++.+++ +..... .
T Consensus 243 ~lc~~~g~llI~DEV~TGfGR-----tG~---~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~e-i~~~~~---~ 308 (466)
T PRK07030 243 EACDRYGVHLIHDEIAVGFGR-----TGT---MFACEQAGIRPDFLCLS--KALTGGYLPLAAVLTTDT-VYQAFY---D 308 (466)
T ss_pred HHHHHcCCEEEEeehhhCcCc-----ccc---chHHHhcCCCCCEEeee--hhccCCcccceEEEecHH-HHHHHh---c
Confidence 999999999999999877632 111 122223343 888874 7755553 5777776544 322110 0
Q ss_pred ccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEEecCC-
Q 009181 374 EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAFGSDV- 450 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~~~~- 450 (541)
.... ......++..++..+++.+++..+..-.-.+..++..++.++|++.|+++.....+++ ....++.+.+..
T Consensus 309 ~~~~---~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~ 385 (466)
T PRK07030 309 DYPT---LRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQD 385 (466)
T ss_pred cccc---ccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccC
Confidence 0000 0011122232222334444443332222235667777888888888876522222221 123344444321
Q ss_pred -C-------C---HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 451 -V-------D---IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 451 -~-------~---~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
. + ..++.+.+.++|..+...+ +.+|+.++...+ +|++++++.++++++++
T Consensus 386 ~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g--~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 386 KASKTPYPWQERRGLKVYQHALERGALLRPLG--SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred ccccccCcchhHHHHHHHHHHHHCCeEEEecC--CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 0 1 2367788889998775543 579998776555 99999999999999988
No 341
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.56 E-value=1.5e-12 Score=136.80 Aligned_cols=299 Identities=16% Similarity=0.133 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccch-HHHHHhhcCC--
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSA-YDKAAQYFNI-- 248 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s-~~ka~~~~G~-- 248 (541)
..++.+.++++++.+.+. + .++++||||+..|++.+|.+.... |. .+.+|+.-..+|.. ..-+....+-
T Consensus 85 ~~~lae~L~~~~p~~~~~----v--~f~~SGseA~e~AlklAr~~~~~~-g~~~r~~ii~~~~~yHG~t~~als~~~~~~ 157 (422)
T PRK05630 85 AIKLTRKLLNLTDNGLDH----V--FYSDSGSVSVEVAIKMALQYSKGQ-GHPERTRLLTWRSGYHGDTFAAMSVCDPEG 157 (422)
T ss_pred HHHHHHHHHhhCCCCcCE----E--EEeCCcHHHHHHHHHHHHHHHHhc-CCCCCcEEEEECCCcCCccHHHhccCCCcc
Confidence 345666777776432222 5 899999999999999999864321 22 24667766655443 3333332221
Q ss_pred -----------eEEEeeCCCCCccC-------HHHHHHhhccCceEEEeecC-CCCCccccC----HHHHHHHHHHcCCE
Q 009181 249 -----------KLWRVPVDKEFRAD-------VKAIKKYINRNTVLIVGSAP-GFPHGIIDP----IQELGELALSHGTC 305 (541)
Q Consensus 249 -----------~v~~v~~~~~~~~d-------~~~Le~~i~~~t~~vv~~~~-~~~~G~id~----i~~I~~la~~~~i~ 305 (541)
....+|.......+ .+.+++.+.+++.+|++... ....|.+.| +++|.++|++||++
T Consensus 158 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~l 237 (422)
T PRK05630 158 GMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDIL 237 (422)
T ss_pred cccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 23334433211111 34566666677888888874 655676533 88999999999999
Q ss_pred EEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCC-CCceEEEEecccccccccccccccCCCccCC
Q 009181 306 LHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYVS 382 (541)
Q Consensus 306 lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p-~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~ 382 (541)
+++|+++.|+-. .|. .+.+...|+ |++++ -|.+.++ ...|+++.+++ +..... .. +..+
T Consensus 238 lI~DEv~tG~Gr-----tG~---~~a~~~~gv~PDi~t~--gK~l~gG~~p~~av~~~~~-i~~~~~--~~-~~~~---- 299 (422)
T PRK05630 238 LIADEIATGFGR-----TGE---LFATLAAGVTPDIMCV--GKALTGGFMSFAATLCTDK-VAQLIS--TP-NGGG---- 299 (422)
T ss_pred EEEecceeCCCc-----Cch---hhHHHhcCCCCCeeee--echhhcCccccceeeccHH-HHHHHh--cc-CCCC----
Confidence 999999876632 121 111222343 77765 4875444 34565666543 222110 00 0000
Q ss_pred CcccCCCCCch---HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEEecCC-CCHHHH
Q 009181 383 PTVAGSRPGGL---IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAFGSDV-VDIFEV 456 (541)
Q Consensus 383 ~~~~gsr~~~~---~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~~~~-~~~~~l 456 (541)
....++.++.. .++..++++.+.++ +..++..++.++|++.|+++.....+.+ ....++.+.+.+ .+...+
T Consensus 300 ~~~h~~T~~g~Pla~aaa~aaL~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~~~~~~ 376 (422)
T PRK05630 300 ALMHGPTFMANPLACAVAHASLEIIETG---MWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPVDMEEA 376 (422)
T ss_pred ccccCCCCcCCHHHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcccHHHH
Confidence 01112222222 23444555555443 3455777777788777765322111211 124555555543 245688
Q ss_pred HHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 457 NDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 457 ~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
.+.+.++|..+...+ +.+|+.++...+ +|+|++++.|++++++
T Consensus 377 ~~~~~~~Gl~~~~~g--~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 377 TQAAVDHGVWLRPFG--RLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHCCeEEEecC--CEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 889999998776544 589998876655 9999999999999854
No 342
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.56 E-value=2.8e-12 Score=135.99 Aligned_cols=295 Identities=19% Similarity=0.156 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhcCC--
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFNI-- 248 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~G~-- 248 (541)
...++.+.++++++.+.+. + .|+++||||+..|++.+|.+. | +++|+.-..+|.. ...+....|.
T Consensus 97 ~~~~lae~L~~~~p~~~~~----v--~f~~SGsEA~e~AlklAr~~t----g--r~~ii~~~~~yHG~t~~a~s~~~~~~ 164 (457)
T PRK05639 97 RAIRVAEKLAEISPIENPK----V--LFGLSGSDAVDMAIKVSKFST----R--RPWILAFIGAYHGQTLGATSVAAFQS 164 (457)
T ss_pred HHHHHHHHHHhhCCCCcCE----E--EEeCchHHHHHHHHHHHHHhc----C--CCeEEEECCCcCCccHHHHHHcCCCc
Confidence 3345667777776543233 5 899999999999999998642 2 2567776655444 3333332221
Q ss_pred -----------eEEEeeCCCCCc--------cC--------HHHHHHhh------ccCceEEEeecCCCCCccccC----
Q 009181 249 -----------KLWRVPVDKEFR--------AD--------VKAIKKYI------NRNTVLIVGSAPGFPHGIIDP---- 291 (541)
Q Consensus 249 -----------~v~~v~~~~~~~--------~d--------~~~Le~~i------~~~t~~vv~~~~~~~~G~id~---- 291 (541)
.+..+|....++ -| .+.+++.+ .+++.+|++.......|.+.|
T Consensus 165 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~y 244 (457)
T PRK05639 165 SQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENF 244 (457)
T ss_pred ccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHH
Confidence 245565542111 02 23455554 246788888888777787655
Q ss_pred HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEeccccccccc
Q 009181 292 IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQF 369 (541)
Q Consensus 292 i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~ 369 (541)
+++|.++|++||+++++|+++.||-. .|. .+.....| .|++++ -|.+.++.+.|+++.+++ +... .
T Consensus 245 l~~l~~lc~~~g~llI~DEv~tG~Gr-----tG~---~~a~~~~gv~PDiv~~--gK~l~gG~pi~av~~~~~-i~~~-~ 312 (457)
T PRK05639 245 FKELKKLLDEHGILLVMDEVQTGIGR-----TGK---WFASEWFEVKPDLIIF--GKGVASGMGLSGVIGRKE-LMDL-T 312 (457)
T ss_pred HHHHHHHHHHcCCEEEEechhhccCc-----Cch---HHHHHhcCCCCCEEEe--chhhcCCCcceeEEehHH-HHhh-c
Confidence 88999999999999999999987632 111 01111122 487775 488666677787777544 3321 1
Q ss_pred ccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecC--CCeeEEEE
Q 009181 370 VAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGR--PDMTIVAF 446 (541)
Q Consensus 370 ~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~f 446 (541)
. +... .+..|... ..++..++++.+..+ +..++..++.++|++.|+++ .+..++++ ....++.+
T Consensus 313 -~------~~~~-~T~~g~p~--~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gv 379 (457)
T PRK05639 313 -S------GSAL-LTPAANPV--ISAAAEATLEIIEEE---NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGV 379 (457)
T ss_pred -C------CCcc-cCCCcCHH--HHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEE
Confidence 0 1000 11111110 123444555555443 45666667888888888763 22233322 12334444
Q ss_pred ecCC----CC---HHHHHHHHHhCCceeccCCC-CCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 447 GSDV----VD---IFEVNDIMSSKGWHLNPLQR-PNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 447 ~~~~----~~---~~~l~~~l~~~G~~~~~~~~-~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
.+.. .+ ...+.+.+.++|..+...+. ++.+|++++...+ +|+|++++.|+++++++.
T Consensus 380 e~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 380 EIVKENGKPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred EEecCCCCCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 3321 11 34677888999988765543 4789999987666 999999999999998764
No 343
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.56 E-value=1.4e-12 Score=137.78 Aligned_cols=295 Identities=16% Similarity=0.068 Sum_probs=171.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCe----
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIK---- 249 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~---- 249 (541)
.++.+.+++..+.+... .+ .++++|++|+..|++.+|.+..+ +.|+.-..+|......+...+..
T Consensus 87 ~~la~~l~~~~~~~~~~---~~--~f~~sGsea~e~Alklar~~~~r------~~iv~~~~~yHG~~~~~~~~~~~~~~~ 155 (425)
T PRK08088 87 LELCEKMNQKVPGDFAK---KT--LLVTTGSEAVENAVKIARAATKR------SGVIAFTGAYHGRTHYTLALTGKVNPY 155 (425)
T ss_pred HHHHHHHHHhCCCCCCC---EE--EEeCCcHHHHHHHHHHHHHHhCC------CeEEEECCccCCccHHHHHhhCCCCcc
Confidence 35777788877654322 24 78999999999999999865321 34555555544433222222111
Q ss_pred ----------EEE--eeCCCCC-cc--CHHHHHHhhc-----cCceEEEeecCCCCCccccC----HHHHHHHHHHcCCE
Q 009181 250 ----------LWR--VPVDKEF-RA--DVKAIKKYIN-----RNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTC 305 (541)
Q Consensus 250 ----------v~~--v~~~~~~-~~--d~~~Le~~i~-----~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~ 305 (541)
+.. +|.+.++ .. ++++|+++++ ++..+|++......-|.+.+ +++|.++|++||++
T Consensus 156 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~ 235 (425)
T PRK08088 156 SAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIM 235 (425)
T ss_pred ccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 112 2222221 11 1556888875 35677777776666676655 89999999999999
Q ss_pred EEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcc
Q 009181 306 LHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTV 385 (541)
Q Consensus 306 lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (541)
+++|++|+++... |. ...++....-+|..++ .|.+.++..+|+++.+.+ +...... ..
T Consensus 236 lI~Dev~~g~g~~-----g~-~~~~~~~~~~pdi~s~--sK~l~~G~rig~v~~~~~-~~~~~~~-------~~------ 293 (425)
T PRK08088 236 LIADEVQTGAGRT-----GT-LFAMEQMGVAADLTTF--AKSIAGGFPLAGVTGRAE-VMDAIAP-------GG------ 293 (425)
T ss_pred EEEeccccCCCcC-----cc-hhHHhhcCCCCCEEEE--eccccCCCcceeeEecHH-HHhhcCC-------CC------
Confidence 9999999875321 11 0011111111354444 588666666898777533 3221110 00
Q ss_pred cCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhc----CCCeEEecCCCeeEEEEecCC-C--------C
Q 009181 386 AGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKE----IPELFIIGRPDMTIVAFGSDV-V--------D 452 (541)
Q Consensus 386 ~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~f~~~~-~--------~ 452 (541)
.++..+.....+.++...+......++.++..+..+++.+.|.+ .|.+.-+..+ +.++++.+.+ . .
T Consensus 294 ~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~~~~~~~~p~~~~ 372 (425)
T PRK08088 294 LGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHSKPNAKL 372 (425)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEecCCCCCCCCHHH
Confidence 01111112334555555554434456666666666666666654 3443323222 5556666521 1 2
Q ss_pred HHHHHHHHHhCCceecc-CCCCCeEEEEecCCC-HHHHHHHHHHHHHHHHHH
Q 009181 453 IFEVNDIMSSKGWHLNP-LQRPNSIHICVTLQH-VAVVDVFLRDLRESVETV 502 (541)
Q Consensus 453 ~~~l~~~l~~~G~~~~~-~~~~~~iRi~~~~~~-~e~id~~i~~L~~~~~~l 502 (541)
..++.+.+.++|+.+.. ...++.+|++++..+ .+++++.++.|+++++..
T Consensus 373 ~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 373 TAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred HHHHHHHHHhCCCEEecCCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 56788899999976543 233578999998655 599999999999998654
No 344
>PRK07481 hypothetical protein; Provisional
Probab=99.55 E-value=3.9e-12 Score=134.89 Aligned_cols=307 Identities=19% Similarity=0.176 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccchHHH-HHhhcC-
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYDK-AAQYFN- 247 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s~~k-a~~~~G- 247 (541)
..+.++.+.++++++-+.-+ .+ .++++||||+..|++.+|.+... +|. .+.+|+.-..+|..... +....+
T Consensus 86 ~~~~~lae~L~~~~~~~~~~---~v--~f~~sGsEAve~AlklAr~~~~~-~g~~~r~~ii~~~~~yHG~t~ga~s~~~~ 159 (449)
T PRK07481 86 PRAIELSYELIDMFAPEGMR---RV--FFSSGGSDSVETALKLARQYWKV-RGQPERTKFISLKQGYHGTHFGGASVNGN 159 (449)
T ss_pred HHHHHHHHHHHHhcCCCCCC---EE--EEcCchHHHHHHHHHHHHHHHHh-cCCCCCcEEEEECCCcCCcchhhhccCCC
Confidence 33455667777877422112 24 89999999999999999976432 221 24567776665544332 222211
Q ss_pred -----------CeEEEeeCCCCC----c-cCHHH--------HHHhhc----cCceEEEeecCCCCCccccC----HHHH
Q 009181 248 -----------IKLWRVPVDKEF----R-ADVKA--------IKKYIN----RNTVLIVGSAPGFPHGIIDP----IQEL 295 (541)
Q Consensus 248 -----------~~v~~v~~~~~~----~-~d~~~--------Le~~i~----~~t~~vv~~~~~~~~G~id~----i~~I 295 (541)
..+..++.+... . -|.+. +|++|. +++.+|++.......|.+.+ +++|
T Consensus 160 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~l 239 (449)
T PRK07481 160 TVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLV 239 (449)
T ss_pred cccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHH
Confidence 123333332111 1 13333 455553 45789999988877787755 8999
Q ss_pred HHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCC-CceEEEEecccccccccccc
Q 009181 296 GELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAV 372 (541)
Q Consensus 296 ~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~ 372 (541)
.++|++||++++.|+++.||-. .|. .+.+...|+ |++++. |.+.+++ .+|+++.+++ +.... ...
T Consensus 240 r~lc~~~g~llI~DEV~tGfGR-----tG~---~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~-i~~~~-~~~ 307 (449)
T PRK07481 240 REVCDRHGILLIADEVVTGFGR-----TGS---WFGSRGWGVKPDIMCLA--KGITSGYVPLGATMVNAR-IADAF-EAN 307 (449)
T ss_pred HHHHHHcCCEEEEeehhhCcCc-----Cch---hhHhhhcCCCCCEEEEe--ecccCCCcCceEEEEcHH-HHHHH-hcc
Confidence 9999999999999999987732 111 111222333 887775 8755543 5777777654 22211 000
Q ss_pred cccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCC-CeEEecC--CCeeEEEEecC
Q 009181 373 TEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIP-ELFIIGR--PDMTIVAFGSD 449 (541)
Q Consensus 373 ~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~~--~~~~~v~f~~~ 449 (541)
.+..+ ....++..++...++-+++..+..-.-.+..++..++.++|.+.|+++. ...++.. ....++.+.+.
T Consensus 308 -~~~~~----~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~ 382 (449)
T PRK07481 308 -ADFGG----AIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLV 382 (449)
T ss_pred -Ccccc----ccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEec
Confidence 00000 1112223222222344444333222223456677777788887777641 1222222 12334444332
Q ss_pred C----C---C-----HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 450 V----V---D-----IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 450 ~----~---~-----~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
. . + ...+...+.++|+.+...+ +.+|++.+...+ +|+|++++.|+++++++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g--~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 383 ADKATREPIDPSKGYANAVADVARENGVLVRPSG--TKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred ccccccCCCCchhHHHHHHHHHHHhCCeEEEecC--CEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 1 0 1 2456778889998775543 358888776544 99999999999999765
No 345
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.55 E-value=1.5e-12 Score=137.63 Aligned_cols=289 Identities=18% Similarity=0.186 Sum_probs=162.6
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhh-c--CC--
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY-F--NI-- 248 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~-~--G~-- 248 (541)
.++.+.+++.+... +. + .+++|||||+..|++.+|.+. | +++|+....+|......+.. . +.
T Consensus 91 ~~lae~l~~~~~~~-~~----v--~~~~sGseA~e~Alk~ar~~~----g--r~~ii~~~~~yhG~~~~~~~~~~~~~~~ 157 (423)
T TIGR00713 91 ILLAKEIISRVPSV-EM----V--RFVNSGTEATMSAVRLARGYT----G--RDKIIKFEGCYHGHHDALLVKAGSGAAT 157 (423)
T ss_pred HHHHHHHHHhCCcc-cE----E--EEeCCHHHHHHHHHHHHHHhh----C--CCEEEEEcCCCCCChhhhhccccCcccc
Confidence 44666777776543 22 5 899999999999999998752 2 26788888776664332221 1 11
Q ss_pred ---------------eEEEeeCCCCCccCHHHHHHhhc---cCceEEEee-cCCCCCccccC----HHHHHHHHHHcCCE
Q 009181 249 ---------------KLWRVPVDKEFRADVKAIKKYIN---RNTVLIVGS-APGFPHGIIDP----IQELGELALSHGTC 305 (541)
Q Consensus 249 ---------------~v~~v~~~~~~~~d~~~Le~~i~---~~t~~vv~~-~~~~~~G~id~----i~~I~~la~~~~i~ 305 (541)
.+..+|. -|+++++++++ +++.+|++. .+++ +|.+.+ +++|.++|++||++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~l 231 (423)
T TIGR00713 158 LGLPTSPGVPEDFAKLTLVLPY-----NDLEALEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSL 231 (423)
T ss_pred cCCCCCCCCCcccccceEEeCC-----CCHHHHHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCE
Confidence 1122221 28999999997 567788876 5555 798866 78999999999999
Q ss_pred EEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcc
Q 009181 306 LHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTV 385 (541)
Q Consensus 306 lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (541)
+++|++|.|+... ..+. .+.++. ..|.++ +.|.+.++...|+++.++ ++..........+.+ .+.
T Consensus 232 lI~DEv~~g~r~g---~~~~-~~~~~~---~pDi~t--~sK~l~~G~pig~v~~~~-~i~~~~~~~~~~~~~-----~T~ 296 (423)
T TIGR00713 232 LIFDEVMTGFRVA---LGGA-QEYFGV---EPDLTT--LGKIIGGGLPVGAFGGRR-EIMERLAPEGPVYQA-----GTL 296 (423)
T ss_pred EEEEccccccccC---cchh-HHHhCC---Ccchhh--hhhhhcCCCceeeeeEHH-HHHHhhCcCCCeeec-----cCC
Confidence 9999999877321 0000 000111 124443 568855445578777654 333221100000000 111
Q ss_pred cCCCCCchHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEE--EecCC---------CC-
Q 009181 386 AGSRPGGLIAGAWAALMSLGQEG-YLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVA--FGSDV---------VD- 452 (541)
Q Consensus 386 ~gsr~~~~~a~~~~al~~lg~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~--f~~~~---------~~- 452 (541)
.+.. ...+++.++++.+..++ +++..+....+.+.+.+.+++. ++..-......++. |..+. .+
T Consensus 297 ~~~~--~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~ 373 (423)
T TIGR00713 297 SGNP--LAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDT 373 (423)
T ss_pred CCCH--HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEecCCCCChhhhhcccH
Confidence 1111 11223444554443332 3333333333444455555554 33321112233333 33211 11
Q ss_pred --HHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 453 --IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 453 --~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
...+.+.|.++|+.+...+. +.+|+++. .+.++++++++.|++++++
T Consensus 374 ~~~~~~~~~l~~~Gv~v~~~~~-~~~~l~~~-~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 374 ELFAKFFHEMLDKGVFLPPSQF-EACFLSAA-HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred HHHHHHHHHHHHCCeEEecCCc-cceeeECC-CCHHHHHHHHHHHHHHHhh
Confidence 23577888899977654432 46888776 3559999999999998865
No 346
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.54 E-value=5.9e-13 Score=133.40 Aligned_cols=301 Identities=16% Similarity=0.133 Sum_probs=195.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHH-HHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCe
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGT-ESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIK 249 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt-~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~ 249 (541)
++-..+..-+-+..|+.... ..++++.+| +++.+++.++| ... ++ +.|+.+...|.+-.|++...|++
T Consensus 56 ~ltn~l~~d~~~~~G~~~~~-----~~~~vP~atgm~l~l~l~~l~-~r~--~a---~~Viw~ridqkSc~kai~~AGl~ 124 (389)
T PF05889_consen 56 KLTNSLVLDALRLAGLRSVK-----SCFVVPMATGMSLTLCLLALR-MRP--KA---KYVIWPRIDQKSCFKAIERAGLE 124 (389)
T ss_dssp HHHHHHHHHHHHHTTHTTHC-----EEEEESS-HHHHHHHHHHHHH-HHC--T-----EEEEEEEETHHHHHHHHHTT-E
T ss_pred HHHHHHHHHHHHHcCCcccc-----ceEEEecccccHHHHHHHHHh-ccc--CC---ceEEEeeccccchHHHHHhcCCe
Confidence 34444444555667887543 226676655 67777777776 221 23 78999999999999999999999
Q ss_pred EEEeeCC---CCCccCHHHHHHhhcc---CceEEEeecCCCCCccccC-HHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 250 LWRVPVD---KEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP-IQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 250 v~~v~~~---~~~~~d~~~Le~~i~~---~t~~vv~~~~~~~~G~id~-i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
++.||.. +.-..|.+++|+.|++ ++.+.++++.+...|...| +++|+++|++||++.++.+|||--.--.+..
T Consensus 125 ~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~ 204 (389)
T PF05889_consen 125 PVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHL 204 (389)
T ss_dssp EEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHH
T ss_pred EEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHH
Confidence 9999863 3446788999998864 5788999999988998855 9999999999999999999998521111110
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHH
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALM 402 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~ 402 (541)
.. -..+.-.+|.+.-++-|-+..|-|.+.+...++..... ....|+|.. +.....-....+.
T Consensus 205 i~-----~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~---vs~~YpGRa----------s~sp~ld~~itLl 266 (389)
T PF05889_consen 205 IQ-----QAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILA---VSKEYPGRA----------SASPSLDLFITLL 266 (389)
T ss_dssp HH-----HHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHH---HHHTSHSHB----------TSHHHHHHHHHHH
T ss_pred HH-----HHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHH---HHHHhhhhh----------hcccchHHHHHHH
Confidence 00 00111234666666668888888887666655543322 122333332 2333456778888
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhcC---CCeEEecCCC-eeEEEEecCCC------CHHHHHHHHHhCCceecc---
Q 009181 403 SLGQEGYLENTKAIMEVSESIQKGIKEI---PELFIIGRPD-MTIVAFGSDVV------DIFEVNDIMSSKGWHLNP--- 469 (541)
Q Consensus 403 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~-~~~v~f~~~~~------~~~~l~~~l~~~G~~~~~--- 469 (541)
.+|..||.......++.-.++.++|++. -+-++...|. ...++|..+.. +...+...|.++|+....
T Consensus 267 ~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~ 346 (389)
T PF05889_consen 267 SLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVT 346 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEE
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeec
Confidence 8999999999999999999999998763 2444444443 34455555432 367899999999853211
Q ss_pred -C---------CCC-CeEEEEec-CCCHHHHHHHHHHHHHHHH
Q 009181 470 -L---------QRP-NSIHICVT-LQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 470 -~---------~~~-~~iRi~~~-~~~~e~id~~i~~L~~~~~ 500 (541)
. .+| .++-++.+ ..+.||+|.++++|+++++
T Consensus 347 ~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 347 PGGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp TSSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred cCCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 0 111 56777444 3445999999999999875
No 347
>PRK07483 hypothetical protein; Provisional
Probab=99.54 E-value=3.5e-12 Score=134.95 Aligned_cols=306 Identities=17% Similarity=0.119 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC-CCCCeEEecCCccch-HHHHHhhcC--
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG-ITRPEMIIPVSAHSA-YDKAAQYFN-- 247 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G-i~~~~vi~~~~~h~s-~~ka~~~~G-- 247 (541)
...++.+.+++++..+.+. + .++++||||+..|++.+|.+... +| ..+.+|+.-..+|.. ..-+....|
T Consensus 74 ~~~~lae~L~~~~p~~~~~----v--~f~~sGsEAve~AlklAr~~~~~-~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~ 146 (443)
T PRK07483 74 PAEALADRLVAAAPAGLEH----V--YFVSGGSEAVEAALKLARQYFVE-IGQPQRRHFIARRQSYHGNTLGALAIGGNA 146 (443)
T ss_pred HHHHHHHHHHHhCCCCCCE----E--EEcCCcHHHHHHHHHHHHHHHHh-cCCCCCcEEEEECCCcCCcCHHHhhhcCCc
Confidence 3445667777776422222 5 89999999999999999986433 22 224677775555443 333332221
Q ss_pred ----------CeEEEeeCCCCCcc-------------CHHHHHHhhc----cCceEEEeecCCC-CCccccC----HHHH
Q 009181 248 ----------IKLWRVPVDKEFRA-------------DVKAIKKYIN----RNTVLIVGSAPGF-PHGIIDP----IQEL 295 (541)
Q Consensus 248 ----------~~v~~v~~~~~~~~-------------d~~~Le~~i~----~~t~~vv~~~~~~-~~G~id~----i~~I 295 (541)
..+..+|....++- .++++++++. +++.+|++..... .-|.+.+ +++|
T Consensus 147 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~l 226 (443)
T PRK07483 147 WRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRI 226 (443)
T ss_pred ccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHH
Confidence 12233433211111 1356777664 4567888887654 2466654 8999
Q ss_pred HHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCC-CceEEEEecccccccccccc
Q 009181 296 GELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAV 372 (541)
Q Consensus 296 ~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~ 372 (541)
.++|++||+++++|+++.||-. .|. .+.+...| .|++++. |.+.++. ..|+++.+++ +.... .
T Consensus 227 r~lc~~~gillI~DEV~tGfGR-----tG~---~~a~~~~gv~PDiv~~g--K~l~gG~~Pi~av~~~~~-i~~~~-~-- 292 (443)
T PRK07483 227 REVCDRYGVLLILDEVMCGMGR-----TGT---LFACEEDGVAPDLVTIA--KGLGAGYQPIGAVLASDR-IYDAI-A-- 292 (443)
T ss_pred HHHHHHhCCEEEEecceeCccc-----CcH---HHHHhhcCCCCCeeeeh--hhhccCccccEEEEEcHH-HHHHH-h--
Confidence 9999999999999999987733 111 11112223 3777774 7765554 5787777654 22110 0
Q ss_pred cccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecC--CCeeEEEEecC
Q 009181 373 TEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGR--PDMTIVAFGSD 449 (541)
Q Consensus 373 ~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~f~~~ 449 (541)
.+. .....++.+++..+++.+++..+..-.-.+..++..++.++|++.|+++ ....++.+ ....++.+.+.
T Consensus 293 ----~~~--~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~ 366 (443)
T PRK07483 293 ----DGS--GFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELV 366 (443)
T ss_pred ----cCC--CccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEe
Confidence 000 0111223333223344444444432222356777777788888887652 22222221 12333333321
Q ss_pred CC------------CHHHHHHHHHhCCceeccCC------CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 450 VV------------DIFEVNDIMSSKGWHLNPLQ------RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 450 ~~------------~~~~l~~~l~~~G~~~~~~~------~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
.. ....+.+.+.++|..+...+ .++.+|++++...+ +++|++++.|+++++++..
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 367 ADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred ecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 10 12467788899998775432 13689998886655 9999999999999987653
No 348
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.54 E-value=2.9e-12 Score=134.76 Aligned_cols=302 Identities=14% Similarity=0.138 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhcCC--
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFNI-- 248 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~G~-- 248 (541)
...++.+.++++++.+.+. + .++++||||+..|++.+|.+... +|..+.+|+.-..+|.. ...+....+-
T Consensus 87 ~~~~la~~L~~~~p~~~~~----v--~f~~SGsEAve~AlklAr~~~~~-~g~~r~kii~~~~~yHG~t~~a~s~~~~~~ 159 (428)
T PRK07986 87 PAIELCRKLVAMTPQPLEC----V--FLADSGSVAVEVAMKMALQYWQA-KGEPRQRFLTLRHGYHGDTFGAMSVCDPDN 159 (428)
T ss_pred HHHHHHHHHHhhCCCCcCE----E--EEeCCcHHHHHHHHHHHHHHHHh-cCCCCcEEEEECCCcCCCcHhhhcccCCch
Confidence 3455667777776533232 4 89999999999999999975432 23224677776665443 2222222221
Q ss_pred -----------eEEEeeCCCC-----C-ccCHHHHHHhhc---cCceEEEeecC-CCCCcccc----CHHHHHHHHHHcC
Q 009181 249 -----------KLWRVPVDKE-----F-RADVKAIKKYIN---RNTVLIVGSAP-GFPHGIID----PIQELGELALSHG 303 (541)
Q Consensus 249 -----------~v~~v~~~~~-----~-~~d~~~Le~~i~---~~t~~vv~~~~-~~~~G~id----~i~~I~~la~~~~ 303 (541)
.+..+|.... + .-|.+++++.++ ++..+|++... ....|.+. .+++|.++|++||
T Consensus 160 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g 239 (428)
T PRK07986 160 SMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREG 239 (428)
T ss_pred hhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 1233333211 1 125678888885 35667777764 44455532 2899999999999
Q ss_pred CEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCC-CCceEEEEecccccccccccccccCCCcc
Q 009181 304 TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLY 380 (541)
Q Consensus 304 i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p-~g~g~ll~~~~~~~~~~~~~~~~~~~~~~ 380 (541)
+++++|+++.|+-. .|. .+.+...|+ |++++ -|.+.++ ..+|+++.+++ +...... ..+ +...
T Consensus 240 ~lLI~DEv~tG~Gr-----tG~---~fa~~~~gv~PDi~t~--gK~l~gG~~p~~av~~~~~-i~~~~~~--~~~-~~~~ 305 (428)
T PRK07986 240 ILLIADEIATGFGR-----TGK---LFACEHAGIAPDILCL--GKALTGGTMTLSATLTTRE-VAETISN--GEA-GCFM 305 (428)
T ss_pred CEEEEeccccCCcc-----CCC---eeeecccCCCCCEEEe--chhhhCCcccCcchhchHH-HHHHhhc--CCC-Cccc
Confidence 99999999876522 222 122223343 77764 4775444 24565565543 3221110 000 0000
Q ss_pred CCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEEecCC-CCHHHHH
Q 009181 381 VSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAFGSDV-VDIFEVN 457 (541)
Q Consensus 381 ~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~~~~-~~~~~l~ 457 (541)
...+..|. -...++..++++.+.++ +..++..++.++|++.|+++.....+++ ....++.+.+.. .....+.
T Consensus 306 ~~~T~~g~--p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~~~~~~~ 380 (428)
T PRK07986 306 HGPTFMGN--PLACAVANASLSLLESG---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPVNMAALQ 380 (428)
T ss_pred cCCCCCcC--HHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcccHHHHH
Confidence 01111111 11133455555555433 4577777788888888876522222222 123344444433 2456888
Q ss_pred HHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 458 DIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 458 ~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
+.+.++|..+...+ +.+|++++...+ ++++++++.|.+++++
T Consensus 381 ~~l~~~Gl~~~~~g--~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 381 RFFVEQGVWIRPFG--KLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHCCcEEEecC--CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 99999998776544 589998887655 9999999999999853
No 349
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.54 E-value=4.2e-12 Score=134.78 Aligned_cols=298 Identities=17% Similarity=0.105 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCc-cchHHHHHhhcCC-
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSA-HSAYDKAAQYFNI- 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~-h~s~~ka~~~~G~- 248 (541)
+...++.+.++++++.+.+. + .|+++|+||+..|++.+|.+. | +++|+.-..+ |.....+....|.
T Consensus 113 ~~~~~lae~L~~~~p~~~~~----v--~f~~sGseAve~AlklAr~~t----g--r~~ii~~~~~yHG~t~~a~s~~~~~ 180 (459)
T PRK06082 113 ETAIECAEKLTEIAGGELNR----V--LFAPGGTSAIGMALKLARHIT----G--NFKVVSLWDSFHGASLDAISVGGEA 180 (459)
T ss_pred HHHHHHHHHHHHhCCCCCCE----E--EECCCcHHHHHHHHHHHHHhc----C--CCEEEEEeCCCcCccHHHHhhcCCc
Confidence 44556777888887543232 4 899999999999999998652 2 2556655444 4444334333321
Q ss_pred -----------eEEEeeCCCCCc-----c------CHHHHHHhhc--cCceEEEeecCCCCCccccC---HHHHHHHHHH
Q 009181 249 -----------KLWRVPVDKEFR-----A------DVKAIKKYIN--RNTVLIVGSAPGFPHGIIDP---IQELGELALS 301 (541)
Q Consensus 249 -----------~v~~v~~~~~~~-----~------d~~~Le~~i~--~~t~~vv~~~~~~~~G~id~---i~~I~~la~~ 301 (541)
.+..+|....++ . +++.+++.++ +++.+|++.......+.+.| +++|.++|++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~ 260 (459)
T PRK06082 181 CFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDK 260 (459)
T ss_pred ccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHH
Confidence 233444321111 1 1356787775 35778888877654333444 8999999999
Q ss_pred cCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCC-CceEEEEecccccccccccccccCCC
Q 009181 302 HGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVTEWSGG 378 (541)
Q Consensus 302 ~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~~~~~~ 378 (541)
||+.+++|+++.||-. .|. .+.+...| .|++++ -|.+.++. .+|+++.+++ +... . ..+
T Consensus 261 ~g~llI~DEV~tG~GR-----tG~---~fa~e~~gv~PDiv~~--gKgl~gG~~P~~av~~~~~-i~~~-~------~~~ 322 (459)
T PRK06082 261 HNVLLIIDEIPNGMGR-----TGE---WFTHQAYGIEPDILCI--GKGLGGGLVPIAAMITKDK-YNTA-A------QIS 322 (459)
T ss_pred cCCEEEEechhhCCCc-----cch---hhHhHhhCCCCCEEEe--cccccCCCCcceEEEEcHH-HHhh-c------cCC
Confidence 9999999999987632 221 11222233 377775 48765553 5777777654 2211 0 000
Q ss_pred ccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecC--CCeeEEEEecCC--C--
Q 009181 379 LYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGR--PDMTIVAFGSDV--V-- 451 (541)
Q Consensus 379 ~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~f~~~~--~-- 451 (541)
. ...+..|... ..++..++++.+..+ +..++..++.++|.+.|+++ ....+++. ..+.++.+.+.. .
T Consensus 323 ~-~~~T~~gnpl--~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~ 396 (459)
T PRK06082 323 L-GHYTHEKSPL--GCAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTK 396 (459)
T ss_pred C-CCCCCCcCHH--HHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCcccc
Confidence 0 0012222111 123444455544333 46777788888888888764 11222222 123444444321 1
Q ss_pred --C---HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHcC
Q 009181 452 --D---IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQN 505 (541)
Q Consensus 452 --~---~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~~ 505 (541)
+ ...+...+.++|..+...+ .+.+|++++...+ +|+|++++.+++++.++.++
T Consensus 397 ~~~~~~~~~~~~~~~~~Gvl~~~~~-~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~~ 455 (459)
T PRK06082 397 ERAYDEAEAVLYRCLNNGLSFKVSQ-GNVIQLSPPLIITREELTQALAILEEAIAKICQD 455 (459)
T ss_pred CccHHHHHHHHHHHHhCCCEEEecC-CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhhh
Confidence 1 3456677889998765432 4689999876544 99999999999999887543
No 350
>PRK06917 hypothetical protein; Provisional
Probab=99.54 E-value=1e-11 Score=131.62 Aligned_cols=310 Identities=15% Similarity=0.125 Sum_probs=177.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCC-CCeEEecCCccchH-HHHHhhcCC
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGIT-RPEMIIPVSAHSAY-DKAAQYFNI 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~-~~~vi~~~~~h~s~-~ka~~~~G~ 248 (541)
+...++.+.+++++...... + .|+++||||+..|++.+|.+... +|.+ +++|+.-+.+|..+ .-+....+.
T Consensus 74 ~~~~~lae~L~~~~p~~~~~----v--~f~~sGsEAve~AlklAr~~~~~-rg~t~r~~ii~~~~~yHG~t~~als~~~~ 146 (447)
T PRK06917 74 EPAEKLAKKLSDLSPGDLNW----S--FFVNSGSEANETAMKIAIQHFQE-RGIQGKHKILSRWMSYHGITMGALSMSGH 146 (447)
T ss_pred HHHHHHHHHHHHhCCCCCCE----E--EEeCChHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCcCCccHHHHHhcCC
Confidence 44556777888887543232 4 89999999999999999876433 2322 46777766555443 333332221
Q ss_pred ------------eEEEeeCCCCCc------------cCHHHHHHhhc----cCceEEEeecCCCCC-ccccC----HHHH
Q 009181 249 ------------KLWRVPVDKEFR------------ADVKAIKKYIN----RNTVLIVGSAPGFPH-GIIDP----IQEL 295 (541)
Q Consensus 249 ------------~v~~v~~~~~~~------------~d~~~Le~~i~----~~t~~vv~~~~~~~~-G~id~----i~~I 295 (541)
.+..+|.....+ -+.+.++++++ +++.+|++....... |.+.| +++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~l 226 (447)
T PRK06917 147 PLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVI 226 (447)
T ss_pred ccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHH
Confidence 122233211111 13467777775 357888888765433 45543 8899
Q ss_pred HHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCC-CceEEEEecccccccccccc
Q 009181 296 GELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAV 372 (541)
Q Consensus 296 ~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~ 372 (541)
.++|++||+++++|+++.||-. .|. .+.+...| .|.++++ |.+.+++ ..|+++.+++ +..... ..
T Consensus 227 r~lc~~~g~llI~DEv~tGfGR-----tG~---~~a~~~~gv~PDi~~~g--K~l~~G~~Pi~a~~~~~~-i~~~~~-~~ 294 (447)
T PRK06917 227 KEICDHYDILFIADEVMTGLGR-----TGA---MFAMEHWGVEPDIMTLG--KGLGAGYTPIAATVVSDR-VMEPIL-RG 294 (447)
T ss_pred HHHHHHcCCEEEEechhhCcCc-----ccc---hhhHHhcCCCCCEEEee--ehhccCCcceEEEEEcHH-HHHHHh-cc
Confidence 9999999999999999887632 121 11112223 3777664 8765554 5777777653 322110 00
Q ss_pred cccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCC-CeEEecC--CCeeEEEEecC
Q 009181 373 TEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIP-ELFIIGR--PDMTIVAFGSD 449 (541)
Q Consensus 373 ~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~~--~~~~~v~f~~~ 449 (541)
. +......+..|... ..++..++++.+..+ +..++..++.++|.+.|+++. ...++.. ....++.+.+.
T Consensus 295 ~---~~~~~~~T~~gnpl--~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~ 366 (447)
T PRK06917 295 S---RSIMSGHTLSANPL--SAATALAVLEYMEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFV 366 (447)
T ss_pred C---cccccccCCCCCHH--HHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEe
Confidence 0 00000011111111 133455555555433 456677777778877776641 1222222 12333433331
Q ss_pred --C-----C-----CHHHHHHHHHhCCceeccCC------CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHcCCC
Q 009181 450 --V-----V-----DIFEVNDIMSSKGWHLNPLQ------RPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQNPG 507 (541)
Q Consensus 450 --~-----~-----~~~~l~~~l~~~G~~~~~~~------~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~~~~ 507 (541)
. . -...+...+.++|+.+...+ ..+.+|++++...+ +|+|++++.+.++++++.++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~~~~ 443 (447)
T PRK06917 367 ADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQKGG 443 (447)
T ss_pred ccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1 0 13467778889998764331 24689998886666 9999999999999998866443
No 351
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.54 E-value=5.2e-12 Score=134.20 Aligned_cols=294 Identities=15% Similarity=0.165 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEc-CcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhcC---
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMT-SGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFN--- 247 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t-~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~G--- 247 (541)
+.++.+.+.+++..+... .+.+ .++ ++||||+..|++.+|.+. | +++|+.-..+|.. ...+....|
T Consensus 108 ~~~la~~L~~~~p~~~~~-~~~v--~f~~~SGSEAve~AlklAr~~t----g--r~~ii~~~~~yHG~t~~als~t~~~~ 178 (464)
T PRK06938 108 KDQFVQDLFASLPEAFAR-EAKI--QFCGPTGTDAVEAALKLVKTAT----G--RSTVLSFQGGYHGMSQGALSLMGNLG 178 (464)
T ss_pred HHHHHHHHHHhCcccccc-cceE--EEeCCCcHHHHHHHHHHHHHhh----C--CCeEEEECCccCCccHHHHhhcCCcc
Confidence 334555666665322110 0012 454 799999999999998652 2 3567766655444 333333221
Q ss_pred ---------CeEEEeeCCCCCc------------cCHHHHHHhhcc------CceEEEeecCCCCCccccC----HHHHH
Q 009181 248 ---------IKLWRVPVDKEFR------------ADVKAIKKYINR------NTVLIVGSAPGFPHGIIDP----IQELG 296 (541)
Q Consensus 248 ---------~~v~~v~~~~~~~------------~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~----i~~I~ 296 (541)
-.+..+|...+++ .+.+.+++.+.+ ++.+|++......-|.+.| ++++.
