Citrus Sinensis ID: 009181

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-
MDFSSAKSSLIRFRASANSFLSQYEPVILLLAPLLTLLVARVLQSFLDAVREKGFKQTFVAFFMSSIKLVPGVNKYIEAEKQKVVDKMQSGVKSKREGWWTELPRAGLGVGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVETVKQNPGPANGSLAPIYGAAGRMPDRGMVNELLVNYMDSTC
ccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHcccccccccccccEEEcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccccccccEEEEcccHHHHHHHHHHHHHHHHHHccccccccEEECcccccHHHHHHHHcccEEEEEcccccccccHHHHHHHHcccEEEEEEEcccccccccccHHHHHHHHHHccccEEEEccccccHHHHHHHcccccccccccccccEEEEEccccccccccccEEEEEEccccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccEEEEEEcccccHHHHHHHHHHcccCCccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHccccc
********SLIRFRASANSFLSQYEPVILLLAPLLTLLVARVLQSFLDAVREKGFKQTFVAFFMSSIKLVPGVNKYIEAEKQKV***********REGWWTELPRAGLGVGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVE***************IYG*AGRMPDRGMVNELLVNYMDSTC
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MDFSSAKSSLIRFRASANSFLSQYEPVILLLAPLLTLLVARVLQSFLDAVREKGFKQTFVAFFMSSIKLVPGVNKYIEAEKQKVVDKMQSGVKSKREGWWTELPRAGLGVGVIEKLKEEKGKDVVWQGKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVETVKQNPGPANGSLAPIYGAAGRMPDRGMVNELLVNYMDSTC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Sphingosine-1-phosphate lyase Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine. Elevates stress-induced ceramide production and apoptosis.confidentQ52RG7
Sphingosine-1-phosphate lyase Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine. Elevates stress-induced ceramide production and apoptosis.confidentQ9C509
Sphingosine-1-phosphate lyase 1 Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine. Elevates stress-induced ceramide production and apoptosis.probableQ5R4G0

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.1.-.-Carbon-carbon lyases.probable
4.1.2.-Aldehyde-lyases.probable
4.1.2.27Sphinganine-1-phosphate aldolase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3MC6, chain A
Confidence level:very confident
Coverage over the Query: 96-505,527-541
View the alignment between query and template
View the model in PyMOL