T Consensus 179 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr 258 (464)
T PRK06938 179 PKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLR 258 (464)
T ss_pred ccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHH
Confidence 1345555532221 236778888863 4788888887766677654 88999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEecccccccccccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTE 374 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~ 374 (541)
++|++||+.+++|+++.||-. .|. .+.+...|| |++++. |.+.++...|+++.+++ + . .+
T Consensus 259 ~lc~~~giLlI~DEV~tGfGR-----tG~---~~a~e~~gv~PDiv~~g--KglggG~PlsAv~~~~~-~-~-~~----- 320 (464)
T PRK06938 259 RITEEAGIPLIVDEIQSGFGR-----TGK---MFAFEHAGIIPDVVVLS--KAIGGSLPLAVVVYREW-L-D-TW----- 320 (464)
T ss_pred HHHHHcCCEEEEeccccCCCc-----CcH---HHHHHhcCCCCCEEEee--ccccCCCceEEEeehhH-h-h-cc-----
Confidence 999999999999999987732 111 111222333 888875 77666677888887654 2 1 11
Q ss_pred cCCCccCCCcccCCCCCchH---HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecC--CCeeEEEEec
Q 009181 375 WSGGLYVSPTVAGSRPGGLI---AGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGR--PDMTIVAFGS 448 (541)
Q Consensus 375 ~~~~~~~~~~~~gsr~~~~~---a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~f~~ 448 (541)
..+ ..++.+++.. ++..++++.+.++ +..++..++.++|.+.|+++ ....++++ ....++.+.+
T Consensus 321 -~~~------~~~~T~~gnpla~Aaa~a~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~ 390 (464)
T PRK06938 321 -QPG------AHAGTFRGNQMAMAAGSATLRYIKEH---RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEI 390 (464)
T ss_pred -CCC------CCCCCCCcCHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEe
Confidence 001 1122222222 3444444444433 45666777777777777654 11222222 1233444433
Q ss_pred CCC------------C---HHHHHHHHHhCCceeccCC-CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 449 DVV------------D---IFEVNDIMSSKGWHLNPLQ-RPNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 449 ~~~------------~---~~~l~~~l~~~G~~~~~~~-~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
.+. + ...+...+.++|..+...+ ..+.+|+.++...+ +|++++++.+++++.++.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 391 VDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred ccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHHh
Confidence 210 1 2456778889998765433 34689998776655 999999999999997754
No 352
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.54 E-value=3.6e-12 Score=135.51 Aligned_cols=304 Identities=15% Similarity=0.146 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCC-CCeEEecCCccch-HHHHHhhcCC
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGIT-RPEMIIPVSAHSA-YDKAAQYFNI 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~-~~~vi~~~~~h~s-~~ka~~~~G~ 248 (541)
+.+.++.+.+++++..+.+. + .++++||||+..|++.+|.+... +|.+ +++|+.-..+|.. ...+....|-
T Consensus 99 ~~~~~lae~L~~~~p~~~~~----v--~f~~SGseAve~AlklAr~~~~~-~g~tgr~~ii~~~~~YHG~t~~als~s~~ 171 (460)
T PRK06916 99 VPSILLAEKLIEVVPEGLKK----V--FYSDSGATAVEIAIKMAFQYWQN-KGKPKKQRFVTLKNAYHGDTIGAVSVGAI 171 (460)
T ss_pred HHHHHHHHHHHHhCCCCCCE----E--EEeCCcHHHHHHHHHHHHHHHHh-cCCCCCcEEEEECCcCCcccHHhHhccCC
Confidence 34456777888887533222 5 89999999999999999975432 2322 4677766665444 3333333221
Q ss_pred ------------eEEEeeCCCCC------------ccCHHHHHHhhc---cCceEEEeec-CCCCCccccC----HHHHH
Q 009181 249 ------------KLWRVPVDKEF------------RADVKAIKKYIN---RNTVLIVGSA-PGFPHGIIDP----IQELG 296 (541)
Q Consensus 249 ------------~v~~v~~~~~~------------~~d~~~Le~~i~---~~t~~vv~~~-~~~~~G~id~----i~~I~ 296 (541)
.+..+|....+ .-+++.+++.++ ++..+|++.. .....|.+.+ +++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr 251 (460)
T PRK06916 172 DLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLR 251 (460)
T ss_pred cccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHH
Confidence 23444432111 124567778775 4678888887 4666677643 88999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCC-CceEEEEeccccccccccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVT 373 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~ 373 (541)
++|++||+++++|+++.||-. .|. .+.+...| .|++++. |.+.++. .+|+++.+++ +..... .
T Consensus 252 ~lc~~~g~llI~DEV~TG~GR-----tG~---~~a~~~~gv~PDiv~~g--K~l~gG~~Pi~av~~~~e-i~~~~~---~ 317 (460)
T PRK06916 252 NLCTKYNVLFITDEVATGFGR-----TGK---MFACEHENVTPDIMTAG--KGLTGGYLPIAITVTTDE-IYNAFY---G 317 (460)
T ss_pred HHHHHcCCEEEeechhhCCCc-----Cch---hhHHHhcCCCCCeeeee--hhhhcCccccceeeecHH-HHHHhh---c
Confidence 999999999999999877632 121 11222233 3777764 7655553 5777777654 322111 0
Q ss_pred ccCCCccCCCcccCCCCCchH---HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEEec
Q 009181 374 EWSGGLYVSPTVAGSRPGGLI---AGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAFGS 448 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~~---a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~~ 448 (541)
.+... .....++..+... ++..++++.+..+ +..++..++.+++++.|+++.....+++ ....++.+.+
T Consensus 318 ~~~~~---~~~~~~~T~~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel 391 (460)
T PRK06916 318 DYEEQ---KTFFHGHSYTGNPLGCAVALANLELYEKT---NLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIEL 391 (460)
T ss_pred ccccc---CccccCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEe
Confidence 00000 0011122222122 2344444444333 4667788888888888876522222221 1123333333
Q ss_pred CC--C-------C---HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 449 DV--V-------D---IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 449 ~~--~-------~---~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
.+ . + ..++...+.++|+.+...+ +.+|+.++...+ +|+|++++.|+++++++-
T Consensus 392 ~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g--~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 392 VKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLG--NTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred ecccccccCCCchhhHHHHHHHHHHHCCeEEEecC--CEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 11 1 1 2467788899998776543 579998776555 999999999999997653
No 353
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.53 E-value=7.9e-12 Score=131.84 Aligned_cols=289 Identities=18% Similarity=0.141 Sum_probs=167.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhcC----
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFN---- 247 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~G---- 247 (541)
+.++.+.+++++.....+ .+ .++++||||+..|++.+|.+. | +++|+.-..+|.. ...+....+
T Consensus 78 ~~~la~~l~~~~p~~~~~---~v--~f~~sGseA~e~AlklAr~~t----g--r~~ii~~~~~yHG~t~~~~~~~~~~~~ 146 (420)
T TIGR00700 78 YVALAEKLNRIAPGSGPK---KS--VFFNSGAEAVENAVKIARSYT----G--RPGVVAFDHGFHGRTNMTMALTAKVMP 146 (420)
T ss_pred HHHHHHHHHHhCCCCCCC---EE--EEeCCcHHHHHHHHHHHHHhc----C--CCcEEEECCCcCCCcHHHHHhcCCCcc
Confidence 345666777776422111 24 899999999999999998752 2 2567665555443 333333211
Q ss_pred ----C-----eEEEeeCCCCCc-----------cCHHHHHHhhc-----cCceEEEeecCCCCCccccC----HHHHHHH
Q 009181 248 ----I-----KLWRVPVDKEFR-----------ADVKAIKKYIN-----RNTVLIVGSAPGFPHGIIDP----IQELGEL 298 (541)
Q Consensus 248 ----~-----~v~~v~~~~~~~-----------~d~~~Le~~i~-----~~t~~vv~~~~~~~~G~id~----i~~I~~l 298 (541)
. .+..+|....++ -+++.+++.+. +++.+|++......+|.+.+ +++|.++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~l 226 (420)
T TIGR00700 147 YKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDW 226 (420)
T ss_pred cccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHH
Confidence 1 233344321111 12566777663 45788999888887888766 8999999
Q ss_pred HHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccC
Q 009181 299 ALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWS 376 (541)
Q Consensus 299 a~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~ 376 (541)
|++||+++++|++|.|+... |. .+.+...| .|.+++ .|.+.++..+|+++.+++ +.+....
T Consensus 227 c~~~gillI~DEV~tg~gr~-----g~---~~a~~~~~~~pDi~~l--sK~l~~G~pig~v~~~~~-i~~~~~~------ 289 (420)
T TIGR00700 227 CREHGIVFIADEVQTGFART-----GA---MFACEHEGPEPDLITT--AKSLADGLPLSGVTGRAE-IMDAPAP------ 289 (420)
T ss_pred HHHcCCEEEEEecccCCccc-----ch---hHHHhhcCCCCCEEEe--eccccCCcceEEEEecHH-HHhhcCC------
Confidence 99999999999999887431 10 01111122 366664 588666667898777543 3221100
Q ss_pred CCccCCCcccCCCCCchHHHHHHH---HHHHhHHHHHHHHHHHHHHHHHHHHHhhc----CCCeEEecCCCeeEEEEecC
Q 009181 377 GGLYVSPTVAGSRPGGLIAGAWAA---LMSLGQEGYLENTKAIMEVSESIQKGIKE----IPELFIIGRPDMTIVAFGSD 449 (541)
Q Consensus 377 ~~~~~~~~~~gsr~~~~~a~~~~a---l~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~f~~~ 449 (541)
. ..++..+....++.++ ++.+..+++ .++..++.+++++.|++ .|.+.-+. +...++++.+.
T Consensus 290 -~------~~~~T~~~~pl~~aaa~a~l~~l~~~~~---~~~~~~~g~~l~~~L~~l~~~~~~~~~vr-g~G~~~~i~~~ 358 (420)
T TIGR00700 290 -G------GLGGTYAGNPLACAAALAVLAIIESEGL---IERARQIGRLVTDRLTTLKAVDPRIGDVR-GLGAMIAVELV 358 (420)
T ss_pred -C------CcCCCCCcCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHhhCCCEEEee-ccceEEEEEEe
Confidence 0 0111112223345444 554444443 34444444455555543 44443332 33555555442
Q ss_pred CC--------CHHHHHHHHHhCCceeccC-CCCCeEEEEecC-CCHHHHHHHHHHHHHHHH
Q 009181 450 VV--------DIFEVNDIMSSKGWHLNPL-QRPNSIHICVTL-QHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 450 ~~--------~~~~l~~~l~~~G~~~~~~-~~~~~iRi~~~~-~~~e~id~~i~~L~~~~~ 500 (541)
+. ...++.+.+.++|+.+... .+++.+|++++. .+.+++++++++|+++++
T Consensus 359 ~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 359 DPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred cCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 11 1345667778899876542 234789999875 345999999999998863
No 354
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=1.9e-11 Score=128.88 Aligned_cols=290 Identities=19% Similarity=0.143 Sum_probs=170.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhcCC----
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFNI---- 248 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~G~---- 248 (541)
.++.+.+++++..+..+ .+ .|+++||||+..|++.+|.+. | +++|+.-..+|.. ..-+....|.
T Consensus 86 ~~la~~l~~~~p~~~~~---~~--~f~~sGseA~e~AlklAr~~t----g--r~~ii~~~~~yHG~t~~~~s~t~~~~~~ 154 (421)
T PRK06777 86 VTLAERINALAPIDGPA---KT--AFFTTGAEAVENAVKIARAYT----G--RPGVIAFGGAFHGRTLLTMALTGKVAPY 154 (421)
T ss_pred HHHHHHHHHhCCCCCCc---eE--EEeCCcHHHHHHHHHHHHHhh----C--CCeEEEEcCCcCCccHHHHhhcCCCccc
Confidence 45666777776532111 24 889999999999999998752 2 2567766655444 3333332221
Q ss_pred ---------eEEEeeCCCCC-----ccCHHHHHHhhc-----cCceEEEeecCCCCCccc-cC---HHHHHHHHHHcCCE
Q 009181 249 ---------KLWRVPVDKEF-----RADVKAIKKYIN-----RNTVLIVGSAPGFPHGII-DP---IQELGELALSHGTC 305 (541)
Q Consensus 249 ---------~v~~v~~~~~~-----~~d~~~Le~~i~-----~~t~~vv~~~~~~~~G~i-d~---i~~I~~la~~~~i~ 305 (541)
.+..+|..+.. .-+++.+++.++ +++.+|++.......|.. .| +++|.++|++||++
T Consensus 155 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~l 234 (421)
T PRK06777 155 KVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGIL 234 (421)
T ss_pred ccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 12333332211 124667888775 346788888887777754 34 89999999999999
Q ss_pred EEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCC
Q 009181 306 LHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSP 383 (541)
Q Consensus 306 lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (541)
+++|+++.|+.. .|. .+.+...+ .|++++ .|.+.++..+|+++.++ ++.+.... + .
T Consensus 235 lI~DEv~tg~gr-----~g~---~~~~~~~~~~pDiv~~--sK~l~~G~pigav~~~~-~i~~~~~~----~--~----- 292 (421)
T PRK06777 235 LIADEVQTGFAR-----TGK---LFAMEYYDVKPDLITM--AKSLGGGMPISAVVGRA-EVMDAPAP----G--G----- 292 (421)
T ss_pred EEEechhhCCcc-----CCc---hhhhhhcCCCCCEEee--ehhhcCCCceEEEEEcH-HHHhccCC----C--C-----
Confidence 999999987633 111 11111122 366654 58865556688877754 33322110 0 0
Q ss_pred cccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC----CCeEEecCCCeeEEEEecCCC----C---
Q 009181 384 TVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI----PELFIIGRPDMTIVAFGSDVV----D--- 452 (541)
Q Consensus 384 ~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~f~~~~~----~--- 452 (541)
.++..+....++.+++..+..-.-.+..++..++.+++++.|+++ |.+.-+ .+...++.+.+... +
T Consensus 293 --~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~~~~~~~~~~~ 369 (421)
T PRK06777 293 --LGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDI-RARGSMVAVEFNDPQTGKPSPE 369 (421)
T ss_pred --CCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCceEEEEEEEecCccCCccHH
Confidence 011111123344444444422112467778888888888888764 333323 34445555433211 1
Q ss_pred -HHHHHHHHHhCCceeccCC-CCCeEEEEecCC-CHHHHHHHHHHHHHHH
Q 009181 453 -IFEVNDIMSSKGWHLNPLQ-RPNSIHICVTLQ-HVAVVDVFLRDLRESV 499 (541)
Q Consensus 453 -~~~l~~~l~~~G~~~~~~~-~~~~iRi~~~~~-~~e~id~~i~~L~~~~ 499 (541)
...+...+.++|+.+...+ .++.+|++++.. +.+++++++++|++++
T Consensus 370 ~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 370 FTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred HHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 2345566788997765432 346899998754 4499999999999876
No 355
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.52 E-value=7.4e-12 Score=128.77 Aligned_cols=271 Identities=19% Similarity=0.192 Sum_probs=167.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH-HHHhhcC-----
Q 009181 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD-KAAQYFN----- 247 (541)
Q Consensus 174 ~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~-ka~~~~G----- 247 (541)
.++.+.++++++.+ . + .++++||+|+..|++++|.+. | +++|+..+.+|.... -+....+
T Consensus 69 ~~la~~l~~~~~~~--~----v--~~~~SGseA~e~Alklar~~~----g--r~~Ii~~~~syHG~t~~~ls~~~~~~~~ 134 (364)
T PRK04013 69 EEMLEELSKWVNYE--Y----V--YMGNSGTEAVEAALKFARLYT----G--RKEIIAMTNAFHGRTMGALSATWKPKYR 134 (364)
T ss_pred HHHHHHHHhhcCCC--E----E--EEeCchHHHHHHHHHHHHHHh----C--CCEEEEECCccccCchhhccCCCCcccc
Confidence 34555677776553 2 4 899999999999999998752 2 367877776655433 2222211
Q ss_pred --C-----eEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCcccc-C---HHHHHHHHHHcCCEEEEeCCcccch
Q 009181 248 --I-----KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIID-P---IQELGELALSHGTCLHVDLCLGGFV 316 (541)
Q Consensus 248 --~-----~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id-~---i~~I~~la~~~~i~lhvD~a~gg~~ 316 (541)
. .+..+|.+ |.+++++.+.+++.+|++.......|.+. | +++|.++|++||++++.|+++.|+
T Consensus 135 ~~~~p~~~~~~~~~~~-----d~~~l~~~i~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~- 208 (364)
T PRK04013 135 EDFEPLVPGFKHIPFN-----DVEAAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL- 208 (364)
T ss_pred cCCCCCCCCcEEecCC-----CHHHHHHHhcCCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-
Confidence 1 23333332 78899999998999999998877666654 4 999999999999999999998876
Q ss_pred hhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchH
Q 009181 317 LPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLI 394 (541)
Q Consensus 317 ~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~ 394 (541)
. .|. .+.+...|+ |.+++. |.+.++...|+++.+.+ +. . + ..++.+++..
T Consensus 209 R-----tG~---~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~~~~~-~~-------~----~------~~~~T~~gnp 260 (364)
T PRK04013 209 R-----TGK---FLAIEHYKVEPDIVTMG--KGIGNGVPVSLTLTNFD-VE-------R----G------KHGSTFGGNP 260 (364)
T ss_pred C-----CCc---hhHHHhcCCCCCEEEec--ccccCCceeEEEEeccc-cc-------C----C------CcCCCCCcCH
Confidence 3 111 122222333 777774 77555566777776543 21 0 0 1122222222
Q ss_pred ---HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCC
Q 009181 395 ---AGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQ 471 (541)
Q Consensus 395 ---a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~ 471 (541)
++..++++.+.++++.+..++. +. .+.. |.+.-+ .....++.+.+.+ ....+.+.+.++|..+...+
T Consensus 261 ~~~aaa~a~l~~i~~~~l~~~~~~~------l~-~l~~-~~v~~v-RG~Gl~~gve~~~-~~~~i~~~~~~~Gll~~~~g 330 (364)
T PRK04013 261 LACKAVAVTLRILRRERLVEKAGEK------FI-EIKG-ERVVTT-RGRGLMIGIVLKK-PVGKYVEELQNRGYLVHTAG 330 (364)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHH------HH-Hhcc-Ccceee-eeCcEEEEEEeCC-cHHHHHHHHHhCCcEEeeCC
Confidence 3444555555555544443332 22 2222 221111 1123455555432 25678888999998775543
Q ss_pred CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 472 RPNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 472 ~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
.+.+|+.++...+ +++++++++|+++++++.
T Consensus 331 -~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 331 -QRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred -CCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 3689998876544 999999999999997653
No 356
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.52 E-value=9.6e-13 Score=135.81 Aligned_cols=369 Identities=15% Similarity=0.159 Sum_probs=241.3
Q ss_pred hhhhcccCCCccccccCCCCCCCCCCCc-HHHHHHHHHHhCCCCCCCCCceeeeecCCCCcccHHHHHHHHHHhh---cc
Q 009181 82 QKVVDKMQSGVKSKREGWWTELPRAGLG-VGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLINEACSMF---AH 157 (541)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~lP~~g~~-~~i~~~l~~~~~~~~~~~~~~~g~~y~~~~~~~~~~~~~~~~~~~~---~~ 157 (541)
+..+++..|... +......+| +|.. .|++++++....++.-|..++..+.|....+ +.++.+.+..- ..
T Consensus 77 ~~l~~~~VP~~I--r~~~~l~~~-~~~~E~eml~~l~~ia~kNk~~ksfIGmGYyn~~vP----~~I~RNilenp~W~Tq 149 (1001)
T KOG2040|consen 77 DELIEKTVPKSI--RLKRPLKMD-KPLCESEMLQHLEDIASKNKIWKSFIGMGYYNTHVP----AVILRNILENPGWYTQ 149 (1001)
T ss_pred HHHHHhhcchhh--cccchhcCC-CCcCHHHHHHHHHHHHhhhhHHHHhhccccccccCc----HHHHHHhhhCCcceec
Confidence 444444445444 334445554 5677 9999999999877778887776667777665 55666665443 23
Q ss_pred cCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc
Q 009181 158 TNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (541)
Q Consensus 158 ~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~ 237 (541)
.+|++++.++|-.+-....+.+++++.|+|-.+ . .+-.-||.|-...+++.+...+ .++++....|+
T Consensus 150 YTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aN----A--SLLDEgTAaaEAm~l~~~~~kr-------kk~vvd~~~hp 216 (1001)
T KOG2040|consen 150 YTPYQAEISQGRLESLLNYQTMITDLTGLPMAN----A--SLLDEGTAAAEAMALCNRINKR-------KKFVVDSNCHP 216 (1001)
T ss_pred cCCCchhhhhhhHHHHhhhHHhhhhccCCcccc----h--hhhccchhHHHHHHHHHhhccc-------ceEEecCCCCc
Confidence 367888999997777777999999999999876 3 4556667666666666654221 45999999999
Q ss_pred hHHHHHh----hcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcc
Q 009181 238 AYDKAAQ----YFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 238 s~~ka~~----~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~g 313 (541)
.....++ .+|+++...+. ++.. .-.++...+++..|.+ .|.+.|..++++++++.|..+++-.-.-
T Consensus 217 qtlsV~~TRa~~~~i~v~~~~~--------~~~~-~s~~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~atDLL 286 (1001)
T KOG2040|consen 217 QTLSVVKTRAKGFGIKVVVSDI--------KEAD-YSSKDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMATDLL 286 (1001)
T ss_pred chhhhhhccccccceeEEecCH--------HHhh-ccccceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEeehhh
Confidence 8665554 45666444332 2211 1235678889999987 8999999999999999998876544421
Q ss_pred cchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCC----CCCCCceEEEEecccccccc---cccccccCCCcc-----C
Q 009181 314 GFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYG----LAPKGTSVVLYRNREIRKHQ---FVAVTEWSGGLY-----V 381 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~----~~p~g~g~ll~~~~~~~~~~---~~~~~~~~~~~~-----~ 381 (541)
...+ + -|| ...|+|+...+.+.+| ||++-.|++.+++...+... .-...+-.|..- -
T Consensus 287 aLti--L------rpP---gefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQ 355 (1001)
T KOG2040|consen 287 ALTI--L------RPP---GEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQ 355 (1001)
T ss_pred HHHc--c------CCh---hhcCceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHH
Confidence 1111 0 112 4568999999999884 33333455544433222110 000011011000 0
Q ss_pred CCcccCCCCC------------chHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecC
Q 009181 382 SPTVAGSRPG------------GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSD 449 (541)
Q Consensus 382 ~~~~~gsr~~------------~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~ 449 (541)
+..+.-+|.. +.+++.|+. ++|.+|++++.+++...+-+|...|++. |-++...+.+-.+.+++.
T Consensus 356 TREQHIrRDKATSNICTAQALLANmaAmyai--YHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~fFDTLkI~~~ 432 (1001)
T KOG2040|consen 356 TREQHIRRDKATSNICTAQALLANMAAMYAI--YHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHKPFFDTLKIRCG 432 (1001)
T ss_pred HHHHHhhhhccchhhhHHHHHHHHHHHHHhh--hcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhccccccceEEEEec
Confidence 0001111211 223344433 4799999999999999999999999986 788888888888888876
Q ss_pred CCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHH
Q 009181 450 VVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLR 496 (541)
Q Consensus 450 ~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~ 496 (541)
. +..++.++..++++.+..+. .+.+-+++-...+ +|+|.++..+.
T Consensus 433 ~-s~~~~l~rA~~~~iNlr~~e-d~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 433 C-SAEEVLDRAAKRQINLRLVE-DGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred C-cHHHHHHHHHhhcCceEEee-cCceEEeecccccHHHHHHHHHHHc
Confidence 5 78899999999987765443 2457777776555 89999988776
No 357
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.51 E-value=2.6e-11 Score=129.01 Aligned_cols=296 Identities=19% Similarity=0.157 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhcCC-
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFNI- 248 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~G~- 248 (541)
+.+.++.+.+++++..+..+ .+ .++++||||+..|++.+|.+.. +++|+.-..+|.. ...+....+-
T Consensus 97 ~~~~~la~~L~~~~p~~~~~---~v--~f~~sGseA~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~~ls~~~~~ 165 (451)
T PRK06918 97 EPYIELAEKLAALAPGSFDK---KV--LFLNSGAEAVENAVKIARKYTK------RQGIISFSRGFHGRTLMTMTMTSKV 165 (451)
T ss_pred HHHHHHHHHHHHhCCCCCCC---EE--EEcCCcHHHHHHHHHHHHHHhC------CCcEEEECCCcCccchhhhhhcCCC
Confidence 44556777888887543212 25 8999999999999999997532 2567766655444 3333322221
Q ss_pred ------------eEEEeeCCCCC----ccC--------HHHHHHhh----c-cCceEEEeecCCCCCccccC----HHHH
Q 009181 249 ------------KLWRVPVDKEF----RAD--------VKAIKKYI----N-RNTVLIVGSAPGFPHGIIDP----IQEL 295 (541)
Q Consensus 249 ------------~v~~v~~~~~~----~~d--------~~~Le~~i----~-~~t~~vv~~~~~~~~G~id~----i~~I 295 (541)
.+..+|....+ .+. .+.+++.+ . +++.+|++.......|.+.+ +++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l 245 (451)
T PRK06918 166 KPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEV 245 (451)
T ss_pred ccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHH
Confidence 23344432111 010 22344433 2 35677777776665576543 8899
Q ss_pred HHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEeccccccccccccc
Q 009181 296 GELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVT 373 (541)
Q Consensus 296 ~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~ 373 (541)
.++|++||+++++|+++.|+.. .|. .+.+...+ .|.+++ .|.+.++..+|+++.+++ +......
T Consensus 246 ~~l~~~~gillI~DEV~tg~gr-----~g~---~~a~~~~~v~pDi~t~--sK~l~~G~pig~v~~~~~-i~~~~~~--- 311 (451)
T PRK06918 246 RNICSEHGILFVADEIQTGFAR-----TGK---YFAIEHFDVVPDLITV--SKSLGAGVPISGVIGRKE-IMDESAP--- 311 (451)
T ss_pred HHHHHHcCCEEEEeccccCcCc-----cCc---eehhHhcCCCCCEEee--ehhhcCCCccEEEEEcHH-HHhccCC---
Confidence 9999999999999999988743 111 11111122 365544 588666677898777543 3221110
Q ss_pred ccCCCccCCCcccCCCCCchHHHHHH---HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC----CCeEEecCCCeeEEEE
Q 009181 374 EWSGGLYVSPTVAGSRPGGLIAGAWA---ALMSLGQEGYLENTKAIMEVSESIQKGIKEI----PELFIIGRPDMTIVAF 446 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~~a~~~~---al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~f 446 (541)
...++..++...++.+ +++.+..++ ..++..++.+++.+.|+++ +.+.-+. +...++.+
T Consensus 312 ----------~~~~~T~~g~~l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~~~~~vr-g~G~~~~~ 377 (451)
T PRK06918 312 ----------GELGGTYAGSPLGCAAALAVLDIIEKEN---LNDRAIELGKVVMNRFEEMKNKYNCIGDVR-GLGAMCAF 377 (451)
T ss_pred ----------CCcCcCCCcCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhhCCCceeec-cceeEEEE
Confidence 0011222222334444 444443333 3444555556666666543 2222221 23444444
Q ss_pred ecC-C----C----CHHHHHHHHHhCCceeccCC-CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHHcC
Q 009181 447 GSD-V----V----DIFEVNDIMSSKGWHLNPLQ-RPNSIHICVTL-QHVAVVDVFLRDLRESVETVKQN 505 (541)
Q Consensus 447 ~~~-~----~----~~~~l~~~l~~~G~~~~~~~-~~~~iRi~~~~-~~~e~id~~i~~L~~~~~~l~~~ 505 (541)
... + . ....+.+.+.++|+.+...+ +++.+|++++. .+.+++++++++|+++++++.+.
T Consensus 378 ~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~~ 447 (451)
T PRK06918 378 ELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQACYEK 447 (451)
T ss_pred EEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHHHHh
Confidence 331 1 1 24567777889998765422 34789999876 44599999999999999887543
No 358
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.50 E-value=1.8e-11 Score=119.28 Aligned_cols=308 Identities=16% Similarity=0.159 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCccceEE--cCcHHHHHHHHHHHHHHHHHhhcCCCCCeEE---ecCCccchHHHH
Q 009181 168 SVARFEAEVIAMTAALLGNKEKASGGQVCGNM--TSGGTESILLAVKSSRDYMRNKRGITRPEMI---IPVSAHSAYDKA 242 (541)
Q Consensus 168 ~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~--t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi---~~~~~h~s~~ka 242 (541)
.+.++|.-+++.-.+.||++++. +|+- ..+||-||+.+-.++.. ++ ++|. .|+..|-+.-..
T Consensus 83 ~ID~iE~LCq~RALeaF~ldp~k-----WGVNVQp~SGSPANfavYtall~-----Ph---~RiMGLDLP~GGHLsHGy~ 149 (477)
T KOG2467|consen 83 YIDQIELLCQKRALEAFGLDPEK-----WGVNVQPYSGSPANFAVYTALLK-----PH---ERIMGLDLPSGGHLSHGYQ 149 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHH-----CceeeccCCCCchhhHHHhhhcC-----CC---CeeeeccCCCCCccccccc
Confidence 45678888888888999999876 5554 45688999888887764 44 5553 566667652211
Q ss_pred HhhcCC-------eEEEeeCCC-CCccCHHHHHHhh-ccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcc
Q 009181 243 AQYFNI-------KLWRVPVDK-EFRADVKAIKKYI-NRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 243 ~~~~G~-------~v~~v~~~~-~~~~d~~~Le~~i-~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~g 313 (541)
-.--.+ +-....+|+ +|-+|-|.||+.- .=+|+++++ +.+.....-|...+.++|.+.|..|.+|.|+=
T Consensus 150 T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iia--G~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHI 227 (477)
T KOG2467|consen 150 TPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIA--GTSAYSRLIDYARFRKIADKVGAYLMADMAHI 227 (477)
T ss_pred cCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEe--ccccchhhccHHHHHHHHHhcCceeehhhhhH
Confidence 111111 111123354 8999999998754 447777664 33445667889999999999999999999985
Q ss_pred cchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecc--cccccc-cccccccC--CCccCCCcccCC
Q 009181 314 GFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNR--EIRKHQ-FVAVTEWS--GGLYVSPTVAGS 388 (541)
Q Consensus 314 g~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~--~~~~~~-~~~~~~~~--~~~~~~~~~~gs 388 (541)
.+++. .|.-..||++ .|+++.++||.+-||.| |+++||.. ..-..+ ....-++. -....-|.+.|.
T Consensus 228 SgLVA----A~vipsPFey----~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGG 298 (477)
T KOG2467|consen 228 SGLVA----AGVIPSPFEY----CDIVTTTTHKSLRGPRG-AMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGG 298 (477)
T ss_pred HHHHh----cccCCCcccc----cceeeccccccccCCcc-eeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCC
Confidence 55442 2321124544 59999999999878775 55677752 111010 00000000 001123455565
Q ss_pred CCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC-CCeeEEEEecC--CCCHHHHHHHHHhCCc
Q 009181 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR-PDMTIVAFGSD--VVDIFEVNDIMSSKGW 465 (541)
Q Consensus 389 r~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~f~~~--~~~~~~l~~~l~~~G~ 465 (541)
.-...|+++..||+.-....|++..++..++++.|.+.|.+. |++++.. .+.++|.+.+. +.+..++...+..-++
T Consensus 299 PHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I 377 (477)
T KOG2467|consen 299 PHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHI 377 (477)
T ss_pred CCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccccCCchHHHHHHHHHhhh
Confidence 555668899999998888899999999999999999999998 8888753 34566666554 4454444444443333
Q ss_pred eecc--------CCCCCeEEEEecCCCH-----HHHHHHHHHHHHHHH
Q 009181 466 HLNP--------LQRPNSIHICVTLQHV-----AVVDVFLRDLRESVE 500 (541)
Q Consensus 466 ~~~~--------~~~~~~iRi~~~~~~~-----e~id~~i~~L~~~~~ 500 (541)
.++. .-.|+.+|+..+.+++ +|.++..+-|.++++
T Consensus 378 ~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 378 ALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred hhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 3221 1236889997666554 677777777777665
No 359
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.49 E-value=3.5e-11 Score=127.09 Aligned_cols=285 Identities=19% Similarity=0.226 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhcCC--
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFNI-- 248 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~G~-- 248 (541)
.+.++.+.+.+++.. .+. + .|+++||||+..|++.+|.+. | +++|+.-..+|.. ..-+....|.
T Consensus 94 ~~~~la~~l~~~~p~-~~~----v--~f~~sGseA~e~AlklAr~~t----g--r~~ii~~~~~yHG~t~~~~~~~~~~~ 160 (428)
T PRK12389 94 LEIEFAKMLKEAIPS-LEK----V--RFVNSGTEAVMTTIRVARAYT----G--RTKIIKFAGCYHGHSDLVLVAAGSGP 160 (428)
T ss_pred HHHHHHHHHHHhCCC-CcE----E--EEeCCHHHHHHHHHHHHHHhh----C--CCEEEEECCCcCCChHHHHHhcCCcc
Confidence 345567777777642 222 4 899999999999999999763 2 2567665555444 3333333221
Q ss_pred -----------------eEEEeeCCCCCccCHHHHHHhhc---cCceEEEeecCCCCCccccC----HHHHHHHHHHcCC
Q 009181 249 -----------------KLWRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP----IQELGELALSHGT 304 (541)
Q Consensus 249 -----------------~v~~v~~~~~~~~d~~~Le~~i~---~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i 304 (541)
.+..+|.+ |++.+++.+. +++.+|++.......|.+.| +++|.++|++||+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~ 235 (428)
T PRK12389 161 STLGTPDSAGVPKSIAQEVITVPFN-----DIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGA 235 (428)
T ss_pred cccCCCCCCCCCCcccCceEEcCCC-----CHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 12222222 7899998885 35788888888888898887 9999999999999
Q ss_pred EEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCC
Q 009181 305 CLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVS 382 (541)
Q Consensus 305 ~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~ 382 (541)
.+++|+++.|| .- +. .+.....| .|.+++ -|.+.++...|+++.+ +++...... .+
T Consensus 236 llI~DEV~tG~-Rt-----~~---~~a~~~~gv~PDivt~--gK~lggG~Pi~av~~~-~~i~~~~~~-----~~----- 293 (428)
T PRK12389 236 LVIYDEVITAF-RF-----MY---GGAQDLLGVEPDLTAL--GKIIGGGLPIGAYGGR-KDIMEQVAP-----LG----- 293 (428)
T ss_pred EEEEEcccccc-cc-----Cc---chhhHHhCCCCCeeee--chhhcCCCceeEEeEH-HHHHhhhcc-----CC-----
Confidence 99999999887 31 00 00011122 366655 4876555667877654 333322100 00
Q ss_pred CcccCCCCCch---HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhc----CCC-eEEecCCCeeEEEEecCCC---
Q 009181 383 PTVAGSRPGGL---IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKE----IPE-LFIIGRPDMTIVAFGSDVV--- 451 (541)
Q Consensus 383 ~~~~gsr~~~~---~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~v~~~~~~~~v~f~~~~~--- 451 (541)
+...++..+.. .++..++++.+..+ +..++..++.++|++.|++ .|- ..+.......-+.|.....
T Consensus 294 ~~~~~~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g~~gi~~~~~~~~~~ 370 (428)
T PRK12389 294 PAYQAGTMAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGITITINRLKGALTVYFTDEKVTNY 370 (428)
T ss_pred CcccccCCccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCcEEEEEEeCCCCCCh
Confidence 01112221111 33445555555433 4666777788888888775 332 2222222222223322111
Q ss_pred ------C---HHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 452 ------D---IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 452 ------~---~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
+ ...+.+.|.++|+.+...+.+ .+.++.+ .+.+|++++++.+++++++
T Consensus 371 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-~~~~~l~-~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 371 DQAERSDGEAFGKFFKLMLNQGINLAPSKYE-AWFLTTA-HTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred hhhcccCHHHHHHHHHHHHHCCcEeecCCCC-CeeecCC-CCHHHHHHHHHHHHHHHHh
Confidence 1 346778888999877654432 3333322 2349999999999999864
No 360
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.49 E-value=2.2e-11 Score=128.46 Aligned_cols=301 Identities=15% Similarity=0.129 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCC-CCCeEEecCCccch-HHHHHhhcCC--
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSA-YDKAAQYFNI-- 248 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi-~~~~vi~~~~~h~s-~~ka~~~~G~-- 248 (541)
..++.+.++++++.+-+. + .++++||+|+..|++.+|.+... +|. .+.+|+.-..+|.. ..-+....|-
T Consensus 90 ~~~la~~l~~~~~~~~~~----v--~f~~sGseA~e~AlklAr~~~~~-~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~ 162 (427)
T TIGR00508 90 AIELCQKLVKMTPNALDC----V--FLADSGSVAVEVALKMALQYWQA-KGEKNRQKFLTIRSGYHGDTFGAMSVCDPEN 162 (427)
T ss_pred HHHHHHHHHhhCCCCCCE----E--EEeCCcHHHHHHHHHHHHHHHHh-hCCCCccEEEEEcCCcCCccHhhhcccCCcc
Confidence 345666777777543232 4 89999999999999999976432 221 13567666655443 3223222221
Q ss_pred -----------eEEEeeCCC-CC-----ccCHHHHHHhhc---cCceEEEeecC-CCCCccc----cCHHHHHHHHHHcC
Q 009181 249 -----------KLWRVPVDK-EF-----RADVKAIKKYIN---RNTVLIVGSAP-GFPHGII----DPIQELGELALSHG 303 (541)
Q Consensus 249 -----------~v~~v~~~~-~~-----~~d~~~Le~~i~---~~t~~vv~~~~-~~~~G~i----d~i~~I~~la~~~~ 303 (541)
.+..+|... .+ .-|.+++++++. ++..+|++... ...-|.+ ..+++|.++|++||
T Consensus 163 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~ 242 (427)
T TIGR00508 163 SMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYD 242 (427)
T ss_pred cccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 112222211 11 115677788875 34667777764 4444443 45899999999999
Q ss_pred CEEEEeCCcccchhhhhhhcCCCCCCCCcCCC--CceEEEeCCCCCCCCCC-CceEEEEecccccccccccccccCCCcc
Q 009181 304 TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQ--GVTSISVDVHKYGLAPK-GTSVVLYRNREIRKHQFVAVTEWSGGLY 380 (541)
Q Consensus 304 i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~--gvdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~~~~~~~~~~~~~~ 380 (541)
+.+++|+++.|+.. .|. .+..... ..|++++ .|.+.++. .++.++.+++ +..... ... .+...
T Consensus 243 ~llI~DEv~tG~Gr-----~G~---~~~~~~~~v~pDi~~~--gK~l~gG~~p~~a~~~~~~-~~~~~~-~~~--~~~~~ 308 (427)
T TIGR00508 243 ILLIADEIATGFGR-----TGK---LFACEHAGVVPDILCV--GKALTGGYMTLSATVTTDK-VAQTIS-SGE--AGCFM 308 (427)
T ss_pred CEEEEeccccCCCc-----CCc---cchhhhcCCCCCEEEe--chhhhcCcccceEEEEcHH-HHHHHh-cCC--CCccc
Confidence 99999999866532 121 1111112 2477764 58765543 4565555433 221110 000 00000
Q ss_pred CCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC--CCeeEEEEecCC-CCHHHHH
Q 009181 381 VSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR--PDMTIVAFGSDV-VDIFEVN 457 (541)
Q Consensus 381 ~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~f~~~~-~~~~~l~ 457 (541)
...+..|.. ...++..++++.+..+ +..++..++.++|++.|+++.....+.. ....++.+.+.+ .+...+.
T Consensus 309 ~~~T~~g~p--~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~ 383 (427)
T TIGR00508 309 HGPTFMGNP--LACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPVNVEELQ 383 (427)
T ss_pred cCCCCCcCH--HHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCccCHHHHH
Confidence 111111221 1133555566555433 4467888888889888877522111211 123445554433 3567889
Q ss_pred HHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 458 DIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 458 ~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
+.|.++|+.+...+ +.+|++++..++ +|+|++++.+++++.+
T Consensus 384 ~~l~~~Gv~~~~~~--~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 384 KKFVEQGVWIRPFG--KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred HHHHHCCeEEEecC--CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 99999998876543 479998886666 9999999999999854
No 361
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.48 E-value=2.1e-11 Score=129.47 Aligned_cols=298 Identities=18% Similarity=0.190 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHHhCCCCC-CCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH-HHHhhcC-
Q 009181 171 RFEAEVIAMTAALLGNKEK-ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD-KAAQYFN- 247 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~-~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~-ka~~~~G- 247 (541)
..+.++.+.+++++..... . .+ -.++++||||+..|++.+|.+. | +++|+.-..+|.... -+....|
T Consensus 101 ~~~~~lAe~L~~~~p~~~~~~---~~-~f~~~SGsEAve~AlklAr~~t----g--r~~Ii~~~~~yHG~t~~als~t~~ 170 (459)
T PRK06931 101 PLKDAFSEYLLSLLPGQGKEY---CL-QFTGPSGADAVEAAIKLAKTYT----G--RSNVISFSGGYHGMTHGALAVTGN 170 (459)
T ss_pred HHHHHHHHHHHHhCCCccccc---eE-EEeCCCcHHHHHHHHHHHHHhc----C--CCeEEEECCCcCCccHHHHhhcCC
Confidence 4555677788888753321 1 01 1456899999999999999752 2 356777666655433 3332221
Q ss_pred -----------CeEEEeeCCCCCcc--------CHHHH----HHhhc------cCceEEEeecCCCCCccccC----HHH
Q 009181 248 -----------IKLWRVPVDKEFRA--------DVKAI----KKYIN------RNTVLIVGSAPGFPHGIIDP----IQE 294 (541)
Q Consensus 248 -----------~~v~~v~~~~~~~~--------d~~~L----e~~i~------~~t~~vv~~~~~~~~G~id~----i~~ 294 (541)
..+..+|....++. +.+.+ ++.++ +++.+|++......-|.+.+ +++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~ 250 (459)
T PRK06931 171 LSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQK 250 (459)
T ss_pred cccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHH
Confidence 13445554322111 22332 33333 24788888877776777654 899
Q ss_pred HHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEecccccccccccc
Q 009181 295 LGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAV 372 (541)
Q Consensus 295 I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~ 372 (541)
+.++|++||+++++|+++.||-. .|. .+.+...|+ |++++. |.+.++..+|+++.++ ++ . .+ .
T Consensus 251 lr~lc~~~g~LlI~DEV~tGfGR-----tG~---~~a~~~~gv~PDivt~g--K~l~gG~Pi~av~~~~-~~-~-~~--~ 315 (459)
T PRK06931 251 IREVTQKHGILLIVDEVQAGFAR-----TGK---MFAFEHAGIEPDIIVMS--KAVGGGLPLAVLGIKK-EF-D-AW--Q 315 (459)
T ss_pred HHHHHHHcCCEEEEecchhcCCc-----Cch---HHHhhhcCCCCCEEEec--ccccCCcceeeeeeHH-HH-h-hc--c
Confidence 99999999999999999987742 111 112222333 888775 7765556678766653 22 1 11 0
Q ss_pred cccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecC--CCeeEEEEecC
Q 009181 373 TEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGR--PDMTIVAFGSD 449 (541)
Q Consensus 373 ~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~f~~~ 449 (541)
. + ..++.+++...++-+++..+..-.-.+..++..++.++|.+.|+++ ....++.. ....++.+.+.
T Consensus 316 ~----~------~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~ 385 (459)
T PRK06931 316 P----G------GHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIV 385 (459)
T ss_pred C----C------CCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEc
Confidence 0 0 1122222223344444443332222345667777777777777654 11112222 12344444432
Q ss_pred CC------------C---HHHHHHHHHhCCceeccCC-CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 450 VV------------D---IFEVNDIMSSKGWHLNPLQ-RPNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 450 ~~------------~---~~~l~~~l~~~G~~~~~~~-~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
+. + ...+...+.++|+.+...+ .++.+|+.++...+ +|+|++++.++++++++.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 386 DERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred cCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 10 1 2456677889998775433 35789998887665 999999999999997754
No 362
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.47 E-value=1.7e-11 Score=130.12 Aligned_cols=286 Identities=19% Similarity=0.195 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH-HHHhhc---
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD-KAAQYF--- 246 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~-ka~~~~--- 246 (541)
..+.++.+.+++.+.. .+. + .|+++||||+..|++.+|.+. | +++|+.-..+|..+. ......
T Consensus 139 ~~~~~lAe~l~~~~p~-~~~----v--~f~~SGsEA~e~AlklAR~~t----g--r~~Ii~~~g~YHG~~~~~~~~~~~~ 205 (474)
T PLN02482 139 LLENVLAEMVIDAVPS-VEM----V--RFVNSGTEACMGVLRLARAYT----G--REKIIKFEGCYHGHADSFLVKAGSG 205 (474)
T ss_pred HHHHHHHHHHHHhCCC-CCE----E--EEeCChHHHHHHHHHHHHHhc----C--CCEEEEECCccCCCcchhhhhcCCC
Confidence 4566778888888743 222 5 899999999999999999752 2 356776555544432 111100
Q ss_pred ----------CC------eEEEeeCCCCCccCHHHHHHhhc---cCceEEEeecCCCCCccccC----HHHHHHHHHHcC
Q 009181 247 ----------NI------KLWRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP----IQELGELALSHG 303 (541)
Q Consensus 247 ----------G~------~v~~v~~~~~~~~d~~~Le~~i~---~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~ 303 (541)
|+ .+..+|.+ |++++++.+. ++..+|++.......|.+.| +++|.++|++||
T Consensus 206 ~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g 280 (474)
T PLN02482 206 VATLGLPDSPGVPKAATSATLTAPYN-----DLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENG 280 (474)
T ss_pred ccccCCCCCCCCCCCCCCCeEEecCC-----ChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 11 12223322 7899998886 34778888888777888766 668999999999
Q ss_pred CEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccC
Q 009181 304 TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYV 381 (541)
Q Consensus 304 i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~ 381 (541)
++|++|+++.||-.. ..| .....| .|.+++ -|.+.++..+|+++.+ +++...... .+
T Consensus 281 ~lLI~DEV~tGfR~g---~~g------a~~~~gv~PDi~t~--gK~lggG~Pigav~g~-~ei~~~~~~------~~--- 339 (474)
T PLN02482 281 ALLVFDEVMTGFRIA---YGG------AQEYFGITPDLTTL--GKVIGGGLPVGAYGGR-REIMEMVAP------AG--- 339 (474)
T ss_pred CEEEEeccccCeecC---cch------HhHHhCCCCCEEEe--cchhhCCCceEEEEEc-HHHHHhhcc------CC---
Confidence 999999998776221 111 011122 366665 4886666668877554 343322100 00
Q ss_pred CCcccCCCCCch---HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-C--CeEEe-cCCC-eeEEEEecCC---
Q 009181 382 SPTVAGSRPGGL---IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-P--ELFII-GRPD-MTIVAFGSDV--- 450 (541)
Q Consensus 382 ~~~~~gsr~~~~---~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~--~~~v~-~~~~-~~~v~f~~~~--- 450 (541)
+...++.+++. .++..++|+.+.. .+..++..++.++|++.|+++ . ++.+. +... ..-+.|...+
T Consensus 340 -~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~ 415 (474)
T PLN02482 340 -PMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYN 415 (474)
T ss_pred -CcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccC
Confidence 11111222222 2344455555533 356777777888888888764 1 22332 2212 1122232111
Q ss_pred ------CC---HHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 451 ------VD---IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 451 ------~~---~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
.+ ...+.+.|.++|+.+...+.+. ++ ++..++ +|+|++++.++++++++
T Consensus 416 ~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~--~~-psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 416 FADAKKSDTAKFARFHRGMLEEGVYLAPSQFEA--GF-TSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred hhhhccCCHHHHHHHHHHHHHCCeEEeccCCCC--Cc-CCCCCCHHHHHHHHHHHHHHHHhC
Confidence 11 2467788899998876554432 11 333344 99999999999998653
No 363
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.46 E-value=2.5e-11 Score=128.20 Aligned_cols=290 Identities=19% Similarity=0.210 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhc-C--
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF-N-- 247 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~-G-- 247 (541)
..+.++.+++++++.. .+. + .++++|++|+..|+++++.+. | +++|+..+.+|......+... |
T Consensus 90 ~~~~~la~~L~~~~~~-~~~----v--~~~~sGseA~e~Aik~a~~~~----g--~~~ii~~~~~yHG~t~~~~~~~~~~ 156 (426)
T PRK00062 90 ELEVELAELVIELVPS-IEM----V--RMVNSGTEATMSAIRLARGYT----G--RDKIIKFEGCYHGHADSLLVKAGSG 156 (426)
T ss_pred HHHHHHHHHHHHhCCC-CCE----E--EEecCHHHHHHHHHHHHHHHh----C--CCeEEEEcCccCCchhhhhhccCcc
Confidence 3445677788877632 222 5 899999999999999998752 2 267877777666544222111 1
Q ss_pred ----------Ce-------EEEeeCCCCCccCHHHHHHhhcc---CceEEEeecCCCCCccccC----HHHHHHHHHHcC
Q 009181 248 ----------IK-------LWRVPVDKEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP----IQELGELALSHG 303 (541)
Q Consensus 248 ----------~~-------v~~v~~~~~~~~d~~~Le~~i~~---~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~ 303 (541)
.. ...+|. -|++++++.+.+ ++.+|++.......|.+.+ +++|.++|++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~ 231 (426)
T PRK00062 157 AATLGLPDSPGVPEDFAKHTLTAPY-----NDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHG 231 (426)
T ss_pred ccccCCCCCCCCCcccccceEEcCC-----CCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 00 111111 278999998853 6788888877777898887 999999999999
Q ss_pred CEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccC
Q 009181 304 TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYV 381 (541)
Q Consensus 304 i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~ 381 (541)
+++++|+++.|+-. ...+. ....+ .|.+ +..|.+.++...|+++.+ +++....... +..+.
T Consensus 232 ~llI~DEv~~G~r~---g~~~~------~~~~~~~pDi~--~~gK~l~~G~p~ga~~~~-~~i~~~~~~~-----~~~~~ 294 (426)
T PRK00062 232 ALLIFDEVMTGFRV---ALGGA------QGYYGVTPDLT--TLGKIIGGGLPVGAFGGR-REIMEQLAPL-----GPVYQ 294 (426)
T ss_pred CEEEEeechhcccc---CCccH------HHHhCCCcchH--hhhhHhhCCCcceeeeEH-HHHHHhhccC-----CCcee
Confidence 99999999987622 11110 01112 2443 345875544457766554 4433221100 00000
Q ss_pred CCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC---CCeEEecCCCeeEEEEecCCC-------
Q 009181 382 SPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI---PELFIIGRPDMTIVAFGSDVV------- 451 (541)
Q Consensus 382 ~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~f~~~~~------- 451 (541)
..+..+... ..++..++++.+..+ +..++..++.+++++.|+++ -++..-......++.+.+.+.
T Consensus 295 ~~T~~~~p~--~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~ 369 (426)
T PRK00062 295 AGTLSGNPL--AMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYAD 369 (426)
T ss_pred cccCcCCHH--HHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhh
Confidence 011112211 133445555554333 45666666777777766542 133221223444544443211
Q ss_pred ----C---HHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 452 ----D---IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 452 ----~---~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
+ ...+.+.|.++|+.+...+. +.++++.+ .+.++++++++.|+++++++
T Consensus 370 ~~~~~~~~~~~i~~~l~~~Gv~v~~~~~-~~~~~~~~-~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 370 AKKSDTERFARFFHAMLDEGVYLAPSQF-EAGFVSAA-HTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred hccccHHHHHHHHHHHHHCCeEeecCCc-Cceeeecc-CCHHHHHHHHHHHHHHHHhh
Confidence 1 25788889999987765443 45677643 24599999999999998764
No 364
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.45 E-value=6.4e-11 Score=124.68 Aligned_cols=290 Identities=17% Similarity=0.170 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH----HHHhhcC
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD----KAAQYFN 247 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~----ka~~~~G 247 (541)
.+.++.+.+.++++..... + .|+++||||+..|++.+|.+. | +++|+.-..+|..+. .+....+
T Consensus 94 ~~~~la~~L~~~~~~~~~~----v--~f~~SGsEA~e~AiklAr~~t----g--r~~ii~~~~~yHG~td~~~~~~~~~~ 161 (433)
T PRK00615 94 QEILFAEELFSYLGLEDHK----I--RFVSSGTEATMTAVRLARGIT----G--RSIIIKFLGCYHGHADTLLQGISFSE 161 (433)
T ss_pred HHHHHHHHHHHhCCCCcCE----E--EEeCchHHHHHHHHHHHHHhh----C--CCEEEEEcCccCCCCcccCcccccCC
Confidence 4455677777877543222 5 899999999999999999752 2 256665554443321 1111111
Q ss_pred Ce----------------EEEeeCCCCCccCHHHHHHhhc---cCceEEEeecCCCCCccccC----HHHHHHHHHHcCC
Q 009181 248 IK----------------LWRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP----IQELGELALSHGT 304 (541)
Q Consensus 248 ~~----------------v~~v~~~~~~~~d~~~Le~~i~---~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i 304 (541)
-. ...+|. -|.+++++.+. +++.+|++.......|.+.| +++|.++|++||+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~ 236 (433)
T PRK00615 162 TSLDTLTHLVDTDLAHPLTLSLPY-----NDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGS 236 (433)
T ss_pred CCcCcCCCCCCCCCCCCCeEeCCC-----CCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 00 011111 27889998885 34678888888777788776 5699999999999
Q ss_pred EEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCc
Q 009181 305 CLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPT 384 (541)
Q Consensus 305 ~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (541)
++++|+++.|+-. ...|. ...++. ..|++++ .|.+.++..+|+++.+++ +...... .+..+...+
T Consensus 237 llI~DEv~tG~R~---G~~ga-~~~~gv---~PDi~~~--gK~lggG~p~~av~~~~~-i~~~~~~-----~~~~~~~~T 301 (433)
T PRK00615 237 LSIMDEVVTGFRV---AQGGA-AAIYHV---KPDITVY--GKILGGGLPAAAVVAHKS-IMDHLAP-----EGTIFQAGT 301 (433)
T ss_pred EEEEEcccccccc---cHhHH-HHhcCC---CCCeEEE--cccccCCcceeeeeecHH-HHhhhcC-----CCCcccCCC
Confidence 9999999976611 11110 001111 2366664 587554455676666543 3221100 000001111
Q ss_pred ccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC---CC--eEEecCCCeeEEEEecCCC--------
Q 009181 385 VAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI---PE--LFIIGRPDMTIVAFGSDVV-------- 451 (541)
Q Consensus 385 ~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~---~~--~~v~~~~~~~~v~f~~~~~-------- 451 (541)
..|.. ...++..++++.+.++ +..++..++.++|.+.|++. .+ +.... ...++.+.+.+.
T Consensus 302 ~~g~p--~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r--~G~~~~i~~~~~~~~~~~~~ 374 (433)
T PRK00615 302 LSGNP--LAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR--YGSMFSFFFNENRPNNLAEA 374 (433)
T ss_pred CcccH--HHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe--eceEEEEEEeCCCCCChHHH
Confidence 11111 1134555566555433 34666666677776655542 12 33333 334444443211
Q ss_pred ---C---HHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 009181 452 ---D---IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 452 ---~---~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l 502 (541)
+ ...+...|.++|+.+.....+.. -++..+ +++|+|+++++++++++.+
T Consensus 375 ~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~-~ls~~h-t~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 375 QLSDIEAFQTFYQSAFSKGVYLSPSPFEAS-FLSSAH-SMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred hhCCHHHHHHHHHHHHHCCeeecCcccccc-ceecCC-CHHHHHHHHHHHHHHHHHH
Confidence 1 23677888899987765443331 233332 3499999999999998765
No 365
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.44 E-value=3.6e-11 Score=127.27 Aligned_cols=299 Identities=17% Similarity=0.145 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHh---hcCC---CCCeEEecCCccch-HHHHHhh
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRN---KRGI---TRPEMIIPVSAHSA-YDKAAQY 245 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~---~~Gi---~~~~vi~~~~~h~s-~~ka~~~ 245 (541)
..++.+.++++.+-+..+ .+ .|+++|+||+..|++.+|.+... .+|. .+.+|+.-..+|.. ..-+...
T Consensus 94 ~~~la~~l~~~~~p~~~~---~v--~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~ 168 (443)
T PRK08297 94 MARFVDTFARVLGDPELP---HL--FFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSL 168 (443)
T ss_pred HHHHHHHHHhhcCCCCCC---EE--EEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhh
Confidence 334555666665311112 25 89999999999999999976421 1343 14667766665444 3333333
Q ss_pred cCCe-----------EEEeeCCC-C----C----------ccCHHHHHHhhc---cCceEEEeecCCCCCccccC----H
Q 009181 246 FNIK-----------LWRVPVDK-E----F----------RADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP----I 292 (541)
Q Consensus 246 ~G~~-----------v~~v~~~~-~----~----------~~d~~~Le~~i~---~~t~~vv~~~~~~~~G~id~----i 292 (541)
.|.. ...+|... . . .-+++++++.+. +++.+|++......-|.+.+ +
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl 248 (443)
T PRK08297 169 TNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFF 248 (443)
T ss_pred cCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHH
Confidence 2210 00111110 0 0 013456677775 46888998888777787633 8
Q ss_pred HHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccc
Q 009181 293 QELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFV 370 (541)
Q Consensus 293 ~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~ 370 (541)
++|.++|++||+++++|+++.||-. .|. .+.+...| .|.+++ -|.+ | .|.++.+++ +....
T Consensus 249 ~~lr~lc~~~g~llI~DEV~tGfGR-----tG~---~~a~~~~gv~PDiv~~--gK~l--~--~~a~l~~~~-i~~~~-- 311 (443)
T PRK08297 249 AAMRELCDEHDALLIFDEVQTGVGL-----TGT---AWAYQQLGVRPDIVAF--GKKT--Q--VCGIMAGRR-VDEVE-- 311 (443)
T ss_pred HHHHHHHHHcCCEEEEechhhccCc-----cch---HHHHHhcCCCCCEEEe--cccc--c--ccceecchH-HHHhh--
Confidence 9999999999999999999977632 110 01111122 377775 4763 2 233455443 11000
Q ss_pred cccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC----CCe--EEecCCCeeEE
Q 009181 371 AVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI----PEL--FIIGRPDMTIV 444 (541)
Q Consensus 371 ~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~----~~~--~v~~~~~~~~v 444 (541)
...+... ...++.++...+++.+++..+..-.-.+..++..++.+++.+.|+++ |.+ .+- ....++
T Consensus 312 -~~~~~~~-----~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vr--g~G~~~ 383 (443)
T PRK08297 312 -DNVFAVS-----SRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVR--GRGLMC 383 (443)
T ss_pred -hhhccCc-----cccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeee--ccceEE
Confidence 0001000 01122222223344444444432222356677777777777777653 333 222 235666
Q ss_pred EEecCCC-CHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHH
Q 009181 445 AFGSDVV-DIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETV 502 (541)
Q Consensus 445 ~f~~~~~-~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l 502 (541)
.+.+.+. ....+.+.+.++|+.+...+ ...+|++++..++ +|+|++++.|+++++++
T Consensus 384 ~i~~~~~~~~~~~~~~l~~~Gvl~~~~~-~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 384 AFDLPTTADRDEVIRRLWEEGVLVLPCG-ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred EEEecCHHHHHHHHHHHHHCCEEEecCC-CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 6666432 24578888999998775433 3579998876655 99999999999998765
No 366
>PRK06148 hypothetical protein; Provisional
Probab=99.41 E-value=7.7e-11 Score=136.11 Aligned_cols=299 Identities=17% Similarity=0.137 Sum_probs=176.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhc---
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYF--- 246 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~--- 246 (541)
+.+.++.+.+++++..+.+. + .|+++||||+..|++.+|.+. | +++|+.-..+|.. ...+....
T Consensus 663 ~~~~~lAe~L~~~~p~~~~~----v--~f~nSGsEA~e~AlklAr~~t----G--r~~ii~~~~~YHG~t~~a~s~s~~~ 730 (1013)
T PRK06148 663 DAIVAYAERLTATLPDGLTV----A--FFVNSGSEANSLALRLARAHT----G--QRDAIVLDHAYHGTTTELIDLSPYK 730 (1013)
T ss_pred HHHHHHHHHHHHhCCCCcCE----E--EEeCCcHHHHHHHHHHHHHhc----C--CCeEEEEcCCccCCCcchhhcCchh
Confidence 34456777788777533232 4 899999999999999999752 2 2557665555443 22222211
Q ss_pred -----C----CeEEEeeCCCCCc-----cC-------HHHHHHhhc------cCceEEEeecCCCCCccccC----HHHH
Q 009181 247 -----N----IKLWRVPVDKEFR-----AD-------VKAIKKYIN------RNTVLIVGSAPGFPHGIIDP----IQEL 295 (541)
Q Consensus 247 -----G----~~v~~v~~~~~~~-----~d-------~~~Le~~i~------~~t~~vv~~~~~~~~G~id~----i~~I 295 (541)
+ -.+..++....++ -+ .+.+++++. +++.+|++......-|.+.+ ++++
T Consensus 731 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~l 810 (1013)
T PRK06148 731 FNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREV 810 (1013)
T ss_pred hcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHH
Confidence 1 1222222211111 01 244555553 35788888887777787766 8999
Q ss_pred HHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEeccccccccccccc
Q 009181 296 GELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVT 373 (541)
Q Consensus 296 ~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~ 373 (541)
.++|++||+.++.|+++.||-. .|.. -+.+...|| |++++. |.+.++...|+++.+++ +....
T Consensus 811 r~lc~~~g~llI~DEVqtGfGR-----tG~~--~~a~e~~gv~PDivt~g--K~lggG~Plgav~~~~e-i~~~~----- 875 (1013)
T PRK06148 811 YAMVRAAGGVCIADEVQVGFGR-----VGSH--WWAFETQGVVPDIVTMG--KPIGNGHPMGAVVTTRE-IADSF----- 875 (1013)
T ss_pred HHHHHHhCCEEEEEecccCCCC-----CCCc--chhhhhcCCCcceeeec--ccccCCcceEEEEEcHH-HHhhc-----
Confidence 9999999999999999977632 2210 122233344 887774 88666677888777643 32211
Q ss_pred ccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecC--CCeeEEEEecCC
Q 009181 374 EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGR--PDMTIVAFGSDV 450 (541)
Q Consensus 374 ~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~f~~~~ 450 (541)
..+.. .++.+++..+++.+++..+..-.-++..++..++.++|++.|+++ ....+++. ..+.++.+.+..
T Consensus 876 --~~g~~-----~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~ 948 (1013)
T PRK06148 876 --DNGME-----YFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVT 948 (1013)
T ss_pred --cCCCc-----cccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecC
Confidence 00110 112222223344444444332222356677777888888888764 11222221 123344443321
Q ss_pred ------CC---HHHHHHHHHhCCceeccCC-CCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 451 ------VD---IFEVNDIMSSKGWHLNPLQ-RPNSIHICVTLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 451 ------~~---~~~l~~~l~~~G~~~~~~~-~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
.+ ...+.+.|.++|+.+...+ ..+.+|+.++...+ +++|++++.|+++++++.
T Consensus 949 ~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~~ 1012 (1013)
T PRK06148 949 DRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLAAAL 1012 (1013)
T ss_pred CccccCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 11 3467788999998876543 24789998887666 999999999999997653
No 367
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.41 E-value=1.1e-10 Score=123.18 Aligned_cols=295 Identities=13% Similarity=0.142 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhh-cCC--------------------CCC
Q 009181 169 VARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNK-RGI--------------------TRP 227 (541)
Q Consensus 169 ~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~-~Gi--------------------~~~ 227 (541)
..++.+.+.+.+++++..+.+. + .|+++|+||+..|++.+|.+.... ++. ++.
T Consensus 103 ~~~la~~l~~~l~~~~p~~~~~----v--~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~ 176 (464)
T TIGR00699 103 SKDWAKILKEGILKVAPKGQDQ----V--WTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDL 176 (464)
T ss_pred HHHHHHHHHHhHHhhCCCCcCE----E--EEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCC
Confidence 3444454555455665422232 5 899999999999999998764321 111 123
Q ss_pred eEEecCCccch-HHHHHhhcCC-----------eEEEeeCCC-CC-------------ccCHHHHHHhhc---cCceEEE
Q 009181 228 EMIIPVSAHSA-YDKAAQYFNI-----------KLWRVPVDK-EF-------------RADVKAIKKYIN---RNTVLIV 278 (541)
Q Consensus 228 ~vi~~~~~h~s-~~ka~~~~G~-----------~v~~v~~~~-~~-------------~~d~~~Le~~i~---~~t~~vv 278 (541)
+||.-..+|.. ...+....|- .+..+|... .+ .-+++.++++++ +++.+|+
T Consensus 177 ~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI 256 (464)
T TIGR00699 177 SILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAII 256 (464)
T ss_pred EEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 67776665544 3333333321 122233221 00 014566778775 3578889
Q ss_pred eecCCCCCccccC----HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCC--CCCCCCcCCCCceEEEeCCCCCCCCCC
Q 009181 279 GSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGY--PIPPFDFSVQGVTSISVDVHKYGLAPK 352 (541)
Q Consensus 279 ~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~--~~p~~~~~~~gvdsis~~~hK~~~~p~ 352 (541)
+.......|.+.+ +++|.++|++||++|++|+++.||-. .|. ....+++. ...|.++++ |.+.+
T Consensus 257 ~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGr-----tG~~fa~e~~gv~-~~PDi~t~g--K~lg~-- 326 (464)
T TIGR00699 257 VEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGA-----TGKFWAHEHWNLD-DPPDMVTFS--KKFQT-- 326 (464)
T ss_pred EeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCC-----CcchhHHHhcCCC-CCCCEEEeh--hhhcc--
Confidence 8888887888877 99999999999999999999877632 111 00011111 124776664 76311
Q ss_pred CceEEEEecccccccccccccccCCCccCCCcccCCCCCchH---HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhc
Q 009181 353 GTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLI---AGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKE 429 (541)
Q Consensus 353 g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~---a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 429 (541)
.|++ +..+.+.. + .+...++.+++.. ++..++++.+..+ +..++..++.++|.+.|++
T Consensus 327 -gG~~-~~~~~~~~--------~------~~~~~~~T~~gnp~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~ 387 (464)
T TIGR00699 327 -AGYF-FHDPAFRP--------N------KPYRQFNTWMGDPSRALILREIIQEIKRK---DLLENVAHVGDYLYTGLED 387 (464)
T ss_pred -CCcc-ccchhccC--------C------CCcccccCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence 1322 22211100 0 0111222222222 2334444444333 4556666666777777765
Q ss_pred C----CC-eEEe-cCCCeeEEEEecCCC-CHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHH
Q 009181 430 I----PE-LFII-GRPDMTIVAFGSDVV-DIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESV 499 (541)
Q Consensus 430 ~----~~-~~v~-~~~~~~~v~f~~~~~-~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~ 499 (541)
+ |. +.-+ +.....++.+.+.+. ....+.+.+.++|..+...+ .+.+|++++...+ +|+|+++++|.+++
T Consensus 388 l~~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~~~g-~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 388 LQKKYPEFIQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNNGVNIGGCG-VKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred HHHhCCCceeeecccCeEEEEEEecCCHHHHHHHHHHHHHCCcEEecCC-CCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 3 31 2222 124567777776432 25678889999998876553 3689999887666 99999999998763
No 368
>PRK07046 aminotransferase; Validated
Probab=99.41 E-value=1.9e-10 Score=121.88 Aligned_cols=292 Identities=15% Similarity=0.146 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchH-HHHHhh---
Q 009181 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY-DKAAQY--- 245 (541)
Q Consensus 170 ~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~-~ka~~~--- 245 (541)
.+.+.++.+.++++++.+ . + .|+++||||+..|++.+|.+. | +++|+.-+.+|..+ +.....
T Consensus 114 ~~~~~~lAe~l~~~~~~~--~----v--~F~nSGtEA~e~AlrlAR~~T----G--r~~ii~~~g~YHG~~d~~l~~~~~ 179 (453)
T PRK07046 114 SEDAAWVGEELARRFGLP--Y----W--QVATTATDANRFVLRWARAVT----G--RPKILVFNGCYHGTVDDVFVDLVD 179 (453)
T ss_pred CHHHHHHHHHHHHHhCCC--E----E--EEECCHHHHHHHHHHHHHHhh----C--CCEEEEECCCCCCCcHHhHhhccC
Confidence 355667888888887532 2 4 899999999999999999753 2 36677655544443 211110
Q ss_pred ---------cCC------eEEEeeCCCCCccCHHHHHHhhc-cCceEEEeecCCCCCccccC----HHHHHHHHHHcCCE
Q 009181 246 ---------FNI------KLWRVPVDKEFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTC 305 (541)
Q Consensus 246 ---------~G~------~v~~v~~~~~~~~d~~~Le~~i~-~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~ 305 (541)
.|+ .+..+|.+ |++++++.+. ++..+|++.......|.+.| ++++.++|++||+.
T Consensus 180 ~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~l 254 (453)
T PRK07046 180 GRPVQRPGLLGQVHDLTATTRVVEFN-----DLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTL 254 (453)
T ss_pred CCCCCCCCCCCCCccccCceEeeCCC-----CHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCE
Confidence 011 12223322 8899999885 46788888888777787765 89999999999999
Q ss_pred EEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCC
Q 009181 306 LHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSP 383 (541)
Q Consensus 306 lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (541)
+++|+++. |-. ..|- . . ...| .|.+++ -|.+.++..+|+++.+++ +.............+ .
T Consensus 255 lI~DEV~t-fr~----g~Gg-~--~--~~~gv~PDi~t~--gK~lggG~Pi~av~g~~~-i~~~~~~~~~~~~~~----~ 317 (453)
T PRK07046 255 LVIDETHT-ISS----GPGG-Y--T--RAHGLEPDFLVV--GKPIAGGVPCAVYGFSAE-LAERAQAAKASAPPG----H 317 (453)
T ss_pred EEEEcccc-Ccc----CCcc-h--h--HHhCCCccceee--hhhhcCCCcceeeeehHH-HHHHHhhccccCCCC----C
Confidence 99999974 111 0110 0 0 1112 277765 488666677887776544 322110000000000 0
Q ss_pred cccCCCCCch---HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhc----CC-CeEEecCCCeeEEEEecCCC----
Q 009181 384 TVAGSRPGGL---IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKE----IP-ELFIIGRPDMTIVAFGSDVV---- 451 (541)
Q Consensus 384 ~~~gsr~~~~---~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~-~~~v~~~~~~~~v~f~~~~~---- 451 (541)
...++.+++. .++..++++.+.. .+..++..++.++|++.|++ .+ -..+.+......+.|.....
T Consensus 318 ~~~~~T~~gnpl~~aa~~a~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~ 394 (453)
T PRK07046 318 SGIGTTLSANALAMAAMRATLAEVMT---EAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGA 394 (453)
T ss_pred ceeCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHH
Confidence 1112222222 2344444444432 23566666777777777764 22 12333333332333322111
Q ss_pred ------C---HHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 452 ------D---IFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 452 ------~---~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
+ ...+...|.++|+.+...+ +.++++.+ .+.+|+|++++.++++++++.
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~--~~~~~~p~-~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 395 EAAAALDPELEAALHLYLLNRGVLITPFH--NMMLVCPA-TTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred HHhcccCHHHHHHHHHHHHHCCCEEeccc--CcEEEeCC-CCHHHHHHHHHHHHHHHHHHh
Confidence 1 1345667888998776432 45778765 455999999999999998764
No 369
>PRK06149 hypothetical protein; Provisional
Probab=99.40 E-value=1.4e-10 Score=133.80 Aligned_cols=296 Identities=18% Similarity=0.135 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHH-HHHhhcC---
Q 009181 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD-KAAQYFN--- 247 (541)
Q Consensus 172 ~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~-ka~~~~G--- 247 (541)
...++.+.+++++..+.+. + .|+++||||+..|++.+|.+. | +++|+....+|.... .+....+
T Consensus 625 ~~~elae~L~~~~p~~~~~----v--~f~~SGsEA~e~AlklAr~~t----g--r~~ii~~~~~yHG~t~ga~~~s~~~~ 692 (972)
T PRK06149 625 AVAEFSERLAALAPDGLDT----V--FLVNSGSEANDLAIRLAWAAS----G--RRDVVSVLEAYHGWTVATDAVSTSIA 692 (972)
T ss_pred HHHHHHHHHHHhCCCCcCE----E--EEeCCchHHHHHHHHHHHHhc----C--CCeEEEEeCCCCCcChhHhhhcCCcc
Confidence 4455666788877432222 4 899999999999999998753 2 245666555444322 2111110
Q ss_pred -------C---eEEEeeCCCCCc-----cC-----HHHHHHhhc------cCceEEEeecCCCCCccccC----HHHHHH
Q 009181 248 -------I---KLWRVPVDKEFR-----AD-----VKAIKKYIN------RNTVLIVGSAPGFPHGIIDP----IQELGE 297 (541)
Q Consensus 248 -------~---~v~~v~~~~~~~-----~d-----~~~Le~~i~------~~t~~vv~~~~~~~~G~id~----i~~I~~ 297 (541)
. .+..++....++ .+ .+++++.++ +++.+|++.......|.+.+ +++|.+
T Consensus 693 ~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~ 772 (972)
T PRK06149 693 DNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYA 772 (972)
T ss_pred ccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHH
Confidence 0 133344332211 11 244444442 35778888887777888877 999999
Q ss_pred HHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEeccccccccccccccc
Q 009181 298 LALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEW 375 (541)
Q Consensus 298 la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~ 375 (541)
+|++||+++++|+++.||-. .|.. -+.+...| .|+++++ |.+.++..+|+++.+++ +..... ..
T Consensus 773 lc~~~g~llI~DEV~tGfGR-----tG~~--~~a~e~~gv~PDivt~g--K~lg~G~Pl~av~~~~~-i~~~~~--~~-- 838 (972)
T PRK06149 773 AVRARGGVCIADEVQVGYGR-----LGHY--FWGFEQQGVVPDIITMA--KGMGNGHPLGAVITRRE-IAEALE--AE-- 838 (972)
T ss_pred HHHHcCCEEEEEeehhcCCc-----cCcc--chhhhhcCCCCCEEEec--ccccCCeeeEEEEEcHH-HHhhhc--cC--
Confidence 99999999999999966632 2210 01122234 3888764 87666566888777654 322110 00
Q ss_pred CCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecC--CCeeEEEEecC-C-
Q 009181 376 SGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGR--PDMTIVAFGSD-V- 450 (541)
Q Consensus 376 ~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~f~~~-~- 450 (541)
+.+ ++..++...++.+++..+..-.-++..++..++.++|++.|+++ ....+++. ..+.++.+.+. +
T Consensus 839 --~~~------~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~ 910 (972)
T PRK06149 839 --GYF------FSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDR 910 (972)
T ss_pred --Ccc------cCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCc
Confidence 100 01112222344444433322222356677777778888888764 11122221 12333444331 1
Q ss_pred ----C---CHHHHHHHHHhCCceeccCCC-CCeEEEEecCCCH-HHHHHHHHHHHHHHHH
Q 009181 451 ----V---DIFEVNDIMSSKGWHLNPLQR-PNSIHICVTLQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 451 ----~---~~~~l~~~l~~~G~~~~~~~~-~~~iRi~~~~~~~-e~id~~i~~L~~~~~~ 501 (541)
. ....+.+.|.++|+.+...+. ++.+|+..+...+ +++|++++.|++++++
T Consensus 911 ~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 911 QTLEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred ccCCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 1 145788899999988765543 3689998876555 9999999999999864
No 370
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.40 E-value=5.5e-10 Score=109.95 Aligned_cols=318 Identities=15% Similarity=0.165 Sum_probs=197.6
Q ss_pred CCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch
Q 009181 159 NPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (541)
Q Consensus 159 n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s 238 (541)
....|..++|+.-+.+.+.+.+.+.=|.|.+. ++| .+|+|++.|+...+..+... + ++.|++|-+-||-
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p--~dI--~LT~GAS~ai~~il~l~~~~--~-----~~GvliPiPQYPL 173 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDGIPADP--EDI--FLTTGASPAIRSILSLLIAG--K-----KTGVLIPIPQYPL 173 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccCCCCCH--HHe--eecCCCcHHHHHHHHHHhcC--C-----CCceEeecCCCch
Confidence 44557788888888888888888877754211 136 89999999999999887631 2 2669999999999
Q ss_pred HHHHHhhcCCeEEEeeCCC--CCccCHHHHHHhhcc-----CceEEEeecCCCCCcccc---CHHHHHHHHHHcCCEEEE
Q 009181 239 YDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINR-----NTVLIVGSAPGFPHGIID---PIQELGELALSHGTCLHV 308 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~-----~t~~vv~~~~~~~~G~id---~i~~I~~la~~~~i~lhv 308 (541)
+...+..+|...+..-.|+ +|.+|.++|++.+++ +++++++.+|.||||.+. +|++|...|+++++.|+.
T Consensus 174 YsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~lla 253 (475)
T KOG0258|consen 174 YSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLA 253 (475)
T ss_pred hHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEec
Confidence 9999999998877777765 899999999999875 588999999999999884 589999999999999999
Q ss_pred eCCcccchhh-------h---hhhcCCCCCCCCcCCCCceEEEe-CCCCC--CCCCCCceEEEEec--ccccccccc---
Q 009181 309 DLCLGGFVLP-------F---AKKLGYPIPPFDFSVQGVTSISV-DVHKY--GLAPKGTSVVLYRN--REIRKHQFV--- 370 (541)
Q Consensus 309 D~a~gg~~~~-------f---~~~~g~~~p~~~~~~~gvdsis~-~~hK~--~~~p~g~g~ll~~~--~~~~~~~~~--- 370 (541)
|++|--.+.. | +..+|. ++. ..+..+++ +.||. |=++...|.+=+-+ ++..+..+.
T Consensus 254 DEVYQ~Nvy~~~skFhSfKKvl~emg~---~~~---~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~s 327 (475)
T KOG0258|consen 254 DEVYQDNVYTTGSKFHSFKKVLHEMGN---PYP---DNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLAS 327 (475)
T ss_pred hHHHHhhccCCCcchHhHHHHHHHhcC---ccC---CceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHh
Confidence 9998544331 1 112221 111 23444444 34443 22333355443322 222221110
Q ss_pred --cccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEec
Q 009181 371 --AVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGS 448 (541)
Q Consensus 371 --~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~ 448 (541)
..+.-.|-........-..+|-.-..+|.+ .-..+.+.....++.+.+.++.++|++.- ++.+.+..|.-
T Consensus 328 i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~-------Ekd~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGAMY~fP~ 399 (475)
T KOG0258|consen 328 IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSS-------EKDGILSSLRSRAKLTEDAFNSLEGISCN-PVQGAMYLFPQ 399 (475)
T ss_pred hhhcCCccchhhhceecCCCCCCCcchhhhhh-------hhHhHHHHHHHHhHHHHHHHhhcCceeec-cCccceeeccc
Confidence 001111100000000111122222233332 23456777788889999999999998855 66777777753
Q ss_pred CCC---------------CHHHHHHHHHhCCceec-cC---CCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 449 DVV---------------DIFEVNDIMSSKGWHLN-PL---QRPNSIHICVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 449 ~~~---------------~~~~l~~~l~~~G~~~~-~~---~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
-.. |..---+.|...|+.+. .. |.++.-|+-.|..... + ..++++++.-++++
T Consensus 400 i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~-~-~~i~~~~~fH~~f~ 471 (475)
T KOG0258|consen 400 ISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG-L-EIIEKFKKFHAEFM 471 (475)
T ss_pred ccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch-h-HHHHHHHHHHHHHH
Confidence 222 11112245566786543 22 3357777766655443 3 56666666655554
No 371
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.40 E-value=8.5e-12 Score=116.23 Aligned_cols=271 Identities=19% Similarity=0.173 Sum_probs=178.7
Q ss_pred ccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc-
Q 009181 194 QVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR- 272 (541)
Q Consensus 194 ~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~- 272 (541)
++ .+..|+.|.+...+++... +| +++|+...+++..+.-.+...+++++.+|.+++|.+|++++.+.++.
T Consensus 88 ni--c~GvGsDE~ID~iiR~~c~-----PG--keKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~d 158 (375)
T KOG0633|consen 88 NI--CVGVGSDELIDLIIRCVCD-----PG--KEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELD 158 (375)
T ss_pred ce--EEecCcHHHHHHHHhheec-----CC--ccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhcc
Confidence 37 7899999999999999876 66 46788888888887777888899999999999999999999998864
Q ss_pred -CceEEEeecCCCCCccccCHHHHHHHHHHc-CCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCC-CC
Q 009181 273 -NTVLIVGSAPGFPHGIIDPIQELGELALSH-GTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKY-GL 349 (541)
Q Consensus 273 -~t~~vv~~~~~~~~G~id~i~~I~~la~~~-~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~-~~ 349 (541)
.++++++++|+||+|.+-..+.|.++.+.- |..++||+||-.|.- .+... ++--..+.. .+.-+..|. |.
T Consensus 159 s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg-----~~S~~-~lV~kYpNL-ivlqTlSKsfGL 231 (375)
T KOG0633|consen 159 SKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSG-----VESRM-KLVKKYPNL-IVLQTLSKSFGL 231 (375)
T ss_pred ccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeecc-----ccccc-hHhHhCCce-eehhhhhhhcCc
Confidence 589999999999999998877777777654 789999999844321 00000 010011111 112234455 34
Q ss_pred CCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHH
Q 009181 350 APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL---GQEGYLENTKAIMEVSESIQKG 426 (541)
Q Consensus 350 ~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l---g~~g~~~~~~~~~~~a~~l~~~ 426 (541)
++...|+-++ ...+.........+|.-+ .++--+|+.++ ..+.++...+.+.+.+.+|.+.
T Consensus 232 AGiRvG~~~~-~~~ia~iln~~KaPYNiS---------------~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~ke 295 (375)
T KOG0633|consen 232 AGIRVGYGAF-PLSIAEILNRAKAPYNIS---------------VAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKE 295 (375)
T ss_pred ceeEeecccc-cHHHHHHHHhccCCcccc---------------chhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHH
Confidence 4444664333 233322221111222111 12333344444 3455777788888888999999
Q ss_pred hhcCCCeE-EecCCCeeEEEEecCCCC----HHHHHHHHHhCCceecc----CCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 009181 427 IKEIPELF-IIGRPDMTIVAFGSDVVD----IFEVNDIMSSKGWHLNP----LQRPNSIHICVTLQHVAVVDVFLRDLRE 497 (541)
Q Consensus 427 L~~~~~~~-v~~~~~~~~v~f~~~~~~----~~~l~~~l~~~G~~~~~----~~~~~~iRi~~~~~~~e~id~~i~~L~~ 497 (541)
|.++|++. ..+..+.+++..+..+.+ .+...+.+.+.|.++.- .+..+++|++++- .|+-+.+++.+++
T Consensus 296 Lt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt--~EentvL~k~~K~ 373 (375)
T KOG0633|consen 296 LTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGT--PEENTVLMKCLKQ 373 (375)
T ss_pred hhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCC--cccchHHHHHHHh
Confidence 99988765 345556777777776442 33445666677876543 3345899999873 3566677777765
Q ss_pred H
Q 009181 498 S 498 (541)
Q Consensus 498 ~ 498 (541)
.
T Consensus 374 ~ 374 (375)
T KOG0633|consen 374 F 374 (375)
T ss_pred h
Confidence 4
No 372
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.39 E-value=5.2e-11 Score=113.44 Aligned_cols=304 Identities=17% Similarity=0.167 Sum_probs=209.8
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecC----CccchHHHHHhhcCCe-
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPV----SAHSAYDKAAQYFNIK- 249 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~----~~h~s~~ka~~~~G~~- 249 (541)
-+...++.+.|+.+.+ + .+.++=|.-+...+.++-. +--++-+|+... ..|++++..+++-|+.
T Consensus 115 ~il~l~~~iVGA~e~E----v--avmNsLTvNlh~Ll~sFyK-----PTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~ 183 (465)
T KOG3846|consen 115 PILPLLAPIVGAQENE----V--AVMNSLTVNLHSLLISFYK-----PTEKRFKILLEKKAFPSDHYAIESQCKLHGISP 183 (465)
T ss_pred hhhhhhhhhccCCchh----h--hhHhhhhhHHHHHHHHhcC-----CcchhhhhhhccCCCCchHHHHHhhhhhcCCCh
Confidence 3667888999998876 4 4444444444444444432 111123455543 3477789999999984
Q ss_pred ---EEEeeCCC-CCccCHHHHHHhhccC---ceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 250 ---LWRVPVDK-EFRADVKAIKKYINRN---TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 250 ---v~~v~~~~-~~~~d~~~Le~~i~~~---t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
.+.+...+ .-.+..+++-..|+++ ..+|+++..++-||...|+.+|.+.-+..|+.+-.|-|++-.-
T Consensus 184 e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgN------ 257 (465)
T KOG3846|consen 184 ENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGN------ 257 (465)
T ss_pred HHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcC------
Confidence 34444433 4467888888888764 6788999999999999999999988888899999999865332
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCC-ceEEEEecccccccccccccccCCCcc-----------CCCcccCCCC
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKG-TSVVLYRNREIRKHQFVAVTEWSGGLY-----------VSPTVAGSRP 390 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g-~g~ll~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~gsr~ 390 (541)
+ ++....+|||+.++-.+||++++.| +|.+++.++ ..+.+......|.|... ..|..+|-|.
T Consensus 258 ----V-pL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHek-h~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRi 331 (465)
T KOG3846|consen 258 ----V-PLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEK-HTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRI 331 (465)
T ss_pred ----C-ceEEeecCCceEEEeeecccccCCCccceeeeehh-hhcchhhHHhhhccCCcchhhhhccccccCcccccccc
Confidence 3 3556789999999999999987665 566555443 33334444455554332 2233445443
Q ss_pred C----chHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCC-----------eEEecCCC----eeEEEEecCCC
Q 009181 391 G----GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPE-----------LFIIGRPD----MTIVAFGSDVV 451 (541)
Q Consensus 391 ~----~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~-----------~~v~~~~~----~~~v~f~~~~~ 451 (541)
. ..++++..+++.+.+-.+.+..++..-++.|+...++...| +.++.|.. +..+++.+..
T Consensus 332 SNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss- 410 (465)
T KOG3846|consen 332 SNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS- 410 (465)
T ss_pred CCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC-
Confidence 2 23567888888888888899999999999999888876533 44454422 3444444432
Q ss_pred CHHHHHHHHHhCCceeccCCCCCeEEEEe-cCCCH-HHHHHHHHHHHHHHHHHH
Q 009181 452 DIFEVNDIMSSKGWHLNPLQRPNSIHICV-TLQHV-AVVDVFLRDLRESVETVK 503 (541)
Q Consensus 452 ~~~~l~~~l~~~G~~~~~~~~~~~iRi~~-~~~~~-e~id~~i~~L~~~~~~l~ 503 (541)
+...+.+.|.++|..... ..|+.+|++. +.+|+ .|+.++++.|.++...+.
T Consensus 411 p~~~vfqeL~krGv~~Dk-R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 411 PTPKVFQELHKRGVIGDK-RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred CchHHHHHHHHcCeeccc-cCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 346888999999987664 4688999976 66787 999999999999987654
No 373
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.38 E-value=4.2e-10 Score=111.56 Aligned_cols=301 Identities=12% Similarity=0.115 Sum_probs=165.6
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcC-------CCCCeEEecCCccchHHHHHhhcC
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG-------ITRPEMIIPVSAHSAYDKAAQYFN 247 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~G-------i~~~~vi~~~~~h~s~~ka~~~~G 247 (541)
|+++.+++++|.++++ + ++..++|-.++.-+.+. .+.....| ..+-+.++|.+.|--....++.+|
T Consensus 73 e~r~l~a~llgv~~~~----v--iv~gNSSL~lM~d~i~~-a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~G 145 (425)
T PF12897_consen 73 EARELFAELLGVPPEN----V--IVGGNSSLNLMHDTISR-AMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFG 145 (425)
T ss_dssp HHHHHHHHHHTS-GGG----E--EE-SS-HHHHHHHHHHH-HHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT
T ss_pred HHHHHHHHHhCCCHHH----E--EEeccchHHHHHHHHHH-HHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhC
Confidence 5667999999999987 4 44444444444333322 22211111 113468999999999999999999
Q ss_pred CeEEEeeCCCCCccCHHHHHHhhccCc--e-EEEeecCCCCCccccCHHHHHHHH----HHcCCEEEEeCCcccchhhhh
Q 009181 248 IKLWRVPVDKEFRADVKAIKKYINRNT--V-LIVGSAPGFPHGIIDPIQELGELA----LSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 248 ~~v~~v~~~~~~~~d~~~Le~~i~~~t--~-~vv~~~~~~~~G~id~i~~I~~la----~~~~i~lhvD~a~gg~~~~f~ 320 (541)
++.+.||++++| .|++.+|+++.+++ + +.++.--+||+|.+..=+-+..+| ...+..+.-|.||+-..+-
T Consensus 146 iemi~VpM~~dG-PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~-- 222 (425)
T PF12897_consen 146 IEMIPVPMTEDG-PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLY-- 222 (425)
T ss_dssp -EEEEEEEETTE-E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSS--
T ss_pred cEEEecCCCCCC-CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeecc--
Confidence 999999999887 79999999996553 3 556667789999998766555555 3468999999999755430
Q ss_pred hhcCCCCCCCCc-------CCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCch
Q 009181 321 KKLGYPIPPFDF-------SVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGL 393 (541)
Q Consensus 321 ~~~g~~~p~~~~-------~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~ 393 (541)
..... ....+. ..++--....|+.|.-|++.|++++......+....-.... ...|.-
T Consensus 223 ~~~~~-~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~--------------~tIgpd 287 (425)
T PF12897_consen 223 DEEPR-DALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSV--------------QTIGPD 287 (425)
T ss_dssp SSSS-------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHH--------------H-S---
T ss_pred ccccc-hhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcC--------------ceeCcc
Confidence 00000 000111 11223566778899999999999866655433211100000 000100
Q ss_pred HHHHHHHHHHHh-HH-HHHHHHHHHHHH--------HHHHHHHhh-cCCCeEEecCCC-eeEEEEecCCCCHHHHHHHHH
Q 009181 394 IAGAWAALMSLG-QE-GYLENTKAIMEV--------SESIQKGIK-EIPELFIIGRPD-MTIVAFGSDVVDIFEVNDIMS 461 (541)
Q Consensus 394 ~a~~~~al~~lg-~~-g~~~~~~~~~~~--------a~~l~~~L~-~~~~~~v~~~~~-~~~v~f~~~~~~~~~l~~~l~ 461 (541)
=..+..-.++++ .+ |++++.++..+. -+.|.+.|. .. ++--+..|. +.+|+|...+....++.+..+
T Consensus 288 KvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GGYFIsld~~~G~AkrvV~lak 366 (425)
T PF12897_consen 288 KVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGGYFISLDVLDGTAKRVVELAK 366 (425)
T ss_dssp HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBSS-EEEEESTT-HHHHHHHHH
T ss_pred HHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCceEEEEecCCChHHHHHHHHH
Confidence 113444444553 34 666666555543 345556665 33 444455554 678899988888999999999
Q ss_pred hCCceeccCC-------C--CCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 462 SKGWHLNPLQ-------R--PNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 462 ~~G~~~~~~~-------~--~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
+.|+.++.-+ . ...||++.+..+.+|++..++.+.-+++-
T Consensus 367 eAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~l 415 (425)
T PF12897_consen 367 EAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVKL 415 (425)
T ss_dssp HTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHHH
T ss_pred HhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 9998876421 1 26899999987779999999998888754
No 374
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.36 E-value=1.1e-10 Score=115.48 Aligned_cols=339 Identities=14% Similarity=0.178 Sum_probs=210.2
Q ss_pred eeecCCCCcccHHHHHHHHHHhhcccC-CCCcccchHHHHHHHHHHHHHHH-HhCCCCCC-CCCccceEEcCcHHHHHHH
Q 009181 133 TVYIGGSEAEGHFSLINEACSMFAHTN-PLHLDIFQSVARFEAEVIAMTAA-LLGNKEKA-SGGQVCGNMTSGGTESILL 209 (541)
Q Consensus 133 ~~y~~~~~~~~~~~~~~~~~~~~~~~n-~~~~~~~~~~~~~e~ev~~~la~-l~g~~~~~-~~~~v~G~~t~Ggt~a~~~ 209 (541)
++|-....-.+....+.++-.....+. .-.|-.-.|...+.+ .+.+ +||.+..- ..+++.++-|.|||.|+..
T Consensus 34 GvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~----~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~ 109 (396)
T COG1448 34 GVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLE----AVQKLLFGADSPALAEDRVATVQTLGGTGALRV 109 (396)
T ss_pred eeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHH----HHHHHhcCCCcHHHHhhhHhheecCCcchHHHH
Confidence 344443332224455555544433332 122322334443333 3444 46644111 1123666889999999999
Q ss_pred HHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCC-C-CCccCHHHHHHhhc---cCceEEEeecCCC
Q 009181 210 AVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD-K-EFRADVKAIKKYIN---RNTVLIVGSAPGF 284 (541)
Q Consensus 210 al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~-~-~~~~d~~~Le~~i~---~~t~~vv~~~~~~ 284 (541)
+..-+...... ..|.+|+++++......+..|+++...|.- . +..+|.+.|...++ ++.+++.-...+|
T Consensus 110 ~A~fl~~~~~~------~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHN 183 (396)
T COG1448 110 AADFLARFFPD------ATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHN 183 (396)
T ss_pred HHHHHHHhCCC------ceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCC
Confidence 88877643211 469999999999999999999999999984 3 56699999988776 4677888888899
Q ss_pred CCccccC---HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCC-cCCCCc-eEEEeCCCCCCCCCCC--ceEE
Q 009181 285 PHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD-FSVQGV-TSISVDVHKYGLAPKG--TSVV 357 (541)
Q Consensus 285 ~~G~id~---i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~-~~~~gv-dsis~~~hK~~~~p~g--~g~l 357 (541)
|||.-.+ .++|.++.++.++.-++|-||-||.--.-+.. + .++ +...+. -.++.|+.|. ++-+| +|++
T Consensus 184 PTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa-~---~lR~~a~~~~~~lva~S~SKn-fgLYgERVGa~ 258 (396)
T COG1448 184 PTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDA-Y---ALRLFAEVGPELLVASSFSKN-FGLYGERVGAL 258 (396)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHH-H---HHHHHHHhCCcEEEEehhhhh-hhhhhhcccee
Confidence 9997544 67899999999999999999987753100000 0 000 011122 5667788998 66665 5544
Q ss_pred EEe--cccccccccccccccCCCccCCCcccCCCCCchHHHHHH---HHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-C
Q 009181 358 LYR--NREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA---ALMSLGQEGYLENTKAIMEVSESIQKGIKEI-P 431 (541)
Q Consensus 358 l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~---al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~ 431 (541)
.+. +.+...........-..+.|.+|.-.|. .+++... .|+..-.+.+..+.+++.++++.|.+.|++. +
T Consensus 259 ~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga----~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~ 334 (396)
T COG1448 259 SVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGA----AVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGA 334 (396)
T ss_pred EEEeCCHHHHHHHHHHHHHHHHhccCCCchhhH----HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 443 2222211110000001123334433332 2222221 2333345678889999999999999999983 2
Q ss_pred --CeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 009181 432 --ELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRES 498 (541)
Q Consensus 432 --~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~ 498 (541)
.|..+.. ..+++++. +.+..++.....+.|+.+...+ |+|+...++..++.+++.+.++
T Consensus 335 ~~~f~~i~~-Q~GMFsy~--Gls~~QV~rLree~~IY~v~sG-----Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 335 PRNFDFIIS-QRGMFSYT--GLSPEQVDRLREEFGIYLVASG-----RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred CcccchHhh-cCceeecC--CCCHHHHHHHHHhccEEEecCC-----eeeeccCChhhHHHHHHHHHhh
Confidence 2555533 34554444 6677777777777888777644 9999999999999999988765
No 375
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.32 E-value=4.1e-10 Score=119.02 Aligned_cols=292 Identities=17% Similarity=0.165 Sum_probs=161.0
Q ss_pred HHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHh---hcCCC---CCeEEecCCccch-HHHHHhhcC
Q 009181 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRN---KRGIT---RPEMIIPVSAHSA-YDKAAQYFN 247 (541)
Q Consensus 175 ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~---~~Gi~---~~~vi~~~~~h~s-~~ka~~~~G 247 (541)
++.+.++++.+.+.-+ .+ .++++||||+..|++.+|.+..+ .+|.. +.+|+.-..+|.. ..-+....|
T Consensus 89 ~l~~~l~~~~~~~~~~---~v--~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~ 163 (431)
T TIGR03251 89 RFVDTFARVLGDPALP---HL--FFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTN 163 (431)
T ss_pred HHHHHHHHhcCCCCcC---EE--EEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccC
Confidence 3444566654222112 24 89999999999999999976422 12321 2567766655444 333333322
Q ss_pred Ce-EE----------EeeC-------CCCC--------ccCHHHHHHhhc---cCceEEEeecCCCCCcccc----CHHH
Q 009181 248 IK-LW----------RVPV-------DKEF--------RADVKAIKKYIN---RNTVLIVGSAPGFPHGIID----PIQE 294 (541)
Q Consensus 248 ~~-v~----------~v~~-------~~~~--------~~d~~~Le~~i~---~~t~~vv~~~~~~~~G~id----~i~~ 294 (541)
-. .. .++. +... .-+++++++.+. +++.++++.......|.+. -+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~ 243 (431)
T TIGR03251 164 TDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRA 243 (431)
T ss_pred CccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHH
Confidence 11 00 0111 0000 013455666664 5688999998888788764 3899
Q ss_pred HHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCC--ceEEEeCCCCCCCCCCCceEEEEecc--cccccccc
Q 009181 295 LGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNR--EIRKHQFV 370 (541)
Q Consensus 295 I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~g--vdsis~~~hK~~~~p~g~g~ll~~~~--~~~~~~~~ 370 (541)
|.++|++||+.|++|+++.|+-.. |. .+.+...| .|.++++ |.. +.+|+ +.+++ +.....+
T Consensus 244 l~~lc~~~g~llI~DEV~tG~Grt-----G~---~~a~~~~gv~PDi~~~g--K~~---~~~g~-~~~~~i~~~~~~~~- 308 (431)
T TIGR03251 244 MRALCDEHDALLIFDEVQTGVGLT-----GT---AWAYQQLGVQPDIVAFG--KKT---QVCGI-MAGRRVDEVADNVF- 308 (431)
T ss_pred HHHHHHHcCCEEEEecchhccCcc-----ch---HHHHHhcCCCCCEEEec--ccC---ccceE-EecchHHHhhhhcc-
Confidence 999999999999999999876431 11 01111122 4787764 552 23443 44432 1110000
Q ss_pred cccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhc----CCCeEEecCCCeeEEEE
Q 009181 371 AVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKE----IPELFIIGRPDMTIVAF 446 (541)
Q Consensus 371 ~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~f 446 (541)
.|... ...+..|.. ...++..++++.+..++ ..++..++.+++.+.|++ .+++..-......++.+
T Consensus 309 ---~~~~~--~~~T~~gnp--l~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i 378 (431)
T TIGR03251 309 ---AVPSR--LNSTWGGNL--VDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAF 378 (431)
T ss_pred ---cCccc--cCCCCCCCH--HHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEE
Confidence 01111 011111221 11334455555554443 344555566666666554 33222111223456666
Q ss_pred ecCCC-CHHHHHHHHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHH
Q 009181 447 GSDVV-DIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRE 497 (541)
Q Consensus 447 ~~~~~-~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~ 497 (541)
.+.+. ...++.+.|.++|+.+...+ .+.+|++++..++ +|+|++++.|.+
T Consensus 379 ~~~~~~~~~~~~~~l~~~Gvl~~~~g-~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 379 DLPSTADRDEVIRQLYREGVLLLGCG-ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred EeCCHHHHHHHHHHHHhCCeEEecCC-CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 66443 24578889999998775433 3579999988776 999999999876
No 376
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.30 E-value=8.7e-10 Score=123.26 Aligned_cols=215 Identities=13% Similarity=0.076 Sum_probs=125.2
Q ss_pred HHHHHhhc--------cCceEEEeecC-CCCCccccC----HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCC
Q 009181 264 KAIKKYIN--------RNTVLIVGSAP-GFPHGIIDP----IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (541)
Q Consensus 264 ~~Le~~i~--------~~t~~vv~~~~-~~~~G~id~----i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~ 330 (541)
+.+++.|+ ++..+|++... ...-|.+.+ +++|.++|++||++||.|+++.||.. .|. .+
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGR-----tG~---~f 638 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWR-----LGV---ES 638 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCc-----ccc---hh
Confidence 55666664 24677777774 455577754 88999999999999999999988843 232 23
Q ss_pred CcCCCCc--eEEEeCCCCCCCCC-CCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHH---H
Q 009181 331 DFSVQGV--TSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMS---L 404 (541)
Q Consensus 331 ~~~~~gv--dsis~~~hK~~~~p-~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~---l 404 (541)
.+...|| |++++. |.+.++ ...|+++.+++ +.... .+.........|+.+++..+++.+++.. +
T Consensus 639 a~e~~gv~PDIi~~g--KgLtgG~~Plaa~l~~~~-I~~~f-------~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~ 708 (817)
T PLN02974 639 AWELLGCKPDIACYA--KLLTGGLVPLAATLATEE-VFEAF-------RGPSKLDALLHGHSYTAHPMGCAAAAKALQWY 708 (817)
T ss_pred hHHhcCCCCCEEeec--ccccCCCCccEEEEEcHH-HHHhh-------ccccccCCcccCCCCCcCHHHHHHHHHHHHHH
Confidence 3333454 888876 886666 36777777654 22111 0000001122344444444455555444 4
Q ss_pred hHH-HHHHHHHHHHHHHHHHHHHh----hcCCCeEEecCCCeeEEEEecCCC---------CHHHHHHHHH-hCCceecc
Q 009181 405 GQE-GYLENTKAIMEVSESIQKGI----KEIPELFIIGRPDMTIVAFGSDVV---------DIFEVNDIMS-SKGWHLNP 469 (541)
Q Consensus 405 g~~-g~~~~~~~~~~~a~~l~~~L----~~~~~~~v~~~~~~~~v~f~~~~~---------~~~~l~~~l~-~~G~~~~~ 469 (541)
..+ -+.+..++...+.+++.+.| ++.|.+.-+ .....++.+.+.+. -..++.+.+. ++|+.+..
T Consensus 709 ~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~V-Rg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~ 787 (817)
T PLN02974 709 KDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERV-VSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARP 787 (817)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE-EeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEe
Confidence 332 22344445555555555555 334432211 11234444444221 1346777788 89988766
Q ss_pred CCCCCeEEEEecCCCH-HHHHHHHHHHHHHH
Q 009181 470 LQRPNSIHICVTLQHV-AVVDVFLRDLRESV 499 (541)
Q Consensus 470 ~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~ 499 (541)
.+ +.+++..+...+ ++++++++.|.+.+
T Consensus 788 ~G--nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 788 LG--NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred cC--CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 54 578887665555 99999999998765
No 377
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.27 E-value=2e-09 Score=107.10 Aligned_cols=297 Identities=19% Similarity=0.160 Sum_probs=170.9
Q ss_pred HHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCC-ccchHHHHHhhcCCeEEEeeCC
Q 009181 178 AMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVS-AHSAYDKAAQYFNIKLWRVPVD 256 (541)
Q Consensus 178 ~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~-~h~s~~ka~~~~G~~v~~v~~~ 256 (541)
+.+.+..+-+..+ .+ .|.++||||+..|++.+|.....+.+-.+..+|.-.. .|--...++...+..-...|.+
T Consensus 105 ~~l~~~~~~~~~~---rv--ff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~ 179 (433)
T KOG1401|consen 105 EVLSAVLGKGSAE---RV--FFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFD 179 (433)
T ss_pred HHHHhcccCCCcc---EE--EEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCC
Confidence 3455555433332 35 8999999999999999998665544333334555444 4554555555444443344332
Q ss_pred C---C----CccCHHHHHHhhccCc---eEEEeecCCCCCccc--cC--HHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 257 K---E----FRADVKAIKKYINRNT---VLIVGSAPGFPHGII--DP--IQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 257 ~---~----~~~d~~~Le~~i~~~t---~~vv~~~~~~~~G~i--d~--i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
+ + ---|..++++.++.+. .+|++....-.-|.+ +| +..|.++|+++|+.++.|+++.|+..
T Consensus 180 p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR----- 254 (433)
T KOG1401|consen 180 PIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGR----- 254 (433)
T ss_pred CCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccc-----
Confidence 1 1 0137999999998765 788888887666665 33 77999999999999999999987643
Q ss_pred cCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHH
Q 009181 323 LGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (541)
Q Consensus 323 ~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~a 400 (541)
+|. .+.+...|+ |+.++. |.+.++...|+.+++++-... . . ...+..+|+.+++...++-++
T Consensus 255 ~g~---~~a~e~~~~~PDI~t~a--K~L~gGlPigA~~v~~kV~~~-i-------~---~~~~l~hg~Tf~gnpLacsa~ 318 (433)
T KOG1401|consen 255 LGY---GWAQEYFGVTPDITTVA--KPLGGGLPIGATGVRDKVAEM-I-------S---PGDHLYHGGTFSGNPLACSAG 318 (433)
T ss_pred cch---HHHHHHhCcCCcceeeh--hhccCCceeEEEeehHHHHhh-c-------C---CCCccccCcccCCChhhhhHH
Confidence 121 122223333 666654 888777889988887763211 1 1 112244455555555566665
Q ss_pred HHHHh----HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCC-----CCHHHHHHHHHhCCceeccCC
Q 009181 401 LMSLG----QEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDV-----VDIFEVNDIMSSKGWHLNPLQ 471 (541)
Q Consensus 401 l~~lg----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~-----~~~~~l~~~l~~~G~~~~~~~ 471 (541)
...+. .+.++++.+.-..+++.+.+.+.+-+....-+-....++-+.... .+...-...+...++.....
T Consensus 319 ~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~- 397 (433)
T KOG1401|consen 319 IKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLE- 397 (433)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhccccc-
Confidence 54443 334455555555566666666665433222212223333333321 12223333344444332211
Q ss_pred CCCeEEEEe----cCCC-HHHHHHHHHHHHHHHHHHH
Q 009181 472 RPNSIHICV----TLQH-VAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 472 ~~~~iRi~~----~~~~-~e~id~~i~~L~~~~~~l~ 503 (541)
..+|+.. +..+ +|+++++++.+.+.+.++.
T Consensus 398 --~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 398 --EGVRIAPIYLLTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred --ceEEEeccccccccCcHHHHHHHHHHHHHHHHHhc
Confidence 2355543 2222 4889999999999887764
No 378
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.24 E-value=8.3e-10 Score=113.09 Aligned_cols=311 Identities=12% Similarity=0.066 Sum_probs=183.2
Q ss_pred cccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEE-------ecCCc
Q 009181 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMI-------IPVSA 235 (541)
Q Consensus 163 ~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi-------~~~~~ 235 (541)
|..+|.+.++|+ .+++++|.+.. ++|..|+.+...+.++... .+| +++. ++...
T Consensus 70 Y~gdpSv~~Lee----~vael~G~E~a--------lpthqGRgaE~Il~~~~~~----~~g---~e~g~~~~~~~v~hn~ 130 (467)
T TIGR02617 70 YSGSRSYYALAE----SVKNIFGYQYT--------IPTHQGRGAEQIYIPVLIK----KRE---QEKGLDRSKMVAFSNY 130 (467)
T ss_pred cccCchHHHHHH----HHHHHhCCceE--------EECCCCchHHHHHHHhhcc----ccc---ccccccccccccceEE
Confidence 455677777777 88889999842 7888889999999888753 133 3444 34444
Q ss_pred cchH-HHHHhhcCCeEEEeeCC----------CCCccCHHHHHHhhcc----CceEEEeecCCCC-Cccc---cCHHHHH
Q 009181 236 HSAY-DKAAQYFNIKLWRVPVD----------KEFRADVKAIKKYINR----NTVLIVGSAPGFP-HGII---DPIQELG 296 (541)
Q Consensus 236 h~s~-~ka~~~~G~~v~~v~~~----------~~~~~d~~~Le~~i~~----~t~~vv~~~~~~~-~G~i---d~i~~I~ 296 (541)
|+-. ...+.+.|+.++.++.+ ..|.+|+++|+++|++ +..++..+..+|. -|.+ +++.++.
T Consensus 131 ~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~ 210 (467)
T TIGR02617 131 FFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVY 210 (467)
T ss_pred EEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHH
Confidence 5543 34677889988876432 2688999999999984 3333333333333 3555 4578999
Q ss_pred HHHHHcCCEEEEeCCcccchhhhhhh--cCC-CCCCCCc---CCCCceEEEeCCCCCCCCCCCceEEEEecc---ccccc
Q 009181 297 ELALSHGTCLHVDLCLGGFVLPFAKK--LGY-PIPPFDF---SVQGVTSISVDVHKYGLAPKGTSVVLYRNR---EIRKH 367 (541)
Q Consensus 297 ~la~~~~i~lhvD~a~gg~~~~f~~~--~g~-~~p~~~~---~~~gvdsis~~~hK~~~~p~g~g~ll~~~~---~~~~~ 367 (541)
++|++||+++|.|+|--.--.-|.+. .++ ..+.-+. -...+|+++++..|-+++|.|+- +..+++ ++...
T Consensus 211 ~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvGg~-Lag~d~~~~~l~~~ 289 (467)
T TIGR02617 211 EIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMGGL-LCFKDDSFFDVYTE 289 (467)
T ss_pred HHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcccce-EEecchhHHHHHHH
Confidence 99999999999999852100001000 011 0110011 12557999999999988888763 455555 32222
Q ss_pred ccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEe
Q 009181 368 QFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFG 447 (541)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~ 447 (541)
.......+.| ..-.|..+|.-+-++...|. +.--.+.+++.....+||.+.|.+. |+.++. +...-|.+.
T Consensus 290 ~~~~~i~~EG-----f~tYGGlagrd~ea~a~Gl~---e~~~~~yl~~ri~qv~yl~~~L~~~-Gvpi~~-~Gghav~iD 359 (467)
T TIGR02617 290 CRTLCVVQEG-----FPTYGGLEGGAMERLAVGLY---DGMNLDWLAYRINQVQYLVNGLEEI-GVVCQQ-AGGHAAFVD 359 (467)
T ss_pred HHhhcccccC-----CcCcCchhHHHHHHHHhhhh---hcccHHHHHHHHHHHHHHHHHHHhC-CCcEEe-cCccEEEEe
Confidence 1111111111 11112222222222222322 2223567778888889999999986 888876 666655554
Q ss_pred cC---------CCCHHHHHHHHHhC-Cce---eccC-----------CCC--CeEEEEecC--CCHHHHHHHHHHHHHHH
Q 009181 448 SD---------VVDIFEVNDIMSSK-GWH---LNPL-----------QRP--NSIHICVTL--QHVAVVDVFLRDLRESV 499 (541)
Q Consensus 448 ~~---------~~~~~~l~~~l~~~-G~~---~~~~-----------~~~--~~iRi~~~~--~~~e~id~~i~~L~~~~ 499 (541)
.. ......++-+|-.. |+- +.++ ..+ ..+|++++. ++.+.+|..++.+..+.
T Consensus 360 a~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~ 439 (467)
T TIGR02617 360 AGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVK 439 (467)
T ss_pred hhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHH
Confidence 21 12355666555543 321 1111 111 468999875 34489999999998887
Q ss_pred HHHH
Q 009181 500 ETVK 503 (541)
Q Consensus 500 ~~l~ 503 (541)
+.-.
T Consensus 440 ~~~~ 443 (467)
T TIGR02617 440 ENAP 443 (467)
T ss_pred hhhh
Confidence 6533
No 379
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.24 E-value=2.1e-09 Score=113.60 Aligned_cols=288 Identities=12% Similarity=0.071 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEec-CCccchHHHHHh-----
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIP-VSAHSAYDKAAQ----- 244 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~-~~~h~s~~ka~~----- 244 (541)
..+.++.+.+.+++... +. + .|+++||||+..|++.+|.+. | +.+|+.. ...+.++.....
T Consensus 88 ~~~~~la~~l~~~~p~~-~~----v--~f~~sGseA~e~AlklAr~~t----g--r~~i~~~~~~~~h~~~~~~~g~~~~ 154 (431)
T PRK06209 88 AIELDAAESFLELIDGA-DM----V--KFCKNGSDATSAAVRLARAYT----G--RDLVARCADHPFFSTDDWFIGTTPM 154 (431)
T ss_pred HHHHHHHHHHHHhCCcc-ce----E--EEecCHHHHHHHHHHHHHHHh----C--CCeEEEeccCccccccccccccCCC
Confidence 34445677788876421 22 4 899999999999999999753 2 2455543 222211111000
Q ss_pred hcCC------eEEEeeCCCCCccCHHHHHHhhcc---CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccc
Q 009181 245 YFNI------KLWRVPVDKEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 245 ~~G~------~v~~v~~~~~~~~d~~~Le~~i~~---~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~ 315 (541)
..|. .+..++. -|+++++++++. ++.+|++.......+....+++|.++|++||+++++|+++.|+
T Consensus 155 ~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~ 229 (431)
T PRK06209 155 SAGIPASVSALTVTFRY-----NDIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGF 229 (431)
T ss_pred CCCCChhHhccccccCC-----CCHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccC
Confidence 0011 0111222 278999998863 4567776655433233334999999999999999999998776
Q ss_pred hhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccc-cccccccCCCccCCCcccCCCC-C--
Q 009181 316 VLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQ-FVAVTEWSGGLYVSPTVAGSRP-G-- 391 (541)
Q Consensus 316 ~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gsr~-~-- 391 (541)
..- ..|. ...++. ..|.+++ -|.+.++...|+++.++ ++.... +... .. ......++-. +
T Consensus 230 ~~~---~~g~-~~~~gv---~PDi~t~--gK~lggG~p~~av~~~~-~i~~~~~~~~~-~~-----~~~~~~~~T~~~np 293 (431)
T PRK06209 230 RWH---MRGA-QKLYGI---VPDLSCF--GKALGNGFAVSALAGKR-EYMELGGLEHT-DR-----ERVFLLSTTHGAET 293 (431)
T ss_pred CcC---cchh-hHHhCC---Ccceeee--hhhhcCCcccEEEEEHH-HHHhhhccccc-CC-----CCceeeccCCCCCH
Confidence 331 0111 000111 1366554 48765555577666654 333210 0000 00 0011112222 2
Q ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhc----CCCeE--EecCCCe-eEEEEe-cCC-C-C---HHHHHH
Q 009181 392 GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKE----IPELF--IIGRPDM-TIVAFG-SDV-V-D---IFEVND 458 (541)
Q Consensus 392 ~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~--v~~~~~~-~~v~f~-~~~-~-~---~~~l~~ 458 (541)
...++..++++.+..++ ..++..++.+++++.|++ . ++. +-+.... .++.+. ... . . ...+.+
T Consensus 294 ~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~-~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (431)
T PRK06209 294 HALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEH-GLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQ 369 (431)
T ss_pred HHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHH
Confidence 22456666776665443 455666666666666654 3 221 1111111 222211 111 1 1 225677
Q ss_pred HHHhCCceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHHHHHc
Q 009181 459 IMSSKGWHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 459 ~l~~~G~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~~l~~ 504 (541)
.+.++|+.++ .++++ ..++ +|++++++.|+++++++.+
T Consensus 370 ~l~~~Gi~~p------~l~is--~~ht~~dId~~l~~l~~~l~~~~~ 408 (431)
T PRK06209 370 ETIRRGVLMP------SLVVS--YAHGDADIERTIDAVHGALGVYRK 408 (431)
T ss_pred HHHHCCcccc------ccccc--ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 8889998653 24444 3344 9999999999999988743
No 380
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.20 E-value=1e-09 Score=108.37 Aligned_cols=286 Identities=16% Similarity=0.103 Sum_probs=171.7
Q ss_pred HHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC
Q 009181 176 VIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (541)
Q Consensus 176 v~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~ 255 (541)
+.+.+.+++-.+-.. + .|+++|||||.+|++++|.+.... +-|-.....|-....++.+.|+...+-+.
T Consensus 97 ~Ae~L~s~~P~~l~~----v--fF~nsGsEANelal~mar~Yt~~~-----diIa~r~~YHG~t~~t~glt~~~~~k~~~ 165 (442)
T KOG1404|consen 97 LAEALVSKLPGDLKV----V--FFVNSGSEANELALKMARLYTGNL-----DIIARRNSYHGNTLYTLGLTGLSPWKQNF 165 (442)
T ss_pred HHHHHHHhCCCCceE----E--EEecCCchHHHHHHHHHHHhcCCc-----eEEEeeccccCCchhhcccccCCcccccC
Confidence 444666666555443 4 899999999999999999864432 23333444566555566555554333322
Q ss_pred CC-----------C-----CccC-----H----HHHHHhhc----cCceEEEeecCCCCCccccC----HHHHHHHHHHc
Q 009181 256 DK-----------E-----FRAD-----V----KAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELGELALSH 302 (541)
Q Consensus 256 ~~-----------~-----~~~d-----~----~~Le~~i~----~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~ 302 (541)
+. + +.=+ . ++++..|. +...+.++......-|++.+ +++..++|+++
T Consensus 166 ~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~ 245 (442)
T KOG1404|consen 166 PGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKR 245 (442)
T ss_pred CCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHc
Confidence 11 0 0000 1 33344442 23567777877777788876 89999999999
Q ss_pred CCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCcc
Q 009181 303 GTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLY 380 (541)
Q Consensus 303 ~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~ 380 (541)
|..++.|+++.||.. .|. -+.|...|| |++++. |.+..+...|++++.. ++..-......
T Consensus 246 Ggl~IaDEVqtGfGR-----tG~---~wgfe~h~v~PDIvTmA--KgiGnG~Pl~AVvtt~-EIa~v~~~~~~------- 307 (442)
T KOG1404|consen 246 GGLFIADEVQTGFGR-----TGH---MWGFESHGVVPDIVTMA--KGIGNGFPLGAVVTTP-EIADVLNQKSS------- 307 (442)
T ss_pred CCEEEehhhhhcccc-----ccc---cccccccCCCccHHHHH--hhccCCCcceeeecCH-HHHHHHHhccc-------
Confidence 999999999988843 342 344555555 666554 8766667788766654 33321111100
Q ss_pred CCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecCCC--eeEEEEec--CC-----
Q 009181 381 VSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGRPD--MTIVAFGS--DV----- 450 (541)
Q Consensus 381 ~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~~--~~~v~f~~--~~----- 450 (541)
.....++...++.+++..+..-.-+++.++..+...||.+.|.++ ++.+++++.. .-++-+.. +.
T Consensus 308 -----~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~p 382 (442)
T KOG1404|consen 308 -----HFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKP 382 (442)
T ss_pred -----cccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCC
Confidence 001111112244444444544455677888889999999999885 5577777644 22222221 11
Q ss_pred C---CHHHHHHHHHhCCceeccCCC-CCeEEEEecCCCH-HHHHHHHHHH
Q 009181 451 V---DIFEVNDIMSSKGWHLNPLQR-PNSIHICVTLQHV-AVVDVFLRDL 495 (541)
Q Consensus 451 ~---~~~~l~~~l~~~G~~~~~~~~-~~~iRi~~~~~~~-e~id~~i~~L 495 (541)
. ....+.+.+.+.|..+..-+. .+.+||+.+..-| +|+|.+++..
T Consensus 383 p~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 383 PATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred cchHHHHHHHHHHHHhCeeeecccccceEEEecCCeeccHHHHHHHHHHH
Confidence 1 234677888999987743222 3579998876555 9996665544
No 381
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.10 E-value=5e-09 Score=107.24 Aligned_cols=228 Identities=23% Similarity=0.221 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-HHHHHhhc-----
Q 009181 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYF----- 246 (541)
Q Consensus 173 e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-~~ka~~~~----- 246 (541)
..++.+.+.++++..... + .++++|++|+..|++.+|.+......-.+.+|+.-..+|.. ...+....
T Consensus 61 ~~~la~~L~~~~p~~~~~----v--~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~ 134 (339)
T PF00202_consen 61 AAELAEKLAELFPGGLDR----V--FFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPY 134 (339)
T ss_dssp HHHHHHHHHHHSSTTEEE----E--EEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHH
T ss_pred hhhhhhhhhhccccccce----e--eeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccc
Confidence 445677888888443333 5 89999999999999999933221111113677776665543 22222221
Q ss_pred -------CCeEEEeeCCCCCc-----cCHHHHHHhh----ccCceEEEeecCCCCCccccC----HHHHHHHHHHcCCEE
Q 009181 247 -------NIKLWRVPVDKEFR-----ADVKAIKKYI----NRNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCL 306 (541)
Q Consensus 247 -------G~~v~~v~~~~~~~-----~d~~~Le~~i----~~~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~l 306 (541)
.-.+..+|.++... -..+++++.+ .++..+|++.......|.+.+ +++|.++|++||+++
T Consensus 135 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gill 214 (339)
T PF00202_consen 135 RKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILL 214 (339)
T ss_dssp HTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EE
T ss_pred cccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccce
Confidence 12467777763111 0111233222 456788888888877776643 799999999999999
Q ss_pred EEeCCcccchhhhhhhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCc
Q 009181 307 HVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPT 384 (541)
Q Consensus 307 hvD~a~gg~~~~f~~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (541)
++|+++.|+.. .|. .+.+...|+ |+++++ |.+.++...|+++++++-..... +.
T Consensus 215 I~DEV~tG~gR-----tG~---~~a~~~~gv~PDiv~~g--K~l~gG~p~sav~~~~~i~~~~~--------------~~ 270 (339)
T PF00202_consen 215 IADEVQTGFGR-----TGK---FFASEHYGVDPDIVTFG--KGLGGGLPISAVLGSEEIMEAFQ--------------PG 270 (339)
T ss_dssp EEEETTTTTTT-----TSS---SSGHHHHTSSSSEEEEE--GGGGTTSSEEEEEEEHHHHTTSC--------------TT
T ss_pred ecccccccccc-----cCC---ccceecccccCcccccc--cchhhhhhcccccccchhhcccc--------------cc
Confidence 99999988743 221 122222332 888886 88766688888888765322110 00
Q ss_pred ccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 009181 385 VAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEI 430 (541)
Q Consensus 385 ~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (541)
..++..+....++.+++..+..-.-.+..++..++.+++.+.|+++
T Consensus 271 ~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 271 SHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLREL 316 (339)
T ss_dssp SSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 0222222223344444444432222344556666667777666653
No 382
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.09 E-value=1.1e-08 Score=99.98 Aligned_cols=308 Identities=14% Similarity=0.139 Sum_probs=180.1
Q ss_pred cchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCc--HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHH
Q 009181 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSG--GTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (541)
Q Consensus 165 ~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~G--gt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka 242 (541)
.+.+.+.... +.+.+.+.||..-. +-|.- |.|.++. ..++......+| .++++++..|+-...+
T Consensus 74 AYagsrs~~~-L~~avkdifGfq~~--------iPthQGRgAE~Il~--~i~ik~~~~~pg---~~~~~~sN~~FdTTr~ 139 (471)
T COG3033 74 AYAGSRSYYA-LADAVKDIFGFQYT--------IPTHQGRGAENILI--PILIKKGEQEPG---SKMVAFSNYHFDTTRG 139 (471)
T ss_pred hhcccccHHH-HHHHHHHhcCceee--------eeccCCccHHHHHH--HHHhhhccccCC---ccccccccceecchhH
Confidence 3344444444 66688889997532 34444 4444444 333332333455 6788888899886554
Q ss_pred -HhhcCCeEEEeeCCC----------CCccCHHHHHHhhcc----CceEEEeecCCCCCc----cccCHHHHHHHHHHcC
Q 009181 243 -AQYFNIKLWRVPVDK----------EFRADVKAIKKYINR----NTVLIVGSAPGFPHG----IIDPIQELGELALSHG 303 (541)
Q Consensus 243 -~~~~G~~v~~v~~~~----------~~~~d~~~Le~~i~~----~t~~vv~~~~~~~~G----~id~i~~I~~la~~~~ 303 (541)
.+..|..++-+++++ .|.+|++.|++.|++ |...|+.+--+|..| .+.+++++.++|++|+
T Consensus 140 h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ 219 (471)
T COG3033 140 HIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYD 219 (471)
T ss_pred HHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcC
Confidence 566788888887763 356999999999985 444555554444444 3477999999999999
Q ss_pred CEEEEeCCcccchhhhhhhcCC-CCCCCCcCCCC-----------ceEEEeCCCCCCCCCCCceEEEEeccccc---ccc
Q 009181 304 TCLHVDLCLGGFVLPFAKKLGY-PIPPFDFSVQG-----------VTSISVDVHKYGLAPKGTSVVLYRNREIR---KHQ 368 (541)
Q Consensus 304 i~lhvD~a~gg~~~~f~~~~g~-~~p~~~~~~~g-----------vdsis~~~hK~~~~p~g~g~ll~~~~~~~---~~~ 368 (541)
++++.|+|- |.+..-+ ...+-..+.+- .|-+++|..|-+.++.| |++.++++... ...
T Consensus 220 ipvv~Da~R------faENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~fDvy~~~ 292 (471)
T COG3033 220 IPVVMDAAR------FAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSFFDVYEEC 292 (471)
T ss_pred CcEEeehhh------hhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEecCccHHHHHHHH
Confidence 999999994 2221111 00011112222 38899999999888875 56777877421 111
Q ss_pred cccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEec
Q 009181 369 FVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGS 448 (541)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~ 448 (541)
.....-+ .+-++ .|+-.|.-+.++...|..- --.+.+++.....+||.+.|.+. |+.++.|..++-+.+..
T Consensus 293 ~~~~V~~----eG~~t-YGgl~GrdmealAvGL~e~---~~~~yl~~Rv~Qv~YL~~~l~~~-GVpi~~paGGHavfvda 363 (471)
T COG3033 293 RTLVVVQ----EGFPT-YGGLAGRDMEALAVGLREG---VNFDYLAHRVAQVQYLADGLEEA-GVPIVQPAGGHAVFVDA 363 (471)
T ss_pred HhheEee----ccccc-cCcccchhHHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHHhc-CCeeEecCCCceEEeeh
Confidence 0000000 01111 1222222232333333110 01345666777789999999987 99888887777666653
Q ss_pred CC---------CCHHHHHHHHHhC-Cceecc-------------CCCC---CeEEEEecCCC--HHHHHHHHHHHHHHHH
Q 009181 449 DV---------VDIFEVNDIMSSK-GWHLNP-------------LQRP---NSIHICVTLQH--VAVVDVFLRDLRESVE 500 (541)
Q Consensus 449 ~~---------~~~~~l~~~l~~~-G~~~~~-------------~~~~---~~iRi~~~~~~--~e~id~~i~~L~~~~~ 500 (541)
.. ...+.++-.|-+. |+-... .+.+ .-+|++++..+ .+.+|..++.++.+.+
T Consensus 364 ~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e 443 (471)
T COG3033 364 GKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKE 443 (471)
T ss_pred hhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHh
Confidence 21 1355566555443 422111 1111 46899987643 3889999988888765
Q ss_pred HH
Q 009181 501 TV 502 (541)
Q Consensus 501 ~l 502 (541)
+-
T Consensus 444 ~~ 445 (471)
T COG3033 444 NA 445 (471)
T ss_pred cc
Confidence 53
No 383
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.06 E-value=7.6e-09 Score=104.17 Aligned_cols=176 Identities=22% Similarity=0.220 Sum_probs=125.3
Q ss_pred eEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEE------ecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhh
Q 009181 197 GNMTSGGTESILLAVKSSRDYMRNKRGITRPEMI------IPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYI 270 (541)
Q Consensus 197 G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi------~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i 270 (541)
++++++.+.|++..+.++.. + .+++ ++ ..|+.+...++..|++++.|-. ..+....+++.+|
T Consensus 86 ~~ivnnn~aAVll~~~al~~------~---~EvVis~g~lV~-gg~~~v~d~~~~aG~~l~EvG~--tn~t~~~d~~~AI 153 (395)
T COG1921 86 AAIVNNNAAAVLLTLNALAE------G---KEVVVSRGELVE-GGAFRVPDIIRLAGAKLVEVGT--TNRTHLKDYELAI 153 (395)
T ss_pred eeeECCcHHHHHHHHhhhcc------C---CeEEEEcccccc-CCCCChhHHHHHcCCEEEEecc--cCcCCHHHHHHHh
Confidence 38899989998888887753 1 2443 34 6899999999999999988754 4667999999999
Q ss_pred ccCceEEEeecCCCCCccc--cCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCC-CCcCCCCceEEEeCCCCC
Q 009181 271 NRNTVLIVGSAPGFPHGII--DPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP-FDFSVQGVTSISVDVHKY 347 (541)
Q Consensus 271 ~~~t~~vv~~~~~~~~G~i--d~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~-~~~~~~gvdsis~~~hK~ 347 (541)
+++|.++.-.+.++. |.. .++++++++||++|+++++|.+.|..+-+ .|. -.+...|+|.+++|++|.
T Consensus 154 ne~ta~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~--------e~~l~~~la~GaDLV~~SgdKl 224 (395)
T COG1921 154 NENTALLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDK--------EPDLREALALGADLVSFSGDKL 224 (395)
T ss_pred ccCCeeEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCcccccc--------ccchhHHHhcCCCEEEEecchh
Confidence 999988777776653 443 46788999999999999999998754321 111 123467899999999999
Q ss_pred CCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCC-chHHHHHHHHHHHhH
Q 009181 348 GLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG-GLIAGAWAALMSLGQ 406 (541)
Q Consensus 348 ~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~-~~~a~~~~al~~lg~ 406 (541)
+.||. .| +++..+++..... ..+.-.+-|.+ ..++++.++++.+-.
T Consensus 225 lgGPq-aG-ii~GkKelI~~lq-----------~~~l~Ralrv~K~tla~l~~aLe~y~~ 271 (395)
T COG1921 225 LGGPQ-AG-IIVGKKELIEKLQ-----------SHPLKRALRVDKETLAALEAALELYLQ 271 (395)
T ss_pred cCCCc-cc-eEechHHHHHHHH-----------hhhhhhhhhcCcHhHHHHHHHHHHHcC
Confidence 77777 67 4666666542211 01111222322 347789999987754
No 384
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.97 E-value=5e-10 Score=111.72 Aligned_cols=221 Identities=19% Similarity=0.224 Sum_probs=52.2
Q ss_pred HHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc------hHHHHHhhcCCe
Q 009181 176 VIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS------AYDKAAQYFNIK 249 (541)
Q Consensus 176 v~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~------s~~ka~~~~G~~ 249 (541)
+.+.++.++|++.. +++++...|+++++.++. +| .+||++...-. -+...++..|++
T Consensus 52 v~~ll~~ltgAeaA--------~VvNnnaAAv~L~l~~la------~~---~EvIvsRGelVeiGgsFRip~vm~~sGa~ 114 (367)
T PF03841_consen 52 VEELLCELTGAEAA--------LVVNNNAAAVLLALNTLA------KG---KEVIVSRGELVEIGGSFRIPDVMRQSGAR 114 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc--------cccccccccccccccccc------cc---ccccccccccccccccccccccccccccc
Confidence 55678889988753 688888888888887764 23 56777665433 244566777888
Q ss_pred EEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCC--ccc--cCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCC
Q 009181 250 LWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPH--GII--DPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGY 325 (541)
Q Consensus 250 v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~--G~i--d~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~ 325 (541)
++.|-+. .+..+++++++|+++|.+++-.+++|.. |.. -+++++++++++|++++++|...|.+.-. ...|.
T Consensus 115 lvEVGtt--N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl--~~~gl 190 (367)
T PF03841_consen 115 LVEVGTT--NRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDL--SPYGL 190 (367)
T ss_dssp ------------------------------------------------HHHHHHHHHT--EEEE-TTHHHHHH--HTT--
T ss_pred ccccccc--cccccccccccccccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCc--ccccC
Confidence 8877653 4567899999999999999988877752 322 37999999999999999999998765421 22232
Q ss_pred C-CC-CCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCC-chHHHHHHHHH
Q 009181 326 P-IP-PFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG-GLIAGAWAALM 402 (541)
Q Consensus 326 ~-~p-~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~-~~~a~~~~al~ 402 (541)
+ .| -.+....|+|.+++|+.|.+.||. +|+ ++..+++...... .|....-|.+ ..++++.++++
T Consensus 191 ~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGi-I~Gkk~lI~~lk~-----------~pl~RalrvdK~tla~L~atL~ 257 (367)
T PF03841_consen 191 PDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGI-IVGKKELIEKLKK-----------HPLGRALRVDKLTLAALEATLR 257 (367)
T ss_dssp --------CCCCT-SEEEEETTSSSSS-S--EE-EEEEHHHHHHHHH-----------HHHTTT-B--HHHHHHHHHHHH
T ss_pred ccccHHHHHhhcCCCEEEEECCCcCCCCC-eEE-EEeCHHHHHHHhh-----------CCCcceEeeCHHHHHHHHHHHH
Confidence 1 11 234567899999999999977776 685 5555555432210 1111122332 33678888887
Q ss_pred HHhH-H----------HHHHHHHHHHHHHHHHHHHhhcC
Q 009181 403 SLGQ-E----------GYLENTKAIMEVSESIQKGIKEI 430 (541)
Q Consensus 403 ~lg~-~----------g~~~~~~~~~~~a~~l~~~L~~~ 430 (541)
.+-. + -+....+.+.+.++.|...|+..
T Consensus 258 ~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 258 LYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp H--------------------------------------
T ss_pred HHHHhhccccccccccccccccccccccccccccccccc
Confidence 6642 1 12333455555667777766653
No 385
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.96 E-value=2.5e-08 Score=98.50 Aligned_cols=255 Identities=17% Similarity=0.171 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEe-cCCccchHHHHH---
Q 009181 168 SVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMII-PVSAHSAYDKAA--- 243 (541)
Q Consensus 168 ~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~-~~~~h~s~~ka~--- 243 (541)
+-..+|+ -.++.||.+..= | -.---+||.|+..++.+... +| |+++. +-.-|-...+..
T Consensus 55 GRd~le~----iyA~vfgaE~AL----V-Rpq~vSGTHAi~~~Lfg~Lr-----pG---D~ll~~tG~PYDTL~~VIG~~ 117 (403)
T PF06838_consen 55 GRDKLER----IYADVFGAEDAL----V-RPQFVSGTHAIALALFGVLR-----PG---DELLSITGKPYDTLEEVIGIR 117 (403)
T ss_dssp HHHHHHH----HHHHHCT-SEEE----E-ETTS-SHHHHHHHHHHHH-------TT----EEEESSSS--CCHHHHHTSS
T ss_pred cHHHHHH----HHHHHhCchhhh----h-cccccchHHHHHHHHHhcCC-----CC---CeEEEcCCCchhhHHHHhCCC
Confidence 4445555 889999998542 1 01124689999999999764 77 88864 444455566665
Q ss_pred -------hhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCC----CCCccccCHHHHHHHHHHc--CCEEEEeC
Q 009181 244 -------QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPG----FPHGIIDPIQELGELALSH--GTCLHVDL 310 (541)
Q Consensus 244 -------~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~----~~~G~id~i~~I~~la~~~--~i~lhvD~ 310 (541)
+-+|++...||+.+++.+|.+.++++++++|++|.+.--. -+.=.+++|+++.+.+|+. ++++.||-
T Consensus 118 g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDN 197 (403)
T PF06838_consen 118 GNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDN 197 (403)
T ss_dssp SSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-
T ss_pred CCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 3457899999999999999999999999999999887532 1222446677777777765 79999999
Q ss_pred CcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCC-CceEEEEeccccccc-ccccccccCCCccCCCcccCC
Q 009181 311 CLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPK-GTSVVLYRNREIRKH-QFVAVTEWSGGLYVSPTVAGS 388 (541)
Q Consensus 311 a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~-g~g~ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gs 388 (541)
|||-|+- .......|+|.+..|.=|...|+. .+|..++.++++... .++...+-.|.. .|.
T Consensus 198 CYGEFvE-----------~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e------~G~ 260 (403)
T PF06838_consen 198 CYGEFVE-----------TQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKE------VGA 260 (403)
T ss_dssp TTTTTTS-----------SS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGG------SS-
T ss_pred Ccceecc-----------ccCccccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccc------ccc
Confidence 9998764 233356789999999999843322 244455655655443 232222222211 222
Q ss_pred CCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecCCC----eeEEEEecCCC-CHHHHHHHHHhC
Q 009181 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPD----MTIVAFGSDVV-DIFEVNDIMSSK 463 (541)
Q Consensus 389 r~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~----~~~v~f~~~~~-~~~~l~~~l~~~ 463 (541)
..+..- ..+ .|.---...+....+-+...+..++++ |+++...+. -.+-++.+.+. ..-.+++.+.+.
T Consensus 261 t~~~~R-~~~-----QGlFlAP~vV~eAlKgaif~A~~fe~l-G~~v~P~~~~~R~DiIQai~l~~~e~l~~FC~~iQ~~ 333 (403)
T PF06838_consen 261 TLGTNR-LMF-----QGLFLAPHVVGEALKGAIFAAALFEKL-GFEVSPKPDDPRSDIIQAIELGSPEKLIAFCQGIQAA 333 (403)
T ss_dssp -TTTHH-HHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHT-T-EEES-TTS--SSS-EEEE-SSHHHHHHHHHHHHHT
T ss_pred CcchHH-HHH-----hHHhhchHHHHHHHHHHHHHHHHHHHc-CCcCCCCCCCCCCceEEEEECCCHHHHHHHHHHHHhc
Confidence 222110 111 121122344555566666667777777 999875433 23445555432 344555555554
No 386
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.84 E-value=5.4e-07 Score=89.24 Aligned_cols=300 Identities=15% Similarity=0.085 Sum_probs=178.6
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCcc--chHHHHHh
Q 009181 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAH--SAYDKAAQ 244 (541)
Q Consensus 167 ~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h--~s~~ka~~ 244 (541)
....++..++++.+++++++|++- +| ++...|+|....++.+.+.. +++ .-++...++ .+...+-.
T Consensus 46 k~~~~v~~~a~~~lreLl~iPd~Y---~V-lflqGGat~qf~~~p~nLl~----~~~----~~yv~~g~Ws~~a~~eA~~ 113 (365)
T COG1932 46 KEFKNVLEEAEKDLRELLNIPDDY---KV-LFLQGGATGQFAMAPMNLLG----KRG----TDYVDTGAWSEFAIKEAKK 113 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCc---eE-EEEcCccHHHHHHHHHhhhc----ccC----ceeEeeeehhHhHHHHHHH
Confidence 345566667899999999999876 34 45566678888887777653 122 103333333 33333333
Q ss_pred hcC-CeEEEeeCCC---CCccCHHHHHHhhccCceEEEeecCCCCCccccC-HHHHHHHHHHcCCEEEEeCCcccchhhh
Q 009181 245 YFN-IKLWRVPVDK---EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP-IQELGELALSHGTCLHVDLCLGGFVLPF 319 (541)
Q Consensus 245 ~~G-~~v~~v~~~~---~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~-i~~I~~la~~~~i~lhvD~a~gg~~~~f 319 (541)
+.. .++..+...+ ..-.+++..+ +.++...|..+.-.|.+|+--+ .+.+.. +.++++|...+.+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~v~~~p~~~~-----~~~~v~D~SS~ilsr-- 184 (365)
T COG1932 114 VGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVEVPELPDIGS-----DGLLVADASSAILSR-- 184 (365)
T ss_pred hcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccceEccCCCCCCC-----CceEEEecccHHhcC--
Confidence 332 3333322222 2234444433 4555666888888888997644 333321 278999999765443
Q ss_pred hhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCch-HHHHH
Q 009181 320 AKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGL-IAGAW 398 (541)
Q Consensus 320 ~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~-~a~~~ 398 (541)
++|+ ...|.+.++.+|. +||-|.+++++|+..+-+..-...+.- -.|......++-...+ +++.+
T Consensus 185 ---------~iDv--sk~dviyagaQKn-lGpaGltvvIvr~~~l~r~~~~~~P~i--f~y~~~~~~~s~yNTPptfa~y 250 (365)
T COG1932 185 ---------PIDV--SKYDVIYAGAQKN-LGPAGLTVVIVRPDLLERAESYTLPSI--FDYLTHADNGSMYNTPPTFAWY 250 (365)
T ss_pred ---------CCCh--hHcceEEEehhhc-cCccceEEEEEcHHHHhcccccCCchH--hhchhhhccCCccCCcHHHHHH
Confidence 2443 3458899999999 899999988888765443211101110 0111112223333322 22333
Q ss_pred H---HHHHH-hHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC---CCeeEEEEecCCCCH-HHHHHHHHhCCce-ecc
Q 009181 399 A---ALMSL-GQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR---PDMTIVAFGSDVVDI-FEVNDIMSSKGWH-LNP 469 (541)
Q Consensus 399 ~---al~~l-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~---~~~~~v~f~~~~~~~-~~l~~~l~~~G~~-~~~ 469 (541)
. +++.+ ...|++.+.++..+.++.|.+.+.+.+-..-... .....|+|...+.+. ..+...+.++|.. +..
T Consensus 251 ~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~~ld~~fv~eae~~gl~~lkG 330 (365)
T COG1932 251 LLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVDAELDKGFVAEAEAAGLIYLKG 330 (365)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCcHHHHHHHHHHHHHcCCceecc
Confidence 3 33444 3457999999999999999999998733332222 235788898775433 4556667777754 444
Q ss_pred CCCCCeEEEEecCC-CHHHHHHHHHHHHHHHHH
Q 009181 470 LQRPNSIHICVTLQ-HVAVVDVFLRDLRESVET 501 (541)
Q Consensus 470 ~~~~~~iRi~~~~~-~~e~id~~i~~L~~~~~~ 501 (541)
...++.+|+++... ..++++.+++-++.+.+.
T Consensus 331 hr~vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 331 HRSVGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred ccCCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 44557799988653 449999999999887654
No 387
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.57 E-value=2.4e-07 Score=87.03 Aligned_cols=330 Identities=15% Similarity=0.113 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCe
Q 009181 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIK 249 (541)
Q Consensus 170 ~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~ 249 (541)
..+-.++....-.+.|.....+ |-++---.-+++.+++.++|.+..+. .-|+-+....-|..|..-..|.+
T Consensus 56 ~~isne~a~~~i~l~glhav~n----c~vvpl~tgmslslc~~s~r~krpka-----kyiiw~ridqks~~ksi~~agfe 126 (432)
T KOG3843|consen 56 ACISNEFAKDAIHLAGLHAVAN----CFVVPLATGMSLSLCFLSLRHKRPKA-----KYIIWLRIDQKSCFKSIIHAGFE 126 (432)
T ss_pred HHHHHHHHHHHHHHhhhhhhhc----eeEEeccccccHHHHHHHHhhcCCcc-----cEEEEEecchHHHHHHHHhcCCC
Confidence 3444555556666777653321 42333334467778888887632222 34778888888888999999998
Q ss_pred EEEeeCC---CCCccCHHHHHHhhccC-ceEEEeecCC---CCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhh
Q 009181 250 LWRVPVD---KEFRADVKAIKKYINRN-TVLIVGSAPG---FPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (541)
Q Consensus 250 v~~v~~~---~~~~~d~~~Le~~i~~~-t~~vv~~~~~---~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~ 322 (541)
++.|..- +....|++++++.|++. +-++...+.+ +..-..|++++|+.+|..|+++-+|..+||--.--.+..
T Consensus 127 piiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~ 206 (432)
T KOG3843|consen 127 PIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHK 206 (432)
T ss_pred ceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHH
Confidence 8777542 24578999999988753 2222222222 223345789999999999999999999998542211111
Q ss_pred cCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHH
Q 009181 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALM 402 (541)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~ 402 (541)
.. -....-.+|.+.-+..|.+..|-|..++..-++...+. ....|+|....+| ..-+..++-
T Consensus 207 ia-----a~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~---iak~ypgrasa~p----------s~dllitll 268 (432)
T KOG3843|consen 207 IA-----AAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQE---IAKMYPGRASASP----------SLDLLITLL 268 (432)
T ss_pred HH-----HHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHH---HHHhCCCccccCc----------cHHHHHHHH
Confidence 00 01122335777777789988888876544333333221 1122344333333 225667778
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhcCC---CeEEecCCCee-EEEEecCCC------CHHHHHHHHHhCCce----ec
Q 009181 403 SLGQEGYLENTKAIMEVSESIQKGIKEIP---ELFIIGRPDMT-IVAFGSDVV------DIFEVNDIMSSKGWH----LN 468 (541)
Q Consensus 403 ~lg~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~~~~~~-~v~f~~~~~------~~~~l~~~l~~~G~~----~~ 468 (541)
++|..+|.+......++--+++..+.+.. +=.++..|... -.+...... ....+...|-.+|+. ++
T Consensus 269 ~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~~~e~l~~~p~n~is~amtl~ti~~~k~kavt~~gsilfak~isgarvv~ 348 (432)
T KOG3843|consen 269 SLGQNAFKELFGEQKEMFLKLRNKIIKFAEAIGECLLETPENEISLAMTLKTIDEAKDKAVTLFGSILFAKGISGARVVP 348 (432)
T ss_pred HhchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCchhhhhhhhccCChHHhhHHHHHHHHHHhccccCceEee
Confidence 88999999999888888888877775531 22233333311 112222222 123445566666631 11
Q ss_pred cCCC--------------------CCeEEEEec-CCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCcchhhhhcCCCCChh
Q 009181 469 PLQR--------------------PNSIHICVT-LQHVAVVDVFLRDLRESVETVKQNPGPANGSLAPIYGAAGRMPDRG 527 (541)
Q Consensus 469 ~~~~--------------------~~~iRi~~~-~~~~e~id~~i~~L~~~~~~l~~~~~~~~~~~~~~yg~~~~~~~~~ 527 (541)
.-+. .+++..+.. .+...|+|+|+++|.++++.++++..+. .-.+|.-+..||-..
T Consensus 349 ~~q~kttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~~~ke~ake---dd~~~~~~~~i~i~e 425 (432)
T KOG3843|consen 349 LGQMKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAAFRKELAKE---DDDINDKGEDIDIEE 425 (432)
T ss_pred ccccceeeeceEEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHHHHHhhc---ccccccccccCCHHH
Confidence 1000 022223221 2334899999999999998877655432 334566667777555
Q ss_pred HH
Q 009181 528 MV 529 (541)
Q Consensus 528 ~~ 529 (541)
+.
T Consensus 426 ~~ 427 (432)
T KOG3843|consen 426 MA 427 (432)
T ss_pred hh
Confidence 44
No 388
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.57 E-value=9.7e-06 Score=78.22 Aligned_cols=295 Identities=15% Similarity=0.215 Sum_probs=177.0
Q ss_pred HhCCCCCC-CCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCC-eEEEeeCC--CC
Q 009181 183 LLGNKEKA-SGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNI-KLWRVPVD--KE 258 (541)
Q Consensus 183 l~g~~~~~-~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~-~v~~v~~~--~~ 258 (541)
++|.+... ..+++.|+-+-+||.|+..+..-+..+..+ ..|+++.+++......++-.|. ++...+.- ++
T Consensus 87 ~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~------~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~ 160 (410)
T KOG1412|consen 87 LLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNK------NTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAEN 160 (410)
T ss_pred hcCCCchhhhhccccceeeccccchhhhhHHHHHHhccc------ceeEecCCchhHHHHHHHHcCCceeeeeeeecCCC
Confidence 35554222 223467889999999998887765433322 5699999999999999999995 56666653 35
Q ss_pred CccCHHHHHHhhccCc---eEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 259 FRADVKAIKKYINRNT---VLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 259 ~~~d~~~Le~~i~~~t---~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
-.+|.+.+...|+..| +.++-...+||||. || ..+|++..++.+..-..|-+|-||+- ..... ..+.
T Consensus 161 k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGm-DPT~EQW~qia~vik~k~lf~fFDiAYQGfAS---GD~~~--DawA 234 (410)
T KOG1412|consen 161 KCVDLEGFLSDLESAPEGSIIILHACAHNPTGM-DPTREQWKQIADVIKSKNLFPFFDIAYQGFAS---GDLDA--DAWA 234 (410)
T ss_pred ceecHHHHHHHHhhCCCCcEEeeeccccCCCCC-CCCHHHHHHHHHHHHhcCceeeeehhhccccc---CCccc--cHHH
Confidence 5689999888887654 33444444899995 44 56899999999999999999988863 11000 0000
Q ss_pred ---cCCCCc-eEEEeCCCCCCCCCCC--ceEE--EEeccccccc---c--cccccccCCCccCCCcccCCCCCchHHHHH
Q 009181 332 ---FSVQGV-TSISVDVHKYGLAPKG--TSVV--LYRNREIRKH---Q--FVAVTEWSGGLYVSPTVAGSRPGGLIAGAW 398 (541)
Q Consensus 332 ---~~~~gv-dsis~~~hK~~~~p~g--~g~l--l~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~ 398 (541)
|-..|. -+++-|+.|- ++-++ +|.+ +.+++..... | ......| ..|.-.|-|.-+-+...-
T Consensus 235 iR~fV~~g~e~fv~QSFaKN-fGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~-----SNPPAyGArIV~kvL~tP 308 (410)
T KOG1412|consen 235 IRYFVEQGFELFVCQSFAKN-FGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNW-----SNPPAYGARIVHKVLSTP 308 (410)
T ss_pred HHHHHhcCCeEEEEhhhhhh-cccccccccceEEEecChhHHHHHHHHHHHHHhhcc-----CCCcchhhHHHHHHhcCH
Confidence 112334 3445578887 34332 4433 3444433211 1 1111222 223333322111100000
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC--CC-eEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCe
Q 009181 399 AALMSLGQEGYLENTKAIMEVSESIQKGIKEI--PE-LFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNS 475 (541)
Q Consensus 399 ~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~--~~-~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~ 475 (541)
.++..-.+.++.+..++.+++..|++.|.++ || +.-+ -.+.++++|. +.+..++........+.+...|
T Consensus 309 -~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI-~~QiGMFSyT--GLtp~qV~~li~~h~vyLl~~G---- 380 (410)
T KOG1412|consen 309 -ELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHI-TQQIGMFSYT--GLTPAQVDHLIENHKVYLLSDG---- 380 (410)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH-Hhhccceeec--CCCHHHHHHHHHhceEEEecCC----
Confidence 1111123456778889999999999998875 33 1111 1235565554 5556565555555556555433
Q ss_pred EEEEecCCCHHHHHHHHHHHHHHHHHHHc
Q 009181 476 IHICVTLQHVAVVDVFLRDLRESVETVKQ 504 (541)
Q Consensus 476 iRi~~~~~~~e~id~~i~~L~~~~~~l~~ 504 (541)
|+++...|+..+|...+++.+.+..+..
T Consensus 381 -RInisGLN~~NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 381 -RINISGLNMKNVEYVAKAIDETVRAIKS 408 (410)
T ss_pred -cEeeeccccccHHHHHHHHHHHHHhhcc
Confidence 7889888888899999999999887654
No 389
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=98.46 E-value=7.3e-06 Score=83.26 Aligned_cols=196 Identities=18% Similarity=0.241 Sum_probs=135.5
Q ss_pred CCeEEecCCccchH-HHHHhhcCCeEEEeeC--C--C---CCccCHHHHHHhhcc------CceEEEeecCCCCCccccC
Q 009181 226 RPEMIIPVSAHSAY-DKAAQYFNIKLWRVPV--D--K---EFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDP 291 (541)
Q Consensus 226 ~~~vi~~~~~h~s~-~ka~~~~G~~v~~v~~--~--~---~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~ 291 (541)
.|.+++++..|+-. ..+|+.+|+....|.+ + . .|+||...+++.|++ +|.+++..-+.+-.|..|.
T Consensus 231 aPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDm 310 (838)
T KOG0630|consen 231 APTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDM 310 (838)
T ss_pred CceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHH
Confidence 57899999999884 5678899985444332 2 2 569999999999975 4788899999999999999
Q ss_pred HHHHHHHHHHcC-CEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccc
Q 009181 292 IQELGELALSHG-TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFV 370 (541)
Q Consensus 292 i~~I~~la~~~~-i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~ 370 (541)
|-+|.++|++++ .|||.-+- |-.++.|.+.-. -...-...+||++.+.--|++.|.--= ++...+ +....
T Consensus 311 i~kildi~eahakfWLHasGh-aiAALt~aepnn----il~HV~eqldSMal~ialWLGiPSaPi-V~LHRP-leg~a-- 381 (838)
T KOG0630|consen 311 ILKILDICEAHAKFWLHASGH-AIAALTCAEPNN----ILGHVEEQLDSMALNIALWLGIPSAPI-VLLHRP-LEGSA-- 381 (838)
T ss_pred HHHHHHHHHHhhheeEeeccc-hhhheeecCccc----chhHHHHHHhhccchhHHHhCCCCCce-EEeecc-ccccc--
Confidence 999999999986 99998764 111111111000 011112235999999999966655433 333222 11000
Q ss_pred cccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEecC
Q 009181 371 AVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGR 438 (541)
Q Consensus 371 ~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~ 438 (541)
...+-+-.+...|-.++ .+|.+++++|...+.++++....+++.+.+.+.+.+++++++.
T Consensus 382 ------aSafesdpi~rekLdaL--p~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig~ 441 (838)
T KOG0630|consen 382 ------ASAFESDPILREKLDAL--PLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIGH 441 (838)
T ss_pred ------chhcccChHHHHhhccc--hHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEecc
Confidence 00111111223344555 8999999999999999999999999999999999999999864
No 390
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.41 E-value=8.6e-06 Score=78.19 Aligned_cols=145 Identities=24% Similarity=0.264 Sum_probs=104.2
Q ss_pred HHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEe-cCCccchHHHH----------HhhcC
Q 009181 179 MTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMII-PVSAHSAYDKA----------AQYFN 247 (541)
Q Consensus 179 ~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~-~~~~h~s~~ka----------~~~~G 247 (541)
-.++.||.+..- + -.---+||.|+..|+..... +| |+++. +..-|-..+.. .+-+|
T Consensus 73 vyA~vf~aE~a~----V-Rpq~isGTHAI~~aLfg~LR-----pg---Dell~i~G~PYDTLeevIG~rg~~~gSL~dfg 139 (416)
T COG4100 73 VYAQVFGAEAAL----V-RPQIISGTHAIACALFGILR-----PG---DELLYITGSPYDTLEEVIGLRGEGQGSLKDFG 139 (416)
T ss_pred HHHHHhccccce----e-eeeeecchhHHHHHHHhccC-----CC---CeEEEecCCcchhHHHHhccCCCCcccHHHhC
Confidence 667788887543 1 12234579999999887653 77 88743 33333333333 34457
Q ss_pred CeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCC----CCCccccCHHHHHHHHHHc--CCEEEEeCCcccchhhhhh
Q 009181 248 IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPG----FPHGIIDPIQELGELALSH--GTCLHVDLCLGGFVLPFAK 321 (541)
Q Consensus 248 ~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~----~~~G~id~i~~I~~la~~~--~i~lhvD~a~gg~~~~f~~ 321 (541)
++.+-||+..+|++|.+.++.+++++|++|.+.-.. -|.=.+.+|+++.++.++- ++.+.||.|||-|+-
T Consensus 140 i~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE---- 215 (416)
T COG4100 140 IKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVE---- 215 (416)
T ss_pred cceeecccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhh----
Confidence 889999999999999999999999999998876432 2333556677888887775 699999999998864
Q ss_pred hcCCCCCCCCcCCCCceEEEeCCCCC
Q 009181 322 KLGYPIPPFDFSVQGVTSISVDVHKY 347 (541)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~~~hK~ 347 (541)
......-|+|.+..|.=|.
T Consensus 216 -------~~EPt~vGaDliAGSLIKN 234 (416)
T COG4100 216 -------EKEPTHVGADLIAGSLIKN 234 (416)
T ss_pred -------ccCccccchhhhccceeeC
Confidence 2333556889999998887
No 391
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.36 E-value=6.3e-06 Score=80.57 Aligned_cols=282 Identities=12% Similarity=0.120 Sum_probs=168.0
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCC--CCCccCHHHHHHhhcc---
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD--KEFRADVKAIKKYINR--- 272 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~--~~~~~d~~~Le~~i~~--- 272 (541)
+-|-+||.|+..+..-+.... ++ ..|++|.+++....+..+..|+.+.....- .+..+|.+.+-+-+.+
T Consensus 124 vQ~lSGTGaLriga~Fl~~f~---~~---~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~ 197 (427)
T KOG1411|consen 124 VQTLSGTGALRVGAEFLARFY---PS---RDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPE 197 (427)
T ss_pred EEeccCcchhhHHHHHHHhhc---cc---cceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCCC
Confidence 445668888777665543222 22 579999999888888888889988777653 3667787777666654
Q ss_pred CceEEEeecCCCCCccc---cCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCC-CcCCCCceEE-EeCCCCC
Q 009181 273 NTVLIVGSAPGFPHGII---DPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF-DFSVQGVTSI-SVDVHKY 347 (541)
Q Consensus 273 ~t~~vv~~~~~~~~G~i---d~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~-~~~~~gvdsi-s~~~hK~ 347 (541)
.-++++-...+||||+= +..++|.++.++.+..-+.|.||-||+-- ....+.-.. -|...|..++ +-+.-|-
T Consensus 198 gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG---~~d~DA~avR~F~~~g~~~~laQSyAKN 274 (427)
T KOG1411|consen 198 GSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASG---DLDKDAQAVRLFVEDGHEILLAQSYAKN 274 (427)
T ss_pred CcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccC---CchhhHHHHHHHHHcCCceEeehhhhhh
Confidence 33555556667899953 33678999999999999999999888641 100000000 0123344433 3466676
Q ss_pred CCCCCC--ceEE--EEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 009181 348 GLAPKG--TSVV--LYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESI 423 (541)
Q Consensus 348 ~~~p~g--~g~l--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~~g~~~~~~~~~~~a~~l 423 (541)
+ |-+| +|.+ ++.+.+.....-.-..-...+.|.+|.+.|.|..+.+..-- .|...-....+-+.++++.+++.|
T Consensus 275 M-GLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~-~l~~~W~~evk~MadRi~~mR~~L 352 (427)
T KOG1411|consen 275 M-GLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDP-DLKNQWLGEVKGMADRIISMRQQL 352 (427)
T ss_pred c-chhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCCh-HHHHHHHHHHHHHHHhhhhhHHHH
Confidence 2 3333 4433 44443322211000001112456778888877544322111 122222345677889999999999
Q ss_pred HHHhhcCCCeEE----ecCCCeeEEEEecCCCCHHHHHHHHHhC-CceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 009181 424 QKGIKEIPELFI----IGRPDMTIVAFGSDVVDIFEVNDIMSSK-GWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRES 498 (541)
Q Consensus 424 ~~~L~~~~~~~v----~~~~~~~~v~f~~~~~~~~~l~~~l~~~-G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~ 498 (541)
.+.|.+. +-.. + ..+.+++||.. .+..++ +.|.++ .+.++.- -|+|+...++..++.+.++|.++
T Consensus 353 ~d~L~~~-gs~~~W~hI-~~QIGMF~fTg--l~peQv-~~l~ke~~iYmT~d-----GRiS~aG~ss~nV~yLa~aih~v 422 (427)
T KOG1411|consen 353 FDALEKE-GSPGNWSHI-TKQIGMFCFTG--LNPEQV-DWLTKEYHIYLTKD-----GRISMAGLSSSNVPYLADAIHAV 422 (427)
T ss_pred hHHhhcC-CCCccHHHH-HHhhheeeecC--CCHHHH-HHHHhhheeeeccC-----ceEeeccccccCCcccchhhHhH
Confidence 9999875 2211 1 13467888874 345444 444443 3444432 48999888888888888888776
Q ss_pred HH
Q 009181 499 VE 500 (541)
Q Consensus 499 ~~ 500 (541)
.+
T Consensus 423 tk 424 (427)
T KOG1411|consen 423 TK 424 (427)
T ss_pred hc
Confidence 54
No 392
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.23 E-value=1.3e-05 Score=79.15 Aligned_cols=262 Identities=14% Similarity=0.140 Sum_probs=138.0
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCC-CCccCHHHHHHhhccCceE
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVL 276 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~ 276 (541)
++.+|+|+-+..|+-|+...... .-+.-.|+.+.+.|+++.....++.-..-...-|. .+. ..=+..+.+
T Consensus 70 V~GtGsTQL~~AalyALSp~~~~--~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~Gda~~~~-------~~~~~~~~I 140 (363)
T PF04864_consen 70 VFGTGSTQLFNAALYALSPNASP--SSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAGDASNFK-------NSDNPSPYI 140 (363)
T ss_dssp EEECHHHHHHHHHHHHHCHHT-T--TSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEEECCCGT-------T-S-CCGEE
T ss_pred EEcCCHHHHHHHHHHhcCCCCCC--CCCCceeEecCCCccchHHHHHhccccCccccccHHhhc-------cCCCCCCeE
Confidence 89999999999999998543111 11123689999999999999888865443333332 221 111235777
Q ss_pred EEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCC-CCCCCCce
Q 009181 277 IVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKY-GLAPKGTS 355 (541)
Q Consensus 277 vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~-~~~p~g~g 355 (541)
=++|.||||.|.+-. . +.+.-+..++.|-||-.... . ++. ....=|++-++..|. |.++...|
T Consensus 141 ElVTSPNNPDG~lr~--~---V~~g~~~k~I~D~AYYWPhy---------T-pI~-~~aD~DiMLFT~SK~TGHAGSR~G 204 (363)
T PF04864_consen 141 ELVTSPNNPDGQLRE--A---VLNGSSGKVIHDLAYYWPHY---------T-PIT-APADHDIMLFTLSKLTGHAGSRFG 204 (363)
T ss_dssp EEEESS-TTT-----------SSTTTEEEEEEE-TT-STTT---------S-----S-B--SEEEEEHHHHCS-GGG-EE
T ss_pred EEEeCCCCCcccccc--h---hcCCCCcceeeeeeeecccc---------c-ccC-CCCCCceEEEEEecccCccccccc
Confidence 789999999997621 1 12334566799999843322 0 111 112227888888888 56666789
Q ss_pred EEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHHHHHHHH-------hHH-----HHHHHHHHHHHHHHHH
Q 009181 356 VVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL-------GQE-----GYLENTKAIMEVSESI 423 (541)
Q Consensus 356 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~l-------g~~-----g~~~~~~~~~~~a~~l 423 (541)
|.++++++..+.......--.-|. ||- +|.-+++.+ +.+ -+.=-.+...++=+.|
T Consensus 205 WAlVKD~~Va~kM~~y~~lnTiGv--------S~d-----sQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L 271 (363)
T PF04864_consen 205 WALVKDEEVAKKMTKYMELNTIGV--------SRD-----SQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKL 271 (363)
T ss_dssp EEEES-HHHHHHHHHHHHHHCSS----------HH-----HHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHH
T ss_pred eeeecCHHHHHHHHHHHHHhcccC--------cHH-----HHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHH
Confidence 999999987654321111000111 111 122222222 111 1112223333444567
Q ss_pred HHHhhcCCCeEEecC-------------CCeeEEEEecCCCCHHHHHHHHHhCCceecc---CC-CCCeEEEEecCCCHH
Q 009181 424 QKGIKEIPELFIIGR-------------PDMTIVAFGSDVVDIFEVNDIMSSKGWHLNP---LQ-RPNSIHICVTLQHVA 486 (541)
Q Consensus 424 ~~~L~~~~~~~v~~~-------------~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~---~~-~~~~iRi~~~~~~~e 486 (541)
++.+.+...|.+-.- |...+-+++++.....+....|++.|+.-.. ++ .+.++|+|+-. +.+
T Consensus 272 ~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~I~tr~G~~fga~~ryVRlSml~-~~d 350 (363)
T PF04864_consen 272 RAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAKIITRSGVLFGADSRYVRLSMLK-RDD 350 (363)
T ss_dssp HHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTTEEEEEGGGGTS-TTEEEEESSS--HH
T ss_pred HHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHHhCCcccCCCCccCCCCCeEEEeccC-CHH
Confidence 777776655655322 3356677788755455667778877765322 22 24799999874 458
Q ss_pred HHHHHHHHHHHH
Q 009181 487 VVDVFLRDLRES 498 (541)
Q Consensus 487 ~id~~i~~L~~~ 498 (541)
+.|.|+++|..+
T Consensus 351 ~Fd~l~~rL~~l 362 (363)
T PF04864_consen 351 DFDQLLERLSKL 362 (363)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhh
Confidence 999999999764
No 393
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.09 E-value=0.00018 Score=69.29 Aligned_cols=279 Identities=14% Similarity=0.106 Sum_probs=151.3
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhc--------CC-e--EE-EeeCCCC--Cc---
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF--------NI-K--LW-RVPVDKE--FR--- 260 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~--------G~-~--v~-~v~~~~~--~~--- 260 (541)
.|+++|+|||.+|++.+|+....+ |.|.+.-..|.-.....+.. +. + .+ .-|+.+. |+
T Consensus 106 ~F~NSGSEANDLALRLAR~ftkhq-----DvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~ 180 (452)
T KOG1403|consen 106 FFVNSGSEANDLALRLARNFTKHQ-----DVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRD 180 (452)
T ss_pred EEecCCchhhHHHHHHHHhhcccC-----ceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccccccccc
Confidence 899999999999999999865443 54544433343333333322 11 2 22 2244321 11
Q ss_pred ----------cCHHHHHHhhcc------CceEEEeecCCCCCccccC----HHHHHHHHHHcCCEEEEeCCcccchhhhh
Q 009181 261 ----------ADVKAIKKYINR------NTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLGGFVLPFA 320 (541)
Q Consensus 261 ----------~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~----i~~I~~la~~~~i~lhvD~a~gg~~~~f~ 320 (541)
.=.+.+++.+++ ...+.+..+-.+--|.+.| ++++++..+.+|-..+.|+++-||-.
T Consensus 181 ~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGR--- 257 (452)
T KOG1403|consen 181 KMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGR--- 257 (452)
T ss_pred ccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccc---
Confidence 112344444432 2445556666666787766 78999999999999999999987743
Q ss_pred hhcCCCCCCCCcCCCCc--eEEEeCCCCCCCCCCCceEEEEecccccccccccccccCCCccCCCcccCCCCCchHHHHH
Q 009181 321 KKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAW 398 (541)
Q Consensus 321 ~~~g~~~p~~~~~~~gv--dsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~ 398 (541)
.|. -.+.|...++ |++++. |-++.+..++++..+. ++.+..-.....|. ...|+...++.
T Consensus 258 --vG~--hyWafq~y~fiPDIVtmg--KpmGNGhPVa~Vattk-eIA~Af~atgv~YF-----------NTyGGnPVsCA 319 (452)
T KOG1403|consen 258 --VGS--HYWAFQTYNFIPDIVTMG--KPMGNGHPVAAVATTK-EIAQAFHATGVEYF-----------NTYGGNPVSCA 319 (452)
T ss_pred --cch--hhhhhhhhccccchheec--ccCCCCCeeeEEeccH-HHHHHhccccceeh-----------hccCCCchhHH
Confidence 221 0122333332 666654 5555555677655543 33322111011111 11122233555
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEecCCCe--eEEEEecC-C-----C---CHHHHHHHHHhCC-c
Q 009181 399 AALMSLGQEGYLENTKAIMEVSESIQKGIKEI-PELFIIGRPDM--TIVAFGSD-V-----V---DIFEVNDIMSSKG-W 465 (541)
Q Consensus 399 ~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~~~--~~v~f~~~-~-----~---~~~~l~~~l~~~G-~ 465 (541)
.++..+..-.-+++.++..+...+|...|++. ...+++++-.. -++-+.+. + . ....+..+|++.- +
T Consensus 320 v~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~V 399 (452)
T KOG1403|consen 320 VGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRV 399 (452)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhE
Confidence 55544544444566666777777888777764 24667776442 23333321 1 1 1334556666654 5
Q ss_pred eeccCCCC-CeEEEEec-CCCHHHHHHHHHHHHHHHHHH
Q 009181 466 HLNPLQRP-NSIHICVT-LQHVAVVDVFLRDLRESVETV 502 (541)
Q Consensus 466 ~~~~~~~~-~~iRi~~~-~~~~e~id~~i~~L~~~~~~l 502 (541)
.+++-+.. +.+.|-.+ ..+.+++++++..|.+++..+
T Consensus 400 LlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT~m 438 (452)
T KOG1403|consen 400 LLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILTVM 438 (452)
T ss_pred EEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHHHH
Confidence 55544322 45555332 234477888888888887633
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.08 E-value=0.00082 Score=64.40 Aligned_cols=328 Identities=16% Similarity=0.107 Sum_probs=187.6
Q ss_pred HHHHHHHHHHhhcccCCCCcc------cchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEE-cCcHHHHHHHHHHHHHH
Q 009181 144 HFSLINEACSMFAHTNPLHLD------IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNM-TSGGTESILLAVKSSRD 216 (541)
Q Consensus 144 ~~~~~~~~~~~~~~~n~~~~~------~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~-t~Ggt~a~~~al~a~r~ 216 (541)
+.+.+-++-.+.++-|..+-. .+....++..+....++++++.|+.. ++ +| ..|||.-......-+..
T Consensus 19 p~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~---~v--lf~QGGGt~qFaAv~lNL~g 93 (370)
T KOG2790|consen 19 PESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNY---KV--LFLQGGGTGQFAAVPLNLIG 93 (370)
T ss_pred CHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCce---eE--EEEeCCCcccccccchhhhc
Confidence 345555565666666654421 13345566777888999999999876 34 44 44555443332222211
Q ss_pred HHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCC-C--CccCHHHHHHhhccCceEEEeecCCCCCccccC-H
Q 009181 217 YMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK-E--FRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP-I 292 (541)
Q Consensus 217 ~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~-~--~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~-i 292 (541)
-+.|-..+-|+...-.--+++.|-++--...+..+..+ + -..|.+.++ .+++-..|..|.-.+.+|+-.| +
T Consensus 94 ---lK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~--~~~da~yvyyCaNETVHGVEf~~~ 168 (370)
T KOG2790|consen 94 ---LKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWE--LNPDASYVYYCANETVHGVEFDFI 168 (370)
T ss_pred ---cccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcc--cCCCccEEEEecCceeeceecCCC
Confidence 01232235566665555566666665555555444433 2 224555554 2445568888998899997643 3
Q ss_pred HHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCCCCCCCCCCCceEEEEecccccccccc--
Q 009181 293 QELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFV-- 370 (541)
Q Consensus 293 ~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~~~~~-- 370 (541)
+ +-.-.|..++.|-..- |+. .++|+...| .+....+|. .+|.|..++++|+..+-+.+-.
T Consensus 169 P----~~~~~~~vlVaDmSSn-----flS------rpvDvsk~g--vi~aGAQKN-~G~aG~Tvvivr~dllg~~~~~tP 230 (370)
T KOG2790|consen 169 P----VNDPKGAVLVADMSSN-----FLS------RPVDVSKFG--VIFAGAQKN-VGPAGVTVVIVRKDLLGNALDITP 230 (370)
T ss_pred C----CCCCCCceEEEecccc-----hhc------CCccchhcc--eEEeccccc-cCccccEEEEEehhhhcccccCCc
Confidence 3 2234588899998742 211 257766655 466778899 7999998888887654333211
Q ss_pred cccccCCCccCCCcccCCCCCchHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEe-cCCC---eeEEE
Q 009181 371 AVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG-QEGYLENTKAIMEVSESIQKGIKEIPELFII-GRPD---MTIVA 445 (541)
Q Consensus 371 ~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~~~---~~~v~ 445 (541)
...+|..- ....++..+.|-..+..+-..++++- ..|+..+.+...+.++.+.+.|.+..||... .+|. -.-|+
T Consensus 231 ~v~dyk~~-~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~ 309 (370)
T KOG2790|consen 231 SVLDYKIM-DKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVP 309 (370)
T ss_pred cccceeee-ccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcccc
Confidence 11111100 00111222233222444555566553 3468888888899999999999998787654 2222 46788
Q ss_pred EecCCCC-HHHHHHHHHhCC-ceeccCCCCCeEEEEecCCCH-HHHHHHHHHHHHHHH
Q 009181 446 FGSDVVD-IFEVNDIMSSKG-WHLNPLQRPNSIHICVTLQHV-AVVDVFLRDLRESVE 500 (541)
Q Consensus 446 f~~~~~~-~~~l~~~l~~~G-~~~~~~~~~~~iRi~~~~~~~-e~id~~i~~L~~~~~ 500 (541)
|+..+.. -.++-+...+++ ..+.....-+.+|-|+-..-+ ++++++++-+++..+
T Consensus 310 Fri~~d~Le~eFLkeA~~~~mv~LKGhRSVGGiRASlYNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 310 FRIEKDELEAEFLKEAAKEHMVQLKGHRSVGGIRASLYNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred eeecchHHHHHHHHHHHHhhhhccccccccccchhhhhccccHHHHHHHHHHHHHHHH
Confidence 8876421 122333333333 223322223678988754444 999999998888764
No 395
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.89 E-value=0.00056 Score=67.44 Aligned_cols=209 Identities=16% Similarity=0.169 Sum_probs=125.5
Q ss_pred CHHHHHHhhcc-----Cc-eEEEeecCCCCCc----cccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCC
Q 009181 262 DVKAIKKYINR-----NT-VLIVGSAPGFPHG----IIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (541)
Q Consensus 262 d~~~Le~~i~~-----~t-~~vv~~~~~~~~G----~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~ 331 (541)
.++++|+.|.+ +| ..+++......-| .-+=+..|.++++||++-++||+++-|.-. .|. -+.
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGa-----TGk---~Wa 325 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGA-----TGK---FWA 325 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCc-----cCc---eee
Confidence 35667777742 23 4566665555444 334489999999999999999999855421 121 111
Q ss_pred cC----CCCceEEEeCCCCCCCCCCCceEEEEecccccc-cccccccccCCCccCCCcccCCCCCchHHHHHHHHHHHhH
Q 009181 332 FS----VQGVTSISVDVHKYGLAPKGTSVVLYRNREIRK-HQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ 406 (541)
Q Consensus 332 ~~----~~gvdsis~~~hK~~~~p~g~g~ll~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gsr~~~~~a~~~~al~~lg~ 406 (541)
+. ..-+|.+++| .|+.. .| ++-+++++- ..|.....|.|.. .. ..-+-.+++.+.
T Consensus 326 Hehw~l~~PpD~vTFS-KK~q~----gG--ffh~~~frpn~pYrifNTWmGdP----------~k--~lll~~vv~~I~- 385 (484)
T KOG1405|consen 326 HEHWNLDSPPDVVTFS-KKFQT----GG--FFHDEEFRPNEPYRIFNTWMGDP----------SK--NLLLEEVVQEIK- 385 (484)
T ss_pred ehhcCCCCCccceehh-hhhhc----Cc--cccCcccCCCchHHHhhhhcCCh----------HH--HHHHHHHHHHHh-
Confidence 11 2234777776 24421 22 344444443 3677777776642 11 112223333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcC----CCeEEecCCCeeEEEEecCCCC-HHHHHHHHHhCCceeccCCCCCeEEEEec
Q 009181 407 EGYLENTKAIMEVSESIQKGIKEI----PELFIIGRPDMTIVAFGSDVVD-IFEVNDIMSSKGWHLNPLQRPNSIHICVT 481 (541)
Q Consensus 407 ~g~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~f~~~~~~-~~~l~~~l~~~G~~~~~~~~~~~iRi~~~ 481 (541)
-++++++.....++|.+.|.++ |+.---....+.+++|.+++.. .+.+...++.+|+++..++. .++|+-.+
T Consensus 386 --~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GGCg~-~siRfRPs 462 (484)
T KOG1405|consen 386 --REDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSGSIRDKLILIARLNGVNLGGCGD-KSIRFRPS 462 (484)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCChHHHHHHHHHHHHcCceeccccc-ceeeeccc
Confidence 3455666666777777777653 4422111235778889887654 45788899999999888775 36888666
Q ss_pred CCCH-HHHHHHHHHHHHHHHH
Q 009181 482 LQHV-AVVDVFLRDLRESVET 501 (541)
Q Consensus 482 ~~~~-e~id~~i~~L~~~~~~ 501 (541)
..=+ ...+-+++.+.++++.
T Consensus 463 Lvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 463 LVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred eeehhhhHHHHHHHHHHHhcc
Confidence 4333 6788888888888754
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.31 E-value=0.035 Score=49.80 Aligned_cols=60 Identities=15% Similarity=0.298 Sum_probs=49.6
Q ss_pred ccchHHHHHHHHHHHHHHHHhC--C--CCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc
Q 009181 164 DIFQSVARFEAEVIAMTAALLG--N--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (541)
Q Consensus 164 ~~~~~~~~~e~ev~~~la~l~g--~--~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~ 237 (541)
..+.+..++.+.+.+++.+.+| . ++++ | ++|+|+++++.+++.++.+ +| +.|+++++.|+
T Consensus 89 ~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~----I--vvt~Ga~~al~~l~~~l~d-----pG---D~VlVp~P~Y~ 152 (153)
T PLN02994 89 QDYHGLANFRKAIANFMAEARGGRVKFDADM----I--VLSAGATAANEIIMFCIAD-----PG---DAFLVPTPYYA 152 (153)
T ss_pred CCCCCcHHHHHHHHHHHHHHhCCCCccchhh----e--EEcCCHHHHHHHHHHHHcC-----CC---CEEEEeCCCCC
Confidence 3355778888889999999988 3 3444 7 9999999999999999875 77 99999999886
No 397
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=70.70 E-value=3.5 Score=45.28 Aligned_cols=40 Identities=20% Similarity=0.123 Sum_probs=35.6
Q ss_pred EEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccch
Q 009181 277 IVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFV 316 (541)
Q Consensus 277 vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~ 316 (541)
+..-+|++..|+.++++++++.||+.||-|++|-+++.|-
T Consensus 201 ~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~ 240 (628)
T COG0296 201 TGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFP 240 (628)
T ss_pred ceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCC
Confidence 3455888899999999999999999999999999998663
No 398
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=66.77 E-value=65 Score=33.01 Aligned_cols=101 Identities=15% Similarity=0.116 Sum_probs=57.6
Q ss_pred ceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc------hHHHHHhhcCCeEEEeeCCCCCccCHHHHHHh
Q 009181 196 CGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS------AYDKAAQYFNIKLWRVPVDKEFRADVKAIKKY 269 (541)
Q Consensus 196 ~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~------s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~ 269 (541)
|.+-.|||-.|..++..+... -|.+ +-.+.-++.+. ...+.++.+|+....+.++ .+.+.+.
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~-----~gl~-~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~d------~~~~~~l 129 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKK-----LGLN-PLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITIN------PETFRKL 129 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHH-----hCCc-eEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeCC------HHHHHHH
Confidence 558899999998887555332 2321 22222222222 2566677789988888764 3333332
Q ss_pred hccCceEEEeecCCCCCccc--cCHHHHHHHHHHcCCEEEEeCCcc
Q 009181 270 INRNTVLIVGSAPGFPHGII--DPIQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 270 i~~~t~~vv~~~~~~~~G~i--d~i~~I~~la~~~~i~lhvD~a~g 313 (541)
...... ...+|.... .....+.++|+++|+.+++.|..+
T Consensus 130 ~~~~~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~~~ 170 (343)
T TIGR03573 130 QRAYFK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGENI 170 (343)
T ss_pred HHHHHh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCCCH
Confidence 221110 111122212 235688999999999999998853
No 399
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=65.74 E-value=62 Score=32.25 Aligned_cols=133 Identities=14% Similarity=0.106 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCc--cc--hHHHHH
Q 009181 168 SVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSA--HS--AYDKAA 243 (541)
Q Consensus 168 ~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~--h~--s~~ka~ 243 (541)
.++++|. .+.+-+--..+ . ++|.||.+||.....++... +.|.+ ...++.... +. ...--.
T Consensus 48 K~RKLef----ll~eal~~g~d-----T--lvT~GgiQSNh~r~tAavA~---~lGl~-~v~ile~~~~~y~~ngn~Ll~ 112 (323)
T COG2515 48 KIRKLEF----LLGEALRKGAD-----T--LVTYGGIQSNHVRQTAAVAA---KLGLK-CVLILENIEANYLLNGNLLLS 112 (323)
T ss_pred HHHHHHH----HHhhhhhcCCc-----E--EEEecccchhHHHHHHHHHH---hcCCc-EEEEEeccccccccccchhhh
Confidence 4678887 44333322222 2 79999999999977776432 24432 233332222 11 122334
Q ss_pred hhcCCeEEEeeCCCCC--ccCHHHHHHhhcc--CceEEEeecCCCCCcc---ccCHHHHHHHHHH-cCCEEEEeCCcccc
Q 009181 244 QYFNIKLWRVPVDKEF--RADVKAIKKYINR--NTVLIVGSAPGFPHGI---IDPIQELGELALS-HGTCLHVDLCLGGF 315 (541)
Q Consensus 244 ~~~G~~v~~v~~~~~~--~~d~~~Le~~i~~--~t~~vv~~~~~~~~G~---id~i~~I~~la~~-~~i~lhvD~a~gg~ 315 (541)
..+|+.++.++...+. ....+.+.+-+.. +.-.++...+.+|.|. +.-..||.+-+++ ..+-.+|.++-++.
T Consensus 113 ~l~G~~~~~~~~~~d~~~~~~~~~~~e~~~~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~fD~vVva~gs~g 192 (323)
T COG2515 113 KLMGAEVRAVDAGTDIGINASAEELAEEVRKQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQLLKFDSVVVAPGSGG 192 (323)
T ss_pred hhcCceEEEecCCCChhhchhhHHHHHHHHhcCCCCcEeccCCcCccccccHHHHHHHHHHHHhhccCCCEEEEeCCCcc
Confidence 6679999999876665 4455666665554 3446666666888554 5566788888887 45556666665544
No 400
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=61.48 E-value=13 Score=33.54 Aligned_cols=47 Identities=28% Similarity=0.364 Sum_probs=38.6
Q ss_pred CHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcC--CEEEEeCCcc
Q 009181 262 DVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHG--TCLHVDLCLG 313 (541)
Q Consensus 262 d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~--i~lhvD~a~g 313 (541)
|.++|+++++.+..++++- +|.+.+++++.++.++.| +.+|||-.-|
T Consensus 12 ~~~~le~~les~~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~G 60 (181)
T COG1954 12 DNKDLEKALESESQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEG 60 (181)
T ss_pred hHHHHHHHhcCCCeEEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcc
Confidence 6788999999886655543 577899999999999986 7899998865
No 401
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=59.97 E-value=95 Score=30.39 Aligned_cols=66 Identities=12% Similarity=0.186 Sum_probs=42.1
Q ss_pred ccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHH---hhccC-ceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEE
Q 009181 235 AHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKK---YINRN-TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHV 308 (541)
Q Consensus 235 ~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~---~i~~~-t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhv 308 (541)
.|.+|...++.+|+++..+.. ++....+.+|.+ .|+++ ..+|+.. ++.+. +.+..++++.|+.++.
T Consensus 176 ~H~af~Y~~~~ygl~~~~~~~-~~~eps~~~l~~l~~~ik~~~v~~if~e-~~~~~------~~~~~la~~~g~~v~~ 245 (266)
T cd01018 176 YHPAWGYFARDYGLTQIPIEE-EGKEPSPADLKRLIDLAKEKGVRVVFVQ-PQFST------KSAEAIAREIGAKVVT 245 (266)
T ss_pred ECchhHHHHHHcCCEEEecCC-CCCCCCHHHHHHHHHHHHHcCCCEEEEc-CCCCc------HHHHHHHHHcCCeEEE
Confidence 799999999999999876632 344555555544 45544 4555444 44433 3344778888887654
No 402
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=59.73 E-value=20 Score=33.26 Aligned_cols=39 Identities=21% Similarity=0.128 Sum_probs=33.8
Q ss_pred CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCC
Q 009181 273 NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 273 ~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a 311 (541)
+-.+|++|-++|..|.++|.+.-+++++++|+.+|.=+.
T Consensus 112 ~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIgi 150 (191)
T cd01455 112 EAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIFI 150 (191)
T ss_pred CcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEEe
Confidence 357899999999999999999889999999999886554
No 403
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=59.62 E-value=31 Score=34.45 Aligned_cols=80 Identities=11% Similarity=0.121 Sum_probs=51.6
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCC-CccCHHHHHHhhccCce-
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKE-FRADVKAIKKYINRNTV- 275 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~-~~~d~~~Le~~i~~~t~- 275 (541)
+=.++|..++-+|+.++. +|.+ -.+++|+..-....+..+.+|++++.+|..++ ..--.+.+++...+.+-
T Consensus 66 VE~TSGNTGI~LA~vaa~------~Gy~-~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~~~p~~ 138 (300)
T COG0031 66 VEATSGNTGIALAMVAAA------KGYR-LIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAAEIPGY 138 (300)
T ss_pred EEcCCChHHHHHHHHHHH------cCCc-EEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHHhCCCc
Confidence 456778888888888875 4421 34677777677778889999999999998443 22233444445555544
Q ss_pred EEEeecCCC
Q 009181 276 LIVGSAPGF 284 (541)
Q Consensus 276 ~vv~~~~~~ 284 (541)
++....-.|
T Consensus 139 ~~~~~Qf~N 147 (300)
T COG0031 139 AVWLNQFEN 147 (300)
T ss_pred eEchhhcCC
Confidence 555533333
No 404
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=56.91 E-value=92 Score=31.12 Aligned_cols=98 Identities=17% Similarity=0.191 Sum_probs=67.0
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch-----HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-----YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR 272 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s-----~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~ 272 (541)
++|.+-|.+....+..+++ +|.+ =+|++.+ ++|. ..+..+.+|+.+..|+- .++-..+++
T Consensus 123 IlTh~~S~~v~~~l~~A~~-----~~k~-~~V~VtE-SRP~~eG~~~ak~L~~~gI~~~~I~D--------sa~~~~~~~ 187 (301)
T COG1184 123 ILTHSFSKTVLEVLKTAAD-----RGKR-FKVIVTE-SRPRGEGRIMAKELRQSGIPVTVIVD--------SAVGAFMSR 187 (301)
T ss_pred EEEecCcHHHHHHHHHhhh-----cCCc-eEEEEEc-CCCcchHHHHHHHHHHcCCceEEEec--------hHHHHHHHh
Confidence 8999999999999998876 3311 2566655 3443 44555666888877762 334445555
Q ss_pred CceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeC
Q 009181 273 NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDL 310 (541)
Q Consensus 273 ~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~ 310 (541)
-.+++++...-...|.+-+ --.|+..||+.+.|+.|=+
T Consensus 188 vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~a 228 (301)
T COG1184 188 VDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVVA 228 (301)
T ss_pred CCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEEe
Confidence 5677777777766776655 4578999999999987643
No 405
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=56.48 E-value=1.4e+02 Score=28.85 Aligned_cols=130 Identities=15% Similarity=0.178 Sum_probs=65.5
Q ss_pred CCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHh-hcCCCCCeEEecCCccc
Q 009181 159 NPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRN-KRGITRPEMIIPVSAHS 237 (541)
Q Consensus 159 n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~-~~Gi~~~~vi~~~~~h~ 237 (541)
||+-|-.......+-..+.+.++++ ++.+ ...+... .+....-+..+..+... ...+....+++ .|+
T Consensus 91 npH~Wldp~~~~~~~~~Ia~~L~~~---~P~~-----~~~y~~N-~~~~~~~L~~l~~~~~~~~~~~~~~~~v~---~h~ 158 (256)
T PF01297_consen 91 NPHVWLDPENAKKMAEAIADALSEL---DPAN-----KDYYEKN-AEKYLKELDELDAEIKEKLAKLPGRPVVV---YHD 158 (256)
T ss_dssp ESTGGGSHHHHHHHHHHHHHHHHHH---TGGG-----HHHHHHH-HHHHHHHHHHHHHHHHHHHTTSSGGEEEE---EES
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHh---Cccc-----hHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCCeEEE---ECh
Confidence 5555544445566666666666666 3433 1122222 22222222222222221 12222233444 699
Q ss_pred hHHHHHhhcCCeEEEee-CCCCCccCHHHHHHhh---ccC-ceEEEeecCCCCCccccCHHHHHHHHHHcCCEEE
Q 009181 238 AYDKAAQYFNIKLWRVP-VDKEFRADVKAIKKYI---NRN-TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH 307 (541)
Q Consensus 238 s~~ka~~~~G~~v~~v~-~~~~~~~d~~~Le~~i---~~~-t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lh 307 (541)
++...++.+|+++..+- ..++....+.+|.+.+ +++ ..+|+.. ++.+. +.+..++++.|+.++
T Consensus 159 ~~~Y~~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~i~~e-~~~~~------~~~~~la~~~g~~vv 226 (256)
T PF01297_consen 159 AFQYFAKRYGLKVIGVIEISPGEEPSPKDLAELIKLIKENKVKCIFTE-PQFSS------KLAEALAKETGVKVV 226 (256)
T ss_dssp TTHHHHHHTT-EEEEEESSSSSSSS-HHHHHHHHHHHHHTT-SEEEEE-TTS-T------HHHHHHHHCCT-EEE
T ss_pred HHHHHHHhcCCceeeeeccccccCCCHHHHHHHHHHhhhcCCcEEEec-CCCCh------HHHHHHHHHcCCcEE
Confidence 99999999999888776 3445566777666655 444 4454443 33322 345556778887764
No 406
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=56.14 E-value=1e+02 Score=29.30 Aligned_cols=97 Identities=20% Similarity=0.210 Sum_probs=64.0
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeE--EecCCc---------cchHHHHHhhcCCeEEEeeCCCCCccCHHHH
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEM--IIPVSA---------HSAYDKAAQYFNIKLWRVPVDKEFRADVKAI 266 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~v--i~~~~~---------h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~L 266 (541)
.+.|||..|+..+..+.+ .|..-..+ +.|+.. +-.....++.+|+.+....++....-..++|
T Consensus 5 aL~SGGKDS~~Al~~a~~------~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L 78 (223)
T COG2102 5 ALYSGGKDSFYALYLALE------EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEEL 78 (223)
T ss_pred EEEecCcHHHHHHHHHHH------cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHH
Confidence 688999999888777775 44211111 222222 2235667788899999988876555678888
Q ss_pred HHhhcc-CceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEE
Q 009181 267 KKYINR-NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLH 307 (541)
Q Consensus 267 e~~i~~-~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lh 307 (541)
.+++.. +.-.|+ +|.+.. ...+-.+|++.|+-+.
T Consensus 79 ~~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 79 KEALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 888875 222332 577754 6789999999887654
No 407
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=54.47 E-value=1e+02 Score=31.93 Aligned_cols=83 Identities=14% Similarity=0.116 Sum_probs=52.1
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEE
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLI 277 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~v 277 (541)
+-.++|..+..+|..+.+ .|++ ..|++++..-..-...++.+|++++.++...+..-..+..++...+++-.+
T Consensus 115 V~aSsGN~G~alA~~a~~------~G~~-~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~~~~~~~~a~~l~~~~~~~~ 187 (368)
T PLN02556 115 IEPTSGNMGISLAFMAAM------KGYK-MILTMPSYTSLERRVTMRAFGAELVLTDPTKGMGGTVKKAYELLESTPDAF 187 (368)
T ss_pred EEeCCchHHHHHHHHHHH------cCCC-EEEEECCCCCHHHHHHHHHcCCEEEEECCCCCccHHHHHHHHHHHhcCCCC
Confidence 557778888888887754 4543 467788776677788889999999998743221123344444444454444
Q ss_pred EeecCCCCCc
Q 009181 278 VGSAPGFPHG 287 (541)
Q Consensus 278 v~~~~~~~~G 287 (541)
.+...+||.+
T Consensus 188 ~~~q~~np~~ 197 (368)
T PLN02556 188 MLQQFSNPAN 197 (368)
T ss_pred ccCCCCCHHH
Confidence 4444445443
No 408
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=53.44 E-value=19 Score=31.09 Aligned_cols=41 Identities=24% Similarity=0.143 Sum_probs=25.8
Q ss_pred HHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeC
Q 009181 264 KAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDL 310 (541)
Q Consensus 264 ~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~ 310 (541)
+.+++.+..++-+++++.+. .+-+++.++|++++++|..=.
T Consensus 72 ~~l~~l~~~~~P~iIvt~~~------~~p~~l~e~a~~~~ipll~t~ 112 (127)
T PF02603_consen 72 ERLEKLFSYNPPCIIVTRGL------EPPPELIELAEKYNIPLLRTP 112 (127)
T ss_dssp CHHHHHCTTT-S-EEEETTT---------HHHHHHHHHCT--EEEES
T ss_pred HHHHHHhCCCCCEEEEECcC------CCCHHHHHHHHHhCCcEEEcC
Confidence 34455556688888888875 578999999999999987543
No 409
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=53.28 E-value=1.4e+02 Score=29.24 Aligned_cols=69 Identities=12% Similarity=0.136 Sum_probs=43.0
Q ss_pred ccchHHHHHhhcCCeEEEee----CC-CCCccCHHHHHHhh---ccC-ceEEEeecCCCCCccccCHHHHHHHHHHcCCE
Q 009181 235 AHSAYDKAAQYFNIKLWRVP----VD-KEFRADVKAIKKYI---NRN-TVLIVGSAPGFPHGIIDPIQELGELALSHGTC 305 (541)
Q Consensus 235 ~h~s~~ka~~~~G~~v~~v~----~~-~~~~~d~~~Le~~i---~~~-t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~ 305 (541)
.|++|...++.+|++.+.+. .. ++....+.+|.+.+ .++ ..+|+ ..++.+. ...+.|.+++++.|+.
T Consensus 159 ~H~af~Y~~~~yGl~~~~~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if-~e~~~~~---k~~~~l~~la~~~~~~ 234 (264)
T cd01020 159 TEPVFDYLLDALGMKERTPKGYTATTESETEPSPADIAAFQNAIKNRQIDALI-VNPQQAS---SATTNITGLAKRSGVP 234 (264)
T ss_pred eCchHHHHHHHCCCcccCHHHHHhhhcCCCCCCHHHHHHHHHHHHhCCCCEEE-eCCCCCc---HHHHHHHHHHHHcCCC
Confidence 69999999999999876432 11 24556665555554 444 44444 4443322 2345566788998887
Q ss_pred EE
Q 009181 306 LH 307 (541)
Q Consensus 306 lh 307 (541)
+.
T Consensus 235 v~ 236 (264)
T cd01020 235 VV 236 (264)
T ss_pred EE
Confidence 64
No 410
>PLN03013 cysteine synthase
Probab=52.38 E-value=52 Score=34.76 Aligned_cols=81 Identities=16% Similarity=0.139 Sum_probs=52.5
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEE
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLI 277 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~v 277 (541)
+-.++|..++-+|+.+.. .|++ -.|++|+.........++.+|++++.++.+.+..-..+..++...+++-.+
T Consensus 179 VeaSSGN~G~ALA~~a~~------~G~~-~~VvvP~~~s~~K~~~ira~GAeVi~v~~~~~~~~a~~~A~ela~~~~g~~ 251 (429)
T PLN03013 179 VEPTSGNTGIGLAFIAAS------RGYR-LILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAY 251 (429)
T ss_pred EEECCcHHHHHHHHHHHH------cCCC-EEEEECCCCcHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhhcCCeE
Confidence 567788888888887765 4542 467889888888889999999999998754322112344444444443344
Q ss_pred EeecCCCC
Q 009181 278 VGSAPGFP 285 (541)
Q Consensus 278 v~~~~~~~ 285 (541)
++..-+||
T Consensus 252 ~~~qy~Np 259 (429)
T PLN03013 252 MLQQFDNP 259 (429)
T ss_pred eCCCCCCH
Confidence 44333343
No 411
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=51.57 E-value=81 Score=29.83 Aligned_cols=73 Identities=12% Similarity=0.122 Sum_probs=45.6
Q ss_pred EecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEE
Q 009181 230 IIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHV 308 (541)
Q Consensus 230 i~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhv 308 (541)
.+.........+..+..|++++..+.+ |.+.|.++++.-..+++.+.+.+ ....+--..+.+.|++.|+..++
T Consensus 27 ~l~R~~~~~~~~~l~~~g~~vv~~d~~-----~~~~l~~al~g~d~v~~~~~~~~-~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 27 ALVRDPSSDRAQQLQALGAEVVEADYD-----DPESLVAALKGVDAVFSVTPPSH-PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp EEESSSHHHHHHHHHHTTTEEEES-TT------HHHHHHHHTTCSEEEEESSCSC-CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred EEEeccchhhhhhhhcccceEeecccC-----CHHHHHHHHcCCceEEeecCcch-hhhhhhhhhHHHhhhccccceEE
Confidence 334434333445556679988776665 89999999997555555554443 33344466899999998876665
No 412
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=48.29 E-value=73 Score=28.06 Aligned_cols=75 Identities=15% Similarity=0.175 Sum_probs=52.2
Q ss_pred CCeEEecCCc---cch----HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHH
Q 009181 226 RPEMIIPVSA---HSA----YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGEL 298 (541)
Q Consensus 226 ~~~vi~~~~~---h~s----~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~l 298 (541)
+|+|++-... |.- ...+.+-.|++++..+...+ --+.+.++++++.-.|.+|.-+ -|-.+..+++.+.
T Consensus 12 rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~t---p~e~v~aA~~~dv~vIgvSsl~--g~h~~l~~~lve~ 86 (143)
T COG2185 12 RPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQT---PEEAVRAAVEEDVDVIGVSSLD--GGHLTLVPGLVEA 86 (143)
T ss_pred CceEEEeccCccccccchHHHHHHHHhCCceEEecCCcCC---HHHHHHHHHhcCCCEEEEEecc--chHHHHHHHHHHH
Confidence 3778776554 433 45556666999998776432 3566777888887777777653 3556778999999
Q ss_pred HHHcCCE
Q 009181 299 ALSHGTC 305 (541)
Q Consensus 299 a~~~~i~ 305 (541)
++++|.-
T Consensus 87 lre~G~~ 93 (143)
T COG2185 87 LREAGVE 93 (143)
T ss_pred HHHhCCc
Confidence 9999753
No 413
>smart00642 Aamy Alpha-amylase domain.
Probab=47.23 E-value=17 Score=32.89 Aligned_cols=28 Identities=21% Similarity=0.405 Sum_probs=26.0
Q ss_pred CCccccCHHHHHHHHHHcCCEEEEeCCc
Q 009181 285 PHGIIDPIQELGELALSHGTCLHVDLCL 312 (541)
Q Consensus 285 ~~G~id~i~~I~~la~~~~i~lhvD~a~ 312 (541)
..|+.++++++++.||++|+.+++|-+.
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4688999999999999999999999995
No 414
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=46.66 E-value=1.3e+02 Score=29.95 Aligned_cols=52 Identities=17% Similarity=0.282 Sum_probs=40.7
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~ 256 (541)
+-.|+|..+..+|..+.+ .|++ -.|++|+.....-...++.+|++++.++.+
T Consensus 63 v~aSsGN~g~alA~~a~~------~G~~-~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~ 114 (290)
T TIGR01138 63 IEATSGNTGIALAMIAAL------KGYR-MKLLMPDNMSQERKAAMRAYGAELILVTKE 114 (290)
T ss_pred EEECCChHHHHHHHHHHH------cCCe-EEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 667778888888887764 4542 468888887788888999999999999754
No 415
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=45.62 E-value=3.3e+02 Score=27.28 Aligned_cols=100 Identities=19% Similarity=0.236 Sum_probs=64.3
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch--HHHHHh--hcCCeEEEeeCCCCCccCHHHHHHhhccC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YDKAAQ--YFNIKLWRVPVDKEFRADVKAIKKYINRN 273 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s--~~ka~~--~~G~~v~~v~~~~~~~~d~~~Le~~i~~~ 273 (541)
++|.|.+......++.++++ | ++=+|++.+.+-.. ...+.. ..|++...|| | .++-+.+.+-
T Consensus 166 iLT~g~SrTV~~FL~~A~kk-----~-Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~-------d-aaVfA~MsrV 231 (353)
T KOG1465|consen 166 ILTLGSSRTVENFLKHAAKK-----G-RKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP-------D-AAVFAMMSRV 231 (353)
T ss_pred EEecCccHHHHHHHHHHHhc-----c-CceEEEEeecCCcccchHhhHHHHHcCCeeEEec-------c-HHHHHHhhhc
Confidence 89999999999999888753 2 12356665543221 222222 4477766665 2 3444555555
Q ss_pred ceEEEeecCCCCCcccc-C--HHHHHHHHHHcCCEEEEeCC
Q 009181 274 TVLIVGSAPGFPHGIID-P--IQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 274 t~~vv~~~~~~~~G~id-~--i~~I~~la~~~~i~lhvD~a 311 (541)
-++|++++.-.+.|.+- + ...++..|++|-++++|=+-
T Consensus 232 nKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp 272 (353)
T KOG1465|consen 232 NKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAP 272 (353)
T ss_pred ceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecc
Confidence 66777777666666542 2 67889999999999998554
No 416
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=44.42 E-value=1.5e+02 Score=26.73 Aligned_cols=78 Identities=15% Similarity=0.016 Sum_probs=52.8
Q ss_pred eEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEE
Q 009181 228 EMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH 307 (541)
Q Consensus 228 ~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lh 307 (541)
+++....++..+..++...|++++...-+-+-.|-++.|+-+-+++.-.+++..+.. |+..|++..+++|..++
T Consensus 60 R~Y~~a~a~~~l~~~l~~~Gf~pv~~kG~~Dv~laIDame~~~~~~iD~~vLvSgD~------DF~~Lv~~lre~G~~V~ 133 (160)
T TIGR00288 60 KVLLNQYASDKLIEAVVNQGFEPIIVAGDVDVRMAVEAMELIYNPNIDAVALVTRDA------DFLPVINKAKENGKETI 133 (160)
T ss_pred EEEechhccHHHHHHHHHCCceEEEecCcccHHHHHHHHHHhccCCCCEEEEEeccH------hHHHHHHHHHHCCCEEE
Confidence 456665666678888888899877543322334556666665556555555555543 78889999999999998
Q ss_pred EeCC
Q 009181 308 VDLC 311 (541)
Q Consensus 308 vD~a 311 (541)
+=+.
T Consensus 134 v~g~ 137 (160)
T TIGR00288 134 VIGA 137 (160)
T ss_pred EEeC
Confidence 8665
No 417
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=44.24 E-value=3.2e+02 Score=26.85 Aligned_cols=67 Identities=18% Similarity=0.245 Sum_probs=41.9
Q ss_pred CccchHHHHHhhcCCeEEEee-CCCCCccCHHHHHHhh---ccC-ceEEEeecCCCCCccccCHHHHHHHHHHcCCEEE
Q 009181 234 SAHSAYDKAAQYFNIKLWRVP-VDKEFRADVKAIKKYI---NRN-TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH 307 (541)
Q Consensus 234 ~~h~s~~ka~~~~G~~v~~v~-~~~~~~~d~~~Le~~i---~~~-t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lh 307 (541)
..|++|...++.+|+++..+. ..++....+.+|.+.+ +++ ..+|+ ..++.+. +.+..++++.|+.+.
T Consensus 176 ~~H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if-~e~~~~~------~~~~~la~~~g~~v~ 247 (282)
T cd01017 176 TQHAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIF-FEENASS------KIAETLAKETGAKLL 247 (282)
T ss_pred EecccHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEE-EeCCCCh------HHHHHHHHHcCCcEE
Confidence 369999999999999987653 2334456666665554 444 44444 4444332 344557778887654
No 418
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=44.14 E-value=3.3e+02 Score=26.95 Aligned_cols=65 Identities=12% Similarity=0.174 Sum_probs=42.9
Q ss_pred ccchHHHHHhhcCCeEEEee-CCCCCccCHHHHHHhh---cc-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEE
Q 009181 235 AHSAYDKAAQYFNIKLWRVP-VDKEFRADVKAIKKYI---NR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCL 306 (541)
Q Consensus 235 ~h~s~~ka~~~~G~~v~~v~-~~~~~~~d~~~Le~~i---~~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~l 306 (541)
.|++|...++.+|+++..+. ..++....+.+|.+.+ ++ +..+|+... +.+. +.+..++++.|+.+
T Consensus 183 ~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~-~~~~------~~~~~ia~~~gv~v 252 (287)
T cd01137 183 SEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVES-TVND------RLMKQVAKETGAKI 252 (287)
T ss_pred ecccHHHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeC-CCCh------HHHHHHHHHhCCcc
Confidence 69999999999999987643 3345556776666655 43 455555443 3322 45667788888765
No 419
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=43.78 E-value=1e+02 Score=29.41 Aligned_cols=65 Identities=17% Similarity=0.119 Sum_probs=46.2
Q ss_pred HHHHHhhcCCeEEEe-eCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEE
Q 009181 239 YDKAAQYFNIKLWRV-PVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHV 308 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v-~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhv 308 (541)
+.++++.+|.++..+ +...+..--.+.+++++..++-.|++..... .....+.+-|++.|++++.
T Consensus 20 ~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~-----~~~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 20 AKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDP-----DSLAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSST-----TTTHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCH-----HHHHHHHHHHhhcCceEEE
Confidence 456677789988886 5544445556778888888888877665543 2355667778899998875
No 420
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=43.25 E-value=1.7e+02 Score=29.17 Aligned_cols=52 Identities=19% Similarity=0.245 Sum_probs=40.7
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~ 256 (541)
+-.|+|..+..+|..+.+ .|++ -.|++|+.....-....+.+|++++.++-+
T Consensus 61 v~aSsGN~g~alA~~a~~------~Gl~-~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 61 VEPTSGNTGIALAMVAAA------RGYK-LILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred EEeCCChhHHHHHHHHHH------cCCe-EEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 567778888888887765 4542 568899888788888899999999998753
No 421
>PRK14994 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional
Probab=42.64 E-value=1.3e+02 Score=29.94 Aligned_cols=78 Identities=14% Similarity=0.058 Sum_probs=52.0
Q ss_pred CeEEecCCccchHHHHHhhcCCeEEEeeCCC-CCccCHHHHHHhhccCceEEEee-cCCCCCccccCHHHHHHHHHHcCC
Q 009181 227 PEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGS-APGFPHGIIDPIQELGELALSHGT 304 (541)
Q Consensus 227 ~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~-~~~~~~G~id~i~~I~~la~~~~i 304 (541)
|.|+++++-+. .+..+.++++...+.+.+ ++.-..+.+.+.+.+.-.++++| +|+ -+..||-..+.+.|++.|+
T Consensus 39 DvI~~edtr~t--~~ll~~~~i~~~~~~~~~~~~~~~~~~i~~~l~~G~~ValvSdaGd--P~I~dpg~~Lv~~~~~~gi 114 (287)
T PRK14994 39 DLIAAEDTRHT--GLLLQHFAINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGT--PLINDPGYHLVRTCREAGI 114 (287)
T ss_pred CEEEEeCCcch--HHHHhhcCCCCEEEEccCCCHHHHHHHHHHHHHCCCeEEEEccCCC--CceeCCHHHHHHHHHHCCC
Confidence 67777776665 446677777655566543 44334455555555555556665 664 4788999999999999988
Q ss_pred EEEE
Q 009181 305 CLHV 308 (541)
Q Consensus 305 ~lhv 308 (541)
.+.+
T Consensus 115 ~v~v 118 (287)
T PRK14994 115 RVVP 118 (287)
T ss_pred CEEE
Confidence 7653
No 422
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=41.53 E-value=1.9e+02 Score=24.27 Aligned_cols=60 Identities=12% Similarity=-0.053 Sum_probs=38.8
Q ss_pred cCCeEEEeeCCC-CCccCHHHHHHhhccCceEEEeecCC--CCCccccCHHHHHHHHHHcCCEEEE
Q 009181 246 FNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPG--FPHGIIDPIQELGELALSHGTCLHV 308 (541)
Q Consensus 246 ~G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~~--~~~G~id~i~~I~~la~~~~i~lhv 308 (541)
.|+.+..|+..+ +|. .++.+.|....+-+++..++ ...+...|...|...|-++++++..
T Consensus 44 ~Gi~v~~vk~~~~~g~---~~i~~~i~~g~i~~VInt~~~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 44 TGLTVNRMKSGPLGGD---QQIGALIAEGEIDAVIFFRDPLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hCCcEEEEecCCCCch---hHHHHHHHcCceeEEEEcCCCCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 477777775432 343 34556666665555555554 3333366788999999999999874
No 423
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=40.92 E-value=1.9e+02 Score=27.58 Aligned_cols=95 Identities=18% Similarity=0.249 Sum_probs=59.9
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEE---ecCC-----cc----chHHHHHhhcCCeEEEeeCCCCCccCHHH
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMI---IPVS-----AH----SAYDKAAQYFNIKLWRVPVDKEFRADVKA 265 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi---~~~~-----~h----~s~~ka~~~~G~~v~~v~~~~~~~~d~~~ 265 (541)
+.-|||-.++....++..+ .. ...+ ++.. .| .-....++.+|+.++.++.+....--.++
T Consensus 5 ~l~SGGKDS~~al~~a~~~-~~-------v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~~e~~~e~ 76 (223)
T TIGR00290 5 ALISGGKDSCLALYHALKE-HE-------VISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGTEEDEVEE 76 (223)
T ss_pred EEecCcHHHHHHHHHHHHh-Ce-------eEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCCccHHHHH
Confidence 6789999999998888764 21 1111 2221 12 33667888999998887765433345566
Q ss_pred HHHhhcc-CceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEE
Q 009181 266 IKKYINR-NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLH 307 (541)
Q Consensus 266 Le~~i~~-~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lh 307 (541)
|++++.+ ..-.++ +|.++. -..+-.+|.+.|+..+
T Consensus 77 l~~~l~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 77 LKGILHTLDVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHHHHHHcCCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 7666654 222222 677754 4578888888887654
No 424
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=40.85 E-value=62 Score=26.97 Aligned_cols=52 Identities=12% Similarity=0.167 Sum_probs=42.4
Q ss_pred CCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCC
Q 009181 258 EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 258 ~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a 311 (541)
+.+++++++++.+.++|-.+++-.+. +|.+.-.++..+++++.++-+++--.
T Consensus 46 SHkl~~eEle~~lee~~E~ivvGTG~--~G~l~l~~ea~e~~r~k~~~vi~~pT 97 (121)
T COG1504 46 SHKLALEELEELLEEGPEVIVVGTGQ--SGMLELSEEAREFFRKKGCEVIELPT 97 (121)
T ss_pred ccccCHHHHHHHHhcCCcEEEEecCc--eeEEEeCHHHHHHHHhcCCeEEEeCC
Confidence 35799999999999998776665554 79998899999999999987776544
No 425
>PLN02565 cysteine synthase
Probab=40.77 E-value=92 Score=31.56 Aligned_cols=51 Identities=18% Similarity=0.135 Sum_probs=39.9
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~ 255 (541)
+-.|+|..+.-+|+.+.+ .|++ -.|++|+.+-..-...++.+|++++.++.
T Consensus 71 v~aSsGN~g~alA~~a~~------~G~~-~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 71 IEPTSGNTGIGLAFMAAA------KGYK-LIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred EEECCChHHHHHHHHHHH------cCCe-EEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 556788888888887764 4432 45788988888888999999999998764
No 426
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=39.69 E-value=73 Score=33.08 Aligned_cols=81 Identities=20% Similarity=0.210 Sum_probs=53.8
Q ss_pred EEecCCccchHHHHHhhc-CCeEEEeeCCCCCc-cCHHHHHHhhcc---CceEEEeecCCCCCccccCHHHHHHHHHHcC
Q 009181 229 MIIPVSAHSAYDKAAQYF-NIKLWRVPVDKEFR-ADVKAIKKYINR---NTVLIVGSAPGFPHGIIDPIQELGELALSHG 303 (541)
Q Consensus 229 vi~~~~~h~s~~ka~~~~-G~~v~~v~~~~~~~-~d~~~Le~~i~~---~t~~vv~~~~~~~~G~id~i~~I~~la~~~~ 303 (541)
-++....|+...|.--+. +-++.+++.++.+. .+.+.|.+.+.. +..+++++-- .-|...+.+++.++|++.|
T Consensus 94 ~l~~~~~r~T~~K~Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY--~KG~L~~~q~~I~~ar~~~ 171 (467)
T COG2870 94 DLLRDKNRPTIVKLRVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALVLSDY--AKGVLTNVQKMIDLAREAG 171 (467)
T ss_pred ceEeecCCCceeeeeeecccceEEEecccccCcchhHHHHHHHHHHHhhcCCEEEEecc--ccccchhHHHHHHHHHHcC
Confidence 345556677665543222 34677777665333 445555555543 3456666653 4799999999999999999
Q ss_pred CEEEEeCC
Q 009181 304 TCLHVDLC 311 (541)
Q Consensus 304 i~lhvD~a 311 (541)
+++.+|-=
T Consensus 172 ~pVLvDPK 179 (467)
T COG2870 172 IPVLVDPK 179 (467)
T ss_pred CcEEECCC
Confidence 99999954
No 427
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=39.61 E-value=1.1e+02 Score=30.15 Aligned_cols=101 Identities=16% Similarity=0.125 Sum_probs=55.5
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccch----HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc-
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR- 272 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s----~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~- 272 (541)
++|.|-+..+..++..+.. .| ++-+|++.+..... +.+.....|+.+..++-. .+-..+..
T Consensus 111 ILT~~~S~~v~~~l~~a~~-----~~-~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i~d~--------~~~~~m~~~ 176 (282)
T PF01008_consen 111 ILTHGYSSTVERFLLSAKK-----KG-KKFRVIVLESRPYNEGRLMAKELAEAGIPVTLIPDS--------AVGYVMPRD 176 (282)
T ss_dssp EEEES--SHHHHHHHHHHH-----TT-EEEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE-GG--------GHHHHHHCT
T ss_pred EEEeCCchHHHHHHHHHHH-----cC-CeEEEEEccCCcchhhhhHHHHhhhcceeEEEEech--------HHHHHHHHh
Confidence 7888888887777777653 22 01357777654321 333344459999888742 23333444
Q ss_pred CceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCCc
Q 009181 273 NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCL 312 (541)
Q Consensus 273 ~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a~ 312 (541)
-.++++....-...|.+-. -..++-+|++++++++|=+-.
T Consensus 177 vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~~~~ 219 (282)
T PF01008_consen 177 VDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVLAES 219 (282)
T ss_dssp ESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE--G
T ss_pred CCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEEccc
Confidence 3456666655566775543 457888999999999986553
No 428
>PLN00011 cysteine synthase
Probab=38.05 E-value=2.5e+02 Score=28.42 Aligned_cols=51 Identities=14% Similarity=0.147 Sum_probs=39.4
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~ 255 (541)
+..|+|..+..+|..+.. .|++ -.|++|...-......++.+|++++.++-
T Consensus 73 v~aSsGN~g~alA~~a~~------~G~~-~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 73 IEATAGNTGIGLACIGAA------RGYK-VILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred EEeCCChHHHHHHHHHHH------cCCe-EEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 567778888888887765 4542 46788887777788889999999998874
No 429
>PRK11761 cysM cysteine synthase B; Provisional
Probab=38.00 E-value=2.4e+02 Score=28.08 Aligned_cols=51 Identities=22% Similarity=0.326 Sum_probs=40.5
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~ 255 (541)
+..|+|..+..+|..+.. .|++ -.|++|+..-..-...++.+|++++.++.
T Consensus 67 v~aSsGN~g~alA~~a~~------~G~~-~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 67 IEATSGNTGIALAMIAAI------KGYR-MKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred EEeCCChHHHHHHHHHHH------cCCC-EEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 667888888888887764 4542 46788888777888899999999999985
No 430
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=37.56 E-value=2.2e+02 Score=27.22 Aligned_cols=101 Identities=16% Similarity=0.188 Sum_probs=59.8
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCC------CCCeEEecCCccchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhc
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGI------TRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYIN 271 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi------~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~ 271 (541)
+..|||-.|...+.++..+ ... .++ ..+........+.-....|+.+|+.++.+.+.....-..+++.+.+.
T Consensus 5 vl~SGGKDS~lAl~~~~~~-~~V-~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~~e~~~~~l~~~l~ 82 (222)
T TIGR00289 5 VLYSGGKDSILALYKALEE-HEV-ISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGEEEKEVEDLAGQLG 82 (222)
T ss_pred EEecCcHHHHHHHHHHHHc-Cee-EEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCchhHHHHHHHHHHH
Confidence 6789999999998888764 110 000 00111111112234678889999998888765433334556655554
Q ss_pred c-CceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEE
Q 009181 272 R-NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLH 307 (541)
Q Consensus 272 ~-~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lh 307 (541)
+ ..-.|+ +|.++. -..+-.+|.+.|+..+
T Consensus 83 ~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 83 ELDVEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
Confidence 4 222222 677754 4678889998887655
No 431
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=37.50 E-value=20 Score=35.35 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=28.3
Q ss_pred CCCCCccccCHHHHHHHHHHcCCEEEEeCCcc
Q 009181 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 282 ~~~~~G~id~i~~I~~la~~~~i~lhvD~a~g 313 (541)
++...|+.++++++++.||++|+.|++|-+..
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred cccccchhhhhhhhhhccccccceEEEeeecc
Confidence 44457999999999999999999999999864
No 432
>PRK08329 threonine synthase; Validated
Probab=37.43 E-value=3.1e+02 Score=28.00 Aligned_cols=51 Identities=20% Similarity=0.187 Sum_probs=37.9
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~ 255 (541)
+..|+|..+..+|..+++ .|++ -.|++|...-..-...++.+|++++.++-
T Consensus 108 v~aSsGN~g~alA~~aa~------~G~~-~~v~vp~~~~~~k~~~~~~~GA~v~~v~~ 158 (347)
T PRK08329 108 VIDSSGNAALSLALYSLS------EGIK-VHVFVSYNASKEKISLLSRLGAELHFVEG 158 (347)
T ss_pred EEECCCcHHHHHHHHHHH------cCCc-EEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 566677888888877765 4432 46888887666667778899999999874
No 433
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=36.51 E-value=4.3e+02 Score=26.09 Aligned_cols=66 Identities=20% Similarity=0.245 Sum_probs=41.9
Q ss_pred ccchHHHHHhhcCCeEEEee-CCCCCccCHHHHHHhhc---c-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEE
Q 009181 235 AHSAYDKAAQYFNIKLWRVP-VDKEFRADVKAIKKYIN---R-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH 307 (541)
Q Consensus 235 ~h~s~~ka~~~~G~~v~~v~-~~~~~~~d~~~Le~~i~---~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lh 307 (541)
.|++|...++.+|+++..+- ...+....+.+|.+.++ + +..+|+. .++. +-+.+..|+++.|+.+.
T Consensus 185 ~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~-e~~~------~~~~~~~ia~~~g~~v~ 255 (286)
T cd01019 185 FHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFA-EPQF------HPKIAETLAEGTGAKVG 255 (286)
T ss_pred ecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEe-cCCC------ChHHHHHHHHhcCceEE
Confidence 78999999999999876543 33456677777666554 3 4455543 3332 22456666777776543
No 434
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=36.50 E-value=2.4e+02 Score=27.81 Aligned_cols=52 Identities=15% Similarity=0.209 Sum_probs=39.2
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~ 256 (541)
+..++|..+..+|..+.+ .|++ -.|+++......-...++.+|++++.++.+
T Consensus 57 v~~SsGN~g~alA~~a~~------~G~~-~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 57 IEPTSGNTGIGLAMVAAA------KGYR-FIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred EEeCCChHHHHHHHHHHH------cCCe-EEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 556777777777776654 4542 468888887778888899999999998854
No 435
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=36.41 E-value=11 Score=34.56 Aligned_cols=47 Identities=19% Similarity=0.337 Sum_probs=34.7
Q ss_pred CHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcC--CEEEEeCCcc
Q 009181 262 DVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHG--TCLHVDLCLG 313 (541)
Q Consensus 262 d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~--i~lhvD~a~g 313 (541)
+.++++++++.+...|++. +|.+.+++++.+.++++| +.+|+|-+-|
T Consensus 8 ~~~~l~~al~s~~~~vfLl-----~g~I~~l~~~v~~~~~~gK~vfVHiDli~G 56 (175)
T PF04309_consen 8 DEEDLEKALESDVEVVFLL-----TGDIGNLKDIVKRLKAAGKKVFVHIDLIEG 56 (175)
T ss_dssp CCCCCCCCCCSSSSEEEE------SEECCCHHHHHHHHHHTT-EEEEECCGEET
T ss_pred CHHHHHHHHcCCCCEEEEE-----cCcHHHHHHHHHHHHHcCCEEEEEehhcCC
Confidence 3455667777665555443 478899999999999997 6788888854
No 436
>PRK00509 argininosuccinate synthase; Provisional
Probab=36.35 E-value=1.2e+02 Score=31.84 Aligned_cols=103 Identities=19% Similarity=0.196 Sum_probs=60.1
Q ss_pred eEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEec--CCcc----chHHHHHhhcCC-eEEEeeCCCCCccCHHHHHHh
Q 009181 197 GNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIP--VSAH----SAYDKAAQYFNI-KLWRVPVDKEFRADVKAIKKY 269 (541)
Q Consensus 197 G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~--~~~h----~s~~ka~~~~G~-~v~~v~~~~~~~~d~~~Le~~ 269 (541)
.+..|||-.+..++..+... .| .+|+.- .... ....+.|+.+|+ +...+++.+.+ .-+-+..+
T Consensus 6 vva~SGGlDSsvla~~l~e~-----lG---~eViavt~d~Gq~~dle~a~~~A~~lGi~~~~viD~~~ef--~~~~i~~~ 75 (399)
T PRK00509 6 VLAYSGGLDTSVIIKWLKET-----YG---CEVIAFTADVGQGEELEPIREKALKSGASEIYVEDLREEF--VRDYVFPA 75 (399)
T ss_pred EEEEcCCHHHHHHHHHHHHh-----hC---CeEEEEEEecCCHHHHHHHHHHHHHcCCCeEEEEcCHHHH--HHHhHHHH
Confidence 37889998888777665432 14 334221 1111 124566777897 45555654322 11223344
Q ss_pred hccCceEEEeecCCCCCcccc--C--HHHHHHHHHHcCCEEEEeCCcc
Q 009181 270 INRNTVLIVGSAPGFPHGIID--P--IQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 270 i~~~t~~vv~~~~~~~~G~id--~--i~~I~~la~~~~i~lhvD~a~g 313 (541)
|..+.. ..+.+|.++.. | .+.+.++|++.|+-.++|+|+|
T Consensus 76 i~~n~~----y~g~ypl~~~lcr~~i~~~l~~~A~~~G~~~IA~G~t~ 119 (399)
T PRK00509 76 IRANAL----YEGKYPLGTALARPLIAKKLVEIARKEGADAVAHGCTG 119 (399)
T ss_pred HHhChH----hcCcCCCchHHHHHHHHHHHHHHHHHcCCCEEEeCCCc
Confidence 554433 22334444432 1 6789999999999999999987
No 437
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=35.89 E-value=29 Score=37.36 Aligned_cols=31 Identities=13% Similarity=0.111 Sum_probs=27.8
Q ss_pred CCCCccccCHHHHHHHHHHcCCEEEEeCCcc
Q 009181 283 GFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 283 ~~~~G~id~i~~I~~la~~~~i~lhvD~a~g 313 (541)
....|+.++++++++.||++|+.|++|.+.-
T Consensus 74 d~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~N 104 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHENGIKVYADVVLN 104 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 4458999999999999999999999999963
No 438
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=35.80 E-value=3.3e+02 Score=27.38 Aligned_cols=51 Identities=14% Similarity=0.156 Sum_probs=36.3
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~ 255 (541)
+..++|..+..+|..+.. .|++ -.|+++...-..-...++.+|++++.++-
T Consensus 55 v~aSsGN~g~alA~~a~~------~G~~-~~iv~p~~~~~~k~~~l~~~GA~v~~~~~ 105 (316)
T cd06448 55 VCSSGGNAGLAAAYAARK------LGVP-CTIVVPESTKPRVVEKLRDEGATVVVHGK 105 (316)
T ss_pred EEeCCcHHHHHHHHHHHH------cCCC-EEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 445567777777766654 4432 46788887767778888999999998864
No 439
>PF01765 RRF: Ribosome recycling factor; InterPro: IPR023584 The ribosome recycling factor or ribosome release factor (RRF) dissociates ribosomes from mRNA after termination of translation, and is essential for bacterial growth []. Thus ribosomes are 'recycled' and ready for another round of protein synthesis. This entry represents a domain found in ribosome recycling factors.; PDB: 3R8N_Y 1Y69_8 1ISE_A 1EK8_A 1DD5_A 1WIH_A 2Z4L_6 2QBE_6 2V46_Y 1EH1_A ....
Probab=35.54 E-value=1.2e+02 Score=27.48 Aligned_cols=50 Identities=14% Similarity=0.213 Sum_probs=35.0
Q ss_pred CHHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 452 DIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 452 ~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
....+...+...+..+++...+..+|+.++..+.|.-++++..+++..++
T Consensus 56 ~i~~I~kAI~~s~l~l~p~~d~~~i~v~iP~~T~E~R~~l~k~~k~~~E~ 105 (165)
T PF01765_consen 56 LIKAIEKAIQKSNLNLNPQNDGNTIRVPIPPPTEERRKELVKQAKKIAEE 105 (165)
T ss_dssp HHHHHHHHHHHTTSSSEEEEETTEEEEE--SSSHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHCCCCCCcccCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 56778888888877666555568999999988877666666666666554
No 440
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=35.44 E-value=2.9e+02 Score=29.53 Aligned_cols=127 Identities=17% Similarity=0.117 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEec-CCccc---hHHHHH
Q 009181 168 SVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIP-VSAHS---AYDKAA 243 (541)
Q Consensus 168 ~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~-~~~h~---s~~ka~ 243 (541)
...+++..+.+.+.+.+..+.. +|++-|||-.|-..+..+.+.. ....+.-=.+-.+ ..... ...+.+
T Consensus 234 ~~e~l~~~l~~aV~~r~~~~~~------vg~~LSGGlDSs~iaa~a~~~~--~~~~~~~~t~~~~~~~~~~E~~~A~~vA 305 (467)
T TIGR01536 234 LVDELRSLLEDAVKRRLVADVP------VGVLLSGGLDSSLVAAIARREA--PRGPVHTFSIGFEGSPDFDESPYARKVA 305 (467)
T ss_pred HHHHHHHHHHHHHHHHhccCCc------eEEEecCChhHHHHHHHHHHhc--CCCCceEEEEecCCCCCCChHHHHHHHH
Confidence 3455666666666665543322 6799999988887776665421 0001100011112 11122 356678
Q ss_pred hhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCC
Q 009181 244 QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 244 ~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a 311 (541)
+.+|++.+.+.++++. -.+.+++.+... ..|.. .....+.-.+.+.++++|+.++.+|-
T Consensus 306 ~~lg~~~~~i~~~~~~--~~~~~~~~v~~~------~~p~~-~~~~~~~~~l~~~a~~~G~~vlltG~ 364 (467)
T TIGR01536 306 DHLGTEHHEVLFSVEE--GLDALPEVIYHL------EDPTT-IRASIPLYLLSKLAREDGVKVVLSGE 364 (467)
T ss_pred HHhCCcCeEEECCHHH--HHHHHHHHHHhh------CCCCC-CchHHHHHHHHHHHHhcCCEEEEecC
Confidence 8889988888765311 112333333210 11111 11223455788889999998888775
No 441
>PLN03244 alpha-amylase; Provisional
Probab=35.00 E-value=32 Score=38.92 Aligned_cols=37 Identities=19% Similarity=0.057 Sum_probs=31.9
Q ss_pred eecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccc
Q 009181 279 GSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 279 ~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~ 315 (541)
.-+++...|+.++++++++.||+.|+-|+.|-++..+
T Consensus 430 fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~ 466 (872)
T PLN03244 430 FFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYA 466 (872)
T ss_pred ccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccC
Confidence 3456667899999999999999999999999998644
No 442
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.92 E-value=88 Score=26.66 Aligned_cols=72 Identities=21% Similarity=0.219 Sum_probs=44.6
Q ss_pred CCccchHHHHHhhcCCeEEEeeCCCCC--ccCHHHHHHhhcc--CceEEEeecCCCCC---c--cc---cCHHHHHHHHH
Q 009181 233 VSAHSAYDKAAQYFNIKLWRVPVDKEF--RADVKAIKKYINR--NTVLIVGSAPGFPH---G--II---DPIQELGELAL 300 (541)
Q Consensus 233 ~~~h~s~~ka~~~~G~~v~~v~~~~~~--~~d~~~Le~~i~~--~t~~vv~~~~~~~~---G--~i---d~i~~I~~la~ 300 (541)
.+...+...+++.+|+...+||+...+ .-|++++.+++.+ .|.+..+-.++-.+ | .. .+-+++.++.+
T Consensus 44 QP~~~~i~~aa~~aGl~y~~iPV~~~~iT~~dV~~f~~Al~eaegPVlayCrsGtRs~~ly~~~~~~~gm~~de~~a~g~ 123 (130)
T COG3453 44 QPGFAAIAAAAEAAGLTYTHIPVTGGGITEADVEAFQRALDEAEGPVLAYCRSGTRSLNLYGLGELDGGMSRDEIEALGQ 123 (130)
T ss_pred CCChHHHHHHHHhcCCceEEeecCCCCCCHHHHHHHHHHHHHhCCCEEeeecCCchHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 445566788899999999999997522 3467777788864 56665554443211 1 00 23455666666
Q ss_pred HcCC
Q 009181 301 SHGT 304 (541)
Q Consensus 301 ~~~i 304 (541)
.+|+
T Consensus 124 a~G~ 127 (130)
T COG3453 124 AAGF 127 (130)
T ss_pred hhCc
Confidence 5553
No 443
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=34.86 E-value=2.4e+02 Score=24.82 Aligned_cols=69 Identities=10% Similarity=-0.083 Sum_probs=42.1
Q ss_pred HHHhhc-CCeEEEeeCCC-CCccCHHHHHHhhccCceEEEeecC--CCCCccccCHHHHHHHHHHcCCEEEEeCCc
Q 009181 241 KAAQYF-NIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAP--GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (541)
Q Consensus 241 ka~~~~-G~~v~~v~~~~-~~~~d~~~Le~~i~~~t~~vv~~~~--~~~~G~id~i~~I~~la~~~~i~lhvD~a~ 312 (541)
+..+.. |+++..|...+ .|. .++...|...-+-+|+..+ +.+.+...+...|...|-+||+++...-.-
T Consensus 43 ~~L~~~~Gi~v~~vi~~~~gg~---~~i~~~I~~g~i~lVInt~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l~t 115 (142)
T PRK05234 43 GLIQEATGLDVTRLLSGPLGGD---QQIGALIAEGKIDMLIFFRDPLTAQPHDPDVKALLRLADVWNIPVATNRAT 115 (142)
T ss_pred HHHHhccCCeeEEEEcCCCCCc---hhHHHHHHcCceeEEEEecCCCCCCcccchHHHHHHHHHHcCCCEEcCHHH
Confidence 333444 77777662222 232 3355556555444444444 544554667889999999999999976553
No 444
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=34.85 E-value=4.2e+02 Score=26.69 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=59.4
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccc--h--HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS--A--YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRN 273 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~--s--~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~ 273 (541)
++|.|-|......++.+.+ .| ++-+|++.++.-. . +.+-....|+.+..|+-. ++-..+.+-
T Consensus 124 ILT~~~S~tv~~~l~~A~~-----~~-k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~Ds--------av~~~m~~v 189 (310)
T PRK08535 124 IMTHCNSSAALSVIKTAHE-----QG-KDIEVIATETRPRNQGHITAKELAEYGIPVTLIVDS--------AVRYFMKDV 189 (310)
T ss_pred EEEeCCcHHHHHHHHHHHH-----CC-CeEEEEEecCCchhhHHHHHHHHHHCCCCEEEEehh--------HHHHHHHhC
Confidence 7888877666666665543 22 1146777765421 1 223334458888888732 222233333
Q ss_pred ceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCC
Q 009181 274 TVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 274 t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a 311 (541)
.++++....-...|.+.+ --.++-+|+.|+++++|=+-
T Consensus 190 d~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~a~ 230 (310)
T PRK08535 190 DKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVAAE 230 (310)
T ss_pred CEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEecc
Confidence 456665555555665544 35788899999999987554
No 445
>cd00520 RRF Ribosome recycling factor (RRF). Ribosome recycling factor dissociates the posttermination complex, composed of the ribosome, deacylated tRNA, and mRNA, after termination of translation. Thus ribosomes are "recycled" and ready for another round of protein synthesis. RRF is believed to bind the ribosome at the A-site in a manner that mimics tRNA, but the specific mechanisms remain unclear. RRF is essential for bacterial growth. It is not necessary for cell growth in archaea or eukaryotes, but is found in mitochondria or chloroplasts of some eukaryotic species.
Probab=34.26 E-value=2e+02 Score=26.36 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=36.6
Q ss_pred CHHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 452 DIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 452 ~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
....+..++.+.++.+++...+..+|+.++..|.|.-.+++..+++..++
T Consensus 70 ~i~~I~kAI~~s~l~l~P~~dg~~iri~iP~lT~E~R~~lvK~~k~~~E~ 119 (179)
T cd00520 70 AIKAIEKAILNSDLGLNPNNDGAVIRVNLPPLTEERRKELVKDAKKIAEE 119 (179)
T ss_pred hHHHHHHHHHHCCCCCCcCcCCCEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 45677788888888777766667999999888876666666666665543
No 446
>TIGR00496 frr ribosome recycling factor. This model finds only eubacterial proteins. Mitochondrial and/or chloroplast forms might be expected but are not currently known. This protein was previously called ribosome releasing factor. By releasing ribosomes from mRNA at the end of protein biosynthesis, it prevents inappropriate translation from 3-prime regions of the mRNA and frees the ribosome for new rounds of translation. EGAD|53116|YHR038W is part of the frr superfamily.
Probab=33.95 E-value=1.7e+02 Score=26.87 Aligned_cols=49 Identities=12% Similarity=0.169 Sum_probs=35.1
Q ss_pred CHHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 009181 452 DIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVE 500 (541)
Q Consensus 452 ~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~ 500 (541)
....+...+...+.-+++...+..+|+.++..+.|.=.+++..+++..+
T Consensus 65 ~~~~I~kAI~~s~lglnP~~dg~~Iri~iP~lT~E~RkelvK~~k~~~E 113 (176)
T TIGR00496 65 NINAIEKAIQRSDLGLNPNNDGSVIRVNFPPLTEERRKELVKHAKKIAE 113 (176)
T ss_pred hHHHHHHHHHHCCCCCCcccCCCEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 4667778888888777766666789999998876555566666655544
No 447
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=33.51 E-value=32 Score=37.65 Aligned_cols=34 Identities=24% Similarity=0.225 Sum_probs=30.0
Q ss_pred cCCCCCccccCHHHHHHHHHHcCCEEEEeCCccc
Q 009181 281 APGFPHGIIDPIQELGELALSHGTCLHVDLCLGG 314 (541)
Q Consensus 281 ~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg 314 (541)
.++...|+.++++++++.||++|+-|++|.++..
T Consensus 151 ~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH 184 (542)
T TIGR02402 151 APHNAYGGPDDLKALVDAAHGLGLGVILDVVYNH 184 (542)
T ss_pred ccccccCCHHHHHHHHHHHHHCCCEEEEEEccCC
Confidence 4556789999999999999999999999999753
No 448
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=32.95 E-value=3.4e+02 Score=26.92 Aligned_cols=51 Identities=18% Similarity=0.263 Sum_probs=39.4
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~ 255 (541)
+-.|+|..+..+|..+.+ .|++ -.|++|...-..-....+.+|++++.++-
T Consensus 62 v~aSsGN~g~alA~~a~~------~G~~-~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 112 (299)
T TIGR01136 62 IEATSGNTGIALAMVAAA------KGYK-LILTMPETMSLERRKLLRAYGAELILTPA 112 (299)
T ss_pred EEeCCChHHHHHHHHHHH------cCCc-EEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 567778888888776654 4442 57899988777777889999999998874
No 449
>PRK00083 frr ribosome recycling factor; Reviewed
Probab=32.40 E-value=2e+02 Score=26.64 Aligned_cols=50 Identities=10% Similarity=0.177 Sum_probs=36.1
Q ss_pred CHHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 452 DIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 452 ~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
....+...+...+.-+++...+..+|+.++..+.|.-.+++..+++..++
T Consensus 74 ~i~~I~kAI~~s~lgl~P~~dg~~Iri~iP~lT~E~R~elvK~~k~~~E~ 123 (185)
T PRK00083 74 MLKAIEKAIRASDLGLNPSNDGTVIRLPIPPLTEERRKELVKQVKKEAEE 123 (185)
T ss_pred HHHHHHHHHHHCCCCCCcccCCCEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 45677788888877777666678999999988876666666666665543
No 450
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=31.12 E-value=4.5e+02 Score=24.85 Aligned_cols=94 Identities=21% Similarity=0.261 Sum_probs=50.2
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeE--Eec---C-----Ccc----chHHHHHhhcCCeEEEeeCCCCCccCH
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEM--IIP---V-----SAH----SAYDKAAQYFNIKLWRVPVDKEFRADV 263 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~v--i~~---~-----~~h----~s~~ka~~~~G~~v~~v~~~~~~~~d~ 263 (541)
+..|||-.|...+..+.. .| .+| ++. . ..| ....+.|+.+|+.++.++++.......
T Consensus 2 vl~SGGkDS~~al~~a~~------~G---~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~~~~~ 72 (218)
T TIGR03679 2 ALYSGGKDSNYALYKALE------EG---HEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGEKEKEV 72 (218)
T ss_pred eeecCcHHHHHHHHHHHH------cC---CEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCCChHHH
Confidence 577999999988877654 34 233 211 1 112 235677888899888887762111223
Q ss_pred HHHHHhhc----cCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEE
Q 009181 264 KAIKKYIN----RNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLH 307 (541)
Q Consensus 264 ~~Le~~i~----~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lh 307 (541)
+.|.+++. +....|+ +|.+.+ -..+..+|.+.|+.++
T Consensus 73 ~~l~~~l~~~~~~g~~~vv-------~G~i~sd~~~~~~e~v~~~~gl~~~ 116 (218)
T TIGR03679 73 EDLKGALKELKREGVEGIV-------TGAIASRYQKSRIERICEELGLKVF 116 (218)
T ss_pred HHHHHHHHHHHHcCCCEEE-------ECCcccHhHHHHHHHHHHhCCCeEE
Confidence 33444332 2222222 344432 3455567766666544
No 451
>PRK05638 threonine synthase; Validated
Probab=30.87 E-value=2.9e+02 Score=29.39 Aligned_cols=51 Identities=20% Similarity=0.196 Sum_probs=38.5
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~ 255 (541)
+..|+|..+..+|..+++ .|++ -.|++|...-......++.+|++++.++-
T Consensus 116 v~aSsGN~g~alA~~aa~------~G~~-~~i~vp~~~~~~k~~~~~~~GA~vi~v~~ 166 (442)
T PRK05638 116 IVASDGNAAASVAAYSAR------AGKE-AFVVVPRKVDKGKLIQMIAFGAKIIRYGE 166 (442)
T ss_pred EEeCCChHHHHHHHHHHH------cCCC-EEEEEeCCCCHHHHHHHHhcCcEEEEECC
Confidence 566777888888877765 4432 46888887777777888999999999863
No 452
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=30.59 E-value=2.7e+02 Score=22.69 Aligned_cols=49 Identities=22% Similarity=0.185 Sum_probs=32.7
Q ss_pred eEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEE
Q 009181 249 KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHV 308 (541)
Q Consensus 249 ~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhv 308 (541)
.+..++-+ +.+.+..++.....+++++.+ ..+=+++.++|++.+++++.
T Consensus 42 ~lvIt~gd-----R~di~~~a~~~~i~~iIltg~------~~~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 42 DLVITPGD-----REDIQLAAIEAGIACIILTGG------LEPSEEVLELAKELGIPVIS 90 (105)
T ss_dssp EEEEEETT------HHHHHHHCCTTECEEEEETT----------HHHHHHHHHHT-EEEE
T ss_pred eEEEEeCC-----cHHHHHHHHHhCCCEEEEeCC------CCCCHHHHHHHHHCCCEEEE
Confidence 44445444 567778888888888888754 45678999999999988875
No 453
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=30.36 E-value=2e+02 Score=27.93 Aligned_cols=88 Identities=14% Similarity=0.311 Sum_probs=54.0
Q ss_pred CCCeEEecCCC-eeEEEEec-------CCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 009181 430 IPELFIIGRPD-MTIVAFGS-------DVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVET 501 (541)
Q Consensus 430 ~~~~~v~~~~~-~~~v~f~~-------~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~id~~i~~L~~~~~~ 501 (541)
+.+.-+..|+. .++|.|-- +......+.+.|.++|+.+.+.. +.++..|....+++.+.++.+++.
T Consensus 5 i~~~wvl~P~~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtP------y~~tfDH~~~A~~~~~~f~~~~~~ 78 (250)
T PF07082_consen 5 ISGSWVLIPPRPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATP------YVVTFDHQAIAREVWERFERCLRA 78 (250)
T ss_pred ccCcEEEeCCCCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEe------cCCCCcHHHHHHHHHHHHHHHHHH
Confidence 33444444443 45666642 11234567788999997665432 334555667778888888888888
Q ss_pred HHcCCCCCCCCcchhhhhcCCCC
Q 009181 502 VKQNPGPANGSLAPIYGAAGRMP 524 (541)
Q Consensus 502 l~~~~~~~~~~~~~~yg~~~~~~ 524 (541)
+.+..+. ....-+.||+.+|+=
T Consensus 79 L~~~~~~-~~~~lP~~~vGHSlG 100 (250)
T PF07082_consen 79 LQKRGGL-DPAYLPVYGVGHSLG 100 (250)
T ss_pred HHHhcCC-CcccCCeeeeecccc
Confidence 8765432 122357899988874
No 454
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=30.08 E-value=1.9e+02 Score=27.49 Aligned_cols=97 Identities=20% Similarity=0.213 Sum_probs=52.1
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeE--EecC-----Cccc----hHHHHHhhcCCeEEEeeCCCCCccCHHHH
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEM--IIPV-----SAHS----AYDKAAQYFNIKLWRVPVDKEFRADVKAI 266 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~v--i~~~-----~~h~----s~~ka~~~~G~~v~~v~~~~~~~~d~~~L 266 (541)
++-|||-.|.....++.++ ..- .-+ +++. ..|. -+...++.+|+.++.++++....--.++|
T Consensus 5 ~l~SGGKDS~lAl~~a~~~-~~v------~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~~~~~~~l 77 (218)
T PF01902_consen 5 ALWSGGKDSCLALYRALRQ-HEV------VCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDEEDYVEDL 77 (218)
T ss_dssp EE--SSHHHHHHHHHHHHT--EE------EEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---CCCHHHHH
T ss_pred EEEcCcHHHHHHHHHHHHh-CCc------cEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCccchhhHHH
Confidence 6789999999988887764 210 001 1111 1232 37788899999999888863222345777
Q ss_pred HHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEE
Q 009181 267 KKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLH 307 (541)
Q Consensus 267 e~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lh 307 (541)
.+++++-- +.+. .+|.++- ...+-.+|.+.|+..+
T Consensus 78 ~~~l~~~~----v~~v--v~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 78 KEALKELK----VEAV--VFGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HHHHCTC------SEE--E--TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHHHHcC----CCEE--EECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 77776422 1111 2677753 3578888999887765
No 455
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=30.07 E-value=2.5e+02 Score=30.74 Aligned_cols=127 Identities=14% Similarity=0.153 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCC-eEEecCCcc----chHHHHHh
Q 009181 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRP-EMIIPVSAH----SAYDKAAQ 244 (541)
Q Consensus 170 ~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~-~vi~~~~~h----~s~~ka~~ 244 (541)
..+...+.+.+.+.+-.+.. +|++.|||-.|-..|..+.+..-... .. --+--+..+ .-...+++
T Consensus 213 ~~l~~~l~~sV~~r~~advp------vg~~lSGGlDSS~Iaa~a~~~~~~~~----~~~fsvg~~~~~~~D~~~a~~~A~ 282 (542)
T COG0367 213 EHLRSLLEDAVKRRLVADVP------VGVFLSGGLDSSLIAAIAAEELGKEG----KTTFTVGFEDSDSPDAKYARAVAK 282 (542)
T ss_pred HHHHHHHHHHHHHHhccCCc------EEEEeCCCccHHHHHHHHHHhccccc----eeeeEeecCCCCCchHHHHHHHHH
Confidence 34444444455544433333 77999999888777777765311100 00 011122222 11466778
Q ss_pred hcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEE-----eCCcccc
Q 009181 245 YFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHV-----DLCLGGF 315 (541)
Q Consensus 245 ~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhv-----D~a~gg~ 315 (541)
.+|.+.+.+.+ ..+++.+++.+-. .....|.. .+...|+--+++.+++++..++. |+.+||.
T Consensus 283 ~lg~~h~~~~~------~~~e~~~~~~~vv--~~~~~p~~-~~~~~ply~~~~~a~~~g~kVvLSGeGADElFgGY 349 (542)
T COG0367 283 FLGTPHHEIIL------TNEELLNALPEVV--KALDTPGG-MAASIPLYLLSRKARAEGEKVVLSGEGADELFGGY 349 (542)
T ss_pred HhCCCcEEEee------cHHHHHHHHHHHH--hhcCCCCc-ccchhHHHHHHHhhhhcCcEEeecCccHHHHhcCC
Confidence 88886666654 4555555544321 12223322 56667888999999999988876 6666655
No 456
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=29.68 E-value=3e+02 Score=22.12 Aligned_cols=71 Identities=14% Similarity=0.113 Sum_probs=42.5
Q ss_pred cchHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeC
Q 009181 236 HSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDL 310 (541)
Q Consensus 236 h~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~ 310 (541)
-..+...++-.|.+.+...-+....-....++..+.+--.+|+++... .+. -...+.+.|++++++++.=-
T Consensus 12 ~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~v-sH~---~~~~vk~~akk~~ip~~~~~ 82 (97)
T PF10087_consen 12 ERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYV-SHN---AMWKVKKAAKKYGIPIIYSR 82 (97)
T ss_pred HHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCc-ChH---HHHHHHHHHHHcCCcEEEEC
Confidence 455777888889988877111122222234777776544444443322 232 25788889999999887543
No 457
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=29.58 E-value=5.9e+02 Score=25.54 Aligned_cols=66 Identities=12% Similarity=0.217 Sum_probs=41.9
Q ss_pred ccchHHHHHhhcCCeEEEe-eCCCCCccCHHHHHHhhc---c-CceEEEeecCCCCCccccCHHHHHHHHHHcCCEEE
Q 009181 235 AHSAYDKAAQYFNIKLWRV-PVDKEFRADVKAIKKYIN---R-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH 307 (541)
Q Consensus 235 ~h~s~~ka~~~~G~~v~~v-~~~~~~~~d~~~Le~~i~---~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lh 307 (541)
.|++|...++.+|+++..+ ...++....+.+|.+.++ + +..+|+.. ++++ -+.+..++++.|+.+.
T Consensus 209 ~H~af~Yf~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e-~~~~------~~~~~~la~e~g~~v~ 279 (311)
T PRK09545 209 FHDAYGYFEKHYGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAE-PQFR------PAVIESVAKGTSVRMG 279 (311)
T ss_pred ECchHHHHHHhCCCceeeeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEec-CCCC------hHHHHHHHHhcCCeEE
Confidence 7999999999999987643 333455566777666554 3 45555544 4332 2455666777776653
No 458
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=28.71 E-value=6.1e+02 Score=25.40 Aligned_cols=51 Identities=22% Similarity=0.203 Sum_probs=36.0
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~ 255 (541)
+..++|..+..+|..+.. .|++ -.+++|...-....+.++.+|++++.++-
T Consensus 74 v~~SsGN~g~alA~~a~~------~G~~-~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~ 124 (324)
T cd01563 74 ACASTGNTSASLAAYAAR------AGIK-CVVFLPAGKALGKLAQALAYGATVLAVEG 124 (324)
T ss_pred EEeCCCHHHHHHHHHHHH------cCCc-eEEEEeCCCCHHHHHHHHHcCCEEEEECC
Confidence 555677777777755443 4432 46788887756667788899999998864
No 459
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=28.42 E-value=2.2e+02 Score=27.83 Aligned_cols=62 Identities=15% Similarity=0.128 Sum_probs=37.0
Q ss_pred HHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCC
Q 009181 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 242 a~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a 311 (541)
.+...+-++...+.++ ..+.+++.+.+.. ++++ .+..+.+ +++.++.+.+++++.++++|..
T Consensus 66 ~i~~~~pe~~~~~~~~----~~~~~~~~~~~~d-avvi-g~Gl~~~--~~~~~l~~~~~~~~~pvVlDa~ 127 (272)
T TIGR00196 66 LINSVSPELIVHRLGW----KVDEDEELLERYD-VVVI-GPGLGQD--PSFKKAVEEVLELDKPVVLDAD 127 (272)
T ss_pred HHhhcCCEEEEecchh----hHHHHHhhhccCC-EEEE-cCCCCCC--HHHHHHHHHHHhcCCCEEEEhH
Confidence 4445555665555431 3455555554433 3333 3323333 3388899999999999999974
No 460
>PRK05331 putative phosphate acyltransferase; Provisional
Probab=28.36 E-value=6.5e+02 Score=25.64 Aligned_cols=58 Identities=10% Similarity=-0.098 Sum_probs=33.9
Q ss_pred cCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchhhhhhhcCCCCCCCCcCCCCceEEEeCC
Q 009181 272 RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDV 344 (541)
Q Consensus 272 ~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~~f~~~~g~~~p~~~~~~~gvdsis~~~ 344 (541)
++|++-+++.++-..=..+-..+-.++.++.+..+..|+-. ..-+...-.+|.+.+|+
T Consensus 173 ~~PrVAlLn~Gse~~kg~~~~~eA~~Ll~~~~~~l~f~G~i---------------e~~dl~~g~~DVvV~DG 230 (334)
T PRK05331 173 ENPRVGLLNIGEEEIKGNELVKEAYELLKAADSSINFIGNV---------------EGRDILKGTADVVVCDG 230 (334)
T ss_pred CCCeEEEEeCCCCCCCCCHHHHHHHHHHHccCCCceEEeec---------------cCCCcCCCCCCEEEECC
Confidence 35877777776544333445677777887644446666642 12333334468888874
No 461
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=28.29 E-value=56 Score=31.75 Aligned_cols=50 Identities=22% Similarity=0.303 Sum_probs=32.3
Q ss_pred CHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCC
Q 009181 262 DVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 262 d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a 311 (541)
+.+.+++.+.+=..+|+...-.-.-+....+.+|.+.+++.++++++|+-
T Consensus 91 av~~i~k~L~RlhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 91 AVDIIEKLLQRLHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred hHhHHHHHHhheeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 45555665555455555544222222233377899999999999999987
No 462
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=28.00 E-value=5.8e+02 Score=24.91 Aligned_cols=112 Identities=16% Similarity=0.052 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCc--cch--HHHHHhhc
Q 009181 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSA--HSA--YDKAAQYF 246 (541)
Q Consensus 171 ~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~--h~s--~~ka~~~~ 246 (541)
..++.+.+..++.++. + + ++|.|.+..+...+..+ +++ .+|++.++. +.. +.+.....
T Consensus 72 ~~~~~~~~~A~~~i~~---d----v--ILT~s~S~~v~~~l~~~------~~~---~~V~v~ESrP~~eG~~~a~~L~~~ 133 (253)
T PRK06372 72 KHEKMAIEHAKPLFND---S----V--IGTISSSQVLKAFISSS------EKI---KSVYILESRPMLEGIDMAKLLVKS 133 (253)
T ss_pred HHHHHHHHHHHhhcCC---C----E--EEEeCCcHHHHHHHHhc------CCC---CEEEEecCCCchHHHHHHHHHHHC
Confidence 3344455555555522 2 4 78888766665555332 122 467776643 222 22233334
Q ss_pred CCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEE
Q 009181 247 NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHV 308 (541)
Q Consensus 247 G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhv 308 (541)
|+++..++-. .+-..+.+-.++++....-...|.+.+ --.++-.|+.++++++|
T Consensus 134 GI~vtli~Ds--------a~~~~m~~vd~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 134 GIDVVLLTDA--------SMCEAVLNVDAVIVGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred CCCEEEEehh--------HHHHHHHhCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 8888777522 222334444556665555445565544 35788888999999999
No 463
>PRK04527 argininosuccinate synthase; Provisional
Probab=27.70 E-value=2.6e+02 Score=29.27 Aligned_cols=101 Identities=16% Similarity=0.080 Sum_probs=57.2
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEe---cCCcc-----chHHHHHhhcCC-eEEEeeCCCCCccCHHHHHH
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMII---PVSAH-----SAYDKAAQYFNI-KLWRVPVDKEFRADVKAIKK 268 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~---~~~~h-----~s~~ka~~~~G~-~v~~v~~~~~~~~d~~~Le~ 268 (541)
+..|||-.+-.++..+. + .| .+|+. ..... ....+.|..+|+ +...+++.+.+ ..+-+..
T Consensus 7 VA~SGGvDSSvla~~l~-e-----~G---~~Viavt~d~gq~~~~El~~a~~~A~~lG~~~~~viD~~eef--~e~vi~p 75 (400)
T PRK04527 7 LAFSGGLDTSFCIPYLQ-E-----RG---YAVHTVFADTGGVDAEERDFIEKRAAELGAASHVTVDGGPAI--WEGFVKP 75 (400)
T ss_pred EEEcCChHHHHHHHHHH-H-----cC---CcEEEEEEEeCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHH--HHHHHHH
Confidence 77888888777665532 2 34 33421 11111 124566777898 57777765433 2223333
Q ss_pred hhccCceEEEeecCCCCCcccc---CHHHHHHHHHHcCCEEEEeCCcc
Q 009181 269 YINRNTVLIVGSAPGFPHGIID---PIQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 269 ~i~~~t~~vv~~~~~~~~G~id---~i~~I~~la~~~~i~lhvD~a~g 313 (541)
+|..|.. ..+.+|.++.+ -.+.+.++|++.|+..++|+|.|
T Consensus 76 ~i~aNa~----y~G~yPl~~~nR~~~~~~l~e~A~~~G~~~IA~G~tg 119 (400)
T PRK04527 76 LVWAGEG----YQGQYPLLVSDRYLIVDAALKRAEELGTRIIAHGCTG 119 (400)
T ss_pred HHhcchh----hcCCCCCccccHHHHHHHHHHHHHHCCCCEEEecCcC
Confidence 4433321 12223333331 25689999999999999999974
No 464
>PRK12313 glycogen branching enzyme; Provisional
Probab=27.24 E-value=50 Score=37.00 Aligned_cols=33 Identities=18% Similarity=0.165 Sum_probs=28.7
Q ss_pred CCCCCccccCHHHHHHHHHHcCCEEEEeCCccc
Q 009181 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCLGG 314 (541)
Q Consensus 282 ~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg 314 (541)
++...|+.++++++++.||++|+-|+.|.++..
T Consensus 212 i~~~~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH 244 (633)
T PRK12313 212 PTSRYGTPEDFMYLVDALHQNGIGVILDWVPGH 244 (633)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 444578899999999999999999999999753
No 465
>PLN02672 methionine S-methyltransferase
Probab=27.13 E-value=9e+02 Score=29.05 Aligned_cols=142 Identities=10% Similarity=0.037 Sum_probs=81.8
Q ss_pred cccCCCCc-ccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCC
Q 009181 156 AHTNPLHL-DIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVS 234 (541)
Q Consensus 156 ~~~n~~~~-~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~ 234 (541)
+..+++-| +.-.|...+..-+...+..++|.|-.. ++| ++-++-..|+..+++.+.-.+.-- |+- ++..
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~ 483 (1082)
T PLN02672 414 LKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTP--DNV--VVFPSRAVAIENALRLFSPRLAIV-----DEH-LTRW 483 (1082)
T ss_pred HccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCc--cce--EEeccHHHHHHHHHHhhChHHHhh-----hhh-hhcc
Confidence 34444433 223456677777788888889988332 136 788888999988888764221100 111 2333
Q ss_pred ccchHHHHHhhcC--------CeEEEeeCCCCCccCHHHHHHhhcc-CceEEEeecCCCCCccccCHHHHHHHHHHcCCE
Q 009181 235 AHSAYDKAAQYFN--------IKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTC 305 (541)
Q Consensus 235 ~h~s~~ka~~~~G--------~~v~~v~~~~~~~~d~~~Le~~i~~-~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~ 305 (541)
-+..|..+...-| ..+..+... .+. +.+.++|++ ++.+|+.....+..-+..-++.|.+.+++.|++
T Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (1082)
T PLN02672 484 LPKKWLTSLAIENATSDSKSDDVITVIEAP--RQS--DLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGAR 559 (1082)
T ss_pred CCHHHHhHhhhhcccccCccCCeEEEEeCC--Ccc--hHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcE
Confidence 4445555544443 222222211 111 244455543 566666555544433445588899999999999
Q ss_pred EEEeCC
Q 009181 306 LHVDLC 311 (541)
Q Consensus 306 lhvD~a 311 (541)
|+.|..
T Consensus 560 ~~~~~~ 565 (1082)
T PLN02672 560 LFLDIS 565 (1082)
T ss_pred EEEehh
Confidence 999975
No 466
>PRK05402 glycogen branching enzyme; Provisional
Probab=27.01 E-value=51 Score=37.59 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=28.7
Q ss_pred CCCCCccccCHHHHHHHHHHcCCEEEEeCCcccc
Q 009181 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 282 ~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~ 315 (541)
++...|+.++++++++.||++|+.|++|.++..+
T Consensus 307 i~~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~ 340 (726)
T PRK05402 307 PTSRFGTPDDFRYFVDACHQAGIGVILDWVPAHF 340 (726)
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 3445788888999999999999999999997543
No 467
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=26.90 E-value=5.3e+02 Score=27.25 Aligned_cols=52 Identities=15% Similarity=0.234 Sum_probs=39.8
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~ 256 (541)
+-.++|..+..+|..+.+ .|++ -.|++|...-..-....+.+|++++.++.+
T Consensus 66 v~~ssGN~g~alA~~a~~------~G~~-~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (454)
T TIGR01137 66 IEPTSGNTGIGLALVAAI------KGYK-CIIVLPEKMSNEKVDVLKALGAEIVRTPTA 117 (454)
T ss_pred EEeCCcHHHHHHHHHHHH------cCCe-EEEEeCCCcCHHHHHHHHHCCCEEEEcCCc
Confidence 667778888888887765 4542 467888877667778889999999999854
No 468
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=26.56 E-value=3e+02 Score=29.41 Aligned_cols=100 Identities=11% Similarity=0.104 Sum_probs=62.6
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhc---CCeEEEeeCCC-CCccCHHHHHHhhccC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF---NIKLWRVPVDK-EFRADVKAIKKYINRN 273 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~---G~~v~~v~~~~-~~~~d~~~Le~~i~~~ 273 (541)
++|.|.+..+.+.+.-+.+ .|-+-..+++.+-....-.+.++.+ |+++.++-.+. +|. +.+-
T Consensus 363 iltyg~s~vV~~ill~A~~-----~~k~frVvVVDSRP~~EG~~~lr~Lv~~GinctYv~I~a~syi---------m~ev 428 (556)
T KOG1467|consen 363 LLTYGSSSVVNMILLEAKE-----LGKKFRVVVVDSRPNLEGRKLLRRLVDRGINCTYVLINAASYI---------MLEV 428 (556)
T ss_pred EEEecchHHHHHHHHHHHH-----hCcceEEEEEeCCCCcchHHHHHHHHHcCCCeEEEEehhHHHH---------HHhc
Confidence 8899988888877776654 2211123445444444444444444 88888876653 221 2334
Q ss_pred ceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEEEeCC
Q 009181 274 TVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 274 t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lhvD~a 311 (541)
++++.+.+.-...|.+.. -..|+=.++.||++++|=|=
T Consensus 429 tkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE 469 (556)
T KOG1467|consen 429 TKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCE 469 (556)
T ss_pred ceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEec
Confidence 777777777777788876 34677777889999988554
No 469
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .
Probab=26.37 E-value=4e+02 Score=25.63 Aligned_cols=104 Identities=16% Similarity=0.091 Sum_probs=57.3
Q ss_pred ceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCcc---chHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhcc
Q 009181 196 CGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAH---SAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR 272 (541)
Q Consensus 196 ~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h---~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~ 272 (541)
+|++.|||-.|...+..+.+... ..+..-.+......+ .-..+.++.+|++.+.+.++ .+++.+.+..
T Consensus 18 v~~~LSGGlDSs~va~~~~~~~~---~~~~~~~~~~~~~~~~e~~~a~~~a~~l~~~~~~~~~~------~~~~~~~~~~ 88 (269)
T cd01991 18 VGVLLSGGLDSSLVAALAARLLP---EPVKTFSIGFGFEGSDEREYARRVAEHLGTEHHEVEFT------PADLLAALPD 88 (269)
T ss_pred eEEeecccHHHHHHHHHHHHhhC---CCCceEEEeeCCCCCChHHHHHHHHHHhCCcceEEEcC------HHHHHHHHHH
Confidence 67999999999888877765311 111101111121111 22566778889888877754 2333332221
Q ss_pred CceEEEeecCCCCCc--cccCHHHHHHHHHHcCCEEEEeCCcc
Q 009181 273 NTVLIVGSAPGFPHG--IIDPIQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 273 ~t~~vv~~~~~~~~G--~id~i~~I~~la~~~~i~lhvD~a~g 313 (541)
- +....+|.+ ...++-.+++.++++++.++.+|..|
T Consensus 89 ~-----~~~~~~p~~~~~~~~~~~l~~~a~~~~~~v~l~G~g~ 126 (269)
T cd01991 89 V-----IWELDEPFADSSAIPLYLLSRLARKHGIKVVLSGEGA 126 (269)
T ss_pred H-----HHHhCCCCCCcHHHHHHHHHHHHHHhCCEEEEecCCc
Confidence 0 001111222 22356788999999998888877743
No 470
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=26.33 E-value=5.3e+02 Score=23.91 Aligned_cols=130 Identities=8% Similarity=0.003 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCC---ccch----HHHH
Q 009181 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVS---AHSA----YDKA 242 (541)
Q Consensus 170 ~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~---~h~s----~~ka 242 (541)
.++-....+.+.+++.-+.-. + .--.=+++.+..++..+.......+.-++++|++... .|.- +...
T Consensus 32 ~~~l~p~m~~vG~~w~~~~i~----v--a~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~ 105 (201)
T cd02070 32 EEGLAPGMDIVGDKYEEGEIF----V--PELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATM 105 (201)
T ss_pred HHHHHHHHHHHHHHHccCCee----H--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHH
Confidence 344455556677777554311 0 0011134455555555544333221112356654322 2432 3444
Q ss_pred HhhcCCeEEEeeCCCCCccCHHHHHHhhc-cCceEEEeecCCCCCccccCHHHHHHHHHHc----CCEEEEeCC
Q 009181 243 AQYFNIKLWRVPVDKEFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDPIQELGELALSH----GTCLHVDLC 311 (541)
Q Consensus 243 ~~~~G~~v~~v~~~~~~~~d~~~Le~~i~-~~t~~vv~~~~~~~~G~id~i~~I~~la~~~----~i~lhvD~a 311 (541)
++..|.+++....+ +.++++.+++. .++.+|.++.-.+ .....+.++.+..++. ++.+++=|.
T Consensus 106 l~~~G~~vi~lG~~----~p~~~l~~~~~~~~~d~v~lS~~~~--~~~~~~~~~i~~lr~~~~~~~~~i~vGG~ 173 (201)
T cd02070 106 LEANGFEVIDLGRD----VPPEEFVEAVKEHKPDILGLSALMT--TTMGGMKEVIEALKEAGLRDKVKVMVGGA 173 (201)
T ss_pred HHHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEecccc--ccHHHHHHHHHHHHHCCCCcCCeEEEECC
Confidence 56668898776543 56777777665 4677877777543 3356788888888775 467777665
No 471
>PLN02356 phosphateglycerate kinase
Probab=26.31 E-value=1.7e+02 Score=30.91 Aligned_cols=49 Identities=20% Similarity=0.224 Sum_probs=38.7
Q ss_pred cCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC
Q 009181 200 TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (541)
Q Consensus 200 t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~ 255 (541)
.|+|..++.+|+.+.. .|++ -.|++|+..-..-.+.++.+|++++.++-
T Consensus 110 aSSGN~g~alA~~aa~------~G~~-~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 110 GSAGSTAISLATVAPA------YGCK-CHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred eCCHHHHHHHHHHHHH------cCCc-EEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 5888889888888875 5542 56788887777778888999999999863
No 472
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=26.29 E-value=5.3e+02 Score=23.89 Aligned_cols=94 Identities=20% Similarity=0.302 Sum_probs=53.4
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeE---Ee--cCC---------ccchHHHHHhhcCCeEEEeeCCCCCccCH
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEM---II--PVS---------AHSAYDKAAQYFNIKLWRVPVDKEFRADV 263 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~v---i~--~~~---------~h~s~~ka~~~~G~~v~~v~~~~~~~~d~ 263 (541)
+..|||..|..++..+.. .| .+| ++ +.. ......+.|+.+|+.+..++++.+..--.
T Consensus 4 v~~SGGkDS~~al~~a~~------~G---~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~~~~e~~~ 74 (194)
T cd01994 4 ALISGGKDSCYALYRALE------EG---HEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEISGEEEDEV 74 (194)
T ss_pred EEecCCHHHHHHHHHHHH------cC---CEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCCCCchHHH
Confidence 678999999998888765 33 222 11 111 11235677888899888887643111112
Q ss_pred HHHHHhhcc----CceEEEeecCCCCCccccC---HHHHHHHHHHcCCEEE
Q 009181 264 KAIKKYINR----NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLH 307 (541)
Q Consensus 264 ~~Le~~i~~----~t~~vv~~~~~~~~G~id~---i~~I~~la~~~~i~lh 307 (541)
++|.+++.+ ....|+ +|.+++ -..+-.+|++.|+..+
T Consensus 75 ~~l~~~l~~~~~~g~~~vv-------~G~i~sd~~~~~~e~~~~~~gl~~~ 118 (194)
T cd01994 75 EDLKELLRKLKEEGVDAVV-------FGAILSEYQRTRVERVCERLGLEPL 118 (194)
T ss_pred HHHHHHHHHHHHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEEE
Confidence 444444432 112222 566643 3567788888887655
No 473
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=26.22 E-value=81 Score=31.60 Aligned_cols=59 Identities=14% Similarity=0.262 Sum_probs=41.6
Q ss_pred EeeCCCCCccCHHHHHHhhcc------CceEEEeecCCCCCccccCHHHHHHHHHHc---CCEEEEeC
Q 009181 252 RVPVDKEFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDPIQELGELALSH---GTCLHVDL 310 (541)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~i~~------~t~~vv~~~~~~~~G~id~i~~I~~la~~~---~i~lhvD~ 310 (541)
.-|+++++++|.+.+++.++. +-.+++.+.+.+++=+.+.-.++.+.+.+. .+++++=.
T Consensus 13 vTPF~~dg~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpviaG~ 80 (299)
T COG0329 13 VTPFDEDGSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIAGV 80 (299)
T ss_pred ccCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEEec
Confidence 345666799999999998863 245666667767766777777888888775 36666543
No 474
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=25.76 E-value=1.1e+02 Score=25.71 Aligned_cols=45 Identities=18% Similarity=0.078 Sum_probs=29.7
Q ss_pred CHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcc
Q 009181 262 DVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (541)
Q Consensus 262 d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~g 313 (541)
-++.++++....+..+++..+ ..-+++.++|+++|+.++-..|.|
T Consensus 68 ~~~~v~~~~~~g~~~v~~~~g-------~~~~~~~~~a~~~gi~vigp~C~g 112 (116)
T PF13380_consen 68 VPEIVDEAAALGVKAVWLQPG-------AESEELIEAAREAGIRVIGPNCLG 112 (116)
T ss_dssp HHHHHHHHHHHT-SEEEE-TT-------S--HHHHHHHHHTT-EEEESS-HH
T ss_pred HHHHHHHHHHcCCCEEEEEcc-------hHHHHHHHHHHHcCCEEEeCCcce
Confidence 345566666667777777666 556899999999999999888865
No 475
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=25.73 E-value=53 Score=36.60 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=29.2
Q ss_pred CCCCCccccCHHHHHHHHHHcCCEEEEeCCcccc
Q 009181 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 282 ~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~ 315 (541)
++...|+.++++++++.||+.|+.|++|.++..+
T Consensus 198 ~~~~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~ 231 (613)
T TIGR01515 198 PTSRFGTPDDFMYFVDACHQAGIGVILDWVPGHF 231 (613)
T ss_pred cccccCCHHHHHHHHHHHHHCCCEEEEEecccCc
Confidence 4456788999999999999999999999997533
No 476
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=25.57 E-value=2e+02 Score=27.41 Aligned_cols=52 Identities=23% Similarity=0.348 Sum_probs=35.5
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~ 256 (541)
+..++|..+..+|..+.. .|++ -.++++..........++.+|++++.++-+
T Consensus 54 v~~ssGN~g~alA~~a~~------~g~~-~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 54 IESTGGNTGIALAAAAAR------LGLK-CTIVMPEGASPEKVAQMRALGAEVVLVPGD 105 (244)
T ss_pred EEeCCcHHHHHHHHHHHH------cCCC-EEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 444456666666665543 4432 467888877777778889999999988754
No 477
>PRK13724 conjugal transfer protein TrbD; Provisional
Probab=25.49 E-value=43 Score=24.16 Aligned_cols=22 Identities=14% Similarity=0.446 Sum_probs=17.9
Q ss_pred hcCCCCChhHHHHHHHHHHHhc
Q 009181 519 AAGRMPDRGMVNELLVNYMDST 540 (541)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~ 540 (541)
.+-||||+++-+|++...|-.|
T Consensus 10 t~~SVpdktVsDDF~h~VlSNC 31 (65)
T PRK13724 10 TARSVPDKSVSDDFMHAVLSNC 31 (65)
T ss_pred eeeecCCccccHHHHHHHHhcC
Confidence 3678999999999998877543
No 478
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=25.39 E-value=92 Score=28.44 Aligned_cols=54 Identities=13% Similarity=0.103 Sum_probs=39.9
Q ss_pred CccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccchh
Q 009181 259 FRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVL 317 (541)
Q Consensus 259 ~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~~~ 317 (541)
|+-|...|+++++-++ +.++++.- ..+-++.|.++.++.|+.+..|.-++|--+
T Consensus 10 GK~D~~~lk~~~d~~~---I~T~Gs~i--~~~~i~~i~~~~~~rgVIIfTDpD~~GekI 63 (174)
T TIGR00334 10 GKDDQARIKQAFDVDV---IETNGSAL--KDETINLIKKAQKKQGVIILTDPDFPGEKI 63 (174)
T ss_pred cchHHHHHHHhcCceE---EEECCCcc--CHHHHHHHHHHhhcCCEEEEeCCCCchHHH
Confidence 7779999999986333 34554321 224488888889999999999999988754
No 479
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=25.05 E-value=1.4e+02 Score=29.92 Aligned_cols=75 Identities=19% Similarity=0.175 Sum_probs=49.9
Q ss_pred ecCCccchHHHHHhh--cCCeEEEeeCCCCCccCHHHHHHhhccCceE-EEeecCCCCCccccCHHHHHHHHHHcCCEEE
Q 009181 231 IPVSAHSAYDKAAQY--FNIKLWRVPVDKEFRADVKAIKKYINRNTVL-IVGSAPGFPHGIIDPIQELGELALSHGTCLH 307 (541)
Q Consensus 231 ~~~~~h~s~~ka~~~--~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~-vv~~~~~~~~G~id~i~~I~~la~~~~i~lh 307 (541)
..-++|+++...-+. -.+.++.+|.+ .-++.++++.....+. |+++.+ ++ ..+-++|.++|+++|+.++
T Consensus 49 ~G~~~y~sv~dlp~~~~~DlAvi~vp~~----~v~~~l~e~~~~gvk~avI~s~G-f~---~~~~~~l~~~a~~~girvl 120 (291)
T PRK05678 49 LGLPVFNTVAEAVEATGANASVIYVPPP----FAADAILEAIDAGIDLIVCITEG-IP---VLDMLEVKAYLERKKTRLI 120 (291)
T ss_pred eCeeccCCHHHHhhccCCCEEEEEcCHH----HHHHHHHHHHHCCCCEEEEECCC-CC---HHHHHHHHHHHHHcCCEEE
Confidence 344566777776664 55666666643 3567888888877654 555554 22 2223489999999999998
Q ss_pred EeCCcc
Q 009181 308 VDLCLG 313 (541)
Q Consensus 308 vD~a~g 313 (541)
==.|.|
T Consensus 121 GPNc~G 126 (291)
T PRK05678 121 GPNCPG 126 (291)
T ss_pred CCCCCc
Confidence 777765
No 480
>PF10894 DUF2689: Protein of unknown function (DUF2689); InterPro: IPR024396 Members of this protein family are annotated as conjugal transfer protein TrbD; however, currently no function is known.
Probab=25.04 E-value=41 Score=24.05 Aligned_cols=22 Identities=14% Similarity=0.446 Sum_probs=17.9
Q ss_pred hcCCCCChhHHHHHHHHHHHhc
Q 009181 519 AAGRMPDRGMVNELLVNYMDST 540 (541)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~ 540 (541)
.+-||||+++-+++....|-.|
T Consensus 10 ta~sVPdk~vsDDFmhaVlSNC 31 (61)
T PF10894_consen 10 TARSVPDKSVSDDFMHAVLSNC 31 (61)
T ss_pred EEEecCCCcccHHHHHHHHhcC
Confidence 4678999999999998877543
No 481
>cd01542 PBP1_TreR_like Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of TreR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding wh
Probab=24.96 E-value=3e+02 Score=25.95 Aligned_cols=64 Identities=11% Similarity=-0.017 Sum_probs=37.4
Q ss_pred HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEe
Q 009181 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVD 309 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD 309 (541)
+..+++..|.++...+.+.+-.-..+.+++.+..+.-.+++..... + ..+.+.+++.+++++.=
T Consensus 21 i~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~~dgii~~~~~~------~-~~~~~~~~~~~ipvv~~ 84 (259)
T cd01542 21 ILAALYENGYQMLLMNTNFSIEKEIEALELLARQKVDGIILLATTI------T-DEHREAIKKLNVPVVVV 84 (259)
T ss_pred HHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEeCCCC------C-HHHHHHHhcCCCCEEEE
Confidence 4455666788887776543322234556666667777777764321 1 34555666778766543
No 482
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=24.96 E-value=2.3e+02 Score=24.69 Aligned_cols=60 Identities=15% Similarity=-0.025 Sum_probs=43.3
Q ss_pred HHHHHhhcCCeEEEeeCCCCCccCHHHH-HHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCC
Q 009181 239 YDKAAQYFNIKLWRVPVDKEFRADVKAI-KKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGT 304 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~~~~~d~~~L-e~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i 304 (541)
+...++..|.+++....+ ..++++ +++.++++-+|.+|+-. +.+...++++.+.+++.|+
T Consensus 21 v~~~l~~~GfeVi~LG~~----v~~e~~v~aa~~~~adiVglS~l~--~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 21 LDHAFTNAGFNVVNLGVL----SPQEEFIKAAIETKADAILVSSLY--GHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEeccc--ccCHHHHHHHHHHHHHCCC
Confidence 455666779999887765 355555 55566788888888876 3556678999999998864
No 483
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type. Trehalose synthase catalyzes a one-step conversion of maltose to trehalose. This is an alternative to the OtsAB and TreYZ pathways. This family includes a characterized example from Pseudomonas stutzeri plus very closely related sequences from other Pseudomonads. Cutoff scores are set to find a more distantly related sequence from Desulfovibrio vulgaris, likely to be functionally equivalent, between trusted and noise limits.
Probab=24.93 E-value=61 Score=35.94 Aligned_cols=78 Identities=15% Similarity=0.006 Sum_probs=45.5
Q ss_pred CccchHHHHHhhcCCeEEEee-CCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCCc
Q 009181 234 SAHSAYDKAAQYFNIKLWRVP-VDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (541)
Q Consensus 234 ~~h~s~~ka~~~~G~~v~~v~-~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~ 312 (541)
.+......+.+.+|++.+++. +-+.|-+.-.++-...+.+--..= .......|+.+++.++.+.|+++|+.|+.|-+-
T Consensus 74 L~~~~~wdyL~~LGV~~iwl~P~~~SGgi~g~~~tP~~D~gyDi~d-~~Idp~~GT~eDf~~L~~~Ah~~G~~vi~DlVp 152 (688)
T TIGR02455 74 LADDALWKALSEIGVQGIHNGPIKLSGGIRGREFTPSIDGNFDRIS-FDIDPLLGSEEELIQLSRMAAAHNAITIDDIIP 152 (688)
T ss_pred hcChHHHHHHHHhCCCEEEeCcceecccccccCCCCCCCCCCCccc-CccCcccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 345556677777888777663 323322221111111111100001 123345899999999999999999999999774
No 484
>PLN02347 GMP synthetase
Probab=24.77 E-value=6.8e+02 Score=27.41 Aligned_cols=111 Identities=13% Similarity=0.105 Sum_probs=58.1
Q ss_pred CCceeeeecCCCCccc-HHHHHHHHHHhhcccCCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHH
Q 009181 128 GKCSGTVYIGGSEAEG-HFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTES 206 (541)
Q Consensus 128 ~~~~g~~y~~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a 206 (541)
.+++|-.|++....+. -..++.+.+.+.+..++ +|... ....+..+.+.+.++.... ..+..|||-.|
T Consensus 174 ~~i~GvQFHPE~~~t~~G~~iL~NFl~~ic~~~~-~~~~~----~~~~~~i~~i~~~~~~~~~------vvvalSGGVDS 242 (536)
T PLN02347 174 RRIYGLQYHPEVTHSPKGMETLRHFLFDVCGVTA-DWKMQ----DVLEEQIELIKATVGPDEH------VICALSGGVDS 242 (536)
T ss_pred CCEEEEEccCCCCccchHHHHHHHHHHHHhCcCC-CcCcc----hHHHHHHHHHHHHhccCCe------EEEEecCChhH
Confidence 4567777776554211 13445555544444432 12211 1222234455556664332 22678999988
Q ss_pred HHHHHHHHHHHHHhhcCCCCCe---EEecCCccc--hH----HHHHhhcCCeEEEeeCCC
Q 009181 207 ILLAVKSSRDYMRNKRGITRPE---MIIPVSAHS--AY----DKAAQYFNIKLWRVPVDK 257 (541)
Q Consensus 207 ~~~al~a~r~~~~~~~Gi~~~~---vi~~~~~h~--s~----~ka~~~~G~~v~~v~~~~ 257 (541)
..+|..+.+. -| ++ |.+...... .. ...++.+|++++.++.++
T Consensus 243 svla~l~~~a-----lG---~~v~av~id~g~~~~~E~~~~~~~~a~~lgi~~~vvd~~e 294 (536)
T PLN02347 243 TVAATLVHKA-----IG---DRLHCVFVDNGLLRYKEQERVMETFKRDLHLPVTCVDASE 294 (536)
T ss_pred HHHHHHHHHH-----hC---CcEEEEEEeCCCCChhHHHHHHHHHHHHcCCcEEEEeCcH
Confidence 8888887653 23 22 344432222 22 334567799999988764
No 485
>PF07373 CAMP_factor: CAMP factor (Cfa); InterPro: IPR010860 This family consists of several bacterial CAMP factor (Cfa) proteins, which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin) [].
Probab=24.77 E-value=98 Score=29.45 Aligned_cols=35 Identities=26% Similarity=0.284 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCCCCCCCCcchhhh
Q 009181 484 HVAVVDVFLRDLRESVETVKQNPGPANGSLAPIYG 518 (541)
Q Consensus 484 ~~e~id~~i~~L~~~~~~l~~~~~~~~~~~~~~yg 518 (541)
+.+++..-+++|+...+++.+-|+..+++.|.+|=
T Consensus 126 t~~ql~~~i~~l~~~~~kv~~yPDL~~~D~ATiYv 160 (228)
T PF07373_consen 126 TVDQLKDEIEALKALLEKVLQYPDLTPTDVATIYV 160 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCccchhHHHH
Confidence 34999999999999999999999999999999994
No 486
>cd06282 PBP1_GntR_like_2 Ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. This group includes the ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding
Probab=24.68 E-value=3e+02 Score=26.03 Aligned_cols=66 Identities=8% Similarity=-0.004 Sum_probs=38.0
Q ss_pred HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEE-EeC
Q 009181 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH-VDL 310 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lh-vD~ 310 (541)
+.++++..|..+.....+.+..-..+.+++++..++..+++...+. +. .+..+.+++.|++++ +|.
T Consensus 21 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiii~~~~~-----~~-~~~~~~~~~~~ipvV~~~~ 87 (266)
T cd06282 21 IQEEARAAGYSLLLATTDYDAEREADAVETLLRQRVDGLILTVADA-----AT-SPALDLLDAERVPYVLAYN 87 (266)
T ss_pred HHHHHHHCCCEEEEeeCCCCHHHHHHHHHHHHhcCCCEEEEecCCC-----Cc-hHHHHHHhhCCCCEEEEec
Confidence 4456667788888776543222223445555666777777654331 11 235567778898864 443
No 487
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=24.55 E-value=1.6e+02 Score=29.63 Aligned_cols=54 Identities=15% Similarity=0.191 Sum_probs=37.1
Q ss_pred CccCHHHHHHhhcc-----CceEEEeecCCCCCcccc-CHHHHHHHHHHcCCEEEEeCCc
Q 009181 259 FRADVKAIKKYINR-----NTVLIVGSAPGFPHGIID-PIQELGELALSHGTCLHVDLCL 312 (541)
Q Consensus 259 ~~~d~~~Le~~i~~-----~t~~vv~~~~~~~~G~id-~i~~I~~la~~~~i~lhvD~a~ 312 (541)
..++.+++++.++. ...-+++-+++-|-|.-. ...+|.++|++.|..+++|..-
T Consensus 109 p~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 109 PEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 35666666654432 122234456666778765 4799999999999999999874
No 488
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=24.27 E-value=6.8e+02 Score=26.50 Aligned_cols=71 Identities=15% Similarity=0.183 Sum_probs=43.6
Q ss_pred EEecCCcc-chHHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEE
Q 009181 229 MIIPVSAH-SAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH 307 (541)
Q Consensus 229 vi~~~~~h-~s~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lh 307 (541)
++..++.+ .++.+.+.-+|+++..+-+.... +.+ +.+..+.. .++|+.++.+++++++.-++
T Consensus 315 ai~~~~~~~~~l~~~l~elGm~v~~~~~~~~~----~~~-~~~~~~~~------------~~~D~~~l~~~i~~~~~dli 377 (432)
T TIGR01285 315 AIAAEPDLLAAWATFFTSMGAQIVAAVTTTGS----PLL-QKLPVETV------------VIGDLEDLEDLACAAGADLL 377 (432)
T ss_pred EEEcCHHHHHHHHHHHHHCCCEEEEEEeCCCC----HHH-HhCCcCcE------------EeCCHHHHHHHHhhcCCCEE
Confidence 34444444 45677778889999888775321 112 22222211 12578899999999988888
Q ss_pred EeCCcccch
Q 009181 308 VDLCLGGFV 316 (541)
Q Consensus 308 vD~a~gg~~ 316 (541)
.-..++-++
T Consensus 378 ig~s~~k~~ 386 (432)
T TIGR01285 378 ITNSHGRAL 386 (432)
T ss_pred EECcchHHH
Confidence 777766443
No 489
>PRK00074 guaA GMP synthase; Reviewed
Probab=23.64 E-value=9.6e+02 Score=26.02 Aligned_cols=154 Identities=18% Similarity=0.121 Sum_probs=76.1
Q ss_pred CCceeeeecCCCCcccHHHHHHHHHHhhccc-CCCCcccchHHHHHHHHHHHHHHHHhCCCCCCCCCccceEEcCcHHHH
Q 009181 128 GKCSGTVYIGGSEAEGHFSLINEACSMFAHT-NPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTES 206 (541)
Q Consensus 128 ~~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~-n~~~~~~~~~~~~~e~ev~~~la~l~g~~~~~~~~~v~G~~t~Ggt~a 206 (541)
.+++|-.|++... +...=.+.+..|+.. -...... ....+..+..+.+.+.++- .. +.+..|||-.|
T Consensus 161 ~~i~GvQFHPE~~---~t~~G~~il~nFl~~i~~~~~~~--~~~~~~~~~~~~l~~~v~~--~~-----vlva~SGGvDS 228 (511)
T PRK00074 161 RKFYGVQFHPEVT---HTPQGKKLLENFVFDICGCKGDW--TMENFIEEAIEEIREQVGD--KK-----VILGLSGGVDS 228 (511)
T ss_pred CCEEEEeCCCCcC---CchhHHHHHHHHHHHhcCCCCCc--cHHHHHHHHHHHHHHhcCC--Cc-----EEEEeCCCccH
Confidence 4577777776654 221222333433311 1111111 1234555666777777764 22 33778999888
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeE---EecCCccc--h---HH-HHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEE
Q 009181 207 ILLAVKSSRDYMRNKRGITRPEM---IIPVSAHS--A---YD-KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLI 277 (541)
Q Consensus 207 ~~~al~a~r~~~~~~~Gi~~~~v---i~~~~~h~--s---~~-ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~v 277 (541)
..++..+.+. .| .++ .+....+. . .. ..++.+|+++..++.++.+. +.++..-+++.+.-
T Consensus 229 ~vll~ll~~~-----lg---~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vvd~~~~f~---~~l~g~~~~~~~r~ 297 (511)
T PRK00074 229 SVAAVLLHKA-----IG---DQLTCVFVDHGLLRKNEAEQVMEMFREHFGLNLIHVDASDRFL---SALAGVTDPEEKRK 297 (511)
T ss_pred HHHHHHHHHH-----hC---CceEEEEEeCCCCCHHHHHHHHHHHHHHcCCcEEEEccHHHHH---HhccCCCCcHHhhh
Confidence 8777766542 23 222 33322222 1 22 24567899888887642110 11100000000000
Q ss_pred EeecCCCCCccccCHHHHHHHHHHc-CCEEEEeCCc
Q 009181 278 VGSAPGFPHGIIDPIQELGELALSH-GTCLHVDLCL 312 (541)
Q Consensus 278 v~~~~~~~~G~id~i~~I~~la~~~-~i~lhvD~a~ 312 (541)
..|.. =...+.++++++ |+..+++|..
T Consensus 298 -------~~~~~-~~~~~~~~a~~~~g~~~latGhn 325 (511)
T PRK00074 298 -------IIGRE-FIEVFEEEAKKLGGVKFLAQGTL 325 (511)
T ss_pred -------hhhHH-HHHHHHHHHHHccCCCEEEECCC
Confidence 00100 045678889999 9999999973
No 490
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=23.46 E-value=3.3e+02 Score=22.45 Aligned_cols=69 Identities=4% Similarity=-0.104 Sum_probs=47.8
Q ss_pred HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhc-cCceEEEeecCCCCCccccCHHHHHHHHHHc--CCEEEEeCCcc
Q 009181 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDPIQELGELALSH--GTCLHVDLCLG 313 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~-~~t~~vv~~~~~~~~G~id~i~~I~~la~~~--~i~lhvD~a~g 313 (541)
+...++..|.++..+..+ .+.+++.+.+. .++.+|.++... +.......++++..++. ++.+++=|.+.
T Consensus 20 la~~l~~~G~~v~~~d~~----~~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 20 LAAYLRKAGHEVDILDAN----VPPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp HHHHHHHTTBEEEEEESS----B-HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred HHHHHHHCCCeEEEECCC----CCHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 444555668888888654 34577776664 567788887753 45566678888888776 78999888764
No 491
>cd06305 PBP1_methylthioribose_binding_like Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.
Probab=23.39 E-value=2.9e+02 Score=26.27 Aligned_cols=68 Identities=13% Similarity=0.048 Sum_probs=38.4
Q ss_pred HHHHHhhcCCeEEEeeCCCCCccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEE-EeCC
Q 009181 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH-VDLC 311 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lh-vD~a 311 (541)
+.++++..|.++..+....+.....+.++..+..++-.+++..++. ....++.+.+++.|++++ +|..
T Consensus 21 i~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~vdgii~~~~~~-----~~~~~~i~~~~~~~ipvV~~~~~ 89 (273)
T cd06305 21 TKAEAEALGGDLRVYDAGGDDAKQADQIDQAIAQKVDAIIIQHGRA-----EVLKPWVKRALDAGIPVVAFDVD 89 (273)
T ss_pred HHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCh-----hhhHHHHHHHHHcCCCEEEecCC
Confidence 4556777788887765432222233555666666777777765432 122344455677887654 4443
No 492
>PRK06450 threonine synthase; Validated
Probab=23.26 E-value=7.5e+02 Score=25.14 Aligned_cols=51 Identities=20% Similarity=0.272 Sum_probs=38.3
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~ 255 (541)
+..|+|..+..+|..+++ .|++ -.|++|...-..-...++.+|++++.++-
T Consensus 101 v~aSsGN~g~slA~~aa~------~G~~-~~i~vP~~~~~~k~~~i~~~GA~vi~v~~ 151 (338)
T PRK06450 101 SEDSSGNAGASIAAYGAA------AGIE-VKIFVPETASGGKLKQIESYGAEVVRVRG 151 (338)
T ss_pred EEECCcHHHHHHHHHHHH------cCCC-EEEEEcCCCCHHHHHHHHHcCCEEEEECC
Confidence 566667777777777665 3432 46889988777777888999999999874
No 493
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=23.21 E-value=4.3e+02 Score=21.82 Aligned_cols=65 Identities=12% Similarity=-0.072 Sum_probs=39.0
Q ss_pred hhcCCeEEEeeCCCC-CccCHHHHHHhhcc-CceEEEeecCC--CCCccccCHHHHHHHHHHcCCEEEEeCC
Q 009181 244 QYFNIKLWRVPVDKE-FRADVKAIKKYINR-NTVLIVGSAPG--FPHGIIDPIQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 244 ~~~G~~v~~v~~~~~-~~~d~~~Le~~i~~-~t~~vv~~~~~--~~~G~id~i~~I~~la~~~~i~lhvD~a 311 (541)
+-.|+++..|.--.. + + .++.+.|.+ .-+-+++..|+ .......+-..|...|.+++++++.+-.
T Consensus 39 ~~~Gi~~~~v~~~~~~g--~-~~i~~~i~~~g~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T~~~ 107 (112)
T cd00532 39 ADAGIPVRAVSKRHEDG--E-PTVDAAIAEKGKFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTTPNA 107 (112)
T ss_pred HHcCCceEEEEecCCCC--C-cHHHHHHhCCCCEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEECHH
Confidence 335776666543222 3 2 334555655 55544455444 2122456688999999999999997754
No 494
>PRK10717 cysteine synthase A; Provisional
Probab=22.86 E-value=4.2e+02 Score=26.76 Aligned_cols=52 Identities=19% Similarity=0.286 Sum_probs=41.2
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCccchHHHHHhhcCCeEEEeeCC
Q 009181 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (541)
Q Consensus 198 ~~t~Ggt~a~~~al~a~r~~~~~~~Gi~~~~vi~~~~~h~s~~ka~~~~G~~v~~v~~~ 256 (541)
+..|+|..+..+|..+.+ .|++ -.|++|...-......++.+|++++.++-+
T Consensus 68 v~aSsGN~g~alA~~a~~------~G~~-~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 68 VEGTAGNTGIGLALVAAA------RGYK-TVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred EEeCCcHHHHHHHHHHHH------cCCc-EEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 667788888888887765 4542 578999888777888999999999999853
No 495
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=22.78 E-value=2.3e+02 Score=23.98 Aligned_cols=50 Identities=14% Similarity=0.073 Sum_probs=38.0
Q ss_pred ccCHHHHHHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcCCEEEEeCC
Q 009181 260 RADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (541)
Q Consensus 260 ~~d~~~Le~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~i~lhvD~a 311 (541)
.++++++++.++.++-+|++-.+. .|...+-+++.+..++.|+-+.+-..
T Consensus 45 ~l~~~~l~~ll~~~peivliGTG~--~~~~~~~~~~~~~l~~~Gi~ve~m~T 94 (117)
T cd05126 45 GLQPEELEELLEEGVEVIVIGTGQ--SGALKVPPETVEKLEKRGVEVLVLPT 94 (117)
T ss_pred cCCHHHHHHHHhcCCCEEEEcCCC--CccccCCHHHHHHHHhcCCEEEEcCh
Confidence 579999999999888776665553 56655667888889999998887443
No 496
>PRK14705 glycogen branching enzyme; Provisional
Probab=22.77 E-value=65 Score=38.74 Aligned_cols=35 Identities=23% Similarity=0.200 Sum_probs=30.0
Q ss_pred cCCCCCccccCHHHHHHHHHHcCCEEEEeCCcccc
Q 009181 281 APGFPHGIIDPIQELGELALSHGTCLHVDLCLGGF 315 (541)
Q Consensus 281 ~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg~ 315 (541)
+|+...|+.++++++++.||+.||-|++|-++..+
T Consensus 806 ap~~ryGt~~dfk~lVd~~H~~GI~VILD~V~nH~ 840 (1224)
T PRK14705 806 APTSRFGHPDEFRFLVDSLHQAGIGVLLDWVPAHF 840 (1224)
T ss_pred CcCcccCCHHHHHHHHHHHHHCCCEEEEEeccccC
Confidence 44555778889999999999999999999998755
No 497
>PF09840 DUF2067: Uncharacterized protein conserved in archaea (DUF2067); InterPro: IPR019202 This family of archaeal proteins, have no known function.
Probab=22.59 E-value=5.2e+02 Score=23.98 Aligned_cols=118 Identities=16% Similarity=0.116 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEecCCCeeEEEEecCCCCHHHHHHHHHhCCceeccCCCCCeEEEEecCCCHHHH
Q 009181 409 YLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVV 488 (541)
Q Consensus 409 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~f~~~~~~~~~l~~~l~~~G~~~~~~~~~~~iRi~~~~~~~e~i 488 (541)
.++....+.+..+.++...... |+.-+.-.. ++--.-.+.+..-+.+.|...|....-.+. .++ |...-+++
T Consensus 47 ike~~~~Ik~~~~~vr~k~~~~-g~~~y~l~~--i~r~a~~~vp~d~L~~~L~~~G~~ae~~~~--~i~---T~a~~eev 118 (190)
T PF09840_consen 47 IKEAIRRIKELVRRVRSKYNKR-GLYRYSLDD--IFREAGYPVPPDLLVDALKLLGYKAEYRED--VIK---TDAPLEEV 118 (190)
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CceEEcHHH--HHHHcCCCCCHHHHHHHHHhCCCeeEEeCC--eEE---ecCCHHHH
Confidence 4555666666666666655433 322221100 000000234678899999999976543322 444 32334999
Q ss_pred HHHHHHHHHHHHHHHcCCCCC-CCCcchhhhhcCCCCChhHHHHHHH
Q 009181 489 DVFLRDLRESVETVKQNPGPA-NGSLAPIYGAAGRMPDRGMVNELLV 534 (541)
Q Consensus 489 d~~i~~L~~~~~~l~~~~~~~-~~~~~~~yg~~~~~~~~~~~~~~~~ 534 (541)
-+++++|.++.+++...|-.. ..-..+.|-.+-.+|-..++++.+.
T Consensus 119 ~~l~~~Lse~~~e~~~~~~~~~aK~vi~~~s~~~g~~p~evie~~~e 165 (190)
T PF09840_consen 119 VELAERLSEIYKELRFQPLGTKAKRVIAAVSYATGLDPEEVIEELLE 165 (190)
T ss_pred HHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCCHHHHHHHHHh
Confidence 999999999999998776432 2233566666666665566666543
No 498
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=22.46 E-value=56 Score=36.34 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=28.1
Q ss_pred cCCCCCccccCHHHHHHHHHHcCCEEEEeCCccc
Q 009181 281 APGFPHGIIDPIQELGELALSHGTCLHVDLCLGG 314 (541)
Q Consensus 281 ~~~~~~G~id~i~~I~~la~~~~i~lhvD~a~gg 314 (541)
.|..+++.+++++++++.||+.|+.|++|.++..
T Consensus 220 ~p~~~~~~~~efk~lV~~~H~~Gi~VilDvV~NH 253 (605)
T TIGR02104 220 NPYDPATRIRELKQMIQALHENGIRVIMDVVYNH 253 (605)
T ss_pred CCCccchHHHHHHHHHHHHHHCCCEEEEEEEcCC
Confidence 3445556678899999999999999999999743
No 499
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=22.45 E-value=6e+02 Score=23.23 Aligned_cols=82 Identities=13% Similarity=0.169 Sum_probs=43.4
Q ss_pred HHHHHHhhcCCCeEEecCCCe---eEEEEecC--CCCHHHHHHHHHhCCceeccCCCCCeE----------------E-E
Q 009181 421 ESIQKGIKEIPELFIIGRPDM---TIVAFGSD--VVDIFEVNDIMSSKGWHLNPLQRPNSI----------------H-I 478 (541)
Q Consensus 421 ~~l~~~L~~~~~~~v~~~~~~---~~v~f~~~--~~~~~~l~~~l~~~G~~~~~~~~~~~i----------------R-i 478 (541)
+.+.+.|++. ++.+...|.. ++|+-.-- ..+...++-.+-......-+-++||-+ . +
T Consensus 80 ~~~~~~L~~~-g~~~~~~p~i~iQNIVaSadL~~~lnL~~iA~~lg~e~~eYEPEqFPGLVYRl~~P~VV~LiF~SGK~V 158 (185)
T COG2101 80 KKLAKKLKDG-GIDIDFEPEIKVQNIVASADLGVELNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPRVVLLLFGSGKLV 158 (185)
T ss_pred HHHHHHHHhc-CcCcCCCCceEEEEEEEEeccCccccHHHHHHhccccccccccccCCeeEEEcCCCCEEEEEecCCcEE
Confidence 3444555553 6666666653 44433211 225555554444333333333444321 1 3
Q ss_pred EecCCCHHHHHHHHHHHHHHHHHHH
Q 009181 479 CVTLQHVAVVDVFLRDLRESVETVK 503 (541)
Q Consensus 479 ~~~~~~~e~id~~i~~L~~~~~~l~ 503 (541)
|.+..+++|+++.++.+.+-++++.
T Consensus 159 iTGaK~~ed~~~Av~~i~~~L~elg 183 (185)
T COG2101 159 ITGAKSEEDAEQAVEKIQSRLEELG 183 (185)
T ss_pred EecCCCHHHHHHHHHHHHHHHHHhc
Confidence 3444456999999999988887764
No 500
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=22.33 E-value=2.6e+02 Score=24.19 Aligned_cols=67 Identities=16% Similarity=-0.034 Sum_probs=47.0
Q ss_pred HHHHHhhcCCeEEEeeCCCCCccCHHHH-HHhhccCceEEEeecCCCCCccccCHHHHHHHHHHcC---CEEEEeCC
Q 009181 239 YDKAAQYFNIKLWRVPVDKEFRADVKAI-KKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHG---TCLHVDLC 311 (541)
Q Consensus 239 ~~ka~~~~G~~v~~v~~~~~~~~d~~~L-e~~i~~~t~~vv~~~~~~~~G~id~i~~I~~la~~~~---i~lhvD~a 311 (541)
+....+..|.+++....+ ..++.+ ++++++++-+|.+|+-. +.+...++++.+.+++.| +.+++=++
T Consensus 19 v~~~L~~~GfeVidLG~~----v~~e~~v~aa~~~~adiVglS~L~--t~~~~~~~~~~~~l~~~gl~~v~vivGG~ 89 (128)
T cd02072 19 LDHAFTEAGFNVVNLGVL----SPQEEFIDAAIETDADAILVSSLY--GHGEIDCKGLREKCDEAGLKDILLYVGGN 89 (128)
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEeccc--cCCHHHHHHHHHHHHHCCCCCCeEEEECC
Confidence 344566678899887765 344554 55667788888888875 456677889999998875 45666665
Done!